        rlbA NONE
        recF NONE
        remB NONE
        gyrB    6584 ..    6609 + -10.6  -5.24129   ATCTAATCATAAAAA         GCCTTATTTC CAATAA GAAATAAGGC          TTTTTTCTGAACAAG 100 35
        gyrA    9257 ..    9277 + -13.3  -5.39721   GAAGTGTGAGAAAAA            GCGCAGCTG AAA TAGCTGCGC            TTTTTTGTGTCATAA 100 32
HC659_RS00040   11226 ..   11238 +  -7.7  -3.09933   TTGTTTAGTTTTGAA                GGAAC TTT GTTCC                TTGAATAAGTTAAGA  65 96
HC659_RS00045 NONE
HC659_RS00050   11478 ..   11488 +  -5.4  -4.42235   TAGTAACACAAGATA                 TCAC ATA GTGA                 TTCTTTTTAACGGTT  70 85
HC659_RS00055   14461 ..   14478 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf   14608 ..   14626 + -14.6  -5.80003   CCAAGCAAGCTTAAA             CCCAGCTC AAT GAGCTGGG             TTTTTTGTTTGTTAA 100 35
        guaB   17197 ..   17221 +  -9.3   -5.9873   ACAAATTAAAAACAT          TTGACAGGGTC TCT GACTCTGTCTA          TTTTTTTTATACTGA 100 50
HC659_RS00075   18667 ..   18690 +    -6  -3.63068   TTTAATCAATTGAAA          GAGCTCTGAT GGAT GTTAGGGCTC           TTTCGCGTAATATAC  61 36
        pdxS NONE
        pdxT   20598 ..   20629 + -15.2  -5.48213   AGGGTGGCAACGCGA      GAGCTCTCGTCCCT TTAT GGGGATGAGGGCTC       TTTTTATTTTCGATA 100 274
        serS   21959 ..   21980 + -10.1  -4.96646   CGTAAATTATGGAAA           GGCGTGCCT GACA AGGTGCGCC            TTTTTGCTTATGTAA 100 36
HC659_RS00095   22226 ..   22248 +  -8.4  -5.79595   TTGGAGATTGTTTTG           TCCGTTGCAT TCG GTGCGGCGGA           TTTTTTATTTTAAAG 100 76
HC659_RS00120 NONE
         ffs   26498 ..   26517 + -10.8  -5.60689   CATCAAATTTTCAGA            CTCACCTA ATAT TAGGTGAG             TTTTTTGTTATGTAA 100 50
        dnaX NONE
HC659_RS00135 NONE
        recR NONE
HC659_RS00145 NONE
        bofA   29877 ..   29892 +  -3.2  -5.00616   ATTCTAATATACGTC              GCTGAT GACG AACAGC               TTTTTTGAAAAGAAA  70 78
HC659_RS00155   31693 ..   31705 +  -7.7  -3.09933   TTGTTTAGTTTTGAA                GGAAC TTT GTTCC                TTGAATAAGTTAAGA  65 96
HC659_RS00160 NONE
HC659_RS00165   31945 ..   31955 +  -5.4  -4.42235   TAGTAACACAAGATA                 TCAC ATA GTGA                 TTCTTTTTAACGGTT  70 85
HC659_RS00170   34928 ..   34945 +  -8.5  -4.49556   ATCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf   35075 ..   35093 + -14.6  -5.68438   CCAAGCAAGTTTAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTGTTTACTCA 100 35
        csfB   35438 ..   35451 +  -6.7  -5.70829   GCCATTATATTCATA               GACCT GAAA AGGTC                TTTTTTTGTACTCTT  93 25
HC659_RS00185 NONE
HC659_RS00190   37355 ..   37367 +  -4.8  -2.89511   AAGGAAAGATAGTTA                CCAG TAAGT CTGG                CTTTAAGTTCTGTCA  50 29
HC659_RS00195 NONE
HC659_RS00200   39490 ..   39504 +  -2.9  -3.38218   GTGATCGATGAAGCG               TTGAA AAAAA TTCAA               TTGTGACCTGTTTCC  46 5
        darA   39891 ..   39907 +  -3.7  -4.13014   TATTTGTCCTTCCAG              TCGATGA ATT TCATCAA              TTTTAAGGATCTGAA  58 3
HC659_RS00210 NONE
        holB NONE
        ricT NONE
        yabA   42578 ..   42600 +  -8.4  -4.58663   AAAAAATAGGGAAAA           GGCTTCCG CATAAGA CGGGAGCC           TTTTTCAAAGGTACT  88 32
HC659_RS00230 NONE
HC659_RS00235 NONE
        rsmI   44518 ..   44541 +  -9.7  -5.24129   TAAGCAATAAAAAAA          CGTTCTTGT GTCATA ACAAGAACG           TTTTTTGTACAAGAA 100 31
        metG   47348 ..   47389 + -10.3  -3.34398   TTAAATAATGATAAA CAAAAGGTGTTTCACGTGT AACA ATTCGTCGAACACCTTTTG  TGTTTCGACAAGAAA  80 33
HC659_RS00255   48258 ..   48276 +  -3.8  -3.86524   AGTTCTACATGCTTT             CTTCTCCT CAT AGGATAGG             TTTGTCGACAAGTCT  56 97
HC659_RS00260   49672 ..   49692 +    -9  -5.68023   ATATACTTATGTATT            CAGAGGGT TTTGC GCCCTCTG            TTTTTTTCGTTATAA 100 42
        rnmV NONE
        rsmA   51220 ..   51237 +  -9.9  -5.45802   AACGGATTGTATAAA             GCCCTTT TCTA AAAGGGC              TTTTTGTTTTGCGCA 100 14
        prtG   52276 ..   52298 +  -9.9  -5.80951   ATTAACAGTTGAAAA           CCTGCATAG GAGAG CTATGCGGG           TTTTTTATTTTACAT 100 36
HC659_RS00280   52740 ..   52762 +  -8.5  -5.46706   GTGGCATTTTAACGG           GCAGTGAAC CTTTT GTTTACTGC           TTTTTGTTTTGCCCT 100 29
HC659_RS00285   53091 ..   53113 +  -9.8  -6.09196   CGATAAGGATGTGAC           CCGGGGGACG TGC TGTTCCCTGG           TTTTTTTATTTTGGA 100 35
HC659_RS00290 NONE
        purR NONE
HC659_RS00300   55394 ..   55419 + -11.9  -5.67283   GAAATAATAAGAAAA         GTGATTCTGGG AGAG CCCGGGATCAC          TTTTTTATTTACCTT 100 34
       spoVG   55892 ..   55933 +  -5.3  -5.33848   ATAACCAAAAAGCAA GGACTGCTG--AAAGGGCT GACATA AGCCTTTTGCCGGCGGTCC TTTTTTAATTCTGAT  86 44
        glmU NONE
HC659_RS00315 NONE
HC659_RS00320   59120 ..   59144 +  -7.9  -4.46926   ACAATAATAGCTTAA          GGCGTAACC CTCCCGC GGTTACGTC          TTTTGTGCTAGAATG  82 34
HC659_RS00325 NONE
         fin   60077 ..   60105 +  -8.9   -5.1523   ATTTATTCAATAAAA        AGCTTTGGTGTAG ACA CTAGACCAAAGCG        TTTTTCTGTTCTCGC 100 28
         mfd   63695 ..   63705 +    -4  -3.83205   TTTGTTACTCTCTGG                 TGTA TAT TACA                 TTTGATGTGACGGAT  56 43
       spoVT   64384 ..   64409 +  -9.1   -4.7497   AAATAGGTATGTAAA         GAACAGC-TCTC CTT GGGACGCTGTTC         TTTTTCATGCGTGCC 100 60
HC659_RS00345 NONE
        mazG NONE
HC659_RS00355 NONE
        yabP NONE
        yabQ NONE
       divIC   69271 ..   69288 +  -3.5  -2.90075   GTAGCCTTGTTGACA             CTTAAAT TTTT ATTTAGG              TATAATTAAGCAAAC  44 37
HC659_RS00375   69754 ..   69777 +  -8.9  -5.58179   TATAAAATAAATGAA          GCATCCGTT CATCCC GACGGATGC           TTTTTTATTATCCTC 100 53
HC659_RS00380 NONE
HC659_RS00385   70063 ..   70085 +  -8.5  -5.85011   GGTCATCCTAAAAAA           TCGGTTTCT CTTGC AGAAGCCGA           TTTTTTTCATTTTTA 100 33
      spoIIE   72784 ..   72795 +  -2.2  -3.21276   GGGAATATATGAATC                TGAG AATC CTCG                 TATTCTCCAGGAGGA  43 77
HC659_RS00395 NONE
        prkT   74595 ..   74606 +    -3  -3.61356   GGTTGAAAGTGTTAG                GATA TGAA TATC                 TTTAAAATACCTGCT  48 84
        tilS NONE
         hpt NONE
        ftsH   78630 ..   78649 + -11.4  -5.72616   TTCTTTCTAAAAAAA            CTGCCGGC TGAC GCTGGCAG             TTTTTTTATGTAAAT 100 47
HC659_RS00420 NONE
        hslO   80459 ..   80479 + -11.9  -4.98531   TTCGTGACCAAACTA            CCCGCTAAG CTC TTTAGCGGG            TTTTTAATTTGAGAA 100 18
HC659_RS00430 NONE
        cysK   82421 ..   82438 + -12.7  -5.88197   TAAAAAAAGCCAAAA             CTCCCGG TTCG CCGGGAG              TTTTTTTATATTTCG 100 38
HC659_RS00440 NONE
        pabA NONE
        pabC NONE
        folP NONE
        folB NONE
        folK NONE
HC659_RS00470 NONE
        dusB   88370 ..   88390 +  -5.4  -5.14894   TCTATTTGCTGCTCA            CTGCTAGT TTTAC GCTGGCAG            TTTTTCTGCTTTTTT  81 49
        lysS   89945 ..   89978 + -10.4  -4.68424   AACGCTAATAAAAAA     GAGCGGTATCCT CCATAGGGAA AGGATGCCGCTC      TTTTTAAATCCCTTA  95 33
HC659_RS00485   91863 ..   91888 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
HC659_RS00490   94926 ..   94943 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf   95055 ..   95065 +  -2.4  -3.21235   TGTGAGAGTAGGACG                 CCGC CAA GCAG                 ATTTATTAATTCTAC  43 17
HC659_RS00500   95164 ..   95212 +  -5.1  -3.09516   ATCGGTCGTAGGTTC GAATCCTACCTGCGGAGCCATTG CTT CCATAGCTCAGCAGGTAGAGCAC TTCCATGGTAAGGAA  52 6
HC659_RS00505   95277 ..   95297 +    -4  -5.80364   ATGTATTATTACCAA            GGTTTCTC ATAAG GAGAAAGC            TTTTTTTATTGCGAT  90 42
HC659_RS00510   95392 ..   95406 +    -5  -3.43564   GTCTTCCGCTCCATT               TATCCT AAC GGGATA               TTGTAAATTGAATTG  55 28
HC659_RS00515 NONE
HC659_RS00520 NONE
HC659_RS00525   95839 ..   95855 +  -2.3   -3.8709   CGCACAGCGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  51 179
HC659_RS00530   97472 ..   97497 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
HC659_RS00535  100535 ..  100552 +  -8.5  -4.49556   ATCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf  100682 ..  100700 + -14.6  -5.63645   CCAAGCAAGCTTAAA             CCCAGCTC AAT GAGCTGGG             TTTTTTGTATTTTGG 100 35
        ctsR NONE
        mcsA NONE
HC659_RS00555 NONE
HC659_RS00560  105484 ..  105514 +  -9.9  -2.89602   TATAGAAGACGGAAA       TGAGGCATACA GCATGTAAG TGTATGCCTCA       CTTTCATATCAAGAA  75 41
        radA NONE
        disA NONE
HC659_RS00575 NONE
HC659_RS00580 NONE
HC659_RS00585 NONE
HC659_RS00590  112185 ..  112215 + -14.9   -5.8187   AACCGCGCGGTTAAA      GCGTCTCTGTCATG TTTA CATG-CAGAGACGC       TTTTTTTATTGGGTA 100 248
        cysE NONE
        cysS NONE
HC659_RS00605 NONE
        rlmB NONE
        rae1 NONE
        sigH NONE
        rpmG NONE
        secE  117223 ..  117235 +  -6.9  -5.56673   TATTACTTGCCAAAA                CCCGT TCA GCGGG                TTTTTTATTGTGGCT 100 73
        nusG NONE
        rplK  118494 ..  118523 + -13.7  -3.72027   AATTTGTTTCTTGTC       GGGTTGCGAGTTT TAAC AAGTTCGCAACCC        TTATTCGTGGGAGGT 100 39
        rplA  119424 ..  119444 + -15.5   -4.9792   ATGCTTGTATATACA            GCCTCCATG TCT CATGGAGGC            TTTTTATATGGAATC 100 176
HC659_RS00650 NONE
        rplL  120465 ..  120485 +  -9.7  -5.29846   TTACCTGTAGGGGAA            GCTCGCTTT TAT GAGGCGAGC            TTTTTCTTTGCCATT 100 48
HC659_RS00660  121273 ..  121293 +    -4   -5.8901   TTTGTTTTTGGATGT            GGTTTTCT TAATT AGAAACCC            TTTTTTCTTTTGTCT  90 161
        rpoB NONE
        rpoC  128632 ..  128675 + -14.1  -3.86346   GTTGAATAACTGATT TAACTCTGCTGAAAGACTG CAAAAA CAGTCTTTCAGCAGATATA TTTATGAAAAAGTCA 100 32
HC659_RS00675  129061 ..  129095 +  -8.8  -4.68528   TTTATAACGTACTTT     TGTTTTTGCGTAAGAT TCC ATCTTGTGTAAAGACA     TTGTTTTTTGCCTTT  90 34
        rpsL NONE
        rpsG NONE
        fusA  132276 ..  132293 +  -8.5   -3.2918   TTGTAAGATGAGGAA             GTGAAAG CTTT CTTTCAC              TTCCTATCACTCTAT  70 75
         tuf  133552 ..  133571 + -13.6  -5.72053   TAGTATGATTTTAAA            CGAGACCC CTGC GGGTCTCG             TTTTTTGTTTGCTTA 100 41
HC659_RS00700  134743 ..  134774 +    -5  -4.82901   GAGGTTGCTGACACA      CCCGGCCGCTTTGC CATG GCAAGGTGTTCAGG       TTTTTCTCACGGAGA  74 177
        rpsJ  135126 ..  135136 +  -2.6  -3.34962   GTGTCGATATCGAAA                 TTAA ACT TTAA                 TTCTAAAATATAGAA  46 15
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY  145285 ..  145310 + -10.5  -3.14132   ATTTATGAAAAACTA         GAGGAAATGGA TTTA TCCATTCCCTC          TTAATAAAGAGAGGA  79 25
HC659_RS00815 NONE
         map  146806 ..  146826 +  -2.6  -2.89447   CTTGGGTGAACATTG            GCAAGA CCGAATTCA TCTTGC            TGCTTGTCGTTGGAA  42 95
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK  148330 ..  148363 +  -5.4  -3.66666   CTAAACAATGGGGAA     TTTCGGATGGAATC TCATAT GATTCTATTCGAGG      TTTCGACGTTTTGAA  60 138
HC659_RS00850  149339 ..  149359 +  -4.7  -2.55002   CGCAAAGACGATTGA            CTAGTTTCC CTT GTGAACTAG            GATTTTCGTGTGTTT  49 26
        rplQ  149759 ..  149772 +  -3.9  -2.85346   ACGGAGCACCAATGG               CAATT ATCG AATTG                GTTTAATCACATATT  46 6
HC659_RS00860 NONE
HC659_RS00865 NONE
HC659_RS00870 NONE
        truA  153195 ..  153205 +    -4  -3.34398   AAAGTTATAAGATAT                 CATA TGG TATG                 TATTTCAACCCCACG  50 77
        rplM NONE
        rpsI  154173 ..  154195 +   -12  -5.65927   TTACGTTTTCAAAAA           GCTCTCGACC TTG GGTTGGGAGC           TTTTTTCTTTCAATA 100 43
HC659_RS00890  155390 ..  155413 +  -3.1   -5.1675   ATGAAAGTATGAAAA          GCAGCGACCT GTTAG AGGG-GCTGC          TTTTTTCATAACTAC  73 29
HC659_RS00895 NONE
        cwlD  156776 ..  156795 +  -7.1  -4.85396   CACAGAAAAAGGAGA            CCCTCCG GAGTAA TGGAGGG             TTTTCTTGTGGTTCT  83 13
        salA  157951 ..  157969 +   -11  -2.95234   GGTATAAAAGGTGAA             CCGGGATT CCA GATCCCGG             CTTTCCCTTTATTCA  79 34
HC659_RS00915  159392 ..  159406 +  -4.2  -3.40639   ATGTAAAAGAATAAT               GTCTCC ACC GGAAAC               TTGCTTGGTCACATT  50 176
HC659_RS00925  161972 ..  161997 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
HC659_RS00930  165035 ..  165052 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf  165164 ..  165174 +  -2.4  -3.21235   TGTGAGAGTAGGACG                 CCGC CAA GCAG                 ATTTATTAATTCTAC  43 17
HC659_RS00940  165273 ..  165321 +  -5.1  -3.09516   ATCGGTCGTAGGTTC GAATCCTACCTGCGGAGCCATTG CTT CCATAGCTCAGCAGGTAGAGCAC TTCCATGGTAAGGAA  52 6
HC659_RS00945  165386 ..  165406 +    -4  -5.80364   ATGTATTATTACCAA            GGTTTCTC ATAAG GAGAAAGC            TTTTTTTATTGCGAT  90 42
HC659_RS00950  165501 ..  165515 +    -5  -3.43564   GTCTTCCGCTCCATT               TATCCT AAC GGGATA               TTGTAAATTGAATTG  55 28
HC659_RS00955 NONE
HC659_RS00960 NONE
HC659_RS00965  165948 ..  165964 +  -2.3   -3.8709   CGCACAGCGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  51 179
HC659_RS00970  167581 ..  167606 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
HC659_RS00975  170644 ..  170661 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf  170784 ..  170799 +    -4  -5.01732   GACGCCGCCAAGCAA              TTGCAC ATTA GTGTAA               TTTTTTAAAAAAGTT  72 28
HC659_RS00985  172583 ..  172608 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
HC659_RS00990  175646 ..  175663 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf  175783 ..  175815 + -17.9  -4.64844   TAGGACGCCGCCAAG      CAATAAACCCAGCTC ATT GAGCTGGGTTTTTTG      TTTTATATCTGTGCC 100 25
HC659_RS01000  177997 ..  178019 +  -9.2  -5.37043   GCATAAAATAGAGAA           GCCCAGAT GAATGAG ATCTGGGC           TTTTTTATATAACAT 100 35
HC659_RS01005  179059 ..  179078 +  -9.3   -5.1287   GAAAGCATAAAAAAA            CCGCTCA TAGGGT TGAGCGG             TTTTTTCCGTATAGC 100 31
HC659_RS01075 NONE
HC659_RS01080 NONE
HC659_RS01085  193907 ..  193917 +  -2.6  -4.52589   CTCTTGCCGGCACTG                 TTTT TTC AAAA                 TTTTATGTGGAGGGG  60 27
HC659_RS01090 NONE
HC659_RS01095  194092 ..  194114 + -10.7  -5.79595   GCTAGCCCAGTCACA           GACACCTTT GATCA AAAGGTGTC           TTTTTTCTTTTCGGA 100 28
        sigW NONE
        rsiW  195515 ..  195541 +  -8.8  -5.41143   AGTCCGAACGGAGAA         GAGTAAAGCG CGTTAGC CGCTTTGCTC         TTTTTTTGCGGGCTG 100 20
        cdaA NONE
        cdaR NONE
HC659_RS01120  199428 ..  199440 +  -3.4  -4.26938   CACATGTTGTAAAAT                CAAG CTTGT CTTG                TTCTTATTTTCTCAA  59 142
        glmS  201557 ..  201588 +   -11  -4.96848   GAGTAATAAATGTTT      AACCCCTTTGGATA AGAT TATCTAAAGGGGTG       TTTTTATGTCCAAAA 100 35
HC659_RS01130  201936 ..  201958 +  -3.4  -4.96435   CTTACAATGTACTTG           TGGGCCTTAG GTT TTAAAGCTCA           TTCTTTTTTTATTGA  70 227
        adaA NONE
HC659_RS01145  204691 ..  204748 +  -8.1  -3.86307   TTAGTTGAAGTGAAG CCGACAATTTTCAGGATTCAATGATCTA ACA TA-ATCATTGAAATTTTGAAGTTGTCGG CTTTTTTGTTGGAAA  77 370
HC659_RS01150 NONE
HC659_RS01155  209023 ..  209035 +  -4.9  -2.55309   AATGATGAATCTAAG                CATTT ATC AAATG                GATTTGTTATTCAAA  49 39
HC659_RS01160 NONE
HC659_RS01165 NONE
HC659_RS01170  210579 ..  210603 +  -7.2  -5.51402   TGTCGAAAGATCTAA          CATCCGCT GTTGTTATG AGCGGATG          TTTTTTTACATCTAT 100 205
HC659_RS01175  211202 ..  211221 +    -8  -5.00895   ACAGAGATATAAAAA            TAAACATC AAAA GATGTTTA             TTTTTATATCATACA  89 29
HC659_RS01180  212513 ..  212537 + -10.7  -5.78622   TTTCGAAAGTTCTAA          CATCCGCTCGT TAT ACAAGCGGGTG          TTTTTTTTAGCGTAG 100 41
        skfA  213585 ..  213617 +    -5  -4.66537   TTTAACATTTGAGAA     TAGGGAGT-TGAGCG TATT TGCTTATACTCCTTA      TTTTCTCTTAAGGGG  71 36
        skfB  214863 ..  214874 +    -3  -2.73334   AAGTCAAGGCAGGGA                TTCA GGAA TGAA                 TAGTCTATCATTGGT  41 15
        skfC  216350 ..  216373 +  -3.2  -2.85574   ATCAGCCAAAGCATA          CTTCACTCTAA TGA TTAG-GAGAAG          ATTTGATGCAATTGA  44 15
        skfE NONE
        skfF NONE
        skfG NONE
        skfH  219551 ..  219570 +  -7.9  -5.15634   TTATGATGAAACGGT            CCTTCCT ATAAGC AGGAAGG             TTTTTTAATGAAATA  93 78
HC659_RS01225 NONE
        ybdJ NONE
        ybdK NONE
HC659_RS01240  222961 ..  222980 +  -7.2  -3.24902   CAAGGCCGAAATCGA            TGA-GGCAG AGC CTGCCGTCA            TTGATGATGATATTA  62 296
HC659_RS01255  225714 ..  225738 +  -9.4    -5.252   GTGTGAATTATTAGG          TAAGCTGTTC ATGTA GGACAGCTTA          TTTTTTATGAGAATC 100 27
HC659_RS01260  227429 ..  227448 +  -7.2  -6.28401   AATAACGATAAAAAA            GAGACATT CGCG GATGTCTC             TTTTTTTATTTTTTG 100 36
        csgA NONE
HC659_RS01270  227986 ..  228006 + -16.9  -4.89521   TGAGCATGAGATTTA            GAGCCCTGC CGT GCAGGGCTC            TTTTATTTAGGATGT 100 25
        cypC  230250 ..  230273 + -11.1   -4.9445   AGGTAAATCAAAAAA          GCTCTCTTC CTTATC GAAGAGAGC           TTTTTAATTACTTCT 100 35
HC659_RS01290  232444 ..  232465 + -10.9  -5.48054   AAATAAATAAGAAAA           CCTTGCGAT AGTT GTCGCAAGG            TTTTTTGCTTTTAAT 100 40
HC659_RS01305  235358 ..  235405 + -18.9  -3.03124   TCACTTTCTAACATA TCGTTGACTAAAGCAACTATA TGTGAT TATAATTGCTTTAGTCAACGA TATTAGAAAGTGGGG 100 48
HC659_RS01310  236335 ..  236353 +    -3  -2.61912   ACGGTGGGATTTGGA             GCTGTCAT GAA AAGACTGC             ATTATGCGTGGATCA  41 16
HC659_RS01315  237608 ..  237638 +  -8.4   -5.9667   GAGAGCAGAGGATAA       GCATCTCTGATT TGGGATT ATTCAGAGATGC       TTTTTTTGTATTTTT 100 42
        purT  244516 ..  244541 + -14.1  -6.02919   AAAATAGAGTTTGAG         CAGGTCTTGTC ATGG GACAAGGCCTG          TTTTTTTCTTTCTCC 100 34
HC659_RS01350 NONE
HC659_RS01355  245952 ..  245981 +  -7.9  -5.80003   TAGTCTTCAAAGAAT       AGCAGTTTCCTTG ATTT TAAGGGAACTGCC        TTTTTTATTTATTGC 100 24
        cesB NONE
        pssA NONE
HC659_RS01370 NONE
HC659_RS01375  249010 ..  249036 +  -4.4  -5.40072   TATGAAGAGTAAAAA        GAGGAGCTTGC ATAAAC GCA-GCGCCTC         TTTTTTTGAAGAAAG  81 29
HC659_RS01380  249341 ..  249360 +  -7.2  -5.84381   GAGAATCCAGCTAAA            GCTTCTTT CAAC AGAGAAGC             TTTTTTTGTTGGTGA 100 27
HC659_RS01385  250791 ..  250811 + -11.2  -4.70659   ATCAAGTGAGCGGTG            TCCCCTGT GGTAA ACAGGGGA            TTTTTACATATCGCA  95 32
HC659_RS01390  251777 ..  251793 +  -2.3  -5.14163   GAGGAACTACAAAAA              TAGTTTT CAG ACAACTA              TTTTTATTAGTGAGT  69 23
HC659_RS01395  252952 ..  252974 + -12.8  -5.76633   TGCTGAATAAAAAAA           GAACACCTCG TAT TGAGGTGTTC           TTTTTTTCTATATGC 100 31
        gamR  257940 ..  257996 +  -5.3  -4.27026   GAACGAAATTCACCG TAGAACAGTCATATCATTCATAAAGCA ATG TGTTTTAAGAAGGGAATGGTGGTTCTA TGTTTTTATTTACGA  67 3
HC659_RS01420  258278 ..  258298 +  -8.3  -5.04868   GCGCTCTAAATCAAA            CAGCCAG AATAAAA CTGGCTG            TTTTCTTTAATTTCA  95 32
HC659_RS01425  259562 ..  259583 + -14.5  -5.48213   GTGAAAACTGAAAAA           GAACCTGCC CGGA GGCAGGTTC            TTTTTATTTTGAATG 100 37
HC659_RS01440  262161 ..  262189 +  -7.4  -4.83722   AACGCAAAAAGAGAA        AGGTGTTCAGCC CATAT GTCTGAACACCC        TTTTCTTATGATATT  83 3
        glnK NONE
        glnL  267133 ..  267151 +  -6.7  -5.52384   AGGATATAAACCAAA            CAGCC-GG CTGA CCAGGCTG             TTTTTTTGCTGCGCA  93 32
        kdgD NONE
HC659_RS01470  269781 ..  269811 +  -9.1  -3.85698   TGAAGCCGTAATGGT      GCT-GGAAAGAGGC GTGC GTCTCTTTCCCGGC       TTTATCACAGCCAGC  80 30
        gudP NONE
        gudD  272621 ..  272633 +  -2.7   -4.0127   CGGAAGCGCCCGTGT                CTTGT GCG ATAAG                TTTGATTGTAAATAT  55 14
HC659_RS01485  273414 ..  273439 +    -4  -5.40474   AATAATGGTGAGCAA         CCGCAGTT GAAACGTAAG AGCTGCGG          TTTTTTTAAACCAAT  78 36
        garD  275221 ..  275237 +  -3.6  -5.31456   GGTTATCAAAAAAGA              GGGTGG CGTGC CTGCCC              TTTTTTGTGCCTTCA  78 220
        mphK  276514 ..  276539 + -12.6  -5.61913   GGTGGTACCGCGAGA         CCCTCGTCCT TTGCAT AGGACGGGGG          TTTTTTGTGTTTCTT 100 316
        rtpA NONE
HC659_RS01505  277757 ..  277798 +  -5.3  -5.50313   ATAATTTTTATAAAA CACACACGTT-TTTCAATTA CAA TAAGTGTAATTACGTGTGTG TTTTTTGATTTTGTA  88 37
        ycbL NONE
        ycbM  279460 ..  279478 +  -2.4  -3.55444   CGCATGACATATTAA             TCGTAAGA ATT TCTTAAGG             TTTGAGAAATAAAAA  47 26
HC659_RS01520 NONE
HC659_RS01525  281205 ..  281227 + -13.4  -3.81339   CCAATATGTATAAAA           GGCCGATGCT GTC AGCACCGGCC           TTTCCATTATGAGTC 100 51
HC659_RS01540  282371 ..  282391 + -14.1  -5.27335   ATTTTAGAGACAGGA            CACCGTTCA AAT TGAACGGTG            TTTTTCTTTGAAAAG 100 34
HC659_RS01545  283211 ..  283240 +  -9.4  -5.86609   ATAACTGATAAAGAG       CACTGAGTCATT CTGCGA AATGGCTCGGTG        TTTTTGTTTTTTTAA 100 37
HC659_RS01550 NONE
        phoD NONE
       tatAD  285461 ..  285483 + -13.5  -5.60993   GGGCTGAATGCTGAT           GAGGCAGAC ACCGG GTCTGCCTC           TTTTTTTATGAAAGG 100 34
        tatC  286294 ..  286347 + -11.8  -4.51847   ATTGTGCGGCCGTAA CAGCGGCGATTCTCAATGCCCGGACA ATCG TGTCCAGGC-T-GAGGCTCGGCGCTG TTTTGTCGATTGTTT 100 78
HC659_RS01575  288085 ..  288107 + -10.6  -4.44797   GTAAACATAAAAAAA           GCCCCTGA ACATTAG TCAGGGGC           TTTTCATATTAATGA  95 37
HC659_RS01590  291511 ..  291528 +    -7  -5.63857   GAGTATTGAAGAAAA             GAAGGC GAATAA GCCTTC              TTTTTTTGGCTTTTT 100 32
        lipA  292317 ..  292341 + -14.5  -3.93216   TAATGAAAAACAAAA          CCTTGAAGAAT GCT ATTCTTCAAGG          TTATTCTGCTTTCAG 100 38
HC659_RS01605  294046 ..  294070 + -15.9  -6.02919   TCATAATGGAAAAAA          CCTTGAAAAGC CAG GCTTTTCAAGG          TTTTTTTATTTCTGA 100 35
        natA NONE
        natB  297802 ..  297820 +  -7.5  -5.05601   AATAAACTTGCGAAA             GGAGAAA TACAC TTTCTCC             TTTTTGTATATCCTG  89 36
HC659_RS01630  298859 ..  298893 + -13.8  -3.05275   CGACATTTTCAAATA     AAAAAGGAAATAGCCG TCA TGGCTATTTCCTTTTG     GTGTTTTATTCTTTG 100 25
HC659_RS01645  301807 ..  301837 + -14.2  -5.00895   ACAATAATAGAAAAG       GACCTTTCTTCACT TTA AATGAAGAAAGGTC       TTTTTATATAATAAA 100 123
HC659_RS01650  303412 ..  303423 +  -4.4  -3.83561   TTCCATATCCCATAT                GATG CTGC CATC                 CTTTTTTTGAAGGGC  58 180
        rapJ  305019 ..  305041 + -12.8  -5.70829   TTTCAATAGGAAATG           GCAGAGAACT ACA GGTTCTCTGC           TTTTTTTGTGCTGTT 100 32
HC659_RS01665 NONE
HC659_RS01670  307618 ..  307636 +  -8.8  -5.53991   TAATGATTGAAGTAG             CCCGGC ATTTTTA GCCGGG             TTTTTTTAGTACATA 100 38
HC659_RS01675  308755 ..  308781 + -13.1  -4.55295   GGTTAAATCATAAGA         TAGTGTGCGCC GGAGG GGTGCACACTA         TTTCTTTGTGAGAAA 100 28
        znuC NONE
        znuB  310312 ..  310335 +   -14  -5.60993   CCGATAACATGAAAA          GCAGTTTTCC CTAG GGAAAACTGC           TTTTTTTATAGAAAC 100 34
HC659_RS01695 NONE
HC659_RS01700 NONE
HC659_RS01705 NONE
HC659_RS01710  314271 ..  314293 +  -4.8   -5.4505   AATAAAACAAAACAA           GGAGGGAGGT TCA ATGTCCTTCC           TTTTTTGTTACCGAA  88 36
HC659_RS01715 NONE
HC659_RS01720  317071 ..  317095 + -16.5  -4.75174   CAGCAATAATAAAAA          CCCCGCTTGTG GAA CATAAGCGGGG          TTTTTCAATTACATC 100 32
        niaP  318616 ..  318635 +  -9.3  -4.02139   TGTCAACAATCTGAG            GCACCTC TTGAAT GAGGTGC             TATTTTTACATTTGC  85 253
HC659_RS01740 NONE
HC659_RS01745 NONE
       opuAC  323470 ..  323489 + -13.6  -5.53288   GAAGTAATGAAGAAA            GCAGCCTG TACC CAGGCTGC             TTTTTTTGCGTTAAG 100 34
HC659_RS01760  326243 ..  326265 + -13.4  -4.36729   GTTTTAACGATTGCT           GCCCGCCG GCTTGTA CGGCGGGC           TTTTGAGTTATTCAT 100 34
HC659_RS01765  326829 ..  326856 +    -5  -5.95539   AGAAGAAATAAAAAA        GAAATCATCT TGAAAAAT AGATGGTTTC         TTTTTTTGTTTGGAA  91 13
        amyE  329108 ..  329128 + -12.7   -5.5112   CTGGACTTACCGAAA            GAAACCATC ATA GATGGTTTC            TTTTTTGTTCATAAA 100 54
HC659_RS01775 NONE
HC659_RS01780  331875 ..  331925 +   -18  -4.29621   TGCAAGATTAGGAGT GTAATAGAAAAAAGCAGTACATGC CCA GCATGTACTGCTTTTTTATGTTAA TTTGCTTTCTTTGTC 100 22
HC659_RS01790 NONE
HC659_RS01795 NONE
HC659_RS01800  335583 ..  335606 +  -5.2  -5.53991   ATAAATCAAGGACTG          GCAGGGCGAT CTTT ATGACCCTGC           TTTTTTTGATAGATC  88 37
HC659_RS01810  337625 ..  337636 +  -2.2  -2.78504   GTGACATCCATACGG                GTTG AAGT CAGC                 TGATCTCTCTTGTTC  41 11
        nadE  338598 ..  338616 +   -16  -4.50976   AATAAGTTGAAGAAA             GCCCGCTC TCG GAGCGGGC             TTTTGTCGTGTACAG 100 36
HC659_RS01825  340061 ..  340101 + -22.1  -4.49939   GGGATCTTTATCAGC  CGATGTAAAAAGCCGTGCG CAG CGCACGGCTTTTTTTATCG  TTTTATCCCTTGTAT 100 18
HC659_RS01835 NONE
HC659_RS01840  342991 ..  343011 +  -5.3  -5.60993   GATAAATGTGAAAAG            CCGCCGCAT ATC ATCAGGCGG            TTTTTTTCTGCAAAC  88 39
HC659_RS01845  343835 ..  343860 +  -2.6  -4.67256   GTGTGGAAGGATGGA         GGAAGCTGATG TTTTT TGTC-GCTTCC         TTTTCTCCTTTATTC  62 17
HC659_RS01850 NONE
        pruA  346520 ..  346546 +  -8.7   -3.7829   CTAAGCGGGACTAAA         TGGGCATCCTC CCTGC GGGGGTGTCCA         TTTCATCCATATACT  78 37
        putP  348059 ..  348097 + -16.2  -3.08032   GTCGCAATAAAGATC   GAAAGGAGGAGGAAGGGG CTG TCCCTTTTTCCTCTTTTC   TCCTTTTAAGCGGCC 100 31
        putR  349450 ..  349465 +  -7.6  -3.94853   GAAATAAAAAAGAAA              CCAGTA CTTG TACTGG               TTTCGTCTTCACTTA  74 34
        ffoR  353688 ..  353701 +  -6.7  -4.14739   AAAACGAACAGGATT               CATGC TTTT GCATG                TTTTCCACTGCATGG  70 368
HC659_RS01915  363629 ..  363648 +   -10   -5.8901   TTTAGGATTTTGACG            GACACGCG TTTG TGCGTGTC             TTTTTTATTTTCTCT 100 36
HC659_RS01920  365018 ..  365031 +  -2.3  -2.78596   AGGATACCAGGAAGG               CGCAG AATA CTGGG                TATCATGGAAAAATC  41 394
HC659_RS01930  365642 ..  365655 +  -3.9  -3.29461   GTAATCATTCTATTT               TAATG GAGG CATTA                TTATGAAAAAAATTC  50 118
        zinU  366859 ..  366878 +   -10  -5.52384   ATCAATAGAAAAAAA            GCCG-TCCC ATG GGGAACGGC            TTTTTTTAATGAAAC 100 33
HC659_RS01955  369148 ..  369179 + -11.8  -4.87665   TGCTGACGAAGAGAT      TAGAAAGAGCGAAT AATG GTTCGCTCTTTTTA       TTTTTATGCATAAAA 100 10
HC659_RS01960  369586 ..  369607 +  -9.5  -4.39407   ACATTAAAATGGTAA           GCATCCAAT TGGA ATTGGGTGC            TTTTGCGTTATTTAC  91 34
        bglC  371168 ..  371192 + -12.2   -4.8622   AAAGTTTATAAAGAG          TCCCTGAGAG TTATT CTCTCAGGGG          TTTTTCATTACACAG 100 30
        hxlR  375865 ..  375885 +  -8.3  -5.91981   AAAGAATCGTTGTAA            GACGCTCTT CGC AAGGGTGTC            TTTTTTTTGCCTTTT 100 26
       srfAA NONE
       srfAB NONE
       srfAC NONE
       srfAD  402590 ..  402612 +  -9.9  -5.80817   CAACCGTGATCAAAA          GCGG-ACAGC TTCG GCTGTTCCGC           TTTTTTTGTGTTGAA 100 32
HC659_RS02020  403913 ..  403937 + -11.5  -4.81851   CCATTCAATATAAAA          GGATCAGCACT GTC AATGCTGATCC          TTTTTAAATTTGAGT 100 28
HC659_RS02070  412583 ..  412602 +  -3.6  -2.73635   AACAAAAAGGAGGAG            CTTGATCA TGGC TTATCAAG             ATTTCAGAGAATTTC  45 21
HC659_RS02075 NONE
        bsdD NONE
HC659_RS02085  414725 ..  414745 + -16.9  -5.74122   GCGGTAATATCGATA            GCCTGACGC CAT GCGTCAGGC            TTTTTTTATATAATG 100 34
HC659_RS02090  415633 ..  415660 + -15.6   -4.1021   GGATCAATAAAAAAA        CAGCCCGCAGAT CAAA ATCCGCGGGCTG         TTTCTGATTATAAGA 100 31
HC659_RS02100  419186 ..  419204 +  -3.7  -5.89947   TATCGTCTGAAAAAA             GCGCCCC CTCTA GGGGTTC             TTTTTTTTCGATTTA  90 31
       gerKA NONE
       gerKC NONE
       gerKB  423542 ..  423566 +  -8.5   -5.1167   AAAAAATGATAAAAA          GAGCGGGGG GATGCGG CCGCCGCTC          TTTTTATGTTCACTT 100 32
        yclJ NONE
        yclK  428106 ..  428132 +  -8.7  -5.00616   AGCAATAGCATACAG        GGCGG-CGCATC AACT GATGCATCCGCC         TTTTTTGCACACCGC 100 33
        rapC NONE
        phrC  429523 ..  429546 + -12.5  -5.45802   TGACGTAAGAACAAG          CCCCTTCTC ATTAGC GAGAAGGGG           TTTTTCTTTTCAAAA 100 33
        yclN NONE
        yclO NONE
        yclP NONE
        yclQ  435428 ..  435452 + -12.2  -5.84381   AAGTAAAACCAAAAA         GAGCCTCCGCT AAGT AGCGG-GGCTC          TTTTTTTGTTAATCA 100 35
HC659_RS02210  439458 ..  439473 +  -6.1  -5.72616   CCGCTGGTGAATCAA              TCCCC TGTAAC GGGGA               TTTTTTTATGTCCGT  91 31
        gabT  442286 ..  442305 +  -4.2  -2.56164   TGAAGGGCTCAGCAT            CTTGGAGG CGGG CCTGCGAG             CTTAATCATTGGAAA  47 1
HC659_RS02225  443786 ..  443810 + -20.1   -5.0916   AATGCACGCTCCTGA          GAGCTGCCGGA TTT TCCGGCAGCTC          TTTTTGTGTTCCGGC 100 44
        glcU NONE
HC659_RS02235  445568 ..  445594 +    -8  -4.67607   GGTTAAACATAAAAA         GCGACCCAGA CATGACA TCTGGATCGC         TTTCTTTATTAGGCA  84 35
HC659_RS02255  448972 ..  448991 + -13.6  -5.61881   AGAGGAAAGAGAAAA            GGCTCCTG AAAC CAGGAGCC             TTTTTATTTTTAAAA 100 17
HC659_RS02260 NONE
HC659_RS02265 NONE
HC659_RS02270  452175 ..  452197 +   -12  -5.60864   AATCAATAACCGACC           ACCCGTGACA CAA TGTCACGGGC           TTTTTTTACTATCTC 100 32
HC659_RS02275  453324 ..  453363 + -13.7  -3.90291   TTAAGAAAGCTCTGA TGAATCAGGCCGGTGGCAG ATGG CTGCC-CCGGCCTG-TCCA  TTTCCTTACGAAAAT 100 26
        lepB  454101 ..  454126 +  -8.2  -5.31275   AAAATGATGATGAAA         CGGTGCGGAG CCGGCT TTCCGCCCCG          TTTTTTATGATAGAA 100 105
HC659_RS02290  455174 ..  455197 + -11.8  -4.05861   GAAAAATGAAAAAAA          CCCTTCACAA CATT TTGTGAGGGG           TTCTATTTTGTGTCG  91 32
HC659_RS02300  456252 ..  456273 + -10.2  -5.37593   GGTACTATAAAAAAA           GAGAGTCC TAAGAT GGACTCTC            TTTTTTAGTTTGGCA 100 31
        pxpA NONE
HC659_RS02310 NONE
HC659_RS02315 NONE
        pxpB NONE
HC659_RS02325 NONE
HC659_RS02330 NONE
        lipC  462497 ..  462534 +   -18  -2.79679   AAGAATTATCAGTTT   CATAGAAAACGCGCCT CATGAC AGGCGCGTTTTTTATG    TGTGATCGAAATATT 100 21
HC659_RS02340 NONE
HC659_RS02350 NONE
HC659_RS02355  466376 ..  466397 + -13.1  -4.76312   GATATTCCATAAAAA           GCATCAGCT TACC AGCTGATGC            TTTTTCAATATTGTC 100 29
        mtlR  468653 ..  468676 + -11.8  -4.99035   TGTAAACCTGCATGG          CACACGTCAA AAAT TTGGCGTGTG           TTTTTCTGTGGATGG 100 36
HC659_RS02365  470371 ..  470400 + -14.4  -3.66178   ACATTCATAAAAGAA       GAAGCCCGTCCAC TTTAT GTGG-CGGGCTTC       TTTGCAGTTGCACAG 100 31
HC659_RS02375 NONE
        lyxE  472516 ..  472538 +  -8.5  -5.47159   GATCCAAGAATATAA          GGATGAGGCT TAGC AGCC-CATCC           TTTTTTGTATTGAAA 100 26
HC659_RS02385 NONE
HC659_RS02390  474050 ..  474071 + -12.9   -5.7946   AAAGAATAAGACAAA           CCGCCCGGC GTAC GCCGGACGG            TTTTTTTATTGCAAA 100 421
         amj  474977 ..  474999 + -13.5  -5.16572   GGTTTTAATAAGAAA           GGCTGGATC ATAAA GATCCAGCC           TTTTTTGCGTTCCCT 100 33
        lrpC NONE
HC659_RS02410  478180 ..  478198 + -10.3   -5.4756   TAAATAATAAAAAAA             CCTGTGC CTATC GCACAGG             TTTTTTATTGGACTT 100 34
HC659_RS02415 NONE
        epsK NONE
HC659_RS02425 NONE
HC659_RS02430 NONE
HC659_RS02435  485389 ..  485409 +  -9.7  -6.20267   AGATACAGAATAAAA            CAGAGGCGA TTT TAGCCTCTG            TTTTTTTATTTTTGG 100 28
        kimA  487693 ..  487716 + -12.5  -4.56597   AAAAGTAAAGCTCTA          GGACCAAGG GAATCA CCTTGGTCC           TTTTTAGCGGGAAAA 100 33
        mutT NONE
HC659_RS02450  489990 ..  490011 + -11.6   -5.4505   GTTATTCTAAAAAAA           CAGAGGCC CCAAAA GGCCTCTG            TTTTTTGTTGGAAAC 100 31
HC659_RS02480  493817 ..  493842 +  -6.1  -5.52384   ATGGAATAGCAGAAA         GCAGACGGA CACCGCGA TCCGCCTGC          TTTTTTTAGTGGAAA  91 32
HC659_RS02485  494348 ..  494373 + -12.6  -5.79526   CCTGTAAATAAAAAA         GCGATCCGGC ACATCA GCTGGATCGC          TTTTTTTTGGAATCT 100 63
HC659_RS02490 NONE
HC659_RS02495  495142 ..  495164 +   -15  -3.78419   GAAGGCATAATCAAA           GCCCAAAACA TCA TGTTTTGGGC           TTGTCTCTTTACTCG 100 31
        dctS NONE
        dctR NONE
HC659_RS02520  500873 ..  500891 +  -8.8  -5.73672   AGTCTGAAAAAAGAA             CGGCCC ATCCATG GGGCCG             TTTTTTTAATTGTTT 100 34
HC659_RS02525  502284 ..  502313 + -12.3  -5.24129   ACAAATGCTATAATA       CAAACAGTGCCTA ATGT TAGGCACTGTTTA        TTTTTTGTCGAAAAA 100 244
HC659_RS02530 NONE
HC659_RS02535  504072 ..  504083 +    -3  -4.63479   GCTCACGTAAATCAA                TATC ATTT GATA                 TTTTGGTTTATACTA  62 69
HC659_RS02540  504460 ..  504486 + -16.6  -5.00895   CAAATCCTGTGTAAT         CGCGCTGTTCCC TTT GGGAACGGCGTG         TTTTTCTATACTGGA 100 27
HC659_RS02545  505740 ..  505754 +  -7.1   -5.1383   GAGTCATAAAAAAAA               GAGCC TTACC GGCTC               TTTTTATGTATTGTT  90 32
HC659_RS02560  507294 ..  507305 +  -5.8  -3.50466   TGAAAATAAGCAGGC                TGGG AATG CCCA                 TTACTTGGTATTTTT  57 144
HC659_RS02570  508760 ..  508781 +  -7.3  -5.08169   TCTAATGAAGAAGGA           CACTGCC GGTAAAAG GGCAGTG            TTTTTTCCCGTATAT  90 36
HC659_RS02575  510397 ..  510436 +  -8.6  -2.63073   TCTTGGGAGCGGATG  GAGCAGCAG-CCGGCATAT TCG AGATGCCGATCTGCTTCTC  ATCTTATTGAAAAAC  68 228
        cshA  512094 ..  512116 +   -15  -5.47159   TTTGATCGATTCAGA           GCCCAAAACA TGA TGTTTTGGGC           TTTTTTATGTTCGCG 100 41
HC659_RS02585 NONE
HC659_RS02590  514389 ..  514412 +  -6.6  -5.75342   TTTGTCAACAATCTG          AAGCGACGGT TAAT ACCGCCGCTC           TTTTTTTTGCACGAA  93 213
        acpS NONE
HC659_RS02605  516648 ..  516666 +  -8.9  -5.63103   GAAATAACCGCCAAA             GGCCAAA CATGA TTTGGCC             TTTTTTTCGTTAGAC 100 34
         alr NONE
        endB NONE
        ndoA  518688 ..  518706 +  -8.9  -6.09196   TAGACATATTTGCAG             GTTGCTC AAATA GAGCAAC             TTTTTTTGTTTTCAA 100 38
       rsbRA NONE
        rsbS NONE
        rsbT  520369 ..  520381 +  -7.7  -3.05816   GGAACAGAGATACAA                GCCAT CAA ATGGC                TTCGGTAGGAGGTAA  65 5
        rsbU NONE
HC659_RS02645 NONE
        rsbW NONE
        sigB NONE
        rsbX  523648 ..  523667 + -13.6  -5.82281   GAATAAGAACAAAAA            GAAGCCGG AATG CCGGCTTC             TTTTTTTATGTGTTT 100 42
HC659_RS02665  525901 ..  525918 +  -9.9  -5.21709   ATGGTAAAATAAAAG             CACTGCT TACG AGCAGTG              TTTTTTCCTATAGAA 100 29
HC659_RS02675  526667 ..  526689 +  -5.6  -3.01745   CTTGACACTGCAAAT           CAAGGCTGAT ATA ATAAGTCTTG           TCTCATTATTCCACA  53 116
HC659_RS02680 NONE
HC659_RS02685  526843 ..  526855 +  -3.3   -2.8294   GCGTAAGCGGCGCGA                GGGTT CAA ATCCC                TCCTTCTCCGCCATA  44 0
HC659_RS02690 NONE
HC659_RS02695 NONE
HC659_RS02700 NONE
HC659_RS02705 NONE
HC659_RS02710  527490 ..  527514 + -13.7  -3.00946   TTTGTGACTAAAACT          GACCACTTACT TTA AGTAGGTGGTC          TGATTTGTCCGCAAA 100 101
HC659_RS02730  531482 ..  531498 +  -4.4  -2.68479   TTTGTATTGCTTGTA              GTCGGA TTGAT TCTGAC              ATTCGTATTTACTAA  47 145
        cspC  534084 ..  534105 +    -8  -5.77988   AATCGTTTATACAAA           CAGGCTCT TTATAT AGGGCCTG            TTTTTTTATGTCTAT 100 46
HC659_RS02760  538941 ..  538966 +  -5.4   -5.4505   CGGCAATATCAAAAA         GACCAAGGGT TTTGAC GCCCTTGGTA          TTTTTTCTTCAAGAA  88 104
HC659_RS02770  541487 ..  541512 + -10.6  -5.30686   TACCTAATATTGTTT         GCCATACAAT TAAGAC ATTGTATGGC          TTTTTTGTGCGTGTT 100 34
HC659_RS02775  542894 ..  542907 +  -2.5  -4.51763   AAAGGATAGGATTGT               TTAAT TTAC ATTAA                TTTGTTATATTGTTA  60 39
HC659_RS02780  543538 ..  543556 +  -7.4  -6.62203   AATAAAACAAGATGA             GAAGGCTT TGT GGGCCTTC             TTTTTTTTTTGTTGT 100 78
HC659_RS02785  544387 ..  544406 +  -6.5   -5.7946   TCTATAGAAGAAAAA            CAAGCAT AGTAAG ATGCTTG             TTTTTTTCTTAGGAC  93 93
HC659_RS02800  547346 ..  547370 + -10.1  -4.92314   CGATCGCATACAAAA          TACCAAGGG CCAGCAA CCCTTGGTA          TTTTTATACCTTCAT 100 83
HC659_RS02810  549933 ..  549952 +  -5.1  -3.99436   CCAGGCCACGATACG            TCTGTTT AGCGAA AAACAGA             ATTTTTTATTTGCTC  61 131
HC659_RS02815  550455 ..  550471 + -10.8  -2.52543   ACGATAACTCAGAAA              GCCCGC TTTTC GCGGGC              TCGATTGAAGCAGAT  77 34
HC659_RS02830  552709 ..  552734 +   -12  -5.24129   TCTGAATTATAGAAA         TACCAAGGGT GTCAAA ACCCTTGGTA          TTTTTTCTGCCAAAA 100 125
HC659_RS02840  555063 ..  555082 +  -7.8  -5.21709   TACTTGCAATGTAAA            CAGGCCTC TAAA GAGACCTG             TTTTTTAATATCCAG  93 327
        aseR NONE
        arsB  557406 ..  557436 + -13.4  -5.77734   CAATGTGTTGTTCAA       CAGGTGTCTGCG AGCTGAG TGCAGACACCTG       TTTTTGTTTTTATTT 100 384
HC659_RS02860  558356 ..  558377 + -11.7  -5.79595   AGAACCTTAAAAGGA           GATACCAAC CGAT GTTGGTATC            TTTTTTGTTTTAGAG 100 51
HC659_RS02870  561186 ..  561217 +   -11  -3.65199   TGACGATTCATATTC      TGGAAGCCGAATGTG TTT CAC-TTCGGCTTCGA      TTTGGATAGGGCATT  83 323
HC659_RS02880  562442 ..  562475 + -13.4  -4.20868   GAGGCACGATATCTA     GGAGGAGTAAGATT TGTTCT AATCTTACTCCTTC      TTCTTATTTTGAAGC 100 68
        ydfH NONE
        ydfI  565484 ..  565503 +  -6.5  -5.73563   TGAAAATTGCCCAAA            CGTACAT GCCCGA ATGTACG             TTTTTTTCATTTCAT  93 51
HC659_RS02910  567757 ..  567776 +  -7.9  -5.50499   TGTGTAATAGAAAAA            GCAGATC TTTAAT GATCTGC             TTTTTTTGCATATGG 100 34
HC659_RS02935 NONE
HC659_RS02940 NONE
HC659_RS02945  574421 ..  574449 + -12.6  -5.10163   TACGAAAGTATGTAA        GAACAGTTGCTG CTTGT CAGTAACTGTTC        TTTTATTTTCACATT 100 41
HC659_RS02950  574948 ..  574963 +  -7.6  -5.95946   AATAAGGCAAAAAAA              GAACTC AAAT GAGTTC               TTTTTTTATTCTTCA 100 44
HC659_RS02975  577919 ..  577947 +  -3.9  -4.32857   TAAACAAACGTAGAA       GCTTCGGAATCA AAAAAA TG-TTCCGGGGC        TTTATATTTGAGCAC  64 356
HC659_RS03000  579931 ..  579948 +  -6.9  -5.60993   ATTTCTGTGTTATTC             GTCCGGC ATCA GCTGGGC              TTTTTTTATAAAGGA 100 145
HC659_RS03005  580562 ..  580579 +  -9.9  -4.18762   ACATATAAAGAAAAA             GGACAAC AGCT GTTGTCC              TTTTCAATGCCGCTT  86 140
HC659_RS03025 NONE
HC659_RS03030  587925 ..  587946 + -11.7   -5.1675   GAATAATCGAGAGAA           GAGTGATGA ATGG TCATCACTC            TTTTTTCATGACTAA 100 35
HC659_RS03045  590720 ..  590750 +  -9.9  -4.88918   TAGGGCAGAATTCAT       AAAAAAACCTGAC ATGAC GTCAGGTTTTTTG       TTTTATTTAGAATAA 100 24
HC659_RS03055  592432 ..  592458 +  -8.1  -5.80248   ATTTGTATGATCCGG         TACCAAGGG GGAGCAGAA CCCTTGGTA         TTTTTTTATGTATTC 100 40
HC659_RS03060  593812 ..  593831 +    -5  -5.64006   AAAAGTGTAAAAAAA            GACACC AGAGCTTG GGTGTC             TTTTTTTGATTAAGT  88 31
HC659_RS03065  595160 ..  595186 + -19.6  -3.52918   AACAAATAAGAAAAA         GAACTCCCGTAC CTT GTACGGGAGTTC         TTGATTTAAAACTTG 100 32
HC659_RS03080  598231 ..  598249 +  -3.8   -3.2614   CTTCAATCGTAATAT             CATGGCCT TCA AGCTCATG             TTCATCTAACCGCTC  48 198
HC659_RS03095  600193 ..  600208 +  -7.5  -5.88197   CTTAAATCAGTAATT              GCCGC CTGACA GCGGC               TTTTTTTATGTTTGG 100 28
HC659_RS03100  600957 ..  600976 + -10.8  -5.66989   CTAAATCATAAAAAA            TCCTCCTT TTAC AAGGAGGA             TTTTTTTGCTGTTTG 100 30
HC659_RS03110 NONE
HC659_RS03115 NONE
        celB NONE
        gmuD NONE
        gmuR NONE
        gmuE  607640 ..  607658 +  -3.8  -3.50746   GGCAGCATCCGGGGA             GGTGCG ATCATGA CGCATC             CTTTATTTTTAGAGC  52 13
        manA NONE
        gmuG  609720 ..  609759 + -10.8  -2.53911   TCCGTAATGTCACAA  TTAAGAAGGTGCTCAAGA AGTT TCTTGAGCACCTTCCCAC   TGGATTAAGCATTCA  77 42
HC659_RS03155 NONE
HC659_RS03160  611115 ..  611126 +    -3  -2.61144   TCTCATCACCCGCTC                CATT ATTG AATG                 ATCTTTGAAAACTAA  41 23
HC659_RS03165  612893 ..  612918 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
HC659_RS03170  615959 ..  615976 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf NONE
HC659_RS03180 NONE
HC659_RS03185  616386 ..  616405 +  -5.7  -4.62441   TTTACTATATCTTCT            GCTTGGT GTCATA GCCAAGC             TTTCTTTATATCGGG  73 87
HC659_RS03190 NONE
        tsaE NONE
        tsaB NONE
        rimI NONE
        tsaD  620127 ..  620151 +  -7.2   -5.1634   TGACTTCTTATCAAA          GTCTCACG AGATAATAG CGTGAGAC          TTTTTATATGTTTGT  90 12
        moaC NONE
HC659_RS03225 NONE
       tatAY NONE
        tatC  624548 ..  624581 + -12.7  -4.98128   TTCGGGGCAATAATA     AAAAATCCATTTCTC ATGC GAGAAATGGATTTTC      TTTATTTTTGGTTCT 100 28
HC659_RS03250  626011 ..  626028 +  -6.3  -3.67597   CGTGAAAGCGACATT             TTAGCTG TTAT CGGCTAA              TTCTTAAATAAACAA  63 8
        groL  627785 ..  627819 +   -13   -4.4727   AATAAAAAAAGAGAA     GGTCTTTCATCAGTTT ACT AAACTGTTGGGAGACC     TTTTCTCCATATTAG 100 104
HC659_RS03265 NONE
HC659_RS03270  630198 ..  630210 +  -3.3  -4.09243   CATCATGGCGTGTAG                GAGTG ATT CACCC                TTTTAAGAAACTGTC  57 43
HC659_RS03275  630997 ..  631008 +  -4.4  -3.51137   AGGTATAATGATAAA                GAAC ATTC GTTC                 TTGTATGGGGTACTT  55 493
         dcm NONE
HC659_RS03285  633569 ..  633592 + -13.9   -5.5762   CATACTAAAAAGTAT          CGGAGCTGG ATAAAA CCAGCTCCG           TTTTTTATCTTTAAT 100 60
        ydiR NONE
       bsuRB NONE
HC659_RS03305  639125 ..  639163 + -12.6  -5.24989   CATTTGCAAATTTTC   AAGGCTTCTCATGAGTTC ACC GAACTTGTGAGAAGCTTC   TTTTTTGATGTATAA 100 285
HC659_RS03310  639894 ..  639910 +  -5.2  -3.43446   AAGTATTCTAGTTCT              GTTCTT GTTGG AAGAAC              TATTCTTAAGTATCC  55 145
        gutB  644373 ..  644394 +  -6.6  -3.59252   ATCGCTGAGTGAACA           GGGAGGAT CTTCGT ATTCTCCC            TCTTGTTTACTGGAA  64 33
HC659_RS03330 NONE
HC659_RS03335  646897 ..  646933 +  -2.4  -5.87996   TTGTAAATCATTGAA   GATGTTTCTTGAAAGTC TTTG GACTTTTGGGGG-CATC    TTTTTTTATTGCTTA  83 35
HC659_RS03340  647774 ..  647800 + -14.4  -3.27674   ATAAGTAATACATAG         GAGGCCGCAGCT TTC GGCTGCGGCGTC         ATTTTATCATAAAAT 100 33
HC659_RS03345 NONE
HC659_RS03350 NONE
HC659_RS03355  650641 ..  650665 +   -10  -5.63517   CTCATACAGTGAAAA          GTCCGGAGTG ATCAG CACTCGGGAC          TTTTTTATTTAGGAG 100 43
        iolT  653721 ..  653744 + -15.4  -4.99134   GGATAATTAAAAAAA          GAATCCGCAC CCGA GTGCGGATTC           TTTTTGGTTTCAAAT 100 35
        walM  655629 ..  655648 +  -6.5   -5.1244   TATATAATCTGGAAA            GCAAGAA GTCACA TTCTTGC             TTTTTCTATTGGTGG  86 47
HC659_RS03380  656725 ..  656748 +  -8.8  -5.14563   GATTAACTAATAAAA          ACCACTCGGC ATAA GCTGAGTGGC           TTTTTTAATGGACGA 100 31
        mneS  663883 ..  663901 + -13.2  -5.13521   TGTCAACAATCTGGA             GCTTCCTG TCA CAGGAAGC             TTTTTTGCGTGATTT 100 228
HC659_RS03425 NONE
HC659_RS03430  666163 ..  666179 +  -4.3  -3.90744   TCGGGTCATGAGGGG              CGGGCGA GTT TCGCGTG              TTGTTTAGAAAGAGA  59 1
HC659_RS03435  668504 ..  668533 +  -2.1  -4.04353   AACGGCCTTGCCAAA       GAGGGCGGA-GCGA GCT TCATATCTGTCCTC       GTTTTTTTCTGTGTC  53 113
        guaA  670138 ..  670169 + -12.4  -5.24515   ATCAATTAATGGAAA      CCATCTTTTTGGCA ATTT TGCCGGGAAGATGG       TTTTATTTGTTTATT 100 43
        pbuG  671835 ..  671854 + -13.6   -5.7946   ATAAGGAATGAAAAA            CCAGCTGC ACTG GCAGCTGG             TTTTTTTGTTGCAAA 100 37
HC659_RS03450  672846 ..  672863 + -11.3  -5.71712   GCTTTAATGAAAAAA             CCGGCTA ATCC TAGCCGG              TTTTTTTATGTCACA 100 34
        fbpA  673184 ..  673201 +  -5.5  -5.85244   GATATAAAGAGGTGA             GTCTGCT GAAA AGCGGGC              TTTTTTGTTTTGATT  91 46
HC659_RS03460 NONE
HC659_RS03465  674360 ..  674405 +  -4.1  -5.86976   ACGATACATGTACCA TGCCCGGTTTGTATTGC TTCCTCATAAGT GCAATGCAGAGCGGGTA TTTTTTATTTTCTGA  90 257
        purE NONE
        purK NONE
        purB  677366 ..  677386 +  -3.9  -3.28712   TTTAGGTTTAGCATA            GAAGAAGCT TTT AGCGGCTTC            TTCTAAGCCGCCGCA  48 25
HC659_RS03485 NONE
        purS NONE
        purQ NONE
        purL NONE
HC659_RS03505  682731 ..  682750 +  -6.4  -4.40003   GAAAAATGACATAAA            GGCAGC GCAGTTCG GCTGCC             TTTCTCTTTCTGCCC  76 46
HC659_RS03510 NONE
        purN NONE
        purH NONE
        purD  687266 ..  687285 + -10.7   -5.9218   AATAAGTGAGGAAAA            CCCGCAG ATGAAG CTGCGGG             TTTTTTTATTATGTA 100 36
HC659_RS03535  689116 ..  689140 + -13.7  -4.39571   TGGGCATAAAAAAAA          GCTTGATCACG TTT TGTGATCAAGC          TTTTCCATTTATCCG 100 7
HC659_RS03545 NONE
HC659_RS03550 NONE
HC659_RS03555  692591 ..  692615 + -13.6  -4.55295   CTTCCAAATAAAAAA         CCGCCC-TGCC GTCT GGCAAGGGCGG          TTTCTTTATGAAACA 100 30
HC659_RS03565 NONE
        pcrA NONE
        ligA NONE
HC659_RS03580  700672 ..  700696 + -18.7  -4.91511   ATGACTGATAGAAAA          CCCTTGTGCCA TAT TGGCACAAGGG          TTTTTATGATACAAT 100 33
HC659_RS03585  701846 ..  701871 + -14.1  -4.53163   GTGTAGATAGAAAAA         GCCAATGGGAT TCCA GTCCCATTGGC          TTTTATAATGTATCA 100 35
        gatC  704867 ..  704880 +  -2.4  -3.01162   CTGGACTAAAGGAGG               GACA CAAGAA TGTC                ATTATTTGATCATAA  42 32
        gatA NONE
        gatB  707785 ..  707802 +  -8.4  -5.67063   AACGCTAATAAAAAA             GCAGCC CTTAGA GGCTGC              TTTTTTTATGGTCAA 100 33
HC659_RS03620  711958 ..  711988 + -14.8  -2.76696   AGAAGAGTAAAAAAA       CTAAAAGCCTCAGC TCT GCTGGGGCTTTCAG       CTTGTTGAAAAACCC 100 31
HC659_RS03625  713217 ..  713261 + -16.1  -4.12902   AGCCAAGCTCAGAAT GTTGACAAAATCCTAAAAC AGTTTTC GTTTTAGGATTTTGTCATC TTTTCAGCGTGATTG 100 55
        rlmD  715122 ..  715150 +  -4.7  -5.05228   TAACACCATTAGCAA        GAGAGATAACT AAATTGG ATTTATCTCTC        TTTTTATCGTTTAAT  77 325
HC659_RS03640 NONE
HC659_RS03645 NONE
HC659_RS03650 NONE
HC659_RS03655  721818 ..  721828 +  -5.4  -3.93583   AGATGAGATTGTGAT                 GATG GTT CATC                 TTTATGACTAAATTA  63 4
HC659_RS03685  727310 ..  727333 + -11.8  -5.94214   CTAGATGAAGAAAAA          GCTCTCCTTT TTAA GAAGGAGAGC           TTTTTTTGTTATATT 100 33
HC659_RS03690  728675 ..  728693 +  -8.9  -5.08824   AAATAGAATGACAAA             GACCCTT GCGTA AAGGGTC             TTTTTTGCGTAGAAA 100 35
        rapH NONE
        phrH  730087 ..  730101 +  -7.1  -5.24551   AGTGATCAGAAGAAA               GCCCT TAGCT AGGGC               TTTTTCTTGCTTTAC  90 14
HC659_RS03705  730985 ..  731003 +  -8.8  -5.60993   GTGAGTAAGGAGTGA             GCAGGCTG TTA TGGCCTGC             TTTTTTTGTCCCGGA 100 33
        yeeK  731572 ..  731592 +  -9.8  -5.63857   ATGATAAAAAGAGGA            CACTCTTG CAGAT CAAGAGTG            TTTTTTTAGCTTTTT 100 49
HC659_RS03715  732248 ..  732274 +  -6.7   -3.1458   TCAGTGCTTGATTAA        CATGTGGTAAAG GATT CTTTGCC-CATG         TATGTACTTTTTGGA  61 26
HC659_RS03720 NONE
HC659_RS03725  733643 ..  733665 + -13.5   -3.9461   TGAATAGTCTAGAAA           GACCTTCGG CGCTT CCGAAGGTC           TTCTTATTGAAAAAG 100 54
HC659_RS03730 NONE
HC659_RS03735 NONE
       cotJC  734900 ..  734915 +  -4.7  -3.41229   AAAATGGTCTGTTTT              TGCAG TTTGGT CTGCA               TTATAATCAAGGTGT  55 85
HC659_RS03745  735508 ..  735525 +  -3.3  -5.69068   ATTACGGCAGAATAA             GCGTCCT TTGC AGGGGGC              TTTTTTGTCTTTTTC  84 26
HC659_RS03755 NONE
        yesM NONE
        yesN  739390 ..  739422 +  -4.2  -5.58209   GAATTCAGAAGAAAA     CAGGGAGGCGCT-TCC GCA GGATAGC-CATCTCTG     TTTTTTTGACTTTCG  84 2
HC659_RS03770 NONE
HC659_RS03775 NONE
HC659_RS03780 NONE
        yesR NONE
        yesS NONE
HC659_RS03795 NONE
HC659_RS03800 NONE
HC659_RS03805 NONE
HC659_RS03810 NONE
HC659_RS03815 NONE
HC659_RS03820 NONE
        yesZ  754635 ..  754658 +  -6.8  -5.36441   AATTTGACAATCCCA          GCTGATTC TTTGCATC GAATCAGC           TTTTTTCTATGGAGG  91 21
HC659_RS03830 NONE
HC659_RS03835 NONE
HC659_RS03840 NONE
HC659_RS03845 NONE
HC659_RS03850  762149 ..  762161 +  -5.5  -2.71712   CCATGCAACGTTGAG                CGGAG CTT TTCCG                GTTTAGAAAGGAAAG  51 27
HC659_RS03855  762931 ..  762950 +  -8.6   -5.2204   GACTCTTAGAAAAAA            GCTTGCAGC AAG GC-GCAAGC            TTTTTATTGATTGTA 100 39
HC659_RS03875  765413 ..  765448 + -15.6  -4.98531   AATAGGAAGTTTCCA    GGCATATGATTGTCCG TCAC CGGGTGATCATATGCC     TTTTTGATTTGAACA 100 36
HC659_RS03880 NONE
HC659_RS03885 NONE
HC659_RS03890  767471 ..  767489 + -12.4  -5.32699   GAAAAGACGCTATAG             CCTGTCCG GAT CGGACGGG             TTTTTTAGTCTTTAA 100 26
HC659_RS03900  769279 ..  769300 + -11.7  -4.89233   TATTAAATAGGAAAA           GTCCAGAAA GTGA TTTCTGGAC            TTTTTAGTCTTGCTC 100 35
HC659_RS03910  773718 ..  773735 +  -9.9  -4.84363   GATATAGATAAAGAA             GACTGGA GACA TCCAGTC              TTTTTAGTCCTTTCG 100 34
HC659_RS03915  776085 ..  776121 + -19.5  -5.68023   AAATAAGATGAAAAA    GAGCCTTGAGCGGGCGC ATT GCCTTCGCTCAAGGCTC    TTTTTTTGGTTATAC 100 35
HC659_RS03920 NONE
HC659_RS03925 NONE
HC659_RS03930 NONE
HC659_RS03935 NONE
HC659_RS03940  781134 ..  781153 +   -15  -5.07567   GCTGGATTAAAAAAC            CCCCTGCC GCCT GGCAGGGG             TTTTTTCAGCTATGC 100 31
        yfmT NONE
HC659_RS03965  787257 ..  787304 + -15.7  -2.66272   CGAAAAAGCGCTTGA GGAAGAGTAAGAGACCGGGGA CAAACA TCCCCGGTCTTTTTCTTATCC TGCATTTCCATGAAA 100 16
HC659_RS03970  789294 ..  789315 + -10.8  -5.44721   CTGGAAAGCTAAAAA           GCGTGGCC GCAGCA GGCCGCGC            TTTTTTTCACATAAT 100 29
HC659_RS03975  789874 ..  789897 +  -3.1  -5.80727   AACAGGAAAGTGAAA          GACGGGT-GC TGTAT GCTGCTCGTC          TTTTTTATTGTTTTT  88 40
HC659_RS03980  790420 ..  790435 +  -5.4  -4.72007   GAAAAGTTTGTTAAA              CGCTAT TTTT GTAGCG               TTTCTTTTAATGGAA  75 39
HC659_RS03985  791671 ..  791692 + -10.9   -5.2204   GCATTAATAACGAAA           GACACTGCG CATA TGCAGTGTC            TTTTTATTCGTTATA 100 34
HC659_RS03990  792196 ..  792215 +  -7.8  -5.66684   AATGGCAGTAAAAAA            CCCGCC CTTTAGCA GGCGGG             TTTTTTTATAAATTA 100 113
HC659_RS04000  795094 ..  795106 +  -6.2  -5.88565   ACGAAATAAAAAGGA                GGGC GGAAA GCCC                TTTTTTTGTTGTAAA  93 32
HC659_RS04005  795620 ..  795638 + -11.7   -2.5497   CATCGAAACACAAAA             GGAGGGC AAAAA GCCCTCC             CGTTTTCATCTTCAT  80 44
HC659_RS04020  800230 ..  800262 + -18.1  -5.10933   GTGTAATAATGTTCA      TCTTGTAGAAAAAAC AAT GTTTTTTCTACAAGA      TTTTATTTTAAATGC 100 81
HC659_RS04050  805661 ..  805686 + -13.4  -5.46629   AAAGCAAGGAAAAAA         CCAAAAGGCC AATGTC GGCCTTTTGG          TTTTTTTGCGGTCTT 100 39
HC659_RS04055  807113 ..  807135 +  -9.2  -5.32565   TAAGAAAGTGAAAAA           CACAAAGGGT GCT AACCTTTGTG           TTTTTTAATTAATTA 100 38
HC659_RS04060  808664 ..  808698 + -13.8  -4.23892   CTAGGAATATGGTAG     AAAGAAAAAGGCAGAC GCG GTCTGCCTTTTTTTTA     TTTTCACTCCTTCGC 100 26
        yflR NONE
        yflQ NONE
HC659_RS04075  812036 ..  812051 + -10.4  -5.52384   GACAGGAAATTAAGA              TCCCGG CATC CCGGGA               TTTTTTTCATGCCGA 100 28
        citM  813581 ..  813593 +  -2.7     -2.89   AACATTCCGGAGGTG                TCATT ATG AGTGA                TCCTTATATGCCGCT  42 76
HC659_RS04085  814381 ..  814399 + -11.7  -5.77677   TTATCGTCTATTTGA             CACCCGC ACCAC GCGGGTG             TTTTTTATTGTTTTC 100 26
HC659_RS04090  815738 ..  815749 +  -5.8  -4.56597   AAAATCTCGACACGC                CCGT CATC ACGG                 TTTTTGACCCAGCCG  72 173
HC659_RS04100  816595 ..  816618 + -11.7    -3.695   GTTGAATAGAAAAAA          GCCGCGCAT ATCAAC GTGCGCGGC           TTTGCCATATTTAAG  91 32
HC659_RS04125  819864 ..  819885 + -15.9  -5.42164   CTGTCAAATAAAAAA           GCGGAGAGG TTGC CCTCTCCGC            TTTTTCTTATTTATC 100 30
HC659_RS04135 NONE
HC659_RS04140  822506 ..  822530 +  -7.1   -5.0916   TTGGTCTGATCTGCA          GGATGGCGATT GAT AAAAGCCATCC          TTTTTATGTTCCAAG  90 41
HC659_RS04145  824043 ..  824056 +  -2.3   -4.3902   TAGTGCTTTGCTTTG               GCGCT GAAC AACGC                TTTGCTTTTTATGAT  58 38
        treP  829629 ..  829664 +  -4.7  -4.36595   AACATAAATAACAAG    TGGGGAGCGGG-ACGT GTTGA ACGTTCCCTTTTCCCG    TTTTCAATTTAAATA  68 30
        treC NONE
        treR  832123 ..  832144 + -12.3  -5.69793   GGGGAAATGAGAGAG           GCGC-CTGCC TGC GGCAGCGCGC           TTTTTTGTTTGGTAT 100 31
HC659_RS04185  832930 ..  832954 + -14.3  -5.64274   GGGTTTAAATAAAGA          AAGCTGCTCGC TTA GCGAGCAGCTC          TTTTTTTATGCCTGA 100 33
        yfkM  838117 ..  838136 + -11.4  -5.87996   AGAAATAAGAAAAAA            CGGACGCT CTTG GGCGTCCG             TTTTTTTGTTGCTTA 100 33
HC659_RS04210 NONE
HC659_RS04215 NONE
HC659_RS04220  841676 ..  841700 + -16.5   -4.8622   ACCATTAGCATAAAA          GCCTCCTGACA TGA TGTCGGGAGGC          TTTTTGATTAAGAAG 100 192
         cax NONE
HC659_RS04235  844980 ..  845000 +  -9.8  -6.08342   AAGATAAATAAAAAA            CTGATTCC AACTC GGAATCAG            TTTTTTTGTTTATTG 100 34
HC659_RS04250  847307 ..  847323 +  -6.5  -5.80364   AGATTGGGAATAAAA              CCGCG TGCCCGC CGCGG              TTTTTTTATTGGCAT  93 28
        pdaA  848200 ..  848231 + -17.5  -4.79683   CCGTCCTTGTAATGA      GAAAAGCCTCTCC TGAAAC GGAGAGGCTTTTC       TTTATTTTATACATT 100 29
HC659_RS04270  851200 ..  851220 +  -9.8  -2.55351   GAAAAAACCATTTCA            CTTTCTGC CATCC GCAGAAAG            CTTCATATAGAAACG  73 92
        rlmD  852687 ..  852728 +  -2.2  -4.72272   TAGTTTTCCTAATAA GACCTGGATTTCGGTA AAATAAACAA TTCCGATTTCCGGGTC  TTTTTCGTGCGCAGC  64 38
HC659_RS04280  853612 ..  853635 +  -7.5  -4.01597   TATCTTATGAGTGAA          GACTGC-GAC ATTTA GTCAGCAGTC          TATTTTATTGGTTCT  76 97
HC659_RS04285  855320 ..  855346 +  -5.9  -5.24129   AATTCTTGACTAAAA         TACCTGGATTT TCGGT AAATCCGGGTC         TTTTTTGTACGCAGC  83 91
HC659_RS04290 NONE
HC659_RS04295  856659 ..  856677 +  -8.8  -5.82316   TCGATCATTGTCAAA             GGCCGGGT GAT ATCCGGTC             TTTTTTTTGCATGCT 100 66
        acoA NONE
        acoB  858862 ..  858874 +  -3.3  -3.17075   CACGCTTGAATTGCT                TGGCG AGC CGGCA                TTGAATTAAAGGGGG  47 4
        acoC NONE
        acoL  861502 ..  861528 +  -9.4  -5.64873   ATAATAAAGGAAAAA         GCAGGCGCAT GGATATA AGGCGCCTGC         TTTTTTATTGTTGAA 100 37
        acoR NONE
HC659_RS04325  863664 ..  863686 +   -12  -4.77165   AGGATTAAACAAAAA           TGGCCCGCTT CAT AAGCAGGCCA           TTTTGTTATCCGCGC 100 33
HC659_RS04360  869226 ..  869277 +  -3.9  -2.85668   ATATCATAAATGAAA TTCCCCCATTTTCGAATCTGTAAT TGTAT ATAATAGAAA-GAAAATGGGGGGA TCTGATATGCAGCTC  46 32
HC659_RS04365 NONE
        malP  871653 ..  871670 +  -9.1  -4.55798   AATCAATAAAGACTG             CCCTCCT TTTC GGGAGGG              TTTTCGTTTGCCGTC  90 32
HC659_RS04375 NONE
HC659_RS04380  875281 ..  875303 +  -8.5  -5.80364   CCAATTTGAGAAATA           GACCTTTGT CCTGC ACAGAGGTC           TTTTTTTGTTACAGT 100 25
        catD NONE
        catE  876722 ..  876749 + -14.9  -5.98675   GTGATTTAACTGCAA        TCCCCTTGCCG AAATAA CGGCAGGGGGA         TTTTTTATTTTTGTC 100 32
HC659_RS04395  877798 ..  877809 +  -5.8  -3.79482   CATATGATAAAGACG                CGAG AAAT CTCG                 TTGTCTTATAATCTT  63 70
HC659_RS04400 NONE
HC659_RS04405 NONE
HC659_RS04410  881549 ..  881576 +   -10  -5.45802   AAATGAGGGAATGCG        CCGCATATGA CATAAAGT TCATATGCGG         TTTTTATTTTCCAGA 100 39
        lnrJ NONE
        lnrK  883555 ..  883569 +  -7.1  -5.52986   ACGCTTCTCTGAAAA               GGCCT TTTAC AGGCC               TTTTTTTCATGCCCT 100 60
        lnrL NONE
        lnrM NONE
        lnrN  886977 ..  886997 + -11.2  -5.50499   TCCGAGCCTAAAAAA            CATCTGCC GTTTA GGCAGATG            TTTTTTTGCATGTGG 100 30
        estB  888515 ..  888537 +  -3.4  -5.21709   ATCTTCAAAAAACAA           CCTGCTGT CTCCGTT ACAGTGGG           TTTTTTCGTCTGAGA  73 42
HC659_RS04450  889783 ..  889804 + -13.7  -3.34905   CAGGGTGAAAAACAA           GCGGCAGGG GGGC TCCTGCCGC            GTTTCTTTACTTCTC 100 33
        bstA  892422 ..  892434 +  -2.6  -4.27316   CTCGCATGAATGGCG                TCGC TTATC GCGG                TTTTGACTTCAGGAA  58 140
        mprF  897185 ..  897208 + -15.4  -6.01187   GGCAAAAGCAAAAAA          GACTCCGTCT AATA AGACGGAGTC           TTTTTTTATTTCGTT 100 14
HC659_RS04490  899313 ..  899330 +  -4.1  -4.20696   TCGCAAGAAGGGGGG             CGAAGCT ATGA AACTTCG              TTTTGGCGTTACTGC  61 15
HC659_RS04495  900360 ..  900385 + -13.5  -5.55664   TTCTTAATCGTTACA         CCCATTTTCTT AAAA AAGAAAATGGG          TTTTTTTGATAATGA 100 34
HC659_RS04500  901383 ..  901402 +  -6.6  -3.13906   AAGATGCACTTTCCG            TTATCATT ATGA AATGATAA             TCATTTTCAATTGCA  61 61
HC659_RS04505  902024 ..  902050 + -16.7   -4.8622   CTGAAATGTAAAAAA         CCCCTTGTCTC AAACG GAGACAAGGGG         TTTTTCATTAACGAG 100 30
        recX NONE
HC659_RS04530  904602 ..  904620 + -13.2  -5.27335   ATAAAGCGTAACGGG             GAGGCTGA TGA TCAGCCTC             TTTTTGTTTGCAGCA 100 30
HC659_RS04535  905931 ..  905951 + -11.2   -4.1023   AATAAAGGGTAAAAA            CAGCTGCA GTGTA TGCAGCTG            TTCTTCTTTACCGTT  89 29
HC659_RS04545  906509 ..  906530 + -10.1  -5.52347   CTTTTGCATTAAAAA           CCTGCCGTT AACG ACCGGCAGG            TTTTTTCATTTTCTT 100 29
HC659_RS04550  907172 ..  907189 +  -5.5  -4.71061   CAAATGCGATAAAAA             GGCAGGC CGAG GCTTGTC              TTTTTGCCTATGCAT  73 29
        spdL NONE
HC659_RS04560  908453 ..  908471 +  -9.6  -5.01546   AATTTCTCTCCATCC             GTCTGTCA TAA TGGCAGAC             TTTTTCTGTGCGTTT 100 46
HC659_RS04565  909664 ..  909675 +  -2.2  -3.51573   ACTGAAAATACCAAG                C-GCC ATT GGCAG                TGCTTTTTTTGCGTG  47 36
HC659_RS04570  912290 ..  912323 +  -8.1  -5.28826   TTTTATATAAGACGT     AAAAAGCCCGGCTCT ATAT AGAGCCGAGCTTTAA      TTTTTTCTGAAGTTT 100 5
        mutY  914674 ..  914684 +  -2.4  -3.38162   TCATTGCGCTTCATT                 CCGC CGC GCGC                 TTCAATTTCTTGCGT  45 88
        fabL NONE
HC659_RS04595  916019 ..  916043 +  -5.8  -5.56264   CTGAAACAGAAAAAA         GCACTT-CATC TTCG GGTGGAAGTGC          TTTTTTCTGTTTGAA  91 44
HC659_RS04600  916443 ..  916468 +    -9  -5.24291   GTGTAGTGCAGGAAT         GTGCCATTCC CCGGCC GGAATGGCTC          TTTTATTTTCATTTT 100 35
HC659_RS04605  917122 ..  917142 +  -6.9  -4.62336   ATGGTTACGTAAAAA            CCTGTTG CGGGGTA CAACAGG            TTTTTCACATGGGCT  81 40
HC659_RS04610  918946 ..  918975 + -11.7  -5.76633   GAACTAAAACATCAA       TCTTATATCCTTT TAAC GAAGGATATAAGA        TTTTTTTGTATATAA 100 34
         bcp  922218 ..  922231 +  -3.1  -3.09286   AAAAGTAAATCTCTA               TGAGC CTAT GCTTA                CTTTTACCCTGATAT  45 33
        perR  922769 ..  922807 + -13.4   -3.6834   AAAAAGAAAATCATT   AAAAATAAGCTGACCG CACGAAA CGGTCAGCTTATTTTA   TTTCGACATTTTCTT 100 24
HC659_RS04640  924331 ..  924350 +  -2.2  -2.65751   TAAATCAAAAAAACA            TTTGAC AAAAGAAA GTCAAA             ATGTTATATTGATAA  40 106
HC659_RS04645  926159 ..  926184 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
HC659_RS04650  929236 ..  929252 +  -2.3  -2.84587   AGTTTTGAGAGAATA              AGTTTTT CAA AAAAACA              CTTGATTTTCTCAAG  41 66
         rrf NONE
HC659_RS04660 NONE
HC659_RS04665  929574 ..  929586 +  -3.3  -3.25942   TCAACTCCGTCTCAA                GGGTT CGA ATCCC                TTGCTCTCCGCCACT  47 0
HC659_RS04670 NONE
HC659_RS04675 NONE
HC659_RS04680 NONE
HC659_RS04685 NONE
HC659_RS04690 NONE
HC659_RS04695  930134 ..  930144 +  -2.6  -3.83026   CTCTTGCCGGCACTG                 TTTT TTC AAAA                 TTTAATGTGGAGGGG  52 27
HC659_RS04700 NONE
HC659_RS04705 NONE
HC659_RS04710 NONE
HC659_RS04715  930517 ..  930529 +  -2.7  -3.09933   ACTTTTTATATCAAC                TGCAT ATA ATGTA                TTAAGTCCATTAAAA  43 42
HC659_RS04720 NONE
HC659_RS04725 NONE
HC659_RS04730  930789 ..  930823 + -13.8  -4.52142   AAGTCCGGCCCTCGG     CACCAATTTTACTTAC ATG GTAAGTTGAATTGGTG     TTTGTGTTTTATCAT 100 21
HC659_RS04735  931151 ..  931172 + -10.9  -5.44198   CGGTATACTGAAAAA           CCCGTTTCT TAAC AGGAACGGG            TTTTTATTATTTATT 100 36
HC659_RS04745  932345 ..  932376 +   -16  -5.00846   TGGAGCAATAAAAAA      GAGACGGCATCTCA TCTT TGAGATCCCGTCTC       TTTTTGTGGTCTTTG 100 30
HC659_RS04755  933654 ..  933677 + -11.8  -5.33785   TCTTTCTGACTGTAA          CCGGGTTCAT TTAT ATGAATCCGG           TTTTTTGTGCTGGTT 100 248
        thiC  935520 ..  935545 + -14.9  -6.06723   TATCAATAAAAAAAA         TGAAGATGGAG AATG CTCCATCTTCA          TTTTTTTTTAGAAAA 100 32
        senS  937349 ..  937366 +  -6.9  -4.84529   CTAAATATAAAAAAA             CCCGCTG ACTA CAACGGG              TTTTTGCATTTCTCC  83 18
HC659_RS04780 NONE
HC659_RS04785 NONE
HC659_RS04790 NONE
        ssuD NONE
HC659_RS04800  943648 ..  943664 +  -7.9  -3.63744   TGCATCATTAGAATG              GGCGGCT TCA GGCCGTC              TGTTTTACAAAGCGG  69 30
        rpsN  944032 ..  944057 +  -9.7  -5.85011   GCTGGTAAGAAAAAA         CTCCGGC-CGAT TAC AGCGCGCCGGAG         TTTTTTTCGTTTTTC 100 33
HC659_RS04820  945000 ..  945036 + -10.3  -5.71712   TACATACGTTATTAA    CGCAGTGTTTCGTTTCT CAG ATAAACGAAGTATTGCG    TTTTTTTATGTGAAA 100 40
        queG  946968 ..  946987 +  -5.8   -5.4251   AGCAGAAGGAAAAAA            CACTTGAGA TCA TC-CAAGTG            TTTTTTCTCTATAAA  89 52
HC659_RS04835 NONE
        trmL  948471 ..  948493 + -15.6  -5.42862   TAAAATAGTGAAAAA           CCCGCTCATC GAT GATGGGCGGG           TTTTTTTGCGGATGT 100 33
HC659_RS04845 NONE
HC659_RS04850 NONE
HC659_RS04855  950676 ..  950697 + -12.3  -5.77677   TCTGTTATACAAAAA           GGGTGCTCT TTCA GGAGCACCC            TTTTTTATTCTTTTC 100 49
        prkA  952904 ..  952928 +   -10  -4.46581   AACCGATAAGCAACG          TGACCCGTCC GAATA GGGCGGGTTA          TTTTGTCCCATTTTC  91 32
        yhbH  954262 ..  954275 +  -5.2  -6.25578   TTTTCGTAATGAAAA               GCCC ATTTCA GGGC                TTTTTTTTATTTAAT 100 32
HC659_RS04870 NONE
HC659_RS04875 NONE
HC659_RS04880 NONE
HC659_RS04885 NONE
HC659_RS04890 NONE
HC659_RS04895 NONE
HC659_RS04900 NONE
HC659_RS04905 NONE
HC659_RS04910 NONE
HC659_RS04915 NONE
HC659_RS04920  962021 ..  962052 + -17.6  -3.31144   TTGCAAACTAATAAA      TAAAGCTGTTTTGC ATAA GCAAAACAGCTTTA       TTGTCAAAATAAAAA 100 30
HC659_RS04930  963559 ..  963585 + -11.8  -5.93809   TCTTTCAGATTGGAA         GAATGAATTCGA ACA TTGAATTCATTC         TTTTTTTTCTGAAAA 100 7
HC659_RS04940  966234 ..  966259 +   -12  -5.40072   CGTAACATATGAAAA         CGTGTAATCC AAACAA GGATTACACG          TTTTTTTAACGGCCG 100 36
HC659_RS04950  967440 ..  967458 + -14.6  -5.33026   GAATAAATAAAAAAA             GCCGCACA ATT TGTGCGGC             TTTTTCTTTGCGTTA 100 35
HC659_RS04955  968700 ..  968719 +  -2.2  -3.90318   CAGCATAGAAGCTTG            TGCTTT AATCGCGC AAAGCA             TTTGTCGGCTGATGA  53 206
        yhcR NONE
HC659_RS04970  973437 ..  973456 +   -10  -4.71426   CGAGTGACTTAAAAA            GCCG-AGGC AGT GCCTGCGGC            TTTTCTTCATGAAAA  91 29
HC659_RS04980  974889 ..  974914 + -13.5  -4.96848   ATAATCATGTGGCAA         GAGCTTTTCTA TTTT TAGAAAAGCTC          TTTTTGTATCAGAGA 100 37
HC659_RS04985  975444 ..  975464 + -11.9   -4.1822   TTCATTAATAAGAAA            GAGCTTGCA GTG TGCAGGCTC            TTTCTTCACATAAAA  93 33
HC659_RS04990 NONE
HC659_RS04995  977795 ..  977812 +  -9.8  -5.00616   ATAATTCCCAAAAAA             CCCGCC TGAATT GGCGGG              TTTTTTAAAACAAAA 100 37
HC659_RS05000 NONE
        glpP  980257 ..  980267 +  -4.6  -4.46576   CAAATGTTTATGCAC                 CCGT AAA GCGG                 TTTGTTGTGGTTTTT  66 123
        glpF NONE
        glpK  982727 ..  982775 + -21.4  -5.19879   GTCCTGAGATGAGGA GAGACCACAGCA-CCAAAGTGTA AGCA TGCACTTTGGCTGTTGTGGTCTC TTTTTCTATTTACCG 100 81
HC659_RS05020  984484 ..  984507 + -15.4  -4.89063   TTGAGCAATAAATCA          TAACGGGCTG TCTG CAGCCCGTTA           TTTCTTTTTACGTGC 100 30
        pgcA  986368 ..  986392 + -13.7  -5.69262   ATAATTCAAGTATGA          GCTGGGTCATT GTA AATGATCCAGC          TTTTTCTTTTTCTCA 100 37
        yhcY NONE
        yhcZ NONE
HC659_RS05040  988797 ..  988818 + -15.9  -4.62441   CGCAAAAACAGGAAA           TCCCGGCGT CTAA ACGCCGGGA            TTTGTTTATGTGAGA 100 13
HC659_RS05050  989598 ..  989622 +  -5.6  -4.55887   GGCTCTAATAAAAAA          CTGTACAGCC GTTAA GGCCGCACAG          TTTCTGTTTTTAGAA  73 33
       spoVR  994900 ..  994919 + -12.2  -5.46706   TATTTATAAAAAAGA            GGATGCAG CGTT CTGCATCC             TTTTTATTTTCCAGT 100 32
        lytE  997856 ..  997873 + -11.3  -5.63103   AATTTTTAGAGAAAA             CCCGTTC ATTG GAACGGG              TTTTTTTCATTAGAC 100 39
HC659_RS05090  999975 ..  999985 +  -5.4  -2.99972   AATATACTGGTGCCA                 TTCC CGA GGAA                 GTTCTTTCATAACAT  53 3
HC659_RS05095 1000952 .. 1000967 +    -9    -5.626   GTAATCAACGAAAAA              CCAGCT CTAG AGCTGG               TTTTTTTGTGCGGTA 100 37
        bcaP 1002599 .. 1002623 + -11.4  -4.79752   TAACCTTTTGATAAA          GAGAGCGTCC ATACA GGCCGCTCTC          TTTTCTGTTCTTGGC 100 38
HC659_RS05105 1004066 .. 1004087 + -13.7  -5.68438   ATCATTTTAAAAAAA           CAGGCTCCG TTTC CGGGGCCTG            TTTTTTATTTAATAA 100 31
HC659_RS05115 1006048 .. 1006065 + -11.3  -5.00616   AACCGGTATAAAAAA             GACGCCT GAAA AGGCGTC              TTTTTTAAAAGCCAA 100 30
HC659_RS05135 1009103 .. 1009122 +   -10   -4.7416   GGAAATGTAACAAAA            GCTGAGGG CGAA TCCTCAGC             TTTTTGGCGTTTTAA 100 31
HC659_RS05140 1009873 .. 1009890 +  -9.9  -5.24416   GTGAAAATAAGAAAA             GCACCTT ATAC AAGGTGC              TTTTTATTATGCTTC 100 67
HC659_RS05155 1013077 .. 1013101 +  -8.7  -4.96848   AGAAGGCAAAGAAAA          GAAAACAGTTT TCA AGGCTGTTTTC          TTTTTATATCCGCAA 100 40
HC659_RS05160 1014758 .. 1014782 +  -7.2  -5.84432   TGCTGAACAGTGCAA          CCTTGAGC GAGAAATAA GCTCAAGG          TTTTTTTATATTGTG 100 9
HC659_RS05180 1016638 .. 1016656 + -17.4   -4.4767   TGAATTGAGAAATGA             CCCCGGCG TTT CGCCGGGG             TTTTGTGCTGCATAA 100 68
        mscY 1017866 .. 1017890 +  -8.6  -4.77036   CGGGCTTAAAAGAGA          GACTTCGTCT GACAG AGGCGGAGTC          TTTTTCATGGTAAAA 100 32
        srtN 1018669 .. 1018691 +  -9.1   -5.5112   TTTGGGCATGAAAAA           GTGAGCCGC TTTAT GCGCCTCAC           TTTTTTATTCATGAA 100 22
         dat 1020692 .. 1020716 +  -7.9  -5.75538   AATGAACGAAGAAAA         GAG-CCCGCT TTTTAC AGCGGGGCTC          TTTTTATTTTTTAAC 100 40
HC659_RS05215 NONE
        bmrC NONE
        bmrD 1026940 .. 1026961 + -11.7  -5.07011   ATAATGCTCAAAAAA           CCCAAAACA ATCG TGTTTTGGG            TTTTTGGTTTATGTA 100 37
HC659_RS05260 1032572 .. 1032586 +    -5  -3.51785   GCAATGATGAAAGGA               GCTATT TAC AATGGC               TGTTAATTTTTATGA  57 108
HC659_RS05265 1032945 .. 1032966 + -11.7   -5.5604   GGCTAATAAGCAAAA           TCCCTTCTT GGAT AAGAAGGGA            TTTTTTATTCATTCA 100 35
HC659_RS05275 1035409 .. 1035437 + -11.7  -5.03145   AACGTGTGTAAAAAA       GCCGCTCGCGCC CTGACA GGTGCG-GCGGC        TTTTTTGCCGGATTG 100 30
HC659_RS05280 1037012 .. 1037033 + -14.5  -5.65177   TGAAAAAACGACAAA           GCAGCACTG ATTA CAGTGCTGC            TTTTTTTATCCCTGT 100 16
HC659_RS05300 1040101 .. 1040143 + -12.3  -2.54896   AAGCGTAACAGATCA GCCGGAAAGCTGATCATCTGT GAA ACAAA--ATCAGCTTTCCGGC TGCATTGACTAAACG  82 33
HC659_RS05310 NONE
HC659_RS05315 1042583 .. 1042604 + -12.3  -4.67607   AAACTGATTGGAAAA           CAGCCTGGG GATT CTCAGGCTG            TTTCTTTATTGACAG 100 34
HC659_RS05320 1043909 .. 1043919 +  -2.4  -3.63305   TGCTTGATACATGAG                 GCGG TGA CAGC                 TTTGCGAATTATATC  47 27
        sbcE 1046779 .. 1046795 +  -5.2  -2.78463   TGCATTTCATAGCAG              CCAAAT CATCC ATTTGG              TGTCATAAAAGAGGT  50 1
        yhaM 1047830 .. 1047859 + -11.6  -4.76644   TAAATAACTTAAAAA       GGACTGATGCTGA CATAT TCAGC-TCAGTCC       TTTTTGATGCGTCTT 100 34
        yhaL 1048164 .. 1048190 + -22.4  -6.01369   CATCGCATAAAAAAA         GCTGTGCGGCTC AAT GAGCCGCACAGC         TTTTTTTATTATTTA 100 31
       yhzE1 1049333 .. 1049357 + -10.8  -4.68908   TACTAAGCAGCCCGA          GGATCGCTTG CAACA TAAGCGATCC          TTTATTTTCACTAGC  95 35
       yhzE2 1049548 .. 1049574 + -15.3  -4.59293   AATCAACATAAAAAA         GCATAGCTGCT TAATC AGCAGCTATGC         TTTCTTTCGTATTTA 100 39
HC659_RS05365 1051081 .. 1051096 +  -6.8  -2.79302   TTTCCATAAAATCAT              CGCCGT AGAT ATGGCG               TATCATACACATCAT  55 162
HC659_RS05380 1052445 .. 1052466 + -10.1  -4.53705   CTCTGTTCAAAAAAA           CCTCTCCCG GAAG CGGAAGAGG            TTTTGTGTGACAATT  91 64
        ecsA NONE
        ecsB NONE
HC659_RS05410 1057952 .. 1057977 + -11.9  -5.64274   GGATATTAAAGGAAA         CAGCCGGAG AATAAACA CTCCGGCTG          TTTTTTTATAGCTGA 100 12
HC659_RS05435 NONE
        hemE NONE
        hemH NONE
        hemY 1067446 .. 1067465 + -10.7  -5.58454   TTTATTCAGCTAAAA            CCTCCGC TTTATC GCGGAGG             TTTTTTTGATGTGCA 100 28
HC659_RS05455 1068147 .. 1068171 +  -4.4  -4.32857   TTGTATGTTGTCAAA         GGATTGTC-AG CGAA CTAGATAATCC          TTTCTCTTTGCAAGA  63 8
HC659_RS05460 1070570 .. 1070595 + -13.5  -5.83226   CTTCATAAAGAAAAA         GAACTTGTTTC CTTG GAAACAAGTTC          TTTTTTTGTTACATT 100 33
HC659_RS05470 1072614 .. 1072629 +  -6.2  -5.34365   GTGTTTTTTACAAGA              GAAACA ATGG TGTTTC               TTTTTCTTCTTCTCG  91 155
HC659_RS05480 NONE
HC659_RS05485 1074361 .. 1074386 + -17.6   -4.4078   TTAAAGATTAAAAAA         GCCTGCGGGG CAAGAA CCCCGCAGGC          TTTTCATTAACCAGA 100 30
HC659_RS05500 1076981 .. 1076991 +  -2.4  -2.77135   TGTGGGAAGGATAAA                 GGAG GAG CACC                 ATGTTATTTATAGAC  41 27
HC659_RS05505 1077995 .. 1078019 +  -2.2  -4.63527   TTTATTAAGGCAAAA         CACAAC-GTTT GAAA GAGCGGTTGTG          TTTTTGAAATAATGG  61 33
HC659_RS05510 1078706 .. 1078731 +  -6.2  -5.90231   CTATGACAGTACTGA         CACTC-AGGGC TTTTT GCTCTTGAGTG         TTTTTTTCTGTTTCT  93 35
        lcfB 1080358 .. 1080390 +   -18  -4.26079   TTTGCCCCAATAAAA      TGAAAAAGCGAAGC GGTTA GCTTCGCTTTTTCA      TTTTCAATCCTTTGC 100 28
HC659_RS05525 1082222 .. 1082247 +  -9.1  -4.93316   GCTGACAAATAAAAA         GAAGCAGGT ATGGAGGA ACCTGCTTC          TTTTTACTATTATTG 100 29
HC659_RS05535 NONE
HC659_RS05540 1085358 .. 1085387 + -11.6  -5.24129   GCTTTAACAGGATCA       GCTTGCAGAGAA TGTTAT TTTTCTGCAAGC        TTTTTTGTGGACAGG 100 34
HC659_RS05545 1086545 .. 1086562 + -11.3  -5.39905   AGAAATAAAAGAAAA             GACAGGC AAAC GCCTGTC              TTTTTCTTATTTGAT 100 33
HC659_RS05580 1094395 .. 1094415 + -14.1  -3.71888   AACGGATAATAAAAA            GCCAATCCT TGA AGGATTGGC            TTATTCGCTCTGCTT 100 32
        comK 1095532 .. 1095556 + -11.4  -3.74251   TTAGAAAAATAGGAA          GGAGCTGACC GAACA GGGCAGCTCC          TTTCATAAAGCTATG  91 37
HC659_RS05600 1096954 .. 1096991 + -15.3   -2.8294   CCTGTGAACGGTAAA   TAAGAAAAAGCAATCTGG TGT CCAGATTGCTTTTT-TTA   TGCTTATGCAGCCTG 100 27
HC659_RS05620 NONE
        lepB 1100600 .. 1100617 +  -7.1  -2.51393   GAGCTATAATCAAAA             TTGTTAC CTAT GTAACAA              AATTTATATATTTTT  60 111
HC659_RS05630 1102196 .. 1102206 +    -4  -3.88498   CAGCCGAGTATAATT                 CAAT TCA ATTG                 TTTCATCTGTAACAA  56 28
HC659_RS05635 1102794 .. 1102827 +  -7.5  -5.53079   CCCGAGCATTTTTAA     ATAAAAAACACGCAC TGCG GTGCGTGTTTTTCGC      TTTTTTCTATCTTTT 100 22
        ntdR 1108712 .. 1108738 +    -3  -5.44119   TTTCCCCATCTCGAT         GGTTTGCGAATT AAA AGTTCTTGAACC         TTTTTTTCAACTAGG  77 202
HC659_RS05675 1113060 .. 1113081 + -10.2   -5.0538   CTGTCCAAATAAAAA           GAGGGTTC TTTTTT GAACCCTC            TTTTTTACGCTGCCA 100 29
        addB NONE
        addA NONE
HC659_RS05700 NONE
        sbcC NONE
        hlpB 1126296 .. 1126322 +  -8.8  -4.51196   AAAAATGACTAAAAA        GCAGCC-CTCT CTTTGC AGAGCGGCTGC         TTTTATCCGTTTCCA  90 33
HC659_RS05755 1130990 .. 1131011 +  -4.3  -5.32882   GCTGAATAAAACTGG           AGGGCGG ACCCGGAC CCGCCCG            TTTTTTCTGATAATC  81 36
HC659_RS05760 1131468 .. 1131490 +  -7.7  -5.90231   AGAAAAACCTATGAA           CCCGGCTCT TTGAT AGAGTTGGG           TTTTTTTATATTTAT 100 42
        wprA 1134311 .. 1134329 + -11.7  -5.63517   AAAAGTAACCAAAAA             GCGGTGC TCGAT GCACCGC             TTTTTTATTTGCGCC 100 33
        asnB 1136957 .. 1136993 +  -6.1  -5.24129   AGATTTAAATAAGAA   GGATAGAT-GAGCA GGGAAATATA TGCTCTATCTATCC    TTTTTTGTACAACGC  83 77
        farP 1138576 .. 1138596 +  -6.8  -3.03243   GATATCTAAAAAACA            CCCGGC CTTGATTGA GCCGGG            TGTTACGCCATACCT  60 32
HC659_RS05795 NONE
        degA 1141986 .. 1142001 + -10.4  -5.32944   CGCTCAACACATGAG              CCCGCT AATG AGCGGG               TTTTTTCATTATGAC 100 27
        iolX 1143261 .. 1143283 +  -4.8  -4.52142   TTTCCGCAAAAAAAA           GCAAGGAC ATTTTTA GCCCTTGC           TTTCTCTTTTCTCAT  68 65
HC659_RS05820 1146404 .. 1146417 +  -5.9  -3.76402   TGTGAATGACAGCCC               CGCTG AAAT CGGCG                TTTGATAAATCGCAT  61 413
HC659_RS05830 1147682 .. 1147697 +  -6.1  -5.42131   ACTCATAAGAAAAAA              CCCGA CATTGA TCGGG               TTTTTTATATAATTC  89 33
HC659_RS05850 1151153 .. 1151163 +    -4  -2.55361   CAACGATAGAGAGGG                 TCAT AAT ATGA                 ATGATTTTTCACTAG  45 15
HC659_RS05855 1151929 .. 1151959 +  -8.3  -2.96205   TGTAAAATAGCGGCT      GCGG-GGCTCTCGT CGTG AAGAGAGCCTCTGC       CTATTATTTTTTATG  67 36
HC659_RS05895 1160233 .. 1160265 + -17.8  -5.76633   AAAATAGCATGAAAA     CGGCTCGC-CTGCAG CAGA CTGCGGAGCGAGCCG      TTTTTTTATGTCTAG 100 34
HC659_RS05915 NONE
HC659_RS05920 NONE
HC659_RS05925 1163736 .. 1163765 + -13.7   -5.0133   AGTAGAGTAGAAAAA       GAAGGGCAGAG CGAAATAT CTCTGCCCTTC        TTTTTTGGGAAAATA 100 31
        nprB 1165480 .. 1165531 + -24.3  -4.63218   GCTGTCGGCATTCTA TGAGCAAACAAAAACAGTCAGGAC ACAGA GTC-TGACTGTTTTTGTTTGCTCA TTTTCTTAAAAAGAA 100 23
HC659_RS05940 1167373 .. 1167391 +  -5.2  -3.45023   TGACGAAAGCAGGTG             GAAGTCGT GAA ACGGCTGC             TTGTGATGCTCCTCC  55 38
HC659_RS05945 1167837 .. 1167859 + -17.8  -5.80364   TGAAGTCAAATAAGA           GGCTATGGCG AGT CGCCATAGCC           TTTTTTTATTGGAGT 100 28
HC659_RS05965 1170010 .. 1170024 +  -2.8   -2.6563   TGAATGGTTTGAAAC               GTACTT ATA AAGCAC               TAAGTTATTAACAAG  41 16
HC659_RS05970 1170401 .. 1170426 + -11.9  -5.03314   CAATAAAACAAAAGA         GGACAGCCTGA TATG TGAGGCTGTCC          TTTTTTACAGCTGAA 100 35
HC659_RS05975 NONE
HC659_RS05980 NONE
HC659_RS05985 1172649 .. 1172669 + -15.5  -5.61596   TGATGATGATGAAAA            CAGGCTGAC GCG GTCAGCCTG            TTTTTTTATGCGGCT 100 18
HC659_RS05990 NONE
        argJ NONE
        argB 1175918 .. 1175934 +  -5.1  -3.91716   GTCAAAGCAAAGGAG              GCTGTTT CAT GAGCAGC              TTGTTTCAAACCTAC  61 14
HC659_RS06005 1177068 .. 1177082 +  -3.5  -4.08666   AATCGCTCATCATTC               CGCTG TAAAC CAGTG               ATTTTTTTTCGATAT  57 10
HC659_RS06010 NONE
HC659_RS06015 NONE
        argF 1182241 .. 1182261 + -11.2  -5.52384   GGAATCATCAAAAAA            CTGCTGAG CCAAA CTCAGCAG            TTTTTTTGATGGGAA 100 19
HC659_RS06025 1182524 .. 1182546 + -10.7  -4.92239   GTGACCACTAAAAAA           CCCAAAACA ATAAA TGTTTTGGG           TTTTTGGCTTTTTAA 100 37
HC659_RS06035 1183742 .. 1183765 +  -8.8  -5.07652   CGAATATAATGACAA          CAGCCTTCTC TTTT GCGGAGGCTG           TTTTGTTTTGGGAAA 100 41
HC659_RS06040 1184452 .. 1184467 +  -3.2  -3.48981   AAAGGAGTTGAACAT              GACTTG ATCA CAAGGC               TTGTCATGATCTTTT  50 112
         med NONE
HC659_RS06050 1185621 .. 1185640 + -10.8  -4.18697   ACAGAATAAGAAGAA            GCCACTTT TTTG AAAGTGGC             TTTTCACATGATTTT  90 32
        fabH NONE
        fabF 1188261 .. 1188285 + -17.9  -6.02914   CATAATCAAGCCAAA          CCGGCTGCCCT TAA AGGGTAGCCGG          TTTTTTTTGTGTGCA 100 36
HC659_RS06070 NONE
        appD NONE
        appF 1191252 .. 1191263 +  -2.2  -2.96164   GCTCCCAGCCACTTT                GTGG CTTG TCAC                 CTTTATAGCTAATGT  42 2
HC659_RS06085 1193010 .. 1193031 + -10.9  -4.11027   ATTTCCCTTAAAGGG           GAGGGAGAG CGTT TTCTCCCTC            TTCTGTTTTTAATAA  89 41
        appB NONE
        appC 1195116 .. 1195128 +  -3.4  -4.84359   TATCCCTTGCCTATA                CTGT GGACA ACAG                TTTTTATAAAAGTGA  67 193
HC659_RS06100 1195913 .. 1195932 + -12.2  -5.14965   GTCAACTGAAAAAAA            CCGCTCTT TGCA AAGAGCGG             TTTTTTGATCAGCGT 100 32
        oppA 1199344 .. 1199372 + -13.3   -4.2704   AATAAAAGACCTCAA        GGTATATGGGG AGAAAAG CCCCATATACC        TTTCTTACTGATGGA 100 54
        oppB NONE
        oppC NONE
        oppD NONE
        oppF 1203288 .. 1203313 + -12.7  -5.48825   TTCATGATTCATCAA         TCCTTCAAGAG ATTT CTCTTGAAGGG          TTTTTTTGCGTCCTC 100 34
HC659_RS06135 1204623 .. 1204639 +  -3.6  -4.72272   ACACTTCAAAATGAA              CGGAGC AGCTG GCTCGG              TTTTTGCTGAAAAAA  69 44
HC659_RS06140 NONE
         spx 1205937 .. 1205968 + -13.2  -4.60487   AATAGATCGTATCAT      CAAAAGAAGGCTGA GTCA TCAGCCTTCTTTTA       TTTTTCAACCTGCTG 100 39
HC659_RS06155 NONE
        mecA 1207560 .. 1207581 + -13.1  -5.93809   TTGCATCATAGCAAA           CCGATTTCC TTCC GGAAATCGG            TTTTTTTTATGCACG 100 30
        coiA 1208930 .. 1208941 +    -3  -3.00145   TGAAAGGCACAAAAG                GAAA GGTT TTTC                 GTGTTTTTACTGCTT  43 88
        pepF 1210935 .. 1210959 + -12.9  -5.01732   GTCTTAAAAAAGTAA          GCCTGTGCG GAAATGA CGCACAGGC          TTTTTTAAAACCCTT 100 34
HC659_RS06205 NONE
        yjbM NONE
HC659_RS06215 NONE
HC659_RS06220 1217191 .. 1217213 +   -15  -5.36441   AGAAAACTGATAAAA           GGAGAGAATC ATT GATTCTCTCC           TTTTTTATATGGGGC 100 11
HC659_RS06230 1220227 .. 1220250 + -11.8  -6.09196   TATGCCAATTCCAAA          CCACTTTTCC TTGC GGGAAAGTGG           TTTTTTTATTTTCAG 100 221
        tenA NONE
        tenI NONE
        thiO NONE
        thiS NONE
        thiG 1223621 .. 1223635 +  -6.4  -2.87132   AACGGCAAGCAGTCC               GGGAGA AGG TCTTCC               TGTATGACAGGCAGG  58 4
HC659_RS06260 NONE
        thiD 1225482 .. 1225506 +   -13  -4.37711   TAAATACAAGCCGAT          GAGATCACCA GCTGA TGGTGATCTC          TTTTGCGTTTGCTAC 100 24
        fabI 1226412 .. 1226432 + -11.2  -5.82036   CAGGATCTATTTCAA            GCAATCCC GAATA GGGATTGC            TTTTTTATTTCTTCT 100 42
        cotO 1227194 .. 1227220 + -10.8  -5.08824   ACGAAAAAGAAAAAA         GCTGCCCGGC TGATGTT GCCGGACAGC         TTTTTTACATAGAGA 100 40
        yjcA 1230561 .. 1230589 +  -9.8  -5.40072   GCCTCAATAGCCTGG       CAAAGAAACCGGA GAAC TCCGGTTT-TTTG        TTTTTTTAACGGGGC 100 225
HC659_RS06310 NONE
        yjcZ 1231088 .. 1231115 + -16.4  -3.31937   TTTAAGATGTATTGA        GGAAGTACGGGT TATA ACCCGTGCTTCC         TTGCCTTGTGTTTAT 100 36
      spoVIF 1231515 .. 1231534 +   -15  -2.50016   TTTTTACAGTAAAAA            CCCGGCAG TAAT CTGCCGGG             CTGTTAATGATGCAA  95 76
HC659_RS06330 1234193 .. 1234212 +    -5  -5.71712   GATATGTATAAAAAA            CCGTTC ATACGAGA GAACGG             TTTTTTTATATGCAG  88 30
        metI NONE
        metC 1238601 .. 1238638 + -15.2  -3.75024   CCAGTTGCGGTTCGT   TAA-AAAAGAAGCCGGG GATGG CCCGGCTTCTTTTATTA   TTGTTCGTCATCAGG 100 23
HC659_RS06370 1240696 .. 1240712 + -12.3  -5.38497   GAATCATAGCTTAAA              CCCTTGC GTA GCAAGGG              TTTTTTACTTTGCCT 100 33
HC659_RS06430 1248185 .. 1248199 +  -3.6  -4.36089   TTTTCTATTTAATAT               TTTTTG AGA CGAAAA               TGTTTTTTTAAGCTG  63 122
HC659_RS06435 1249150 .. 1249182 + -12.2  -4.72497   AACTTGAAGCGAAAA     TAAGGTCCCTTCTCT TTTT AGAGG-GGGACCTTA      TTTTATTCATGCATG 100 95
        manR 1252076 .. 1252093 +  -7.7  -6.41881   TTTGGATTATTAAAA             GCAGGGA TTAT TCCTTGC              TTTTTTTTTGTTATA 100 28
        manP NONE
        manA NONE
HC659_RS06460 1255795 .. 1255821 +   -16  -2.72049   GGTAAATAATCCAAA         CAAAAGCAGGCG CAG TGCCTGCTTTTG         TAATTAAGGACTCTA 100 32
        ybaK 1257687 .. 1257707 +  -6.2  -4.60041   TAGGGGAACGAAAAA            GCTTAGTC ATATC GATTAAGC            TTTTTCCGCATCCCT  76 50
HC659_RS06515 1263862 .. 1263880 +  -3.7   -4.8622   TTCTACATGAAAAAA             GCGTCAC ATACA GCGGCGC             TTTTTGATTCCCAAA  69 31
        fdhF NONE
HC659_RS06535 1268603 .. 1268627 + -13.6  -5.14563   GAGATTGACCTCCCA         CCCGAGC-GGC TTCA GCCAGCTCGGG          TTTTTTGATGAAAAG 100 33
HC659_RS06540 1269449 .. 1269478 + -14.5  -5.24129   ATGCTAATTTACAGT       TGCACGTTTTTCA TCTG TGGAAAACGTGCA        TTTTTTATAGCGAAA 100 41
HC659_RS06545 1270584 .. 1270594 +  -5.4  -3.72984   AGCGGTGCAATTGAA                 TCCA TAT TGGA                 TTTGCGTGCTTATGC  60 435
        yjiB NONE
HC659_RS06560 1273239 .. 1273259 + -12.7  -4.80455   GTAAAAACATAAAAA            CCGAAATCA ATT TGATTTCGG            TTTTCTGTTTAAATA 100 37
HC659_RS06570 1274458 .. 1274481 + -13.2  -4.64591   TAACAAGTACAAAAA          GCCGCTTTTC CCTC GGAAAGCGGC           TTTTGTCTGTCATTC 100 38
HC659_RS06590 1277903 .. 1277915 +    -2  -4.52502   AGAGAGTAAAGGATT                TTGA CTTAT TCAA                TTGTTTATTTTTAGA  58 210
HC659_RS06595 NONE
HC659_RS06600 1279764 .. 1279808 + -13.9  -5.90231   CCTTTTAATGAATCT GGCATTGCCA-AAAGCATTC CTTTCC GAGTGCTTTCTGGCAATGTC TTTTTTTATGTTTAT 100 42
        uxaC NONE
HC659_RS06610 1282831 .. 1282841 +  -2.6  -2.95102   ATATAATATAGAGAA                 TATT TAA AATA                 ATTTGTAAATAAAAT  43 43
        allD NONE
HC659_RS06620 NONE
        uxuA NONE
HC659_RS06630 NONE
HC659_RS06635 NONE
HC659_RS06640 1289299 .. 1289319 +    -4  -4.06419   CGATTGACGACGTGA           TGTCCCGTT TTTC AGCGGG-CA            TTCTTTATACAGAAA  58 26
HC659_RS06645 NONE
HC659_RS06650 1292316 .. 1292338 +  -9.2  -3.82604   GCTATAATAAGAAAA           GGCTATCC TTCAAGC GGATAGCC           TTCTTCATTAAATCA  83 34
        yjoB 1295225 .. 1295249 + -10.8   -5.4756   TTTCACTAAAAGAAA         GCACGGGTGTT TGAA AAC-CCCGTGC          TTTTTTGTTGCGGTT 100 32
        rapA NONE
        phrA 1296636 .. 1296649 +  -8.1  -5.80003   TGATGCATAAAAAAA               GACCC TTAG GGGTC                TTTTTTATTTCTTCA 100 38
HC659_RS06685 1297992 .. 1298015 + -15.4  -4.19953   AGCTGTAAATGAAAA          GACGGAAGCT GTGA AGCTTCCGTC           TTTTCGCCTTACATA 100 33
HC659_RS06695 1299085 .. 1299096 +  -2.2  -4.42386   CGATATGTGGAAGCC                GTCA AGCT TGGC                 TTTTATAAATAAAAC  58 2
HC659_RS06700 1300032 .. 1300056 + -12.2  -4.21465   GTTAGGTTCTCTTCT          GGGCTGAGGA ATATA TCCTTAGCCC          TTATTTGATTTTGCC  93 36
HC659_RS06715 NONE
HC659_RS06720 NONE
HC659_RS06725 NONE
HC659_RS06730 NONE
        xkdD NONE
        xtrA 1303879 .. 1303924 + -19.3  -5.63517   AAGACGGAAAGCCTG CGGACACTGATCAACTGCACAG CAT TTGTGC-GTTGATTGGTGTCCG TTTTTTATTTGCCAA 100 61
HC659_RS06745 1304517 .. 1304536 + -11.4  -4.42386   TAGCATGACACATAA            GCGGCTGG CTGA TCAGCCGC             TTTTATGAATAGACA  95 74
HC659_RS06750 NONE
HC659_RS06755 NONE
HC659_RS06760 NONE
HC659_RS06765 NONE
HC659_RS06770 NONE
HC659_RS06775 NONE
HC659_RS06780 NONE
HC659_RS06785 NONE
HC659_RS06790 NONE
HC659_RS06795 NONE
HC659_RS06800 NONE
HC659_RS06805 1313758 .. 1313780 +   -15  -5.03314   GAATCAGCCCATACG           CAGACCTTTC TCA GAAAGGTCTG           TTTTTTAAAGATGAA 100 49
HC659_RS06810 NONE
HC659_RS06815 NONE
HC659_RS06820 NONE
HC659_RS06825 NONE
HC659_RS06830 NONE
HC659_RS06835 1320368 .. 1320386 +  -4.5  -5.28942   TAAGGTATAGACAAA             CCGCTTC AGTAC GAAGGGG             TTTTTATTTAGCATG  81 31
HC659_RS06840 NONE
HC659_RS06845 NONE
HC659_RS06850 NONE
HC659_RS06855 NONE
HC659_RS06860 NONE
HC659_RS06865 NONE
HC659_RS06870 NONE
        xepA 1326176 .. 1326189 +  -3.8  -2.65815   CATAATAGTCTCGGC               CCTC GGAAGG GAGG                TGATCTGCATGTGAA  45 36
HC659_RS06880 NONE
HC659_RS06885 NONE
HC659_RS06890 1327682 .. 1327708 + -13.8  -5.64873   TGATCAAAGACCATA         AAAATCCCGGAG CCG CTCCGGGATTTA         TTTTTTCTTCTTCAA 100 38
HC659_RS06925 1333531 .. 1333553 +   -17  -5.79595   AATTGTGATTCATTT           GCCTTCCGGC GCC GCCGGAGGGC           TTTTTTATTTTGGGA 100 40
HC659_RS06930 NONE
HC659_RS06935 1336876 .. 1336900 + -17.9  -4.95155   TGTCATAACCTCAAA          CCCCCTGTCCG TAA TGGACAGGGGG          TTTTTATGCTCTGAG 100 33
HC659_RS06950 1339730 .. 1339749 +  -7.2  -5.84381   TTGGTAAACAGACAT            GAATCCTT GAAA GAGGATTC             TTTTTTTATTACTGA 100 24
        dppA 1340663 .. 1340674 +  -4.4  -2.64099   CATGACTGAGCTTGC                GATG CGGA CATC                 ATTCTGCTAAAGGGG  47 4
        dppB NONE
        dppC NONE
        dppD NONE
        dppE 1345271 .. 1345312 + -13.3  -3.68324   CTGATGGCGGTGATT GAAGAAATACTGCTTCTTT ATGC GAAGGAGCGGTATTTTTTC  TCTTTCTTGCACGTA 100 37
HC659_RS06980 NONE
HC659_RS06985 NONE
        eepC NONE
HC659_RS06995 1349300 .. 1349327 +  -8.5  -2.60809   TAAGATAAATAAAAA        GAGTGGCTC CTTTTTACTA GAGCCACTC         CATTTGTTTATACTT  65 33
HC659_RS07010 1352021 .. 1352043 + -10.7  -5.77632   TTGGTGAACGTTAAA           CCCAAAACA TAAGT TGTTTTGGG           TTTTTTTGTACTTTT 100 34
        hmpA 1353465 .. 1353486 +  -8.8  -5.46657   AACACATACATGAAA           CTCTTCTC CTTTCA GAGAAGAG            TTTTTTATTGAGATA 100 40
HC659_RS07025 1354632 .. 1354652 +    -4  -6.04324   ATAACAATTAAGATG            GCTCTC TCTTGTAAT GAGAGC            TTTTTTCTTTTTTAA  93 30
HC659_RS07030 NONE
HC659_RS07035 1355889 .. 1355927 +  -6.7  -6.09196   ACGGAGGGAAAAAAG  CCCGGGAGAGTCAATCTC ATGT GAGAC-GACTGTCCGGGG   TTTTTTTGTTTTCGG 100 160
        ykkC NONE
        ykkD 1356635 .. 1356649 +  -2.9  -3.14647   ATTCTGTCATAAATT               GATTT TTATC AAATC               TTCAGTATAATGGAT  45 29
        purU 1357886 .. 1357919 + -13.3  -5.88565   GTGGTACCACGGAAA     CCCATTTCGTCCTTA TGAA TCAGGATGAAATGGG      TTTTTTTATTGTAGA 100 307
HC659_RS07055 NONE
        proA 1360334 .. 1360356 + -10.7  -5.24129   ATGTTCAATGAAAAA           GCTTATCTC ATTAC GAGATAAGC           TTTTTTATACGCGAA 100 48
HC659_RS07065 1360868 .. 1360896 +  -7.4  -5.52986   TGCTGAATAAATAAA        AAGAGGATGCCT GTACA AGGCATCCTCAA        TTTTTTTGATGAAGT 100 31
HC659_RS07075 1361897 .. 1361918 + -13.1  -5.21709   TAAAATAATGACCGG           CATCCTGAG GATT CTCAGGATG            TTTTTTGGTGTCGGA 100 33
HC659_RS07080 1362109 .. 1362133 +  -7.1  -4.52347   TTGGAGAAATAACAA          GGACCAGGC CGCGCAT GCCTGATCC          TTTTAATATTCTTTC  79 48
       rsbRB 1367504 .. 1367524 + -14.1  -5.31275   TCATCAATAAAAAAA            TCCGCTATC TGT GATAGCGGA            TTTTTTATGATGCGA 100 31
        ykoG NONE
        ykoH NONE
HC659_RS07135 NONE
HC659_RS07140 1374753 .. 1374770 + -14.1  -4.77036   GATGACTAATCAAAA             CCCCCGC TGCA GCGGGGG              TTTTTCATGATAAGA 100 32
HC659_RS07145 1374959 .. 1374986 + -11.4  -3.15231   ACGAGACACAAACAA        CAGAATAAGGGC TTAG GCCCTTGTTTTG         TTCCGTAATTGTGAT  84 18
        mgtE 1376836 .. 1376859 +  -8.1  -5.00196   TTATAAACGTAAAAA          GTCCGTCTC AACTGC GAGCCGGAC           TTTTATTATTTAACG  95 35
HC659_RS07160 NONE
        ykoL 1377806 .. 1377831 +  -9.2  -5.79588   AAATCATAAAAATTA         TCCTTATACA AGATAA TGTATAAGGA          TTTTTTTGCTTTTAG 100 10
HC659_RS07170 1378427 .. 1378448 +  -8.1  -6.23545   TCGTTAACTATTCTA           CACTCT-CTG TTT CAGGAGAGTG           TTTTTTTTGTTTCCA 100 34
HC659_RS07180 1380193 .. 1380217 +  -2.2  -5.28481   ACCTATCAAAAAAAA         GACTGATGC CTCGGTCA GCA-CAGTC          TTTTTTGATTAAATC  73 20
HC659_RS07190 NONE
HC659_RS07195 1383961 .. 1383983 + -12.1  -5.08601   AGTTAAACACGGAAA           GAGCTGACT TCATT AGTCAGCTC           TTTTTCTTCAACTGA 100 35
HC659_RS07215 1390044 .. 1390054 +  -6.8   -2.9175   ACGTTGACAAATCAT                 TGCG CTG CGCA                 TATCATTGACGTATA  58 34
HC659_RS07220 1391094 .. 1391115 + -13.1  -5.19879   GGGCGTAATCTGAAA           GACTCTGCT TAAA AGCAGAGTC            TTTTTGTGTTTGAAG 100 33
        sigI NONE
        rsgI 1393708 .. 1393730 +  -9.8  -3.03771   TCAGTTCTTCAAAAC           GGTGACGGAG ACG CTCTGTCTCC           TGTTCGGCGATCTCC  71 486
        htpX 1395367 .. 1395388 + -13.1  -5.86976   TACAAACACATTGTT           CCTCTGAGA GAAT TCTCAGAGG            TTTTTTATTTTATCC 100 41
        ktrD 1396881 .. 1396899 + -10.3  -5.26875   ATCGGATAGGCAAAA             CACCGCA TACTT TGCGGTG             TTTTTTGATTGCCAA 100 32
HC659_RS07255 NONE
HC659_RS07260 1397357 .. 1397402 + -16.5  -4.18762   AATAAAAAACACCAA TAAAAAAG-ACCTCTTAGGCGG CGT CCGCTTAAGAGGTGCTTTTCTA TTTTAAATAAGCATT 100 23
        kinE NONE
         ogt NONE
HC659_RS07280 1401594 .. 1401629 +  -6.1  -5.14965   AAAGAAACAAAAAAA    CCGCT-GACTCGGCTC CAAAT GAGCAAAGTCCGGCGG    TTTTTTAATGCACCT  83 19
        mtnE 1406456 .. 1406486 +  -7.7  -5.22312   GGACGAGAAACGAAA      CCTCTTTAGAC-GC GATT GCAGTTTGAAGAGG       TTTTTTGATATGGAT  93 182
        mtnW NONE
        mtnX NONE
HC659_RS07315 1409010 .. 1409023 +  -8.1  -3.05384   GAAATTGAAAACACT               CCAGC ATCA GCTGG                TTAAATAAAAGGAGG  67 4
        mtnD 1409593 .. 1409613 + -16.9  -5.28414   AATAAGCATGAGATA            GCCCCGTTC ATC GAACGGGGC            TTTTTATATTTATTG 100 36
       spo0E 1410430 .. 1410450 +  -6.1  -5.60993   ATGCATATATAAAGA            GAGAGCTTT TCG GAAGCGCTC            TTTTTTTCTGGAAAA  91 52
HC659_RS07335 1410924 .. 1410948 + -12.1  -2.79183   TCACGAAGATAAAAA          ACCCTCCTGAC ATG GTCAGGGGGGC          TATGATGCGGATACG  84 29
        mhqR 1413104 .. 1413130 +  -5.2  -5.38348   TAATAAGTAAAAAAA         GGAAGCCT GATATGTCACA AGGCTTCC         TTTTTTGCTATTTTT  84 31
HC659_RS07365 1418782 .. 1418803 +  -5.1  -5.69068   AAAAAACTAAGGACG           AGCTGTATC CTTG GATACGGCC            TTTTTTATGTTTTTC  88 208
        queC NONE
        queD NONE
        queE NONE
        queF 1421528 .. 1421546 +  -9.6  -5.49579   ACAGAAGCAGATTAA             GGCGTACA ATT TGTACGTC             TTTTCTTTTTTATCC 100 301
HC659_RS07395 1423174 .. 1423218 +  -8.1  -3.52506   CTTGAAGAAGTCGTA TAAAAAAGTCGTTTTCCTT AAAGGAC AGGGAATTCGACTTTTTTA TATTTGAATTTGATT  72 94
        ykvP NONE
HC659_RS07405 NONE
HC659_RS07410 1426545 .. 1426564 +  -2.8  -4.65895   ATCGACCATATAGTT            TCTCCTTA GAAA TGAGGGGG             TTTTTACATAAAAAA  62 510
HC659_RS07415 1427108 .. 1427123 + -10.4  -4.07568   TTTTTATGTAAAAAA              GCTGCC GGCC GGCAGC               TTTTGAGAAAGCGAA  89 48
HC659_RS07425 1427752 .. 1427773 +  -9.5  -4.96762   AGCCAAGAAGCTGAA           GGTTTCTCA TACG TGAGAAGCC            TTTTTATCATATATG 100 27
HC659_RS07430 1428676 .. 1428706 +    -9  -5.58454   GTTTTTGCCGTCTAA       GCATAGAAGAGACA ATT TGTCTCAGCTGTGC       TTTTTTTCATATAAA 100 26
        ykvU NONE
        stoA 1430678 .. 1430699 + -10.2  -5.21709   ATGGACGGAAGAATA           GCTGAGAG CATAGA CTCTCAGC            TTTTTTCATATAGAG 100 25
        pfeT 1432829 .. 1432855 +  -9.4  -5.03994   GACTCCTAAAATAAA         ACCAGCAGCC CTAATCA GGCTGCTGGC         TTTTTATGTATCAAG 100 27
        papB 1434344 .. 1434366 +  -2.6  -5.38951   AATAGAAATAAAAAA           GGACTTTGTT CTC GACATCGTCC           TTTTTTATCTGCATT  74 39
HC659_RS07460 1435558 .. 1435569 +  -4.4  -2.67667   TGGATTACCGTCTCA                TCGA AAGA TCGA                 CTGTTTAGTGAATGC  47 6
        glcT 1436570 .. 1436586 +  -4.4  -4.17048   ATTGAGGGAAAAAAA              CGGGAA GTTCA TTCTCG              TTCTTTTGCGCACCC  61 89
        ptsG 1438848 .. 1438873 + -14.1  -3.58365   AAGGGTGTTAGTACG         CCGTGCTTGTC AGAT GACAAGTACGG          TTGTATGATATAATA 100 39
HC659_RS07475 NONE
        ptsP 1440921 .. 1440944 + -13.2  -5.53991   AGTAATGTAAAAAAA          CCAGAC-GGCC TCC GGCCTGTCTGG          TTTTTTTCATAAGTA 100 36
        splA NONE
        splB 1442347 .. 1442372 +  -9.7  -5.24129   GAATATTTCACTTAA         ACGGGCTGTTG TGAT CAACAGCTCGC          TTTTTTATAAAAAGG 100 26
HC659_RS07500 1445154 .. 1445179 +    -7  -5.86976   TGTAATCCAATTACA         TCCCCAA-ACA TCATT TGTTTTGGGGA         TTTTTTATTTTATAA 100 36
HC659_RS07505 1446153 .. 1446177 +   -13  -6.25741   GGTGAAATAAAAAAA          GATTGCCTGT ACGAA ACAGGCAATC          TTTTTTTTATTATTT 100 31
HC659_RS07515 1449418 .. 1449445 +  -5.6  -4.87892   AAAAAATAAAAAACA        GGGTGCACAA CGAAAAGA TTGTGTGCCC         TTTCTTTTATTCAAA  75 32
        kinA 1451398 .. 1451417 +  -9.3  -4.02736   TCCAAAAAAATAAAA            CAACGGC TTAAAC GCCGTTG             TTTATCGTCTGCATT  85 28
HC659_RS07535 1454072 .. 1454099 +  -9.2  -5.45802   TTGAATAAATAAAAA        CAGCCGTTGCC AGAAAGA GGC-ACGGCTG        TTTTTATTTTAAAAG 100 33
HC659_RS07560 NONE
HC659_RS07565 1459672 .. 1459685 +  -5.9  -6.48081   GACGGACTGATTTAA               CGGCT GAAA GGCCG                TTTTTTTTTTATGAA 100 26
HC659_RS07570 1460573 .. 1460592 +  -3.5  -3.54741   AAGATTCCTGAAATA            GGGGGAA ACAAGC TTCCACC             TTTGCAAAAGTAATC  50 39
HC659_RS07575 1461273 .. 1461286 +  -3.1  -3.57615   GCGGTAGAGCTGAAA               GTAAG TTGT CTTGC                TTTCAGAGGTATTCA  50 110
        abbA 1461537 .. 1461556 +  -6.5   -5.4505   GGACACCCTATAATT            GATACTC CACAAA GAGTATC             TTTTTTATTGAAAGG  93 43
HC659_RS07585 1462098 .. 1462113 +  -5.4  -5.24796   CGCTCGTTGAATAAG              TAGGCT GTAC GGCCTA               TTTTTATTATATAGC  81 23
        ccpC 1463130 .. 1463146 +  -8.7  -6.04953   AAAATCCATTTTAAA              GACAGCG AGG TGCTGTC              TTTTTTTATTTATCT 100 27
HC659_RS07595 NONE
HC659_RS07600 NONE
HC659_RS07605 1465080 .. 1465102 +  -5.5  -5.94214   TCTGATCACTCACTG           GGAACTGCT AAAAC GGCTGTTCC           TTTTTTTCTTGTCTT  91 36
        dapD 1465904 .. 1465926 + -16.4   -3.7732   AAGTTTGATAAAAAA           GGCGTGGATA ATA TATCCACGCC           TTATTCGTATAGGCA 100 45
HC659_RS07615 NONE
HC659_RS07620 1467391 .. 1467415 +  -8.6  -5.16038   AATTCAGTAATATAA          AAACCGAAGC AAAAA GCTTCGGTTC          TTTTATTTATTCTGT 100 31
HC659_RS07630 1469026 .. 1469047 +  -4.4  -3.41366   CCAAGAACGAAAAGC           GGTCTAGC ATATTC GTTAGGCC            TCTCTTTTAAAATAG  53 47
        ykuV 1469552 .. 1469566 +  -8.6  -5.72622   AGTATTTCCTAAAAA               CCTGAT CAC ATCAGG               TTTTTTATTTGTGCA 100 55
         rok 1470577 .. 1470598 +  -9.5  -5.80364   AAATATAAAGAAAAA           CTGCTTG-GC ATC GCTCAAGCAG           TTTTTTTATTGAGGT 100 39
HC659_RS07650 NONE
HC659_RS07655 NONE
HC659_RS07660 NONE
        mobB NONE
HC659_RS07670 NONE
        moaD 1475865 .. 1475898 + -21.2  -3.34468   CGGTCAGCGGGGGAT     GAAAACCGGACGGC ATTTCA GCCGTCCGGTTTTC      TGTATTTCATTGGCA 100 24
HC659_RS07680 NONE
HC659_RS07685 1479682 .. 1479697 +  -7.6   -4.6526   GAATAATATGAAAAG              CCTTCA ATAT TGAAGG               TTTTTGGAAATTTAT  84 35
        yknW NONE
HC659_RS07695 NONE
        yknY NONE
        skiZ 1483499 .. 1483519 + -14.1  -5.88197   CTGCGTTATGAATAG            CCTCATGCA ACA TGCATGAGG            TTTTTTTATGTTTAG 100 26
HC659_RS07710 NONE
        pfkB NONE
HC659_RS07720 1487369 .. 1487392 + -11.8  -5.18726   AAAATAAGAAAAAAA          GCGTCCTTTT GTTC GAAAGGACGC           TTTTTCTTATCCGGC 100 34
        lepB 1488091 .. 1488117 +  -8.7  -5.45802   CAAACAAAATAAAAA        CGCCTTGCTGGC CTAG GACAGCA-GGCG         TTTTTATTTTGAAAA 100 29
HC659_RS07735 1490199 .. 1490214 +    -9  -5.53991   ACGCCGAATAAAAAA              GCAGAG ATTT CTCTGC               TTTTTTTGATACCTA 100 30
HC659_RS07740 1491168 .. 1491185 +  -8.4  -4.99947   AGAAAAATAAAAAAA             GGAGGC GGAAAA GCCTCC              TTTTATTTACTTAAA  95 31
        abhA 1494358 .. 1494380 +  -9.9  -5.08824   AATTATGCTAAAAAA          GGCGGAG-TG ATAT CATCTCCGCC           TTTTTTGCGTGCCAA 100 41
        kinC NONE
HC659_RS07770 1496690 .. 1496701 +    -3  -2.85351   GAATATGATAAAATT                TGAT CAAT ATCA                 TGTCATATAAAGGAG  42 54
        ktrC 1497402 .. 1497418 + -10.1  -4.90906   TAGCAGTCAAATAAG              CCGTCCT CAA AGGGCGG              TTTTTCGTATTATCA 100 38
         ade 1499282 .. 1499306 + -20.1  -5.42259   TCACTGCAATAAAAA          GAGGCACTCCC TTA GGGAGTGCCTC          TTTTTTTAAACCTCC 100 29
HC659_RS07795 1502358 .. 1502380 + -13.4   -5.0916   TTTTAAAATAAAGAA           ACGGCTGGCA TTG TGCCAGCCGC           TTTTTCTATTAGCGC 100 30
HC659_RS07810 1504090 .. 1504108 +  -8.9  -5.47218   CTATCGTGTGAAAAA             GAGCTGA CTCGA TCAGCTC             TTTTTTTGAATGAAA 100 19
        pdhA NONE
        pdhB 1506634 .. 1506657 +  -8.2  -3.41569   AAACTGCATAATCGA          GAGGGAAGAT GAAC GTTTTCCCTC           TATTATATATCTGTT  70 43
        pdhC NONE
        lpdA 1509492 .. 1509515 + -13.2  -6.09196   TTTTCATATCAAAAA          CAGCCC-CGCT TTG AGCGAGGGCTG          TTTTTTTATTTTGAC 100 41
HC659_RS07840 1510440 .. 1510462 + -17.8  -5.84011   GAAGAGTAAAAAAAA           GCATGCGGCT TAA AGCCGCATGC           TTTTTATTTTTTATT 100 32
HC659_RS07850 1512393 .. 1512434 + -15.3  -3.85785   CGCGAAGATTAAGAT GTAAGAAAAAGAGCCGGGG GATA TCCCGGCTCTTTTTTATGC  TTGTGTTACTTTTTG 100 22
HC659_RS07860 1513513 .. 1513532 +  -5.7  -4.65895   AAGCGATAGTGAAAA            CGAACCG CATGAA TGGTTCG             TTTTTACGTGAGAAG  73 43
HC659_RS07865 1514417 .. 1514447 +  -2.5  -2.65538   ATTTGAAGAGTATCT       TCATGCTCGGAAG TAGGC CATTTGAGCAGGA       TGATCTCAGCTTGTT  41 10
HC659_RS07870 1514926 .. 1514946 + -14.1  -3.49924   CGGGTTCAATAAAAA            GCCTCTCAA ACA TTGAGAGGC            TTCTGATGATTTGAA 100 65
HC659_RS07885 NONE
HC659_RS07890 NONE
        sigQ 1521095 .. 1521119 + -12.2  -5.15969   GCTGATATAAAAAAA         GCGCTTGTCCG ATTC CGG-CAAGCGC          TTTTTTACATTAAGC 100 31
        typA NONE
HC659_RS07920 1524521 .. 1524555 + -17.4  -3.39727   GACAGTCTGCAAAAT     CATAAAAGACTCAGCT GAA AGCTGAGTCTTTTTTG     TGTTCTGTATGGTTA 100 21
HC659_RS07935 1526962 .. 1526974 +  -7.7   -2.8978   AGATCAGGTCTCGCC                CAGCT TGC AGCTG                ATTTGCTGTAACACT  64 2
        glsA NONE
HC659_RS07950 1528895 .. 1528917 +  -4.2  -5.60993   AAATAAATGATAAAA           CTCAAACT TATTAAC AGTTTGGG           TTTTTTTATAACCGC  86 35
        ftsW 1530319 .. 1530335 +  -2.2  -2.84173   AAACAAGTGTGTACA              GGGGAA GGATA TTCCGC              TATGATAGATTATAT  41 42
         pyc 1533829 .. 1533860 + -11.8  -5.71712   AAAAGCATAATAAAC      AAAGAGTGTATATC ATTT GATATACACTCTTG       TTTTTTTATATAGAA 100 31
HC659_RS07970 1536533 .. 1536548 +  -3.3  -2.90496   ACATAGATGGCATTT              TGAGT AAAAAA ACTCA               TAATTTAAGAGAAGA  44 140
        coxB NONE
        ctaD NONE
HC659_RS07985 NONE
        ctaF NONE
        ctaG 1541510 .. 1541532 +  -9.9  -4.47271   GACGATATCATAAAA           GGTACAGCG AAATA TGCTGTACC           TTTTCGTTACATTTG  91 28
HC659_RS08005 1542552 .. 1542566 +  -3.5  -2.53015   ACAAGAGATTGTGAA               TCGCC ACGGG GGTGA               TAGATTGAAAAATAT  43 90
HC659_RS08010 1543618 .. 1543637 +  -5.7  -5.56264   CGATGGTAATGAAAG            CCGCGGAC GAATG GTCC-CGG            TTTTTTCTATTTCCA  88 32
HC659_RS08015 NONE
HC659_RS08020 1544497 .. 1544513 +  -2.9  -5.14563   GACAAAAGATTAAAA              GGCCC CGAAAAA GGGTC              TTTTTTCATGCGGAC  70 28
        ricF 1545058 .. 1545078 + -11.2   -4.2349   GATGTAAAGTGTCCT            GACGAGAC TGGCC GTCTCGTC            TTTTACATATAAGAG  90 24
HC659_RS08030 1545399 .. 1545418 +   -15  -2.96822   TAGCTATAAAAAAAT            CCCCGCAG GCAT CTGCGGGG             TCCTTCTATTCCTTA 100 38
        rsmD NONE
        coaD 1546748 .. 1546769 +  -5.9  -5.83226   CAAAAATTCAGACAA           GGATGAG GGTTTTGA CTCATCC            TTTTTTTGTTCCGTT  93 20
HC659_RS08050 1548939 .. 1548950 +  -2.2  -2.97667   AAAGAAATAGAGAAT                TGGG AGGG CTCA                 TAATTTGCTACGTAA  42 11
HC659_RS08055 1549973 .. 1549991 + -13.2  -5.01546   AGCTGAAAGCGAAAA             GCACCTGA TTC TCAGGTGC             TTTTTCTATACATTT 100 18
HC659_RS08070 NONE
        rpmF 1552175 .. 1552209 + -14.5  -5.13344   TAAAAAGTAACTAAT    GAGAAAAGCGCAGGGT GAAA GCCCTGCGCTTTT-TC     TTTTTCTCTTCCTGT 100 27
        gerR 1552919 .. 1552944 +  -5.5  -4.40882   AACGCCTGAAATGAA         CCGGCCCTAT AGTAAGA ATA-GGCCGG         TTGTTTTGATTTCTA  70 44
HC659_RS08090 NONE
        bshC 1556203 .. 1556219 +    -8  -6.24157   TAAAGTTTTAAAGAA              CCCTGA CTAGT TCAGGG              TTTTTTTTTATGGGT 100 43
        mraZ NONE
        rsmH NONE
        ftsL NONE
HC659_RS08115 1560291 .. 1560315 +  -4.9  -5.66684   AATCCTGATTAAAAA          GAAAGCCGTCG TTA TGCAGGCTTTC          TTTTTTTATGCCTTC  88 29
HC659_RS08120 1562332 .. 1562355 +  -8.9   -3.8165   AGAAGATGAAAAGGA          GGCAG-CCGA TTGAT TCGGGCTGCC          TATTCTTTTATTGCA  78 13
HC659_RS08125 NONE
HC659_RS08130 NONE
HC659_RS08135 NONE
       spoVE 1567660 .. 1567691 + -13.2   -3.7511   TGGAAACAATTGATG      CGATAACCCTGT CCAACAAA ACAGGGTTATCG       TTATGTTATAGAGAA 100 78
        murG NONE
        murB 1569811 .. 1569836 +   -12  -4.13767   ACTGTAAGCAAACGA         CAAACGGCAT CATAGT ATGCCGTTTG          TTTTGGAATAGACAG  93 74
       divIB NONE
HC659_RS08160 NONE
HC659_RS08165 NONE
HC659_RS08170 NONE
        ftsA NONE
        ftsZ 1575175 .. 1575200 + -14.9  -5.98675   CGCGGCTAATGTAAA         GGACAAAATCG TTTT CGATTTTGTCC          TTTTTTGTTTTTCTC 100 32
HC659_RS08185 1579783 .. 1579800 +  -9.1  -5.40625   ATTAAGTGGAAAAAA             GCTGCCG TCAT TGGCAGC              TTTTTTATATCCTCT 100 36
     spoIIGA NONE
        sigE 1581708 .. 1581720 +  -5.5   -2.7641   AACCCCTTGATTTTA                CAGGG ATT TCCTG                ATTTCGACAGTTTTT  52 57
        sigG 1582600 .. 1582637 + -18.1  -3.24329   ATATTCATCAATAAT   GAAAAGCCTTTAAAACG ATGT TGTTTTAAAGGCTTTTC    TATTGATTACGGATG 100 27
HC659_RS08205 1583650 .. 1583668 +  -8.8  -5.05606   GGAAGCGGTGAAAAG             CGGAGTAC ATC GGACTCCG             TTTGTTTTTATTAAG 100 135
HC659_RS08210 NONE
HC659_RS08215 1585466 .. 1585479 +  -2.3  -5.18561   GATGTGGTAAAATAA               GTGGG AAAT TCCGC                TTTTTTAAATGTTTG  69 141
        pgeF NONE
HC659_RS08225 NONE
HC659_RS08230 1587495 .. 1587520 +    -2  -2.83103   GACGAACATCAGAGG         TGGTAAAGCGA GATGA TC-CTTTATCA         AGTTTTTTCGGTTTT  41 20
HC659_RS08235 1587795 .. 1587818 + -14.6  -3.64703   TGTGACAGTTTGATA          GGGGCTTGGC AGCA GCCAAGCCTC           TTTACATAGAAGGGA 100 41
HC659_RS08240 1588602 .. 1588616 +  -4.2  -3.55072   AGAGTTACGTTTGAA               CGACAA AAA TAGTCG               GTTTTTCAGTTTTTT  55 14
      divIVA 1589474 .. 1589503 + -12.9  -6.14618   GGTACCGCGAGATAA       GCTTTCTCGTCCC TTAT GGGATGAGAGGGC        TTTTTTTATTTTCTG 100 298
        ileS 1592318 .. 1592337 + -12.1  -5.60993   AAATAATGCAAAAGA            GCCCGGC GTAAAA GCCGGGC             TTTTTTTGTGCCAAG 100 35
        ylyA 1592808 .. 1592838 +  -9.8  -2.82023   CGGATATCGAATATG       GTCAGGCACTGT ATGAATA ACAGTGTCTGGC       TGGTTAATATGCCTG  75 6
        lspA NONE
HC659_RS08265 1594430 .. 1594454 +  -8.6  -5.62045   CACCTTGTCCTAAAA         CCCCTCTATGC TCTG GCA-GGAGGGG          TTTTTTCTTCTATAT 100 148
        pyrR 1595122 .. 1595147 + -10.5    -5.626   GCAGGTCTTTGTATG         CCTCTTTGCGT AAAA AAGCAAAGAGG          TTTTTTTATACAGTC 100 112
HC659_RS08275 1596598 .. 1596621 + -11.8  -5.43866   CTCTATTTAACCATA          CCCCGAGTCTA TCT TAGAC-CGGGG          TTTTTTTCAGCCTTA 100 107
HC659_RS08280 NONE
HC659_RS08285 NONE
        carA NONE
        carB NONE
        pyrK NONE
HC659_RS08305 NONE
        pyrF NONE
HC659_RS08315 1606209 .. 1606224 +  -6.8  -5.84381   TGCTGTACTTGAAAA              CAGGCT GTGA GGCCTG               TTTTTTTATTAATCC  93 79
HC659_RS08320 NONE
        cysP NONE
         sat NONE
        cysC NONE
        cobA NONE
HC659_RS08345 NONE
HC659_RS08350 1612277 .. 1612300 + -15.4  -4.99043   AGAAGAAAGAAATAA          GCCAGAGCAT ACAA ATGCTCTGGC           TTTTCTTTATGCGGC 100 26
HC659_RS08360 1616844 .. 1616866 +  -8.5  -4.77165   ATGATATAATCTTAG           GGGTAATAG CGTGT CTATTGCCC           TTTTATTATGAGAAC  95 47
HC659_RS08365 1617823 .. 1617834 +    -3  -4.07568   CTTACTAGGCTAAAC                TAGA GACG TCTA                 TTTTACAGGGGGAAC  55 68
        remA NONE
         gmk 1618741 .. 1618752 +    -3  -3.09878   AGAAAATGCTGGAGG                TTGA ATAA TCAA                 TGTTAGATCCGTCAA  43 18
HC659_RS08380 1618965 .. 1618991 +  -9.6  -5.47218   GAATAGTAGCACAAG         TAGCAACCTATA TCA TGTAGGTTGTTA         TTTTTTTCCGTGCGG 100 35
       coaBC NONE
        priA NONE
HC659_RS08395 NONE
HC659_RS08400 NONE
        rsmB NONE
        rlmN NONE
        prpC NONE
        prkC 1629287 .. 1629302 +  -3.2  -2.77013   AACAAGGAGGGAAAA              TATGCC TGAG GGCAAA               ATTATTAAGGCGCTA  44 39
        rsgA NONE
HC659_RS08430 1630857 .. 1630883 +  -3.1  -4.84527   AGCAGCTTTAGAAAA        GAGC-TGGGCATA CAA TA-GCCTAAGCTC        TTTTTCCTGTATGCA  67 40
HC659_RS08435 NONE
HC659_RS08440 1631750 .. 1631774 + -12.8  -3.85542   TTCACCACATAAAAA          CGCCTGCCAC ATATC GGGGCAGGCG          TTCATTTTGTTATAC  95 64
HC659_RS08450 NONE
HC659_RS08455 1634283 .. 1634311 + -19.1  -3.68394   TATATAGTTTCTGCA        GAATAGAAGGGCA ATT TGCCCTTCTATTC        TTATGTCTGCTTTTA 100 20
       sdaAB NONE
       sdaAA NONE
        recG NONE
        fapR NONE
        plsX NONE
        fabD NONE
        fabG NONE
        acpP 1641785 .. 1641796 +  -7.2  -4.25458   TCCCGCCGAAACGCG                GGGC TTTA GCCC                 TTTATTCGTGCAGTT  75 55
        rncS 1642647 .. 1642668 +  -8.7  -3.75535   TACGAAACAATAAAA           TCCCCCTTA TGAC TCAGGGGGA            TTTCAGTATGTATGC  78 28
         smc NONE
        ftsY 1647306 .. 1647355 + -14.5  -3.83844   TTAGTGGAAAAAGCC GACGATTAAGAAAAAGGCCCCAA CATC TTGGGGCCTTTTTCTTTTTTATC TTCTTACTTGATAGG 100 17
HC659_RS08520 NONE
         ffh 1649701 .. 1649721 +    -4  -3.61398   TACCTTTTATGTAAT            CGGTTATA CATGA TAAAACCG            TTGTTAAGAAAAAAC  52 27
        rpsP NONE
HC659_RS08535 1650326 .. 1650346 +  -3.9  -5.40072   ATATTTGACTAAAAG            GGAGAGG GCCGGCA CCTCCCC            TTTTTTTACACGCAA  78 29
HC659_RS08540 1650818 .. 1650830 +  -5.5  -2.62184   AAAAGTAATTGAAAT                TCGCC AGA GGTGA                TCATATGACAAAGCG  51 13
        rimM NONE
        trmD 1652174 .. 1652184 +  -2.4  -3.49419   CTTGAAAACGATGTT                 CCGC TGT GCCG                 GTTTTTGTGGCCAAG  47 112
        rplS 1652591 .. 1652614 + -12.6  -5.60993   GATAACGAACGAAAA          GAGCTTGTTA CCTG TAACAAGCTC           TTTTTTTATACAGAA 100 42
        ylqF 1653563 .. 1653590 +  -9.2   -5.4833   GAACAGCCGACGATG        TAAAGGCGCGCA GAAA TGCGGGTCTTTA         TTTTTTCTTGGCTGA 100 23
        rnhB NONE
HC659_RS08570 NONE
HC659_RS08575 NONE
        sucC NONE
        sucD 1658712 .. 1658734 + -11.3  -3.31915   CGCATTAATAAAAAA           GGGACAGCC GTCAA GGCTGTTCC           TGCTTTTTCTAACAA  82 33
        dprA 1659661 .. 1659679 +  -6.8  -3.57908   GGAACCCTTTTGAAT             TATCGTTT GAC AAACGGTA             TTGTAATATTTAATA  64 28
        topA 1661923 .. 1661944 + -10.9  -4.21954   AACCACAGAAGTAGC           GGTGAGCAG GGTC TTGCTCACC            TTCTTTGTGTGTTAA  90 27
       trmFO 1663351 .. 1663363 +  -5.5  -3.04144   TACCATTTAAAAGCC                CTTCC TGG GGAGG                TATTAGGCATGGAGA  53 72
        xerC 1664284 .. 1664299 +  -6.2  -3.02856   GCATTTAAGAAAAAT              TAAAGG AGGC CCTTTA               TGTCATCTTTTCATG  56 23
        clpQ NONE
        hslU NONE
        codY 1667093 .. 1667111 +  -9.6  -5.95539   CATTAATCACAAAAA             GAACCCTT TTT GAGGGTTC             TTTTTTTATTTCAAA 100 35
        flgB NONE
        flgC NONE
        fliE NONE
        fliF NONE
        fliG 1671310 .. 1671336 +  -2.4  -2.83519   GCGGAGGGGATGATA         TTATTGTCTAAT ATC ATTAAACAAGAA         TCATCTATTTCTCCA  41 15
        fliH NONE
        fliI NONE
        fliJ 1673819 .. 1673833 +  -2.8  -2.62184   TTTATGATTCAAGGC               CATTAG GAG CGAATG               TAATGTCCGGCAAAA  41 20
HC659_RS08665 NONE
HC659_RS08670 NONE
        flgD NONE
        flgG 1677167 .. 1677194 +  -9.8   -3.8823   TAAACGTTAAGGAGG        GAGGGGAGGCGA GTAA TCGCTTCTCCGC         TGTTTTATGATTAAA  85 31
        swrD NONE
        fliL NONE
        fliM NONE
        fliY 1680014 .. 1680026 +  -2.7  -2.56864   AAGGAGAGAGATAGA                TTATG GCA CATAG                AATTTTAATTGTAGA  41 49
        cheY NONE
        fliZ NONE
        fliP 1681691 .. 1681703 +  -4.1  -3.08522   ATTTAATTGTGAAAT                CTTTG CTT CAGAG                CTTTTAGGGTAGGTG  47 6
        fliQ NONE
        fliR NONE
        flhB 1683860 .. 1683872 +  -2.7  -3.53012   AAAACAAAAAGTATA                TTGAA TTT TTCGA                TTTAAAAGGAGAGAA  48 22
        flhA NONE
        flhF NONE
HC659_RS08745 NONE
HC659_RS08750 1688989 .. 1689010 +  -4.5  -2.67058   AAAAAAGAGAGGGTG           TGATTCAAA TGGA TATGAATCA            GTATTTAGATGTCTT  47 23
HC659_RS08755 NONE
HC659_RS08760 NONE
HC659_RS08765 1692135 .. 1692168 +  -3.9  -3.48378   GAAAAGCTCTTTGTC     GCCTTAGGTGCA-TCA TTA TGAGTACAACTGAGGC     TGTTGTTATAAAGGT  52 5
HC659_RS08770 NONE
        sigD NONE
        swrB 1694044 .. 1694056 +  -4.8  -3.48593   TTTATGCAGAGGGTG                CTGC AGGCG GCAG                TTCTGTACAAAAATG  57 98
        rpsB 1694867 .. 1694895 + -12.6  -5.00616   GTAACCTATTCAAAA        GGTGATAAGAGG GACTG CCTTTTATCACC        TTTTTTCAAGAAAAA 100 37
HC659_RS08790 1695883 .. 1695907 + -13.7  -4.61633   TCTTTTCAGGCAGTA          TAGGGGACACA TTT TGTGTTCCCTA          TTTTTAAAACTATAT 100 70
HC659_RS08795 NONE
         frr 1697293 .. 1697329 +  -2.4  -3.29038   TACAATAGATAATAG    TGAAAAGACCCTCT CATGTTTAC AGGGGGTTTTTTTG    TTAATACTGTTGATT  43 53
HC659_RS08805 NONE
HC659_RS08810 1698980 .. 1698996 +  -6.7  -2.87026   TACTTTCTGCTTGCC              CTTTTTT CAT AAAAAAG              TCTAATATGAATATG  58 14
         dxr NONE
        rseP NONE
        proS 1703255 .. 1703277 + -12.1  -3.26188   ATAGAAATAATAGAA           GGTACCTCA TTGCC TGAGGTACC           TTCACTTATGATGTT  87 74
HC659_RS08830 1707637 .. 1707659 + -13.6    -3.524   GTTCTAATATGGAAA           GCAGAATTTC TCA GAAATTCTGC           TTCTATGCATACATA 100 34
        rimP NONE
        nusA NONE
        rulR NONE
HC659_RS08850 NONE
        infB NONE
HC659_RS08860 NONE
        rbfA 1712994 .. 1713020 + -10.9  -4.42976   CTGAATAAAAAAAGA         GAGGATAGGCG TATAT CGTCTGTCCTC         TTTCTTCGTTTATAA  95 33
        truB NONE
        ribF 1714945 .. 1714963 +    -6  -2.52464   GGAAGCCATCCGTTA             TTTCAGCA ATT TGCGGAAA             TAACTTGCAACGCAC  54 4
        rpsO 1715402 .. 1715417 + -10.4  -5.36965   CGATAATCGTAAAAA              GCGGGA GGAT TCCCGC               TTTTTTATCGTATTA 100 35
         pnp 1717697 .. 1717718 +  -8.7  -4.66535   AATGAAAACATAAAA           GGAGCCTGGG AGA CCC-GGCTTC           TTTATTTTGAAGCTT  90 40
HC659_RS08890 1718767 .. 1718777 +  -3.2  -3.64703   GAAGTAACAGATGAA                 GGCA GCT TGTC                 TTTGAATAGGAGGAA  52 34
HC659_RS08895 1720035 .. 1720059 + -14.3  -5.19261   CGTCTTAAAAAGGAA          AGCCTGCTCCA TAA TGGAGCAGGCA          TTTTTTAATCCCTTT 100 33
HC659_RS08900 1720409 .. 1720429 + -11.2  -5.71712   AGAAAACATCTGAAA            CATCGGCT GCCGG AGCCGATG            TTTTTTTATATGGAA 100 72
        dpaA NONE
        dpaB NONE
         asd 1723239 .. 1723272 +  -8.3  -3.08996   TTCTAAAGACGAATA     GAAGAGAGTAAGGC GCTATCA GCC-TGCTCTCTTC     TGTTACGTCCGAATA  67 52
        dapG NONE
        dapA 1725448 .. 1725479 +  -4.4  -4.71418   ACAGTGAAACAAACG      CGGTCATTCTCA CATTCAGC TGAGTTTGACCG       TTTCTTTTACATATT  68 52
HC659_RS08930 1727275 .. 1727301 + -18.2  -5.37345   AGTATAATGACTGAC         TAAAGACCGGAG CTG CTCCGGTCTTTA         TTTTTTGTCCTTCAA 100 34
        tepA NONE
        tepJ 1728389 .. 1728407 +  -7.4  -4.38203   TCCTACAGAAAAAAC             GCAGCC TGTAAAC GGCTGC             TTTCTTCATTATGTA  79 86
     spoIIIE 1730805 .. 1730837 +  -4.8  -4.10164   TCAAAAGAGAAATAT      GATGAGCTCTCTTC TTAAT GAAGGGAGTTCCGC      TTTCTGTAGTCGTCA  63 8
HC659_RS08950 1731695 .. 1731714 +  -3.5  -5.95539   AAACGATTCTAAAAA            CGGACGC CTGTAT GTGTCTG             TTTTTTTATTTGCCC  88 29
        bcbE 1733029 .. 1733047 +  -5.3  -5.49809   AGAAAAAAACTTAGG            GACGGTCT AGCC AG-CCGTC             TTTTTTTGCGCTTTC  88 16
HC659_RS08960 NONE
HC659_RS08965 1735788 .. 1735809 +    -8  -4.82901   AAATCATAAACAAAA           CATCCCTC CAGTGT GAGGGGTG            TTTTTCTGCGGAAAG  88 32
        efpI 1736566 .. 1736579 +  -6.7  -3.13164   GCTGGCACTGCTGAT               CCGAA AATA TTCGG                TGTATAGTTTCTTTT  61 27
HC659_RS08975 1736908 .. 1736925 +  -7.7  -5.63645   CACTCACTAGGAAGA             GAGGGGA TTTT TCCTCTC              TTTTTTATGTTTTCC 100 31
HC659_RS08980 1737806 .. 1737816 +    -4  -4.66833   GATCAATCCGGGTTT                 TCAA GCT TTGA                 TTTTTAAAATTGGAA  66 8
        rodZ 1738747 .. 1738768 +  -5.9  -4.65916   TAAAAAGGAAGAAAA           GTCATCTTA ATTA TCAGATGAC            TTTTCTTCACGTCCG  76 16
        pgsA NONE
HC659_RS08995 1740742 .. 1740755 +  -3.1  -3.86307   CGCCAAGAAAAAATC               CGAAT ATGC GTTCG                CTTTTTTCTTGGCAA  55 112
        recA 1741905 .. 1741923 +  -8.9  -5.63645   CAAATGATACAAAAG             GCTGAGT GAAAA ACTCAGC             TTTTTTGTATTTTGC 100 56
HC659_RS09005 1743316 .. 1743332 +  -4.5  -2.80715   GTATTTCCGACACAT              TTACAAT GAA GTTGTAA              CATTTGTTTTTTTAA  48 124
         rny 1745053 .. 1745079 + -12.5  -5.40072   GTAGAGTATGCAAAA         TAAAGTGATGC GCTAA GCATCACTTTA         TTTTTTTGACGGCAA 100 23
        ymdB 1746064 .. 1746085 +  -5.9  -2.66711   AGCAACATCTAATAA           TGATTGTTC TAAT GAACACTCA            CTTATCCATTGTAAA  54 171
       spoVS 1746397 .. 1746425 + -16.9  -5.10877   CAAATAAAGCATTCT        CAACCTGTTTGCG TAA TGCAAACAGGTTG        TTTTTCATTTATTGT 100 44
         tdh NONE
HC659_RS09030 1748882 .. 1748903 + -13.1  -4.52101   CAGCTATTGTAACAA           GAGGAAGAG TTTA CTCTTCCTC            TTTTGATTCCTTATT 100 29
        miaB NONE
        ricA 1750990 .. 1751012 +  -9.9  -5.75599   GCTGTTCTCTCTAAA          CACGGTGCCT TTAC AGGC-CCGTG           TTTTTTTATCATTTG 100 27
        cotE 1751800 .. 1751830 +  -6.1  -5.49569   CTGAAGAATAAAAAA       GGGACTAGGGG AGACAGTAC CCCCAAGTCTC       TTTTTTATATTGATA  91 30
        mutS NONE
        mutL 1756416 .. 1756446 +   -20  -5.67967   TAGCGGGGGTGGTAA       GCATTGATCCATTC TCT GAATGGATCAATGC       TTTTTTTGTACTCCT 100 38
HC659_RS09070 1758697 .. 1758731 + -10.9  -5.79595   GCACTAGTGCGAAAA    GCGATTCTTGTTGGGC ATGC GTCCAA-AAGAGTCGC     TTTTTTATTTTCAAA 100 42
HC659_RS09075 NONE
HC659_RS09080 NONE
        fabD 1760793 .. 1760806 +  -2.3  -3.02947   CCCCGCTAAAGCATT               TGCCC CTAT GGCCA                TGTATCTCATCAATC  42 32
HC659_RS09090 NONE
        fabD NONE
HC659_RS09100 NONE
        pksF NONE
HC659_RS09110 NONE
HC659_RS09115 NONE
HC659_RS09120 NONE
        pksJ NONE
        pksL 1797673 .. 1797684 +    -3  -3.59979   GGCTTCTAAAGATAT                GTTT TGGA AAAC                 TTTCAAATAAGAGAG  48 4
        pksM NONE
HC659_RS09140 NONE
HC659_RS09145 1834690 .. 1834713 + -12.4  -4.32951   CTGAGAAAACACAAA          CGCCCCCTCT TTTA AAAGGGGGCG           TTTTGAATGTTATTT  93 37
HC659_RS09170 1839348 .. 1839358 +  -4.6  -3.14564   GTCCGTCTCAGCAAC                 CGGG CAG CCTG                 TTACTAAAACCCTCC  51 46
HC659_RS09175 NONE
HC659_RS09180 1840843 .. 1840867 + -11.5  -5.47159   GGAGAATAAAGAAAA          CAGACGGTC ACTCACA GACCGTCTG          TTTTTTATCTTCAGC 100 32
HC659_RS09200 1842486 .. 1842503 +  -2.7  -3.11768   AAAAAAAGGGCAAAA             TGGATAG GTGG TTGTCCA              TGTTGAATGCTATAA  45 59
        miaA NONE
         hfq 1843789 .. 1843814 + -13.9  -4.62783   TCAAGACATGAGGAA         AGGCTGCCGGG GGTT CCCGGCGGCCA          TTTTTAACATGAATC 100 57
HC659_RS09215 NONE
HC659_RS09220 1844588 .. 1844619 + -12.4  -4.13963   AAAAAACGACACCCC      GAGTAGGACGAGAG ATGA TTCTCGTTCTGCTC       TCTTTTTTGGGCCCT  93 75
        nrdI NONE
        nrdE NONE
        nrdF 1848232 .. 1848252 + -12.7  -4.19238   TTTGAAGATGAAAAA            GAGCAGATA TAA TATCTGCTC            TTTTCGGCTTGAAGG  95 14
HC659_RS09240 1848919 .. 1848945 +   -13  -5.60993   TCTTGAATAAAAAAA         CCCGGTTTCTCG CGA TGAGGAGCCGGG         TTTTTTTATGAGACG 100 31
       spoVK 1851334 .. 1851360 + -12.4   -5.2112   GCATCTGGATCTGCA         TAGACCTCTCAG TTT TTGAGAGGTCTG         TTTTTTGCTCGTATT 100 23
        hflX NONE
HC659_RS09260 1854016 .. 1854026 +  -2.6  -4.11295   AGCAATTAATTTAAA                 TTTT TTA AAAA                 TTTCTCTGGATTTGA  55 27
        glnR 1854539 .. 1854551 +  -3.4  -2.98356   TTCATTAATCCGTTA                GCAA CTGTT TTGC                TATATACATTTACCT  45 33
        glnA 1855933 .. 1855959 + -13.8  -5.49569   GTATTAATATCTCAA         TCCCTTGGCACT AAA AGTGTCAGGGGA         TTTTTTATGTTAATA 100 34
HC659_RS09275 1856709 .. 1856739 +  -3.4  -2.78679   TGAAACATTTGCTGA      GG-CATTTCGTGA AGCTGA TCACCAAATGACC       ATTTCCATAGAGGCA  44 192
HC659_RS09280 1857183 .. 1857193 +    -4  -4.82855   ATAGTCATATTTCCC                 GTAA GTA TTAC                 TTTTTGGATTTAATA  69 76
HC659_RS09285 1857642 .. 1857661 +  -2.2  -2.83112   TGACACTAGATGGTA            TTAAGAAA GCAG TTTCTAAA             TATGGTACATTCCCT  41 153
HC659_RS09290 NONE
HC659_RS09295 1859013 .. 1859047 + -18.9  -4.08689   CAATCTTGTTGGTAA     CAAACATCCTCTTAC TTATT GTAAGAGGATGTTTG     TTTAATTCTTACATA 100 42
HC659_RS09300 NONE
HC659_RS09310 NONE
HC659_RS09315 1861524 .. 1861534 +    -4  -3.02144   GAACGGAGACTTGCT                 TTCA ATA TGAA                 TGTTAAAAAAGCTGC  47 63
HC659_RS09320 1861813 .. 1861827 +  -2.1  -2.63041   GAGTTTAAAATCCAT               TAGGC ATTAC GCTTA               TACATTGGTATTTTC  40 33
HC659_RS09325 NONE
HC659_RS09330 1862682 .. 1862700 +  -3.9  -3.48914   TATTGAATAAATTAA             TACGGAA TTAAT TTCTGTA             TTCCCTTTTGTTTCC  52 15
HC659_RS09335 NONE
HC659_RS09340 1866638 .. 1866661 +  -8.2  -2.54896   ACCCCTAGAATAAAA          AAGCTCATCT TTAA AGATGAGCTG           TACATTCCATAAAAA  65 123
        xylA NONE
        xylB 1871367 .. 1871394 +  -5.5  -5.66229   TGTTTACACACAAAT        AACCCCCTCAC ATTGAC GTGAAGGGGTG         TTTTTTATTGTTACT  88 325
HC659_RS09370 1874074 .. 1874090 + -10.9  -4.41895   TCAGAAAAATCAAAA              TCCCTCT GGT AGAGGGA              TTTTGATTCAGCATT  95 85
HC659_RS09380 NONE
HC659_RS09385 1877155 .. 1877170 +    -4  -3.28145   CCACTAATAATAAGC              CAAGTT AAAT GACTTG               TGTTCATTAATAATT  48 492
HC659_RS09395 1878301 .. 1878330 +  -5.9  -3.16944   AATAAGATCCTCACT       TTATCTGCAAGTGC TTA GTATTTGC-GATAA       TATTGCATTCGTAAT  58 210
HC659_RS09400 1879339 .. 1879358 +    -8   -5.4505   ATAATACATAAAAAA            GATTAACT CTAC AGTTAATC             TTTTTTATTCAGAAG 100 134
HC659_RS09430 NONE
HC659_RS09435 1882424 .. 1882439 +  -7.6  -5.64873   GAAAAAAACAAAAAA              GAGAGA TACC TCTCTC               TTTTTTATTCTTCGA 100 70
HC659_RS09445 1883443 .. 1883465 + -13.6   -5.4505   TTGATTTCTTTAAAA           GCATGATGAA ATG TTCATCATGC           TTTTTTATTGAGAAA 100 95
HC659_RS09450 NONE
HC659_RS09455 NONE
HC659_RS09460 1887568 .. 1887588 +  -4.8  -5.33866   ATGAATCCCAAGGAA           GAGAAG-GA AACC TCTCTTCTC            TTTTTTATGCATTTA  84 40
HC659_RS09465 NONE
HC659_RS09470 NONE
        yndJ NONE
HC659_RS09480 1891172 .. 1891195 +  -6.6  -5.58522   AGAGAAAATAAAAAG          TGCACAGGCC AAAG GGCAGGTGCA           TTTTTGTTTTGTATG  93 30
        pghL 1892156 .. 1892180 +  -7.2  -3.51091   ATAGCTACTGAAAAA          TAGGAGGC GATAAGACA GCCTCCTA          TTCCTTATGCTTCTC  67 30
        fosB 1893753 .. 1893784 +  -9.5  -4.45485   CTTTTTTTGAACAAC      AAACCCCCTC-TCC GTAAA GGAAGAGGGGGTTA      TTTTATGCATCTGAT  91 509
        yneA NONE
HC659_RS09510 NONE
HC659_RS09515 1895870 .. 1895896 + -11.7   -4.2535   ACTTCACTAATATAA         GAGGAATACGG CAATA TCGTATTCCTC         TTTTGCATATACTAT  91 31
         tkt 1898047 .. 1898068 +  -8.8  -5.42164   AGTAAGCTTTTGAAA           GAGGATGA GTCAAA TCATCCTC            TTTTTCTTGTTTATC 100 36
        sirA NONE
HC659_RS09530 1898979 .. 1899004 +  -9.2  -4.17023   AACATGGTTATAAAA         TAAAAAACCC TTATAC GGGTTTTTTA          TTTTGCAATCATTCA  85 65
        ccdA NONE
HC659_RS09545 NONE
HC659_RS09550 1901139 .. 1901160 +  -8.8  -5.63517   AAATGAATTAAAAAA           CCTTTCCT CTTGTC AGGAAAGG            TTTTTTATTTGAGAA 100 30
        acnA 1905593 .. 1905619 + -11.7  -4.83169   CTGATGAATCAATAG         GAAGAGAAGGC ATTTC GCTTTCTCTTC         TTTTTATGACACAAT 100 37
HC659_RS09580 1906151 .. 1906171 +  -6.2   -5.9873   GAAATGGAACAAAAA            CTGGATCT TGATT AGATTCAG            TTTTTTTTATACTCA 100 11
HC659_RS09585 NONE
        sspN NONE
HC659_RS09595 1906875 .. 1906888 +  -8.1  -6.02919   ACCGTTCTTAAAAAA               CCAGG GAAA CCTGG                TTTTTTTCTTTCTGA 100 30
HC659_RS09600 NONE
HC659_RS09605 1907692 .. 1907712 + -11.2  -5.54885   TCATTTGTAAAAAAA            GAACGCAC ATGAA GTGCGTTC            TTTTTTATTGGTATT 100 31
HC659_RS09620 1909261 .. 1909292 + -14.7   -5.0925   AATAGGTGCAGAACT      GCAAAAATCCTTG TAAATT CAAGGATTTTTGC       TTTTTAATTTTAAGA 100 36
        parE NONE
        parC 1914041 .. 1914079 +  -8.5  -5.28826   CATACAGAACAATAA  TAAA--AAACCCGCTCATA CTA TATGAGCGGGTTTCGTTTG  TTTTTTATCAGCTTT 100 26
HC659_RS09640 1916512 .. 1916536 + -15.9  -4.99435   TAAATATAAAACAAA          GCTGCATTCAA TAG TTGAATGCAGC          TTTTTCATTATTGGA 100 43
        eglS 1918313 .. 1918334 + -10.2  -4.95758   TAAGCTTTTTTTTGG           CGGACATC AGTAAC GATGTCCG            TTTTTATCATCTAAT 100 42
HC659_RS09650 1918654 .. 1918698 +  -5.2  -4.93079   GCAGTAAAATTTCAA TTTCTGTCTCACTAACTTAAG TATA CTTT-GATATTGAGACAGAAA TTTATTTATTTTGTT  76 52
HC659_RS09665 NONE
        galU NONE
HC659_RS09675 1924445 .. 1924479 +   -13  -5.63103   ACGATAGCTAGCGGA     TATGCATAGGGGTG ACTGACG CTCCCCTATGCATA     TTTTTTTACTTGCGA 100 34
        iseA 1979353 .. 1979371 +  -8.8  -5.41359   GTTATATAAGAAAAA             CGCCCG GGATAAG CGGGCG             TTTTTTAATTTGGTT 100 32
         ggt 1982613 .. 1982637 +  -7.9  -5.14965   AAATAAATAAAAAAA          CTGTACTCGCT TCA AATGAGTACAG          TTTTTTCATGCAGAT  93 35
HC659_RS09810 1984747 .. 1984774 +   -15  -3.35616   AATGGAATAAAAAAA        GAAACCGG-CTGG CAG CCAGACCGGTTTC        TCTTATATGATAATC 100 31
        gltC 1991918 .. 1991944 + -11.7  -5.61596   AATAAAAAAAATGAA        CCCGA-GCTTCT ATAT AGAAGCTTCGGG         TTTTTTTCTGCAAAT 100 36
HC659_RS09850 1995970 .. 1996012 +  -3.4  -4.56775   GCAGATAAGGATGAA TGAGATCCCGTTGTTACGAT CAG AATGGACAAATGGGATCTCA TTTTTCGAGGAGGCT  64 33
HC659_RS09855 NONE
HC659_RS09860 1997369 .. 1997394 + -11.3  -2.87931   TACTCTATTGTGAAA         CCAAGAGAATG ACGG TATTCTCTTGG          TCTGTGCCACATCCC  79 14
HC659_RS09880 NONE
HC659_RS09885 2004360 .. 2004372 +  -2.7  -5.07486   ATGAAACCTAAAGCT                TTTAG ATC CTGAA                TTTTTATTGAACCTC  70 347
HC659_RS09900 NONE
HC659_RS09905 2005878 .. 2005891 +  -6.7  -4.03586   GAAGTAAGCTGTTGA               GTTGC TGCT GCAAC                TTCTTGTATTTGAGA  70 349
        hpaB 2009137 .. 2009156 +  -7.1  -4.20024   AGAACATTGAAAAAA            CAGCGGG AAAAGA TCCGCTG             TTTCGTATTTTTTAT  75 31
HC659_RS09930 2012031 .. 2012059 +    -9  -4.95155   GCTACTGATATAAAA       GAGGC-CATGCGTT AAA AACGC-TGTGCCTC       TTTTTATACTATAGG 100 33
HC659_RS09935 2013310 .. 2013323 +  -3.1  -4.99645   TCTTTCATCTTACAT               GAAGG TCTT CTTTC                TTTTGTTTATCCAGT  70 372
HC659_RS09975 NONE
HC659_RS09985 2019961 .. 2019971 +  -8.2  -3.68738   TTTGACAAACTCATG                 CGCC GCC GGCG                 TTATCTCTTCAAATG  69 188
HC659_RS09995 2021878 .. 2021903 + -11.3  -3.08966   TAAACAATGAAAAAA         GCTAATGTCTG CATG TAGACATTAGC          TTGGCTGGCGTTTAG  79 130
         bla 2024471 .. 2024492 +  -9.5  -4.00042   CTTTTTTAACTCCTA           CCGTTCATT TTTT GATGAACGG            TTCTTTCATAAGACC  83 77
HC659_RS10030 2025891 .. 2025906 +    -9  -5.25799   GTTTAAACTTATAAA              GGAGCT TTTT AGCTCC               TTTTTCTCTTGTTTT 100 35
HC659_RS10050 2031550 .. 2031563 +  -8.1  -4.18018   ACAACAATTAAAAAA               GCCCT CATA AGGGC                TTTTGCATAAAACAA  79 30
HC659_RS10060 2032519 .. 2032534 + -11.8  -3.06862   ATTAAGCAGATCCAA              GCCCCC ATAT GGGGGC               GTTCTTATTATTGTA  83 36
HC659_RS10065 2033414 .. 2033456 + -11.6  -5.07523   CCATATCGCTTTATA TACCACCTCCT-CTTAG CTAATATGTT CTAAGTAGGAGGTGGTA TTTTGTTTGTATCTC 100 50
HC659_RS10080 2035156 .. 2035168 +  -4.9  -4.06281   CCATCCTTATATGTT                TAGTT AAA AACTA                TCTTTTATTTAGACT  63 19
HC659_RS10090 2036015 .. 2036031 +    -8   -4.7657   TGTTTAAACTTATAG              GGAGCT TTTTT AGCTCC              TTTTTCACCTTTTTA  88 34
HC659_RS10095 2036931 .. 2036956 +  -9.8  -5.88061   CCGAGATAAACCCCA         TACCCTTCTC TTGATT GAGGAGGGTA          TTTTTTTCGTTTTTT 100 32
        rapK NONE
        phrK 2038336 .. 2038360 +  -9.4  -5.22137   TGATTAATTAATTTA         GCCCTACTCAA ACAT TTGAGT-GGGC          TTTTATTTTATGATT 100 48
HC659_RS10120 2040383 .. 2040413 +  -2.6  -4.65168   ATTCACACGTAATCT       CTCTCTATCTTCTT TAA AAGAGGATATGTAG       TTTTTAGACTCTAAT  65 102
HC659_RS10135 2044979 .. 2045006 +  -9.2  -5.86976   GCAACTTTTTGTACA        GAGCCGGGGTGTT GGT AGCACCTCGG-TC        TTTTTTATTTTATGC 100 100
HC659_RS10160 NONE
HC659_RS10165 2053973 .. 2053985 +  -4.9  -2.80398   AAATTCATTTCACCG                TTACT AAA AGTAA                TCCTTGCATTCCTTC  50 443
HC659_RS10205 2059671 .. 2059710 +  -2.2  -4.68994   TACAATAAAGAAAAA  GACATCCTTGC-CCGCT AACAGCG AGTTAAGCAAGGATGTC  TTTTTCAATCATGCT  61 8
HC659_RS10215 2060926 .. 2060961 + -13.5  -3.36515   AGTCTATCAATTTAC    TGACAAAAGCCCAAA AATGAA TTTGGGCTTTTGCCA     TGTTTACACGTAAAA  95 42
HC659_RS10230 2063158 .. 2063170 +  -3.4  -3.15758   CAAGATATGCTGTAA                TGGT ATAAA ACCA                TTGATGGAGGGTTCT  47 61
HC659_RS10235 2064167 .. 2064188 + -10.3   -5.0133   GATAAACATTAATCA           GCTTGTAAA TTTT TTTACAAGC            TTTTTTAGCGCAATC 100 29
HC659_RS10240 2065391 .. 2065420 +  -9.4  -5.29445   ATGCCTGATGATAAA       GGAGGTCTTCTA ATATAC TAGAAGGCTTCC        TTTTTATTGTTGGAG 100 33
        desK NONE
        desR 2067238 .. 2067261 + -13.2  -5.08601   GGTTTAAATAAAAAA          GGATCTTGGC ATCT GCCAGGATCC           TTTTTGTTAACCTGA 100 30
HC659_RS10285 2073549 .. 2073565 +  -5.1  -3.67296   ACAATATCCATGCTC              GGAAATG AAG CATCTCC              TTTCCCTCGCTGATC  57 316
HC659_RS10295 NONE
HC659_RS10300 2074290 .. 2074319 + -13.7  -5.03994   AACAGTGTGGTGTAA       TAAGAACAGGGCG CACA TGCCCTGTTCTTG        TTTTTATATATAAAA 100 26
        dhaS 2077014 .. 2077030 +    -8  -6.04953   TGTATGTTTAAAAAA              CTGCTG CCTGC CAGCAG              TTTTTTTCTTTCTGT 100 43
        sqhC NONE
HC659_RS10325 2079846 .. 2079860 +  -3.4  -4.09864   AAAAAGCCCCCTTTC               CCCGGG GGC TCCGTG               TTTTAAAAAATCCCT  57 41
HC659_RS10335 2082399 .. 2082426 +  -8.5  -5.59534   AATATGCATCAAAAA        AGGTACATCAC TTTATC GTGATGTACCC         TTTTTTATTATCCTT 100 40
HC659_RS10380 NONE
       rsbRC 2096524 .. 2096548 + -13.7  -4.90869   CTTAAAATTAAAAAA          GGTATAAGGCT TAA GGCCTTATACC          TTTTTGATTAATCAT 100 19
        gerT 2099414 .. 2099436 + -14.9   -5.5112   TCATCCGATAAAAAA           CGGCCTGCA ATCGA TGCAGGCCG           TTTTTTATTAATAGA 100 30
HC659_RS10425 2101881 .. 2101905 + -12.9   -5.1675   CCACAAAAAAAAGAA          GAGAGAGCTCC AAA GAAGCTCTCTC          TTTTTTCATAAATGC 100 53
HC659_RS10435 2103349 .. 2103373 + -14.4    -5.626   TAAGGATATGAAAAA          CCTTAGTCCG AAATC CGGACTAAGG          TTTTTTTATACAATC 100 38
HC659_RS10450 NONE
HC659_RS10455 2106788 .. 2106810 + -17.8  -5.89947   GGGCGCATAAAAAAA           CCATACGCGG CAG CCGCGTATGG           TTTTTTTTACATTTC 100 31
HC659_RS10465 NONE
HC659_RS10470 2109448 .. 2109472 + -12.2  -4.69549   ACCAGACACAATGAA          GCCCGCTTAT CTAGT GTAAGCGGGC          TTTTCATTTTAAATT 100 63
HC659_RS10485 2111421 .. 2111446 + -16.3  -4.53636   AGCCTTAAAACTGCA         GAAAACTGCGG GTTT CCGCAGTTTTC          TTTTCATTATGTCGT 100 33
HC659_RS10505 2113356 .. 2113385 +  -2.9  -4.18018   TTCTGTTCTATGGCC       GATAATGCGAAAG AGTT CTTTTCCATAATC        TTTTACATAAACAAC  58 427
        cgeA NONE
        cgeB 2124953 .. 2124972 +  -9.4  -5.84381   CGCTTTCTTGAAAAA            TCGTTCAT TGCT ATGAACGA             TTTTTTTATTCATAG 100 30
HC659_RS10595 2127566 .. 2127594 +  -9.6   -4.6526   AAAAAGGCATAAAAA        CAAGCCTGTCTA TCCAT TAGGCAGGCCTG        TTTTTAACAGTTTAT  91 29
HC659_RS10610 2129138 .. 2129163 + -10.5  -4.12902   AAACGGTGAAAAAAA         GCACATACCGA TATA TAGGTATGTGC          TTTTCGCAGTGCTTC  89 32
HC659_RS10650 NONE
HC659_RS10655 2136469 .. 2136489 + -12.6  -5.61596   AACAGTAACAGAAAA            GCGCAGTC TTCAC GACTGCGC            TTTTTTTATGCACGT 100 39
        metA 2146988 .. 2147000 +  -3.3   -4.0342   ATAACTCCTTACGAT                GCATG AAG CTTGC                TTGTTGTTGATTACA  57 213
HC659_RS10720 2148192 .. 2148214 + -12.8   -5.4659   TAATGGCGTACTTGA           GAGCATACGA AGA TCGTGTGCTC           TTTTTATTTATATTC 100 38
HC659_RS10725 NONE
HC659_RS10730 2148655 .. 2148674 + -13.6  -3.71107   GAGATGACAAATAGA            GGAGAGGC ATTC GCCTCTCC             TATTTGATTTTCATC 100 58
HC659_RS10740 2149272 .. 2149312 + -17.9  -2.84098   TCAGCTGGATGAATT  CAAAGAATAAAAACCGCAG CTT CTGCGGTTTTTATTTTTAG  TGATTGGTTAAGACA 100 16
HC659_RS10755 NONE
HC659_RS10760 NONE
        sspL 2151494 .. 2151535 +  -9.6  -3.05597   CAAAAAAAAGCAATA CAAAACGCTAGAGAGGATC TAAAC GATC-TCTCTAGCGTTCAG CTTTTCAAGCATACG  74 15
        kduI NONE
        kduD 2167972 .. 2167991 + -12.2  -5.16572   CTGACAAATAAAAAA            GCTGACGA ACGA TCGTCAGC             TTTTTTCCATTACAT 100 37
HC659_RS10860 2170563 .. 2170585 +  -9.2  -4.97402   GGCTGAAAGATGAAA           GAAGACGC ATGCAGA GCGTCTTC           TTTTTATGCGTTTTC 100 52
HC659_RS10910 2178502 .. 2178526 + -14.5   -3.6471   CTTTCCAAAAAATAA          GCATGAATGAA CGA TTCATTCATGC          TTCTATCATTTAAAA 100 16
HC659_RS10920 2179312 .. 2179338 + -12.4  -3.13382   CTATAAAAACGAAAA         GAAGACAGCC TTTTACC GGCTGTCTTC         TCTTGCAATTTCATC  87 52
        sspM 2180290 .. 2180312 +   -15  -5.04249   CGCCCTTCTACGTAA           GAAGCAAGGA ATT TCCTTGCTTC           TTTATTTTTTCAGCC 100 26
        recU NONE
HC659_RS10950 2184712 .. 2184734 +   -12  -5.14563   AAATTAAACAAAAAA           GCCGTCACCT TTG GGGTGATGGC           TTTTTTGGTACACAA 100 34
HC659_RS11045 2202402 .. 2202419 +  -4.1  -4.18908   TCATTCCATTTTTCA             TGAAAGC TTGT GCTTCCA              TTCTTTTGGACATCT  62 410
HC659_RS11230 2234087 .. 2234111 +  -9.4  -4.64846   ATCATAATACAAAAA         GCCC-AAACCA CATA TGGTTTTGGGC          TTTTATCATTTATCG  91 34
HC659_RS11320 2250504 .. 2250519 + -10.4  -5.68438   AAGTAACTAAAAAAA              GCTCCC GAAC GGGAGC               TTTTTTATTTAATGG 100 41
HC659_RS11330 2253184 .. 2253203 + -10.8  -5.97979   CCATAATTAAAAAAA            CTCAAGCT ATAT AGCTTGAG             TTTTTTTATTGTTCT 100 35
HC659_RS11410 2267892 .. 2267915 + -16.8  -3.60395   AACGCAGAAAAAAAA          GCAGAGGCTG ATGA CAGCCTCTGC           TTAATTATTGTATGA 100 15
HC659_RS11450 2273864 .. 2273876 +  -2.7  -3.32343   TATATTCCCGGCAGT                TGAAG ACT CTTTA                TTATAAAACTCTGAA  46 7
HC659_RS11465 2275834 .. 2275854 + -14.1  -3.10775   TGGCCAATAAAAAAA            GCTTCCTCT CTA AGAGGAAGC            CTTTTGCCTGCCGAT 100 126
HC659_RS11475 2277432 .. 2277449 + -12.7  -4.91657   ATTCAAATAGGAAAA             GCGCCGA AAAA TCGGCGC              TTTCTTTTATTGCTT 100 31
        ansR 2297842 .. 2297863 +  -3.1  -3.11761   AAAGTACAGGAGGAA           C-TGAGTTAA TCT TTAGCTCACG           GTTTAATTTTACCGT  47 17
        mciZ NONE
HC659_RS11615 2300765 .. 2300786 + -12.3  -4.69415   CTCATAGCAGAAAAA           CCAGCACCT GTAC GGGTGCTGG            TTTATTTATATTGAT 100 34
HC659_RS11625 2302094 .. 2302119 +  -9.8  -5.47159   CAACAGAATAAAAAA         GCGAAAG-GCC TCTTC GGCTCTTTCGC         TTTTTTATGTTACAG 100 30
HC659_RS11665 2306704 .. 2306717 +  -9.5  -3.27525   CTGTCAGTTCGTTCA               GCCGC TGAT GCGGC                TTCCCTTTGAAAACA  75 49
HC659_RS11670 NONE
HC659_RS11675 2308758 .. 2308805 +  -5.6  -2.85361   AATGCCCGTCTCCTC CGGCAAAAGGATGCC-TGTCTCG GTA CAACACACGATAACCTTTTGCCG TCAATTTTTCAGTCA  51 99
        proC 2314526 .. 2314546 + -14.1  -5.93252   ATGTAAGGACAAAAA            CAGAAGGCA CAG TGCCTTCTG            TTTTTTATTTTTCCC 100 41
        namA 2317392 .. 2317415 + -12.6  -6.20267   TGGTAATGCCCATAA          GAGATATCCT GTAG AGGATATCTC           TTTTTTTATTTTTAG 100 35
HC659_RS11720 2318464 .. 2318486 + -10.8  -3.30441   ATTAACATCTCCTTA           TAAAACGTAA TGA TTACGTTTTA           TTATACAACGTCATC  82 236
HC659_RS11735 2321162 .. 2321189 + -13.6  -5.04385   AATAAGAAGAAAAAA        GCCGAAAATGTT TACA AGCATTTTCGGC         TTTTTTGCAGCTGTC 100 39
        mifM NONE
        yidC 2325260 .. 2325285 + -11.2   -5.5604   GGTGAAATAAAAAAG         CAACCCCGTGC GAAAA GC-CGGGGTTG         TTTTTTGTTACTTGC 100 31
      prli42 2329661 .. 2329671 +  -2.4  -3.35342   CCAAGCGGGTTATCA                 GGAG ATC CCCC                 TTCAATATTTTTCTT  45 316
HC659_RS11815 2335033 .. 2335049 +  -4.3  -3.07962   TGCAAATCCGTTGAC              TCTCCCC TAG GAGGAGG              TCTTACAGTATAAGG  50 66
         bmr 2336266 .. 2336302 + -19.7  -4.12254   GCCAGCACGTGATAA    GAAGCGCATTCTTTGTG TAC TGCAAAGAATGCGCTTC    TTCTTTATACTGATG 100 29
        bmrR 2337180 .. 2337214 + -13.2  -5.72254   TGAATAATAGAAAAA     GAGCATTTTTTGAA ACAAAAC TTCAAAAAATGCTC     TTTTTTCTTATTTAG 100 34
HC659_RS11870 2347697 .. 2347714 + -12.7  -5.83226   GATAGCTGAAAAAAA             GCCGGAG AATG CTCCGGC              TTTTTTTGTTGCATT 100 36
HC659_RS11920 NONE
HC659_RS11925 2357996 .. 2358019 + -15.4  -5.24449   AGATTAATGTGCAAA          GACTGCCGAA ACGA TTCGGCAGTC           TTTTTTCCCTTTATA 100 34
HC659_RS12065 NONE
HC659_RS12070 2382913 .. 2382931 +  -6.7  -6.19302   CTGTCCGTCTTTTAC             CTAGCTC AATCA GGGCTAG             TTTTTTTTGTTGTGT 100 66
HC659_RS12090 2385812 .. 2385832 + -14.1  -5.48623   AAGAAATAAAGCAAA            CAGCTGTCT GGT AGACAGCTG            TTTTTATTTATCTTT 100 32
HC659_RS12110 NONE
HC659_RS12115 2392718 .. 2392740 +  -4.2  -3.41229   CATTCGACATCATTC           TCGTTTTTTT TGA GAAAATACGA           TTATAATAAAGGTAT  53 50
        sinI NONE
        sinR 2393410 .. 2393444 + -13.8  -4.42386   AGAAAATCACAAAAA    GAGGAGT-AGTGCCT GAGCAG AGGCACTAACTCCTC     TTTTGTCAATAACCA 100 17
HC659_RS12145 2396270 .. 2396305 +  -8.5  -4.46835   ATATTAGAAGAATAT    C-AATAAGGTCCTCCA TTTTT TGAAGGACCTTATTCG    TTTATTTGCGGTTAT  86 20
HC659_RS12200 2403336 .. 2403364 + -11.1  -2.80821   ATAGAAGTAAAAAAA        GCTGAATAGCC CGTGAAA GGCTGTTCAGC        TGCTATCTTTCAAGA  79 17
HC659_RS12210 2404410 .. 2404449 +  -7.9  -4.77036   TGAACAGGTGAAAAA  CCGAAGACAAGCTGATT CGAATA AATCAGCGGATCTTCGG   TTTTTCATCATGCAG  88 41
HC659_RS12220 2405324 .. 2405348 +   -13  -5.44119   CATTAAATGCAGAAA          GAGACAAACC TTATC GGTTTGTCTC          TTTTTTTACAATGAA 100 35
HC659_RS12230 2406322 .. 2406343 + -13.1  -4.97405   AACCGCACATTAAAA           CCTGTATCC GATC GGATACAGG            TTTATTTTTATGGCT 100 28
HC659_RS12295 NONE
HC659_RS12300 2417618 .. 2417634 + -12.3  -5.52384   AACACGATAAAAAAA              CAGGCTG ACT CAGCCTG              TTTTTTTCATCCAAA 100 31
HC659_RS12350 2428009 .. 2428021 +  -3.5  -5.04325   GTAATTAATAAAAGT                TAAAT TAT ATTTA                TTTTTATCCTTTAAG  70 23
HC659_RS12360 2429470 .. 2429480 +    -4   -3.9009   TCGGCGAAGACACTG                 TTAC AAT GTAA                 TTTGTAAAATAAATT  56 64
        ispG 2430674 .. 2430710 + -16.2  -3.02511   AATTAAAAGAAGAAA   CACAAAAAGCTTGACGG GAAC CCGTCAAGCTTTTT-TG    TGTTAGAAAAATGGA 100 12
HC659_RS12375 2431814 .. 2431846 +   -15  -2.91429   ATACGCGTCAATAAC      TGAAAAAGGAGCCC AAACC GGGCCCCTTTTTCA      TATATACGCATTTTA 100 23
HC659_RS12390 2433683 .. 2433714 + -14.7  -3.27766   AAACAATTTACAAGC      TAAAAAATGGGGG TGTTAT CCCCCATTTTTTA       TTGCTGTAAAATCTT 100 23
HC659_RS12405 2436904 .. 2436919 +  -6.1   -5.1167   GAATGCAAGAATAGA              GCCGT TTGATT ACGGC               TTTTTATATTGCCTT  83 86
HC659_RS12410 2437907 .. 2437927 + -11.2  -5.61596   AGTAAAAGCAAAAAA            CTGAGGCT GTAAA AGCCTCAG            TTTTTTTATAGAAAT 100 22
HC659_RS12540 2462078 .. 2462099 +  -2.9  -5.15969   CGGCTAAATAAAAAA           CCGGTACAT TTTA ATGCACCGA            TTTTTTAGGTTAAGA  70 30
        rpsT 2476522 .. 2476543 + -10.9  -5.77856   TGCATAATATAAAAA           CGATCCTCA ATAA TGGGGATCG            TTTTTTTCATTTCTT 100 34
HC659_RS12620 2477949 .. 2477970 +  -8.7  -5.31059   AACAGCGACTGCCCG           GGCTGCTGA TTTC TCGGCAGTC            TTTTTTAGTTCGTCT 100 39
HC659_RS12640 2482525 .. 2482546 + -11.7  -5.04601   AAGCATTTTAAAAAA           CCATCGTTT TAGG AAACGATGG            TTTTTGATTTCTGCG 100 83
HC659_RS12685 2488289 .. 2488299 +  -5.4   -4.3739   ACATGTGAAGCGCCT                 CCTT AAT AAGG                 TTTTATAACAGCCTA  70 268
HC659_RS12700 2490897 .. 2490922 +  -3.9  -5.71712   GAAGGTGCCAAAAAA         ATAAGGAGGCT TGTT GGCCCCCTTAC          TTTTTTTCTGTCGCA  85 22
HC659_RS12710 2492767 .. 2492786 +  -9.3  -4.24413   AGGATTGTAACAACA            GAGGCTC AAGAAA GAGCCTC             TTCTTTATTACTGCA  86 31
        rapE NONE
        phrE 2500903 .. 2500918 +    -9  -5.42164   TTCTGATTCCCTTTA              GCCGTT TCAT AACGGC               TTTTTCTTATTTCTA 100 59
HC659_RS12765 NONE
        yqcG NONE
        yqxf 2503723 .. 2503749 + -13.8  -5.04868   AGAAGAGTCACTTTA         TAAGCCCCTCTC AAT GAGAAGGGCTTA         TTTTATTTAATTTGA 100 53
HC659_RS12780 2504255 .. 2504276 +  -3.7  -5.97575   GTTGGACTAACCTTA           GTTGAAAAG CCTG CTTCTCGAC            TTTTTTTTCTAGGTT 100 321
        txpA 2518839 .. 2518872 + -13.4  -3.72407   GGGTAGTTTCTTTTT     TAAAAGCTAGAGTG CTGCCA CACTCTGGCTTTTA      TATTTTAGCATTTCT 100 35
        bsrH 2519399 .. 2519418 + -10.7  -4.21317   GCCAACATTTATACT            GACCCGG CGGCAA CCGGGTC             TCTTTTATTTTATGC  90 126
HC659_RS12970 2532998 .. 2533019 + -13.1  -4.10717   CTGCACATCCAAGCC           GAAGGAGGA GATA TCCTCCTTC            TTGTTTACCTTTTTA 100 42
        sknR 2539781 .. 2539797 +  -3.7  -5.51353   TGAATCCTTTACAAA              CCCTT ACGTGAC AAGGG              TTTTTGTTGTTTTTC  81 153
HC659_RS13055 2542096 .. 2542116 +  -3.3  -4.36914   ATTGAAAAGCGGGCG            CTGATGAAG ATG TTTCATGAG            TTTTATCGGGCAGAG  62 355
HC659_RS13065 2542643 .. 2542660 +  -9.9  -2.71177   AACAAATAAAAAAAC             CGATGGT TTGT ACCATCG              ATCTGTTTTCTATAT  74 388
HC659_RS13095 NONE
HC659_RS13100 NONE
HC659_RS13105 2548173 .. 2548231 + -25.8  -2.86242   GGAAGGTAATAATGA TGTTTAAAAGGTGTTTTGATCCCTGTCT CAT AAACAGGGGTCAAAACACCTTTTAATCA TCGGTTTCTTTTCTG 100 105
         blt 2558584 .. 2558595 +    -3  -4.54047   ATGATGCTGCAGCTT                TGAA TTAA TTCA                 TTTTCTATAAAGTCA  62 18
        bltD 2559296 .. 2559321 + -11.3  -3.62176   CTGCAAGTTAAAAAA         GCCTG-GATGAA AAT TTCATCTCAGGC         TTTAAGCATCTTATT  84 103
HC659_RS13200 2563159 .. 2563185 +  -6.7  -2.94454   TTCACGCAAAAAATA         GAGCAGTAA ACATGTGAG TTACTGCTC         TGCTTCGTTTATTCA  60 113
        gltR 2567267 .. 2567289 +    -7  -5.16071   GTATAGAGCAAAAAA           GCAAACTTCG GTA TGTAGTTTGC           TTTTTCTTCGTGATT  90 124
HC659_RS13290 2578451 .. 2578473 +  -6.3  -5.89827   TTGATAGAGCAAAAA           GCAAACTTC GACAG GCAGTTTGC           TTTTTTTTCGTAATT  93 51
HC659_RS13300 2580716 .. 2580732 +  -7.9  -5.38497   TCGATAGTCTTAAAG              GGGGCTT AAC ATGCCCC              TTTTTTCATTTCAAT  95 82
HC659_RS13305 2581337 .. 2581367 + -14.9  -5.52096   TTACCTCATATCCAT       CAGACGCCATAAG AAATC TTTATGGCGTCTG       TTTTTTATTAGATTT 100 50
HC659_RS13325 2584424 .. 2584448 +    -8  -4.12188   TATCATATTAAGAAA         GACAAGAG-CA TGTT TGTCTCTTGTC          TTTTCCACATCATGC  76 90
HC659_RS13340 2588392 .. 2588412 +  -8.4  -4.29845   TACTGCAAATAAAAA            GATACCAA CATCA TTGGTATC            TTTTAGATTGAGTTC  81 234
HC659_RS13350 2590002 .. 2590025 +   -14  -4.96848   ATAAACAAAACGGAA          GCACTGATGA AAAA TCATCAGTGC           TTTTTATATGGCGAG 100 37
HC659_RS13355 2591253 .. 2591279 + -12.4  -3.22298   TCATCGCAGCAAAAA         CCATACCAACTA TTG TTGTTGGTATGG         TTCGTCCTAGATAGG  87 330
HC659_RS13380 NONE
HC659_RS13385 NONE
HC659_RS13390 NONE
HC659_RS13395 NONE
HC659_RS13400 2595897 .. 2595910 +  -2.4  -4.10453   TTTTAGGCCTGCTTT               TGAG CTTTGC CTCA                TTTTCACGCAATTTC  55 341
HC659_RS13410 2596667 .. 2596686 +  -9.4  -4.14004   TTTAAAAAACCCTTG            CCTTAAAG CAGA CTTTAAGG             TTTATCGTTATGTTG  85 49
        adhA NONE
        yraA 2598470 .. 2598494 + -12.2  -5.09426   TTAAAATAACAAGAA          GGCACAGACT GTTCG GGTCTGTGCC          TTTTTTAAAATTAAG 100 32
HC659_RS13455 NONE
HC659_RS13460 2608415 .. 2608439 + -10.1  -5.07275   GTGAAATAAAAAAAA          GACAAGGGA TACTCAC TCCCTTGTC          TTTTTATATGTGTCA 100 32
HC659_RS13470 2610142 .. 2610166 +   -13  -5.64274   CTCTTACCCCAAAAA          CAAGGCTTGT ACAAA ACAAGCCTTG          TTTTTTTATGCATAA 100 51
        sigV 2610794 .. 2610808 +    -5  -3.18264   GCGCATTCAGTTGAC               GAAGGA GGA TCTTTC               TTAATGGATAAGAGA  53 7
HC659_RS13480 2611678 .. 2611699 +  -4.5  -4.72127   TCGATAAAATAAAAA           CATCCAT CTAAGATT ATGGATG            TTTTCTCTCTTCTCT  71 34
        oatA 2613690 .. 2613706 +  -2.2  -5.73563   GAAATCGTAAAAAAG              AGATCC TATAC GGATCA              TTTTTTTACTTTAGT  80 31
HC659_RS13490 2614320 .. 2614342 + -16.4  -4.90471   TCATATGCAAAGCAA           TCCCGCCAAT CTG ATTGGCGGGA           TTTTATATTTTACAT 100 237
        fdhF NONE
HC659_RS13535 2625121 .. 2625142 + -10.2  -5.84381   ACAATAACAGAAAAA           CAGCCATC TCTGAT GATGGCTG            TTTTTTTATTCGTCG 100 34
HC659_RS13565 2629346 .. 2629378 + -19.3  -4.75954   AGCTGAAGCCTAAAA      CAAAAGCAGCCGGTT TTA ACCCGGCTGCTTTTG      TTTATTTTAGCTTTT 100 28
HC659_RS13635 NONE
        glnH 2644397 .. 2644423 + -10.9   -2.8372   GAATAACAACCATCC         CGGGATGAGCA GGCGA TGCTCATCCCA         ATTTGATAAGGAGTG  79 35
HC659_RS13645 NONE
HC659_RS13650 2645776 .. 2645797 + -11.7  -4.74103   GGCAAACATAGAAAA           GGATACTCT TTGG AGAGTATCC            TTTTTGCATTAAAAC 100 30
HC659_RS13695 2654058 .. 2654096 + -14.8  -3.08415   TGAAAAGAAAATAAA   ACAAAAAAACAGCCTTGA TCA TCAAGGCTGTTTTTATGC   ATTATTTATCCTTCA 100 27
HC659_RS13725 2660511 .. 2660526 + -10.4  -6.09196   CTTCCAATAAAAAAA              GCTGCC TTTT GGCAGC               TTTTTTTATTTTGAA 100 31
       spoVB 2671903 .. 2671918 +  -3.2  -3.76778   CATCAAAATTATAAC              GCTGTG ATTT CATGGC               TTCTTCGTCAATTTT  53 352
HC659_RS13780 2672816 .. 2672861 + -14.2  -3.01416   GGGGAAACAGGTCTT CCACATAAAAAAGAGCGGGC TCACTT GCCCGCTCTTTTTTGTTTGC TATGTATAGCTCCTG 100 18
HC659_RS13830 2681211 .. 2681254 +   -14  -5.42514   AAAAGAAAATATTCT TAAATCAAAAAGGCAGCCGC ACAA GCGGCTGCCTTTATCATGTA TTTTTTACTTTCTGA 100 23
HC659_RS13840 NONE
HC659_RS13845 2682065 .. 2682087 +  -9.1  -5.93252   GCCTCTGTAGAAAAA           CGCAGCGTA GTCGA TACGCCGCG           TTTTTTCTTTTTCCC 100 31
HC659_RS13850 2683689 .. 2683713 +  -8.5  -5.24531   CTGAACATACTAAAA          CCGGCCCGA TATGACC TCGTGCCGG          TTTTTTATGAACGAT 100 37
        nifS NONE
HC659_RS13890 2691876 .. 2691889 +  -8.1  -5.38249   TAAAGACTAAAAAAA               GCCCT CTAG AGGGC                TTTTTTATAATTGGT 100 31
HC659_RS13915 2695457 .. 2695478 +  -5.8  -5.12617   ATATTGCAAAAAAAA           CTCCAGTC ATCATC GACCGGAG            TTTTTTGAATCATTA  83 112
HC659_RS14000 2710594 .. 2710606 +  -4.9  -5.55695   AAGACGTGGACTCGT                TTTCA GCC TGAAA                TTTTTTCTCTTGTTC  88 61
HC659_RS14045 2720475 .. 2720508 +    -7  -5.53991   AATCTATACGATAAA    T-A-AAACCGGTAGAG GATC CTCTACCGGTTTATCA     TTTTTTTGATCGCTC 100 27
        cotQ 2738749 .. 2738771 +  -2.6    -5.093   TAAAGAATACCACAA           GGGCCGAA CATCTAT TGCGGTCC           TTTTATTGTTTTAAA  70 38
HC659_RS14120 2739375 .. 2739411 +  -6.1  -5.80817   AGACGGCTTTATAAG   GATAGATAAGTGCAGG GGAAGG TCTGT-CTTATCTATC    TTTTTTTATATTCAC  93 40
HC659_RS14125 2740390 .. 2740414 +   -13  -5.50723   ACCGACAACAAAAAA          CCTCAAATCC TAAAT GGATTTGAGG          TTTTTCTTTTGGTAC 100 50
HC659_RS14190 2750087 .. 2750129 + -18.1  -2.71364   ATGAAAGACCCAGTG TAATCAAAAAGGCGGTGACT GCAT AGTC-CCGCCTTTTTGATTG TCATTACACAGCTGA 100 23
HC659_RS14265 2767587 .. 2767608 + -13.1    -5.252   CGTTCATAGAAAAAA           GCTTGCAGA TTTC TCTGCAAGC            TTTTTTATCAGCCTC 100 32
        sspI 2772523 .. 2772540 + -10.5   -5.9218   GAATAAGACATGAAA             CCGGGTG ACAG CGCCCGG              TTTTTTTCTTATATA 100 35
HC659_RS14295 2773747 .. 2773764 +  -2.7  -2.75708   CTTTGCTTTTTTTCT             CTTACAA TAGA TTGGAAG              CGTTTTTTGACAGGG  42 84
        glcD NONE
HC659_RS14305 2776539 .. 2776563 + -17.3  -4.50943   AAACATCATGAGAAA          GCCCAAAACAG ACA CTGTTTTGGGC          TTTTGTGCGTTATTC 100 30
        ysdB 2792473 .. 2792499 +   -16  -4.87665   AAACTCGCAAAAAAA         GCAGAAGAGCGT TAA ACGCTTTTCTGC         TTTTTATAAATCAAA 100 11
HC659_RS14400 2795074 .. 2795094 + -12.6  -3.41602   CATAAAATAAAAAAA            GCCAAGGC ATTCA GCCTTGGC            TTATCCTCCGATCAG  93 36
HC659_RS14425 2799825 .. 2799850 +   -12  -5.95449   AGAGAAATAAAAAAA         GCATGATCTC TTCAAT GAGATCATGC          TTTTTTATTTTATTT 100 31
HC659_RS14475 2810595 .. 2810613 +    -3  -4.07568   GATGGAAAAACAAGA             TCGGCAGG AAG CCTGACAA             TTTTAAAGGAGGAAA  55 10
HC659_RS14480 2811488 .. 2811508 + -14.1   -5.5208   TTAATGGCAAAAAAA            CACCGTTCA ATA TGAACGGTG            TTTTTTGTATTATGC 100 37
        ytvI 2824881 .. 2824906 + -12.6  -5.68438   TCAGCAAAAATAAAA         CGGCAGCCGT TTTTTC ATGGCTGCCG          TTTTTTATTTGATGA 100 28
        ytrH NONE
        ytrI NONE
HC659_RS14585 2836490 .. 2836512 +  -8.5  -2.73829   ACAGATGAACACTAA          GAG-AGAGGG TCTC CCCTCTACTC           GTGTTCTTTACATAA  65 26
HC659_RS14595 2837876 .. 2837904 +  -7.5  -3.96483   GCTGAAAGAGATCAC       GCGTAAGGGGCG CCTGAA CGTCCCTTA-GC        TTCTTTCCATCAGCT  74 20
HC659_RS14665 2850479 .. 2850504 + -11.9  -3.63968   CTGAAAAAATAAAAA         CCACCTCCTGA TTCA TCAGGAGATGG          TTTCACGGTTTAAAG  90 41
HC659_RS14735 2862639 .. 2862668 + -18.1   -3.0558   CTTTTTTATAGAAAA       TAAAAGGACAGGC TAAT GCCTGTCCTTTTA        TGATTTCTCATATAC 100 30
        brnQ 2870243 .. 2870264 + -13.7  -4.13767   GTTAATGTCACAGAA           CGCCTGCGT TATT GCGCAGGCG            TTTTGCAATGAAAAA 100 36
        hisJ 2873202 .. 2873222 +  -8.3  -4.99861   AAAATGAGGCAGCGG            CAGCGTTAA ATA TTCACGCTG            TTTTTCTCCTTCCTC  91 208
HC659_RS14785 2874265 .. 2874289 + -10.1  -6.17669   CGCAGTAATATAAAA          GCCCAAAAC TGATATC GTTTTGGGC          TTTTTTTATTTTATT 100 33
        rpsD 2876944 .. 2876966 + -12.6  -5.69473   TAATCGTTTTAAAAA           CCCCTGCCGC TAT GCGGTCGGGG           TTTTTTTATCGTCTG 100 38
        acuA NONE
HC659_RS14820 NONE
HC659_RS14825 2883168 .. 2883187 +  -8.6  -5.25735   GAACAAAGTAAAAAA            CGACCTTT ACGA AGAGGTCG             TTTTTGATTTTTTAA 100 30
HC659_RS14895 2895808 .. 2895843 +  -4.7  -4.37886   CAGAATAAGAAAAAA    GCTTGTCGATCCGGGC TTACT GCTCGT-TCAACAAGC    TTTTATGAAACCTAC  68 33
HC659_RS14905 2897426 .. 2897449 + -12.4  -5.60689   ACAAGCAAAAAATAG          AAGCCGCTGC CTAC GCAGCGGCTC           TTTTTTATTATATCG 100 47
HC659_RS14925 2901452 .. 2901471 +  -9.3  -4.12188   TGCCGTACATGCTCA            GCCAGCT CTCCCA AGCTGGC             TTTTCGACGTAGTGG  80 196
        cysK 2907995 .. 2908030 + -15.6  -4.10161   TGGTCATTTATTTAA    AAAAAGGACTGGCTTC AGCA GAAGCCGGTCCTTTTA     TTTTGCAAGCTCGTA 100 26
        pbuO 2910829 .. 2910848 + -12.2  -5.36441   ATGCATACAGAAAAA            CCCAAACG TCGC CGTTTGGG             TTTTTTATGTAAACA 100 40
HC659_RS14980 2913323 .. 2913343 + -12.6  -4.94902   TGCTTATAAATAAAA            CCCCGCAT TCGGT ATGCGGGG            TTTTTGTCATGCTTG 100 120
HC659_RS14995 2917217 .. 2917231 +  -8.5  -3.78124   TGCAGGGCTAAATGC               CGGGC AATAC GCCCG               TTCTTAATCATTACT  74 4
        opuD 2918973 .. 2918998 + -16.3  -5.28942   CATATTAACAAAAAA         GATCTTTCCGC GCCT GCGGAAAGATC          TTTTTATTTGCGATA 100 33
HC659_RS15035 2926373 .. 2926397 +  -9.4  -4.60255   GAAGCATGTAAAAAA         CCCAAAACCGC TTGC GCG-TTTTGGG          TTTTTCCAACATTAT  91 30
HC659_RS15090 NONE
HC659_RS15095 NONE
HC659_RS15100 NONE
HC659_RS15105 NONE
HC659_RS15110 2942793 .. 2942814 + -10.2  -5.52347   GAATACAAATAAAAA           CTAGGGGA CCGCTC TCCCCTAG            TTTTTTGGTTTTGTT 100 29
HC659_RS15130 2947637 .. 2947681 + -19.7  -4.12902   GGGATCTTTCAGATT GTTGACAAAATCCTAAAATGG TTT TCATTTTAGGATTTTGTCATC TTTTCAGCGTGATTG 100 61
HC659_RS15140 2949974 .. 2949992 + -13.2  -5.19879   AACGATAAACAAAAA             GCTCCAGA ATG TCTGGAGC             TTTTTCTGTTTCACA 100 33
HC659_RS15205 NONE
        mraW 2962137 .. 2962161 +  -9.4  -5.67283   GCCATCGAAAAAAAA          GCTCAGATCA GCAAA TGATTTGAGC          TTTTTTCTTTGAGTT 100 8
HC659_RS15225 2964878 .. 2964890 +  -3.3  -5.93809   GATATTTCGTTCGCT                GGCAG CAG CTGCA                TTTTTTTTATGAAAC  88 292
        pckA 2971727 .. 2971756 + -13.7   -4.4078   CTCGTATAAAAAACA       AAAGCCAAGAGCA ATTA TGCTCTTGGCTTG        TTTTAATTGACGGAA 100 32
HC659_RS15260 NONE
HC659_RS15265 NONE
HC659_RS15270 2975569 .. 2975586 + -12.7   -5.4833   GGAGGACATAAAAAA             CCCGGCA CATG TGCCGGG              TTTTTTATTCAATCC 100 30
        ytzI 2977621 .. 2977635 +  -6.4  -5.58454   TTGGACTTTTAAGGT               CGGCAT GCT ATGCTG               TTTTTTTGCTGTGAC 100 94
        yidD 2979016 .. 2979046 +  -5.5  -3.36694   AACGTTTTCAGGGAA      CAGCGGGTGATGTT TAAT AACATC-TACGCTG       TCTTTCACACTCGCT  56 109
HC659_RS15320 NONE
HC659_RS15325 NONE
HC659_RS15330 2982673 .. 2982699 +   -11  -4.74706   GATTTGTAATTAAAA         GAAAGAGCTG CGTCAGC CAGCTCTTTC         TTTTTGCATGTTGAG 100 32
HC659_RS15385 2995333 .. 2995355 + -14.2   -4.4267   ATCTCCACGCTGATT           GAACCCCCGA TTA TTGGGGGTTC           TTTTCCGTTTTCAGC 100 24
HC659_RS15395 NONE
HC659_RS15400 NONE
HC659_RS15405 2999799 .. 2999822 +  -7.4  -5.52384   AAAACATAAAACCTA          CAGCTCGTGT TGCA AAACGGGCTG           TTTTTTTGCTGCAGA 100 32
        cotI 3003777 .. 3003793 + -10.8  -4.04579   TTAAACCCATCATTT              CCCCCG CATAT CGGGGG              TTTGATCTTTATAAG  89 37
HC659_RS15430 3004322 .. 3004338 +  -5.8  -4.63527   CTGTGAACAAAAAAA              GCCGTT TATAC AGCGGC              TTTTTCACATCATCG  76 35
        thiT 3020511 .. 3020535 + -17.2   -4.9755   GCGTAAAAGTAAAAA          TCCCCCAGCG AATTC CGCTGGGGGA          TTTTTCGTTATCTGT 100 35
HC659_RS15600 3023792 .. 3023837 + -16.5  -2.95515   ATGAAAGAAATTAAA GAAAAGATAGAAAGGGCCTGAT TTA ATCAGACCCTTTCTG-CTTTTC GTTTGACTTTTCGCT 100 5
        gbsR 3027932 .. 3027949 +  -9.1  -5.58454   AAGTAAAGCAGAAAA             CGCCTGG GAAA CTAGGCG              TTTTTTTGATGTAAC 100 35
        bslA 3028673 .. 3028690 +  -9.1   -5.2696   GCAACTAATGTAAAA             GACCGGT TAAC GCCGGTC              TTTTTTGCGTTTTAC 100 33
        ktrA NONE
        ktrB 3031046 .. 3031084 + -14.2  -3.13475   GTTTACAGGGTGATA  TCA-AAAAAATCCGGCG TGCAGT CGCCGGATTTTTTATGA   TTCGATATGAGATTG 100 28
        cdoA 3035221 .. 3035242 +  -8.8  -4.67234   AATTGACAGAAAAAA           TAAGGCTC GGAAAA GAGCCTTA            TTTTTCGACTTACAT  90 281
        iolU 3038515 .. 3038542 +  -9.9   -5.4505   TCAAGCTTAAAAAAA       TCCGCCCGCGTGC AAAT GC-CGC-GGCGGA        TTTTTTATTAGACAA 100 31
HC659_RS15725 3053929 .. 3053977 +  -8.8  -3.62864   TGTTCCGTCTCTTTT CCGCATCGTCCGCTAAAAAGCC CCATC GCCTATTTTCCGGACGATGGGG TTTCAAATGCCTTTC  75 10
        mstX NONE
        kbfO 3060759 .. 3060786 +  -9.2  -3.25169   ATGATCGTATTCCCA        GCCGC-CGTTTAT CAC ATAACCGAGCGGC        TTCATCACTTGTTCC  70 331
HC659_RS15800 3065742 .. 3065791 +   -14  -4.67552   CTGAAATAGGATTTT GCATGAAATCAAAAGCACCGAACA TTCC TGTCCGGTGCTTTT--TTTCATGC TTATTTTTTGATAAG 100 54
HC659_RS15820 3069022 .. 3069036 +  -7.1  -5.41143   TATCAATTAAAAAAA               CCGGT GCTGA ACCGG               TTTTTTTAAGGCGTG  95 31
        patB 3070567 .. 3070594 +  -7.8  -3.71848   AATATAGCTGTTAAA        CGCCTTTACG TCTTCATT TGTAAAGGCG         TTCTTAATAAAGGAA  72 40
        kinB NONE
        kapB 3072398 .. 3072419 +  -6.6  -4.62069   TTTAACCTGCCATAA           CCCAGTCT GACAAA AGATTGGG            TTTTTCACGTCGCGC  78 26
HC659_RS15855 3074447 .. 3074457 +  -3.2  -2.66593   TTCCGAGAAAAAACT                 GAGG AAT CTTC                 TAAATTTAACCTTCT  43 41
HC659_RS15860 NONE
HC659_RS15865 3076868 .. 3076911 + -21.4  -4.12902   TAGCCATCACAGATT GTTGACAAAATCCTAAAACG GCTT CGTTTTAGGATTTTGTCATC TTTTCAGCGTGATTG 100 61
        maeL NONE
        maeM 3080077 .. 3080101 + -16.5  -4.83269   ATATCTATAAGAAAA          CGCACTGCTCG CTT TGAGCAGTGCG          TTTTTCCTGTCATAT 100 31
        nupN 3081634 .. 3081660 +  -8.1  -4.82111   TGAATAAGAATCGCA         GGGATAAGG AGGTCGAGC CCTTATCCC         TTGTTTTTCTTTTAT  95 34
        nupO NONE
        nupP NONE
        nupQ 3085241 .. 3085265 +  -6.4  -5.67063   AAGATAAAACATTTT          CCCCTGGGAA GACGA TTCTCAGGGA          TTTTTTTCTAATCCA  93 34
        maeN 3086741 .. 3086763 +  -9.9  -6.08342   CTTCATAAACAGAAA           GAGTTCCGT TTTAT GCGGAACTC           TTTTTTTATTTATTC 100 33
HC659_RS15915 NONE
HC659_RS15920 NONE
HC659_RS15925 NONE
HC659_RS15930 NONE
HC659_RS15935 NONE
HC659_RS15940 NONE
HC659_RS15945 3092991 .. 3093016 +  -7.6  -6.08342   ATTTATAAAAATAAG         CAGCCGGA CAGGCAGAGT TCCGGCTG          TTTTTTTATTTCTTG 100 33
HC659_RS15980 3098252 .. 3098275 +  -4.5  -4.40173   ACAAACACCGAAAAA          GACCGCAAC GCTAAA GTTGTGGCC           TTTTCGCTTTGTCAT  66 44
HC659_RS15985 3099141 .. 3099154 +  -3.9  -4.42386   CAGCATAATGGCCTG               TTGAA TGCT TTCAA                TTTTCTGGCTCAAAC  64 451
HC659_RS16025 3104876 .. 3104898 +  -2.7  -4.72272   CGCTTAACTGAAAAA          TAGGACGTCC CGGT GTACG-CCTA           TTTTTCATGCGCAAG  65 23
        adeR 3118864 .. 3118893 + -16.7  -6.17669   TATCAAACTTCGGCA       CATGGATTTGTGA AATT TCACAAATCCATG        TTTTTTTATTTTCTT 100 13
         ald 3120126 .. 3120149 + -11.8  -6.04324   CTTAATTCACAATGA          GCTTGCAGAA AGAT TTCTGCAGGC           TTTTTTATTTTTTAA 100 36
HC659_RS16085 3120915 .. 3120935 + -11.2  -4.74801   CGTAAGATAGAAAAA            GAGACTGC GGCAA GCAGTCTC            TTTTTGATACGATTA 100 36
HC659_RS16130 3135567 .. 3135588 +   -13   -4.8048   ATCATAACGAGAAAA           GGCTCCCC AGTAAA GGGGAGCC            TTTTTCCTATAAAAC 100 67
HC659_RS16145 3139212 .. 3139233 + -11.5  -5.00196   TTTCATGTAAAAAAA           CGCTCCTGC TTTC GCTGGAGCG            TTTTATTCTTTCACA 100 31
HC659_RS16170 3143245 .. 3143270 + -12.7  -5.63517   TAAATAATAAAAAAA         GGAGCTTGTGTC TGC GACACA-GCTCC         TTTTTTATTTGAAGA 100 34
        guaC 3144686 .. 3144718 + -18.6  -4.51699   TTAATCATAAAAAAA     CGCCAAGTC-AGCGG TTCT CCGCTTGACTTGGCG      TTTTCTGCTACTTCT 100 37
HC659_RS16215 3150602 .. 3150620 +   -11  -4.60797   AATGATAGAGAAGAA             CCGCTGAT CAA GTCAGCGG             TTTTCTGTATACCCA  95 39
HC659_RS16225 3151383 .. 3151409 + -12.3   -5.7946   TCTTTTAATAAAGCA         GCCAGGCGGAT ATTTG ATCAGCCTGGC         TTTTTTTATTAGAGA 100 33
HC659_RS16255 3158657 .. 3158677 + -12.5  -5.08169   CGGCATACAGAATAA            GGGCACCCT TTT AGGGCGCCC            TTTTTTCAAATGTAT 100 26
HC659_RS16275 3160952 .. 3160968 + -12.3  -4.22338   TAGGAATGACAAAAA              CGCCAGA TGA TCTGGCG              TTTTGGCATTATGCT  93 16
HC659_RS16285 3163085 .. 3163126 + -10.3  -6.12458   ATACCAAAAAAAGAA GTAACAAA-AAGCCGCCTCT TCA ACAGGCGGCTTATTTGCTGC TTTTTTCTTTTTTTG 100 22
        pucR NONE
        pucJ NONE
        pucK NONE
        pucL NONE
        uraH 3175648 .. 3175672 + -17.2  -3.55486   GGGGGAGTTAAGAAG          GAAGCCCGCC TCACC GGCGGGCTTC          TATTTGCTCTTCAAT 100 30
        yuzJ 3176247 .. 3176273 + -14.6  -3.93383   CCTCCCTGTCCGACA         GACGCCATAAGA AGT TTTTATGGCGTC         TTTGCTATGTGTTCA 100 74
HC659_RS16390 NONE
HC659_RS16395 3185636 .. 3185657 + -14.5  -4.91109   TGGCCGTAAGAAAAA           GGTGCTCCT TTTG AGGAGCACC            TTTTTCTAATACACA 100 32
        frlR 3187881 .. 3187891 +  -3.2  -3.17443   TATAAAAGAATCTCC                 CGCT CCA AGTG                 TATCTATTATATCAG  46 230
        sspG NONE
HC659_RS16450 3195142 .. 3195162 + -10.4  -5.20333   AAGAAGAGTAAAAAA           CCGC-GGCC CCTC GGCCAGCGG            TTTTTCTTCTGCATA 100 30
HC659_RS16560 3213569 .. 3213589 + -10.4  -3.99805   TGGAACAATCATAAT            GCAGCTGC TTCCC GCGGCTGC            TTTCACTTTTTCAAA  88 27
HC659_RS16570 NONE
HC659_RS16575 3215201 .. 3215229 +  -5.4  -5.95539   CAACATTAGTAAAAA       GGATACGATGTTC TTTA GGGCATC-TATCC        TTTTTTTGTTTAAAA  91 41
HC659_RS16580 NONE
HC659_RS16585 3217441 .. 3217464 +   -16   -5.4833   CCCATTAATAGAGCA          CCCCGCGGGT ATCA ATCCGCGGGG           TTTTTTATTCAATCA 100 33
HC659_RS16600 3219619 .. 3219644 +  -7.7  -4.77216   CTGAATCACAAAAAA         GCAGTCTGCTAT AAT GTA-CAGACTGC         TTTTTGGCTATTGTT  88 12
HC659_RS16625 3224331 .. 3224355 + -10.3  -3.55551   AGCTATTCAGCTGAT          CTAAATTATAA TTA TTATAATTTAG          TATTGATTTTTATTT  82 27
        mrgA 3224888 .. 3224910 +  -9.9  -5.84011   TAGGGTAACAAAAAA           GCTGAACCT TAATC GGGTTCAGC           TTTTTGTTTTTTCTT 100 33
        cssR NONE
        cssS 3228605 .. 3228629 +  -8.7  -5.71712   ATAGCAGTGCCAAAA          TAGACTGTAGA TGT TTTGCAGTCTA          TTTTTTTATGTGAAA 100 23
HC659_RS16655 3229845 .. 3229871 + -19.6  -4.33153   GCAACATATTTAGAA         GAACGGCTGCTT AAA AAGCAGCCGTTC         TTTCTTACTATTACG 100 28
       gerAA NONE
       gerAB NONE
       gerAC 3235563 .. 3235594 +    -5  -4.28049   GGCTCTCCCTTGCTT      GCGGCGCGGATGGC ATCG GCGATTTCTGCCGC       TTTTGAGGTTTTCAA  65 316
HC659_RS16740 3246494 .. 3246514 + -12.6  -5.96219   GTAGTATAAAAAAAA            CGCATCCG TGTTT CGGATGCG            TTTTTTTTATACGTC 100 37
HC659_RS16770 NONE
        oxdC 3252490 .. 3252521 + -15.2  -3.14564   AAATAAAAGACTTGC      GGCTTGCAGAGAGC ACTC GTTCTCCGCAAGCC       TTCATAAGGAGCTGA 100 35
        rsiO 3252957 .. 3252981 + -10.8   -5.1356   TCCCAGCTAAAAAAA          GAACGCATTC CAATT GGATGCGTTC          TTTTTATTCATAGCG 100 31
HC659_RS16815 3260276 .. 3260313 + -15.8  -3.85698   GAAAGCTTGACTAAA   TAAACAAAAGAGCCGC CTGCCC GCGGCTCTTTTGCTTA    TTTATAAGGAACGGC 100 23
HC659_RS16830 3263094 .. 3263105 +  -4.4  -4.11692   TTTTATATGCTGTTT                CATG GGCG CATG                 TTTTAAACGTGAGTG  61 8
HC659_RS16835 3265070 .. 3265087 +  -9.9  -5.22039   TTCCGAATAAAAAAA             TCCCTCT ATCA AGAGGGA              TTTTTTACGTTTCCA 100 31
        modA NONE
        modB 3267580 .. 3267596 +  -9.4  -5.26875   AACGCACTAAAAAAA              CTCCCC ATAAC GGGGAG              TTTTTTGATTAAAAC 100 31
        yvgO 3269154 .. 3269173 + -10.7  -5.19261   CTTAATATAAAAAAA            GCTGGCG CTCTAA CGCCAGC             TTTTTTGCTGCATTT 100 36
HC659_RS16885 3278582 .. 3278618 + -20.5   -4.3014   CCCGGCAGGCTACCA    TAAAAGAAACCTCTCCG TCA TGGAGAGGTTTCTTTTA    TTTTACTGACTATCT 100 90
        iolW 3287188 .. 3287209 +   -13  -4.87291   AGCAATAAAACAAAA           GCCTCCCC AAATAA GGGGAGGC            TTTTTCATTAGAATG 100 33
HC659_RS16985 3298027 .. 3298043 +  -3.5  -5.59655   CATAGGAATAGAAAA              CGCTTGG CTT CCTTGCG              TTTTTTGTTACTTTA  79 36
        rghR NONE
HC659_RS17000 NONE
        catR 3299725 .. 3299756 +  -3.7  -5.79595   GACTAATTGCTAAAA      TGGTTCTGATCTC AAAGAC GAGAAAAGAACCG       TTTTTTATTTTCCAG  90 35
HC659_RS17010 3301551 .. 3301569 + -14.6   -5.1764   TTTAAAGAGAAAAAA             GAGGCTGG ACT CCAGCCTC             TTTTTCTATTCTATG 100 36
HC659_RS17035 3305845 .. 3305868 +  -7.6  -5.09225   CCGAAGCCGTAAAAA          GTTCCCA-AAT TCA ATTCTGGGAAC          TTTTTTAAGTCCAAT  93 29
        sdpA NONE
        sdpB NONE
        sdpC 3308176 .. 3308203 + -18.6  -4.59773   ATCCATTATAATTGA        GTGTCTTGCGGA TTGC TCCGCAAGACAC         TTTTTCAACGTGAAC 100 40
        opcR 3313581 .. 3313606 + -13.4  -4.68593   CGAAAACAAAAGAAT         GCAGCTCTCT AAAATA AGAGAGCTGC          TTTTTGCATCATGAA 100 9
HC659_RS17095 3314989 .. 3315001 +  -3.5  -3.15699   AGGATTTTGGGGATG                TATTT GAG AAATA                TATTAATAACTAGAT  47 0
HC659_RS17100 3315843 .. 3315882 +   -21  -3.06831   GTTATATGCTCTTTT  AAAAACAACCCCATCACC TGCT GGTGATGGGGTTGTTTTA   TTGAATAGACGTTAA 100 24
HC659_RS17110 3318298 .. 3318320 + -10.5  -4.21997   GAAAGCATAAAAAAG           CCGCCGAGA GAAAA TCCCGGCGG           TCTTTTTATTACTTG  90 39
        araR 3328538 .. 3328566 +    -9  -5.65177   GAATGAATAAAAAAA       GCAATGTA-TGGG TCTC CCCGCTACATTGC        TTTTTTTATAGCTGT 100 31
HC659_RS17165 3331650 .. 3331675 + -19.1  -4.60258   GCACAATAATAAAAA         CCCTCTTGCCG GATG CGGCAAGAGGG          TTTCTTATTTACTGA 100 32
        rsbQ 3342144 .. 3342155 +  -5.8  -3.05384   GGAACGAAAGGGATA                GAGG TGAC CCTC                 TTAGATGGACAAACA  56 45
        rsbP 3343377 .. 3343414 + -11.5  -5.95539   TGTAAAATAAAATGA   TCCATGAGACATAACAA TGAT TTGTTACATCTCATGGA    TTTTTTTGTTTCAGC 100 31
HC659_RS17260 3354260 .. 3354278 + -10.3  -5.05113   GATTCCTTAAAAAAA             TCCTCCC GTCTA GGGAGGA             TTTTATTTATATCGC 100 31
        yvfG 3355890 .. 3355916 + -11.7  -4.62203   GAGAATCAAAATAAA        CCTTCC-GCTCA CATG TGAGCAGGAAGG         TTTTCCTTCTTTGAG  95 27
        slrR NONE
        pnbA NONE
HC659_RS17360 3374063 .. 3374094 + -20.4  -5.28414   TCAGCAAAAAGAAAA      CCCGGAAAAGAGAA GTAA TTCTCTTTTCCGGG       TTTTTATGTTTATTA 100 8
        sacB 3379221 .. 3379259 + -14.2  -4.31433   TAACAAATAAAAACG   CAAAAGAAAATGCCGATA TCC TATTGGCATTTTCTTTTA   TTTCTTATCAACATA 100 31
        levB 3380843 .. 3380865 +  -9.9   -5.7946   ATTCATGAATAAAAA          CAGGGGCAGC GCAG GCTGCCC-TG           TTTTTTTATTAGGAG 100 29
HC659_RS17395 3382506 .. 3382536 +   -15  -3.90744   ATTGATTATGATAAA       TAAAGAAGCAAGAG GTT TTCTTGCTTCTTTA       TTCTTTACAAACAAA 100 23
HC659_RS17400 NONE
HC659_RS17405 NONE
HC659_RS17410 3384118 .. 3384143 + -11.9  -4.46212   ATTGCCCCATCATTT         TGCTGCATGTC ACAA GACCTGCAGCA          TTTTGTGCTGCCGCG 100 219
        cotR 3387780 .. 3387790 +  -2.6  -3.53031   CGTCAGCACAACTAA                 TTAT ACG ATAA                 TTCCTTTCAAATAAC  48 420
        clpP 3388615 .. 3388640 + -13.4  -5.37593   AAAGTAATAACACAA         CCTGCAAGAG CTGCGT CTCTTGCAGG          TTTTTTCATTTAAAC 100 34
HC659_RS17490 3401729 .. 3401745 + -11.5  -5.45726   AACATGCATAAAAAA              GCGGCCG CGA TGGCCGC              TTTTTTTAACCTGTG 100 30
HC659_RS17505 3405324 .. 3405345 + -14.5  -3.93782   TCAATAAATCAAAAA           TCCGGTCTG ATAA CAGACCGGA            TTTCATATTACATAC 100 34
HC659_RS17530 3410270 .. 3410290 + -11.2  -4.19238   TGTTCATAAGAAAAA            GCTTGCAG ATAAC CTGCAAGC            TTTTCACGTTACAAA  90 32
HC659_RS17640 3432233 .. 3432243 +  -3.2  -4.98255   AATTGTCTTTACTTT                 CAGG CTG TCTG                 TTTTTATGATTAAAG  70 142
HC659_RS17645 3433030 .. 3433053 + -12.5   -4.7889   ATTTTAACAAAAAAA          GTCCGCTGA TGTTAT TCAGCGGAC           TTTTTCAATCTTTCT 100 34
        nagA NONE
        nagB NONE
        nagR 3439748 .. 3439760 +  -3.4  -2.87501   ACCGTTATACATTTG                TCCA CTATA TGGA                TCGTCTTTCATAAAA  44 0
HC659_RS17695 3444306 .. 3444327 + -10.1  -2.82407   ATATATGTAAAAAGA           GTCTCACCC GCAT GGGAGAGAC            CTTTGGAATTCTATT  75 31
        pchR NONE
HC659_RS17715 3448492 .. 3448509 +  -9.1  -6.32976   ACCACATGTAAAAAA             GCTGCCT TTGC GGGCAGC              TTTTTTTATTTTTTT 100 30
HC659_RS17740 3451043 .. 3451061 +  -5.4  -2.75891   CAATATCTTGCCTTT             TTTGTTTT GAA AAAACAAG             TGATTCCCTGGCTGT  52 94
HC659_RS17765 3460059 .. 3460098 +  -6.4  -3.16564   CGTCCCCCTCTTTCT  TATACAAGCGGGGCGGGT GTAT ACTTGTCCTGCCAGTATA   TTCGTGAGGTGAAAC  61 43
HC659_RS17770 NONE
HC659_RS17775 3462057 .. 3462096 + -15.7  -4.46212   CTCAGCGTAACACAA  AACAGCCCGGCATCGCA TCATCC TGCGGTGCCGGGCTGCC   TTTTATGATCCCGAA 100 31
HC659_RS17930 NONE
        tagV 3490337 .. 3490363 + -15.2  -4.56597   CATCCTATTAAAAAA         TGCCCGGTCCTT TTA GAGGATCGGGCA         TTTTTGCGCAGAAAA 100 30
        lytR 3505987 .. 3506013 + -13.8  -5.65927   AAAGTAAAACAAAAA         GAAGCTTCGCAC AAT GTGCAAAGCTTC         TTTTTTATTTGCCTG 100 34
        galU 3508292 .. 3508317 +   -12  -5.95539   AAATCTAAACATAAA         GGCTATTGGA CATTCA TCCAATAGCC          TTTTTTTATTTCAAC 100 33
HC659_RS18015 3508828 .. 3508848 +  -2.6   -2.6732   ACCTGCCATAATACA            CCAAAATA ATTGA TTTTTTGG            ATCTTTCGGTTAAAG  41 17
HC659_RS18045 3515310 .. 3515335 +   -12  -5.95539   AAATCTAAACAAAAA         GGCTATTGGA CATTCA TCCAATAGCC          TTTTTTTATTTCAAC 100 33
        tagA NONE
        tagB 3525113 .. 3525141 +  -6.9  -5.48063   AATAAGCTAAATGAT       GA-CACTTGTTC AAAACA GAACAAGTGTTC        TTTTTTCTATTGGAT 100 31
HC659_RS18085 3526564 .. 3526594 +   -20  -3.65426   GGTGTGATAATCAAA       TAGGCTGTAGCTAT TTA ATAGCTACAGCCTA       TTTGCAACTTTCTAA 100 34
       gerBA NONE
       gerBB NONE
       gerBC 3534296 .. 3534317 + -15.9  -5.47159   AGTAAGCAATCAAAA           GGGTGCGCA TGAT TGCGCACCC            TTTTTTATGTTCCGA 100 36
        tagT 3537001 .. 3537024 + -18.2  -4.32903   TAGGTGTATAATGAA          CGGGATGGCG ATTA CGCCATCCCG           TTTTACATATTTCCT 100 30
HC659_RS18125 3538019 .. 3538037 +  -9.6  -5.62288   TATGCATAAAGAAAA             GACTCCAG AGA TTGGAGTC             TTTTTCTTTTATTGC 100 32
HC659_RS18155 NONE
        rbsK NONE
        rbsD NONE
        rbsA NONE
        rbsC NONE
        rbsB NONE
HC659_RS18185 3549472 .. 3549507 + -17.8  -3.46205   ACATGACAAAATAAC    TGAGAGGGATTCCGCA TAAA TGCGGAATCCCTTTTA     TTATGAATTGATTTG 100 27
HC659_RS18190 3549928 .. 3549959 + -11.7  -4.07568   GGATTTTTAAACAAA      TACAGCCCTG-CCG TATGT TGGACAGGGCTGTA      TTTTAAACAAAAGGC  91 31
        alsR 3554184 .. 3554208 +  -2.2  -2.86023   AACTAAAGAGAGTGA          TGCAGGTA CATGAACAA TACTTGCA          ATCTCTTTTTTCTTT  41 13
HC659_RS18215 3555755 .. 3555780 +  -6.9  -4.54047   GTATGAAACGAAAAA         CTGCCTTCT GCTTTTCA AGAGGGCAG          TTTTGTATACACTAG  81 45
        cotG 3559639 .. 3559667 +    -6  -5.95539   TTTTCATTGTTTCAA       TAGGCTGCCG-GC GGAG GTACGGAAGCCTA        TTTTTTTATTTGCCC  93 47
HC659_RS18240 3560501 .. 3560528 + -14.2  -4.39002   AAAATATCAAAAAAA        GAACACCCAGAG TAAG CTCGGGGTGTTC         TTTTATGAAACGTTT 100 118
HC659_RS18245 3561226 .. 3561242 +  -5.8  -3.50393   GCCGTCTGAGTCTGC             GGCTGGC CTTC GCC-GCC              TTGTGTGCCGTACAG  57 331
        chrS NONE
        chrB NONE
        chrA 3564339 .. 3564354 +    -9  -5.79595   CATTTATAGAAAAAA              GCACCT GGAC AGGTGC               TTTTTTATTTTGGCC 100 32
HC659_RS18280 3566430 .. 3566445 +    -9  -2.79823   CCGTCAATGAGAATA              TCGGTG TATG CACCGA               CTTCATTTTCAGGCA  66 329
HC659_RS18345 NONE
HC659_RS18350 3580110 .. 3580130 + -15.5  -5.17576   ATCATGACTAAAAAA            GCTGGCTCT AAA AGAGCCAGC            TTTTTTCCGTTCATA 100 40
HC659_RS18375 3583553 .. 3583587 + -18.8  -3.32769   AGATATGTTCTGCAT     GAAAAAAGCTGCCGTT TTG AACGGCAGCTTTTCTC     TTCGTGCTTTCACCC 100 107
HC659_RS18390 3585121 .. 3585141 +  -9.7   -5.4505   ATTGAGATAAAAAAA            GACGCCGTT TCT AACGGCATC            TTTTTTATTCCGGCG 100 47
        rapD 3587697 .. 3587707 +  -2.4  -3.59979   CGTTCTCATCAAGTA                 CGGG ATA CCCA                 TTTCCAGTGACGAGC  49 428
HC659_RS18435 NONE
HC659_RS18440 3592565 .. 3592588 + -18.2   -5.1287   CAGAATAACTTGTCA          GACTGCCGGG AAAT CCCGGCAGTC           TTTTTTACATATAAA 100 33
HC659_RS18470 NONE
HC659_RS18475 3600255 .. 3600277 + -12.8  -5.60993   CTTTAATATTGGTAC           GAGATTCGGA CAC TCCGGATCTC           TTTTTTTGTGCACAG 100 35
HC659_RS18480 3601020 .. 3601047 +  -9.2  -4.05181   CTAAGAAAGACAAAA        GCCGGC-GTCT GAAATCA AGACAGCCGGC        TTTAATATTTCTCAT  85 37
HC659_RS18495 NONE
HC659_RS18500 3603597 .. 3603627 +  -9.1  -4.07285   GATGAGACAGGACAG      GGCATGAGTTCCAT ATAA ACGGAAC-CATGCC       TATTTTATTTGACTA  81 42
HC659_RS18505 3604000 .. 3604024 +  -2.2  -5.25805   TCGCTCTTTTTGATC         CTGTTCAGCAT ATAG ATG-TGAACCG          TTTTTTGGATTTGTT  74 155
         cls 3606004 .. 3606024 + -15.4  -3.18738   ATAAGATGCGAAAAC            CCCCGGCC TTTAC GGCCGGGG            ATTTTCCTGATGGTC 100 37
HC659_RS18525 3607322 .. 3607339 + -12.7  -5.64873   TATTAATGAGAAAAA             CCCGGAG CTGG CTCCGGG              TTTTTTATTATTCCG 100 35
HC659_RS18630 3622921 .. 3622941 +  -9.8  -5.72254   TCGTTCATAAAAAAA            TCCTTCTC ATAAA GAGAAGGA            TTTTTTCTTATTTCC 100 31
HC659_RS18725 3637724 .. 3637742 + -13.2   -5.4505   TTTACTGCAAAAAAA             GGAAGCCT AAG AGGCTTCC             TTTTTTATTAAAACA 100 16
HC659_RS18745 NONE
        racA 3641232 .. 3641248 +  -9.4   -5.7946   AACCTAAAGCAAAAA              GCTCCC GTAAA GGGAGC              TTTTTTTGTTACGCA 100 34
HC659_RS18810 3652536 .. 3652565 +  -5.8  -5.57396   GAAACAAATAAAAAA       GACTTGCCCGCTT TTGAC AAAC-GGCAAGTC       TTTTTTATTACTTCT  91 70
         cls NONE
        uvsE NONE
HC659_RS18845 3661074 .. 3661093 + -10.8   -5.2291   CTTACATACAAAAAA            GGATAGAC ATCT GTCTATCC             TTTTTCTTATGCTCT 100 41
HC659_RS18895 3673372 .. 3673391 + -10.8  -5.47821   CACAAGGTAAAAAAA            CAAGGACA CCGC TGTCCTTG             TTTTTTTCAGTCAAT 100 31
HC659_RS18920 NONE
        sboX NONE
        albA NONE
        albB NONE
HC659_RS18940 NONE
        albD NONE
HC659_RS18950 NONE
HC659_RS18955 NONE
        albG 3684925 .. 3684938 +  -3.1  -2.83905   CGCGCCAACCGGAAT               CA-CCG TCA CGGCTG               TATAATCACTTGTGC  44 70
        rapF NONE
        phrF 3689135 .. 3689151 + -10.8    -5.626   CGAGGAATGATTTAA              CCGCCG TCCAT CGGCGG              TTTTTTTGTCCCCTC 100 26
HC659_RS19005 3693774 .. 3693800 +   -13  -3.33762   CGACATCATTGAAAA         TAACCCGGCTCC TCG GAGGCCGGGTTA         TTCGTATGGTTCCTT  93 29
HC659_RS19020 3695562 .. 3695582 +  -9.6  -4.79955   AATAATCTCTATAAA            GCCGGCGC TTCGC GCACCGGC            TTTTATTATCCCTAT 100 36
        rsfA 3704101 .. 3704126 + -12.7  -4.13014   AATGACATAGAAAAA         TCCCAAAACGG GCAG CTGTTTTGGGA          TTTTCGGCATGTGCA  95 36
HC659_RS19085 3709244 .. 3709265 +   -13  -4.78752   TATGTATAATATCCC           CTCCCGCC CTATCC GGCGGGAG            TTTTTCAATTCTCCT 100 32
        bacG 3710153 .. 3710174 + -14.5  -4.35483   AAAAGCATATAAAAA           CATCCCGCT TTTT AGCGGGATG            TTTCTTGTAATGACC 100 29
        gerQ 3735871 .. 3735898 + -12.2  -5.32944   CAAGATAAGAAAAAA        GCCAATCACTCAT ATG ATGAG-GATTGGC        TTTTTTGATTATAGA 100 33
HC659_RS19230 3739542 .. 3739558 + -12.3  -4.60889   TACTCAAATAAAAAA              GCGCAGA GTA TCTGCGC              TTTTTACAAATCCTT 100 30
HC659_RS19245 3742072 .. 3742096 + -13.6  -4.65895   CAATCATAAAAAAAG          GGGCTGCCTT ACAGA GAGGCAGCCC          TTTTTAAATCACCGA 100 32
HC659_RS19265 3746858 .. 3746876 +  -8.8  -3.00046   CTCTTTTACATGTCC             GATCGCCC ACA GGCCGATC             TCATATTCTTTTTTA  66 493
         vpr 3750558 .. 3750578 + -18.3  -4.60041   GTTGAATAAGAAAAA            GCCCTGCCG AAT CGGCAGGGC            TTTTTAAAGATCAGT 100 32
        ywcE 3754572 .. 3754591 + -12.2  -5.55695   GAAGACAGCAAAAAA            CCCTCTTC CAAT GAAGAGGG             TTTTTTGTATTATTC 100 39
HC659_RS19325 3759318 .. 3759343 + -15.5  -4.67048   GGATAAAAGCAGCAG         CACCCGAAGCG TCAG CGCTTTGGGTG          TTTGTTTTGCCATAA 100 35
        slrA 3763900 .. 3763914 +  -8.6  -3.03243   CTACGACAGACAGCC               GGTGAT GCG ATCACC               TCTTGGCACATGCAT  70 162
HC659_RS19355 3764506 .. 3764523 +  -4.1  -4.02946   GATCTGAAGGGTGAA             CAGACAT GAAT ATGACTG              CTTTTTTATTATTTT  58 17
HC659_RS19360 3766058 .. 3766075 +  -9.9  -4.97312   ACAGGAATAAAAAAA             GCTCTCT TTAT AGAGAGC              TTTTTCCTTACTTTT 100 31
HC659_RS19400 NONE
HC659_RS19405 3774351 .. 3774368 +  -7.7   -6.0427   CATTTATGTAAAAAA             CTGTCCT CTCG AGGGCAG              TTTTTTTTATGTGCT 100 30
HC659_RS19410 NONE
HC659_RS19415 3775889 .. 3775909 +  -9.7  -5.10004   TTCTACATAAAAAAA            GCTGCCC CTGAACA GGGCAGC            TTTTTCATTATTTTT 100 31
        glxA 3778088 .. 3778102 +  -8.6  -3.11955   GAAGAGCTTGCCCCT               CATCTG AGC CAGATG               TTACATCATCATTAT  66 508
        sacX NONE
HC659_RS19455 3786505 .. 3786527 + -10.7  -5.77988   GAGACAAACAAAAAA           CGCTTTTGA TCATC TCAAAAGCG           TTTTTTTATATCTGT 100 39
        ywaE 3789087 .. 3789114 +  -9.9  -5.59879   GGTACCGCGTGCATT        GAGCCACGTCCC TTATC GGGATG-GGCTC        TTTTTTGTGTTTGTA 100 219
HC659_RS19475 3790401 .. 3790426 +  -7.7  -5.42862   TTTGATATTCCGAAA         CGCTTATGA CCCTTCAT TCATAAGCG          TTTTTTTGCAGGTAT 100 41
        ywaD 3791914 .. 3791933 + -13.6   -5.9873   TATCAAATAAAAAAA            GACGGCAC TTGG GTGCCGTC             TTTTTTTTATAATGA 100 31
HC659_RS19515 NONE
        dltA NONE
        dltB NONE
        dltC NONE
        dltD NONE
HC659_RS19540 3801863 .. 3801885 + -12.1  -5.22312   CGAGCATATGAACAC           GCAGGAGAA TTAAT TTCTCCTGC           TTTTTTCATATGAAT 100 13
HC659_RS19545 3803115 .. 3803135 + -11.1  -5.47399   GCAAATAAGAAAAAA            GCCGGCC CATTACA GGCCGGC            TTTTTTTACGCTTCA 100 33
HC659_RS19585 3811276 .. 3811297 + -10.9  -6.23317   ATTAACAAAAGCGAA           CAGGGCTTT TTTT GAAGCCCTG            TTTTTTTATTTTTCT 100 36
HC659_RS19590 NONE
HC659_RS19625 3817042 .. 3817064 + -12.1  -5.37345   GGGGTATCAAGAAAA           GCTGTCTTC TCTCT GAAGACAGC           TTTTTTATCATTCAA 100 10
        cimH 3825739 .. 3825768 + -10.9   -5.1287   TATTGATCCCCGCAA       GCAAGTTC-TTCGT CAA ACGAAAGAGCTTGC       TTTTTTGCATGTCCA 100 35
HC659_RS19660 NONE
HC659_RS19665 3827786 .. 3827805 + -12.1  -6.01187   TGTGGCGGCGGAGGG            GGCGGCG ATTAAA CGCCGCC             TTTTTTTATTTCATT 100 14
HC659_RS19695 3834497 .. 3834516 + -13.6  -4.08557   AATAACAGCTAAAAA            GGGTGCCT GTTC AGGCACCC             TTGTTCTTTAAAGGC 100 36
HC659_RS19705 NONE
        yxjM NONE
        yxjL NONE
        pepT 3839451 .. 3839472 +  -5.8  -5.36441   GCATAGTGCCAAAAA           ACCAGTCC AAAAAA GGACTGGC            TTTTTTGTGTGAAAA  89 35
HC659_RS19725 3840249 .. 3840268 +  -8.6  -4.26634   TATTTCAAACGAAAA            GGCTGC-TG AAT CACGCAGCC            TTTTAAAATTGTTTT  83 46
HC659_RS19730 3841036 .. 3841060 +   -13  -4.68593   GATTTGATCGTTCAA          GCTCTTCCTT ACACA AAGGAAGAGC          TTTTTACATGCTCAA 100 216
HC659_RS19735 3842425 .. 3842449 +   -13  -5.22039   GAGATTGTCACGCAA          GCTCTTCCTT ATCCA AAGGAAGAGC          TTTTTTACATTTGAA 100 217
HC659_RS19740 3843636 .. 3843665 +    -8  -5.42131   AAGCAAAGAAAAAAA       CACACTTGATTCC CTAGC GGAG-CAAGTGTG       TTTTTTATGTCATTG  95 39
HC659_RS19770 3850092 .. 3850119 + -14.3   -4.5774   TGTGGTAGAAACATT        GAGCCATATCC CTTTTC GGATATGGCTC         TTTTCATTATTGATA 100 33
        citN 3854941 .. 3854965 + -11.5  -3.76815   TCATTACAATCATAA          GAGCCTGCT ATATTGC AGCAGGCTC          TTTCACATTTTGCAT  91 142
HC659_RS19810 3859091 .. 3859120 + -10.1  -3.37654   CAGCCAGCAGCAAAA       TGACCTGC-CCC TTTAACT GGGAGCAGGTCA       TTCATCATTTATTCG  78 10
        hutP 3887031 .. 3887069 + -13.4  -4.96848   GATCTTAGACGATAG  GGGGCTATGC-GTGAAA TCAAAT TTTCACAGCATAGCTCC   TTTTTGTATGGGCGC 100 52
        hutH NONE
        hutU NONE
        hutI NONE
HC659_RS19980 NONE
HC659_RS19985 3894036 .. 3894070 +  -7.2  -5.11063   ACATCCTGTAATCAA     AAAAGCACACCCCA CTCAGGA TGGGATGTGCTTTA     TTTTTATTCAGTAAT  90 30
       cotNE 3911223 .. 3911238 +  -2.6  -4.78077   GGAAAATAATTGTAG              TTCC-TC TTT GACGGAA              TTTCTTTTCATTCAA  65 192
HC659_RS20080 3911668 .. 3911692 + -10.1  -5.85737   AGTAACATATAAAAA          GCTCAACAC AATGCGA GTGTTGAGC          TTTTTTTCTTACTGT 100 36
HC659_RS20090 3913248 .. 3913271 + -10.3  -5.37345   TAAAAAATAAAAAAA          CGGCACAGT CATGAC GCTGTGCCG           TTTTTTATGATTCAC 100 31
        iolR NONE
HC659_RS20175 3931643 .. 3931667 + -18.7    -5.626   CGCATAAGAAGAAAA          CAGCCTTCTCC ATT GGAGAAGGCTG          TTTTTTTGTGCGATA 100 34
HC659_RS20180 NONE
HC659_RS20185 3932876 .. 3932896 +  -7.6   -5.5943   ATGTCTTAATCAAAA            CCTTACTC CGCGC GGGTAAGG            TTTTTTTAATGGTTT 100 43
HC659_RS20190 3934487 .. 3934513 + -15.3  -5.19879   TACATTATAAAAAAA         GGAATCGTCTC CTTAT GAGACGATTCC         TTTTTCTGTTTACAC 100 31
HC659_RS20205 3937761 .. 3937779 +   -11  -5.19879   AAAGAAACGAAATAA             GAGAGGGG ATA TCCCTCTC             TTTTTGTCTTTCAAA 100 26
HC659_RS20215 3940425 .. 3940448 +  -7.5  -5.90231   TAATCGTAATGAAGA          GAATCTGCA TCATCT TGCAGGTTC           TTTTTTTATCTTTAT 100 38
HC659_RS20235 3943584 .. 3943619 +   -12  -4.88918   TGTATAAATAATAGA    AAAAAGTCTAGACGCC AATA GGCATCTAGACTTTTG     TTTTCTTTACAATAG 100 30
HC659_RS20255 3947830 .. 3947855 +  -3.4  -4.66953   ACCATGATAGAAAAA        CCCATGCTGTTC CAGC GAAC--CATGGG         TTTTTCAGCTGTTAA  64 47
HC659_RS20265 NONE
HC659_RS20270 3949600 .. 3949622 + -10.6  -5.04601   TATTTAACAAAGAAA           GACTGCCC CGGGGGA GGGCAGTC           TTTTTCGTTTATGAA 100 34
        gntR NONE
        gntK 3954384 .. 3954397 +  -6.7  -2.54687   TGACATGAAGGGGAG               GGCAT TACC ATGCC                GTTAATCATCGTTGC  57 45
        gntP NONE
         gnd 3957182 .. 3957206 +  -9.4   -5.9218   AACCTGTATCAAAAA         CACGG-TCAGT TTCA ACTGAACCGTG          TTTTTTTCTTCTATC 100 39
        ahpC NONE
        ahpF 3959748 .. 3959780 + -15.7  -5.69262   TAACTGATAAAAAAA      TCCGCTATATTGCCA GAT TGGCAGGATAGCGGA      TTTTTCTTTTTCTAC 100 34
HC659_RS20325 3962626 .. 3962646 + -12.7  -3.69809   TTATGTTCAAAAAAA            GCTACTTCA CAG TGAAGTAGC            TTCCTTTATTAAATG  95 87
HC659_RS20340 3966442 .. 3966467 +  -8.3  -5.79588   GAAGTGAGGTATACG         GGGTTCAGAGA TTAT TCTCTGGGCTC          TTTTTTTGGTTTTCC 100 34
HC659_RS20360 3973200 .. 3973223 + -13.2  -5.54338   ATTACCAGCAATAAA          GCCGG-CGTTC TGA GAACGTCCGGC          TTTTTCTTTTACTTC 100 27
        rapG NONE
HC659_RS20400 3978917 .. 3978934 + -14.1  -3.27525   TGGATAAATGAAAAA             CCCCCGC GGGT GCGGGGG              TTCAATTTAACGAAA 100 34
        rocR 3984644 .. 3984654 +  -5.4   -3.9941   GACCCATTGTGGCTG                 TCGA TAA TCGA                 TTTCGTTATGGCAAG  63 104
HC659_RS20435 3987912 .. 3987942 +    -9  -4.82901   TCTAAATACTCTTTT       AAACTGAACGTGTG TGA CCCGCGTTCAGTTC       TTTTTCTAAGGAGGA 100 133
HC659_RS20440 3988538 .. 3988562 + -10.7  -5.83822   ATATATCCTTTTCAA          CTGAACGGGCG TGA CCCCTGTTCAG          TTTTTTTTGCATATC 100 98
HC659_RS20515 4000263 .. 4000280 +  -9.1  -5.06103   TTTAATGAATGAAAG             CCTTCGC TGCA GCGAGGG              TTTTTTAGCGGTTAT 100 36
HC659_RS20525 NONE
HC659_RS20530 4002049 .. 4002067 +  -8.1  -5.65927   AATTCAGCATAAAAA             GCGGGGA AAATA TCTCCGC             TTTTTTCTTTGAATA 100 29
HC659_RS20535 4004210 .. 4004243 + -15.5   -3.1315   TATCTCGTGGAATAA     AAAAAGAGGCTTGGA TGAA TCCAAGCCTCTTTTC      TATTAAGCTTCTTCT 100 26
        cotF 4008645 .. 4008669 + -14.4  -3.58864   AATGAAATAAAACAA          GCAGCAAAGG AGTTC CCTTTGCTGC          TATTTCTGCTGATCC 100 31
HC659_RS20570 4010169 .. 4010226 + -18.1  -3.50047   TGTCTTAACAGACGC AATGGCTGAATAAGCAAAAAGCATCCCG CGT CGGGATGCTTTTT-CTTATTCACCCAGC TTCTCAATTTGTCCC 100 13
HC659_RS20580 4012415 .. 4012434 + -13.6  -2.66272   AGAACATGAAAAAGA            GAGCTGCC AGTT GGCAGCTC             TCCCTTTACATCAAA  93 39
HC659_RS20595 4014655 .. 4014679 +  -8.8  -5.50774   CGAAAAAATTTAGAA          TGATAATCTT TTTAT AAGATTATCA          TTTTTATTTATTCTA 100 80
HC659_RS20600 NONE
HC659_RS20605 NONE
HC659_RS20610 NONE
HC659_RS20615 4017905 .. 4017926 +  -8.8  -4.87665   TTAAACTGGAATAAA           GAGTGCTT GCTGAA AAGCACTC            TTTTTCTGCATCGAA 100 356
HC659_RS20635 4020184 .. 4020200 +  -5.1   -5.1861   ATTGGAAATAAAAAA              GGACC CGCTAAC GGTCC              TTTTTTACTGATCAA  79 30
HC659_RS20645 NONE
HC659_RS20650 4022979 .. 4022989 +    -4  -3.30443   TGTCACTTATGAGCA                 TGAA CAG TTCA                 TTGGTATACTAATCA  50 55
HC659_RS20655 4023589 .. 4023604 +  -4.6  -5.93252   CCGCAAAAGCCTCCG              CGGCAG GCAG CTGCCA               TTTTTTCTTTTTGAG  91 103
HC659_RS20675 NONE
HC659_RS20680 4026118 .. 4026139 +  -9.5  -3.53012   TCTTATCAAAAAAAA           GAAGGGGTT AAAA AACCTCTTC            TTTGAAAAAACGAAA  78 15
HC659_RS20690 NONE
HC659_RS20695 4028279 .. 4028299 +  -9.7   -3.2819   CTTATTGAACTAAAG            GGGGAATCC AAT GGGTTCTCC            TTAATACTATTGAAT  77 96
HC659_RS20715 4030680 .. 4030699 +  -4.9   -4.8269   TAGAATAACCAAAAA            GGCAACC AGTTTC GGCTGCC             TTTTTAATAGTTATA  74 38
HC659_RS20725 4032497 .. 4032525 +    -6  -6.01187   CATTCATTTTTAAAA       CCTGCAATCCGTA ACCA TGCGG-TAGCAGG        TTTTTTTATTTGCTT 100 198
HC659_RS20730 NONE
HC659_RS20735 4034189 .. 4034216 +  -8.6  -3.75419   ATAAAATCAAAAAAA        TCCATCTTGATT AACA AATCAAAATGGA         TTATATGTTAATTTT  78 290
HC659_RS20750 NONE
HC659_RS20755 4037289 .. 4037322 +  -8.9  -5.10877   GCGATCCACACATTA     ATAAGCAGCAGGGAT TAAG ACCCTTGCTGCTTAC      TTTTTGATTTCTTAT 100 8
HC659_RS20765 4039789 .. 4039811 + -13.5  -2.92246   ACAGATTTAAAAAAG           TCAGTGCGG ATCTG CCGCACTGA           TCTCATTACAATTGC  90 31
        yyaC 4049545 .. 4049565 +  -8.4  -4.39696   CATATAAAACAAAAA            CCATCTTT GCTTG AAAGATGG            TTTCTTCATTTACGA  86 34
HC659_RS20840 4051891 .. 4051913 + -13.5  -4.01088   TTGAAAATATAAAAA           GCTCTCCTG CTTTT CAGGAGAGC           TTCTATTTTGGTATG 100 51
        rpmH 4059251 .. 4059274 -  -8.9  -5.11033   CATAACGTGAAAAAA          GACCACTGA CATTAT TCAGTGGCC           TAAGCTGATAATACT 100 25
        rnpA 4058668 .. 4058679 -    -3  -2.75844   TCTTTTATTGCAAAG                CATA CTTG TATG                 TATTTTAGCATCTTT  42 118
        yidC NONE
HC659_RS20865 4057184 .. 4057211 - -11.4  -5.71712   TCGGATACAAAAAAA        CCGAAATCCAAT TTTT ATCGGACTTCGG         TTTTATGCTATCTTT 100 33
        mnmE NONE
        mnmG NONE
        rsmG NONE
         noc 4051891 .. 4051913 - -13.5  -5.28983   TTGAAAATATAAAAA           GCTCTCCTG CTTTT CAGGAGAGC           TTCTATTTTGGTATG 100 28
         soj NONE
       spo0J 4049545 .. 4049565 -  -8.4  -5.58522   CATATAAAACAAAAA            CCATCTTT GCTTG AAAGATGG            TTTCTTCATTTACGA 100 35
HC659_RS20820 NONE
HC659_RS20815 NONE
HC659_RS20810 4045064 .. 4045096 -  -4.9  -4.13945   AGGTTCACTGGAAAA      GACAAGCTGACAA AAAAGCA TTTTCAGCCTGCC      AATCCCTTTGATTAT  63 37
        ychF 4043821 .. 4043831 -  -2.6  -3.27476   ATGGGCAAGGAGCAA                 TAAT TCT ATTA                 CTCACAATTTTATAT  45 75
HC659_RS20800 NONE
         ssb 4042931 .. 4042945 -  -4.2  -2.69433   TAATCACATTAGAAT               GGAAGA TCA TCATCC               GAGATGTCAATCGGT  47 4
        rpsR 4042602 .. 4042627 - -16.3  -5.24129   TCCCCCTATAAAAAA         GAGCAAGAACC CGAA GGTTCTTGCTC          TTTACGCATCAGCTT 100 39
         xth 4041787 .. 4041811 -  -5.8  -5.71712   TTTCATATAAAAAAA          GCAGTAAG TGTAAAATC CTTACTGC          TATCTCATCATATAT  91 33
        ccpB 4040809 .. 4040822 -  -3.9  -2.61602   TGAAGTTATAAGGTA               TGAAA TGCA TTTCA                GTTCAAGCTTTTTTC  45 28
HC659_RS20775 NONE
HC659_RS20770 4039788 .. 4039812 -   -10  -5.15381   AACAGATTTAAAAAA          GTCAGTGCGG ATCTG CCGCACTGAT          CTCATTACAATTGCT 100 30
HC659_RS20760 4037290 .. 4037321 - -12.4  -3.32993   CGATCCACACATTAA      TAAGCAGCAGGGAT TAAG ACCCTTGCTGCTTA       CTTTTTGATTTCTTA  89 7
HC659_RS20745 4034189 .. 4034216 - -10.8  -5.81622   ATAAAATCAAAAAAA        TCCATCTTGATT AACA AATCAAAATGGA         TTATATGTTAATTTT 100 33
HC659_RS20720 4030680 .. 4030699 -  -7.8  -5.01845   TAGAATAACCAAAAA            GGCAACCA GTTT CGGCTGCC             TTTTTAATAGTTATA  89 46
HC659_RS20710 NONE
      tet(L) 4028712 .. 4028746 -  -6.6  -5.26316   TCATTTTACAAAAAA     GGATCAACCTTG AATTACTTTAA CAAGATTGATCC     TTTCACTCATTTAGC  91 36
        satA 4026118 .. 4026139 -  -7.3  -5.86061   TCTTATCAAAAAAAA           GAAGGGGTT AAAA AACCTCTTC            TTTGAAAAAACGAAA 100 82
HC659_RS20670 4024428 .. 4024449 -  -4.4   -2.8294   GATTCTTGAGAAGGA           GACGCCGA TTTTCG TCAGCATC            AGCTCAACTTGTAAA  48 88
HC659_RS20665 4023520 .. 4023542 -  -9.9  -4.81359   AATTTAAATAGAAAA           GGAGTGAGC CTGAC ACTCACTCC           TTTTGCTCATGAATC 100 176
HC659_RS20640 4020184 .. 4020200 -  -5.1  -5.64421   ATTGGAAATAAAAAA              GGACC CGCTAAC GGTCC              TTTTTTACTGATCAA  88 37
HC659_RS20630 NONE
HC659_RS20625 4017905 .. 4017926 -  -8.8  -4.23104   TTAAACTGGAATAAA           GAGTGCTT GCTGAA AAGCACTC            TTTTTCTGCATCGAA  83 48
HC659_RS20585 4012413 .. 4012436 - -16.8   -4.9181   ATAGAACATGAAAAA          GAGAGCTGCC AGTT GGCAGCTCTC           CCTTTACATCAAAGA 100 34
HC659_RS20575 4010171 .. 4010224 - -25.1  -3.19175   TCTTAACAGACGCAA TGGCTGAATAAGCAAAAAGCATCCCG CGT CGGGATGCTTTTT-CTTATTCACCCA GCTTCTCAATTTGTC 100 15
        hypR 4008642 .. 4008672 -    -9  -4.99947   TTCAATGAAATAAAA       CAAGCAGCAAAGGA GTT CCCTTTGCTGCTAT       TTCTGCTGATCCTTC 100 22
HC659_RS20555 4007832 .. 4007853 -  -8.1  -4.80167   CATGAAAAATGAAAA           GACATTCTT TGAA AAGAATGCC            CATCACAATTAATGT  95 34
HC659_RS20550 NONE
        gdpP NONE
        rplI 4004215 .. 4004238 - -15.4   -5.7946   CGTGGAATAAAAAAA          GAGGCTTGGA TGAA TCCAAGCCTC           TTTTCTATTAAGCTT 100 33
HC659_RS20520 4000064 .. 4000079 -  -3.2  -4.61852   AAGATGATAAAGAAA              TATGCG ATTA CGCCTA               ATGTTGATGCGGACG  66 246
        dnaB 3998496 .. 3998516 - -15.5  -5.95166   TCGAATGAAAAAAAA            CCCCAAGAG CAG CTCTTGGGG            CTTATGCGCCGGGCG 100 27
HC659_RS20505 NONE
        purA 3996442 .. 3996464 - -13.5  -5.27335   GCTTTCAAACAAAAA           CAAGCCCCT TAAAT AGGGGCTTG           CAGACATATTCTATT 100 40
HC659_RS20495 NONE
HC659_RS20490 3996027 .. 3996063 - -12.5  -3.27022   CGGACCTTACAGTAA   TTGTCCG-GAGAGCTG TCGTGT CAGCTCTCACAGACAA    ATAAGGAATTTAGCA  90 58
HC659_RS20485 NONE
HC659_RS20480 3995802 .. 3995823 -  -8.7  -5.79595   TCCTAAAAGAAAAAA           CGCACCTAC GATT GCAGATGCG            TTTGGTAAGTGGCTC 100 33
        walR NONE
        walK NONE
        walH NONE
        walI NONE
HC659_RS20455 3989904 .. 3989914 -  -2.4  -3.16187   TAGAAAAATTATACA                 GCGC AAA GCGG                 AGTGGCCTTCTTCGG  43 8
        htrC 3988582 .. 3988606 - -12.2  -4.34402   TTTTGCATATCAAAA          CAGCCTGGCA AACGA TGCCAGACTG          TTTTGATTAACTTCC  93 32
HC659_RS20430 NONE
HC659_RS20425 3984172 .. 3984194 -  -3.4  -4.87665   GTTCATCCAGAAAAA           CAACCATCTG TTC CAAATGAATG           TTGAACACATCAGCG  69 378
        rocD 3981717 .. 3981732 -  -3.9    -2.508   AAACGAAGTGAATAT              CCCGC CATGGT GCGGA               TTTATGCGTTTTTCA  45 27
HC659_RS20410 NONE
        rocF 3978945 .. 3978986 - -14.1  -3.17075   GGGGGTTCAATTTAA CGAAAGAATCCTAAAAC GGTTTGTA GTTTTAGGATTCTTTCA  TCTTTTCAGCGTGAT 100 183
HC659_RS20390 3977091 .. 3977105 -  -7.1  -4.99035   TCATTTACAGAAAAA               GGCCT TTATC AGGCC               CTTTTCGTTAAAGCT  85 33
HC659_RS20385 NONE
HC659_RS20380 NONE
HC659_RS20375 3974763 .. 3974781 -  -5.3   -5.7946   GGCTCAACAAAAAAA             GAGACTA CACAC CAGTCTC             TTCATAATTAGAGAT  91 40
HC659_RS20370 NONE
        fdhA 3973200 .. 3973223 - -13.2  -4.27441   ATTACCAGCAATAAA          GCCGG-CGTTC TGA GAACGTCCGGC          TTTTTCTTTTACTTC 100 34
HC659_RS20355 NONE
        rlmH 3971821 .. 3971835 -  -3.6  -3.84587   ATTATGGAAATATAA               TTCCTA ATT TAGAAA               TATTCTTTTTAACTT  56 60
HC659_RS20345 3966838 .. 3966870 -  -2.7  -3.61213   AATTATAAATAAAAG      GAGAGAGCCTGAC AGTAAAA ACCAAGCTCTTTC      TAAAATTAATATTAA  48 55
HC659_RS20335 NONE
HC659_RS20330 3962626 .. 3962646 - -12.7  -5.42259   TTATGTTCAAAAAAA            GCTACTTCA CAG TGAAGTAGC            TTCCTTTATTAAATG 100 34
HC659_RS20315 3959803 .. 3959840 -  -9.9  -4.96848   TTTTCTACAGAAAAA   CCCGAACCAGGCACT ACGGTAAA AGTGCTCGATTCGGG    CCAGCTTCTTATAGT 100 34
HC659_RS20280 NONE
HC659_RS20275 3949600 .. 3949622 - -11.3  -4.69214   TATTTAACAAAGAAA           GACTGCCCC GGGGG AGGGCAGTC           TTTTTCGTTTATGAA  95 34
HC659_RS20260 3947830 .. 3947855 -  -3.4  -5.01497   ACCATGATAGAAAAA        CCCATGCTGTTC CAGC GAAC--CATGGG         TTTTTCAGCTGTTAA  70 37
        yxaF 3946019 .. 3946037 -    -6  -3.97834   TAATTGTAGGAGAAA             GGATAACA AAA TGCTACCC             TTTTTTTCTCACCAG  65 20
        qdoI NONE
HC659_RS20240 3943589 .. 3943614 - -14.1  -5.57729   AAATAATAGAAAAAA         GTCTAGACGCC AATA GGCATCTAGAC          TTTTGTTTTCTTTAC 100 20
HC659_RS20230 NONE
HC659_RS20225 3941075 .. 3941103 - -14.6  -5.53991   GATTGATCAAAAAAA        CAGGCTGCCGAG TTAAC CTCGCCAGCCTG        TTTTACTATTTCCCA 100 31
HC659_RS20210 3937761 .. 3937779 - -10.3  -4.22442   AAAGAAACGAAATAA             GAGAGGG GATAT CCCTCTC             TTTTTGTCTTTCAAA  90 36
HC659_RS20200 3936560 .. 3936580 -  -5.4    -5.252   CATTCTCATAAAAAA            GAGAGGCT TCATC ATCCTCTC            TTTTTTTCTGTGTCA  86 16
        htpG 3934487 .. 3934513 - -15.3  -5.69473   TACATTATAAAAAAA         GGAATCGTCTC CTTAT GAGACGATTCC         TTTTTCTGTTTACAC 100 35
HC659_RS20165 3927972 .. 3928002 -  -7.6  -2.83271   CTATTGGCAGAATGA      GTCCGAACAGCGC ACATGG ACGCCGTTCGG-C       TGTTCGTCGTTTAGT  64 36
        iolB NONE
        iolC NONE
        iolD 3924182 .. 3924192 -  -6.8  -3.01712   GCCTCCCCTCTAATA                 CTGC TTC GCAG                 ATTCCAGCTTTTTCT  60 9
        iolE NONE
        iolF NONE
        iolG NONE
HC659_RS20130 3919939 .. 3919980 - -11.7  -2.58999   GTTTTAGATATGAAG GGAGTTCGGCAGGA-AGG CTGTCGT CATATCCCGCCGAACTCC ATGCTCAGCTTATGC  81 35
        iolI NONE
        iolJ 3918148 .. 3918162 -  -9.2    -5.626   CACCGCACAAAAAAA               CCGCCA TCT CGGCGG               TTTCTGGTCTCTTTA 100 38
        yxdJ NONE
        yxdK 3916336 .. 3916368 -  -5.7   -5.0916   CGTTCAACATAAAAA      TCCCCTTGACA TAAATCCATGT TATCAAGGGGA      AACAAAGCGGGCTAT  81 61
        yxdL NONE
        yxdM NONE
HC659_RS20095 3913248 .. 3913271 -  -9.6  -6.28401   TAAAAAATAAAAAAA          CGGCACAGTCA TGA CG-CTGTGCCG          TTTTTTATGATTCAC 100 37
HC659_RS20085 3911668 .. 3911692 - -10.1  -5.10968   AGTAACATATAAAAA          GCTCAACAC AATGCGA GTGTTGAGC          TTTTTTTCTTACTGT 100 34
HC659_RS20070 NONE
HC659_RS20065 NONE
        yidA 3908749 .. 3908770 - -10.2  -5.52347   AATAAAACGAAAAAA           TCCAGCCT TCTAAG AGGCTGGA            TTTTTTATTATTTAG 100 33
        yxeI 3907597 .. 3907625 -  -8.9  -4.77122   TCACATAAAAAATAA        GCTGATCCCGG ATTCATA CCGAAATCAGC        TAATTGAATCTTAAT 100 36
HC659_RS20050 NONE
        snaB NONE
HC659_RS20040 NONE
HC659_RS20035 NONE
HC659_RS20030 NONE
        sndB NONE
HC659_RS20020 NONE
        eutH 3899401 .. 3899423 -  -4.8  -3.89346   TCCCGATTGGACAAA           GTTGAAACAG CTT CTGCCTCAGC           TATGGCTGGCTGAGA  61 21
HC659_RS20010 3898492 .. 3898519 -  -8.4  -4.86939   TAAGAAACTGAAAAA        CGCTCTGGGC GCGGACCT GCCCAGAGCT         TACTTCTCCCAGGTC  95 25
        deoR NONE
        deoC 3896639 .. 3896659 - -11.9  -4.36914   TGTTTCCTCAGAAAA            CGGAAAGCA GTC TGCCTTCCG            TCAGCTCTTAATAGT 100 33
        nupC NONE
HC659_RS19990 3894040 .. 3894066 - -10.9  -5.26875   CCTGTAATCAAAAAA         GCACACCCCAC TCAGG ATGGGATGTGC         TTTATTTTTATTCAG 100 33
        abnB 3884502 .. 3884521 - -13.6  -5.28826   AAAGCTCATAAAAAA            GCGCCTTC TCTA GAAGGCGC             CTTCTCCATCTTATT 100 36
HC659_RS19945 NONE
HC659_RS19940 NONE
HC659_RS19930 NONE
HC659_RS19925 NONE
HC659_RS19920 3881216 .. 3881237 - -11.7  -5.60993   TGTTTTATAAAAAAA           CTCCAAAGA CACT TCTTTGGAG            GGGAAAAATTTATTT 100 35
        yxxD NONE
HC659_RS19905 3878864 .. 3878914 -  -9.9  -6.19302   AGAGAATAAAAAAAA CCTAAATGACACAGATTGCGAGAG TCTC CTCCTGC-ACCTGCACCATTTAGG TTTTGCCTGCTTTCA 100 249
        bglP NONE
        bglH NONE
HC659_RS19890 3874917 .. 3874930 -  -9.5  -6.23545   TCTAAATAAAAAAAA               GCGCC CTTG GGCGC                TTTTTTTACAAATCT 100 39
HC659_RS19885 3873832 .. 3873844 -  -6.2  -6.09196   CCTAAAACAAAAAAA                GGCC GCATA GGCC                TTTTTACATTTTTTA 100 38
        wapA 3866648 .. 3866687 -  -2.8  -3.64703   TCCTCCTCATTTAAA  GTTTAAGTGAGGGTAG TTGTCATC CCCCCCTCGCTTAACC   TTATTAACGCCTTCT  50 29
        wapI 3865976 .. 3866000 -   -13  -5.00884   ATTTGTTCTAAAAAA          GCTTGTATCG CTTAT CGATACAAGC          TTTATCTTCAACTGC 100 226
HC659_RS19870 NONE
HC659_RS19865 NONE
HC659_RS19860 3864167 .. 3864184 -  -7.1  -3.17571   AACCCCTGAAGGTAA             GTGAAAA GCAC TTTTCAC              CCTTCCCTCTTCTGA  63 421
HC659_RS19850 NONE
HC659_RS19845 NONE
HC659_RS19840 3862752 .. 3862769 -  -4.2  -2.88249   GATACTGCTTATAGA             GGTTTT TTCCAT AAAACC              TTCCCCCTTATCAGT  48 36
HC659_RS19835 NONE
HC659_RS19830 NONE
HC659_RS19825 3861946 .. 3861964 -  -8.9  -3.12962   AAAAGGGGAAAATCA             GTGTGAC TTCTT GTCACAC             TTGATCACATCCCAA  71 4
HC659_RS19820 3860652 .. 3860668 -  -2.1  -4.29396   AATGATGTATTAAAA              GCCATCG ATT CCCTGGC              GTTTTAGCTCCTGAA  56 3
        dbpA 3859091 .. 3859120 - -11.5   -4.3129   CAGCCAGCAGCAAAA       TGACCTGCCCC TTTAACTG GGAGCAGGTCA        TTCATCATTTATTCG  91 30
HC659_RS19805 NONE
        licT 3855859 .. 3855911 -    -8  -5.86609   TGAAAAAAATAAAAA CCTAAATTACCATCAGCACAGA-CA GAGA TGATCCGCACTCATTGTAATTTAGG TTTTGCCTGCTTTAT 100 118
        bglS 3854941 .. 3854965 - -12.2  -3.57783   TCATTACAATCATAA          GAGCCTGCTA TATTG CAGCAGGCTC          TTTCACATTTTGCAT  90 40
HC659_RS19785 3851254 .. 3851272 -  -6.8  -4.25104   TGCTCCTTATGAAAA             GTATCTTC CTT AAAGATAC             AGGAGCCGATCAAAT  73 35
HC659_RS19780 3850920 .. 3850936 -  -7.3   -5.7946   TTTCCAATAAAAAAA              GAGACAC AGG ATGTCTC              TTTTTTTACTGTTTG 100 31
HC659_RS19775 3850091 .. 3850120 - -10.8  -2.70946   GTGTGGTAGAAACAT       TGAGCCATATCC CTTTTC GGATATGGCTCT        TTTCATTATTGATAA  78 31
HC659_RS19765 3847391 .. 3847418 - -11.4  -5.14965   ATTCCGATTAAAAAA        GGAAAGCTCC CTTTTTTC GGAGCTTTCC         TCTGCCATTCATTTC 100 34
HC659_RS19760 NONE
HC659_RS19755 NONE
HC659_RS19750 NONE
HC659_RS19745 3843636 .. 3843665 -  -5.8  -6.01187   AAGCAAAGAAAAAAA       CACACTTGATTCC CTAGC GGAG-CAAGTGTG       TTTTTTATGTCATTG 100 35
        galE 3834529 .. 3834550 - -14.5  -3.53012   CCCTTGTTCTTTAAA           GGCCTTCTC TATT GAGAAGGCC            TCCATTCTTATTCCG 100 33
HC659_RS19690 3832511 .. 3832535 - -10.1  -5.37593   TTCTAAATGAAAAAA          TCCCTCTGT TTCAAGT ACAGAGGGA          TTTTTCTTTATTTAG 100 33
HC659_RS19680 NONE
        msmX 3828724 .. 3828742 - -13.2  -5.27779   TTCAATAGCAAAAAA             CCGGACAT CCC ATGTCCGG             TTTTTTTGATCTTAT 100 37
HC659_RS19670 3827676 .. 3827691 -    -6  -5.26119   CCTCGAAAAACAAAA              GCCGCC AGCA GGCGGA               CAGCGGTTTTTTCGG  87 145
        cydA NONE
        cydB NONE
        cydD NONE
        cydC 3817966 .. 3817985 -  -9.3  -5.63517   TTTTCAAACAAAAAA            GACAGCC TTTTAG GGCTGTC             TTTTATTTTACAGGA 100 28
HC659_RS19630 3817042 .. 3817064 - -12.1  -4.71426   GGGGTATCAAGAAAA           GCTGTCTTC TCTCT GAAGACAGC           TTTTTTATCATTCAA 100 33
        sigY NONE
HC659_RS19615 NONE
        yxlD NONE
HC659_RS19605 NONE
HC659_RS19600 NONE
HC659_RS19595 3812469 .. 3812490 -  -2.3  -3.33744   TCTTGCCGGAAAAAT           CGCACAGC TTGTCGG GCT-TGCG           GGAGTTTTTTATGGA  45 103
HC659_RS19580 NONE
HC659_RS19575 3808707 .. 3808726 - -10.7  -5.64274   TGACCTATAAAAAAA            CAGCCGG GATCAG CCGGCTG             TTCTAGATGCGGACA 100 15
        licR 3806559 .. 3806578 -  -6.6  -2.82516   GTTGCTATCATCATA            TTATGAAA TCGC TTTCATAA             ACACTCAGGGTTTTT  58 75
HC659_RS19565 NONE
        celB NONE
HC659_RS19555 NONE
HC659_RS19550 3803115 .. 3803135 - -12.5  -5.72254   GCAAATAAGAAAAAA            GCCGGCCCA TTA CAGGCCGGC            TTTTTTTACGCTTCA 100 31
HC659_RS19510 NONE
HC659_RS19505 3795323 .. 3795343 -  -6.7  -5.80364   ATTGTAACAAAAAAA            GACCGCATG AAA CGAGCGGTC            TTTTTTATTATCGGA  93 33
        ywaC 3794547 .. 3794568 -  -8.7  -6.01187   AAGCAAAGAAAAAAA           GCGAAACCC TGTC AGGCTTCGC            TTTTGTTATCAATCC 100 34
HC659_RS19495 NONE
HC659_RS19490 NONE
HC659_RS19485 3791914 .. 3791933 - -13.6  -5.99154   TATCAAATAAAAAAA            GACGGCAC TTGG GTGCCGTC             TTTTTTTTATAATGA 100 49
HC659_RS19465 3787503 .. 3787523 -  -5.5    -3.494   GAATGTGTGATACAA            CAAAAAAGG TGT CATTTTTTG            AAGATGCGATAAAGC  58 16
HC659_RS19460 3786505 .. 3786527 - -10.7  -5.76237   GAGACAAACAAAAAA           CGCTTTTGA TCATC TCAAAAGCG           TTTTTTTATATCTGT 100 42
        celB 3780254 .. 3780283 -   -13  -3.08032   TTTCGTTTAAAAGGA       GATGATCAGCCC TATGAC AGGCTGATCATC        TATCACTACACATTT  88 31
HC659_RS19430 3777824 .. 3777847 -  -9.6  -5.46706   AGTGTAAAATAAAAA          GGCCATTCAG TTCA CTGAATGGCT           GACAGGCTTACTTAT 100 33
HC659_RS19420 3775889 .. 3775909 - -10.4  -5.71712   TTCTACATAAAAAAA            GCTGCCCC TGAAC AGGGCAGC            TTTTTCATTATTTTT 100 33
HC659_RS19395 NONE
        thiM NONE
        thiE 3770757 .. 3770777 -  -7.6  -5.38497   ATGGAAAGCAAAAAA            GCTGTCCT TTTAC AGAACAGC            CTTTTGAAGGAAGAT  95 47
        efeU NONE
        efeM NONE
        efeB 3766755 .. 3766771 -    -8  -5.00616   TGTTTTTTTAAAAAA              GAAGCC GATAA GGCTTC              TTTTATGATTCCAGC  89 28
HC659_RS19365 3766058 .. 3766075 -  -9.9  -5.85737   ACAGGAATAAAAAAA             GCTCTCT TTAT AGAGAGC              TTTTTCCTTACTTTT 100 33
        slrC NONE
HC659_RS19340 3762154 .. 3762169 -  -2.6  -2.58418   TCTTCATAGAAAACG              GCAG-AT CAT ATGCTGC              AGTCCTCTCATACCC  41 33
HC659_RS19335 NONE
        galT 3759370 .. 3759392 - -13.5  -4.93595   ATAAAAATCGAAAAA           GCCTCAACC CTAGC GGTTGAGGC           TTTTGACTGGTTTGG 100 12
        qoxA NONE
        qoxB NONE
        qoxC NONE
        qoxD 3754572 .. 3754591 - -12.2  -5.27399   GAAGACAGCAAAAAA            CCCTCTTC CAAT GAAGAGGG             TTTTTTGTATTATTC 100 35
        rodA 3752591 .. 3752612 - -10.9  -5.60993   CTCTGCACAAAAAAA           GACAGCCTC TGTA AAGGCTGTC            TGCATATTAAGAATT 100 32
        nfsA 3751740 .. 3751757 - -11.3  -5.19879   CGTGAAACATAAAAA             CCTCTCC AGAC GGAGAGG              TTTGCTTTAGTTTTT 100 32
HC659_RS19285 3750558 .. 3750578 - -18.3  -5.29445   GTTGAATAAGAAAAA            GCCCTGCCG AAT CGGCAGGGC            TTTTTAAAGATCAGT 100 36
HC659_RS19275 NONE
        sacT 3746396 .. 3746419 -    -6  -5.84381   TGATCAATAAAAAAA          CTTCCAGAGA TCAC TCCCTGCAAG           TCAAAGCGGTTATTC  93 35
        scrA NONE
HC659_RS19255 3742485 .. 3742499 -  -2.9  -4.84311   TTTCACATAAGAAAA               TAGAA GGATT TTCTA               CATAAGTGTCCAAAT  65 23
HC659_RS19250 3742131 .. 3742149 - -13.2  -5.36441   TTTTCACAGAAAAAA             CTGCCGAT CCC ATCGGCAG             CCTGTTTATTTGATT 100 31
HC659_RS19240 NONE
HC659_RS19235 3739542 .. 3739558 - -12.3  -5.65927   TACTCAAATAAAAAA              GCGCAGA GTA TCTGCGC              TTTTTACAAATCCTT 100 29
HC659_RS19225 NONE
HC659_RS19220 NONE
HC659_RS19215 3735871 .. 3735898 - -12.2  -5.64304   CAAGATAAGAAAAAA        GCCAATCACTCAT ATG ATGAG-GATTGGC        TTTTTTGATTATAGA 100 34
        spsA NONE
HC659_RS19200 NONE
HC659_RS19195 NONE
HC659_RS19190 NONE
HC659_RS19185 NONE
HC659_RS19180 NONE
HC659_RS19175 NONE
HC659_RS19170 NONE
        rfbB NONE
        rfbD NONE
HC659_RS19155 3724814 .. 3724838 -  -3.6  -5.51165   AAAAGGGCAAAAAAA         GTCGAAGATGC CTCT GC-TCTTCGAT          TGATCACGTTCCTAT  81 43
        bslB 3724027 .. 3724049 - -11.4  -5.66684   GAATCCACAAAAAAA           GAGACTGAAA ACA TCTCAGTCTC           TGACTACAAATCTAT 100 44
        rocG 3722587 .. 3722603 -  -3.7   -5.0666   TACGCAAAAAACAAA              TGCAAAA TTA TTTTGCG              GAGGCTTCTCAAATT  72 39
        pruA 3720799 .. 3720826 - -12.1  -3.81062   ATCAAAAAGTTGAAA        TCGTGCGATCC GCTAAA GAATCGCACGA         TTTTATTTCTCTCAA  93 42
HC659_RS19135 NONE
HC659_RS19130 3717630 .. 3717651 - -15.9  -5.52909   TAACACGTAAAAAAA           GCTCTCCGG CCTC CCGGAGAGC            TTTTTCTATTGCGCC 100 31
HC659_RS19125 3716165 .. 3716178 -  -6.7  -6.04953   ATACAAACAAAAAAA               CCCTT TAAA AAGGG                TTTTTAATTATAGGA 100 56
        bacA NONE
        bacB NONE
        bacC NONE
        bacD NONE
        bacE NONE
        bacF 3710153 .. 3710174 - -14.5  -5.07941   AAAAGCATATAAAAA           CATCCCGCT TTTT AGCGGGATG            TTTCTTGTAATGACC 100 15
         pta 3707192 .. 3707215 - -14.6  -5.11033   CAGAAGCGCAAAAAA          GGCAGCCCTC GGTC GAGAGCTGCC           ATTGTCTTCAATTTT 100 42
        cysL NONE
        ywfL 3705255 .. 3705283 - -11.7  -5.24129   GCTTGTCATAAAAAA        TGCATGCCGGC ATATACA GCCGGCATGCG        AAGAACGTTCACCCA 100 34
HC659_RS19065 3704101 .. 3704126 - -10.5  -5.06505   AATGACATAGAAAAA         TCCCAAAACGG GCAG CTGTTTTGGGA          TTTTCGGCATGTGCA 100 133
HC659_RS19055 3702837 .. 3702857 -  -5.4  -5.26875   TTGTGAAGCAAAAAA           GCCT-GACC TGAG GGCCGAGGC            TAAGAAAAAATATGT  86 43
HC659_RS19050 NONE
HC659_RS19045 3700840 .. 3700866 - -13.2   -5.7946   TTGTCAATAAAAAAA         GCAAAAGAAACG GAT CATTTCTTTTGC         TTGGTATGGTTAACA 100 35
HC659_RS19040 NONE
HC659_RS19035 3698596 .. 3698626 - -11.2  -5.71712   GTTCATATAAAAAAA       CACACCCATCCCTC TAA AAGGGACGAATGTG       TTGATCATCCGTGGT 100 293
        thrS 3696112 .. 3696123 -  -4.4  -4.86862   GTCAAAAAAGCAAAA                TGTG AATT CACA                 GCTTTTATCCTACAT  71 35
HC659_RS19025 3695562 .. 3695582 - -11.8  -3.90729   AATAATCTCTATAAA            GCCGGCGC TTCGC GCACCGGC            TTTTATTATCCCTAT  91 37
HC659_RS19015 NONE
HC659_RS19010 3693941 .. 3693979 - -10.4  -4.57837   ATATCCCCCTAAAAA   TGAAAAACCCCGAGTC TTGTTTC GGCTCGGGATTTTCCA   TGTCCTATTTCTGTA  95 109
        speE 3690632 .. 3690652 -    -9  -5.00616   CTTTCCTGTAAAAAA            GCGCAAGA TTCGC TCCTGCGC            CATACCTTCATTATT 100 36
        speB 3689704 .. 3689724 - -14.1   -5.7946   CTGGGAATAAAAAAA            CATCCAGAC ATC GTCTGGATG            TTTACTTATTTCACA 100 31
HC659_RS18975 NONE
HC659_RS18970 3686284 .. 3686296 -  -4.1  -3.85817   ACGTCCTTTTAGAAA                TGCAC AAC ATGCA                GCGGTTAAATCGTAA  56 30
HC659_RS18965 3684396 .. 3684444 -  -6.8  -3.91164   AATCCGTGAAAAACA TGACAGCAGCTTTTCAGAAACT CACAC AGTCTCATCAAAGCTGCTGTGA CTTTCAGCAACACAA  68 467
HC659_RS18915 NONE
HC659_RS18910 3675500 .. 3675523 - -11.8  -5.60993   TTTCTCATAAAAAAA          GGACAAAGCC CGAA GACTTTGTCC           TTTTGATCGTAATTA 100 38
        narK NONE
         fnr 3673372 .. 3673391 - -10.8  -5.55698   CACAAGGTAAAAAAA            CAAGGACA CCGC TGTCCTTG             TTTTTTTCAGTCAAT 100 32
HC659_RS18890 3672017 .. 3672037 -    -9   -5.9663   AAAGATCAAAAAAAA            CCGGCTCT ATTTA AGAACCGG            GCTCAGCGTTTTCAT 100 15
HC659_RS18885 NONE
        narH NONE
        narJ NONE
        narI 3665422 .. 3665439 -  -9.1  -5.24129   CCTTGGCAGAAAAAA             CCCCCTC TTGC AAGGGGG              ATTTTCACGAGCGTT 100 30
         cls 3663458 .. 3663473 -  -6.8  -3.48276   TTTTTTCTTACAGAA              CACCTG AAAA CAGGCG               GGCAAACGACTCTTT  64 2
HC659_RS18855 NONE
HC659_RS18850 3661063 .. 3661104 - -15.5  -2.52795   AAGCGCTCTAACTTA CATACAAAAAAGGATAGAC ATCT GTCTATCCTTTTTCTTATG  CTCTTACATAATGGA 100 21
HC659_RS18830 NONE
        acdA 3654999 .. 3655011 -  -3.4   -3.0516   TATCAATAATGAAAG                CGAT TTTGT ATCG                TTCTTATACAAACCA  45 140
HC659_RS18820 3654294 .. 3654321 - -17.2  -4.67697   GGTGAAAATAAGAAA        GCTCCCTTTCAA TTTC TTGAAAGGGAGC         ATAACGTACTATGTT 100 126
        pyrG 3652536 .. 3652565 -    -8  -5.85425   GAAACAAATAAAAAA       GACTTGCCCGCTT TTGAC AAACGG-CAAGTC       TTTTTTATTACTTCT 100 33
       spo0F NONE
HC659_RS18800 3650348 .. 3650370 - -13.4  -4.27861   AAGATAGACGGAAAA           CCGCCTGTCA AGC TGTCAGGCGG           CTATAAAAAGTTCCA 100 47
         fsa 3649592 .. 3649628 -  -8.8  -4.32857   TCGGTGAAATACAAA   GGCCGCGGCAAACAG GCATAAAG CTGTTTGCCGCC-CC    TTTCATTATTTGTTC  83 31
HC659_RS18790 NONE
        glpX 3646942 .. 3646957 -  -8.2  -3.92659   TCTGCAAAAGTTAAA              GCGGGC TCAC ACCCGC               TTTTTCTGTTTGTTA  77 38
HC659_RS18780 3646555 .. 3646569 -  -3.6  -2.52681   AGAGGAAATAGATAC               GTCTTT CAT AAAAAC               ACCACGCTTTTCATA  45 50
         rho NONE
        rpmE 3644923 .. 3644945 -  -9.2  -5.53436   AGACAATATAAAAAA           CAGGCAAG ACTGCTG CTTGCCTG           TTGAGAAATCTATTA 100 41
HC659_RS18765 3644236 .. 3644256 -  -5.4  -6.12328   AGAATATAAAAAAAA            CACCGG TGTTTTTAG CCGGTG            CATTCTATCTTTATA  95 54
        malS 3642266 .. 3642280 -  -4.2  -3.50133   TAGCTTTACAAAAAG               CTTTCC CTC GGACAG               AAAAATTTACTCGCT  55 43
HC659_RS18755 3641232 .. 3641248 -  -9.4  -5.01042   AACCTAAAGCAAAAA              GCTCCC GTAAA GGGAGC              TTTTTTTGTTACGCA 100 34
        prfA NONE
        prmC NONE
HC659_RS18730 3637724 .. 3637742 - -13.2  -5.44119   TTTACTGCAAAAAAA             GGAAGCCT AAG AGGCTTCC             TTTTTTATTAAAACA 100 33
      spoIIR 3636536 .. 3636547 -    -3  -3.69094   AATCTATGAGGCAAA                TCTA TTTT TAGA                 CCAGATGATTAGGAA  50 34
HC659_RS18715 3635979 .. 3636011 - -12.1  -4.63218   TGTCCTGTAATAAAA      CAAGCGTTATCCACA AAT TGTGGACAACGCTAA      TAAAGAAGTGGATAA 100 60
HC659_RS18710 3634778 .. 3634832 -  -6.6  -4.17296   TCCGACATACATAAA TAACCCCCTT-GGACACGC-CCCGCT TTTTT AGCCTATGCGTGTCCAAAAAGGGTTA GAACATCTGACTGCT  70 42
HC659_RS18705 3634181 .. 3634199 -  -4.6   -5.5353   TATATGAAGAAAAAA             GAAACG GCGACTT CGTTTC             TTTTATTGGTATATT  84 39
HC659_RS18700 3633661 .. 3633672 -  -2.2  -2.91873   AGGATTTGCAAATGA                CCTG TTTG CAGA                 TTTTCTGACAACTTA  41 38
        rpiB NONE
HC659_RS18690 3632500 .. 3632525 -  -8.4  -5.07652   TGTCTTAAAATAAAA         GAAAAGACTG GCTATG CAGTCCTTTC          ATTCGCACTCATAAA 100 24
        glyA 3631035 .. 3631059 - -11.4  -5.04987   AACATCGTCAAAAAA         CCCGCC-GGGC ATAA GCCCAAGCGGG          TTTTAGGATCTTAAT 100 36
         upp 3630278 .. 3630301 - -11.8  -5.63504   AACTGGATAAAAAAA          TGAAACCCCC TTTT GGGGATTTCA           TTTTTTATTTTGTTC 100 30
HC659_RS18675 NONE
        atpB NONE
        atpE 3628441 .. 3628472 -    -3  -3.67481   TCAGACATAAAGCAA      TGGCGAAGGTTCTCT TGG AATGATC-TTCGCCA      TTTTTAGTTCATATA  50 53
        atpF NONE
HC659_RS18655 NONE
        atpA 3625718 .. 3625744 - -13.2  -4.57569   TCATCTGCGTAAAAA         GAGAGAAAAAGA GAA CCTTTTTCTCTC         ATCAGCATTCGAGTT 100 39
HC659_RS18645 3624828 .. 3624840 -  -6.2  -3.59979   TCTTTCTATTCTAAA                GCGG CTGCT CCGC                CGACAATTTCCGTAA  61 3
        atpD NONE
HC659_RS18635 3622921 .. 3622941 -  -9.8  -5.60993   TCGTTCATAAAAAAA            TCCTTCTC ATAAA GAGAAGGA            TTTTTTCTTATTTCC 100 33
HC659_RS18625 3622038 .. 3622055 -  -2.1  -4.16921   GAATAATGTTCAAAA             CCTAT-TA AAA TAGATAGG             GAAGCTGCTGTGAAT  53 12
HC659_RS18620 NONE
        murA 3619785 .. 3619809 - -10.1  -6.07374   ACAAAAAATAAAAAA          CCAGTATGCCA GAG TGACATACTGA          TTTTCAAGTAAGTTT 100 39
      spoIID 3618566 .. 3618598 - -16.5   -3.2247   AAAGATATTCAGGAA      CAGAAAAAGACGCCC AAT GAGCGTCTTTTTCTA      CTTTTTCGCCATATA 100 23
HC659_RS18605 3617498 .. 3617519 -  -8.7  -5.03994   TGTTACATACAAAAA           GAGGCTGAC CATC ACCAGCCTC            TTTTTTCTTATTTAG 100 33
HC659_RS18600 NONE
HC659_RS18595 3616496 .. 3616513 -  -6.2   -5.9003   AAACCAATAAAAAAA             GGCGCC TGGGGG AGCGCC              TGATCTTTAGGTTCC  93 41
HC659_RS18590 3616121 .. 3616142 -  -5.1  -5.03994   TCTGAGACACAAAAA           GAGCCCTCT ATAT AAAGGGCTT            TCACAGGATGTGATG  76 156
        fdhD NONE
        moaA 3614174 .. 3614197 -  -8.9  -5.46657   GATTCTAATAAAAAA          GCTTACCGG ACAGTG CCGATAAGC           TTTTGACTTCATTTT 100 39
        rapB 3612861 .. 3612878 -  -9.9  -6.22802   TTGCATAAAAAAAAA             CCATCTG CCAG CAGATGG              TTTTGTCTCATACTT 100 33
HC659_RS18570 NONE
        csbD 3611953 .. 3611977 -  -7.9  -5.83226   AATCGAACAAAAAAA          GACAAGAAACA TTT CGTTTCCTGCC          TCTTCCGTACGATTA 100 38
HC659_RS18560 3611455 .. 3611468 -  -3.1  -3.42583   CTAATACAGCGACAA               TCTGCC CCG GGC-GA               AGCTAAGGCTGTGCA  48 68
HC659_RS18555 3611063 .. 3611086 -    -6  -2.62616   TCAGGCGGGACATCA          CCTCCCTTTCT TCG AGAATGGG-GG          TCATACGGTAAGATG  54 120
        ureA NONE
        ureB NONE
        ureC 3608564 .. 3608584 -   -14  -3.68988   TTTTAGTCAATAGAA            CGGCCGGA TGCAC TCCGGCCG            CGTCTTATCAGAATA 100 33
HC659_RS18535 3608043 .. 3608068 -  -9.9  -2.57931   GTTAGCGGTGAGAAG         TCATCCCTTTT GATT AAAAGAGATGA          TTCATAACATCTTTT  74 13
HC659_RS18530 3607316 .. 3607345 - -13.7  -2.79276   AGCACTTATTAATGA       GAAAAACCCGGAG CTGG CTCCGGGTTTTTT        ATTATTCCGCTTCGC 100 27
         mta 3605996 .. 3606031 - -16.3  -2.53822   CCGATCTTATAAGAT    GCGAAAACCCCCGGCC TTTAC GGCCGGGGATTTTC-C    TGATGGTCACAGTAA 100 7
HC659_RS18510 3603818 .. 3603858 -  -9.7  -5.47218   CTGCATGCAAAAAAA  CACACCCGGATCGTCTGGA AAA TCTCAACAATCCGGGTGCA  GATCTTCTTTAATAC 100 34
      spoIIQ 3601552 .. 3601572 -  -5.4  -5.82172   AGTAACAGAAAAAAA            CGCCCATC ACAAG GATAGACG            TTTTCTTCATTAAGA  91 35
HC659_RS18485 3601020 .. 3601047 -  -9.2  -4.89838   CTAAGAAAGACAAAA        GCCGGC-GTCT GAAATCA AGACAGCCGGC        TTTAATATTTCTCAT 100 27
HC659_RS18465 NONE
HC659_RS18460 NONE
HC659_RS18455 3595784 .. 3595807 -  -7.4  -5.38549   CTTAAACAAGAAAAA          GAGACAGACC TCAG AGCCCGTCTC           TTTCTCAAGATGCAG  95 30
        pucI NONE
HC659_RS18445 3592607 .. 3592639 -   -10   -5.4251   TTTACATATAAAAAA     CGGCGTCCCTCTCAGT TGA AC-GAGAGA-ACGCCG     CTTATGGCAATTATT 100 36
HC659_RS18430 NONE
     spoIIID 3590159 .. 3590169 -  -5.4  -3.04517   ATCCTCCTTGAAAAT                 CTGT TTC ACAG                 TAAATATCCACATTG  53 157
         mbl 3589102 .. 3589124 - -10.7  -5.60993   TTTTTCATAAAAAAA           CCTCATTCT TTTTC AGAATGAGG           TTTGTGAAATCAGCT 100 35
        flhO NONE
        flhP 3586949 .. 3586960 -    -3  -4.07437   AAAAGTATTAAAGAA                TCAA GAAT TTGA                 AATGAATTCACCAGT  56 382
        fabZ 3585578 .. 3585603 -  -6.9  -5.63517   TTTGTAAAGAAAAAA         GACAAATGTGCC GCT GGC-CATCTGCC         TTTTTTCAATTATTC 100 35
        mscL 3585121 .. 3585141 - -11.9  -5.72616   ATTGAGATAAAAAAA            GACGCCGTT TCT AACGGCATC            TTTTTTATTCCGGCG 100 30
HC659_RS18385 NONE
HC659_RS18380 3583560 .. 3583580 - -15.5  -5.14563   TTCTGCATGAAAAAA            GCTGCCGTT TTG AACGGCAGC            TTTTCTCTTCGTGCT 100 56
HC659_RS18370 3582497 .. 3582509 -  -3.3  -4.67168   AAAAACGCTTAAAAA                TGGCT TTC AGCCT                CTGTTTTTATCTTTC  64 19
         ssb 3581997 .. 3582013 -    -8  -4.56117   GACAAAAAGAAAGAA              CCAGTC TGGTC GACTGG              TCAATTTTGAGGGGA  84 97
        glcR NONE
HC659_RS18355 3580110 .. 3580130 - -15.5  -5.19212   ATCATGACTAAAAAA            GCTGGCTCT AAA AGAGCCAGC            TTTTTTCCGTTCATA 100 116
HC659_RS18340 3575359 .. 3575379 -  -8.3  -5.60993   CCTCGCATAAAAAAA            TCCCGCA AAAGGCG TGCGGGA            TTTTTATGTTGCATA 100 29
        tkmA NONE
        ptkA 3573675 .. 3573703 - -11.9  -4.56597   CTTTTTTCGCAAAAA        TAAATAACGGGCA CGA TGCACGTTATTTA        TTTTGCATGAAATTG 100 19
HC659_RS18325 3572712 .. 3572726 -  -5.6  -2.85503   CTCCAACAGTTAAAT               TGCTGC TTT GCAGCT               TCCGTAATATCGTAT  52 183
        uglF 3571336 .. 3571354 -  -6.7  -5.62219   AATAGATGAAAAAAA             GACTGGT GCGCA ACCAGCC             TTTCTTTTTCATCTA  93 38
HC659_RS18315 3570241 .. 3570265 - -10.1  -3.62864   TAAAGGCACTTGAAA          GAGGCAGAT GTGGTTG ATCTGCCTC          TTTCGGCGCTGAGCT  80 142
HC659_RS18305 NONE
HC659_RS18300 NONE
HC659_RS18295 NONE
HC659_RS18290 NONE
HC659_RS18285 3566187 .. 3566212 -  -5.5  -5.77988   ACACATACAAAAAAA         CACTTGATGACT TAG AGCC-CCAAGTG         TTACATGTGATTTTT  88 26
HC659_RS18275 NONE
HC659_RS18270 3564339 .. 3564354 -    -9  -5.38047   CATTTATAGAAAAAA              GCACCT GGAC AGGTGC               TTTTTTATTTTGGCC 100 30
         ggt 3560501 .. 3560528 - -14.2  -5.69023   AAAATATCAAAAAAA        GAACACCCAGAG TAAG CTCGGGGTGTTC         TTTTATGAAACGTTT 100 422
        cotH NONE
        cotB 3556494 .. 3556516 -  -3.4  -4.74103   CCTTTAACTGAAAAA           GGGCATCA CTTTATC TGATGCTC           CTCCATTATCTATTA  67 38
HC659_RS18220 3555755 .. 3555780 -  -4.7  -5.01811   GTATGAAACGAAAAA         CTGCCTTCT GCTTTTCA AGAGGGCAG          TTTTGTATACACTAG  76 37
        alsS NONE
        budA 3550554 .. 3550578 -  -7.2  -5.31519   AGAGCCAAATAAAAA          GAAAGCCC TGCTAAAAG GGGCTTTC          TTTTTTTCTTTTATT  95 36
HC659_RS18195 3549928 .. 3549959 - -12.4  -4.42806   GGATTTTTAAACAAA      TACAGCCCTGCC GTATGTTG GACAGGGCTGTA       TTTTAAACAAAAGGC 100 28
        pgsB NONE
        pgsC NONE
        pgsA NONE
        edmS 3539395 .. 3539418 -   -14  -5.27335   CTGGGCAAATAAAAA          GAGAGTGTCT CATC AGACACTCTC           TTTTTTGAATTATTT 100 35
        pgdS 3538019 .. 3538037 -  -8.9   -5.0065   TATGCATAAAGAAAA             GACTCCA GAGAT TGGAGTC             TTTTTCTTTTATTGC 100 34
HC659_RS18115 3534291 .. 3534322 -   -16  -2.69596   GGGAAAGTAAGCAAT      CAAAAGGGTGCGCA TGAT TGCGCACCCTTTTT       TATGTTCCGACAGTC 100 25
        manA 3529362 .. 3529384 -  -7.1   -5.7946   TTTCTAATAAAAAAA           CTTAACCTC GAAGT GAGATTAAG           TTTAAATATGAGACA 100 27
        lytD 3526559 .. 3526599 - -21.5  -3.30243   ATTGAGGTGTGATAA  TCAAATAGGCTGTAGCTAT TTA ATAGCTACAGCCTATTTGC  AACTTTCTAAGTTTT 100 41
        tagD 3522305 .. 3522330 - -12.1  -4.81083   TGTAAGCATCAAAAA         GTACTTCTTAT TTCA ATAAGAAGTAC          TTTAATTAGATATTG 100 65
        tagE NONE
        tagF 3517891 .. 3517910 -   -10  -4.71382   ACAAGTATCTAAAAA            GCTGCCGA AATA TCGACAGC             TATACATTTTATAAA  91 51
        tagG NONE
        tagH 3515310 .. 3515335 - -12.7  -5.34381   AAATCTAAACAAAAA         GGCTATTGGAC ATTC ATCCAATAGCC          TTTTTTTATTTCAAC 100 31
HC659_RS18035 NONE
HC659_RS18030 NONE
HC659_RS18025 3511765 .. 3511775 -  -2.6  -3.28405   ACAAGAGAGTACTAA                 TTTT TGC AAAA                 CAATTTTAATTTAGT  45 62
        ggaB 3508928 .. 3508949 -  -6.7  -4.32046   CTTTTAAAAAGTAAA           GAGAAG-TCT CGC AGAACTTCTC           CCAACATTTGAAGTG  73 62
        wecB 3505987 .. 3506013 -   -16  -5.56372   AAAGTAAAACAAAAA         GAAGCTTCGCAC AAT GTGCAAAGCTTC         TTTTTTATTTGCCTG 100 30
        lytA NONE
HC659_RS17990 NONE
        lytC 3500862 .. 3500889 - -11.5  -5.37043   ATTTCATATAAAAAA        GAGACAAATCT GTGATT AGATTTGTCTC         TTTCGATTATCTGTA 100 32
HC659_RS17980 NONE
HC659_RS17975 NONE
HC659_RS17970 NONE
        tuaD NONE
HC659_RS17960 NONE
HC659_RS17955 NONE
HC659_RS17950 NONE
HC659_RS17945 3491606 .. 3491631 -  -2.6  -3.78682   GTATAATCAAAAAAC         GCGCA-TCCCA ATTTA TAGGACTACGC         ATGTTTTTGAATCCC  50 20
HC659_RS17940 3490382 .. 3490401 - -10.7  -5.60993   TTGCGCAGAAAAAAA            CTCCGGC ACATAA GCCGGAG             TTTTTAATTCCTTTT 100 29
        degS NONE
        degU 3486324 .. 3486347 -  -8.9  -5.44119   GGCAGCCTAAAAAAA          GACCTGCCT AGTAAA AGGCAAGTC           TCCTATTATACTATC 100 36
HC659_RS17915 3485387 .. 3485407 -  -8.3  -5.86465   AAGAATATAAAAAAA            TCTCCGCTC TAA AAACGGAGA            TTTGGCCTTATTTAA 100 33
       comFA NONE
       comFB NONE
       comFC 3482867 .. 3482885 -  -3.1  -4.84761   ATATCGGCATAAAAA             CAGAATC ATTTA GCTTCTG             ATCAAGGTAAAAGAT  67 16
HC659_RS17895 NONE
        flgM NONE
HC659_RS17885 NONE
        flgK NONE
        flgL 3479071 .. 3479089 -  -3.1  -5.71983   TGAACTATAAAAAAA            GCGAACTC CTAA GAGC-CGC             TTACTTTAAAAAGTC  84 26
HC659_RS17870 NONE
        fliW NONE
        csrA 3477795 .. 3477815 -  -6.9  -6.23317   ACAAAAATAAAAAAA            TCCTCAC TTTTTTT GTGAGGA            TAATGCGGAGATCAC 100 8
         hag 3476708 .. 3476728 - -13.3  -4.59424   AAATTTAAATTAAAA            GACCCTGGC AAC GCCAAGGTC            TTTTTTAAAATTAAC 100 36
        flaG NONE
HC659_RS17845 3474658 .. 3474670 -    -2  -2.73124   TGTCATCCTCCAAAT                TACA TTTAT TGTA                CAAGAAGCTGTGATA  40 18
        fliS 3474239 .. 3474258 -    -2  -2.64735   AGTTGATCTATATTA            TTCATGCG ATCC CGCCTGAT             CCGTGCCGGTCCTTC  40 7
        fliT NONE
HC659_RS17830 3473403 .. 3473413 -  -2.6  -2.51057   GCTGAAACATAAATC                 TTTT GTG AAAA                 TTCAGTGAACTTTGT  41 127
         hpf 3472722 .. 3472744 - -11.3  -5.74684   TAAGAAAAACAAAAA           CCTTCCGCG GACAT CACGGAAGG           CTTCTCTTCATTATT 100 36
        secA 3470015 .. 3470039 -   -15  -2.83772   ACCTCATTAAAAGAT         CCGCAGGCGCC TGCA GGCGCC-GCGG          TCAGTAAACTTGCCG 100 48
        prfB 3468859 .. 3468881 -    -7  -6.08342   TAAGAAATAAAAAAA           CACACCCG TATGCAT CAGGTGTG           TTTTTCAGCTTATGA 100 35
HC659_RS17810 NONE
        cccB 3467458 .. 3467484 - -13.1  -4.91712   GTCAAGGCATAAAAA         CATCCTTGCCA GCACT CGGCAAGGATG         TTTTTATCTTACTTT 100 34
        ftsE 3466580 .. 3466590 -    -4  -2.76453   CGAGAATTTTAATCA                 TATG AAC CATA                 CTCCCCTCTTGACTC  46 8
        ftsX 3465653 .. 3465687 - -14.5  -3.95126   GAAAAAGAAGGCAAA    TG-AAAAGCCGTCCCG AAAA CGGAACGGCTTTTTCA     CTTTATACTCGCAGA 100 28
        ctpB 3464087 .. 3464106 -  -8.6  -3.91213   AAGCACAAAGAAACA            GGAGATGA AATA CCATCTCC             TTTAATTGACAAATA  80 27
        swrA NONE
        minJ 3462059 .. 3462094 - -20.5  -4.67608   CAGCGTAACACAAAA    CAGCCCGGCATCGCA TCATCC TGCGGTGCCGGGCTG     CCTTTTATGATCCCG 100 30
HC659_RS17760 3456814 .. 3456838 - -11.6  -5.24129   TTTGTGTATAAAAAA          CCTGCTTTTA AAACG TAAAAGCAGG          TATTCAGTCTTTATA 100 56
        uvrB NONE
        uvrA 3451756 .. 3451794 - -11.1  -5.27335   TGCCGTAAAGAAAAA  GCTTGCCTGCTAAGCCCA AGGA TGGACTT-GCTGACAAGC   TGTCCCCTCTTAACA 100 48
HC659_RS17735 NONE
HC659_RS17730 NONE
HC659_RS17725 NONE
HC659_RS17720 3448492 .. 3448509 -  -8.4  -5.13473   ACCACATGTAAAAAA             GCTGCC TTTGCG GGCAGC              TTTTTTTATTTTTTT 100 31
HC659_RS17705 NONE
        cypX 3444306 .. 3444327 - -10.1  -3.97602   ATATATGTAAAAAGA           GTCTCACCC GCAT GGGAGAGAC            CTTTGGAATTCTATT  85 39
HC659_RS17690 3439779 .. 3439807 - -14.7  -5.60993   TCTTTCATAAAAAAA        GCCTCCAACCCTT TTT AAGGATTGGAGAC        ATGGCGAAAATCAAA 100 11
HC659_RS17670 NONE
HC659_RS17665 NONE
HC659_RS17660 NONE
        ppaX NONE
        hprF 3433030 .. 3433053 - -12.5  -5.80364   ATTTTAACAAAAAAA          GTCCGCTGA TGTTAT TCAGCGGAC           TTTTTCAATCTTTCT 100 13
HC659_RS17635 NONE
HC659_RS17630 NONE
        hisD NONE
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
HC659_RS17600 3424669 .. 3424687 - -13.2  -5.54907   TTCACAAAACAAAAA             GAGCCGTA TCA TACGGCTC             TTTACTCTTCAATCT 100 27
HC659_RS17595 NONE
HC659_RS17590 3421797 .. 3421809 -  -3.4  -3.09908   CTTTCTGAAAATAAG                GAAG TCACT CTTC                ATATTCCTCCTAAGG  45 35
HC659_RS17585 3421416 .. 3421442 -  -8.1  -5.50723   TGATCAAAATAAAAA         TCTCCCACTCA TTGTT TGAATAGGAGA         TTTTTATGTTAGAGC 100 34
        bmrA 3419465 .. 3419487 -  -8.5   -4.1964   CTCAATAGTTCAAAA           GGAAGGATT GGGAA AATCCCTCC           TCTTTTTTATTGGCT  81 55
HC659_RS17575 3417903 .. 3417925 -  -7.1   -5.8187   TATCTAACAAAAAAA           GAGTCGATT AAATA AATCAACTC           TTTAAAATTTACTAT 100 37
        cwlO 3416099 .. 3416122 -  -8.9  -4.68209   ATGTTAATAAAGAAA          GAGCCTTCT GTTTAT AGAAGGCCC           TTGTCATATTTATTA  90 38
        trxB 3414824 .. 3414851 -  -3.5  -5.64274   TTATGGACAAAAAAA        GGACACGGAT AACTGGAGA ATCCGTG-CC        AAAAAAGTGTATTCA  84 153
HC659_RS17560 NONE
        rapZ NONE
        mgfK NONE
        whiA NONE
HC659_RS17540 NONE
HC659_RS17535 3410270 .. 3410290 - -11.9  -5.18726   TGTTCATAAGAAAAA            GCTTGCAGA TAA CCTGCAAGC            TTTTCACGTTACAAA 100 34
        psdR NONE
        psdS 3408080 .. 3408093 -  -2.3  -4.91109   TCTTTATTATAAAAA               GGAAG TCAG CATCC                TCCCATCGAACTTTC  66 62
        psdA NONE
        psdB 3405324 .. 3405345 - -14.5  -5.09521   TCAATAAATCAAAAA           TCCGGTCTG ATAA CAGACCGGA            TTTCATATTACATAC 100 33
HC659_RS17500 NONE
        sulP 3401729 .. 3401745 - -10.8  -5.30686   AACATGCATAAAAAA              GCGGCC GCGAT GGCCGC              TTTTTTTAACCTGTG 100 31
HC659_RS17485 3400603 .. 3400625 -  -9.2   -5.7827   AAGAGAAATAAAAAA           GAGATTTCCC TTA AGGAAACCTC           CCTTTGTTAAAAACA 100 112
HC659_RS17480 3399548 .. 3399558 -    -4  -3.76568   TTACCGATAACAGAA                 TAAG GCG CTTA                 CAGCGTTGATTCTCG  54 23
        mdxD 3397611 .. 3397621 -    -4  -3.62849   TTTACGAAACTATAA                 CAAT TGT ATTG                 TCCTATAGAAAGCGG  52 78
        mdxE NONE
        mdxF NONE
        mdxG NONE
HC659_RS17455 NONE
        mdxK NONE
        malL NONE
        pgmB 3388615 .. 3388640 - -13.4  -3.88015   AAAGTAATAACACAA         CCTGCAAGAG CTGCGT CTCTTGCAGG          TTTTTTCATTTAAAC 100 35
HC659_RS17430 3387388 .. 3387400 -  -3.5  -3.29252   GGGGAGTAAATAAAT                TTTTA TTT TAAAA                CTATTCTCACTTATC  48 293
HC659_RS17420 3384573 .. 3384617 -  -3.8  -5.04868   TGAAATGAAACAAAA CAAAAAAGACAA-GA-GTGGCA AGT TGCCAAACCATTGTCTTTCCTG TTGTTTGATTGGACG  72 132
HC659_RS17415 3383931 .. 3383952 - -11.7  -3.75115   TCTTCATAAAATCAA           GGCATATAC AGCT GTATATGCC            TTTGCCATTAAGCTT  91 33
HC659_RS17380 NONE
        racX 3375168 .. 3375193 -   -12  -5.82172   AGGAACATAAAAAAA         CAAGGACTGT TTGAAG ACAGTCCTTG          TCTGAAGCTAGCTTT 100 33
HC659_RS17370 NONE
        padC 3374058 .. 3374099 - -20.5  -4.76041   CATACTCAGCAAAAA GAAAACCCGGAAAAGAGAA GTAA TTCTCTTTTCCGGGTTTTT  ATGTTTATTATAATC 100 33
HC659_RS17345 NONE
        epsB 3370168 .. 3370186 -  -7.4  -3.10894   ACGACCAGCATCTAA             GGCAGC AACTTCA GCTGCC             CACAGCAGAGCCGAG  62 84
HC659_RS17335 NONE
HC659_RS17330 NONE
        epsE NONE
HC659_RS17320 NONE
        epsG NONE
HC659_RS17310 NONE
HC659_RS17305 NONE
HC659_RS17300 NONE
HC659_RS17295 NONE
HC659_RS17290 NONE
HC659_RS17285 NONE
HC659_RS17280 NONE
HC659_RS17275 3355890 .. 3355916 - -11.7  -4.80487   GAGAATCAAAATAAA        CCTTCC-GCTCA CATG TGAGCAGGAAGG         TTTTCCTTCTTTGAG 100 7
        rpoN 3354260 .. 3354278 - -10.3  -5.41143   GATTCCTTAAAAAAA             TCCTCCC GTCTA GGGAGGA             TTTTATTTATATCGC 100 28
        lutR 3351537 .. 3351560 -  -9.6  -4.65895   TGCCTCATGTAAAAA          GACTGAACCA TTTG CGGCTCAGTC           TCAGTTGTTCGTATC  91 78
        ganR 3350416 .. 3350435 -  -9.4  -5.65927   TACCTAAATAAAAAA            TGACTTAG TGTC CTAAGTCA             TCCTTAATTCATACT 100 29
        ganS NONE
        ganP NONE
        ganQ NONE
        ganA 3344773 .. 3344791 -  -8.8  -4.77122   CTATAGAAAAAAGAA             TCCGCCCA TAT CGAGCGGA             GCATCAGCCTAATGT 100 34
        ganB 3343374 .. 3343417 -  -9.8  -5.10933   TGATGTAAAATAAAA TGATCCATGAGACATAACAA TGAT TTGTTACATCTCATGGATTT TTTTGTTTCAGCGTT 100 33
HC659_RS17210 NONE
HC659_RS17205 NONE
        yvfT 3338243 .. 3338262 -  -3.6  -3.72374   CCTCAGCAATAAACA            GACGAA TCATTCTT TTCGTC             CTCCAATCATTCTGC  54 32
        yvfU 3337618 .. 3337639 -  -8.7   -4.8048   GTGGCATATCAAAAA           CACTCCCGA TCTC CCAGGAGTG            CAGTATATGGTTAGA 100 36
        lutA NONE
        lutB NONE
HC659_RS17180 3334540 .. 3334561 -   -13   -4.8622   TTTTTCAAGCAAAAA           GCCCGGCA TATGCC TGCCGGGC            TTCCTGAGTTCAGCG 100 35
HC659_RS17175 3333067 .. 3333111 - -10.9  -5.93252   TTCAAAAACAAAAAA GCCCGCCGTCTC-CTACCTA ATCTAA TAGATAAAGAGACGACGAGC CTTCGGCTGACCGCG 100 343
HC659_RS17170 3331650 .. 3331675 - -19.1  -5.34365   GCACAATAATAAAAA         CCCTCTTGCCG GATG CGGCAAGAGGG          TTTCTTATTTACTGA 100 34
HC659_RS17160 3329698 .. 3329718 -  -4.1  -4.72497   CATTCAGGAATAAAA            GAATTTGAT TCG ATGAAATTC            GAACAATGTAAAACG  69 55
HC659_RS17155 3328538 .. 3328566 -  -6.8  -5.87996   GAATGAATAAAAAAA       GCAATGTA-TGGG TCTC CCCGCTACATTGC        TTTTTTTATAGCTGT  93 40
        araE 3325806 .. 3325829 - -13.2  -4.20368   GCATCCCAATATAAA          CAGCCCTTCC CGTA GAAAGGGCTG           TTTCATTAAAGCGTT 100 42
        cggR NONE
         gap 3323382 .. 3323406 - -12.2  -4.65895   GTCTTCATGGAAAAA          GGGAAAGGGA GTCCG TCCCCTTCCC          TTGTCCGCTTTCATT 100 91
HC659_RS17130 NONE
HC659_RS17125 NONE
        gpmI NONE
         eno 3318297 .. 3318321 -  -9.2  -5.42265   TGAAAGCATAAAAAA          GCCGCCGAGA GAAAA TCCCGGCGGT          CTTTTTATTACTTGT 100 33
HC659_RS17105 3315848 .. 3315877 - -20.9  -4.56775   ATGCTCTTTTAAAAA       CAACCCCATCACC TGCT GGTGATGGGGTTG        TTTTATTGAATAGAC 100 28
HC659_RS17090 3313577 .. 3313610 -  -8.2  -5.07652   GTGCCGAAAACAAAA     GAATGCAGCTCTCT AAAATA AGAGAGCTGCTTTT      TGCATCATGAAGTTA 100 30
HC659_RS17080 NONE
       opuCB NONE
HC659_RS17070 NONE
       opuCD 3309305 .. 3309333 -  -7.5  -5.47218   GTTTATTTAAAAAAA        CCACCTCTGTT GTATTTA AATAGAGGTGG        TTTTTCTATCAGCTA 100 12
        sdpR NONE
        sdpI 3308176 .. 3308203 - -18.6  -2.61727   ATCCATTATAATTGA        GTGTCTTGCGGA TTGC TCCGCAAGACAC         TTTTTCAACGTGAAC 100 30
HC659_RS17030 NONE
       opuBB NONE
HC659_RS17020 NONE
       opuBD 3301551 .. 3301569 - -14.6  -5.56264   TTTAAAGAGAAAAAA             GAGGCTGG ACT CCAGCCTC             TTTTTCTATTCTATG 100 36
HC659_RS16990 3298027 .. 3298043 -  -3.5   -4.7219   CATAGGAATAGAAAA              CGCTTGG CTT CCTTGCG              TTTTTTGTTACTTTA  67 38
        secG 3296799 .. 3296822 -    -4  -5.71983   TTAATCAGAAAAAAA          CGTTT-TGAAT ATC ATCCAGAAACG          TGAAAAAGGCCTGAC  85 70
HC659_RS16975 NONE
         rnr 3293598 .. 3293625 - -10.7  -4.41348   TGTTTCCGAAAGAAA        GCAAATAGAGC GCTGCG GCCCTATTTGC         TGGTTGAGCTGCTAT  95 37
        smpB 3292987 .. 3293019 -  -8.6  -2.92175   CGTGAACACAGTATA     GCACAG-GCCTGATT TTCG AATCAAGCACTATGC      CTTTAGAAGCCTTTT  69 28
        ssrA 3292441 .. 3292472 -   -19  -5.24129   GGTTTGGAGAAAAAA      TAAAGCAGAACCTC TTAA GAGGTTCTGCTTTA       TTGTCAGTATGTATG 100 36
HC659_RS16955 3291486 .. 3291504 - -10.3  -5.48787   ACAATATATAAAAAA             CCTCTCC TGTTG GGAGAGG             TTTAAAAGACACTGC 100 27
HC659_RS16950 NONE
HC659_RS16945 NONE
HC659_RS16940 3290013 .. 3290033 -  -6.9  -5.67063   CGCACGATAAAAAAA            CAGAGAC TTATACC GTCTCTG            CTTCATTACATCAGT 100 62
HC659_RS16935 3287957 .. 3287972 -  -4.8  -4.74787   ATAAAGACAAAGAAA              TTTACT TTCA AGTAAA               ATATCTCGAATTAAA  74 65
HC659_RS16930 3287183 .. 3287214 - -13.1  -4.71426   GCTGGAGCAATAAAA      CAAAAGCCTCCCC AAATAA GGGGAGGCTTTTT       CATTAGAATGTTTTT 100 28
        csoR 3285640 .. 3285650 -  -4.6  -2.79796   TTTCATCCTACCATA                 CCCC CGT AGGG                 TATTACAATAAAAAA  48 46
        copZ 3285353 .. 3285378 - -13.4  -4.71307   TAAAAATGAAAGAAA         TATCGCGCCT CCCTAT AGGCGCGATA          CCTTGAATCACTCAG 100 33
HC659_RS16910 3282866 .. 3282892 -  -9.5  -4.86621   AGTGTCAATGAAAAA         CAAAAACCGGC ATATA GCCGGTTTTTC         ATTTTACTTTTTGCA 100 24
        cadA 3280535 .. 3280560 -  -7.6  -5.46698   TTTAAAATTAAAAAA         GAAGCGGATC GCAATT GACCCACTTC          TTTATTTTAACAAGA 100 88
        bdbD NONE
HC659_RS16895 3279385 .. 3279405 - -11.1  -5.37593   TGCGAAATTAAAAAA            GCGCCCG GCATACG CGGGCGC            TTTTTTTGTTATTCA 100 34
HC659_RS16890 3278587 .. 3278613 - -15.3  -4.46926   CAGGCTACCATAAAA         GAAACCTCTCC GTCAT GGAGAGGTTTC         TTTTATTTTACTGAC 100 33
        helD 3275164 .. 3275181 -  -9.9  -5.56264   TGTAAATAGAAAAAA             GAGAAGG ACTC CCTTCTC              TTCATTCAGCCATCT 100 27
HC659_RS16875 3273208 .. 3273218 -  -6.8   -2.7709   AATCAATATACATCA                 CGCT GAT AGCG                 TTTTTGCTGCTGCAT  58 2
        cysI 3271416 .. 3271440 - -15.1  -5.43487   AAATTACAGAAAAAA          GAGACAGGAAG CTA CTCCCTGTCTC          TCATCTTTCTTTCTC 100 39
HC659_RS16865 3269154 .. 3269173 - -11.4  -5.80817   CTTAATATAAAAAAA            GCTGGCGC TCTA ACGCCAGC             TTTTTTGCTGCATTT 100 39
        pgoN 3267580 .. 3267596 - -10.1  -5.54894   AACGCACTAAAAAAA              CTCCCCA TAA CGGGGAG              TTTTTTGATTAAAAC 100 34
HC659_RS16840 3265070 .. 3265087 -  -9.9   -5.7946   TTCCGAATAAAAAAA             TCCCTCT ATCA AGAGGGA              TTTTTTACGTTTCCA 100 30
        sspJ 3262290 .. 3262316 -   -16  -4.28375   GGAACAGATGGAAAA         TACGGATAGAGC CAA GCTCTATCCGCA         TGTGGTTATCGATTA 100 31
HC659_RS16820 3260484 .. 3260506 - -12.1  -5.26316   TGATTTTATAAAAAA           GACACCTGA GCAAA TCAGGTGTC           TTTTCATTATGCTTG 100 32
HC659_RS16810 NONE
HC659_RS16805 3257046 .. 3257057 -    -3  -2.57132   TGTTCCGTTGATAAT                GAAT TCAT ATTC                 GGCCCCCTCCTCTAA  41 37
HC659_RS16800 3256220 .. 3256238 -   -11  -6.09888   GCCGAATAAAAAAAA             TCCCGGCT TCG AACCGGGA             TTTTTTCATACAGTA 100 31
HC659_RS16795 NONE
HC659_RS16790 NONE
HC659_RS16785 3252957 .. 3252981 -  -9.4  -5.47218   TCCCAGCTAAAAAAA         GAACGCATTCC AATT GGA-TGCGTTC          TTTTTATTCATAGCG 100 29
        sigO NONE
        rsoA 3250030 .. 3250047 -  -4.8  -5.36314   CAAAACAGCAAAAAA             GGAGCA AACAAG CGCTCC              CTTTTGATGTTTTTT  84 53
        yvrH NONE
        yvrG NONE
HC659_RS16745 3246494 .. 3246514 - -12.6   -5.9873   GTAGTATAAAAAAAA            CGCATCCG TGTTT CGGATGCG            TTTTTTTTATACGTC 100 32
HC659_RS16735 NONE
HC659_RS16730 NONE
HC659_RS16725 NONE
HC659_RS16720 3241352 .. 3241377 - -12.6  -5.63236   AGTGAAAAACAAAAA         GCCGGCATGT ATTTGA ACACGCCGGC          TTTCGTTTTCACTTT 100 47
HC659_RS16715 3239917 .. 3239937 - -12.6  -5.61596   ATCGGCACAAAAAAA            CGCCATGC ACGAG GCATGGCG            TTTTAAAACCCTTTA 100 38
        liaI NONE
HC659_RS16705 3238673 .. 3238690 -  -6.3  -3.17194   ACGTGCGGAAGGGAA             GGACTTG ACCG CAAATCC              TTCCCCGTTCCGCTT  58 39
HC659_RS16700 NONE
        liaF NONE
        liaS NONE
        liaR 3235245 .. 3235257 -  -4.1  -2.88544   TGTGATTGTCAGAGA                CTTCG GAA CGAAA                GGCGCAAACAAATAG  46 48
HC659_RS16665 NONE
        fumC 3229845 .. 3229871 - -19.6  -3.42583   GCAACATATTTAGAA         GAACGGCTGCTT AAA AAGCAGCCGTTC         TTTCTTACTATTACG 100 36
HC659_RS16650 3228132 .. 3228142 -  -2.6  -5.61596   AGCTGGAGAAAAAAA                 TAAA GGA TTTA                 TTATATTTAACGAAG  89 518
        htrB 3224888 .. 3224910 -  -9.2  -5.46657   TAGGGTAACAAAAAA           GCTGAACC TTAATCG GGTTCAGC           TTTTTGTTTTTTCTT 100 39
HC659_RS16620 3221527 .. 3221549 - -11.2  -4.82333   AGAAGAATTGAAAAA           GCCGGGGCAT TTA ACGCCACGGC           TTTTTCTTTAAGATT 100 33
HC659_RS16615 3220941 .. 3220955 -  -3.6  -2.90028   TGTAGCAGAAAACAC               TGACTT TGA AAATCA               TTTTCAATTAGTTTT  46 80
HC659_RS16610 3219922 .. 3219958 - -14.7  -5.75342   TCCTTTCAAAAAAAA   CAGC-AAGGAGCTTTC TCAATT GAAAGCTCCTTCGCTG    CGTTATTTATCCATG 100 32
HC659_RS16605 3219619 .. 3219644 -    -7  -5.37345   CTGAATCACAAAAAA         GCAGTCTGCTA TAATG TA-CAGACTGC         TTTTTGGCTATTGTT  95 33
HC659_RS16595 NONE
HC659_RS16590 3217441 .. 3217464 - -13.8  -2.77148   CCCATTAATAGAGCA          CCCCGCGGGT ATCA ATCCGCGGGG           TTTTTTATTCAATCA 100 30
HC659_RS16565 3213569 .. 3213589 -  -8.2  -2.76171   TGGAACAATCATAAT            GCAGCTGC TTCCC GCGGCTGC            TTTCACTTTTTCAAA  66 28
HC659_RS16555 NONE
HC659_RS16550 NONE
        fadE 3207861 .. 3207882 - -15.9  -5.00616   GTGCTTCTTAAAAAA           GAGCTCCGC GCAT GCGGAGCTC            ATGGCCAATCAGACA 100 34
HC659_RS16540 NONE
        gcvH 3206918 .. 3206935 -  -2.7  -2.64155   GTTTGTCGAAAGCCA             TATTGGA CACC TCCCATA              ACGTTAGCGTGTCCA  41 64
HC659_RS16530 3206659 .. 3206677 -   -11  -4.20817   CAGATTGTAAAAGAA             GGCAGTGA AAT TCACCGCC             AACATTAACACCAGC  90 30
HC659_RS16525 NONE
HC659_RS16520 3205891 .. 3205901 -    -4   -2.9652   TTATAAAACGAACGA                 CAAT TTC ATTG                 GATATGCTGAGAAAT  47 44
HC659_RS16515 3205203 .. 3205230 - -14.2  -5.07652   TTCTGCAAAAGAAAA        GCCTTTCTGCAC ACTT GAGCAGAAAGGC         TTATATAAAATGCCT 100 264
HC659_RS16510 NONE
        metP NONE
        metQ 3202537 .. 3202581 - -20.3  -4.12902   CAATCACGCTGAAAA GATGACAAAGCCCTAAAACGA ATA TCGTTTTAGGGCTTTGTCAAT AATTGAACCCCGGAA 100 62
HC659_RS16495 3201902 .. 3201917 -    -4  -2.85668   TAGCGGCAGATGAGA              CGAAAG CATC CTTTCA               GAACAAATGAGAATG  46 63
HC659_RS16490 3201587 .. 3201602 -  -6.8  -5.63236   ATTGAAAAAGAAAAA              GAGTGG ATTC CCACCC               TTTTTTAAAAGATTG  93 47
        sufC NONE
        sufD NONE
        sufS NONE
        sufU NONE
        sufB 3196135 .. 3196161 - -16.8  -5.26119   CTCTGAAAAATAAAA         GAAGACGAACTT CAA AAGTTCGTCTTC         TACAATCAAATTCGG 100 107
HC659_RS16460 3195615 .. 3195628 -  -2.4  -3.43071   TTCGATATGAATGAA               GCAT GGTACT ATGC                TAACAATCTGGCTAC  45 92
        glxB 3195142 .. 3195162 - -10.4  -5.31545   AAGAAGAGTAAAAAA           CCGC-GGCC CCTC GGCCAGCGG            TTTTTCTTCTGCATA 100 64
HC659_RS16440 3193396 .. 3193406 -  -3.2  -5.24647   ATACAGAAAAGAAAA                 GCTA GAA CAGC                 TTTATTATATTTGTT  73 58
HC659_RS16435 3192909 .. 3192933 - -10.8  -4.55128   ATGCCCAAATCAAAA          GCCAGAACTT GACTT AAGCTCTGGC          TTCGCTGTTCAATCC  95 54
HC659_RS16430 3191704 .. 3191731 -   -13  -2.62184   CTCCTCTGGACATTA        GACTATAATGTT ATAT AACATTATAGTC         TAATGCATAATGGTT  85 54
HC659_RS16425 3190379 .. 3190404 -  -7.7  -4.82901   TCTCCTTTATAAAAA         GAAAAGGTG CGAAGCTT CACCTTTTC          TTTGATTTATTCAGC  88 32
HC659_RS16420 NONE
HC659_RS16415 NONE
HC659_RS16410 3187309 .. 3187334 -  -2.5  -3.66666   CCGAAAAGCTTCAAA         TCCAACCCGAG AGCC CTGTGGTTGAA          TTAAAACGGATTTTA  50 392
        ugpC 3185636 .. 3185657 - -14.5  -5.06414   TGGCCGTAAGAAAAA           GGTGCTCCT TTTG AGGAGCACC            TTTTTCTAATACACA 100 31
        allC NONE
        pucG 3181793 .. 3181812 - -13.6  -4.61231   TCATATCGTTAAAAA            GCTTGCGG AGTT CCGCAAGC             TTTTCTTTACACCGC 100 32
HC659_RS16375 NONE
        pucB NONE
        pucC NONE
        pucD NONE
        pucE 3176395 .. 3176416 - -14.5  -5.05782   ACTGAGGCTAAAAAA           GTCCGGCTT TTAA AAGCCGGAC            TCCCGTCTACCCCCG 100 13
HC659_RS16320 3167877 .. 3167898 - -14.4  -5.40004   GAGGAAATCAAAAAA           CCCGGCGG TAAAAT CCGCCGGG            CTTACGAAGGAACGA 100 27
HC659_RS16315 NONE
HC659_RS16310 3166580 .. 3166593 -  -2.3  -4.64861   CTTTTCTAAAATAAA               TCGAG CTGT CTCGG                AGCAAGTCCGCTGTA  61 2
HC659_RS16305 NONE
HC659_RS16300 3164267 .. 3164299 -  -2.1  -2.74012   TTACCACGTCAACCA     CTCCCTTCATTCAT CACTTT ATG-ATGAAGGGCA      CAGCTTGTTGTGGGC  40 49
HC659_RS16295 3163886 .. 3163925 - -10.2  -4.63486   ATCTTGGCAAGAAAA  TCCCCCCTTACATATCACA ATG TATGCT-TGTAAGAGGGGA  CATAGTAATAGCCGG  91 53
        yunB 3163082 .. 3163129 -  -8.6  -5.63374   TGAATACCAAAAAAA GAAGTAACAAA-AAGCCGCCTCT TCA ACAGGCGGCTTATTTGCTGCTTT TTTCTTTTTTTGAAT 100 12
        lipA 3160946 .. 3160974 - -14.7  -2.82291   AATCGATAGGAATGA        CAAAAACGCCAGA TGA TCTGGCGTTTTGG        CATTATGCTTGGGCT 100 28
HC659_RS16270 NONE
HC659_RS16265 NONE
        nucF 3158657 .. 3158677 - -14.7  -3.92996   CGGCATACAGAATAA            GGGCACCCT TTT AGGGCGCCC            TTTTTTCAAATGTAT 100 31
       cotNH 3156892 .. 3156904 -  -4.8  -3.21276   CCTGTTTTGACAAGA                CAGC ATTAG GCTG                AATTTTGCGAATGTA  53 105
HC659_RS16245 NONE
HC659_RS16240 NONE
HC659_RS16235 3153461 .. 3153487 -  -6.5  -5.52384   TCTCCAGCAAAAAAA        GCGC-CCTCCGC TGAC GCTGAGGAACGC         TTGGCATGATCTATA  93 36
HC659_RS16230 3151383 .. 3151409 - -12.3  -3.10244   TCTTTTAATAAAGCA         GCCAGGCGGAT ATTTG ATCAGCCTGGC         TTTTTTTATTAGAGA  85 34
HC659_RS16220 3150602 .. 3150620 - -10.3   -3.9467   AATGATAGAGAAGAA             CCGCTGA TCAAG TCAGCGG             TTTTCTGTATACCCA  88 19
HC659_RS16210 3149000 .. 3149015 - -10.4  -5.79595   CGGCAAAATAAAAAA              GGGCCT GTCC AGGCCC               TTTTCTTTAAAACAT 100 32
HC659_RS16205 3147633 .. 3147666 - -17.7  -2.87132   CCCGTTTTTCATACA     TAAAAGCTCCTTGCA CTGA CGCAAGGAGCTTTTA      TCGTTTATATAAACA 100 30
HC659_RS16200 NONE
HC659_RS16195 3146186 .. 3146222 -   -11  -5.18726   TCCCCATAATAAAAA    CGCCTCCCTTAACGAT GATTT ATCGCTAAGAAAAGCG    TCAGTAATAGTTGCT 100 56
        paiA NONE
        paiB 3144686 .. 3144718 - -18.6  -5.71983   TTAATCATAAAAAAA     CGCCAAGTC-AGCGG TTCT CCGCTTGACTTGGCG      TTTTCTGCTACTTCT 100 55
HC659_RS16175 3143245 .. 3143270 - -12.7  -6.01369   TAAATAATAAAAAAA         GGAGCTTGTGTC TGC GACACA-GCTCC         TTTTTTATTTGAAGA 100 30
HC659_RS16165 3140669 .. 3140682 -  -9.5  -5.09762   TTTTAATAAAGAAAA               CCCGC TTCC GCGGG                TTTTTAGAAAAACTT 100 29
HC659_RS16160 3140320 .. 3140363 -  -3.3  -2.61484   AGACTAATCAACCTA TTCCACCCCCTCTGCGTTGC TTTTAGT GTAACGC-G-GG-GGTGGAA ATAAAGTCAACGTCT  43 32
HC659_RS16155 3139971 .. 3139989 -  -7.5  -5.80248   GAACATACAAAAAAA             GCTTTCT ATAGA AGAAAGC             GGCAGTTAAAACATT 100 31
        spsC 3139212 .. 3139233 - -11.5  -5.47218   TTTCATGTAAAAAAA           CGCTCCTGC TTTC GCTGGAGCG            TTTTATTCTTTCACA 100 28
HC659_RS16140 3137038 .. 3137062 -  -7.1   -5.4505   TTTCGGAAGAAAAAA          TTCCTGCCGCA TCA TACAGCAGGGA          TTTTTCATTACTCGT 100 33
HC659_RS16135 3135567 .. 3135588 -   -13  -4.59069   ATCATAACGAGAAAA           GGCTCCCC AGTAAA GGGGAGCC            TTTTTCCTATAAAAC 100 32
HC659_RS16125 3134136 .. 3134159 -  -5.4   -5.4505   TTCCCGAATAAAAAA          GGCACCTTGAT CAA AT-AAGGTACC          TGCAGACTATCAATA  88 92
        besA 3133130 .. 3133148 - -10.3  -3.27704   ATTTTTTAAAGGCAA             GGCTGAG TATGT CTCAGCC             CATTGAAAGATGCGG  79 20
HC659_RS16115 NONE
        dhbC NONE
HC659_RS16105 NONE
HC659_RS16100 3128340 .. 3128352 -  -2.6   -3.0353   CCTTTTATAAATAAT                CCGC GTTTG GCAG                CACTTGCTGGCTGCG  43 2
        dhbF NONE
HC659_RS16090 3120915 .. 3120935 - -11.2  -5.10064   CGTAAGATAGAAAAA            GAGACTGC GGCAA GCAGTCTC            TTTTTGATACGATTA 100 38
HC659_RS16070 3116744 .. 3116781 -  -9.1  -2.88861   GATCACCCTTACATA   GAAAGAGCGCCGTCTTC TTTT GAATCAGGCGCTCCTTC    CCTTTCATACTGTTA  69 38
        yukD NONE
        essB 3115057 .. 3115067 -  -2.4  -2.85985   ATAATAGACTCAAAT                 GGCG AAC CCCC                 TTACGGCCGAATGGC  41 73
        essC NONE
        esaA 3107294 .. 3107330 -   -11  -3.16088   AGAGGGTATGAAAAG    GGAAAAGGAGAGCATA CAAAT CATGATCCCCTTTTCC    ATGCTGCGATTACGC  80 35
        essA 3106784 .. 3106797 -  -3.1  -4.08706   CGGTGATGATATAAA               GTTCC ATTG GAAAC                CTCCTTTTCCGTTAT  57 81
HC659_RS16040 3106041 .. 3106059 -  -8.9  -5.93809   TTTGTATAAAAAAAA             GAGCAGA AAATA TCTGCTC             TACAAAAACTCTTTA 100 25
HC659_RS16035 3105214 .. 3105225 -  -5.8  -2.97245   TTATGGATAATGACA                CAGG CTTA CCTG                 ATAAAACAAAGGGGT  56 131
HC659_RS16030 3104876 .. 3104898 -  -2.7  -4.74103   CGCTTAACTGAAAAA          TAGGACGTCC CGGT GTACG-CCTA           TTTTTCATGCGCAAG  65 46
HC659_RS16020 NONE
HC659_RS16015 3102959 .. 3102987 - -13.3  -5.60689   TTATACAATAAAAAA        GCAACAGCCTCTT GTG AAAAGGCTGTTAC        CCGTTAAACGAAACT 100 22
HC659_RS16010 NONE
HC659_RS16005 3102172 .. 3102190 - -11.8   -5.1356   TGCCATGAACAAAAA             GACAAACG GTC CGTTTGTC             TCTTAAGATTTCAGC 100 28
HC659_RS16000 NONE
HC659_RS15995 3100015 .. 3100059 - -14.7  -3.17888   AAAATAATATATACA TAAAGAAAA-CTGGCCCTTC GCGAAT GAAAGGCCAGTTTTTCTTTA TTCTTCCTCAAGCTC 100 23
        pdeH 3098252 .. 3098275 -  -4.5   -4.7889   ACAAACACCGAAAAA          GACCGCAAC GCTAAA GTTGTGGCC           TTTTCGCTTTGTCAT  71 441
        degQ 3097726 .. 3097741 -  -7.6  -5.98781   TAGAACGAAAAAAAA              GACTTG TTTC CAAGTC               TTTTTCACGAAATTT 100 30
HC659_RS15970 NONE
        comX NONE
HC659_RS15960 3094109 .. 3094128 - -12.2  -5.26316   CCATTTTATAAAAAA            GACTTGGC CTGT GCCAAGTC             GTTTCCGTTATAAAT 100 44
HC659_RS15950 3092991 .. 3093016 -  -7.6  -3.31603   ATTTATAAAAATAAG         CAGCCGGA CAGGCAGAGT TCCGGCTG          TTTTTTTATTTCTTG  67 31
HC659_RS15910 3086741 .. 3086763 -  -9.2  -4.40003   CTTCATAAACAGAAA           GAGTTCCG TTTTATG CGGAACTC           TTTTTTTATTTATTC  91 31
HC659_RS15870 3077027 .. 3077054 - -17.2  -3.64682   CACCAAACGCTGAAA        TGGCTAGCTTAC ACAG GTAAGCTAGCCA         TTATGCTATTATAAA 100 6
HC659_RS15850 3073077 .. 3073088 -    -3  -2.56122   TCCGATCAGAAAATG                CTAT CTTT ATAG                 TATATCAATTCCCCT  41 54
        kapD 3071921 .. 3071934 -  -2.3  -4.58663   AGCAGCTTCCAAAAA               GGCAC TACG GTGAC                CATTAAGCTTCCCGC  61 515
HC659_RS15825 3069013 .. 3069045 - -15.2  -3.16564   TGCTGATTTTATCAA      TTAAAAAAACCGGT GCTGA ACCGGTTTTTTTAA      GGCGTGCAGGAGCTG 100 22
HC659_RS15815 NONE
HC659_RS15810 3066307 .. 3066348 -  -3.7  -4.81551   TATGCACAGCAAAAA GGGGGTAAACTGAAAATACC AAA GGCTTTCT-AGTATTCCCCC CTTTTATTGGATGCG  69 63
        yugI 3065756 .. 3065779 - -13.2  -4.58773   TGCATGAAATCAAAA          GCACCGAACA TTCC TGTCCGGTGC           TTTTTTTCATGCTTA 100 38
HC659_RS15795 3064052 .. 3064077 -  -9.7   -5.8096   GACAAAAAAGAAAAA         GGGAAGCAGCC AAAC GGCTATTTCCC          CTTTTTTTATAGTGA 100 32
HC659_RS15790 3062777 .. 3062800 - -12.5   -4.4846   CAAGTCAAGAAGAAA          GGGCGGAAT GACTGG ATTCCGCCC           TTTGGGTTTATAGAG 100 33
HC659_RS15785 3061311 .. 3061334 - -12.4  -4.85599   CTGATTTTATAAAAA          GCCGACCGGC AAAT GCCAGTCAGC           TTTCTCACATTAATC 100 35
HC659_RS15780 NONE
HC659_RS15775 3060382 .. 3060409 -  -9.9  -4.84761   ATAGGCGTACAAAAA        GAGGAGGGG CCGATGATTT CCCCTCCTC         TTACATACAAGGTGC  91 66
HC659_RS15760 NONE
HC659_RS15755 3058071 .. 3058094 -  -9.6  -5.73672   AAATAAGCAAAAAAA          GCCCTTACCA TAAA TGGTAAGGGG           CCACCTCCTTAACGT 100 40
HC659_RS15750 3056748 .. 3056768 -  -5.4  -5.39721   TGATGACACAAAAAA            CAGCCG TTCGTTCCC CGGCTG            TTTTTTATTAAAAAT  86 33
HC659_RS15745 3054967 .. 3054985 -  -8.8  -6.14618   GATAAAACAAAAAAA             CTCCAGTC TAA GGCTGGAG             TTTAGCACCATAGAT 100 27
HC659_RS15740 NONE
HC659_RS15735 NONE
HC659_RS15730 3053948 .. 3053978 -  -6.1  -4.56775   ATCGTCCGCTAAAAA       GCCCCATCGCC TATTTTCCG GACGATGGGGT       TTCAAATGCCTTTCG  76 5
        mcpB 3051031 .. 3051049 - -10.3  -5.74122   TACCATATAAAAAAA             CAGCGCT TTGAT AGCGCTG             TTTTTCGGCTTTTAC 100 37
        tlpA NONE
        mcpA 3046750 .. 3046774 - -11.5  -6.11019   AAAAACTAAAAAAAA          CACCCAAGC GCAACAA GCTTGGGTG          TTAAGGCTTATTATT 100 36
        tlpB 3044651 .. 3044674 - -11.8   -5.4505   GTTTTCAACAAAAAA          GAAAGCAGCA GATA TGCCGCTTTC           TTGTTTTATTAAGAT 100 34
HC659_RS15700 NONE
        rhaR NONE
        rhaB NONE
        rhaM NONE
        rhaA 3038515 .. 3038542 -  -9.9  -5.47399   TCAAGCTTAAAAAAA       TCCGCCCGCGTGC AAAT GC-CGC-GGCGGA        TTTTTTATTAGACAA 100 33
HC659_RS15670 3036124 .. 3036136 -  -5.5  -3.48593   TATTTTTTTACATAA                CGGGA GCT TCCCA                TAAATGGAAAGCCCG  58 64
HC659_RS15665 3035221 .. 3035242 -  -8.8  -5.38951   AATTGACAGAAAAAA           TAAGGCTC GGAAAA GAGCCTTA            TTTTTCGACTTACAT 100 35
HC659_RS15660 3035045 .. 3035061 -  -9.5  -6.09196   CTCAAAACAAAAAAA              CCCTTAT CGA ATAAGGG              TTTAAAGGTATGGAG 100 34
HC659_RS15650 3032419 .. 3032451 - -10.9  -4.23434   GAAAAGATTGCAAAA      TAAAAACCTTTTC GCTCAAT GAAAAGGTTTTTA      CCATGTTTCTATTTT  90 34
        lytG 3031382 .. 3031415 -  -5.3  -2.72973   TTAAAAAGTGATAAC     TTCCGTGGAATATTA TACC TCAAATTCCCCGGAA      TGGAACAAAGAATTA  51 61
HC659_RS15640 3031055 .. 3031074 - -10.7  -5.58454   GTGATATCAAAAAAA            TCCGGCG TGCAGT CGCCGGA             TTTTTTATGATTCGA 100 30
        betB NONE
        gbsB 3024455 .. 3024477 - -10.6  -5.06451   CATTATCCCAAAAAA           TCCCGCTC TGTAAAG GAGCGGGA           TTTTGATTATACCGT 100 32
HC659_RS15605 3023792 .. 3023837 - -16.5  -4.28115   ATGAAAGAAATTAAA GAAAAGATAGAAAGGGCCTGAT TTA ATCAGACCCTTTCTG-CTTTTC GTTTGACTTTTCGCT 100 6
HC659_RS15595 NONE
        floT NONE
HC659_RS15585 3020511 .. 3020535 - -17.9   -5.0925   GCGTAAAAGTAAAAA          TCCCCCAGCGA ATT CCGCTGGGGGA          TTTTTCGTTATCTGT 100 33
HC659_RS15575 3017618 .. 3017643 - -11.3  -2.72371   GTTTTCAAAGAACAC         GTTTCGAAGGA ATGA TCCTTCAAAAC          TAAACAAGACAGGGA  78 88
HC659_RS15570 3014560 .. 3014577 -  -8.5  -4.49556   TCGCCACCAAACAAA             TTGAGAG TGTT CTCTCAA              AACTAGATAACAGGT  86 55
         rrf 3014422 .. 3014437 -  -7.6  -3.31322   GCTAATCCTCCATAA              TTGCAC TAAC GTGCAA               TTGCTTGGCGGCGTC  67 28
HC659_RS15560 NONE
HC659_RS15555 NONE
HC659_RS15550 NONE
HC659_RS15545 3014010 .. 3014038 -  -4.5  -3.09516   TGTTCTACCACTGAA        CTACTTCCGCA GAAATGG TGCGGATGAAG        GGACTTGAACCCCCA  50 12
HC659_RS15540 NONE
HC659_RS15535 3013845 .. 3013855 -  -2.4  -3.95435   GGGCGCAAAACATAA                 TGCC GAG GGCC                 GGACTTGAACCGGCA  51 15
HC659_RS15530 NONE
HC659_RS15525 NONE
HC659_RS15520 NONE
HC659_RS15515 NONE
HC659_RS15510 NONE
HC659_RS15505 NONE
HC659_RS15500 NONE
HC659_RS15495 NONE
HC659_RS15490 NONE
HC659_RS15485 3012923 .. 3012946 -  -2.4  -2.98493   TTTACCACTAAACTA          CACCCGCAATT TTT ATTTG-GGGCG          ATTGATGGGAATCGA  42 19
HC659_RS15480 NONE
HC659_RS15475 NONE
HC659_RS15470 NONE
HC659_RS15465 3012596 .. 3012608 -  -3.3   -2.8294   TATGGCGGAGAAGGA                GGGAT TTG AACCC                TCGCGCCGCTTACAC  44 0
HC659_RS15460 3012459 .. 3012477 -  -8.9  -6.28401   TAAAAAACAAAAAAA             CCTTGCA GGATA TGCAAGG             CTTCTGGATGACCCG 100 31
        glgB NONE
HC659_RS15450 NONE
        glgD NONE
        glgA NONE
HC659_RS15435 3004322 .. 3004335 -  -4.5   -5.7946   CTGTGAACAAAAAAA               GCCGT TTAT ACAGC                GGCTTTTTCACATCA  91 33
       cotSA NONE
        cotS NONE
HC659_RS15410 2999851 .. 2999872 -  -7.4  -5.30189   GAGAACATGAAAAAA           GGCATAAA TATGAC TTTATGCC            TTGCGCTTTACGGTT  95 19
HC659_RS15390 2995336 .. 2995352 -  -7.9  -3.06183   TCCACGCTGATTGAA              CCCCCGA TTA TTGGGGG              TTCTTTTCCGTTTTC  65 16
HC659_RS15380 2992899 .. 2992918 -  -7.2   -2.5664   GATGTAATGAGTAAT            CGG-GTTGA CTG TCAACGCCG            CTCACCTCCTAATGC  60 17
        menD NONE
        menH NONE
        menB 2989460 .. 2989486 -  -8.1  -5.10933   GTATTGAAAAGAAAA        CAGCTTG-GACC GCAA AGTCTCAAGCTG         TTGGTTTACTAAGTA 100 48
HC659_RS15360 NONE
        menC 2986741 .. 2986760 - -10.7  -5.72616   ATTTACATAAAAAAA            CCGGCTG GGTCAG CAGCCGG             TCCAAACGAGAAGGG 100 111
        mntA NONE
        mntB NONE
        mntC NONE
        mntD 2982673 .. 2982699 -   -11  -4.41494   GATTTGTAATTAAAA         GAAAGAGCTG CGTCAGC CAGCTCTTTC         TTTTTGCATGTTGAG  95 11
HC659_RS15315 2979566 .. 2979585 -  -4.2  -5.88565   GTCATAATAAAAAAA            GACAAACC CTCA GGCCTGCC             TTATTTCCCCATGTT  91 26
HC659_RS15310 2978817 .. 2978837 -  -5.5  -2.57192   ATGGAATCGAAGCGA            TTAAAACAC ATG GCGCTTTAA            AAGGCGGATGGCTGA  50 117
HC659_RS15300 2978066 .. 2978093 - -12.9  -5.26918   AGACGTCACAAAAAA        GACCTTTTTGC TTAAGC GCAAAAAGGTC         CTTTCTATTTTAGCC 100 35
HC659_RS15295 2977523 .. 2977541 -  -2.4  -3.42699   ATTGATCCACCACAA             GAAAATCA CTC TGATTCAC             ACAATCAATGATGAT  45 30
HC659_RS15285 2976802 .. 2976829 - -16.4  -5.38839   GATACAAAAAGAAAA        GCCGGACGTCTT TTTT AAGACATCCGGC         CGTTCTATTTTTGAA 100 42
HC659_RS15280 2976228 .. 2976242 -  -2.7  -3.53224   TACTTTTGCCGGAAA               GTGCG ACCGA CGCTC               TGGGCTTTATTATGA  48 59
        ytkD 2975569 .. 2975586 - -12.7  -5.39721   GGAGGACATAAAAAA             CCCGGCA CATG TGCCGGG              TTTTTTATTCAATCC 100 30
HC659_RS15255 NONE
HC659_RS15250 2971730 .. 2971753 - -15.4  -5.49579   GTATAAAAAACAAAA          GCCAAGAGCA ATTA TGCTCTTGGC           TTGTTTTAATTGACG 100 31
        metK 2968404 .. 2968424 - -11.2  -4.08285   GATAAAAAAGGGAAA            GCCGCTTA ACCAG TAAGCGGC            TATAAAATTATTCTC  89 33
        asnB 2966340 .. 2966384 -  -8.8   -5.0065   GATGGAGAAATAAAA GGATAACAACAAGGCTTTCGA CTAC TCGAAAGCCTTGTTGTC-TGT TACACAAAGATGACT 100 25
HC659_RS15230 2964828 .. 2964856 - -12.6  -2.96216   TTCTATGAGCACACA        CAAAAAGAGCCC ACTGG GAGCTCTTTTTG        TCAGCTGATATTTCG  88 26
        ytpA NONE
        tbcS 2962137 .. 2962161 -  -7.2  -5.81412   GCCATCGAAAAAAAA          GCTCAGATCA GCAAA TGATTTGAGC          TTTTTTCTTTGAGTT 100 8
HC659_RS15200 2960144 .. 2960165 - -14.5  -5.60993   TTTTTTACAAAAAAA           CGGACCCTT TTAA AAGGGTCCG            TTTTCCTACACATCA 100 31
HC659_RS15195 NONE
HC659_RS15190 NONE
HC659_RS15185 NONE
        ytrC NONE
HC659_RS15175 NONE
HC659_RS15170 NONE
        ytrF 2954557 .. 2954575 -   -16  -4.96848   TGCGCTATAGAAAAA             GCCGGCTG TCT CAGCCGGC             TCGTTCGCATTATAA 100 35
        bceR NONE
        bceS 2952780 .. 2952803 -  -9.6  -5.55001   GAACAAAAAAGAAAA          GCATGTGACA TTTT CGTCACACGC           TTATGACATGTTCAA 100 18
        bceA NONE
        bceB 2949974 .. 2949992 - -13.2   -5.4182   AACGATAAACAAAAA             GCTCCAGA ATG TCTGGAGC             TTTTTCTGTTTCACA 100 36
HC659_RS15135 2947810 .. 2947832 - -13.5  -3.59262   GTCGACACGCTGAAA           GATCCCGCT CACCC AGCGGGATC           TTTTATTATGAAGAG 100 31
HC659_RS15125 2945747 .. 2945775 - -10.3  -6.02546   CCAAACTAAAAAAAA        CTCCCTCATCCCT AAA AGGGACGAGAGAC        TTTCGTTTTCCCGCG 100 327
        leuS 2943206 .. 2943225 - -10.8  -5.53991   GACTGATGAAAAAAA            TCCCCTTT TGGC AAAGGGGA             TTTTTTCTAGGCTTA 100 38
HC659_RS15115 2942793 .. 2942814 - -10.2   -5.4659   GAATACAAATAAAAA           CTAGGGGA CCGCTC TCCCCTAG            TTTTTTGGTTTTGTT 100 22
HC659_RS15085 2936231 .. 2936253 - -10.7  -5.43974   AAAAGGAAACAAAAA           GACCGTTTT CACAT AAAACGGTC           TTTTTCGATTTCTTT 100 47
        bioW 2935289 .. 2935301 -  -6.3  -3.72576   CTTTTTTCTATCAAA                TCATG AGT CATGA                TCTTCCTCCCACTCT  63 13
        bioA NONE
        bioF NONE
        bioD NONE
        bioB 2931050 .. 2931082 - -11.5  -4.56597   CTTTCTGTTCAAAAA      TAAAAGCAATCGACA TCA CACCGATTGCTTTTA      TTGATTCTTTCAGCT  95 35
        bioI NONE
HC659_RS15050 2928977 .. 2929005 -    -9  -5.64321   ATAACAAAAGAAAAA        GAGCATAATCTT AGAAA ATGATTATGCTC        CGTTCTCCTCCTCGT 100 18
HC659_RS15045 NONE
HC659_RS15040 2926373 .. 2926397 -  -9.4  -5.12617   GAAGCATGTAAAAAA         CCCAAAACCGC TTGC GCG-TTTTGGG          TTTTTCCAACATTAT 100 37
HC659_RS15030 NONE
        rmgQ NONE
HC659_RS15020 NONE
HC659_RS15015 NONE
HC659_RS15010 2919215 .. 2919226 -  -4.4  -2.52464   TTCTCTCTCAATCTA                TTCC GTTT GGAA                 CAGCGTTATGATAGA  47 51
HC659_RS15005 2918973 .. 2918998 - -16.3   -5.5353   CATATTAACAAAAAA         GATCTTTCCGC GCCT GCGGAAAGATC          TTTTTATTTGCGATA 100 29
        murJ 2914096 .. 2914112 - -10.1  -4.77173   CCTTTATAAAAGAAA              GCCCGCA GCA TGCGAGC              CCTCAGTTTCATCAT 100 51
HC659_RS14985 2913323 .. 2913343 - -12.6  -4.99043   TGCTTATAAATAAAA            CCCCGCAT TCGGT ATGCGGGG            TTTTTGTCATGCTTG 100 32
HC659_RS14975 NONE
HC659_RS14970 2910829 .. 2910848 - -12.2  -5.04597   ATGCATACAGAAAAA            CCCAAACG TCGC CGTTTGGG             TTTTTTATGTAAACA 100 30
        pepV 2908000 .. 2908025 - -13.3  -5.47821   ATTTATTTAAAAAAA         GGACTGGCTTC AGCA GAAGCCGGTCC          TTTTATTTTGCAAGC 100 28
        thpR NONE
HC659_RS14945 NONE
HC659_RS14940 NONE
        pulA 2902187 .. 2902226 -  -2.3  -5.98675   TATAAAAATAAAAAA  GACAGCTATTGA-GAG TCTCATATG CTAATCAATAGCCGTC  CTTTAAATTTTAGCG  87 58
HC659_RS14930 2900907 .. 2900931 -  -3.5    -5.626   GAGCGCATAAAAAAA          GAGGGTCCC GTCTGCT GGAACACTC          CTTTCACATGTATAA  84 376
        trmB 2900132 .. 2900151 -  -8.6  -5.93809   GGCCCATAAAAAAAA            CAGACTCC TGTC AGAGTCTG             TCTTTACGTTCTCCA 100 29
HC659_RS14915 2899228 .. 2899239 -    -3  -3.61922   AACATGCAGGGTAAA                CATA AAAA TATG                 CTATTGCTTCATTCG  48 26
HC659_RS14910 2897423 .. 2897451 -  -9.6  -5.32944   CGGACAAGCAAAAAA       TAGAAGCCGCTGC CTAC GCAGCGGCT-CTT        TTTTATTATATCGCG 100 31
HC659_RS14900 2895808 .. 2895843 -  -4.7  -5.68489   CAGAATAAGAAAAAA    GCTTGTCGATCCGGGC TTACT GCTCGT-TCAACAAGC    TTTTATGAAACCTAC  88 37
HC659_RS14890 NONE
HC659_RS14885 NONE
HC659_RS14880 2893960 .. 2893974 -  -2.2  -2.59323   AAAAGCGTTCATAAG               TAAAAA TCC TTTCTA               ATCCTTTTTCGGACG  40 23
HC659_RS14875 2893287 .. 2893310 - -13.2  -4.59944   ATCAGCAGAAACAAA          GCCGCTAAAC AAGG GCTTAGCGGC           TTTTCACATGATTCG 100 66
        sftA 2890162 .. 2890176 -  -3.4  -4.07568   CGCGGCGGCTGAAAA               GCCTCC CTT AGCGGC               GTATTTTATATGTTT  57 182
HC659_RS14865 2888757 .. 2888784 - -14.4  -4.08706   TTTCCATCAGATAAA        TAAAAAGCAGTG AGAT CACTGCTTTTTA         TTATGCCATGACGTT 100 26
HC659_RS14860 NONE
HC659_RS14855 NONE
        ytxJ 2887337 .. 2887358 -  -9.5  -5.93809   TTTTTACAAAAAAAA           GCG-CCAGAT GAT ATCTGGACGC           TTTTTTCTATGACAA 100 32
HC659_RS14845 2886022 .. 2886037 - -11.8  -5.75599   GAAAGCATAAAAAAA              GGCCGC AGGC GCGGCC               TTTTGGATTGTTCAA 100 41
        ccpA 2884731 .. 2884760 -  -5.8  -5.14563   CTCCCCATGAAAAAA       GCAAGAATTCACC ATAAA GGTGAAG-CTTGC       TCTTTGTTTTTCTTA  83 38
        motP NONE
        motB 2883168 .. 2883187 -  -6.4  -5.46129   GAACAAAGTAAAAAA            CGACCTTT ACGA AGAGGTCG             TTTTTGATTTTTTAA  93 12
        acsA 2878514 .. 2878539 - -15.5  -5.85244   AATTAAAATAAAAAA         CGCCCCTTCGT TTAC ACGAAGGGACG          ATTGATTATCGCGGT 100 307
HC659_RS14805 2877177 .. 2877204 - -14.3  -5.27335   TGCGGTAAACAAAAA        GATCCTTTGCC TTCAGT GGCAAAGGATC         TTTTTCTTATTTATA 100 32
HC659_RS14795 NONE
HC659_RS14790 2874265 .. 2874289 - -10.1  -4.70583   CGCAGTAATATAAAA          GCCCAAAAC TGATATC GTTTTGGGC          TTTTTTTATTTTATT  91 31
        refZ 2872629 .. 2872640 -  -5.8  -3.37487   GCATACCTTCAAAGA                GCTG ATTT CAGC                 CTGCGGAAGCATTGA  56 401
        ezrA 2870243 .. 2870264 -   -13  -3.52192   GTTAATGTCACAGAA           CGCCTGCG TTATTG CGCAGGCG            TTTTGCAATGAAAAA  95 89
HC659_RS14760 NONE
        thiI 2866280 .. 2866293 -  -5.3  -3.54475   CTTGTGAGTATAGAA               TGTGT CAAA ACACA                TGGCTTCATTCAGAA  58 78
HC659_RS14750 2865998 .. 2866017 - -13.6  -5.25735   GTAAAAAATGAAAAA            GAGTGGGG ATAC CCCCACTC             CTAAGCCATTATGTG 100 51
HC659_RS14745 NONE
HC659_RS14740 2862639 .. 2862668 - -18.1  -4.52589   CTTTTTTATAGAAAA       TAAAAGGACAGGC TAAT GCCTGTCCTTTTA        TGATTTCTCATATAC 100 23
        sppA NONE
HC659_RS14725 2860102 .. 2860126 -  -9.4  -5.43866   CAATTCCTAAAAAAA         TAAACCCGGAC GGAG GTCCGGG-TTA          TCGGTTATTTGCGGT 100 30
HC659_RS14720 NONE
        ytfJ 2858876 .. 2858900 -   -13  -5.78622   TTATGCCAAAAAAAA          GTTAACTGCG GCCAG CGCAGTTAAC          TTTTTTTTAATAATT 100 32
         tpx 2858261 .. 2858281 -    -9  -5.14563   CTTGCCATGAAAAAA           GCTCC-GGC GGCA GCCTGGAGC            TTTTTTCCCTGCTTA 100 38
HC659_RS14705 NONE
HC659_RS14700 2856967 .. 2856979 -  -2.7  -3.25073   CGGTGAATATCAACA                TCTTC TCC GAAAA                ATATCTGACTTTTCC  45 115
HC659_RS14695 2855678 .. 2855697 - -10.8   -5.5112   TGCATCAACAAAAAA            GCACATTC AAGA GAATGTGC             TTTCATGCGATTTAT 100 37
HC659_RS14690 2855070 .. 2855092 - -11.4  -5.60993   CCTTTTATAAAAAAA           CTTCACCTAA ATT TCAGGTGAAG           TTTCATAGTATTTAT 100 45
HC659_RS14685 NONE
        argH 2852136 .. 2852153 -  -7.7  -5.71712   TGGCATACAAAAAAA             GCTGCCT GTAC AGACAGC              TTATTCTGCAGGAGA 100 222
HC659_RS14675 NONE
HC659_RS14670 2850479 .. 2850504 - -14.1  -5.75538   CTGAAAAAATAAAAA         CCACCTCCTGA TTCA TCAGGAGATGG          TTTCACGGTTTAAAG 100 35
        snaA 2848851 .. 2848864 -  -3.7  -2.62184   GGCTGCCTCACATCA               TGCCC AGCT GGGCG                CACCTAAAAGCGTTG  45 9
        tcyJ NONE
        tcyK NONE
        tcyL NONE
        tcyM NONE
        tcyN NONE
HC659_RS14630 NONE
HC659_RS14625 NONE
HC659_RS14620 NONE
        ribR NONE
        sndA 2840290 .. 2840302 -    -2  -2.64225   GCAAAAACGATTAAT                TTCT TCATC AGAA                CACCCCATCTATATC  40 39
HC659_RS14605 2839304 .. 2839320 -    -8  -5.79595   CTGGAAAATAAAAAA              GAAGCC CGACC GGCTTC              TTACAGCGTTGATTT 100 100
HC659_RS14600 2837656 .. 2837667 -  -5.8  -3.57263   AGGCGTACGGGCAAA                GCCA TCTT TGGC                 AAAAGAAATATGTTC  59 258
HC659_RS14590 2836490 .. 2836512 -  -8.5  -3.41309   ACAGATGAACACTAA          GAG-AGAGGG TCTC CCCTCTACTC           GTGTTCTTTACATAA  70 20
        dnaE NONE
        maeB 2830384 .. 2830433 - -14.6  -3.76749   AAAAATAATGTTAAA CCCGGCTGAAATTTTTTTAAGG CTAACC CCCTAAAAAAATTTCAGCCGTC AGTTTAACTTGAGAA 100 91
        accD NONE
        accA 2828301 .. 2828328 - -12.2  -5.27923   GAATGTCACAAAAAA        TAAACGTG-AGCC AAA GGCTTCACGTTTA        TTTAGTTTACCCCGA 100 27
        pfkA NONE
         pyk 2825355 .. 2825372 - -11.3  -4.85822   ATGATAAAGAGAAAA             GGAAGGG ATTC CCCTTCC              GTTTTCACCTGTAAT 100 40
        fxsA 2824876 .. 2824911 - -10.5   -4.7254   ACCGTTCAGCAAAAA    TAAAACGGCAGCCGT TTTTTC ATGGCTGCCGTTTTT     TATTTGATGATGATC 100 25
HC659_RS14530 2823180 .. 2823195 -  -7.5  -6.02914   TGCATACAAAAAAAA              GCGGC TTTAAG GCCGC               TTTTTGTTATGAAGT 100 32
        citZ 2821623 .. 2821654 -  -5.5  -4.45083   TTCATATTTAGAAAA      CATTTTATTTTTCT TATAT AGA-AAATAAAATG      TTTTTTCCTAACATT  70 120
         icd NONE
         mdh 2819293 .. 2819322 -    -8  -4.81551   CATTTATAGTAAAAA       GAGAAAGGCT GTATTAAGCA AGCCTTTCTC        TCTTTTTATTAGGAT  88 34
        phoP NONE
        phoR 2816545 .. 2816571 -  -5.9  -5.48787   AGAAGACACAAAAAA        GGACGGGAAC ACAAATAG GTTCCCG-CC         GTCAAAATTGGCTCC  91 119
        polA NONE
        mutM NONE
        ytaF NONE
HC659_RS14485 2811488 .. 2811508 - -14.1  -5.47399   TTAATGGCAAAAAAA            CACCGTTCA ATA TGAACGGTG            TTTTTTGTATTATGC 100 35
HC659_RS14470 2808825 .. 2808849 - -14.3  -4.99435   CGTAAGAACCAAAAA          GCAGCCAGCGC TCC GCACTGACTGC          CCTCATGCTTTATGA 100 35
HC659_RS14465 NONE
HC659_RS14460 2806946 .. 2806991 - -13.5  -5.35224   TTTATAAAAATAAAA GGAGCATAAGCTAAAAAGCGCA TAA TG-GCTTTCTAGCTTCAGCTCC CTTTGTGTTCGCAAT 100 46
        nrdR 2806254 .. 2806277 -  -6.8  -4.50976   TTGCACATGAGAAAA          GAGCTA-GAAG AAT CCTCTTAGCTC          TTTTAACGCTCTTTC  76 28
        dnaB NONE
        dnaI NONE
HC659_RS14440 NONE
        ytxC 2801822 .. 2801847 - -11.1  -4.96848   TTTTGCATATAAAAA         CCCCGCCCCCT ATGA AAGGGACGAGG          TTGAATAAACGGAAT 100 363
        thrS 2799825 .. 2799850 -   -12  -6.04953   AGAGAAATAAAAAAA         GCATGATCTC TTCAAT GAGATCATGC          TTTTTTATTTTATTT 100 35
        lytS NONE
        lytT 2796378 .. 2796401 -  -5.3  -4.81249   GCTGAAATGCAAAAA          GCCGC-CCAT CAAAT ATGGAGCAGC          TTTTTCAATTCCTTC  75 10
        lrgA NONE
        lrgB 2795074 .. 2795094 - -12.6  -6.14618   CATAAAATAAAAAAA            GCCAAGGC ATTCA GCCTTGGC            TTATCCTCCGATCAG 100 26
        infC NONE
        rpmI NONE
        rplT 2792799 .. 2792819 - -12.6  -5.03994   CTTTATATAGAAAAA            GCCGCTCT GCTGG AGAGCGGC            TCTATATGATTACTT 100 35
HC659_RS14380 2792473 .. 2792499 - -13.8   -5.4477   AAACTCGCAAAAAAA         GCAGAAGAGCGT TAA ACGCTTTTCTGC         TTTTTATAAATCAAA 100 29
HC659_RS14370 2790790 .. 2790817 -  -9.2  -5.76633   GTACAGACAAAAAAA        TAGAATCCACCT CAAT AGGCGGATTCTT         CCGTATCTTTATTGG 100 34
        abnA 2789631 .. 2789649 -  -8.8  -5.40072   TTTCTTTTAAAAAAA             GCCGGG GGCAGAG CCCGGC             TTTTTGATTCAATAG 100 34
        araA NONE
        araB NONE
        araD NONE
        araL NONE
HC659_RS14340 2783622 .. 2783635 -  -3.1  -2.91264   CGGGCTATTCATATA               GACCA TGGT TGATC                AGCGTTTTGTTTTCA  44 1
HC659_RS14335 NONE
HC659_RS14330 NONE
        araQ NONE
HC659_RS14320 2778905 .. 2778924 - -13.6  -3.82946   GCAGTTGAAAGACAA            GCCGGAGA GAAA TCTCCGGC             TTTGCTATTCTTATG 100 36
HC659_RS14315 NONE
HC659_RS14310 2776539 .. 2776563 - -17.3  -4.02456   AAACATCATGAGAAA          GCCCAAAACAG ACA CTGTTTTGGGC          TTTTGTGCGTTATTC 100 35
HC659_RS14285 2771138 .. 2771161 - -13.2  -6.34616   GGAAAATAAAAAAAA          CCCGTCCCTT GTAC AAGGGACGAG           TTGTGGCCGCGGTAC 100 297
        pheS NONE
HC659_RS14270 2767587 .. 2767608 - -13.1  -5.36441   CGTTCATAGAAAAAA           GCTTGCAGA TTTC TCTGCAAGC            TTTTTTATCAGCCTC 100 33
        zapA NONE
HC659_RS14255 2765687 .. 2765705 -  -5.3  -5.45726   CATACTTGAAAAAAA             CTTCTCC GGACA AGAGAAG             TTTTTTTATGCCCCG  88 31
        polX NONE
HC659_RS14245 NONE
HC659_RS14240 2761004 .. 2761031 - -10.1  -5.78622   GGACGGCAAAAAAAA        GAAAAAGAAAG GTAAAT CTTTCTTTTTC         TCATAATATGAACAG 100 122
        lcfA 2759178 .. 2759195 -  -7.1  -4.03234   TCCTTCCTATAGAAA             TGAATGA CTAT TCATTCA              TAATTTCATGATAAG  73 87
        fadR NONE
HC659_RS14225 NONE
        etfB NONE
        etfA 2755948 .. 2755968 - -15.5  -5.24799   TTACAAATATAAAAA            CCCGGACTT TTA AAGTCCGGG            ATTTCCTTTATGAGT 100 33
HC659_RS14210 2754239 .. 2754265 - -12.3   -4.7416   TTAAAACCTGAAAAA         GAGCGCCGG CATGAAGCT CCGGCGCTC         TTGCGCGATTAAGAA 100 34
        trxA 2753592 .. 2753613 -    -8   -5.7946   TGGCGAATAAAAAAA           GCGATCCC TCAATC GGAATCGC            TCTGGCATGTAAGCA 100 49
        uvrC 2751429 .. 2751453 -   -13  -5.88565   TCCACAATAAAAAAA          GCAATGAGAG GAATA CTCTCATTGC          TTATCAATTAATCAT 100 301
HC659_RS14195 2750097 .. 2750119 -  -9.9  -4.87291   CAGTGTAATCAAAAA          GGCGGTGACT GCAT AGTC-CCGCC           TTTTTGATTGTCATT 100 39
        sdhC 2748751 .. 2748763 -  -3.3  -4.42806   GTACTCTTAAACAAA                TGCGA AAA TCGCT                TTTAAGCCTACGTAT  62 4
        sdhA NONE
        sdhB 2746154 .. 2746173 -   -10  -5.41143   TATTGTTTAAAAAAA            CCTCTCCC ATGC GGAAGAGG             TTTTTTCTTCTTATA 100 36
HC659_RS14170 2745670 .. 2745684 -  -2.9  -3.31263   AGGTGACGTTTACAA               GATAA TTAGT TTATC               GTGTATGAAGAAGCG  46 21
        gerE 2745172 .. 2745184 -  -4.1  -4.63218   CTTTTTTGAAGAAAA                TGCAA GAC TCGCA                GGAGAGAAATAGAGG  66 181
HC659_RS14160 NONE
        racE 2743804 .. 2743824 - -13.3   -5.9362   CAAAACAGAAAAAAA            CCCGCAACA TAC CGTTGCGGG            GAAAACTATCTTTTA 100 31
        gerM 2742559 .. 2742589 -    -7   -4.2528   CCGGAATTGAATAAA      GAAAGAGG-CAGC CGGAAC GCTAACCTCTTTC       TTTCTAGTATATCAA  75 51
HC659_RS14145 NONE
HC659_RS14140 NONE
HC659_RS14135 2740593 .. 2740632 -  -3.6  -2.57211   ACGGTTTTTTAGAAT  TTTTTTCATGAGGAAGAA AATT TTCTTCCTCATGACATTT   TCATAGTGTGACTCG  45 26
HC659_RS14130 2740390 .. 2740414 -   -13  -5.56673   ACCGACAACAAAAAA          CCTCAAATCC TAAAT GGATTTGAGG          TTTTTCTTTTGGTAC 100 39
        ilvB NONE
        ilvN NONE
        ilvC NONE
HC659_RS14095 NONE
        leuB 2731614 .. 2731634 -  -8.3   -3.1355   TCTACCTAGAGCTAA            GACCGCTTA ACG TAAGCTGTC            ACACATTAGAAATTG  69 24
        leuC NONE
        leuD 2729526 .. 2729548 -  -7.6  -5.48825   CACCAGGCAAAAAAA           GCCGCCGG ACAAATA CCGGCCGC           TTTTTCAGGCTTGAA 100 30
HC659_RS14075 2728389 .. 2728399 -  -2.6  -2.89079   AATACAACCACTATA                 TTAT AAC ATAA                 CACATAGCGCTTTCA  42 56
HC659_RS14070 2726874 .. 2726898 - -12.9  -4.43859   CATAATTGTACAAAA          CAAGGCACGAA TGA TTCGCGCCCTG          TTTTATTAGTACTAT 100 55
        clpX 2725355 .. 2725380 - -17.7  -5.47218   TTGCATGCAAAAAAA         CCTCCTGAGTG TTAC CACTCAGGAGG          TTTGTGCTTATCTTT 100 39
        lonB 2723564 .. 2723582 -  -7.5  -5.52384   CCTTCATGAAAAAAA             CCCTATT ATCAA AATAGGG             TTTAAACGGATTCTT 100 27
         lon NONE
HC659_RS14050 2720480 .. 2720501 - -14.5  -5.03227   ATACGATAAATAAAA           CCGGTAGAG GATC CTCTACCGG            TTTATCATTTTTTTG 100 19
HC659_RS14040 NONE
        ccsA NONE
        hemC NONE
HC659_RS14025 NONE
        hemB NONE
        hemL 2713458 .. 2713483 - -10.5  -5.20216   GAGAGCACGAAAAAA         CCGGCA-CAAGG AGT CCTTGATACCGG         TTTTCACTCTTATCT 100 35
      spoVID NONE
        cotN 2710564 .. 2710592 -  -8.8  -4.63044   ATGGATATAAACAAA        CAAGTCCGCGCC ATTAA GACGTGGACTCG        TTTTCAGCCTGAAAT  90 10
        valS 2707244 .. 2707265 - -14.5   -3.7511   TCTTTTATAAGACAA           GGCGGTTTC TCTA GAAACCGCC            CCGGCTTTTCATTAA 100 37
HC659_RS13990 2705883 .. 2705911 - -10.4  -6.32216   ACACATAAAAAAAAA        CGGCAGAATC TTTTTTTTT GATTCTGCCG        GAGCCGGATGCTTTT 100 39
HC659_RS13985 2704983 .. 2705007 -  -4.3  -5.96894   AGGCAAAGAAAAAAA          GAACAAGAC TTTTGTC GCCTTGTCC          AAAAAACGTTCGTCA  95 54
      spoIIB NONE
         maf NONE
        radC 2702390 .. 2702403 -  -2.3  -4.98531   TTCTTAAAGCAAAAA               TACCC TAAA GGGAA                AAACTCATAAACTCT  66 72
        mreB NONE
        mreC 2700426 .. 2700457 -  -4.4   -4.0251   AGCATCATAACGAAA      GGGAGAAGGAAACGT TTC ACGAT-CCTTCCTCC      TCTGTATCGACAGTC  61 10
        mreD 2699916 .. 2699929 -  -2.5  -4.34482   TTCGTCAAAAAAAGA               TAAAA TCCT TTTTA                CTCATCTCTCAATTC  57 23
        minC NONE
        minD 2698337 .. 2698362 -  -6.1  -6.20267   GCAAAAACAAAAAAA         CCTGACACAGC ATAT GCTTTGCCAGA          TTCTTCTCTTTGATT 100 49
     spoIVFA NONE
     spoIVFB NONE
        rplU NONE
HC659_RS13925 NONE
        rpmA 2695457 .. 2695478 -  -8.7  -5.79526   ATATTGCAAAAAAAA           CTCCAGTCA TCAT CGACCGGAG            TTTTTTGAATCATTA 100 38
       spo0B NONE
        obgE 2693233 .. 2693254 - -14.5  -3.63744   CCCCCCTTTAAAATA           GAGAGCCTG ACAC CAGGCTCTC            TTTTCAGCCAACATT 100 43
        thrR NONE
        pheA 2691876 .. 2691889 -  -8.1  -5.66989   TAAAGACTAAAAAAA               GCCCT CTAG AGGGC                TTTTTTATAATTGGT 100 30
        nadB NONE
        nadC NONE
        nadA 2686559 .. 2686580 -  -2.4  -3.75653   AAGGAAGGGAAAATA           TTTCTGATC TACGT GATC-GAAA           GCATTCGATTCAGAG  49 12
        safA 2685261 .. 2685280 - -10.8  -6.09196   TTGAAAATAAAAAAA            GGAACGAT TTAC ATCGTTCC             GAACGATCACTCATT 100 32
        sgpA 2684508 .. 2684534 - -11.6  -5.30616   TGATGCAAAGAAAAA         GGCTGCCGAA TATCACT TCCGGCAGCC         CTTCCTTCCTAGCGG 100 34
HC659_RS13855 2683689 .. 2683713 -  -8.5  -4.43213   CTGAACATACTAAAA          CCGGCCCGA TATGACC TCGTGCCGG          TTTTTTATGAACGAT  86 30
HC659_RS13835 2681222 .. 2681243 - -17.3  -4.98531   TTCTTAAATCAAAAA           GGCAGCCGC ACAA GCGGCTGCC            TTTATCATGTATTTT 100 41
        iolG NONE
HC659_RS13820 2677923 .. 2677937 -  -2.1  -3.45324   TAGTTTGACCAAAGA               GGCTA CTGCT TAACC               GTTTTATCAAAATTT  45 13
        bofC 2677334 .. 2677349 -  -7.6  -5.86061   TTTCACGAAAAAAAA              GACATG AATA CATGTC               TTCAATCAGCGGACG 100 41
        ruvA 2676598 .. 2676617 -  -2.8  -2.63596   CTTCACTTGAGACGA            GCCGTTCA TCCA TGAACATC             ACCTTACTTTAATAG  41 29
        ruvB NONE
HC659_RS13800 NONE
        queA NONE
         tgt NONE
        yajC 2672828 .. 2672849 -   -13  -5.36441   CTTCCACATAAAAAA           GAGCGGGC TCACTT GCCCGCTC            TTTTTTGTTTGCTAT 100 56
HC659_RS13775 2671334 .. 2671350 -  -2.2  -3.93369   GCAACCGTAAGCAAA              GTGCTG CCGAT CAGCAT              CAAAATCAAGGAGTA  53 255
        comN 2669605 .. 2669619 -  -6.4  -2.60075   CCTGTGCGAATCAAC               CTGCTA TCT CAGCAG               TTCTTCCAATGCTTC  57 14
       secDF 2667323 .. 2667348 - -15.5  -5.09426   TGCAACTTCAAAAAA         CAGGCTGCCCT GCAG AGGACAGCCTG          ATATTTTTTATTGCG 100 33
HC659_RS13755 2666687 .. 2666707 -    -4  -2.60615   ACTGGTTTTAAACAT            GGCTTAAC ACTAG GTTAAGCT            CCCTTTGCTGTTAAT  45 19
HC659_RS13750 2666243 .. 2666281 - -10.4  -2.76227   GCTAACATAAATTCA  CCCCTCAACC-ACCCTA TTATAC TAGAGCAGGCTGAGGGG   TTTCAAATAATATTC  77 46
        recJ NONE
HC659_RS13740 2663317 .. 2663335 -  -3.8  -5.31545   AACAATAGGAAAAAA             GCACCC TGACATG GAGTGC             TTTTTCGTTATGCGG  78 47
        relA NONE
         dtd 2660497 .. 2660541 -   -14  -2.77876   GGATTAGAGAAATAC TTC-CAATAAAAAAAGCTGCC TTTT GGCAGCTTTTTTTATTTTGAA TCCATAATGAGCGTG 100 16
        yrzK 2658331 .. 2658367 - -18.2  -5.79588   TGAAAATGAAAAAAA    CTCCCGCCCCTACTAT ACATG ATAGTAGGGACGAGAG    TTATACCCGTGGTGC 100 304
HC659_RS13715 NONE
        aspS 2655166 .. 2655187 -  -5.3  -2.99834   AAATCATATCACAGA           CGATT-TTGA TTT TCAAGAATCG           AACTGCAAATTCAGT  53 36
        ssrS 2654905 .. 2654923 -  -8.8   -3.2511   TTTCATCTATAAAAT             GGCTGATC CAT GAGCAGCC             GTTTTTTCTGCGCAC  71 47
HC659_RS13700 2654054 .. 2654100 - -16.2  -5.18643   TTAATGAAAAGAAAA TAAAACAAAAAAACAGCCTTGA TCA TCAAGGCTGTTTTTATGCATTA TTTATCCTTCACACG 100 23
        cymR NONE
HC659_RS13685 NONE
        mnmA 2649839 .. 2649857 -  -6.7  -5.14563   CCTTTCATTAAAAAA             CCCCAAC TCAGT GTTGAGG             TTTTTCATCTTTTAT  86 37
HC659_RS13675 NONE
HC659_RS13670 2646720 .. 2646737 -  -9.1  -5.37593   CTGCAAATGAAAAAA             CTCCCGC TTGC ACGGGAG              CATTTTATTGCTGTT 100 30
HC659_RS13665 NONE
HC659_RS13660 NONE
HC659_RS13655 2645776 .. 2645797 - -11.7  -4.74013   GGCAAACATAGAAAA           GGATACTCT TTGG AGAGTATCC            TTTTTGCATTAAAAC 100 34
HC659_RS13630 2641322 .. 2641364 - -12.9  -5.22312   AGTGACAGCAAAAAA GCCCTC-CCCCTATGCAAAC CAAC GTTTACACAGGGACGAGAGC TGTCTCGCGGTACCA 100 262
        alaS 2638643 .. 2638653 -  -3.2   -3.3217   GGCGAATTATAAAAC                 GGAT TTC ACCC                 AATCTTCTACAGAAG  48 6
HC659_RS13620 NONE
        ruvX NONE
HC659_RS13610 2637519 .. 2637540 -   -13  -5.43621   ATAAAGCAGAAAAAA           GCCGGAGC AGTATA GCTCCGGC            TTTGATTTGGCGCGA 100 45
        mltG 2636326 .. 2636344 - -10.3  -4.75309   GGAAAGCGAACAAAA             GGAGAGC TTTTT GCTCTCC             TTTTATTTCTCATTT 100 28
HC659_RS13600 NONE
HC659_RS13595 NONE
HC659_RS13590 NONE
         udk 2632606 .. 2632629 -  -9.7  -3.83324   TTATAAACAGGGAAA          GAAGGGAAT TCGCAC ATTCCCTTC           CTGCCTATACATAAT  85 74
        greA 2631908 .. 2631934 - -15.2  -5.61596   ATCTTCATAAAAAAA         CACCTCACCCAC ATT GTGGACGAGGTG         TTTCGCTGCTAAACA 100 45
HC659_RS13575 NONE
HC659_RS13570 2629346 .. 2629378 - -19.3  -4.19506   AGCTGAAGCCTAAAA      CAAAAGCAGCCGGTT TTA ACCCGGCTGCTTTTG      TTTATTTTAGCTTTT 100 27
HC659_RS13560 NONE
        mtnN 2627567 .. 2627587 -  -7.6  -4.96848   GTTTTTAGAGAAAAA           CGGAGGAGA ACGT TCTCC-CCG            TTTTAATGAATTCGT  89 28
HC659_RS13550 NONE
HC659_RS13545 2625421 .. 2625435 -  -2.8  -3.29541   ACGACTATTATAATA               TAATCC GGC GGCTTA               CAGAGAAAGTAATTC  46 51
HC659_RS13540 2625121 .. 2625142 - -10.2  -5.21506   ACAATAACAGAAAAA           CAGCCATC TCTGAT GATGGCTG            TTTTTTTATTCGTCG 100 31
HC659_RS13525 2620784 .. 2620830 - -11.1  -5.52096   AAAGGCAATAAAAAA GGCAGCACTCAAATAACCTGTGT CAA AC-CAGGCG-TTTGAATGCTGCC TAACTTGTATGCATA 100 180
HC659_RS13520 2619574 .. 2619600 - -13.7  -4.02051   CATCAAGCGAAATAA         CCCGCGGCACA CCCCT TCTGCCGCGGG         CAAATAAAAACCGCA 100 348
HC659_RS13515 NONE
HC659_RS13510 2619039 .. 2619061 - -13.6  -5.40072   TTTTCCGCAAAAAAA           GCAGAAAACA AAA TGTTTTCTGC           CCTCTTTCTAATGCC 100 33
HC659_RS13505 2618279 .. 2618331 -  -2.3  -6.04324   GCAAAAAATAAAAAA TTAAGAAAATATACCCAA-ATCCT AATGCG AGGATCTTGGATATATTTCCCGAT AAATTTTTTATTTAA  87 33
        fatR NONE
HC659_RS13495 2614320 .. 2614342 - -16.4  -3.55866   TCATATGCAAAGCAA           TCCCGCCAAT CTG ATTGGCGGGA           TTTTATATTTTACAT 100 35
HC659_RS13465 2608415 .. 2608439 - -10.1  -6.23545   GTGAAATAAAAAAAA          GACAAGGGA TACTCAC TCCCTTGTC          TTTTTATATGTGTCA 100 90
        levR 2603430 .. 2603470 -   -13  -5.79588   TTAAAACGAAAAAAA TAAACCTGTATTAAAATGG TGTT CCATTT-AATACAGGTTCA  TATGAAAAAACTGTT 100 42
HC659_RS13445 NONE
        levE NONE
        levF NONE
        levG 2600585 .. 2600595 -  -3.2  -3.09749   CACTTTCAAGAGAGA                 CTGC TGC GCAA                 GCTGGTCCGTTTCTG  45 125
        sacC 2598470 .. 2598494 - -11.5  -4.20953   TTAAAATAACAAGAA          GGCACAGAC TGTTCGG GTCTGTGCC          TTTTTTAAAATTAAG  91 36
        adhR 2595788 .. 2595821 -  -9.7  -4.42386   TCTTGATGGAGAAAA     CAGGCCAGAAACAAA ATCC TTCGTTTTTGACCTG      CCCTCTTCACACGCA  91 48
HC659_RS13375 2592492 .. 2592505 -  -3.8   -3.0636   GGACACCATACAAAT               CAGC GTAAAT GCTG                CAAGTTCAGTGTCCG  47 135
HC659_RS13370 2592342 .. 2592354 -  -2.7  -2.71731   TCCAGTCGGTAATCA                CGATT GAC AATCA                GGAAAAAGGACATGG  41 42
HC659_RS13365 NONE
HC659_RS13360 2591253 .. 2591279 - -12.4   -4.7373   TCATCGCAGCAAAAA         CCATACCAACTA TTG TTGTTGGTATGG         TTCGTCCTAGATAGG 100 77
HC659_RS13345 2588392 .. 2588412 -  -9.1  -5.28942   TACTGCAAATAAAAA            GATACCAAC ATC ATTGGTATC            TTTTAGATTGAGTTC 100 69
HC659_RS13335 2585994 .. 2586006 -  -2.7   -3.1505   ATGACTTTTGATTAA                CATAT CTT ATACG                GTGTAATAAGTTAAA  45 85
HC659_RS13330 2584424 .. 2584448 -    -8  -4.30177   TATCATATTAAGAAA         GACAAGAG-CA TGTT TGTCTCTTGTC          TTTTCCACATCATGC  78 212
        sigZ 2582689 .. 2582719 - -10.6  -3.60098   ATGGCCTATTTTAAA       GGAATAACTGACTA TGT TCATCAGTTATTCC       TTTAAAATACGAAAG  82 19
HC659_RS13315 2581820 .. 2581830 -    -4  -2.83345   TTCATAGAGTAATCA                 TCAT TTA ATGA                 GCCATCATCTCATGG  46 19
HC659_RS13310 2581549 .. 2581578 - -14.5   -5.4492   TAGACATATAAAAAA       CCGCAAAGCTTTCT TGA AGA-AGCTTTGCGG       TTTTTGGGTCTCTTC 100 47
        aadK 2575983 .. 2575994 -    -3  -4.40561   TTTCGTTAAAAAGAA                CAAA AAAT TTTG                 GACAAGAATAATTAT  60 163
HC659_RS13280 2575332 .. 2575368 -  -5.3   -5.9003   AAACGAACAAAAAAA    GAACATGTTTTGAAAAA AGA TTGATCAAAACATCTTC    TTATATGTTGTCATA  91 66
HC659_RS13270 2574175 .. 2574193 -    -6  -5.02439   AGAGAATGATAAAAA             GCACTC TAATAAC GAGTGC             CGAAATGAAAAACTA  80 38
HC659_RS13265 2573354 .. 2573377 - -14.6  -3.98173   GGAAATCGAATTAAA          GCGCCCTTCC TATT GGAAAGGCGC           CTGCCGTTTTACTGT 100 57
HC659_RS13260 2572791 .. 2572811 -  -3.3  -3.29421   TTAAATATAAAATCA            GGACGATTT GTA AAATGATCC            ATTGAGATCAGTATT  48 2
HC659_RS13255 2571324 .. 2571348 -  -4.3  -5.88476   AAAACAAATAAAAAA          CACCGATAG GATGAAA CTATTGGTG          TTTGCAAGACATCTT  91 183
        azlB NONE
        azlC NONE
        azlD 2569061 .. 2569073 -  -6.3  -2.54841   GTTCAATAAAAGCAT                GATCA TTT TGATC                GTTTCCGATATCGGT  54 40
        brnQ NONE
HC659_RS13225 2567267 .. 2567289 -  -6.3  -5.24989   GTATAGAGCAAAAAA           GCAAACTTC GGTAT GTAGTTTGC           TTTTTCTTCGTGATT  89 62
HC659_RS13215 2565474 .. 2565500 - -16.7  -5.59879   TATAAACATAAAAAA         GCGGAGCAAAC ACATG GTTTGCTCCGC         TACCCTAGTTTCTCT 100 80
        czcD 2564221 .. 2564231 -  -5.4  -2.82516   GCCCCGATTACTATA                 GTGT CGT ACAC                 ATTATCACCCCGCCA  52 113
HC659_RS13205 2563157 .. 2563187 -  -4.1  -5.09895   TATTCACGCAAAAAA       TAGAGCAGTAA ACATGTGAG TTACTGCTCTG       CTTCGTTTATTCACC  74 32
HC659_RS13195 2561088 .. 2561102 -  -2.2  -2.65046   GAAAAACAATAAACC               TTCAAA CAT TTTAAA               TCCCCCACCGTCTAA  40 37
HC659_RS13190 2560905 .. 2560926 -  -8.7  -5.56372   AAAGCAAAATAAAAA           CACACCTGA ATTT TCTGGTGTG            TTTCAATAATATCCA 100 52
HC659_RS13185 2559296 .. 2559321 - -11.3  -5.15969   CTGCAAGTTAAAAAA         GCCTG-GATGAA AAT TTCATCTCAGGC         TTTAAGCATCTTATT 100 71
        bltR 2556427 .. 2556440 -  -3.9  -2.73218   CACAATAGAAGCAAT               TTTTC ATAT GAAAA                TTTCGTAATCTTACA  45 36
HC659_RS13165 NONE
HC659_RS13160 2555188 .. 2555209 - -11.7  -3.96681   CGAATAAAGCAATAA           GCCGATTTA ATTT TAAATCGGC            TTTATTTATCAATTA  91 165
HC659_RS13155 2554340 .. 2554362 -  -9.2  -5.00642   TAACGCATATAAAAA           TTCGTCAACC TTA GGTTGATGAA           TTTTTATCGGCTCTT 100 29
HC659_RS13150 2553624 .. 2553635 -  -4.4  -2.50779   ACTAGAAGTTAATAC                CATG TATT CATG                 CCCCCTTTTATATTT  47 127
HC659_RS13140 2552681 .. 2552708 -  -6.4  -4.33754   AAGCAGAACTTAAAA        TGTTAAAGATAC ATCT GCATCTTTAGCA         AAATCTAAAAAGGTA  73 311
HC659_RS13130 NONE
HC659_RS13125 2551214 .. 2551236 -  -4.9  -4.54727   CCTTTCAAAGGAAAA           GGGTATC TTTTTATTC GATACCC           TTTCACATTATTAGC  71 36
HC659_RS13120 2550270 .. 2550283 -  -5.3  -3.14468   TGGTACTATAGTCAA               GACTT GTCC AAGTC                ACCATTATCAAAATG  55 153
HC659_RS13115 2549095 .. 2549110 -  -6.2  -3.57039   GATGTATAACGATAA              CTAATG TTTT CATTAG               ACTGATTATCCTTTC  61 267
HC659_RS13110 2548173 .. 2548231 - -25.8  -2.96329   GGAAGGTAATAATGA TGTTTAAAAGGTGTTTTGATCCCTGTCT CAT AAACAGGGGTCAAAACACCTTTTAATCA TCGGTTTCTTTTCTG 100 377
        yrkP NONE
        yrkQ NONE
        psiE 2542642 .. 2542661 -  -8.6  -6.11392   AAACAAATAAAAAAA            CCGATGGT TTGT ACCATCGA             TCTGTTTTCTATATC 100 462
HC659_RS13075 2542175 .. 2542194 -  -6.4  -3.86481   AATAATGCAGAAGAA            GCCGGA TCTCATAC TCCGGC             TTTCTCTATTTGAAA  66 220
HC659_RS13050 2540283 .. 2540295 -  -3.4  -4.68424   CAACTGATCCAAAAA                CTTC CTTAT GAAG                AACAATCTCTTCTCT  64 173
HC659_RS13045 2539781 .. 2539797 -  -5.1  -3.87869   TGAATCCTTTACAAA              CCCTTAC GTG ACAAGGG              TTTTTGTTGTTTTTC  61 148
HC659_RS13035 2538860 .. 2538875 -  -2.6  -2.73875   CTTTTTTCAAGATGA              CTTTCA TAAT TAAAAG               GCCTCCTTTGTGAAT  41 46
HC659_RS13030 NONE
HC659_RS13025 NONE
HC659_RS13020 NONE
HC659_RS13015 NONE
HC659_RS13010 2537481 .. 2537500 -  -3.5  -3.91984   ATAGCCTTTAAAGAA            GTCCACT TTGCCG AGTGGGC             TTTTTTATTGCGCGT  55 30
HC659_RS13005 NONE
HC659_RS13000 NONE
HC659_RS12995 NONE
HC659_RS12990 NONE
HC659_RS12985 2533859 .. 2533877 -  -3.8  -3.03443   TTATCAGCAGAGACA             CGACTGCT TTA AGCACTCA             GCATCCGCTCCATTT  47 15
HC659_RS12980 2533310 .. 2533332 -  -3.3  -3.77588   AGTTCATATCAAGAA           CACTGAGGC TAAGC GCTTCGGTG           TTTTTTATTTTTAGG  52 36
HC659_RS12975 2533004 .. 2533016 -  -5.5   -2.7566   ATCCAAGCCGAAGGA                GGAGA TAT CCTCC                TTCTTGTTTACCTTT  52 64
HC659_RS12965 2531294 .. 2531313 -  -3.6  -3.40622   TATCGGCAAAAGAGA            GCGATACAG GTA CTAT-TCGC            AAAATTTGTCGAACG  50 111
HC659_RS12960 2530775 .. 2530790 -  -5.4  -5.79595   TTTGAAAATAAAAAA              GCTCCT CAAA AGAAGC               TTAAATATGTTTTTT  91 26
HC659_RS12955 NONE
HC659_RS12950 NONE
HC659_RS12945 NONE
HC659_RS12940 NONE
HC659_RS12935 2525567 .. 2525584 -  -8.5    -5.093   CTTAAAATAAGAAAA             GACTTCT AATT AGAAGTC              TCACCAGCTGTATTC 100 13
HC659_RS12930 NONE
HC659_RS12925 NONE
HC659_RS12920 NONE
HC659_RS12915 NONE
HC659_RS12910 NONE
HC659_RS12905 NONE
HC659_RS12900 NONE
HC659_RS12895 NONE
HC659_RS12890 NONE
HC659_RS12885 2519371 .. 2519385 -  -4.2  -2.53213   GAAGTTGTTAAGCCA               GCCC TCTTGAT GGGC               CAACATTTATACTGA  47 192
HC659_RS12870 NONE
HC659_RS12865 NONE
HC659_RS12860 NONE
HC659_RS12855 NONE
HC659_RS12850 NONE
HC659_RS12845 NONE
HC659_RS12840 NONE
HC659_RS12835 NONE
HC659_RS12830 NONE
HC659_RS12825 NONE
HC659_RS12820 NONE
HC659_RS12815 NONE
HC659_RS12810 2507263 .. 2507277 -  -2.8  -2.80511   TTTACAACGGAACCA               CCTCCT TTA AGGAAA               AATAAAAAAGCCCTA  42 38
HC659_RS12805 2506296 .. 2506325 -  -9.9  -5.65927   GAGGCAAATAAAAAA       GGACAGCCGGATC TTAT GAGACGGCCGTCC        CTCGAACTGAAAAGT 100 9
HC659_RS12800 2505832 .. 2505852 - -11.1  -5.88565   TGTATAATAAAAAAA            GCCACTGGC TTA GCCAGCAGC            TTTGTCTGCACTATT 100 14
HC659_RS12795 2504943 .. 2504969 - -12.4  -3.03755   AAATAAACATAAGTA         TCTCCTTGAGAA AGA TACTCAAGGAGA         CTATTTATTTACTTC  85 34
HC659_RS12790 NONE
HC659_RS12785 2503726 .. 2503746 - -13.3  -3.33671   AGAGTCACTTTATAA            GCCCCTCTC AAT GAGAAGGGC            TTATTTTATTTAATT  95 235
HC659_RS12750 2498119 .. 2498138 -  -2.2  -3.33298   TGCAAGCAAATAAAT            CAATTTAT TTTG ATTAATTG             TAAAACCCGCTAAAA  45 298
        arsR NONE
HC659_RS12740 NONE
        acr3 NONE
HC659_RS12730 2495689 .. 2495710 -  -5.9  -5.85737   ACATTAATAAAAAAA           GGACACATA TAAA TATGCATCC            TTTAACAAAAGAGTT  93 44
HC659_RS12725 2493757 .. 2493776 -  -9.2  -4.54821   ATTGTAATTACAAAA            GGGGGGTG CATA CACCCCTC             TTTAATACGTTTCAA  91 27
        nucB 2492767 .. 2492786 -  -9.3  -3.40878   AGGATTGTAACAACA            GAGGCTC AAGAAA GAGCCTC             TTCTTTATTACTGCA  76 33
HC659_RS12695 2489289 .. 2489317 -    -6  -5.34857   CCAAAGAAAAGAAAA        TAACCTGAATCC GCACT GGAAACAGGTTA        TCCGTTAAATCCTGC  89 43
HC659_RS12690 2488150 .. 2488167 -  -7.7  -5.14965   ATTTTCAGCAAAAAA             CACCCCT AAAA AGAGGTG              TTTTAAAGGGCCGGT  93 210
HC659_RS12680 NONE
        yqeH NONE
HC659_RS12670 NONE
        yhbY NONE
HC659_RS12660 NONE
HC659_RS12655 NONE
        rsfS NONE
HC659_RS12645 2482525 .. 2482546 - -11.7  -5.07053   AAGCATTTTAAAAAA           CCATCGTTT TAGG AAACGATGG            TTTTTGATTTCTGCG 100 12
       comEA NONE
HC659_RS12630 NONE
HC659_RS12625 2477821 .. 2477835 -  -2.8  -5.42259   TGATTTTGAAAAAAA               CGTTCA AAG CAAACG               AAATGATGCTGTAGA  79 165
HC659_RS12615 NONE
        holA 2476522 .. 2476543 -  -8.7   -5.1523   TGCATAATATAAAAA           CGATCCTCA ATAA TGGGGATCG            TTTTTTTCATTTCTT 100 10
         gpr NONE
HC659_RS12595 NONE
HC659_RS12590 2473267 .. 2473279 -  -4.1  -4.68601   ATGTAAAACAAGAAA                GAGAA AAG TTCCC                TATCATATCTGGGCT  66 60
        lepA 2471316 .. 2471336 - -12.6  -4.14627   TCTTTACAGAAAGAA            GCCGCAGT ACAAG ACTGCGGC            GGCTTCTATTGTTTT  95 31
        hemW NONE
        hrcA 2468995 .. 2469015 - -11.9   -2.7728   CTCAAAGTGTAAGGA            GAAGGACAG GTG CTGCCCTTC            GATAAAATTTGCCAA  84 48
        grpE NONE
        dnaK 2466438 .. 2466466 - -10.4   -5.7946   CGGGCAAGAAAAAAA        GTCAAAGCCAAG AGATG CCTGACTTTGAC        TTTCTAATCATTGAA 100 103
        dnaJ 2465222 .. 2465235 -  -2.3  -2.72459   CATCCAATAATTAAT               CGCCT TTAA ACGCG                CGTTTTACCTTGTCA  40 7
        prmA NONE
HC659_RS12550 NONE
        mtaB 2462078 .. 2462099 -  -7.3  -5.63517   CGGCTAAATAAAAAA           CCGGTACAT TTTA ATGCACCGA            TTTTTTAGGTTAAGA 100 35
        rpsU NONE
HC659_RS12530 2460306 .. 2460328 - -11.4  -5.64274   TTATGTATAAAAAAA           GACATCTCTC TTA GAAAGATGTC           CTTTTCTTTGCCATT 100 40
HC659_RS12525 NONE
        floA NONE
HC659_RS12515 2457389 .. 2457430 - -13.9  -4.96848   TGCCCCATACAAAAA GAACCCCCTTTCATCTCAT ATGT ATGATTTGAAAGGAGGTTC  TAACACTTTAATTTT 100 33
        yqfC NONE
        yqfD NONE
HC659_RS12500 2454896 .. 2454921 -  -9.1  -5.00765   AAGCAATCATAAAAA         TGACCCGAT AACGCGCG ATCGGGTCA          TTCAGCATTAATTTT 100 33
        pgpH NONE
        ybeY NONE
HC659_RS12485 NONE
HC659_RS12480 NONE
HC659_RS12475 NONE
HC659_RS12470 NONE
        recO 2449135 .. 2449177 - -17.9  -5.30155   GCAGCAACCAAAAAA CTCCCGTCTCTATGCTTGC CAGCC GCAAACATAGGGACGAGAG TTCTCCCGCGGTTCC 100 227
        glyQ NONE
        glyS 2446124 .. 2446151 -  -4.1  -4.18161   TATAAATGGGGAAAA        GACGATTACCG ATCACA CAGCAACCGCC         TTTTCTCTCTTTATT  61 36
        ccpN NONE
HC659_RS12445 2444532 .. 2444552 -  -4.7  -4.70659   TGGCACAGCCAAAAA            CCCAGGA TAGAGCG TCCTGAG            TTATATGTTTTTTGT  71 26
HC659_RS12440 NONE
HC659_RS12435 NONE
        rpoD 2440616 .. 2440645 -  -8.7  -5.75342   TCTTTTTAAAAAAAA       GA-AGAACGGATCT TCA AGACCCGTTCCATC       TTATTCAAGGAAATC 100 26
        cccA 2439899 .. 2439923 -  -9.9   -5.2853   CAGTCAAAAATAAAA          GGCTGTCGAGA ACA TCTCGGCGGCC          TGTGAATGTATAAAG 100 56
HC659_RS12420 NONE
HC659_RS12415 2437907 .. 2437927 - -11.2  -5.48054   AGTAAAAGCAAAAAA            CTGAGGCT GTAAA AGCCTCAG            TTTTTTTATAGAAAT 100 31
        cshB 2434606 .. 2434617 -  -2.2  -3.15544   GCCTATTCTCAGCAA                CAGG TTCC CCTA                 CTTTCTTTTGTTAGA  43 23
HC659_RS12395 2433690 .. 2433707 -  -8.4   -5.1925   TTACAAGCTAAAAAA             TGGGGG TGTTAT CCCCCA              TTTTTTATTGCTGTA 100 30
HC659_RS12385 2432348 .. 2432382 -    -8  -4.76041   TACATGTATGAAAAA    GAAAATGGC-AGCTG TCTGTC CAGCAAGCCATTTTC     TTTACTGCAGATAAA  88 77
         zur 2431813 .. 2431847 - -14.4  -3.63341   AATACGCGTCAATAA     CTGAAAAAGGAGCCCA AAC CGGGCCCCTTTTTCAT     ATATACGCATTTTAC 100 37
HC659_RS12370 2430682 .. 2430703 - -14.5  -5.28414   GAAGAAACACAAAAA           GCTTGACGG GAAC CCGTCAAGC            TTTTTTGTGTTAGAA 100 35
        yqgA 2428337 .. 2428361 -   -10  -4.65895   GTTGCTATTTAAAAA          GCCAGGTACC AATAG GGCACCTAGC          TTTCAGAATTAAATC  91 91
HC659_RS12345 2426507 .. 2426523 -  -4.4  -2.80354   TATATGTACTGAAAT             GC-CGCT TCAC AGCGAGC              CTTTCTTCATTCAAT  48 154
HC659_RS12340 2425832 .. 2425855 - -10.4  -5.80248   GAAGACATAAAAAAA          CAAGGTCC-CA TAA TGAGGACCTTG          TTTTTGCCATTATTT 100 35
HC659_RS12335 2424384 .. 2424403 -  -5.7  -5.05113   TTTACAGAAAGAAAA            GACACTC AAGTAA GAGTGCC             AGTTTTCATTTTAAA  78 88
HC659_RS12330 2422177 .. 2422195 -   -11  -5.93809   TTTGTATAAAAAAAA             CGCCCACA TCA TGTGAGCG             TTTTTTTTAGTTATC 100 32
HC659_RS12325 NONE
        pstC NONE
        pstA NONE
HC659_RS12310 NONE
HC659_RS12305 2417618 .. 2417634 - -12.3  -5.70829   AACACGATAAAAAAA              CAGGCTG ACT CAGCCTG              TTTTTTTCATCCAAA 100 32
HC659_RS12290 NONE
HC659_RS12285 2415040 .. 2415051 -  -2.2  -3.37912   GACTTATATATAATA                CCAC TATA ATGG                 ACGGAATGCTAGGCT  45 46
        rpmG 2414783 .. 2414808 - -10.5  -5.80817   CGGAATAGAAAAAAA         GCCAGAACCTT TTTC AAAGCTCTGGC          TTTTTTCTTACACCT 100 56
HC659_RS12275 NONE
HC659_RS12270 2413932 .. 2413948 -    -8  -5.38497   ACTGAAAGCAAAAAA              TCCCGT TTTTC ACGGGA              TTTTAGAAAGCTTGC  95 28
        glpG 2412300 .. 2412317 -  -4.8  -3.53566   AGTCAAGAAGAAAAC             GCTGAC AAAAAA GCCAGC              TTCCTTTCCATATTC  57 46
HC659_RS12260 NONE
HC659_RS12255 2410988 .. 2410998 -  -2.6  -3.94333   CATTAACACATCAAA                 TTAA ATC TTAA                 CCTGAGCACAACAAA  52 64
HC659_RS12250 2408969 .. 2408996 - -10.6  -5.21683   ATTTAAAAAAAGAAA        GCCTCCCGC-TCA CTT CGATGCGGGAGAC        ATTGTGATTATGATG 100 33
HC659_RS12245 2407778 .. 2407788 -    -4  -5.24129   CTTCGGCAGAAAAAA                 GAAA AAG TTTC                 AGTTACTCATGAAAA  74 28
HC659_RS12240 NONE
HC659_RS12235 2406322 .. 2406343 - -13.1  -4.35518   AACCGCACATTAAAA           CCTGTATCC GATC GGATACAGG            TTTATTTTTATGGCT 100 33
HC659_RS12225 2405324 .. 2405348 -   -13  -4.03204   CATTAAATGCAGAAA          GAGACAAACC TTATC GGTTTGTCTC          TTTTTTTACAATGAA  95 31
        mgsR 2404410 .. 2404449 - -10.8  -4.66953   TGAACAGGTGAAAAA  CCGAAGACAAGCTGATTC GAAT AAATCAGCGGATCTTCGG   TTTTTCATCATGCAG  95 33
       rsbRD 2403336 .. 2403364 -  -9.6  -5.69379   ATAGAAGTAAAAAAA        GCTGAATAGCCC GTGAA AGGCTGTTCAGC        TGCTATCTTTCAAGA 100 58
        corA NONE
HC659_RS12190 2400683 .. 2400705 - -14.2  -5.72622   CCTATAAATAAAAAA           GCAGACATGG TCA CCATGCCTGC           TAGATTCCATTTTCA 100 41
       comGA NONE
       comGB NONE
       comGC NONE
       comGD NONE
       comGE NONE
       comGF NONE
       comGG NONE
HC659_RS12150 2396088 .. 2396109 -  -2.9  -6.00814   AAGAAGCAAAAAAAA           GGTACCCGC TTGC ACAGGTACT            GTTCAAACAAAAAGT 100 233
        tapA NONE
HC659_RS12135 2394335 .. 2394346 -  -5.8  -3.71378   GATTTTATATCGAAA                CCTG TTGC CAGG                 TTTACAACTGAAGTT  63 39
        tasA 2393460 .. 2393497 - -17.1  -2.93073   TTTTGTCAATAACCA   TCGAGACGGCCCAGTAT ATGA ATACTGGGCCGTCTCTT    TTTATGGCTGTTATT 100 39
        gcvT NONE
HC659_RS12100 NONE
HC659_RS12095 2385812 .. 2385832 - -14.1  -4.30977   AAGAAATAAAGCAAA            CAGCTGTCT GGT AGACAGCTG            TTTTTATTTATCTTT 100 33
        lipM 2384358 .. 2384371 -  -2.4  -3.43071   GTTTACACTAATGAA               CTTG AAAAAA CAAG                GATGCTCCGCGGGTC  45 52
        mntR 2383845 .. 2383866 - -10.1  -5.15634   CAGCGTATCAAAAAA           GACGGCCTC CTTC GAGACCGCC            TTTTTACTGATTATG 100 29
HC659_RS12075 2382808 .. 2382823 -  -2.5   -5.7946   TTCTCAAGAAAAAAA              GCCAG ACTCAG CTGAC               TGTTATAGAAGGGAA  93 71
HC659_RS12060 2380671 .. 2380689 -  -7.5  -5.08824   TTCTCATGTAAAAAA             TGTTCAC TTCTC GTGAACA             TTTTATCATACTGGA  93 54
        aroQ NONE
        papA 2379130 .. 2379149 -  -2.2  -2.74563   CCTATATTCCAATCA            CAAAATAA TAAG TTCTTTTG             GGGAATGGGTGATTG  40 3
         efp 2378507 .. 2378530 -   -11  -6.22802   GGGCACAAAAAAAAA          GCCTGCTCCC ATTT GGGAACAGAC           TTCTTTTTTTCTTTC 100 40
HC659_RS12040 NONE
    spoIIIAA NONE
HC659_RS12030 NONE
    spoIIIAC NONE
    spoIIIAD NONE
    spoIIIAE NONE
    spoIIIAF NONE
    spoIIIAG NONE
    spoIIIAH 2372747 .. 2372765 - -11.7  -4.76892   ACAGCAACGCAAAAA             GCCCGCT TGTTT AGCGGGC             TTTTTTCCCTCATTC 100 41
        accB NONE
        accC NONE
        yqhY 2370316 .. 2370338 -    -7  -5.43866   TAACGTGTAAAAAAA           CCAAAGGG CCGCCCT CCCCTTGG           TTTCGTGTTAAGCCA 100 42
        nusB NONE
        folD NONE
HC659_RS11970 NONE
HC659_RS11965 NONE
HC659_RS11960 2366037 .. 2366051 -  -6.4  -4.42386   CCTGTATTGATAAAA               GATCCA AAG CGGATC               AACTCACTTTCAGCA  76 192
HC659_RS11955 NONE
HC659_RS11950 2363283 .. 2363306 - -11.2  -5.31456   TGAATGCAGAAAAAA          GGAATAATAG CGCC CTATTATTCC           GGTACATCTGCTTTT 100 19
        argR NONE
        recN 2360964 .. 2360988 - -14.4  -5.52384   TGTGCACGAAAAAAA          TAAGCTGCGC TTCTC GCGCAGCTTA          CCCAGTTGTTTTGAC 100 23
      spoIVB 2359512 .. 2359530 - -14.6  -6.11229   ATCAAAATAAAAAAA             CTGCCGGA AAC TCCGGCAG             TCAGCTTGCTTTTTC 100 26
       spo0A 2358380 .. 2358419 -  -8.8  -5.07652   GTCCCCAAAACAAAA  CGCCTCCTATTTATCAGC GCAA ACTAATAAATAAAAGACG   TTTGATTTAATGACC 100 58
HC659_RS11915 NONE
HC659_RS11910 NONE
HC659_RS11905 2354566 .. 2354588 -  -7.7  -5.32565   GAATGAATGAAAAAA           GAAGGCTGC GTCAA ACAGCCTCC           TTCTAACAACTATTC  95 35
HC659_RS11900 NONE
HC659_RS11895 2352398 .. 2352411 -  -5.3  -3.08679   CCCCCGGATGGAATA               GACTT CAGG AAGTC                TTCTCCTCATAGTCA  53 16
HC659_RS11890 NONE
        mmgD NONE
HC659_RS11880 NONE
        prpB 2347697 .. 2347714 - -12.7  -5.45726   GATAGCTGAAAAAAA             GCCGGAG AATG CTCCGGC              TTTTTTTGTTGCATT 100 39
HC659_RS11865 NONE
        yqiS NONE
HC659_RS11855 NONE
HC659_RS11850 NONE
        lpdA 2340545 .. 2340555 -  -6.8  -3.80855   GCTTTTAAAAATGAA                 TGGC TTT GCCA                 TCTGCGGCAAGCGCT  66 4
      bfmBAA NONE
HC659_RS11835 NONE
       bfmBB 2337180 .. 2337214 - -14.6   -5.2015   TGAATAATAGAAAAA     GAGCATTTTTTGAAAC AAA ACTTCAAAAAATGCTC     TTTTTTCTTATTTAG 100 37
        brxB 2333468 .. 2333491 -  -7.4  -5.64274   TTATGCACAAAAAAA          CCCGGGCTGCT TTG AGCATCC-GGG          TTGTTCGTCTTATAC 100 35
        artP 2332436 .. 2332457 - -10.2  -5.10461   CCTATTCAATAAAAA           GGCTCAAC GAAAAA GTTGAGCC            GCTTTTTTTTACTTC 100 34
        artQ NONE
        artR 2330978 .. 2330999 -  -5.2   -5.4505   TTCTTCAATAAAAAA           GAAG-AGGC GGCCA GCCTTCTTC           TTTTTTATATTCTAT  88 37
HC659_RS11790 2329916 .. 2329969 -  -7.1  -5.64304   GAACATAAGAAAAAA CGCATAAGCTCCTCCTTTTTCATTAG GTTGA CCAATGAA---GGAAGAGCTCATGCG AATCATCCGAGTGAT 100 28
HC659_RS11785 2329354 .. 2329373 -  -2.9  -3.15544   CTGTACTCTCAGGAA            TCGTCAT GTTTCT ATAACGA             TAAAAAAGCAGGCGC  45 42
         mce NONE
HC659_RS11770 2327256 .. 2327268 -  -7.7  -2.89602   CCCTCCATATTAAAG                CGGTA TGT TACCG                TGCTTTTTTTTCGGT  64 7
HC659_RS11765 2326082 .. 2326092 -  -2.4  -5.47821   ATGGAGCTAAAAAAA                 CCTG ATG CGGG                 AAATCGCACTCGGGT  76 50
HC659_RS11745 2322723 .. 2322733 -  -2.6  -4.17023   TTAATCATTTTAAAA                 TTTA AAT TAAA                 ATAAAATGATATTTA  55 84
        gndA 2321237 .. 2321262 - -13.3  -4.92757   TCATTAATAACAAAA         CCCCCGAAGCT CTAT AGCTTTGGGGG          TTTCTATTGATTACT 100 36
HC659_RS11730 2318264 .. 2318289 -  -4.7  -5.54192   ATTAACGTAAAAAAA         GACCGGG CCGTAAGGGATT CCCGGTC          TTTTATATTATTTTG  88 265
HC659_RS11710 2314526 .. 2314546 - -14.1  -4.98857   ATGTAAGGACAAAAA            CAGAAGGCA CAG TGCCTTCTG            TTTTTTATTTTTCCC 100 30
HC659_RS11700 NONE
HC659_RS11695 2311429 .. 2311458 -  -2.2  -2.55378   AAGCAGAGCATGAAG       GACTTCTGAATG AACTGA CATTCAACAATC        TCTCCCTTCCACTAT  40 92
        dsdA 2310062 .. 2310082 -  -6.9  -4.13767   CTCTGTAGGTTAAAA            CCCTTACAA AGA TTGTAACGG            AAAACCTTTTCACTG  73 46
        coaA NONE
HC659_RS11680 2308484 .. 2308506 -    -7  -5.36441   GCTTTACATAAAAAA           CGGAAGAG AATGAAA CTCTCCCG           CAAACATGAGGTGAA  95 200
HC659_RS11660 NONE
HC659_RS11655 2304605 .. 2304617 -  -3.5  -3.28712   CTCTTTTTCTCACAA                TATAA AAA TTATA                TTTTGCCTGGCTGGA  47 143
HC659_RS11650 NONE
HC659_RS11645 NONE
HC659_RS11640 NONE
HC659_RS11635 NONE
HC659_RS11630 2302094 .. 2302119 -  -9.8  -5.64304   CAACAGAATAAAAAA         GCGAAAG-GCC TCTTC GGCTCTTTCGC         TTTTTTATGTTACAG 100 35
HC659_RS11620 2300765 .. 2300786 - -11.6  -4.95155   CTCATAGCAGAAAAA           CCAGCACC TGTACG GGTGCTGG            TTTATTTATATTGAT 100 27
HC659_RS11605 NONE
HC659_RS11600 2297703 .. 2297743 - -11.9  -3.35964   CGAGAAACAAAAGCA GACTGCTCCTCA-GGCCA TAGAAT TGGCCACGTGGAGCAGCC  TTGACTTTACCATTT  85 141
        ansA NONE
        aspA 2294804 .. 2294841 - -10.2  -3.55444   TCCCTATGTTGTAAA  CAGCTTATTCA--TCCGA CTAT TCGGAGATGAATAAGCTG   TATTTTATACAAATT  80 41
        mleN NONE
HC659_RS11575 2291938 .. 2291961 - -13.2  -5.89921   ATGATAAGAAAAAAA          CAGCACCTGC TACG ACAGGTGCTG           TTTAGCTACATTTAT 100 37
HC659_RS11570 NONE
      spoIIM NONE
         fur 2290313 .. 2290333 -  -8.3  -5.34055   AGAAACAGCAAAAAA            CCCTTTCCC CAT GAGAAAAGG            TTCGCGCTCGGCACC 100 43
HC659_RS11555 NONE
        xerD 2289084 .. 2289101 - -12.7  -5.63517   GCTCTAAACAAAAAA             GCCGCAG CCAC CTGCGGC              TATGCTCGCGGATGA 100 25
        deoB NONE
HC659_RS11540 2286874 .. 2286903 - -12.3  -5.24129   TTTGGGCATAAAAAA       GACAGCTGTGT GATATCAG ACACAGCTGTC        TTTTGGTCCTGCATT 100 50
HC659_RS11535 2285562 .. 2285573 -    -3  -3.06183   TCGATTTCGACGGAA                TGAA TTCC TTCA                 CCGTGACAAAACTAG  43 57
     spoIIAA NONE
     spoIIAB 2284726 .. 2284737 -    -3   -2.7186   AAATCTCCTTAATTA                CAAA GCGC TTTG                 CTTTTTGATAAGTGC  41 7
        sigF 2283922 .. 2283944 - -14.2  -5.36441   TTTGCACACAAAAAA           GCTAGCCTGC ACT GCAGACTAGC           CATCCGTATGATCCA 100 21
      spoVAA 2283198 .. 2283210 -  -3.4  -2.64704   GAACAATACACTAAC                GATC ATGCA GATC                CTTTATGGTTTCTTG  43 8
      spoVAB NONE
      spoVAC NONE
      spoVAD 2281290 .. 2281302 -  -3.4  -3.06162   TAGTCCATGTTAAGA                TGCA CCTCC TGCA                CGCTCAAATACAACC  45 7
      spoVAE NONE
     spoVAEA NONE
      spoVAF 2278809 .. 2278829 -  -6.9  -3.76224   CGCTTATGGATGAAA            GGACAGT TTTATGG ACTGTCC            CTTCATAATTAAGAC  69 77
        lysA 2277432 .. 2277449 - -12.7  -4.50358   ATTCAAATAGGAAAA             GCGCCGA AAAA TCGGCGC              TTTCTTTTATTGCTT 100 32
HC659_RS11470 2275834 .. 2275854 - -14.1   -5.7946   TGGCCAATAAAAAAA            GCTTCCTCT CTA AGAGGAAGC            CTTTTGCCTGCCGAT 100 40
HC659_RS11460 2274324 .. 2274337 -  -5.3  -6.08342   TAATAAACAAAAAAA               TGCAA CAGT TTGCA                GACGCGTCTTGTGAG  95 340
HC659_RS11455 2273438 .. 2273448 -  -3.2  -5.86332   CGAATCGAAAAAAAA                 TCCC ATT AGGA                 CCATTGAAGTGATTT  88 402
        lepB 2272799 .. 2272818 -   -10  -5.53079   AAAAGATATAAAAAA            GCAGCCTC TCGG GAAGCTGC             TTGATCCTAATTTGT 100 32
HC659_RS11440 2272212 .. 2272248 - -16.1  -4.88388   ACAATTTGAGAAAAA    CAAAACATCACCCTTCG ATC CGAAAGGTGATGTTTTT    TAATCATTCACTTTT 100 25
        ribD NONE
        ribE NONE
HC659_RS11425 NONE
        ribH NONE
        ribT 2267892 .. 2267915 - -16.8  -5.97575   AACGCAGAAAAAAAA          GCAGAGGCTG ATGA CAGCCTCTGC           TTAATTATTGTATGA 100 26
        scpA NONE
        scpB NONE
HC659_RS11395 2265138 .. 2265158 - -11.2  -5.88197   GCAAACATAAAAAAA            CTCTCCCT GAAAA AGGGAGAG            TAAACGTTATCTGAT 100 32
HC659_RS11390 NONE
        spmA NONE
        spmB 2262767 .. 2262781 -  -4.2  -5.89947   CAAATCTAAAAAAAA               CGCC GTTTTCA GGCG               CTCCCAAATAATAAC  91 19
        rluB NONE
        resA NONE
        resB NONE
        resC NONE
        resD NONE
        resE 2255863 .. 2255883 - -12.6  -5.52384   TGGCTATTAAAAAAA            CACCCGCT CAGTC AGCGGGTG            TTTCTTATGGAACAA 100 68
        sigX NONE
        rsiX 2254077 .. 2254092 -  -6.1  -5.31059   ATAGCAACTAAAAAA              GAGCC TTAAAG GGCTC               TTTTTAGTTTAAGGA  89 29
HC659_RS11335 2253184 .. 2253203 - -10.8  -5.68023   CCATAATTAAAAAAA            CTCAAGCT ATAT AGCTTGAG             TTTTTTTATTGTTCT 100 39
        fmnP 2250504 .. 2250519 - -10.4  -5.66868   AAGTAACTAAAAAAA              GCTCCC GAAC GGGAGC               TTTTTTATTTAATGG 100 34
HC659_RS11315 NONE
HC659_RS11310 NONE
HC659_RS11305 NONE
HC659_RS11300 NONE
HC659_RS11295 2245564 .. 2245575 -    -3  -3.29144   CCATTCTTTTTAGAA                CTTA TCAA TAAG                 ACGGACAATAAAAAA  46 75
HC659_RS11290 2244633 .. 2244652 -  -6.6  -4.04206   CTACTTGCACACAAA            TCATATAA CACA TTATATGA             GATGATGAGTCATAG  70 132
HC659_RS11285 2243985 .. 2244000 -    -9  -5.95166   TTTAACGAAAAAAAA              CTGCTG AAAT CAGCAG               TTTTCCGTTGCATTC 100 41
        gudB 2242537 .. 2242558 -  -7.4   -5.7946   TTCCGAATAAAAAAA           TCTCCTAT TTTATC ATAGGAGA            TTTTTTATTTTTATG 100 53
        ypdA 2241471 .. 2241495 -  -9.4  -5.86609   TTAAAAAAACAAAAA          GAGCATACGA ATGCA TCATATGCTC          CTCATCTTTAATGGT 100 33
        prsW 2240704 .. 2240724 - -12.5  -5.37043   ACTGCACACAAAAAA            GCCGCACGG TTG CTGTGCGGC            TTCTATACTTGCATC 100 28
        sleB NONE
        ypeB 2238253 .. 2238275 -  -8.5  -5.64006   ACGTAATGAAAAAAA           GGAAAAGAC ATTTA GTCCTTTCC           TCCTGTTTTTATAGG 100 34
        dgrA NONE
HC659_RS11250 2237322 .. 2237338 -  -3.7  -2.73203   TGATGAATAATTAAT              GTTTGAA GGT TTCAATC              CTATTGTTTTCCTCC  45 4
HC659_RS11245 2236432 .. 2236456 -  -9.5  -4.01902   ATATGTATTAAAGAA          TCATCCAAAAA AGT TTTTTGAATGA          TCAATAAAAAGTTTT  85 133
        rpsA NONE
HC659_RS11235 2234087 .. 2234111 -  -9.4  -5.16133   ATCATAATACAAAAA         GCCC-AAACCA CATA TGGTTTTGGGC          TTTTATCATTTATCG 100 35
HC659_RS11225 NONE
HC659_RS11220 NONE
HC659_RS11215 2232127 .. 2232142 -    -9  -4.72007   TTTTATGAAAAGAAA              CCCTTC AGAG GAAGGG               CTTAACTCATTTATT 100 72
        engA NONE
        gpsA 2229440 .. 2229469 -  -9.4   -5.9218   GATAGAACAAAAAAA       CTGAAGCAAAGA GGGGGA CCTTCGCTTCAG        TCAACTTGACTATAT 100 226
HC659_RS11200 NONE
HC659_RS11195 2228339 .. 2228371 -  -9.3  -5.82172   ATTAATATAAAAAAA      CCTTTCTCCCT ATTTGTATGCA AGGGAGAAAGG      TTCATTCCTTTTTCA 100 27
      spoIVA 2226682 .. 2226705 -  -3.2  -5.69793   AGAGCAAAGAAAAAA          GACCTC-CCAT TCT ATAAAGAGGTC          TACCGGTATTACAGG  84 34
         hbs 2225980 .. 2226008 - -14.7  -3.34715   CATGCTCTTGAAATA        TGAAAAGCCCCTT AGA AAGGGGCTTTTCT        GTGAAGAAATAAAGT 100 79
        folE NONE
        mtrB 2225038 .. 2225052 -  -2.7  -3.01924   CATTTGCTTTTAACA               GCGGG GACAG CCAGC               TTATTTTTTTTCGCT  43 26
HC659_RS11170 NONE
        menG NONE
        hepT 2222401 .. 2222411 -  -6.8  -3.48064   CTGATAATTAATCAA                 TCCG GGG CGGA                 GAAATTTCTTAATAT  64 52
         ndk 2221715 .. 2221730 -  -7.6   -5.7946   GTTTCAATAAAAAAA              TCAGCT TTTC AGCTGA               TTTTAGATCGTTGGG 100 166
        cheR 2220844 .. 2220857 -  -2.5  -3.21036   GACTACTATAACATA               TTTTT CAGC AAAAA                GTCAGTCTATCTTTT  45 32
        aroC NONE
HC659_RS11140 NONE
        aroH 2218005 .. 2218028 - -12.6  -4.76087   TATATAACAAATAAA          CCCAAAAGAA AGAC TTCTTTTGGG           TAGAATAAACATAAT 100 146
HC659_RS11130 NONE
        trpD NONE
        trpC NONE
HC659_RS11115 NONE
        trpB NONE
HC659_RS11105 NONE
HC659_RS11100 2210908 .. 2210928 -  -9.8  -3.88498   GGTTTATAGACTAAA            GAGGTGAT ATTTG ATCACCTC            TTATAAAATTTCAGC  85 26
HC659_RS11095 NONE
        aroA 2208453 .. 2208473 - -12.7    -5.252   GATCTGCATAAAAAA            TCCTGAAGT AAA ACTTCAGGA            TTTTTTCGAAAGCTT 100 20
HC659_RS11085 NONE
HC659_RS11080 2206221 .. 2206242 - -10.9  -3.65046   CCTTTACGGCAACAA           GCCTTGCAA TTCA CTGCAAGGC            TGGTCATATTATGTG  88 34
HC659_RS11075 NONE
HC659_RS11070 NONE
        qcrB NONE
HC659_RS11060 2203563 .. 2203579 -    -8  -5.63517   TGTCCAAATAAAAAA              GCTGAC GCCGG GTCAGC              TTTTGATAATAAAAG 100 72
HC659_RS11055 NONE
        ypjB 2202034 .. 2202050 - -10.8  -5.48063   ATGTAATAGAAAAAA              GGCGGC TGACC GCCGCC              CCTCATCCTTATTTA 100 34
HC659_RS11040 NONE
HC659_RS11035 2199830 .. 2199841 -    -3   -2.8372   CATGCGCGATCAAAG                CAAT TTTC ATTG                 TTTATCCCCCCGTCT  42 39
        mgsA NONE
       bshB1 NONE
        bshA NONE
HC659_RS11015 NONE
HC659_RS11010 2195248 .. 2195268 -  -6.2  -5.15969   CTGCAAGCCAAAAAA           CCTTC-CGT TACA ACGAGAAGG            ATTCTTCACTTTCTA  83 190
        panB NONE
        panC NONE
        panD 2193083 .. 2193098 -  -7.5  -5.10163   AATCTTAAAAGAAAA              CCCCC GATAAA GGGGG               CTTTTCTTCTACAAA  93 34
        dinG 2190169 .. 2190183 -  -8.5  -4.16943   TCCCACACCGCAAAA               GCCGC TTTAT GCGGC               TTTTATTCTTTTTCC  79 28
HC659_RS10985 NONE
HC659_RS10980 NONE
        aspB 2188144 .. 2188163 -  -6.4  -5.00642   CAATGCAGATAAAAA            GCGGCT TTTCTGTC AGCCGC             TTTTTGATCTGTTAG  82 37
        asnS 2186697 .. 2186714 -  -7.7  -4.62069   CCTTTACTGTAAAAA             GTCTCCC TTGC AGGAGAC              TCTTTTTTGTTTCAT  84 50
        dnaD NONE
         nth NONE
HC659_RS10955 2184757 .. 2184776 -   -10  -5.60689   GTACACAATAAAAAA            CCTCCCGT TTTA ACAGGAGG             TTTTATCGATTCATC 100 28
HC659_RS10940 2180290 .. 2180312 -   -15  -3.05384   CGCCCTTCTACGTAA           GAAGCAAGGA ATT TCCTTGCTTC           TTTATTTTTTCAGCC 100 27
HC659_RS10930 2179744 .. 2179754 -  -2.4  -2.71325   TCACTCACAAATTCA                 GCCG ATG CGGT                 ATACCTTCTCAAACG  40 12
HC659_RS10925 2179306 .. 2179343 - -10.1  -4.82901   GGCCCCCTATAAAAA   CGAAAAGAAGACAGCC TTTTACC GGCTGTCTTCTCTT-G   CAATTTCATCCTTTA 100 6
HC659_RS10915 2178499 .. 2178529 - -12.8  -5.00616   TTTCTTTCCAAAAAA       TAAGCATGAATGAA CGA TTCATTCATGCTTC       TATCATTTAAAAAAG 100 28
HC659_RS10905 2177430 .. 2177447 -  -9.1  -5.80364   AGTTGAATAAAAAAA             GCAAGGC ATAC GCCCTGC              TTATTTCGCTTTTAT 100 26
HC659_RS10900 NONE
HC659_RS10895 2173843 .. 2173857 -  -8.6   -3.1855   CCGGGGAATATTTAA               GAGGAA TAT TTCCTC               TTCAGCCGGGCAATT  71 7
HC659_RS10890 NONE
        cotD 2173233 .. 2173252 -   -10  -5.00884   ACCTGCTTTAAAAAA            TGGGGCTCC CGT GG-GCCCCA            TTTGTTGTGCTACAT 100 73
HC659_RS10880 NONE
        gpsB 2172241 .. 2172251 -  -2.6  -3.46509   CGTTAAGAACATGAA                 TTAT TAT ATAA                 CAACTGATTACAATT  46 68
        rnpB 2171791 .. 2171811 -  -8.3  -4.66537   CTTTTCAAGATAAAA            GCTCTCC TTATACG GGAGAGC            TTGTTTTCATCATTT  88 61
HC659_RS10865 2170563 .. 2170585 -  -9.2  -4.00532   GGCTGAAAGATGAAA           GAAGACGC ATGCAGA GCGTCTTC           TTTTTATGCGTTTTC  85 29
HC659_RS10855 2170003 .. 2170017 -   -10  -5.94214   AATACAATAAAAAAA               CTTGGC AAT GCCAAG               TTTTTTGCAGTTTAC 100 37
HC659_RS10850 2167972 .. 2167991 - -12.2  -5.72622   CTGACAAATAAAAAA            GCTGACGA ACGA TCGTCAGC             TTTTTTCCATTACAT 100 35
        kdgR NONE
HC659_RS10830 NONE
         eda NONE
        kdgT 2162456 .. 2162481 -  -4.7  -4.37092   ATTGTTTGTATAAAA         GGCTGCC GGTATGTTTTGT GGCAGCC          TTTTTATTCAGTTGA  68 33
        ypwA 2160843 .. 2160865 - -13.4  -3.88029   ATTCGATATAAAAGA           GCCTGACGAC CGC GCCGCCAGGC           TTTTGATTATGACAG 100 32
         xpt NONE
        pbuX 2158627 .. 2158642 - -10.4  -5.50499   TTATATGCAAAAAAA              CTCCGC CGCG GCGGAG               TTAGACTGCTGTTTT 100 26
HC659_RS10800 NONE
        bpsB 2156951 .. 2156961 -    -4  -2.58427   AACATGGTTGAGAAT                 GATT TTC AATC                 GCTATTTTACGCTGT  45 27
        fbpC 2156743 .. 2156759 -  -7.9   -5.5208   GGAGAATAGAAAAAA              GCCGCCA TTA CGGCAGC              TTCTATAAAAGAAAA 100 69
        dynA NONE
HC659_RS10780 NONE
HC659_RS10775 2152465 .. 2152490 - -10.6  -5.93252   CCCAAAAATAAAAAA         CAGTATCTCT TTAATT AGAGATACTG          TTTGAATATTTATCA 100 38
HC659_RS10770 2151499 .. 2151530 - -12.5  -4.77629   AAAAGCAATACAAAA      CGCTAGAGAGGATC TAAAC GATC-TCTCTAGCG      TTCAGCTTTTCAAGC 100 7
HC659_RS10750 NONE
HC659_RS10745 2149279 .. 2149305 - -16.8  -4.02051   GATGAATTCAAAGAA         TAAAAACCGCAG CTT CTGCGGTTTTTA         TTTTTAGTGATTGGT 100 29
        degR 2148655 .. 2148674 - -13.6  -3.37299   GAGATGACAAATAGA            GGAGAGGC ATTC GCCTCTCC             TATTTGATTTTCATC 100 25
HC659_RS10710 NONE
        hdhQ NONE
HC659_RS10700 2143198 .. 2143251 -  -9.2   -4.8543   TAATTTTTATAAAAA GCGAATTCACATAAAAAAAGGTGCA TGATC TGCACC-TTTTTTATCTCTATTCGC CTTTTTTTCTGCTTT 100 18
        ilvD 2141176 .. 2141224 -  -9.2  -5.72616   ATTGACATAAAAAAA GCCCCCTC--TAGTATCCTTCA TCTGAAG TAAAGGATACTATAGAGAGGGC CGGATTTCAAATGTT 100 78
        brxA 2140716 .. 2140732 -  -9.4  -5.26119   CTCCCAAAAAGAAAA              TGCCCG GAAAA CGGGCA              TTTAGCAGTGCGCAT 100 27
HC659_RS10685 2139905 .. 2139926 - -14.5  -4.24075   ACCGATTAACAGAAA           GCCCGTGAT ATGA ATCACGGGC            TTGTTTGAATGACGC 100 18
HC659_RS10680 NONE
HC659_RS10675 2138464 .. 2138485 - -10.3  -5.64304   TAACACAATAAAAAA           TCATTTCTG AACC CAGAAATGA            TTTTTTTATAGTCAG 100 37
HC659_RS10670 NONE
HC659_RS10665 NONE
HC659_RS10660 2136469 .. 2136489 - -12.6  -4.73094   AACAGTAACAGAAAA            GCGCAGTC TTCAC GACTGCGC            TTTTTTTATGCACGT 100 31
        ilvA 2133237 .. 2133253 -  -2.1  -2.71268   TTCTATTATATATGA              TGCCAGC CGG GCTGTCT              GTCATTTTGCGCGGT  40 53
HC659_RS10640 2132885 .. 2132930 -  -6.9  -5.86965   ACTGAGCAAAAAAAA TCCTGCATGCCTCCCCATTA ACGATTA CAAAGGAG-GGCATGCAGGT AAAAAACGGCATGTT 100 39
        scuA NONE
HC659_RS10630 NONE
HC659_RS10625 NONE
        ypmT 2130565 .. 2130584 -  -2.1  -5.15634   GACCGCACGAAAAAA            GAGACGT TGTTTC ATGTCTC             TTTTTTCATGACTTA  69 31
HC659_RS10615 2129138 .. 2129163 - -10.5   -5.4477   AAACGGTGAAAAAAA         GCACATACCGA TATA TAGGTATGTGC          TTTTCGCAGTGCTTC 100 43
        msrA NONE
        msrB 2127566 .. 2127594 -  -9.6  -4.98758   AAAAAGGCATAAAAA        CAAGCCTGTCTA TCCAT TAGGCAGGCCTG        TTTTTAACAGTTTAT 100 37
HC659_RS10590 2124994 .. 2125010 -    -8  -5.38047   TATTCATAGAAAAAA              GCAGCT GCACA AGCTGC              TTTCTATTCTAGCCG  95 34
        cgeC 2123044 .. 2123066 -  -6.9  -5.19879   CGTCAAACATAAAAA           CGGCTCCGC AGCAA GCAGAGCCT           CTGTCATCATTTAAA  90 36
        cgeD NONE
        cgeE 2120875 .. 2120889 -  -4.2  -2.96216   TCTTATCACGATATA               CGGCAT TTT ATGCGG               GCCAAGTCCCAAATG  50 60
        yoyG NONE
HC659_RS10555 NONE
HC659_RS10550 NONE
HC659_RS10545 NONE
HC659_RS10540 NONE
HC659_RS10535 NONE
        ablB 2115769 .. 2115785 -  -2.3  -2.62184   TTTCGGTTTATACCA              TTTGTTT TTC AAACGAA              TTCCTCCTCGCGCAT  40 49
        ablA NONE
HC659_RS10520 2114086 .. 2114102 -    -3  -3.48144   AAGAATACTGAAACA              TGACTC AGGAG AAGTCA              AAATAGTTGCGTTTC  48 13
HC659_RS10515 2113750 .. 2113767 - -11.3  -5.71712   GGGGACATAAAAAAA             TCCGCAG TTAT CTGCGGA              TGAAACAGCTATTAT 100 37
HC659_RS10510 NONE
HC659_RS10500 2112483 .. 2112511 - -16.2  -3.84873   ATAGAACATGAATAA        TAAAACCGGAGC TGACC GCTCCGGTTTTA        AGCCTCACTCATCTT 100 30
        pgpB NONE
        yodL 2111426 .. 2111441 - -10.4  -4.46581   TAAAACTGCAGAAAA              CTGCGG GTTT CCGCAG               TTTTCTTTTCATTAT  95 37
        deoD 2110349 .. 2110374 - -11.9  -4.09117   CGCATTCATAAAGAA         GAGGC-TGCCGG CAC CCAGCACGCCTC         TTGATATATTTTATT  93 36
        ldcB 2109448 .. 2109472 - -11.5  -3.52717   ACCAGACACAATGAA          GCCCGCTTA TCTAGTG TAAGCGGGC          TTTTCATTTTAAATT  87 34
HC659_RS10460 2106788 .. 2106810 - -17.8  -5.60993   GGGCGCATAAAAAAA           CCATACGCGG CAG CCGCGTATGG           TTTTTTTTACATTTC 100 32
HC659_RS10445 NONE
HC659_RS10440 2103349 .. 2103373 - -15.1  -4.84274   TAAGGATATGAAAAA          CCTTAGTCCGA AAT CCGGACTAAGG          TTTTTTTATACAATC 100 31
        yodB 2101878 .. 2101908 - -13.4  -5.93809   TCCCCACAAAAAAAA       GAAGAGAGAGCTCC AAA GAAGCTCTCTCTTT       TTTCATAAATGCGGA 100 377
HC659_RS10420 NONE
HC659_RS10415 2099414 .. 2099436 - -14.9  -5.26316   TCATCCGATAAAAAA           CGGCCTGCA ATCGA TGCAGGCCG           TTTTTTATTAATAGA 100 33
        rarD 2097937 .. 2097959 -  -3.4  -3.93061   AGCTGAAAAGCCAAA           GGCCTCAA TGGCTTT TTGACGCC           CGTTTCCACTTCACT  55 7
HC659_RS10400 NONE
HC659_RS10395 NONE
       bshB2 2096524 .. 2096548 -   -13  -5.46698   CTTAAAATTAAAAAA          GGTATAAGGC TTAAG GCCTTATACC          TTTTTGATTAATCAT 100 33
HC659_RS10375 2093327 .. 2093348 -  -8.1   -5.0916   TCTTCAAGACAAAAA           GCATTCAGCT TGA AGC-GAATGC           TTTAATAAAGATACG 100 96
HC659_RS10370 2091934 .. 2091958 -   -13  -4.71482   ATGAAATGGCAAAAA          GCCTGTTCTT TCGAT AAGAACAGGC          TTTTACACTATGCAT 100 33
HC659_RS10365 2090322 .. 2090334 -  -4.8  -5.72622   GGTATAAACAAAAAA                GCCT ATAAA AGGC                TTTTTGTCATACTCA  88 44
HC659_RS10360 NONE
HC659_RS10355 2088702 .. 2088712 -  -5.4  -3.64703   GCCCCCTCATTCAAA                 CAGA GTT TCTG                 CAATATTTCGGACAG  60 6
HC659_RS10350 2086751 .. 2086776 -  -7.7   -4.7339   AACAAACGCCAAAAA         GCATAGGAT TAAGGGCT ATCCTATGC          TTTTATGAAGCAGTT  88 15
        sucA NONE
        odhB 2082400 .. 2082425 -   -12  -5.17353   ATATGCATCAAAAAA         GGTACATCAC TTTATC GTGATGTACC          CTTTTTTATTATCCT 100 34
HC659_RS10330 2079836 .. 2079854 -  -8.8  -5.52384   GCTCTATTAAAAAAA             GCCCCC TTTCCCC GGGGGC             TCCGTGTTTTAAAAA 100 34
HC659_RS10310 2075007 .. 2075023 - -13.7  -5.71983   TTAACCACAAAAAAA              CCGCAGC TGA GCTGCGG              TTTTATGTATCGACT 100 78
HC659_RS10305 2074293 .. 2074316 - -12.5  -3.61517   AGTGTGGTGTAATAA          GAACAGGGC GCACAT GCCCTGTTC           TTGTTTTTATATATA  95 84
HC659_RS10290 NONE
HC659_RS10280 NONE
HC659_RS10275 2072017 .. 2072045 -  -8.9  -5.75342   TTTTTTCAAAAAAAA        GCAAGTACATCTA ATA TCGGTGTACTTGC        TTGGCATTTTTACTT 100 35
HC659_RS10270 2071243 .. 2071268 -  -7.7  -5.03994   GTGTATATACAAAAA         GACTCCTAT TTGTAACG ATAGGAGTC          TTGGCTTTATTAGAA  89 35
        ssrS 2070835 .. 2070857 - -12.1  -5.58522   TAGATAAAATAAAAA           GCCATTTCC GAAAA GGAAATGGC           TTTCGCTACGTCTTG 100 24
        recQ NONE
HC659_RS10255 2067785 .. 2067807 -  -9.2  -5.89921   AGCAGAACAAAAAAA           GACACAAGCC AAA AGCTTATGTC           TTTTATCACAATCTA 100 46
HC659_RS10225 2061640 .. 2061663 - -14.6  -3.66139   TAGACACACTTCAAA          GGCCGGAGGCT ATT AGCC-CCGGCC          TGTTAGGTTTACGCC 100 34
HC659_RS10220 2060980 .. 2060996 - -10.9  -5.50499   TTACACGTAAAAAAA              GCCATAC TGA GTATGGC              TTTTAATAATACGGT 100 28
        czrA 2059671 .. 2059710 -  -4.4  -5.50774   TACAATAAAGAAAAA  GACATCCTTGCCC-GCT AACAGCG AGTTAAGCAAGGATGTC  TTTTTCAATCATGCT  84 30
HC659_RS10200 2057977 .. 2058004 - -12.9  -4.16904   AAGATTATAGACAAA        GAAACCTGACA GCAGTG TGTCAGGTTTC         ATATATTTTTTGCAT  95 17
HC659_RS10195 2057407 .. 2057444 - -14.5  -5.06414   TCCTCCTAACAAAAA   CTAATGGTGTTAGTT TTATTATT AACTAACACCATTAG    TTTTTCAAGAGTTTA 100 41
HC659_RS10190 NONE
HC659_RS10185 NONE
HC659_RS10180 NONE
HC659_RS10175 2054521 .. 2054535 -  -2.9  -2.63455   GGAGATATACAATAT               TCTTT TAACT AAAGA               GCCATCATTTTTTAT  41 30
        csaA 2054110 .. 2054132 - -16.4  -3.76373   GCCTCAATACGCAAA           GACGTTTGCC TTA GGCAAACGTC           TTTTTTTGCGTTATC 100 36
HC659_RS10155 2048554 .. 2048572 -  -9.6   -5.2015   TGAATAACAGAAAAA             GACAGCCA AAA TGACTGTC             TTATACATCACACAC 100 40
        yobL NONE
        yobK 2046126 .. 2046158 - -15.9  -3.19936   AATTATTTAATCCAA      TAAAATAAGCTCTCA TTG CGAGAGCTTATTTTA      TTTAGATTGAGGATG 100 82
HC659_RS10140 2044661 .. 2044681 - -10.5  -5.48063   ATTGAATACAAAAAA            GAACCTGCA TTT TGCAAGTTC            CTTTCACGTTGTCAA 100 517
HC659_RS10130 2043939 .. 2043964 -  -4.2  -2.94137   AACCACTGCACAAAT         TTTTTTTTGA TTTCCC CCAAAAAAAA          CAAATCCTTTCTAAA  50 252
HC659_RS10125 2040220 .. 2040232 -  -3.5  -4.90013   GAAGCCAAGGAAAAA                TATAA GAT TTATA                TATTCAAGGATGATA  72 146
HC659_RS10115 2039167 .. 2039187 -  -6.9  -3.15249   CACATTTTTCAGGAA            CAAATCTGT AAA ACAGCTTTG            TAATCTCAGTTGAAA  63 307
HC659_RS10085 2034968 .. 2034987 -    -5  -2.91593   GATCTTTTTACAAAT            TGGACTTT TGAT AAAGTCCT             GGATTATACACTAGC  50 204
HC659_RS10075 2034568 .. 2034579 -  -2.2  -2.54059   TATATACACTAACAT                CACC TCCG GGTA                 GATAAGTTAACCTTA  40 66
HC659_RS10070 2033416 .. 2033454 -  -9.8  -2.87683   ATATCGCTTTATATA  CCACCTCCT-CTTAG CTAATATGTT CTAAGTAGGAGGTGG   TATTTTGTTTGTATC  75 215
HC659_RS10055 2031550 .. 2031563 -  -8.1  -5.39221   ACAACAATTAAAAAA               GCCCT CATA AGGGC                TTTTGCATAAAACAA 100 41
HC659_RS10045 2030306 .. 2030330 - -11.7  -4.51363   GAGCAAATATTAAAA          GTATTTGTAAT TCA ATTACAAATAC          CTAGAAACACATTAT  95 492
        xynA 2029006 .. 2029030 -  -9.4   -5.0916   TGTGCAATATAAAAA         GAACCTGG-GA AATT TCACCAGGTTC          TTTTCTTAATTTCCA 100 523
        ppsA 2025891 .. 2025906 -    -9  -4.02132   GTTTAAACTTATAAA              GGAGCT TTTT AGCTCC               TTTTTCTCTTGTTTT  81 377
HC659_RS10025 2025284 .. 2025294 -  -3.2  -3.80831   TTAAAATAAACAACA                 GGAT ATC ACCC                 AACCCATCTACTTCT  52 33
HC659_RS10020 2024543 .. 2024559 -  -3.7  -4.28487   CACCACAAAATTAAA              CGTTATT ATA ATTAACG              GCAAGTTTTCATTCT  61 345
HC659_RS10005 2022594 .. 2022615 -  -6.6   -5.4492   GACACATATAAAAAA           TGCTCCTA TAAGTT CAGGAGCA            CTACAAAAAACTGCT  93 51
HC659_RS10000 2021878 .. 2021903 - -10.6   -5.4148   TAAACAATGAAAAAA         GCTAATGTCT GCATGT AGACATTAGC          TTGGCTGGCGTTTAG 100 68
HC659_RS09990 2019657 .. 2019673 -  -2.2  -3.05011   ATATCCAAACCAAAT              CGATAC ATGGA GTCTCG              TACACCTTGGAAAGG  42 274
HC659_RS09970 NONE
HC659_RS09965 2015971 .. 2016000 -  -3.7   -4.1466   ATTGAACTGTGAAAA       TTTCGAAATTAAA GATT TTTAATAACGAAA        CGGGCTGCACTTGTT  58 322
HC659_RS09950 2015085 .. 2015104 -  -8.6  -5.63517   TCCGCAAATAAAAAA            GTGACCAC CAAT GTGATCAC             AAATATATCAAATAA 100 42
        oxdD 2013729 .. 2013751 -  -7.1  -4.98857   ATTCAAGCAGAAAAA           CCCTACATA ACGTA TATATAGGG           ATTTAATAAAACACA  85 94
HC659_RS09940 2012807 .. 2012822 -  -2.5  -4.32034   CCATGATCATGAAAA              GGAGT GGCTTA ACCCC               AAAAATACAAGCCCT  60 502
HC659_RS09925 2010100 .. 2010114 -  -7.1  -4.17109   AATAACGAAATGAAA               CAGGC TGTTG GCCTG               ATAACAGCTATACAG  73 47
        exlX 2009137 .. 2009156 -  -6.4  -5.17054   AGAACATTGAAAAAA            CAGCGG GAAAAGAT CCGCTG             TTTCGTATTTTTTAT  86 37
HC659_RS09910 2005621 .. 2005656 -    -7  -4.39889   ACAACCACAGTAAAA   GTAGCCAACCCCCACC GAATAA GATGGGGGTTG-C-AC    GTAAGTAGCCTGTTT  79 39
HC659_RS09895 NONE
HC659_RS09890 2003973 .. 2003988 -  -2.6  -5.59564   ATAAACGGAAAAAAA              TATGTC CAGA AACATA               TGTTAAAAGATTGGA  83 453
HC659_RS09875 NONE
HC659_RS09870 1998781 .. 1998794 -  -4.5  -4.10429   AATGATTCCTCAAAA               CAGCA GAAA TGCCG                CCTTAAATTAATACT  61 28
HC659_RS09865 1997432 .. 1997451 -  -5.7  -5.36364   TTAAAAAGATAAAAA            GCGACCCT CAAAC AGGG-CGC            TTTCTAATTAAGATG  86 33
HC659_RS09845 1994763 .. 1994778 -    -9  -6.11392   AAACAAATAAAAAAA              CCTGTC GAAA GACAGG               TTTTCATTTTTACGG 100 35
         rtp 1994074 .. 1994101 -  -2.7  -4.68539   ATGAAAAGCAGAAAA       CACCCGGTTGACA CTGC TG-CG-CCGGGTG        TTTGTTTCTATTAAA  62 36
        proC NONE
        proB 1991914 .. 1991948 -  -6.5  -6.13503   TATCAATAAAAAAAA    TGAACCCGA-GCTTCT ATAT AGAAGCTTCGGGTTTT     TTTCTGCAAATTAAT 100 36
        gltB NONE
        gltD 1984747 .. 1984774 -   -15  -5.83226   AATGGAATAAAAAAA        GAAACCGG-CTGG CAG CCAGACCGGTTTC        TCTTATATGATAATC 100 49
        yofA 1982613 .. 1982637 -  -7.9  -6.11392   AAATAAATAAAAAAA          CTGTACTCGCT TCA AATGAGTACAG          TTTTTTCATGCAGAT 100 154
HC659_RS09795 1980404 .. 1980424 - -11.3  -5.82281   AAATATACAAAAAAA            GACACAATT TCA AATTGTGTC            CTAATCCTCATCCTT 100 26
HC659_RS09790 NONE
HC659_RS09785 1979399 .. 1979425 - -12.4  -4.55295   GTTTGCATAAAGAAA         GACAACAGGC GAAAAGT GCCTGTTGTC         TTTTTGTGTATAACG 100 37
HC659_RS09775 1977089 .. 1977112 - -11.1  -5.99154   TATCAAATAAAAAAA          CACCGTTCA AACTTA TGAACGGTG           TGATTCGGAGGCTAT 100 37
HC659_RS09770 NONE
        dacB 1974471 .. 1974493 - -10.7  -5.77988   ACAGACATAAAAAAA           CCTGTTTTC TCTTG GAAAACAGG           TCTGCCGCTATTATT 100 36
        ppsA 1966452 .. 1966467 -  -3.3  -3.92659   TTTTCAAAAGTTAAA              GATCT TTCACG AGATC               TTCGATGCTAGATAA  55 5
        ppsB NONE
        ppsC NONE
        ppsD 1940227 .. 1940239 -  -3.4  -4.21462   ATTCATTAGTGAAAA                CTGA GCATA TCAG                CGATCTCTTGCAGGG  59 3
        ppsE 1936334 .. 1936360 -  -9.5  -5.01422   TGATACAAAAAGAAA        GACGGACAGAGA ATGG CCTCTGTCCG-C         TAATCCGCTTTATCG 100 35
HC659_RS09735 1935841 .. 1935873 -  -5.8  -5.48163   AAATAAACGAAAAAA     GTCCT-AAAGCATGTT GTG AAC-CGCTTTTAGGAC     TTTTTATCATTCATC  91 19
HC659_RS09730 1934169 .. 1934187 -  -9.6  -5.41143   CACTTTTTAAAAAAA             GACGACTT AGA AAGCCGTC             CTTCTCATTTCTTAT 100 37
HC659_RS09725 NONE
HC659_RS09720 NONE
HC659_RS09715 NONE
HC659_RS09710 NONE
HC659_RS09705 NONE
HC659_RS09700 NONE
HC659_RS09695 NONE
HC659_RS09690 NONE
HC659_RS09685 1925820 .. 1925840 -  -9.7  -4.27886   TTGTAAATATATAAA            GGAGCGC TTTTTTT GCGCTCC            TAAGTTCTTGCTTTT  86 39
        nrnB 1924113 .. 1924124 -    -3  -2.56601   TTGATTAAAAAGCAT                CATA TCGA TATG                 TCGGAAAACTGGTTT  40 386
        xynD NONE
        xynC 1918822 .. 1918845 - -11.8  -5.92399   CAACAAAATAAAAAA          GCGATTTCCC AATC GGAAAATCGC           CAATTCAGACACTCT 100 66
HC659_RS09635 1914048 .. 1914070 - -16.4  -5.70522   AACAATAATAAAAAA           CCCGCTCATA CTA TATGAGCGGG           TTTCGTTTGTTTTTT 100 193
        plsY 1908009 .. 1908024 -  -3.3  -3.26722   GTCATATTCATAACA              GAACA CCCCTT TGTTC               TTCATTTGAATTTTC  47 93
HC659_RS09610 1907692 .. 1907712 - -11.2  -5.42259   TCATTTGTAAAAAAA            GAACGCAC ATGAA GTGCGTTC            TTTTTTATTGGTATT 100 30
        sspO 1902458 .. 1902470 -  -4.1   -2.8272   TCATAAAATGAGAAC                CTCCT TAA AAGAG                TTCGGTGTTATTGAT  46 33
HC659_RS09565 1902278 .. 1902293 -  -4.7  -5.66684   GAACGCATAAAAAAA              CAGAC ACTAAG GTCTG               CTTTTCTTACATATC  88 32
        cotM 1901788 .. 1901817 -  -9.5  -5.47821   ATGGACGGAAAAAAA       GTCACTTTCAT AATAGGGG ATGAAAGTGAC        TTTTTATGTTTAGCT 100 35
HC659_RS09555 1901139 .. 1901160 -  -8.8  -5.33921   AAATGAATTAAAAAA           CCTTTCCT CTTGTC AGGAAAGG            TTTTTTATTTGAGAA 100 30
        ynzD 1898979 .. 1899004 -  -9.2  -4.39828   AACATGGTTATAAAA         TAAAAAACCC TTATAC GGGTTTTTTA          TTTTGCAATCATTCA  91 34
        lexA 1893756 .. 1893781 - -12.6  -4.44667   TTTTTGAACAACAAA         CCCCCTCTCC GTAAAG GAAGAGGGGG          TTATTTTATGCATCT 100 55
HC659_RS09490 1892156 .. 1892180 -  -9.3  -4.67755   ATAGCTACTGAAAAA          TAGGAGGCGAT AAG ACAGCCTCCTA          TTCCTTATGCTTCTC  91 23
HC659_RS09440 1882417 .. 1882446 - -11.7  -5.40474   ACCCTTGGAAAAAAA       CAAAAAAGAGAGA TACC TCTCTCTTTTTTA        TTCTTCGACAGCCTT 100 23
       tatAC 1881509 .. 1881529 -    -9  -4.84353   ACAAATCAAAATAAA            GAGCCGAT TTTTC ATCGGCCC            AAACGATTTATCCTA 100 38
        cotC 1881119 .. 1881134 - -11.8  -4.49311   CACAAACAAAAAAGA              CCCGGC AATA GCCGGG               GGAAAGTAAAAACGA  95 58
HC659_RS09415 1880557 .. 1880572 -  -3.3  -3.86202   CTTTATCAGAGGAAA              GAATG AGATCA CATTC               GTTTTAACCGATTTG  55 18
HC659_RS09410 1879648 .. 1879665 -  -8.4  -3.24146   TGCTCCAAGGAAAAC             CGCCAG ACAATG CTGGCG              CCTTTTTGCTGCTTC  69 43
HC659_RS09405 1879339 .. 1879358 -    -8  -5.48787   ATAATACATAAAAAA            GATTAACT CTAC AGTTAATC             TTTTTTATTCAGAAG 100 20
        cotU 1877070 .. 1877089 -  -3.6  -4.00042   TTGTCGATGAAACAA            GCATCTCT ATAA AGAAATAC             TTTTATCTAAATTTT  56 226
         alr 1874068 .. 1874096 - -17.7  -4.84359   TTAGTTTCAGAAAAA        TCAAAATCCCTCT GGT AGAGGGATTTTGA        TTCAGCATTTTAAGA 100 45
        yncB 1871369 .. 1871392 -   -11  -4.18674   TTTACACACAAATAA          CCCCCTCACA TTGA CGTGAAGGGG           TGTTTTTTATTGTTA  90 184
HC659_RS09345 1866640 .. 1866659 - -10.8  -5.55769   CCCTAGAATAAAAAA            GCTCATCT TTAA AGATGAGC             TGTACATTCCATAAA 100 43
        cwlC 1848919 .. 1848945 -  -7.9   -5.7946   TCTTGAATAAAAAAA         CCCGGTTTCTC GCGAT GAGGAGCCGGG         TTTTTTTATGAGACG 100 57
HC659_RS09195 1841642 .. 1841660 - -13.2  -5.07275   TCACACACATAAAAA             GACCCCTT TTT AAGGGGTC             TTTTGCGTTTAATAA 100 34
        ebrA NONE
        ebrB 1840843 .. 1840867 - -11.5  -5.14682   GGAGAATAAAGAAAA          CAGACGGTC ACTCACA GACCGTCTG          TTTTTTATCTTCAGC 100 8
        aprX 1837497 .. 1837526 - -10.1  -4.80455   TATTCAAACACAAAA       CCGGCAGTTCTGCT GAG AG-AGAATTGCCGG       CTTTTTGGTGCTTTT 100 40
HC659_RS09160 NONE
HC659_RS09155 1836110 .. 1836143 - -18.3  -4.03413   ACGGCTCGATATAAA     GCAGCGCCTTTGAAC GAAA GCTCAAAGGCGCTAC      GCTGTATTATTTTGA 100 53
HC659_RS09150 1834690 .. 1834713 - -14.6  -4.51238   CTGAGAAAACACAAA          CGCCCCCTCT TTTA AAAGGGGGCG           TTTTGAATGTTATTT 100 35
HC659_RS09065 1757351 .. 1757373 - -13.5  -5.52347   AACAAAACCAAAAAA           GGCCTTTCC ACTAG GGAAAGGCC           TTTTTCATCATGTTA 100 38
HC659_RS09060 1756419 .. 1756443 - -14.5  -2.70932   CGGGGGTGGTAAGCA          TTGATCCATTC TCT GAATGGATCAA          TGCTTTTTTTGTACT  95 385
HC659_RS08515 1647321 .. 1647340 - -13.6  -5.15167   GACGATTAAGAAAAA            GGCCCCAA CATC TTGGGGCC             TTTTTCTTTTTTATC 100 36
HC659_RS08445 1631750 .. 1631774 - -13.5  -5.00895   TTCACCACATAAAAA          CGCCTGCCACA TAT CGGGGCAGGCG          TTCATTTTGTTATAC 100 35
HC659_RS08355 1612274 .. 1612303 - -13.7   -4.7458   ATGAGAAGAAAGAAA       TAAGCCAGAGCAT ACAA ATGCTCTGGCTTT        TCTTTATGCGGCTCA 100 38
HC659_RS08085 1552496 .. 1552514 -  -3.1   -4.4009   TCGTATGTGAGAAAA             CAATACC AGTCA GGTATAG             AGCTTGCAAAAAAGC  62 468
HC659_RS08065 NONE
HC659_RS08060 1549973 .. 1549991 - -13.2  -4.35926   AGCTGAAAGCGAAAA             GCACCTGA TTC TCAGGTGC             TTTTTCTATACATTT 100 31
       spoVV 1546748 .. 1546769 -  -5.9  -3.61591   CAAAAATTCAGACAA           GGATGAG GGTTTTGA CTCATCC            TTTTTTTGTTCCGTT  61 20
HC659_RS08000 1541510 .. 1541532 -  -9.2  -4.52047   GACGATATCATAAAA           GGTACAGC GAAATAT GCTGTACC           TTTTCGTTACATTTG  91 32
        ctaA 1534192 .. 1534217 - -13.4  -5.27399   CAAGACATGAAAAAA         GACCAAAGCC GCCTAA GGCTTTGGTC          TTGAGTCCTTATGAT 100 34
HC659_RS07940 1526941 .. 1526961 -  -2.5  -4.11484   GTGAAGCTGTTAAAA            GGTGAGA GATCAGG TCTCGCC            CAGCTTGCAGCTGAT  55 53
HC659_RS07930 1524852 .. 1524872 -  -5.4   -5.4593   CCAAAATAAGAAAAA            GCTAAAGC GCAAG GCTATAGC            TTAGTCATTGTTGTT  88 26
HC659_RS07925 1524521 .. 1524555 - -17.4  -3.06073   GACAGTCTGCAAAAT     CATAAAAGACTCAGCT GAA AGCTGAGTCTTTTTTG     TGTTCTGTATGGTTA 100 51
HC659_RS07910 1521957 .. 1521975 -  -7.4  -5.09521   TTAAGAAATGAAAAA             CACCGC TTTCTTT GCGGTG             TTTTTTGATTACAAT  90 62
HC659_RS07905 1521095 .. 1521119 - -12.2  -5.71712   GCTGATATAAAAAAA         GCGCTTGTCCG ATTC CGG-CAAGCGC          TTTTTTACATTAAGC 100 35
        nprE 1516201 .. 1516218 - -11.3  -4.91084   TATGTAACAATAAAA             GCCTGAG GGAT CTCAGGC              TTTTCCTAATATTAC 100 37
HC659_RS07875 1514926 .. 1514946 - -14.1  -5.06414   CGGGTTCAATAAAAA            GCCTCTCAA ACA TTGAGAGGC            TTCTGATGATTTGAA 100 43
HC659_RS07855 1512403 .. 1512424 -   -13  -5.12971   AAGATGTAAGAAAAA           GAGCCGGG GGATAT CCCGGCTC            TTTTTTATGCTTGTG 100 30
        speA 1510440 .. 1510462 - -17.8  -5.94597   GAAGAGTAAAAAAAA           GCATGCGGCT TAA AGCCGCATGC           TTTTTATTTTTTATT 100 36
HC659_RS07835 1509492 .. 1509515 - -13.2   -4.8048   TTTTCATATCAAAAA          CAGCCC-CGCT TTG AGCGAGGGCTG          TTTTTTTATTTTGAC 100 31
HC659_RS07805 1503013 .. 1503036 - -12.5  -3.61468   GTGCAACGAAACGAA          TGACCAGCC GTATAT GGCTGGTCA           ATTTCATGCTGTGTG  95 42
HC659_RS07800 1502359 .. 1502379 - -16.9   -4.8743   TTTAAAATAAAGAAA            CGGCTGGCA TTG TGCCAGCCG            CTTTTTCTATTAGCG 100 35
       rnpZA NONE
HC659_RS07785 1499282 .. 1499306 - -20.1  -5.08601   TCACTGCAATAAAAA          GAGGCACTCCC TTA GGGAGTGCCTC          TTTTTTTAAACCTCC 100 31
       mreBH 1492733 .. 1492745 -  -3.4  -4.67552   GTGAGGAAAAAAGAA                GCAA GAAAT TTGC                CGCGTGTGAGAATTT  64 53
HC659_RS07750 1492506 .. 1492526 - -11.9  -4.81249   GCCCAAAGTGAAAAA            CCCAAAACG ACA CGTCTTGGG            TTTTTTCAATATTAT 100 37
HC659_RS07745 1491160 .. 1491194 -  -9.6  -4.99861   TATGAAGCAGAAAAA    TAAA-AAAAGGAGGC GGAAAA GCCTCCTTTTATTTA     CTTAAAAAGCCCAAT 100 27
HC659_RS07730 1488080 .. 1488128 -   -20  -3.59627   ACGAAATGCGTCAAA CAAAATAAAAACGCCTTGCTGGC CTAG GACAGCA-GGCGTTTTTATTTTG AAAAAGAAGCGACCA 100 18
HC659_RS07645 1470577 .. 1470598 -  -9.5  -5.48623   AAATATAAAGAAAAA           CTGCTTG-GC ATC GCTCAAGCAG           TTTTTTTATTGAGGT 100 31
        mscT 1467394 .. 1467412 - -10.3   -5.1244   TCAGTAATATAAAAA             CCGAAGC AAAAA GCTTCGG             TTCTTTTATTTATTC 100 35
HC659_RS07555 NONE
HC659_RS07550 NONE
HC659_RS07545 1454657 .. 1454684 - -12.2  -4.75174   TATTGAATGTAAAAA        TGCGCTTTTTTC TAAG AAAAAAAGCGCA         TTTTTAACCTGCATT 100 39
HC659_RS07540 1454062 .. 1454109 - -13.8  -3.06915   ACGTATGTTATTGAA TAAATAAAAACAGCCGTTGCC AGAAAGA GGC-ACGGCTGTTTTTATTTT AAAAGTAACTCTCGC 100 24
HC659_RS07530 1452719 .. 1452746 -  -3.5  -5.60993   CTTTTCAGAAAAAAA        GAAGACAACCA GCGATT TGATTGTCTTT         ATTGTATCATGTTCT  84 67
HC659_RS07525 1451398 .. 1451417 -  -9.3  -5.55855   TCCAAAAAAATAAAA            CAACGGC TTAAAC GCCGTTG             TTTATCGTCTGCATT 100 13
HC659_RS07510 1446153 .. 1446177 -   -13  -5.95539   GGTGAAATAAAAAAA          GATTGCCTGT ACGAA ACAGGCAATC          TTTTTTTTATTATTT 100 35
HC659_RS07495 1442348 .. 1442371 -   -11  -3.66646   AATATTTCACTTAAA          CGGGCTGTTG TGAT CAACAGCTCG           CTTTTTTATAAAAAG  88 15
HC659_RS07450 1432830 .. 1432854 - -13.6  -5.08255   ACTCCTAAAATAAAA          CCAGCAGCCC TAATC AGGCTGCTGG          CTTTTTATGTATCAA 100 37
HC659_RS07420 1427108 .. 1427123 - -10.4  -5.08824   TTTTTATGTAAAAAA              GCTGCC GGCC GGCAGC               TTTTGAGAAAGCGAA 100 108
HC659_RS07390 1421336 .. 1421350 -  -8.6  -3.60475   AATTTTCAGCGGAAA               TGTGAC CTG GTCACA               GCGAAGTGTGACCCG  75 509
HC659_RS07360 1415062 .. 1415084 - -14.2  -5.75599   GAAAGCATAAAAAAA           GCGGCTTCCT AAA AGGAAACCGC           TGATTGTTATTTCGC 100 32
        motA NONE
        motB 1413104 .. 1413130 -    -8  -5.71638   TAATAAGTAAAAAAA         GGAAGCCTGATA TGT CACAAGGCTTCC         TTTTTTGCTATTTTT 100 33
        kinD 1410925 .. 1410947 - -13.4  -5.49569   CACGAAGATAAAAAA           CCCTCCTGAC ATG GTCAGGGGGG           CTATGATGCGGATAC 100 26
HC659_RS07325 1409593 .. 1409613 - -16.9   -2.9913   AATAAGCATGAGATA            GCCCCGTTC ATC GAACGGGGC            TTTTTATATTTATTG 100 35
HC659_RS07295 1403945 .. 1403969 - -18.7  -5.00616   TGTGGCCGTAAAAAA          GCCTCCTTCTC AGA GAGAAGGAGGC          TTAACATCTATGTCC 100 285
HC659_RS07290 NONE
        mtnA 1401594 .. 1401629 -  -6.1  -6.11392   AAAGAAACAAAAAAA    CCG-CTGACTCGGCTC CAAAT GAGCAAAGTCCGGCGG    TTTTTTAATGCACCT 100 30
HC659_RS07265 1397351 .. 1397407 -  -8.4  -6.01725   AACAAAAATAAAAAA CACCAATAAAAAAG-ACCTCTTAGGCGG CGT CCGCTTAAGAGGTGCTTTTCTATTT-TA AATAAGCATTTTTGC 100 18
        htpK 1393554 .. 1393573 - -12.8  -5.35224   TGGAGAAAAATAAAA            CCCCGGCC TCTG AGCCGGGG             TGGCGCAGACTATAG 100 35
HC659_RS07235 1393223 .. 1393244 - -12.3  -3.49107   AGCTAAAAATGAAGA           TTCGCCGAG TGCC CCCGGCGAA            TAAAGACCTGAATTT  90 39
HC659_RS07210 1386777 .. 1386799 -  -7.6  -5.02074   TTATGGGTGAAAAAA           GCCGGCGC TGTTATT GCGACGGC           TGTTCAATAATGAAT  89 13
HC659_RS07205 NONE
HC659_RS07200 1383961 .. 1383983 - -12.1  -3.81539   AGTTAAACACGGAAA           GAGCTGACT TCATT AGTCAGCTC           TTTTTCTTCAACTGA  93 19
HC659_RS07185 1380193 .. 1380208 -  -3.2  -5.86965   ACCTATCAAAAAAAA              GACTGA TGCC TCGGTC               AGCACAGTCTTTTTT  88 43
HC659_RS07175 1377935 .. 1377957 -    -2  -4.83169   ATTTTTTTATAAAAA           TCCTATATAC GAG GTAGATATGA           TGAGATTATCGTTTA  66 487
        tnrA 1376836 .. 1376859 -  -8.8  -4.84529   TTATAAACGTAAAAA          GTCCGTCTCA ACTG CGAGCCGGAC           TTTTATTATTTAACG 100 35
        thiU NONE
HC659_RS07115 NONE
HC659_RS07110 NONE
        thiX 1367504 .. 1367524 - -14.1  -5.84381   TCATCAATAAAAAAA            TCCGCTATC TGT GATAGCGGA            TTTTTTATGATGCGA 100 30
         isp 1365141 .. 1365179 - -14.9  -3.28924   GAGGTTTTCTCACAA  CA-AAAAGCCTCTTTCCC ATGA GAGAAAGAGGCTTTTCTG   CGTAAAACACTGCCT 100 329
        metE 1362748 .. 1362768 - -11.2  -5.74122   TATTATAGAAAAAAA            CCATCTGC CAAAT GCAGATGG            TTTTTTCAAATTATA 100 36
        guaD 1362109 .. 1362133 -  -9.3  -4.15703   TTGGAGAAATAACAA          GGACCAGGC CGCGCAT GCCTGATCC          TTTTAATATTCTTTC  85 28
        ohrR 1360870 .. 1360894 - -14.4  -5.47159   CTGAATAAATAAAAA          GAGGATGCCT GTACA AGGCATCCTC          AATTTTTTTGATGAA 100 24
HC659_RS07020 1353465 .. 1353486 -  -9.5  -3.92869   AACACATACATGAAA           CTCTTCTCC TTTC AGAGAAGAG            TTTTTTATTGAGATA  83 66
HC659_RS07005 1350444 .. 1350454 -    -4  -2.50387   CTTGATAAAATAAGC                 TGTT CAA AACA                 TGAAAAAGGGGAAGA  45 45
         pgl 1349300 .. 1349327 -  -9.2   -5.4659   TAAGATAAATAAAAA        GAGTGGCTCC TTTTTACT AGAGCCACTC         CATTTGTTTATACTT 100 33
        htrA 1337350 .. 1337377 - -19.2  -5.10461   TTTATCTAATAAAAA        GCCTCAGACCGC TTTT GCGGCCTGAGGC         ATTATGTTTTACGAA 100 34
HC659_RS06940 1336876 .. 1336900 - -17.2  -3.69354   TGTCATAACCTCAAA          CCCCCTGTCC GTAAT GGACAGGGGG          TTTTTATGCTCTGAG 100 177
        steT 1330834 .. 1330856 - -13.5  -5.14563   TGTTTCACCAAAAAA           CGGTTCCCT AAACA AGGGAACCG           TTTTATCAGCTTGCT 100 31
HC659_RS06915 NONE
HC659_RS06910 1328927 .. 1328947 -    -9  -5.52384   GTTCCATCAAAAAAA            CCGCTCCT TTGAC AGAAGCGG            TGTGACATTAAAATA 100 33
     spoIISA NONE
HC659_RS06900 1327893 .. 1327917 -  -7.9   -4.0219   TAAGAAAAGGAATAA          GGACAAGAG CTGTTTT CCCTTGTCC          TTTTAGTGTGATCAT  76 37
HC659_RS06895 1327686 .. 1327704 - -14.6  -5.00846   CAAAGACCATAAAAA             TCCCGGAG CCG CTCCGGGA             TTTATTTTTTCTTCT 100 27
HC659_RS06710 1300703 .. 1300715 -  -2.6   -5.0065   TAGCGAGAAAGAAAA                GCCC GTATA GGAC                TGGAAAGTAGTGTAG  68 126
HC659_RS06705 1299779 .. 1299796 -  -4.1  -3.86252   CTGGAGGAAAGAGAA             CGGGA TATTGTCG TCCCG              ACGACGTTTCCGCGT  57 286
HC659_RS06690 1297986 .. 1298021 - -17.8  -3.67068   AGGAAAAGCTGTAAA    TGAAAAGACGGAAGCT GTGA AGCTTCCGTCTTTTCG     CCTTACATACAAACT 100 28
HC659_RS06680 1296636 .. 1296649 -  -8.1  -5.64274   TGATGCATAAAAAAA               GACCC TTAG GGGTC                TTTTTTATTTCTTCA 100 30
HC659_RS06660 1293298 .. 1293317 -  -6.5   -5.4477   AAAGGCGCAAAAAAA            GATACCT CTTAAC AGGTATC             TTTTTTCTTGTTTAC  93 42
HC659_RS06655 1292316 .. 1292338 -  -9.2  -4.95547   GCTATAATAAGAAAA           GGCTATCC TTCAAGC GGATAGCC           TTCTTCATTAAATCA 100 33
HC659_RS06585 1276081 .. 1276106 -  -8.3  -4.59342   GGTAGCACAAATAAA         GGAGAACAGGC TTTC ACCCATTCTCC          TGCAGATGCTACGCA  88 34
HC659_RS06580 1275234 .. 1275247 -  -5.3  -4.24623   TTAAAGAGAGAGAAA               GGTAA TCCA TTACC                GGGTCCCACCCTTCA  67 21
        fetB 1274458 .. 1274481 - -11.8  -5.03945   TAACAAGTACAAAAA          GCCGCTTTTCC CTC GGAAA-GCGGC          TTTTGTCTGTCATTC 100 35
HC659_RS06565 1273239 .. 1273259 - -12.7  -5.36364   GTAAAAACATAAAAA            CCGAAATCA ATT TGATTTCGG            TTTTCTGTTTAAATA 100 34
HC659_RS06550 1270143 .. 1270164 - -13.1  -4.66609   TATTTGACTTAAAAA           GAAAGAGCC TGTG GGCTCTTTC            TTTTTTATAATGTAA 100 30
HC659_RS06525 1264339 .. 1264354 - -10.4  -5.14563   TTGTCCACTAAAAAA              GCGGCT GAAT AGCCGC               GTAGGGTGTTTATTT 100 35
HC659_RS06520 1263862 .. 1263880 -  -3.7  -5.21709   TTCTACATGAAAAAA             GCGTCAC ATACA GCGGCGC             TTTTTGATTCCCAAA  74 10
HC659_RS06510 1262620 .. 1262650 -  -5.3  -4.44667   TTTGTGAACAATAAA       GGCGGCCGGGA GGATGGAGT TCTTGGCCGCC       TCTGGTATGAGGTTA  70 38
HC659_RS06505 1262030 .. 1262059 - -13.7  -3.20126   AAGCGAAATAAATTA       GAAAAGGCTGTCC GTAC GGACAGCCTTTTT        TCTATTTAATAAGAG 100 31
        cotT 1260086 .. 1260106 -  -4.7  -6.09196   TTTAAAACAAAAAAA           TGGGGAGC TGGACT GC-CCCCA            TTTTGATATGTGGCG  95 42
        cyoE 1258981 .. 1259002 -  -4.4  -5.63517   TTTCCAAACAAAAAA           GAGTCACA TTAATG TGTGGCTC            TTTTTGCATCATCTG  86 34
HC659_RS06485 NONE
HC659_RS06480 1257687 .. 1257707 -  -4.7  -4.87291   TAGGGGAACGAAAAA            GCTTAGTCA TAT CGATTAAGC            TTTTTCCGCATCCCT  74 20
HC659_RS06470 1256392 .. 1256419 -    -2  -2.98105   ATAACATATAACAAT        TTTCTCTGATAC CTTG GCAGTAGAGAAA         GATGAAAAAATTGAG  42 165
HC659_RS06465 1255795 .. 1255821 - -15.3  -3.89435   GGTAAATAATCCAAA         CAAAAGCAGGC GCAGT GCCTGCTTTTG         TAATTAAGGACTCTA 100 38
HC659_RS06440 1249150 .. 1249182 -   -10  -4.28432   AACTTGAAGCGAAAA     TAAGGTCCCTTCTCT TTTT AGAGG-GGGACCTTA      TTTTATTCATGCATG  86 72
HC659_RS06425 1246903 .. 1246919 -  -8.7  -3.65714   AAATCATAGCTTAAA              CCCTTGC GTA ACAAGGG              TTTTTTATTTAGTTA  78 253
HC659_RS06420 1246421 .. 1246433 -  -4.1   -3.9467   AATTAGACATAATAA                GTCAA ATA TCGAC                AGAAGATTGTTACCA  56 35
HC659_RS06415 1245758 .. 1245788 - -15.7  -5.42265   CGAAATTATAAAAAA       TTAAACCCCTTCT GTTGT AGAAGGGGTTTAA       AATTCATTTATCAAT 100 36
HC659_RS06400 1243904 .. 1243924 -  -9.7  -5.09762   ATCTTAATAGAAAAA            CCCTTCTCT ATA AGAGCAGGG            TTTTATTTTTTATAC 100 45
HC659_RS06395 1243625 .. 1243645 -    -9  -5.27335   CTTCTTAAATAAAAA           GCCCTTCCC GATT GGGA-GGGC            TTTTTCTCTTATTTA 100 34
HC659_RS06385 NONE
HC659_RS06380 1240696 .. 1240712 - -12.3  -3.65313   GAATCATAGCTTAAA              CCCTTGC GTA GCAAGGG              TTTTTTACTTTGCCT  93 511
HC659_RS06365 1239245 .. 1239262 -  -2.7  -3.51234   AGGGAAATGCAAATA             TCCTTTT TATA AGAAGGA              AGAAAACCAATTTCC  48 14
HC659_RS06360 1238608 .. 1238630 - -14.9  -5.00616   CGGTTCGTTAAAAAA           GAAGCCGGG GATGG CCCGGCTTC           TTTTATTATTGTTCG 100 31
HC659_RS06345 NONE
HC659_RS06340 NONE
HC659_RS06335 1234234 .. 1234255 - -13.1  -4.76041   TATATGCAGTAAAAA           TCCGGATCT CAAA AGATCCGGA            TGCGTTCAGTCCTTC 100 31
HC659_RS06325 1231515 .. 1231534 -   -15   -4.8048   TTTTTACAGTAAAAA            CCCGGCAG TAAT CTGCCGGG             CTGTTAATGATGCAA 100 29
HC659_RS06300 NONE
HC659_RS06295 NONE
HC659_RS06290 1228459 .. 1228479 -  -8.3   -5.4593   GGAAAATAAGAAAAA            GCAGAGC GTTTTTA GCTCTGC            TTTTAGGTTCTAGAG 100 35
        cotY NONE
        cotZ 1227234 .. 1227261 - -13.6  -2.98823   GCTTTTTTACATAGA        GAAAAGCCTGCA GGCC TGCAAGCTTTTC         CAGCTTATGATTAAT 100 36
        prpE 1217186 .. 1217218 - -15.1  -2.81936   ACATGAGAAAACTGA      TAAAAGGAGAGAATC ATT GATTCTCTCCTTTTT      TATATGGGGCGAAAT 100 25
HC659_RS06200 NONE
        cwlQ 1212971 .. 1212993 -  -6.3  -5.41143   CACTTCGCAAAAAAA           CCAGAGG GAAAGAGCA CCTCTGG           TTACGCGTAATAAAC  89 26
HC659_RS06190 NONE
        spxH 1211418 .. 1211447 -  -7.1    -5.626   TATGGCATAAAAAAA       CAGCCTCAAGCAT ATGC ACGCCTGCGGCTA        TTTTTCACATGATTG 100 23
HC659_RS06180 1210935 .. 1210959 - -12.9  -3.93166   GTCTTAAAAAAGTAA          GCCTGTGCG GAAATGA CGCACAGGC          TTTTTTAAAACCCTT  95 30
HC659_RS06165 1207130 .. 1207151 -  -2.9   -4.3898   ATCATCGTCACAAAA           GCCCAGCTT TCCA AAGACGGAC            AAAAGCTCGAACTGC  60 424
HC659_RS06150 1205942 .. 1205963 - -13.1  -4.30844   ATCGTATCATCAAAA           GAAGGCTGA GTCA TCAGCCTTC            TTTTATTTTTCAACC 100 28
        trpS 1195913 .. 1195932 - -12.2  -5.53288   GTCAACTGAAAAAAA            CCGCTCTT TGCA AAGAGCGG             TTTTTTGATCAGCGT 100 34
        yjzB 1185621 .. 1185640 - -10.8  -4.14147   ACAGAATAAGAAGAA            GCCACTTT TTTG AAAGTGGC             TTTTCACATGATTTT  89 29
HC659_RS06030 1182524 .. 1182546 - -10.7   -5.1861   GTGACCACTAAAAAA           CCCAAAACA ATAAA TGTTTTGGG           TTTTTGGCTTTTTAA 100 37
HC659_RS05960 NONE
HC659_RS05955 NONE
HC659_RS05950 1167835 .. 1167861 - -15.2   -4.0098   TTTGAAGTCAAATAA         GAGGCTATGGCG AGT CGCCATAGCCTT         TTTTTATTGGAGTTT 100 29
HC659_RS05935 1165494 .. 1165517 -  -6.1  -5.34309   ATGAGCAAACAAAAA          CAGTCAGGAC ACAGA GTC-TGACTG          TTTTTGTTTGCTCAT  89 37
HC659_RS05910 NONE
HC659_RS05905 NONE
HC659_RS05900 1160233 .. 1160265 - -15.6  -4.37971   AAAATAGCATGAAAA     CGGCTCGC-CTGCAG CAGA CTGCGGAGCGAGCCG      TTTTTTTATGTCTAG 100 37
HC659_RS05890 1158475 .. 1158493 -  -8.2  -6.04953   AGAGAAATAAAAAAA             GTCCTCTT AAG AAGAAGAC             TTTGTCAGTGATTTT 100 270
HC659_RS05885 1156551 .. 1156575 -  -9.3  -4.57341   AATCCCGTTGAAAAA          GACCGCCCGAT TGG ATCAGACAGTC          TTTTAAGGGATTAAT  91 36
HC659_RS05880 NONE
HC659_RS05875 1155157 .. 1155179 -  -9.9  -5.24989   TCAGACAGCAAAAAA           CCGAACAGA AGATA CCTGTTCGG           GAAAAAAGAGGGTTA 100 38
HC659_RS05870 NONE
HC659_RS05865 1152679 .. 1152703 - -10.7   -4.8743   CTCAAAATAAAGAAA          TGGCCCAGCTT AAT AGGCTGAGCCA          TCCCACTTGTAGCGA 100 10
HC659_RS05860 1151511 .. 1151539 -  -3.1  -4.59342   CCGATGACAAATAAA        GAGAAAGCGGC TTACATT GCCGATTTTTC        TGATGAATTTCTTGT  66 449
HC659_RS05845 NONE
         sat NONE
        cysC 1147682 .. 1147697 -  -6.8  -5.56673   ACTCATAAGAAAAAA              CCCGAC ATTG ATCGGG               TTTTTTATATAATTC  93 30
HC659_RS05825 1145978 .. 1146001 -   -11  -3.75461   GAAACTGGCATTAAA          GCGGCA-GCTG AAA CAGCACGCCGC          CTGATGATGTCCTAA  88 48
HC659_RS05815 1143844 .. 1143854 -  -3.2  -4.19238   CCTTCAATTGCAAAA                 GAGT GAC ACCC                 CAAAATATCCTGCCG  59 3
HC659_RS05810 1143261 .. 1143283 -    -7  -5.75342   TTTCCGCAAAAAAAA           GCAAGGAC ATTTTTA GCCCTTGC           TTTCTCTTTTCTCAT 100 15
HC659_RS05790 1138574 .. 1138598 - -10.7   -5.1287   CTGATATCTAAAAAA          CACCCGGCC TTGATTG AGCCGGGTG          TTACGCCATACCTTT 100 26
HC659_RS05780 1136957 .. 1136993 -  -6.1  -4.11346   AGATTTAAATAAGAA   GGATAGAT-GAGCA GGGAAATATA TGCTCTATCTATCC    TTTTTTGTACAACGC  67 66
HC659_RS05770 1134311 .. 1134329 - -11.7  -4.97312   AAAAGTAACCAAAAA             GCGGTGC TCGAT GCACCGC             TTTTTTATTTGCGCC 100 30
HC659_RS05750 1128957 .. 1128973 -  -2.9  -5.16237   AATTTGACTAAAAAA              GCGACAA TTT TTGCTGC              GGCCTTTTTAATGGA  70 48
        yisI 1128471 .. 1128502 -    -8  -2.70354   TTGGGTATAAATTGA      GCGGAAATGCGGC GAAGGAT GCCGC-TATCCGC      CTATGGTGATTTTTG  63 204
HC659_RS05740 NONE
       gerPB 1127793 .. 1127806 -  -3.7  -3.24747   CTTTCATATGATTAA               CGGCC AGGA GGCTG                GAGCGGGACCAATGA  48 8
HC659_RS05730 NONE
       gerPD NONE
HC659_RS05720 1126547 .. 1126561 -  -2.1  -3.86194   AATTGCTGGCATAAA               CGACA CCCTT TATCG               AAGTCTCTGTTTATT  51 39
HC659_RS05715 1126296 .. 1126322 -  -8.8  -4.88129   AAAAATGACTAAAAA        GCAGCC-CTCT CTTTGC AGAGCGGCTGC         TTTTATCCGTTTCCA 100 28
HC659_RS05685 1113512 .. 1113526 -  -5.7  -2.93382   GGGGATATGTACATA               TACCC TGAAC GGGTA               TATCTAACGTTCCAT  52 29
HC659_RS05680 1113060 .. 1113081 - -10.2  -5.27335   CTGTCCAAATAAAAA           GAGGGTTC TTTTTT GAACCCTC            TTTTTTACGCTGCCA 100 30
HC659_RS05670 NONE
HC659_RS05665 1108574 .. 1108606 - -12.3  -3.49951   TATATCTTTATATAA      GAAAAAGAGGTTA TTCATTT TAACCTCTTTTTC      AATCGTAAGTCGTCA  90 168
        ntdA NONE
        ntdB NONE
        ntdC 1104183 .. 1104202 -  -7.9   -4.8048   CCCCTATATGAAAAA            GCAGGAA AATAAA TTCCTGC             TTTTTTAGTAACTTC  88 54
        glcP 1102802 .. 1102819 - -11.3  -5.63517   TTTTTAAATAAAAAA             CACGCAC TGCG GTGCGTG              TTTTTCGCTTTTTTC 100 160
HC659_RS05615 NONE
HC659_RS05610 NONE
HC659_RS05605 1096954 .. 1096991 - -15.3  -3.66178   CCTGTGAACGGTAAA   TAAGAAAAAGCAATCTGG TGT CCAGATTGCTTTTT-TTA   TGCTTATGCAGCCTG 100 29
HC659_RS05595 1095528 .. 1095560 -   -12  -4.08042   GGTATTAGAAAAATA      GGAAGGAGCTGACC GAACA GGGCAGCTCCTTTC      ATAAAGCTATGCCGT  93 32
HC659_RS05585 1094395 .. 1094415 - -14.1  -5.21236   AACGGATAATAAAAA            GCCAATCCT TGA AGGATTGGC            TTATTCGCTCTGCTT 100 26
HC659_RS05575 1091869 .. 1091888 - -10.8  -4.69464   AAAATATTTGAAAAA            CCGTTCAT TAAA ATGAACGG             TTTAATCGAGATCTA  95 27
       hemAT 1090423 .. 1090442 -  -4.2  -5.51402   ATAGACGCAAAAAAA            CCGGCC GTATGGCA GACCGG             TTTTTGATGGTTATT  84 36
HC659_RS05565 NONE
HC659_RS05560 NONE
HC659_RS05555 NONE
        phoE 1086540 .. 1086567 - -11.4  -5.09762   TGCTAAGAAATAAAA        GAAAAGACAGGC AAAC GCCTGTCTTTTT         CTTATTTGATAAAGC 100 27
        aprE 1082222 .. 1082247 -  -9.1  -5.38054   GCTGACAAATAAAAA         GAAGCAGGT ATGGAGGA ACCTGCTTC          TTTTTACTATTATTG 100 35
HC659_RS05520 1080358 .. 1080390 -   -18  -4.63218   TTTGCCCCAATAAAA      TGAAAAAGCGAAGC GGTTA GCTTCGCTTTTTCA      TTTTCAATCCTTTGC 100 29
HC659_RS05495 1075917 .. 1075947 - -16.3  -4.63089   TATGTGAAAAAATAA       GAAAATCCCACGC GTAAG GCGCGGGATTTTC       GCTCATTACAAATCG 100 31
        gltT 1074361 .. 1074386 - -18.3  -5.32699   TTAAAGATTAAAAAA         GCCTGCGGGGC AAGA ACCCCGCAGGC          TTTTCATTAACCAGA 100 32
HC659_RS05475 1072489 .. 1072515 -  -8.1  -2.62244   TGTTTCAATAAAAGG        TCCAAGC-AGCA GCAA TGCCCGCTTGGA         AAAATGTGAATGGAA  65 78
HC659_RS05465 1070570 .. 1070595 - -13.5  -5.38054   CTTCATAAAGAAAAA         GAACTTGTTTC CTTG GAAACAAGTTC          TTTTTTTGTTACATT 100 34
        hmoB 1061043 .. 1061063 -   -14  -4.43307   CTCCCAATAAAATAA            GCTGCCGG ACATG CCGGCAGC            TATTCGACAGCGAAA 100 25
HC659_RS05425 NONE
HC659_RS05420 1059239 .. 1059253 -  -2.8     -2.55   GAATATTTCAACTCA               TGCTGT TTT AAAGCA               TCATCACAGCTGCGA  41 18
        sndC 1057952 .. 1057977 - -11.9  -4.12738   GGATATTAAAGGAAA         CAGCCGGAG AATAAACA CTCCGGCTG          TTTTTTTATAGCTGA  93 31
HC659_RS05395 1054338 .. 1054361 -  -8.2  -5.18371   GTTCACAAAATAAAA          TAACCTCATC TTAT GATGAGGCCA           GGCGTTTTGCGATAG 100 12
        serC NONE
        trpP 1052445 .. 1052466 - -12.3  -5.40072   CTCTGTTCAAAAAAA           CCTCTCCCG GAAG CGGAAGAGG            TTTTGTGTGACAATT 100 39
HC659_RS05375 1051685 .. 1051706 -  -6.5  -5.75342   TTCGGCCAAAAAAAA           TACGGTCCA ATTT TGGCCCGCA            TTTTTTTCTTTTGAA  93 48
HC659_RS05370 1050786 .. 1050822 -    -3   -5.0916   CTGGCAACACAAAAA   GCGCAAGGATTTGTAAC CTTT GATA-AGCTCCTTGCGC    TTTTTGCCGGACAGC  73 144
HC659_RS05360 1049773 .. 1049785 -  -6.9   -2.5763   ATAGAATAAAATGAT                GGGAG ATT CCCCC                TCTCTCTGAACTGTC  60 117
HC659_RS05355 1049539 .. 1049583 -   -16  -3.39895   GGCTGTACTAATCAA CATAAAAAAGCATAGCTGCT TAATC AGCAGCTATGCTTTCTTTCG TATTTACACTGTAAA 100 29
        prsA 1048164 .. 1048190 - -22.4    -5.626   CATCGCATAAAAAAA         GCTGTGCGGCTC AAT GAGCCGCACAGC         TTTTTTTATTATTTA 100 34
HC659_RS05305 1039988 .. 1040020 -  -5.5  -2.81195   AGAACTGAAAAAAGT      GCTATCCCTTGAGCG CAG CGCCCAAGAGAGAAT      GAGAAGGACCAAGGA  50 119
        khtS NONE
        khtT 1038247 .. 1038257 -  -5.4  -3.82946   CGACTTCAAATACAA                 GATG GTC CATC                 GGGGCTCACACGCCC  63 31
        khtU 1037012 .. 1037033 - -14.5   -4.3179   TGAAAAAACGACAAA           GCAGCACTG ATTA CAGTGCTGC            TTTTTTTATCCCTGT 100 31
HC659_RS05270 1032945 .. 1032966 - -11.7  -4.56133   GGCTAATAAGCAAAA           TCCCTTCTT GGAT AAGAAGGGA            TTTTTTATTCATTCA  95 38
HC659_RS05255 NONE
        yheD 1028620 .. 1028643 -  -5.3  -3.89695   TTTGGATAAAGATAA          GCCCACTTT ATTAAA AAAGCGGAC           AGGTTACGAAGGCCA  63 29
HC659_RS05245 1028259 .. 1028279 - -11.2  -6.02919   TGAGAAAGAAAAAAA            GCTTAGCC GTTTA GGCTAAGC            TAGTCATAAATATGA 100 25
HC659_RS05240 1027824 .. 1027846 -   -17  -4.77173   GGGTGACAAAATAAA           GAGAGCGCGG AAA CCGCGCCCTC           TATAGCCATATATTG 100 46
HC659_RS05235 1027632 .. 1027648 -  -2.3  -3.20028   TTCATTATAAAAGGA              TGTTC TCAGTTT GAACA              GCGCGGGAAAGAATA  43 14
HC659_RS05230 1026940 .. 1026961 - -11.7  -5.06103   ATAATGCTCAAAAAA           CCCAAAACA ATCG TGTTTTGGG            TTTTTGGTTTATGTA 100 42
HC659_RS05210 1022191 .. 1022211 - -11.9  -4.45115   ATGAATATAAAAGAA            GTGAGCACA GGG CGTGCTCAC            TTTACAATCAGGACG 100 22
        nhaC 1020692 .. 1020716 -  -7.9  -4.81082   AATGAACGAAGAAAA         GAG-CCCGCT TTTTAC AGCGGGGCTC          TTTTTATTTTTTAAC  88 29
HC659_RS05195 1018669 .. 1018691 -  -9.1  -4.72272   TTTGGGCATGAAAAA           GTGAGCCGC TTTAT GCGCCTCAC           TTTTTTATTCATGAA 100 30
HC659_RS05175 NONE
HC659_RS05170 NONE
        crcB 1014546 .. 1014562 -  -6.5  -3.42256   ATCGATTCAAGAAGA              CGTCGAT ACG ATCGGCG              GGCTGATATTAAAAG  59 251
        cueR 1011238 .. 1011264 -  -7.4  -3.51329   TATGTCCAATTAGAA         CCTTCACTCT AGCAATG AGAATGAAGG         TAACACCTCCTGTTA  67 53
HC659_RS05145 1009873 .. 1009890 -  -9.9    -5.093   GTGAAAATAAGAAAA             GCACCTT ATAC AAGGTGC              TTTTTATTATGCTTC 100 32
        sigM NONE
HC659_RS05125 NONE
HC659_RS05120 1006048 .. 1006065 - -11.3  -5.25803   AACCGGTATAAAAAA             GACGCCT GAAA AGGCGTC              TTTTTTAAAAGCCAA 100 30
HC659_RS05110 1004066 .. 1004087 - -11.5  -5.44721   ATCATTTTAAAAAAA           CAGGCTCCG TTTC CGGGGCCTG            TTTTTTATTTAATAA 100 34
        citR  997856 ..  997873 - -11.3  -4.53705   AATTTTTAGAGAAAA             CCCGTTC ATTG GAACGGG              TTTTTTTCATTAGAC  95 65
        phoA  994898 ..  994921 -  -9.6  -5.29782   GATATTTATAAAAAA          GAGGATGCAG CGTT CTGCATCCTT           TTTATTTTCCAGTTT 100 27
HC659_RS05065  991756 ..  991801 - -13.5  -6.11019   AAAAATGAAAAAAAA GGAATTAAAAAACATGCACCC AGCT GGGTGCATGTTTTTTGCTTAC ATGTCATTCGGCGGA 100 22
        nsrR  991237 ..  991260 -  -5.4  -5.63504   AAGGGCATAAAAAAA          GAAGGAAT CTTAATCT ATTCCTTC           ATTTTTAAAAGCTTC  88 16
        lytF  989598 ..  989622 -   -10   -5.4505   GGCTCTAATAAAAAA          CTGTACAGCC GTTAA GGCCGCACAG          TTTCTGTTTTTAGAA 100 35
HC659_RS05045  988797 ..  988818 - -15.9  -4.13748   CGCAAAAACAGGAAA           TCCCGGCGT CTAA ACGCCGGGA            TTTGTTTATGTGAGA 100 31
HC659_RS04975  973437 ..  973456 -   -10  -4.67353   CGAGTGACTTAAAAA            GCCG-AGGC AGT GCCTGCGGC            TTTTCTTCATGAAAA  91 32
HC659_RS04960  968411 ..  968447 -  -2.4  -5.51165   AAAATTTGAAAAAAA   CAGTGCGGCATTGGATAG TAT CTATCCAATGC--CTTTG   TTATTAGTGAAGTCC  81 29
HC659_RS04945  966234 ..  966259 -   -12  -4.43213   CGTAACATATGAAAA         CGTGTAATCC AAACAA GGATTACACG          TTTTTTTAACGGCCG 100 31
        dgcK  963338 ..  963353 -  -2.4  -5.68023   TCAGAAGCAAAAAAA              GCGGGC TTGA ACCCGA               AAAAGCATACGCTAA  86 252
HC659_RS04925  962068 ..  962087 - -12.2  -5.45802   TTGTCAAAATAAAAA            CTGCAGGT TTGC ACCTGCAG             TTTTTCATATCAATT 100 46
HC659_RS04825  945054 ..  945072 -  -8.9  -4.62069   TTTTTATGTGAAAAA             GAACACG GTATT CGTGTTC             TTTTACGTAAGCCAA  90 28
HC659_RS04815 NONE
HC659_RS04810  944032 ..  944057 -  -9.7   -5.4505   GCTGGTAAGAAAAAA         CTCCGGC-CGAT TAC AGCGCGCCGGAG         TTTTTTTCGTTTTTC 100 10
HC659_RS04775  937349 ..  937366 -  -9.1  -5.88197   CTAAATATAAAAAAA             CCCGCTG ACTA CAACGGG              TTTTTGCATTTCTCC 100 42
HC659_RS04765  935520 ..  935545 - -14.9  -6.13503   TATCAATAAAAAAAA         TGAAGATGGAG AATG CTCCATCTTCA          TTTTTTTTTAGAAAA 100 33
HC659_RS04750  932345 ..  932376 -   -16   -5.5112   TGGAGCAATAAAAAA      GAGACGGCATCTCA TCTT TGAGATCCCGTCTC       TTTTTGTGGTCTTTG 100 74
       spo0M  931196 ..  931209 -  -8.1   -4.9448   ATTTATTAAAGAAAA               GGAGC CGAG GCTCC                TTTTTATACTTACTC  95 35
HC659_RS04635  922774 ..  922802 -   -14  -4.86773   GAAAATCATTAAAAA        TAAGCTGACCGC ACGAA ACGGTCAGCTTA        TTTTATTTCGACATT 100 28
HC659_RS04620  920261 ..  920279 - -13.2  -5.94713   ATTCCATAAAAAAAA             CAGGAGCT CAA AGCTCCTG             TTCAAGGTATTTGAT 100 42
HC659_RS04615  918996 ..  919013 -  -9.1  -5.71712   TTGTATATAAAAAAA             CCCGGCT GTTT AACCGGG              TTACTCTTCTGTTTC 100 26
HC659_RS04585  914585 ..  914604 - -10.7  -3.42346   AAGATGGCAGGAGAA            GCAGCCG CCATCT CGGCTGC             TCCGTAAACCATTCT  80 40
HC659_RS04575  912295 ..  912318 - -14.6  -4.76312   TATAAGACGTAAAAA          GCCCGGCTCT ATAT AGAGCCGAGC           TTTAATTTTTTCTGA 100 10
HC659_RS04540  905931 ..  905951 - -11.2   -4.7339   AATAAAGGGTAAAAA            CAGCTGCA GTGTA TGCAGCTG            TTCTTCTTTACCGTT 100 33
HC659_RS04520 NONE
HC659_RS04515 NONE
HC659_RS04510  902024 ..  902050 - -16.7  -5.22039   CTGAAATGTAAAAAA         CCCCTTGTCTC AAACG GAGACAAGGGG         TTTTTCATTAACGAG 100 33
HC659_RS04485  897185 ..  897208 - -15.4  -5.46698   GGCAAAAGCAAAAAA          GACTCCGTCT AATA AGACGGAGTC           TTTTTTTATTTCGTT 100 31
HC659_RS04475  893934 ..  893963 -  -7.1  -5.95539   TGTCAAATAAAAAAA       GCCTG-CTCCCGCA GTT TGCGGATGACAGAC       TTACAGATTTATTCT 100 34
HC659_RS04470  891927 ..  891940 -  -3.8  -2.88663   AGCCAGCTTGACACA               CCGT ACCGGG ACGG                TGGATGGACCGTTCG  46 389
HC659_RS04460 NONE
HC659_RS04455  889783 ..  889804 -   -13  -4.41633   CAGGGTGAAAAACAA           GCGGCAGG GGGGCT CCTGCCGC            GTTTCTTTACTTCTC 100 32
        padR  886977 ..  886997 - -11.2   -5.0538   TCCGAGCCTAAAAAA            CATCTGCC GTTTA GGCAGATG            TTTTTTTGCATGTGG 100 73
HC659_RS04355 NONE
HC659_RS04350 NONE
HC659_RS04345 NONE
HC659_RS04340 NONE
HC659_RS04335 NONE
HC659_RS04330  863664 ..  863686 - -14.2  -5.34309   AGGATTAAACAAAAA           TGGCCCGCTT CAT AAGCAGGCCA           TTTTGTTATCCGCGC 100 31
        corA  849173 ..  849191 -  -6.7  -5.55769   GCTTACAACAAAAAA             GAACAGC TGCTC GCTGTCC             TCATTTAAAAATATT  93 26
HC659_RS04260  848200 ..  848231 - -17.5  -2.70932   CCGTCCTTGTAATGA      GAAAAGCCTCTCC TGAAAC GGAGAGGCTTTTC       TTTATTTTATACATT 100 27
       yfkAB NONE
        mscC  844980 ..  845000 - -10.5   -5.7827   AAGATAAATAAAAAA            CTGATTCCA ACT CGGAATCAG            TTTTTTTGTTTATTG 100 35
HC659_RS04225  841676 ..  841700 - -14.3  -4.49311   ACCATTAGCATAAAA          GCCTCCTGACA TGA TGTCGGGAGGC          TTTTTGATTAAGAAG 100 33
HC659_RS04205  839404 ..  839427 -  -8.8  -5.42265   GGAAATGATAAAAAA          GACTCGCCGA GTTT CCGGCCAGTC           TCCATTATTTACGAA 100 30
HC659_RS04200  838117 ..  838136 - -10.7  -5.74288   AGAAATAAGAAAAAA            CGGACGC TCTTGG GCGTCCG             TTTTTTTGTTGCTTA 100 38
HC659_RS04190  832932 ..  832952 - -16.9  -4.78326   GTTTAAATAAAGAAA            GCTGCTCGC TTA GCGAGCAGC            TCTTTTTTTATGCCT 100 33
HC659_RS04160 NONE
HC659_RS04155 NONE
HC659_RS04150  823994 ..  824012 -  -3.2   -4.1922   AAAAACAAAACAGAA             TCCTGTTT ATC AAACAAAA             GAAGCTAAAAATTCC  59 40
        ltaS  819864 ..  819885 - -15.9  -5.63517   CTGTCAAATAAAAAA           GCGGAGAGG TTGC CCTCTCCGC            TTTTTCTTATTTATC 100 32
         map  817557 ..  817576 -  -3.4  -3.62096   TTGGAGGAGGTTAAA            CCTGCCGG AAGC CCGGAATG             TGTTTTACAGTTTCG  50 30
HC659_RS04115  817157 ..  817177 - -15.4  -4.34759   GACAATATCAAGAAA            GCCGGGCG CATAT CGCCCGGC            TCATGTTTTATTGTT 100 33
HC659_RS04110 NONE
HC659_RS04105  816595 ..  816618 -   -11  -5.47159   GTTGAATAGAAAAAA          GCCGCGCA TATCAACG TGCGCGGC           TTTGCCATATTTAAG 100 36
HC659_RS04095  815542 ..  815554 -  -2.7  -3.40403   CCGCTCCTATGATAA                CTCAA TCG TTAAG                CCGAATTACTTTTAT  46 52
HC659_RS04045  804675 ..  804698 -  -3.1  -3.72893   TATTTTTTTAGTAAA          GAAAGCTGC GTTTTT ACTGCTTTC           TCATGAAAGCATCAT  52 15
        yfmC  803599 ..  803622 -  -9.6  -3.80855   GGTTGCAAAAACGAA          GAAGCAAGGA TTTC CCCTCGCTTC           TCATTTGTCCTATTT  81 35
HC659_RS04035 NONE
        yfmE NONE
        yfmF  800704 ..  800726 -  -9.8  -3.72395   ATAAGGGAAAATGAA           GGCTGTCACG TTT CTCGACAGCC           CTAGGGATTTCCTCT  84 46
HC659_RS04015  797087 ..  797097 -    -4  -4.15044   CTTTTGGTCAATAAA                 GTAA TGT TTAC                 TTATTAATTAAACAC  58 83
HC659_RS04010  795620 ..  795638 - -11.7  -4.80455   CATCGAAACACAAAA             GGAGGGC AAAAA GCCCTCC             CGTTTTCATCTTCAT 100 41
HC659_RS03995  792196 ..  792215 -  -8.5  -5.16237   AATGGCAGTAAAAAA            CCCGCCC TTTAGC AGGCGGG             TTTTTTTATAAATTA 100 38
HC659_RS03955  783266 ..  783289 - -14.6  -5.31158   TAAAAAAAGGAAAAA          GCCGGCGGGTG AGG CACC-GCCGGC          TGAAAAGAGATTATT 100 36
HC659_RS03950  782488 ..  782513 -  -6.2  -2.57069   CTTATGAAAGAAACG         CCGTCAGCCTG ATTAG CAG-CTGACAG         TATTTTCGATATTCA  54 12
HC659_RS03945  781133 ..  781154 - -11.5  -5.14965   AGCTGGATTAAAAAA           CCCCCTGCC GCCT GGCAGGGGT            TTTTTCAGCTATGCC 100 30
HC659_RS03905  769279 ..  769300 - -11.7  -4.51363   TATTAAATAGGAAAA           GTCCAGAAA GTGA TTTCTGGAC            TTTTTAGTCTTGCTC  95 29
        yetL  767429 ..  767450 - -14.5  -5.72622   GTCATAAAGAAAAAA           CAGCCGGAT GCGT ATCCGGCTG            CAGAAGAAAAGACGC 100 69
HC659_RS03870  763815 ..  763834 - -13.6  -5.82172   AGTAACATAAAAAAA            TCAGCCGG GAAA CCGGCTGA             TTATTAAAATGAGCA 100 29
HC659_RS03865  763349 ..  763377 - -13.1  -4.46233   TCAATGTCAAAGAAA        GCGCAGGGCGG AATCGAA CCGCCGTGCGC        AACAGTTTATTCTTT 100 32
        hmoA  762931 ..  762950 -  -8.6    -5.252   GACTCTTAGAAAAAA            GCTTGCAGC AAG GC-GCAAGC            TTTTTATTGATTGTA 100 29
HC659_RS03675 NONE
HC659_RS03670  722915 ..  722940 -  -6.9  -5.24129   TTGGTTTATAAAAAA         TAGCTCAGC AGAGTAGG GCTGAGCCA          TTTTTTAATTATAGA  90 34
HC659_RS03665 NONE
HC659_RS03660  722000 ..  722019 -  -2.1  -5.78622   CGACCGCAAAAAAAA            TTTTCGG TGCTGT CCGCAAA             AGGGAGTTTGGGTGT  83 137
HC659_RS03635  714619 ..  714633 -  -5.6  -4.63932   GACCCGCCAAGAAAA               GGCTGC GAC GAAGCC               CTCCTGCGGACAATT  74 227
HC659_RS03615  707785 ..  707802 -  -9.1   -5.4756   AACGCTAATAAAAAA             GCAGCCC TTAG AGGCTGC              TTTTTTTATGGTCAA 100 37
        opuE  702648 ..  702670 - -14.2  -4.57533   AACAAGAGCACAAAA           GCCACCAAGC TGC GCTTGATGGC           TTATTGCTTACTTTT 100 33
HC659_RS03590  701846 ..  701871 - -13.4  -5.03994   GTGTAGATAGAAAAA         GCCAATGGGA TTCCAG TCCCATTGGC          TTTTATAATGTATCA 100 28
HC659_RS03560  692584 ..  692623 - -13.9  -3.53224   GAGTCTTCTTCCAAA TAAA-AAACCGCCC-TGCC GTCT GGCAAGGGCGGTTTCTTTA  TGAAACAAATTGATG 100 23
HC659_RS03540  689116 ..  689140 -   -13  -5.93809   TGGGCATAAAAAAAA          GCTTGATCAC GTTTT GTGATCAAGC          TTTTCCATTTATCCG 100 34
HC659_RS03530  687266 ..  687285 - -10.7  -4.32651   AATAAGTGAGGAAAA            CCCGCAG ATGAAG CTGCGGG             TTTTTTTATTATGTA  90 34
        gabP  660964 ..  660987 -   -14  -5.14949   AAGAAAATAACAAAA          TCCTAAACGG CAGG CCGTTTAGGA           TTTGATCAGCATTAA 100 37
        cotA  659278 ..  659296 -  -8.9  -5.32944   TTCATAAGGAAAAAA             CTTGCCT GCTAG AGGCAAG             TTTGTCGGGTTATTT 100 35
HC659_RS03400 NONE
HC659_RS03395 NONE
HC659_RS03390  656962 ..  656986 -  -5.7  -5.82281   AAACAGACAAAAAAA          GCCCTAAAC GTTTACA GTTTTGGGC          TTCTTTCTTCGTATT  91 140
HC659_RS03385  656726 ..  656747 - -10.1  -5.20534   ATTAACTAATAAAAA           CCACTCGGC ATAA GCTGAGTGG            CTTTTTTAATGGACG 100 31
        bdhA  653721 ..  653744 - -15.4  -5.68023   GGATAATTAAAAAAA          GAATCCGCAC CCGA GTGCGGATTC           TTTTTGGTTTCAAAT 100 40
HC659_RS03360  650641 ..  650665 -   -10  -4.26188   CTCATACAGTGAAAA          GTCCGGAGTG ATCAG CACTCGGGAC          TTTTTTATTTAGGAG  86 30
        gutR  640533 ..  640566 -   -14  -4.45738   GACTTTAATAAGAAA     CGAAAGGCCAACTG CGACTT CAGTTGGCCTTTCC      TATTTATAATAAAGA 100 72
HC659_RS03245 NONE
HC659_RS03240  624553 ..  624576 - -12.6  -5.64873   GGCAATAATAAAAAA          TCCATTTCTC ATGC GAGAAATGGA           TTTTCTTTATTTTTG 100 32
HC659_RS03215  620342 ..  620361 - -12.2  -4.82901   TTCTGTGGATAAAAA            GCACCTCT AAAA AGAGGTGC             TTGACTTTTAATCTT 100 33
HC659_RS03150  609724 ..  609755 - -20.4  -3.45832   TAATGTCACAATTAA      GAAGGTGCTCAAGA AGTT TCTTGAGCACCTTC       CCACTGGATTAAGCA 100 34
        pbuE  600957 ..  600976 - -10.8  -5.42265   CTAAATCATAAAAAA            TCCTCCTT TTAC AAGGAGGA             TTTTTTTGCTGTTTG 100 14
HC659_RS03090 NONE
HC659_RS03085  598066 ..  598101 -  -4.2  -5.24551   GGAAATGAAGAAAAA    GGCATAACATAT GAGCTGTATAAA ATATGTTACGCC     TTTTCATTTGTCTAT  76 57
        phoB  595923 ..  595957 -  -7.9  -4.72272   TTCCTCCATTAAAAA     GAGATCCCGTTACTT CATAC AAGCAACGGGACACC     TTGTAATCTTTTACT  88 36
HC659_RS03070  595160 ..  595186 - -19.6  -5.44198   AACAAATAAGAAAAA         GAACTCCCGTAC CTT GTACGGGAGTTC         TTGATTTAAAACTTG 100 31
HC659_RS03050  590727 ..  590743 -  -8.7  -5.66684   GAATTCATAAAAAAA              CCTGACA TGA CGTCAGG              TTTTTTGTTTTATTT 100 39
HC659_RS03040 NONE
HC659_RS03035  588026 ..  588058 - -21.5  -4.65895   GGCTGTACTTAAAAA      CAAAGAGCCCGGAAA ACA TTCCCGGGCTCTTTG      TTTTATTTCCATTCT 100 28
HC659_RS03020  584090 ..  584111 -   -13   -5.0133   TATTTCCCGAAAAAA           GCGGCTCC ATTTAG GGAGCCGC            TTTCTTATGCTTTTT 100 30
HC659_RS03015  582532 ..  582558 - -11.7  -5.14965   ATTTTCATCAAAAAA        CTCCTGCTCTCA TTTT TGAG-GCAGGAG         TTTCGAGTGTTATTG 100 35
        vmlR  580562 ..  580579 -  -9.9   -5.4433   ACATATAAAGAAAAA             GGACAAC AGCT GTTGTCC              TTTTCAATGCCGCTT 100 53
HC659_RS02990 NONE
HC659_RS02985 NONE
        cotP  577209 ..  577219 -  -3.2  -4.37067   CAAATATGAGGAAAA                 TGCG TTA CACA                 CTTGATTATTTAAAT  62 409
HC659_RS02970 NONE
HC659_RS02965  575748 ..  575758 -  -5.4  -4.13945   ATTTTTACGCTAAAA                 GCTT GGA AAGC                 AGCTCTTGGATCGCA  65 4
HC659_RS02960  575372 ..  575392 -  -9.7  -4.59944   ATCAGCAGAAATAAA            GCCGCCT GATAAAG AGGCGGC            AGATCGTTATATGTC  91 43
HC659_RS02955  574948 ..  574963 -  -7.6  -5.57054   AATAAGGCAAAAAAA              GAACTC AAAT GAGTTC               TTTTTTTATTCTTCA 100 31
        mneP  570949 ..  570967 -  -9.6  -5.40464   CATCATAAAGAAAAA             GCTCCTTC TAA AAAGGAGC             TTTTCACTCTTCGAA 100 29
HC659_RS02925  569997 ..  570015 -  -5.3  -5.13354   TGCATAAAAAATAAA             CCCTCTA GTTAG TAGAGAG             TCAAGGGAGATAAAA  81 55
HC659_RS02920  569245 ..  569257 -  -4.8  -2.67255   TAACAGAATATTAAC                CTCC TTTGT GGAG                CCGCTTCATTAAAGC  49 34
HC659_RS02915  567757 ..  567776 -  -7.9   -5.0916   TGTGTAATAGAAAAA            GCAGATC TTTAAT GATCTGC             TTTTTTTGCATATGG  93 410
HC659_RS02895 NONE
HC659_RS02890  563002 ..  563012 -  -6.8  -2.90075   GCGGTTTGAATGACA                 GCTG TTT CAGC                 GTCTTTTGGAAAGAA  58 21
HC659_RS02885  562279 ..  562293 -  -3.5  -3.80841   AGGAGCATTAGGAAA              CGC-CC TATT GGTGCG               CATGTTAGAAGAAGA  53 211
HC659_RS02875  560924 ..  560952 -  -3.2  -5.14563   TGTTTCACTAAAAAA        GAGATCAAGC CTAATGATC GCTTGATCTG        ATAATAACAAGGGTT  73 79
HC659_RS02865  558356 ..  558377 - -11.7   -3.1169   AGAACCTTAAAAGGA           GATACCAAC CGAT GTTGGTATC            TTTTTTGTTTTAGAG  84 35
HC659_RS02835  552709 ..  552734 -   -12   -4.1347   TCTGAATTATAGAAA         TACCAAGGGT GTCAAA ACCCTTGGTA          TTTTTTCTGCCAAAA  93 62
HC659_RS02825  551163 ..  551177 -  -2.7  -2.69468   TAGCTTTACATATGA               GGCCC TCCTT GTGCC               ATTCCCCACTTACAC  41 1
HC659_RS02820  550455 ..  550471 - -10.8  -4.00468   ACGATAACTCAGAAA              GCCCGC TTTTC GCGGGC              TCGATTGAAGCAGAT  89 53
HC659_RS02805  547346 ..  547370 - -11.5  -4.54047   CGATCGCATACAAAA          TACCAAGGGCC AGC AACCCTTGGTA          TTTTTATACCTTCAT  95 73
HC659_RS02795  545909 ..  545940 - -13.2  -3.05384   TCTTTCGGTATCCAA      TAATACCAAGGGTA TAAC TGCCCTTGGTATTA       TGTTCTGCTGCACAT  93 220
HC659_RS02790  544387 ..  544406 -  -6.5  -5.24796   TCTATAGAAGAAAAA            CAAGCAT AGTAAG ATGCTTG             TTTTTTTCTTAGGAC  86 285
HC659_RS02765  538633 ..  538643 -  -5.4  -4.82901   GGTTCTTCATAAAAA                 GCTT GGA AAGC                 CTCTCTCCAAAAGAA  76 367
HC659_RS02755  536711 ..  536751 -  -8.4  -3.10878   ATTAGGTCAATAAAT GCCC-TAACGGAGAGAAGT AGTC ACTTTACTCCATTAAGGGC  GGAGAAGTGCTACTG  67 183
HC659_RS02750  535753 ..  535775 -  -9.3  -4.28432   AAGGTTAATTGAAAA           GCAAACTAT ATAAA ATAGTTTGC           TTTTCTTTTTGTTAT  86 37
HC659_RS02745 NONE
HC659_RS02735  532068 ..  532106 -  -9.7  -5.15634   GAGTCCACTAAAAAA  GTGCTGACCTCTGCACAAC ATC GTTGCGC-GA-GTCTGCAC  TTTTATTCTGCGATT 100 55
HC659_RS02720  528253 ..  528268 -  -2.6  -5.23396   AATAAGTAATAAAAA              CTCTTA TCTA TAAGAA               ATAATTCTTGAGGAC  70 156
HC659_RS02715  527488 ..  527516 - -10.3  -4.25283   ATTTTGTGACTAAAA        CTGACCACTTACT TTA AGTAGGTGGTCTG        ATTTGTCCGCAAAAG  90 144
        cmpA  525900 ..  525919 -  -6.4  -5.09259   TATGGTAAAATAAAA            GCACTGCT TACG AGCAGTGT             TTTTTCCTATAGAAA  86 13
HC659_RS02595  514338 ..  514382 - -19.7  -4.12902   CAATCACGCTGAAAA GATGACAAAATCCTAAAATGA AAA CCATTTTAGGATTTTGTCAAC AATCTGAAGCGACGG 100 41
HC659_RS02565  507119 ..  507146 -  -9.3  -5.26907   GAAGACAAAATAAAA        CATGAACACGA TGTCAC TCATGTTCATG         TTCATGTAGAGCCTG 100 69
        fbpA NONE
        fbpB  505740 ..  505754 -  -7.1  -5.96219   GAGTCATAAAAAAAA               GAGCC TTACC GGCTC               TTTTTATGTATTGTT 100 29
        dctB NONE
HC659_RS02500  495142 ..  495164 -   -15  -4.01939   GAAGGCATAATCAAA           GCCCAAAACA TCA TGTTTTGGGC           TTGTCTCTTTACTCG 100 34
HC659_RS02475  492364 ..  492377 -  -3.9  -3.87075   ATCACCTCTCATAAA               TGATT TACC AATCA                ATAACCGCTCCTGAT  56 70
HC659_RS02470  492043 ..  492069 - -12.4  -4.96848   GGTCCCATATAAAAA         GACATCGTTTCA GTT CGAAACGATGCC         TTCTGTATCTAATGA 100 43
HC659_RS02465  490552 ..  490580 - -13.3  -5.00616   GCTTTTGCGAAAAAA        TAAAAACCGGCTT TAG AAGCCGGTTTTTT        TATCGAAACGTATCT 100 25
HC659_RS02460 NONE
HC659_RS02455  489990 ..  490011 - -12.3  -5.44119   GTTATTCTAAAAAAA           CAGAGGCCC CAAA AGGCCTCTG            TTTTTTGTTGGAAAC 100 55
HC659_RS02400  474977 ..  474999 - -13.5  -4.44667   GGTTTTAATAAGAAA           GGCTGGATC ATAAA GATCCAGCC           TTTTTTGCGTTCCCT 100 40
HC659_RS02370  470368 ..  470403 - -12.7  -4.45083   TGTACATTCATAAAA    GAAGAAGCCCGTCCAC TTTAT GTGG-CGGGCTTCTTT    GCAGTTGCACAGACG 100 7
HC659_RS02345  462506 ..  462525 - -10.7  -4.53303   CAGTTTCATAGAAAA            CGCGCCT CATGAC AGGCGCG             TTTTTTATGTGTGAT  95 425
HC659_RS02295  455174 ..  455197 -  -9.6  -5.85011   GAAAAATGAAAAAAA          CCCTTCACAA CATT TTGTGAGGGG           TTCTATTTTGTGTCG 100 28
HC659_RS02285  453700 ..  453711 -  -5.8   -4.9218   CATTCATGACAAAAA                GAGC GGCC GCTC                 ATTTGTCAAACGTTT  78 395
        ycnK NONE
        ycnJ NONE
HC659_RS02240  445568 ..  445594 - -11.6  -5.19879   GGTTAAACATAAAAA         GCGACCCAGACA TGA CATCTGGATCGC         TTTCTTTATTAGGCA 100 34
        gabR  439256 ..  439282 -  -2.3  -5.85244   AAGCAAAAGAAAAAA        CGTGCAGCACCT GTGC AGATG-TGCAGG         TTGCCAAATCGACTT  91 197
HC659_RS02205 NONE
        nfsA  437910 ..  437934 - -17.9  -4.06055   ACCGGGTAAATGAAA          GGCCTGCCGGA AAA TCCGACAGGCC          GAATAAGAGCTTATT 100 36
HC659_RS02195 NONE
HC659_RS02190  435428 ..  435452 - -12.2  -5.13016   AAGTAAAACCAAAAA         GAGCCTCCGCT AAGT AGCGG-GGCTC          TTTTTTTGTTAATCA 100 38
HC659_RS02165  430019 ..  430040 - -15.9  -5.37043   AGGTGATATAAAAAA           TAGCGGGCG CTGC CGCCCGCTA            TTTATGTACGATTAA 100 37
HC659_RS02160  429749 ..  429761 -  -3.4  -4.18401   GCATATACTGCAAAA                CTGT GGCGG ACAG                GGTTCCGCAGAGACG  59 50
HC659_RS02155  429565 ..  429589 - -14.3  -5.40072   TTCTTTTCAAAAAAA          CACCGCAGGAC ATA GTCTTGCGGTG          CCGCCTTCATGGAGA 100 51
HC659_RS02130 NONE
HC659_RS02125  423533 ..  423575 -  -7.8  -5.65513   GAGGAAGCAAAAAAA TGATAAAAAGAGCGGGGG GATGCGG CCGCCGCTCTTTTTATGT TCACTTCTATATAAA 100 90
HC659_RS02105  419186 ..  419204 -  -2.2   -5.0133   TATCGTCTGAAAAAA             GCGCCCCC TCT AGGGGTTC             TTTTTTTTCGATTTA  66 16
HC659_RS02095  415633 ..  415660 - -17.8  -5.84381   GGATCAATAAAAAAA        CAGCCCGCAGAT CAAA ATCCGCGGGCTG         TTTCTGATTATAAGA 100 33
        bsdA NONE
        tcyA NONE
        tcyB NONE
        tcyC  408562 ..  408602 - -15.1  -4.12902   CAATCACGCTGAAAA  TCACAAAATCCTAAAACGA AAA TCGTTTTAGGATTTTATCA  ATAATCTGAAACAGG 100 64
HC659_RS02045  407652 ..  407670 -  -9.6  -6.14618   GAGAAAATAAAAAAA             CAAAGCCA AGG CGGCTTTG             TTTTAGTGTACAGGC 100 28
HC659_RS02040  406762 ..  406777 -  -4.7  -5.14477   CATAGACTGAAAAAA              CAAGG GGTGAT CCTTG               AGGCGATAGACCGTC  79 142
HC659_RS02030 NONE
HC659_RS02025  403908 ..  403942 - -13.8  -3.10975   ACCCACCATTCAATA     TAAAAGGATCAGCACT GTC AATGCTGATCCTTTTT     AAATTTGAGTTTTTT 100 8
        hxlA NONE
        hxlB  374043 ..  374063 - -16.9  -5.49579   TTAGAAAAAATAAAA            CCGGCCTGA TCT TCAGGCCGG            TTGTGTGATGCTATT 100 36
HC659_RS01980  372242 ..  372260 -  -5.3  -2.59458   AATGATAGTAAGTCA            TC-AGCCG TTTT CGGCTTGA             TTAATCATTTTAAAT  51 7
        nucA NONE
         nin  371168 ..  371192 -   -10  -2.73034   AAAGTTTATAAAGAG          TCCCTGAGAG TTATT CTCTCAGGGG          TTTTTCATTACACAG  74 33
HC659_RS01945  367598 ..  367614 -  -5.1  -2.97475   CGTCCGATTACAAAT              CAACGTC CTG AACGTCG              GCATCAATTTTTTTT  52 1
HC659_RS01940  366859 ..  366878 - -11.4  -5.82172   ATCAATAGAAAAAAA            GCCGTCCC ATGG GGAACGGC             TTTTTTTAATGAAAC 100 47
        nasB NONE
        nasC  357766 ..  357776 -  -2.6  -4.66264   GAAAAGTTCTAAAAA                 TTTT ATG AAAA                 ATTTAAATAGGTCTG  62 28
        nasD NONE
        nirD  354858 ..  354878 -  -7.6  -3.93769   ACTGTAAAAAATGAA            GGACCACT AGAAA AGTGATCC            GGTCTTTTGATCAAT  74 36
        cobA  353348 ..  353369 - -10.2  -5.05113   GGTACATAAATAAAA           CAGCCCTT GGGGGA AAGGGCTG            CCAGCCATCAGCTGT 100 33
HC659_RS01880  351210 ..  351229 -  -3.6  -3.94438   CAGCTGAAGAAAAGA            TGATTGTG CTGT CACAATAA             AACCTCCGCTCATGT  56 120
HC659_RS01875 NONE
HC659_RS01870  349446 ..  349469 - -12.6  -5.88476   AAAAGAAATAAAAAA          GAAACCAGTA CTTG TACTGGTTTC           GTCTTCACTTAAAAT 100 34
HC659_RS01830  340072 ..  340090 -   -16  -4.66609   CAGCCGATGTAAAAA             GCCGTGCG CAG CGCACGGC             TTTTTTTATCGTTTT 100 31
        tmrB  338598 ..  338616 -   -16  -4.22591   AATAAGTTGAAGAAA             GCCCGCTC TCG GAGCGGGC             TTTTGTCGTGTACAG 100 46
HC659_RS01805  335195 ..  335214 - -13.6  -3.30412   AAGACGAAAAAGAAT            GGCCGGAA GACA TTCCGGCC             GATCCCGAGCATTAT 100 384
HC659_RS01785  331888 ..  331912 - -17.3  -5.47159   GTGTAATAGAAAAAA          GCAGTACATGC CCA GCATGTACTGC          TTTTTTATGTTAATT 100 35
HC659_RS01755  323470 ..  323489 - -13.6  -4.36343   GAAGTAATGAAGAAA            GCAGCCTG TACC CAGGCTGC             TTTTTTTGCGTTAAG 100 36
HC659_RS01735  319875 ..  319889 -  -4.2  -4.61868   TATGTATAGAGAAAA               CCCTTT GTT AGAGGG               TTTCCAAAAAGCCAG  68 18
HC659_RS01730  318394 ..  318413 -  -9.3  -4.46656   GCTAGAATAGGAAAA            GCACCTC TTGAAT GAGGTGC             TTTCGCGTGTCGACA  91 253
HC659_RS01690  310312 ..  310335 -   -14  -4.46656   CCGATAACATGAAAA          GCAGTTTTCC CTAG GGAAAACTGC           TTTTTTTATAGAAAC 100 31
        cwlK  303171 ..  303189 -  -4.5  -2.63596   CCTGATTTTACAGCA             GGCAGTG ACCAG CACTGCA             AACTTGTCTATAAGC  46 101
HC659_RS01640 NONE
HC659_RS01635  298864 ..  298888 -   -13  -5.63517   TTTTCAAATAAAAAA          GGAAATAGCC GTCAT GGCTATTTCC          TTTTGGTGTTTTATT 100 36
        natR NONE
        natK  294046 ..  294070 - -15.9   -5.1925   TCATAATGGAAAAAA          CCTTGAAAAGC CAG GCTTTTCAAGG          TTTTTTTATTTCTGA 100 31
HC659_RS01600  292317 ..  292341 - -14.5  -5.34655   TAATGAAAAACAAAA          CCTTGAAGAAT GCT ATTCTTCAAGG          TTATTCTGCTTTCAG 100 26
        lmrA NONE
      lmr(B)  288085 ..  288107 - -10.6  -5.88197   GTAAACATAAAAAAA           GCCCCTGA ACATTAG TCAGGGGC           TTTTCATATTAATGA 100 34
         pcp  286227 ..  286237 -  -8.2  -3.70307   CTGAGGGAAGAAACA                 GCGG CGG CCGC                 TTAGTGCAGCGTACC  74 26
HC659_RS01535 NONE
HC659_RS01530 NONE
HC659_RS01450 NONE
HC659_RS01445  262156 ..  262194 - -11.1  -4.86939   CAATAAACGCAAAAA   GAGAAAGGTGTTCAGCC CATAT GTCTGAACACCCTTTTC   TTATGATATTTGTTT 100 26
        mmuM  261046 ..  261070 -  -9.4   -5.4505   CCTCCTAATAAAAAA          TCTCATGTCA GAAAG TGACACGAGA          CTCCGGCGAACCGGC 100 74
        mmuP  259562 ..  259583 - -14.5  -4.87318   GTGAAAACTGAAAAA           GAACCTGCC CGGA GGCAGGTTC            TTTTTATTTTGAATG 100 29
        nagB NONE
HC659_RS01405  254346 ..  254366 -  -9.7  -4.57073   TATGTTGGCGAAAAA            GTCCCCC GCAGCAG GGGGGAC            TTTTTTACTTCATTT  91 30
HC659_RS01400  252952 ..  252974 - -12.1   -5.7946   TGCTGAATAAAAAAA           GAACACCTC GTATT GAGGTGTTC           TTTTTTTCTATATGC 100 33
HC659_RS01340 NONE
HC659_RS01335  241369 ..  241388 -  -8.6  -6.14618   GACAAAATAAAAAAA            TGGATGCC GTTA AGCATCCA             TTTTACATCCGTTCT 100 15
HC659_RS01330  239058 ..  239091 -  -8.3  -5.75822   GATAAACTAAAAAAA     CTGCATGAGCATA TTTTAACT TATGTTCATGCAG      TTTTGTATTAAAGTT 100 39
HC659_RS01325 NONE
HC659_RS01320  237608 ..  237638 -  -8.4  -3.49114   GAGAGCAGAGGATAA       GCATCTCTGATT TGGGATT ATTCAGAGATGC       TTTTTTTGTATTTTT  72 12
        glpT NONE
HC659_RS01295  232444 ..  232465 - -10.2  -5.10765   AAATAAATAAGAAAA           CCTTGCGA TAGTTG TCGCAAGG            TTTTTTGCTTTTAAT 100 36
HC659_RS01285  230250 ..  230273 - -11.1  -5.38497   AGGTAAATCAAAAAA          GCTCTCTTC CTTATC GAAGAGAGC           TTTTTAATTACTTCT 100 33
      blaOXA  227982 ..  228010 -  -7.3  -2.82516   GTTTTGAGCATGAGA        TTTAGAGCCCTGC CGT GCAGGGCTCTTTT        ATTTAGGATGTGATC  61 28
HC659_RS01250  223513 ..  223530 - -12.7  -5.62045   ACAGAGAATAAAAAA             GAGCCGG ATCA CCGGCTC              GGTATAAGTTAAAAC 100 34
HC659_RS01245  222204 ..  222221 -  -3.4  -3.28785   GCTGAAAAGATGGAA             GTCACG ATTGAA CATGAC              AATGTTTTTATTCGT  48 487
        alkA  201838 ..  201850 -  -5.5  -3.91434   AAAGCATGCTAGAAA                TCCGA AAA CCGGA                GAGCCTATTGGAATG  63 176
HC659_RS01070 NONE
HC659_RS01065  192554 ..  192567 -  -5.3  -3.22482   AAGACTATAAGAAAT               GTTGA AGGA TCAAC                TGTTCTCCAAGCGGG  55 1
        murQ NONE
HC659_RS01055 NONE
HC659_RS01050 NONE
        amiE  187842 ..  187854 -  -4.1  -2.56011   TAAGCGGAAAGACAG                GTCTC ATA GAAAC                TTCCTCCTATCGTCT  45 47
        nagZ NONE
HC659_RS01035  184585 ..  184610 -  -9.1  -5.55664   TTAGCATGAAAAAAA         CCCTTACTTAT GTGT AAAAGTAAGGG          TCTTTCGTTCAGTAA 100 77
         btr  182860 ..  182887 -  -2.9  -3.42083   TGAACAGATATAACA        CCATGGACAAAT TCCTG ATTTAT-CATGG        ACAATCTCCGGATAG  46 20
        feuA NONE
HC659_RS01020 NONE
HC659_RS01015 NONE
HC659_RS01010  179059 ..  179078 -  -9.3  -5.75599   GAAAGCATAAAAAAA            CCGCTCA TAGGGT TGAGCGG             TTTTTTCCGTATAGC 100 10
        pdaB  159067 ..  159081 -  -2.8  -3.23921   TATAAAGCAAAAGCA               GTCCTC TAA GAAAAC               ATTTGTGTCATCGTT  45 186
        gerD  157945 ..  157975 -  -7.5  -4.42653   AGTGCAGGTATAAAA       GGTGAACCGGGAT TCCAG ATCCCGGCTTTCC       CTTTATTCACTTTCT  82 28
        abrB   44518 ..   44541 -  -9.7  -5.87996   TAAGCAATAAAAAAA          CGTTCTTGT GTCATA ACAAGAACG           TTTTTTGTACAAGAA 100 45
HC659_RS00110   23647 ..   23671 -  -7.2  -5.52384   CCCCCATGAAAAAAA          GACGTTTCCA AATTA TCGAAACGTC          TTTTTGACAACATTA 100 13
HC659_RS00105 NONE
HC659_RS00100   22269 ..   22290 - -11.7  -5.28942   TATTTTAAAGAAAAA           GTGAATCTC GACT GAGATTCAC            TTTTTTTGATTATCA 100 22
HC659_RS00065   14608 ..   14626 - -14.6  -3.69434   CCAAGCAAGCTTAAA             CCCAGCTC AAT GAGCTGGG             TTTTTTGTTTGTTAA 100 37
