locus-tag class description SD85_RS00005 PF00308 Bacterial dnaA protein SD85_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SD85_RS00005 PF11638 DnaA N-terminal domain SD85_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SD85_RS00010 PF02767 DNA polymerase III beta subunit, central domain SD85_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SD85_RS00020 PF02463 RecF/RecN/SMC N terminal domain SD85_RS00025 PF04025 Domain of unknown function (DUF370) SD85_RS00030 PF01751 Toprim domain SD85_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus SD85_RS00030 PF00204 DNA gyrase B SD85_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller SD85_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A SD85_RS00065 PF14175 YaaC-like Protein SD85_RS00070 PF00478 IMP dehydrogenase / GMP reductase domain SD85_RS00070 PF00571 CBS domain SD85_RS00075 PF07943 Penicillin-binding protein 5, C-terminal domain SD85_RS00075 PF00768 D-alanyl-D-alanine carboxypeptidase SD85_RS00080 PF01680 SOR/SNZ family SD85_RS00085 PF01174 SNO glutamine amidotransferase family SD85_RS00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SD85_RS00090 PF02403 Seryl-tRNA synthetase N-terminal domain SD85_RS00100 PF01712 Deoxynucleoside kinase SD85_RS00105 PF01712 Deoxynucleoside kinase SD85_RS00110 PF01476 LysM domain SD85_RS00110 PF00704 Glycosyl hydrolases family 18 SD85_RS00115 PF00857 Isochorismatase family SD85_RS00120 PF14437 MafB19-like deaminase SD85_RS00125 PF12169 DNA polymerase III subunits gamma and tau domain III SD85_RS00130 PF02575 YbaB/EbfC DNA-binding family SD85_RS00135 PF02132 RecR protein SD85_RS00135 PF13662 Toprim domain SD85_RS00140 PF10704 Protein of unknown function (DUF2508) SD85_RS00145 PF07441 SigmaK-factor processing regulatory protein BofA SD85_RS00175 PF10764 Inhibitor of sigma-G Gin SD85_RS00180 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein SD85_RS00185 PF05816 Toxic anion resistance protein (TelA) SD85_RS00190 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SD85_RS00190 PF01276 Orn/Lys/Arg decarboxylase, major domain SD85_RS00195 PF02223 Thymidylate kinase SD85_RS00200 PF06153 Cyclic-di-AMP receptor SD85_RS00205 PF03885 Protein of unknown function (DUF327) SD85_RS00210 PF09115 DNA polymerase III, delta subunit, C terminal SD85_RS00215 PF04468 PSP1 C-terminal conserved region SD85_RS00220 PF06156 Initiation control protein YabA SD85_RS00225 PF05175 Methyltransferase small domain SD85_RS00230 PF01541 GIY-YIG catalytic domain SD85_RS00235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SD85_RS00240 PF18277 AbrB C-terminal domain SD85_RS00240 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin SD85_RS00245 PF01588 Putative tRNA binding domain SD85_RS00245 PF09334 tRNA synthetases class I (M) SD85_RS00245 PF08264 Anticodon-binding domain of tRNA SD85_RS00250 PF01026 TatD related DNase SD85_RS00255 PF07501 G5 domain SD85_RS00255 PF03990 G5-linked-Ubiquitin-like domain SD85_RS00255 PF06725 3D domain SD85_RS00260 PF13331 Domain of unknown function (DUF4093) SD85_RS00260 PF13662 Toprim domain SD85_RS00265 PF00398 Ribosomal RNA adenine dimethylase SD85_RS00270 PF05582 YabG peptidase U57 SD85_RS00275 PF06257 Biofilm formation stimulator VEG SD85_RS00280 PF00269 Small, acid-soluble spore proteins, alpha/beta type SD85_RS00285 PF00288 GHMP kinases N terminal domain SD85_RS00285 PF08544 GHMP kinases C terminal SD85_RS00290 PF09182 Bacterial purine repressor, N-terminal SD85_RS00290 PF00156 Phosphoribosyl transferase domain SD85_RS00295 PF01042 Endoribonuclease L-PSP SD85_RS00300 PF04026 SpoVG SD85_RS00310 PF00132 Bacterial transferase hexapeptide (six repeats) SD85_RS00310 PF00483 Nucleotidyl transferase SD85_RS00315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SD85_RS00315 PF14572 Phosphoribosyl synthetase-associated domain SD85_RS00320 PF14693 Ribosomal protein TL5, C-terminal domain SD85_RS00320 PF01386 Ribosomal L25p family SD85_RS00325 PF01195 Peptidyl-tRNA hydrolase SD85_RS00330 PF10955 Protein of unknown function (DUF2757) SD85_RS00335 PF00270 DEAD/DEAH box helicase SD85_RS00335 PF02559 CarD-like/TRCF domain SD85_RS00335 PF00271 Helicase conserved C-terminal domain SD85_RS00335 PF03461 TRCF domain SD85_RS00335 PF17757 UvrB interaction domain SD85_RS00340 PF15714 Stage V sporulation protein T C-terminal, transcription factor SD85_RS00340 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin SD85_RS00345 PF01943 Polysaccharide biosynthesis protein SD85_RS00345 PF14667 Polysaccharide biosynthesis C-terminal domain SD85_RS00350 PF03819 MazG nucleotide pyrophosphohydrolase domain SD85_RS00350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SD85_RS00355 PF01479 S4 domain SD85_RS00360 PF07873 YabP family SD85_RS00365 PF09578 Spore cortex protein YabQ (Spore_YabQ) SD85_RS00370 PF04977 Septum formation initiator SD85_RS00375 PF00575 S1 RNA binding domain SD85_RS00390 PF07228 Stage II sporulation protein E (SpoIIE) SD85_RS00395 PF00092 von Willebrand factor type A domain SD85_RS00400 PF00069 Protein kinase domain SD85_RS00405 PF11734 TilS substrate C-terminal domain SD85_RS00405 PF09179 TilS substrate binding domain SD85_RS00405 PF01171 PP-loop family SD85_RS00410 PF00156 Phosphoribosyl transferase domain SD85_RS00415 PF17862 AAA+ lid domain SD85_RS00415 PF01434 Peptidase family M41 SD85_RS00415 PF00004 ATPase family associated with various cellular activities (AAA) SD85_RS00415 PF06480 FtsH Extracellular SD85_RS00420 PF03309 Type III pantothenate kinase SD85_RS00425 PF01430 Hsp33 protein SD85_RS00430 PF13145 PPIC-type PPIASE domain SD85_RS00435 PF00291 Pyridoxal-phosphate dependent enzyme SD85_RS00440 PF00425 chorismate binding enzyme SD85_RS00440 PF04715 Anthranilate synthase component I, N terminal region SD85_RS00445 PF00117 Glutamine amidotransferase class-I SD85_RS00450 PF01063 Amino-transferase class IV SD85_RS00455 PF00809 Pterin binding enzyme SD85_RS00460 PF02152 Dihydroneopterin aldolase SD85_RS00465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SD85_RS00470 PF01381 Helix-turn-helix SD85_RS00475 PF01207 Dihydrouridine synthase (Dus) SD85_RS00480 PF01336 OB-fold nucleic acid binding domain SD85_RS00480 PF00152 tRNA synthetases class II (D, K and N) SD85_RS00505 PF17727 CtsR C-terminal dimerization domain SD85_RS00505 PF05848 CtsR N-terminal HTH domain SD85_RS00510 PF02151 UvrB/uvrC motif SD85_RS00515 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain SD85_RS00520 PF07724 AAA domain (Cdc48 subfamily) SD85_RS00520 PF17871 AAA lid domain SD85_RS00520 PF00004 ATPase family associated with various cellular activities (AAA) SD85_RS00520 PF10431 C-terminal, D2-small domain, of ClpB protein SD85_RS00520 PF02861 Clp amino terminal domain, pathogenicity island component SD85_RS00525 PF18073 Rubredoxin metal binding domain SD85_RS00530 PF02457 DisA bacterial checkpoint controller nucleotide-binding SD85_RS00530 PF10635 DisA bacterial checkpoint controller linker region SD85_RS00540 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SD85_RS00545 PF02542 YgbB family SD85_RS00550 PF00749 tRNA synthetases class I (E and Q), catalytic domain SD85_RS00560 PF00132 Bacterial transferase hexapeptide (six repeats) SD85_RS00560 PF06426 Serine acetyltransferase, N-terminal SD85_RS00565 PF09190 DALR domain SD85_RS00565 PF01406 tRNA synthetases class I (C) catalytic domain SD85_RS00570 PF00636 Ribonuclease III domain SD85_RS00575 PF00588 SpoU rRNA Methylase family SD85_RS00575 PF08032 RNA 2'-O ribose methyltransferase substrate binding SD85_RS00580 PF05991 YacP-like NYN domain SD85_RS00585 PF04542 Sigma-70 region 2 SD85_RS00585 PF08281 Sigma-70, region 4 SD85_RS00590 PF00471 Ribosomal protein L33 SD85_RS00595 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SD85_RS00600 PF02357 Transcription termination factor nusG SD85_RS00600 PF00467 KOW motif SD85_RS00605 PF03946 Ribosomal protein L11, N-terminal domain SD85_RS00605 PF00298 Ribosomal protein L11, RNA binding domain SD85_RS00610 PF00687 Ribosomal protein L1p/L10e family SD85_RS00615 PF00466 Ribosomal protein L10 SD85_RS00620 PF16320 Ribosomal protein L7/L12 dimerisation domain SD85_RS00620 PF00542 Ribosomal protein L7/L12 C-terminal domain SD85_RS00625 PF05175 Methyltransferase small domain SD85_RS00630 PF04560 RNA polymerase Rpb2, domain 7 SD85_RS00630 PF04563 RNA polymerase beta subunit SD85_RS00630 PF04561 RNA polymerase Rpb2, domain 2 SD85_RS00630 PF10385 RNA polymerase beta subunit external 1 domain SD85_RS00630 PF04565 RNA polymerase Rpb2, domain 3 SD85_RS00630 PF00562 RNA polymerase Rpb2, domain 6 SD85_RS00635 PF04998 RNA polymerase Rpb1, domain 5 SD85_RS00635 PF04983 RNA polymerase Rpb1, domain 3 SD85_RS00635 PF05000 RNA polymerase Rpb1, domain 4 SD85_RS00635 PF04997 RNA polymerase Rpb1, domain 1 SD85_RS00635 PF00623 RNA polymerase Rpb1, domain 2 SD85_RS00640 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SD85_RS00645 PF00164 Ribosomal protein S12/S23 SD85_RS00650 PF00177 Ribosomal protein S7p/S5e SD85_RS00655 PF03764 Elongation factor G, domain IV SD85_RS00655 PF14492 Elongation Factor G, domain II SD85_RS00655 PF00679 Elongation factor G C-terminus SD85_RS00655 PF03144 Elongation factor Tu domain 2 SD85_RS00655 PF00009 Elongation factor Tu GTP binding domain SD85_RS00660 PF03143 Elongation factor Tu C-terminal domain SD85_RS00660 PF03144 Elongation factor Tu domain 2 SD85_RS00660 PF00009 Elongation factor Tu GTP binding domain SD85_RS00665 PF12146 Serine aminopeptidase, S33 SD85_RS00670 PF00338 Ribosomal protein S10p/S20e SD85_RS00675 PF00297 Ribosomal protein L3 SD85_RS00680 PF00573 Ribosomal protein L4/L1 family SD85_RS00685 PF00276 Ribosomal protein L23 SD85_RS00690 PF00181 Ribosomal Proteins L2, RNA binding domain SD85_RS00690 PF03947 Ribosomal Proteins L2, C-terminal domain SD85_RS00695 PF00203 Ribosomal protein S19 SD85_RS00700 PF00237 Ribosomal protein L22p/L17e SD85_RS00705 PF00189 Ribosomal protein S3, C-terminal domain SD85_RS00705 PF07650 KH domain SD85_RS00710 PF00252 Ribosomal protein L16p/L10e SD85_RS00715 PF00831 Ribosomal L29 protein SD85_RS00720 PF00366 Ribosomal protein S17 SD85_RS00725 PF00238 Ribosomal protein L14p/L23e SD85_RS00730 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SD85_RS00730 PF00467 KOW motif SD85_RS00735 PF00673 ribosomal L5P family C-terminus SD85_RS00735 PF00281 Ribosomal protein L5 SD85_RS00740 PF00253 Ribosomal protein S14p/S29e SD85_RS00745 PF00410 Ribosomal protein S8 SD85_RS00750 PF00347 Ribosomal protein L6 SD85_RS00755 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SD85_RS00760 PF00333 Ribosomal protein S5, N-terminal domain SD85_RS00760 PF03719 Ribosomal protein S5, C-terminal domain SD85_RS00765 PF00327 Ribosomal protein L30p/L7e SD85_RS00770 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SD85_RS00775 PF00344 SecY translocase SD85_RS00780 PF05191 Adenylate kinase, active site lid SD85_RS00785 PF00557 Metallopeptidase family M24 SD85_RS00795 PF01176 Translation initiation factor 1A / IF-1 SD85_RS00800 PF00444 Ribosomal protein L36 SD85_RS00805 PF00416 Ribosomal protein S13/S18 SD85_RS00810 PF00411 Ribosomal protein S11 SD85_RS00815 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SD85_RS00815 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SD85_RS00815 PF01000 RNA polymerase Rpb3/RpoA insert domain SD85_RS00820 PF01196 Ribosomal protein L17 SD85_RS00825 PF00005 ABC transporter SD85_RS00830 PF00005 ABC transporter SD85_RS00835 PF02361 Cobalt transport protein SD85_RS00840 PF01416 tRNA pseudouridine synthase SD85_RS00845 PF00572 Ribosomal protein L13 SD85_RS00850 PF00380 Ribosomal protein S9/S16 SD85_RS00860 PF08241 Methyltransferase domain SD85_RS00865 PF10730 Protein of unknown function (DUF2521) SD85_RS00870 PF01520 N-acetylmuramoyl-L-alanine amidase SD85_RS00875 PF10609 NUBPL iron-transfer P-loop NTPase SD85_RS00880 PF17898 Spore germination GerD central core domain SD85_RS00885 PF14089 KinB-signalling pathway activation in sporulation SD85_RS00890 PF01522 Polysaccharide deacetylase SD85_RS00960 PF01740 STAS domain SD85_RS00960 PF00916 Sulfate permease family SD85_RS00965 PF01758 Sodium Bile acid symporter family SD85_RS00970 PF00756 Putative esterase SD85_RS00975 PF01032 FecCD transport family SD85_RS00980 PF01032 FecCD transport family SD85_RS00985 PF01497 Periplasmic binding protein SD85_RS00990 PF01497 Periplasmic binding protein SD85_RS00990 PF12833 Helix-turn-helix domain SD85_RS00995 PF07075 Protein of unknown function (DUF1343) SD85_RS01000 PF01915 Glycosyl hydrolase family 3 C-terminal domain SD85_RS01000 PF00933 Glycosyl hydrolase family 3 N terminal domain SD85_RS01005 PF00144 Beta-lactamase SD85_RS01010 PF00367 phosphotransferase system, EIIB SD85_RS01010 PF02378 Phosphotransferase system, EIIC SD85_RS01015 PF01418 Helix-turn-helix domain, rpiR family SD85_RS01015 PF01380 SIS domain SD85_RS01020 PF01380 SIS domain SD85_RS01030 PF04463 Protein of unknown function (DUF523) SD85_RS01060 PF04542 Sigma-70 region 2 SD85_RS01060 PF08281 Sigma-70, region 4 SD85_RS01065 PF13490 Putative zinc-finger SD85_RS01070 PF02457 DisA bacterial checkpoint controller nucleotide-binding SD85_RS01075 PF07949 YbbR-like protein SD85_RS01080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SD85_RS01080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SD85_RS01080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SD85_RS01080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SD85_RS01085 PF01380 SIS domain SD85_RS01090 PF00361 Proton-conducting membrane transporter SD85_RS01090 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SD85_RS01095 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) SD85_RS01110 PF10057 Uncharacterized conserved protein (DUF2294) SD85_RS01115 PF00561 alpha/beta hydrolase fold SD85_RS01120 PF00486 Transcriptional regulatory protein, C terminal SD85_RS01120 PF00072 Response regulator receiver domain SD85_RS01125 PF00512 His Kinase A (phospho-acceptor) domain SD85_RS01125 PF00672 HAMP domain SD85_RS01130 PF03466 LysR substrate binding domain SD85_RS01130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_RS01135 PF00291 Pyridoxal-phosphate dependent enzyme SD85_RS01140 PF02142 MGS-like domain SD85_RS01140 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SD85_RS01140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SD85_RS01145 PF07690 Major Facilitator Superfamily SD85_RS01155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SD85_RS01155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SD85_RS01160 PF00682 HMGL-like SD85_RS01160 PF07836 DmpG-like communication domain SD85_RS01180 PF00266 Aminotransferase class-V SD85_RS01205 PF00069 Protein kinase domain SD85_RS01215 PF16226 Domain of unknown function (DUF4885) SD85_RS01220 PF00324 Amino acid permease SD85_RS01225 PF17334 Minor curli fiber component A SD85_RS01230 PF17340 Family of unknown function (DUF5370) SD85_RS01235 PF00905 Penicillin binding protein transpeptidase domain SD85_RS01240 PF00067 Cytochrome P450 SD85_RS01250 PF02690 Na+/Pi-cotransporter SD85_RS01255 PF03009 Glycerophosphoryl diester phosphodiesterase family SD85_RS01260 PF07690 Major Facilitator Superfamily SD85_RS01265 PF10852 Protein of unknown function (DUF2651) SD85_RS01270 PF01047 MarR family SD85_RS01270 PF00583 Acetyltransferase (GNAT) family SD85_RS01275 PF07690 Major Facilitator Superfamily SD85_RS01290 PF00892 EamA-like transporter family SD85_RS01295 PF12833 Helix-turn-helix domain SD85_RS01295 PF02311 AraC-like ligand binding domain SD85_RS01300 PF02222 ATP-grasp domain SD85_RS01305 PF00089 Trypsin SD85_RS01310 PF10794 Protein of unknown function (DUF2606) SD85_RS01315 PF12697 Alpha/beta hydrolase family SD85_RS01320 PF01066 CDP-alcohol phosphatidyltransferase SD85_RS01325 PF09335 SNARE associated Golgi protein SD85_RS01330 PF02666 Phosphatidylserine decarboxylase SD85_RS01340 PF05139 Erythromycin esterase SD85_RS01345 PF00581 Rhodanese-like domain SD85_RS01345 PF12368 Rhodanase C-terminal SD85_RS01345 PF17773 UPF0176 acylphosphatase like domain SD85_RS01350 PF00375 Sodium:dicarboxylate symporter family SD85_RS01360 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SD85_RS01365 PF07702 UTRA domain SD85_RS01365 PF00392 Bacterial regulatory proteins, gntR family SD85_RS01370 PF07853 Protein of unknown function (DUF1648) SD85_RS01375 PF01063 Amino-transferase class IV SD85_RS01380 PF00324 Amino acid permease SD85_RS01385 PF02574 Homocysteine S-methyltransferase SD85_RS01395 PF01235 Sodium:alanine symporter family SD85_RS01400 PF04960 Glutaminase SD85_RS01405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS01410 PF08664 YcbB domain SD85_RS01410 PF00072 Response regulator receiver domain SD85_RS01415 PF00701 Dihydrodipicolinate synthetase family SD85_RS01420 PF00171 Aldehyde dehydrogenase family SD85_RS01425 PF07690 Major Facilitator Superfamily SD85_RS01430 PF13378 Enolase C-terminal domain-like SD85_RS01435 PF07729 FCD domain SD85_RS01435 PF00392 Bacterial regulatory proteins, gntR family SD85_RS01440 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus SD85_RS01440 PF08666 SAF domain SD85_RS01445 PF01636 Phosphotransferase enzyme family SD85_RS01455 PF00072 Response regulator receiver domain SD85_RS01455 PF00486 Transcriptional regulatory protein, C terminal SD85_RS01460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS01460 PF00512 His Kinase A (phospho-acceptor) domain SD85_RS01465 PF00005 ABC transporter SD85_RS01475 PF10710 Protein of unknown function (DUF2512) SD85_RS01485 PF07486 Cell Wall Hydrolase SD85_RS01490 PF10138 vWA found in TerF C terminus SD85_RS01500 PF09423 PhoD-like phosphatase SD85_RS01500 PF16655 PhoD-like phosphatase, N-terminal domain SD85_RS01505 PF02416 mttA/Hcf106 family SD85_RS01510 PF00902 Sec-independent protein translocase protein (TatC) SD85_RS01515 PF01470 Pyroglutamyl peptidase SD85_RS01520 PF00266 Aminotransferase class-V SD85_RS01525 PF07690 Major Facilitator Superfamily SD85_RS01530 PF00440 Bacterial regulatory proteins, tetR family SD85_RS01535 PF01674 Lipase (class 2) SD85_RS01540 PF06271 RDD family SD85_RS01545 PF02810 SEC-C motif SD85_RS01545 PF05225 helix-turn-helix, Psq domain SD85_RS01550 PF14501 GHKL domain SD85_RS01555 PF12679 ABC-2 family transporter protein SD85_RS01560 PF00248 Aldo/keto reductase family SD85_RS01565 PF17118 Domain of unknown function (DUF5105) SD85_RS01565 PF11611 Domain of unknown function (DUF4352) SD85_RS01570 PF16244 Domain of unknown function (DUF4901) SD85_RS01575 PF16244 Domain of unknown function (DUF4901) SD85_RS01585 PF13333 Integrase core domain SD85_RS01585 PF00665 Integrase core domain SD85_RS01585 PF13276 HTH-like domain SD85_RS01590 PF16244 Domain of unknown function (DUF4901) SD85_RS01595 PF13539 D-alanyl-D-alanine carboxypeptidase SD85_RS01600 PF18801 response regulator aspartate phosphatase H, N terminal SD85_RS01610 PF00128 Alpha amylase, catalytic domain SD85_RS01615 PF01297 Zinc-uptake complex component A periplasmic SD85_RS01620 PF00005 ABC transporter SD85_RS01625 PF00950 ABC 3 transport family SD85_RS01630 PF00296 Luciferase-like monooxygenase SD85_RS01635 PF02342 TerD domain SD85_RS01640 PF02342 TerD domain SD85_RS01645 PF02342 TerD domain SD85_RS01650 PF03741 Integral membrane protein TerC family SD85_RS01655 PF14266 Putative component of 'biosynthetic module' SD85_RS01660 PF05816 Toxic anion resistance protein (TelA) SD85_RS01665 PF07690 Major Facilitator Superfamily SD85_RS01675 PF00571 CBS domain SD85_RS01675 PF00005 ABC transporter SD85_RS01680 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS01685 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SD85_RS01690 PF01546 Peptidase family M20/M25/M40 SD85_RS01690 PF07687 Peptidase dimerisation domain SD85_RS01695 PF03606 C4-dicarboxylate anaerobic carrier SD85_RS01710 PF00128 Alpha amylase, catalytic domain SD85_RS01710 PF16738 Starch-binding module 26 SD85_RS01715 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SD85_RS01715 PF00056 lactate/malate dehydrogenase, NAD binding domain SD85_RS01720 PF02652 L-lactate permease SD85_RS01725 PF07690 Major Facilitator Superfamily SD85_RS01730 PF01047 MarR family SD85_RS01735 PF01810 LysE type translocator SD85_RS01740 PF08892 YqcI/YcgG family SD85_RS01745 PF00324 Amino acid permease SD85_RS01750 PF09347 Domain of unknown function (DUF1989) SD85_RS01755 PF02540 NAD synthase SD85_RS01765 PF01202 Shikimate kinase SD85_RS01770 PF08241 Methyltransferase domain SD85_RS01775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_RS01775 PF03466 LysR substrate binding domain SD85_RS01780 PF05448 Acetyl xylan esterase (AXE1) SD85_RS01785 PF10127 RNA repair pathway DNA polymerase beta family SD85_RS01790 PF01619 Proline dehydrogenase SD85_RS01795 PF00171 Aldehyde dehydrogenase family SD85_RS01800 PF00474 Sodium:solute symporter family SD85_RS01805 PF13556 PucR C-terminal helix-turn-helix domain SD85_RS01805 PF17853 GGDEF-like domain SD85_RS01810 PF09323 Domain of unknown function (DUF1980) SD85_RS01815 PF03773 Predicted permease SD85_RS01820 PF00561 alpha/beta hydrolase fold SD85_RS01825 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_RS01830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SD85_RS01835 PF00355 Rieske [2Fe-2S] domain SD85_RS01840 PF18267 Rubredoxin NAD+ reductase C-terminal domain SD85_RS01840 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_RS01840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SD85_RS01840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SD85_RS01840 PF04324 BFD-like [2Fe-2S] binding domain SD85_RS01845 PF00384 Molybdopterin oxidoreductase SD85_RS01845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SD85_RS01845 PF01568 Molydopterin dinucleotide binding domain SD85_RS01850 PF18267 Rubredoxin NAD+ reductase C-terminal domain SD85_RS01850 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_RS01850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SD85_RS01850 PF04324 BFD-like [2Fe-2S] binding domain SD85_RS01855 PF07690 Major Facilitator Superfamily SD85_RS01860 PF02649 Type I GTP cyclohydrolase folE2 SD85_RS01865 PF03734 L,D-transpeptidase catalytic domain SD85_RS01865 PF03734 L,D-transpeptidase catalytic domain SD85_RS01875 PF02492 CobW/HypB/UreG, nucleotide-binding domain SD85_RS01875 PF07683 Cobalamin synthesis protein cobW C-terminal domain SD85_RS01880 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS01885 PF00497 Bacterial extracellular solute-binding proteins, family 3 SD85_RS01895 PF06271 RDD family SD85_RS01900 PF10925 Protein of unknown function (DUF2680) SD85_RS01905 PF01047 MarR family SD85_RS01915 PF00005 ABC transporter SD85_RS01920 PF00232 Glycosyl hydrolase family 1 SD85_RS01925 PF11033 Competence protein J (ComJ) SD85_RS01930 PF14040 Deoxyribonuclease NucA/NucB SD85_RS01935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SD85_RS01935 PF17202 Single cache domain 3 SD85_RS01935 PF00672 HAMP domain SD85_RS01940 PF01380 SIS domain SD85_RS01945 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SD85_RS01950 PF01638 HxlR-like helix-turn-helix SD85_RS01960 PF00668 Condensation domain SD85_RS01960 PF13193 AMP-binding enzyme C-terminal domain SD85_RS01960 PF00550 Phosphopantetheine attachment site SD85_RS01960 PF00501 AMP-binding enzyme SD85_RS01965 PF00501 AMP-binding enzyme SD85_RS01965 PF13193 AMP-binding enzyme C-terminal domain SD85_RS01965 PF00668 Condensation domain SD85_RS01965 PF00550 Phosphopantetheine attachment site SD85_RS01970 PF13193 AMP-binding enzyme C-terminal domain SD85_RS01970 PF00668 Condensation domain SD85_RS01970 PF00550 Phosphopantetheine attachment site SD85_RS01970 PF00501 AMP-binding enzyme SD85_RS01970 PF00975 Thioesterase domain SD85_RS01975 PF00975 Thioesterase domain SD85_RS01980 PF07690 Major Facilitator Superfamily SD85_RS01985 PF14317 YcxB-like protein SD85_RS01990 PF00892 EamA-like transporter family SD85_RS01995 PF00392 Bacterial regulatory proteins, gntR family SD85_RS01995 PF00155 Aminotransferase class I and II SD85_RS02000 PF01648 4'-phosphopantetheinyl transferase superfamily SD85_RS02010 PF00005 ABC transporter SD85_RS02015 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS02020 PF00497 Bacterial extracellular solute-binding proteins, family 3 SD85_RS02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_RS02025 PF03466 LysR substrate binding domain SD85_RS02030 PF02441 Flavoprotein SD85_RS02035 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SD85_RS02050 PF00561 alpha/beta hydrolase fold SD85_RS02055 PF00854 POT family SD85_RS02060 PF13229 Right handed beta helix region SD85_RS02060 PF12708 Pectate lyase superfamily protein SD85_RS02070 PF03323 Bacillus/Clostridium GerA spore germination protein SD85_RS02075 PF05504 Spore germination B3/ GerAC like, C-terminal SD85_RS02080 PF03845 Spore germination protein SD85_RS02085 PF00005 ABC transporter SD85_RS02090 PF12704 MacB-like periplasmic core domain SD85_RS02090 PF02687 FtsX-like permease family SD85_RS02095 PF00486 Transcriptional regulatory protein, C terminal SD85_RS02095 PF00072 Response regulator receiver domain SD85_RS02100 PF00512 His Kinase A (phospho-acceptor) domain SD85_RS02100 PF00672 HAMP domain SD85_RS02100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS02105 PF18801 response regulator aspartate phosphatase H, N terminal SD85_RS02110 PF11131 Rap-phr extracellular signalling SD85_RS02115 PF09680 Family of unknown function SD85_RS02120 PF00696 Amino acid kinase family SD85_RS02120 PF13840 ACT domain SD85_RS02125 PF01032 FecCD transport family SD85_RS02130 PF01032 FecCD transport family SD85_RS02135 PF00005 ABC transporter SD85_RS02140 PF01497 Periplasmic binding protein SD85_RS02145 PF07690 Major Facilitator Superfamily SD85_RS02150 PF00440 Bacterial regulatory proteins, tetR family SD85_RS02155 PF00881 Nitroreductase family SD85_RS02160 PF03992 Antibiotic biosynthesis monooxygenase SD85_RS02165 PF01022 Bacterial regulatory protein, arsR family SD85_RS02170 PF00155 Aminotransferase class I and II SD85_RS02170 PF00392 Bacterial regulatory proteins, gntR family SD85_RS02175 PF00202 Aminotransferase class-III SD85_RS02180 PF00171 Aldehyde dehydrogenase family SD85_RS02185 PF06800 Sugar transport protein SD85_RS02195 PF07987 Domain of unkown function (DUF1775) SD85_RS02200 PF13115 YtkA-like SD85_RS02200 PF05425 Copper resistance protein D SD85_RS02200 PF04234 CopC domain SD85_RS02205 PF08220 DeoR-like helix-turn-helix domain SD85_RS02205 PF05573 NosL SD85_RS02215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SD85_RS02215 PF02378 Phosphotransferase system, EIIC SD85_RS02220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SD85_RS02225 PF01232 Mannitol dehydrogenase Rossmann domain SD85_RS02225 PF08125 Mannitol dehydrogenase C-terminal domain SD85_RS02230 PF00180 Isocitrate/isopropylmalate dehydrogenase SD85_RS02235 PF10502 Signal peptidase, peptidase S26 SD85_RS02240 PF01738 Dienelactone hydrolase family SD85_RS02245 PF07977 FabA-like domain SD85_RS02260 PF03746 LamB/YcsF family SD85_RS02265 PF01566 Natural resistance-associated macrophage protein SD85_RS02270 PF07286 Protein of unknown function (DUF1445) SD85_RS02275 PF02682 Carboxyltransferase domain, subdomain C and D SD85_RS02280 PF02626 Carboxyltransferase domain, subdomain A and B SD85_RS02285 PF01614 Bacterial transcriptional regulator SD85_RS02285 PF09339 IclR helix-turn-helix domain SD85_RS02290 PF13472 GDSL-like Lipase/Acylhydrolase family SD85_RS02295 PF13129 Protein of unknown function (DUF3953) SD85_RS02300 PF03992 Antibiotic biosynthesis monooxygenase SD85_RS02305 PF05223 NTF2-like N-terminal transpeptidase domain SD85_RS02305 PF00905 Penicillin binding protein transpeptidase domain SD85_RS02305 PF03717 Penicillin-binding Protein dimerisation domain SD85_RS02310 PF00248 Aldo/keto reductase family SD85_RS02315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SD85_RS02315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SD85_RS02315 PF00874 PRD domain SD85_RS02315 PF05043 Mga helix-turn-helix domain SD85_RS02315 PF08279 HTH domain SD85_RS02320 PF13193 AMP-binding enzyme C-terminal domain SD85_RS02320 PF00501 AMP-binding enzyme SD85_RS02325 PF13649 Methyltransferase domain SD85_RS02340 PF13302 Acetyltransferase (GNAT) domain SD85_RS02345 PF16242 Pyridoxamine 5'-phosphate oxidase like SD85_RS02350 PF10997 Alternate to MurJ SD85_RS02355 PF12823 Domain of unknown function (DUF3817) SD85_RS02360 PF01037 Lrp/AsnC ligand binding domain SD85_RS02365 PF01751 Toprim domain SD85_RS02365 PF01131 DNA topoisomerase SD85_RS02375 PF00990 Diguanylate cyclase, GGDEF domain SD85_RS02380 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) SD85_RS02390 PF03170 Bacterial cellulose synthase subunit SD85_RS02395 PF13520 Amino acid permease SD85_RS02400 PF00293 NUDIX domain SD85_RS02405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SD85_RS02405 PF00205 Thiamine pyrophosphate enzyme, central domain SD85_RS02405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SD85_RS02415 PF01566 Natural resistance-associated macrophage protein SD85_RS02420 PF04226 Transglycosylase associated protein SD85_RS02425 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) SD85_RS02430 PF12787 EcsC protein family SD85_RS02435 PF10685 Stress-induced bacterial acidophilic repeat motif SD85_RS02435 PF00477 Small hydrophilic plant seed protein SD85_RS02445 PF16291 Domain of unknown function (DUF4937 SD85_RS02450 PF05067 Manganese containing catalase SD85_RS02455 PF03480 Bacterial extracellular solute-binding protein, family 7 SD85_RS02460 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SD85_RS02460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS02460 PF17203 Single cache domain 3 SD85_RS02465 PF08279 HTH domain SD85_RS02465 PF00072 Response regulator receiver domain SD85_RS02470 PF00375 Sodium:dicarboxylate symporter family SD85_RS02475 PF01594 AI-2E family transporter SD85_RS02480 PF00375 Sodium:dicarboxylate symporter family SD85_RS02485 PF00005 ABC transporter SD85_RS02500 PF08028 Acyl-CoA dehydrogenase, C-terminal domain SD85_RS02500 PF02770 Acyl-CoA dehydrogenase, middle domain SD85_RS02500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SD85_RS02505 PF13040 Fur-regulated basic protein B SD85_RS02515 PF01545 Cation efflux family SD85_RS02515 PF16916 Dimerisation domain of Zinc Transporter SD85_RS02520 PF00085 Thioredoxin SD85_RS02525 PF01820 D-ala D-ala ligase N-terminus SD85_RS02525 PF07478 D-ala D-ala ligase C-terminus SD85_RS02530 PF02875 Mur ligase family, glutamate ligase domain SD85_RS02530 PF08245 Mur ligase middle domain SD85_RS02530 PF01225 Mur ligase family, catalytic domain SD85_RS02535 PF00270 DEAD/DEAH box helicase SD85_RS02535 PF00271 Helicase conserved C-terminal domain SD85_RS02540 PF03703 Bacterial PH domain SD85_RS02545 PF03703 Bacterial PH domain SD85_RS02550 PF01694 Rhomboid family SD85_RS02555 PF01648 4'-phosphopantetheinyl transferase superfamily SD85_RS02565 PF00842 Alanine racemase, C-terminal domain SD85_RS02565 PF01168 Alanine racemase, N-terminal domain SD85_RS02570 PF01402 Ribbon-helix-helix protein, copG family SD85_RS02575 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system SD85_RS02580 PF08678 Rsbr N terminal SD85_RS02580 PF01740 STAS domain SD85_RS02585 PF01740 STAS domain SD85_RS02590 PF13581 Histidine kinase-like ATPase domain SD85_RS02595 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain SD85_RS02595 PF07228 Stage II sporulation protein E (SpoIIE) SD85_RS02600 PF01740 STAS domain SD85_RS02605 PF13581 Histidine kinase-like ATPase domain SD85_RS02610 PF04542 Sigma-70 region 2 SD85_RS02610 PF04545 Sigma-70, region 4 SD85_RS02610 PF04539 Sigma-70 region 3 SD85_RS02615 PF07228 Stage II sporulation protein E (SpoIIE) SD85_RS02620 PF09371 Tex-like protein N-terminal domain SD85_RS02620 PF16921 Tex protein YqgF-like domain SD85_RS02620 PF00575 S1 RNA binding domain SD85_RS02620 PF17674 HHH domain SD85_RS02630 PF10263 SprT-like family SD85_RS02630 PF17283 SprT-like zinc ribbon domain SD85_RS02675 PF13411 MerR HTH family regulatory protein SD85_RS02680 PF00106 short chain dehydrogenase SD85_RS02685 PF00248 Aldo/keto reductase family SD85_RS02690 PF00106 short chain dehydrogenase SD85_RS02705 PF00106 short chain dehydrogenase SD85_RS02710 PF00487 Fatty acid desaturase SD85_RS02715 PF00313 'Cold-shock' DNA-binding domain SD85_RS02720 PF02559 CarD-like/TRCF domain SD85_RS02730 PF01381 Helix-turn-helix SD85_RS02735 PF06445 GyrI-like small molecule binding domain SD85_RS02735 PF12833 Helix-turn-helix domain SD85_RS02745 PF08818 Domain of unknown function (DU1801) SD85_RS02760 PF12706 Beta-lactamase superfamily domain SD85_RS02765 PF01037 Lrp/AsnC ligand binding domain SD85_RS02770 PF00892 EamA-like transporter family SD85_RS02775 PF00155 Aminotransferase class I and II SD85_RS02775 PF00392 Bacterial regulatory proteins, gntR family SD85_RS02780 PF01575 MaoC like domain SD85_RS02785 PF06821 Serine hydrolase SD85_RS02790 PF01638 HxlR-like helix-turn-helix SD85_RS02795 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SD85_RS02795 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SD85_RS02805 PF01022 Bacterial regulatory protein, arsR family SD85_RS02810 PF02040 Arsenical pump membrane protein SD85_RS02815 PF01451 Low molecular weight phosphotyrosine protein phosphatase SD85_RS02820 PF12746 GNAT acetyltransferase SD85_RS02825 PF00892 EamA-like transporter family SD85_RS02830 PF00392 Bacterial regulatory proteins, gntR family SD85_RS02830 PF00155 Aminotransferase class I and II SD85_RS02835 PF01613 Flavin reductase like domain SD85_RS02845 PF02627 Carboxymuconolactone decarboxylase family SD85_RS02860 PF07730 Histidine kinase SD85_RS02860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS02865 PF00072 Response regulator receiver domain SD85_RS02865 PF00196 Bacterial regulatory proteins, luxR family SD85_RS02870 PF03176 MMPL family SD85_RS02880 PF03591 AzlC protein SD85_RS02885 PF05525 Branched-chain amino acid transport protein SD85_RS02895 PF04474 Protein of unknown function (DUF554) SD85_RS02900 PF06445 GyrI-like small molecule binding domain SD85_RS02900 PF13411 MerR HTH family regulatory protein SD85_RS02905 PF01545 Cation efflux family SD85_RS02905 PF16916 Dimerisation domain of Zinc Transporter SD85_RS02910 PF00881 Nitroreductase family SD85_RS02915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_RS02920 PF07681 DoxX SD85_RS02925 PF00085 Thioredoxin SD85_RS02930 PF00392 Bacterial regulatory proteins, gntR family SD85_RS02930 PF00155 Aminotransferase class I and II SD85_RS02945 PF01596 O-methyltransferase SD85_RS02950 PF04239 Protein of unknown function (DUF421) SD85_RS02955 PF00011 Hsp20/alpha crystallin family SD85_RS02960 PF10676 Spore germination protein gerPA/gerPF SD85_RS02965 PF10676 Spore germination protein gerPA/gerPF SD85_RS02970 PF00440 Bacterial regulatory proteins, tetR family SD85_RS02975 PF13564 DoxX-like family SD85_RS02980 PF00583 Acetyltransferase (GNAT) family SD85_RS02990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SD85_RS02990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SD85_RS02995 PF00356 Bacterial regulatory proteins, lacI family SD85_RS03000 PF00083 Sugar (and other) transporter SD85_RS03005 PF00083 Sugar (and other) transporter SD85_RS03010 PF00083 Sugar (and other) transporter SD85_RS03015 PF01261 Xylose isomerase-like TIM barrel SD85_RS03020 PF07690 Major Facilitator Superfamily SD85_RS03030 PF00005 ABC transporter SD85_RS03030 PF12848 ABC transporter SD85_RS03035 PF00324 Amino acid permease SD85_RS03040 PF05163 DinB family SD85_RS03045 PF01047 MarR family SD85_RS03050 PF03176 MMPL family SD85_RS03055 PF00881 Nitroreductase family SD85_RS03060 PF01047 MarR family SD85_RS03065 PF01381 Helix-turn-helix SD85_RS03065 PF07883 Cupin domain SD85_RS03080 PF07690 Major Facilitator Superfamily SD85_RS03085 PF01925 Sulfite exporter TauE/SafE SD85_RS03090 PF00392 Bacterial regulatory proteins, gntR family SD85_RS03090 PF07729 FCD domain SD85_RS03095 PF00704 Glycosyl hydrolases family 18 SD85_RS03095 PF01476 LysM domain SD85_RS03100 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase SD85_RS03110 PF08139 Prokaryotic membrane lipoprotein lipid attachment site SD85_RS03110 PF11611 Domain of unknown function (DUF4352) SD85_RS03115 PF00245 Alkaline phosphatase SD85_RS03120 PF16302 Domain of unknown function (DUF4944) SD85_RS03125 PF00583 Acetyltransferase (GNAT) family SD85_RS03130 PF01966 HD domain SD85_RS03135 PF07563 Protein of unknown function (DUF1541) SD85_RS03140 PF07690 Major Facilitator Superfamily SD85_RS03145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SD85_RS03150 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SD85_RS03155 PF02378 Phosphotransferase system, EIIC SD85_RS03160 PF00232 Glycosyl hydrolase family 1 SD85_RS03165 PF07702 UTRA domain SD85_RS03165 PF00392 Bacterial regulatory proteins, gntR family SD85_RS03170 PF00480 ROK family SD85_RS03175 PF01238 Phosphomannose isomerase type I SD85_RS03180 PF02156 Glycosyl hydrolase family 26 SD85_RS03225 PF02769 AIR synthase related protein, C-terminal domain SD85_RS03225 PF00586 AIR synthase related protein, N-terminal domain SD85_RS03230 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SD85_RS03235 PF00814 Glycoprotease family SD85_RS03240 PF00583 Acetyltransferase (GNAT) family SD85_RS03245 PF00814 Glycoprotease family SD85_RS03250 PF00005 ABC transporter SD85_RS03250 PF16326 ABC transporter C-terminal domain SD85_RS03250 PF12848 ABC transporter SD85_RS03255 PF01967 MoaC family SD85_RS03260 PF06971 Putative DNA-binding protein N-terminus SD85_RS03260 PF02629 CoA binding domain SD85_RS03265 PF02416 mttA/Hcf106 family SD85_RS03270 PF00902 Sec-independent protein translocase protein (TatC) SD85_RS03275 PF14146 Domain of unknown function (DUF4305) SD85_RS03280 PF02517 CPBP intramembrane metalloprotease SD85_RS03285 PF00166 Chaperonin 10 Kd subunit SD85_RS03290 PF00118 TCP-1/cpn60 chaperonin family SD85_RS03300 PF13176 Tetratricopeptide repeat SD85_RS03300 PF00931 NB-ARC domain SD85_RS03305 PF00107 Zinc-binding dehydrogenase SD85_RS03305 PF08240 Alcohol dehydrogenase GroES-like domain SD85_RS03315 PF00294 pfkB family carbohydrate kinase SD85_RS03320 PF04012 PspA/IM30 family SD85_RS03325 PF08271 TFIIB zinc-binding SD85_RS03330 PF04536 TPM domain SD85_RS03335 PF13421 SPFH domain-Band 7 family SD85_RS03340 PF07885 Ion channel SD85_RS03345 PF00083 Sugar (and other) transporter SD85_RS03350 PF00107 Zinc-binding dehydrogenase SD85_RS03350 PF08240 Alcohol dehydrogenase GroES-like domain SD85_RS03355 PF03330 Lytic transglycolase SD85_RS03360 PF07676 WD40-like Beta Propeller Repeat SD85_RS03370 PF13276 HTH-like domain SD85_RS03370 PF00665 Integrase core domain SD85_RS03370 PF13333 Integrase core domain SD85_RS03380 PF14169 Cold-inducible protein YdjO SD85_RS03385 PF12697 Alpha/beta hydrolase family SD85_RS03390 PF13170 Protein of unknown function (DUF4003) SD85_RS03395 PF07732 Multicopper oxidase SD85_RS03395 PF07731 Multicopper oxidase SD85_RS03395 PF00394 Multicopper oxidase SD85_RS03400 PF00324 Amino acid permease SD85_RS03410 PF01545 Cation efflux family SD85_RS03410 PF16916 Dimerisation domain of Zinc Transporter SD85_RS03415 PF07726 ATPase family associated with various cellular activities (AAA) SD85_RS03415 PF17863 AAA lid domain SD85_RS03420 PF01882 Protein of unknown function DUF58 SD85_RS03425 PF01841 Transglutaminase-like superfamily SD85_RS03425 PF13559 Domain of unknown function (DUF4129) SD85_RS03425 PF11992 Domain of unknown function (DUF3488) SD85_RS03430 PF02540 NAD synthase SD85_RS03430 PF00958 GMP synthase C terminal domain SD85_RS03430 PF00117 Glutamine amidotransferase class-I SD85_RS03435 PF00860 Permease family SD85_RS03445 PF13076 Fur-regulated basic protein A SD85_RS03450 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SD85_RS03455 PF14044 NETI protein SD85_RS03460 PF00731 AIR carboxylase SD85_RS03465 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SD85_RS03465 PF02222 ATP-grasp domain SD85_RS03470 PF00206 Lyase SD85_RS03470 PF10397 Adenylosuccinate lyase C-terminus SD85_RS03475 PF01259 SAICAR synthetase SD85_RS03480 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase SD85_RS03490 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SD85_RS03490 PF02769 AIR synthase related protein, C-terminal domain SD85_RS03490 PF00586 AIR synthase related protein, N-terminal domain SD85_RS03495 PF00156 Phosphoribosyl transferase domain SD85_RS03500 PF00586 AIR synthase related protein, N-terminal domain SD85_RS03500 PF02769 AIR synthase related protein, C-terminal domain SD85_RS03505 PF00551 Formyl transferase SD85_RS03510 PF02142 MGS-like domain SD85_RS03510 PF01808 AICARFT/IMPCHase bienzyme SD85_RS03515 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SD85_RS03515 PF02843 Phosphoribosylglycinamide synthetase, C domain SD85_RS03515 PF02844 Phosphoribosylglycinamide synthetase, N domain SD85_RS03520 PF01037 Lrp/AsnC ligand binding domain SD85_RS03525 PF13520 Amino acid permease SD85_RS03530 PF11127 Protein of unknown function (DUF2892) SD85_RS03535 PF13382 Adenine deaminase C-terminal domain SD85_RS03535 PF01979 Amidohydrolase family SD85_RS03540 PF11258 Protein of unknown function (DUF3048) N-terminal domain SD85_RS03540 PF17479 Protein of unknown function (DUF3048) C-terminal domain SD85_RS03545 PF01371 Trp repressor protein SD85_RS03550 PF01645 Conserved region in glutamate synthase SD85_RS03555 PF01884 PcrB family SD85_RS03560 PF00580 UvrD/REP helicase N-terminal domain SD85_RS03560 PF13361 UvrD-like helicase C-terminal domain SD85_RS03565 PF03120 NAD-dependent DNA ligase OB-fold domain SD85_RS03565 PF01653 NAD-dependent DNA ligase adenylation domain SD85_RS03565 PF00533 BRCA1 C Terminus (BRCT) domain SD85_RS03565 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SD85_RS03565 PF12826 Helix-hairpin-helix motif SD85_RS03570 PF07537 CamS sex pheromone cAM373 precursor SD85_RS03580 PF01636 Phosphotransferase enzyme family SD85_RS03585 PF02308 MgtC family SD85_RS03590 PF00474 Sodium:solute symporter family SD85_RS03595 PF02686 Glu-tRNAGln amidotransferase C subunit SD85_RS03600 PF01425 Amidase SD85_RS03605 PF02934 GatB/GatE catalytic domain SD85_RS03605 PF02637 GatB domain SD85_RS03610 PF00440 Bacterial regulatory proteins, tetR family SD85_RS03615 PF00873 AcrB/AcrD/AcrF family SD85_RS03620 PF00781 Diacylglycerol kinase catalytic domain SD85_RS03625 PF01938 TRAM domain SD85_RS03625 PF05958 tRNA (Uracil-5-)-methyltransferase SD85_RS03630 PF02384 N-6 DNA Methylase SD85_RS03635 PF01420 Type I restriction modification DNA specificity domain SD85_RS03640 PF18766 SWI2/SNF2 ATPase SD85_RS03640 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SD85_RS03640 PF11867 Domain of unknown function (DUF3387) SD85_RS03650 PF04634 Protein of unknown function, DUF600 SD85_RS03655 PF04634 Protein of unknown function, DUF600 SD85_RS03660 PF04740 LXG domain of WXG superfamily SD85_RS03670 PF13176 Tetratricopeptide repeat SD85_RS03670 PF18801 response regulator aspartate phosphatase H, N terminal SD85_RS03680 PF01709 Transcriptional regulator SD85_RS03690 PF00440 Bacterial regulatory proteins, tetR family SD85_RS03695 PF12680 SnoaL-like domain SD85_RS03700 PF01370 NAD dependent epimerase/dehydratase family SD85_RS03705 PF04909 Amidohydrolase SD85_RS03710 PF00440 Bacterial regulatory proteins, tetR family SD85_RS03715 PF11007 Spore coat associated protein JA (CotJA) SD85_RS03720 PF12652 CotJB protein SD85_RS03725 PF05067 Manganese containing catalase SD85_RS03730 PF00583 Acetyltransferase (GNAT) family SD85_RS03735 PF14150 YesK-like protein SD85_RS03740 PF04854 Protein of unknown function, DUF624 SD85_RS03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS03745 PF06580 Histidine kinase SD85_RS03745 PF00672 HAMP domain SD85_RS03745 PF02743 Cache domain SD85_RS03750 PF00072 Response regulator receiver domain SD85_RS03750 PF12833 Helix-turn-helix domain SD85_RS03755 PF13416 Bacterial extracellular solute-binding protein SD85_RS03760 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS03765 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS03770 PF07470 Glycosyl Hydrolase Family 88 SD85_RS03775 PF12833 Helix-turn-helix domain SD85_RS03780 PF13472 GDSL-like Lipase/Acylhydrolase family SD85_RS03785 PF09224 Domain of unknown function (DUF1961) SD85_RS03790 PF04854 Protein of unknown function, DUF624 SD85_RS03795 PF18370 Rhamnogalacturonan I lyases beta-sheet domain SD85_RS03800 PF18370 Rhamnogalacturonan I lyases beta-sheet domain SD85_RS03800 PF01839 FG-GAP repeat SD85_RS03805 PF00657 GDSL-like Lipase/Acylhydrolase SD85_RS03810 PF02449 Beta-galactosidase SD85_RS03810 PF08532 Beta-galactosidase trimerisation domain SD85_RS03810 PF08533 Beta-galactosidase C-terminal domain SD85_RS03820 PF01547 Bacterial extracellular solute-binding protein SD85_RS03825 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS03830 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS03835 PF11975 Family 4 glycosyl hydrolase C-terminal domain SD85_RS03835 PF02056 Family 4 glycosyl hydrolase SD85_RS03840 PF04239 Protein of unknown function (DUF421) SD85_RS03845 PF03992 Antibiotic biosynthesis monooxygenase SD85_RS03850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_RS03860 PF01740 STAS domain SD85_RS03860 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain SD85_RS03865 PF10055 Uncharacterized small protein (DUF2292) SD85_RS03870 PF01027 Inhibitor of apoptosis-promoting Bax1 SD85_RS03875 PF01047 MarR family SD85_RS03880 PF01494 FAD binding domain SD85_RS03885 PF13037 Domain of unknown function (DUF3898) SD85_RS03885 PF13039 Protein of unknown function (DUF3900) SD85_RS03890 PF00667 FAD binding domain SD85_RS03890 PF00258 Flavodoxin SD85_RS03890 PF00067 Cytochrome P450 SD85_RS03890 PF00175 Oxidoreductase NAD-binding domain SD85_RS03895 PF00884 Sulfatase SD85_RS03900 PF00483 Nucleotidyl transferase SD85_RS03905 PF16363 GDP-mannose 4,6 dehydratase SD85_RS03910 PF03407 Nucleotide-diphospho-sugar transferase SD85_RS03915 PF00535 Glycosyl transferase family 2 SD85_RS03920 PF03407 Nucleotide-diphospho-sugar transferase SD85_RS03925 PF07690 Major Facilitator Superfamily SD85_RS03930 PF13419 Haloacid dehalogenase-like hydrolase SD85_RS03935 PF13520 Amino acid permease SD85_RS03940 PF00171 Aldehyde dehydrogenase family SD85_RS03945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SD85_RS03950 PF12848 ABC transporter SD85_RS03950 PF00005 ABC transporter SD85_RS03950 PF16326 ABC transporter C-terminal domain SD85_RS03955 PF10787 Uncharacterised protein from bacillus cereus group SD85_RS03960 PF13411 MerR HTH family regulatory protein SD85_RS03965 PF07690 Major Facilitator Superfamily SD85_RS03980 PF00005 ABC transporter SD85_RS03980 PF12848 ABC transporter SD85_RS03985 PF00270 DEAD/DEAH box helicase SD85_RS03985 PF00271 Helicase conserved C-terminal domain SD85_RS03990 PF00583 Acetyltransferase (GNAT) family SD85_RS03995 PF16884 N-terminal domain of oxidoreductase SD85_RS03995 PF00107 Zinc-binding dehydrogenase SD85_RS04000 PF00005 ABC transporter SD85_RS04005 PF01032 FecCD transport family SD85_RS04010 PF01032 FecCD transport family SD85_RS04015 PF01497 Periplasmic binding protein SD85_RS04020 PF11486 Protein of unknown function (DUF3212) SD85_RS04025 PF11181 Heat induced stress protein YflT SD85_RS04030 PF00544 Pectate lyase SD85_RS04035 PF00939 Sodium:sulfate symporter transmembrane region SD85_RS04040 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SD85_RS04040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS04045 PF12431 Transcriptional regulator SD85_RS04045 PF00072 Response regulator receiver domain SD85_RS04045 PF08279 HTH domain SD85_RS04050 PF03401 Tripartite tricarboxylate transporter family receptor SD85_RS04055 PF03600 Citrate transporter SD85_RS04060 PF00753 Metallo-beta-lactamase superfamily SD85_RS04065 PF02898 Nitric oxide synthase, oxygenase domain SD85_RS04070 PF00708 Acylphosphatase SD85_RS04075 PF03475 3-alpha domain SD85_RS04075 PF03473 MOSC domain SD85_RS04080 PF11121 Protein of unknown function (DUF2639) SD85_RS04090 PF11588 Protein of unknown function (DUF3243) SD85_RS04095 PF00557 Metallopeptidase family M24 SD85_RS04100 PF02378 Phosphotransferase system, EIIC SD85_RS04100 PF00367 phosphotransferase system, EIIB SD85_RS04105 PF00884 Sulfatase SD85_RS04110 PF09350 Domain of unknown function (DUF1992) SD85_RS04115 PF01235 Sodium:alanine symporter family SD85_RS04120 PF03845 Spore germination protein SD85_RS04130 PF05504 Spore germination B3/ GerAC like, C-terminal SD85_RS04135 PF03323 Bacillus/Clostridium GerA spore germination protein SD85_RS04140 PF00367 phosphotransferase system, EIIB SD85_RS04140 PF02378 Phosphotransferase system, EIIC SD85_RS04145 PF00128 Alpha amylase, catalytic domain SD85_RS04145 PF16657 Maltogenic Amylase, C-terminal domain SD85_RS04150 PF00392 Bacterial regulatory proteins, gntR family SD85_RS04150 PF07702 UTRA domain SD85_RS04155 PF00881 Nitroreductase family SD85_RS04160 PF02872 5'-nucleotidase, C-terminal domain SD85_RS04160 PF00149 Calcineurin-like phosphoesterase SD85_RS04165 PF01965 DJ-1/PfpI family SD85_RS04170 PF07690 Major Facilitator Superfamily SD85_RS04175 PF06569 Protein of unknown function (DUF1128) SD85_RS04180 PF01451 Low molecular weight phosphotyrosine protein phosphatase SD85_RS04190 PF03631 Virulence factor BrkB SD85_RS04200 PF07690 Major Facilitator Superfamily SD85_RS04210 PF01699 Sodium/calcium exchanger protein SD85_RS04215 PF14167 YfkD-like protein SD85_RS04220 PF00924 Mechanosensitive ion channel SD85_RS04225 PF04055 Radical SAM superfamily SD85_RS04225 PF08756 YfkB-like domain SD85_RS04235 PF01522 Polysaccharide deacetylase SD85_RS04240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SD85_RS04240 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SD85_RS04245 PF01544 CorA-like Mg2+ transporter protein SD85_RS04250 PF00730 HhH-GPD superfamily base excision DNA repair protein SD85_RS04260 PF01938 TRAM domain SD85_RS04260 PF05958 tRNA (Uracil-5-)-methyltransferase SD85_RS04265 PF01207 Dihydrouridine synthase (Dus) SD85_RS04270 PF13302 Acetyltransferase (GNAT) domain SD85_RS04285 PF00676 Dehydrogenase E1 component SD85_RS04290 PF02780 Transketolase, C-terminal domain SD85_RS04290 PF02779 Transketolase, pyrimidine binding domain SD85_RS04295 PF02817 e3 binding domain SD85_RS04295 PF00364 Biotin-requiring enzyme SD85_RS04295 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SD85_RS04300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SD85_RS04300 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_RS04305 PF01590 GAF domain SD85_RS04305 PF02954 Bacterial regulatory protein, Fis family SD85_RS04305 PF00158 Sigma-54 interaction domain SD85_RS04310 PF08141 Small acid-soluble spore protein H family SD85_RS04315 PF02694 Uncharacterised BCR, YnfA/UPF0060 family SD85_RS04320 PF17353 Family of unknown function (DUF5381) SD85_RS04335 PF06013 Proteins of 100 residues with WXG SD85_RS04340 PF02056 Family 4 glycosyl hydrolase SD85_RS04340 PF11975 Family 4 glycosyl hydrolase C-terminal domain SD85_RS04345 PF01380 SIS domain SD85_RS04345 PF01418 Helix-turn-helix domain, rpiR family SD85_RS04350 PF02378 Phosphotransferase system, EIIC SD85_RS04350 PF00367 phosphotransferase system, EIIB SD85_RS04355 PF00005 ABC transporter SD85_RS04355 PF00664 ABC transporter transmembrane region SD85_RS04360 PF00664 ABC transporter transmembrane region SD85_RS04360 PF00005 ABC transporter SD85_RS04365 PF07681 DoxX SD85_RS04370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_RS04375 PF07730 Histidine kinase SD85_RS04380 PF00196 Bacterial regulatory proteins, luxR family SD85_RS04380 PF00072 Response regulator receiver domain SD85_RS04385 PF00005 ABC transporter SD85_RS04405 PF03551 Transcriptional regulator PadR-like family SD85_RS04405 PF10400 Virulence activator alpha C-term SD85_RS04410 PF01674 Lipase (class 2) SD85_RS04415 PF01757 Acyltransferase family SD85_RS04420 PF12867 DinB superfamily SD85_RS04425 PF07690 Major Facilitator Superfamily SD85_RS04430 PF01047 MarR family SD85_RS04435 PF03706 Lysylphosphatidylglycerol synthase TM region SD85_RS04435 PF09924 Uncharacterised conserved protein (DUF2156) SD85_RS04440 PF01497 Periplasmic binding protein SD85_RS04445 PF01032 FecCD transport family SD85_RS04450 PF01032 FecCD transport family SD85_RS04460 PF00881 Nitroreductase family SD85_RS04465 PF14151 YfhD-like protein SD85_RS04470 PF14152 YfhE-like protein SD85_RS04475 PF01370 NAD dependent epimerase/dehydratase family SD85_RS04475 PF08338 Domain of unknown function (DUF1731) SD85_RS04480 PF02631 RecX family SD85_RS04485 PF08838 Protein of unknown function (DUF1811) SD85_RS04495 PF07690 Major Facilitator Superfamily SD85_RS04500 PF08176 Small acid-soluble spore protein K family SD85_RS04505 PF14043 WVELL protein SD85_RS04510 PF08239 Bacterial SH3 domain SD85_RS04515 PF13630 SdpI/YhfL protein family SD85_RS04520 PF00561 alpha/beta hydrolase fold SD85_RS04525 PF00535 Glycosyl transferase family 2 SD85_RS04530 PF09586 Bacterial membrane protein YfhO SD85_RS04535 PF04307 LexA-binding, inner membrane-associated putative hydrolase SD85_RS04540 PF00730 HhH-GPD superfamily base excision DNA repair protein SD85_RS04540 PF14815 NUDIX domain SD85_RS04555 PF04259 Small, acid-soluble spore protein, gamma-type SD85_RS04560 PF14182 YgaB-like protein SD85_RS04565 PF04167 Protein of unknown function (DUF402) SD85_RS04570 PF00005 ABC transporter SD85_RS04570 PF00664 ABC transporter transmembrane region SD85_RS04575 PF06081 Aromatic acid exporter family member 1 SD85_RS04580 PF00202 Aminotransferase class-III SD85_RS04585 PF00578 AhpC/TSA family SD85_RS04590 PF01475 Ferric uptake regulator family SD85_RS04595 PF11023 Zinc-ribbon containing domain SD85_RS04600 PF14540 Nucleotidyltransferase-like SD85_RS04600 PF18576 Helix-turn-helix domain SD85_RS04710 PF07070 SpoOM protein SD85_RS04720 PF07875 Coat F domain SD85_RS04725 PF03575 Peptidase family S51 SD85_RS04730 PF13667 ThiC-associated domain SD85_RS04730 PF01964 Radical SAM ThiC family SD85_RS04735 PF13040 Fur-regulated basic protein B SD85_RS04740 PF06628 Catalase-related immune-responsive SD85_RS04740 PF00199 Catalase SD85_RS04745 PF00005 ABC transporter SD85_RS04750 PF09084 NMT1/THI5 like SD85_RS04755 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS04760 PF00296 Luciferase-like monooxygenase SD85_RS04770 PF00253 Ribosomal protein S14p/S29e SD85_RS04780 PF01381 Helix-turn-helix SD85_RS04795 PF08331 Domain of unknown function (DUF1730) SD85_RS04800 PF12671 Putative amidase domain SD85_RS04805 PF00588 SpoU rRNA Methylase family SD85_RS04810 PF13171 Protein of unknown function (DUF4004) SD85_RS04815 PF04519 Polymer-forming cytoskeletal SD85_RS04825 PF06798 PrkA serine protein kinase C-terminal domain SD85_RS04825 PF08298 PrkA AAA domain SD85_RS04830 PF04285 Protein of unknown function (DUF444) SD85_RS04835 PF01047 MarR family SD85_RS04845 PF07690 Major Facilitator Superfamily SD85_RS04850 PF03358 NADPH-dependent FMN reductase SD85_RS04865 PF00392 Bacterial regulatory proteins, gntR family SD85_RS04870 PF00005 ABC transporter SD85_RS04875 PF00005 ABC transporter SD85_RS04885 PF00313 'Cold-shock' DNA-binding domain SD85_RS04890 PF03180 NLPA lipoprotein SD85_RS04895 PF07694 5TMR of 5TMR-LYT SD85_RS04895 PF00990 Diguanylate cyclase, GGDEF domain SD85_RS04900 PF00375 Sodium:dicarboxylate symporter family SD85_RS04910 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) SD85_RS04920 PF07875 Coat F domain SD85_RS04925 PF00565 Staphylococcal nuclease homologue SD85_RS04925 PF00149 Calcineurin-like phosphoesterase SD85_RS04925 PF02872 5'-nucleotidase, C-terminal domain SD85_RS04925 PF00746 LPXTG cell wall anchor motif SD85_RS04930 PF04203 Sortase domain SD85_RS04935 PF00849 RNA pseudouridylate synthase SD85_RS04935 PF01479 S4 domain SD85_RS04940 PF17326 Family of unknown function (DUF5365) SD85_RS04945 PF00571 CBS domain SD85_RS04950 PF13419 Haloacid dehalogenase-like hydrolase SD85_RS04955 PF00795 Carbon-nitrogen hydrolase SD85_RS04955 PF00583 Acetyltransferase (GNAT) family SD85_RS04965 PF00202 Aminotransferase class-III SD85_RS04970 PF04309 Glycerol-3-phosphate responsive antiterminator SD85_RS04975 PF00230 Major intrinsic protein SD85_RS04980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SD85_RS04980 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SD85_RS04985 PF01266 FAD dependent oxidoreductase SD85_RS04985 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SD85_RS04990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SD85_RS04990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SD85_RS04990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SD85_RS04990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SD85_RS04995 PF07730 Histidine kinase SD85_RS04995 PF13185 GAF domain SD85_RS05000 PF00196 Bacterial regulatory proteins, luxR family SD85_RS05000 PF00072 Response regulator receiver domain SD85_RS05005 PF03358 NADPH-dependent FMN reductase SD85_RS05010 PF14148 YhdB-like protein SD85_RS05015 PF13028 Protein of unknown function (DUF3889) SD85_RS05020 PF00877 NlpC/P60 family SD85_RS05020 PF01476 LysM domain SD85_RS05025 PF02082 Transcriptional regulator SD85_RS05030 PF05552 Conserved TM helix SD85_RS05035 PF04293 SpoVR like protein SD85_RS05040 PF00245 Alkaline phosphatase SD85_RS05045 PF01476 LysM domain SD85_RS05045 PF00877 NlpC/P60 family SD85_RS05050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_RS05050 PF03466 LysR substrate binding domain SD85_RS05055 PF00285 Citrate synthase, C-terminal domain SD85_RS05065 PF13520 Amino acid permease SD85_RS05070 PF00209 Sodium:neurotransmitter symporter family SD85_RS05075 PF00155 Aminotransferase class I and II SD85_RS05075 PF00392 Bacterial regulatory proteins, gntR family SD85_RS05080 PF00583 Acetyltransferase (GNAT) family SD85_RS05085 PF17453 Sigma-M inhibitor SD85_RS05090 PF13791 Sigma factor regulator C-terminal SD85_RS05090 PF13800 Sigma factor regulator N-terminal SD85_RS05095 PF08281 Sigma-70, region 4 SD85_RS05095 PF04542 Sigma-70 region 2 SD85_RS05100 PF00248 Aldo/keto reductase family SD85_RS05105 PF01553 Acyltransferase SD85_RS05110 PF01266 FAD dependent oxidoreductase SD85_RS05120 PF01595 Cyclin M transmembrane N-terminal domain SD85_RS05120 PF00571 CBS domain SD85_RS05120 PF03471 Transporter associated domain SD85_RS05125 PF13411 MerR HTH family regulatory protein SD85_RS05130 PF00155 Aminotransferase class I and II SD85_RS05135 PF00571 CBS domain SD85_RS05135 PF01595 Cyclin M transmembrane N-terminal domain SD85_RS05135 PF03471 Transporter associated domain SD85_RS05140 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SD85_RS05145 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SD85_RS05150 PF03009 Glycerophosphoryl diester phosphodiesterase family SD85_RS05155 PF17444 Uncharacterized YhdX-like SD85_RS05160 PF00924 Mechanosensitive ion channel SD85_RS05165 PF02146 Sir2 family SD85_RS05170 PF01522 Polysaccharide deacetylase SD85_RS05175 PF01063 Amino-transferase class IV SD85_RS05180 PF03553 Na+/H+ antiporter family SD85_RS05185 PF00582 Universal stress protein family SD85_RS05195 PF00664 ABC transporter transmembrane region SD85_RS05195 PF00005 ABC transporter SD85_RS05200 PF00664 ABC transporter transmembrane region SD85_RS05200 PF00005 ABC transporter SD85_RS05205 PF13460 NAD(P)H-binding SD85_RS05210 PF00269 Small, acid-soluble spore proteins, alpha/beta type SD85_RS05215 PF17277 Family of unknown function (DUF5342) SD85_RS05225 PF14398 YheC/D like ATP-grasp SD85_RS05230 PF14398 YheC/D like ATP-grasp SD85_RS05235 PF04286 Protein of unknown function (DUF445) SD85_RS05240 PF06133 Control of competence regulator ComK, YlbF/YmcA SD85_RS05245 PF08713 DNA alkylation repair enzyme SD85_RS05255 PF04055 Radical SAM superfamily SD85_RS05260 PF00999 Sodium/hydrogen exchanger family SD85_RS05265 PF02080 TrkA-C domain SD85_RS05275 PF00378 Enoyl-CoA hydratase/isomerase SD85_RS05280 PF14120 YhzD-like protein SD85_RS05285 PF00005 ABC transporter SD85_RS05285 PF13732 Domain of unknown function (DUF4162) SD85_RS05295 PF00149 Calcineurin-like phosphoesterase SD85_RS05300 PF13514 AAA domain SD85_RS05305 PF01966 HD domain SD85_RS05310 PF14147 Sporulation protein YhaL SD85_RS05325 PF09680 Family of unknown function SD85_RS05330 PF11667 Putative zincin peptidase SD85_RS05335 PF08963 Protein of unknown function (DUF1878) SD85_RS05340 PF01047 MarR family SD85_RS05345 PF12732 YtxH-like protein SD85_RS05355 PF17099 Tryptophan transporter TrpP SD85_RS05360 PF00266 Aminotransferase class-V SD85_RS05365 PF01230 HIT domain SD85_RS05370 PF00005 ABC transporter SD85_RS05375 PF05975 Bacterial ABC transporter protein EcsB SD85_RS05380 PF12787 EcsC protein family SD85_RS05385 PF01546 Peptidase family M20/M25/M40 SD85_RS05385 PF07687 Peptidase dimerisation domain SD85_RS05400 PF03992 Antibiotic biosynthesis monooxygenase SD85_RS05405 PF00905 Penicillin binding protein transpeptidase domain SD85_RS05405 PF00912 Transglycosylase SD85_RS05410 PF01208 Uroporphyrinogen decarboxylase (URO-D) SD85_RS05415 PF00762 Ferrochelatase SD85_RS05420 PF01593 Flavin containing amine oxidoreductase SD85_RS05425 PF00440 Bacterial regulatory proteins, tetR family SD85_RS05425 PF17932 Tetracyclin repressor-like, C-terminal domain SD85_RS05435 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SD85_RS05435 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SD85_RS05440 PF10086 YhfC intramembrane metalloprotease SD85_RS05450 PF05343 M42 glutamyl aminopeptidase SD85_RS05455 PF04266 ASCH domain SD85_RS05460 PF00375 Sodium:dicarboxylate symporter family SD85_RS05465 PF14149 YhfH-like protein SD85_RS05470 PF12706 Beta-lactamase superfamily domain SD85_RS05475 PF10437 Bacterial lipoate protein ligase C-terminus SD85_RS05475 PF03099 Biotin/lipoate A/B protein ligase family SD85_RS05480 PF13460 NAD(P)H-binding SD85_RS05485 PF13193 AMP-binding enzyme C-terminal domain SD85_RS05485 PF00501 AMP-binding enzyme SD85_RS05495 PF16491 CAAX prenyl protease N-terminal, five membrane helices SD85_RS05495 PF01435 Peptidase family M48 SD85_RS05500 PF05922 Peptidase inhibitor I9 SD85_RS05500 PF00082 Subtilase family SD85_RS05505 PF00583 Acetyltransferase (GNAT) family SD85_RS05510 PF08240 Alcohol dehydrogenase GroES-like domain SD85_RS05510 PF00107 Zinc-binding dehydrogenase SD85_RS05515 PF01497 Periplasmic binding protein SD85_RS05520 PF00300 Histidine phosphatase superfamily (branch 1) SD85_RS05525 PF02803 Thiolase, C-terminal domain SD85_RS05525 PF00108 Thiolase, N-terminal domain SD85_RS05530 PF13193 AMP-binding enzyme C-terminal domain SD85_RS05530 PF00501 AMP-binding enzyme SD85_RS05535 PF02632 BioY family SD85_RS05540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SD85_RS05545 PF01266 FAD dependent oxidoreductase SD85_RS05545 PF00355 Rieske [2Fe-2S] domain SD85_RS05555 PF08858 IDEAL domain SD85_RS05560 PF06338 ComK protein SD85_RS05570 PF05901 Excalibur calcium-binding domain SD85_RS05575 PF00474 Sodium:solute symporter family SD85_RS05580 PF11755 Protein of unknown function (DUF3311) SD85_RS05590 PF09335 SNARE associated Golgi protein SD85_RS05595 PF10502 Signal peptidase, peptidase S26 SD85_RS05600 PF01494 FAD binding domain SD85_RS05605 PF01047 MarR family SD85_RS05615 PF07690 Major Facilitator Superfamily SD85_RS05620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SD85_RS05620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SD85_RS05625 PF05116 Sucrose-6F-phosphate phosphohydrolase SD85_RS05630 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SD85_RS05635 PF00356 Bacterial regulatory proteins, lacI family SD85_RS05640 PF05145 Transition state regulatory protein AbrB SD85_RS05645 PF07690 Major Facilitator Superfamily SD85_RS05650 PF12793 Sugar transport-related sRNA regulator N-term SD85_RS05650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SD85_RS05655 PF03860 Domain of Unknown Function (DUF326) SD85_RS05660 PF02915 Rubrerythrin SD85_RS05665 PF12705 PD-(D/E)XK nuclease superfamily SD85_RS05665 PF13361 UvrD-like helicase C-terminal domain SD85_RS05670 PF13361 UvrD-like helicase C-terminal domain SD85_RS05670 PF12705 PD-(D/E)XK nuclease superfamily SD85_RS05670 PF00580 UvrD/REP helicase N-terminal domain SD85_RS05675 PF00149 Calcineurin-like phosphoesterase SD85_RS05675 PF12320 Type 5 capsule protein repressor C-terminal domain SD85_RS05680 PF13476 AAA domain SD85_RS05690 PF10676 Spore germination protein gerPA/gerPF SD85_RS05695 PF10970 Spore germination protein GerPE SD85_RS05705 PF10737 Spore germination protein GerPC SD85_RS05710 PF10803 Spore germination GerPB SD85_RS05715 PF10676 Spore germination protein gerPA/gerPF SD85_RS05720 PF09388 Spo0E like sporulation regulatory protein SD85_RS05725 PF08757 CotH kinase protein SD85_RS05730 PF01557 Fumarylacetoacetate (FAA) hydrolase family SD85_RS05735 PF07457 Protein of unknown function (DUF1516) SD85_RS05740 PF17936 Bacterial Ig domain SD85_RS05740 PF00082 Subtilase family SD85_RS05745 PF10949 Protein of unknown function (DUF2777) SD85_RS05750 PF00733 Asparagine synthase SD85_RS05750 PF13537 Glutamine amidotransferase domain SD85_RS05755 PF05163 DinB family SD85_RS05765 PF01554 MatE SD85_RS05770 PF02311 AraC-like ligand binding domain SD85_RS05770 PF12833 Helix-turn-helix domain SD85_RS05775 PF00356 Bacterial regulatory proteins, lacI family SD85_RS05780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SD85_RS05780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SD85_RS05785 PF05163 DinB family SD85_RS05790 PF01810 LysE type translocator SD85_RS05795 PF00392 Bacterial regulatory proteins, gntR family SD85_RS05795 PF00155 Aminotransferase class I and II SD85_RS05800 PF13599 Pentapeptide repeats (9 copies) SD85_RS05805 PF00561 alpha/beta hydrolase fold SD85_RS05805 PF08386 TAP-like protein SD85_RS05815 PF01747 ATP-sulfurylase SD85_RS05815 PF14306 PUA-like domain SD85_RS05820 PF01507 Phosphoadenosine phosphosulfate reductase family SD85_RS05825 PF04029 2-phosphosulpholactate phosphatase SD85_RS05830 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) SD85_RS05835 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SD85_RS05840 PF13378 Enolase C-terminal domain-like SD85_RS05840 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SD85_RS05845 PF07690 Major Facilitator Superfamily SD85_RS05850 PF13673 Acetyltransferase (GNAT) domain SD85_RS05850 PF18014 Acetyltransferase (GNAT) domain SD85_RS05855 PF13673 Acetyltransferase (GNAT) domain SD85_RS05860 PF02574 Homocysteine S-methyltransferase SD85_RS05860 PF02219 Methylenetetrahydrofolate reductase SD85_RS05865 PF04461 Protein of unknown function (DUF520) SD85_RS05870 PF13509 S1 domain SD85_RS05870 PF17783 CvfB-like winged helix domain SD85_RS05875 PF12650 Domain of unknown function (DUF3784) SD85_RS05880 PF02645 Uncharacterised protein, DegV family COG1307 SD85_RS05885 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SD85_RS05885 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SD85_RS05890 PF12690 Intracellular proteinase inhibitor SD85_RS05895 PF12758 Protein of unknown function (DUF3813) SD85_RS05910 PF00326 Prolyl oligopeptidase family SD85_RS05915 PF01883 Iron-sulfur cluster assembly protein SD85_RS05925 PF01565 FAD binding domain SD85_RS05930 PF07690 Major Facilitator Superfamily SD85_RS05935 PF01118 Semialdehyde dehydrogenase, NAD binding domain SD85_RS05935 PF02774 Semialdehyde dehydrogenase, dimerisation domain SD85_RS05940 PF01960 ArgJ family SD85_RS05945 PF00696 Amino acid kinase family SD85_RS05950 PF00202 Aminotransferase class-III SD85_RS05955 PF00117 Glutamine amidotransferase class-I SD85_RS05955 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SD85_RS05960 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SD85_RS05960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SD85_RS05965 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SD85_RS05965 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SD85_RS05970 PF14168 YjzC-like protein SD85_RS05975 PF11151 Protein of unknown function (DUF2929) SD85_RS05990 PF02608 ABC transporter substrate-binding protein PnrA-like SD85_RS05995 PF10815 ComZ SD85_RS06005 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SD85_RS06005 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SD85_RS06010 PF02801 Beta-ketoacyl synthase, C-terminal domain SD85_RS06010 PF00109 Beta-ketoacyl synthase, N-terminal domain SD85_RS06015 PF10026 Predicted Zn-dependent protease (DUF2268) SD85_RS06020 PF00005 ABC transporter SD85_RS06020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SD85_RS06025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SD85_RS06025 PF00005 ABC transporter SD85_RS06030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SD85_RS06035 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS06040 PF12911 N-terminal TM domain of oligopeptide transport permease C SD85_RS06040 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS06045 PF12227 Protein of unknown function (DUF3603) SD85_RS06050 PF00579 tRNA synthetases class I (W and Y) SD85_RS06055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SD85_RS06060 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS06065 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS06065 PF12911 N-terminal TM domain of oligopeptide transport permease C SD85_RS06070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SD85_RS06070 PF00005 ABC transporter SD85_RS06075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SD85_RS06075 PF00005 ABC transporter SD85_RS06080 PF07690 Major Facilitator Superfamily SD85_RS06085 PF13508 Acetyltransferase (GNAT) domain SD85_RS06090 PF03960 ArsC family SD85_RS06095 PF03741 Integral membrane protein TerC family SD85_RS06100 PF05389 Negative regulator of genetic competence (MecA) SD85_RS06105 PF06054 Competence protein CoiA-like family SD85_RS06110 PF08439 Oligopeptidase F SD85_RS06110 PF01432 Peptidase family M3 SD85_RS06130 PF01152 Bacterial-like globin SD85_RS06135 PF01464 Transglycosylase SLT domain SD85_RS06140 PF01928 CYTH domain SD85_RS06150 PF04607 Region found in RelA / SpoT proteins SD85_RS06155 PF01513 ATP-NAD kinase SD85_RS06160 PF00849 RNA pseudouridylate synthase SD85_RS06165 PF00149 Calcineurin-like phosphoesterase SD85_RS06170 PF02080 TrkA-C domain SD85_RS06170 PF02254 TrkA-N domain SD85_RS06170 PF00999 Sodium/hydrogen exchanger family SD85_RS06175 PF03070 TENA/THI-4/PQQC family SD85_RS06180 PF02581 Thiamine monophosphate synthase SD85_RS06185 PF01266 FAD dependent oxidoreductase SD85_RS06190 PF02597 ThiS family SD85_RS06195 PF05690 Thiazole biosynthesis protein ThiG SD85_RS06200 PF00899 ThiF family SD85_RS06205 PF08543 Phosphomethylpyrimidine kinase SD85_RS06215 PF14153 Spore coat protein CotO SD85_RS06220 PF10612 Spore coat protein Z SD85_RS06225 PF10612 Spore coat protein Z SD85_RS06230 PF07552 Spore Coat Protein X and V domain SD85_RS06240 PF07552 Spore Coat Protein X and V domain SD85_RS06245 PF07098 Protein of unknown function (DUF1360) SD85_RS06265 PF14069 Stage VI sporulation protein F SD85_RS06270 PF00580 UvrD/REP helicase N-terminal domain SD85_RS06270 PF13361 UvrD-like helicase C-terminal domain SD85_RS06280 PF13673 Acetyltransferase (GNAT) domain SD85_RS06290 PF00756 Putative esterase SD85_RS06295 PF01053 Cys/Met metabolism PLP-dependent enzyme SD85_RS06300 PF01053 Cys/Met metabolism PLP-dependent enzyme SD85_RS06310 PF05684 Protein of unknown function (DUF819) SD85_RS06320 PF01510 N-acetylmuramoyl-L-alanine amidase SD85_RS06320 PF01471 Putative peptidoglycan binding domain SD85_RS06335 PF13176 Tetratricopeptide repeat SD85_RS06335 PF18801 response regulator aspartate phosphatase H, N terminal SD85_RS06355 PF08863 YolD-like protein SD85_RS06365 PF02378 Phosphotransferase system, EIIC SD85_RS06365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SD85_RS06365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SD85_RS06370 PF01238 Phosphomannose isomerase type I SD85_RS06390 PF04073 Aminoacyl-tRNA editing domain SD85_RS06395 PF13783 Domain of unknown function (DUF4177) SD85_RS06410 PF01040 UbiA prenyltransferase family SD85_RS06420 PF11738 Protein of unknown function (DUF3298) SD85_RS06420 PF01522 Polysaccharide deacetylase SD85_RS06420 PF13739 Deacetylase PdaC SD85_RS06425 PF10901 Protein of unknown function (DUF2690) SD85_RS06430 PF14070 Putative motility protein SD85_RS06440 PF10026 Predicted Zn-dependent protease (DUF2268) SD85_RS06445 PF10990 Protein of unknown function (DUF2809) SD85_RS06450 PF14172 Domain of unknown function (DUF4309) SD85_RS06455 PF01568 Molydopterin dinucleotide binding domain SD85_RS06455 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SD85_RS06455 PF12838 4Fe-4S dicluster domain SD85_RS06455 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SD85_RS06455 PF00384 Molybdopterin oxidoreductase SD85_RS06460 PF07849 Protein of unknown function (DUF1641) SD85_RS06465 PF11611 Domain of unknown function (DUF4352) SD85_RS06470 PF00293 NUDIX domain SD85_RS06480 PF00067 Cytochrome P450 SD85_RS06485 PF04101 Glycosyltransferase family 28 C-terminal domain SD85_RS06495 PF02602 Uroporphyrinogen-III synthase HemD SD85_RS06500 PF03649 Uncharacterised protein family (UPF0014) SD85_RS06505 PF00005 ABC transporter SD85_RS06510 PF13536 Putative multidrug resistance efflux transporter SD85_RS06520 PF07849 Protein of unknown function (DUF1641) SD85_RS06525 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_RS06530 PF02614 Glucuronate isomerase SD85_RS06540 PF02615 Malate/L-lactate dehydrogenase SD85_RS06545 PF00107 Zinc-binding dehydrogenase SD85_RS06545 PF08240 Alcohol dehydrogenase GroES-like domain SD85_RS06550 PF03786 D-mannonate dehydratase (UxuA) SD85_RS06555 PF00106 short chain dehydrogenase SD85_RS06560 PF07690 Major Facilitator Superfamily SD85_RS06565 PF00356 Bacterial regulatory proteins, lacI family SD85_RS06570 PF08125 Mannitol dehydrogenase C-terminal domain SD85_RS06570 PF01232 Mannitol dehydrogenase Rossmann domain SD85_RS06575 PF08666 SAF domain SD85_RS06575 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus SD85_RS06580 PF01925 Sulfite exporter TauE/SafE SD85_RS06585 PF05163 DinB family SD85_RS06590 PF00004 ATPase family associated with various cellular activities (AAA) SD85_RS06595 PF18801 response regulator aspartate phosphatase H, N terminal SD85_RS06605 PF03795 YCII-related domain SD85_RS06610 PF01476 LysM domain SD85_RS06610 PF01510 N-acetylmuramoyl-L-alanine amidase SD85_RS06610 PF01471 Putative peptidoglycan binding domain SD85_RS06615 PF08000 Bacterial PH domain SD85_RS06620 PF05908 Poly-gamma-glutamate hydrolase SD85_RS06625 PF05067 Manganese containing catalase SD85_RS06630 PF06114 IrrE N-terminal-like domain SD85_RS06635 PF01381 Helix-turn-helix SD85_RS06650 PF01695 IstB-like ATP binding protein SD85_RS06670 PF17356 Phage-like element PBSX protein XtrA SD85_RS06675 PF08281 Sigma-70, region 4 SD85_RS06680 PF10668 Phage terminase small subunit SD85_RS06680 PF03592 Terminase small subunit SD85_RS06685 PF04466 Phage terminase large subunit SD85_RS06685 PF17288 Terminase RNAseH like domain SD85_RS06690 PF04860 Phage portal protein SD85_RS06695 PF14550 Putative phage serine protease XkdF SD85_RS06700 PF05065 Phage capsid family SD85_RS06705 PF11436 Protein of unknown function (DUF3199) SD85_RS06710 PF12206 Domain of unknown function (DUF3599) SD85_RS06715 PF04883 Bacteriophage HK97-gp10, putative tail-component SD85_RS06730 PF17482 Phage tail sheath C-terminal domain SD85_RS06730 PF17481 Phage tail sheath protein beta-sandwich domain SD85_RS06730 PF04984 Phage tail sheath protein subtilisin-like domain SD85_RS06735 PF09393 Phage tail tube protein SD85_RS06740 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC SD85_RS06750 PF01464 Transglycosylase SLT domain SD85_RS06750 PF01464 Transglycosylase SLT domain SD85_RS06750 PF01464 Transglycosylase SLT domain SD85_RS06755 PF01476 LysM domain SD85_RS06765 PF10844 Protein of unknown function (DUF2577) SD85_RS06770 PF10934 Protein of unknown function (DUF2634) SD85_RS06775 PF04865 Baseplate J-like protein SD85_RS06780 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) SD85_RS06795 PF09636 XkdW protein SD85_RS06800 PF09693 Phage uncharacterised protein (Phage_XkdX) SD85_RS06810 PF10779 Haemolysin XhlA SD85_RS06815 PF04688 SPP1 phage holin SD85_RS06820 PF01471 Putative peptidoglycan binding domain SD85_RS06820 PF01476 LysM domain SD85_RS06820 PF01510 N-acetylmuramoyl-L-alanine amidase SD85_RS06825 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system SD85_RS06830 PF14171 Toxin SpoIISA, type II toxin-antitoxin system SD85_RS06835 PF01384 Phosphate transporter family SD85_RS06840 PF01865 Protein of unknown function DUF47 SD85_RS06845 PF13520 Amino acid permease SD85_RS06850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_RS06855 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase SD85_RS06860 PF00535 Glycosyl transferase family 2 SD85_RS06870 PF13180 PDZ domain SD85_RS06875 PF14748 Pyrroline-5-carboxylate reductase dimerisation SD85_RS06875 PF03807 NADP oxidoreductase coenzyme F420-dependent SD85_RS06880 PF04951 D-aminopeptidase SD85_RS06885 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS06890 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS06890 PF12911 N-terminal TM domain of oligopeptide transport permease C SD85_RS06895 PF00005 ABC transporter SD85_RS06895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SD85_RS06900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SD85_RS06905 PF02016 LD-carboxypeptidase N-terminal domain SD85_RS06905 PF17676 LD-carboxypeptidase C-terminal domain SD85_RS06910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SD85_RS06910 PF13378 Enolase C-terminal domain-like SD85_RS06915 PF00877 NlpC/P60 family SD85_RS06920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SD85_RS06920 PF00005 ABC transporter SD85_RS06925 PF10282 Lactonase, 7-bladed beta-propeller SD85_RS06935 PF03061 Thioesterase superfamily SD85_RS06940 PF00042 Globin SD85_RS06940 PF00175 Oxidoreductase NAD-binding domain SD85_RS06940 PF00970 Oxidoreductase FAD-binding domain SD85_RS06950 PF04239 Protein of unknown function (DUF421) SD85_RS06955 PF12867 DinB superfamily SD85_RS06960 PF13302 Acetyltransferase (GNAT) domain SD85_RS06965 PF00893 Small Multidrug Resistance protein SD85_RS06970 PF00893 Small Multidrug Resistance protein SD85_RS06975 PF01842 ACT domain SD85_RS06975 PF00551 Formyl transferase SD85_RS06980 PF00696 Amino acid kinase family SD85_RS06980 PF01472 PUA domain SD85_RS06985 PF00171 Aldehyde dehydrogenase family SD85_RS06990 PF02566 OsmC-like protein SD85_RS06995 PF01047 MarR family SD85_RS07000 PF02566 OsmC-like protein SD85_RS07005 PF13181 Tetratricopeptide repeat SD85_RS07005 PF00535 Glycosyl transferase family 2 SD85_RS07010 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SD85_RS07015 PF00300 Histidine phosphatase superfamily (branch 1) SD85_RS07020 PF01717 Cobalamin-independent synthase, Catalytic domain SD85_RS07020 PF08267 Cobalamin-independent synthase, N-terminal domain SD85_RS07025 PF00082 Subtilase family SD85_RS07030 PF01740 STAS domain SD85_RS07035 PF02361 Cobalt transport protein SD85_RS07040 PF00005 ABC transporter SD85_RS07045 PF09819 ABC-type cobalt transport system, permease component SD85_RS07050 PF07615 YKOF-related Family SD85_RS07055 PF00486 Transcriptional regulatory protein, C terminal SD85_RS07055 PF00072 Response regulator receiver domain SD85_RS07060 PF00672 HAMP domain SD85_RS07060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS07060 PF00512 His Kinase A (phospho-acceptor) domain SD85_RS07065 PF03413 Peptidase propeptide and YPEB domain SD85_RS07070 PF03413 Peptidase propeptide and YPEB domain SD85_RS07075 PF11132 Transcriptional regulator protein (SplA) SD85_RS07085 PF00571 CBS domain SD85_RS07085 PF01769 Divalent cation transporter SD85_RS07085 PF03448 MgtE intracellular N domain SD85_RS07090 PF13411 MerR HTH family regulatory protein SD85_RS07105 PF01047 MarR family SD85_RS07110 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase SD85_RS07120 PF00149 Calcineurin-like phosphoesterase SD85_RS07130 PF00535 Glycosyl transferase family 2 SD85_RS07135 PF01068 ATP dependent DNA ligase domain SD85_RS07140 PF02735 Ku70/Ku80 beta-barrel domain SD85_RS07145 PF00990 Diguanylate cyclase, GGDEF domain SD85_RS07145 PF00563 EAL domain SD85_RS07145 PF03707 Bacterial signalling protein N terminal repeat SD85_RS07150 PF09335 SNARE associated Golgi protein SD85_RS07155 PF03741 Integral membrane protein TerC family SD85_RS07160 PF04542 Sigma-70 region 2 SD85_RS07170 PF00269 Small, acid-soluble spore proteins, alpha/beta type SD85_RS07175 PF08876 Domain of unknown function (DUF1836) SD85_RS07180 PF01435 Peptidase family M48 SD85_RS07185 PF02386 Cation transport protein SD85_RS07200 PF01757 Acyltransferase family SD85_RS07205 PF00989 PAS fold SD85_RS07205 PF13426 PAS domain SD85_RS07205 PF00512 His Kinase A (phospho-acceptor) domain SD85_RS07205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS07205 PF13188 PAS domain SD85_RS07210 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SD85_RS07210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SD85_RS07220 PF01008 Initiation factor 2 subunit family SD85_RS07225 PF01636 Phosphotransferase enzyme family SD85_RS07230 PF00795 Carbon-nitrogen hydrolase SD85_RS07235 PF00155 Aminotransferase class I and II SD85_RS07240 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain SD85_RS07240 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain SD85_RS07250 PF00596 Class II Aldolase and Adducin N-terminal domain SD85_RS07255 PF03079 ARD/ARD' family SD85_RS07260 PF06803 Protein of unknown function (DUF1232) SD85_RS07265 PF09388 Spo0E like sporulation regulatory protein SD85_RS07275 PF02743 Cache domain SD85_RS07275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS07275 PF00512 His Kinase A (phospho-acceptor) domain SD85_RS07280 PF01047 MarR family SD85_RS07285 PF13677 Membrane MotB of proton-channel complex MotA/MotB SD85_RS07285 PF00691 OmpA family SD85_RS07290 PF01618 MotA/TolQ/ExbB proton channel family SD85_RS07295 PF17871 AAA lid domain SD85_RS07295 PF00004 ATPase family associated with various cellular activities (AAA) SD85_RS07295 PF07724 AAA domain (Cdc48 subfamily) SD85_RS07295 PF10431 C-terminal, D2-small domain, of ClpB protein SD85_RS07305 PF06508 Queuosine biosynthesis protein QueC SD85_RS07310 PF01242 6-pyruvoyl tetrahydropterin synthase SD85_RS07315 PF04055 Radical SAM superfamily SD85_RS07320 PF14489 QueF-like protein SD85_RS07330 PF11514 Protein of unknown function (DUF3219) SD85_RS07335 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) SD85_RS07350 PF07486 Cell Wall Hydrolase SD85_RS07355 PF01943 Polysaccharide biosynthesis protein SD85_RS07360 PF00578 AhpC/TSA family SD85_RS07375 PF00557 Metallopeptidase family M24 SD85_RS07375 PF01321 Creatinase/Prolidase N-terminal domain SD85_RS07385 PF00356 Bacterial regulatory proteins, lacI family SD85_RS07385 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SD85_RS07390 PF03123 CAT RNA binding domain SD85_RS07390 PF00874 PRD domain SD85_RS07395 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SD85_RS07395 PF00367 phosphotransferase system, EIIB SD85_RS07395 PF02378 Phosphotransferase system, EIIC SD85_RS07400 PF00381 PTS HPr component phosphorylation site SD85_RS07405 PF02896 PEP-utilising enzyme, TIM barrel domain SD85_RS07405 PF00391 PEP-utilising enzyme, mobile domain SD85_RS07405 PF05524 PEP-utilising enzyme, N-terminal SD85_RS07410 PF11132 Transcriptional regulator protein (SplA) SD85_RS07420 PF00583 Acetyltransferase (GNAT) family SD85_RS07425 PF00672 HAMP domain SD85_RS07425 PF02743 Cache domain SD85_RS07425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SD85_RS07430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SD85_RS07430 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SD85_RS07435 PF00188 Cysteine-rich secretory protein family SD85_RS07440 PF00905 Penicillin binding protein transpeptidase domain SD85_RS07440 PF03717 Penicillin-binding Protein dimerisation domain SD85_RS07445 PF08447 PAS fold SD85_RS07445 PF00989 PAS fold SD85_RS07445 PF00512 His Kinase A (phospho-acceptor) domain SD85_RS07445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS07450 PF00155 Aminotransferase class I and II SD85_RS07460 PF00072 Response regulator receiver domain SD85_RS07460 PF01584 CheW-like domain SD85_RS07465 PF14177 YkyB-like protein SD85_RS07470 PF07690 Major Facilitator Superfamily SD85_RS07475 PF03734 L,D-transpeptidase catalytic domain SD85_RS07475 PF01476 LysM domain SD85_RS07480 PF00149 Calcineurin-like phosphoesterase SD85_RS07480 PF10518 TAT (twin-arginine translocation) pathway signal sequence SD85_RS07490 PF00563 EAL domain SD85_RS07490 PF10388 EAL-domain associated signalling protein domain SD85_RS07500 PF08796 Protein of unknown function (DUF1797) SD85_RS07505 PF04308 Ribonuclease H-like SD85_RS07510 PF14156 Antirepressor AbbA SD85_RS07520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_RS07520 PF03466 LysR substrate binding domain SD85_RS07525 PF00258 Flavodoxin SD85_RS07535 PF00258 Flavodoxin SD85_RS07540 PF14602 Hexapeptide repeat of succinyl-transferase SD85_RS07540 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SD85_RS07540 PF00132 Bacterial transferase hexapeptide (six repeats) SD85_RS07545 PF01546 Peptidase family M20/M25/M40 SD85_RS07545 PF07687 Peptidase dimerisation domain SD85_RS07550 PF03698 Uncharacterised protein family (UPF0180) SD85_RS07555 PF00924 Mechanosensitive ion channel SD85_RS07560 PF00578 AhpC/TSA family SD85_RS07560 PF10417 C-terminal domain of 1-Cys peroxiredoxin SD85_RS07565 PF00578 AhpC/TSA family SD85_RS07580 PF12804 MobA-like NTP transferase domain SD85_RS07585 PF00899 ThiF family SD85_RS07590 PF03454 MoeA C-terminal region (domain IV) SD85_RS07590 PF00994 Probable molybdopterin binding domain SD85_RS07590 PF03453 MoeA N-terminal region (domain I and II) SD85_RS07595 PF03205 Molybdopterin guanine dinucleotide synthesis protein B SD85_RS07600 PF02391 MoaE protein SD85_RS07605 PF02597 ThiS family SD85_RS07610 PF00664 ABC transporter transmembrane region SD85_RS07610 PF00005 ABC transporter SD85_RS07615 PF00005 ABC transporter SD85_RS07615 PF00664 ABC transporter transmembrane region SD85_RS07620 PF04893 Yip1 domain SD85_RS07625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SD85_RS07630 PF00005 ABC transporter SD85_RS07635 PF02687 FtsX-like permease family SD85_RS07635 PF12704 MacB-like periplasmic core domain SD85_RS07640 PF08220 DeoR-like helix-turn-helix domain SD85_RS07640 PF00455 DeoR C terminal sensor domain SD85_RS07645 PF00294 pfkB family carbohydrate kinase SD85_RS07650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SD85_RS07650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SD85_RS07655 PF13333 Integrase core domain SD85_RS07655 PF13276 HTH-like domain SD85_RS07655 PF00665 Integrase core domain SD85_RS07665 PF10502 Signal peptidase, peptidase S26 SD85_RS07675 PF00005 ABC transporter SD85_RS07675 PF12848 ABC transporter SD85_RS07680 PF02558 Ketopantoate reductase PanE/ApbA SD85_RS07680 PF08546 Ketopantoate reductase PanE/ApbA C terminal SD85_RS07685 PF02073 Thermophilic metalloprotease (M29) SD85_RS07690 PF17447 Uncharacterized YkpC-like SD85_RS07700 PF18277 AbrB C-terminal domain SD85_RS07700 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin SD85_RS07705 PF00989 PAS fold SD85_RS07705 PF00512 His Kinase A (phospho-acceptor) domain SD85_RS07705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS07710 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like SD85_RS07715 PF02080 TrkA-C domain SD85_RS07715 PF02254 TrkA-N domain SD85_RS07720 PF13382 Adenine deaminase C-terminal domain SD85_RS07720 PF01979 Amidohydrolase family SD85_RS07725 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SD85_RS07725 PF00753 Metallo-beta-lactamase superfamily SD85_RS07725 PF17770 Ribonuclease J C-terminal domain SD85_RS07730 PF07288 Protein of unknown function (DUF1447) SD85_RS07740 PF01327 Polypeptide deformylase SD85_RS07750 PF10368 Putative cell-wall binding lipoprotein SD85_RS07755 PF00676 Dehydrogenase E1 component SD85_RS07760 PF02780 Transketolase, C-terminal domain SD85_RS07760 PF02779 Transketolase, pyrimidine binding domain SD85_RS07765 PF00364 Biotin-requiring enzyme SD85_RS07765 PF02817 e3 binding domain SD85_RS07765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SD85_RS07770 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_RS07770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SD85_RS07785 PF13276 HTH-like domain SD85_RS07785 PF13333 Integrase core domain SD85_RS07785 PF00665 Integrase core domain SD85_RS07790 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SD85_RS07790 PF01276 Orn/Lys/Arg decarboxylase, major domain SD85_RS07795 PF05256 Uncharacterised protein family (UPF0223) SD85_RS07800 PF06335 Protein of unknown function (DUF1054) SD85_RS07810 PF00459 Inositol monophosphatase family SD85_RS07815 PF00583 Acetyltransferase (GNAT) family SD85_RS07820 PF04072 Leucine carboxyl methyltransferase SD85_RS07825 PF02868 Thermolysin metallopeptidase, alpha-helical domain SD85_RS07825 PF01447 Thermolysin metallopeptidase, catalytic domain SD85_RS07825 PF03413 Peptidase propeptide and YPEB domain SD85_RS07825 PF07504 Fungalysin/Thermolysin Propeptide Motif SD85_RS07840 PF08281 Sigma-70, region 4 SD85_RS07840 PF04542 Sigma-70 region 2 SD85_RS07845 PF13490 Putative zinc-finger SD85_RS07855 PF17259 Family of unknown function (DUF5325) SD85_RS07860 PF00679 Elongation factor G C-terminus SD85_RS07860 PF14492 Elongation Factor G, domain II SD85_RS07860 PF00009 Elongation factor Tu GTP binding domain SD85_RS07860 PF03144 Elongation factor Tu domain 2 SD85_RS07865 PF14036 YlaH-like protein SD85_RS07870 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) SD85_RS07875 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) SD85_RS07880 PF13638 PIN domain SD85_RS07880 PF02562 PhoH-like protein SD85_RS07890 PF04960 Glutaminase SD85_RS07895 PF07408 Protein of unknown function (DUF1507) SD85_RS07900 PF01098 Cell cycle protein SD85_RS07905 PF02785 Biotin carboxylase C-terminal domain SD85_RS07905 PF00682 HMGL-like SD85_RS07905 PF02436 Conserved carboxylase domain SD85_RS07905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SD85_RS07905 PF00364 Biotin-requiring enzyme SD85_RS07905 PF00289 Biotin carboxylase, N-terminal domain SD85_RS07910 PF02628 Cytochrome oxidase assembly protein SD85_RS07915 PF01040 UbiA prenyltransferase family SD85_RS07920 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SD85_RS07920 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SD85_RS07920 PF00034 Cytochrome c SD85_RS07925 PF00115 Cytochrome C and Quinol oxidase polypeptide I SD85_RS07930 PF00510 Cytochrome c oxidase subunit III SD85_RS07935 PF03626 Prokaryotic Cytochrome C oxidase subunit IV SD85_RS07940 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) SD85_RS07945 PF08868 YugN-like family SD85_RS07950 PF00571 CBS domain SD85_RS07955 PF14504 CAP-associated N-terminal SD85_RS07955 PF00188 Cysteine-rich secretory protein family SD85_RS07960 PF14071 Putative coat protein SD85_RS07965 PF14003 YlbE-like protein SD85_RS07970 PF06133 Control of competence regulator ComK, YlbF/YmcA SD85_RS07975 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SD85_RS07985 PF01467 Cytidylyltransferase-like SD85_RS07990 PF07670 Nucleoside recognition SD85_RS07995 PF01734 Patatin-like phospholipase SD85_RS08000 PF13180 PDZ domain SD85_RS08000 PF05362 Lon protease (S16) C-terminal proteolytic domain SD85_RS08005 PF05636 HIGH Nucleotidyl Transferase SD85_RS08010 PF02620 Large ribosomal RNA subunit accumulation protein YceD SD85_RS08015 PF01783 Ribosomal L32p protein family SD85_RS08025 PF00583 Acetyltransferase (GNAT) family SD85_RS08030 PF08546 Ketopantoate reductase PanE/ApbA C terminal SD85_RS08030 PF02558 Ketopantoate reductase PanE/ApbA SD85_RS08035 PF10079 Bacillithiol biosynthesis BshC SD85_RS08040 PF02381 MraZ protein, putative antitoxin-like SD85_RS08045 PF01795 MraW methylase family SD85_RS08055 PF03793 PASTA domain SD85_RS08055 PF03717 Penicillin-binding Protein dimerisation domain SD85_RS08055 PF00905 Penicillin binding protein transpeptidase domain SD85_RS08065 PF00905 Penicillin binding protein transpeptidase domain SD85_RS08065 PF03793 PASTA domain SD85_RS08065 PF03717 Penicillin-binding Protein dimerisation domain SD85_RS08075 PF01225 Mur ligase family, catalytic domain SD85_RS08075 PF02875 Mur ligase family, glutamate ligase domain SD85_RS08075 PF08245 Mur ligase middle domain SD85_RS08085 PF00953 Glycosyl transferase family 4 SD85_RS08085 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SD85_RS08090 PF08245 Mur ligase middle domain SD85_RS08090 PF02875 Mur ligase family, glutamate ligase domain SD85_RS08095 PF01098 Cell cycle protein SD85_RS08100 PF04101 Glycosyltransferase family 28 C-terminal domain SD85_RS08100 PF03033 Glycosyltransferase family 28 N-terminal domain SD85_RS08105 PF01565 FAD binding domain SD85_RS08105 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SD85_RS08110 PF08478 POTRA domain, FtsQ-type SD85_RS08115 PF05949 Bacterial protein of unknown function (DUF881) SD85_RS08120 PF05949 Bacterial protein of unknown function (DUF881) SD85_RS08125 PF06947 Protein of unknown function (DUF1290) SD85_RS08130 PF02491 SHS2 domain inserted in FTSA SD85_RS08135 PF00091 Tubulin/FtsZ family, GTPase domain SD85_RS08135 PF12327 FtsZ family, C-terminal domain SD85_RS08140 PF05922 Peptidase inhibitor I9 SD85_RS08140 PF00082 Subtilase family SD85_RS08145 PF03419 Sporulation factor SpoIIGA SD85_RS08150 PF04542 Sigma-70 region 2 SD85_RS08150 PF04545 Sigma-70, region 4 SD85_RS08155 PF04539 Sigma-70 region 3 SD85_RS08155 PF04542 Sigma-70 region 2 SD85_RS08155 PF04545 Sigma-70, region 4 SD85_RS08160 PF00005 ABC transporter SD85_RS08165 PF01546 Peptidase family M20/M25/M40 SD85_RS08165 PF07687 Peptidase dimerisation domain SD85_RS08170 PF05239 PRC-barrel domain SD85_RS08175 PF02578 Multi-copper polyphenol oxidoreductase laccase SD85_RS08180 PF01168 Alanine racemase, N-terminal domain SD85_RS08185 PF04472 Cell division protein SepF SD85_RS08190 PF02325 YGGT family SD85_RS08195 PF17774 Putative RNA-binding domain in YlmH SD85_RS08195 PF01479 S4 domain SD85_RS08200 PF05103 DivIVA protein SD85_RS08205 PF08264 Anticodon-binding domain of tRNA SD85_RS08205 PF00133 tRNA synthetases class I (I, L, M and V) SD85_RS08210 PF01258 Prokaryotic dksA/traR C4-type zinc finger SD85_RS08215 PF01252 Signal peptidase (SPase) II SD85_RS08220 PF00849 RNA pseudouridylate synthase SD85_RS08220 PF01479 S4 domain SD85_RS08225 PF00156 Phosphoribosyl transferase domain SD85_RS08230 PF00860 Permease family SD85_RS08235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SD85_RS08235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SD85_RS08240 PF01979 Amidohydrolase family SD85_RS08245 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SD85_RS08245 PF00117 Glutamine amidotransferase class-I SD85_RS08250 PF02142 MGS-like domain SD85_RS08250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SD85_RS08250 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SD85_RS08255 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SD85_RS08255 PF00175 Oxidoreductase NAD-binding domain SD85_RS08260 PF01180 Dihydroorotate dehydrogenase SD85_RS08265 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SD85_RS08270 PF00156 Phosphoribosyl transferase domain SD85_RS08280 PF01507 Phosphoadenosine phosphosulfate reductase family SD85_RS08285 PF01384 Phosphate transporter family SD85_RS08290 PF14306 PUA-like domain SD85_RS08290 PF01747 ATP-sulfurylase SD85_RS08300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SD85_RS08305 PF01903 CbiX SD85_RS08315 PF05670 NFACT protein RNA binding domain SD85_RS08320 PF00689 Cation transporting ATPase, C-terminus SD85_RS08320 PF00690 Cation transporter/ATPase, N-terminus SD85_RS08325 PF08340 Domain of unknown function (DUF1732) SD85_RS08325 PF03755 YicC-like family, N-terminal region SD85_RS08330 PF04025 Domain of unknown function (DUF370) SD85_RS08335 PF00625 Guanylate kinase SD85_RS08340 PF01192 RNA polymerase Rpb6 SD85_RS08345 PF02441 Flavoprotein SD85_RS08345 PF04127 DNA / pantothenate metabolism flavoprotein SD85_RS08350 PF00271 Helicase conserved C-terminal domain SD85_RS08350 PF04851 Type III restriction enzyme, res subunit SD85_RS08350 PF18074 Primosomal protein N C-terminal domain SD85_RS08350 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SD85_RS08350 PF17764 3′ DNA-binding domain (3′BD) SD85_RS08355 PF01327 Polypeptide deformylase SD85_RS08360 PF02911 Formyl transferase, C-terminal domain SD85_RS08360 PF00551 Formyl transferase SD85_RS08365 PF01029 NusB family SD85_RS08365 PF01189 16S rRNA methyltransferase RsmB/F SD85_RS08370 PF04055 Radical SAM superfamily SD85_RS08380 PF00069 Protein kinase domain SD85_RS08380 PF03793 PASTA domain SD85_RS08385 PF16745 RsgA N-terminal domain SD85_RS08385 PF03193 RsgA GTPase SD85_RS08390 PF00834 Ribulose-phosphate 3 epimerase family SD85_RS08395 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SD85_RS08395 PF04263 Thiamin pyrophosphokinase, catalytic domain SD85_RS08400 PF08183 Stage V sporulation protein family SD85_RS08405 PF00830 Ribosomal L28 family SD85_RS08410 PF03780 Asp23 family, cell envelope-related function SD85_RS08415 PF13684 Dihydroxyacetone kinase family SD85_RS08415 PF02734 DAK2 domain SD85_RS08420 PF01842 ACT domain SD85_RS08420 PF03315 Serine dehydratase beta chain SD85_RS08425 PF03313 Serine dehydratase alpha chain SD85_RS08430 PF00270 DEAD/DEAH box helicase SD85_RS08430 PF00271 Helicase conserved C-terminal domain SD85_RS08430 PF17191 RecG wedge domain SD85_RS08435 PF03061 Thioesterase superfamily SD85_RS08440 PF02504 Fatty acid synthesis protein SD85_RS08445 PF00698 Acyl transferase domain SD85_RS08455 PF00550 Phosphopantetheine attachment site SD85_RS08460 PF00035 Double-stranded RNA binding motif SD85_RS08460 PF14622 Ribonuclease-III-like SD85_RS08465 PF06470 SMC proteins Flexible Hinge Domain SD85_RS08465 PF02463 RecF/RecN/SMC N terminal domain SD85_RS08470 PF00448 SRP54-type protein, GTPase domain SD85_RS08470 PF02881 SRP54-type protein, helical bundle domain SD85_RS08480 PF13333 Integrase core domain SD85_RS08480 PF13276 HTH-like domain SD85_RS08480 PF00665 Integrase core domain SD85_RS08485 PF02369 Bacterial Ig-like domain (group 1) SD85_RS08490 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SD85_RS08495 PF02978 Signal peptide binding domain SD85_RS08495 PF02881 SRP54-type protein, helical bundle domain SD85_RS08495 PF00448 SRP54-type protein, GTPase domain SD85_RS08500 PF00886 Ribosomal protein S16 SD85_RS08510 PF11068 YlqD protein SD85_RS08515 PF05239 PRC-barrel domain SD85_RS08515 PF01782 RimM N-terminal domain SD85_RS08520 PF01746 tRNA (Guanine-1)-methyltransferase SD85_RS08525 PF01245 Ribosomal protein L19 SD85_RS08530 PF01926 50S ribosome-binding GTPase SD85_RS08535 PF01351 Ribonuclease HII SD85_RS08545 PF01312 FlhB HrpN YscU SpaS Family SD85_RS08550 PF08442 ATP-grasp domain SD85_RS08550 PF00549 CoA-ligase SD85_RS08555 PF02629 CoA binding domain SD85_RS08555 PF00549 CoA-ligase SD85_RS08560 PF02481 DNA recombination-mediator protein A SD85_RS08565 PF01751 Toprim domain SD85_RS08565 PF01131 DNA topoisomerase SD85_RS08565 PF01396 Topoisomerase DNA binding C4 zinc finger SD85_RS08570 PF01134 Glucose inhibited division protein A SD85_RS08575 PF00589 Phage integrase family SD85_RS08575 PF02899 Phage integrase, N-terminal SAM-like domain SD85_RS08580 PF00227 Proteasome subunit SD85_RS08590 PF06018 CodY GAF-like domain SD85_RS08590 PF08222 CodY helix-turn-helix domain SD85_RS08595 PF00460 Flagella basal body rod protein SD85_RS08600 PF00460 Flagella basal body rod protein SD85_RS08600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SD85_RS08605 PF02049 Flagellar hook-basal body complex protein FliE SD85_RS08610 PF01514 Secretory protein of YscJ/FliF family SD85_RS08610 PF08345 Flagellar M-ring protein C-terminal SD85_RS08615 PF14842 FliG N-terminal domain SD85_RS08615 PF01706 FliG C-terminal domain SD85_RS08615 PF14841 FliG middle domain SD85_RS08620 PF02108 Flagellar assembly protein FliH SD85_RS08625 PF18269 T3SS EscN ATPase C-terminal domain SD85_RS08625 PF02874 ATP synthase alpha/beta family, beta-barrel domain SD85_RS08625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SD85_RS08630 PF02050 Flagellar FliJ protein SD85_RS08635 PF03448 MgtE intracellular N domain SD85_RS08640 PF02120 Flagellar hook-length control protein FliK SD85_RS08645 PF03963 Flagellar hook capping protein - N-terminal region SD85_RS08650 PF00460 Flagella basal body rod protein SD85_RS08650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SD85_RS08655 PF06289 Flagellar and Swarming motility proteins SD85_RS08660 PF03748 Flagellar basal body-associated protein FliL SD85_RS08665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SD85_RS08665 PF02154 Flagellar motor switch protein FliM SD85_RS08670 PF04509 CheC-like family SD85_RS08670 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SD85_RS08675 PF00072 Response regulator receiver domain SD85_RS08680 PF04347 Flagellar biosynthesis protein, FliO SD85_RS08685 PF00813 FliP family SD85_RS08690 PF01313 Bacterial export proteins, family 3 SD85_RS08695 PF01311 Bacterial export proteins, family 1 SD85_RS08700 PF01312 FlhB HrpN YscU SpaS Family SD85_RS08705 PF00771 FHIPEP family SD85_RS08710 PF00448 SRP54-type protein, GTPase domain SD85_RS08715 PF10609 NUBPL iron-transfer P-loop NTPase SD85_RS08720 PF00072 Response regulator receiver domain SD85_RS08720 PF01339 CheB methylesterase SD85_RS08725 PF07194 P2 response regulator binding domain SD85_RS08725 PF01627 Hpt domain SD85_RS08725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS08725 PF02895 Signal transducing histidine kinase, homodimeric domain SD85_RS08725 PF01584 CheW-like domain SD85_RS08730 PF01584 CheW-like domain SD85_RS08735 PF04509 CheC-like family SD85_RS08740 PF03975 CheD chemotactic sensory transduction SD85_RS08745 PF04545 Sigma-70, region 4 SD85_RS08745 PF04542 Sigma-70 region 2 SD85_RS08745 PF04539 Sigma-70 region 3 SD85_RS08755 PF00318 Ribosomal protein S2 SD85_RS08760 PF00889 Elongation factor TS SD85_RS08765 PF00696 Amino acid kinase family SD85_RS08770 PF01765 Ribosome recycling factor SD85_RS08775 PF01255 Putative undecaprenyl diphosphate synthase SD85_RS08785 PF13288 DXP reductoisomerase C-terminal domain SD85_RS08785 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SD85_RS08785 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SD85_RS08790 PF02163 Peptidase family M50 SD85_RS08790 PF17820 PDZ domain SD85_RS08795 PF04073 Aminoacyl-tRNA editing domain SD85_RS08795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SD85_RS08795 PF03129 Anticodon binding domain SD85_RS08800 PF14480 DNA polymerase III polC-type N-terminus I SD85_RS08800 PF11490 DNA polymerase III polC-type N-terminus II SD85_RS08800 PF07733 Bacterial DNA polymerase III alpha NTPase domain SD85_RS08800 PF02811 PHP domain SD85_RS08800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SD85_RS08800 PF00929 Exonuclease SD85_RS08800 PF14579 Helix-hairpin-helix motif SD85_RS08805 PF17384 RimP C-terminal SH3 domain SD85_RS08805 PF02576 RimP N-terminal domain SD85_RS08810 PF13184 NusA-like KH domain SD85_RS08810 PF00575 S1 RNA binding domain SD85_RS08810 PF08529 NusA N-terminal domain SD85_RS08815 PF04296 Protein of unknown function (DUF448) SD85_RS08820 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SD85_RS08825 PF00009 Elongation factor Tu GTP binding domain SD85_RS08825 PF11987 Translation-initiation factor 2 SD85_RS08825 PF04760 Translation initiation factor IF-2, N-terminal region SD85_RS08830 PF04456 Protein of unknown function (DUF503) SD85_RS08835 PF02033 Ribosome-binding factor A SD85_RS08840 PF01509 TruB family pseudouridylate synthase (N terminal domain) SD85_RS08840 PF16198 tRNA pseudouridylate synthase B C-terminal domain SD85_RS08845 PF01687 Riboflavin kinase SD85_RS08845 PF06574 FAD synthetase SD85_RS08850 PF00312 Ribosomal protein S15 SD85_RS08855 PF00575 S1 RNA binding domain SD85_RS08855 PF03725 3' exoribonuclease family, domain 2 SD85_RS08855 PF01138 3' exoribonuclease family, domain 1 SD85_RS08855 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SD85_RS08855 PF00013 KH domain SD85_RS08860 PF01522 Polysaccharide deacetylase SD85_RS08865 PF00675 Insulinase (Peptidase family M16) SD85_RS08865 PF05193 Peptidase M16 inactive domain SD85_RS08870 PF05239 PRC-barrel domain SD85_RS08875 PF16924 Dipicolinate synthase subunit A N-terminal domain SD85_RS08875 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SD85_RS08880 PF02441 Flavoprotein SD85_RS08885 PF01118 Semialdehyde dehydrogenase, NAD binding domain SD85_RS08885 PF02774 Semialdehyde dehydrogenase, dimerisation domain SD85_RS08890 PF13840 ACT domain SD85_RS08890 PF00696 Amino acid kinase family SD85_RS08895 PF00701 Dihydrodipicolinate synthetase family SD85_RS08900 PF00753 Metallo-beta-lactamase superfamily SD85_RS08900 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SD85_RS08900 PF17770 Ribonuclease J C-terminal domain SD85_RS08905 PF00574 Clp protease SD85_RS08910 PF14035 YlzJ-like protein SD85_RS08915 PF17854 FtsK alpha domain SD85_RS08915 PF09397 Ftsk gamma domain SD85_RS08915 PF01580 FtsK/SpoIIIE family SD85_RS08920 PF00392 Bacterial regulatory proteins, gntR family SD85_RS08920 PF07702 UTRA domain SD85_RS08925 PF07690 Major Facilitator Superfamily SD85_RS08930 PF05193 Peptidase M16 inactive domain SD85_RS08935 PF05193 Peptidase M16 inactive domain SD85_RS08935 PF00675 Insulinase (Peptidase family M16) SD85_RS08945 PF11588 Protein of unknown function (DUF3243) SD85_RS08950 PF11868 Protein of unknown function (DUF3388) SD85_RS08955 PF13464 Domain of unknown function (DUF4115) SD85_RS08960 PF01066 CDP-alcohol phosphatidyltransferase SD85_RS08965 PF02464 Competence-damaged protein SD85_RS08965 PF00994 Probable molybdopterin binding domain SD85_RS08965 PF18146 Damage-inducible protein CinA KH domain SD85_RS08970 PF00154 recA bacterial DNA recombination protein SD85_RS08975 PF00144 Beta-lactamase SD85_RS08980 PF01966 HD domain SD85_RS08980 PF12072 Domain of unknown function (DUF3552) SD85_RS08980 PF00013 KH domain SD85_RS08985 PF13277 YmdB-like protein SD85_RS08990 PF04232 Stage V sporulation protein S (SpoVS) SD85_RS08995 PF08240 Alcohol dehydrogenase GroES-like domain SD85_RS08995 PF00107 Zinc-binding dehydrogenase SD85_RS09000 PF00155 Aminotransferase class I and II SD85_RS09005 PF01938 TRAM domain SD85_RS09005 PF00919 Uncharacterized protein family UPF0004 SD85_RS09005 PF04055 Radical SAM superfamily SD85_RS09010 PF06133 Control of competence regulator ComK, YlbF/YmcA SD85_RS09015 PF10628 Outer spore coat protein E (CotE) SD85_RS09020 PF05188 MutS domain II SD85_RS09020 PF05190 MutS family domain IV SD85_RS09020 PF05192 MutS domain III SD85_RS09020 PF00488 MutS domain V SD85_RS09020 PF01624 MutS domain I SD85_RS09025 PF01119 DNA mismatch repair protein, C-terminal domain SD85_RS09025 PF08676 MutL C terminal dimerisation domain SD85_RS09035 PF14184 Regulatory protein YrvL SD85_RS09050 PF00440 Bacterial regulatory proteins, tetR family SD85_RS09050 PF13977 BetI-type transcriptional repressor, C-terminal SD85_RS09055 PF00753 Metallo-beta-lactamase superfamily SD85_RS09065 PF00698 Acyl transferase domain SD85_RS09070 PF00698 Acyl transferase domain SD85_RS09075 PF03060 Nitronate monooxygenase SD85_RS09075 PF00698 Acyl transferase domain SD85_RS09080 PF00550 Phosphopantetheine attachment site SD85_RS09085 PF00109 Beta-ketoacyl synthase, N-terminal domain SD85_RS09085 PF02801 Beta-ketoacyl synthase, C-terminal domain SD85_RS09090 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SD85_RS09090 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SD85_RS09095 PF00378 Enoyl-CoA hydratase/isomerase SD85_RS09100 PF00378 Enoyl-CoA hydratase/isomerase SD85_RS09105 PF16197 Ketoacyl-synthetase C-terminal extension SD85_RS09105 PF13193 AMP-binding enzyme C-terminal domain SD85_RS09105 PF14765 Polyketide synthase dehydratase SD85_RS09105 PF00550 Phosphopantetheine attachment site SD85_RS09105 PF08659 KR domain SD85_RS09105 PF02801 Beta-ketoacyl synthase, C-terminal domain SD85_RS09105 PF00109 Beta-ketoacyl synthase, N-terminal domain SD85_RS09105 PF00501 AMP-binding enzyme SD85_RS09105 PF00668 Condensation domain SD85_RS09110 PF08659 KR domain SD85_RS09110 PF02801 Beta-ketoacyl synthase, C-terminal domain SD85_RS09110 PF00550 Phosphopantetheine attachment site SD85_RS09110 PF00109 Beta-ketoacyl synthase, N-terminal domain SD85_RS09110 PF16197 Ketoacyl-synthetase C-terminal extension SD85_RS09110 PF14765 Polyketide synthase dehydratase SD85_RS09115 PF00550 Phosphopantetheine attachment site SD85_RS09115 PF08242 Methyltransferase domain SD85_RS09115 PF08659 KR domain SD85_RS09115 PF02801 Beta-ketoacyl synthase, C-terminal domain SD85_RS09115 PF00109 Beta-ketoacyl synthase, N-terminal domain SD85_RS09115 PF16197 Ketoacyl-synthetase C-terminal extension SD85_RS09115 PF14765 Polyketide synthase dehydratase SD85_RS09120 PF02801 Beta-ketoacyl synthase, C-terminal domain SD85_RS09120 PF00109 Beta-ketoacyl synthase, N-terminal domain SD85_RS09120 PF16197 Ketoacyl-synthetase C-terminal extension SD85_RS09120 PF00668 Condensation domain SD85_RS09120 PF13193 AMP-binding enzyme C-terminal domain SD85_RS09120 PF00501 AMP-binding enzyme SD85_RS09120 PF00550 Phosphopantetheine attachment site SD85_RS09120 PF08659 KR domain SD85_RS09120 PF14765 Polyketide synthase dehydratase SD85_RS09125 PF16197 Ketoacyl-synthetase C-terminal extension SD85_RS09125 PF00975 Thioesterase domain SD85_RS09125 PF00109 Beta-ketoacyl synthase, N-terminal domain SD85_RS09125 PF08242 Methyltransferase domain SD85_RS09125 PF00550 Phosphopantetheine attachment site SD85_RS09125 PF14765 Polyketide synthase dehydratase SD85_RS09125 PF02801 Beta-ketoacyl synthase, C-terminal domain SD85_RS09130 PF00067 Cytochrome P450 SD85_RS09145 PF00082 Subtilase family SD85_RS09155 PF05908 Poly-gamma-glutamate hydrolase SD85_RS09160 PF02566 OsmC-like protein SD85_RS09165 PF00893 Small Multidrug Resistance protein SD85_RS09170 PF00893 Small Multidrug Resistance protein SD85_RS09180 PF12788 YmaF family SD85_RS09190 PF17209 Hfq protein SD85_RS09195 PF14157 YmzC-like protein SD85_RS09205 PF07972 NrdI Flavodoxin like SD85_RS09210 PF02867 Ribonucleotide reductase, barrel domain SD85_RS09210 PF00317 Ribonucleotide reductase, all-alpha domain SD85_RS09210 PF08343 Ribonucleotide reductase N-terminal SD85_RS09215 PF00268 Ribonucleotide reductase, small chain SD85_RS09225 PF05036 Sporulation related domain SD85_RS09225 PF01520 N-acetylmuramoyl-L-alanine amidase SD85_RS09235 PF00004 ATPase family associated with various cellular activities (AAA) SD85_RS09235 PF17866 AAA lid domain SD85_RS09245 PF16360 GTP-binding GTPase Middle Region SD85_RS09245 PF13167 GTP-binding GTPase N-terminal SD85_RS09245 PF01926 50S ribosome-binding GTPase SD85_RS09250 PF06838 Methionine gamma-lyase SD85_RS09255 PF13411 MerR HTH family regulatory protein SD85_RS09260 PF03951 Glutamine synthetase, beta-Grasp domain SD85_RS09260 PF00120 Glutamine synthetase, catalytic domain SD85_RS09280 PF04616 Glycosyl hydrolases family 43 SD85_RS09280 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain SD85_RS09285 PF00480 ROK family SD85_RS09290 PF01261 Xylose isomerase-like TIM barrel SD85_RS09295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SD85_RS09295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SD85_RS09300 PF00457 Glycosyl hydrolases family 11 SD85_RS09310 PF00083 Sugar (and other) transporter SD85_RS09315 PF01168 Alanine racemase, N-terminal domain SD85_RS09315 PF00842 Alanine racemase, C-terminal domain SD85_RS09320 PF10903 Protein of unknown function (DUF2691) SD85_RS09325 PF00692 dUTPase SD85_RS09340 PF00303 Thymidylate synthase SD85_RS09345 PF15493 Domain of unknown function, YrpD SD85_RS09350 PF14037 YoqO-like protein SD85_RS09375 PF08327 Activator of Hsp90 ATPase homolog 1-like protein SD85_RS09390 PF02417 Chromate transporter SD85_RS09395 PF03323 Bacillus/Clostridium GerA spore germination protein SD85_RS09405 PF13761 Domain of unknown function (DUF4166) SD85_RS09410 PF14158 YndJ-like protein SD85_RS09420 PF05908 Poly-gamma-glutamate hydrolase SD85_RS09425 PF10710 Protein of unknown function (DUF2512) SD85_RS09430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_RS09445 PF00717 Peptidase S24-like SD85_RS09445 PF01726 LexA DNA binding domain SD85_RS09450 PF01476 LysM domain SD85_RS09455 PF00239 Resolvase, N terminal domain SD85_RS09460 PF05979 Bacterial protein of unknown function (DUF896) SD85_RS09465 PF00456 Transketolase, thiamine diphosphate binding domain SD85_RS09465 PF02780 Transketolase, C-terminal domain SD85_RS09465 PF02779 Transketolase, pyrimidine binding domain SD85_RS09470 PF10747 Sporulation inhibitor of replication protein SirA SD85_RS09475 PF03672 Uncharacterised protein family (UPF0154) SD85_RS09480 PF09388 Spo0E like sporulation regulatory protein SD85_RS09485 PF02683 Cytochrome C biogenesis protein transmembrane region SD85_RS09490 PF00072 Response regulator receiver domain SD85_RS09495 PF07301 Protein of unknown function (DUF1453) SD85_RS09500 PF11084 Protein of unknown function (DUF2621) SD85_RS09510 PF08179 Small acid-soluble spore protein P family SD85_RS09520 PF00694 Aconitase C-terminal domain SD85_RS09520 PF00330 Aconitase family (aconitate hydratase) SD85_RS09525 PF00578 AhpC/TSA family SD85_RS09530 PF13040 Fur-regulated basic protein B SD85_RS09535 PF08177 Small acid-soluble spore protein N family SD85_RS09545 PF03061 Thioesterase superfamily SD85_RS09555 PF01521 Iron-sulphur cluster biosynthesis SD85_RS09560 PF02660 Glycerol-3-phosphate acyltransferase SD85_RS09565 PF13380 CoA binding domain SD85_RS09570 PF01751 Toprim domain SD85_RS09570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS09570 PF00986 DNA gyrase B subunit, carboxyl terminus SD85_RS09570 PF00204 DNA gyrase B SD85_RS09575 PF03989 DNA gyrase C-terminal domain, beta-propeller SD85_RS09575 PF00521 DNA gyrase/topoisomerase IV, subunit A SD85_RS09590 PF01235 Sodium:alanine symporter family SD85_RS09595 PF00942 Cellulose binding domain SD85_RS09595 PF00150 Cellulase (glycosyl hydrolase family 5) SD85_RS09600 PF17452 Uncharacterized YnfE-like SD85_RS09605 PF04138 GtrA-like protein SD85_RS09610 PF00483 Nucleotidyl transferase SD85_RS09615 PF09335 SNARE associated Golgi protein SD85_RS09630 PF08863 YolD-like protein SD85_RS09640 PF01039 Carboxyl transferase domain SD85_RS09645 PF00378 Enoyl-CoA hydratase/isomerase SD85_RS09650 PF00682 HMGL-like SD85_RS09655 PF00364 Biotin-requiring enzyme SD85_RS09660 PF02785 Biotin carboxylase C-terminal domain SD85_RS09660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SD85_RS09660 PF00289 Biotin carboxylase, N-terminal domain SD85_RS09665 PF00501 AMP-binding enzyme SD85_RS09665 PF13193 AMP-binding enzyme C-terminal domain SD85_RS09670 PF02770 Acyl-CoA dehydrogenase, middle domain SD85_RS09670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SD85_RS09670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SD85_RS09685 PF02638 Glycosyl hydrolase-like 10 SD85_RS09690 PF07098 Protein of unknown function (DUF1360) SD85_RS09695 PF00668 Condensation domain SD85_RS09695 PF00550 Phosphopantetheine attachment site SD85_RS09695 PF13193 AMP-binding enzyme C-terminal domain SD85_RS09695 PF00975 Thioesterase domain SD85_RS09695 PF00501 AMP-binding enzyme SD85_RS09700 PF13193 AMP-binding enzyme C-terminal domain SD85_RS09700 PF00501 AMP-binding enzyme SD85_RS09700 PF00668 Condensation domain SD85_RS09700 PF00550 Phosphopantetheine attachment site SD85_RS09705 PF00550 Phosphopantetheine attachment site SD85_RS09705 PF00202 Aminotransferase class-III SD85_RS09705 PF00501 AMP-binding enzyme SD85_RS09705 PF13193 AMP-binding enzyme C-terminal domain SD85_RS09705 PF00668 Condensation domain SD85_RS09705 PF16197 Ketoacyl-synthetase C-terminal extension SD85_RS09705 PF00109 Beta-ketoacyl synthase, N-terminal domain SD85_RS09705 PF02801 Beta-ketoacyl synthase, C-terminal domain SD85_RS09710 PF00698 Acyl transferase domain SD85_RS09715 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SD85_RS09720 PF01263 Aldose 1-epimerase SD85_RS09725 PF01554 MatE SD85_RS09730 PF16800 IseA DL-endopeptidase inhibitor SD85_RS09750 PF01476 LysM domain SD85_RS09750 PF01471 Putative peptidoglycan binding domain SD85_RS09750 PF01510 N-acetylmuramoyl-L-alanine amidase SD85_RS09755 PF04688 SPP1 phage holin SD85_RS09760 PF10960 BhlA holin family SD85_RS09785 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SD85_RS09785 PF05257 CHAP domain SD85_RS09900 PF00589 Phage integrase family SD85_RS09920 PF00145 C-5 cytosine-specific DNA methylase SD85_RS09940 PF17356 Phage-like element PBSX protein XtrA SD85_RS09970 PF01381 Helix-turn-helix SD85_RS09995 PF00589 Phage integrase family SD85_RS10000 PF12728 Helix-turn-helix domain SD85_RS10010 PF03466 LysR substrate binding domain SD85_RS10010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_RS10020 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SD85_RS10020 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_RS10025 PF04898 Glutamate synthase central domain SD85_RS10025 PF01645 Conserved region in glutamate synthase SD85_RS10025 PF01493 GXGXG motif SD85_RS10025 PF00310 Glutamine amidotransferases class-II SD85_RS10030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_RS10030 PF03466 LysR substrate binding domain SD85_RS10035 PF01472 PUA domain SD85_RS10035 PF00696 Amino acid kinase family SD85_RS10040 PF03807 NADP oxidoreductase coenzyme F420-dependent SD85_RS10040 PF14748 Pyrroline-5-carboxylate reductase dimerisation SD85_RS10045 PF02334 Replication terminator protein SD85_RS10050 PF00067 Cytochrome P450 SD85_RS10055 PF00106 short chain dehydrogenase SD85_RS10060 PF06103 Bacterial protein of unknown function (DUF948) SD85_RS10070 PF13302 Acetyltransferase (GNAT) domain SD85_RS10085 PF00005 ABC transporter SD85_RS10095 PF07690 Major Facilitator Superfamily SD85_RS10100 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SD85_RS10100 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SD85_RS10105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SD85_RS10105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SD85_RS10110 PF01568 Molydopterin dinucleotide binding domain SD85_RS10110 PF00384 Molybdopterin oxidoreductase SD85_RS10110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SD85_RS10125 PF17094 Uncharacterised protein family (UPF0715) SD85_RS10135 PF13217 Protein of unknown function (DUF4025) SD85_RS10140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SD85_RS10140 PF05227 CHASE3 domain SD85_RS10140 PF00672 HAMP domain SD85_RS10145 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal SD85_RS10145 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal SD85_RS10150 PF03330 Lytic transglycolase SD85_RS10155 PF06912 Protein of unknown function (DUF1275) SD85_RS10160 PF00544 Pectate lyase SD85_RS10165 PF00106 short chain dehydrogenase SD85_RS10180 PF02586 SOS response associated peptidase (SRAP) SD85_RS10195 PF16302 Domain of unknown function (DUF4944) SD85_RS10220 PF04294 VanW like protein SD85_RS10225 PF11188 Protein of unknown function (DUF2975) SD85_RS10230 PF13443 Cro/C1-type HTH DNA-binding domain SD85_RS10235 PF05675 Protein of unknown function (DUF817) SD85_RS10240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_RS10240 PF03466 LysR substrate binding domain SD85_RS10245 PF00892 EamA-like transporter family SD85_RS10270 PF01965 DJ-1/PfpI family SD85_RS10285 PF18416 N-acetylglucosamine binding protein domain 2 SD85_RS10285 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading SD85_RS10290 PF05163 DinB family SD85_RS10295 PF13302 Acetyltransferase (GNAT) domain SD85_RS10300 PF18801 response regulator aspartate phosphatase H, N terminal SD85_RS10300 PF13176 Tetratricopeptide repeat SD85_RS10310 PF00817 impB/mucB/samB family SD85_RS10310 PF11798 IMS family HHH motif SD85_RS10310 PF11799 impB/mucB/samB family C-terminal domain SD85_RS10315 PF00535 Glycosyl transferase family 2 SD85_RS10320 PF00535 Glycosyl transferase family 2 SD85_RS10355 PF00589 Phage integrase family SD85_RS10355 PF02899 Phage integrase, N-terminal SAM-like domain SD85_RS10370 PF00722 Glycosyl hydrolases family 16 SD85_RS10375 PF09346 SMI1 / KNR4 family (SUKH-1) SD85_RS10380 PF01593 Flavin containing amine oxidoreductase SD85_RS10385 PF01588 Putative tRNA binding domain SD85_RS10390 PF12833 Helix-turn-helix domain SD85_RS10390 PF07883 Cupin domain SD85_RS10395 PF00583 Acetyltransferase (GNAT) family SD85_RS10405 PF13305 Tetracyclin repressor-like, C-terminal domain SD85_RS10405 PF00440 Bacterial regulatory proteins, tetR family SD85_RS10415 PF06445 GyrI-like small molecule binding domain SD85_RS10420 PF13280 WYL domain SD85_RS10420 PF08279 HTH domain SD85_RS10430 PF01022 Bacterial regulatory protein, arsR family SD85_RS10440 PF04238 Protein of unknown function (DUF420) SD85_RS10445 PF18846 Bacterial archaeo-eukaryotic release factor family 5 SD85_RS10455 PF17676 LD-carboxypeptidase C-terminal domain SD85_RS10455 PF02016 LD-carboxypeptidase N-terminal domain SD85_RS10460 PF00487 Fatty acid desaturase SD85_RS10465 PF07730 Histidine kinase SD85_RS10470 PF00196 Bacterial regulatory proteins, luxR family SD85_RS10470 PF00072 Response regulator receiver domain SD85_RS10475 PF00474 Sodium:solute symporter family SD85_RS10480 PF06725 3D domain SD85_RS10480 PF01476 LysM domain SD85_RS10485 PF00271 Helicase conserved C-terminal domain SD85_RS10485 PF00270 DEAD/DEAH box helicase SD85_RS10485 PF00570 HRDC domain SD85_RS10485 PF16124 RecQ zinc-binding SD85_RS10485 PF09382 RQC domain SD85_RS10490 PF02525 Flavodoxin-like fold SD85_RS10495 PF01258 Prokaryotic dksA/traR C4-type zinc finger SD85_RS10500 PF08000 Bacterial PH domain SD85_RS10510 PF00171 Aldehyde dehydrogenase family SD85_RS10515 PF13249 Squalene-hopene cyclase N-terminal domain SD85_RS10515 PF13243 Squalene-hopene cyclase C-terminal domain SD85_RS10520 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SD85_RS10520 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SD85_RS10525 PF00209 Sodium:neurotransmitter symporter family SD85_RS10530 PF01758 Sodium Bile acid symporter family SD85_RS10535 PF02817 e3 binding domain SD85_RS10535 PF00364 Biotin-requiring enzyme SD85_RS10535 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SD85_RS10540 PF16870 2-oxoglutarate dehydrogenase C-terminal SD85_RS10540 PF00676 Dehydrogenase E1 component SD85_RS10540 PF02779 Transketolase, pyrimidine binding domain SD85_RS10545 PF00092 von Willebrand factor type A domain SD85_RS10550 PF07728 AAA domain (dynein-related subfamily) SD85_RS10555 PF13627 Prokaryotic lipoprotein-attachment site SD85_RS10555 PF00080 Copper/zinc superoxide dismutase (SODC) SD85_RS10560 PF01476 LysM domain SD85_RS10560 PF00877 NlpC/P60 family SD85_RS10565 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase SD85_RS10570 PF02457 DisA bacterial checkpoint controller nucleotide-binding SD85_RS10570 PF10372 Bacterial membrane-spanning protein N-terminus SD85_RS10575 PF01554 MatE SD85_RS10580 PF01740 STAS domain SD85_RS10585 PF02585 GlcNAc-PI de-N-acetylase SD85_RS10590 PF08830 Protein of unknown function (DUF1806) SD85_RS10600 PF00892 EamA-like transporter family SD85_RS10615 PF14552 Tautomerase enzyme SD85_RS10620 PF01638 HxlR-like helix-turn-helix SD85_RS10625 PF00881 Nitroreductase family SD85_RS10630 PF01738 Dienelactone hydrolase family SD85_RS10640 PF11755 Protein of unknown function (DUF3311) SD85_RS10645 PF00474 Sodium:solute symporter family SD85_RS10650 PF03572 Peptidase family S41 SD85_RS10650 PF17820 PDZ domain SD85_RS10650 PF01471 Putative peptidoglycan binding domain SD85_RS10655 PF08241 Methyltransferase domain SD85_RS10665 PF02557 D-alanyl-D-alanine carboxypeptidase SD85_RS10670 PF01048 Phosphorylase superfamily SD85_RS10680 PF14191 YodL-like SD85_RS10685 PF01569 PAP2 superfamily SD85_RS10690 PF14162 YozD-like protein SD85_RS10705 PF06855 YozE SAM-like fold SD85_RS10710 PF14122 YokU-like protein, putative antitoxin SD85_RS10715 PF12544 Lysine-2,3-aminomutase SD85_RS10720 PF00583 Acetyltransferase (GNAT) family SD85_RS10725 PF07687 Peptidase dimerisation domain SD85_RS10725 PF01546 Peptidase family M20/M25/M40 SD85_RS10730 PF01144 Coenzyme A transferase SD85_RS10735 PF01144 Coenzyme A transferase SD85_RS10740 PF00202 Aminotransferase class-III SD85_RS10755 PF00583 Acetyltransferase (GNAT) family SD85_RS10760 PF00535 Glycosyl transferase family 2 SD85_RS10775 PF12996 DUF based on E. rectale Gene description (DUF3880) SD85_RS10780 PF02333 Phytase SD85_RS10785 PF02719 Polysaccharide biosynthesis protein SD85_RS10785 PF08485 Polysaccharide biosynthesis protein C-terminal SD85_RS10790 PF01641 SelR domain SD85_RS10795 PF01625 Peptide methionine sulfoxide reductase SD85_RS10800 PF01047 MarR family SD85_RS10805 PF01554 MatE SD85_RS10810 PF17431 Uncharacterized YmpT-like SD85_RS10815 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) SD85_RS10820 PF13472 GDSL-like Lipase/Acylhydrolase family SD85_RS10825 PF02630 SCO1/SenC SD85_RS10835 PF10751 Protein of unknown function (DUF2535) SD85_RS10840 PF00291 Pyridoxal-phosphate dependent enzyme SD85_RS10840 PF00585 C-terminal regulatory domain of Threonine dehydratase SD85_RS10845 PF08461 Ribonuclease R winged-helix domain SD85_RS10845 PF00158 Sigma-54 interaction domain SD85_RS10850 PF03006 Haemolysin-III related SD85_RS10860 PF00186 Dihydrofolate reductase SD85_RS10865 PF00303 Thymidylate synthase SD85_RS10870 PF04608 Phosphatidylglycerophosphatase A SD85_RS10875 PF14005 YpjP-like protein SD85_RS10880 PF04445 Putative SAM-dependent methyltransferase SD85_RS10885 PF06491 Disulphide isomerase SD85_RS10890 PF00920 Dehydratase family SD85_RS10895 PF08712 Scaffold protein Nfu/NifU N terminal SD85_RS10895 PF13769 Virulence factor SD85_RS10900 PF01966 HD domain SD85_RS10905 PF00255 Glutathione peroxidase SD85_RS10910 PF04204 Homoserine O-succinyltransferase SD85_RS10915 PF00534 Glycosyl transferases group 1 SD85_RS10915 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase SD85_RS10920 PF00313 'Cold-shock' DNA-binding domain SD85_RS10930 PF10819 Protein of unknown function (DUF2564) SD85_RS10935 PF10782 Zinc-finger SD85_RS10940 PF13456 Reverse transcriptase-like SD85_RS10945 PF02592 Putative vitamin uptake transporter SD85_RS10950 PF13456 Reverse transcriptase-like SD85_RS10960 PF01367 5'-3' exonuclease, C-terminal SAM fold SD85_RS10960 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SD85_RS10970 PF10752 Protein of unknown function (DUF2533) SD85_RS10975 PF00350 Dynamin family SD85_RS10980 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SD85_RS10985 PF00195 Chalcone and stilbene synthases, N-terminal domain SD85_RS10985 PF02797 Chalcone and stilbene synthases, C-terminal domain SD85_RS10990 PF00860 Permease family SD85_RS10995 PF00156 Phosphoribosyl transferase domain SD85_RS11000 PF02074 Carboxypeptidase Taq (M32) metallopeptidase SD85_RS11005 PF03812 2-keto-3-deoxygluconate permease SD85_RS11010 PF01081 KDPG and KHG aldolase SD85_RS11015 PF00294 pfkB family carbohydrate kinase SD85_RS11020 PF00356 Bacterial regulatory proteins, lacI family SD85_RS11025 PF04962 KduI/IolB family SD85_RS11035 PF13307 Helicase C-terminal domain SD85_RS11045 PF02926 THUMP domain SD85_RS11045 PF01170 Putative RNA methylase family UPF0020 SD85_RS11050 PF05103 DivIVA protein SD85_RS11055 PF06908 YspA SLOG family SD85_RS11060 PF11122 Inner spore coat protein D SD85_RS11070 PF13482 RNase_H superfamily SD85_RS11075 PF00270 DEAD/DEAH box helicase SD85_RS11075 PF00271 Helicase conserved C-terminal domain SD85_RS11075 PF09369 Domain of unknown function (DUF1998) SD85_RS11080 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SD85_RS11090 PF14179 YppG-like protein SD85_RS11095 PF14178 YppF-like protein SD85_RS11100 PF08807 Bacterial domain of unknown function (DUF1798) SD85_RS11105 PF17522 Family of unknown function (DUF5446) SD85_RS11115 PF10720 Protein of unknown function (DUF2515) SD85_RS11120 PF03838 Recombination protein U SD85_RS11125 PF00912 Transglycosylase SD85_RS11125 PF00905 Penicillin binding protein transpeptidase domain SD85_RS11135 PF00730 HhH-GPD superfamily base excision DNA repair protein SD85_RS11135 PF00633 Helix-hairpin-helix motif SD85_RS11135 PF10576 Iron-sulfur binding domain of endonuclease III SD85_RS11140 PF07261 Replication initiation and membrane attachment SD85_RS11145 PF00152 tRNA synthetases class II (D, K and N) SD85_RS11145 PF01336 OB-fold nucleic acid binding domain SD85_RS11150 PF00155 Aminotransferase class I and II SD85_RS11155 PF03413 Peptidase propeptide and YPEB domain SD85_RS11155 PF17881 Domain of unknown function (DUF5590) SD85_RS11160 PF14084 Protein of unknown function (DUF4264) SD85_RS11165 PF00929 Exonuclease SD85_RS11165 PF04851 Type III restriction enzyme, res subunit SD85_RS11165 PF13307 Helicase C-terminal domain SD85_RS11170 PF02261 Aspartate decarboxylase SD85_RS11175 PF02569 Pantoate-beta-alanine ligase SD85_RS11180 PF02548 Ketopantoate hydroxymethyltransferase SD85_RS11185 PF02237 Biotin protein ligase C terminal domain SD85_RS11185 PF03099 Biotin/lipoate A/B protein ligase family SD85_RS11185 PF08279 HTH domain SD85_RS11190 PF13735 tRNA nucleotidyltransferase domain 2 putative SD85_RS11190 PF12627 Probable RNA and SrmB- binding site of polymerase A SD85_RS11190 PF01743 Poly A polymerase head domain SD85_RS11195 PF13439 Glycosyltransferase Family 4 SD85_RS11195 PF00534 Glycosyl transferases group 1 SD85_RS11200 PF02585 GlcNAc-PI de-N-acetylase SD85_RS11205 PF02142 MGS-like domain SD85_RS11210 PF01113 Dihydrodipicolinate reductase, N-terminus SD85_RS11210 PF05173 Dihydrodipicolinate reductase, C-terminus SD85_RS11215 PF03819 MazG nucleotide pyrophosphohydrolase domain SD85_RS11220 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SD85_RS11220 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SD85_RS11225 PF09577 Sporulation protein YpjB (SpoYpjB) SD85_RS11230 PF07187 Protein of unknown function (DUF1405) SD85_RS11235 PF00032 Cytochrome b(C-terminal)/b6/petD SD85_RS11235 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SD85_RS11240 PF00033 Cytochrome b/b6/petB SD85_RS11245 PF00355 Rieske [2Fe-2S] domain SD85_RS11250 PF10673 Protein of unknown function (DUF2487) SD85_RS11255 PF08858 IDEAL domain SD85_RS11255 PF08864 UPF0302 domain SD85_RS11265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SD85_RS11270 PF02153 Prephenate dehydrogenase SD85_RS11270 PF01842 ACT domain SD85_RS11275 PF00155 Aminotransferase class I and II SD85_RS11280 PF00290 Tryptophan synthase alpha chain SD85_RS11285 PF00291 Pyridoxal-phosphate dependent enzyme SD85_RS11290 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SD85_RS11295 PF00218 Indole-3-glycerol phosphate synthase SD85_RS11300 PF00591 Glycosyl transferase family, a/b domain SD85_RS11300 PF02885 Glycosyl transferase family, helical bundle domain SD85_RS11305 PF04715 Anthranilate synthase component I, N terminal region SD85_RS11305 PF00425 chorismate binding enzyme SD85_RS11310 PF07736 Chorismate mutase type I SD85_RS11315 PF01761 3-dehydroquinate synthase SD85_RS11320 PF01264 Chorismate synthase SD85_RS11325 PF01739 CheR methyltransferase, SAM binding domain SD85_RS11325 PF03705 CheR methyltransferase, all-alpha domain SD85_RS11335 PF00334 Nucleoside diphosphate kinase SD85_RS11340 PF00348 Polyprenyl synthetase SD85_RS11345 PF01209 ubiE/COQ5 methyltransferase family SD85_RS11350 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 SD85_RS11355 PF02081 Tryptophan RNA-binding attenuator protein SD85_RS11360 PF01227 GTP cyclohydrolase I SD85_RS11365 PF00216 Bacterial DNA-binding protein SD85_RS11370 PF09547 Stage IV sporulation protein A (spore_IV_A) SD85_RS11380 PF10966 Protein of unknown function (DUF2768) SD85_RS11385 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SD85_RS11385 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SD85_RS11390 PF01926 50S ribosome-binding GTPase SD85_RS11390 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SD85_RS11400 PF14045 YIEGIA protein SD85_RS11410 PF14140 YpzI-like protein SD85_RS11415 PF01070 FMN-dependent dehydrogenase SD85_RS11420 PF00575 S1 RNA binding domain SD85_RS11425 PF02224 Cytidylate kinase SD85_RS11430 PF17313 Family of unknown function (DUF5359) SD85_RS11435 PF12945 Flagellar protein YcgR SD85_RS11435 PF07238 PilZ domain SD85_RS11440 PF14620 YpeB sporulation SD85_RS11440 PF03413 Peptidase propeptide and YPEB domain SD85_RS11445 PF07486 Cell Wall Hydrolase SD85_RS11445 PF01471 Putative peptidoglycan binding domain SD85_RS11450 PF13367 PrsW family intramembrane metalloprotease SD85_RS11460 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SD85_RS11460 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SD85_RS11465 PF05389 Negative regulator of genetic competence (MecA) SD85_RS11470 PF00149 Calcineurin-like phosphoesterase SD85_RS11475 PF10864 Protein of unknown function (DUF2663) SD85_RS11480 PF01476 LysM domain SD85_RS11485 PF02517 CPBP intramembrane metalloprotease SD85_RS11490 PF00270 DEAD/DEAH box helicase SD85_RS11490 PF00271 Helicase conserved C-terminal domain SD85_RS11495 PF14493 Helix-turn-helix domain SD85_RS11505 PF12822 ECF transporter, substrate-specific component SD85_RS11515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SD85_RS11515 PF01842 ACT domain SD85_RS11515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SD85_RS11520 PF01487 Type I 3-dehydroquinase SD85_RS11530 PF04542 Sigma-70 region 2 SD85_RS11530 PF08281 Sigma-70, region 4 SD85_RS11535 PF00989 PAS fold SD85_RS11535 PF00512 His Kinase A (phospho-acceptor) domain SD85_RS11535 PF18698 Histidine kinase sensor domain SD85_RS11535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS11535 PF00672 HAMP domain SD85_RS11540 PF00072 Response regulator receiver domain SD85_RS11540 PF00486 Transcriptional regulatory protein, C terminal SD85_RS11545 PF01578 Cytochrome C assembly protein SD85_RS11550 PF05140 ResB-like family SD85_RS11555 PF00578 AhpC/TSA family SD85_RS11560 PF00849 RNA pseudouridylate synthase SD85_RS11560 PF01479 S4 domain SD85_RS11565 PF07670 Nucleoside recognition SD85_RS11570 PF07670 Nucleoside recognition SD85_RS11575 PF07943 Penicillin-binding protein 5, C-terminal domain SD85_RS11575 PF00768 D-alanyl-D-alanine carboxypeptidase SD85_RS11580 PF13047 Protein of unknown function (DUF3907) SD85_RS11585 PF04079 Segregation and condensation complex subunit ScpB SD85_RS11590 PF02616 Segregation and condensation protein ScpA SD85_RS11595 PF03745 Domain of unknown function (DUF309) SD85_RS11600 PF00583 Acetyltransferase (GNAT) family SD85_RS11605 PF00885 6,7-dimethyl-8-ribityllumazine synthase SD85_RS11610 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SD85_RS11610 PF00925 GTP cyclohydrolase II SD85_RS11615 PF00677 Lumazine binding domain SD85_RS11620 PF01872 RibD C-terminal domain SD85_RS11620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SD85_RS11630 PF10502 Signal peptidase, peptidase S26 SD85_RS11635 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) SD85_RS11645 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SD85_RS11655 PF06207 Protein of unknown function (DUF1002) SD85_RS11660 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SD85_RS11660 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SD85_RS11665 PF03323 Bacillus/Clostridium GerA spore germination protein SD85_RS11670 PF14097 Stage V sporulation protein AE1 SD85_RS11675 PF03862 SpoVAC/SpoVAEB sporulation membrane protein SD85_RS11680 PF07451 Stage V sporulation protein AD (SpoVAD) SD85_RS11685 PF03862 SpoVAC/SpoVAEB sporulation membrane protein SD85_RS11690 PF13782 Stage V sporulation protein AB SD85_RS11695 PF12164 Stage V sporulation protein AA SD85_RS11700 PF04539 Sigma-70 region 3 SD85_RS11700 PF04542 Sigma-70 region 2 SD85_RS11700 PF04545 Sigma-70, region 4 SD85_RS11705 PF13581 Histidine kinase-like ATPase domain SD85_RS11710 PF01740 STAS domain SD85_RS11715 PF07943 Penicillin-binding protein 5, C-terminal domain SD85_RS11715 PF00768 D-alanyl-D-alanine carboxypeptidase SD85_RS11720 PF01048 Phosphorylase superfamily SD85_RS11725 PF01676 Metalloenzyme superfamily SD85_RS11730 PF02899 Phage integrase, N-terminal SAM-like domain SD85_RS11730 PF00589 Phage integrase family SD85_RS11735 PF14004 Protein of unknown function (DUF4227) SD85_RS11740 PF01475 Ferric uptake regulator family SD85_RS11745 PF01944 Stage II sporulation protein M SD85_RS11755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SD85_RS11755 PF03949 Malic enzyme, NAD binding domain SD85_RS11755 PF00390 Malic enzyme, N-terminal domain SD85_RS11760 PF03553 Na+/H+ antiporter family SD85_RS11765 PF10415 Fumarase C C-terminus SD85_RS11765 PF00206 Lyase SD85_RS11770 PF00710 Asparaginase, N-terminal SD85_RS11770 PF17763 Glutaminase/Asparaginase C-terminal domain SD85_RS11775 PF01381 Helix-turn-helix SD85_RS11785 PF13333 Integrase core domain SD85_RS11785 PF00665 Integrase core domain SD85_RS11785 PF13276 HTH-like domain SD85_RS11795 PF00293 NUDIX domain SD85_RS11800 PF13072 Mother cell inhibitor of FtsZ SD85_RS11805 PF00248 Aldo/keto reductase family SD85_RS11810 PF13025 Protein of unknown function (DUF3886) SD85_RS11815 PF12146 Serine aminopeptidase, S33 SD85_RS11820 PF01098 Cell cycle protein SD85_RS11825 PF01098 Cell cycle protein SD85_RS11830 PF06803 Protein of unknown function (DUF1232) SD85_RS11835 PF10827 Protein of unknown function (DUF2552) SD85_RS11840 PF01521 Iron-sulphur cluster biosynthesis SD85_RS11845 PF13673 Acetyltransferase (GNAT) domain SD85_RS11845 PF04229 GrpB protein SD85_RS11850 PF03992 Antibiotic biosynthesis monooxygenase SD85_RS11855 PF00583 Acetyltransferase (GNAT) family SD85_RS11860 PF08863 YolD-like protein SD85_RS11865 PF11799 impB/mucB/samB family C-terminal domain SD85_RS11865 PF00817 impB/mucB/samB family SD85_RS11870 PF14164 YqzH-like protein SD85_RS11880 PF07690 Major Facilitator Superfamily SD85_RS11895 PF00485 Phosphoribulokinase / Uridine kinase family SD85_RS11900 PF00291 Pyridoxal-phosphate dependent enzyme SD85_RS11905 PF00106 short chain dehydrogenase SD85_RS11910 PF00753 Metallo-beta-lactamase superfamily SD85_RS11915 PF14748 Pyrroline-5-carboxylate reductase dimerisation SD85_RS11915 PF03807 NADP oxidoreductase coenzyme F420-dependent SD85_RS11920 PF01546 Peptidase family M20/M25/M40 SD85_RS11925 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SD85_RS11930 PF12146 Serine aminopeptidase, S33 SD85_RS11945 PF00471 Ribosomal protein L33 SD85_RS11950 PF12706 Beta-lactamase superfamily domain SD85_RS11955 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SD85_RS11955 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SD85_RS11960 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SD85_RS11960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SD85_RS11965 PF11799 impB/mucB/samB family C-terminal domain SD85_RS11965 PF11798 IMS family HHH motif SD85_RS11965 PF00817 impB/mucB/samB family SD85_RS11975 PF02096 60Kd inner membrane protein SD85_RS11980 PF09844 Uncharacterized conserved protein (COG2071) SD85_RS11985 PF01546 Peptidase family M20/M25/M40 SD85_RS11985 PF07687 Peptidase dimerisation domain SD85_RS11990 PF01039 Carboxyl transferase domain SD85_RS12005 PF03734 L,D-transpeptidase catalytic domain SD85_RS12010 PF06081 Aromatic acid exporter family member 1 SD85_RS12010 PF11728 Putative aromatic acid exporter C-terminal domain SD85_RS12015 PF00005 ABC transporter SD85_RS12020 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS12025 PF00497 Bacterial extracellular solute-binding proteins, family 3 SD85_RS12030 PF06491 Disulphide isomerase SD85_RS12035 PF00781 Diacylglycerol kinase catalytic domain SD85_RS12040 PF07690 Major Facilitator Superfamily SD85_RS12045 PF06445 GyrI-like small molecule binding domain SD85_RS12045 PF13411 MerR HTH family regulatory protein SD85_RS12050 PF00364 Biotin-requiring enzyme SD85_RS12050 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SD85_RS12050 PF02817 e3 binding domain SD85_RS12055 PF02780 Transketolase, C-terminal domain SD85_RS12055 PF02779 Transketolase, pyrimidine binding domain SD85_RS12060 PF00676 Dehydrogenase E1 component SD85_RS12065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SD85_RS12065 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_RS12070 PF00871 Acetokinase family SD85_RS12075 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SD85_RS12075 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SD85_RS12080 PF01515 Phosphate acetyl/butaryl transferase SD85_RS12085 PF00158 Sigma-54 interaction domain SD85_RS12085 PF00989 PAS fold SD85_RS12085 PF02954 Bacterial regulatory protein, Fis family SD85_RS12090 PF11118 Protein of unknown function (DUF2627) SD85_RS12100 PF03972 MmgE/PrpD family SD85_RS12105 PF00285 Citrate synthase, C-terminal domain SD85_RS12110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SD85_RS12110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SD85_RS12110 PF02770 Acyl-CoA dehydrogenase, middle domain SD85_RS12115 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SD85_RS12115 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SD85_RS12120 PF02803 Thiolase, C-terminal domain SD85_RS12120 PF00108 Thiolase, N-terminal domain SD85_RS12125 PF03009 Glycerophosphoryl diester phosphodiesterase family SD85_RS12130 PF01520 N-acetylmuramoyl-L-alanine amidase SD85_RS12145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SD85_RS12155 PF08769 Sporulation initiation factor Spo0A C terminal SD85_RS12155 PF00072 Response regulator receiver domain SD85_RS12165 PF17820 PDZ domain SD85_RS12165 PF05580 SpoIVB peptidase S55 SD85_RS12170 PF13476 AAA domain SD85_RS12175 PF01316 Arginine repressor, DNA binding domain SD85_RS12175 PF02863 Arginine repressor, C-terminal domain SD85_RS12180 PF01479 S4 domain SD85_RS12180 PF01728 FtsJ-like methyltransferase SD85_RS12185 PF02780 Transketolase, C-terminal domain SD85_RS12185 PF02779 Transketolase, pyrimidine binding domain SD85_RS12185 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SD85_RS12190 PF00348 Polyprenyl synthetase SD85_RS12195 PF02609 Exonuclease VII small subunit SD85_RS12200 PF13742 OB-fold nucleic acid binding domain SD85_RS12200 PF02601 Exonuclease VII, large subunit SD85_RS12205 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SD85_RS12205 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SD85_RS12210 PF01029 NusB family SD85_RS12215 PF03780 Asp23 family, cell envelope-related function SD85_RS12220 PF02785 Biotin carboxylase C-terminal domain SD85_RS12220 PF00289 Biotin carboxylase, N-terminal domain SD85_RS12220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SD85_RS12225 PF00364 Biotin-requiring enzyme SD85_RS12230 PF12685 SpoIIIAH-like protein SD85_RS12240 PF09581 Stage III sporulation protein AF (Spore_III_AF) SD85_RS12245 PF09546 Stage III sporulation protein AE (spore_III_AE) SD85_RS12250 PF06686 Stage III sporulation protein AC/AD protein family SD85_RS12255 PF06686 Stage III sporulation protein AC/AD protein family SD85_RS12260 PF09548 Stage III sporulation protein AB (spore_III_AB) SD85_RS12270 PF10942 Protein of unknown function (DUF2619) SD85_RS12275 PF01132 Elongation factor P (EF-P) OB domain SD85_RS12275 PF08207 Elongation factor P (EF-P) KOW-like domain SD85_RS12275 PF09285 Elongation factor P, C-terminal SD85_RS12280 PF00557 Metallopeptidase family M24 SD85_RS12280 PF01321 Creatinase/Prolidase N-terminal domain SD85_RS12285 PF01220 Dehydroquinase class II SD85_RS12290 PF11085 Conserved membrane protein YqhR SD85_RS12295 PF07136 Protein of unknown function (DUF1385) SD85_RS12305 PF01734 Patatin-like phospholipase SD85_RS12310 PF02742 Iron dependent repressor, metal binding and dimerisation domain SD85_RS12310 PF01325 Iron dependent repressor, N-terminal DNA binding domain SD85_RS12315 PF03099 Biotin/lipoate A/B protein ligase family SD85_RS12320 PF00581 Rhodanese-like domain SD85_RS12325 PF02347 Glycine cleavage system P-protein SD85_RS12330 PF02347 Glycine cleavage system P-protein SD85_RS12335 PF01571 Aminomethyltransferase folate-binding domain SD85_RS12335 PF08669 Glycine cleavage T-protein C-terminal barrel domain SD85_RS12340 PF00271 Helicase conserved C-terminal domain SD85_RS12340 PF00176 SNF2 family N-terminal domain SD85_RS12345 PF11079 Bacterial protein YqhG of unknown function SD85_RS12350 PF08671 Anti-repressor SinI SD85_RS12355 PF01381 Helix-turn-helix SD85_RS12355 PF08671 Anti-repressor SinI SD85_RS12360 PF12389 Camelysin metallo-endopeptidase SD85_RS12375 PF13028 Protein of unknown function (DUF3889) SD85_RS12380 PF14038 YqzE-like protein SD85_RS12385 PF14173 ComG operon protein 7 SD85_RS12390 PF15980 Putative Competence protein ComGF SD85_RS12400 PF07963 Prokaryotic N-terminal methylation motif SD85_RS12405 PF07963 Prokaryotic N-terminal methylation motif SD85_RS12410 PF00482 Type II secretion system (T2SS), protein F SD85_RS12415 PF00437 Type II/IV secretion system protein SD85_RS12420 PF00571 CBS domain SD85_RS12425 PF01544 CorA-like Mg2+ transporter protein SD85_RS12430 PF03471 Transporter associated domain SD85_RS12430 PF01595 Cyclin M transmembrane N-terminal domain SD85_RS12430 PF00571 CBS domain SD85_RS12435 PF01740 STAS domain SD85_RS12435 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain SD85_RS12445 PF03960 ArsC family SD85_RS12450 PF11117 Protein of unknown function (DUF2626) SD85_RS12455 PF00753 Metallo-beta-lactamase superfamily SD85_RS12460 PF10958 Protein of unknown function (DUF2759) SD85_RS12465 PF01910 Thiamine-binding protein SD85_RS12475 PF00246 Zinc carboxypeptidase SD85_RS12480 PF00884 Sulfatase SD85_RS12485 PF00480 ROK family SD85_RS12490 PF06014 Bacterial protein of unknown function (DUF910) SD85_RS12495 PF01694 Rhomboid family SD85_RS12505 PF01812 5-formyltetrahydrofolate cyclo-ligase family SD85_RS12510 PF00471 Ribosomal protein L33 SD85_RS12515 PF13439 Glycosyltransferase Family 4 SD85_RS12515 PF00534 Glycosyl transferases group 1 SD85_RS12535 PF00005 ABC transporter SD85_RS12540 PF00005 ABC transporter SD85_RS12545 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS12550 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS12555 PF12849 PBP superfamily domain SD85_RS12560 PF00905 Penicillin binding protein transpeptidase domain SD85_RS12560 PF03717 Penicillin-binding Protein dimerisation domain SD85_RS12565 PF07690 Major Facilitator Superfamily SD85_RS12570 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SD85_RS12570 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SD85_RS12575 PF04306 Protein of unknown function (DUF456) SD85_RS12580 PF06691 Protein of unknown function (DUF1189) SD85_RS12590 PF04551 GcpE protein SD85_RS12605 PF01475 Ferric uptake regulator family SD85_RS12610 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SD85_RS12610 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SD85_RS12615 PF11116 Protein of unknown function (DUF2624) SD85_RS12620 PF01261 Xylose isomerase-like TIM barrel SD85_RS12625 PF00271 Helicase conserved C-terminal domain SD85_RS12625 PF00270 DEAD/DEAH box helicase SD85_RS12630 PF14181 YqfQ-like protein SD85_RS12635 PF02401 LytB protein SD85_RS12640 PF01784 NIF3 (NGG1p interacting factor 3) SD85_RS12645 PF04816 tRNA (adenine(22)-N(1))-methyltransferase SD85_RS12650 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SD85_RS12655 PF04545 Sigma-70, region 4 SD85_RS12655 PF00140 Sigma-70 factor, region 1.2 SD85_RS12655 PF04542 Sigma-70 region 2 SD85_RS12655 PF03979 Sigma-70 factor, region 1.1 SD85_RS12655 PF04539 Sigma-70 region 3 SD85_RS12660 PF01807 CHC2 zinc finger SD85_RS12660 PF08275 DNA primase catalytic core, N-terminal domain SD85_RS12660 PF10410 DnaB-helicase binding domain of primase SD85_RS12665 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 SD85_RS12670 PF03618 Kinase/pyrophosphorylase SD85_RS12675 PF08279 HTH domain SD85_RS12675 PF00571 CBS domain SD85_RS12680 PF02092 Glycyl-tRNA synthetase beta subunit SD85_RS12685 PF02091 Glycyl-tRNA synthetase alpha subunit SD85_RS12690 PF02565 Recombination protein O C terminal SD85_RS12690 PF11967 Recombination protein O N terminal SD85_RS12695 PF14006 YqzL-like protein SD85_RS12700 PF07650 KH domain SD85_RS12700 PF01926 50S ribosome-binding GTPase SD85_RS12705 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SD85_RS12710 PF01219 Prokaryotic diacylglycerol kinase SD85_RS12715 PF02130 Uncharacterized protein family UPF0054 SD85_RS12720 PF01966 HD domain SD85_RS12720 PF07697 7TM-HD extracellular SD85_RS12720 PF07698 7TM receptor with intracellular HD hydrolase SD85_RS12730 PF02562 PhoH-like protein SD85_RS12735 PF06898 Putative stage IV sporulation protein YqfD SD85_RS12740 PF07873 YabP family SD85_RS12750 PF12127 SigmaW regulon antibacterial SD85_RS12755 PF01972 Serine dehydrogenase proteinase SD85_RS12755 PF01957 NfeD-like C-terminal, partner-binding SD85_RS12760 PF09424 Yqey-like protein SD85_RS12765 PF01165 Ribosomal protein S21 SD85_RS12770 PF02690 Na+/Pi-cotransporter SD85_RS12775 PF00919 Uncharacterized protein family UPF0004 SD85_RS12775 PF01938 TRAM domain SD85_RS12775 PF04055 Radical SAM superfamily SD85_RS12780 PF04452 RNA methyltransferase SD85_RS12790 PF01556 DnaJ C terminal domain SD85_RS12790 PF00684 DnaJ central domain SD85_RS12790 PF00226 DnaJ domain SD85_RS12795 PF00012 Hsp70 protein SD85_RS12800 PF01025 GrpE SD85_RS12805 PF01628 HrcA protein C terminal domain SD85_RS12810 PF06969 HemN C-terminal domain SD85_RS12810 PF04055 Radical SAM superfamily SD85_RS12815 PF06421 GTP-binding protein LepA C-terminus SD85_RS12815 PF00009 Elongation factor Tu GTP binding domain SD85_RS12815 PF03144 Elongation factor Tu domain 2 SD85_RS12815 PF00679 Elongation factor G C-terminus SD85_RS12820 PF12438 Protein of unknown function (DUF3679) SD85_RS12825 PF07454 Stage II sporulation protein P (SpoIIP) SD85_RS12830 PF03418 Germination protease SD85_RS12835 PF01649 Ribosomal protein S20 SD85_RS12840 PF06144 DNA polymerase III, delta subunit SD85_RS12845 PF14141 YqzM-like protein SD85_RS12850 PF00753 Metallo-beta-lactamase superfamily SD85_RS12850 PF03772 Competence protein SD85_RS12850 PF13567 Domain of unknown function (DUF4131) SD85_RS12855 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SD85_RS12860 PF10531 SLBB domain SD85_RS12865 PF03807 NADP oxidoreductase coenzyme F420-dependent SD85_RS12865 PF14748 Pyrroline-5-carboxylate reductase dimerisation SD85_RS12870 PF13649 Methyltransferase domain SD85_RS12880 PF01966 HD domain SD85_RS12885 PF01467 Cytidylyltransferase-like SD85_RS12890 PF01985 CRS1 / YhbY (CRM) domain SD85_RS12895 PF01488 Shikimate / quinate 5-dehydrogenase SD85_RS12895 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SD85_RS12895 PF08501 Shikimate dehydrogenase substrate binding domain SD85_RS12900 PF01926 50S ribosome-binding GTPase SD85_RS12910 PF08970 Sporulation inhibitor A SD85_RS12920 PF00657 GDSL-like Lipase/Acylhydrolase SD85_RS12930 PF01510 N-acetylmuramoyl-L-alanine amidase SD85_RS12930 PF01471 Putative peptidoglycan binding domain SD85_RS12935 PF09335 SNARE associated Golgi protein SD85_RS12940 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SD85_RS12940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SD85_RS12950 PF14040 Deoxyribonuclease NucA/NucB SD85_RS12955 PF04542 Sigma-70 region 2 SD85_RS12955 PF04545 Sigma-70, region 4 SD85_RS12960 PF00239 Resolvase, N terminal domain SD85_RS12960 PF07508 Recombinase SD85_RS12960 PF13408 Recombinase zinc beta ribbon domain SD85_RS12965 PF00206 Lyase SD85_RS12965 PF10415 Fumarase C C-terminus SD85_RS12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_RS12970 PF03466 LysR substrate binding domain SD85_RS12990 PF03060 Nitronate monooxygenase SD85_RS12995 PF01047 MarR family SD85_RS13005 PF01638 HxlR-like helix-turn-helix SD85_RS13010 PF00881 Nitroreductase family SD85_RS13015 PF02311 AraC-like ligand binding domain SD85_RS13015 PF12833 Helix-turn-helix domain SD85_RS13025 PF00106 short chain dehydrogenase SD85_RS13030 PF00583 Acetyltransferase (GNAT) family SD85_RS13035 PF06445 GyrI-like small molecule binding domain SD85_RS13035 PF13411 MerR HTH family regulatory protein SD85_RS13040 PF07690 Major Facilitator Superfamily SD85_RS13045 PF01066 CDP-alcohol phosphatidyltransferase SD85_RS13055 PF00392 Bacterial regulatory proteins, gntR family SD85_RS13055 PF07729 FCD domain SD85_RS13060 PF00365 Phosphofructokinase SD85_RS13065 PF07690 Major Facilitator Superfamily SD85_RS13075 PF02779 Transketolase, pyrimidine binding domain SD85_RS13075 PF02780 Transketolase, C-terminal domain SD85_RS13075 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SD85_RS13080 PF00456 Transketolase, thiamine diphosphate binding domain SD85_RS13100 PF01235 Sodium:alanine symporter family SD85_RS13105 PF04237 YjbR SD85_RS13120 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SD85_RS13140 PF07875 Coat F domain SD85_RS13145 PF08240 Alcohol dehydrogenase GroES-like domain SD85_RS13145 PF13823 Alcohol dehydrogenase GroES-associated SD85_RS13145 PF00107 Zinc-binding dehydrogenase SD85_RS13155 PF07875 Coat F domain SD85_RS13160 PF00381 PTS HPr component phosphorylation site SD85_RS13165 PF00248 Aldo/keto reductase family SD85_RS13170 PF12833 Helix-turn-helix domain SD85_RS13170 PF06719 AraC-type transcriptional regulator N-terminus SD85_RS13175 PF13411 MerR HTH family regulatory protein SD85_RS13180 PF13411 MerR HTH family regulatory protein SD85_RS13185 PF03079 ARD/ARD' family SD85_RS13190 PF08240 Alcohol dehydrogenase GroES-like domain SD85_RS13190 PF00107 Zinc-binding dehydrogenase SD85_RS13195 PF01965 DJ-1/PfpI family SD85_RS13200 PF00251 Glycosyl hydrolases family 32 N-terminal domain SD85_RS13200 PF08244 Glycosyl hydrolases family 32 C terminal SD85_RS13205 PF03613 PTS system mannose/fructose/sorbose family IID component SD85_RS13210 PF03609 PTS system sorbose-specific iic component SD85_RS13215 PF03830 PTS system sorbose subfamily IIB component SD85_RS13220 PF03610 PTS system fructose IIA component SD85_RS13225 PF03610 PTS system fructose IIA component SD85_RS13225 PF00874 PRD domain SD85_RS13225 PF00158 Sigma-54 interaction domain SD85_RS13240 PF00324 Amino acid permease SD85_RS13245 PF01810 LysE type translocator SD85_RS13250 PF01978 Sugar-specific transcriptional regulator TrmB SD85_RS13250 PF11495 Archaeal transcriptional regulator TrmB SD85_RS13255 PF08281 Sigma-70, region 4 SD85_RS13255 PF04542 Sigma-70 region 2 SD85_RS13260 PF11738 Protein of unknown function (DUF3298) SD85_RS13260 PF13739 Deacetylase PdaC SD85_RS13265 PF01757 Acyltransferase family SD85_RS13270 PF14145 YrhK-like protein SD85_RS13275 PF00667 FAD binding domain SD85_RS13275 PF00258 Flavodoxin SD85_RS13275 PF00175 Oxidoreductase NAD-binding domain SD85_RS13275 PF00067 Cytochrome P450 SD85_RS13280 PF00440 Bacterial regulatory proteins, tetR family SD85_RS13280 PF16295 Tetracyclin repressor-like, C-terminal domain SD85_RS13285 PF08241 Methyltransferase domain SD85_RS13300 PF09501 Probable sporulation protein (Bac_small_yrzI) SD85_RS13305 PF01226 Formate/nitrite transporter SD85_RS13310 PF10057 Uncharacterized conserved protein (DUF2294) SD85_RS13315 PF01568 Molydopterin dinucleotide binding domain SD85_RS13315 PF00384 Molybdopterin oxidoreductase SD85_RS13315 PF00037 4Fe-4S binding domain SD85_RS13315 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SD85_RS13315 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SD85_RS13320 PF07849 Protein of unknown function (DUF1641) SD85_RS13325 PF14143 YrhC-like protein SD85_RS13330 PF01053 Cys/Met metabolism PLP-dependent enzyme SD85_RS13335 PF00291 Pyridoxal-phosphate dependent enzyme SD85_RS13340 PF01048 Phosphorylase superfamily SD85_RS13345 PF13649 Methyltransferase domain SD85_RS13350 PF10750 Protein of unknown function (DUF2536) SD85_RS13355 PF07423 Domain of unknown function (DUF1510) SD85_RS13360 PF03717 Penicillin-binding Protein dimerisation domain SD85_RS13360 PF00905 Penicillin binding protein transpeptidase domain SD85_RS13365 PF03449 Transcription elongation factor, N-terminal SD85_RS13365 PF01272 Transcription elongation factor, GreA/GreB, C-term SD85_RS13370 PF00485 Phosphoribulokinase / Uridine kinase family SD85_RS13375 PF01136 Peptidase family U32 SD85_RS13375 PF16325 Peptidase family U32 C-terminal domain SD85_RS13380 PF01136 Peptidase family U32 SD85_RS13385 PF01596 O-methyltransferase SD85_RS13390 PF02618 YceG-like family SD85_RS13395 PF06949 Protein of unknown function (DUF1292) SD85_RS13400 PF03652 Holliday junction resolvase SD85_RS13405 PF06135 IreB regulatory phosphoprotein SD85_RS13410 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SD85_RS13410 PF01411 tRNA synthetases class II (A) SD85_RS13410 PF02272 DHHA1 domain SD85_RS13415 PF01594 AI-2E family transporter SD85_RS13420 PF13056 Protein of unknown function (DUF3918) SD85_RS13430 PF05239 PRC-barrel domain SD85_RS13435 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SD85_RS13435 PF14490 Helix-hairpin-helix containing domain SD85_RS13435 PF13538 UvrD-like helicase C-terminal domain SD85_RS13440 PF13181 Tetratricopeptide repeat SD85_RS13440 PF07719 Tetratricopeptide repeat SD85_RS13450 PF00266 Aminotransferase class-V SD85_RS13455 PF02082 Transcriptional regulator SD85_RS13460 PF12002 MgsA AAA+ ATPase C terminal SD85_RS13460 PF16193 AAA C-terminal domain SD85_RS13460 PF05496 Holliday junction DNA helicase RuvB P-loop domain SD85_RS13475 PF00899 ThiF family SD85_RS13485 PF02938 GAD domain SD85_RS13485 PF01336 OB-fold nucleic acid binding domain SD85_RS13485 PF00152 tRNA synthetases class II (D, K and N) SD85_RS13490 PF03129 Anticodon binding domain SD85_RS13490 PF13393 Histidyl-tRNA synthetase SD85_RS13500 PF17449 Uncharacterized YrzK-like SD85_RS13505 PF01520 N-acetylmuramoyl-L-alanine amidase SD85_RS13505 PF08239 Bacterial SH3 domain SD85_RS13510 PF02580 D-Tyr-tRNA(Tyr) deacylase SD85_RS13515 PF04607 Region found in RelA / SpoT proteins SD85_RS13515 PF02824 TGS domain SD85_RS13515 PF13291 ACT domain SD85_RS13520 PF00156 Phosphoribosyl transferase domain SD85_RS13525 PF01368 DHH family SD85_RS13525 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SD85_RS13525 PF02272 DHHA1 domain SD85_RS13525 PF17768 RecJ OB domain SD85_RS13530 PF06305 Lipopolysaccharide assembly protein A domain SD85_RS13535 PF02080 TrkA-C domain SD85_RS13540 PF02355 Protein export membrane protein SD85_RS13540 PF07549 SecD/SecF GG Motif SD85_RS13545 PF13797 Post-transcriptional regulator SD85_RS13550 PF01943 Polysaccharide biosynthesis protein SD85_RS13550 PF14667 Polysaccharide biosynthesis C-terminal domain SD85_RS13555 PF04239 Protein of unknown function (DUF421) SD85_RS13560 PF12670 Protein of unknown function (DUF3792) SD85_RS13565 PF02699 Preprotein translocase subunit SD85_RS13570 PF01702 Queuine tRNA-ribosyltransferase SD85_RS13575 PF02547 Queuosine biosynthesis protein SD85_RS13580 PF11146 Protein of unknown function (DUF2905) SD85_RS13585 PF05496 Holliday junction DNA helicase RuvB P-loop domain SD85_RS13585 PF05491 RuvB C-terminal winged helix domain SD85_RS13585 PF17864 RuvB AAA lid domain SD85_RS13590 PF01330 RuvA N terminal domain SD85_RS13590 PF07499 RuvA, C-terminal domain SD85_RS13595 PF08955 BofC C-terminal domain SD85_RS13595 PF08977 Bypass of Forespore C, N terminal SD85_RS13600 PF07690 Major Facilitator Superfamily SD85_RS13605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SD85_RS13605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SD85_RS13620 PF01235 Sodium:alanine symporter family SD85_RS13625 PF01709 Transcriptional regulator SD85_RS13630 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) SD85_RS13635 PF01476 LysM domain SD85_RS13640 PF02445 Quinolinate synthetase A protein SD85_RS13645 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SD85_RS13645 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SD85_RS13650 PF02910 Fumarate reductase flavoprotein C-term SD85_RS13650 PF00890 FAD binding domain SD85_RS13655 PF00266 Aminotransferase class-V SD85_RS13660 PF02829 3H domain SD85_RS13660 PF08279 HTH domain SD85_RS13665 PF00800 Prephenate dehydratase SD85_RS13665 PF01842 ACT domain SD85_RS13670 PF01842 ACT domain SD85_RS13675 PF01926 50S ribosome-binding GTPase SD85_RS13675 PF01018 GTP1/OBG SD85_RS13675 PF09269 Domain of unknown function (DUF1967) SD85_RS13680 PF14682 Sporulation initiation phospho-transferase B, C-terminal SD85_RS13680 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SD85_RS13690 PF01016 Ribosomal L27 protein SD85_RS13695 PF04327 Cysteine protease Prp SD85_RS13700 PF00829 Ribosomal prokaryotic L21 protein SD85_RS13705 PF02163 Peptidase family M50 SD85_RS13710 PF01551 Peptidase family M23 SD85_RS13715 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SD85_RS13720 PF03775 Septum formation inhibitor MinC, C-terminal domain SD85_RS13725 PF04093 rod shape-determining protein MreD SD85_RS13730 PF04085 rod shape-determining protein MreC SD85_RS13740 PF04002 RadC-like JAB domain SD85_RS13740 PF00633 Helix-hairpin-helix motif SD85_RS13745 PF02545 Maf-like protein SD85_RS13750 PF05036 Sporulation related domain SD85_RS13755 PF01478 Type IV leader peptidase family SD85_RS13755 PF06750 Bacterial Peptidase A24 N-terminal domain SD85_RS13760 PF08245 Mur ligase middle domain SD85_RS13760 PF02875 Mur ligase family, glutamate ligase domain SD85_RS13765 PF10458 Valyl tRNA synthetase tRNA binding arm SD85_RS13765 PF00133 tRNA synthetases class I (I, L, M and V) SD85_RS13765 PF08264 Anticodon-binding domain of tRNA SD85_RS13780 PF01476 LysM domain SD85_RS13785 PF00202 Aminotransferase class-III SD85_RS13790 PF00490 Delta-aminolevulinic acid dehydratase SD85_RS13795 PF02602 Uroporphyrinogen-III synthase HemD SD85_RS13800 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SD85_RS13800 PF03900 Porphobilinogen deaminase, C-terminal domain SD85_RS13805 PF01578 Cytochrome C assembly protein SD85_RS13810 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SD85_RS13810 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SD85_RS13810 PF01488 Shikimate / quinate 5-dehydrogenase SD85_RS13820 PF01926 50S ribosome-binding GTPase SD85_RS13825 PF02190 ATP-dependent protease La (LON) substrate-binding domain SD85_RS13825 PF05362 Lon protease (S16) C-terminal proteolytic domain SD85_RS13825 PF00004 ATPase family associated with various cellular activities (AAA) SD85_RS13830 PF05362 Lon protease (S16) C-terminal proteolytic domain SD85_RS13830 PF00004 ATPase family associated with various cellular activities (AAA) SD85_RS13835 PF10431 C-terminal, D2-small domain, of ClpB protein SD85_RS13835 PF06689 ClpX C4-type zinc finger SD85_RS13835 PF07724 AAA domain (Cdc48 subfamily) SD85_RS13840 PF05698 Bacterial trigger factor protein (TF) C-terminus SD85_RS13840 PF05697 Bacterial trigger factor protein (TF) SD85_RS13840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SD85_RS13850 PF00694 Aconitase C-terminal domain SD85_RS13855 PF00330 Aconitase family (aconitate hydratase) SD85_RS13860 PF00180 Isocitrate/isopropylmalate dehydrogenase SD85_RS13865 PF08502 LeuA allosteric (dimerisation) domain SD85_RS13865 PF00682 HMGL-like SD85_RS13870 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SD85_RS13870 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SD85_RS13875 PF01842 ACT domain SD85_RS13875 PF10369 Small subunit of acetolactate synthase SD85_RS13880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SD85_RS13880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SD85_RS13880 PF00205 Thiamine pyrophosphate enzyme, central domain SD85_RS13890 PF00583 Acetyltransferase (GNAT) family SD85_RS13900 PF11181 Heat induced stress protein YflT SD85_RS13900 PF09557 Domain of unknown function (DUF2382) SD85_RS13910 PF12850 Calcineurin-like phosphoesterase superfamily domain SD85_RS13915 PF01725 Ham1 family SD85_RS13920 PF01138 3' exoribonuclease family, domain 1 SD85_RS13920 PF03725 3' exoribonuclease family, domain 2 SD85_RS13925 PF10646 Sporulation and spore germination SD85_RS13930 PF01177 Asp/Glu/Hydantoin racemase SD85_RS13935 PF01047 MarR family SD85_RS13940 PF00196 Bacterial regulatory proteins, luxR family SD85_RS13945 PF03061 Thioesterase superfamily SD85_RS13950 PF13085 2Fe-2S iron-sulfur cluster binding domain SD85_RS13950 PF13183 4Fe-4S dicluster domain SD85_RS13955 PF00890 FAD binding domain SD85_RS13955 PF02910 Fumarate reductase flavoprotein C-term SD85_RS13960 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SD85_RS13970 PF10702 Protein of unknown function (DUF2507) SD85_RS13975 PF13840 ACT domain SD85_RS13975 PF00696 Amino acid kinase family SD85_RS13975 PF01842 ACT domain SD85_RS13980 PF08459 UvrC Helix-hairpin-helix N-terminal SD85_RS13980 PF02151 UvrB/uvrC motif SD85_RS13980 PF01541 GIY-YIG catalytic domain SD85_RS13985 PF00085 Thioredoxin SD85_RS13990 PF06964 Alpha-L-arabinofuranosidase C-terminal domain SD85_RS13995 PF00766 Electron transfer flavoprotein FAD-binding domain SD85_RS13995 PF01012 Electron transfer flavoprotein domain SD85_RS14000 PF01012 Electron transfer flavoprotein domain SD85_RS14005 PF00378 Enoyl-CoA hydratase/isomerase SD85_RS14010 PF08359 YsiA-like protein, C-terminal region SD85_RS14010 PF00440 Bacterial regulatory proteins, tetR family SD85_RS14015 PF00501 AMP-binding enzyme SD85_RS14015 PF13193 AMP-binding enzyme C-terminal domain SD85_RS14020 PF03994 Domain of Unknown Function (DUF350) SD85_RS14025 PF01713 Smr domain SD85_RS14025 PF00488 MutS domain V SD85_RS14030 PF02811 PHP domain SD85_RS14030 PF14716 Helix-hairpin-helix domain SD85_RS14030 PF14791 DNA polymerase beta thumb SD85_RS14035 PF02674 Colicin V production protein SD85_RS14040 PF05164 Cell division protein ZapA SD85_RS14045 PF01351 Ribonuclease HII SD85_RS14045 PF11858 Domain of unknown function (DUF3378) SD85_RS14050 PF03147 Ferredoxin-fold anticodon binding domain SD85_RS14050 PF03484 tRNA synthetase B5 domain SD85_RS14050 PF03483 B3/4 domain SD85_RS14050 PF01588 Putative tRNA binding domain SD85_RS14050 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SD85_RS14055 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SD85_RS14055 PF01409 tRNA synthetases class II core domain (F) SD85_RS14060 PF00588 SpoU rRNA Methylase family SD85_RS14060 PF08032 RNA 2'-O ribose methyltransferase substrate binding SD85_RS14065 PF14098 Small, acid-soluble spore protein I SD85_RS14070 PF03009 Glycerophosphoryl diester phosphodiesterase family SD85_RS14075 PF01565 FAD binding domain SD85_RS14075 PF02913 FAD linked oxidases, C-terminal domain SD85_RS14080 PF02754 Cysteine-rich domain SD85_RS14080 PF13183 4Fe-4S dicluster domain SD85_RS14085 PF12681 Glyoxalase-like domain SD85_RS14090 PF02554 Carbon starvation protein CstA SD85_RS14090 PF13722 5TM C-terminal transporter carbon starvation CstA SD85_RS14105 PF03551 Transcriptional regulator PadR-like family SD85_RS14110 PF06964 Alpha-L-arabinofuranosidase C-terminal domain SD85_RS14115 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS14120 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS14125 PF01547 Bacterial extracellular solute-binding protein SD85_RS14130 PF13685 Iron-containing alcohol dehydrogenase SD85_RS14135 PF13344 Haloacid dehalogenase-like hydrolase SD85_RS14140 PF00596 Class II Aldolase and Adducin N-terminal domain SD85_RS14145 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SD85_RS14145 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SD85_RS14150 PF11762 L-arabinose isomerase C-terminal domain SD85_RS14150 PF02610 L-arabinose isomerase SD85_RS14155 PF04616 Glycosyl hydrolases family 43 SD85_RS14160 PF05343 M42 glutamyl aminopeptidase SD85_RS14170 PF06961 Protein of unknown function (DUF1294) SD85_RS14175 PF00453 Ribosomal protein L20 SD85_RS14180 PF01632 Ribosomal protein L35 SD85_RS14185 PF05198 Translation initiation factor IF-3, N-terminal domain SD85_RS14185 PF00707 Translation initiation factor IF-3, C-terminal domain SD85_RS14200 PF04172 LrgB-like family SD85_RS14205 PF03788 LrgA family SD85_RS14210 PF04397 LytTr DNA-binding domain SD85_RS14210 PF00072 Response regulator receiver domain SD85_RS14215 PF07694 5TMR of 5TMR-LYT SD85_RS14215 PF06580 Histidine kinase SD85_RS14215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS14220 PF13419 Haloacid dehalogenase-like hydrolase SD85_RS14225 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SD85_RS14225 PF03129 Anticodon binding domain SD85_RS14225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SD85_RS14225 PF02824 TGS domain SD85_RS14230 PF08812 YtxC-like family SD85_RS14235 PF09335 SNARE associated Golgi protein SD85_RS14240 PF07319 Primosomal protein DnaI N-terminus SD85_RS14240 PF01695 IstB-like ATP binding protein SD85_RS14245 PF07261 Replication initiation and membrane attachment SD85_RS14250 PF03477 ATP cone domain SD85_RS14255 PF02675 S-adenosylmethionine decarboxylase SD85_RS14260 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SD85_RS14260 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SD85_RS14265 PF01638 HxlR-like helix-turn-helix SD85_RS14270 PF07690 Major Facilitator Superfamily SD85_RS14275 PF00248 Aldo/keto reductase family SD85_RS14280 PF01121 Dephospho-CoA kinase SD85_RS14295 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SD85_RS14295 PF06827 Zinc finger found in FPG and IleRS SD85_RS14295 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SD85_RS14300 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SD85_RS14300 PF01367 5'-3' exonuclease, C-terminal SAM fold SD85_RS14300 PF00476 DNA polymerase family A SD85_RS14305 PF00989 PAS fold SD85_RS14305 PF16736 Single Cache-like SD85_RS14305 PF00512 His Kinase A (phospho-acceptor) domain SD85_RS14305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS14310 PF00486 Transcriptional regulatory protein, C terminal SD85_RS14310 PF00072 Response regulator receiver domain SD85_RS14315 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SD85_RS14315 PF00056 lactate/malate dehydrogenase, NAD binding domain SD85_RS14320 PF00180 Isocitrate/isopropylmalate dehydrogenase SD85_RS14325 PF00285 Citrate synthase, C-terminal domain SD85_RS14330 PF04284 Protein of unknown function (DUF441) SD85_RS14335 PF01594 AI-2E family transporter SD85_RS14340 PF04186 FxsA cytoplasmic membrane protein SD85_RS14345 PF02887 Pyruvate kinase, alpha/beta domain SD85_RS14345 PF00391 PEP-utilising enzyme, mobile domain SD85_RS14345 PF00224 Pyruvate kinase, barrel domain SD85_RS14350 PF00365 Phosphofructokinase SD85_RS14355 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SD85_RS14360 PF17848 Acetyl-coA carboxylase zinc finger domain SD85_RS14360 PF01039 Carboxyl transferase domain SD85_RS14365 PF03949 Malic enzyme, NAD binding domain SD85_RS14365 PF00390 Malic enzyme, N-terminal domain SD85_RS14370 PF07733 Bacterial DNA polymerase III alpha NTPase domain SD85_RS14370 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SD85_RS14370 PF14579 Helix-hairpin-helix motif SD85_RS14370 PF01336 OB-fold nucleic acid binding domain SD85_RS14370 PF02811 PHP domain SD85_RS14375 PF14034 Sporulation protein YtrH SD85_RS14390 PF02272 DHHA1 domain SD85_RS14390 PF01368 DHH family SD85_RS14395 PF14007 YtpI-like protein SD85_RS14400 PF00392 Bacterial regulatory proteins, gntR family SD85_RS14400 PF03061 Thioesterase superfamily SD85_RS14400 PF07085 DRTGG domain SD85_RS14400 PF00571 CBS domain SD85_RS14420 PF14698 Argininosuccinate lyase C-terminal SD85_RS14420 PF00206 Lyase SD85_RS14425 PF00764 Arginosuccinate synthase SD85_RS14430 PF00994 Probable molybdopterin binding domain SD85_RS14435 PF00871 Acetokinase family SD85_RS14440 PF02384 N-6 DNA Methylase SD85_RS14445 PF08534 Redoxin SD85_RS14450 PF09579 Sporulation protein YtfJ (Spore_YtfJ) SD85_RS14455 PF11167 Protein of unknown function (DUF2953) SD85_RS14460 PF06271 RDD family SD85_RS14465 PF01343 Peptidase family S49 SD85_RS14470 PF01513 ATP-NAD kinase SD85_RS14475 PF07969 Amidohydrolase family SD85_RS14480 PF00501 AMP-binding enzyme SD85_RS14480 PF13193 AMP-binding enzyme C-terminal domain SD85_RS14485 PF00269 Small, acid-soluble spore proteins, alpha/beta type SD85_RS14490 PF02568 Thiamine biosynthesis protein (ThiI) SD85_RS14490 PF02926 THUMP domain SD85_RS14495 PF00266 Aminotransferase class-V SD85_RS14500 PF05525 Branched-chain amino acid transport protein SD85_RS14505 PF06160 Septation ring formation regulator, EzrA SD85_RS14510 PF02811 PHP domain SD85_RS14515 PF00440 Bacterial regulatory proteins, tetR family SD85_RS14520 PF13185 GAF domain SD85_RS14525 PF00990 Diguanylate cyclase, GGDEF domain SD85_RS14530 PF00163 Ribosomal protein S4/S9 N-terminal domain SD85_RS14530 PF01479 S4 domain SD85_RS14540 PF00579 tRNA synthetases class I (W and Y) SD85_RS14540 PF01479 S4 domain SD85_RS14545 PF00501 AMP-binding enzyme SD85_RS14545 PF13193 AMP-binding enzyme C-terminal domain SD85_RS14550 PF00583 Acetyltransferase (GNAT) family SD85_RS14555 PF00571 CBS domain SD85_RS14560 PF00850 Histone deacetylase domain SD85_RS14565 PF13677 Membrane MotB of proton-channel complex MotA/MotB SD85_RS14565 PF00691 OmpA family SD85_RS14570 PF01618 MotA/TolQ/ExbB proton channel family SD85_RS14575 PF00356 Bacterial regulatory proteins, lacI family SD85_RS14580 PF01817 Chorismate mutase type II SD85_RS14580 PF00793 DAHP synthetase I family SD85_RS14585 PF11009 Protein of unknown function (DUF2847) SD85_RS14590 PF12732 YtxH-like protein SD85_RS14595 PF06103 Bacterial protein of unknown function (DUF948) SD85_RS14600 PF08245 Mur ligase middle domain SD85_RS14600 PF02875 Mur ligase family, glutamate ligase domain SD85_RS14600 PF01225 Mur ligase family, catalytic domain SD85_RS14605 PF01580 FtsK/SpoIIIE family SD85_RS14605 PF09397 Ftsk gamma domain SD85_RS14605 PF17854 FtsK alpha domain SD85_RS14610 PF14794 Domain of unknown function (DUF4479) SD85_RS14610 PF01588 Putative tRNA binding domain SD85_RS14615 PF07285 Protein of unknown function (DUF1444) SD85_RS14620 PF00085 Thioredoxin SD85_RS14625 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ SD85_RS14630 PF05343 M42 glutamyl aminopeptidase SD85_RS14635 PF03413 Peptidase propeptide and YPEB domain SD85_RS14640 PF00390 Malic enzyme, N-terminal domain SD85_RS14640 PF03949 Malic enzyme, NAD binding domain SD85_RS14645 PF00753 Metallo-beta-lactamase superfamily SD85_RS14650 PF02390 Putative methyltransferase SD85_RS14655 PF14165 YtzH-like protein SD85_RS14660 PF01636 Phosphotransferase enzyme family SD85_RS14665 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SD85_RS14665 PF17999 Pullulanase N1-terminal domain SD85_RS14665 PF00128 Alpha amylase, catalytic domain SD85_RS14670 PF00781 Diacylglycerol kinase catalytic domain SD85_RS14685 PF00291 Pyridoxal-phosphate dependent enzyme SD85_RS14690 PF01546 Peptidase family M20/M25/M40 SD85_RS14695 PF00860 Permease family SD85_RS14700 PF05975 Bacterial ABC transporter protein EcsB SD85_RS14705 PF00005 ABC transporter SD85_RS14710 PF08220 DeoR-like helix-turn-helix domain SD85_RS14715 PF01479 S4 domain SD85_RS14715 PF00849 RNA pseudouridylate synthase SD85_RS14720 PF14667 Polysaccharide biosynthesis C-terminal domain SD85_RS14720 PF01943 Polysaccharide biosynthesis protein SD85_RS14730 PF02028 BCCT, betaine/carnitine/choline family transporter SD85_RS14735 PF10957 Sporulation protein Cse60 SD85_RS14740 PF04854 Protein of unknown function, DUF624 SD85_RS14745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SD85_RS14745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SD85_RS14755 PF07470 Glycosyl Hydrolase Family 88 SD85_RS14760 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS14765 PF17853 GGDEF-like domain SD85_RS14765 PF12833 Helix-turn-helix domain SD85_RS14770 PF13416 Bacterial extracellular solute-binding protein SD85_RS14775 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS14780 PF01370 NAD dependent epimerase/dehydratase family SD85_RS14785 PF00067 Cytochrome P450 SD85_RS14790 PF04055 Radical SAM superfamily SD85_RS14790 PF06968 Biotin and Thiamin Synthesis associated domain SD85_RS14800 PF00155 Aminotransferase class I and II SD85_RS14805 PF00202 Aminotransferase class-III SD85_RS14810 PF03744 6-carboxyhexanoate--CoA ligase SD85_RS14820 PF01738 Dienelactone hydrolase family SD85_RS14825 PF00356 Bacterial regulatory proteins, lacI family SD85_RS14830 PF01547 Bacterial extracellular solute-binding protein SD85_RS14835 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS14840 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS14845 PF11975 Family 4 glycosyl hydrolase C-terminal domain SD85_RS14845 PF02056 Family 4 glycosyl hydrolase SD85_RS14850 PF00581 Rhodanese-like domain SD85_RS14855 PF08264 Anticodon-binding domain of tRNA SD85_RS14855 PF09334 tRNA synthetases class I (M) SD85_RS14855 PF00133 tRNA synthetases class I (I, L, M and V) SD85_RS14855 PF13603 Leucyl-tRNA synthetase, Domain 2 SD85_RS14860 PF14074 Protein of unknown function (DUF4257) SD85_RS14865 PF01740 STAS domain SD85_RS14865 PF13426 PAS domain SD85_RS14870 PF07690 Major Facilitator Superfamily SD85_RS14875 PF04791 LMBR1-like membrane protein SD85_RS14880 PF02687 FtsX-like permease family SD85_RS14885 PF00005 ABC transporter SD85_RS14890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS14895 PF00486 Transcriptional regulatory protein, C terminal SD85_RS14895 PF00072 Response regulator receiver domain SD85_RS14900 PF02687 FtsX-like permease family SD85_RS14900 PF12704 MacB-like periplasmic core domain SD85_RS14905 PF00005 ABC transporter SD85_RS14920 PF00005 ABC transporter SD85_RS14925 PF00392 Bacterial regulatory proteins, gntR family SD85_RS14935 PF10732 Protein of unknown function (DUF2524) SD85_RS14940 PF04055 Radical SAM superfamily SD85_RS14940 PF16199 Radical_SAM C-terminal domain SD85_RS14945 PF06962 Putative rRNA methylase SD85_RS14950 PF10776 Protein of unknown function (DUF2600) SD85_RS14955 PF12146 Serine aminopeptidase, S33 SD85_RS14960 PF00132 Bacterial transferase hexapeptide (six repeats) SD85_RS14965 PF00324 Amino acid permease SD85_RS14970 PF13537 Glutamine amidotransferase domain SD85_RS14970 PF00733 Asparagine synthase SD85_RS14975 PF00438 S-adenosylmethionine synthetase, N-terminal domain SD85_RS14975 PF02772 S-adenosylmethionine synthetase, central domain SD85_RS14975 PF02773 S-adenosylmethionine synthetase, C-terminal domain SD85_RS14980 PF01293 Phosphoenolpyruvate carboxykinase SD85_RS14985 PF10763 Protein of unknown function (DUF2584) SD85_RS14990 PF00326 Prolyl oligopeptidase family SD85_RS15000 PF00005 ABC transporter SD85_RS15005 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS15010 PF13276 HTH-like domain SD85_RS15010 PF13333 Integrase core domain SD85_RS15010 PF00665 Integrase core domain SD85_RS15020 PF00293 NUDIX domain SD85_RS15025 PF05105 Bacteriophage holin family SD85_RS15030 PF00210 Ferritin-like domain SD85_RS15040 PF13115 YtkA-like SD85_RS15045 PF02664 S-Ribosylhomocysteinase (LuxS) SD85_RS15050 PF01809 Putative membrane protein insertion efficiency factor SD85_RS15055 PF00484 Carbonic anhydrase SD85_RS15060 PF01197 Ribosomal protein L31 SD85_RS15065 PF01654 Cytochrome bd terminal oxidase subunit I SD85_RS15070 PF02322 Cytochrome bd terminal oxidase subunit II SD85_RS15075 PF07561 Domain of Unknown Function (DUF1540) SD85_RS15080 PF00950 ABC 3 transport family SD85_RS15085 PF00950 ABC 3 transport family SD85_RS15090 PF00005 ABC transporter SD85_RS15095 PF01297 Zinc-uptake complex component A periplasmic SD85_RS15100 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SD85_RS15100 PF13378 Enolase C-terminal domain-like SD85_RS15105 PF00501 AMP-binding enzyme SD85_RS15105 PF13193 AMP-binding enzyme C-terminal domain SD85_RS15110 PF00378 Enoyl-CoA hydratase/isomerase SD85_RS15115 PF00561 alpha/beta hydrolase fold SD85_RS15120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SD85_RS15120 PF16582 Middle domain of thiamine pyrophosphate SD85_RS15120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SD85_RS15125 PF00425 chorismate binding enzyme SD85_RS15130 PF01258 Prokaryotic dksA/traR C4-type zinc finger SD85_RS15135 PF00483 Nucleotidyl transferase SD85_RS15140 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SD85_RS15140 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SD85_RS15140 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SD85_RS15145 PF01370 NAD dependent epimerase/dehydratase family SD85_RS15150 PF13439 Glycosyltransferase Family 4 SD85_RS15150 PF00534 Glycosyl transferases group 1 SD85_RS15165 PF13439 Glycosyltransferase Family 4 SD85_RS15165 PF00534 Glycosyl transferases group 1 SD85_RS15170 PF01636 Phosphotransferase enzyme family SD85_RS15175 PF03073 TspO/MBR family SD85_RS15180 PF00343 Carbohydrate phosphorylase SD85_RS15185 PF08323 Starch synthase catalytic domain SD85_RS15185 PF00534 Glycosyl transferases group 1 SD85_RS15190 PF00483 Nucleotidyl transferase SD85_RS15195 PF00483 Nucleotidyl transferase SD85_RS15200 PF00128 Alpha amylase, catalytic domain SD85_RS15200 PF02806 Alpha amylase, C-terminal all-beta domain SD85_RS15200 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SD85_RS15330 PF09515 Thiamine transporter protein (Thia_YuaJ) SD85_RS15335 PF00583 Acetyltransferase (GNAT) family SD85_RS15340 PF01145 SPFH domain / Band 7 family SD85_RS15340 PF15975 Flotillin SD85_RS15350 PF12867 DinB superfamily SD85_RS15360 PF00465 Iron-containing alcohol dehydrogenase SD85_RS15365 PF00171 Aldehyde dehydrogenase family SD85_RS15375 PF17735 Biofilm surface layer A SD85_RS15380 PF02254 TrkA-N domain SD85_RS15380 PF02080 TrkA-C domain SD85_RS15385 PF02386 Cation transport protein SD85_RS15390 PF05360 yiaA/B two helix domain SD85_RS15395 PF13457 GW (Gly-Tryp) dipeptide domain SD85_RS15395 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SD85_RS15400 PF07690 Major Facilitator Superfamily SD85_RS15405 PF05995 Cysteine dioxygenase type I SD85_RS15415 PF02673 Bacitracin resistance protein BacA SD85_RS15420 PF01594 AI-2E family transporter SD85_RS15425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SD85_RS15425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SD85_RS15430 PF06134 L-rhamnose isomerase (RhaA) SD85_RS15435 PF05336 L-rhamnose mutarotase SD85_RS15440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SD85_RS15440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SD85_RS15445 PF00455 DeoR C terminal sensor domain SD85_RS15445 PF08220 DeoR-like helix-turn-helix domain SD85_RS15450 PF00596 Class II Aldolase and Adducin N-terminal domain SD85_RS15455 PF00672 HAMP domain SD85_RS15455 PF02743 Cache domain SD85_RS15455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SD85_RS15460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SD85_RS15460 PF02743 Cache domain SD85_RS15460 PF00672 HAMP domain SD85_RS15465 PF02743 Cache domain SD85_RS15465 PF00672 HAMP domain SD85_RS15465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SD85_RS15470 PF02743 Cache domain SD85_RS15470 PF00672 HAMP domain SD85_RS15470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SD85_RS15485 PF03060 Nitronate monooxygenase SD85_RS15490 PF01894 Uncharacterised protein family UPF0047 SD85_RS15495 PF16657 Maltogenic Amylase, C-terminal domain SD85_RS15495 PF00128 Alpha amylase, catalytic domain SD85_RS15505 PF13333 Integrase core domain SD85_RS15505 PF13276 HTH-like domain SD85_RS15505 PF00665 Integrase core domain SD85_RS15510 PF00571 CBS domain SD85_RS15510 PF03471 Transporter associated domain SD85_RS15510 PF01595 Cyclin M transmembrane N-terminal domain SD85_RS15515 PF04298 Putative neutral zinc metallopeptidase SD85_RS15525 PF11458 Membrane-integrating protein Mistic SD85_RS15530 PF07885 Ion channel SD85_RS15530 PF02254 TrkA-N domain SD85_RS15535 PF08868 YugN-like family SD85_RS15545 PF00342 Phosphoglucose isomerase SD85_RS15550 PF00465 Iron-containing alcohol dehydrogenase SD85_RS15555 PF00465 Iron-containing alcohol dehydrogenase SD85_RS15560 PF04070 Domain of unknown function (DUF378) SD85_RS15565 PF00575 S1 RNA binding domain SD85_RS15570 PF00155 Aminotransferase class I and II SD85_RS15575 PF01037 Lrp/AsnC ligand binding domain SD85_RS15580 PF00561 alpha/beta hydrolase fold SD85_RS15580 PF08386 TAP-like protein SD85_RS15585 PF08958 Domain of unknown function (DUF1871) SD85_RS15590 PF00155 Aminotransferase class I and II SD85_RS15595 PF00512 His Kinase A (phospho-acceptor) domain SD85_RS15595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS15600 PF08810 Kinase associated protein B SD85_RS15605 PF00929 Exonuclease SD85_RS15615 PF07690 Major Facilitator Superfamily SD85_RS15620 PF00912 Transglycosylase SD85_RS15620 PF00905 Penicillin binding protein transpeptidase domain SD85_RS15625 PF04134 Protein of unknown function, DUF393 SD85_RS15630 PF17328 Family of unknown function (DUF5366) SD85_RS15635 PF00989 PAS fold SD85_RS15635 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SD85_RS15635 PF17203 Single cache domain 3 SD85_RS15635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS15640 PF00072 Response regulator receiver domain SD85_RS15645 PF03390 2-hydroxycarboxylate transporter family SD85_RS15655 PF00361 Proton-conducting membrane transporter SD85_RS15655 PF13244 Domain of unknown function (DUF4040) SD85_RS15655 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SD85_RS15660 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter SD85_RS15665 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SD85_RS15670 PF00361 Proton-conducting membrane transporter SD85_RS15675 PF01899 Na+/H+ ion antiporter subunit SD85_RS15680 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) SD85_RS15685 PF03334 Na+/H+ antiporter subunit SD85_RS15690 PF03061 Thioesterase superfamily SD85_RS15695 PF00196 Bacterial regulatory proteins, luxR family SD85_RS15695 PF00072 Response regulator receiver domain SD85_RS15700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS15700 PF07730 Histidine kinase SD85_RS15710 PF00348 Polyprenyl synthetase SD85_RS15715 PF08181 DegQ (SacQ) family SD85_RS15725 PF08668 HDOD domain SD85_RS15725 PF00563 EAL domain SD85_RS15730 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SD85_RS15730 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SD85_RS15730 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SD85_RS15735 PF00857 Isochorismatase family SD85_RS15740 PF07997 Protein of unknown function (DUF1694) SD85_RS15745 PF14166 YueH-like protein SD85_RS15750 PF10676 Spore germination protein gerPA/gerPF SD85_RS15755 PF01594 AI-2E family transporter SD85_RS15760 PF10049 Protein of unknown function (DUF2283) SD85_RS15765 PF10842 Protein of unknown function (DUF2642) SD85_RS15770 PF01966 HD domain SD85_RS15775 PF00106 short chain dehydrogenase SD85_RS15780 PF17355 Family of unknown function (DUF5383) SD85_RS15790 PF12538 DNA transporter SD85_RS15790 PF01580 FtsK/SpoIIIE family SD85_RS15795 PF10140 WXG100 protein secretion system (Wss), protein YukC SD85_RS15800 PF08817 WXG100 protein secretion system (Wss), protein YukD SD85_RS15805 PF06013 Proteins of 100 residues with WXG SD85_RS15810 PF13556 PucR C-terminal helix-turn-helix domain SD85_RS15810 PF17853 GGDEF-like domain SD85_RS15810 PF06018 CodY GAF-like domain SD85_RS15815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SD85_RS15815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SD85_RS15820 PF10042 Uncharacterized conserved protein (DUF2278) SD85_RS15825 PF03621 MbtH-like protein SD85_RS15830 PF13193 AMP-binding enzyme C-terminal domain SD85_RS15830 PF00668 Condensation domain SD85_RS15830 PF00550 Phosphopantetheine attachment site SD85_RS15830 PF00975 Thioesterase domain SD85_RS15830 PF00501 AMP-binding enzyme SD85_RS15835 PF00550 Phosphopantetheine attachment site SD85_RS15835 PF00857 Isochorismatase family SD85_RS15840 PF13193 AMP-binding enzyme C-terminal domain SD85_RS15840 PF00501 AMP-binding enzyme SD85_RS15845 PF00425 chorismate binding enzyme SD85_RS15850 PF00106 short chain dehydrogenase SD85_RS15855 PF00756 Putative esterase SD85_RS15860 PF00174 Oxidoreductase molybdopterin binding domain SD85_RS15865 PF02632 BioY family SD85_RS15870 PF03553 Na+/H+ antiporter family SD85_RS15870 PF13726 Na+-H+ antiporter family SD85_RS15875 PF00883 Cytosol aminopeptidase family, catalytic domain SD85_RS15875 PF02789 Cytosol aminopeptidase family, N-terminal domain SD85_RS15880 PF02681 Divergent PAP2 family SD85_RS15885 PF06725 3D domain SD85_RS15890 PF14068 Putative membrane protein SD85_RS15895 PF17302 Family of unknown function (DUF5351) SD85_RS15900 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_RS15905 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_RS15915 PF00478 IMP dehydrogenase / GMP reductase domain SD85_RS15930 PF00005 ABC transporter SD85_RS15940 PF09221 Bacteriocin class IId cyclical uberolysin-like SD85_RS15950 PF00583 Acetyltransferase (GNAT) family SD85_RS15960 PF01521 Iron-sulphur cluster biosynthesis SD85_RS15965 PF01678 Diaminopimelate epimerase SD85_RS15970 PF01773 Na+ dependent nucleoside transporter N-terminus SD85_RS15970 PF07662 Na+ dependent nucleoside transporter C-terminus SD85_RS15975 PF07293 Protein of unknown function (DUF1450) SD85_RS15980 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_RS15985 PF07315 Protein of unknown function (DUF1462) SD85_RS15990 PF01106 NifU-like domain SD85_RS15995 PF07676 WD40-like Beta Propeller Repeat SD85_RS15995 PF00326 Prolyl oligopeptidase family SD85_RS16000 PF08544 GHMP kinases C terminal SD85_RS16000 PF00288 GHMP kinases N terminal domain SD85_RS16005 PF00291 Pyridoxal-phosphate dependent enzyme SD85_RS16010 PF03447 Homoserine dehydrogenase, NAD binding domain SD85_RS16010 PF01842 ACT domain SD85_RS16010 PF00742 Homoserine dehydrogenase SD85_RS16020 PF04608 Phosphatidylglycerophosphatase A SD85_RS16025 PF13344 Haloacid dehalogenase-like hydrolase SD85_RS16030 PF01934 Protein of unknown function DUF86 SD85_RS16035 PF06265 Protein of unknown function (DUF1027) SD85_RS16040 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) SD85_RS16045 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family SD85_RS16045 PF04055 Radical SAM superfamily SD85_RS16050 PF01551 Peptidase family M23 SD85_RS16055 PF09560 Sporulation protein YunB (Spo_YunB) SD85_RS16060 PF08827 Domain of unknown function (DUF1805) SD85_RS16065 PF02872 5'-nucleotidase, C-terminal domain SD85_RS16070 PF01925 Sulfite exporter TauE/SafE SD85_RS16075 PF01904 Protein of unknown function DUF72 SD85_RS16085 PF01979 Amidohydrolase family SD85_RS16090 PF07905 Purine catabolism regulatory protein-like family SD85_RS16090 PF13556 PucR C-terminal helix-turn-helix domain SD85_RS16090 PF17853 GGDEF-like domain SD85_RS16095 PF00860 Permease family SD85_RS16100 PF00860 Permease family SD85_RS16105 PF09349 OHCU decarboxylase SD85_RS16105 PF01014 Uricase SD85_RS16110 PF00576 HIUase/Transthyretin family SD85_RS16125 PF00111 2Fe-2S iron-sulfur cluster binding domain SD85_RS16125 PF01799 [2Fe-2S] binding domain SD85_RS16130 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SD85_RS16130 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SD85_RS16135 PF00941 FAD binding domain in molybdopterin dehydrogenase SD85_RS16140 PF12804 MobA-like NTP transferase domain SD85_RS16145 PF02625 XdhC and CoxI family SD85_RS16145 PF13478 XdhC Rossmann domain SD85_RS16150 PF00266 Aminotransferase class-V SD85_RS16155 PF01546 Peptidase family M20/M25/M40 SD85_RS16170 PF04231 Endonuclease I SD85_RS16175 PF00005 ABC transporter SD85_RS16175 PF03459 TOBE domain SD85_RS16175 PF17912 MalK OB fold domain SD85_RS16180 PF00392 Bacterial regulatory proteins, gntR family SD85_RS16180 PF07702 UTRA domain SD85_RS16185 PF00294 pfkB family carbohydrate kinase SD85_RS16190 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS16195 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS16200 PF01547 Bacterial extracellular solute-binding protein SD85_RS16205 PF01380 SIS domain SD85_RS16210 PF01541 GIY-YIG catalytic domain SD85_RS16215 PF01266 FAD dependent oxidoreductase SD85_RS16230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_RS16240 PF01458 Uncharacterized protein family (UPF0051) SD85_RS16245 PF01592 NifU-like N terminal domain SD85_RS16250 PF00266 Aminotransferase class-V SD85_RS16255 PF01458 Uncharacterized protein family (UPF0051) SD85_RS16260 PF00005 ABC transporter SD85_RS16270 PF02627 Carboxymuconolactone decarboxylase family SD85_RS16275 PF03180 NLPA lipoprotein SD85_RS16280 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS16285 PF09383 NIL domain SD85_RS16285 PF00005 ABC transporter SD85_RS16290 PF02036 SCP-2 sterol transfer family SD85_RS16295 PF00085 Thioredoxin SD85_RS16300 PF01751 Toprim domain SD85_RS16305 PF10830 Protein of unknown function (DUF2553) SD85_RS16310 PF01597 Glycine cleavage H-protein SD85_RS16315 PF03960 ArsC family SD85_RS16320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SD85_RS16320 PF02770 Acyl-CoA dehydrogenase, middle domain SD85_RS16320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SD85_RS16325 PF00108 Thiolase, N-terminal domain SD85_RS16325 PF02803 Thiolase, C-terminal domain SD85_RS16330 PF00378 Enoyl-CoA hydratase/isomerase SD85_RS16330 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SD85_RS16330 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SD85_RS16335 PF14115 YuzL-like protein SD85_RS16340 PF01619 Proline dehydrogenase SD85_RS16350 PF07875 Coat F domain SD85_RS16355 PF01047 MarR family SD85_RS16360 PF07690 Major Facilitator Superfamily SD85_RS16365 PF14552 Tautomerase enzyme SD85_RS16375 PF03466 LysR substrate binding domain SD85_RS16375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_RS16380 PF10835 Protein of unknown function (DUF2573) SD85_RS16385 PF00005 ABC transporter SD85_RS16390 PF14039 YusW-like protein SD85_RS16400 PF00106 short chain dehydrogenase SD85_RS16405 PF00210 Ferritin-like domain SD85_RS16410 PF13180 PDZ domain SD85_RS16415 PF00072 Response regulator receiver domain SD85_RS16415 PF00486 Transcriptional regulatory protein, C terminal SD85_RS16420 PF00672 HAMP domain SD85_RS16420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS16420 PF00512 His Kinase A (phospho-acceptor) domain SD85_RS16430 PF00440 Bacterial regulatory proteins, tetR family SD85_RS16435 PF00206 Lyase SD85_RS16435 PF10415 Fumarase C C-terminus SD85_RS16440 PF13113 Protein of unknown function (DUF3970) SD85_RS16445 PF03323 Bacillus/Clostridium GerA spore germination protein SD85_RS16450 PF03845 Spore germination protein SD85_RS16455 PF05504 Spore germination B3/ GerAC like, C-terminal SD85_RS16460 PF00196 Bacterial regulatory proteins, luxR family SD85_RS16460 PF00072 Response regulator receiver domain SD85_RS16465 PF07730 Histidine kinase SD85_RS16465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS16465 PF00672 HAMP domain SD85_RS16470 PF09922 Cell wall-active antibiotics response 4TMS YvqF SD85_RS16475 PF13349 Putative adhesin SD85_RS16480 PF04012 PspA/IM30 family SD85_RS16490 PF07690 Major Facilitator Superfamily SD85_RS16495 PF01923 Cobalamin adenosyltransferase SD85_RS16500 PF00005 ABC transporter SD85_RS16505 PF01032 FecCD transport family SD85_RS16510 PF01497 Periplasmic binding protein SD85_RS16520 PF00106 short chain dehydrogenase SD85_RS16525 PF08450 SMP-30/Gluconolactonase/LRE-like region SD85_RS16530 PF00512 His Kinase A (phospho-acceptor) domain SD85_RS16530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS16535 PF00072 Response regulator receiver domain SD85_RS16535 PF00486 Transcriptional regulatory protein, C terminal SD85_RS16545 PF04545 Sigma-70, region 4 SD85_RS16550 PF12841 YvrJ protein family SD85_RS16555 PF00190 Cupin SD85_RS16560 PF14184 Regulatory protein YrvL SD85_RS16565 PF12704 MacB-like periplasmic core domain SD85_RS16565 PF02687 FtsX-like permease family SD85_RS16570 PF00005 ABC transporter SD85_RS16575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SD85_RS16580 PF00005 ABC transporter SD85_RS16585 PF01032 FecCD transport family SD85_RS16590 PF01032 FecCD transport family SD85_RS16595 PF01497 Periplasmic binding protein SD85_RS16610 PF13520 Amino acid permease SD85_RS16615 PF09575 Small spore protein J (Spore_SspJ) SD85_RS16620 PF04307 LexA-binding, inner membrane-associated putative hydrolase SD85_RS16625 PF00884 Sulfatase SD85_RS16630 PF12727 PBP superfamily domain SD85_RS16630 PF12728 Helix-turn-helix domain SD85_RS16640 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS16645 PF00248 Aldo/keto reductase family SD85_RS16655 PF00999 Sodium/hydrogen exchanger family SD85_RS16660 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SD85_RS16660 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SD85_RS16665 PF00667 FAD binding domain SD85_RS16665 PF00175 Oxidoreductase NAD-binding domain SD85_RS16665 PF00258 Flavodoxin SD85_RS16670 PF13538 UvrD-like helicase C-terminal domain SD85_RS16675 PF03458 UPF0126 domain SD85_RS16680 PF02600 Disulfide bond formation protein DsbB SD85_RS16685 PF13462 Thioredoxin SD85_RS16690 PF00403 Heavy-metal-associated domain SD85_RS16695 PF00403 Heavy-metal-associated domain SD85_RS16700 PF00403 Heavy-metal-associated domain SD85_RS16705 PF02583 Metal-sensitive transcriptional repressor SD85_RS16710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SD85_RS16710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SD85_RS16715 PF02525 Flavodoxin-like fold SD85_RS16725 PF07729 FCD domain SD85_RS16725 PF00392 Bacterial regulatory proteins, gntR family SD85_RS16730 PF00892 EamA-like transporter family SD85_RS16735 PF00106 short chain dehydrogenase SD85_RS16760 PF01668 SmpB protein SD85_RS16765 PF00575 S1 RNA binding domain SD85_RS16765 PF00773 RNB domain SD85_RS16765 PF08206 Ribonuclease B OB domain SD85_RS16765 PF17876 Cold shock domain SD85_RS16770 PF12146 Serine aminopeptidase, S33 SD85_RS16775 PF03840 Preprotein translocase SecG subunit SD85_RS16780 PF00561 alpha/beta hydrolase fold SD85_RS16785 PF01381 Helix-turn-helix SD85_RS16800 PF01638 HxlR-like helix-turn-helix SD85_RS16805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS16805 PF00512 His Kinase A (phospho-acceptor) domain SD85_RS16810 PF00486 Transcriptional regulatory protein, C terminal SD85_RS16810 PF00072 Response regulator receiver domain SD85_RS16825 PF00005 ABC transporter SD85_RS16835 PF02052 Gallidermin SD85_RS16840 PF05147 Lanthionine synthetase C-like protein SD85_RS16845 PF00005 ABC transporter SD85_RS16850 PF14028 Lantibiotic biosynthesis dehydratase C-term SD85_RS16850 PF04738 Lantibiotic dehydratase, N terminus SD85_RS16855 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS16860 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SD85_RS16865 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS16870 PF00571 CBS domain SD85_RS16870 PF00005 ABC transporter SD85_RS16875 PF12802 MarR family SD85_RS16880 PF13276 HTH-like domain SD85_RS16880 PF00665 Integrase core domain SD85_RS16880 PF13333 Integrase core domain SD85_RS16890 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS16895 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SD85_RS16900 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS16905 PF00571 CBS domain SD85_RS16905 PF00005 ABC transporter SD85_RS16910 PF12802 MarR family SD85_RS16915 PF08000 Bacterial PH domain SD85_RS16915 PF11724 YvbH-like oligomerisation region SD85_RS16925 PF13240 zinc-ribbon domain SD85_RS16930 PF00583 Acetyltransferase (GNAT) family SD85_RS16935 PF00113 Enolase, C-terminal TIM barrel domain SD85_RS16935 PF03952 Enolase, N-terminal domain SD85_RS16940 PF01676 Metalloenzyme superfamily SD85_RS16940 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SD85_RS16945 PF00121 Triosephosphate isomerase SD85_RS16950 PF00162 Phosphoglycerate kinase SD85_RS16960 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SD85_RS16960 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SD85_RS16965 PF04198 Putative sugar-binding domain SD85_RS16970 PF00083 Sugar (and other) transporter SD85_RS16975 PF00392 Bacterial regulatory proteins, gntR family SD85_RS16980 PF00296 Luciferase-like monooxygenase SD85_RS16985 PF00892 EamA-like transporter family SD85_RS16990 PF00324 Amino acid permease SD85_RS16995 PF00704 Glycosyl hydrolases family 18 SD85_RS17000 PF02589 LUD domain SD85_RS17005 PF02589 LUD domain SD85_RS17005 PF11870 Domain of unknown function (DUF3390) SD85_RS17005 PF13183 4Fe-4S dicluster domain SD85_RS17010 PF02754 Cysteine-rich domain SD85_RS17025 PF00196 Bacterial regulatory proteins, luxR family SD85_RS17025 PF00072 Response regulator receiver domain SD85_RS17030 PF07730 Histidine kinase SD85_RS17030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS17040 PF00005 ABC transporter SD85_RS17045 PF12697 Alpha/beta hydrolase family SD85_RS17050 PF13426 PAS domain SD85_RS17050 PF07228 Stage II sporulation protein E (SpoIIE) SD85_RS17060 PF08532 Beta-galactosidase trimerisation domain SD85_RS17060 PF02449 Beta-galactosidase SD85_RS17060 PF08533 Beta-galactosidase C-terminal domain SD85_RS17065 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS17070 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS17075 PF13416 Bacterial extracellular solute-binding protein SD85_RS17080 PF00356 Bacterial regulatory proteins, lacI family SD85_RS17085 PF07729 FCD domain SD85_RS17085 PF00392 Bacterial regulatory proteins, gntR family SD85_RS17090 PF02652 L-lactate permease SD85_RS17095 PF04552 Sigma-54, DNA binding domain SD85_RS17095 PF04963 Sigma-54 factor, core binding domain SD85_RS17095 PF00309 Sigma-54 factor, Activator interacting domain (AID) SD85_RS17100 PF09628 YvfG protein SD85_RS17105 PF04230 Polysaccharide pyruvyl transferase SD85_RS17110 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SD85_RS17115 PF00132 Bacterial transferase hexapeptide (six repeats) SD85_RS17115 PF17836 PglD N-terminal domain SD85_RS17120 PF02397 Bacterial sugar transferase SD85_RS17125 PF14667 Polysaccharide biosynthesis C-terminal domain SD85_RS17125 PF01943 Polysaccharide biosynthesis protein SD85_RS17130 PF00535 Glycosyl transferase family 2 SD85_RS17135 PF04230 Polysaccharide pyruvyl transferase SD85_RS17140 PF00535 Glycosyl transferase family 2 SD85_RS17150 PF00534 Glycosyl transferases group 1 SD85_RS17150 PF13439 Glycosyltransferase Family 4 SD85_RS17155 PF00535 Glycosyl transferase family 2 SD85_RS17160 PF00534 Glycosyl transferases group 1 SD85_RS17160 PF13439 Glycosyltransferase Family 4 SD85_RS17165 PF02719 Polysaccharide biosynthesis protein SD85_RS17170 PF13614 AAA domain SD85_RS17175 PF02706 Chain length determinant protein SD85_RS17180 PF01381 Helix-turn-helix SD85_RS17180 PF08671 Anti-repressor SinI SD85_RS17185 PF00135 Carboxylesterase family SD85_RS17195 PF05870 Phenolic acid decarboxylase (PAD) SD85_RS17205 PF01177 Asp/Glu/Hydantoin racemase SD85_RS17210 PF11954 Domain of unknown function (DUF3471) SD85_RS17210 PF00144 Beta-lactamase SD85_RS17215 PF02435 Levansucrase/Invertase SD85_RS17220 PF00251 Glycosyl hydrolases family 32 N-terminal domain SD85_RS17220 PF08244 Glycosyl hydrolases family 32 C terminal SD85_RS17225 PF13520 Amino acid permease SD85_RS17230 PF00440 Bacterial regulatory proteins, tetR family SD85_RS17230 PF17934 Tetracyclin repressor-like, C-terminal domain SD85_RS17235 PF00893 Small Multidrug Resistance protein SD85_RS17240 PF00893 Small Multidrug Resistance protein SD85_RS17245 PF11553 Protein of unknown function (DUF3231) SD85_RS17255 PF00574 Clp protease SD85_RS17260 PF03641 Possible lysine decarboxylase SD85_RS17265 PF03819 MazG nucleotide pyrophosphohydrolase domain SD85_RS17270 PF01740 STAS domain SD85_RS17270 PF00916 Sulfate permease family SD85_RS17275 PF00484 Carbonic anhydrase SD85_RS17280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SD85_RS17280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SD85_RS17285 PF02687 FtsX-like permease family SD85_RS17290 PF00005 ABC transporter SD85_RS17295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS17300 PF00486 Transcriptional regulatory protein, C terminal SD85_RS17300 PF00072 Response regulator receiver domain SD85_RS17310 PF00797 N-acetyltransferase SD85_RS17315 PF00381 PTS HPr component phosphorylation site SD85_RS17320 PF10298 WhiA N-terminal LAGLIDADG-like domain SD85_RS17320 PF14527 WhiA LAGLIDADG-like domain SD85_RS17320 PF02650 WhiA C-terminal HTH domain SD85_RS17325 PF01933 Uncharacterised protein family UPF0052 SD85_RS17330 PF03668 P-loop ATPase protein family SD85_RS17335 PF00293 NUDIX domain SD85_RS17340 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_RS17345 PF00877 NlpC/P60 family SD85_RS17355 PF00005 ABC transporter SD85_RS17355 PF00664 ABC transporter transmembrane region SD85_RS17375 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SD85_RS17375 PF01502 Phosphoribosyl-AMP cyclohydrolase SD85_RS17380 PF00977 Histidine biosynthesis protein SD85_RS17385 PF00977 Histidine biosynthesis protein SD85_RS17390 PF00117 Glutamine amidotransferase class-I SD85_RS17395 PF00475 Imidazoleglycerol-phosphate dehydratase SD85_RS17400 PF00815 Histidinol dehydrogenase SD85_RS17405 PF01634 ATP phosphoribosyltransferase SD85_RS17410 PF13393 Histidyl-tRNA synthetase SD85_RS17415 PF13529 Peptidase_C39 like family SD85_RS17420 PF03211 Pectate lyase SD85_RS17425 PF14602 Hexapeptide repeat of succinyl-transferase SD85_RS17430 PF13419 Haloacid dehalogenase-like hydrolase SD85_RS17435 PF07670 Nucleoside recognition SD85_RS17440 PF01790 Prolipoprotein diacylglyceryl transferase SD85_RS17445 PF02603 HPr Serine kinase N terminus SD85_RS17445 PF07475 HPr Serine kinase C-terminal domain SD85_RS17450 PF01979 Amidohydrolase family SD85_RS17455 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SD85_RS17460 PF00392 Bacterial regulatory proteins, gntR family SD85_RS17460 PF07702 UTRA domain SD85_RS17465 PF00149 Calcineurin-like phosphoesterase SD85_RS17470 PF01047 MarR family SD85_RS17475 PF00067 Cytochrome P450 SD85_RS17480 PF16715 Cyclodipeptide synthase SD85_RS17485 PF01047 MarR family SD85_RS17490 PF07690 Major Facilitator Superfamily SD85_RS17495 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV SD85_RS17500 PF04024 PspC domain SD85_RS17505 PF13349 Putative adhesin SD85_RS17520 PF17760 UvrA interaction domain SD85_RS17520 PF00005 ABC transporter SD85_RS17520 PF17755 UvrA DNA-binding domain SD85_RS17525 PF02151 UvrB/uvrC motif SD85_RS17525 PF04851 Type III restriction enzyme, res subunit SD85_RS17525 PF17757 UvrB interaction domain SD85_RS17525 PF12344 Ultra-violet resistance protein B SD85_RS17525 PF00271 Helicase conserved C-terminal domain SD85_RS17530 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) SD85_RS17535 PF00391 PEP-utilising enzyme, mobile domain SD85_RS17535 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SD85_RS17540 PF00440 Bacterial regulatory proteins, tetR family SD85_RS17545 PF07690 Major Facilitator Superfamily SD85_RS17550 PF17820 PDZ domain SD85_RS17555 PF17423 Swarming motility protein SD85_RS17560 PF17820 PDZ domain SD85_RS17560 PF01471 Putative peptidoglycan binding domain SD85_RS17560 PF03572 Peptidase family S41 SD85_RS17565 PF02687 FtsX-like permease family SD85_RS17565 PF18075 FtsX extracellular domain SD85_RS17570 PF00005 ABC transporter SD85_RS17575 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SD85_RS17580 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SD85_RS17580 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SD85_RS17585 PF03462 PCRF domain SD85_RS17585 PF00472 RF-1 domain SD85_RS17590 PF07517 SecA DEAD-like domain SD85_RS17590 PF02810 SEC-C motif SD85_RS17590 PF07516 SecA Wing and Scaffold domain SD85_RS17590 PF01043 SecA preprotein cross-linking domain SD85_RS17595 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SD85_RS17595 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SD85_RS17610 PF02561 Flagellar protein FliS SD85_RS17615 PF02465 Flagellar hook-associated protein 2 N-terminus SD85_RS17615 PF07195 Flagellar hook-associated protein 2 C-terminus SD85_RS17615 PF07196 Flagellin hook IN motif SD85_RS17620 PF03646 FlaG protein SD85_RS17625 PF00669 Bacterial flagellin N-terminal helical region SD85_RS17625 PF00700 Bacterial flagellin C-terminal helical region SD85_RS17630 PF02599 Global regulator protein family SD85_RS17635 PF02623 FliW protein SD85_RS17645 PF00669 Bacterial flagellin N-terminal helical region SD85_RS17645 PF00700 Bacterial flagellin C-terminal helical region SD85_RS17650 PF00460 Flagella basal body rod protein SD85_RS17650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SD85_RS17655 PF05130 FlgN protein SD85_RS17660 PF04316 Anti-sigma-28 factor, FlgM SD85_RS17675 PF10719 Late competence development protein ComFB SD85_RS17680 PF04851 Type III restriction enzyme, res subunit SD85_RS17680 PF00271 Helicase conserved C-terminal domain SD85_RS17685 PF02645 Uncharacterised protein, DegV family COG1307 SD85_RS17690 PF00072 Response regulator receiver domain SD85_RS17690 PF00196 Bacterial regulatory proteins, luxR family SD85_RS17695 PF05384 Sensor protein DegS SD85_RS17695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS17695 PF07730 Histidine kinase SD85_RS17700 PF09186 Domain of unknown function (DUF1949) SD85_RS17700 PF01205 Uncharacterized protein family UPF0029 SD85_RS17705 PF03816 Cell envelope-related transcriptional attenuator domain SD85_RS17710 PF00953 Glycosyl transferase family 4 SD85_RS17720 PF00535 Glycosyl transferase family 2 SD85_RS17725 PF02706 Chain length determinant protein SD85_RS17730 PF04932 O-Antigen ligase SD85_RS17735 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SD85_RS17735 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SD85_RS17735 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SD85_RS17740 PF00534 Glycosyl transferases group 1 SD85_RS17740 PF13439 Glycosyltransferase Family 4 SD85_RS17745 PF01943 Polysaccharide biosynthesis protein SD85_RS17745 PF14667 Polysaccharide biosynthesis C-terminal domain SD85_RS17750 PF02397 Bacterial sugar transferase SD85_RS17755 PF00535 Glycosyl transferase family 2 SD85_RS17755 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 SD85_RS17760 PF04122 Putative cell wall binding repeat 2 SD85_RS17760 PF01520 N-acetylmuramoyl-L-alanine amidase SD85_RS17765 PF08486 Stage II sporulation protein SD85_RS17765 PF04122 Putative cell wall binding repeat 2 SD85_RS17775 PF03816 Cell envelope-related transcriptional attenuator domain SD85_RS17780 PF02350 UDP-N-acetylglucosamine 2-epimerase SD85_RS17785 PF00535 Glycosyl transferase family 2 SD85_RS17785 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 SD85_RS17790 PF00534 Glycosyl transferases group 1 SD85_RS17800 PF00483 Nucleotidyl transferase SD85_RS17805 PF00005 ABC transporter SD85_RS17810 PF01061 ABC-2 type transporter SD85_RS17825 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SD85_RS17825 PF00535 Glycosyl transferase family 2 SD85_RS17830 PF00535 Glycosyl transferase family 2 SD85_RS17835 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SD85_RS17840 PF01467 Cytidylyltransferase-like SD85_RS17845 PF03808 Glycosyl transferase WecB/TagA/CpsF family SD85_RS17850 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SD85_RS17855 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SD85_RS17860 PF08240 Alcohol dehydrogenase GroES-like domain SD85_RS17860 PF16912 Glucose dehydrogenase C-terminus SD85_RS17865 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SD85_RS17870 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SD85_RS17875 PF08239 Bacterial SH3 domain SD85_RS17875 PF05036 Sporulation related domain SD85_RS17875 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SD85_RS17880 PF01238 Phosphomannose isomerase type I SD85_RS17890 PF03323 Bacillus/Clostridium GerA spore germination protein SD85_RS17895 PF03845 Spore germination protein SD85_RS17900 PF05504 Spore germination B3/ GerAC like, C-terminal SD85_RS17905 PF00083 Sugar (and other) transporter SD85_RS17910 PF03816 Cell envelope-related transcriptional attenuator domain SD85_RS17920 PF00877 NlpC/P60 family SD85_RS17930 PF09587 Bacterial capsule synthesis protein PGA_cap SD85_RS17935 PF14102 Capsule biosynthesis CapC SD85_RS17940 PF08245 Mur ligase middle domain SD85_RS17945 PF00356 Bacterial regulatory proteins, lacI family SD85_RS17950 PF00294 pfkB family carbohydrate kinase SD85_RS17955 PF05025 RbsD / FucU transport protein family SD85_RS17960 PF00005 ABC transporter SD85_RS17965 PF02653 Branched-chain amino acid transport system / permease component SD85_RS17970 PF13407 Periplasmic binding protein domain SD85_RS17975 PF08239 Bacterial SH3 domain SD85_RS17980 PF13031 Protein of unknown function (DUF3892) SD85_RS17985 PF02525 Flavodoxin-like fold SD85_RS17990 PF03306 Alpha-acetolactate decarboxylase SD85_RS17995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SD85_RS17995 PF00205 Thiamine pyrophosphate enzyme, central domain SD85_RS17995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SD85_RS18000 PF03466 LysR substrate binding domain SD85_RS18000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_RS18005 PF08757 CotH kinase protein SD85_RS18015 PF01613 Flavin reductase like domain SD85_RS18020 PF13789 Domain of unknown function (DUF4181) SD85_RS18030 PF13404 AsnC-type helix-turn-helix domain SD85_RS18030 PF01037 Lrp/AsnC ligand binding domain SD85_RS18035 PF02417 Chromate transporter SD85_RS18040 PF02417 Chromate transporter SD85_RS18050 PF03358 NADPH-dependent FMN reductase SD85_RS18055 PF03466 LysR substrate binding domain SD85_RS18055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_RS18065 PF12833 Helix-turn-helix domain SD85_RS18065 PF01497 Periplasmic binding protein SD85_RS18070 PF04493 Endonuclease V SD85_RS18095 PF14431 YwqJ-like deaminase SD85_RS18095 PF04740 LXG domain of WXG superfamily SD85_RS18095 PF14449 Pre-toxin TG SD85_RS18105 PF16888 Domain of unknown function (DUF5082) SD85_RS18110 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SD85_RS18110 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SD85_RS18110 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SD85_RS18120 PF13614 AAA domain SD85_RS18125 PF13807 G-rich domain on putative tyrosine kinase SD85_RS18125 PF02706 Chain length determinant protein SD85_RS18135 PF04434 SWIM zinc finger SD85_RS18140 PF00271 Helicase conserved C-terminal domain SD85_RS18140 PF00176 SNF2 family N-terminal domain SD85_RS18140 PF12419 SNF2 Helicase protein SD85_RS18150 PF08220 DeoR-like helix-turn-helix domain SD85_RS18150 PF00455 DeoR C terminal sensor domain SD85_RS18155 PF00436 Single-strand binding protein family SD85_RS18165 PF14183 YwpF-like protein SD85_RS18170 PF04203 Sortase domain SD85_RS18180 PF04397 LytTr DNA-binding domain SD85_RS18180 PF00072 Response regulator receiver domain SD85_RS18185 PF06580 Histidine kinase SD85_RS18185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS18190 PF01741 Large-conductance mechanosensitive channel, MscL SD85_RS18195 PF07977 FabA-like domain SD85_RS18200 PF18801 response regulator aspartate phosphatase H, N terminal SD85_RS18205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SD85_RS18205 PF00460 Flagella basal body rod protein SD85_RS18210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SD85_RS18210 PF00460 Flagella basal body rod protein SD85_RS18220 PF12116 Stage III sporulation protein D SD85_RS18225 PF01047 MarR family SD85_RS18230 PF07690 Major Facilitator Superfamily SD85_RS18235 PF13229 Right handed beta helix region SD85_RS18240 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SD85_RS18245 PF07690 Major Facilitator Superfamily SD85_RS18250 PF00857 Isochorismatase family SD85_RS18260 PF00909 Ammonium Transporter Family SD85_RS18265 PF00543 Nitrogen regulatory protein P-II SD85_RS18270 PF01569 PAP2 superfamily SD85_RS18275 PF04892 VanZ like family SD85_RS18280 PF01551 Peptidase family M23 SD85_RS18285 PF00583 Acetyltransferase (GNAT) family SD85_RS18290 PF17319 Family of unknown function (DUF5362) SD85_RS18300 PF17370 Family of unknown function (DUF5392) SD85_RS18305 PF13091 PLD-like domain SD85_RS18305 PF13396 Phospholipase_D-nuclease N-terminal SD85_RS18310 PF13411 MerR HTH family regulatory protein SD85_RS18310 PF07739 TipAS antibiotic-recognition domain SD85_RS18315 PF17319 Family of unknown function (DUF5362) SD85_RS18320 PF13460 NAD(P)H-binding SD85_RS18325 PF02082 Transcriptional regulator SD85_RS18330 PF01979 Amidohydrolase family SD85_RS18330 PF00449 Urease alpha-subunit, N-terminal domain SD85_RS18335 PF00699 Urease beta subunit SD85_RS18340 PF00547 Urease, gamma subunit SD85_RS18345 PF00005 ABC transporter SD85_RS18350 PF00005 ABC transporter SD85_RS18350 PF12399 Branched-chain amino acid ATP-binding cassette transporter SD85_RS18360 PF02653 Branched-chain amino acid transport system / permease component SD85_RS18370 PF05532 CsbD-like SD85_RS18380 PF18801 response regulator aspartate phosphatase H, N terminal SD85_RS18380 PF17874 MalT-like TPR region SD85_RS18385 PF06463 Molybdenum Cofactor Synthesis C SD85_RS18385 PF04055 Radical SAM superfamily SD85_RS18390 PF02634 FdhD/NarQ family SD85_RS18400 PF00092 von Willebrand factor type A domain SD85_RS18410 PF00092 von Willebrand factor type A domain SD85_RS18415 PF08486 Stage II sporulation protein SD85_RS18420 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SD85_RS18425 PF08680 TATA-box binding SD85_RS18430 PF06612 Protein of unknown function (DUF1146) SD85_RS18440 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SD85_RS18440 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SD85_RS18445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SD85_RS18445 PF02874 ATP synthase alpha/beta family, beta-barrel domain SD85_RS18450 PF00231 ATP synthase SD85_RS18455 PF00306 ATP synthase alpha/beta chain, C terminal domain SD85_RS18455 PF02874 ATP synthase alpha/beta family, beta-barrel domain SD85_RS18455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SD85_RS18460 PF00213 ATP synthase delta (OSCP) subunit SD85_RS18465 PF00430 ATP synthase B/B' CF(0) SD85_RS18475 PF00137 ATP synthase subunit C SD85_RS18480 PF00119 ATP synthase A chain SD85_RS18485 PF03899 ATP synthase I chain SD85_RS18495 PF00464 Serine hydroxymethyltransferase SD85_RS18500 PF04260 Protein of unknown function (DUF436) SD85_RS18505 PF02502 Ribose/Galactose Isomerase SD85_RS18510 PF01451 Low molecular weight phosphotyrosine protein phosphatase SD85_RS18515 PF02659 Putative manganese efflux pump SD85_RS18520 PF01300 Telomere recombination SD85_RS18520 PF03481 Putative GTP-binding controlling metal-binding SD85_RS18530 PF09551 Stage II sporulation protein R (spore_II_R) SD85_RS18535 PF17094 Uncharacterised protein family (UPF0715) SD85_RS18540 PF17247 Family of unknown function (DUF5316) SD85_RS18545 PF17827 PrmC N-terminal domain SD85_RS18545 PF05175 Methyltransferase small domain SD85_RS18550 PF00472 RF-1 domain SD85_RS18550 PF03462 PCRF domain SD85_RS18555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_RS18560 PF13411 MerR HTH family regulatory protein SD85_RS18565 PF03547 Membrane transport protein SD85_RS18570 PF03949 Malic enzyme, NAD binding domain SD85_RS18570 PF00390 Malic enzyme, N-terminal domain SD85_RS18575 PF00265 Thymidine kinase SD85_RS18580 PF01197 Ribosomal protein L31 SD85_RS18585 PF07497 Rho termination factor, RNA-binding domain SD85_RS18585 PF07498 Rho termination factor, N-terminal domain SD85_RS18585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SD85_RS18595 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SD85_RS18600 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SD85_RS18605 PF00923 Transaldolase/Fructose-6-phosphate aldolase SD85_RS18610 PF01116 Fructose-bisphosphate aldolase class-II SD85_RS18615 PF00072 Response regulator receiver domain SD85_RS18620 PF10740 Domain of unknown function (DUF2529) SD85_RS18625 PF06418 CTP synthase N-terminus SD85_RS18625 PF00117 Glutamine amidotransferase class-I SD85_RS18630 PF05066 HB1, ASXL, restriction endonuclease HTH domain SD85_RS18635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SD85_RS18635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SD85_RS18635 PF02770 Acyl-CoA dehydrogenase, middle domain SD85_RS18640 PF13183 4Fe-4S dicluster domain SD85_RS18640 PF02754 Cysteine-rich domain SD85_RS18645 PF13091 PLD-like domain SD85_RS18650 PF03851 UV-endonuclease UvdE SD85_RS18660 PF01872 RibD C-terminal domain SD85_RS18665 PF00005 ABC transporter SD85_RS18665 PF00664 ABC transporter transmembrane region SD85_RS18670 PF13091 PLD-like domain SD85_RS18670 PF13396 Phospholipase_D-nuclease N-terminal SD85_RS18680 PF02665 Nitrate reductase gamma subunit SD85_RS18685 PF02613 Nitrate reductase delta subunit SD85_RS18690 PF14711 Respiratory nitrate reductase beta C-terminal SD85_RS18690 PF13247 4Fe-4S dicluster domain SD85_RS18695 PF00384 Molybdopterin oxidoreductase SD85_RS18695 PF01568 Molydopterin dinucleotide binding domain SD85_RS18695 PF14710 Respiratory nitrate reductase alpha N-terminal SD85_RS18705 PF14256 YwiC-like protein SD85_RS18710 PF00027 Cyclic nucleotide-binding domain SD85_RS18710 PF00325 Bacterial regulatory proteins, crp family SD85_RS18715 PF07690 Major Facilitator Superfamily SD85_RS18720 PF05746 DALR anticodon binding domain SD85_RS18720 PF03485 Arginyl tRNA synthetase N terminal domain SD85_RS18720 PF00750 tRNA synthetases class I (R) SD85_RS18725 PF09148 Domain of unknown function (DUF1934) SD85_RS18730 PF11420 Bacteriocin subtilosin A SD85_RS18735 PF04055 Radical SAM superfamily SD85_RS18735 PF13186 Iron-sulfur cluster-binding domain SD85_RS18735 PF05402 Coenzyme PQQ synthesis protein D (PqqD) SD85_RS18745 PF00005 ABC transporter SD85_RS18760 PF00675 Insulinase (Peptidase family M16) SD85_RS18780 PF18801 response regulator aspartate phosphatase H, N terminal SD85_RS18785 PF11131 Rap-phr extracellular signalling SD85_RS18790 PF00491 Arginase family SD85_RS18795 PF17284 Spermidine synthase tetramerisation domain SD85_RS18800 PF00912 Transglycosylase SD85_RS18800 PF00905 Penicillin binding protein transpeptidase domain SD85_RS18805 PF08741 YwhD family SD85_RS18810 PF02163 Peptidase family M50 SD85_RS18815 PF01361 Tautomerase enzyme SD85_RS18820 PF01047 MarR family SD85_RS18825 PF03129 Anticodon binding domain SD85_RS18825 PF02824 TGS domain SD85_RS18825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SD85_RS18825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SD85_RS18840 PF01966 HD domain SD85_RS18845 PF07293 Protein of unknown function (DUF1450) SD85_RS18855 PF00892 EamA-like transporter family SD85_RS18860 PF03099 Biotin/lipoate A/B protein ligase family SD85_RS18865 PF03466 LysR substrate binding domain SD85_RS18865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_RS18870 PF01515 Phosphate acetyl/butaryl transferase SD85_RS18875 PF06778 Chlorite dismutase SD85_RS18885 PF00155 Aminotransferase class I and II SD85_RS18890 PF07690 Major Facilitator Superfamily SD85_RS18905 PF07883 Cupin domain SD85_RS18915 PF07690 Major Facilitator Superfamily SD85_RS18920 PF00324 Amino acid permease SD85_RS18925 PF01546 Peptidase family M20/M25/M40 SD85_RS18930 PF00171 Aldehyde dehydrogenase family SD85_RS18935 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SD85_RS18935 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SD85_RS18940 PF17735 Biofilm surface layer A SD85_RS18945 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SD85_RS18950 PF04321 RmlD substrate binding domain SD85_RS18955 PF16363 GDP-mannose 4,6 dehydratase SD85_RS18960 PF00483 Nucleotidyl transferase SD85_RS18965 PF04101 Glycosyltransferase family 28 C-terminal domain SD85_RS18970 PF02348 Cytidylyltransferase SD85_RS18975 PF03102 NeuB family SD85_RS18975 PF08666 SAF domain SD85_RS18980 PF00583 Acetyltransferase (GNAT) family SD85_RS18985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SD85_RS18990 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SD85_RS18995 PF00535 Glycosyl transferase family 2 SD85_RS19005 PF09671 Spore coat protein (Spore_GerQ) SD85_RS19010 PF04241 Protein of unknown function (DUF423) SD85_RS19015 PF00860 Permease family SD85_RS19020 PF17261 Family of unknown function (DUF5327) SD85_RS19025 PF00171 Aldehyde dehydrogenase family SD85_RS19030 PF03167 Uracil DNA glycosylase superfamily SD85_RS19035 PF00535 Glycosyl transferase family 2 SD85_RS19050 PF03551 Transcriptional regulator PadR-like family SD85_RS19055 PF08543 Phosphomethylpyrimidine kinase SD85_RS19065 PF08244 Glycosyl hydrolases family 32 C terminal SD85_RS19065 PF00251 Glycosyl hydrolases family 32 N-terminal domain SD85_RS19070 PF02378 Phosphotransferase system, EIIC SD85_RS19070 PF00367 phosphotransferase system, EIIB SD85_RS19075 PF01226 Formate/nitrite transporter SD85_RS19080 PF03123 CAT RNA binding domain SD85_RS19080 PF00874 PRD domain SD85_RS19090 PF05922 Peptidase inhibitor I9 SD85_RS19090 PF13860 FlgD Ig-like domain SD85_RS19090 PF02225 PA domain SD85_RS19090 PF00082 Subtilase family SD85_RS19095 PF00296 Luciferase-like monooxygenase SD85_RS19100 PF00881 Nitroreductase family SD85_RS19105 PF01098 Cell cycle protein SD85_RS19125 PF17368 Spore morphogenesis and germination YwcE SD85_RS19130 PF03626 Prokaryotic Cytochrome C oxidase subunit IV SD85_RS19135 PF00510 Cytochrome c oxidase subunit III SD85_RS19140 PF00115 Cytochrome C and Quinol oxidase polypeptide I SD85_RS19145 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SD85_RS19145 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SD85_RS19150 PF04226 Transglycosylase associated protein SD85_RS19155 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SD85_RS19155 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SD85_RS19160 PF00288 GHMP kinases N terminal domain SD85_RS19160 PF08544 GHMP kinases C terminal SD85_RS19160 PF10509 Galactokinase galactose-binding signature SD85_RS19165 PF04138 GtrA-like protein SD85_RS19170 PF00440 Bacterial regulatory proteins, tetR family SD85_RS19175 PF08671 Anti-repressor SinI SD85_RS19180 PF04341 Protein of unknown function, DUF485 SD85_RS19185 PF00474 Sodium:solute symporter family SD85_RS19190 PF01323 DSBA-like thioredoxin domain SD85_RS19195 PF04261 Dyp-type peroxidase family SD85_RS19195 PF10518 TAT (twin-arginine translocation) pathway signal sequence SD85_RS19200 PF09375 Imelysin SD85_RS19205 PF02581 Thiamine monophosphate synthase SD85_RS19210 PF02110 Hydroxyethylthiazole kinase family SD85_RS19215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_RS19215 PF03466 LysR substrate binding domain SD85_RS19220 PF03788 LrgA family SD85_RS19225 PF04172 LrgB-like family SD85_RS19230 PF00005 ABC transporter SD85_RS19255 PF04172 LrgB-like family SD85_RS19260 PF12832 MFS_1 like family SD85_RS19265 PF09962 Uncharacterized conserved protein (DUF2196) SD85_RS19270 PF17785 PUA-like domain SD85_RS19270 PF10672 S-adenosylmethionine-dependent methyltransferase SD85_RS19275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_RS19280 PF10924 Protein of unknown function (DUF2711) SD85_RS19285 PF02378 Phosphotransferase system, EIIC SD85_RS19290 PF00082 Subtilase family SD85_RS19295 PF00367 phosphotransferase system, EIIB SD85_RS19295 PF02378 Phosphotransferase system, EIIC SD85_RS19300 PF00874 PRD domain SD85_RS19300 PF03123 CAT RNA binding domain SD85_RS19305 PF01501 Glycosyl transferase family 8 SD85_RS19310 PF09529 Integral membrane protein (intg_mem_TP0381) SD85_RS19315 PF01047 MarR family SD85_RS19320 PF00579 tRNA synthetases class I (W and Y) SD85_RS19320 PF01479 S4 domain SD85_RS19325 PF04389 Peptidase family M28 SD85_RS19325 PF02225 PA domain SD85_RS19330 PF04607 Region found in RelA / SpoT proteins SD85_RS19340 PF01040 UbiA prenyltransferase family SD85_RS19350 PF12459 D-Ala-teichoic acid biosynthesis protein SD85_RS19355 PF00501 AMP-binding enzyme SD85_RS19355 PF13193 AMP-binding enzyme C-terminal domain SD85_RS19360 PF03062 MBOAT, membrane-bound O-acyltransferase family SD85_RS19365 PF00550 Phosphopantetheine attachment site SD85_RS19370 PF04914 DltD protein SD85_RS19375 PF00106 short chain dehydrogenase SD85_RS19380 PF01063 Amino-transferase class IV SD85_RS19385 PF11975 Family 4 glycosyl hydrolase C-terminal domain SD85_RS19385 PF02056 Family 4 glycosyl hydrolase SD85_RS19390 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SD85_RS19395 PF02378 Phosphotransferase system, EIIC SD85_RS19400 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SD85_RS19405 PF05043 Mga helix-turn-helix domain SD85_RS19405 PF00874 PRD domain SD85_RS19405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SD85_RS19405 PF08279 HTH domain SD85_RS19410 PF02245 Methylpurine-DNA glycosylase (MPG) SD85_RS19415 PF06628 Catalase-related immune-responsive SD85_RS19415 PF00199 Catalase SD85_RS19420 PF07690 Major Facilitator Superfamily SD85_RS19425 PF12679 ABC-2 family transporter protein SD85_RS19430 PF00005 ABC transporter SD85_RS19430 PF13732 Domain of unknown function (DUF4162) SD85_RS19435 PF13396 Phospholipase_D-nuclease N-terminal SD85_RS19445 PF17280 Family of unknown function (DUF5345) SD85_RS19450 PF04542 Sigma-70 region 2 SD85_RS19450 PF08281 Sigma-70, region 4 SD85_RS19455 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SD85_RS19460 PF01256 Carbohydrate kinase SD85_RS19465 PF00664 ABC transporter transmembrane region SD85_RS19465 PF00005 ABC transporter SD85_RS19470 PF00005 ABC transporter SD85_RS19470 PF00664 ABC transporter transmembrane region SD85_RS19475 PF02322 Cytochrome bd terminal oxidase subunit II SD85_RS19480 PF01654 Cytochrome bd terminal oxidase subunit I SD85_RS19485 PF03390 2-hydroxycarboxylate transporter family SD85_RS19490 PF01435 Peptidase family M48 SD85_RS19500 PF01522 Polysaccharide deacetylase SD85_RS19505 PF02368 Bacterial Ig-like domain (group 2) SD85_RS19515 PF00005 ABC transporter SD85_RS19515 PF17912 MalK OB fold domain SD85_RS19515 PF03459 TOBE domain SD85_RS19520 PF13556 PucR C-terminal helix-turn-helix domain SD85_RS19525 PF00171 Aldehyde dehydrogenase family SD85_RS19530 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SD85_RS19530 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SD85_RS19535 PF11611 Domain of unknown function (DUF4352) SD85_RS19540 PF16363 GDP-mannose 4,6 dehydratase SD85_RS19550 PF07687 Peptidase dimerisation domain SD85_RS19550 PF01546 Peptidase family M20/M25/M40 SD85_RS19565 PF04525 LURP-one-related SD85_RS19570 PF01717 Cobalamin-independent synthase, Catalytic domain SD85_RS19575 PF01717 Cobalamin-independent synthase, Catalytic domain SD85_RS19585 PF01144 Coenzyme A transferase SD85_RS19590 PF01144 Coenzyme A transferase SD85_RS19605 PF08241 Methyltransferase domain SD85_RS19610 PF07662 Na+ dependent nucleoside transporter C-terminus SD85_RS19610 PF01773 Na+ dependent nucleoside transporter N-terminus SD85_RS19625 PF00199 Catalase SD85_RS19625 PF06628 Catalase-related immune-responsive SD85_RS19625 PF18011 C-terminal domain found in long catalases SD85_RS19630 PF03600 Citrate transporter SD85_RS19635 PF04239 Protein of unknown function (DUF421) SD85_RS19645 PF00232 Glycosyl hydrolase family 1 SD85_RS19650 PF02378 Phosphotransferase system, EIIC SD85_RS19650 PF00367 phosphotransferase system, EIIB SD85_RS19650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SD85_RS19655 PF03123 CAT RNA binding domain SD85_RS19655 PF00874 PRD domain SD85_RS19665 PF11700 Vacuole effluxer Atg22 like SD85_RS19670 PF00271 Helicase conserved C-terminal domain SD85_RS19670 PF00270 DEAD/DEAH box helicase SD85_RS19670 PF03880 DbpA RNA binding domain SD85_RS19675 PF13472 GDSL-like Lipase/Acylhydrolase family SD85_RS19705 PF14176 YxiJ-like protein SD85_RS19725 PF10898 Protein of unknown function (DUF2716) SD85_RS19780 PF05593 RHS Repeat SD85_RS19785 PF00892 EamA-like transporter family SD85_RS19795 PF03741 Integral membrane protein TerC family SD85_RS19800 PF00582 Universal stress protein family SD85_RS19805 PF00232 Glycosyl hydrolase family 1 SD85_RS19810 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SD85_RS19810 PF00367 phosphotransferase system, EIIB SD85_RS19810 PF02378 Phosphotransferase system, EIIC SD85_RS19815 PF18593 CdiI immunity protein SD85_RS19845 PF04740 LXG domain of WXG superfamily SD85_RS19845 PF14449 Pre-toxin TG SD85_RS19855 PF16888 Domain of unknown function (DUF5082) SD85_RS19860 PF16369 C-terminal lipocalin-like domain SD85_RS19860 PF04616 Glycosyl hydrolases family 43 SD85_RS19865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SD85_RS19865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SD85_RS19870 PF09021 HutP SD85_RS19875 PF00221 Aromatic amino acid lyase SD85_RS19880 PF01175 Urocanase Rossmann-like domain SD85_RS19880 PF17392 Urocanase C-terminal domain SD85_RS19880 PF17391 Urocanase N-terminal domain SD85_RS19885 PF01979 Amidohydrolase family SD85_RS19890 PF00491 Arginase family SD85_RS19895 PF00324 Amino acid permease SD85_RS19900 PF02885 Glycosyl transferase family, helical bundle domain SD85_RS19900 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SD85_RS19900 PF00591 Glycosyl transferase family, a/b domain SD85_RS19905 PF07662 Na+ dependent nucleoside transporter C-terminus SD85_RS19905 PF01773 Na+ dependent nucleoside transporter N-terminus SD85_RS19910 PF01791 DeoC/LacD family aldolase SD85_RS19915 PF04198 Putative sugar-binding domain SD85_RS19920 PF06724 Domain of Unknown Function (DUF1206) SD85_RS19925 PF04346 Ethanolamine utilisation protein, EutH SD85_RS19930 PF03972 MmgE/PrpD family SD85_RS19935 PF01546 Peptidase family M20/M25/M40 SD85_RS19935 PF07687 Peptidase dimerisation domain SD85_RS19940 PF00005 ABC transporter SD85_RS19945 PF00528 Binding-protein-dependent transport system inner membrane component SD85_RS19950 PF00497 Bacterial extracellular solute-binding proteins, family 3 SD85_RS19955 PF00583 Acetyltransferase (GNAT) family SD85_RS19960 PF00296 Luciferase-like monooxygenase SD85_RS19970 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family SD85_RS19985 PF11631 Protein of unknown function (DUF3255) SD85_RS20005 PF01497 Periplasmic binding protein SD85_RS20010 PF06486 Protein of unknown function (DUF1093) SD85_RS20015 PF02687 FtsX-like permease family SD85_RS20020 PF00005 ABC transporter SD85_RS20025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS20030 PF00072 Response regulator receiver domain SD85_RS20030 PF00486 Transcriptional regulatory protein, C terminal SD85_RS20035 PF01116 Fructose-bisphosphate aldolase class-II SD85_RS20040 PF01261 Xylose isomerase-like TIM barrel SD85_RS20045 PF01261 Xylose isomerase-like TIM barrel SD85_RS20050 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SD85_RS20050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SD85_RS20055 PF07690 Major Facilitator Superfamily SD85_RS20060 PF01261 Xylose isomerase-like TIM barrel SD85_RS20065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SD85_RS20065 PF00205 Thiamine pyrophosphate enzyme, central domain SD85_RS20065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SD85_RS20070 PF00294 pfkB family carbohydrate kinase SD85_RS20075 PF04962 KduI/IolB family SD85_RS20080 PF00171 Aldehyde dehydrogenase family SD85_RS20085 PF00455 DeoR C terminal sensor domain SD85_RS20085 PF08220 DeoR-like helix-turn-helix domain SD85_RS20090 PF00248 Aldo/keto reductase family SD85_RS20100 PF10850 Protein of unknown function (DUF2653) SD85_RS20105 PF00083 Sugar (and other) transporter SD85_RS20110 PF00183 Hsp90 protein SD85_RS20125 PF00440 Bacterial regulatory proteins, tetR family SD85_RS20130 PF00171 Aldehyde dehydrogenase family SD85_RS20135 PF17369 Family of unknown function (DUF5391) SD85_RS20140 PF06271 RDD family SD85_RS20145 PF04235 Protein of unknown function (DUF418) SD85_RS20150 PF07883 Cupin domain SD85_RS20155 PF00440 Bacterial regulatory proteins, tetR family SD85_RS20160 PF00106 short chain dehydrogenase SD85_RS20165 PF01047 MarR family SD85_RS20170 PF03788 LrgA family SD85_RS20175 PF04172 LrgB-like family SD85_RS20180 PF00999 Sodium/hydrogen exchanger family SD85_RS20185 PF04230 Polysaccharide pyruvyl transferase SD85_RS20190 PF02595 Glycerate kinase family SD85_RS20195 PF07729 FCD domain SD85_RS20195 PF00392 Bacterial regulatory proteins, gntR family SD85_RS20200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SD85_RS20200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SD85_RS20205 PF02447 GntP family permease SD85_RS20210 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SD85_RS20210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SD85_RS20215 PF00578 AhpC/TSA family SD85_RS20220 PF07992 Pyridine nucleotide-disulphide oxidoreductase SD85_RS20220 PF13192 Thioredoxin domain SD85_RS20230 PF00232 Glycosyl hydrolase family 1 SD85_RS20235 PF02378 Phosphotransferase system, EIIC SD85_RS20235 PF00367 phosphotransferase system, EIIB SD85_RS20235 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SD85_RS20240 PF07702 UTRA domain SD85_RS20240 PF00392 Bacterial regulatory proteins, gntR family SD85_RS20250 PF06874 Firmicute fructose-1,6-bisphosphatase SD85_RS20255 PF00145 C-5 cytosine-specific DNA methylase SD85_RS20280 PF02590 Predicted SPOUT methyltransferase SD85_RS20310 PF00583 Acetyltransferase (GNAT) family SD85_RS20315 PF18801 response regulator aspartate phosphatase H, N terminal SD85_RS20325 PF00491 Arginase family SD85_RS20330 PF00324 Amino acid permease SD85_RS20335 PF00202 Aminotransferase class-III SD85_RS20340 PF00158 Sigma-54 interaction domain SD85_RS20340 PF13426 PAS domain SD85_RS20340 PF02954 Bacterial regulatory protein, Fis family SD85_RS20350 PF13180 PDZ domain SD85_RS20355 PF00753 Metallo-beta-lactamase superfamily SD85_RS20360 PF09648 YycH protein SD85_RS20365 PF07435 YycH protein SD85_RS20370 PF00512 His Kinase A (phospho-acceptor) domain SD85_RS20370 PF00672 HAMP domain SD85_RS20370 PF13426 PAS domain SD85_RS20370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SD85_RS20375 PF00486 Transcriptional regulatory protein, C terminal SD85_RS20375 PF00072 Response regulator receiver domain SD85_RS20400 PF00709 Adenylosuccinate synthetase SD85_RS20405 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_RS20410 PF03796 DnaB-like helicase C terminal domain SD85_RS20410 PF00772 DnaB-like helicase N terminal domain SD85_RS20420 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) SD85_RS20430 PF14174 YycC-like protein SD85_RS20435 PF07690 Major Facilitator Superfamily SD85_RS20440 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase SD85_RS20445 PF03948 Ribosomal protein L9, C-terminal domain SD85_RS20445 PF01281 Ribosomal protein L9, N-terminal domain SD85_RS20450 PF01368 DHH family SD85_RS20450 PF02272 DHHA1 domain SD85_RS20455 PF09991 Predicted membrane protein (DUF2232) SD85_RS20465 PF07875 Coat F domain SD85_RS20470 PF01638 HxlR-like helix-turn-helix SD85_RS20475 PF01368 DHH family SD85_RS20475 PF02833 DHHA2 domain SD85_RS20490 PF07690 Major Facilitator Superfamily SD85_RS20505 PF07690 Major Facilitator Superfamily SD85_RS20510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SD85_RS20510 PF03466 LysR substrate binding domain SD85_RS20515 PF13673 Acetyltransferase (GNAT) domain SD85_RS20525 PF00753 Metallo-beta-lactamase superfamily SD85_RS20530 PF01638 HxlR-like helix-turn-helix SD85_RS20540 PF01047 MarR family SD85_RS20545 PF13673 Acetyltransferase (GNAT) domain SD85_RS20555 PF03190 Protein of unknown function, DUF255 SD85_RS20560 PF02517 CPBP intramembrane metalloprotease SD85_RS20565 PF00083 Sugar (and other) transporter SD85_RS20570 PF12464 Maltose acetyltransferase SD85_RS20570 PF14602 Hexapeptide repeat of succinyl-transferase SD85_RS20575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SD85_RS20580 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SD85_RS20580 PF00356 Bacterial regulatory proteins, lacI family SD85_RS20585 PF03372 Endonuclease/Exonuclease/phosphatase family SD85_RS20590 PF01084 Ribosomal protein S18 SD85_RS20595 PF00436 Single-strand binding protein family SD85_RS20600 PF01250 Ribosomal protein S6 SD85_RS20605 PF01926 50S ribosome-binding GTPase SD85_RS20605 PF06071 Protein of unknown function (DUF933) SD85_RS20610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SD85_RS20610 PF01568 Molydopterin dinucleotide binding domain SD85_RS20610 PF00384 Molybdopterin oxidoreductase SD85_RS20615 PF06107 Bacterial protein of unknown function (DUF951) SD85_RS20625 PF06866 Protein of unknown function (DUF1256) SD85_RS20630 PF17762 HTH domain found in ParB protein SD85_RS20630 PF02195 ParB-like nuclease domain SD85_RS20635 PF13614 AAA domain SD85_RS20640 PF06713 Bacterial PH domain SD85_RS20645 PF02195 ParB-like nuclease domain SD85_RS20645 PF17762 HTH domain found in ParB protein SD85_RS20650 PF02527 rRNA small subunit methyltransferase G SD85_RS20655 PF13932 GidA associated domain SD85_RS20655 PF01134 Glucose inhibited division protein A SD85_RS20660 PF12631 MnmE helical domain SD85_RS20660 PF10396 GTP-binding protein TrmE N-terminus SD85_RS20660 PF01926 50S ribosome-binding GTPase SD85_RS20665 PF01424 R3H domain SD85_RS20665 PF14804 Jag N-terminus SD85_RS20670 PF02096 60Kd inner membrane protein SD85_RS20675 PF00825 Ribonuclease P SD85_RS20680 PF00468 Ribosomal protein L34 SD85_RS20705 PF02348 Cytidylyltransferase