S100333_RS00005 SM00382 ATPases associated with a variety of cellular activities S100333_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain S100333_RS00010 SM00480 DNA polymerase III beta subunit S100333_RS00030 SM00387 Histidine kinase-like ATPases S100333_RS00030 SM00433 TopoisomeraseII S100333_RS00035 SM00434 DNA Topoisomerase IV S100333_RS00070 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_RS00070 SM01240 S100333_RS00070 S100333_RS00075 SM00936 Penicillin-binding protein 5, C-terminal domain S100333_RS00110 SM00257 Lysin motif S100333_RS00110 SM00636 S100333_RS00110 S100333_RS00130 SM00382 ATPases associated with a variety of cellular activities S100333_RS00140 SM00493 S100333_RS00140 S100333_RS00235 SM00465 GIY-YIG type nucleases (URI domain) S100333_RS00250 SM00966 SpoVT / AbrB like domain S100333_RS00265 SM01208 S100333_RS00265 S100333_RS00270 SM00493 S100333_RS00270 S100333_RS00275 SM00650 Ribosomal RNA adenine dimethylases S100333_RS00320 SM01400 S100333_RS00320 S100333_RS00340 SM00487 DEAD-like helicases superfamily S100333_RS00340 SM00490 helicase superfamily c-terminal domain S100333_RS00340 SM00982 S100333_RS00340 S100333_RS00340 SM01058 CarD-like/TRCF domain S100333_RS00345 SM00966 SpoVT / AbrB like domain S100333_RS00360 SM00363 S4 RNA-binding domain S100333_RS00380 SM00316 Ribosomal protein S1-like RNA-binding domain S100333_RS00395 SM00331 Sigma factor PP2C-like phosphatases S100333_RS00395 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain S100333_RS00405 SM00220 Serine/Threonine protein kinases, catalytic domain S100333_RS00410 SM00977 TilS substrate C-terminal domain S100333_RS00420 SM00382 ATPases associated with a variety of cellular activities S100333_RS00465 SM00905 Dihydroneopterin aldolase S100333_RS00475 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS00580 SM00382 ATPases associated with a variety of cellular activities S100333_RS00580 SM01086 C-terminal, D2-small domain, of ClpB protein S100333_RS00585 SM00382 ATPases associated with a variety of cellular activities S100333_RS00595 SM00670 Large family of predicted nucleotide-binding domains S100333_RS00625 SM00840 S100333_RS00625 S100333_RS00630 SM00535 Ribonuclease III family S100333_RS00635 SM00967 RNA 2'-O ribose methyltransferase substrate binding S100333_RS00660 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. S100333_RS00660 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. S100333_RS00665 SM00649 Ribosomal protein L11/L12 S100333_RS00695 SM00663 RNA polymerase I subunit A N-terminus S100333_RS00715 SM00838 Elongation factor G C-terminus S100333_RS00715 SM00889 Elongation factor G, domain IV S100333_RS00730 SM01403 S100333_RS00730 S100333_RS00750 SM01382 S100333_RS00750 S100333_RS00750 SM01383 S100333_RS00750 S100333_RS00765 SM00322 K homology RNA-binding domain S100333_RS00785 SM01374 S100333_RS00785 S100333_RS00790 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. S100333_RS00855 SM00316 Ribosomal protein S1-like RNA-binding domain S100333_RS00875 SM00662 RNA polymerases D S100333_RS00885 SM00382 ATPases associated with a variety of cellular activities S100333_RS00890 SM00382 ATPases associated with a variety of cellular activities S100333_RS00930 SM00646 S100333_RS00930 S100333_RS00945 SM01251 S100333_RS00945 S100333_RS01070 SM00342 helix_turn_helix, arabinose operon control protein S100333_RS01180 SM00342 helix_turn_helix, arabinose operon control protein S100333_RS01215 SM00862 Transcriptional regulatory protein, C terminal S100333_RS01220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_RS01220 SM00388 His Kinase A (phosphoacceptor) domain S100333_RS01305 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS01335 SM00342 helix_turn_helix, arabinose operon control protein S100333_RS01350 SM00257 Lysin motif S100333_RS01400 SM00450 Rhodanese Homology Domain S100333_RS01420 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS01420 SM00866 S100333_RS01420 S100333_RS01460 SM00387 Histidine kinase-like ATPases S100333_RS01475 SM01130 S100333_RS01475 S100333_RS01490 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain S100333_RS01495 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS01495 SM00895 S100333_RS01495 S100333_RS01500 SM00858 S100333_RS01500 S100333_RS01520 SM00448 cheY-homologous receiver domain S100333_RS01520 SM00862 Transcriptional regulatory protein, C terminal S100333_RS01525 SM00387 Histidine kinase-like ATPases S100333_RS01525 SM00388 His Kinase A (phosphoacceptor) domain S100333_RS01530 SM00382 ATPases associated with a variety of cellular activities S100333_RS01550 SM00327 von Willebrand factor (vWF) type A domain S100333_RS01595 SM00870 S100333_RS01595 S100333_RS01615 SM00387 Histidine kinase-like ATPases S100333_RS01625 SM00382 ATPases associated with a variety of cellular activities S100333_RS01685 SM00382 ATPases associated with a variety of cellular activities S100333_RS01745 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S100333_RS01750 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_RS01750 SM00382 ATPases associated with a variety of cellular activities S100333_RS01915 SM00926 Molybdopterin oxidoreductase Fe4S4 domain S100333_RS01955 SM00062 Bacterial periplasmic substrate-binding proteins S100333_RS01975 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS02015 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family S100333_RS02025 SM00823 Phosphopantetheine attachment site S100333_RS02025 SM01294 S100333_RS02025 S100333_RS02030 SM00823 Phosphopantetheine attachment site S100333_RS02030 SM01294 S100333_RS02030 S100333_RS02035 SM00823 Phosphopantetheine attachment site S100333_RS02065 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS02080 SM00382 ATPases associated with a variety of cellular activities S100333_RS02090 SM00062 Bacterial periplasmic substrate-binding proteins S100333_RS02110 SM00710 Parallel beta-helix repeats S100333_RS02110 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses S100333_RS02135 SM00382 ATPases associated with a variety of cellular activities S100333_RS02150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_RS02150 SM00387 Histidine kinase-like ATPases S100333_RS02150 SM00388 His Kinase A (phosphoacceptor) domain S100333_RS02155 SM00028 Tetratricopeptide repeats S100333_RS02190 SM00382 ATPases associated with a variety of cellular activities S100333_RS02225 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S100333_RS02230 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS02265 SM00420 helix_turn_helix, Deoxyribose operon repressor S100333_RS02290 SM01329 S100333_RS02290 S100333_RS02335 SM00796 Allophanate hydrolase subunit 1 S100333_RS02340 SM00797 Allophanate hydrolase subunit 2 S100333_RS02345 SM00346 helix_turn_helix isocitrate lyase regulation S100333_RS02420 SM00344 helix_turn_helix ASNC type S100333_RS02425 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain S100333_RS02425 SM00437 Bacterial DNA topoisomerase I DNA-binding domain S100333_RS02425 SM00493 S100333_RS02425 S100333_RS02445 SM00752 Horizontally Transferred TransMembrane Domain S100333_RS02505 SM00091 PAS domain S100333_RS02505 SM00387 Histidine kinase-like ATPases S100333_RS02510 SM00448 cheY-homologous receiver domain S100333_RS02525 SM00382 ATPases associated with a variety of cellular activities S100333_RS02585 SM00487 DEAD-like helicases superfamily S100333_RS02585 SM00490 helicase superfamily c-terminal domain S100333_RS02615 SM01005 Alanine racemase, C-terminal domain S100333_RS02640 SM00387 Histidine kinase-like ATPases S100333_RS02645 SM00331 Sigma factor PP2C-like phosphatases S100333_RS02665 SM00331 Sigma factor PP2C-like phosphatases S100333_RS02665 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain S100333_RS02670 SM00316 Ribosomal protein S1-like RNA-binding domain S100333_RS02670 SM00732 Likely ribonuclease with RNase H fold. S100333_RS02680 SM00731 SprT homologues. S100333_RS02750 SM00382 ATPases associated with a variety of cellular activities S100333_RS02760 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS02790 SM00357 Cold shock protein domain S100333_RS02795 SM01058 CarD-like/TRCF domain S100333_RS02815 SM00342 helix_turn_helix, arabinose operon control protein S100333_RS02825 SM00342 helix_turn_helix, arabinose operon control protein S100333_RS02825 SM00871 Bacterial transcription activator, effector binding domain S100333_RS02830 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS02875 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS02900 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S100333_RS02925 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS02940 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S100333_RS02945 SM00421 helix_turn_helix, Lux Regulon S100333_RS02945 SM00448 cheY-homologous receiver domain S100333_RS02965 SM00422 helix_turn_helix, mercury resistance S100333_RS02965 SM00871 Bacterial transcription activator, effector binding domain S100333_RS03045 SM00382 ATPases associated with a variety of cellular activities S100333_RS03060 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS03075 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS03075 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S100333_RS03090 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS03090 SM00895 S100333_RS03090 S100333_RS03095 SM00257 Lysin motif S100333_RS03095 SM00636 S100333_RS03095 S100333_RS03110 SM00098 Alkaline phosphatase homologues S100333_RS03130 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S100333_RS03165 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS03165 SM00866 S100333_RS03165 S100333_RS03250 SM00382 ATPases associated with a variety of cellular activities S100333_RS03260 SM00881 CoA binding domain S100333_RS03290 SM00883 Chaperonin 10 Kd subunit S100333_RS03300 SM00448 cheY-homologous receiver domain S100333_RS03300 SM00850 LytTr DNA-binding domain S100333_RS03305 SM00793 Accessory gene regulator B S100333_RS03310 SM00387 Histidine kinase-like ATPases S100333_RS03320 SM01260 S100333_RS03320 S100333_RS03335 SM01260 S100333_RS03335 S100333_RS03340 SM00382 ATPases associated with a variety of cellular activities S100333_RS03350 SM00382 ATPases associated with a variety of cellular activities S100333_RS03365 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS03370 SM00382 ATPases associated with a variety of cellular activities S100333_RS03390 SM00829 Enoylreductase S100333_RS03435 SM00829 Enoylreductase S100333_RS03505 SM00460 Transglutaminase/protease-like homologues S100333_RS03550 SM01001 AIR carboxylase S100333_RS03560 SM00998 Adenylosuccinate lyase C-terminus S100333_RS03575 SM01211 S100333_RS03575 S100333_RS03600 SM00798 AICARFT/IMPCHase bienzyme S100333_RS03600 SM00851 MGS-like domain S100333_RS03605 SM01209 S100333_RS03605 S100333_RS03605 SM01210 S100333_RS03605 S100333_RS03610 SM00344 helix_turn_helix ASNC type S100333_RS03655 SM00278 Helix-hairpin-helix DNA-binding motif class 1 S100333_RS03655 SM00292 breast cancer carboxy-terminal domain S100333_RS03655 SM00532 Ligase N family S100333_RS03695 SM00845 GatB domain S100333_RS03710 SM00046 Diacylglycerol kinase catalytic domain (presumed) S100333_RS03790 SM00028 Tetratricopeptide repeats S100333_RS03845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_RS03845 SM00387 Histidine kinase-like ATPases S100333_RS04045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S100333_RS04050 SM00382 ATPases associated with a variety of cellular activities S100333_RS04060 SM00422 helix_turn_helix, mercury resistance S100333_RS04080 SM00382 ATPases associated with a variety of cellular activities S100333_RS04085 SM00487 DEAD-like helicases superfamily S100333_RS04085 SM00490 helicase superfamily c-terminal domain S100333_RS04100 SM00829 Enoylreductase S100333_RS04105 SM00382 ATPases associated with a variety of cellular activities S100333_RS04140 SM00656 S100333_RS04140 S100333_RS04150 SM00387 Histidine kinase-like ATPases S100333_RS04155 SM00448 cheY-homologous receiver domain S100333_RS04170 SM00849 Metallo-beta-lactamase superfamily S100333_RS04250 SM00642 Alpha-amylase domain S100333_RS04255 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS04255 SM00866 S100333_RS04255 S100333_RS04285 SM00226 Low molecular weight phosphatase family S100333_RS04345 SM00478 endonuclease III S100333_RS04390 SM00861 Transketolase, pyrimidine binding domain S100333_RS04405 SM00382 ATPases associated with a variety of cellular activities S100333_RS04465 SM00382 ATPases associated with a variety of cellular activities S100333_RS04470 SM00382 ATPases associated with a variety of cellular activities S100333_RS04485 SM00342 helix_turn_helix, arabinose operon control protein S100333_RS04505 SM00387 Histidine kinase-like ATPases S100333_RS04510 SM00421 helix_turn_helix, Lux Regulon S100333_RS04510 SM00448 cheY-homologous receiver domain S100333_RS04515 SM00382 ATPases associated with a variety of cellular activities S100333_RS04570 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS04650 SM00287 Bacterial SH3 domain homologues S100333_RS04680 SM00478 endonuclease III S100333_RS04680 SM00525 S100333_RS04680 S100333_RS04710 SM00382 ATPases associated with a variety of cellular activities S100333_RS04875 SM01060 S100333_RS04875 S100333_RS04880 SM00382 ATPases associated with a variety of cellular activities S100333_RS04885 SM00062 Bacterial periplasmic substrate-binding proteins S100333_RS04915 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS04930 SM00567 E-Z type HEAT repeats S100333_RS04960 SM00763 PrkA AAA domain S100333_RS05005 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS05010 SM00382 ATPases associated with a variety of cellular activities S100333_RS05015 SM00382 ATPases associated with a variety of cellular activities S100333_RS05025 SM00357 Cold shock protein domain S100333_RS05100 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS05155 SM00028 Tetratricopeptide repeats S100333_RS05185 SM00318 Staphylococcal nuclease homologues S100333_RS05195 SM00363 S4 RNA-binding domain S100333_RS05205 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_RS05250 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. S100333_RS05250 SM00387 Histidine kinase-like ATPases S100333_RS05255 SM00421 helix_turn_helix, Lux Regulon S100333_RS05255 SM00448 cheY-homologous receiver domain S100333_RS05275 SM00257 Lysin motif S100333_RS05295 SM00098 Alkaline phosphatase homologues S100333_RS05300 SM00257 Lysin motif S100333_RS05330 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS05360 SM00563 Phosphate acyltransferases S100333_RS05365 SM01091 Transporter associated domain S100333_RS05370 SM00422 helix_turn_helix, mercury resistance S100333_RS05380 SM01091 Transporter associated domain S100333_RS05440 SM00382 ATPases associated with a variety of cellular activities S100333_RS05445 SM00382 ATPases associated with a variety of cellular activities S100333_RS05500 SM00729 Elongator protein 3, MiaB family, Radical SAM S100333_RS05530 SM00382 ATPases associated with a variety of cellular activities S100333_RS05550 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S100333_RS05590 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS05620 SM00382 ATPases associated with a variety of cellular activities S100333_RS05705 SM01022 S100333_RS05705 S100333_RS05720 SM00849 Metallo-beta-lactamase superfamily S100333_RS05760 SM00829 Enoylreductase S100333_RS05770 SM00855 Phosphoglycerate mutase family S100333_RS05790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S100333_RS05805 SM00914 S100333_RS05805 S100333_RS05820 SM00894 Excalibur calcium-binding domain S100333_RS05855 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS05880 SM00354 helix_turn _helix lactose operon repressor S100333_RS06010 SM00342 helix_turn_helix, arabinose operon control protein S100333_RS06015 SM00354 helix_turn _helix lactose operon repressor S100333_RS06035 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS06070 SM00316 Ribosomal protein S1-like RNA-binding domain S100333_RS06080 SM00752 Horizontally Transferred TransMembrane Domain S100333_RS06160 SM00859 Semialdehyde dehydrogenase, NAD binding domain S100333_RS06180 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain S100333_RS06185 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain S100333_RS06240 SM00825 Beta-ketoacyl synthase S100333_RS06250 SM00382 ATPases associated with a variety of cellular activities S100333_RS06255 SM00382 ATPases associated with a variety of cellular activities S100333_RS06300 SM00382 ATPases associated with a variety of cellular activities S100333_RS06305 SM00382 ATPases associated with a variety of cellular activities S100333_RS06370 SM01118 S100333_RS06370 S100333_RS06380 SM00954 Region found in RelA / SpoT proteins S100333_RS06575 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS06580 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS06615 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS06655 SM00860 SMI1 / KNR4 family S100333_RS06730 SM00635 Bacterial Ig-like domain 2 S100333_RS06880 SM00382 ATPases associated with a variety of cellular activities S100333_RS06920 SM00829 Enoylreductase S100333_RS06940 SM00354 helix_turn _helix lactose operon repressor S100333_RS06950 SM00858 S100333_RS06950 S100333_RS06985 SM00028 Tetratricopeptide repeats S100333_RS07000 SM00257 Lysin motif S100333_RS07000 SM00644 S100333_RS07000 S100333_RS07025 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS07040 SM00382 ATPases associated with a variety of cellular activities S100333_RS07140 SM00257 Lysin motif S100333_RS07205 SM00257 Lysin motif S100333_RS07205 SM00644 S100333_RS07205 S100333_RS07250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S100333_RS07275 SM00382 ATPases associated with a variety of cellular activities S100333_RS07290 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain S100333_RS07300 SM00382 ATPases associated with a variety of cellular activities S100333_RS07360 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase S100333_RS07375 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS07415 SM00382 ATPases associated with a variety of cellular activities S100333_RS07430 SM00448 cheY-homologous receiver domain S100333_RS07430 SM00862 Transcriptional regulatory protein, C terminal S100333_RS07460 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_RS07460 SM00924 MgtE intracellular N domain S100333_RS07465 SM00422 helix_turn_helix, mercury resistance S100333_RS07480 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS07515 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen S100333_RS07520 SM00052 Putative diguanylate phosphodiesterase S100333_RS07520 SM00267 diguanylate cyclase S100333_RS07580 SM00091 PAS domain S100333_RS07580 SM00387 Histidine kinase-like ATPases S100333_RS07580 SM00388 His Kinase A (phosphoacceptor) domain S100333_RS07620 SM01007 Class II Aldolase and Adducin N-terminal domain S100333_RS07645 SM00387 Histidine kinase-like ATPases S100333_RS07645 SM00388 His Kinase A (phosphoacceptor) domain S100333_RS07650 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS07665 SM00382 ATPases associated with a variety of cellular activities S100333_RS07665 SM01086 C-terminal, D2-small domain, of ClpB protein S100333_RS07740 SM00354 helix_turn _helix lactose operon repressor S100333_RS07745 SM01061 CAT RNA binding domain S100333_RS07780 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S100333_RS07780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_RS07805 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) S100333_RS07805 SM00091 PAS domain S100333_RS07805 SM00387 Histidine kinase-like ATPases S100333_RS07805 SM00388 His Kinase A (phosphoacceptor) domain S100333_RS07820 SM00260 Two component signalling adaptor domain S100333_RS07820 SM00448 cheY-homologous receiver domain S100333_RS07835 SM00257 Lysin motif S100333_RS07850 SM00052 Putative diguanylate phosphodiesterase S100333_RS07950 SM00852 Probable molybdopterin binding domain S100333_RS07975 SM00382 ATPases associated with a variety of cellular activities S100333_RS07990 SM00382 ATPases associated with a variety of cellular activities S100333_RS07995 SM01066 Carbohydrate binding domain S100333_RS08000 SM00420 helix_turn_helix, Deoxyribose operon repressor S100333_RS08000 SM01134 S100333_RS08000 S100333_RS08025 SM00382 ATPases associated with a variety of cellular activities S100333_RS08050 SM00966 SpoVT / AbrB like domain S100333_RS08055 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) S100333_RS08055 SM00091 PAS domain S100333_RS08055 SM00387 Histidine kinase-like ATPases S100333_RS08055 SM00388 His Kinase A (phosphoacceptor) domain S100333_RS08075 SM00849 Metallo-beta-lactamase superfamily S100333_RS08110 SM00861 Transketolase, pyrimidine binding domain S100333_RS08210 SM00838 Elongation factor G C-terminus S100333_RS08230 SM00670 Large family of predicted nucleotide-binding domains S100333_RS08255 SM00878 Biotin carboxylase C-terminal domain S100333_RS08300 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_RS08350 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S100333_RS08410 SM00740 S100333_RS08410 S100333_RS08415 SM00740 S100333_RS08415 S100333_RS08470 SM00842 Cell division protein FtsA S100333_RS08475 SM00864 Tubulin/FtsZ family, GTPase domain S100333_RS08475 SM00865 Tubulin/FtsZ family, C-terminal domain S100333_RS08500 SM00382 ATPases associated with a variety of cellular activities S100333_RS08535 SM00363 S4 RNA-binding domain S100333_RS08560 SM00363 S4 RNA-binding domain S100333_RS08585 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain S100333_RS08590 SM00851 MGS-like domain S100333_RS08590 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain S100333_RS08605 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family S100333_RS08655 SM00831 Cation transporter/ATPase, N-terminus S100333_RS08670 SM00072 Guanylate kinase homologues. S100333_RS08675 SM01409 S100333_RS08675 S100333_RS08685 SM00487 DEAD-like helicases superfamily S100333_RS08685 SM00490 helicase superfamily c-terminal domain S100333_RS08710 SM00331 Sigma factor PP2C-like phosphatases S100333_RS08710 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain S100333_RS08715 SM00220 Serine/Threonine protein kinases, catalytic domain S100333_RS08715 SM00740 S100333_RS08715 S100333_RS08730 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain S100333_RS08750 SM01120 S100333_RS08750 S100333_RS08750 SM01121 S100333_RS08750 S100333_RS08765 SM00487 DEAD-like helicases superfamily S100333_RS08765 SM00490 helicase superfamily c-terminal domain S100333_RS08780 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. S100333_RS08785 SM00822 S100333_RS08785 S100333_RS08795 SM00358 Double-stranded RNA binding motif S100333_RS08795 SM00535 Ribonuclease III family S100333_RS08800 SM00968 SMC proteins Flexible Hinge Domain S100333_RS08805 SM00382 ATPases associated with a variety of cellular activities S100333_RS08805 SM00962 SRP54-type protein, GTPase domain S100333_RS08805 SM00963 SRP54-type protein, helical bundle domain S100333_RS08825 SM00382 ATPases associated with a variety of cellular activities S100333_RS08825 SM00962 SRP54-type protein, GTPase domain S100333_RS08825 SM00963 SRP54-type protein, helical bundle domain S100333_RS08885 SM00881 CoA binding domain S100333_RS08895 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain S100333_RS08895 SM00437 Bacterial DNA topoisomerase I DNA-binding domain S100333_RS08895 SM00493 S100333_RS08895 S100333_RS08915 SM00382 ATPases associated with a variety of cellular activities S100333_RS08915 SM01086 C-terminal, D2-small domain, of ClpB protein S100333_RS08955 SM00382 ATPases associated with a variety of cellular activities S100333_RS09005 SM00448 cheY-homologous receiver domain S100333_RS09040 SM00962 SRP54-type protein, GTPase domain S100333_RS09050 SM00448 cheY-homologous receiver domain S100333_RS09055 SM00073 Histidine Phosphotransfer domain S100333_RS09055 SM00260 Two component signalling adaptor domain S100333_RS09055 SM00387 Histidine kinase-like ATPases S100333_RS09055 SM01231 S100333_RS09055 S100333_RS09060 SM00260 Two component signalling adaptor domain S100333_RS09120 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S100333_RS09130 SM00479 S100333_RS09130 S100333_RS09130 SM00481 DNA polymerase alpha chain like domain S100333_RS09140 SM00316 Ribosomal protein S1-like RNA-binding domain S100333_RS09140 SM00322 K homology RNA-binding domain S100333_RS09175 SM00904 Riboflavin kinase S100333_RS09180 SM01387 S100333_RS09180 S100333_RS09185 SM00316 Ribosomal protein S1-like RNA-binding domain S100333_RS09185 SM00322 K homology RNA-binding domain S100333_RS09215 SM00859 Semialdehyde dehydrogenase, NAD binding domain S100333_RS09225 SM01130 S100333_RS09225 S100333_RS09230 SM00849 Metallo-beta-lactamase superfamily S100333_RS09245 SM00382 ATPases associated with a variety of cellular activities S100333_RS09245 SM00843 S100333_RS09245 S100333_RS09250 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS09250 SM00866 S100333_RS09250 S100333_RS09285 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS09295 SM00852 Probable molybdopterin binding domain S100333_RS09300 SM00382 ATPases associated with a variety of cellular activities S100333_RS09310 SM00322 K homology RNA-binding domain S100333_RS09310 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S100333_RS09325 SM00829 Enoylreductase S100333_RS09335 SM00729 Elongator protein 3, MiaB family, Radical SAM S100333_RS09350 SM00533 DNA-binding domain of DNA mismatch repair MUTS family S100333_RS09350 SM00534 ATPase domain of DNA mismatch repair MUTS family S100333_RS09355 SM00853 MutL C terminal dimerisation domain S100333_RS09355 SM01340 S100333_RS09355 S100333_RS09380 SM00849 Metallo-beta-lactamase superfamily S100333_RS09465 SM00646 S100333_RS09465 S100333_RS09475 SM00382 ATPases associated with a variety of cellular activities S100333_RS09490 SM00422 helix_turn_helix, mercury resistance S100333_RS09495 SM01230 S100333_RS09495 S100333_RS09510 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS09515 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS09560 SM00885 D5 N terminal like S100333_RS09570 SM00891 ERCC4 domain S100333_RS09625 SM00507 HNH nucleases S100333_RS09705 SM00047 Lysozyme subfamily 2 S100333_RS09740 SM00257 Lysin motif S100333_RS09740 SM00644 S100333_RS09740 S100333_RS09745 SM00860 SMI1 / KNR4 family S100333_RS09790 SM00860 SMI1 / KNR4 family S100333_RS09890 SM00318 Staphylococcal nuclease homologues S100333_RS09900 SM01005 Alanine racemase, C-terminal domain S100333_RS10040 SM00257 Lysin motif S100333_RS10045 SM00857 Resolvase, N terminal domain S100333_RS10055 SM00861 Transketolase, pyrimidine binding domain S100333_RS10080 SM00448 cheY-homologous receiver domain S100333_RS10150 SM01207 S100333_RS10150 S100333_RS10155 SM00881 CoA binding domain S100333_RS10160 SM00387 Histidine kinase-like ATPases S100333_RS10160 SM00433 TopoisomeraseII S100333_RS10165 SM00434 DNA Topoisomerase IV S100333_RS10180 SM01067 Cellulose binding domain S100333_RS10240 SM00878 Biotin carboxylase C-terminal domain S100333_RS10275 SM00823 Phosphopantetheine attachment site S100333_RS10325 SM00829 Enoylreductase S100333_RS10345 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase S100333_RS10360 SM00822 S100333_RS10360 S100333_RS10390 SM00382 ATPases associated with a variety of cellular activities S100333_RS10395 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS10415 SM00155 Phospholipase D. Active site motifs. S100333_RS10645 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS10775 SM00028 Tetratricopeptide repeats S100333_RS10840 SM00860 SMI1 / KNR4 family S100333_RS10845 SM00860 SMI1 / KNR4 family S100333_RS10850 SM00860 SMI1 / KNR4 family S100333_RS10860 SM00860 SMI1 / KNR4 family S100333_RS10875 SM00342 helix_turn_helix, arabinose operon control protein S100333_RS10890 SM00849 Metallo-beta-lactamase superfamily S100333_RS10895 SM00871 Bacterial transcription activator, effector binding domain S100333_RS10910 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S100333_RS10950 SM00421 helix_turn_helix, Lux Regulon S100333_RS10950 SM00448 cheY-homologous receiver domain S100333_RS10955 SM00257 Lysin motif S100333_RS10960 SM00341 Helicase and RNase D C-terminal S100333_RS10960 SM00487 DEAD-like helicases superfamily S100333_RS10960 SM00490 helicase superfamily c-terminal domain S100333_RS10960 SM00956 S100333_RS10960 S100333_RS11050 SM00861 Transketolase, pyrimidine binding domain S100333_RS11055 SM00327 von Willebrand factor (vWF) type A domain S100333_RS11060 SM00382 ATPases associated with a variety of cellular activities S100333_RS11070 SM00257 Lysin motif S100333_RS11165 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S100333_RS11165 SM00245 tail specific protease S100333_RS11200 SM00014 Acid phosphatase homologues S100333_RS11250 SM00882 Coenzyme A transferase S100333_RS11255 SM00882 Coenzyme A transferase S100333_RS11315 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS11355 SM00382 ATPases associated with a variety of cellular activities S100333_RS11400 SM00567 E-Z type HEAT repeats S100333_RS11400 SM00932 Scaffold protein Nfu/NifU N terminal S100333_RS11405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S100333_RS11425 SM00357 Cold shock protein domain S100333_RS11465 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs S100333_RS11465 SM00475 5'-3' exonuclease S100333_RS11525 SM00354 helix_turn _helix lactose operon repressor S100333_RS11540 SM00491 S100333_RS11540 S100333_RS11555 SM00981 S100333_RS11555 S100333_RS11585 SM00487 DEAD-like helicases superfamily S100333_RS11585 SM00490 helicase superfamily c-terminal domain S100333_RS11645 SM00478 endonuclease III S100333_RS11645 SM00525 S100333_RS11645 S100333_RS11675 SM00479 S100333_RS11675 S100333_RS11675 SM00487 DEAD-like helicases superfamily S100333_RS11675 SM00491 S100333_RS11675 S100333_RS11715 SM00851 MGS-like domain S100333_RS11765 SM00914 S100333_RS11765 S100333_RS11770 SM00028 Tetratricopeptide repeats S100333_RS11835 SM00138 Methyltransferase, chemotaxis proteins S100333_RS11840 SM00562 S100333_RS11840 S100333_RS11870 SM00411 bacterial (prokaryotic) histone like domain S100333_RS11925 SM01240 S100333_RS11925 S100333_RS11930 SM00316 Ribosomal protein S1-like RNA-binding domain S100333_RS11970 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase S100333_RS11990 SM00257 Lysin motif S100333_RS12000 SM00487 DEAD-like helicases superfamily S100333_RS12000 SM00490 helicase superfamily c-terminal domain S100333_RS12040 SM00091 PAS domain S100333_RS12040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_RS12040 SM00387 Histidine kinase-like ATPases S100333_RS12040 SM00388 His Kinase A (phosphoacceptor) domain S100333_RS12045 SM00448 cheY-homologous receiver domain S100333_RS12045 SM00862 Transcriptional regulatory protein, C terminal S100333_RS12065 SM00363 S4 RNA-binding domain S100333_RS12080 SM00936 Penicillin-binding protein 5, C-terminal domain S100333_RS12175 SM00477 DNA/RNA non-specific endonuclease S100333_RS12175 SM00892 DNA/RNA non-specific endonuclease S100333_RS12185 SM00645 Papain family cysteine protease S100333_RS12210 SM00028 Tetratricopeptide repeats S100333_RS12220 SM00860 SMI1 / KNR4 family S100333_RS12340 SM00387 Histidine kinase-like ATPases S100333_RS12350 SM00936 Penicillin-binding protein 5, C-terminal domain S100333_RS12390 SM00919 Malic enzyme, NAD binding domain S100333_RS12390 SM01274 S100333_RS12390 S100333_RS12405 SM00870 S100333_RS12405 S100333_RS12410 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS12515 SM00849 Metallo-beta-lactamase superfamily S100333_RS12545 SM00849 Metallo-beta-lactamase superfamily S100333_RS12555 SM01350 S100333_RS12555 S100333_RS12605 SM00382 ATPases associated with a variety of cellular activities S100333_RS12615 SM00062 Bacterial periplasmic substrate-binding proteins S100333_RS12615 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. S100333_RS12625 SM00046 Diacylglycerol kinase catalytic domain (presumed) S100333_RS12635 SM00422 helix_turn_helix, mercury resistance S100333_RS12645 SM00861 Transketolase, pyrimidine binding domain S100333_RS12665 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase S100333_RS12675 SM00091 PAS domain S100333_RS12675 SM00382 ATPases associated with a variety of cellular activities S100333_RS12720 SM00646 S100333_RS12720 S100333_RS12735 SM00448 cheY-homologous receiver domain S100333_RS12745 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S100333_RS12760 SM00363 S4 RNA-binding domain S100333_RS12765 SM00861 Transketolase, pyrimidine binding domain S100333_RS12800 SM00878 Biotin carboxylase C-terminal domain S100333_RS12850 SM00382 ATPases associated with a variety of cellular activities S100333_RS12860 SM00841 Elongation factor P, C-terminal S100333_RS12860 SM01185 S100333_RS12860 S100333_RS12895 SM00529 Helix-turn-helix diphteria tox regulatory element S100333_RS12905 SM00450 Rhodanese Homology Domain S100333_RS12925 SM00487 DEAD-like helicases superfamily S100333_RS12925 SM00490 helicase superfamily c-terminal domain S100333_RS12940 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS13000 SM00382 ATPases associated with a variety of cellular activities S100333_RS13015 SM01091 Transporter associated domain S100333_RS13040 SM00849 Metallo-beta-lactamase superfamily S100333_RS13060 SM00631 S100333_RS13060 S100333_RS13080 SM00028 Tetratricopeptide repeats S100333_RS13120 SM00382 ATPases associated with a variety of cellular activities S100333_RS13125 SM00382 ATPases associated with a variety of cellular activities S100333_RS13170 SM00257 Lysin motif S100333_RS13205 SM00518 AP endonuclease family 2 S100333_RS13210 SM00487 DEAD-like helicases superfamily S100333_RS13210 SM00490 helicase superfamily c-terminal domain S100333_RS13250 SM00400 zinc finger S100333_RS13250 SM00493 S100333_RS13250 S100333_RS13265 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_RS13310 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S100333_RS13360 SM00729 Elongator protein 3, MiaB family, Radical SAM S100333_RS13375 SM00271 DnaJ molecular chaperone homology domain S100333_RS13395 SM00729 Elongator protein 3, MiaB family, Radical SAM S100333_RS13400 SM00838 Elongation factor G C-terminus S100333_RS13435 SM00849 Metallo-beta-lactamase superfamily S100333_RS13445 SM00278 Helix-hairpin-helix DNA-binding motif class 1 S100333_RS13465 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S100333_RS13475 SM01103 S100333_RS13475 S100333_RS13505 SM00644 S100333_RS13505 S100333_RS13515 SM01350 S100333_RS13515 S100333_RS13560 SM00028 Tetratricopeptide repeats S100333_RS13575 SM00860 SMI1 / KNR4 family S100333_RS13580 SM00860 SMI1 / KNR4 family S100333_RS13620 SM00382 ATPases associated with a variety of cellular activities S100333_RS13680 SM00422 helix_turn_helix, mercury resistance S100333_RS13700 SM01091 Transporter associated domain S100333_RS13750 SM00344 helix_turn_helix ASNC type S100333_RS13850 SM00287 Bacterial SH3 domain homologues S100333_RS13890 SM00422 helix_turn_helix, mercury resistance S100333_RS13900 SM00829 Enoylreductase S100333_RS13910 SM00640 Glycosyl hydrolases family 32 S100333_RS13935 SM00382 ATPases associated with a variety of cellular activities S100333_RS14005 SM00926 Molybdopterin oxidoreductase Fe4S4 domain S100333_RS14005 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region S100333_RS14035 SM00650 Ribosomal RNA adenine dimethylases S100333_RS14090 SM00732 Likely ribonuclease with RNase H fold. S100333_RS14100 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain S100333_RS14110 SM00382 ATPases associated with a variety of cellular activities S100333_RS14115 SM00062 Bacterial periplasmic substrate-binding proteins S100333_RS14115 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. S100333_RS14145 SM00382 ATPases associated with a variety of cellular activities S100333_RS14150 SM00028 Tetratricopeptide repeats S100333_RS14170 SM00382 ATPases associated with a variety of cellular activities S100333_RS14200 SM00287 Bacterial SH3 domain homologues S100333_RS14200 SM00646 S100333_RS14200 S100333_RS14210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S100333_RS14210 SM00954 Region found in RelA / SpoT proteins S100333_RS14260 SM01323 S100333_RS14260 S100333_RS14280 SM00382 ATPases associated with a variety of cellular activities S100333_RS14285 SM00278 Helix-hairpin-helix DNA-binding motif class 1 S100333_RS14335 SM00257 Lysin motif S100333_RS14380 SM01317 S100333_RS14380 S100333_RS14475 SM00257 Lysin motif S100333_RS14485 SM01004 Delta-aminolevulinic acid dehydratase S100333_RS14520 SM00382 ATPases associated with a variety of cellular activities S100333_RS14520 SM00464 Found in ATP-dependent protease La (LON) S100333_RS14530 SM00382 ATPases associated with a variety of cellular activities S100333_RS14530 SM00994 ClpX C4-type zinc finger S100333_RS14530 SM01086 C-terminal, D2-small domain, of ClpB protein S100333_RS14555 SM01329 S100333_RS14555 S100333_RS14560 SM00917 LeuA allosteric (dimerisation) domain S100333_RS14620 SM00487 DEAD-like helicases superfamily S100333_RS14620 SM00490 helicase superfamily c-terminal domain S100333_RS14660 SM00909 Sporulation and spore germination S100333_RS14670 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS14675 SM00421 helix_turn_helix, Lux Regulon S100333_RS14715 SM00465 GIY-YIG type nucleases (URI domain) S100333_RS14725 SM00813 Alpha-L-arabinofuranosidase C-terminus S100333_RS14730 SM00893 Electron transfer flavoprotein domain S100333_RS14735 SM00893 Electron transfer flavoprotein domain S100333_RS14760 SM00463 Small MutS-related domain S100333_RS14760 SM00533 DNA-binding domain of DNA mismatch repair MUTS family S100333_RS14760 SM00534 ATPase domain of DNA mismatch repair MUTS family S100333_RS14765 SM00278 Helix-hairpin-helix DNA-binding motif class 1 S100333_RS14765 SM00481 DNA polymerase alpha chain like domain S100333_RS14765 SM00483 DNA polymerase X family S100333_RS14785 SM00873 B3/4 domain S100333_RS14785 SM00874 tRNA synthetase B5 domain S100333_RS14785 SM00896 Ferredoxin-fold anticodon binding domain S100333_RS14800 SM00967 RNA 2'-O ribose methyltransferase substrate binding S100333_RS14835 SM00813 Alpha-L-arabinofuranosidase C-terminus S100333_RS14865 SM01007 Class II Aldolase and Adducin N-terminal domain S100333_RS14930 SM00448 cheY-homologous receiver domain S100333_RS14930 SM00850 LytTr DNA-binding domain S100333_RS14935 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. S100333_RS14935 SM00387 Histidine kinase-like ATPases S100333_RS14945 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain S100333_RS14960 SM00382 ATPases associated with a variety of cellular activities S100333_RS14980 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain S100333_RS15010 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain S100333_RS15010 SM01232 S100333_RS15010 S100333_RS15015 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs S100333_RS15015 SM00474 3'-5' exonuclease S100333_RS15015 SM00475 5'-3' exonuclease S100333_RS15015 SM00482 DNA polymerase A domain S100333_RS15025 SM00448 cheY-homologous receiver domain S100333_RS15025 SM00862 Transcriptional regulatory protein, C terminal S100333_RS15035 SM01329 S100333_RS15035 S100333_RS15080 SM00919 Malic enzyme, NAD binding domain S100333_RS15080 SM01274 S100333_RS15080 S100333_RS15085 SM00481 DNA polymerase alpha chain like domain S100333_RS15115 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_RS15120 SM00849 Metallo-beta-lactamase superfamily S100333_RS15145 SM00852 Probable molybdopterin binding domain S100333_RS15210 SM00981 S100333_RS15210 S100333_RS15240 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. S100333_RS15260 SM00363 S4 RNA-binding domain S100333_RS15260 SM01390 S100333_RS15260 S100333_RS15265 SM00363 S4 RNA-binding domain S100333_RS15285 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_RS15305 SM00354 helix_turn _helix lactose operon repressor S100333_RS15310 SM00830 Chorismate mutase type II S100333_RS15335 SM00382 ATPases associated with a variety of cellular activities S100333_RS15335 SM00843 S100333_RS15335 S100333_RS15370 SM00919 Malic enzyme, NAD binding domain S100333_RS15370 SM01274 S100333_RS15370 S100333_RS15375 SM00849 Metallo-beta-lactamase superfamily S100333_RS15395 SM00642 Alpha-amylase domain S100333_RS15435 SM00382 ATPases associated with a variety of cellular activities S100333_RS15440 SM00420 helix_turn_helix, Deoxyribose operon repressor S100333_RS15445 SM00363 S4 RNA-binding domain S100333_RS15495 SM00342 helix_turn_helix, arabinose operon control protein S100333_RS15520 SM00729 Elongator protein 3, MiaB family, Radical SAM S100333_RS15520 SM00876 Biotin and Thiamin Synthesis associated domain S100333_RS15550 SM00354 helix_turn _helix lactose operon repressor S100333_RS15575 SM00450 Rhodanese Homology Domain S100333_RS15590 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) S100333_RS15590 SM00091 PAS domain S100333_RS15610 SM00382 ATPases associated with a variety of cellular activities S100333_RS15615 SM00387 Histidine kinase-like ATPases S100333_RS15620 SM00448 cheY-homologous receiver domain S100333_RS15620 SM00862 Transcriptional regulatory protein, C terminal S100333_RS15630 SM00382 ATPases associated with a variety of cellular activities S100333_RS15645 SM00382 ATPases associated with a variety of cellular activities S100333_RS15650 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS15660 SM00729 Elongator protein 3, MiaB family, Radical SAM S100333_RS15720 SM00382 ATPases associated with a variety of cellular activities S100333_RS15760 SM01234 S100333_RS15760 S100333_RS15765 SM00947 Carbonic anhydrase S100333_RS15800 SM00382 ATPases associated with a variety of cellular activities S100333_RS15810 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain S100333_RS15850 SM00984 UDP binding domain S100333_RS15910 SM00642 Alpha-amylase domain S100333_RS16045 SM00244 prohibitin homologues S100333_RS16110 SM00047 Lysozyme subfamily 2 S100333_RS16160 SM00420 helix_turn_helix, Deoxyribose operon repressor S100333_RS16160 SM01134 S100333_RS16160 S100333_RS16165 SM01007 Class II Aldolase and Adducin N-terminal domain S100333_RS16180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S100333_RS16180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_RS16180 SM00319 Homologues of the ligand binding domain of Tar S100333_RS16185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S100333_RS16185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_RS16185 SM00319 Homologues of the ligand binding domain of Tar S100333_RS16210 SM00642 Alpha-amylase domain S100333_RS16215 SM01091 Transporter associated domain S100333_RS16270 SM00316 Ribosomal protein S1-like RNA-binding domain S100333_RS16280 SM00344 helix_turn_helix ASNC type S100333_RS16300 SM00387 Histidine kinase-like ATPases S100333_RS16300 SM00388 His Kinase A (phosphoacceptor) domain S100333_RS16305 SM01298 S100333_RS16305 S100333_RS16310 SM00479 S100333_RS16310 S100333_RS16340 SM00091 PAS domain S100333_RS16340 SM00387 Histidine kinase-like ATPases S100333_RS16345 SM00448 cheY-homologous receiver domain S100333_RS16355 SM00382 ATPases associated with a variety of cellular activities S100333_RS16420 SM00421 helix_turn_helix, Lux Regulon S100333_RS16420 SM00448 cheY-homologous receiver domain S100333_RS16425 SM00387 Histidine kinase-like ATPases S100333_RS16450 SM00052 Putative diguanylate phosphodiesterase S100333_RS16495 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S100333_RS16545 SM01002 Alanine dehydrogenase/PNT, C-terminal domain S100333_RS16545 SM01003 Alanine dehydrogenase/PNT, N-terminal domain S100333_RS16555 SM00923 MbtH-like protein S100333_RS16560 SM00823 Phosphopantetheine attachment site S100333_RS16560 SM00824 Thioesterase S100333_RS16645 SM01240 S100333_RS16645 S100333_RS16745 SM00729 Elongator protein 3, MiaB family, Radical SAM S100333_RS16830 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain S100333_RS16865 SM00382 ATPases associated with a variety of cellular activities S100333_RS16870 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS16870 SM00866 S100333_RS16870 S100333_RS16900 SM00465 GIY-YIG type nucleases (URI domain) S100333_RS16930 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S100333_RS16955 SM00382 ATPases associated with a variety of cellular activities S100333_RS16985 SM00382 ATPases associated with a variety of cellular activities S100333_RS16985 SM00930 S100333_RS16985 S100333_RS17000 SM00493 S100333_RS17000 S100333_RS17055 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS17085 SM00382 ATPases associated with a variety of cellular activities S100333_RS17110 SM00382 ATPases associated with a variety of cellular activities S100333_RS17130 SM00382 ATPases associated with a variety of cellular activities S100333_RS17185 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S100333_RS17190 SM00448 cheY-homologous receiver domain S100333_RS17190 SM00862 Transcriptional regulatory protein, C terminal S100333_RS17195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_RS17195 SM00387 Histidine kinase-like ATPases S100333_RS17195 SM00388 His Kinase A (phosphoacceptor) domain S100333_RS17235 SM00421 helix_turn_helix, Lux Regulon S100333_RS17235 SM00448 cheY-homologous receiver domain S100333_RS17240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_RS17240 SM00387 Histidine kinase-like ATPases S100333_RS17275 SM00382 ATPases associated with a variety of cellular activities S100333_RS17305 SM00387 Histidine kinase-like ATPases S100333_RS17305 SM00388 His Kinase A (phosphoacceptor) domain S100333_RS17310 SM00448 cheY-homologous receiver domain S100333_RS17310 SM00862 Transcriptional regulatory protein, C terminal S100333_RS17330 SM00835 Cupin S100333_RS17345 SM00382 ATPases associated with a variety of cellular activities S100333_RS17355 SM00382 ATPases associated with a variety of cellular activities S100333_RS17540 SM00257 Lysin motif S100333_RS17540 SM00644 S100333_RS17540 S100333_RS17570 SM00047 Lysozyme subfamily 2 S100333_RS17665 SM00507 HNH nucleases S100333_RS17775 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS17780 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS17785 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS17810 SM00316 Ribosomal protein S1-like RNA-binding domain S100333_RS17810 SM00357 Cold shock protein domain S100333_RS17810 SM00955 S100333_RS17810 S100333_RS17830 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS17835 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS17840 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS17850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). S100333_RS17850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_RS17900 SM00116 Domain in cystathionine beta-synthase and other proteins. S100333_RS17900 SM00382 ATPases associated with a variety of cellular activities S100333_RS17935 SM01192 S100333_RS17935 S100333_RS17935 SM01193 S100333_RS17935 S100333_RS17955 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain S100333_RS17970 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS18020 SM00421 helix_turn_helix, Lux Regulon S100333_RS18020 SM00448 cheY-homologous receiver domain S100333_RS18035 SM00382 ATPases associated with a variety of cellular activities S100333_RS18060 SM00331 Sigma factor PP2C-like phosphatases S100333_RS18090 SM00354 helix_turn _helix lactose operon repressor S100333_RS18095 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS18095 SM00895 S100333_RS18095 S100333_RS18190 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS18235 SM00640 Glycosyl hydrolases family 32 S100333_RS18280 SM00642 Alpha-amylase domain S100333_RS18305 SM00642 Alpha-amylase domain S100333_RS18310 SM00354 helix_turn _helix lactose operon repressor S100333_RS18330 SM00947 Carbonic anhydrase S100333_RS18345 SM00382 ATPases associated with a variety of cellular activities S100333_RS18350 SM00387 Histidine kinase-like ATPases S100333_RS18355 SM00448 cheY-homologous receiver domain S100333_RS18355 SM00862 Transcriptional regulatory protein, C terminal S100333_RS18405 SM00028 Tetratricopeptide repeats S100333_RS18410 SM00382 ATPases associated with a variety of cellular activities S100333_RS18520 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS18520 SM00866 S100333_RS18520 S100333_RS18560 SM00382 ATPases associated with a variety of cellular activities S100333_RS18565 SM00487 DEAD-like helicases superfamily S100333_RS18565 SM00490 helicase superfamily c-terminal domain S100333_RS18590 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S100333_RS18600 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S100333_RS18600 SM00245 tail specific protease S100333_RS18610 SM00382 ATPases associated with a variety of cellular activities S100333_RS18630 SM00957 SecA DEAD-like domain S100333_RS18630 SM00958 SecA preprotein cross-linking domain S100333_RS18725 SM00487 DEAD-like helicases superfamily S100333_RS18725 SM00490 helicase superfamily c-terminal domain S100333_RS18735 SM00421 helix_turn_helix, Lux Regulon S100333_RS18735 SM00448 cheY-homologous receiver domain S100333_RS18740 SM00387 Histidine kinase-like ATPases S100333_RS18785 SM00382 ATPases associated with a variety of cellular activities S100333_RS18825 SM00984 UDP binding domain S100333_RS18845 SM00646 S100333_RS18845 S100333_RS18880 SM00382 ATPases associated with a variety of cellular activities S100333_RS18925 SM00047 Lysozyme subfamily 2 S100333_RS18925 SM00287 Bacterial SH3 domain homologues S100333_RS18975 SM00854 Bacterial capsule synthesis protein PGA_cap S100333_RS18995 SM00354 helix_turn _helix lactose operon repressor S100333_RS19010 SM00382 ATPases associated with a variety of cellular activities S100333_RS19025 SM00287 Bacterial SH3 domain homologues S100333_RS19080 SM00903 Flavin reductase like domain S100333_RS19095 SM00344 helix_turn_helix ASNC type S100333_RS19170 SM00984 UDP binding domain S100333_RS19200 SM00487 DEAD-like helicases superfamily S100333_RS19200 SM00490 helicase superfamily c-terminal domain S100333_RS19215 SM00420 helix_turn_helix, Deoxyribose operon repressor S100333_RS19215 SM01134 S100333_RS19215 S100333_RS19240 SM00387 Histidine kinase-like ATPases S100333_RS19255 SM00028 Tetratricopeptide repeats S100333_RS19285 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS19295 SM00710 Parallel beta-helix repeats S100333_RS19295 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses S100333_RS19325 SM00938 Nitrogen regulatory protein P-II S100333_RS19330 SM00014 Acid phosphatase homologues S100333_RS19365 SM00155 Phospholipase D. Active site motifs. S100333_RS19370 SM00422 helix_turn_helix, mercury resistance S100333_RS19425 SM00028 Tetratricopeptide repeats S100333_RS19435 SM00729 Elongator protein 3, MiaB family, Radical SAM S100333_RS19450 SM00327 von Willebrand factor (vWF) type A domain S100333_RS19460 SM00327 von Willebrand factor (vWF) type A domain S100333_RS19495 SM00382 ATPases associated with a variety of cellular activities S100333_RS19555 SM00226 Low molecular weight phosphatase family S100333_RS19595 SM00937 S100333_RS19595 S100333_RS19615 SM00919 Malic enzyme, NAD binding domain S100333_RS19615 SM01274 S100333_RS19615 S100333_RS19630 SM00357 Cold shock protein domain S100333_RS19630 SM00382 ATPases associated with a variety of cellular activities S100333_RS19630 SM00959 Rho termination factor, N-terminal domain S100333_RS19655 SM00448 cheY-homologous receiver domain S100333_RS19690 SM00155 Phospholipase D. Active site motifs. S100333_RS19710 SM00836 DALR anticodon binding domain S100333_RS19710 SM01016 Arginyl tRNA synthetase N terminal dom S100333_RS19730 SM00729 Elongator protein 3, MiaB family, Radical SAM S100333_RS19780 SM00028 Tetratricopeptide repeats S100333_RS19830 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS19835 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain S100333_RS19855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. S100333_RS19920 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase S100333_RS19960 SM00858 S100333_RS19960 S100333_RS20015 SM00986 Uracil DNA glycosylase superfamily S100333_RS20015 SM00987 UreE urease accessory protein, C-terminal domain S100333_RS20035 SM00640 Glycosyl hydrolases family 32 S100333_RS20050 SM01061 CAT RNA binding domain S100333_RS20205 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase S100333_RS20235 SM01061 CAT RNA binding domain S100333_RS20250 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS20255 SM00363 S4 RNA-binding domain S100333_RS20265 SM00954 Region found in RelA / SpoT proteins S100333_RS20355 SM01060 S100333_RS20355 S100333_RS20370 SM00382 ATPases associated with a variety of cellular activities S100333_RS20405 SM00382 ATPases associated with a variety of cellular activities S100333_RS20410 SM00382 ATPases associated with a variety of cellular activities S100333_RS20445 SM00382 ATPases associated with a variety of cellular activities S100333_RS20485 SM00421 helix_turn_helix, Lux Regulon S100333_RS20485 SM00448 cheY-homologous receiver domain S100333_RS20520 SM00882 Coenzyme A transferase S100333_RS20525 SM00882 Coenzyme A transferase S100333_RS20555 SM01060 S100333_RS20555 S100333_RS20570 SM01061 CAT RNA binding domain S100333_RS20590 SM00487 DEAD-like helicases superfamily S100333_RS20590 SM00490 helicase superfamily c-terminal domain S100333_RS20725 SM00860 SMI1 / KNR4 family S100333_RS20770 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain S100333_RS20780 SM01133 S100333_RS20780 S100333_RS20810 SM00382 ATPases associated with a variety of cellular activities S100333_RS20820 SM00062 Bacterial periplasmic substrate-binding proteins S100333_RS20885 SM00382 ATPases associated with a variety of cellular activities S100333_RS20890 SM00387 Histidine kinase-like ATPases S100333_RS20895 SM00448 cheY-homologous receiver domain S100333_RS20895 SM00862 Transcriptional regulatory protein, C terminal S100333_RS20950 SM00420 helix_turn_helix, Deoxyribose operon repressor S100333_RS20950 SM01134 S100333_RS20950 S100333_RS20975 SM00387 Histidine kinase-like ATPases S100333_RS20990 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS21020 SM00382 ATPases associated with a variety of cellular activities S100333_RS21060 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS21085 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS21085 SM00895 S100333_RS21085 S100333_RS21100 SM01350 S100333_RS21100 S100333_RS21125 SM00345 helix_turn_helix gluconate operon transcriptional repressor S100333_RS21125 SM00866 S100333_RS21125 S100333_RS21135 SM00382 ATPases associated with a variety of cellular activities S100333_RS21170 SM00382 ATPases associated with a variety of cellular activities S100333_RS21225 SM00487 DEAD-like helicases superfamily S100333_RS21225 SM00490 helicase superfamily c-terminal domain S100333_RS21310 SM00752 Horizontally Transferred TransMembrane Domain S100333_RS21325 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor S100333_RS21340 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. S100333_RS21345 SM00849 Metallo-beta-lactamase superfamily S100333_RS21360 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) S100333_RS21360 SM00091 PAS domain S100333_RS21360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain S100333_RS21360 SM00387 Histidine kinase-like ATPases S100333_RS21360 SM00388 His Kinase A (phosphoacceptor) domain S100333_RS21365 SM00448 cheY-homologous receiver domain S100333_RS21365 SM00862 Transcriptional regulatory protein, C terminal S100333_RS21390 SM00788 Adenylosuccinate synthetase S100333_RS21400 SM00382 ATPases associated with a variety of cellular activities S100333_RS21435 SM00267 diguanylate cyclase S100333_RS21460 SM01131 S100333_RS21460 S100333_RS21480 SM00422 helix_turn_helix, mercury resistance S100333_RS21510 SM00347 helix_turn_helix multiple antibiotic resistance protein S100333_RS21545 SM00871 Bacterial transcription activator, effector binding domain S100333_RS21575 SM00382 ATPases associated with a variety of cellular activities S100333_RS21585 SM00354 helix_turn _helix lactose operon repressor S100333_RS21615 SM00926 Molybdopterin oxidoreductase Fe4S4 domain S100333_RS21635 SM00470 ParB-like nuclease domain S100333_RS21650 SM00470 ParB-like nuclease domain S100333_RS21660 SM01228 S100333_RS21660 S100333_RS21670 SM00322 K homology RNA-binding domain S100333_RS21670 SM00393 Putative single-stranded nucleic acids-binding domain S100333_RS21670 SM01245 S100333_RS21670 S100333_RS21755 SM00530 Helix-turn-helix XRE-family like proteins S100333_RS22000 SM00318 Staphylococcal nuclease homologues S100333_RS22170 SM00530 Helix-turn-helix XRE-family like proteins