I653_RS00005	SM00382	ATPases associated with a variety of cellular activities
I653_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
I653_RS00010	SM00480	DNA polymerase III beta subunit
I653_RS00030	SM00387	Histidine kinase-like ATPases
I653_RS00030	SM00433	TopoisomeraseII
I653_RS00035	SM00434	DNA Topoisomerase IV
I653_RS00070	SM00116	Domain in cystathionine beta-synthase and other proteins.
I653_RS00070	SM01240	I653_RS00070
I653_RS00075	SM00936	Penicillin-binding protein 5, C-terminal domain 
I653_RS00110	SM00257	Lysin motif
I653_RS00110	SM00636	I653_RS00110
I653_RS00125	SM00382	ATPases associated with a variety of cellular activities
I653_RS00135	SM00493	I653_RS00135
I653_RS00230	SM00465	GIY-YIG type nucleases (URI domain)
I653_RS00240	SM00966	SpoVT / AbrB like domain 
I653_RS00255	SM01208	I653_RS00255
I653_RS00260	SM00493	I653_RS00260
I653_RS00265	SM00650	Ribosomal RNA adenine dimethylases
I653_RS00310	SM01400	I653_RS00310
I653_RS00330	SM00487	DEAD-like helicases superfamily
I653_RS00330	SM00490	helicase superfamily c-terminal domain
I653_RS00330	SM00982	I653_RS00330
I653_RS00330	SM01058	CarD-like/TRCF domain
I653_RS00335	SM00966	SpoVT / AbrB like domain 
I653_RS00350	SM00363	S4 RNA-binding domain
I653_RS00370	SM00316	Ribosomal protein S1-like RNA-binding domain
I653_RS00385	SM00331	Sigma factor PP2C-like phosphatases
I653_RS00385	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
I653_RS00395	SM00220	Serine/Threonine protein kinases, catalytic domain
I653_RS00400	SM00977	TilS substrate C-terminal domain
I653_RS00410	SM00382	ATPases associated with a variety of cellular activities
I653_RS00455	SM00905	Dihydroneopterin aldolase
I653_RS00465	SM00530	Helix-turn-helix XRE-family like proteins 
I653_RS00545	SM00382	ATPases associated with a variety of cellular activities
I653_RS00545	SM01086	C-terminal, D2-small domain, of ClpB protein
I653_RS00550	SM00382	ATPases associated with a variety of cellular activities
I653_RS00560	SM00670	Large family of predicted nucleotide-binding domains
I653_RS00590	SM00840	I653_RS00590
I653_RS00595	SM00535	Ribonuclease III family
I653_RS00600	SM00967	RNA 2'-O ribose methyltransferase substrate binding
I653_RS00620	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
I653_RS00620	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
I653_RS00625	SM00649	Ribosomal protein L11/L12
I653_RS00655	SM00663	RNA polymerase I subunit A N-terminus
I653_RS00675	SM00838	Elongation factor G C-terminus
I653_RS00675	SM00889	Elongation factor G, domain IV
I653_RS00690	SM01403	I653_RS00690
I653_RS00710	SM01382	I653_RS00710
I653_RS00710	SM01383	I653_RS00710
I653_RS00725	SM00322	K homology RNA-binding domain
I653_RS00745	SM01374	I653_RS00745
I653_RS00750	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
I653_RS00815	SM00316	Ribosomal protein S1-like RNA-binding domain
I653_RS00835	SM00662	RNA polymerases D
I653_RS00845	SM00382	ATPases associated with a variety of cellular activities
I653_RS00850	SM00382	ATPases associated with a variety of cellular activities
I653_RS00885	SM00646	I653_RS00885
I653_RS00900	SM01251	I653_RS00900
I653_RS01015	SM00342	helix_turn_helix, arabinose operon control protein
I653_RS01115	SM00014	Acid phosphatase homologues
I653_RS01145	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
I653_RS01170	SM00448	cheY-homologous receiver domain
I653_RS01170	SM00862	Transcriptional regulatory protein, C terminal
I653_RS01175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
I653_RS01175	SM00388	His Kinase A (phosphoacceptor) domain
I653_RS01250	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS01270	SM00342	helix_turn_helix, arabinose operon control protein
I653_RS01330	SM00450	Rhodanese Homology Domain
I653_RS01350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS01350	SM00866	I653_RS01350
I653_RS01390	SM00387	Histidine kinase-like ATPases
I653_RS01395	SM00448	cheY-homologous receiver domain
I653_RS01400	SM01130	I653_RS01400
I653_RS01415	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
I653_RS01420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS01420	SM00895	I653_RS01420
I653_RS01425	SM00858	I653_RS01425
I653_RS01445	SM00448	cheY-homologous receiver domain
I653_RS01445	SM00862	Transcriptional regulatory protein, C terminal
I653_RS01450	SM00387	Histidine kinase-like ATPases
I653_RS01450	SM00388	His Kinase A (phosphoacceptor) domain
I653_RS01455	SM00382	ATPases associated with a variety of cellular activities
I653_RS01475	SM00327	von Willebrand factor (vWF) type A domain
I653_RS01515	SM00870	I653_RS01515
I653_RS01535	SM00387	Histidine kinase-like ATPases
I653_RS01540	SM00448	cheY-homologous receiver domain
I653_RS01540	SM00850	LytTr DNA-binding domain
I653_RS01545	SM00382	ATPases associated with a variety of cellular activities
I653_RS01580	SM00028	Tetratricopeptide repeats
I653_RS01590	SM00642	Alpha-amylase domain
I653_RS01600	SM00382	ATPases associated with a variety of cellular activities
I653_RS01655	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
I653_RS01660	SM00116	Domain in cystathionine beta-synthase and other proteins.
I653_RS01660	SM00382	ATPases associated with a variety of cellular activities
I653_RS01690	SM00632	I653_RS01690
I653_RS01690	SM00642	Alpha-amylase domain
I653_RS01710	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS01825	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
I653_RS01850	SM00833	Cobalamin synthesis protein cobW C-terminal domain
I653_RS01860	SM00062	Bacterial periplasmic substrate-binding proteins
I653_RS01890	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
I653_RS01890	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
I653_RS01900	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
I653_RS01920	SM00823	Phosphopantetheine attachment site
I653_RS01945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS01960	SM00382	ATPases associated with a variety of cellular activities
I653_RS01970	SM00062	Bacterial periplasmic substrate-binding proteins
I653_RS02010	SM00710	Parallel beta-helix repeats
I653_RS02010	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
I653_RS02035	SM00382	ATPases associated with a variety of cellular activities
I653_RS02045	SM00448	cheY-homologous receiver domain
I653_RS02045	SM00862	Transcriptional regulatory protein, C terminal
I653_RS02050	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
I653_RS02050	SM00387	Histidine kinase-like ATPases
I653_RS02050	SM00388	His Kinase A (phosphoacceptor) domain
I653_RS02055	SM00028	Tetratricopeptide repeats
I653_RS02090	SM00382	ATPases associated with a variety of cellular activities
I653_RS02120	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
I653_RS02125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS02160	SM00420	helix_turn_helix, Deoxyribose operon repressor
I653_RS02185	SM01329	I653_RS02185
I653_RS02225	SM00796	Allophanate hydrolase subunit 1
I653_RS02230	SM00797	Allophanate hydrolase subunit 2
I653_RS02235	SM00346	helix_turn_helix isocitrate lyase regulation
I653_RS02310	SM00344	helix_turn_helix ASNC type
I653_RS02315	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
I653_RS02315	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
I653_RS02315	SM00493	I653_RS02315
I653_RS02325	SM00267	diguanylate cyclase
I653_RS02410	SM00091	PAS domain
I653_RS02410	SM00387	Histidine kinase-like ATPases
I653_RS02415	SM00448	cheY-homologous receiver domain
I653_RS02430	SM00382	ATPases associated with a variety of cellular activities
I653_RS02470	SM00487	DEAD-like helicases superfamily
I653_RS02470	SM00490	helicase superfamily c-terminal domain
I653_RS02500	SM01005	Alanine racemase, C-terminal domain
I653_RS02525	SM00387	Histidine kinase-like ATPases
I653_RS02530	SM00331	Sigma factor PP2C-like phosphatases
I653_RS02550	SM00331	Sigma factor PP2C-like phosphatases
I653_RS02550	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
I653_RS02565	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS02570	SM00316	Ribosomal protein S1-like RNA-binding domain
I653_RS02570	SM00732	Likely ribonuclease with RNase H fold.
I653_RS02575	SM00731	SprT homologues.
I653_RS02620	SM00220	Serine/Threonine protein kinases, catalytic domain
I653_RS02620	SM01260	I653_RS02620
I653_RS02625	SM00220	Serine/Threonine protein kinases, catalytic domain
I653_RS02625	SM01260	I653_RS02625
I653_RS02630	SM00382	ATPases associated with a variety of cellular activities
I653_RS02645	SM00530	Helix-turn-helix XRE-family like proteins 
I653_RS02660	SM00357	Cold shock protein domain
I653_RS02665	SM01058	CarD-like/TRCF domain
I653_RS02670	SM00342	helix_turn_helix, arabinose operon control protein
I653_RS02680	SM00342	helix_turn_helix, arabinose operon control protein
I653_RS02680	SM00871	Bacterial transcription activator, effector binding domain
I653_RS02685	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS02715	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS02765	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
I653_RS02795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
I653_RS02795	SM00387	Histidine kinase-like ATPases
I653_RS02795	SM00388	His Kinase A (phosphoacceptor) domain
I653_RS02800	SM00448	cheY-homologous receiver domain
I653_RS02800	SM00862	Transcriptional regulatory protein, C terminal
I653_RS02810	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS02820	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
I653_RS02835	SM00387	Histidine kinase-like ATPases
I653_RS02840	SM00421	helix_turn_helix, Lux Regulon
I653_RS02840	SM00448	cheY-homologous receiver domain
I653_RS02860	SM00422	helix_turn_helix, mercury resistance
I653_RS02860	SM00871	Bacterial transcription activator, effector binding domain
I653_RS02960	SM00382	ATPases associated with a variety of cellular activities
I653_RS02975	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS02990	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS02990	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
I653_RS03005	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS03005	SM00895	I653_RS03005
I653_RS03010	SM00257	Lysin motif
I653_RS03010	SM00636	I653_RS03010
I653_RS03025	SM00098	Alkaline phosphatase homologues
I653_RS03045	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
I653_RS03080	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS03080	SM00866	I653_RS03080
I653_RS03170	SM00382	ATPases associated with a variety of cellular activities
I653_RS03180	SM00881	CoA binding domain
I653_RS03205	SM00883	Chaperonin 10 Kd subunit
I653_RS03220	SM00028	Tetratricopeptide repeats
I653_RS03225	SM00829	Enoylreductase
I653_RS03270	SM00829	Enoylreductase
I653_RS03330	SM00460	Transglutaminase/protease-like homologues
I653_RS03370	SM01001	AIR carboxylase
I653_RS03380	SM00998	Adenylosuccinate lyase C-terminus
I653_RS03395	SM01211	I653_RS03395
I653_RS03420	SM00798	AICARFT/IMPCHase bienzyme
I653_RS03420	SM00851	MGS-like domain
I653_RS03425	SM01209	I653_RS03425
I653_RS03425	SM01210	I653_RS03425
I653_RS03430	SM00344	helix_turn_helix ASNC type
I653_RS03475	SM00278	Helix-hairpin-helix DNA-binding motif class 1
I653_RS03475	SM00292	breast cancer carboxy-terminal domain
I653_RS03475	SM00532	Ligase N family
I653_RS03510	SM00845	GatB domain
I653_RS03525	SM00046	Diacylglycerol kinase catalytic domain (presumed)
I653_RS03605	SM00028	Tetratricopeptide repeats
I653_RS03670	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
I653_RS03670	SM00387	Histidine kinase-like ATPases
I653_RS03675	SM00342	helix_turn_helix, arabinose operon control protein
I653_RS03675	SM00448	cheY-homologous receiver domain
I653_RS03700	SM00342	helix_turn_helix, arabinose operon control protein
I653_RS03860	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
I653_RS03865	SM00382	ATPases associated with a variety of cellular activities
I653_RS03875	SM00422	helix_turn_helix, mercury resistance
I653_RS03895	SM00382	ATPases associated with a variety of cellular activities
I653_RS03900	SM00487	DEAD-like helicases superfamily
I653_RS03900	SM00490	helicase superfamily c-terminal domain
I653_RS03910	SM00829	Enoylreductase
I653_RS03915	SM00382	ATPases associated with a variety of cellular activities
I653_RS03945	SM00656	I653_RS03945
I653_RS03955	SM00387	Histidine kinase-like ATPases
I653_RS03960	SM00448	cheY-homologous receiver domain
I653_RS03975	SM00849	Metallo-beta-lactamase superfamily
I653_RS04050	SM00642	Alpha-amylase domain
I653_RS04055	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS04055	SM00866	I653_RS04055
I653_RS04085	SM00226	Low molecular weight phosphatase family
I653_RS04145	SM00478	endonuclease III
I653_RS04180	SM00861	Transketolase, pyrimidine binding domain
I653_RS04195	SM00382	ATPases associated with a variety of cellular activities
I653_RS04245	SM00382	ATPases associated with a variety of cellular activities
I653_RS04250	SM00382	ATPases associated with a variety of cellular activities
I653_RS04265	SM00387	Histidine kinase-like ATPases
I653_RS04270	SM00421	helix_turn_helix, Lux Regulon
I653_RS04270	SM00448	cheY-homologous receiver domain
I653_RS04275	SM00382	ATPases associated with a variety of cellular activities
I653_RS04320	SM00382	ATPases associated with a variety of cellular activities
I653_RS04350	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS04420	SM00287	Bacterial SH3 domain homologues
I653_RS04450	SM00478	endonuclease III
I653_RS04450	SM00525	I653_RS04450
I653_RS04480	SM00382	ATPases associated with a variety of cellular activities
I653_RS04650	SM01060	I653_RS04650
I653_RS04655	SM00382	ATPases associated with a variety of cellular activities
I653_RS04660	SM00062	Bacterial periplasmic substrate-binding proteins
I653_RS04695	SM00530	Helix-turn-helix XRE-family like proteins 
I653_RS04710	SM00567	E-Z type HEAT repeats
I653_RS04740	SM00763	PrkA AAA domain
I653_RS04750	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS04780	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS04785	SM00382	ATPases associated with a variety of cellular activities
I653_RS04790	SM00382	ATPases associated with a variety of cellular activities
I653_RS04800	SM00357	Cold shock protein domain
I653_RS04810	SM00267	diguanylate cyclase
I653_RS04840	SM00318	Staphylococcal nuclease homologues
I653_RS04850	SM00363	S4 RNA-binding domain
I653_RS04860	SM00116	Domain in cystathionine beta-synthase and other proteins.
I653_RS04905	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
I653_RS04905	SM00387	Histidine kinase-like ATPases
I653_RS04910	SM00421	helix_turn_helix, Lux Regulon
I653_RS04910	SM00448	cheY-homologous receiver domain
I653_RS04930	SM00257	Lysin motif
I653_RS04955	SM00098	Alkaline phosphatase homologues
I653_RS04960	SM00257	Lysin motif
I653_RS05020	SM00563	Phosphate acyltransferases
I653_RS05025	SM01091	Transporter associated domain
I653_RS05030	SM00422	helix_turn_helix, mercury resistance
I653_RS05040	SM01091	Transporter associated domain
I653_RS05095	SM00382	ATPases associated with a variety of cellular activities
I653_RS05100	SM00382	ATPases associated with a variety of cellular activities
I653_RS05150	SM00729	Elongator protein 3, MiaB family, Radical SAM
I653_RS05180	SM00382	ATPases associated with a variety of cellular activities
I653_RS05200	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
I653_RS05235	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS05265	SM00382	ATPases associated with a variety of cellular activities
I653_RS05350	SM01022	I653_RS05350
I653_RS05365	SM00849	Metallo-beta-lactamase superfamily
I653_RS05405	SM00829	Enoylreductase
I653_RS05415	SM00855	Phosphoglycerate mutase family
I653_RS05435	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
I653_RS05450	SM00914	I653_RS05450
I653_RS05465	SM00894	Excalibur calcium-binding domain
I653_RS05500	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS05525	SM00354	helix_turn _helix lactose operon repressor
I653_RS05655	SM00342	helix_turn_helix, arabinose operon control protein
I653_RS05660	SM00354	helix_turn _helix lactose operon repressor
I653_RS05680	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS05725	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
I653_RS05755	SM00316	Ribosomal protein S1-like RNA-binding domain
I653_RS05765	SM00752	Horizontally Transferred TransMembrane Domain
I653_RS05840	SM00859	Semialdehyde dehydrogenase, NAD binding domain
I653_RS05860	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
I653_RS05865	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
I653_RS05915	SM00825	Beta-ketoacyl synthase
I653_RS05925	SM00382	ATPases associated with a variety of cellular activities
I653_RS05930	SM00382	ATPases associated with a variety of cellular activities
I653_RS05975	SM00382	ATPases associated with a variety of cellular activities
I653_RS05980	SM00382	ATPases associated with a variety of cellular activities
I653_RS06040	SM01118	I653_RS06040
I653_RS06050	SM00954	Region found in RelA / SpoT proteins
I653_RS06345	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
I653_RS06345	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
I653_RS06395	SM00382	ATPases associated with a variety of cellular activities
I653_RS06405	SM00835	Cupin
I653_RS06435	SM00829	Enoylreductase
I653_RS06455	SM00354	helix_turn _helix lactose operon repressor
I653_RS06465	SM00858	I653_RS06465
I653_RS06480	SM00382	ATPases associated with a variety of cellular activities
I653_RS06485	SM00028	Tetratricopeptide repeats
I653_RS06500	SM00257	Lysin motif
I653_RS06500	SM00644	I653_RS06500
I653_RS06525	SM00530	Helix-turn-helix XRE-family like proteins 
I653_RS06540	SM00382	ATPases associated with a variety of cellular activities
I653_RS06630	SM00257	Lysin motif
I653_RS06695	SM00257	Lysin motif
I653_RS06695	SM00644	I653_RS06695
I653_RS06740	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
I653_RS06765	SM00382	ATPases associated with a variety of cellular activities
I653_RS06780	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
I653_RS06790	SM00382	ATPases associated with a variety of cellular activities
I653_RS06850	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
I653_RS06865	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS06880	SM00855	Phosphoglycerate mutase family
I653_RS06905	SM00382	ATPases associated with a variety of cellular activities
I653_RS06920	SM00448	cheY-homologous receiver domain
I653_RS06920	SM00862	Transcriptional regulatory protein, C terminal
I653_RS06925	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
I653_RS06925	SM00387	Histidine kinase-like ATPases
I653_RS06925	SM00388	His Kinase A (phosphoacceptor) domain
I653_RS06945	SM00116	Domain in cystathionine beta-synthase and other proteins.
I653_RS06945	SM00924	MgtE intracellular N domain
I653_RS06950	SM00422	helix_turn_helix, mercury resistance
I653_RS06960	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS06995	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
I653_RS07000	SM00052	Putative diguanylate phosphodiesterase
I653_RS07000	SM00267	diguanylate cyclase
I653_RS07050	SM00091	PAS domain
I653_RS07050	SM00387	Histidine kinase-like ATPases
I653_RS07050	SM00388	His Kinase A (phosphoacceptor) domain
I653_RS07090	SM01007	Class II Aldolase and Adducin N-terminal domain
I653_RS07115	SM00387	Histidine kinase-like ATPases
I653_RS07115	SM00388	His Kinase A (phosphoacceptor) domain
I653_RS07120	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS07135	SM00382	ATPases associated with a variety of cellular activities
I653_RS07135	SM01086	C-terminal, D2-small domain, of ClpB protein
I653_RS07165	SM00257	Lysin motif
I653_RS07170	SM00257	Lysin motif
I653_RS07175	SM00636	I653_RS07175
I653_RS07225	SM00354	helix_turn _helix lactose operon repressor
I653_RS07230	SM01061	CAT RNA binding domain
I653_RS07265	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
I653_RS07265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
I653_RS07285	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
I653_RS07285	SM00091	PAS domain
I653_RS07285	SM00387	Histidine kinase-like ATPases
I653_RS07285	SM00388	His Kinase A (phosphoacceptor) domain
I653_RS07295	SM00260	Two component signalling adaptor domain
I653_RS07295	SM00448	cheY-homologous receiver domain
I653_RS07310	SM00257	Lysin motif
I653_RS07325	SM00052	Putative diguanylate phosphodiesterase
I653_RS07420	SM00852	Probable molybdopterin binding domain
I653_RS07440	SM00382	ATPases associated with a variety of cellular activities
I653_RS07445	SM00382	ATPases associated with a variety of cellular activities
I653_RS07460	SM00382	ATPases associated with a variety of cellular activities
I653_RS07465	SM01066	Carbohydrate binding domain
I653_RS07470	SM00420	helix_turn_helix, Deoxyribose operon repressor
I653_RS07470	SM01134	I653_RS07470
I653_RS07495	SM00382	ATPases associated with a variety of cellular activities
I653_RS07515	SM00966	SpoVT / AbrB like domain 
I653_RS07520	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
I653_RS07520	SM00091	PAS domain
I653_RS07520	SM00387	Histidine kinase-like ATPases
I653_RS07520	SM00388	His Kinase A (phosphoacceptor) domain
I653_RS07540	SM00849	Metallo-beta-lactamase superfamily
I653_RS07575	SM00861	Transketolase, pyrimidine binding domain
I653_RS07665	SM00838	Elongation factor G C-terminus
I653_RS07685	SM00670	Large family of predicted nucleotide-binding domains
I653_RS07710	SM00878	Biotin carboxylase C-terminal domain
I653_RS07755	SM00116	Domain in cystathionine beta-synthase and other proteins.
I653_RS07805	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
I653_RS07865	SM00740	I653_RS07865
I653_RS07870	SM00740	I653_RS07870
I653_RS07925	SM00842	Cell division protein FtsA
I653_RS07930	SM00864	Tubulin/FtsZ family, GTPase domain
I653_RS07930	SM00865	Tubulin/FtsZ family, C-terminal domain
I653_RS07955	SM00382	ATPases associated with a variety of cellular activities
I653_RS07990	SM00363	S4 RNA-binding domain
I653_RS08015	SM00363	S4 RNA-binding domain
I653_RS08040	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
I653_RS08045	SM00851	MGS-like domain
I653_RS08045	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
I653_RS08045	SM01209	I653_RS08045
I653_RS08060	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
I653_RS08110	SM00831	Cation transporter/ATPase, N-terminus
I653_RS08125	SM00072	Guanylate kinase homologues.
I653_RS08130	SM01409	I653_RS08130
I653_RS08140	SM00487	DEAD-like helicases superfamily
I653_RS08140	SM00490	helicase superfamily c-terminal domain
I653_RS08165	SM00331	Sigma factor PP2C-like phosphatases
I653_RS08165	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
I653_RS08170	SM00220	Serine/Threonine protein kinases, catalytic domain
I653_RS08170	SM00740	I653_RS08170
I653_RS08185	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
I653_RS08205	SM01120	I653_RS08205
I653_RS08205	SM01121	I653_RS08205
I653_RS08220	SM00487	DEAD-like helicases superfamily
I653_RS08220	SM00490	helicase superfamily c-terminal domain
I653_RS08235	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
I653_RS08240	SM00822	I653_RS08240
I653_RS08250	SM00358	Double-stranded RNA binding motif
I653_RS08250	SM00535	Ribonuclease III family
I653_RS08255	SM00968	SMC proteins Flexible Hinge Domain
I653_RS08260	SM00382	ATPases associated with a variety of cellular activities
I653_RS08260	SM00962	SRP54-type protein, GTPase domain
I653_RS08260	SM00963	SRP54-type protein, helical bundle domain
I653_RS08275	SM00382	ATPases associated with a variety of cellular activities
I653_RS08275	SM00962	SRP54-type protein, GTPase domain
I653_RS08275	SM00963	SRP54-type protein, helical bundle domain
I653_RS08335	SM00881	CoA binding domain
I653_RS08345	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
I653_RS08345	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
I653_RS08345	SM00493	I653_RS08345
I653_RS08365	SM00382	ATPases associated with a variety of cellular activities
I653_RS08365	SM01086	C-terminal, D2-small domain, of ClpB protein
I653_RS08405	SM00382	ATPases associated with a variety of cellular activities
I653_RS08455	SM00448	cheY-homologous receiver domain
I653_RS08490	SM00962	SRP54-type protein, GTPase domain
I653_RS08500	SM00448	cheY-homologous receiver domain
I653_RS08505	SM00073	Histidine Phosphotransfer domain
I653_RS08505	SM00260	Two component signalling adaptor domain
I653_RS08505	SM00387	Histidine kinase-like ATPases
I653_RS08505	SM01231	I653_RS08505
I653_RS08510	SM00260	Two component signalling adaptor domain
I653_RS08570	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
I653_RS08580	SM00479	I653_RS08580
I653_RS08580	SM00481	DNA polymerase alpha chain like domain
I653_RS08590	SM00316	Ribosomal protein S1-like RNA-binding domain
I653_RS08590	SM00322	K homology RNA-binding domain
I653_RS08625	SM00904	Riboflavin kinase
I653_RS08630	SM01387	I653_RS08630
I653_RS08635	SM00316	Ribosomal protein S1-like RNA-binding domain
I653_RS08635	SM00322	K homology RNA-binding domain
I653_RS08665	SM00859	Semialdehyde dehydrogenase, NAD binding domain
I653_RS08675	SM01130	I653_RS08675
I653_RS08680	SM00849	Metallo-beta-lactamase superfamily
I653_RS08695	SM00382	ATPases associated with a variety of cellular activities
I653_RS08695	SM00843	I653_RS08695
I653_RS08700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS08700	SM00866	I653_RS08700
I653_RS08735	SM00530	Helix-turn-helix XRE-family like proteins 
I653_RS08745	SM00852	Probable molybdopterin binding domain
I653_RS08750	SM00382	ATPases associated with a variety of cellular activities
I653_RS08760	SM00322	K homology RNA-binding domain
I653_RS08760	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
I653_RS08775	SM00829	Enoylreductase
I653_RS08785	SM00729	Elongator protein 3, MiaB family, Radical SAM
I653_RS08800	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
I653_RS08800	SM00534	ATPase domain of DNA mismatch repair MUTS family
I653_RS08805	SM00853	MutL C terminal dimerisation domain
I653_RS08805	SM01340	I653_RS08805
I653_RS08825	SM00849	Metallo-beta-lactamase superfamily
I653_RS08835	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
I653_RS08840	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
I653_RS08845	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
I653_RS08855	SM00825	Beta-ketoacyl synthase
I653_RS08875	SM00822	I653_RS08875
I653_RS08875	SM00823	Phosphopantetheine attachment site
I653_RS08875	SM00825	Beta-ketoacyl synthase
I653_RS08875	SM00826	I653_RS08875
I653_RS08875	SM01294	I653_RS08875
I653_RS08885	SM00822	I653_RS08885
I653_RS08885	SM00823	Phosphopantetheine attachment site
I653_RS08885	SM00825	Beta-ketoacyl synthase
I653_RS08885	SM00826	I653_RS08885
I653_RS08885	SM01294	I653_RS08885
I653_RS08890	SM00822	I653_RS08890
I653_RS08890	SM00823	Phosphopantetheine attachment site
I653_RS08890	SM00825	Beta-ketoacyl synthase
I653_RS08890	SM00826	I653_RS08890
I653_RS08890	SM01294	I653_RS08890
I653_RS08895	SM00823	Phosphopantetheine attachment site
I653_RS08895	SM00825	Beta-ketoacyl synthase
I653_RS08895	SM01294	I653_RS08895
I653_RS08910	SM00849	Metallo-beta-lactamase superfamily
I653_RS08995	SM00646	I653_RS08995
I653_RS09000	SM00382	ATPases associated with a variety of cellular activities
I653_RS09015	SM00422	helix_turn_helix, mercury resistance
I653_RS09020	SM01230	I653_RS09020
I653_RS09070	SM00860	SMI1 / KNR4 family
I653_RS09150	SM00318	Staphylococcal nuclease homologues
I653_RS09160	SM01005	Alanine racemase, C-terminal domain
I653_RS09285	SM00257	Lysin motif
I653_RS09290	SM00857	Resolvase, N terminal domain
I653_RS09300	SM00861	Transketolase, pyrimidine binding domain
I653_RS09325	SM00448	cheY-homologous receiver domain
I653_RS09395	SM01207	I653_RS09395
I653_RS09400	SM00881	CoA binding domain
I653_RS09405	SM00387	Histidine kinase-like ATPases
I653_RS09405	SM00433	TopoisomeraseII
I653_RS09410	SM00434	DNA Topoisomerase IV
I653_RS09425	SM01067	Cellulose binding domain
I653_RS09445	SM00606	Cellulose Binding Domain Type IV
I653_RS09490	SM00878	Biotin carboxylase C-terminal domain
I653_RS09520	SM00823	Phosphopantetheine attachment site
I653_RS09520	SM00824	Thioesterase
I653_RS09525	SM00823	Phosphopantetheine attachment site
I653_RS09535	SM00823	Phosphopantetheine attachment site
I653_RS09540	SM00823	Phosphopantetheine attachment site
I653_RS09590	SM00829	Enoylreductase
I653_RS09610	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
I653_RS09625	SM00822	I653_RS09625
I653_RS09660	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
I653_RS09685	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
I653_RS09685	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
I653_RS09705	SM00656	I653_RS09705
I653_RS09720	SM00835	Cupin
I653_RS09750	SM00530	Helix-turn-helix XRE-family like proteins 
I653_RS09830	SM00860	SMI1 / KNR4 family
I653_RS09840	SM00860	SMI1 / KNR4 family
I653_RS09855	SM00342	helix_turn_helix, arabinose operon control protein
I653_RS09870	SM00849	Metallo-beta-lactamase superfamily
I653_RS09875	SM00871	Bacterial transcription activator, effector binding domain
I653_RS09890	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
I653_RS09930	SM00421	helix_turn_helix, Lux Regulon
I653_RS09930	SM00448	cheY-homologous receiver domain
I653_RS09935	SM00257	Lysin motif
I653_RS09940	SM00341	Helicase and RNase D C-terminal
I653_RS09940	SM00487	DEAD-like helicases superfamily
I653_RS09940	SM00490	helicase superfamily c-terminal domain
I653_RS09940	SM00956	I653_RS09940
I653_RS10025	SM00861	Transketolase, pyrimidine binding domain
I653_RS10030	SM00327	von Willebrand factor (vWF) type A domain
I653_RS10035	SM00382	ATPases associated with a variety of cellular activities
I653_RS10045	SM00257	Lysin motif
I653_RS10140	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
I653_RS10140	SM00245	tail specific protease
I653_RS10170	SM00014	Acid phosphatase homologues
I653_RS10210	SM00882	Coenzyme A transferase
I653_RS10215	SM00882	Coenzyme A transferase
I653_RS10275	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS10315	SM00382	ATPases associated with a variety of cellular activities
I653_RS10375	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
I653_RS10395	SM00357	Cold shock protein domain
I653_RS10435	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
I653_RS10435	SM00475	5'-3' exonuclease
I653_RS10490	SM00354	helix_turn _helix lactose operon repressor
I653_RS10505	SM00491	I653_RS10505
I653_RS10515	SM00981	I653_RS10515
I653_RS10535	SM00487	DEAD-like helicases superfamily
I653_RS10535	SM00490	helicase superfamily c-terminal domain
I653_RS10595	SM00478	endonuclease III
I653_RS10595	SM00525	I653_RS10595
I653_RS10620	SM00479	I653_RS10620
I653_RS10620	SM00487	DEAD-like helicases superfamily
I653_RS10620	SM00491	I653_RS10620
I653_RS10660	SM00851	MGS-like domain
I653_RS10710	SM00914	I653_RS10710
I653_RS10715	SM00028	Tetratricopeptide repeats
I653_RS10780	SM00138	Methyltransferase, chemotaxis proteins 
I653_RS10785	SM00562	I653_RS10785
I653_RS10815	SM00411	bacterial (prokaryotic) histone like domain
I653_RS10860	SM01240	I653_RS10860
I653_RS10865	SM00316	Ribosomal protein S1-like RNA-binding domain
I653_RS10900	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
I653_RS10920	SM00257	Lysin motif
I653_RS10930	SM00487	DEAD-like helicases superfamily
I653_RS10930	SM00490	helicase superfamily c-terminal domain
I653_RS10970	SM00091	PAS domain
I653_RS10970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
I653_RS10970	SM00387	Histidine kinase-like ATPases
I653_RS10970	SM00388	His Kinase A (phosphoacceptor) domain
I653_RS10975	SM00448	cheY-homologous receiver domain
I653_RS10975	SM00862	Transcriptional regulatory protein, C terminal
I653_RS10995	SM00363	S4 RNA-binding domain
I653_RS11135	SM00387	Histidine kinase-like ATPases
I653_RS11145	SM00936	Penicillin-binding protein 5, C-terminal domain 
I653_RS11185	SM00919	Malic enzyme, NAD binding domain
I653_RS11185	SM01274	I653_RS11185
I653_RS11200	SM00870	I653_RS11200
I653_RS11205	SM00530	Helix-turn-helix XRE-family like proteins 
I653_RS11305	SM00849	Metallo-beta-lactamase superfamily
I653_RS11335	SM00849	Metallo-beta-lactamase superfamily
I653_RS11345	SM01350	I653_RS11345
I653_RS11395	SM00382	ATPases associated with a variety of cellular activities
I653_RS11405	SM00062	Bacterial periplasmic substrate-binding proteins
I653_RS11405	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
I653_RS11415	SM00046	Diacylglycerol kinase catalytic domain (presumed)
I653_RS11425	SM00422	helix_turn_helix, mercury resistance
I653_RS11435	SM00861	Transketolase, pyrimidine binding domain
I653_RS11455	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
I653_RS11465	SM00091	PAS domain
I653_RS11465	SM00382	ATPases associated with a variety of cellular activities
I653_RS11510	SM00646	I653_RS11510
I653_RS11525	SM00448	cheY-homologous receiver domain
I653_RS11530	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
I653_RS11545	SM00363	S4 RNA-binding domain
I653_RS11550	SM00861	Transketolase, pyrimidine binding domain
I653_RS11585	SM00878	Biotin carboxylase C-terminal domain
I653_RS11630	SM00382	ATPases associated with a variety of cellular activities
I653_RS11640	SM00841	Elongation factor P, C-terminal
I653_RS11640	SM01185	I653_RS11640
I653_RS11675	SM00529	Helix-turn-helix diphteria tox regulatory element
I653_RS11685	SM00450	Rhodanese Homology Domain
I653_RS11705	SM00487	DEAD-like helicases superfamily
I653_RS11705	SM00490	helicase superfamily c-terminal domain
I653_RS11720	SM00530	Helix-turn-helix XRE-family like proteins 
I653_RS11780	SM00382	ATPases associated with a variety of cellular activities
I653_RS11790	SM01091	Transporter associated domain
I653_RS11815	SM00849	Metallo-beta-lactamase superfamily
I653_RS11835	SM00631	I653_RS11835
I653_RS11855	SM00028	Tetratricopeptide repeats
I653_RS11885	SM00382	ATPases associated with a variety of cellular activities
I653_RS11890	SM00382	ATPases associated with a variety of cellular activities
I653_RS11935	SM00257	Lysin motif
I653_RS11970	SM00518	AP endonuclease family 2
I653_RS11975	SM00487	DEAD-like helicases superfamily
I653_RS11975	SM00490	helicase superfamily c-terminal domain
I653_RS12010	SM00400	zinc finger
I653_RS12010	SM00493	I653_RS12010
I653_RS12025	SM00116	Domain in cystathionine beta-synthase and other proteins.
I653_RS12065	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
I653_RS12115	SM00729	Elongator protein 3, MiaB family, Radical SAM
I653_RS12130	SM00271	DnaJ molecular chaperone homology domain
I653_RS12150	SM00729	Elongator protein 3, MiaB family, Radical SAM
I653_RS12155	SM00838	Elongation factor G C-terminus
I653_RS12190	SM00849	Metallo-beta-lactamase superfamily
I653_RS12200	SM00278	Helix-hairpin-helix DNA-binding motif class 1
I653_RS12220	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
I653_RS12230	SM01103	I653_RS12230
I653_RS12260	SM00644	I653_RS12260
I653_RS12270	SM01350	I653_RS12270
I653_RS12295	SM00388	His Kinase A (phosphoacceptor) domain
I653_RS12300	SM00448	cheY-homologous receiver domain
I653_RS12300	SM00862	Transcriptional regulatory protein, C terminal
I653_RS12320	SM00822	I653_RS12320
I653_RS12330	SM00860	SMI1 / KNR4 family
I653_RS12390	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS12395	SM00450	Rhodanese Homology Domain
I653_RS12405	SM00028	Tetratricopeptide repeats
I653_RS12435	SM00422	helix_turn_helix, mercury resistance
I653_RS12450	SM01091	Transporter associated domain
I653_RS12505	SM00344	helix_turn_helix ASNC type
I653_RS12590	SM00287	Bacterial SH3 domain homologues
I653_RS12630	SM00422	helix_turn_helix, mercury resistance
I653_RS12640	SM00829	Enoylreductase
I653_RS12650	SM00640	Glycosyl hydrolases family 32
I653_RS12675	SM00382	ATPases associated with a variety of cellular activities
I653_RS12745	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
I653_RS12745	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
I653_RS12775	SM00650	Ribosomal RNA adenine dimethylases
I653_RS12830	SM00732	Likely ribonuclease with RNase H fold.
I653_RS12840	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
I653_RS12850	SM00382	ATPases associated with a variety of cellular activities
I653_RS12855	SM00062	Bacterial periplasmic substrate-binding proteins
I653_RS12855	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
I653_RS12880	SM00382	ATPases associated with a variety of cellular activities
I653_RS12885	SM00028	Tetratricopeptide repeats
I653_RS12905	SM00382	ATPases associated with a variety of cellular activities
I653_RS12925	SM00287	Bacterial SH3 domain homologues
I653_RS12925	SM00646	I653_RS12925
I653_RS12935	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
I653_RS12935	SM00954	Region found in RelA / SpoT proteins
I653_RS12985	SM01323	I653_RS12985
I653_RS13005	SM00382	ATPases associated with a variety of cellular activities
I653_RS13010	SM00278	Helix-hairpin-helix DNA-binding motif class 1
I653_RS13060	SM00257	Lysin motif
I653_RS13105	SM01317	I653_RS13105
I653_RS13200	SM00257	Lysin motif
I653_RS13210	SM01004	Delta-aminolevulinic acid dehydratase
I653_RS13245	SM00382	ATPases associated with a variety of cellular activities
I653_RS13245	SM00464	Found in ATP-dependent protease La (LON)
I653_RS13250	SM00382	ATPases associated with a variety of cellular activities
I653_RS13255	SM00382	ATPases associated with a variety of cellular activities
I653_RS13255	SM00994	ClpX C4-type zinc finger
I653_RS13255	SM01086	C-terminal, D2-small domain, of ClpB protein
I653_RS13280	SM01329	I653_RS13280
I653_RS13285	SM00917	LeuA allosteric (dimerisation) domain
I653_RS13340	SM00909	Sporulation and spore germination
I653_RS13350	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS13355	SM00421	helix_turn_helix, Lux Regulon
I653_RS13390	SM00465	GIY-YIG type nucleases (URI domain)
I653_RS13400	SM00813	Alpha-L-arabinofuranosidase C-terminus
I653_RS13405	SM00893	Electron transfer flavoprotein domain
I653_RS13410	SM00893	Electron transfer flavoprotein domain
I653_RS13435	SM00463	Small MutS-related domain
I653_RS13435	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
I653_RS13435	SM00534	ATPase domain of DNA mismatch repair MUTS family
I653_RS13440	SM00278	Helix-hairpin-helix DNA-binding motif class 1
I653_RS13440	SM00481	DNA polymerase alpha chain like domain
I653_RS13440	SM00483	DNA polymerase X family
I653_RS13460	SM00873	B3/4 domain
I653_RS13460	SM00874	tRNA synthetase B5 domain
I653_RS13460	SM00896	Ferredoxin-fold anticodon binding domain
I653_RS13475	SM00967	RNA 2'-O ribose methyltransferase substrate binding
I653_RS13510	SM00813	Alpha-L-arabinofuranosidase C-terminus
I653_RS13540	SM01007	Class II Aldolase and Adducin N-terminal domain
I653_RS13605	SM00448	cheY-homologous receiver domain
I653_RS13605	SM00850	LytTr DNA-binding domain
I653_RS13610	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
I653_RS13610	SM00387	Histidine kinase-like ATPases
I653_RS13620	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
I653_RS13635	SM00382	ATPases associated with a variety of cellular activities
I653_RS13655	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
I653_RS13685	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
I653_RS13685	SM01232	I653_RS13685
I653_RS13690	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
I653_RS13690	SM00474	3'-5' exonuclease
I653_RS13690	SM00475	5'-3' exonuclease
I653_RS13690	SM00482	DNA polymerase A domain
I653_RS13695	SM00091	PAS domain
I653_RS13695	SM00387	Histidine kinase-like ATPases
I653_RS13695	SM00388	His Kinase A (phosphoacceptor) domain
I653_RS13700	SM00448	cheY-homologous receiver domain
I653_RS13700	SM00862	Transcriptional regulatory protein, C terminal
I653_RS13710	SM01329	I653_RS13710
I653_RS13755	SM00919	Malic enzyme, NAD binding domain
I653_RS13755	SM01274	I653_RS13755
I653_RS13760	SM00481	DNA polymerase alpha chain like domain
I653_RS13790	SM00116	Domain in cystathionine beta-synthase and other proteins.
I653_RS13805	SM00904	Riboflavin kinase
I653_RS13825	SM00382	ATPases associated with a variety of cellular activities
I653_RS13840	SM00062	Bacterial periplasmic substrate-binding proteins
I653_RS13845	SM00062	Bacterial periplasmic substrate-binding proteins
I653_RS13860	SM00849	Metallo-beta-lactamase superfamily
I653_RS13880	SM00852	Probable molybdopterin binding domain
I653_RS13940	SM00981	I653_RS13940
I653_RS13970	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
I653_RS13975	SM00267	diguanylate cyclase
I653_RS13980	SM00363	S4 RNA-binding domain
I653_RS13980	SM01390	I653_RS13980
I653_RS13985	SM00363	S4 RNA-binding domain
I653_RS14000	SM00116	Domain in cystathionine beta-synthase and other proteins.
I653_RS14020	SM00354	helix_turn _helix lactose operon repressor
I653_RS14025	SM00830	Chorismate mutase type II
I653_RS14050	SM00382	ATPases associated with a variety of cellular activities
I653_RS14050	SM00843	I653_RS14050
I653_RS14085	SM00919	Malic enzyme, NAD binding domain
I653_RS14085	SM01274	I653_RS14085
I653_RS14090	SM00849	Metallo-beta-lactamase superfamily
I653_RS14110	SM00642	Alpha-amylase domain
I653_RS14115	SM00046	Diacylglycerol kinase catalytic domain (presumed)
I653_RS14150	SM00382	ATPases associated with a variety of cellular activities
I653_RS14155	SM00420	helix_turn_helix, Deoxyribose operon repressor
I653_RS14160	SM00363	S4 RNA-binding domain
I653_RS14210	SM00342	helix_turn_helix, arabinose operon control protein
I653_RS14235	SM00729	Elongator protein 3, MiaB family, Radical SAM
I653_RS14235	SM00876	Biotin and Thiamin Synthesis associated domain
I653_RS14265	SM00354	helix_turn _helix lactose operon repressor
I653_RS14290	SM00450	Rhodanese Homology Domain
I653_RS14305	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
I653_RS14305	SM00091	PAS domain
I653_RS14325	SM00382	ATPases associated with a variety of cellular activities
I653_RS14330	SM00387	Histidine kinase-like ATPases
I653_RS14335	SM00448	cheY-homologous receiver domain
I653_RS14335	SM00862	Transcriptional regulatory protein, C terminal
I653_RS14345	SM00382	ATPases associated with a variety of cellular activities
I653_RS14360	SM00382	ATPases associated with a variety of cellular activities
I653_RS14365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS14375	SM00729	Elongator protein 3, MiaB family, Radical SAM
I653_RS14435	SM00382	ATPases associated with a variety of cellular activities
I653_RS14475	SM01234	I653_RS14475
I653_RS14480	SM00947	Carbonic anhydrase
I653_RS14510	SM00382	ATPases associated with a variety of cellular activities
I653_RS14520	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
I653_RS14560	SM00984	UDP binding domain
I653_RS14620	SM00642	Alpha-amylase domain
I653_RS14770	SM00244	prohibitin homologues
I653_RS14825	SM00047	Lysozyme subfamily 2
I653_RS14875	SM00420	helix_turn_helix, Deoxyribose operon repressor
I653_RS14875	SM01134	I653_RS14875
I653_RS14880	SM01007	Class II Aldolase and Adducin N-terminal domain
I653_RS14890	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
I653_RS14890	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
I653_RS14890	SM00319	Homologues of the ligand binding domain of Tar
I653_RS14895	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
I653_RS14895	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
I653_RS14895	SM00319	Homologues of the ligand binding domain of Tar
I653_RS14900	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
I653_RS14900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
I653_RS14900	SM00319	Homologues of the ligand binding domain of Tar
I653_RS14905	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
I653_RS14905	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
I653_RS14905	SM00319	Homologues of the ligand binding domain of Tar
I653_RS14925	SM00642	Alpha-amylase domain
I653_RS14930	SM00116	Domain in cystathionine beta-synthase and other proteins.
I653_RS14930	SM01091	Transporter associated domain
I653_RS14985	SM00316	Ribosomal protein S1-like RNA-binding domain
I653_RS14995	SM00344	helix_turn_helix ASNC type
I653_RS15015	SM00387	Histidine kinase-like ATPases
I653_RS15015	SM00388	His Kinase A (phosphoacceptor) domain
I653_RS15020	SM01298	I653_RS15020
I653_RS15025	SM00479	I653_RS15025
I653_RS15055	SM00091	PAS domain
I653_RS15055	SM00387	Histidine kinase-like ATPases
I653_RS15060	SM00448	cheY-homologous receiver domain
I653_RS15070	SM00382	ATPases associated with a variety of cellular activities
I653_RS15135	SM00421	helix_turn_helix, Lux Regulon
I653_RS15135	SM00448	cheY-homologous receiver domain
I653_RS15140	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
I653_RS15140	SM00387	Histidine kinase-like ATPases
I653_RS15165	SM00052	Putative diguanylate phosphodiesterase
I653_RS15210	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
I653_RS15255	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
I653_RS15255	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
I653_RS15265	SM00923	MbtH-like protein
I653_RS15270	SM00823	Phosphopantetheine attachment site
I653_RS15270	SM00824	Thioesterase
I653_RS15345	SM01240	I653_RS15345
I653_RS15445	SM00729	Elongator protein 3, MiaB family, Radical SAM
I653_RS15525	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
I653_RS15560	SM00382	ATPases associated with a variety of cellular activities
I653_RS15565	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS15565	SM00866	I653_RS15565
I653_RS15595	SM00465	GIY-YIG type nucleases (URI domain)
I653_RS15620	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
I653_RS15645	SM00382	ATPases associated with a variety of cellular activities
I653_RS15665	SM00382	ATPases associated with a variety of cellular activities
I653_RS15665	SM00930	I653_RS15665
I653_RS15680	SM00493	I653_RS15680
I653_RS15730	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS15760	SM00382	ATPases associated with a variety of cellular activities
I653_RS15785	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
I653_RS15790	SM00448	cheY-homologous receiver domain
I653_RS15790	SM00862	Transcriptional regulatory protein, C terminal
I653_RS15795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
I653_RS15795	SM00387	Histidine kinase-like ATPases
I653_RS15795	SM00388	His Kinase A (phosphoacceptor) domain
I653_RS15830	SM00421	helix_turn_helix, Lux Regulon
I653_RS15830	SM00448	cheY-homologous receiver domain
I653_RS15835	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
I653_RS15835	SM00387	Histidine kinase-like ATPases
I653_RS15870	SM00382	ATPases associated with a variety of cellular activities
I653_RS15895	SM00387	Histidine kinase-like ATPases
I653_RS15895	SM00388	His Kinase A (phosphoacceptor) domain
I653_RS15900	SM00448	cheY-homologous receiver domain
I653_RS15900	SM00862	Transcriptional regulatory protein, C terminal
I653_RS15915	SM00835	Cupin
I653_RS15930	SM00382	ATPases associated with a variety of cellular activities
I653_RS15940	SM00382	ATPases associated with a variety of cellular activities
I653_RS16105	SM00316	Ribosomal protein S1-like RNA-binding domain
I653_RS16105	SM00357	Cold shock protein domain
I653_RS16105	SM00955	I653_RS16105
I653_RS16125	SM00530	Helix-turn-helix XRE-family like proteins 
I653_RS16130	SM00530	Helix-turn-helix XRE-family like proteins 
I653_RS16135	SM00530	Helix-turn-helix XRE-family like proteins 
I653_RS16180	SM00116	Domain in cystathionine beta-synthase and other proteins.
I653_RS16180	SM00382	ATPases associated with a variety of cellular activities
I653_RS16205	SM00116	Domain in cystathionine beta-synthase and other proteins.
I653_RS16205	SM00382	ATPases associated with a variety of cellular activities
I653_RS16280	SM00984	UDP binding domain
I653_RS16290	SM01192	I653_RS16290
I653_RS16290	SM01193	I653_RS16290
I653_RS16310	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
I653_RS16325	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS16350	SM00636	I653_RS16350
I653_RS16370	SM00421	helix_turn_helix, Lux Regulon
I653_RS16370	SM00448	cheY-homologous receiver domain
I653_RS16385	SM00382	ATPases associated with a variety of cellular activities
I653_RS16395	SM00331	Sigma factor PP2C-like phosphatases
I653_RS16425	SM00354	helix_turn _helix lactose operon repressor
I653_RS16430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS16430	SM00895	I653_RS16430
I653_RS16525	SM00530	Helix-turn-helix XRE-family like proteins 
I653_RS16570	SM00640	Glycosyl hydrolases family 32
I653_RS16605	SM00752	Horizontally Transferred TransMembrane Domain
I653_RS16645	SM00642	Alpha-amylase domain
I653_RS16675	SM00642	Alpha-amylase domain
I653_RS16680	SM00354	helix_turn _helix lactose operon repressor
I653_RS16700	SM00947	Carbonic anhydrase
I653_RS16715	SM00382	ATPases associated with a variety of cellular activities
I653_RS16720	SM00387	Histidine kinase-like ATPases
I653_RS16725	SM00448	cheY-homologous receiver domain
I653_RS16725	SM00862	Transcriptional regulatory protein, C terminal
I653_RS16775	SM00028	Tetratricopeptide repeats
I653_RS16780	SM00382	ATPases associated with a variety of cellular activities
I653_RS16885	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS16885	SM00866	I653_RS16885
I653_RS16925	SM00382	ATPases associated with a variety of cellular activities
I653_RS16930	SM00487	DEAD-like helicases superfamily
I653_RS16930	SM00490	helicase superfamily c-terminal domain
I653_RS16955	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
I653_RS16965	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
I653_RS16965	SM00245	tail specific protease
I653_RS16975	SM00382	ATPases associated with a variety of cellular activities
I653_RS16990	SM00937	I653_RS16990
I653_RS16995	SM00957	SecA DEAD-like domain
I653_RS16995	SM00958	SecA preprotein cross-linking domain
I653_RS17085	SM00487	DEAD-like helicases superfamily
I653_RS17085	SM00490	helicase superfamily c-terminal domain
I653_RS17095	SM00421	helix_turn_helix, Lux Regulon
I653_RS17095	SM00448	cheY-homologous receiver domain
I653_RS17100	SM00387	Histidine kinase-like ATPases
I653_RS17140	SM00984	UDP binding domain
I653_RS17165	SM00646	I653_RS17165
I653_RS17210	SM00382	ATPases associated with a variety of cellular activities
I653_RS17280	SM00047	Lysozyme subfamily 2
I653_RS17280	SM00287	Bacterial SH3 domain homologues
I653_RS17325	SM00854	Bacterial capsule synthesis protein PGA_cap
I653_RS17340	SM00354	helix_turn _helix lactose operon repressor
I653_RS17355	SM00382	ATPases associated with a variety of cellular activities
I653_RS17370	SM00287	Bacterial SH3 domain homologues
I653_RS17425	SM00903	Flavin reductase like domain
I653_RS17440	SM00344	helix_turn_helix ASNC type
I653_RS17485	SM00984	UDP binding domain
I653_RS17510	SM00487	DEAD-like helicases superfamily
I653_RS17510	SM00490	helicase superfamily c-terminal domain
I653_RS17520	SM00420	helix_turn_helix, Deoxyribose operon repressor
I653_RS17520	SM01134	I653_RS17520
I653_RS17550	SM00448	cheY-homologous receiver domain
I653_RS17550	SM00862	Transcriptional regulatory protein, C terminal
I653_RS17555	SM00387	Histidine kinase-like ATPases
I653_RS17555	SM00388	His Kinase A (phosphoacceptor) domain
I653_RS17555	SM00448	cheY-homologous receiver domain
I653_RS17570	SM00028	Tetratricopeptide repeats
I653_RS17595	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS17605	SM00710	Parallel beta-helix repeats
I653_RS17605	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
I653_RS17635	SM00938	Nitrogen regulatory protein P-II
I653_RS17640	SM00014	Acid phosphatase homologues
I653_RS17675	SM00155	Phospholipase D. Active site motifs.
I653_RS17680	SM00422	helix_turn_helix, mercury resistance
I653_RS17730	SM00028	Tetratricopeptide repeats
I653_RS17735	SM00729	Elongator protein 3, MiaB family, Radical SAM
I653_RS17745	SM00327	von Willebrand factor (vWF) type A domain
I653_RS17755	SM00327	von Willebrand factor (vWF) type A domain
I653_RS17790	SM00382	ATPases associated with a variety of cellular activities
I653_RS17850	SM00226	Low molecular weight phosphatase family
I653_RS17890	SM00937	I653_RS17890
I653_RS17910	SM00919	Malic enzyme, NAD binding domain
I653_RS17910	SM01274	I653_RS17910
I653_RS17925	SM00357	Cold shock protein domain
I653_RS17925	SM00382	ATPases associated with a variety of cellular activities
I653_RS17925	SM00959	Rho termination factor, N-terminal domain
I653_RS17955	SM00448	cheY-homologous receiver domain
I653_RS17985	SM00155	Phospholipase D. Active site motifs.
I653_RS18005	SM00382	ATPases associated with a variety of cellular activities
I653_RS18010	SM00155	Phospholipase D. Active site motifs.
I653_RS18030	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
I653_RS18045	SM00100	Cyclic nucleotide-monophosphate binding domain
I653_RS18045	SM00419	helix_turn_helix, cAMP Regulatory protein
I653_RS18055	SM00836	DALR anticodon binding domain
I653_RS18055	SM01016	Arginyl tRNA synthetase N terminal dom
I653_RS18070	SM00729	Elongator protein 3, MiaB family, Radical SAM
I653_RS18120	SM00028	Tetratricopeptide repeats
I653_RS18150	SM00382	ATPases associated with a variety of cellular activities
I653_RS18190	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS18195	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
I653_RS18215	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
I653_RS18310	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
I653_RS18350	SM00858	I653_RS18350
I653_RS18400	SM00986	Uracil DNA glycosylase superfamily
I653_RS18400	SM00987	UreE urease accessory protein, C-terminal domain 
I653_RS18420	SM00640	Glycosyl hydrolases family 32
I653_RS18440	SM01061	CAT RNA binding domain
I653_RS18590	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
I653_RS18625	SM01061	CAT RNA binding domain
I653_RS18640	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS18645	SM00363	S4 RNA-binding domain
I653_RS18655	SM00954	Region found in RelA / SpoT proteins
I653_RS18730	SM01060	I653_RS18730
I653_RS18745	SM00382	ATPases associated with a variety of cellular activities
I653_RS18780	SM00382	ATPases associated with a variety of cellular activities
I653_RS18785	SM00382	ATPases associated with a variety of cellular activities
I653_RS18820	SM00382	ATPases associated with a variety of cellular activities
I653_RS18870	SM00421	helix_turn_helix, Lux Regulon
I653_RS18870	SM00448	cheY-homologous receiver domain
I653_RS18900	SM00822	I653_RS18900
I653_RS18905	SM00882	Coenzyme A transferase
I653_RS18910	SM00882	Coenzyme A transferase
I653_RS18940	SM01060	I653_RS18940
I653_RS18955	SM01061	CAT RNA binding domain
I653_RS18970	SM00487	DEAD-like helicases superfamily
I653_RS18970	SM00490	helicase superfamily c-terminal domain
I653_RS19075	SM00487	DEAD-like helicases superfamily
I653_RS19075	SM00490	helicase superfamily c-terminal domain
I653_RS19125	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
I653_RS19135	SM01133	I653_RS19135
I653_RS19165	SM00382	ATPases associated with a variety of cellular activities
I653_RS19175	SM00062	Bacterial periplasmic substrate-binding proteins
I653_RS19240	SM00382	ATPases associated with a variety of cellular activities
I653_RS19245	SM00387	Histidine kinase-like ATPases
I653_RS19250	SM00448	cheY-homologous receiver domain
I653_RS19250	SM00862	Transcriptional regulatory protein, C terminal
I653_RS19305	SM00420	helix_turn_helix, Deoxyribose operon repressor
I653_RS19305	SM01134	I653_RS19305
I653_RS19330	SM00387	Histidine kinase-like ATPases
I653_RS19360	SM00564	beta-propeller repeat
I653_RS19395	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS19420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS19420	SM00895	I653_RS19420
I653_RS19435	SM01350	I653_RS19435
I653_RS19465	SM00345	helix_turn_helix gluconate operon transcriptional repressor
I653_RS19465	SM00866	I653_RS19465
I653_RS19480	SM00382	ATPases associated with a variety of cellular activities
I653_RS19490	SM00487	DEAD-like helicases superfamily
I653_RS19580	SM00091	PAS domain
I653_RS19580	SM00382	ATPases associated with a variety of cellular activities
I653_RS19590	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
I653_RS19595	SM00849	Metallo-beta-lactamase superfamily
I653_RS19610	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
I653_RS19610	SM00091	PAS domain
I653_RS19610	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
I653_RS19610	SM00387	Histidine kinase-like ATPases
I653_RS19610	SM00388	His Kinase A (phosphoacceptor) domain
I653_RS19615	SM00448	cheY-homologous receiver domain
I653_RS19615	SM00862	Transcriptional regulatory protein, C terminal
I653_RS19640	SM00788	Adenylosuccinate synthetase
I653_RS19650	SM00382	ATPases associated with a variety of cellular activities
I653_RS19680	SM00267	diguanylate cyclase
I653_RS19705	SM01131	I653_RS19705
I653_RS19725	SM00422	helix_turn_helix, mercury resistance
I653_RS19780	SM00849	Metallo-beta-lactamase superfamily
I653_RS19785	SM00347	helix_turn_helix multiple antibiotic resistance protein
I653_RS19820	SM00226	Low molecular weight phosphatase family
I653_RS19835	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
I653_RS19840	SM00530	Helix-turn-helix XRE-family like proteins 
I653_RS19845	SM00825	Beta-ketoacyl synthase
I653_RS19865	SM01266	I653_RS19865
I653_RS19875	SM00354	helix_turn _helix lactose operon repressor
I653_RS19905	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
I653_RS19925	SM00470	ParB-like nuclease domain
I653_RS19940	SM00470	ParB-like nuclease domain
I653_RS19950	SM01228	I653_RS19950
I653_RS19960	SM00322	K homology RNA-binding domain
I653_RS19960	SM00393	Putative single-stranded nucleic acids-binding domain
I653_RS19960	SM01245	I653_RS19960
