locus-tag class description HCN55_RS00005 PF11638 DnaA N-terminal domain HCN55_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix HCN55_RS00005 PF00308 Bacterial dnaA protein HCN55_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HCN55_RS00010 PF02767 DNA polymerase III beta subunit, central domain HCN55_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HCN55_RS00020 PF02463 RecF/RecN/SMC N terminal domain HCN55_RS00025 PF04025 Domain of unknown function (DUF370) HCN55_RS00030 PF01751 Toprim domain HCN55_RS00030 PF00204 DNA gyrase B HCN55_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus HCN55_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A HCN55_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller HCN55_RS00065 PF14175 YaaC-like Protein HCN55_RS00070 PF00478 IMP dehydrogenase / GMP reductase domain HCN55_RS00070 PF00571 CBS domain HCN55_RS00075 PF00768 D-alanyl-D-alanine carboxypeptidase HCN55_RS00075 PF07943 Penicillin-binding protein 5, C-terminal domain HCN55_RS00080 PF01680 SOR/SNZ family HCN55_RS00085 PF01174 SNO glutamine amidotransferase family HCN55_RS00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HCN55_RS00090 PF02403 Seryl-tRNA synthetase N-terminal domain HCN55_RS00105 PF10704 Protein of unknown function (DUF2508) HCN55_RS00110 PF07441 SigmaK-factor processing regulatory protein BofA HCN55_RS00140 PF10764 Inhibitor of sigma-G Gin HCN55_RS00145 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein HCN55_RS00150 PF05816 Toxic anion resistance protein (TelA) HCN55_RS00155 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HCN55_RS00155 PF01276 Orn/Lys/Arg decarboxylase, major domain HCN55_RS00160 PF02223 Thymidylate kinase HCN55_RS00165 PF06153 Cyclic-di-AMP receptor HCN55_RS00170 PF03885 Protein of unknown function (DUF327) HCN55_RS00175 PF09115 DNA polymerase III, delta subunit, C terminal HCN55_RS00180 PF04468 PSP1 C-terminal conserved region HCN55_RS00185 PF06156 Initiation control protein YabA HCN55_RS00190 PF05175 Methyltransferase small domain HCN55_RS00195 PF01541 GIY-YIG catalytic domain HCN55_RS00200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCN55_RS00205 PF18277 AbrB C-terminal domain HCN55_RS00205 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HCN55_RS00210 PF01588 Putative tRNA binding domain HCN55_RS00210 PF09334 tRNA synthetases class I (M) HCN55_RS00210 PF08264 Anticodon-binding domain of tRNA HCN55_RS00215 PF01026 TatD related DNase HCN55_RS00220 PF07501 G5 domain HCN55_RS00220 PF03990 G5-linked-Ubiquitin-like domain HCN55_RS00220 PF06725 3D domain HCN55_RS00225 PF13662 Toprim domain HCN55_RS00225 PF13331 Domain of unknown function (DUF4093) HCN55_RS00230 PF00398 Ribosomal RNA adenine dimethylase HCN55_RS00235 PF05582 YabG peptidase U57 HCN55_RS00240 PF06257 Biofilm formation stimulator VEG HCN55_RS00245 PF00269 Small, acid-soluble spore proteins, alpha/beta type HCN55_RS00250 PF08544 GHMP kinases C terminal HCN55_RS00250 PF00288 GHMP kinases N terminal domain HCN55_RS00255 PF09182 Bacterial purine repressor, N-terminal HCN55_RS00255 PF00156 Phosphoribosyl transferase domain HCN55_RS00260 PF01042 Endoribonuclease L-PSP HCN55_RS00265 PF04026 SpoVG HCN55_RS00270 PF00483 Nucleotidyl transferase HCN55_RS00270 PF00132 Bacterial transferase hexapeptide (six repeats) HCN55_RS00275 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HCN55_RS00275 PF14572 Phosphoribosyl synthetase-associated domain HCN55_RS00280 PF01386 Ribosomal L25p family HCN55_RS00280 PF14693 Ribosomal protein TL5, C-terminal domain HCN55_RS00285 PF01195 Peptidyl-tRNA hydrolase HCN55_RS00290 PF10955 Protein of unknown function (DUF2757) HCN55_RS00295 PF03461 TRCF domain HCN55_RS00295 PF02559 CarD-like/TRCF domain HCN55_RS00295 PF17757 UvrB interaction domain HCN55_RS00295 PF00270 DEAD/DEAH box helicase HCN55_RS00295 PF00271 Helicase conserved C-terminal domain HCN55_RS00300 PF15714 Stage V sporulation protein T C-terminal, transcription factor HCN55_RS00300 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HCN55_RS00305 PF01943 Polysaccharide biosynthesis protein HCN55_RS00305 PF14667 Polysaccharide biosynthesis C-terminal domain HCN55_RS00310 PF03819 MazG nucleotide pyrophosphohydrolase domain HCN55_RS00310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCN55_RS00315 PF01479 S4 domain HCN55_RS00320 PF07873 YabP family HCN55_RS00325 PF09578 Spore cortex protein YabQ (Spore_YabQ) HCN55_RS00330 PF04977 Septum formation initiator HCN55_RS00335 PF00575 S1 RNA binding domain HCN55_RS00350 PF07228 Stage II sporulation protein E (SpoIIE) HCN55_RS00355 PF00092 von Willebrand factor type A domain HCN55_RS00360 PF00069 Protein kinase domain HCN55_RS00365 PF09179 TilS substrate binding domain HCN55_RS00365 PF11734 TilS substrate C-terminal domain HCN55_RS00365 PF01171 PP-loop family HCN55_RS00375 PF01434 Peptidase family M41 HCN55_RS00375 PF06480 FtsH Extracellular HCN55_RS00375 PF00004 ATPase family associated with various cellular activities (AAA) HCN55_RS00375 PF17862 AAA+ lid domain HCN55_RS00380 PF03309 Type III pantothenate kinase HCN55_RS00385 PF01430 Hsp33 protein HCN55_RS00390 PF13145 PPIC-type PPIASE domain HCN55_RS00395 PF00291 Pyridoxal-phosphate dependent enzyme HCN55_RS00400 PF00425 chorismate binding enzyme HCN55_RS00400 PF04715 Anthranilate synthase component I, N terminal region HCN55_RS00405 PF00117 Glutamine amidotransferase class-I HCN55_RS00410 PF01063 Amino-transferase class IV HCN55_RS00415 PF00809 Pterin binding enzyme HCN55_RS00420 PF02152 Dihydroneopterin aldolase HCN55_RS00425 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HCN55_RS00430 PF01381 Helix-turn-helix HCN55_RS00435 PF01207 Dihydrouridine synthase (Dus) HCN55_RS00440 PF00152 tRNA synthetases class II (D, K and N) HCN55_RS00440 PF01336 OB-fold nucleic acid binding domain HCN55_RS00520 PF05848 CtsR N-terminal HTH domain HCN55_RS00520 PF17727 CtsR C-terminal dimerization domain HCN55_RS00525 PF02151 UvrB/uvrC motif HCN55_RS00530 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain HCN55_RS00535 PF00004 ATPase family associated with various cellular activities (AAA) HCN55_RS00535 PF07724 AAA domain (Cdc48 subfamily) HCN55_RS00535 PF17871 AAA lid domain HCN55_RS00535 PF02861 Clp amino terminal domain, pathogenicity island component HCN55_RS00535 PF10431 C-terminal, D2-small domain, of ClpB protein HCN55_RS00540 PF18073 Rubredoxin metal binding domain HCN55_RS00545 PF10635 DisA bacterial checkpoint controller linker region HCN55_RS00545 PF02457 DisA bacterial checkpoint controller nucleotide-binding HCN55_RS00555 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HCN55_RS00560 PF02542 YgbB family HCN55_RS00565 PF00749 tRNA synthetases class I (E and Q), catalytic domain HCN55_RS00570 PF00132 Bacterial transferase hexapeptide (six repeats) HCN55_RS00570 PF06426 Serine acetyltransferase, N-terminal HCN55_RS00575 PF09190 DALR domain HCN55_RS00575 PF01406 tRNA synthetases class I (C) catalytic domain HCN55_RS00580 PF00636 Ribonuclease III domain HCN55_RS00585 PF08032 RNA 2'-O ribose methyltransferase substrate binding HCN55_RS00585 PF00588 SpoU rRNA Methylase family HCN55_RS00590 PF05991 YacP-like NYN domain HCN55_RS00595 PF08281 Sigma-70, region 4 HCN55_RS00595 PF04542 Sigma-70 region 2 HCN55_RS00600 PF00471 Ribosomal protein L33 HCN55_RS00605 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HCN55_RS00610 PF02357 Transcription termination factor nusG HCN55_RS00610 PF00467 KOW motif HCN55_RS00615 PF03946 Ribosomal protein L11, N-terminal domain HCN55_RS00615 PF00298 Ribosomal protein L11, RNA binding domain HCN55_RS00620 PF00687 Ribosomal protein L1p/L10e family HCN55_RS00625 PF00466 Ribosomal protein L10 HCN55_RS00630 PF00542 Ribosomal protein L7/L12 C-terminal domain HCN55_RS00630 PF16320 Ribosomal protein L7/L12 dimerisation domain HCN55_RS00635 PF05175 Methyltransferase small domain HCN55_RS00640 PF00562 RNA polymerase Rpb2, domain 6 HCN55_RS00640 PF04560 RNA polymerase Rpb2, domain 7 HCN55_RS00640 PF10385 RNA polymerase beta subunit external 1 domain HCN55_RS00640 PF04565 RNA polymerase Rpb2, domain 3 HCN55_RS00640 PF04561 RNA polymerase Rpb2, domain 2 HCN55_RS00640 PF04563 RNA polymerase beta subunit HCN55_RS00645 PF05000 RNA polymerase Rpb1, domain 4 HCN55_RS00645 PF00623 RNA polymerase Rpb1, domain 2 HCN55_RS00645 PF04998 RNA polymerase Rpb1, domain 5 HCN55_RS00645 PF04997 RNA polymerase Rpb1, domain 1 HCN55_RS00645 PF04983 RNA polymerase Rpb1, domain 3 HCN55_RS00650 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family HCN55_RS00655 PF00164 Ribosomal protein S12/S23 HCN55_RS00660 PF00177 Ribosomal protein S7p/S5e HCN55_RS00665 PF14492 Elongation Factor G, domain II HCN55_RS00665 PF03764 Elongation factor G, domain IV HCN55_RS00665 PF00009 Elongation factor Tu GTP binding domain HCN55_RS00665 PF00679 Elongation factor G C-terminus HCN55_RS00665 PF03144 Elongation factor Tu domain 2 HCN55_RS00670 PF03143 Elongation factor Tu C-terminal domain HCN55_RS00670 PF00009 Elongation factor Tu GTP binding domain HCN55_RS00670 PF03144 Elongation factor Tu domain 2 HCN55_RS00675 PF12146 Serine aminopeptidase, S33 HCN55_RS00680 PF00338 Ribosomal protein S10p/S20e HCN55_RS00685 PF00297 Ribosomal protein L3 HCN55_RS00690 PF00573 Ribosomal protein L4/L1 family HCN55_RS00695 PF00276 Ribosomal protein L23 HCN55_RS00700 PF03947 Ribosomal Proteins L2, C-terminal domain HCN55_RS00700 PF00181 Ribosomal Proteins L2, RNA binding domain HCN55_RS00705 PF00203 Ribosomal protein S19 HCN55_RS00710 PF00237 Ribosomal protein L22p/L17e HCN55_RS00715 PF07650 KH domain HCN55_RS00715 PF00189 Ribosomal protein S3, C-terminal domain HCN55_RS00720 PF00252 Ribosomal protein L16p/L10e HCN55_RS00725 PF00831 Ribosomal L29 protein HCN55_RS00730 PF00366 Ribosomal protein S17 HCN55_RS00735 PF00238 Ribosomal protein L14p/L23e HCN55_RS00740 PF00467 KOW motif HCN55_RS00740 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HCN55_RS00745 PF00281 Ribosomal protein L5 HCN55_RS00745 PF00673 ribosomal L5P family C-terminus HCN55_RS00750 PF00253 Ribosomal protein S14p/S29e HCN55_RS00755 PF00410 Ribosomal protein S8 HCN55_RS00760 PF00347 Ribosomal protein L6 HCN55_RS00765 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HCN55_RS00770 PF00333 Ribosomal protein S5, N-terminal domain HCN55_RS00770 PF03719 Ribosomal protein S5, C-terminal domain HCN55_RS00775 PF00327 Ribosomal protein L30p/L7e HCN55_RS00780 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HCN55_RS00785 PF00344 SecY translocase HCN55_RS00790 PF05191 Adenylate kinase, active site lid HCN55_RS00795 PF00557 Metallopeptidase family M24 HCN55_RS00805 PF01176 Translation initiation factor 1A / IF-1 HCN55_RS00810 PF00444 Ribosomal protein L36 HCN55_RS00815 PF00416 Ribosomal protein S13/S18 HCN55_RS00820 PF00411 Ribosomal protein S11 HCN55_RS00825 PF01000 RNA polymerase Rpb3/RpoA insert domain HCN55_RS00825 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HCN55_RS00825 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HCN55_RS00830 PF01196 Ribosomal protein L17 HCN55_RS00835 PF00005 ABC transporter HCN55_RS00840 PF00005 ABC transporter HCN55_RS00845 PF02361 Cobalt transport protein HCN55_RS00850 PF01416 tRNA pseudouridine synthase HCN55_RS00855 PF00572 Ribosomal protein L13 HCN55_RS00860 PF00380 Ribosomal protein S9/S16 HCN55_RS00865 PF08241 Methyltransferase domain HCN55_RS00870 PF10730 Protein of unknown function (DUF2521) HCN55_RS00875 PF01520 N-acetylmuramoyl-L-alanine amidase HCN55_RS00880 PF10609 NUBPL iron-transfer P-loop NTPase HCN55_RS00885 PF17898 Spore germination GerD central core domain HCN55_RS00890 PF14089 KinB-signalling pathway activation in sporulation HCN55_RS00895 PF01522 Polysaccharide deacetylase HCN55_RS00975 PF00916 Sulfate permease family HCN55_RS00975 PF01740 STAS domain HCN55_RS00980 PF01758 Sodium Bile acid symporter family HCN55_RS00985 PF00756 Putative esterase HCN55_RS00990 PF01032 FecCD transport family HCN55_RS00995 PF01032 FecCD transport family HCN55_RS01000 PF01497 Periplasmic binding protein HCN55_RS01005 PF12833 Helix-turn-helix domain HCN55_RS01005 PF01497 Periplasmic binding protein HCN55_RS01010 PF07075 Protein of unknown function (DUF1343) HCN55_RS01015 PF01915 Glycosyl hydrolase family 3 C-terminal domain HCN55_RS01015 PF00933 Glycosyl hydrolase family 3 N terminal domain HCN55_RS01020 PF00144 Beta-lactamase HCN55_RS01025 PF02378 Phosphotransferase system, EIIC HCN55_RS01025 PF00367 phosphotransferase system, EIIB HCN55_RS01030 PF01380 SIS domain HCN55_RS01030 PF01418 Helix-turn-helix domain, rpiR family HCN55_RS01035 PF01380 SIS domain HCN55_RS01045 PF04463 Protein of unknown function (DUF523) HCN55_RS01075 PF04542 Sigma-70 region 2 HCN55_RS01075 PF08281 Sigma-70, region 4 HCN55_RS01080 PF13490 Putative zinc-finger HCN55_RS01085 PF02457 DisA bacterial checkpoint controller nucleotide-binding HCN55_RS01090 PF07949 YbbR-like protein HCN55_RS01095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HCN55_RS01095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HCN55_RS01095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HCN55_RS01095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HCN55_RS01100 PF01380 SIS domain HCN55_RS01110 PF00730 HhH-GPD superfamily base excision DNA repair protein HCN55_RS01110 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain HCN55_RS01115 PF02805 Metal binding domain of Ada HCN55_RS01115 PF12833 Helix-turn-helix domain HCN55_RS01120 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HCN55_RS01120 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HCN55_RS01125 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HCN55_RS01125 PF00361 Proton-conducting membrane transporter HCN55_RS01130 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) HCN55_RS01145 PF10057 Uncharacterized conserved protein (DUF2294) HCN55_RS01155 PF07690 Major Facilitator Superfamily HCN55_RS01170 PF04055 Radical SAM superfamily HCN55_RS01170 PF13186 Iron-sulfur cluster-binding domain HCN55_RS01175 PF02517 CPBP intramembrane metalloprotease HCN55_RS01180 PF00005 ABC transporter HCN55_RS01195 PF13905 Thioredoxin-like HCN55_RS01200 PF00561 alpha/beta hydrolase fold HCN55_RS01205 PF00072 Response regulator receiver domain HCN55_RS01205 PF00486 Transcriptional regulatory protein, C terminal HCN55_RS01210 PF00672 HAMP domain HCN55_RS01210 PF00512 His Kinase A (phospho-acceptor) domain HCN55_RS01220 PF00069 Protein kinase domain HCN55_RS01230 PF16226 Domain of unknown function (DUF4885) HCN55_RS01235 PF00324 Amino acid permease HCN55_RS01240 PF17334 Minor curli fiber component A HCN55_RS01245 PF17340 Family of unknown function (DUF5370) HCN55_RS01250 PF00905 Penicillin binding protein transpeptidase domain HCN55_RS01255 PF00067 Cytochrome P450 HCN55_RS01265 PF13520 Amino acid permease HCN55_RS01270 PF03009 Glycerophosphoryl diester phosphodiesterase family HCN55_RS01275 PF07690 Major Facilitator Superfamily HCN55_RS01280 PF10852 Protein of unknown function (DUF2651) HCN55_RS01285 PF00583 Acetyltransferase (GNAT) family HCN55_RS01285 PF01047 MarR family HCN55_RS01290 PF07690 Major Facilitator Superfamily HCN55_RS01300 PF01471 Putative peptidoglycan binding domain HCN55_RS01300 PF08924 Domain of unknown function (DUF1906) HCN55_RS01305 PF00892 EamA-like transporter family HCN55_RS01310 PF12833 Helix-turn-helix domain HCN55_RS01310 PF02311 AraC-like ligand binding domain HCN55_RS01315 PF02222 ATP-grasp domain HCN55_RS01320 PF00089 Trypsin HCN55_RS01325 PF10794 Protein of unknown function (DUF2606) HCN55_RS01330 PF12697 Alpha/beta hydrolase family HCN55_RS01335 PF01066 CDP-alcohol phosphatidyltransferase HCN55_RS01340 PF09335 SNARE associated Golgi protein HCN55_RS01345 PF02666 Phosphatidylserine decarboxylase HCN55_RS01355 PF05139 Erythromycin esterase HCN55_RS01360 PF12833 Helix-turn-helix domain HCN55_RS01370 PF00375 Sodium:dicarboxylate symporter family HCN55_RS01375 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HCN55_RS01375 PF02378 Phosphotransferase system, EIIC HCN55_RS01375 PF00367 phosphotransferase system, EIIB HCN55_RS01380 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HCN55_RS01385 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS01385 PF07702 UTRA domain HCN55_RS01390 PF07853 Protein of unknown function (DUF1648) HCN55_RS01395 PF01063 Amino-transferase class IV HCN55_RS01400 PF00324 Amino acid permease HCN55_RS01405 PF02574 Homocysteine S-methyltransferase HCN55_RS01415 PF01235 Sodium:alanine symporter family HCN55_RS01420 PF04960 Glutaminase HCN55_RS01425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS01430 PF00072 Response regulator receiver domain HCN55_RS01430 PF08664 YcbB domain HCN55_RS01435 PF00701 Dihydrodipicolinate synthetase family HCN55_RS01440 PF00171 Aldehyde dehydrogenase family HCN55_RS01445 PF07690 Major Facilitator Superfamily HCN55_RS01450 PF13378 Enolase C-terminal domain-like HCN55_RS01455 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS01455 PF07729 FCD domain HCN55_RS01460 PF08666 SAF domain HCN55_RS01460 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HCN55_RS01465 PF01636 Phosphotransferase enzyme family HCN55_RS01470 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein HCN55_RS01475 PF00892 EamA-like transporter family HCN55_RS01480 PF00486 Transcriptional regulatory protein, C terminal HCN55_RS01480 PF00072 Response regulator receiver domain HCN55_RS01485 PF00512 His Kinase A (phospho-acceptor) domain HCN55_RS01485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS01490 PF00005 ABC transporter HCN55_RS01505 PF10710 Protein of unknown function (DUF2512) HCN55_RS01510 PF07486 Cell Wall Hydrolase HCN55_RS01515 PF10138 vWA found in TerF C terminus HCN55_RS01525 PF16655 PhoD-like phosphatase, N-terminal domain HCN55_RS01525 PF09423 PhoD-like phosphatase HCN55_RS01530 PF02416 mttA/Hcf106 family HCN55_RS01535 PF00902 Sec-independent protein translocase protein (TatC) HCN55_RS01540 PF01470 Pyroglutamyl peptidase HCN55_RS01545 PF00266 Aminotransferase class-V HCN55_RS01550 PF07690 Major Facilitator Superfamily HCN55_RS01555 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS01560 PF00710 Asparaginase, N-terminal HCN55_RS01560 PF17763 Glutaminase/Asparaginase C-terminal domain HCN55_RS01565 PF01674 Lipase (class 2) HCN55_RS01570 PF06271 RDD family HCN55_RS01575 PF02810 SEC-C motif HCN55_RS01575 PF05225 helix-turn-helix, Psq domain HCN55_RS01580 PF14501 GHKL domain HCN55_RS01585 PF00072 Response regulator receiver domain HCN55_RS01585 PF04397 LytTr DNA-binding domain HCN55_RS01590 PF00005 ABC transporter HCN55_RS01595 PF12679 ABC-2 family transporter protein HCN55_RS01600 PF00248 Aldo/keto reductase family HCN55_RS01605 PF11611 Domain of unknown function (DUF4352) HCN55_RS01605 PF17118 Domain of unknown function (DUF5105) HCN55_RS01615 PF16244 Domain of unknown function (DUF4901) HCN55_RS01620 PF16244 Domain of unknown function (DUF4901) HCN55_RS01625 PF13539 D-alanyl-D-alanine carboxypeptidase HCN55_RS01630 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_RS01640 PF00128 Alpha amylase, catalytic domain HCN55_RS01645 PF01297 Zinc-uptake complex component A periplasmic HCN55_RS01650 PF00005 ABC transporter HCN55_RS01655 PF00950 ABC 3 transport family HCN55_RS01660 PF00296 Luciferase-like monooxygenase HCN55_RS01665 PF02342 TerD domain HCN55_RS01670 PF02342 TerD domain HCN55_RS01675 PF02342 TerD domain HCN55_RS01680 PF03741 Integral membrane protein TerC family HCN55_RS01685 PF14266 Putative component of 'biosynthetic module' HCN55_RS01690 PF05816 Toxic anion resistance protein (TelA) HCN55_RS01695 PF07690 Major Facilitator Superfamily HCN55_RS01700 PF07690 Major Facilitator Superfamily HCN55_RS01710 PF00571 CBS domain HCN55_RS01710 PF00005 ABC transporter HCN55_RS01715 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS01720 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HCN55_RS01730 PF03606 C4-dicarboxylate anaerobic carrier HCN55_RS01740 PF00128 Alpha amylase, catalytic domain HCN55_RS01740 PF16738 Starch-binding module 26 HCN55_RS01745 PF00056 lactate/malate dehydrogenase, NAD binding domain HCN55_RS01745 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HCN55_RS01750 PF02652 L-lactate permease HCN55_RS01755 PF07690 Major Facilitator Superfamily HCN55_RS01760 PF01047 MarR family HCN55_RS01765 PF01810 LysE type translocator HCN55_RS01770 PF08892 YqcI/YcgG family HCN55_RS01775 PF00324 Amino acid permease HCN55_RS01780 PF09347 Domain of unknown function (DUF1989) HCN55_RS01785 PF02540 NAD synthase HCN55_RS01795 PF01202 Shikimate kinase HCN55_RS01800 PF08241 Methyltransferase domain HCN55_RS01805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS01805 PF03466 LysR substrate binding domain HCN55_RS01810 PF05448 Acetyl xylan esterase (AXE1) HCN55_RS01815 PF10127 RNA repair pathway DNA polymerase beta family HCN55_RS01820 PF01619 Proline dehydrogenase HCN55_RS01825 PF00171 Aldehyde dehydrogenase family HCN55_RS01830 PF00474 Sodium:solute symporter family HCN55_RS01835 PF13556 PucR C-terminal helix-turn-helix domain HCN55_RS01835 PF17853 GGDEF-like domain HCN55_RS01840 PF09323 Domain of unknown function (DUF1980) HCN55_RS01845 PF03773 Predicted permease HCN55_RS01850 PF00561 alpha/beta hydrolase fold HCN55_RS01855 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_RS01860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCN55_RS01865 PF00355 Rieske [2Fe-2S] domain HCN55_RS01870 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HCN55_RS01870 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_RS01870 PF04324 BFD-like [2Fe-2S] binding domain HCN55_RS01870 PF18267 Rubredoxin NAD+ reductase C-terminal domain HCN55_RS01870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HCN55_RS01875 PF01568 Molydopterin dinucleotide binding domain HCN55_RS01875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCN55_RS01875 PF00384 Molybdopterin oxidoreductase HCN55_RS01880 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_RS01880 PF04324 BFD-like [2Fe-2S] binding domain HCN55_RS01880 PF18267 Rubredoxin NAD+ reductase C-terminal domain HCN55_RS01880 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HCN55_RS01885 PF07690 Major Facilitator Superfamily HCN55_RS01890 PF02649 Type I GTP cyclohydrolase folE2 HCN55_RS01895 PF03734 L,D-transpeptidase catalytic domain HCN55_RS01905 PF07683 Cobalamin synthesis protein cobW C-terminal domain HCN55_RS01905 PF02492 CobW/HypB/UreG, nucleotide-binding domain HCN55_RS01910 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS01915 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCN55_RS01925 PF06271 RDD family HCN55_RS01930 PF10925 Protein of unknown function (DUF2680) HCN55_RS01935 PF00232 Glycosyl hydrolase family 1 HCN55_RS01940 PF11033 Competence protein J (ComJ) HCN55_RS01945 PF14040 Deoxyribonuclease NucA/NucB HCN55_RS01950 PF00672 HAMP domain HCN55_RS01950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_RS01950 PF17202 Single cache domain 3 HCN55_RS01955 PF01380 SIS domain HCN55_RS01960 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HCN55_RS01965 PF01638 HxlR-like helix-turn-helix HCN55_RS01970 PF00501 AMP-binding enzyme HCN55_RS01970 PF00668 Condensation domain HCN55_RS01970 PF00550 Phosphopantetheine attachment site HCN55_RS01970 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS01975 PF00501 AMP-binding enzyme HCN55_RS01975 PF00668 Condensation domain HCN55_RS01975 PF00550 Phosphopantetheine attachment site HCN55_RS01975 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS01980 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS01980 PF00975 Thioesterase domain HCN55_RS01980 PF00550 Phosphopantetheine attachment site HCN55_RS01980 PF00668 Condensation domain HCN55_RS01980 PF00501 AMP-binding enzyme HCN55_RS01985 PF00975 Thioesterase domain HCN55_RS01990 PF07690 Major Facilitator Superfamily HCN55_RS01995 PF14317 YcxB-like protein HCN55_RS02000 PF00892 EamA-like transporter family HCN55_RS02005 PF00155 Aminotransferase class I and II HCN55_RS02005 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS02020 PF00005 ABC transporter HCN55_RS02025 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS02030 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCN55_RS02035 PF03466 LysR substrate binding domain HCN55_RS02035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS02040 PF02441 Flavoprotein HCN55_RS02045 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HCN55_RS02060 PF00561 alpha/beta hydrolase fold HCN55_RS02065 PF00854 POT family HCN55_RS02070 PF12708 Pectate lyase superfamily protein HCN55_RS02070 PF13229 Right handed beta helix region HCN55_RS02080 PF03323 Bacillus/Clostridium GerA spore germination protein HCN55_RS02085 PF05504 Spore germination B3/ GerAC like, C-terminal HCN55_RS02090 PF03845 Spore germination protein HCN55_RS02095 PF00005 ABC transporter HCN55_RS02100 PF12704 MacB-like periplasmic core domain HCN55_RS02100 PF02687 FtsX-like permease family HCN55_RS02105 PF00486 Transcriptional regulatory protein, C terminal HCN55_RS02105 PF00072 Response regulator receiver domain HCN55_RS02110 PF00512 His Kinase A (phospho-acceptor) domain HCN55_RS02110 PF00672 HAMP domain HCN55_RS02110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS02115 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_RS02120 PF11131 Rap-phr extracellular signalling HCN55_RS02125 PF09680 Family of unknown function HCN55_RS02130 PF09680 Family of unknown function HCN55_RS02135 PF13840 ACT domain HCN55_RS02135 PF00696 Amino acid kinase family HCN55_RS02140 PF01032 FecCD transport family HCN55_RS02145 PF01032 FecCD transport family HCN55_RS02150 PF00005 ABC transporter HCN55_RS02155 PF01497 Periplasmic binding protein HCN55_RS02160 PF07690 Major Facilitator Superfamily HCN55_RS02165 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS02170 PF00881 Nitroreductase family HCN55_RS02175 PF03992 Antibiotic biosynthesis monooxygenase HCN55_RS02180 PF01022 Bacterial regulatory protein, arsR family HCN55_RS02185 PF00155 Aminotransferase class I and II HCN55_RS02185 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS02190 PF00202 Aminotransferase class-III HCN55_RS02195 PF00171 Aldehyde dehydrogenase family HCN55_RS02200 PF06800 Sugar transport protein HCN55_RS02210 PF07987 Domain of unkown function (DUF1775) HCN55_RS02215 PF04234 CopC domain HCN55_RS02215 PF13115 YtkA-like HCN55_RS02215 PF05425 Copper resistance protein D HCN55_RS02220 PF08220 DeoR-like helix-turn-helix domain HCN55_RS02220 PF05573 NosL HCN55_RS02230 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCN55_RS02230 PF02378 Phosphotransferase system, EIIC HCN55_RS02235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCN55_RS02240 PF01232 Mannitol dehydrogenase Rossmann domain HCN55_RS02240 PF08125 Mannitol dehydrogenase C-terminal domain HCN55_RS02245 PF00180 Isocitrate/isopropylmalate dehydrogenase HCN55_RS02250 PF10502 Signal peptidase, peptidase S26 HCN55_RS02255 PF01738 Dienelactone hydrolase family HCN55_RS02260 PF07977 FabA-like domain HCN55_RS02275 PF03746 LamB/YcsF family HCN55_RS02280 PF01566 Natural resistance-associated macrophage protein HCN55_RS02285 PF07286 Protein of unknown function (DUF1445) HCN55_RS02290 PF02682 Carboxyltransferase domain, subdomain C and D HCN55_RS02295 PF02626 Carboxyltransferase domain, subdomain A and B HCN55_RS02300 PF01614 Bacterial transcriptional regulator HCN55_RS02300 PF09339 IclR helix-turn-helix domain HCN55_RS02305 PF13472 GDSL-like Lipase/Acylhydrolase family HCN55_RS02310 PF13129 Protein of unknown function (DUF3953) HCN55_RS02315 PF03992 Antibiotic biosynthesis monooxygenase HCN55_RS02320 PF05223 NTF2-like N-terminal transpeptidase domain HCN55_RS02320 PF03717 Penicillin-binding Protein dimerisation domain HCN55_RS02320 PF00905 Penicillin binding protein transpeptidase domain HCN55_RS02325 PF00248 Aldo/keto reductase family HCN55_RS02330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCN55_RS02330 PF00874 PRD domain HCN55_RS02330 PF05043 Mga helix-turn-helix domain HCN55_RS02330 PF08279 HTH domain HCN55_RS02330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCN55_RS02335 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS02335 PF00501 AMP-binding enzyme HCN55_RS02340 PF13649 Methyltransferase domain HCN55_RS02355 PF13302 Acetyltransferase (GNAT) domain HCN55_RS02360 PF16242 Pyridoxamine 5'-phosphate oxidase like HCN55_RS02365 PF10997 Alternate to MurJ HCN55_RS02370 PF12823 Domain of unknown function (DUF3817) HCN55_RS02375 PF01037 Lrp/AsnC ligand binding domain HCN55_RS02380 PF01751 Toprim domain HCN55_RS02380 PF01131 DNA topoisomerase HCN55_RS02390 PF00990 Diguanylate cyclase, GGDEF domain HCN55_RS02395 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) HCN55_RS02405 PF03170 Bacterial cellulose synthase subunit HCN55_RS02410 PF13520 Amino acid permease HCN55_RS02415 PF00293 NUDIX domain HCN55_RS02420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCN55_RS02420 PF00205 Thiamine pyrophosphate enzyme, central domain HCN55_RS02420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCN55_RS02435 PF01566 Natural resistance-associated macrophage protein HCN55_RS02440 PF04226 Transglycosylase associated protein HCN55_RS02445 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) HCN55_RS02450 PF12787 EcsC protein family HCN55_RS02455 PF00477 Small hydrophilic plant seed protein HCN55_RS02455 PF10685 Stress-induced bacterial acidophilic repeat motif HCN55_RS02460 PF07883 Cupin domain HCN55_RS02465 PF16291 Domain of unknown function (DUF4937 HCN55_RS02470 PF05067 Manganese containing catalase HCN55_RS02475 PF03480 Bacterial extracellular solute-binding protein, family 7 HCN55_RS02480 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HCN55_RS02480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS02480 PF17203 Single cache domain 3 HCN55_RS02485 PF00072 Response regulator receiver domain HCN55_RS02485 PF08279 HTH domain HCN55_RS02490 PF00375 Sodium:dicarboxylate symporter family HCN55_RS02495 PF01594 AI-2E family transporter HCN55_RS02500 PF00005 ABC transporter HCN55_RS02515 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HCN55_RS02515 PF02770 Acyl-CoA dehydrogenase, middle domain HCN55_RS02515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HCN55_RS02520 PF13040 Fur-regulated basic protein B HCN55_RS02530 PF16916 Dimerisation domain of Zinc Transporter HCN55_RS02530 PF01545 Cation efflux family HCN55_RS02535 PF00085 Thioredoxin HCN55_RS02540 PF07478 D-ala D-ala ligase C-terminus HCN55_RS02540 PF01820 D-ala D-ala ligase N-terminus HCN55_RS02545 PF02875 Mur ligase family, glutamate ligase domain HCN55_RS02545 PF01225 Mur ligase family, catalytic domain HCN55_RS02545 PF08245 Mur ligase middle domain HCN55_RS02550 PF00270 DEAD/DEAH box helicase HCN55_RS02550 PF00271 Helicase conserved C-terminal domain HCN55_RS02555 PF03703 Bacterial PH domain HCN55_RS02560 PF03703 Bacterial PH domain HCN55_RS02565 PF01694 Rhomboid family HCN55_RS02570 PF01648 4'-phosphopantetheinyl transferase superfamily HCN55_RS02580 PF01168 Alanine racemase, N-terminal domain HCN55_RS02580 PF00842 Alanine racemase, C-terminal domain HCN55_RS02585 PF01402 Ribbon-helix-helix protein, copG family HCN55_RS02590 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HCN55_RS02595 PF08678 Rsbr N terminal HCN55_RS02595 PF01740 STAS domain HCN55_RS02600 PF01740 STAS domain HCN55_RS02605 PF13581 Histidine kinase-like ATPase domain HCN55_RS02610 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain HCN55_RS02610 PF07228 Stage II sporulation protein E (SpoIIE) HCN55_RS02615 PF01740 STAS domain HCN55_RS02620 PF13581 Histidine kinase-like ATPase domain HCN55_RS02625 PF04542 Sigma-70 region 2 HCN55_RS02625 PF04539 Sigma-70 region 3 HCN55_RS02625 PF04545 Sigma-70, region 4 HCN55_RS02630 PF07228 Stage II sporulation protein E (SpoIIE) HCN55_RS02645 PF01878 EVE domain HCN55_RS02650 PF01047 MarR family HCN55_RS02655 PF16921 Tex protein YqgF-like domain HCN55_RS02655 PF09371 Tex-like protein N-terminal domain HCN55_RS02655 PF00575 S1 RNA binding domain HCN55_RS02655 PF17674 HHH domain HCN55_RS02665 PF17283 SprT-like zinc ribbon domain HCN55_RS02665 PF10263 SprT-like family HCN55_RS02705 PF14659 Phage integrase, N-terminal SAM-like domain HCN55_RS02705 PF00589 Phage integrase family HCN55_RS02710 PF06114 IrrE N-terminal-like domain HCN55_RS02715 PF01381 Helix-turn-helix HCN55_RS02740 PF06125 Bacterial protein of unknown function (DUF961) HCN55_RS02750 PF02486 Replication initiation factor HCN55_RS02750 PF18106 Rolling Circle replication initiation protein N-terminal domain HCN55_RS02770 PF12642 Conjugative transposon protein TcpC HCN55_RS02780 PF12648 TcpE family HCN55_RS02790 PF08960 Domain of unknown function (DUF1874) HCN55_RS02800 PF00877 NlpC/P60 family HCN55_RS02810 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) HCN55_RS02815 PF13676 TIR domain HCN55_RS02820 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_RS02835 PF00296 Luciferase-like monooxygenase HCN55_RS02840 PF01037 Lrp/AsnC ligand binding domain HCN55_RS02845 PF01037 Lrp/AsnC ligand binding domain HCN55_RS02850 PF00857 Isochorismatase family HCN55_RS02855 PF12706 Beta-lactamase superfamily domain HCN55_RS02860 PF00083 Sugar (and other) transporter HCN55_RS02860 PF07690 Major Facilitator Superfamily HCN55_RS02880 PF01965 DJ-1/PfpI family HCN55_RS02885 PF00313 'Cold-shock' DNA-binding domain HCN55_RS02900 PF02311 AraC-like ligand binding domain HCN55_RS02900 PF12833 Helix-turn-helix domain HCN55_RS02905 PF00892 EamA-like transporter family HCN55_RS02910 PF06445 GyrI-like small molecule binding domain HCN55_RS02910 PF12833 Helix-turn-helix domain HCN55_RS02915 PF00155 Aminotransferase class I and II HCN55_RS02915 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS02920 PF07690 Major Facilitator Superfamily HCN55_RS02930 PF08818 Domain of unknown function (DU1801) HCN55_RS02940 PF00892 EamA-like transporter family HCN55_RS02945 PF00155 Aminotransferase class I and II HCN55_RS02945 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS02950 PF01575 MaoC like domain HCN55_RS02955 PF06821 Serine hydrolase HCN55_RS02960 PF01638 HxlR-like helix-turn-helix HCN55_RS02965 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HCN55_RS02965 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HCN55_RS02970 PF01638 HxlR-like helix-turn-helix HCN55_RS02975 PF02525 Flavodoxin-like fold HCN55_RS02980 PF07690 Major Facilitator Superfamily HCN55_RS02985 PF16859 Tetracyclin repressor-like, C-terminal domain HCN55_RS02985 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS02990 PF01022 Bacterial regulatory protein, arsR family HCN55_RS02995 PF02040 Arsenical pump membrane protein HCN55_RS03005 PF12746 GNAT acetyltransferase HCN55_RS03010 PF00892 EamA-like transporter family HCN55_RS03015 PF00155 Aminotransferase class I and II HCN55_RS03015 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS03020 PF01613 Flavin reductase like domain HCN55_RS03030 PF02627 Carboxymuconolactone decarboxylase family HCN55_RS03045 PF07730 Histidine kinase HCN55_RS03045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS03050 PF00072 Response regulator receiver domain HCN55_RS03050 PF00196 Bacterial regulatory proteins, luxR family HCN55_RS03055 PF03176 MMPL family HCN55_RS03060 PF12697 Alpha/beta hydrolase family HCN55_RS03065 PF04474 Protein of unknown function (DUF554) HCN55_RS03070 PF06445 GyrI-like small molecule binding domain HCN55_RS03070 PF13411 MerR HTH family regulatory protein HCN55_RS03075 PF16916 Dimerisation domain of Zinc Transporter HCN55_RS03075 PF01545 Cation efflux family HCN55_RS03080 PF00881 Nitroreductase family HCN55_RS03085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_RS03090 PF07681 DoxX HCN55_RS03095 PF00085 Thioredoxin HCN55_RS03100 PF10676 Spore germination protein gerPA/gerPF HCN55_RS03110 PF10676 Spore germination protein gerPA/gerPF HCN55_RS03115 PF04239 Protein of unknown function (DUF421) HCN55_RS03120 PF04239 Protein of unknown function (DUF421) HCN55_RS03125 PF00011 Hsp20/alpha crystallin family HCN55_RS03130 PF10676 Spore germination protein gerPA/gerPF HCN55_RS03135 PF10676 Spore germination protein gerPA/gerPF HCN55_RS03140 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS03145 PF13564 DoxX-like family HCN55_RS03150 PF00583 Acetyltransferase (GNAT) family HCN55_RS03160 PF00324 Amino acid permease HCN55_RS03165 PF05163 DinB family HCN55_RS03170 PF01047 MarR family HCN55_RS03175 PF03176 MMPL family HCN55_RS03180 PF00881 Nitroreductase family HCN55_RS03185 PF01047 MarR family HCN55_RS03190 PF07690 Major Facilitator Superfamily HCN55_RS03195 PF01925 Sulfite exporter TauE/SafE HCN55_RS03200 PF07729 FCD domain HCN55_RS03200 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS03205 PF00704 Glycosyl hydrolases family 18 HCN55_RS03205 PF01476 LysM domain HCN55_RS03210 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase HCN55_RS03215 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HCN55_RS03215 PF11611 Domain of unknown function (DUF4352) HCN55_RS03220 PF00245 Alkaline phosphatase HCN55_RS03225 PF08818 Domain of unknown function (DU1801) HCN55_RS03230 PF16302 Domain of unknown function (DUF4944) HCN55_RS03235 PF00583 Acetyltransferase (GNAT) family HCN55_RS03240 PF01966 HD domain HCN55_RS03245 PF07563 Protein of unknown function (DUF1541) HCN55_RS03250 PF07690 Major Facilitator Superfamily HCN55_RS03255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCN55_RS03260 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HCN55_RS03265 PF02378 Phosphotransferase system, EIIC HCN55_RS03270 PF00232 Glycosyl hydrolase family 1 HCN55_RS03275 PF07702 UTRA domain HCN55_RS03275 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS03280 PF00480 ROK family HCN55_RS03285 PF01238 Phosphomannose isomerase type I HCN55_RS03290 PF02156 Glycosyl hydrolase family 26 HCN55_RS03335 PF00586 AIR synthase related protein, N-terminal domain HCN55_RS03335 PF02769 AIR synthase related protein, C-terminal domain HCN55_RS03340 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HCN55_RS03345 PF00814 Glycoprotease family HCN55_RS03350 PF00583 Acetyltransferase (GNAT) family HCN55_RS03355 PF00814 Glycoprotease family HCN55_RS03360 PF16326 ABC transporter C-terminal domain HCN55_RS03360 PF12848 ABC transporter HCN55_RS03360 PF00005 ABC transporter HCN55_RS03365 PF01967 MoaC family HCN55_RS03370 PF02629 CoA binding domain HCN55_RS03370 PF06971 Putative DNA-binding protein N-terminus HCN55_RS03375 PF02416 mttA/Hcf106 family HCN55_RS03380 PF00902 Sec-independent protein translocase protein (TatC) HCN55_RS03385 PF14146 Domain of unknown function (DUF4305) HCN55_RS03390 PF02517 CPBP intramembrane metalloprotease HCN55_RS03395 PF00166 Chaperonin 10 Kd subunit HCN55_RS03400 PF00118 TCP-1/cpn60 chaperonin family HCN55_RS03425 PF00145 C-5 cytosine-specific DNA methylase HCN55_RS03430 PF00145 C-5 cytosine-specific DNA methylase HCN55_RS03445 PF07728 AAA domain (dynein-related subfamily) HCN55_RS03450 PF09563 LlaJI restriction endonuclease HCN55_RS03465 PF13176 Tetratricopeptide repeat HCN55_RS03465 PF00931 NB-ARC domain HCN55_RS03470 PF00107 Zinc-binding dehydrogenase HCN55_RS03470 PF08240 Alcohol dehydrogenase GroES-like domain HCN55_RS03480 PF00294 pfkB family carbohydrate kinase HCN55_RS03485 PF04012 PspA/IM30 family HCN55_RS03490 PF08271 TFIIB zinc-binding HCN55_RS03495 PF04536 TPM domain HCN55_RS03500 PF13421 SPFH domain-Band 7 family HCN55_RS03505 PF07885 Ion channel HCN55_RS03510 PF00083 Sugar (and other) transporter HCN55_RS03515 PF08240 Alcohol dehydrogenase GroES-like domain HCN55_RS03515 PF00107 Zinc-binding dehydrogenase HCN55_RS03520 PF03330 Lytic transglycolase HCN55_RS03525 PF07676 WD40-like Beta Propeller Repeat HCN55_RS03535 PF14169 Cold-inducible protein YdjO HCN55_RS03540 PF12697 Alpha/beta hydrolase family HCN55_RS03545 PF13170 Protein of unknown function (DUF4003) HCN55_RS03550 PF07732 Multicopper oxidase HCN55_RS03550 PF07731 Multicopper oxidase HCN55_RS03550 PF00394 Multicopper oxidase HCN55_RS03555 PF00324 Amino acid permease HCN55_RS03565 PF16916 Dimerisation domain of Zinc Transporter HCN55_RS03565 PF01545 Cation efflux family HCN55_RS03570 PF17863 AAA lid domain HCN55_RS03570 PF07726 ATPase family associated with various cellular activities (AAA) HCN55_RS03575 PF01882 Protein of unknown function DUF58 HCN55_RS03580 PF01841 Transglutaminase-like superfamily HCN55_RS03580 PF11992 Domain of unknown function (DUF3488) HCN55_RS03580 PF13559 Domain of unknown function (DUF4129) HCN55_RS03585 PF02540 NAD synthase HCN55_RS03585 PF00117 Glutamine amidotransferase class-I HCN55_RS03585 PF00958 GMP synthase C terminal domain HCN55_RS03590 PF00860 Permease family HCN55_RS03600 PF13076 Fur-regulated basic protein A HCN55_RS03605 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HCN55_RS03610 PF14044 NETI protein HCN55_RS03615 PF00731 AIR carboxylase HCN55_RS03620 PF02222 ATP-grasp domain HCN55_RS03620 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HCN55_RS03625 PF10397 Adenylosuccinate lyase C-terminus HCN55_RS03625 PF00206 Lyase HCN55_RS03630 PF01259 SAICAR synthetase HCN55_RS03635 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase HCN55_RS03645 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HCN55_RS03645 PF02769 AIR synthase related protein, C-terminal domain HCN55_RS03645 PF00586 AIR synthase related protein, N-terminal domain HCN55_RS03650 PF00156 Phosphoribosyl transferase domain HCN55_RS03655 PF00586 AIR synthase related protein, N-terminal domain HCN55_RS03655 PF02769 AIR synthase related protein, C-terminal domain HCN55_RS03660 PF00551 Formyl transferase HCN55_RS03665 PF01808 AICARFT/IMPCHase bienzyme HCN55_RS03665 PF02142 MGS-like domain HCN55_RS03670 PF02843 Phosphoribosylglycinamide synthetase, C domain HCN55_RS03670 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HCN55_RS03670 PF02844 Phosphoribosylglycinamide synthetase, N domain HCN55_RS03675 PF01037 Lrp/AsnC ligand binding domain HCN55_RS03680 PF13520 Amino acid permease HCN55_RS03685 PF11127 Protein of unknown function (DUF2892) HCN55_RS03690 PF01979 Amidohydrolase family HCN55_RS03690 PF13382 Adenine deaminase C-terminal domain HCN55_RS03695 PF17479 Protein of unknown function (DUF3048) C-terminal domain HCN55_RS03695 PF11258 Protein of unknown function (DUF3048) N-terminal domain HCN55_RS03700 PF01371 Trp repressor protein HCN55_RS03705 PF01645 Conserved region in glutamate synthase HCN55_RS03710 PF01884 PcrB family HCN55_RS03715 PF00580 UvrD/REP helicase N-terminal domain HCN55_RS03715 PF13361 UvrD-like helicase C-terminal domain HCN55_RS03720 PF00533 BRCA1 C Terminus (BRCT) domain HCN55_RS03720 PF01653 NAD-dependent DNA ligase adenylation domain HCN55_RS03720 PF03120 NAD-dependent DNA ligase OB-fold domain HCN55_RS03720 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HCN55_RS03720 PF12826 Helix-hairpin-helix motif HCN55_RS03725 PF07537 CamS sex pheromone cAM373 precursor HCN55_RS03730 PF01636 Phosphotransferase enzyme family HCN55_RS03735 PF02308 MgtC family HCN55_RS03740 PF00474 Sodium:solute symporter family HCN55_RS03745 PF02686 Glu-tRNAGln amidotransferase C subunit HCN55_RS03750 PF01425 Amidase HCN55_RS03755 PF02637 GatB domain HCN55_RS03755 PF02934 GatB/GatE catalytic domain HCN55_RS03760 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS03765 PF00873 AcrB/AcrD/AcrF family HCN55_RS03770 PF00781 Diacylglycerol kinase catalytic domain HCN55_RS03775 PF01938 TRAM domain HCN55_RS03775 PF05958 tRNA (Uracil-5-)-methyltransferase HCN55_RS03780 PF07508 Recombinase HCN55_RS03780 PF13408 Recombinase zinc beta ribbon domain HCN55_RS03785 PF00239 Resolvase, N terminal domain HCN55_RS03785 PF18010 Cry35Ab1 HTH C-terminal domain HCN55_RS03800 PF10544 T5orf172 domain HCN55_RS03815 PF04634 Protein of unknown function, DUF600 HCN55_RS03820 PF04740 LXG domain of WXG superfamily HCN55_RS03830 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_RS03830 PF13176 Tetratricopeptide repeat HCN55_RS03840 PF01709 Transcriptional regulator HCN55_RS03850 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS03855 PF12680 SnoaL-like domain HCN55_RS03860 PF01370 NAD dependent epimerase/dehydratase family HCN55_RS03865 PF11007 Spore coat associated protein JA (CotJA) HCN55_RS03870 PF12652 CotJB protein HCN55_RS03875 PF05067 Manganese containing catalase HCN55_RS03880 PF00583 Acetyltransferase (GNAT) family HCN55_RS03885 PF14150 YesK-like protein HCN55_RS03890 PF04854 Protein of unknown function, DUF624 HCN55_RS03895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS03895 PF02743 Cache domain HCN55_RS03895 PF00672 HAMP domain HCN55_RS03895 PF06580 Histidine kinase HCN55_RS03900 PF00072 Response regulator receiver domain HCN55_RS03900 PF12833 Helix-turn-helix domain HCN55_RS03905 PF13416 Bacterial extracellular solute-binding protein HCN55_RS03910 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS03915 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS03920 PF07470 Glycosyl Hydrolase Family 88 HCN55_RS03925 PF12833 Helix-turn-helix domain HCN55_RS03930 PF13472 GDSL-like Lipase/Acylhydrolase family HCN55_RS03935 PF09224 Domain of unknown function (DUF1961) HCN55_RS03940 PF04854 Protein of unknown function, DUF624 HCN55_RS03945 PF18370 Rhamnogalacturonan I lyases beta-sheet domain HCN55_RS03950 PF18370 Rhamnogalacturonan I lyases beta-sheet domain HCN55_RS03950 PF01839 FG-GAP repeat HCN55_RS03955 PF00657 GDSL-like Lipase/Acylhydrolase HCN55_RS03960 PF02449 Beta-galactosidase HCN55_RS03960 PF08533 Beta-galactosidase C-terminal domain HCN55_RS03960 PF08532 Beta-galactosidase trimerisation domain HCN55_RS03970 PF01547 Bacterial extracellular solute-binding protein HCN55_RS03975 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS03980 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS03985 PF02056 Family 4 glycosyl hydrolase HCN55_RS03985 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCN55_RS03990 PF04239 Protein of unknown function (DUF421) HCN55_RS03995 PF03992 Antibiotic biosynthesis monooxygenase HCN55_RS04000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_RS04015 PF10055 Uncharacterized small protein (DUF2292) HCN55_RS04020 PF01027 Inhibitor of apoptosis-promoting Bax1 HCN55_RS04025 PF00892 EamA-like transporter family HCN55_RS04030 PF01047 MarR family HCN55_RS04035 PF01494 FAD binding domain HCN55_RS04040 PF13037 Domain of unknown function (DUF3898) HCN55_RS04040 PF13039 Protein of unknown function (DUF3900) HCN55_RS04045 PF00667 FAD binding domain HCN55_RS04045 PF00067 Cytochrome P450 HCN55_RS04045 PF00258 Flavodoxin HCN55_RS04045 PF00175 Oxidoreductase NAD-binding domain HCN55_RS04050 PF00884 Sulfatase HCN55_RS04055 PF00483 Nucleotidyl transferase HCN55_RS04060 PF16363 GDP-mannose 4,6 dehydratase HCN55_RS04065 PF03407 Nucleotide-diphospho-sugar transferase HCN55_RS04070 PF00535 Glycosyl transferase family 2 HCN55_RS04075 PF03407 Nucleotide-diphospho-sugar transferase HCN55_RS04080 PF07690 Major Facilitator Superfamily HCN55_RS04085 PF13419 Haloacid dehalogenase-like hydrolase HCN55_RS04090 PF13520 Amino acid permease HCN55_RS04095 PF00171 Aldehyde dehydrogenase family HCN55_RS04100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_RS04105 PF12848 ABC transporter HCN55_RS04105 PF00005 ABC transporter HCN55_RS04105 PF16326 ABC transporter C-terminal domain HCN55_RS04110 PF10787 Uncharacterised protein from bacillus cereus group HCN55_RS04115 PF13411 MerR HTH family regulatory protein HCN55_RS04120 PF07690 Major Facilitator Superfamily HCN55_RS04130 PF00005 ABC transporter HCN55_RS04130 PF12848 ABC transporter HCN55_RS04135 PF00271 Helicase conserved C-terminal domain HCN55_RS04135 PF00270 DEAD/DEAH box helicase HCN55_RS04140 PF00583 Acetyltransferase (GNAT) family HCN55_RS04145 PF00107 Zinc-binding dehydrogenase HCN55_RS04145 PF16884 N-terminal domain of oxidoreductase HCN55_RS04150 PF07690 Major Facilitator Superfamily HCN55_RS04155 PF03781 Sulfatase-modifying factor enzyme 1 HCN55_RS04160 PF00005 ABC transporter HCN55_RS04165 PF01032 FecCD transport family HCN55_RS04170 PF01032 FecCD transport family HCN55_RS04175 PF01497 Periplasmic binding protein HCN55_RS04180 PF11486 Protein of unknown function (DUF3212) HCN55_RS04185 PF11181 Heat induced stress protein YflT HCN55_RS04190 PF00544 Pectate lyase HCN55_RS04195 PF00939 Sodium:sulfate symporter transmembrane region HCN55_RS04200 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HCN55_RS04200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS04205 PF12431 Transcriptional regulator HCN55_RS04205 PF08279 HTH domain HCN55_RS04205 PF00072 Response regulator receiver domain HCN55_RS04210 PF03401 Tripartite tricarboxylate transporter family receptor HCN55_RS04215 PF03600 Citrate transporter HCN55_RS04220 PF00753 Metallo-beta-lactamase superfamily HCN55_RS04225 PF02898 Nitric oxide synthase, oxygenase domain HCN55_RS04230 PF00708 Acylphosphatase HCN55_RS04235 PF03475 3-alpha domain HCN55_RS04235 PF03473 MOSC domain HCN55_RS04240 PF11121 Protein of unknown function (DUF2639) HCN55_RS04250 PF11588 Protein of unknown function (DUF3243) HCN55_RS04255 PF00557 Metallopeptidase family M24 HCN55_RS04260 PF02378 Phosphotransferase system, EIIC HCN55_RS04260 PF00367 phosphotransferase system, EIIB HCN55_RS04265 PF00884 Sulfatase HCN55_RS04275 PF09350 Domain of unknown function (DUF1992) HCN55_RS04285 PF03845 Spore germination protein HCN55_RS04295 PF05504 Spore germination B3/ GerAC like, C-terminal HCN55_RS04300 PF03323 Bacillus/Clostridium GerA spore germination protein HCN55_RS04305 PF02378 Phosphotransferase system, EIIC HCN55_RS04305 PF00367 phosphotransferase system, EIIB HCN55_RS04310 PF00128 Alpha amylase, catalytic domain HCN55_RS04310 PF16657 Maltogenic Amylase, C-terminal domain HCN55_RS04315 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS04315 PF07702 UTRA domain HCN55_RS04320 PF00881 Nitroreductase family HCN55_RS04325 PF00149 Calcineurin-like phosphoesterase HCN55_RS04325 PF02872 5'-nucleotidase, C-terminal domain HCN55_RS04330 PF01965 DJ-1/PfpI family HCN55_RS04335 PF07690 Major Facilitator Superfamily HCN55_RS04340 PF06569 Protein of unknown function (DUF1128) HCN55_RS04345 PF01451 Low molecular weight phosphotyrosine protein phosphatase HCN55_RS04355 PF03631 Virulence factor BrkB HCN55_RS04360 PF07690 Major Facilitator Superfamily HCN55_RS04365 PF01699 Sodium/calcium exchanger protein HCN55_RS04370 PF14167 YfkD-like protein HCN55_RS04375 PF00924 Mechanosensitive ion channel HCN55_RS04380 PF08756 YfkB-like domain HCN55_RS04380 PF04055 Radical SAM superfamily HCN55_RS04390 PF01522 Polysaccharide deacetylase HCN55_RS04395 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCN55_RS04395 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HCN55_RS04400 PF01544 CorA-like Mg2+ transporter protein HCN55_RS04405 PF00730 HhH-GPD superfamily base excision DNA repair protein HCN55_RS04410 PF01938 TRAM domain HCN55_RS04410 PF05958 tRNA (Uracil-5-)-methyltransferase HCN55_RS04415 PF14118 YfzA-like protein HCN55_RS04420 PF01207 Dihydrouridine synthase (Dus) HCN55_RS04435 PF00676 Dehydrogenase E1 component HCN55_RS04440 PF02779 Transketolase, pyrimidine binding domain HCN55_RS04440 PF02780 Transketolase, C-terminal domain HCN55_RS04445 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HCN55_RS04445 PF00364 Biotin-requiring enzyme HCN55_RS04445 PF02817 e3 binding domain HCN55_RS04450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HCN55_RS04450 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_RS04455 PF00158 Sigma-54 interaction domain HCN55_RS04455 PF02954 Bacterial regulatory protein, Fis family HCN55_RS04455 PF01590 GAF domain HCN55_RS04460 PF08141 Small acid-soluble spore protein H family HCN55_RS04465 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HCN55_RS04470 PF17353 Family of unknown function (DUF5381) HCN55_RS04475 PF17353 Family of unknown function (DUF5381) HCN55_RS04490 PF06013 Proteins of 100 residues with WXG HCN55_RS04495 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCN55_RS04495 PF02056 Family 4 glycosyl hydrolase HCN55_RS04500 PF01380 SIS domain HCN55_RS04500 PF01418 Helix-turn-helix domain, rpiR family HCN55_RS04505 PF00367 phosphotransferase system, EIIB HCN55_RS04505 PF02378 Phosphotransferase system, EIIC HCN55_RS04510 PF00005 ABC transporter HCN55_RS04510 PF00664 ABC transporter transmembrane region HCN55_RS04515 PF00664 ABC transporter transmembrane region HCN55_RS04515 PF00005 ABC transporter HCN55_RS04520 PF07681 DoxX HCN55_RS04525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_RS04530 PF02311 AraC-like ligand binding domain HCN55_RS04530 PF12833 Helix-turn-helix domain HCN55_RS04535 PF00083 Sugar (and other) transporter HCN55_RS04540 PF01261 Xylose isomerase-like TIM barrel HCN55_RS04545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCN55_RS04545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCN55_RS04550 PF07730 Histidine kinase HCN55_RS04555 PF00072 Response regulator receiver domain HCN55_RS04555 PF00196 Bacterial regulatory proteins, luxR family HCN55_RS04560 PF00005 ABC transporter HCN55_RS04575 PF10400 Virulence activator alpha C-term HCN55_RS04575 PF03551 Transcriptional regulator PadR-like family HCN55_RS04580 PF01674 Lipase (class 2) HCN55_RS04585 PF01757 Acyltransferase family HCN55_RS04590 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS04590 PF17922 Tetracyclin repressor-like, C-terminal domain HCN55_RS04595 PF07690 Major Facilitator Superfamily HCN55_RS04600 PF12867 DinB superfamily HCN55_RS04605 PF07690 Major Facilitator Superfamily HCN55_RS04610 PF01047 MarR family HCN55_RS04615 PF03706 Lysylphosphatidylglycerol synthase TM region HCN55_RS04615 PF09924 Uncharacterised conserved protein (DUF2156) HCN55_RS04620 PF01497 Periplasmic binding protein HCN55_RS04625 PF01032 FecCD transport family HCN55_RS04630 PF01032 FecCD transport family HCN55_RS04635 PF02567 Phenazine biosynthesis-like protein HCN55_RS04640 PF00881 Nitroreductase family HCN55_RS04645 PF14151 YfhD-like protein HCN55_RS04650 PF14152 YfhE-like protein HCN55_RS04655 PF08338 Domain of unknown function (DUF1731) HCN55_RS04655 PF01370 NAD dependent epimerase/dehydratase family HCN55_RS04660 PF02631 RecX family HCN55_RS04665 PF08838 Protein of unknown function (DUF1811) HCN55_RS04670 PF07690 Major Facilitator Superfamily HCN55_RS04675 PF08176 Small acid-soluble spore protein K family HCN55_RS04680 PF14043 WVELL protein HCN55_RS04685 PF08239 Bacterial SH3 domain HCN55_RS04690 PF13630 SdpI/YhfL protein family HCN55_RS04695 PF00561 alpha/beta hydrolase fold HCN55_RS04700 PF00535 Glycosyl transferase family 2 HCN55_RS04705 PF09586 Bacterial membrane protein YfhO HCN55_RS04710 PF04307 LexA-binding, inner membrane-associated putative hydrolase HCN55_RS04715 PF00730 HhH-GPD superfamily base excision DNA repair protein HCN55_RS04715 PF14815 NUDIX domain HCN55_RS04730 PF04259 Small, acid-soluble spore protein, gamma-type HCN55_RS04735 PF14182 YgaB-like protein HCN55_RS04740 PF04167 Protein of unknown function (DUF402) HCN55_RS04745 PF00664 ABC transporter transmembrane region HCN55_RS04745 PF00005 ABC transporter HCN55_RS04750 PF06081 Aromatic acid exporter family member 1 HCN55_RS04755 PF00202 Aminotransferase class-III HCN55_RS04760 PF00578 AhpC/TSA family HCN55_RS04765 PF01475 Ferric uptake regulator family HCN55_RS04770 PF11023 Zinc-ribbon containing domain HCN55_RS04775 PF18576 Helix-turn-helix domain HCN55_RS04775 PF14540 Nucleotidyltransferase-like HCN55_RS04875 PF07070 SpoOM protein HCN55_RS04885 PF07875 Coat F domain HCN55_RS04890 PF03575 Peptidase family S51 HCN55_RS04895 PF01964 Radical SAM ThiC family HCN55_RS04895 PF13667 ThiC-associated domain HCN55_RS04900 PF01565 FAD binding domain HCN55_RS04900 PF08031 Berberine and berberine like HCN55_RS04905 PF13040 Fur-regulated basic protein B HCN55_RS04910 PF00199 Catalase HCN55_RS04910 PF06628 Catalase-related immune-responsive HCN55_RS04915 PF00005 ABC transporter HCN55_RS04920 PF09084 NMT1/THI5 like HCN55_RS04925 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS04930 PF00296 Luciferase-like monooxygenase HCN55_RS04940 PF00253 Ribosomal protein S14p/S29e HCN55_RS04950 PF01381 Helix-turn-helix HCN55_RS04965 PF08331 Domain of unknown function (DUF1730) HCN55_RS04970 PF12671 Putative amidase domain HCN55_RS04975 PF00588 SpoU rRNA Methylase family HCN55_RS04980 PF13171 Protein of unknown function (DUF4004) HCN55_RS04985 PF04519 Polymer-forming cytoskeletal HCN55_RS04995 PF06798 PrkA serine protein kinase C-terminal domain HCN55_RS04995 PF08298 PrkA AAA domain HCN55_RS05000 PF04285 Protein of unknown function (DUF444) HCN55_RS05005 PF01047 MarR family HCN55_RS05015 PF07690 Major Facilitator Superfamily HCN55_RS05020 PF03358 NADPH-dependent FMN reductase HCN55_RS05040 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS05045 PF00005 ABC transporter HCN55_RS05050 PF00005 ABC transporter HCN55_RS05055 PF12679 ABC-2 family transporter protein HCN55_RS05060 PF00313 'Cold-shock' DNA-binding domain HCN55_RS05065 PF03180 NLPA lipoprotein HCN55_RS05070 PF07694 5TMR of 5TMR-LYT HCN55_RS05070 PF00990 Diguanylate cyclase, GGDEF domain HCN55_RS05075 PF00375 Sodium:dicarboxylate symporter family HCN55_RS05085 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) HCN55_RS05095 PF07875 Coat F domain HCN55_RS05100 PF00149 Calcineurin-like phosphoesterase HCN55_RS05100 PF00565 Staphylococcal nuclease homologue HCN55_RS05100 PF02872 5'-nucleotidase, C-terminal domain HCN55_RS05100 PF00746 LPXTG cell wall anchor motif HCN55_RS05105 PF04203 Sortase domain HCN55_RS05110 PF00849 RNA pseudouridylate synthase HCN55_RS05110 PF01479 S4 domain HCN55_RS05115 PF17326 Family of unknown function (DUF5365) HCN55_RS05120 PF00571 CBS domain HCN55_RS05125 PF13419 Haloacid dehalogenase-like hydrolase HCN55_RS05130 PF00795 Carbon-nitrogen hydrolase HCN55_RS05130 PF00583 Acetyltransferase (GNAT) family HCN55_RS05135 PF00202 Aminotransferase class-III HCN55_RS05140 PF04309 Glycerol-3-phosphate responsive antiterminator HCN55_RS05145 PF00230 Major intrinsic protein HCN55_RS05150 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCN55_RS05150 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCN55_RS05155 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HCN55_RS05155 PF01266 FAD dependent oxidoreductase HCN55_RS05160 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HCN55_RS05160 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HCN55_RS05160 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HCN55_RS05160 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HCN55_RS05165 PF13185 GAF domain HCN55_RS05165 PF07730 Histidine kinase HCN55_RS05170 PF00072 Response regulator receiver domain HCN55_RS05170 PF00196 Bacterial regulatory proteins, luxR family HCN55_RS05175 PF03358 NADPH-dependent FMN reductase HCN55_RS05180 PF14148 YhdB-like protein HCN55_RS05185 PF13028 Protein of unknown function (DUF3889) HCN55_RS05190 PF01476 LysM domain HCN55_RS05190 PF00877 NlpC/P60 family HCN55_RS05195 PF02082 Transcriptional regulator HCN55_RS05200 PF05552 Conserved TM helix HCN55_RS05205 PF04293 SpoVR like protein HCN55_RS05210 PF00245 Alkaline phosphatase HCN55_RS05215 PF01476 LysM domain HCN55_RS05215 PF00877 NlpC/P60 family HCN55_RS05220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS05220 PF03466 LysR substrate binding domain HCN55_RS05225 PF00285 Citrate synthase, C-terminal domain HCN55_RS05235 PF13520 Amino acid permease HCN55_RS05240 PF00209 Sodium:neurotransmitter symporter family HCN55_RS05245 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS05245 PF00155 Aminotransferase class I and II HCN55_RS05250 PF00583 Acetyltransferase (GNAT) family HCN55_RS05255 PF17453 Sigma-M inhibitor HCN55_RS05260 PF13791 Sigma factor regulator C-terminal HCN55_RS05260 PF13800 Sigma factor regulator N-terminal HCN55_RS05265 PF04542 Sigma-70 region 2 HCN55_RS05265 PF08281 Sigma-70, region 4 HCN55_RS05270 PF00248 Aldo/keto reductase family HCN55_RS05275 PF01553 Acyltransferase HCN55_RS05280 PF01595 Cyclin M transmembrane N-terminal domain HCN55_RS05280 PF03471 Transporter associated domain HCN55_RS05280 PF00571 CBS domain HCN55_RS05285 PF13411 MerR HTH family regulatory protein HCN55_RS05290 PF00155 Aminotransferase class I and II HCN55_RS05295 PF00571 CBS domain HCN55_RS05295 PF03471 Transporter associated domain HCN55_RS05295 PF01595 Cyclin M transmembrane N-terminal domain HCN55_RS05300 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HCN55_RS05305 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HCN55_RS05310 PF03009 Glycerophosphoryl diester phosphodiesterase family HCN55_RS05315 PF17444 Uncharacterized YhdX-like HCN55_RS05320 PF00924 Mechanosensitive ion channel HCN55_RS05325 PF02146 Sir2 family HCN55_RS05330 PF01522 Polysaccharide deacetylase HCN55_RS05335 PF01063 Amino-transferase class IV HCN55_RS05340 PF03553 Na+/H+ antiporter family HCN55_RS05345 PF00582 Universal stress protein family HCN55_RS05355 PF00005 ABC transporter HCN55_RS05355 PF00664 ABC transporter transmembrane region HCN55_RS05360 PF00005 ABC transporter HCN55_RS05360 PF00664 ABC transporter transmembrane region HCN55_RS05365 PF13460 NAD(P)H-binding HCN55_RS05375 PF00269 Small, acid-soluble spore proteins, alpha/beta type HCN55_RS05380 PF17277 Family of unknown function (DUF5342) HCN55_RS05385 PF14398 YheC/D like ATP-grasp HCN55_RS05390 PF14398 YheC/D like ATP-grasp HCN55_RS05395 PF04286 Protein of unknown function (DUF445) HCN55_RS05400 PF06133 Control of competence regulator ComK, YlbF/YmcA HCN55_RS05405 PF08713 DNA alkylation repair enzyme HCN55_RS05415 PF04055 Radical SAM superfamily HCN55_RS05420 PF00999 Sodium/hydrogen exchanger family HCN55_RS05425 PF02080 TrkA-C domain HCN55_RS05435 PF00378 Enoyl-CoA hydratase/isomerase HCN55_RS05440 PF14120 YhzD-like protein HCN55_RS05445 PF13732 Domain of unknown function (DUF4162) HCN55_RS05445 PF00005 ABC transporter HCN55_RS05455 PF00149 Calcineurin-like phosphoesterase HCN55_RS05460 PF13514 AAA domain HCN55_RS05465 PF01966 HD domain HCN55_RS05470 PF14147 Sporulation protein YhaL HCN55_RS05480 PF09680 Family of unknown function HCN55_RS05485 PF09680 Family of unknown function HCN55_RS05495 PF11667 Putative zincin peptidase HCN55_RS05500 PF08963 Protein of unknown function (DUF1878) HCN55_RS05505 PF01047 MarR family HCN55_RS05510 PF12732 YtxH-like protein HCN55_RS05520 PF17099 Tryptophan transporter TrpP HCN55_RS05525 PF00266 Aminotransferase class-V HCN55_RS05530 PF01230 HIT domain HCN55_RS05535 PF00005 ABC transporter HCN55_RS05540 PF05975 Bacterial ABC transporter protein EcsB HCN55_RS05545 PF12787 EcsC protein family HCN55_RS05550 PF07687 Peptidase dimerisation domain HCN55_RS05550 PF01546 Peptidase family M20/M25/M40 HCN55_RS05565 PF03992 Antibiotic biosynthesis monooxygenase HCN55_RS05570 PF00912 Transglycosylase HCN55_RS05570 PF00905 Penicillin binding protein transpeptidase domain HCN55_RS05575 PF01208 Uroporphyrinogen decarboxylase (URO-D) HCN55_RS05590 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS05590 PF17932 Tetracyclin repressor-like, C-terminal domain HCN55_RS05600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HCN55_RS05600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HCN55_RS05605 PF10086 YhfC intramembrane metalloprotease HCN55_RS05615 PF05343 M42 glutamyl aminopeptidase HCN55_RS05620 PF04266 ASCH domain HCN55_RS05625 PF00375 Sodium:dicarboxylate symporter family HCN55_RS05630 PF14149 YhfH-like protein HCN55_RS05635 PF12706 Beta-lactamase superfamily domain HCN55_RS05640 PF03099 Biotin/lipoate A/B protein ligase family HCN55_RS05640 PF10437 Bacterial lipoate protein ligase C-terminus HCN55_RS05645 PF13460 NAD(P)H-binding HCN55_RS05650 PF00501 AMP-binding enzyme HCN55_RS05650 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS05660 PF16491 CAAX prenyl protease N-terminal, five membrane helices HCN55_RS05660 PF01435 Peptidase family M48 HCN55_RS05665 PF05922 Peptidase inhibitor I9 HCN55_RS05665 PF00082 Subtilase family HCN55_RS05670 PF00583 Acetyltransferase (GNAT) family HCN55_RS05675 PF08240 Alcohol dehydrogenase GroES-like domain HCN55_RS05675 PF00107 Zinc-binding dehydrogenase HCN55_RS05680 PF01497 Periplasmic binding protein HCN55_RS05685 PF00300 Histidine phosphatase superfamily (branch 1) HCN55_RS05690 PF02803 Thiolase, C-terminal domain HCN55_RS05690 PF00108 Thiolase, N-terminal domain HCN55_RS05695 PF00501 AMP-binding enzyme HCN55_RS05695 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS05700 PF02632 BioY family HCN55_RS05705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_RS05710 PF01266 FAD dependent oxidoreductase HCN55_RS05710 PF00355 Rieske [2Fe-2S] domain HCN55_RS05720 PF08858 IDEAL domain HCN55_RS05725 PF06338 ComK protein HCN55_RS05735 PF05901 Excalibur calcium-binding domain HCN55_RS05740 PF00474 Sodium:solute symporter family HCN55_RS05745 PF11755 Protein of unknown function (DUF3311) HCN55_RS05755 PF09335 SNARE associated Golgi protein HCN55_RS05760 PF10502 Signal peptidase, peptidase S26 HCN55_RS05765 PF01494 FAD binding domain HCN55_RS05770 PF01047 MarR family HCN55_RS05775 PF07690 Major Facilitator Superfamily HCN55_RS05780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCN55_RS05780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCN55_RS05785 PF05116 Sucrose-6F-phosphate phosphohydrolase HCN55_RS05790 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HCN55_RS05795 PF00356 Bacterial regulatory proteins, lacI family HCN55_RS05800 PF05145 Transition state regulatory protein AbrB HCN55_RS05805 PF07690 Major Facilitator Superfamily HCN55_RS05810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCN55_RS05810 PF12793 Sugar transport-related sRNA regulator N-term HCN55_RS05815 PF03860 Domain of Unknown Function (DUF326) HCN55_RS05820 PF02915 Rubrerythrin HCN55_RS05825 PF13361 UvrD-like helicase C-terminal domain HCN55_RS05825 PF12705 PD-(D/E)XK nuclease superfamily HCN55_RS05830 PF00580 UvrD/REP helicase N-terminal domain HCN55_RS05830 PF12705 PD-(D/E)XK nuclease superfamily HCN55_RS05830 PF13361 UvrD-like helicase C-terminal domain HCN55_RS05835 PF12320 Type 5 capsule protein repressor C-terminal domain HCN55_RS05835 PF00149 Calcineurin-like phosphoesterase HCN55_RS05840 PF13476 AAA domain HCN55_RS05850 PF10676 Spore germination protein gerPA/gerPF HCN55_RS05855 PF10970 Spore germination protein GerPE HCN55_RS05865 PF10737 Spore germination protein GerPC HCN55_RS05870 PF10803 Spore germination GerPB HCN55_RS05875 PF10676 Spore germination protein gerPA/gerPF HCN55_RS05880 PF09388 Spo0E like sporulation regulatory protein HCN55_RS05885 PF08757 CotH kinase protein HCN55_RS05890 PF01557 Fumarylacetoacetate (FAA) hydrolase family HCN55_RS05895 PF07457 Protein of unknown function (DUF1516) HCN55_RS05900 PF00082 Subtilase family HCN55_RS05900 PF17936 Bacterial Ig domain HCN55_RS05905 PF10949 Protein of unknown function (DUF2777) HCN55_RS05910 PF00733 Asparagine synthase HCN55_RS05910 PF13537 Glutamine amidotransferase domain HCN55_RS05915 PF05163 DinB family HCN55_RS05925 PF01554 MatE HCN55_RS05930 PF12833 Helix-turn-helix domain HCN55_RS05930 PF02311 AraC-like ligand binding domain HCN55_RS05935 PF00356 Bacterial regulatory proteins, lacI family HCN55_RS05940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCN55_RS05940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCN55_RS05945 PF05163 DinB family HCN55_RS05950 PF01810 LysE type translocator HCN55_RS05955 PF00155 Aminotransferase class I and II HCN55_RS05955 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS05960 PF13599 Pentapeptide repeats (9 copies) HCN55_RS05965 PF00561 alpha/beta hydrolase fold HCN55_RS05965 PF08386 TAP-like protein HCN55_RS05975 PF01747 ATP-sulfurylase HCN55_RS05975 PF14306 PUA-like domain HCN55_RS05980 PF01507 Phosphoadenosine phosphosulfate reductase family HCN55_RS05985 PF04029 2-phosphosulpholactate phosphatase HCN55_RS05990 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) HCN55_RS05995 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HCN55_RS06000 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCN55_RS06000 PF13378 Enolase C-terminal domain-like HCN55_RS06005 PF07690 Major Facilitator Superfamily HCN55_RS06010 PF13673 Acetyltransferase (GNAT) domain HCN55_RS06010 PF18014 Acetyltransferase (GNAT) domain HCN55_RS06015 PF13673 Acetyltransferase (GNAT) domain HCN55_RS06020 PF02574 Homocysteine S-methyltransferase HCN55_RS06020 PF02219 Methylenetetrahydrofolate reductase HCN55_RS06025 PF04461 Protein of unknown function (DUF520) HCN55_RS06030 PF13509 S1 domain HCN55_RS06030 PF17783 CvfB-like winged helix domain HCN55_RS06045 PF17418 Sporulation delaying protein SdpA HCN55_RS06050 PF03551 Transcriptional regulator PadR-like family HCN55_RS06060 PF12650 Domain of unknown function (DUF3784) HCN55_RS06065 PF01447 Thermolysin metallopeptidase, catalytic domain HCN55_RS06065 PF02868 Thermolysin metallopeptidase, alpha-helical domain HCN55_RS06065 PF07504 Fungalysin/Thermolysin Propeptide Motif HCN55_RS06065 PF03413 Peptidase propeptide and YPEB domain HCN55_RS06070 PF02645 Uncharacterised protein, DegV family COG1307 HCN55_RS06075 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HCN55_RS06075 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HCN55_RS06080 PF12690 Intracellular proteinase inhibitor HCN55_RS06085 PF12758 Protein of unknown function (DUF3813) HCN55_RS06100 PF00326 Prolyl oligopeptidase family HCN55_RS06105 PF01883 Iron-sulfur cluster assembly protein HCN55_RS06115 PF01565 FAD binding domain HCN55_RS06120 PF07690 Major Facilitator Superfamily HCN55_RS06125 PF02774 Semialdehyde dehydrogenase, dimerisation domain HCN55_RS06125 PF01118 Semialdehyde dehydrogenase, NAD binding domain HCN55_RS06130 PF01960 ArgJ family HCN55_RS06135 PF00696 Amino acid kinase family HCN55_RS06140 PF00202 Aminotransferase class-III HCN55_RS06145 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HCN55_RS06145 PF00117 Glutamine amidotransferase class-I HCN55_RS06150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HCN55_RS06150 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HCN55_RS06155 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HCN55_RS06155 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HCN55_RS06160 PF14168 YjzC-like protein HCN55_RS06165 PF11151 Protein of unknown function (DUF2929) HCN55_RS06180 PF02608 ABC transporter substrate-binding protein PnrA-like HCN55_RS06185 PF10815 ComZ HCN55_RS06195 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HCN55_RS06195 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HCN55_RS06200 PF02801 Beta-ketoacyl synthase, C-terminal domain HCN55_RS06200 PF00109 Beta-ketoacyl synthase, N-terminal domain HCN55_RS06205 PF10026 Predicted Zn-dependent protease (DUF2268) HCN55_RS06210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCN55_RS06210 PF00005 ABC transporter HCN55_RS06215 PF00005 ABC transporter HCN55_RS06215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCN55_RS06225 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS06230 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS06230 PF12911 N-terminal TM domain of oligopeptide transport permease C HCN55_RS06235 PF12227 Protein of unknown function (DUF3603) HCN55_RS06240 PF00579 tRNA synthetases class I (W and Y) HCN55_RS06245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCN55_RS06250 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS06255 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS06255 PF12911 N-terminal TM domain of oligopeptide transport permease C HCN55_RS06260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCN55_RS06260 PF00005 ABC transporter HCN55_RS06265 PF00005 ABC transporter HCN55_RS06265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCN55_RS06270 PF07690 Major Facilitator Superfamily HCN55_RS06275 PF13508 Acetyltransferase (GNAT) domain HCN55_RS06280 PF03960 ArsC family HCN55_RS06285 PF03741 Integral membrane protein TerC family HCN55_RS06295 PF05389 Negative regulator of genetic competence (MecA) HCN55_RS06305 PF06054 Competence protein CoiA-like family HCN55_RS06310 PF01432 Peptidase family M3 HCN55_RS06310 PF08439 Oligopeptidase F HCN55_RS06325 PF01152 Bacterial-like globin HCN55_RS06330 PF01464 Transglycosylase SLT domain HCN55_RS06335 PF01928 CYTH domain HCN55_RS06345 PF04607 Region found in RelA / SpoT proteins HCN55_RS06350 PF01513 ATP-NAD kinase HCN55_RS06355 PF00849 RNA pseudouridylate synthase HCN55_RS06360 PF00149 Calcineurin-like phosphoesterase HCN55_RS06365 PF00999 Sodium/hydrogen exchanger family HCN55_RS06365 PF02254 TrkA-N domain HCN55_RS06365 PF02080 TrkA-C domain HCN55_RS06370 PF03070 TENA/THI-4/PQQC family HCN55_RS06375 PF02581 Thiamine monophosphate synthase HCN55_RS06380 PF01266 FAD dependent oxidoreductase HCN55_RS06385 PF02597 ThiS family HCN55_RS06390 PF05690 Thiazole biosynthesis protein ThiG HCN55_RS06395 PF00899 ThiF family HCN55_RS06400 PF08543 Phosphomethylpyrimidine kinase HCN55_RS06410 PF14153 Spore coat protein CotO HCN55_RS06415 PF10612 Spore coat protein Z HCN55_RS06420 PF10612 Spore coat protein Z HCN55_RS06425 PF07552 Spore Coat Protein X and V domain HCN55_RS06435 PF07552 Spore Coat Protein X and V domain HCN55_RS06440 PF07098 Protein of unknown function (DUF1360) HCN55_RS06455 PF14069 Stage VI sporulation protein F HCN55_RS06460 PF00580 UvrD/REP helicase N-terminal domain HCN55_RS06460 PF13361 UvrD-like helicase C-terminal domain HCN55_RS06470 PF13673 Acetyltransferase (GNAT) domain HCN55_RS06480 PF00756 Putative esterase HCN55_RS06485 PF01053 Cys/Met metabolism PLP-dependent enzyme HCN55_RS06490 PF01053 Cys/Met metabolism PLP-dependent enzyme HCN55_RS06495 PF13302 Acetyltransferase (GNAT) domain HCN55_RS06500 PF05684 Protein of unknown function (DUF819) HCN55_RS06510 PF12671 Putative amidase domain HCN55_RS06540 PF09639 YjcQ protein HCN55_RS06545 PF10668 Phage terminase small subunit HCN55_RS06550 PF03992 Antibiotic biosynthesis monooxygenase HCN55_RS06560 PF02368 Bacterial Ig-like domain (group 2) HCN55_RS06565 PF05043 Mga helix-turn-helix domain HCN55_RS06565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCN55_RS06565 PF08279 HTH domain HCN55_RS06565 PF00874 PRD domain HCN55_RS06570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCN55_RS06570 PF02378 Phosphotransferase system, EIIC HCN55_RS06570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCN55_RS06575 PF01238 Phosphomannose isomerase type I HCN55_RS06580 PF11208 Protein of unknown function (DUF2992) HCN55_RS06585 PF13302 Acetyltransferase (GNAT) domain HCN55_RS06595 PF04073 Aminoacyl-tRNA editing domain HCN55_RS06600 PF13783 Domain of unknown function (DUF4177) HCN55_RS06605 PF14154 Domain of unknown function (DUF4306) HCN55_RS06610 PF01040 UbiA prenyltransferase family HCN55_RS06620 PF13739 Deacetylase PdaC HCN55_RS06620 PF01522 Polysaccharide deacetylase HCN55_RS06620 PF11738 Protein of unknown function (DUF3298) HCN55_RS06625 PF10901 Protein of unknown function (DUF2690) HCN55_RS06630 PF14070 Putative motility protein HCN55_RS06635 PF10026 Predicted Zn-dependent protease (DUF2268) HCN55_RS06640 PF10990 Protein of unknown function (DUF2809) HCN55_RS06645 PF14172 Domain of unknown function (DUF4309) HCN55_RS06650 PF01568 Molydopterin dinucleotide binding domain HCN55_RS06650 PF00384 Molybdopterin oxidoreductase HCN55_RS06650 PF12838 4Fe-4S dicluster domain HCN55_RS06650 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HCN55_RS06650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCN55_RS06655 PF07849 Protein of unknown function (DUF1641) HCN55_RS06660 PF11611 Domain of unknown function (DUF4352) HCN55_RS06665 PF00293 NUDIX domain HCN55_RS06675 PF00067 Cytochrome P450 HCN55_RS06680 PF04101 Glycosyltransferase family 28 C-terminal domain HCN55_RS06690 PF02602 Uroporphyrinogen-III synthase HemD HCN55_RS06695 PF03649 Uncharacterised protein family (UPF0014) HCN55_RS06700 PF00005 ABC transporter HCN55_RS06705 PF13536 Putative multidrug resistance efflux transporter HCN55_RS06715 PF07849 Protein of unknown function (DUF1641) HCN55_RS06720 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_RS06725 PF02614 Glucuronate isomerase HCN55_RS06735 PF02615 Malate/L-lactate dehydrogenase HCN55_RS06740 PF00107 Zinc-binding dehydrogenase HCN55_RS06740 PF08240 Alcohol dehydrogenase GroES-like domain HCN55_RS06745 PF03786 D-mannonate dehydratase (UxuA) HCN55_RS06750 PF00106 short chain dehydrogenase HCN55_RS06755 PF07690 Major Facilitator Superfamily HCN55_RS06760 PF00356 Bacterial regulatory proteins, lacI family HCN55_RS06765 PF08125 Mannitol dehydrogenase C-terminal domain HCN55_RS06765 PF01232 Mannitol dehydrogenase Rossmann domain HCN55_RS06770 PF08666 SAF domain HCN55_RS06770 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HCN55_RS06775 PF01925 Sulfite exporter TauE/SafE HCN55_RS06780 PF05163 DinB family HCN55_RS06785 PF00004 ATPase family associated with various cellular activities (AAA) HCN55_RS06790 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_RS06800 PF03795 YCII-related domain HCN55_RS06805 PF01510 N-acetylmuramoyl-L-alanine amidase HCN55_RS06805 PF01476 LysM domain HCN55_RS06805 PF01471 Putative peptidoglycan binding domain HCN55_RS06810 PF08000 Bacterial PH domain HCN55_RS06815 PF05908 Poly-gamma-glutamate hydrolase HCN55_RS06820 PF05067 Manganese containing catalase HCN55_RS06825 PF06114 IrrE N-terminal-like domain HCN55_RS06830 PF01381 Helix-turn-helix HCN55_RS06845 PF01695 IstB-like ATP binding protein HCN55_RS06860 PF17356 Phage-like element PBSX protein XtrA HCN55_RS06865 PF08281 Sigma-70, region 4 HCN55_RS06870 PF10668 Phage terminase small subunit HCN55_RS06870 PF03592 Terminase small subunit HCN55_RS06875 PF04466 Phage terminase large subunit HCN55_RS06875 PF17288 Terminase RNAseH like domain HCN55_RS06880 PF04860 Phage portal protein HCN55_RS06885 PF14550 Putative phage serine protease XkdF HCN55_RS06890 PF05065 Phage capsid family HCN55_RS06895 PF11436 Protein of unknown function (DUF3199) HCN55_RS06900 PF12206 Domain of unknown function (DUF3599) HCN55_RS06905 PF04883 Bacteriophage HK97-gp10, putative tail-component HCN55_RS06920 PF17481 Phage tail sheath protein beta-sandwich domain HCN55_RS06920 PF17482 Phage tail sheath C-terminal domain HCN55_RS06920 PF04984 Phage tail sheath protein subtilisin-like domain HCN55_RS06925 PF09393 Phage tail tube protein HCN55_RS06930 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC HCN55_RS06940 PF01464 Transglycosylase SLT domain HCN55_RS06945 PF01476 LysM domain HCN55_RS06955 PF10844 Protein of unknown function (DUF2577) HCN55_RS06960 PF10934 Protein of unknown function (DUF2634) HCN55_RS06965 PF04865 Baseplate J-like protein HCN55_RS06970 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) HCN55_RS06985 PF09636 XkdW protein HCN55_RS06990 PF09693 Phage uncharacterised protein (Phage_XkdX) HCN55_RS07000 PF10779 Haemolysin XhlA HCN55_RS07005 PF04688 SPP1 phage holin HCN55_RS07010 PF01510 N-acetylmuramoyl-L-alanine amidase HCN55_RS07010 PF01471 Putative peptidoglycan binding domain HCN55_RS07010 PF01476 LysM domain HCN55_RS07020 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system HCN55_RS07025 PF14171 Toxin SpoIISA, type II toxin-antitoxin system HCN55_RS07030 PF01384 Phosphate transporter family HCN55_RS07035 PF01865 Protein of unknown function DUF47 HCN55_RS07040 PF13520 Amino acid permease HCN55_RS07045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_RS07055 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase HCN55_RS07060 PF00535 Glycosyl transferase family 2 HCN55_RS07070 PF13180 PDZ domain HCN55_RS07075 PF14748 Pyrroline-5-carboxylate reductase dimerisation HCN55_RS07075 PF03807 NADP oxidoreductase coenzyme F420-dependent HCN55_RS07080 PF04951 D-aminopeptidase HCN55_RS07085 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS07090 PF12911 N-terminal TM domain of oligopeptide transport permease C HCN55_RS07090 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS07095 PF00005 ABC transporter HCN55_RS07095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCN55_RS07100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HCN55_RS07105 PF02016 LD-carboxypeptidase N-terminal domain HCN55_RS07105 PF17676 LD-carboxypeptidase C-terminal domain HCN55_RS07110 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCN55_RS07110 PF13378 Enolase C-terminal domain-like HCN55_RS07115 PF00877 NlpC/P60 family HCN55_RS07120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HCN55_RS07120 PF00005 ABC transporter HCN55_RS07125 PF10282 Lactonase, 7-bladed beta-propeller HCN55_RS07135 PF03061 Thioesterase superfamily HCN55_RS07140 PF00970 Oxidoreductase FAD-binding domain HCN55_RS07140 PF00042 Globin HCN55_RS07140 PF00175 Oxidoreductase NAD-binding domain HCN55_RS07150 PF04239 Protein of unknown function (DUF421) HCN55_RS07155 PF12867 DinB superfamily HCN55_RS07160 PF13302 Acetyltransferase (GNAT) domain HCN55_RS07165 PF00893 Small Multidrug Resistance protein HCN55_RS07170 PF00893 Small Multidrug Resistance protein HCN55_RS07175 PF01842 ACT domain HCN55_RS07175 PF00551 Formyl transferase HCN55_RS07180 PF01472 PUA domain HCN55_RS07180 PF00696 Amino acid kinase family HCN55_RS07185 PF00171 Aldehyde dehydrogenase family HCN55_RS07190 PF02566 OsmC-like protein HCN55_RS07195 PF01047 MarR family HCN55_RS07200 PF02566 OsmC-like protein HCN55_RS07210 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HCN55_RS07215 PF08267 Cobalamin-independent synthase, N-terminal domain HCN55_RS07215 PF01717 Cobalamin-independent synthase, Catalytic domain HCN55_RS07220 PF00082 Subtilase family HCN55_RS07225 PF01740 STAS domain HCN55_RS07230 PF02361 Cobalt transport protein HCN55_RS07235 PF00005 ABC transporter HCN55_RS07240 PF09819 ABC-type cobalt transport system, permease component HCN55_RS07245 PF07615 YKOF-related Family HCN55_RS07250 PF00072 Response regulator receiver domain HCN55_RS07250 PF00486 Transcriptional regulatory protein, C terminal HCN55_RS07255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS07255 PF00512 His Kinase A (phospho-acceptor) domain HCN55_RS07255 PF00672 HAMP domain HCN55_RS07260 PF03413 Peptidase propeptide and YPEB domain HCN55_RS07265 PF03413 Peptidase propeptide and YPEB domain HCN55_RS07270 PF11132 Transcriptional regulator protein (SplA) HCN55_RS07275 PF01769 Divalent cation transporter HCN55_RS07275 PF00571 CBS domain HCN55_RS07275 PF03448 MgtE intracellular N domain HCN55_RS07280 PF13411 MerR HTH family regulatory protein HCN55_RS07295 PF01047 MarR family HCN55_RS07300 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase HCN55_RS07310 PF00149 Calcineurin-like phosphoesterase HCN55_RS07320 PF00535 Glycosyl transferase family 2 HCN55_RS07325 PF01068 ATP dependent DNA ligase domain HCN55_RS07330 PF02735 Ku70/Ku80 beta-barrel domain HCN55_RS07335 PF00563 EAL domain HCN55_RS07335 PF03707 Bacterial signalling protein N terminal repeat HCN55_RS07335 PF00990 Diguanylate cyclase, GGDEF domain HCN55_RS07340 PF09335 SNARE associated Golgi protein HCN55_RS07345 PF03741 Integral membrane protein TerC family HCN55_RS07350 PF04542 Sigma-70 region 2 HCN55_RS07355 PF12791 Anti-sigma factor N-terminus HCN55_RS07360 PF00269 Small, acid-soluble spore proteins, alpha/beta type HCN55_RS07365 PF08876 Domain of unknown function (DUF1836) HCN55_RS07370 PF01435 Peptidase family M48 HCN55_RS07375 PF02386 Cation transport protein HCN55_RS07390 PF01757 Acyltransferase family HCN55_RS07395 PF00989 PAS fold HCN55_RS07395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS07395 PF00512 His Kinase A (phospho-acceptor) domain HCN55_RS07395 PF13188 PAS domain HCN55_RS07395 PF13426 PAS domain HCN55_RS07400 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HCN55_RS07400 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HCN55_RS07410 PF01008 Initiation factor 2 subunit family HCN55_RS07415 PF01636 Phosphotransferase enzyme family HCN55_RS07420 PF00795 Carbon-nitrogen hydrolase HCN55_RS07425 PF00155 Aminotransferase class I and II HCN55_RS07430 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain HCN55_RS07430 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain HCN55_RS07440 PF00596 Class II Aldolase and Adducin N-terminal domain HCN55_RS07445 PF03079 ARD/ARD' family HCN55_RS07450 PF06803 Protein of unknown function (DUF1232) HCN55_RS07455 PF09388 Spo0E like sporulation regulatory protein HCN55_RS07465 PF00512 His Kinase A (phospho-acceptor) domain HCN55_RS07465 PF02743 Cache domain HCN55_RS07465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS07470 PF01047 MarR family HCN55_RS07475 PF13677 Membrane MotB of proton-channel complex MotA/MotB HCN55_RS07475 PF00691 OmpA family HCN55_RS07480 PF01618 MotA/TolQ/ExbB proton channel family HCN55_RS07485 PF00004 ATPase family associated with various cellular activities (AAA) HCN55_RS07485 PF07724 AAA domain (Cdc48 subfamily) HCN55_RS07485 PF17871 AAA lid domain HCN55_RS07485 PF10431 C-terminal, D2-small domain, of ClpB protein HCN55_RS07495 PF06508 Queuosine biosynthesis protein QueC HCN55_RS07500 PF01242 6-pyruvoyl tetrahydropterin synthase HCN55_RS07505 PF04055 Radical SAM superfamily HCN55_RS07510 PF14489 QueF-like protein HCN55_RS07515 PF01638 HxlR-like helix-turn-helix HCN55_RS07525 PF01476 LysM domain HCN55_RS07530 PF01476 LysM domain HCN55_RS07540 PF11514 Protein of unknown function (DUF3219) HCN55_RS07545 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) HCN55_RS07555 PF07486 Cell Wall Hydrolase HCN55_RS07560 PF01943 Polysaccharide biosynthesis protein HCN55_RS07565 PF00578 AhpC/TSA family HCN55_RS07580 PF01321 Creatinase/Prolidase N-terminal domain HCN55_RS07580 PF00557 Metallopeptidase family M24 HCN55_RS07585 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HCN55_RS07585 PF00356 Bacterial regulatory proteins, lacI family HCN55_RS07590 PF03123 CAT RNA binding domain HCN55_RS07590 PF00874 PRD domain HCN55_RS07595 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HCN55_RS07595 PF02378 Phosphotransferase system, EIIC HCN55_RS07595 PF00367 phosphotransferase system, EIIB HCN55_RS07600 PF00381 PTS HPr component phosphorylation site HCN55_RS07605 PF05524 PEP-utilising enzyme, N-terminal HCN55_RS07605 PF00391 PEP-utilising enzyme, mobile domain HCN55_RS07605 PF02896 PEP-utilising enzyme, TIM barrel domain HCN55_RS07610 PF11132 Transcriptional regulator protein (SplA) HCN55_RS07620 PF00583 Acetyltransferase (GNAT) family HCN55_RS07625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_RS07625 PF02743 Cache domain HCN55_RS07625 PF00672 HAMP domain HCN55_RS07630 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCN55_RS07630 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HCN55_RS07635 PF00188 Cysteine-rich secretory protein family HCN55_RS07640 PF00905 Penicillin binding protein transpeptidase domain HCN55_RS07640 PF03717 Penicillin-binding Protein dimerisation domain HCN55_RS07645 PF00512 His Kinase A (phospho-acceptor) domain HCN55_RS07645 PF00989 PAS fold HCN55_RS07645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS07645 PF08447 PAS fold HCN55_RS07650 PF00155 Aminotransferase class I and II HCN55_RS07660 PF00072 Response regulator receiver domain HCN55_RS07660 PF01584 CheW-like domain HCN55_RS07665 PF14177 YkyB-like protein HCN55_RS07670 PF07690 Major Facilitator Superfamily HCN55_RS07675 PF01476 LysM domain HCN55_RS07675 PF03734 L,D-transpeptidase catalytic domain HCN55_RS07680 PF00149 Calcineurin-like phosphoesterase HCN55_RS07680 PF10518 TAT (twin-arginine translocation) pathway signal sequence HCN55_RS07690 PF01471 Putative peptidoglycan binding domain HCN55_RS07690 PF08924 Domain of unknown function (DUF1906) HCN55_RS07705 PF10388 EAL-domain associated signalling protein domain HCN55_RS07705 PF00563 EAL domain HCN55_RS07710 PF08796 Protein of unknown function (DUF1797) HCN55_RS07715 PF04308 Ribonuclease H-like HCN55_RS07720 PF14156 Antirepressor AbbA HCN55_RS07730 PF03466 LysR substrate binding domain HCN55_RS07730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS07735 PF00258 Flavodoxin HCN55_RS07745 PF00258 Flavodoxin HCN55_RS07750 PF14602 Hexapeptide repeat of succinyl-transferase HCN55_RS07750 PF00132 Bacterial transferase hexapeptide (six repeats) HCN55_RS07750 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal HCN55_RS07755 PF07687 Peptidase dimerisation domain HCN55_RS07755 PF01546 Peptidase family M20/M25/M40 HCN55_RS07760 PF03698 Uncharacterised protein family (UPF0180) HCN55_RS07765 PF00924 Mechanosensitive ion channel HCN55_RS07770 PF10417 C-terminal domain of 1-Cys peroxiredoxin HCN55_RS07770 PF00578 AhpC/TSA family HCN55_RS07775 PF00578 AhpC/TSA family HCN55_RS07790 PF12804 MobA-like NTP transferase domain HCN55_RS07795 PF00899 ThiF family HCN55_RS07800 PF00994 Probable molybdopterin binding domain HCN55_RS07800 PF03454 MoeA C-terminal region (domain IV) HCN55_RS07800 PF03453 MoeA N-terminal region (domain I and II) HCN55_RS07805 PF03205 Molybdopterin guanine dinucleotide synthesis protein B HCN55_RS07810 PF02391 MoaE protein HCN55_RS07815 PF02597 ThiS family HCN55_RS07820 PF00664 ABC transporter transmembrane region HCN55_RS07820 PF00005 ABC transporter HCN55_RS07825 PF00005 ABC transporter HCN55_RS07825 PF00664 ABC transporter transmembrane region HCN55_RS07830 PF04893 Yip1 domain HCN55_RS07835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCN55_RS07840 PF00005 ABC transporter HCN55_RS07845 PF02687 FtsX-like permease family HCN55_RS07845 PF12704 MacB-like periplasmic core domain HCN55_RS07850 PF00455 DeoR C terminal sensor domain HCN55_RS07850 PF08220 DeoR-like helix-turn-helix domain HCN55_RS07855 PF00294 pfkB family carbohydrate kinase HCN55_RS07860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCN55_RS07860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCN55_RS07865 PF10502 Signal peptidase, peptidase S26 HCN55_RS07875 PF00005 ABC transporter HCN55_RS07875 PF12848 ABC transporter HCN55_RS07880 PF02558 Ketopantoate reductase PanE/ApbA HCN55_RS07880 PF08546 Ketopantoate reductase PanE/ApbA C terminal HCN55_RS07885 PF02073 Thermophilic metalloprotease (M29) HCN55_RS07890 PF17447 Uncharacterized YkpC-like HCN55_RS07900 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HCN55_RS07900 PF18277 AbrB C-terminal domain HCN55_RS07905 PF00989 PAS fold HCN55_RS07905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS07905 PF00512 His Kinase A (phospho-acceptor) domain HCN55_RS07910 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like HCN55_RS07915 PF02080 TrkA-C domain HCN55_RS07915 PF02254 TrkA-N domain HCN55_RS07920 PF01979 Amidohydrolase family HCN55_RS07920 PF13382 Adenine deaminase C-terminal domain HCN55_RS07925 PF00753 Metallo-beta-lactamase superfamily HCN55_RS07925 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HCN55_RS07925 PF17770 Ribonuclease J C-terminal domain HCN55_RS07940 PF01327 Polypeptide deformylase HCN55_RS07950 PF10368 Putative cell-wall binding lipoprotein HCN55_RS07955 PF00676 Dehydrogenase E1 component HCN55_RS07960 PF02780 Transketolase, C-terminal domain HCN55_RS07960 PF02779 Transketolase, pyrimidine binding domain HCN55_RS07965 PF00364 Biotin-requiring enzyme HCN55_RS07965 PF02817 e3 binding domain HCN55_RS07965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HCN55_RS07970 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_RS07970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HCN55_RS07980 PF13790 SR1 protein HCN55_RS07985 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HCN55_RS07985 PF01276 Orn/Lys/Arg decarboxylase, major domain HCN55_RS07990 PF05256 Uncharacterised protein family (UPF0223) HCN55_RS07995 PF06335 Protein of unknown function (DUF1054) HCN55_RS08005 PF00459 Inositol monophosphatase family HCN55_RS08010 PF00583 Acetyltransferase (GNAT) family HCN55_RS08015 PF04072 Leucine carboxyl methyltransferase HCN55_RS08020 PF01447 Thermolysin metallopeptidase, catalytic domain HCN55_RS08020 PF02868 Thermolysin metallopeptidase, alpha-helical domain HCN55_RS08020 PF03413 Peptidase propeptide and YPEB domain HCN55_RS08020 PF07504 Fungalysin/Thermolysin Propeptide Motif HCN55_RS08035 PF08281 Sigma-70, region 4 HCN55_RS08035 PF04542 Sigma-70 region 2 HCN55_RS08040 PF13490 Putative zinc-finger HCN55_RS08050 PF17259 Family of unknown function (DUF5325) HCN55_RS08060 PF14036 YlaH-like protein HCN55_RS08065 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) HCN55_RS08070 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) HCN55_RS08075 PF02562 PhoH-like protein HCN55_RS08075 PF13638 PIN domain HCN55_RS08085 PF04960 Glutaminase HCN55_RS08090 PF07408 Protein of unknown function (DUF1507) HCN55_RS08095 PF01098 Cell cycle protein HCN55_RS08100 PF00364 Biotin-requiring enzyme HCN55_RS08100 PF02436 Conserved carboxylase domain HCN55_RS08100 PF00682 HMGL-like HCN55_RS08100 PF02785 Biotin carboxylase C-terminal domain HCN55_RS08100 PF00289 Biotin carboxylase, N-terminal domain HCN55_RS08100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HCN55_RS08105 PF02628 Cytochrome oxidase assembly protein HCN55_RS08110 PF01040 UbiA prenyltransferase family HCN55_RS08115 PF00034 Cytochrome c HCN55_RS08115 PF02790 Cytochrome C oxidase subunit II, transmembrane domain HCN55_RS08115 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HCN55_RS08120 PF00115 Cytochrome C and Quinol oxidase polypeptide I HCN55_RS08125 PF00510 Cytochrome c oxidase subunit III HCN55_RS08130 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HCN55_RS08135 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) HCN55_RS08140 PF08868 YugN-like family HCN55_RS08145 PF00571 CBS domain HCN55_RS08150 PF00188 Cysteine-rich secretory protein family HCN55_RS08150 PF14504 CAP-associated N-terminal HCN55_RS08155 PF14071 Putative coat protein HCN55_RS08160 PF14003 YlbE-like protein HCN55_RS08165 PF06133 Control of competence regulator ComK, YlbF/YmcA HCN55_RS08170 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) HCN55_RS08180 PF01467 Cytidylyltransferase-like HCN55_RS08185 PF07670 Nucleoside recognition HCN55_RS08190 PF01734 Patatin-like phospholipase HCN55_RS08195 PF05362 Lon protease (S16) C-terminal proteolytic domain HCN55_RS08195 PF13180 PDZ domain HCN55_RS08200 PF05636 HIGH Nucleotidyl Transferase HCN55_RS08210 PF02620 Large ribosomal RNA subunit accumulation protein YceD HCN55_RS08215 PF01783 Ribosomal L32p protein family HCN55_RS08225 PF00583 Acetyltransferase (GNAT) family HCN55_RS08230 PF08546 Ketopantoate reductase PanE/ApbA C terminal HCN55_RS08230 PF02558 Ketopantoate reductase PanE/ApbA HCN55_RS08235 PF10079 Bacillithiol biosynthesis BshC HCN55_RS08240 PF02381 MraZ protein, putative antitoxin-like HCN55_RS08245 PF01795 MraW methylase family HCN55_RS08260 PF03717 Penicillin-binding Protein dimerisation domain HCN55_RS08260 PF03793 PASTA domain HCN55_RS08260 PF00905 Penicillin binding protein transpeptidase domain HCN55_RS08265 PF08245 Mur ligase middle domain HCN55_RS08265 PF02875 Mur ligase family, glutamate ligase domain HCN55_RS08265 PF01225 Mur ligase family, catalytic domain HCN55_RS08270 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HCN55_RS08270 PF00953 Glycosyl transferase family 4 HCN55_RS08275 PF02875 Mur ligase family, glutamate ligase domain HCN55_RS08275 PF08245 Mur ligase middle domain HCN55_RS08280 PF01098 Cell cycle protein HCN55_RS08285 PF03033 Glycosyltransferase family 28 N-terminal domain HCN55_RS08285 PF04101 Glycosyltransferase family 28 C-terminal domain HCN55_RS08290 PF01565 FAD binding domain HCN55_RS08290 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HCN55_RS08295 PF08478 POTRA domain, FtsQ-type HCN55_RS08300 PF05949 Bacterial protein of unknown function (DUF881) HCN55_RS08305 PF05949 Bacterial protein of unknown function (DUF881) HCN55_RS08310 PF06947 Protein of unknown function (DUF1290) HCN55_RS08315 PF02491 SHS2 domain inserted in FTSA HCN55_RS08320 PF00091 Tubulin/FtsZ family, GTPase domain HCN55_RS08320 PF12327 FtsZ family, C-terminal domain HCN55_RS08325 PF05922 Peptidase inhibitor I9 HCN55_RS08325 PF00082 Subtilase family HCN55_RS08330 PF03419 Sporulation factor SpoIIGA HCN55_RS08335 PF04545 Sigma-70, region 4 HCN55_RS08335 PF04542 Sigma-70 region 2 HCN55_RS08340 PF04542 Sigma-70 region 2 HCN55_RS08340 PF04539 Sigma-70 region 3 HCN55_RS08340 PF04545 Sigma-70, region 4 HCN55_RS08345 PF00005 ABC transporter HCN55_RS08350 PF01546 Peptidase family M20/M25/M40 HCN55_RS08350 PF07687 Peptidase dimerisation domain HCN55_RS08355 PF05239 PRC-barrel domain HCN55_RS08365 PF01168 Alanine racemase, N-terminal domain HCN55_RS08370 PF04472 Cell division protein SepF HCN55_RS08375 PF02325 YGGT family HCN55_RS08380 PF01479 S4 domain HCN55_RS08380 PF17774 Putative RNA-binding domain in YlmH HCN55_RS08385 PF05103 DivIVA protein HCN55_RS08390 PF00133 tRNA synthetases class I (I, L, M and V) HCN55_RS08390 PF08264 Anticodon-binding domain of tRNA HCN55_RS08395 PF01258 Prokaryotic dksA/traR C4-type zinc finger HCN55_RS08400 PF01252 Signal peptidase (SPase) II HCN55_RS08405 PF00849 RNA pseudouridylate synthase HCN55_RS08405 PF01479 S4 domain HCN55_RS08410 PF00156 Phosphoribosyl transferase domain HCN55_RS08415 PF00860 Permease family HCN55_RS08420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HCN55_RS08420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HCN55_RS08425 PF01979 Amidohydrolase family HCN55_RS08430 PF00117 Glutamine amidotransferase class-I HCN55_RS08430 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HCN55_RS08435 PF02142 MGS-like domain HCN55_RS08435 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HCN55_RS08435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HCN55_RS08440 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HCN55_RS08440 PF00175 Oxidoreductase NAD-binding domain HCN55_RS08445 PF01180 Dihydroorotate dehydrogenase HCN55_RS08450 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HCN55_RS08455 PF00156 Phosphoribosyl transferase domain HCN55_RS08460 PF01507 Phosphoadenosine phosphosulfate reductase family HCN55_RS08465 PF01384 Phosphate transporter family HCN55_RS08470 PF01747 ATP-sulfurylase HCN55_RS08470 PF14306 PUA-like domain HCN55_RS08480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HCN55_RS08485 PF01903 CbiX HCN55_RS08495 PF05670 NFACT protein RNA binding domain HCN55_RS08500 PF00689 Cation transporting ATPase, C-terminus HCN55_RS08500 PF00690 Cation transporter/ATPase, N-terminus HCN55_RS08505 PF03755 YicC-like family, N-terminal region HCN55_RS08505 PF08340 Domain of unknown function (DUF1732) HCN55_RS08510 PF04025 Domain of unknown function (DUF370) HCN55_RS08515 PF00625 Guanylate kinase HCN55_RS08520 PF01192 RNA polymerase Rpb6 HCN55_RS08525 PF04127 DNA / pantothenate metabolism flavoprotein HCN55_RS08525 PF02441 Flavoprotein HCN55_RS08530 PF00271 Helicase conserved C-terminal domain HCN55_RS08530 PF17764 3′ DNA-binding domain (3′BD) HCN55_RS08530 PF18074 Primosomal protein N C-terminal domain HCN55_RS08530 PF04851 Type III restriction enzyme, res subunit HCN55_RS08530 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HCN55_RS08535 PF01327 Polypeptide deformylase HCN55_RS08540 PF00551 Formyl transferase HCN55_RS08540 PF02911 Formyl transferase, C-terminal domain HCN55_RS08545 PF01029 NusB family HCN55_RS08545 PF01189 16S rRNA methyltransferase RsmB/F HCN55_RS08550 PF04055 Radical SAM superfamily HCN55_RS08560 PF03793 PASTA domain HCN55_RS08560 PF00069 Protein kinase domain HCN55_RS08565 PF16745 RsgA N-terminal domain HCN55_RS08565 PF03193 RsgA GTPase HCN55_RS08570 PF00834 Ribulose-phosphate 3 epimerase family HCN55_RS08575 PF04263 Thiamin pyrophosphokinase, catalytic domain HCN55_RS08575 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain HCN55_RS08580 PF08183 Stage V sporulation protein family HCN55_RS08585 PF00830 Ribosomal L28 family HCN55_RS08590 PF03780 Asp23 family, cell envelope-related function HCN55_RS08595 PF13684 Dihydroxyacetone kinase family HCN55_RS08595 PF02734 DAK2 domain HCN55_RS08600 PF01842 ACT domain HCN55_RS08600 PF03315 Serine dehydratase beta chain HCN55_RS08605 PF03313 Serine dehydratase alpha chain HCN55_RS08610 PF00271 Helicase conserved C-terminal domain HCN55_RS08610 PF17191 RecG wedge domain HCN55_RS08610 PF00270 DEAD/DEAH box helicase HCN55_RS08615 PF03061 Thioesterase superfamily HCN55_RS08620 PF02504 Fatty acid synthesis protein HCN55_RS08625 PF00698 Acyl transferase domain HCN55_RS08635 PF00550 Phosphopantetheine attachment site HCN55_RS08640 PF00035 Double-stranded RNA binding motif HCN55_RS08640 PF14622 Ribonuclease-III-like HCN55_RS08645 PF06470 SMC proteins Flexible Hinge Domain HCN55_RS08645 PF02463 RecF/RecN/SMC N terminal domain HCN55_RS08650 PF00448 SRP54-type protein, GTPase domain HCN55_RS08650 PF02881 SRP54-type protein, helical bundle domain HCN55_RS08655 PF02369 Bacterial Ig-like domain (group 1) HCN55_RS08660 PF04297 Putative helix-turn-helix protein, YlxM / p13 like HCN55_RS08665 PF02978 Signal peptide binding domain HCN55_RS08665 PF02881 SRP54-type protein, helical bundle domain HCN55_RS08665 PF00448 SRP54-type protein, GTPase domain HCN55_RS08670 PF00886 Ribosomal protein S16 HCN55_RS08680 PF11068 YlqD protein HCN55_RS08685 PF05239 PRC-barrel domain HCN55_RS08685 PF01782 RimM N-terminal domain HCN55_RS08690 PF01746 tRNA (Guanine-1)-methyltransferase HCN55_RS08695 PF01245 Ribosomal protein L19 HCN55_RS08700 PF01926 50S ribosome-binding GTPase HCN55_RS08705 PF01351 Ribonuclease HII HCN55_RS08715 PF01312 FlhB HrpN YscU SpaS Family HCN55_RS08720 PF08442 ATP-grasp domain HCN55_RS08720 PF00549 CoA-ligase HCN55_RS08725 PF02629 CoA binding domain HCN55_RS08725 PF00549 CoA-ligase HCN55_RS08730 PF02481 DNA recombination-mediator protein A HCN55_RS08735 PF01751 Toprim domain HCN55_RS08735 PF01396 Topoisomerase DNA binding C4 zinc finger HCN55_RS08735 PF01131 DNA topoisomerase HCN55_RS08740 PF01134 Glucose inhibited division protein A HCN55_RS08745 PF02899 Phage integrase, N-terminal SAM-like domain HCN55_RS08745 PF00589 Phage integrase family HCN55_RS08750 PF00227 Proteasome subunit HCN55_RS08755 PF10431 C-terminal, D2-small domain, of ClpB protein HCN55_RS08755 PF00004 ATPase family associated with various cellular activities (AAA) HCN55_RS08755 PF07724 AAA domain (Cdc48 subfamily) HCN55_RS08760 PF08222 CodY helix-turn-helix domain HCN55_RS08760 PF06018 CodY GAF-like domain HCN55_RS08765 PF00460 Flagella basal body rod protein HCN55_RS08770 PF00460 Flagella basal body rod protein HCN55_RS08770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HCN55_RS08775 PF02049 Flagellar hook-basal body complex protein FliE HCN55_RS08780 PF01514 Secretory protein of YscJ/FliF family HCN55_RS08780 PF08345 Flagellar M-ring protein C-terminal HCN55_RS08785 PF01706 FliG C-terminal domain HCN55_RS08785 PF14841 FliG middle domain HCN55_RS08785 PF14842 FliG N-terminal domain HCN55_RS08790 PF02108 Flagellar assembly protein FliH HCN55_RS08795 PF02874 ATP synthase alpha/beta family, beta-barrel domain HCN55_RS08795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HCN55_RS08795 PF18269 T3SS EscN ATPase C-terminal domain HCN55_RS08800 PF02050 Flagellar FliJ protein HCN55_RS08805 PF03448 MgtE intracellular N domain HCN55_RS08810 PF02120 Flagellar hook-length control protein FliK HCN55_RS08815 PF03963 Flagellar hook capping protein - N-terminal region HCN55_RS08820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HCN55_RS08820 PF00460 Flagella basal body rod protein HCN55_RS08825 PF06289 Flagellar and Swarming motility proteins HCN55_RS08830 PF03748 Flagellar basal body-associated protein FliL HCN55_RS08835 PF02154 Flagellar motor switch protein FliM HCN55_RS08835 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HCN55_RS08840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HCN55_RS08840 PF04509 CheC-like family HCN55_RS08845 PF00072 Response regulator receiver domain HCN55_RS08850 PF04347 Flagellar biosynthesis protein, FliO HCN55_RS08855 PF00813 FliP family HCN55_RS08860 PF01313 Bacterial export proteins, family 3 HCN55_RS08865 PF01311 Bacterial export proteins, family 1 HCN55_RS08870 PF01312 FlhB HrpN YscU SpaS Family HCN55_RS08875 PF00771 FHIPEP family HCN55_RS08880 PF00448 SRP54-type protein, GTPase domain HCN55_RS08885 PF10609 NUBPL iron-transfer P-loop NTPase HCN55_RS08890 PF00072 Response regulator receiver domain HCN55_RS08890 PF01339 CheB methylesterase HCN55_RS08895 PF01584 CheW-like domain HCN55_RS08895 PF07194 P2 response regulator binding domain HCN55_RS08895 PF01627 Hpt domain HCN55_RS08895 PF02895 Signal transducing histidine kinase, homodimeric domain HCN55_RS08895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS08900 PF01584 CheW-like domain HCN55_RS08905 PF04509 CheC-like family HCN55_RS08910 PF03975 CheD chemotactic sensory transduction HCN55_RS08915 PF04545 Sigma-70, region 4 HCN55_RS08915 PF04542 Sigma-70 region 2 HCN55_RS08915 PF04539 Sigma-70 region 3 HCN55_RS08925 PF00318 Ribosomal protein S2 HCN55_RS08930 PF00889 Elongation factor TS HCN55_RS08935 PF00696 Amino acid kinase family HCN55_RS08940 PF01765 Ribosome recycling factor HCN55_RS08945 PF01255 Putative undecaprenyl diphosphate synthase HCN55_RS08955 PF13288 DXP reductoisomerase C-terminal domain HCN55_RS08955 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HCN55_RS08955 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HCN55_RS08960 PF02163 Peptidase family M50 HCN55_RS08960 PF17820 PDZ domain HCN55_RS08965 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HCN55_RS08965 PF04073 Aminoacyl-tRNA editing domain HCN55_RS08965 PF03129 Anticodon binding domain HCN55_RS08970 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HCN55_RS08970 PF14480 DNA polymerase III polC-type N-terminus I HCN55_RS08970 PF11490 DNA polymerase III polC-type N-terminus II HCN55_RS08970 PF02811 PHP domain HCN55_RS08970 PF14579 Helix-hairpin-helix motif HCN55_RS08970 PF00929 Exonuclease HCN55_RS08970 PF07733 Bacterial DNA polymerase III alpha NTPase domain HCN55_RS08975 PF02576 RimP N-terminal domain HCN55_RS08975 PF17384 RimP C-terminal SH3 domain HCN55_RS08980 PF00575 S1 RNA binding domain HCN55_RS08980 PF13184 NusA-like KH domain HCN55_RS08980 PF08529 NusA N-terminal domain HCN55_RS08985 PF04296 Protein of unknown function (DUF448) HCN55_RS08990 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family HCN55_RS08995 PF00009 Elongation factor Tu GTP binding domain HCN55_RS08995 PF11987 Translation-initiation factor 2 HCN55_RS08995 PF04760 Translation initiation factor IF-2, N-terminal region HCN55_RS09000 PF04456 Protein of unknown function (DUF503) HCN55_RS09005 PF02033 Ribosome-binding factor A HCN55_RS09010 PF16198 tRNA pseudouridylate synthase B C-terminal domain HCN55_RS09010 PF01509 TruB family pseudouridylate synthase (N terminal domain) HCN55_RS09015 PF06574 FAD synthetase HCN55_RS09015 PF01687 Riboflavin kinase HCN55_RS09020 PF00312 Ribosomal protein S15 HCN55_RS09025 PF00575 S1 RNA binding domain HCN55_RS09025 PF03725 3' exoribonuclease family, domain 2 HCN55_RS09025 PF01138 3' exoribonuclease family, domain 1 HCN55_RS09025 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HCN55_RS09025 PF00013 KH domain HCN55_RS09030 PF01522 Polysaccharide deacetylase HCN55_RS09035 PF05193 Peptidase M16 inactive domain HCN55_RS09035 PF00675 Insulinase (Peptidase family M16) HCN55_RS09040 PF05239 PRC-barrel domain HCN55_RS09045 PF16924 Dipicolinate synthase subunit A N-terminal domain HCN55_RS09045 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HCN55_RS09050 PF02441 Flavoprotein HCN55_RS09055 PF01118 Semialdehyde dehydrogenase, NAD binding domain HCN55_RS09055 PF02774 Semialdehyde dehydrogenase, dimerisation domain HCN55_RS09060 PF00696 Amino acid kinase family HCN55_RS09060 PF13840 ACT domain HCN55_RS09065 PF00701 Dihydrodipicolinate synthetase family HCN55_RS09070 PF17770 Ribonuclease J C-terminal domain HCN55_RS09070 PF00753 Metallo-beta-lactamase superfamily HCN55_RS09070 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HCN55_RS09075 PF00574 Clp protease HCN55_RS09080 PF14035 YlzJ-like protein HCN55_RS09085 PF01580 FtsK/SpoIIIE family HCN55_RS09085 PF09397 Ftsk gamma domain HCN55_RS09085 PF17854 FtsK alpha domain HCN55_RS09090 PF07702 UTRA domain HCN55_RS09090 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS09095 PF07690 Major Facilitator Superfamily HCN55_RS09100 PF05193 Peptidase M16 inactive domain HCN55_RS09105 PF05193 Peptidase M16 inactive domain HCN55_RS09105 PF00675 Insulinase (Peptidase family M16) HCN55_RS09115 PF11588 Protein of unknown function (DUF3243) HCN55_RS09125 PF13464 Domain of unknown function (DUF4115) HCN55_RS09130 PF01066 CDP-alcohol phosphatidyltransferase HCN55_RS09135 PF18146 Damage-inducible protein CinA KH domain HCN55_RS09135 PF02464 Competence-damaged protein HCN55_RS09135 PF00994 Probable molybdopterin binding domain HCN55_RS09140 PF00154 recA bacterial DNA recombination protein HCN55_RS09145 PF00144 Beta-lactamase HCN55_RS09150 PF01966 HD domain HCN55_RS09150 PF00013 KH domain HCN55_RS09150 PF12072 Domain of unknown function (DUF3552) HCN55_RS09155 PF13277 YmdB-like protein HCN55_RS09160 PF04232 Stage V sporulation protein S (SpoVS) HCN55_RS09165 PF08240 Alcohol dehydrogenase GroES-like domain HCN55_RS09165 PF00107 Zinc-binding dehydrogenase HCN55_RS09170 PF00155 Aminotransferase class I and II HCN55_RS09175 PF00919 Uncharacterized protein family UPF0004 HCN55_RS09175 PF04055 Radical SAM superfamily HCN55_RS09175 PF01938 TRAM domain HCN55_RS09180 PF06133 Control of competence regulator ComK, YlbF/YmcA HCN55_RS09185 PF10628 Outer spore coat protein E (CotE) HCN55_RS09190 PF00488 MutS domain V HCN55_RS09190 PF05190 MutS family domain IV HCN55_RS09190 PF05192 MutS domain III HCN55_RS09190 PF05188 MutS domain II HCN55_RS09190 PF01624 MutS domain I HCN55_RS09195 PF01119 DNA mismatch repair protein, C-terminal domain HCN55_RS09195 PF08676 MutL C terminal dimerisation domain HCN55_RS09200 PF14184 Regulatory protein YrvL HCN55_RS09210 PF13977 BetI-type transcriptional repressor, C-terminal HCN55_RS09210 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS09215 PF00753 Metallo-beta-lactamase superfamily HCN55_RS09225 PF00698 Acyl transferase domain HCN55_RS09230 PF00698 Acyl transferase domain HCN55_RS09235 PF03060 Nitronate monooxygenase HCN55_RS09235 PF00698 Acyl transferase domain HCN55_RS09240 PF00550 Phosphopantetheine attachment site HCN55_RS09245 PF02801 Beta-ketoacyl synthase, C-terminal domain HCN55_RS09245 PF00109 Beta-ketoacyl synthase, N-terminal domain HCN55_RS09250 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal HCN55_RS09250 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal HCN55_RS09255 PF00378 Enoyl-CoA hydratase/isomerase HCN55_RS09260 PF00378 Enoyl-CoA hydratase/isomerase HCN55_RS09265 PF08659 KR domain HCN55_RS09265 PF00550 Phosphopantetheine attachment site HCN55_RS09265 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS09265 PF00668 Condensation domain HCN55_RS09265 PF16197 Ketoacyl-synthetase C-terminal extension HCN55_RS09265 PF00109 Beta-ketoacyl synthase, N-terminal domain HCN55_RS09265 PF02801 Beta-ketoacyl synthase, C-terminal domain HCN55_RS09265 PF00501 AMP-binding enzyme HCN55_RS09265 PF14765 Polyketide synthase dehydratase HCN55_RS09270 PF00550 Phosphopantetheine attachment site HCN55_RS09270 PF00109 Beta-ketoacyl synthase, N-terminal domain HCN55_RS09270 PF02801 Beta-ketoacyl synthase, C-terminal domain HCN55_RS09270 PF16197 Ketoacyl-synthetase C-terminal extension HCN55_RS09270 PF08659 KR domain HCN55_RS09270 PF14765 Polyketide synthase dehydratase HCN55_RS09275 PF16197 Ketoacyl-synthetase C-terminal extension HCN55_RS09275 PF00109 Beta-ketoacyl synthase, N-terminal domain HCN55_RS09275 PF02801 Beta-ketoacyl synthase, C-terminal domain HCN55_RS09275 PF08659 KR domain HCN55_RS09275 PF00550 Phosphopantetheine attachment site HCN55_RS09275 PF08242 Methyltransferase domain HCN55_RS09275 PF14765 Polyketide synthase dehydratase HCN55_RS09280 PF02801 Beta-ketoacyl synthase, C-terminal domain HCN55_RS09280 PF00109 Beta-ketoacyl synthase, N-terminal domain HCN55_RS09280 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS09280 PF08659 KR domain HCN55_RS09280 PF00668 Condensation domain HCN55_RS09280 PF00550 Phosphopantetheine attachment site HCN55_RS09280 PF14765 Polyketide synthase dehydratase HCN55_RS09280 PF16197 Ketoacyl-synthetase C-terminal extension HCN55_RS09280 PF00501 AMP-binding enzyme HCN55_RS09285 PF16197 Ketoacyl-synthetase C-terminal extension HCN55_RS09285 PF14765 Polyketide synthase dehydratase HCN55_RS09285 PF00550 Phosphopantetheine attachment site HCN55_RS09285 PF08242 Methyltransferase domain HCN55_RS09285 PF02801 Beta-ketoacyl synthase, C-terminal domain HCN55_RS09285 PF00975 Thioesterase domain HCN55_RS09285 PF00109 Beta-ketoacyl synthase, N-terminal domain HCN55_RS09290 PF00067 Cytochrome P450 HCN55_RS09305 PF00082 Subtilase family HCN55_RS09310 PF05908 Poly-gamma-glutamate hydrolase HCN55_RS09315 PF02566 OsmC-like protein HCN55_RS09320 PF00893 Small Multidrug Resistance protein HCN55_RS09325 PF00893 Small Multidrug Resistance protein HCN55_RS09335 PF12788 YmaF family HCN55_RS09345 PF17209 Hfq protein HCN55_RS09350 PF14157 YmzC-like protein HCN55_RS09360 PF07972 NrdI Flavodoxin like HCN55_RS09365 PF08343 Ribonucleotide reductase N-terminal HCN55_RS09365 PF00317 Ribonucleotide reductase, all-alpha domain HCN55_RS09365 PF02867 Ribonucleotide reductase, barrel domain HCN55_RS09370 PF00268 Ribonucleotide reductase, small chain HCN55_RS09380 PF01520 N-acetylmuramoyl-L-alanine amidase HCN55_RS09380 PF05036 Sporulation related domain HCN55_RS09385 PF17866 AAA lid domain HCN55_RS09385 PF00004 ATPase family associated with various cellular activities (AAA) HCN55_RS09390 PF13167 GTP-binding GTPase N-terminal HCN55_RS09390 PF16360 GTP-binding GTPase Middle Region HCN55_RS09390 PF01926 50S ribosome-binding GTPase HCN55_RS09395 PF06838 Methionine gamma-lyase HCN55_RS09400 PF13411 MerR HTH family regulatory protein HCN55_RS09405 PF00120 Glutamine synthetase, catalytic domain HCN55_RS09405 PF03951 Glutamine synthetase, beta-Grasp domain HCN55_RS09435 PF13302 Acetyltransferase (GNAT) domain HCN55_RS09445 PF13021 Domain of unknown function (DUF3885) HCN55_RS09475 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain HCN55_RS09475 PF04616 Glycosyl hydrolases family 43 HCN55_RS09480 PF00480 ROK family HCN55_RS09485 PF01261 Xylose isomerase-like TIM barrel HCN55_RS09490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCN55_RS09490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCN55_RS09500 PF00565 Staphylococcal nuclease homologue HCN55_RS09505 PF00083 Sugar (and other) transporter HCN55_RS09510 PF01168 Alanine racemase, N-terminal domain HCN55_RS09510 PF00842 Alanine racemase, C-terminal domain HCN55_RS09515 PF10903 Protein of unknown function (DUF2691) HCN55_RS09520 PF00692 dUTPase HCN55_RS09535 PF00303 Thymidylate synthase HCN55_RS09545 PF15493 Domain of unknown function, YrpD HCN55_RS09550 PF14037 YoqO-like protein HCN55_RS09575 PF08327 Activator of Hsp90 ATPase homolog 1-like protein HCN55_RS09585 PF03323 Bacillus/Clostridium GerA spore germination protein HCN55_RS09590 PF03845 Spore germination protein HCN55_RS09595 PF05504 Spore germination B3/ GerAC like, C-terminal HCN55_RS09605 PF13761 Domain of unknown function (DUF4166) HCN55_RS09610 PF14158 YndJ-like protein HCN55_RS09620 PF05908 Poly-gamma-glutamate hydrolase HCN55_RS09625 PF10710 Protein of unknown function (DUF2512) HCN55_RS09630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_RS09635 PF01726 LexA DNA binding domain HCN55_RS09635 PF00717 Peptidase S24-like HCN55_RS09640 PF01476 LysM domain HCN55_RS09645 PF00239 Resolvase, N terminal domain HCN55_RS09650 PF05979 Bacterial protein of unknown function (DUF896) HCN55_RS09655 PF00456 Transketolase, thiamine diphosphate binding domain HCN55_RS09655 PF02780 Transketolase, C-terminal domain HCN55_RS09655 PF02779 Transketolase, pyrimidine binding domain HCN55_RS09660 PF10747 Sporulation inhibitor of replication protein SirA HCN55_RS09665 PF03672 Uncharacterised protein family (UPF0154) HCN55_RS09670 PF09388 Spo0E like sporulation regulatory protein HCN55_RS09675 PF02683 Cytochrome C biogenesis protein transmembrane region HCN55_RS09680 PF00072 Response regulator receiver domain HCN55_RS09685 PF07301 Protein of unknown function (DUF1453) HCN55_RS09690 PF11084 Protein of unknown function (DUF2621) HCN55_RS09700 PF08179 Small acid-soluble spore protein P family HCN55_RS09710 PF00330 Aconitase family (aconitate hydratase) HCN55_RS09710 PF00694 Aconitase C-terminal domain HCN55_RS09715 PF00578 AhpC/TSA family HCN55_RS09720 PF13040 Fur-regulated basic protein B HCN55_RS09725 PF08177 Small acid-soluble spore protein N family HCN55_RS09735 PF03061 Thioesterase superfamily HCN55_RS09745 PF01521 Iron-sulphur cluster biosynthesis HCN55_RS09750 PF02660 Glycerol-3-phosphate acyltransferase HCN55_RS09755 PF13380 CoA binding domain HCN55_RS09760 PF01751 Toprim domain HCN55_RS09760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS09760 PF00986 DNA gyrase B subunit, carboxyl terminus HCN55_RS09760 PF00204 DNA gyrase B HCN55_RS09765 PF03989 DNA gyrase C-terminal domain, beta-propeller HCN55_RS09765 PF00521 DNA gyrase/topoisomerase IV, subunit A HCN55_RS09775 PF01235 Sodium:alanine symporter family HCN55_RS09785 PF17452 Uncharacterized YnfE-like HCN55_RS09790 PF17189 Glycosyl hydrolase family 30 beta sandwich domain HCN55_RS09795 PF04616 Glycosyl hydrolases family 43 HCN55_RS09795 PF03422 Carbohydrate binding module (family 6) HCN55_RS09800 PF04138 GtrA-like protein HCN55_RS09805 PF00483 Nucleotidyl transferase HCN55_RS09810 PF09335 SNARE associated Golgi protein HCN55_RS09820 PF01039 Carboxyl transferase domain HCN55_RS09825 PF00378 Enoyl-CoA hydratase/isomerase HCN55_RS09830 PF00682 HMGL-like HCN55_RS09835 PF00364 Biotin-requiring enzyme HCN55_RS09840 PF00289 Biotin carboxylase, N-terminal domain HCN55_RS09840 PF02785 Biotin carboxylase C-terminal domain HCN55_RS09840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HCN55_RS09845 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS09845 PF00501 AMP-binding enzyme HCN55_RS09850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HCN55_RS09850 PF02770 Acyl-CoA dehydrogenase, middle domain HCN55_RS09850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HCN55_RS09855 PF17329 Family of unknown function (DUF5367) HCN55_RS09865 PF02638 Glycosyl hydrolase-like 10 HCN55_RS09870 PF07098 Protein of unknown function (DUF1360) HCN55_RS09875 PF00501 AMP-binding enzyme HCN55_RS09875 PF00668 Condensation domain HCN55_RS09875 PF00550 Phosphopantetheine attachment site HCN55_RS09875 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS09875 PF00975 Thioesterase domain HCN55_RS09880 PF00501 AMP-binding enzyme HCN55_RS09880 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS09880 PF00668 Condensation domain HCN55_RS09880 PF00550 Phosphopantetheine attachment site HCN55_RS09885 PF00550 Phosphopantetheine attachment site HCN55_RS09885 PF00668 Condensation domain HCN55_RS09885 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS09885 PF00501 AMP-binding enzyme HCN55_RS09890 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS09890 PF00501 AMP-binding enzyme HCN55_RS09890 PF00550 Phosphopantetheine attachment site HCN55_RS09890 PF00668 Condensation domain HCN55_RS09895 PF00550 Phosphopantetheine attachment site HCN55_RS09895 PF00501 AMP-binding enzyme HCN55_RS09895 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS09895 PF00668 Condensation domain HCN55_RS09900 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HCN55_RS09905 PF01263 Aldose 1-epimerase HCN55_RS09910 PF01554 MatE HCN55_RS09915 PF16800 IseA DL-endopeptidase inhibitor HCN55_RS09925 PF00589 Phage integrase family HCN55_RS09930 PF12728 Helix-turn-helix domain HCN55_RS09940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS09940 PF03466 LysR substrate binding domain HCN55_RS09945 PF00107 Zinc-binding dehydrogenase HCN55_RS09945 PF08240 Alcohol dehydrogenase GroES-like domain HCN55_RS09950 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_RS09950 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HCN55_RS09955 PF01493 GXGXG motif HCN55_RS09955 PF01645 Conserved region in glutamate synthase HCN55_RS09955 PF00310 Glutamine amidotransferases class-II HCN55_RS09955 PF04898 Glutamate synthase central domain HCN55_RS09960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS09960 PF03466 LysR substrate binding domain HCN55_RS09965 PF01472 PUA domain HCN55_RS09965 PF00696 Amino acid kinase family HCN55_RS09970 PF14748 Pyrroline-5-carboxylate reductase dimerisation HCN55_RS09970 PF03807 NADP oxidoreductase coenzyme F420-dependent HCN55_RS09975 PF02334 Replication terminator protein HCN55_RS09980 PF00106 short chain dehydrogenase HCN55_RS09985 PF06103 Bacterial protein of unknown function (DUF948) HCN55_RS09995 PF13302 Acetyltransferase (GNAT) domain HCN55_RS10000 PF07690 Major Facilitator Superfamily HCN55_RS10005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCN55_RS10005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCN55_RS10010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCN55_RS10010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCN55_RS10015 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCN55_RS10015 PF01568 Molydopterin dinucleotide binding domain HCN55_RS10015 PF00384 Molybdopterin oxidoreductase HCN55_RS10025 PF17094 Uncharacterised protein family (UPF0715) HCN55_RS10040 PF13217 Protein of unknown function (DUF4025) HCN55_RS10045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_RS10045 PF05227 CHASE3 domain HCN55_RS10045 PF00672 HAMP domain HCN55_RS10050 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal HCN55_RS10050 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal HCN55_RS10055 PF03330 Lytic transglycolase HCN55_RS10060 PF06912 Protein of unknown function (DUF1275) HCN55_RS10065 PF00544 Pectate lyase HCN55_RS10070 PF02586 SOS response associated peptidase (SRAP) HCN55_RS10080 PF00190 Cupin HCN55_RS10085 PF16302 Domain of unknown function (DUF4944) HCN55_RS10095 PF00583 Acetyltransferase (GNAT) family HCN55_RS10095 PF14268 YoaP-like HCN55_RS10115 PF04294 VanW like protein HCN55_RS10120 PF11188 Protein of unknown function (DUF2975) HCN55_RS10125 PF13443 Cro/C1-type HTH DNA-binding domain HCN55_RS10130 PF05675 Protein of unknown function (DUF817) HCN55_RS10135 PF03466 LysR substrate binding domain HCN55_RS10135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS10140 PF00892 EamA-like transporter family HCN55_RS10150 PF01965 DJ-1/PfpI family HCN55_RS10165 PF11518 Protein of unknown function (DUF3221) HCN55_RS10180 PF00391 PEP-utilising enzyme, mobile domain HCN55_RS10180 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HCN55_RS10185 PF00457 Glycosyl hydrolases family 11 HCN55_RS10190 PF05154 TM2 domain HCN55_RS10195 PF01381 Helix-turn-helix HCN55_RS10210 PF02586 SOS response associated peptidase (SRAP) HCN55_RS10245 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_RS10260 PF08863 YolD-like protein HCN55_RS10270 PF07693 KAP family P-loop domain HCN55_RS10295 PF04740 LXG domain of WXG superfamily HCN55_RS10295 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH HCN55_RS10300 PF09346 SMI1 / KNR4 family (SUKH-1) HCN55_RS10305 PF01593 Flavin containing amine oxidoreductase HCN55_RS10310 PF12708 Pectate lyase superfamily protein HCN55_RS10310 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain HCN55_RS10315 PF01588 Putative tRNA binding domain HCN55_RS10320 PF07883 Cupin domain HCN55_RS10320 PF12833 Helix-turn-helix domain HCN55_RS10325 PF00583 Acetyltransferase (GNAT) family HCN55_RS10330 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS10330 PF13305 Tetracyclin repressor-like, C-terminal domain HCN55_RS10335 PF00753 Metallo-beta-lactamase superfamily HCN55_RS10340 PF06445 GyrI-like small molecule binding domain HCN55_RS10345 PF08279 HTH domain HCN55_RS10345 PF13280 WYL domain HCN55_RS10355 PF01022 Bacterial regulatory protein, arsR family HCN55_RS10365 PF04238 Protein of unknown function (DUF420) HCN55_RS10370 PF18846 Bacterial archaeo-eukaryotic release factor family 5 HCN55_RS10380 PF17676 LD-carboxypeptidase C-terminal domain HCN55_RS10380 PF02016 LD-carboxypeptidase N-terminal domain HCN55_RS10385 PF00487 Fatty acid desaturase HCN55_RS10390 PF07730 Histidine kinase HCN55_RS10395 PF00072 Response regulator receiver domain HCN55_RS10395 PF00196 Bacterial regulatory proteins, luxR family HCN55_RS10400 PF01476 LysM domain HCN55_RS10400 PF06725 3D domain HCN55_RS10405 PF16124 RecQ zinc-binding HCN55_RS10405 PF00570 HRDC domain HCN55_RS10405 PF00271 Helicase conserved C-terminal domain HCN55_RS10405 PF09382 RQC domain HCN55_RS10405 PF00270 DEAD/DEAH box helicase HCN55_RS10415 PF02525 Flavodoxin-like fold HCN55_RS10420 PF01258 Prokaryotic dksA/traR C4-type zinc finger HCN55_RS10435 PF00011 Hsp20/alpha crystallin family HCN55_RS10450 PF08000 Bacterial PH domain HCN55_RS10460 PF00171 Aldehyde dehydrogenase family HCN55_RS10465 PF13249 Squalene-hopene cyclase N-terminal domain HCN55_RS10465 PF13243 Squalene-hopene cyclase C-terminal domain HCN55_RS10470 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HCN55_RS10470 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HCN55_RS10475 PF00209 Sodium:neurotransmitter symporter family HCN55_RS10480 PF01758 Sodium Bile acid symporter family HCN55_RS10485 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HCN55_RS10485 PF00364 Biotin-requiring enzyme HCN55_RS10485 PF02817 e3 binding domain HCN55_RS10490 PF00676 Dehydrogenase E1 component HCN55_RS10490 PF02779 Transketolase, pyrimidine binding domain HCN55_RS10490 PF16870 2-oxoglutarate dehydrogenase C-terminal HCN55_RS10495 PF00092 von Willebrand factor type A domain HCN55_RS10500 PF07728 AAA domain (dynein-related subfamily) HCN55_RS10505 PF13627 Prokaryotic lipoprotein-attachment site HCN55_RS10505 PF00080 Copper/zinc superoxide dismutase (SODC) HCN55_RS10510 PF01476 LysM domain HCN55_RS10510 PF00877 NlpC/P60 family HCN55_RS10515 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase HCN55_RS10520 PF10372 Bacterial membrane-spanning protein N-terminus HCN55_RS10520 PF02457 DisA bacterial checkpoint controller nucleotide-binding HCN55_RS10525 PF01554 MatE HCN55_RS10530 PF01740 STAS domain HCN55_RS10535 PF02585 GlcNAc-PI de-N-acetylase HCN55_RS10540 PF08830 Protein of unknown function (DUF1806) HCN55_RS10550 PF00892 EamA-like transporter family HCN55_RS10565 PF02447 GntP family permease HCN55_RS10570 PF14552 Tautomerase enzyme HCN55_RS10575 PF01638 HxlR-like helix-turn-helix HCN55_RS10580 PF00881 Nitroreductase family HCN55_RS10585 PF01738 Dienelactone hydrolase family HCN55_RS10590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_RS10595 PF11755 Protein of unknown function (DUF3311) HCN55_RS10600 PF00474 Sodium:solute symporter family HCN55_RS10605 PF03572 Peptidase family S41 HCN55_RS10605 PF17820 PDZ domain HCN55_RS10605 PF01471 Putative peptidoglycan binding domain HCN55_RS10610 PF08241 Methyltransferase domain HCN55_RS10620 PF02557 D-alanyl-D-alanine carboxypeptidase HCN55_RS10625 PF01048 Phosphorylase superfamily HCN55_RS10635 PF14191 YodL-like HCN55_RS10640 PF01569 PAP2 superfamily HCN55_RS10645 PF14162 YozD-like protein HCN55_RS10660 PF06855 YozE SAM-like fold HCN55_RS10665 PF14122 YokU-like protein, putative antitoxin HCN55_RS10670 PF12544 Lysine-2,3-aminomutase HCN55_RS10675 PF00583 Acetyltransferase (GNAT) family HCN55_RS10680 PF01546 Peptidase family M20/M25/M40 HCN55_RS10680 PF07687 Peptidase dimerisation domain HCN55_RS10685 PF01144 Coenzyme A transferase HCN55_RS10690 PF01144 Coenzyme A transferase HCN55_RS10695 PF00202 Aminotransferase class-III HCN55_RS10710 PF00583 Acetyltransferase (GNAT) family HCN55_RS10715 PF00535 Glycosyl transferase family 2 HCN55_RS10730 PF12996 DUF based on E. rectale Gene description (DUF3880) HCN55_RS10735 PF02333 Phytase HCN55_RS10740 PF08485 Polysaccharide biosynthesis protein C-terminal HCN55_RS10740 PF02719 Polysaccharide biosynthesis protein HCN55_RS10755 PF13443 Cro/C1-type HTH DNA-binding domain HCN55_RS10805 PF00149 Calcineurin-like phosphoesterase HCN55_RS10810 PF00269 Small, acid-soluble spore proteins, alpha/beta type HCN55_RS10840 PF06445 GyrI-like small molecule binding domain HCN55_RS10845 PF00692 dUTPase HCN55_RS10850 PF00085 Thioredoxin HCN55_RS10860 PF13392 HNH endonuclease HCN55_RS10870 PF02867 Ribonucleotide reductase, barrel domain HCN55_RS10870 PF00317 Ribonucleotide reductase, all-alpha domain HCN55_RS10870 PF08343 Ribonucleotide reductase N-terminal HCN55_RS10870 PF14528 LAGLIDADG-like domain HCN55_RS10875 PF02867 Ribonucleotide reductase, barrel domain HCN55_RS10875 PF14528 LAGLIDADG-like domain HCN55_RS10875 PF08343 Ribonucleotide reductase N-terminal HCN55_RS10875 PF00317 Ribonucleotide reductase, all-alpha domain HCN55_RS10880 PF07972 NrdI Flavodoxin like HCN55_RS10970 PF00145 C-5 cytosine-specific DNA methylase HCN55_RS10980 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) HCN55_RS10985 PF02223 Thymidylate kinase HCN55_RS10995 PF09629 YorP protein HCN55_RS11010 PF06725 3D domain HCN55_RS11015 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HCN55_RS11015 PF07733 Bacterial DNA polymerase III alpha NTPase domain HCN55_RS11015 PF02811 PHP domain HCN55_RS11015 PF14579 Helix-hairpin-helix motif HCN55_RS11020 PF01368 DHH family HCN55_RS11020 PF17768 RecJ OB domain HCN55_RS11030 PF03796 DnaB-like helicase C terminal domain HCN55_RS11055 PF09636 XkdW protein HCN55_RS11070 PF13229 Right handed beta helix region HCN55_RS11075 PF05908 Poly-gamma-glutamate hydrolase HCN55_RS11090 PF02586 SOS response associated peptidase (SRAP) HCN55_RS11095 PF01068 ATP dependent DNA ligase domain HCN55_RS11125 PF14037 YoqO-like protein HCN55_RS11140 PF01844 HNH endonuclease HCN55_RS11150 PF06908 YspA SLOG family HCN55_RS11180 PF03374 Phage antirepressor protein KilAC domain HCN55_RS11180 PF09669 Phage regulatory protein Rha (Phage_pRha) HCN55_RS11210 PF09643 YopX protein HCN55_RS11230 PF09467 Hypothetical protein Yopt HCN55_RS11235 PF13443 Cro/C1-type HTH DNA-binding domain HCN55_RS11245 PF14072 DNA-sulfur modification-associated HCN55_RS11250 PF02899 Phage integrase, N-terminal SAM-like domain HCN55_RS11250 PF00589 Phage integrase family HCN55_RS11255 PF01381 Helix-turn-helix HCN55_RS11290 PF14163 Super-infection exclusion protein B HCN55_RS11320 PF17094 Uncharacterised protein family (UPF0715) HCN55_RS11325 PF08808 RES domain HCN55_RS11330 PF13443 Cro/C1-type HTH DNA-binding domain HCN55_RS11370 PF01381 Helix-turn-helix HCN55_RS11385 PF00216 Bacterial DNA-binding protein HCN55_RS11395 PF09642 YonK protein HCN55_RS11420 PF03237 Terminase-like family HCN55_RS11505 PF09693 Phage uncharacterised protein (Phage_XkdX) HCN55_RS11520 PF13495 Phage integrase, N-terminal SAM-like domain HCN55_RS11520 PF00589 Phage integrase family HCN55_RS11550 PF10145 Phage-related minor tail protein HCN55_RS11550 PF01464 Transglycosylase SLT domain HCN55_RS11550 PF01551 Peptidase family M23 HCN55_RS11555 PF05709 Phage tail protein HCN55_RS11560 PF06605 Prophage endopeptidase tail HCN55_RS11570 PF09992 Phosphodiester glycosidase HCN55_RS11570 PF12708 Pectate lyase superfamily protein HCN55_RS11585 PF01510 N-acetylmuramoyl-L-alanine amidase HCN55_RS11590 PF10960 BhlA holin family HCN55_RS11595 PF04688 SPP1 phage holin HCN55_RS11600 PF02600 Disulfide bond formation protein DsbB HCN55_RS11605 PF00535 Glycosyl transferase family 2 HCN55_RS11610 PF00085 Thioredoxin HCN55_RS11615 PF00005 ABC transporter HCN55_RS11615 PF03412 Peptidase C39 family HCN55_RS11615 PF00664 ABC transporter transmembrane region HCN55_RS11625 PF06713 Bacterial PH domain HCN55_RS11630 PF00817 impB/mucB/samB family HCN55_RS11630 PF11799 impB/mucB/samB family C-terminal domain HCN55_RS11630 PF11798 IMS family HHH motif HCN55_RS11635 PF08863 YolD-like protein HCN55_RS11650 PF16219 Domain of unknown function (DUF4879) HCN55_RS11660 PF13302 Acetyltransferase (GNAT) domain HCN55_RS11670 PF09346 SMI1 / KNR4 family (SUKH-1) HCN55_RS11675 PF15652 HNH/Endo VII superfamily toxin with a SHH signature HCN55_RS11675 PF04740 LXG domain of WXG superfamily HCN55_RS11680 PF09346 SMI1 / KNR4 family (SUKH-1) HCN55_RS11695 PF00565 Staphylococcal nuclease homologue HCN55_RS11695 PF05901 Excalibur calcium-binding domain HCN55_RS11700 PF14470 Bacterial PH domain HCN55_RS11705 PF02522 Aminoglycoside 3-N-acetyltransferase HCN55_RS11730 PF00239 Resolvase, N terminal domain HCN55_RS11730 PF07508 Recombinase HCN55_RS11735 PF02719 Polysaccharide biosynthesis protein HCN55_RS11740 PF01641 SelR domain HCN55_RS11745 PF01625 Peptide methionine sulfoxide reductase HCN55_RS11750 PF01047 MarR family HCN55_RS11755 PF01554 MatE HCN55_RS11760 PF17431 Uncharacterized YmpT-like HCN55_RS11765 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) HCN55_RS11770 PF13472 GDSL-like Lipase/Acylhydrolase family HCN55_RS11775 PF02630 SCO1/SenC HCN55_RS11780 PF10751 Protein of unknown function (DUF2535) HCN55_RS11785 PF00291 Pyridoxal-phosphate dependent enzyme HCN55_RS11785 PF00585 C-terminal regulatory domain of Threonine dehydratase HCN55_RS11790 PF08461 Ribonuclease R winged-helix domain HCN55_RS11790 PF00158 Sigma-54 interaction domain HCN55_RS11795 PF03006 Haemolysin-III related HCN55_RS11805 PF00186 Dihydrofolate reductase HCN55_RS11810 PF00303 Thymidylate synthase HCN55_RS11815 PF04608 Phosphatidylglycerophosphatase A HCN55_RS11820 PF14005 YpjP-like protein HCN55_RS11825 PF04445 Putative SAM-dependent methyltransferase HCN55_RS11830 PF06491 Disulphide isomerase HCN55_RS11835 PF00920 Dehydratase family HCN55_RS11840 PF08712 Scaffold protein Nfu/NifU N terminal HCN55_RS11840 PF13769 Virulence factor HCN55_RS11845 PF01966 HD domain HCN55_RS11850 PF00255 Glutathione peroxidase HCN55_RS11855 PF04204 Homoserine O-succinyltransferase HCN55_RS11860 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase HCN55_RS11860 PF00534 Glycosyl transferases group 1 HCN55_RS11870 PF00313 'Cold-shock' DNA-binding domain HCN55_RS11880 PF10819 Protein of unknown function (DUF2564) HCN55_RS11885 PF10782 Zinc-finger HCN55_RS11890 PF13456 Reverse transcriptase-like HCN55_RS11895 PF02592 Putative vitamin uptake transporter HCN55_RS11900 PF13456 Reverse transcriptase-like HCN55_RS11910 PF01367 5'-3' exonuclease, C-terminal SAM fold HCN55_RS11910 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HCN55_RS11920 PF10752 Protein of unknown function (DUF2533) HCN55_RS11925 PF00350 Dynamin family HCN55_RS11935 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family HCN55_RS11940 PF00195 Chalcone and stilbene synthases, N-terminal domain HCN55_RS11940 PF02797 Chalcone and stilbene synthases, C-terminal domain HCN55_RS11945 PF00860 Permease family HCN55_RS11950 PF00156 Phosphoribosyl transferase domain HCN55_RS11955 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HCN55_RS11960 PF03812 2-keto-3-deoxygluconate permease HCN55_RS11965 PF01081 KDPG and KHG aldolase HCN55_RS11970 PF00294 pfkB family carbohydrate kinase HCN55_RS11975 PF00356 Bacterial regulatory proteins, lacI family HCN55_RS11980 PF04962 KduI/IolB family HCN55_RS11990 PF13307 Helicase C-terminal domain HCN55_RS12000 PF14139 YpzG-like protein HCN55_RS12005 PF01170 Putative RNA methylase family UPF0020 HCN55_RS12005 PF02926 THUMP domain HCN55_RS12015 PF05103 DivIVA protein HCN55_RS12020 PF06908 YspA SLOG family HCN55_RS12025 PF11122 Inner spore coat protein D HCN55_RS12035 PF13482 RNase_H superfamily HCN55_RS12040 PF00270 DEAD/DEAH box helicase HCN55_RS12040 PF09369 Domain of unknown function (DUF1998) HCN55_RS12040 PF00271 Helicase conserved C-terminal domain HCN55_RS12045 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HCN55_RS12055 PF14179 YppG-like protein HCN55_RS12060 PF14178 YppF-like protein HCN55_RS12065 PF08807 Bacterial domain of unknown function (DUF1798) HCN55_RS12070 PF17522 Family of unknown function (DUF5446) HCN55_RS12080 PF10720 Protein of unknown function (DUF2515) HCN55_RS12085 PF03838 Recombination protein U HCN55_RS12090 PF00905 Penicillin binding protein transpeptidase domain HCN55_RS12090 PF00912 Transglycosylase HCN55_RS12100 PF00633 Helix-hairpin-helix motif HCN55_RS12100 PF00730 HhH-GPD superfamily base excision DNA repair protein HCN55_RS12100 PF10576 Iron-sulfur binding domain of endonuclease III HCN55_RS12105 PF07261 Replication initiation and membrane attachment HCN55_RS12110 PF00152 tRNA synthetases class II (D, K and N) HCN55_RS12110 PF01336 OB-fold nucleic acid binding domain HCN55_RS12115 PF00155 Aminotransferase class I and II HCN55_RS12120 PF17881 Domain of unknown function (DUF5590) HCN55_RS12120 PF03413 Peptidase propeptide and YPEB domain HCN55_RS12125 PF14084 Protein of unknown function (DUF4264) HCN55_RS12130 PF00929 Exonuclease HCN55_RS12130 PF04851 Type III restriction enzyme, res subunit HCN55_RS12130 PF13307 Helicase C-terminal domain HCN55_RS12135 PF02261 Aspartate decarboxylase HCN55_RS12140 PF02569 Pantoate-beta-alanine ligase HCN55_RS12145 PF02548 Ketopantoate hydroxymethyltransferase HCN55_RS12150 PF02237 Biotin protein ligase C terminal domain HCN55_RS12150 PF03099 Biotin/lipoate A/B protein ligase family HCN55_RS12150 PF08279 HTH domain HCN55_RS12155 PF12627 Probable RNA and SrmB- binding site of polymerase A HCN55_RS12155 PF13735 tRNA nucleotidyltransferase domain 2 putative HCN55_RS12155 PF01743 Poly A polymerase head domain HCN55_RS12160 PF13439 Glycosyltransferase Family 4 HCN55_RS12160 PF00534 Glycosyl transferases group 1 HCN55_RS12165 PF02585 GlcNAc-PI de-N-acetylase HCN55_RS12170 PF02142 MGS-like domain HCN55_RS12175 PF05173 Dihydrodipicolinate reductase, C-terminus HCN55_RS12175 PF01113 Dihydrodipicolinate reductase, N-terminus HCN55_RS12180 PF03819 MazG nucleotide pyrophosphohydrolase domain HCN55_RS12185 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HCN55_RS12185 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HCN55_RS12190 PF09577 Sporulation protein YpjB (SpoYpjB) HCN55_RS12195 PF07187 Protein of unknown function (DUF1405) HCN55_RS12200 PF00032 Cytochrome b(C-terminal)/b6/petD HCN55_RS12200 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HCN55_RS12205 PF00033 Cytochrome b/b6/petB HCN55_RS12210 PF00355 Rieske [2Fe-2S] domain HCN55_RS12215 PF10673 Protein of unknown function (DUF2487) HCN55_RS12220 PF08858 IDEAL domain HCN55_RS12220 PF08864 UPF0302 domain HCN55_RS12230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HCN55_RS12235 PF02153 Prephenate dehydrogenase HCN55_RS12235 PF01842 ACT domain HCN55_RS12240 PF00155 Aminotransferase class I and II HCN55_RS12245 PF00290 Tryptophan synthase alpha chain HCN55_RS12250 PF00291 Pyridoxal-phosphate dependent enzyme HCN55_RS12255 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HCN55_RS12260 PF00218 Indole-3-glycerol phosphate synthase HCN55_RS12265 PF02885 Glycosyl transferase family, helical bundle domain HCN55_RS12265 PF00591 Glycosyl transferase family, a/b domain HCN55_RS12270 PF00425 chorismate binding enzyme HCN55_RS12270 PF04715 Anthranilate synthase component I, N terminal region HCN55_RS12275 PF07736 Chorismate mutase type I HCN55_RS12280 PF01761 3-dehydroquinate synthase HCN55_RS12285 PF01264 Chorismate synthase HCN55_RS12290 PF03705 CheR methyltransferase, all-alpha domain HCN55_RS12290 PF01739 CheR methyltransferase, SAM binding domain HCN55_RS12295 PF00334 Nucleoside diphosphate kinase HCN55_RS12300 PF00348 Polyprenyl synthetase HCN55_RS12305 PF01209 ubiE/COQ5 methyltransferase family HCN55_RS12310 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 HCN55_RS12315 PF02081 Tryptophan RNA-binding attenuator protein HCN55_RS12320 PF01227 GTP cyclohydrolase I HCN55_RS12325 PF00216 Bacterial DNA-binding protein HCN55_RS12330 PF09547 Stage IV sporulation protein A (spore_IV_A) HCN55_RS12340 PF10966 Protein of unknown function (DUF2768) HCN55_RS12345 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HCN55_RS12345 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HCN55_RS12350 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HCN55_RS12350 PF01926 50S ribosome-binding GTPase HCN55_RS12360 PF14045 YIEGIA protein HCN55_RS12370 PF14140 YpzI-like protein HCN55_RS12375 PF01070 FMN-dependent dehydrogenase HCN55_RS12380 PF00575 S1 RNA binding domain HCN55_RS12385 PF02224 Cytidylate kinase HCN55_RS12390 PF17313 Family of unknown function (DUF5359) HCN55_RS12395 PF12945 Flagellar protein YcgR HCN55_RS12395 PF07238 PilZ domain HCN55_RS12400 PF03413 Peptidase propeptide and YPEB domain HCN55_RS12400 PF14620 YpeB sporulation HCN55_RS12405 PF07486 Cell Wall Hydrolase HCN55_RS12405 PF01471 Putative peptidoglycan binding domain HCN55_RS12410 PF13367 PrsW family intramembrane metalloprotease HCN55_RS12420 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HCN55_RS12420 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HCN55_RS12425 PF05389 Negative regulator of genetic competence (MecA) HCN55_RS12430 PF00149 Calcineurin-like phosphoesterase HCN55_RS12435 PF10864 Protein of unknown function (DUF2663) HCN55_RS12440 PF01476 LysM domain HCN55_RS12445 PF02517 CPBP intramembrane metalloprotease HCN55_RS12450 PF00270 DEAD/DEAH box helicase HCN55_RS12450 PF00271 Helicase conserved C-terminal domain HCN55_RS12455 PF14493 Helix-turn-helix domain HCN55_RS12465 PF12822 ECF transporter, substrate-specific component HCN55_RS12470 PF01842 ACT domain HCN55_RS12470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCN55_RS12470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCN55_RS12475 PF01487 Type I 3-dehydroquinase HCN55_RS12485 PF08281 Sigma-70, region 4 HCN55_RS12485 PF04542 Sigma-70 region 2 HCN55_RS12490 PF00989 PAS fold HCN55_RS12490 PF00512 His Kinase A (phospho-acceptor) domain HCN55_RS12490 PF18698 Histidine kinase sensor domain HCN55_RS12490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS12490 PF00672 HAMP domain HCN55_RS12495 PF00072 Response regulator receiver domain HCN55_RS12495 PF00486 Transcriptional regulatory protein, C terminal HCN55_RS12500 PF01578 Cytochrome C assembly protein HCN55_RS12505 PF05140 ResB-like family HCN55_RS12510 PF00578 AhpC/TSA family HCN55_RS12515 PF01479 S4 domain HCN55_RS12515 PF00849 RNA pseudouridylate synthase HCN55_RS12520 PF07670 Nucleoside recognition HCN55_RS12525 PF07670 Nucleoside recognition HCN55_RS12530 PF00768 D-alanyl-D-alanine carboxypeptidase HCN55_RS12530 PF07943 Penicillin-binding protein 5, C-terminal domain HCN55_RS12535 PF13047 Protein of unknown function (DUF3907) HCN55_RS12540 PF04079 Segregation and condensation complex subunit ScpB HCN55_RS12545 PF02616 Segregation and condensation protein ScpA HCN55_RS12550 PF03745 Domain of unknown function (DUF309) HCN55_RS12555 PF00583 Acetyltransferase (GNAT) family HCN55_RS12560 PF00885 6,7-dimethyl-8-ribityllumazine synthase HCN55_RS12565 PF00925 GTP cyclohydrolase II HCN55_RS12565 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HCN55_RS12570 PF00677 Lumazine binding domain HCN55_RS12575 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HCN55_RS12575 PF01872 RibD C-terminal domain HCN55_RS12585 PF10502 Signal peptidase, peptidase S26 HCN55_RS12595 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) HCN55_RS12605 PF10676 Spore germination protein gerPA/gerPF HCN55_RS12610 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HCN55_RS12615 PF06207 Protein of unknown function (DUF1002) HCN55_RS12620 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HCN55_RS12620 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HCN55_RS12625 PF03323 Bacillus/Clostridium GerA spore germination protein HCN55_RS12630 PF14097 Stage V sporulation protein AE1 HCN55_RS12635 PF03862 SpoVAC/SpoVAEB sporulation membrane protein HCN55_RS12640 PF07451 Stage V sporulation protein AD (SpoVAD) HCN55_RS12645 PF03862 SpoVAC/SpoVAEB sporulation membrane protein HCN55_RS12650 PF13782 Stage V sporulation protein AB HCN55_RS12655 PF12164 Stage V sporulation protein AA HCN55_RS12660 PF04539 Sigma-70 region 3 HCN55_RS12660 PF04545 Sigma-70, region 4 HCN55_RS12660 PF04542 Sigma-70 region 2 HCN55_RS12665 PF13581 Histidine kinase-like ATPase domain HCN55_RS12670 PF01740 STAS domain HCN55_RS12675 PF00768 D-alanyl-D-alanine carboxypeptidase HCN55_RS12675 PF07943 Penicillin-binding protein 5, C-terminal domain HCN55_RS12680 PF01048 Phosphorylase superfamily HCN55_RS12685 PF01676 Metalloenzyme superfamily HCN55_RS12690 PF02899 Phage integrase, N-terminal SAM-like domain HCN55_RS12690 PF00589 Phage integrase family HCN55_RS12695 PF14004 Protein of unknown function (DUF4227) HCN55_RS12700 PF01475 Ferric uptake regulator family HCN55_RS12705 PF01944 Stage II sporulation protein M HCN55_RS12715 PF00390 Malic enzyme, N-terminal domain HCN55_RS12715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCN55_RS12715 PF03949 Malic enzyme, NAD binding domain HCN55_RS12720 PF03553 Na+/H+ antiporter family HCN55_RS12725 PF00206 Lyase HCN55_RS12725 PF10415 Fumarase C C-terminus HCN55_RS12730 PF00710 Asparaginase, N-terminal HCN55_RS12730 PF17763 Glutaminase/Asparaginase C-terminal domain HCN55_RS12735 PF01381 Helix-turn-helix HCN55_RS12745 PF00293 NUDIX domain HCN55_RS12750 PF13072 Mother cell inhibitor of FtsZ HCN55_RS12755 PF00248 Aldo/keto reductase family HCN55_RS12760 PF13025 Protein of unknown function (DUF3886) HCN55_RS12765 PF12146 Serine aminopeptidase, S33 HCN55_RS12770 PF10827 Protein of unknown function (DUF2552) HCN55_RS12775 PF01521 Iron-sulphur cluster biosynthesis HCN55_RS12780 PF04229 GrpB protein HCN55_RS12780 PF13673 Acetyltransferase (GNAT) domain HCN55_RS12785 PF03992 Antibiotic biosynthesis monooxygenase HCN55_RS12790 PF00583 Acetyltransferase (GNAT) family HCN55_RS12795 PF08863 YolD-like protein HCN55_RS12800 PF11799 impB/mucB/samB family C-terminal domain HCN55_RS12800 PF00817 impB/mucB/samB family HCN55_RS12805 PF14164 YqzH-like protein HCN55_RS12810 PF07690 Major Facilitator Superfamily HCN55_RS12825 PF00485 Phosphoribulokinase / Uridine kinase family HCN55_RS12830 PF00291 Pyridoxal-phosphate dependent enzyme HCN55_RS12835 PF00106 short chain dehydrogenase HCN55_RS12840 PF00753 Metallo-beta-lactamase superfamily HCN55_RS12845 PF03807 NADP oxidoreductase coenzyme F420-dependent HCN55_RS12845 PF14748 Pyrroline-5-carboxylate reductase dimerisation HCN55_RS12850 PF01546 Peptidase family M20/M25/M40 HCN55_RS12855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HCN55_RS12860 PF12146 Serine aminopeptidase, S33 HCN55_RS12870 PF12706 Beta-lactamase superfamily domain HCN55_RS12875 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HCN55_RS12875 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HCN55_RS12880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCN55_RS12880 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HCN55_RS12885 PF11799 impB/mucB/samB family C-terminal domain HCN55_RS12885 PF11798 IMS family HHH motif HCN55_RS12885 PF00817 impB/mucB/samB family HCN55_RS12895 PF02096 60Kd inner membrane protein HCN55_RS12900 PF09844 Uncharacterized conserved protein (COG2071) HCN55_RS12905 PF01546 Peptidase family M20/M25/M40 HCN55_RS12905 PF07687 Peptidase dimerisation domain HCN55_RS12910 PF01039 Carboxyl transferase domain HCN55_RS12925 PF03734 L,D-transpeptidase catalytic domain HCN55_RS12930 PF11728 Putative aromatic acid exporter C-terminal domain HCN55_RS12930 PF06081 Aromatic acid exporter family member 1 HCN55_RS12935 PF00005 ABC transporter HCN55_RS12940 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS12945 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCN55_RS12950 PF06491 Disulphide isomerase HCN55_RS12955 PF00781 Diacylglycerol kinase catalytic domain HCN55_RS12960 PF07690 Major Facilitator Superfamily HCN55_RS12965 PF06445 GyrI-like small molecule binding domain HCN55_RS12965 PF13411 MerR HTH family regulatory protein HCN55_RS12970 PF00364 Biotin-requiring enzyme HCN55_RS12970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HCN55_RS12970 PF02817 e3 binding domain HCN55_RS12975 PF02779 Transketolase, pyrimidine binding domain HCN55_RS12975 PF02780 Transketolase, C-terminal domain HCN55_RS12980 PF00676 Dehydrogenase E1 component HCN55_RS12985 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_RS12985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HCN55_RS12990 PF00871 Acetokinase family HCN55_RS12995 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HCN55_RS12995 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HCN55_RS13000 PF01515 Phosphate acetyl/butaryl transferase HCN55_RS13005 PF00158 Sigma-54 interaction domain HCN55_RS13005 PF02954 Bacterial regulatory protein, Fis family HCN55_RS13005 PF00989 PAS fold HCN55_RS13010 PF11118 Protein of unknown function (DUF2627) HCN55_RS13020 PF03972 MmgE/PrpD family HCN55_RS13025 PF00285 Citrate synthase, C-terminal domain HCN55_RS13030 PF02770 Acyl-CoA dehydrogenase, middle domain HCN55_RS13030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HCN55_RS13030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HCN55_RS13035 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HCN55_RS13035 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HCN55_RS13040 PF02803 Thiolase, C-terminal domain HCN55_RS13040 PF00108 Thiolase, N-terminal domain HCN55_RS13045 PF03009 Glycerophosphoryl diester phosphodiesterase family HCN55_RS13050 PF01520 N-acetylmuramoyl-L-alanine amidase HCN55_RS13065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HCN55_RS13070 PF08769 Sporulation initiation factor Spo0A C terminal HCN55_RS13070 PF00072 Response regulator receiver domain HCN55_RS13075 PF05580 SpoIVB peptidase S55 HCN55_RS13075 PF17820 PDZ domain HCN55_RS13080 PF13476 AAA domain HCN55_RS13085 PF02863 Arginine repressor, C-terminal domain HCN55_RS13085 PF01316 Arginine repressor, DNA binding domain HCN55_RS13090 PF01728 FtsJ-like methyltransferase HCN55_RS13090 PF01479 S4 domain HCN55_RS13095 PF02779 Transketolase, pyrimidine binding domain HCN55_RS13095 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HCN55_RS13095 PF02780 Transketolase, C-terminal domain HCN55_RS13100 PF00348 Polyprenyl synthetase HCN55_RS13105 PF02609 Exonuclease VII small subunit HCN55_RS13110 PF02601 Exonuclease VII, large subunit HCN55_RS13110 PF13742 OB-fold nucleic acid binding domain HCN55_RS13115 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HCN55_RS13115 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HCN55_RS13120 PF01029 NusB family HCN55_RS13125 PF03780 Asp23 family, cell envelope-related function HCN55_RS13130 PF00289 Biotin carboxylase, N-terminal domain HCN55_RS13130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HCN55_RS13130 PF02785 Biotin carboxylase C-terminal domain HCN55_RS13135 PF00364 Biotin-requiring enzyme HCN55_RS13140 PF12685 SpoIIIAH-like protein HCN55_RS13150 PF09581 Stage III sporulation protein AF (Spore_III_AF) HCN55_RS13155 PF09546 Stage III sporulation protein AE (spore_III_AE) HCN55_RS13160 PF06686 Stage III sporulation protein AC/AD protein family HCN55_RS13165 PF06686 Stage III sporulation protein AC/AD protein family HCN55_RS13170 PF09548 Stage III sporulation protein AB (spore_III_AB) HCN55_RS13180 PF10942 Protein of unknown function (DUF2619) HCN55_RS13185 PF08207 Elongation factor P (EF-P) KOW-like domain HCN55_RS13185 PF01132 Elongation factor P (EF-P) OB domain HCN55_RS13185 PF09285 Elongation factor P, C-terminal HCN55_RS13190 PF00557 Metallopeptidase family M24 HCN55_RS13190 PF01321 Creatinase/Prolidase N-terminal domain HCN55_RS13195 PF01220 Dehydroquinase class II HCN55_RS13200 PF11085 Conserved membrane protein YqhR HCN55_RS13205 PF07136 Protein of unknown function (DUF1385) HCN55_RS13215 PF01734 Patatin-like phospholipase HCN55_RS13220 PF02742 Iron dependent repressor, metal binding and dimerisation domain HCN55_RS13220 PF01325 Iron dependent repressor, N-terminal DNA binding domain HCN55_RS13225 PF03099 Biotin/lipoate A/B protein ligase family HCN55_RS13230 PF00581 Rhodanese-like domain HCN55_RS13235 PF02347 Glycine cleavage system P-protein HCN55_RS13240 PF02347 Glycine cleavage system P-protein HCN55_RS13245 PF01571 Aminomethyltransferase folate-binding domain HCN55_RS13245 PF08669 Glycine cleavage T-protein C-terminal barrel domain HCN55_RS13250 PF00176 SNF2 family N-terminal domain HCN55_RS13250 PF00271 Helicase conserved C-terminal domain HCN55_RS13255 PF11079 Bacterial protein YqhG of unknown function HCN55_RS13260 PF08671 Anti-repressor SinI HCN55_RS13265 PF08671 Anti-repressor SinI HCN55_RS13265 PF01381 Helix-turn-helix HCN55_RS13270 PF12389 Camelysin metallo-endopeptidase HCN55_RS13285 PF13028 Protein of unknown function (DUF3889) HCN55_RS13290 PF14038 YqzE-like protein HCN55_RS13295 PF14173 ComG operon protein 7 HCN55_RS13300 PF15980 Putative Competence protein ComGF HCN55_RS13310 PF07963 Prokaryotic N-terminal methylation motif HCN55_RS13315 PF07963 Prokaryotic N-terminal methylation motif HCN55_RS13320 PF00482 Type II secretion system (T2SS), protein F HCN55_RS13325 PF00437 Type II/IV secretion system protein HCN55_RS13330 PF01544 CorA-like Mg2+ transporter protein HCN55_RS13335 PF00571 CBS domain HCN55_RS13335 PF03471 Transporter associated domain HCN55_RS13335 PF01595 Cyclin M transmembrane N-terminal domain HCN55_RS13340 PF01740 STAS domain HCN55_RS13340 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain HCN55_RS13350 PF03960 ArsC family HCN55_RS13355 PF11117 Protein of unknown function (DUF2626) HCN55_RS13360 PF00753 Metallo-beta-lactamase superfamily HCN55_RS13365 PF10958 Protein of unknown function (DUF2759) HCN55_RS13370 PF01910 Thiamine-binding protein HCN55_RS13380 PF00246 Zinc carboxypeptidase HCN55_RS13385 PF00884 Sulfatase HCN55_RS13390 PF00480 ROK family HCN55_RS13395 PF06014 Bacterial protein of unknown function (DUF910) HCN55_RS13400 PF01694 Rhomboid family HCN55_RS13410 PF01812 5-formyltetrahydrofolate cyclo-ligase family HCN55_RS13415 PF00471 Ribosomal protein L33 HCN55_RS13420 PF00534 Glycosyl transferases group 1 HCN55_RS13420 PF13439 Glycosyltransferase Family 4 HCN55_RS13440 PF00005 ABC transporter HCN55_RS13445 PF00005 ABC transporter HCN55_RS13450 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS13455 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS13460 PF12849 PBP superfamily domain HCN55_RS13470 PF07690 Major Facilitator Superfamily HCN55_RS13475 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HCN55_RS13475 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HCN55_RS13480 PF04306 Protein of unknown function (DUF456) HCN55_RS13485 PF06691 Protein of unknown function (DUF1189) HCN55_RS13500 PF04551 GcpE protein HCN55_RS13515 PF01475 Ferric uptake regulator family HCN55_RS13520 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HCN55_RS13520 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HCN55_RS13525 PF11116 Protein of unknown function (DUF2624) HCN55_RS13530 PF01261 Xylose isomerase-like TIM barrel HCN55_RS13535 PF00270 DEAD/DEAH box helicase HCN55_RS13535 PF00271 Helicase conserved C-terminal domain HCN55_RS13540 PF14181 YqfQ-like protein HCN55_RS13545 PF02401 LytB protein HCN55_RS13550 PF01784 NIF3 (NGG1p interacting factor 3) HCN55_RS13555 PF04816 tRNA (adenine(22)-N(1))-methyltransferase HCN55_RS13560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HCN55_RS13565 PF04545 Sigma-70, region 4 HCN55_RS13565 PF03979 Sigma-70 factor, region 1.1 HCN55_RS13565 PF04542 Sigma-70 region 2 HCN55_RS13565 PF00140 Sigma-70 factor, region 1.2 HCN55_RS13565 PF04539 Sigma-70 region 3 HCN55_RS13570 PF08275 DNA primase catalytic core, N-terminal domain HCN55_RS13570 PF01807 CHC2 zinc finger HCN55_RS13570 PF10410 DnaB-helicase binding domain of primase HCN55_RS13575 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HCN55_RS13580 PF03618 Kinase/pyrophosphorylase HCN55_RS13585 PF00571 CBS domain HCN55_RS13585 PF08279 HTH domain HCN55_RS13590 PF02092 Glycyl-tRNA synthetase beta subunit HCN55_RS13595 PF02091 Glycyl-tRNA synthetase alpha subunit HCN55_RS13600 PF02565 Recombination protein O C terminal HCN55_RS13600 PF11967 Recombination protein O N terminal HCN55_RS13605 PF14006 YqzL-like protein HCN55_RS13610 PF01926 50S ribosome-binding GTPase HCN55_RS13610 PF07650 KH domain HCN55_RS13615 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HCN55_RS13620 PF01219 Prokaryotic diacylglycerol kinase HCN55_RS13625 PF02130 Uncharacterized protein family UPF0054 HCN55_RS13630 PF01966 HD domain HCN55_RS13630 PF07698 7TM receptor with intracellular HD hydrolase HCN55_RS13630 PF07697 7TM-HD extracellular HCN55_RS13635 PF02562 PhoH-like protein HCN55_RS13640 PF06898 Putative stage IV sporulation protein YqfD HCN55_RS13645 PF07873 YabP family HCN55_RS13655 PF12127 SigmaW regulon antibacterial HCN55_RS13660 PF01957 NfeD-like C-terminal, partner-binding HCN55_RS13660 PF01972 Serine dehydrogenase proteinase HCN55_RS13665 PF09424 Yqey-like protein HCN55_RS13670 PF01165 Ribosomal protein S21 HCN55_RS13675 PF02690 Na+/Pi-cotransporter HCN55_RS13680 PF01938 TRAM domain HCN55_RS13680 PF00919 Uncharacterized protein family UPF0004 HCN55_RS13680 PF04055 Radical SAM superfamily HCN55_RS13685 PF04452 RNA methyltransferase HCN55_RS13695 PF00684 DnaJ central domain HCN55_RS13695 PF01556 DnaJ C terminal domain HCN55_RS13695 PF00226 DnaJ domain HCN55_RS13700 PF00012 Hsp70 protein HCN55_RS13705 PF01025 GrpE HCN55_RS13710 PF01628 HrcA protein C terminal domain HCN55_RS13715 PF04055 Radical SAM superfamily HCN55_RS13715 PF06969 HemN C-terminal domain HCN55_RS13720 PF06421 GTP-binding protein LepA C-terminus HCN55_RS13720 PF03144 Elongation factor Tu domain 2 HCN55_RS13720 PF00009 Elongation factor Tu GTP binding domain HCN55_RS13720 PF00679 Elongation factor G C-terminus HCN55_RS13725 PF12438 Protein of unknown function (DUF3679) HCN55_RS13730 PF07454 Stage II sporulation protein P (SpoIIP) HCN55_RS13735 PF03418 Germination protease HCN55_RS13740 PF01649 Ribosomal protein S20 HCN55_RS13745 PF06144 DNA polymerase III, delta subunit HCN55_RS13755 PF14141 YqzM-like protein HCN55_RS13760 PF03772 Competence protein HCN55_RS13760 PF13567 Domain of unknown function (DUF4131) HCN55_RS13760 PF00753 Metallo-beta-lactamase superfamily HCN55_RS13765 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HCN55_RS13770 PF10531 SLBB domain HCN55_RS13775 PF03807 NADP oxidoreductase coenzyme F420-dependent HCN55_RS13775 PF14748 Pyrroline-5-carboxylate reductase dimerisation HCN55_RS13780 PF13649 Methyltransferase domain HCN55_RS13790 PF01966 HD domain HCN55_RS13795 PF01467 Cytidylyltransferase-like HCN55_RS13800 PF01985 CRS1 / YhbY (CRM) domain HCN55_RS13805 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HCN55_RS13805 PF01488 Shikimate / quinate 5-dehydrogenase HCN55_RS13805 PF08501 Shikimate dehydrogenase substrate binding domain HCN55_RS13810 PF01926 50S ribosome-binding GTPase HCN55_RS13820 PF08970 Sporulation inhibitor A HCN55_RS13825 PF00657 GDSL-like Lipase/Acylhydrolase HCN55_RS13830 PF01471 Putative peptidoglycan binding domain HCN55_RS13830 PF01510 N-acetylmuramoyl-L-alanine amidase HCN55_RS13835 PF09335 SNARE associated Golgi protein HCN55_RS13840 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCN55_RS13840 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HCN55_RS13850 PF14040 Deoxyribonuclease NucA/NucB HCN55_RS13860 PF07508 Recombinase HCN55_RS13860 PF13408 Recombinase zinc beta ribbon domain HCN55_RS13860 PF00239 Resolvase, N terminal domain HCN55_RS13865 PF01451 Low molecular weight phosphotyrosine protein phosphatase HCN55_RS13870 PF01758 Sodium Bile acid symporter family HCN55_RS13875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_RS13880 PF01022 Bacterial regulatory protein, arsR family HCN55_RS13885 PF08892 YqcI/YcgG family HCN55_RS13890 PF13181 Tetratricopeptide repeat HCN55_RS13890 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_RS13905 PF14449 Pre-toxin TG HCN55_RS13905 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues HCN55_RS13905 PF04740 LXG domain of WXG superfamily HCN55_RS13910 PF05076 Suppressor of fused protein (SUFU) HCN55_RS13930 PF01510 N-acetylmuramoyl-L-alanine amidase HCN55_RS13930 PF01471 Putative peptidoglycan binding domain HCN55_RS13935 PF05105 Bacteriophage holin family HCN55_RS13945 PF09693 Phage uncharacterised protein (Phage_XkdX) HCN55_RS13950 PF09636 XkdW protein HCN55_RS13965 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) HCN55_RS13970 PF04865 Baseplate J-like protein HCN55_RS13975 PF10934 Protein of unknown function (DUF2634) HCN55_RS13980 PF10844 Protein of unknown function (DUF2577) HCN55_RS13990 PF01476 LysM domain HCN55_RS13995 PF01464 Transglycosylase SLT domain HCN55_RS14005 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC HCN55_RS14020 PF09393 Phage tail tube protein HCN55_RS14025 PF17482 Phage tail sheath C-terminal domain HCN55_RS14025 PF04984 Phage tail sheath protein subtilisin-like domain HCN55_RS14025 PF17481 Phage tail sheath protein beta-sandwich domain HCN55_RS14040 PF04883 Bacteriophage HK97-gp10, putative tail-component HCN55_RS14045 PF12206 Domain of unknown function (DUF3599) HCN55_RS14050 PF11436 Protein of unknown function (DUF3199) HCN55_RS14055 PF14553 YqbF, hypothetical protein domain HCN55_RS14060 PF05065 Phage capsid family HCN55_RS14065 PF14550 Putative phage serine protease XkdF HCN55_RS14075 PF04233 Phage Mu protein F like protein HCN55_RS14080 PF04860 Phage portal protein HCN55_RS14085 PF04466 Phage terminase large subunit HCN55_RS14085 PF17288 Terminase RNAseH like domain HCN55_RS14090 PF10668 Phage terminase small subunit HCN55_RS14110 PF17356 Phage-like element PBSX protein XtrA HCN55_RS14115 PF05866 Endodeoxyribonuclease RusA HCN55_RS14125 PF01695 IstB-like ATP binding protein HCN55_RS14130 PF07261 Replication initiation and membrane attachment HCN55_RS14135 PF03837 RecT family HCN55_RS14140 PF09588 YqaJ-like viral recombinase domain HCN55_RS14145 PF09466 Hypothetical protein Yqai HCN55_RS14155 PF17448 Uncharacterized YqaH-like HCN55_RS14160 PF01381 Helix-turn-helix HCN55_RS14170 PF01381 Helix-turn-helix HCN55_RS14175 PF01381 Helix-turn-helix HCN55_RS14190 PF06114 IrrE N-terminal-like domain HCN55_RS14215 PF06146 Phosphate-starvation-inducible E HCN55_RS14220 PF00512 His Kinase A (phospho-acceptor) domain HCN55_RS14225 PF00072 Response regulator receiver domain HCN55_RS14225 PF00486 Transcriptional regulatory protein, C terminal HCN55_RS14230 PF04235 Protein of unknown function (DUF418) HCN55_RS14240 PF00583 Acetyltransferase (GNAT) family HCN55_RS14245 PF02525 Flavodoxin-like fold HCN55_RS14250 PF13787 Protein of unknown function with HXXEE motif HCN55_RS14255 PF01925 Sulfite exporter TauE/SafE HCN55_RS14260 PF01206 Sulfurtransferase TusA HCN55_RS14265 PF00753 Metallo-beta-lactamase superfamily HCN55_RS14265 PF00581 Rhodanese-like domain HCN55_RS14275 PF00581 Rhodanese-like domain HCN55_RS14275 PF01206 Sulfurtransferase TusA HCN55_RS14285 PF13686 DsrE/DsrF/DrsH-like family HCN55_RS14290 PF02583 Metal-sensitive transcriptional repressor HCN55_RS14295 PF07883 Cupin domain HCN55_RS14305 PF06445 GyrI-like small molecule binding domain HCN55_RS14305 PF13411 MerR HTH family regulatory protein HCN55_RS14310 PF07690 Major Facilitator Superfamily HCN55_RS14315 PF00583 Acetyltransferase (GNAT) family HCN55_RS14320 PF03471 Transporter associated domain HCN55_RS14320 PF00571 CBS domain HCN55_RS14320 PF01595 Cyclin M transmembrane N-terminal domain HCN55_RS14325 PF14142 YrzO-like protein HCN55_RS14330 PF00892 EamA-like transporter family HCN55_RS14335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS14335 PF03466 LysR substrate binding domain HCN55_RS14345 PF16916 Dimerisation domain of Zinc Transporter HCN55_RS14345 PF01545 Cation efflux family HCN55_RS14350 PF14552 Tautomerase enzyme HCN55_RS14355 PF03466 LysR substrate binding domain HCN55_RS14355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS14365 PF05525 Branched-chain amino acid transport protein HCN55_RS14370 PF05437 Branched-chain amino acid transport protein (AzlD) HCN55_RS14375 PF03591 AzlC protein HCN55_RS14380 PF01037 Lrp/AsnC ligand binding domain HCN55_RS14385 PF01337 Barstar (barnase inhibitor) HCN55_RS14390 PF00067 Cytochrome P450 HCN55_RS14400 PF00857 Isochorismatase family HCN55_RS14405 PF10823 Protein of unknown function (DUF2568) HCN55_RS14415 PF05163 DinB family HCN55_RS14420 PF04439 Streptomycin adenylyltransferase HCN55_RS14425 PF03060 Nitronate monooxygenase HCN55_RS14430 PF01177 Asp/Glu/Hydantoin racemase HCN55_RS14435 PF15493 Domain of unknown function, YrpD HCN55_RS14440 PF09680 Family of unknown function HCN55_RS14450 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment HCN55_RS14455 PF08281 Sigma-70, region 4 HCN55_RS14455 PF04542 Sigma-70 region 2 HCN55_RS14460 PF00248 Aldo/keto reductase family HCN55_RS14465 PF03600 Citrate transporter HCN55_RS14470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS14470 PF03466 LysR substrate binding domain HCN55_RS14475 PF04303 PrpF protein HCN55_RS14480 PF01374 Glycosyl hydrolase family 46 HCN55_RS14490 PF00561 alpha/beta hydrolase fold HCN55_RS14510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_RS14520 PF07875 Coat F domain HCN55_RS14525 PF08240 Alcohol dehydrogenase GroES-like domain HCN55_RS14525 PF13823 Alcohol dehydrogenase GroES-associated HCN55_RS14525 PF00107 Zinc-binding dehydrogenase HCN55_RS14535 PF07875 Coat F domain HCN55_RS14540 PF13411 MerR HTH family regulatory protein HCN55_RS14550 PF00107 Zinc-binding dehydrogenase HCN55_RS14550 PF08240 Alcohol dehydrogenase GroES-like domain HCN55_RS14555 PF01965 DJ-1/PfpI family HCN55_RS14560 PF00251 Glycosyl hydrolases family 32 N-terminal domain HCN55_RS14560 PF08244 Glycosyl hydrolases family 32 C terminal HCN55_RS14565 PF03613 PTS system mannose/fructose/sorbose family IID component HCN55_RS14570 PF03609 PTS system sorbose-specific iic component HCN55_RS14575 PF03830 PTS system sorbose subfamily IIB component HCN55_RS14580 PF03610 PTS system fructose IIA component HCN55_RS14585 PF00874 PRD domain HCN55_RS14585 PF00158 Sigma-54 interaction domain HCN55_RS14585 PF03610 PTS system fructose IIA component HCN55_RS14595 PF00324 Amino acid permease HCN55_RS14600 PF01810 LysE type translocator HCN55_RS14605 PF11495 Archaeal transcriptional regulator TrmB HCN55_RS14605 PF01978 Sugar-specific transcriptional regulator TrmB HCN55_RS14610 PF04542 Sigma-70 region 2 HCN55_RS14610 PF08281 Sigma-70, region 4 HCN55_RS14615 PF11738 Protein of unknown function (DUF3298) HCN55_RS14615 PF13739 Deacetylase PdaC HCN55_RS14620 PF01757 Acyltransferase family HCN55_RS14625 PF14145 YrhK-like protein HCN55_RS14630 PF00067 Cytochrome P450 HCN55_RS14630 PF00175 Oxidoreductase NAD-binding domain HCN55_RS14630 PF00258 Flavodoxin HCN55_RS14630 PF00667 FAD binding domain HCN55_RS14635 PF16295 Tetracyclin repressor-like, C-terminal domain HCN55_RS14635 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS14640 PF08241 Methyltransferase domain HCN55_RS14650 PF09501 Probable sporulation protein (Bac_small_yrzI) HCN55_RS14655 PF01226 Formate/nitrite transporter HCN55_RS14660 PF10057 Uncharacterized conserved protein (DUF2294) HCN55_RS14665 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCN55_RS14665 PF01568 Molydopterin dinucleotide binding domain HCN55_RS14665 PF00384 Molybdopterin oxidoreductase HCN55_RS14665 PF00037 4Fe-4S binding domain HCN55_RS14665 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HCN55_RS14670 PF07849 Protein of unknown function (DUF1641) HCN55_RS14675 PF14143 YrhC-like protein HCN55_RS14680 PF01053 Cys/Met metabolism PLP-dependent enzyme HCN55_RS14685 PF00291 Pyridoxal-phosphate dependent enzyme HCN55_RS14690 PF01048 Phosphorylase superfamily HCN55_RS14695 PF13649 Methyltransferase domain HCN55_RS14700 PF10750 Protein of unknown function (DUF2536) HCN55_RS14705 PF07423 Domain of unknown function (DUF1510) HCN55_RS14710 PF00905 Penicillin binding protein transpeptidase domain HCN55_RS14710 PF03717 Penicillin-binding Protein dimerisation domain HCN55_RS14715 PF03449 Transcription elongation factor, N-terminal HCN55_RS14715 PF01272 Transcription elongation factor, GreA/GreB, C-term HCN55_RS14720 PF00485 Phosphoribulokinase / Uridine kinase family HCN55_RS14735 PF01596 O-methyltransferase HCN55_RS14740 PF02618 YceG-like family HCN55_RS14745 PF06949 Protein of unknown function (DUF1292) HCN55_RS14750 PF03652 Holliday junction resolvase HCN55_RS14755 PF06135 IreB regulatory phosphoprotein HCN55_RS14760 PF01411 tRNA synthetases class II (A) HCN55_RS14760 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HCN55_RS14760 PF02272 DHHA1 domain HCN55_RS14765 PF01594 AI-2E family transporter HCN55_RS14770 PF00005 ABC transporter HCN55_RS14775 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCN55_RS14780 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS14785 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS14790 PF13056 Protein of unknown function (DUF3918) HCN55_RS14800 PF05239 PRC-barrel domain HCN55_RS14805 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain HCN55_RS14805 PF14490 Helix-hairpin-helix containing domain HCN55_RS14805 PF13538 UvrD-like helicase C-terminal domain HCN55_RS14810 PF13181 Tetratricopeptide repeat HCN55_RS14810 PF07719 Tetratricopeptide repeat HCN55_RS14820 PF00266 Aminotransferase class-V HCN55_RS14825 PF02082 Transcriptional regulator HCN55_RS14830 PF16193 AAA C-terminal domain HCN55_RS14830 PF12002 MgsA AAA+ ATPase C terminal HCN55_RS14830 PF05496 Holliday junction DNA helicase RuvB P-loop domain HCN55_RS14835 PF00899 ThiF family HCN55_RS14845 PF02938 GAD domain HCN55_RS14845 PF00152 tRNA synthetases class II (D, K and N) HCN55_RS14845 PF01336 OB-fold nucleic acid binding domain HCN55_RS14850 PF13393 Histidyl-tRNA synthetase HCN55_RS14850 PF03129 Anticodon binding domain HCN55_RS14855 PF17449 Uncharacterized YrzK-like HCN55_RS14860 PF08239 Bacterial SH3 domain HCN55_RS14860 PF01520 N-acetylmuramoyl-L-alanine amidase HCN55_RS14865 PF02580 D-Tyr-tRNA(Tyr) deacylase HCN55_RS14870 PF13291 ACT domain HCN55_RS14870 PF04607 Region found in RelA / SpoT proteins HCN55_RS14870 PF02824 TGS domain HCN55_RS14875 PF00156 Phosphoribosyl transferase domain HCN55_RS14880 PF02272 DHHA1 domain HCN55_RS14880 PF01368 DHH family HCN55_RS14880 PF17768 RecJ OB domain HCN55_RS14880 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HCN55_RS14885 PF06305 Lipopolysaccharide assembly protein A domain HCN55_RS14890 PF02080 TrkA-C domain HCN55_RS14895 PF02355 Protein export membrane protein HCN55_RS14895 PF07549 SecD/SecF GG Motif HCN55_RS14900 PF13797 Post-transcriptional regulator HCN55_RS14905 PF14667 Polysaccharide biosynthesis C-terminal domain HCN55_RS14905 PF01943 Polysaccharide biosynthesis protein HCN55_RS14910 PF04239 Protein of unknown function (DUF421) HCN55_RS14915 PF12670 Protein of unknown function (DUF3792) HCN55_RS14920 PF02699 Preprotein translocase subunit HCN55_RS14925 PF01702 Queuine tRNA-ribosyltransferase HCN55_RS14930 PF02547 Queuosine biosynthesis protein HCN55_RS14935 PF11146 Protein of unknown function (DUF2905) HCN55_RS14940 PF05491 RuvB C-terminal winged helix domain HCN55_RS14940 PF05496 Holliday junction DNA helicase RuvB P-loop domain HCN55_RS14940 PF17864 RuvB AAA lid domain HCN55_RS14945 PF01330 RuvA N terminal domain HCN55_RS14945 PF07499 RuvA, C-terminal domain HCN55_RS14950 PF08955 BofC C-terminal domain HCN55_RS14950 PF08977 Bypass of Forespore C, N terminal HCN55_RS14955 PF07690 Major Facilitator Superfamily HCN55_RS14960 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCN55_RS14960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCN55_RS14985 PF01235 Sodium:alanine symporter family HCN55_RS14990 PF01709 Transcriptional regulator HCN55_RS14995 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) HCN55_RS15000 PF01476 LysM domain HCN55_RS15005 PF02445 Quinolinate synthetase A protein HCN55_RS15010 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HCN55_RS15010 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HCN55_RS15015 PF00890 FAD binding domain HCN55_RS15015 PF02910 Fumarate reductase flavoprotein C-term HCN55_RS15020 PF00266 Aminotransferase class-V HCN55_RS15025 PF02829 3H domain HCN55_RS15025 PF08279 HTH domain HCN55_RS15030 PF01842 ACT domain HCN55_RS15030 PF00800 Prephenate dehydratase HCN55_RS15035 PF01842 ACT domain HCN55_RS15040 PF01018 GTP1/OBG HCN55_RS15040 PF01926 50S ribosome-binding GTPase HCN55_RS15040 PF09269 Domain of unknown function (DUF1967) HCN55_RS15045 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HCN55_RS15045 PF14682 Sporulation initiation phospho-transferase B, C-terminal HCN55_RS15055 PF01016 Ribosomal L27 protein HCN55_RS15060 PF04327 Cysteine protease Prp HCN55_RS15065 PF00829 Ribosomal prokaryotic L21 protein HCN55_RS15070 PF02163 Peptidase family M50 HCN55_RS15075 PF01551 Peptidase family M23 HCN55_RS15080 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HCN55_RS15085 PF03775 Septum formation inhibitor MinC, C-terminal domain HCN55_RS15090 PF04093 rod shape-determining protein MreD HCN55_RS15095 PF04085 rod shape-determining protein MreC HCN55_RS15105 PF04002 RadC-like JAB domain HCN55_RS15105 PF00633 Helix-hairpin-helix motif HCN55_RS15110 PF02545 Maf-like protein HCN55_RS15115 PF05036 Sporulation related domain HCN55_RS15120 PF06750 Bacterial Peptidase A24 N-terminal domain HCN55_RS15120 PF01478 Type IV leader peptidase family HCN55_RS15125 PF02875 Mur ligase family, glutamate ligase domain HCN55_RS15125 PF08245 Mur ligase middle domain HCN55_RS15130 PF08264 Anticodon-binding domain of tRNA HCN55_RS15130 PF10458 Valyl tRNA synthetase tRNA binding arm HCN55_RS15130 PF00133 tRNA synthetases class I (I, L, M and V) HCN55_RS15145 PF01476 LysM domain HCN55_RS15150 PF00202 Aminotransferase class-III HCN55_RS15155 PF00490 Delta-aminolevulinic acid dehydratase HCN55_RS15160 PF02602 Uroporphyrinogen-III synthase HemD HCN55_RS15165 PF03900 Porphobilinogen deaminase, C-terminal domain HCN55_RS15165 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HCN55_RS15170 PF01578 Cytochrome C assembly protein HCN55_RS15175 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HCN55_RS15175 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HCN55_RS15175 PF01488 Shikimate / quinate 5-dehydrogenase HCN55_RS15185 PF01926 50S ribosome-binding GTPase HCN55_RS15190 PF00004 ATPase family associated with various cellular activities (AAA) HCN55_RS15190 PF05362 Lon protease (S16) C-terminal proteolytic domain HCN55_RS15190 PF02190 ATP-dependent protease La (LON) substrate-binding domain HCN55_RS15195 PF00004 ATPase family associated with various cellular activities (AAA) HCN55_RS15195 PF05362 Lon protease (S16) C-terminal proteolytic domain HCN55_RS15200 PF07724 AAA domain (Cdc48 subfamily) HCN55_RS15200 PF10431 C-terminal, D2-small domain, of ClpB protein HCN55_RS15200 PF06689 ClpX C4-type zinc finger HCN55_RS15205 PF05697 Bacterial trigger factor protein (TF) HCN55_RS15205 PF05698 Bacterial trigger factor protein (TF) C-terminus HCN55_RS15205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HCN55_RS15215 PF00694 Aconitase C-terminal domain HCN55_RS15220 PF00330 Aconitase family (aconitate hydratase) HCN55_RS15225 PF00180 Isocitrate/isopropylmalate dehydrogenase HCN55_RS15230 PF00682 HMGL-like HCN55_RS15230 PF08502 LeuA allosteric (dimerisation) domain HCN55_RS15235 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HCN55_RS15235 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HCN55_RS15240 PF10369 Small subunit of acetolactate synthase HCN55_RS15240 PF01842 ACT domain HCN55_RS15245 PF00205 Thiamine pyrophosphate enzyme, central domain HCN55_RS15245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCN55_RS15245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCN55_RS15255 PF00583 Acetyltransferase (GNAT) family HCN55_RS15260 PF11181 Heat induced stress protein YflT HCN55_RS15260 PF09557 Domain of unknown function (DUF2382) HCN55_RS15270 PF12850 Calcineurin-like phosphoesterase superfamily domain HCN55_RS15275 PF01725 Ham1 family HCN55_RS15280 PF01138 3' exoribonuclease family, domain 1 HCN55_RS15280 PF03725 3' exoribonuclease family, domain 2 HCN55_RS15285 PF10646 Sporulation and spore germination HCN55_RS15290 PF01177 Asp/Glu/Hydantoin racemase HCN55_RS15295 PF01047 MarR family HCN55_RS15300 PF00196 Bacterial regulatory proteins, luxR family HCN55_RS15305 PF03061 Thioesterase superfamily HCN55_RS15310 PF13183 4Fe-4S dicluster domain HCN55_RS15310 PF13085 2Fe-2S iron-sulfur cluster binding domain HCN55_RS15315 PF00890 FAD binding domain HCN55_RS15315 PF02910 Fumarate reductase flavoprotein C-term HCN55_RS15320 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HCN55_RS15325 PF10702 Protein of unknown function (DUF2507) HCN55_RS15330 PF01842 ACT domain HCN55_RS15330 PF13840 ACT domain HCN55_RS15330 PF00696 Amino acid kinase family HCN55_RS15335 PF08459 UvrC Helix-hairpin-helix N-terminal HCN55_RS15335 PF02151 UvrB/uvrC motif HCN55_RS15335 PF01541 GIY-YIG catalytic domain HCN55_RS15340 PF00085 Thioredoxin HCN55_RS15345 PF06964 Alpha-L-arabinofuranosidase C-terminal domain HCN55_RS15350 PF01012 Electron transfer flavoprotein domain HCN55_RS15350 PF00766 Electron transfer flavoprotein FAD-binding domain HCN55_RS15355 PF01012 Electron transfer flavoprotein domain HCN55_RS15360 PF00378 Enoyl-CoA hydratase/isomerase HCN55_RS15365 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS15365 PF08359 YsiA-like protein, C-terminal region HCN55_RS15370 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS15370 PF00501 AMP-binding enzyme HCN55_RS15375 PF03994 Domain of Unknown Function (DUF350) HCN55_RS15380 PF01713 Smr domain HCN55_RS15380 PF00488 MutS domain V HCN55_RS15385 PF14791 DNA polymerase beta thumb HCN55_RS15385 PF14716 Helix-hairpin-helix domain HCN55_RS15385 PF02811 PHP domain HCN55_RS15390 PF02674 Colicin V production protein HCN55_RS15395 PF05164 Cell division protein ZapA HCN55_RS15400 PF11858 Domain of unknown function (DUF3378) HCN55_RS15400 PF01351 Ribonuclease HII HCN55_RS15405 PF03484 tRNA synthetase B5 domain HCN55_RS15405 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HCN55_RS15405 PF01588 Putative tRNA binding domain HCN55_RS15405 PF03147 Ferredoxin-fold anticodon binding domain HCN55_RS15405 PF03483 B3/4 domain HCN55_RS15410 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HCN55_RS15410 PF01409 tRNA synthetases class II core domain (F) HCN55_RS15420 PF00588 SpoU rRNA Methylase family HCN55_RS15420 PF08032 RNA 2'-O ribose methyltransferase substrate binding HCN55_RS15425 PF14098 Small, acid-soluble spore protein I HCN55_RS15430 PF17853 GGDEF-like domain HCN55_RS15430 PF05651 Putative sugar diacid recognition HCN55_RS15430 PF13556 PucR C-terminal helix-turn-helix domain HCN55_RS15435 PF01565 FAD binding domain HCN55_RS15435 PF02913 FAD linked oxidases, C-terminal domain HCN55_RS15440 PF13183 4Fe-4S dicluster domain HCN55_RS15440 PF02754 Cysteine-rich domain HCN55_RS15445 PF12681 Glyoxalase-like domain HCN55_RS15455 PF02554 Carbon starvation protein CstA HCN55_RS15455 PF13722 5TM C-terminal transporter carbon starvation CstA HCN55_RS15460 PF06964 Alpha-L-arabinofuranosidase C-terminal domain HCN55_RS15465 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS15470 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS15475 PF01547 Bacterial extracellular solute-binding protein HCN55_RS15480 PF13685 Iron-containing alcohol dehydrogenase HCN55_RS15485 PF13344 Haloacid dehalogenase-like hydrolase HCN55_RS15490 PF00596 Class II Aldolase and Adducin N-terminal domain HCN55_RS15495 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCN55_RS15495 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCN55_RS15500 PF11762 L-arabinose isomerase C-terminal domain HCN55_RS15500 PF02610 L-arabinose isomerase HCN55_RS15505 PF04616 Glycosyl hydrolases family 43 HCN55_RS15510 PF05343 M42 glutamyl aminopeptidase HCN55_RS15520 PF06961 Protein of unknown function (DUF1294) HCN55_RS15525 PF00453 Ribosomal protein L20 HCN55_RS15530 PF01632 Ribosomal protein L35 HCN55_RS15535 PF05198 Translation initiation factor IF-3, N-terminal domain HCN55_RS15535 PF00707 Translation initiation factor IF-3, C-terminal domain HCN55_RS15545 PF04172 LrgB-like family HCN55_RS15550 PF03788 LrgA family HCN55_RS15555 PF00072 Response regulator receiver domain HCN55_RS15555 PF04397 LytTr DNA-binding domain HCN55_RS15560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS15560 PF07694 5TMR of 5TMR-LYT HCN55_RS15560 PF06580 Histidine kinase HCN55_RS15565 PF13419 Haloacid dehalogenase-like hydrolase HCN55_RS15570 PF02824 TGS domain HCN55_RS15570 PF03129 Anticodon binding domain HCN55_RS15570 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HCN55_RS15570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HCN55_RS15575 PF08812 YtxC-like family HCN55_RS15580 PF09335 SNARE associated Golgi protein HCN55_RS15585 PF01695 IstB-like ATP binding protein HCN55_RS15585 PF07319 Primosomal protein DnaI N-terminus HCN55_RS15590 PF07261 Replication initiation and membrane attachment HCN55_RS15595 PF03477 ATP cone domain HCN55_RS15600 PF02675 S-adenosylmethionine decarboxylase HCN55_RS15605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HCN55_RS15605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HCN55_RS15610 PF01638 HxlR-like helix-turn-helix HCN55_RS15615 PF07690 Major Facilitator Superfamily HCN55_RS15620 PF00248 Aldo/keto reductase family HCN55_RS15625 PF01121 Dephospho-CoA kinase HCN55_RS15630 PF02659 Putative manganese efflux pump HCN55_RS15635 PF06827 Zinc finger found in FPG and IleRS HCN55_RS15635 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HCN55_RS15635 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HCN55_RS15640 PF00476 DNA polymerase family A HCN55_RS15640 PF01367 5'-3' exonuclease, C-terminal SAM fold HCN55_RS15640 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HCN55_RS15645 PF00989 PAS fold HCN55_RS15645 PF00512 His Kinase A (phospho-acceptor) domain HCN55_RS15645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS15645 PF16736 Single Cache-like HCN55_RS15650 PF00072 Response regulator receiver domain HCN55_RS15650 PF00486 Transcriptional regulatory protein, C terminal HCN55_RS15655 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HCN55_RS15655 PF00056 lactate/malate dehydrogenase, NAD binding domain HCN55_RS15660 PF00180 Isocitrate/isopropylmalate dehydrogenase HCN55_RS15665 PF00285 Citrate synthase, C-terminal domain HCN55_RS15670 PF04284 Protein of unknown function (DUF441) HCN55_RS15675 PF01594 AI-2E family transporter HCN55_RS15680 PF04186 FxsA cytoplasmic membrane protein HCN55_RS15685 PF02887 Pyruvate kinase, alpha/beta domain HCN55_RS15685 PF00391 PEP-utilising enzyme, mobile domain HCN55_RS15685 PF00224 Pyruvate kinase, barrel domain HCN55_RS15690 PF00365 Phosphofructokinase HCN55_RS15695 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HCN55_RS15700 PF01039 Carboxyl transferase domain HCN55_RS15700 PF17848 Acetyl-coA carboxylase zinc finger domain HCN55_RS15705 PF00390 Malic enzyme, N-terminal domain HCN55_RS15705 PF03949 Malic enzyme, NAD binding domain HCN55_RS15710 PF07733 Bacterial DNA polymerase III alpha NTPase domain HCN55_RS15710 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HCN55_RS15710 PF14579 Helix-hairpin-helix motif HCN55_RS15710 PF02811 PHP domain HCN55_RS15710 PF01336 OB-fold nucleic acid binding domain HCN55_RS15715 PF14034 Sporulation protein YtrH HCN55_RS15730 PF01368 DHH family HCN55_RS15730 PF02272 DHHA1 domain HCN55_RS15735 PF14007 YtpI-like protein HCN55_RS15740 PF03061 Thioesterase superfamily HCN55_RS15740 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS15740 PF00571 CBS domain HCN55_RS15740 PF07085 DRTGG domain HCN55_RS15745 PF01925 Sulfite exporter TauE/SafE HCN55_RS15750 PF01546 Peptidase family M20/M25/M40 HCN55_RS15750 PF07687 Peptidase dimerisation domain HCN55_RS15755 PF01687 Riboflavin kinase HCN55_RS15760 PF00296 Luciferase-like monooxygenase HCN55_RS15765 PF00462 Glutaredoxin HCN55_RS15770 PF00296 Luciferase-like monooxygenase HCN55_RS15775 PF00005 ABC transporter HCN55_RS15780 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS15785 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS15790 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCN55_RS15795 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCN55_RS15800 PF00583 Acetyltransferase (GNAT) family HCN55_RS15805 PF03466 LysR substrate binding domain HCN55_RS15805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS15820 PF14698 Argininosuccinate lyase C-terminal HCN55_RS15820 PF00206 Lyase HCN55_RS15825 PF00764 Arginosuccinate synthase HCN55_RS15830 PF00994 Probable molybdopterin binding domain HCN55_RS15835 PF00871 Acetokinase family HCN55_RS15845 PF02384 N-6 DNA Methylase HCN55_RS15850 PF08534 Redoxin HCN55_RS15855 PF09579 Sporulation protein YtfJ (Spore_YtfJ) HCN55_RS15860 PF11167 Protein of unknown function (DUF2953) HCN55_RS15865 PF06271 RDD family HCN55_RS15870 PF01343 Peptidase family S49 HCN55_RS15875 PF01513 ATP-NAD kinase HCN55_RS15880 PF07969 Amidohydrolase family HCN55_RS15885 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS15885 PF00501 AMP-binding enzyme HCN55_RS15890 PF00269 Small, acid-soluble spore proteins, alpha/beta type HCN55_RS15895 PF02568 Thiamine biosynthesis protein (ThiI) HCN55_RS15895 PF02926 THUMP domain HCN55_RS15900 PF00266 Aminotransferase class-V HCN55_RS15905 PF05525 Branched-chain amino acid transport protein HCN55_RS15910 PF06160 Septation ring formation regulator, EzrA HCN55_RS15915 PF02811 PHP domain HCN55_RS15920 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS15925 PF13185 GAF domain HCN55_RS15930 PF00990 Diguanylate cyclase, GGDEF domain HCN55_RS15940 PF01479 S4 domain HCN55_RS15940 PF00163 Ribosomal protein S4/S9 N-terminal domain HCN55_RS15945 PF00579 tRNA synthetases class I (W and Y) HCN55_RS15945 PF01479 S4 domain HCN55_RS15950 PF00501 AMP-binding enzyme HCN55_RS15950 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS15955 PF00583 Acetyltransferase (GNAT) family HCN55_RS15960 PF00571 CBS domain HCN55_RS15965 PF00850 Histone deacetylase domain HCN55_RS15970 PF13677 Membrane MotB of proton-channel complex MotA/MotB HCN55_RS15970 PF00691 OmpA family HCN55_RS15975 PF01618 MotA/TolQ/ExbB proton channel family HCN55_RS15980 PF00356 Bacterial regulatory proteins, lacI family HCN55_RS15985 PF00793 DAHP synthetase I family HCN55_RS15985 PF01817 Chorismate mutase type II HCN55_RS15990 PF11009 Protein of unknown function (DUF2847) HCN55_RS15995 PF12732 YtxH-like protein HCN55_RS16000 PF06103 Bacterial protein of unknown function (DUF948) HCN55_RS16005 PF02875 Mur ligase family, glutamate ligase domain HCN55_RS16005 PF01225 Mur ligase family, catalytic domain HCN55_RS16005 PF08245 Mur ligase middle domain HCN55_RS16010 PF17854 FtsK alpha domain HCN55_RS16010 PF01580 FtsK/SpoIIIE family HCN55_RS16010 PF09397 Ftsk gamma domain HCN55_RS16015 PF14794 Domain of unknown function (DUF4479) HCN55_RS16015 PF01588 Putative tRNA binding domain HCN55_RS16020 PF07285 Protein of unknown function (DUF1444) HCN55_RS16025 PF00085 Thioredoxin HCN55_RS16035 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ HCN55_RS16040 PF05343 M42 glutamyl aminopeptidase HCN55_RS16045 PF03413 Peptidase propeptide and YPEB domain HCN55_RS16050 PF00390 Malic enzyme, N-terminal domain HCN55_RS16050 PF03949 Malic enzyme, NAD binding domain HCN55_RS16055 PF00753 Metallo-beta-lactamase superfamily HCN55_RS16060 PF02390 Putative methyltransferase HCN55_RS16065 PF14165 YtzH-like protein HCN55_RS16070 PF01636 Phosphotransferase enzyme family HCN55_RS16075 PF17999 Pullulanase N1-terminal domain HCN55_RS16075 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HCN55_RS16075 PF00128 Alpha amylase, catalytic domain HCN55_RS16080 PF00781 Diacylglycerol kinase catalytic domain HCN55_RS16095 PF00291 Pyridoxal-phosphate dependent enzyme HCN55_RS16100 PF01546 Peptidase family M20/M25/M40 HCN55_RS16105 PF00860 Permease family HCN55_RS16110 PF05975 Bacterial ABC transporter protein EcsB HCN55_RS16115 PF00005 ABC transporter HCN55_RS16120 PF08220 DeoR-like helix-turn-helix domain HCN55_RS16125 PF00849 RNA pseudouridylate synthase HCN55_RS16125 PF01479 S4 domain HCN55_RS16130 PF01943 Polysaccharide biosynthesis protein HCN55_RS16130 PF14667 Polysaccharide biosynthesis C-terminal domain HCN55_RS16140 PF02028 BCCT, betaine/carnitine/choline family transporter HCN55_RS16145 PF10957 Sporulation protein Cse60 HCN55_RS16150 PF04854 Protein of unknown function, DUF624 HCN55_RS16155 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCN55_RS16155 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCN55_RS16165 PF07470 Glycosyl Hydrolase Family 88 HCN55_RS16185 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS16190 PF17853 GGDEF-like domain HCN55_RS16190 PF12833 Helix-turn-helix domain HCN55_RS16195 PF13416 Bacterial extracellular solute-binding protein HCN55_RS16200 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS16205 PF01370 NAD dependent epimerase/dehydratase family HCN55_RS16210 PF00067 Cytochrome P450 HCN55_RS16215 PF04055 Radical SAM superfamily HCN55_RS16215 PF06968 Biotin and Thiamin Synthesis associated domain HCN55_RS16225 PF00155 Aminotransferase class I and II HCN55_RS16230 PF00202 Aminotransferase class-III HCN55_RS16235 PF03744 6-carboxyhexanoate--CoA ligase HCN55_RS16240 PF01738 Dienelactone hydrolase family HCN55_RS16245 PF00356 Bacterial regulatory proteins, lacI family HCN55_RS16250 PF01547 Bacterial extracellular solute-binding protein HCN55_RS16255 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS16260 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS16265 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCN55_RS16265 PF02056 Family 4 glycosyl hydrolase HCN55_RS16270 PF00581 Rhodanese-like domain HCN55_RS16275 PF00133 tRNA synthetases class I (I, L, M and V) HCN55_RS16275 PF13603 Leucyl-tRNA synthetase, Domain 2 HCN55_RS16275 PF09334 tRNA synthetases class I (M) HCN55_RS16275 PF08264 Anticodon-binding domain of tRNA HCN55_RS16280 PF14074 Protein of unknown function (DUF4257) HCN55_RS16285 PF01740 STAS domain HCN55_RS16285 PF13426 PAS domain HCN55_RS16290 PF07690 Major Facilitator Superfamily HCN55_RS16295 PF04791 LMBR1-like membrane protein HCN55_RS16300 PF02687 FtsX-like permease family HCN55_RS16305 PF00005 ABC transporter HCN55_RS16310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS16315 PF00486 Transcriptional regulatory protein, C terminal HCN55_RS16315 PF00072 Response regulator receiver domain HCN55_RS16320 PF12704 MacB-like periplasmic core domain HCN55_RS16320 PF02687 FtsX-like permease family HCN55_RS16325 PF00005 ABC transporter HCN55_RS16340 PF00005 ABC transporter HCN55_RS16345 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS16355 PF10732 Protein of unknown function (DUF2524) HCN55_RS16360 PF04055 Radical SAM superfamily HCN55_RS16360 PF16199 Radical_SAM C-terminal domain HCN55_RS16365 PF06962 Putative rRNA methylase HCN55_RS16370 PF10776 Protein of unknown function (DUF2600) HCN55_RS16375 PF12146 Serine aminopeptidase, S33 HCN55_RS16380 PF00132 Bacterial transferase hexapeptide (six repeats) HCN55_RS16385 PF00324 Amino acid permease HCN55_RS16390 PF13537 Glutamine amidotransferase domain HCN55_RS16390 PF00733 Asparagine synthase HCN55_RS16400 PF01293 Phosphoenolpyruvate carboxykinase HCN55_RS16405 PF10763 Protein of unknown function (DUF2584) HCN55_RS16410 PF00326 Prolyl oligopeptidase family HCN55_RS16420 PF00005 ABC transporter HCN55_RS16425 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS16430 PF00293 NUDIX domain HCN55_RS16435 PF05105 Bacteriophage holin family HCN55_RS16440 PF00210 Ferritin-like domain HCN55_RS16450 PF13115 YtkA-like HCN55_RS16455 PF02664 S-Ribosylhomocysteinase (LuxS) HCN55_RS16460 PF01809 Putative membrane protein insertion efficiency factor HCN55_RS16465 PF00484 Carbonic anhydrase HCN55_RS16470 PF01197 Ribosomal protein L31 HCN55_RS16475 PF01654 Cytochrome bd terminal oxidase subunit I HCN55_RS16480 PF02322 Cytochrome bd terminal oxidase subunit II HCN55_RS16485 PF07561 Domain of Unknown Function (DUF1540) HCN55_RS16490 PF00950 ABC 3 transport family HCN55_RS16495 PF00950 ABC 3 transport family HCN55_RS16500 PF00005 ABC transporter HCN55_RS16505 PF01297 Zinc-uptake complex component A periplasmic HCN55_RS16510 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HCN55_RS16510 PF13378 Enolase C-terminal domain-like HCN55_RS16515 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS16515 PF00501 AMP-binding enzyme HCN55_RS16520 PF00378 Enoyl-CoA hydratase/isomerase HCN55_RS16525 PF00561 alpha/beta hydrolase fold HCN55_RS16530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCN55_RS16530 PF16582 Middle domain of thiamine pyrophosphate HCN55_RS16530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCN55_RS16535 PF00425 chorismate binding enzyme HCN55_RS16540 PF01258 Prokaryotic dksA/traR C4-type zinc finger HCN55_RS16545 PF00483 Nucleotidyl transferase HCN55_RS16550 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HCN55_RS16550 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HCN55_RS16550 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HCN55_RS16555 PF01370 NAD dependent epimerase/dehydratase family HCN55_RS16560 PF00534 Glycosyl transferases group 1 HCN55_RS16560 PF13439 Glycosyltransferase Family 4 HCN55_RS16575 PF00534 Glycosyl transferases group 1 HCN55_RS16575 PF13439 Glycosyltransferase Family 4 HCN55_RS16580 PF01636 Phosphotransferase enzyme family HCN55_RS16585 PF03073 TspO/MBR family HCN55_RS16590 PF00343 Carbohydrate phosphorylase HCN55_RS16595 PF08323 Starch synthase catalytic domain HCN55_RS16595 PF00534 Glycosyl transferases group 1 HCN55_RS16600 PF00483 Nucleotidyl transferase HCN55_RS16605 PF00483 Nucleotidyl transferase HCN55_RS16610 PF02806 Alpha amylase, C-terminal all-beta domain HCN55_RS16610 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HCN55_RS16610 PF00128 Alpha amylase, catalytic domain HCN55_RS16735 PF09515 Thiamine transporter protein (Thia_YuaJ) HCN55_RS16740 PF00583 Acetyltransferase (GNAT) family HCN55_RS16745 PF01145 SPFH domain / Band 7 family HCN55_RS16745 PF15975 Flotillin HCN55_RS16755 PF12867 DinB superfamily HCN55_RS16765 PF00465 Iron-containing alcohol dehydrogenase HCN55_RS16770 PF00171 Aldehyde dehydrogenase family HCN55_RS16780 PF17735 Biofilm surface layer A HCN55_RS16785 PF02080 TrkA-C domain HCN55_RS16785 PF02254 TrkA-N domain HCN55_RS16790 PF02386 Cation transport protein HCN55_RS16795 PF05360 yiaA/B two helix domain HCN55_RS16800 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HCN55_RS16800 PF13457 GW (Gly-Tryp) dipeptide domain HCN55_RS16805 PF07690 Major Facilitator Superfamily HCN55_RS16810 PF05995 Cysteine dioxygenase type I HCN55_RS16820 PF02673 Bacitracin resistance protein BacA HCN55_RS16825 PF01594 AI-2E family transporter HCN55_RS16830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCN55_RS16830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCN55_RS16835 PF06134 L-rhamnose isomerase (RhaA) HCN55_RS16840 PF05336 L-rhamnose mutarotase HCN55_RS16845 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCN55_RS16845 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCN55_RS16850 PF00455 DeoR C terminal sensor domain HCN55_RS16850 PF08220 DeoR-like helix-turn-helix domain HCN55_RS16855 PF00596 Class II Aldolase and Adducin N-terminal domain HCN55_RS16860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_RS16860 PF00672 HAMP domain HCN55_RS16860 PF02743 Cache domain HCN55_RS16865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_RS16865 PF00672 HAMP domain HCN55_RS16865 PF02743 Cache domain HCN55_RS16870 PF00672 HAMP domain HCN55_RS16870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_RS16870 PF02743 Cache domain HCN55_RS16875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_RS16875 PF00672 HAMP domain HCN55_RS16875 PF02743 Cache domain HCN55_RS16890 PF01894 Uncharacterised protein family UPF0047 HCN55_RS16900 PF00128 Alpha amylase, catalytic domain HCN55_RS16900 PF16657 Maltogenic Amylase, C-terminal domain HCN55_RS16905 PF01595 Cyclin M transmembrane N-terminal domain HCN55_RS16905 PF00571 CBS domain HCN55_RS16905 PF03471 Transporter associated domain HCN55_RS16910 PF04298 Putative neutral zinc metallopeptidase HCN55_RS16920 PF11458 Membrane-integrating protein Mistic HCN55_RS16925 PF07885 Ion channel HCN55_RS16925 PF02254 TrkA-N domain HCN55_RS16930 PF08868 YugN-like family HCN55_RS16940 PF00342 Phosphoglucose isomerase HCN55_RS16945 PF00465 Iron-containing alcohol dehydrogenase HCN55_RS16950 PF00465 Iron-containing alcohol dehydrogenase HCN55_RS16955 PF04070 Domain of unknown function (DUF378) HCN55_RS16960 PF00575 S1 RNA binding domain HCN55_RS16965 PF00155 Aminotransferase class I and II HCN55_RS16970 PF01037 Lrp/AsnC ligand binding domain HCN55_RS16975 PF08386 TAP-like protein HCN55_RS16975 PF00561 alpha/beta hydrolase fold HCN55_RS16980 PF08958 Domain of unknown function (DUF1871) HCN55_RS16985 PF00155 Aminotransferase class I and II HCN55_RS16990 PF00512 His Kinase A (phospho-acceptor) domain HCN55_RS16990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS16995 PF08810 Kinase associated protein B HCN55_RS17000 PF00929 Exonuclease HCN55_RS17010 PF07690 Major Facilitator Superfamily HCN55_RS17015 PF00912 Transglycosylase HCN55_RS17015 PF00905 Penicillin binding protein transpeptidase domain HCN55_RS17020 PF04134 Protein of unknown function, DUF393 HCN55_RS17025 PF17328 Family of unknown function (DUF5366) HCN55_RS17030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS17030 PF00989 PAS fold HCN55_RS17030 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HCN55_RS17030 PF17203 Single cache domain 3 HCN55_RS17035 PF00072 Response regulator receiver domain HCN55_RS17060 PF03390 2-hydroxycarboxylate transporter family HCN55_RS17070 PF13244 Domain of unknown function (DUF4040) HCN55_RS17070 PF00361 Proton-conducting membrane transporter HCN55_RS17070 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HCN55_RS17075 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HCN55_RS17080 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HCN55_RS17085 PF00361 Proton-conducting membrane transporter HCN55_RS17090 PF01899 Na+/H+ ion antiporter subunit HCN55_RS17095 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HCN55_RS17100 PF03334 Na+/H+ antiporter subunit HCN55_RS17105 PF03061 Thioesterase superfamily HCN55_RS17110 PF00196 Bacterial regulatory proteins, luxR family HCN55_RS17110 PF00072 Response regulator receiver domain HCN55_RS17115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS17115 PF07730 Histidine kinase HCN55_RS17125 PF00348 Polyprenyl synthetase HCN55_RS17130 PF08181 DegQ (SacQ) family HCN55_RS17145 PF00563 EAL domain HCN55_RS17145 PF08668 HDOD domain HCN55_RS17150 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HCN55_RS17150 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HCN55_RS17150 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain HCN55_RS17155 PF00857 Isochorismatase family HCN55_RS17160 PF07997 Protein of unknown function (DUF1694) HCN55_RS17165 PF14166 YueH-like protein HCN55_RS17170 PF10676 Spore germination protein gerPA/gerPF HCN55_RS17175 PF01594 AI-2E family transporter HCN55_RS17180 PF10049 Protein of unknown function (DUF2283) HCN55_RS17185 PF10842 Protein of unknown function (DUF2642) HCN55_RS17190 PF01966 HD domain HCN55_RS17195 PF00106 short chain dehydrogenase HCN55_RS17200 PF17355 Family of unknown function (DUF5383) HCN55_RS17210 PF01580 FtsK/SpoIIIE family HCN55_RS17210 PF12538 DNA transporter HCN55_RS17215 PF10140 WXG100 protein secretion system (Wss), protein YukC HCN55_RS17220 PF08817 WXG100 protein secretion system (Wss), protein YukD HCN55_RS17225 PF06013 Proteins of 100 residues with WXG HCN55_RS17230 PF06018 CodY GAF-like domain HCN55_RS17230 PF13556 PucR C-terminal helix-turn-helix domain HCN55_RS17230 PF17853 GGDEF-like domain HCN55_RS17235 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HCN55_RS17235 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HCN55_RS17240 PF10042 Uncharacterized conserved protein (DUF2278) HCN55_RS17245 PF03621 MbtH-like protein HCN55_RS17250 PF00550 Phosphopantetheine attachment site HCN55_RS17250 PF00975 Thioesterase domain HCN55_RS17250 PF00668 Condensation domain HCN55_RS17250 PF00501 AMP-binding enzyme HCN55_RS17250 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS17255 PF00550 Phosphopantetheine attachment site HCN55_RS17255 PF00857 Isochorismatase family HCN55_RS17260 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS17260 PF00501 AMP-binding enzyme HCN55_RS17265 PF00425 chorismate binding enzyme HCN55_RS17270 PF00106 short chain dehydrogenase HCN55_RS17275 PF00756 Putative esterase HCN55_RS17280 PF00174 Oxidoreductase molybdopterin binding domain HCN55_RS17285 PF02632 BioY family HCN55_RS17290 PF03553 Na+/H+ antiporter family HCN55_RS17290 PF13726 Na+-H+ antiporter family HCN55_RS17295 PF00883 Cytosol aminopeptidase family, catalytic domain HCN55_RS17295 PF02789 Cytosol aminopeptidase family, N-terminal domain HCN55_RS17300 PF02681 Divergent PAP2 family HCN55_RS17305 PF06725 3D domain HCN55_RS17310 PF14068 Putative membrane protein HCN55_RS17315 PF17302 Family of unknown function (DUF5351) HCN55_RS17320 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_RS17325 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_RS17335 PF00478 IMP dehydrogenase / GMP reductase domain HCN55_RS17340 PF04299 Putative FMN-binding domain HCN55_RS17345 PF00583 Acetyltransferase (GNAT) family HCN55_RS17350 PF01521 Iron-sulphur cluster biosynthesis HCN55_RS17355 PF01678 Diaminopimelate epimerase HCN55_RS17360 PF07662 Na+ dependent nucleoside transporter C-terminus HCN55_RS17360 PF01773 Na+ dependent nucleoside transporter N-terminus HCN55_RS17365 PF07293 Protein of unknown function (DUF1450) HCN55_RS17370 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_RS17375 PF07315 Protein of unknown function (DUF1462) HCN55_RS17380 PF01106 NifU-like domain HCN55_RS17385 PF00326 Prolyl oligopeptidase family HCN55_RS17385 PF07676 WD40-like Beta Propeller Repeat HCN55_RS17390 PF00288 GHMP kinases N terminal domain HCN55_RS17390 PF08544 GHMP kinases C terminal HCN55_RS17395 PF00291 Pyridoxal-phosphate dependent enzyme HCN55_RS17400 PF03447 Homoserine dehydrogenase, NAD binding domain HCN55_RS17400 PF00742 Homoserine dehydrogenase HCN55_RS17400 PF01842 ACT domain HCN55_RS17410 PF04608 Phosphatidylglycerophosphatase A HCN55_RS17415 PF13344 Haloacid dehalogenase-like hydrolase HCN55_RS17420 PF01934 Protein of unknown function DUF86 HCN55_RS17425 PF06265 Protein of unknown function (DUF1027) HCN55_RS17430 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) HCN55_RS17435 PF04055 Radical SAM superfamily HCN55_RS17435 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HCN55_RS17440 PF01551 Peptidase family M23 HCN55_RS17445 PF09560 Sporulation protein YunB (Spo_YunB) HCN55_RS17450 PF08827 Domain of unknown function (DUF1805) HCN55_RS17455 PF02872 5'-nucleotidase, C-terminal domain HCN55_RS17460 PF01925 Sulfite exporter TauE/SafE HCN55_RS17465 PF01904 Protein of unknown function DUF72 HCN55_RS17480 PF07905 Purine catabolism regulatory protein-like family HCN55_RS17480 PF17853 GGDEF-like domain HCN55_RS17480 PF13556 PucR C-terminal helix-turn-helix domain HCN55_RS17485 PF00860 Permease family HCN55_RS17490 PF00860 Permease family HCN55_RS17495 PF01014 Uricase HCN55_RS17495 PF09349 OHCU decarboxylase HCN55_RS17500 PF00576 HIUase/Transthyretin family HCN55_RS17505 PF09680 Family of unknown function HCN55_RS17510 PF01799 [2Fe-2S] binding domain HCN55_RS17510 PF00111 2Fe-2S iron-sulfur cluster binding domain HCN55_RS17515 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HCN55_RS17515 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HCN55_RS17520 PF00941 FAD binding domain in molybdopterin dehydrogenase HCN55_RS17525 PF12804 MobA-like NTP transferase domain HCN55_RS17530 PF13478 XdhC Rossmann domain HCN55_RS17530 PF02625 XdhC and CoxI family HCN55_RS17535 PF00266 Aminotransferase class-V HCN55_RS17540 PF01546 Peptidase family M20/M25/M40 HCN55_RS17550 PF04231 Endonuclease I HCN55_RS17555 PF17912 MalK OB fold domain HCN55_RS17555 PF00005 ABC transporter HCN55_RS17555 PF03459 TOBE domain HCN55_RS17565 PF00294 pfkB family carbohydrate kinase HCN55_RS17570 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS17575 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS17580 PF01547 Bacterial extracellular solute-binding protein HCN55_RS17585 PF01380 SIS domain HCN55_RS17590 PF01541 GIY-YIG catalytic domain HCN55_RS17595 PF01266 FAD dependent oxidoreductase HCN55_RS17610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_RS17620 PF01458 Uncharacterized protein family (UPF0051) HCN55_RS17625 PF01592 NifU-like N terminal domain HCN55_RS17630 PF00266 Aminotransferase class-V HCN55_RS17635 PF01458 Uncharacterized protein family (UPF0051) HCN55_RS17640 PF00005 ABC transporter HCN55_RS17650 PF02627 Carboxymuconolactone decarboxylase family HCN55_RS17655 PF03180 NLPA lipoprotein HCN55_RS17660 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS17665 PF00005 ABC transporter HCN55_RS17665 PF09383 NIL domain HCN55_RS17670 PF02036 SCP-2 sterol transfer family HCN55_RS17675 PF00085 Thioredoxin HCN55_RS17680 PF01751 Toprim domain HCN55_RS17685 PF10830 Protein of unknown function (DUF2553) HCN55_RS17690 PF01597 Glycine cleavage H-protein HCN55_RS17695 PF03960 ArsC family HCN55_RS17700 PF02770 Acyl-CoA dehydrogenase, middle domain HCN55_RS17700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HCN55_RS17700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HCN55_RS17705 PF00108 Thiolase, N-terminal domain HCN55_RS17705 PF02803 Thiolase, C-terminal domain HCN55_RS17710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HCN55_RS17710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HCN55_RS17710 PF00378 Enoyl-CoA hydratase/isomerase HCN55_RS17715 PF14115 YuzL-like protein HCN55_RS17720 PF01619 Proline dehydrogenase HCN55_RS17730 PF07875 Coat F domain HCN55_RS17735 PF01047 MarR family HCN55_RS17740 PF07690 Major Facilitator Superfamily HCN55_RS17745 PF14552 Tautomerase enzyme HCN55_RS17755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS17755 PF03466 LysR substrate binding domain HCN55_RS17760 PF10835 Protein of unknown function (DUF2573) HCN55_RS17765 PF00005 ABC transporter HCN55_RS17770 PF14039 YusW-like protein HCN55_RS17780 PF00106 short chain dehydrogenase HCN55_RS17785 PF00210 Ferritin-like domain HCN55_RS17790 PF13180 PDZ domain HCN55_RS17795 PF00072 Response regulator receiver domain HCN55_RS17795 PF00486 Transcriptional regulatory protein, C terminal HCN55_RS17800 PF00512 His Kinase A (phospho-acceptor) domain HCN55_RS17800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS17800 PF00672 HAMP domain HCN55_RS17810 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS17815 PF00206 Lyase HCN55_RS17815 PF10415 Fumarase C C-terminus HCN55_RS17820 PF13113 Protein of unknown function (DUF3970) HCN55_RS17825 PF03323 Bacillus/Clostridium GerA spore germination protein HCN55_RS17830 PF03845 Spore germination protein HCN55_RS17835 PF05504 Spore germination B3/ GerAC like, C-terminal HCN55_RS17840 PF00196 Bacterial regulatory proteins, luxR family HCN55_RS17840 PF00072 Response regulator receiver domain HCN55_RS17845 PF07730 Histidine kinase HCN55_RS17845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS17845 PF00672 HAMP domain HCN55_RS17850 PF09922 Cell wall-active antibiotics response 4TMS YvqF HCN55_RS17855 PF13349 Putative adhesin HCN55_RS17860 PF04012 PspA/IM30 family HCN55_RS17870 PF07690 Major Facilitator Superfamily HCN55_RS17875 PF01923 Cobalamin adenosyltransferase HCN55_RS17880 PF00005 ABC transporter HCN55_RS17885 PF01032 FecCD transport family HCN55_RS17890 PF01497 Periplasmic binding protein HCN55_RS17895 PF00106 short chain dehydrogenase HCN55_RS17900 PF08450 SMP-30/Gluconolactonase/LRE-like region HCN55_RS17905 PF00512 His Kinase A (phospho-acceptor) domain HCN55_RS17905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS17910 PF00486 Transcriptional regulatory protein, C terminal HCN55_RS17910 PF00072 Response regulator receiver domain HCN55_RS17920 PF04545 Sigma-70, region 4 HCN55_RS17925 PF12841 YvrJ protein family HCN55_RS17930 PF00190 Cupin HCN55_RS17935 PF14184 Regulatory protein YrvL HCN55_RS17940 PF02687 FtsX-like permease family HCN55_RS17940 PF12704 MacB-like periplasmic core domain HCN55_RS17945 PF00005 ABC transporter HCN55_RS17950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HCN55_RS17955 PF00005 ABC transporter HCN55_RS17960 PF01032 FecCD transport family HCN55_RS17965 PF01032 FecCD transport family HCN55_RS17970 PF01497 Periplasmic binding protein HCN55_RS17975 PF13520 Amino acid permease HCN55_RS17980 PF09575 Small spore protein J (Spore_SspJ) HCN55_RS17985 PF04307 LexA-binding, inner membrane-associated putative hydrolase HCN55_RS17990 PF00884 Sulfatase HCN55_RS17995 PF12727 PBP superfamily domain HCN55_RS17995 PF12728 Helix-turn-helix domain HCN55_RS18005 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS18010 PF00248 Aldo/keto reductase family HCN55_RS18020 PF00999 Sodium/hydrogen exchanger family HCN55_RS18025 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HCN55_RS18025 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HCN55_RS18030 PF00175 Oxidoreductase NAD-binding domain HCN55_RS18030 PF00667 FAD binding domain HCN55_RS18030 PF00258 Flavodoxin HCN55_RS18035 PF13538 UvrD-like helicase C-terminal domain HCN55_RS18040 PF03458 UPF0126 domain HCN55_RS18045 PF02600 Disulfide bond formation protein DsbB HCN55_RS18050 PF13462 Thioredoxin HCN55_RS18055 PF00403 Heavy-metal-associated domain HCN55_RS18060 PF00403 Heavy-metal-associated domain HCN55_RS18065 PF00403 Heavy-metal-associated domain HCN55_RS18070 PF02583 Metal-sensitive transcriptional repressor HCN55_RS18075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCN55_RS18075 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCN55_RS18080 PF02525 Flavodoxin-like fold HCN55_RS18090 PF17314 Family of unknown function (DUF5360) HCN55_RS18095 PF00893 Small Multidrug Resistance protein HCN55_RS18100 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS18105 PF00106 short chain dehydrogenase HCN55_RS18115 PF01668 SmpB protein HCN55_RS18120 PF08206 Ribonuclease B OB domain HCN55_RS18120 PF17876 Cold shock domain HCN55_RS18120 PF00773 RNB domain HCN55_RS18120 PF00575 S1 RNA binding domain HCN55_RS18125 PF12146 Serine aminopeptidase, S33 HCN55_RS18130 PF03840 Preprotein translocase SecG subunit HCN55_RS18135 PF00561 alpha/beta hydrolase fold HCN55_RS18140 PF01381 Helix-turn-helix HCN55_RS18155 PF01638 HxlR-like helix-turn-helix HCN55_RS18160 PF00672 HAMP domain HCN55_RS18160 PF12729 Four helix bundle sensory module for signal transduction HCN55_RS18160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HCN55_RS18165 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS18170 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HCN55_RS18175 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS18180 PF00571 CBS domain HCN55_RS18180 PF00005 ABC transporter HCN55_RS18185 PF12802 MarR family HCN55_RS18190 PF17418 Sporulation delaying protein SdpA HCN55_RS18195 PF05090 Vitamin K-dependent gamma-carboxylase HCN55_RS18205 PF07853 Protein of unknown function (DUF1648) HCN55_RS18205 PF13630 SdpI/YhfL protein family HCN55_RS18210 PF01022 Bacterial regulatory protein, arsR family HCN55_RS18215 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS18220 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HCN55_RS18225 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS18230 PF00571 CBS domain HCN55_RS18230 PF00005 ABC transporter HCN55_RS18235 PF12802 MarR family HCN55_RS18240 PF01914 MarC family integral membrane protein HCN55_RS18245 PF08000 Bacterial PH domain HCN55_RS18245 PF11724 YvbH-like oligomerisation region HCN55_RS18255 PF13240 zinc-ribbon domain HCN55_RS18260 PF00583 Acetyltransferase (GNAT) family HCN55_RS18265 PF03952 Enolase, N-terminal domain HCN55_RS18265 PF00113 Enolase, C-terminal TIM barrel domain HCN55_RS18270 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HCN55_RS18270 PF01676 Metalloenzyme superfamily HCN55_RS18275 PF00121 Triosephosphate isomerase HCN55_RS18280 PF00162 Phosphoglycerate kinase HCN55_RS18285 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HCN55_RS18285 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HCN55_RS18290 PF04198 Putative sugar-binding domain HCN55_RS18295 PF00083 Sugar (and other) transporter HCN55_RS18300 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS18305 PF00296 Luciferase-like monooxygenase HCN55_RS18310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS18310 PF03466 LysR substrate binding domain HCN55_RS18315 PF00892 EamA-like transporter family HCN55_RS18320 PF00324 Amino acid permease HCN55_RS18325 PF00704 Glycosyl hydrolases family 18 HCN55_RS18330 PF02589 LUD domain HCN55_RS18335 PF11870 Domain of unknown function (DUF3390) HCN55_RS18335 PF02589 LUD domain HCN55_RS18335 PF13183 4Fe-4S dicluster domain HCN55_RS18340 PF02754 Cysteine-rich domain HCN55_RS18345 PF00196 Bacterial regulatory proteins, luxR family HCN55_RS18345 PF00072 Response regulator receiver domain HCN55_RS18350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS18350 PF07730 Histidine kinase HCN55_RS18360 PF00005 ABC transporter HCN55_RS18365 PF12697 Alpha/beta hydrolase family HCN55_RS18370 PF07228 Stage II sporulation protein E (SpoIIE) HCN55_RS18370 PF13426 PAS domain HCN55_RS18375 PF07745 Glycosyl hydrolase family 53 HCN55_RS18380 PF08532 Beta-galactosidase trimerisation domain HCN55_RS18380 PF08533 Beta-galactosidase C-terminal domain HCN55_RS18380 PF02449 Beta-galactosidase HCN55_RS18385 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS18390 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS18395 PF13416 Bacterial extracellular solute-binding protein HCN55_RS18400 PF00356 Bacterial regulatory proteins, lacI family HCN55_RS18405 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS18405 PF07729 FCD domain HCN55_RS18410 PF02652 L-lactate permease HCN55_RS18415 PF00309 Sigma-54 factor, Activator interacting domain (AID) HCN55_RS18415 PF04963 Sigma-54 factor, core binding domain HCN55_RS18415 PF04552 Sigma-54, DNA binding domain HCN55_RS18420 PF09628 YvfG protein HCN55_RS18425 PF04230 Polysaccharide pyruvyl transferase HCN55_RS18430 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HCN55_RS18435 PF17836 PglD N-terminal domain HCN55_RS18435 PF00132 Bacterial transferase hexapeptide (six repeats) HCN55_RS18440 PF02397 Bacterial sugar transferase HCN55_RS18445 PF01943 Polysaccharide biosynthesis protein HCN55_RS18445 PF14667 Polysaccharide biosynthesis C-terminal domain HCN55_RS18450 PF00535 Glycosyl transferase family 2 HCN55_RS18455 PF04230 Polysaccharide pyruvyl transferase HCN55_RS18460 PF00535 Glycosyl transferase family 2 HCN55_RS18470 PF00534 Glycosyl transferases group 1 HCN55_RS18470 PF13439 Glycosyltransferase Family 4 HCN55_RS18475 PF00535 Glycosyl transferase family 2 HCN55_RS18480 PF00534 Glycosyl transferases group 1 HCN55_RS18480 PF13439 Glycosyltransferase Family 4 HCN55_RS18485 PF02719 Polysaccharide biosynthesis protein HCN55_RS18490 PF13614 AAA domain HCN55_RS18495 PF02706 Chain length determinant protein HCN55_RS18500 PF08671 Anti-repressor SinI HCN55_RS18500 PF01381 Helix-turn-helix HCN55_RS18505 PF00135 Carboxylesterase family HCN55_RS18515 PF05870 Phenolic acid decarboxylase (PAD) HCN55_RS18525 PF01177 Asp/Glu/Hydantoin racemase HCN55_RS18530 PF00144 Beta-lactamase HCN55_RS18530 PF11954 Domain of unknown function (DUF3471) HCN55_RS18535 PF02435 Levansucrase/Invertase HCN55_RS18540 PF08244 Glycosyl hydrolases family 32 C terminal HCN55_RS18540 PF00251 Glycosyl hydrolases family 32 N-terminal domain HCN55_RS18545 PF13520 Amino acid permease HCN55_RS18550 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS18550 PF17934 Tetracyclin repressor-like, C-terminal domain HCN55_RS18555 PF00893 Small Multidrug Resistance protein HCN55_RS18560 PF00893 Small Multidrug Resistance protein HCN55_RS18565 PF11553 Protein of unknown function (DUF3231) HCN55_RS18570 PF01565 FAD binding domain HCN55_RS18570 PF08031 Berberine and berberine like HCN55_RS18575 PF01734 Patatin-like phospholipase HCN55_RS18585 PF00574 Clp protease HCN55_RS18590 PF13419 Haloacid dehalogenase-like hydrolase HCN55_RS18595 PF00128 Alpha amylase, catalytic domain HCN55_RS18595 PF16657 Maltogenic Amylase, C-terminal domain HCN55_RS18600 PF03636 Glycosyl hydrolase family 65, N-terminal domain HCN55_RS18600 PF03633 Glycosyl hydrolase family 65, C-terminal domain HCN55_RS18600 PF03632 Glycosyl hydrolase family 65 central catalytic domain HCN55_RS18605 PF06691 Protein of unknown function (DUF1189) HCN55_RS18610 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS18615 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS18620 PF13416 Bacterial extracellular solute-binding protein HCN55_RS18625 PF00128 Alpha amylase, catalytic domain HCN55_RS18625 PF02903 Alpha amylase, N-terminal ig-like domain HCN55_RS18630 PF00356 Bacterial regulatory proteins, lacI family HCN55_RS18635 PF03641 Possible lysine decarboxylase HCN55_RS18640 PF03819 MazG nucleotide pyrophosphohydrolase domain HCN55_RS18645 PF00916 Sulfate permease family HCN55_RS18645 PF01740 STAS domain HCN55_RS18650 PF00484 Carbonic anhydrase HCN55_RS18655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HCN55_RS18655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HCN55_RS18660 PF02687 FtsX-like permease family HCN55_RS18665 PF00005 ABC transporter HCN55_RS18670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS18675 PF00486 Transcriptional regulatory protein, C terminal HCN55_RS18675 PF00072 Response regulator receiver domain HCN55_RS18685 PF00797 N-acetyltransferase HCN55_RS18690 PF00381 PTS HPr component phosphorylation site HCN55_RS18695 PF02650 WhiA C-terminal HTH domain HCN55_RS18695 PF14527 WhiA LAGLIDADG-like domain HCN55_RS18695 PF10298 WhiA N-terminal LAGLIDADG-like domain HCN55_RS18700 PF01933 Uncharacterised protein family UPF0052 HCN55_RS18705 PF03668 P-loop ATPase protein family HCN55_RS18710 PF00293 NUDIX domain HCN55_RS18715 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_RS18720 PF00877 NlpC/P60 family HCN55_RS18730 PF00664 ABC transporter transmembrane region HCN55_RS18730 PF00005 ABC transporter HCN55_RS18750 PF01502 Phosphoribosyl-AMP cyclohydrolase HCN55_RS18750 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HCN55_RS18755 PF00977 Histidine biosynthesis protein HCN55_RS18760 PF00977 Histidine biosynthesis protein HCN55_RS18765 PF00117 Glutamine amidotransferase class-I HCN55_RS18770 PF00475 Imidazoleglycerol-phosphate dehydratase HCN55_RS18775 PF00815 Histidinol dehydrogenase HCN55_RS18780 PF01634 ATP phosphoribosyltransferase HCN55_RS18785 PF13393 Histidyl-tRNA synthetase HCN55_RS18790 PF13529 Peptidase_C39 like family HCN55_RS18795 PF03211 Pectate lyase HCN55_RS18800 PF14602 Hexapeptide repeat of succinyl-transferase HCN55_RS18805 PF13419 Haloacid dehalogenase-like hydrolase HCN55_RS18810 PF07670 Nucleoside recognition HCN55_RS18815 PF01790 Prolipoprotein diacylglyceryl transferase HCN55_RS18820 PF07475 HPr Serine kinase C-terminal domain HCN55_RS18820 PF02603 HPr Serine kinase N terminus HCN55_RS18825 PF01979 Amidohydrolase family HCN55_RS18830 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HCN55_RS18835 PF07702 UTRA domain HCN55_RS18835 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS18840 PF00149 Calcineurin-like phosphoesterase HCN55_RS18845 PF01047 MarR family HCN55_RS18850 PF00067 Cytochrome P450 HCN55_RS18855 PF16715 Cyclodipeptide synthase HCN55_RS18860 PF01047 MarR family HCN55_RS18865 PF07690 Major Facilitator Superfamily HCN55_RS18870 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV HCN55_RS18875 PF04024 PspC domain HCN55_RS18880 PF13349 Putative adhesin HCN55_RS18900 PF00005 ABC transporter HCN55_RS18900 PF17755 UvrA DNA-binding domain HCN55_RS18900 PF17760 UvrA interaction domain HCN55_RS18905 PF04851 Type III restriction enzyme, res subunit HCN55_RS18905 PF02151 UvrB/uvrC motif HCN55_RS18905 PF17757 UvrB interaction domain HCN55_RS18905 PF12344 Ultra-violet resistance protein B HCN55_RS18905 PF00271 Helicase conserved C-terminal domain HCN55_RS18910 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) HCN55_RS18915 PF00391 PEP-utilising enzyme, mobile domain HCN55_RS18915 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HCN55_RS18920 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS18925 PF07690 Major Facilitator Superfamily HCN55_RS18930 PF17820 PDZ domain HCN55_RS18940 PF17820 PDZ domain HCN55_RS18940 PF03572 Peptidase family S41 HCN55_RS18940 PF01471 Putative peptidoglycan binding domain HCN55_RS18945 PF02687 FtsX-like permease family HCN55_RS18945 PF18075 FtsX extracellular domain HCN55_RS18950 PF00005 ABC transporter HCN55_RS18955 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HCN55_RS18960 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HCN55_RS18960 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HCN55_RS18970 PF01043 SecA preprotein cross-linking domain HCN55_RS18970 PF02810 SEC-C motif HCN55_RS18970 PF07517 SecA DEAD-like domain HCN55_RS18970 PF07516 SecA Wing and Scaffold domain HCN55_RS18975 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus HCN55_RS18975 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HCN55_RS18990 PF02561 Flagellar protein FliS HCN55_RS18995 PF02465 Flagellar hook-associated protein 2 N-terminus HCN55_RS18995 PF07195 Flagellar hook-associated protein 2 C-terminus HCN55_RS18995 PF07196 Flagellin hook IN motif HCN55_RS19000 PF03646 FlaG protein HCN55_RS19005 PF00700 Bacterial flagellin C-terminal helical region HCN55_RS19005 PF00669 Bacterial flagellin N-terminal helical region HCN55_RS19010 PF02599 Global regulator protein family HCN55_RS19015 PF02623 FliW protein HCN55_RS19030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HCN55_RS19030 PF00460 Flagella basal body rod protein HCN55_RS19035 PF05130 FlgN protein HCN55_RS19040 PF04316 Anti-sigma-28 factor, FlgM HCN55_RS19055 PF10719 Late competence development protein ComFB HCN55_RS19060 PF04851 Type III restriction enzyme, res subunit HCN55_RS19060 PF00271 Helicase conserved C-terminal domain HCN55_RS19065 PF02645 Uncharacterised protein, DegV family COG1307 HCN55_RS19070 PF00196 Bacterial regulatory proteins, luxR family HCN55_RS19070 PF00072 Response regulator receiver domain HCN55_RS19075 PF07730 Histidine kinase HCN55_RS19075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS19075 PF05384 Sensor protein DegS HCN55_RS19080 PF09186 Domain of unknown function (DUF1949) HCN55_RS19080 PF01205 Uncharacterized protein family UPF0029 HCN55_RS19085 PF03816 Cell envelope-related transcriptional attenuator domain HCN55_RS19090 PF00953 Glycosyl transferase family 4 HCN55_RS19100 PF00535 Glycosyl transferase family 2 HCN55_RS19105 PF02706 Chain length determinant protein HCN55_RS19110 PF04932 O-Antigen ligase HCN55_RS19115 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HCN55_RS19115 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HCN55_RS19115 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HCN55_RS19120 PF13439 Glycosyltransferase Family 4 HCN55_RS19120 PF00534 Glycosyl transferases group 1 HCN55_RS19125 PF01943 Polysaccharide biosynthesis protein HCN55_RS19125 PF14667 Polysaccharide biosynthesis C-terminal domain HCN55_RS19135 PF04122 Putative cell wall binding repeat 2 HCN55_RS19135 PF01520 N-acetylmuramoyl-L-alanine amidase HCN55_RS19140 PF04122 Putative cell wall binding repeat 2 HCN55_RS19140 PF08486 Stage II sporulation protein HCN55_RS19150 PF03816 Cell envelope-related transcriptional attenuator domain HCN55_RS19155 PF02350 UDP-N-acetylglucosamine 2-epimerase HCN55_RS19160 PF00483 Nucleotidyl transferase HCN55_RS19175 PF00535 Glycosyl transferase family 2 HCN55_RS19185 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HCN55_RS19195 PF00483 Nucleotidyl transferase HCN55_RS19200 PF00005 ABC transporter HCN55_RS19205 PF01061 ABC-2 type transporter HCN55_RS19210 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HCN55_RS19215 PF00534 Glycosyl transferases group 1 HCN55_RS19215 PF09318 Glycosyl transferase 1 domain A HCN55_RS19220 PF01467 Cytidylyltransferase-like HCN55_RS19225 PF03808 Glycosyl transferase WecB/TagA/CpsF family HCN55_RS19230 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HCN55_RS19240 PF08239 Bacterial SH3 domain HCN55_RS19240 PF05036 Sporulation related domain HCN55_RS19240 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HCN55_RS19245 PF01238 Phosphomannose isomerase type I HCN55_RS19250 PF03323 Bacillus/Clostridium GerA spore germination protein HCN55_RS19255 PF03845 Spore germination protein HCN55_RS19260 PF05504 Spore germination B3/ GerAC like, C-terminal HCN55_RS19265 PF00083 Sugar (and other) transporter HCN55_RS19270 PF03816 Cell envelope-related transcriptional attenuator domain HCN55_RS19280 PF00877 NlpC/P60 family HCN55_RS19290 PF09587 Bacterial capsule synthesis protein PGA_cap HCN55_RS19295 PF14102 Capsule biosynthesis CapC HCN55_RS19300 PF08245 Mur ligase middle domain HCN55_RS19305 PF00356 Bacterial regulatory proteins, lacI family HCN55_RS19310 PF00294 pfkB family carbohydrate kinase HCN55_RS19315 PF05025 RbsD / FucU transport protein family HCN55_RS19320 PF00005 ABC transporter HCN55_RS19325 PF02653 Branched-chain amino acid transport system / permease component HCN55_RS19330 PF13407 Periplasmic binding protein domain HCN55_RS19335 PF08239 Bacterial SH3 domain HCN55_RS19340 PF13031 Protein of unknown function (DUF3892) HCN55_RS19345 PF02525 Flavodoxin-like fold HCN55_RS19350 PF03306 Alpha-acetolactate decarboxylase HCN55_RS19355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCN55_RS19355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCN55_RS19355 PF00205 Thiamine pyrophosphate enzyme, central domain HCN55_RS19360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS19360 PF03466 LysR substrate binding domain HCN55_RS19365 PF02040 Arsenical pump membrane protein HCN55_RS19380 PF08757 CotH kinase protein HCN55_RS19390 PF01613 Flavin reductase like domain HCN55_RS19395 PF13789 Domain of unknown function (DUF4181) HCN55_RS19405 PF13404 AsnC-type helix-turn-helix domain HCN55_RS19405 PF01037 Lrp/AsnC ligand binding domain HCN55_RS19410 PF02417 Chromate transporter HCN55_RS19415 PF02417 Chromate transporter HCN55_RS19425 PF03358 NADPH-dependent FMN reductase HCN55_RS19430 PF03466 LysR substrate binding domain HCN55_RS19430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS19435 PF04493 Endonuclease V HCN55_RS19440 PF07661 MORN repeat variant HCN55_RS19445 PF14449 Pre-toxin TG HCN55_RS19445 PF04740 LXG domain of WXG superfamily HCN55_RS19445 PF14431 YwqJ-like deaminase HCN55_RS19455 PF16888 Domain of unknown function (DUF5082) HCN55_RS19465 PF09234 Domain of unknown function (DUF1963) HCN55_RS19470 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HCN55_RS19470 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HCN55_RS19470 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HCN55_RS19480 PF13614 AAA domain HCN55_RS19485 PF02706 Chain length determinant protein HCN55_RS19485 PF13807 G-rich domain on putative tyrosine kinase HCN55_RS19495 PF04434 SWIM zinc finger HCN55_RS19500 PF00176 SNF2 family N-terminal domain HCN55_RS19500 PF00271 Helicase conserved C-terminal domain HCN55_RS19500 PF12419 SNF2 Helicase protein HCN55_RS19510 PF00455 DeoR C terminal sensor domain HCN55_RS19510 PF08220 DeoR-like helix-turn-helix domain HCN55_RS19515 PF00436 Single-strand binding protein family HCN55_RS19525 PF14183 YwpF-like protein HCN55_RS19540 PF06580 Histidine kinase HCN55_RS19540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS19545 PF01741 Large-conductance mechanosensitive channel, MscL HCN55_RS19550 PF07977 FabA-like domain HCN55_RS19555 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_RS19560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HCN55_RS19560 PF00460 Flagella basal body rod protein HCN55_RS19565 PF00460 Flagella basal body rod protein HCN55_RS19565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HCN55_RS19575 PF12116 Stage III sporulation protein D HCN55_RS19585 PF01047 MarR family HCN55_RS19590 PF07690 Major Facilitator Superfamily HCN55_RS19595 PF13229 Right handed beta helix region HCN55_RS19600 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HCN55_RS19605 PF07690 Major Facilitator Superfamily HCN55_RS19610 PF00857 Isochorismatase family HCN55_RS19620 PF00909 Ammonium Transporter Family HCN55_RS19625 PF00543 Nitrogen regulatory protein P-II HCN55_RS19630 PF01569 PAP2 superfamily HCN55_RS19635 PF04892 VanZ like family HCN55_RS19640 PF01551 Peptidase family M23 HCN55_RS19645 PF00583 Acetyltransferase (GNAT) family HCN55_RS19650 PF17319 Family of unknown function (DUF5362) HCN55_RS19660 PF17370 Family of unknown function (DUF5392) HCN55_RS19665 PF13396 Phospholipase_D-nuclease N-terminal HCN55_RS19665 PF13091 PLD-like domain HCN55_RS19670 PF07739 TipAS antibiotic-recognition domain HCN55_RS19670 PF13411 MerR HTH family regulatory protein HCN55_RS19675 PF17319 Family of unknown function (DUF5362) HCN55_RS19680 PF13460 NAD(P)H-binding HCN55_RS19685 PF02082 Transcriptional regulator HCN55_RS19690 PF01979 Amidohydrolase family HCN55_RS19690 PF00449 Urease alpha-subunit, N-terminal domain HCN55_RS19695 PF00699 Urease beta subunit HCN55_RS19700 PF00547 Urease, gamma subunit HCN55_RS19715 PF05532 CsbD-like HCN55_RS19725 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_RS19725 PF17874 MalT-like TPR region HCN55_RS19730 PF04055 Radical SAM superfamily HCN55_RS19730 PF06463 Molybdenum Cofactor Synthesis C HCN55_RS19735 PF02634 FdhD/NarQ family HCN55_RS19745 PF00092 von Willebrand factor type A domain HCN55_RS19755 PF00092 von Willebrand factor type A domain HCN55_RS19760 PF08486 Stage II sporulation protein HCN55_RS19765 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HCN55_RS19770 PF08680 TATA-box binding HCN55_RS19775 PF06612 Protein of unknown function (DUF1146) HCN55_RS19785 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HCN55_RS19785 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HCN55_RS19790 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HCN55_RS19790 PF02874 ATP synthase alpha/beta family, beta-barrel domain HCN55_RS19795 PF00231 ATP synthase HCN55_RS19800 PF02874 ATP synthase alpha/beta family, beta-barrel domain HCN55_RS19800 PF00306 ATP synthase alpha/beta chain, C terminal domain HCN55_RS19800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HCN55_RS19805 PF00213 ATP synthase delta (OSCP) subunit HCN55_RS19810 PF00430 ATP synthase B/B' CF(0) HCN55_RS19815 PF00137 ATP synthase subunit C HCN55_RS19820 PF00119 ATP synthase A chain HCN55_RS19825 PF03899 ATP synthase I chain HCN55_RS19835 PF00464 Serine hydroxymethyltransferase HCN55_RS19840 PF04260 Protein of unknown function (DUF436) HCN55_RS19845 PF02502 Ribose/Galactose Isomerase HCN55_RS19850 PF01451 Low molecular weight phosphotyrosine protein phosphatase HCN55_RS19855 PF02659 Putative manganese efflux pump HCN55_RS19860 PF03481 Putative GTP-binding controlling metal-binding HCN55_RS19860 PF01300 Telomere recombination HCN55_RS19870 PF09551 Stage II sporulation protein R (spore_II_R) HCN55_RS19875 PF17094 Uncharacterised protein family (UPF0715) HCN55_RS19880 PF17247 Family of unknown function (DUF5316) HCN55_RS19885 PF17827 PrmC N-terminal domain HCN55_RS19885 PF05175 Methyltransferase small domain HCN55_RS19890 PF00472 RF-1 domain HCN55_RS19890 PF03462 PCRF domain HCN55_RS19895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_RS19900 PF13411 MerR HTH family regulatory protein HCN55_RS19905 PF03547 Membrane transport protein HCN55_RS19910 PF03949 Malic enzyme, NAD binding domain HCN55_RS19910 PF00390 Malic enzyme, N-terminal domain HCN55_RS19915 PF00265 Thymidine kinase HCN55_RS19920 PF01197 Ribosomal protein L31 HCN55_RS19925 PF07497 Rho termination factor, RNA-binding domain HCN55_RS19925 PF07498 Rho termination factor, N-terminal domain HCN55_RS19925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HCN55_RS19935 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HCN55_RS19940 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HCN55_RS19945 PF00923 Transaldolase/Fructose-6-phosphate aldolase HCN55_RS19950 PF01116 Fructose-bisphosphate aldolase class-II HCN55_RS19955 PF00072 Response regulator receiver domain HCN55_RS19960 PF10740 Domain of unknown function (DUF2529) HCN55_RS19965 PF00117 Glutamine amidotransferase class-I HCN55_RS19965 PF06418 CTP synthase N-terminus HCN55_RS19970 PF05066 HB1, ASXL, restriction endonuclease HTH domain HCN55_RS19975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HCN55_RS19975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HCN55_RS19975 PF02770 Acyl-CoA dehydrogenase, middle domain HCN55_RS19980 PF13183 4Fe-4S dicluster domain HCN55_RS19980 PF02754 Cysteine-rich domain HCN55_RS19985 PF13091 PLD-like domain HCN55_RS19990 PF03851 UV-endonuclease UvdE HCN55_RS20000 PF01872 RibD C-terminal domain HCN55_RS20005 PF00664 ABC transporter transmembrane region HCN55_RS20005 PF00005 ABC transporter HCN55_RS20010 PF13396 Phospholipase_D-nuclease N-terminal HCN55_RS20010 PF13091 PLD-like domain HCN55_RS20020 PF02665 Nitrate reductase gamma subunit HCN55_RS20025 PF02613 Nitrate reductase delta subunit HCN55_RS20030 PF13247 4Fe-4S dicluster domain HCN55_RS20030 PF14711 Respiratory nitrate reductase beta C-terminal HCN55_RS20035 PF01568 Molydopterin dinucleotide binding domain HCN55_RS20035 PF00384 Molybdopterin oxidoreductase HCN55_RS20035 PF14710 Respiratory nitrate reductase alpha N-terminal HCN55_RS20045 PF14256 YwiC-like protein HCN55_RS20050 PF00325 Bacterial regulatory proteins, crp family HCN55_RS20050 PF00027 Cyclic nucleotide-binding domain HCN55_RS20055 PF07690 Major Facilitator Superfamily HCN55_RS20060 PF00750 tRNA synthetases class I (R) HCN55_RS20060 PF05746 DALR anticodon binding domain HCN55_RS20060 PF03485 Arginyl tRNA synthetase N terminal domain HCN55_RS20065 PF09148 Domain of unknown function (DUF1934) HCN55_RS20070 PF11420 Bacteriocin subtilosin A HCN55_RS20080 PF13186 Iron-sulfur cluster-binding domain HCN55_RS20080 PF04055 Radical SAM superfamily HCN55_RS20080 PF05402 Coenzyme PQQ synthesis protein D (PqqD) HCN55_RS20090 PF00005 ABC transporter HCN55_RS20100 PF05193 Peptidase M16 inactive domain HCN55_RS20105 PF00675 Insulinase (Peptidase family M16) HCN55_RS20130 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_RS20135 PF11131 Rap-phr extracellular signalling HCN55_RS20140 PF04073 Aminoacyl-tRNA editing domain HCN55_RS20145 PF00491 Arginase family HCN55_RS20150 PF17284 Spermidine synthase tetramerisation domain HCN55_RS20155 PF00905 Penicillin binding protein transpeptidase domain HCN55_RS20155 PF00912 Transglycosylase HCN55_RS20160 PF08741 YwhD family HCN55_RS20165 PF02163 Peptidase family M50 HCN55_RS20170 PF01361 Tautomerase enzyme HCN55_RS20175 PF01047 MarR family HCN55_RS20180 PF02824 TGS domain HCN55_RS20180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HCN55_RS20180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HCN55_RS20180 PF03129 Anticodon binding domain HCN55_RS20185 PF07690 Major Facilitator Superfamily HCN55_RS20190 PF02082 Transcriptional regulator HCN55_RS20200 PF01966 HD domain HCN55_RS20205 PF07293 Protein of unknown function (DUF1450) HCN55_RS20215 PF00892 EamA-like transporter family HCN55_RS20220 PF03099 Biotin/lipoate A/B protein ligase family HCN55_RS20225 PF03466 LysR substrate binding domain HCN55_RS20225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS20230 PF01515 Phosphate acetyl/butaryl transferase HCN55_RS20245 PF00155 Aminotransferase class I and II HCN55_RS20250 PF07690 Major Facilitator Superfamily HCN55_RS20265 PF07883 Cupin domain HCN55_RS20275 PF07690 Major Facilitator Superfamily HCN55_RS20280 PF00324 Amino acid permease HCN55_RS20285 PF01546 Peptidase family M20/M25/M40 HCN55_RS20290 PF00171 Aldehyde dehydrogenase family HCN55_RS20295 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HCN55_RS20295 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HCN55_RS20300 PF17735 Biofilm surface layer A HCN55_RS20305 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HCN55_RS20310 PF04321 RmlD substrate binding domain HCN55_RS20315 PF16363 GDP-mannose 4,6 dehydratase HCN55_RS20320 PF00483 Nucleotidyl transferase HCN55_RS20325 PF04101 Glycosyltransferase family 28 C-terminal domain HCN55_RS20330 PF02348 Cytidylyltransferase HCN55_RS20335 PF03102 NeuB family HCN55_RS20335 PF08666 SAF domain HCN55_RS20340 PF00583 Acetyltransferase (GNAT) family HCN55_RS20345 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HCN55_RS20350 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HCN55_RS20355 PF00535 Glycosyl transferase family 2 HCN55_RS20360 PF09671 Spore coat protein (Spore_GerQ) HCN55_RS20365 PF04241 Protein of unknown function (DUF423) HCN55_RS20370 PF00860 Permease family HCN55_RS20375 PF17261 Family of unknown function (DUF5327) HCN55_RS20380 PF00171 Aldehyde dehydrogenase family HCN55_RS20385 PF03167 Uracil DNA glycosylase superfamily HCN55_RS20390 PF00535 Glycosyl transferase family 2 HCN55_RS20405 PF03551 Transcriptional regulator PadR-like family HCN55_RS20410 PF08543 Phosphomethylpyrimidine kinase HCN55_RS20420 PF00251 Glycosyl hydrolases family 32 N-terminal domain HCN55_RS20420 PF08244 Glycosyl hydrolases family 32 C terminal HCN55_RS20425 PF02378 Phosphotransferase system, EIIC HCN55_RS20425 PF00367 phosphotransferase system, EIIB HCN55_RS20430 PF01226 Formate/nitrite transporter HCN55_RS20435 PF03123 CAT RNA binding domain HCN55_RS20435 PF00874 PRD domain HCN55_RS20445 PF02225 PA domain HCN55_RS20445 PF13860 FlgD Ig-like domain HCN55_RS20445 PF05922 Peptidase inhibitor I9 HCN55_RS20445 PF00082 Subtilase family HCN55_RS20450 PF00296 Luciferase-like monooxygenase HCN55_RS20455 PF00881 Nitroreductase family HCN55_RS20460 PF01098 Cell cycle protein HCN55_RS20465 PF17368 Spore morphogenesis and germination YwcE HCN55_RS20470 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HCN55_RS20475 PF00510 Cytochrome c oxidase subunit III HCN55_RS20480 PF00115 Cytochrome C and Quinol oxidase polypeptide I HCN55_RS20485 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HCN55_RS20485 PF02790 Cytochrome C oxidase subunit II, transmembrane domain HCN55_RS20490 PF04226 Transglycosylase associated protein HCN55_RS20495 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HCN55_RS20495 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HCN55_RS20500 PF08544 GHMP kinases C terminal HCN55_RS20500 PF00288 GHMP kinases N terminal domain HCN55_RS20500 PF10509 Galactokinase galactose-binding signature HCN55_RS20505 PF04138 GtrA-like protein HCN55_RS20510 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS20515 PF08671 Anti-repressor SinI HCN55_RS20520 PF04341 Protein of unknown function, DUF485 HCN55_RS20525 PF00474 Sodium:solute symporter family HCN55_RS20530 PF01323 DSBA-like thioredoxin domain HCN55_RS20535 PF10518 TAT (twin-arginine translocation) pathway signal sequence HCN55_RS20535 PF04261 Dyp-type peroxidase family HCN55_RS20540 PF09375 Imelysin HCN55_RS20545 PF03239 Iron permease FTR1 family HCN55_RS20550 PF02581 Thiamine monophosphate synthase HCN55_RS20555 PF02110 Hydroxyethylthiazole kinase family HCN55_RS20560 PF03466 LysR substrate binding domain HCN55_RS20560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS20565 PF03788 LrgA family HCN55_RS20570 PF04172 LrgB-like family HCN55_RS20575 PF12832 MFS_1 like family HCN55_RS20580 PF09962 Uncharacterized conserved protein (DUF2196) HCN55_RS20585 PF17785 PUA-like domain HCN55_RS20585 PF10672 S-adenosylmethionine-dependent methyltransferase HCN55_RS20590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_RS20595 PF10924 Protein of unknown function (DUF2711) HCN55_RS20600 PF02378 Phosphotransferase system, EIIC HCN55_RS20605 PF00082 Subtilase family HCN55_RS20610 PF02378 Phosphotransferase system, EIIC HCN55_RS20610 PF00367 phosphotransferase system, EIIB HCN55_RS20615 PF03123 CAT RNA binding domain HCN55_RS20615 PF00874 PRD domain HCN55_RS20620 PF01501 Glycosyl transferase family 8 HCN55_RS20625 PF09529 Integral membrane protein (intg_mem_TP0381) HCN55_RS20630 PF01047 MarR family HCN55_RS20635 PF01479 S4 domain HCN55_RS20635 PF00579 tRNA synthetases class I (W and Y) HCN55_RS20640 PF02225 PA domain HCN55_RS20640 PF04389 Peptidase family M28 HCN55_RS20645 PF04607 Region found in RelA / SpoT proteins HCN55_RS20650 PF01040 UbiA prenyltransferase family HCN55_RS20660 PF12459 D-Ala-teichoic acid biosynthesis protein HCN55_RS20665 PF13193 AMP-binding enzyme C-terminal domain HCN55_RS20665 PF00501 AMP-binding enzyme HCN55_RS20670 PF03062 MBOAT, membrane-bound O-acyltransferase family HCN55_RS20675 PF00550 Phosphopantetheine attachment site HCN55_RS20680 PF04914 DltD protein HCN55_RS20685 PF00106 short chain dehydrogenase HCN55_RS20690 PF01063 Amino-transferase class IV HCN55_RS20695 PF11975 Family 4 glycosyl hydrolase C-terminal domain HCN55_RS20695 PF02056 Family 4 glycosyl hydrolase HCN55_RS20700 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HCN55_RS20705 PF02378 Phosphotransferase system, EIIC HCN55_RS20710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HCN55_RS20715 PF05043 Mga helix-turn-helix domain HCN55_RS20715 PF00874 PRD domain HCN55_RS20715 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HCN55_RS20715 PF08279 HTH domain HCN55_RS20725 PF02245 Methylpurine-DNA glycosylase (MPG) HCN55_RS20730 PF00199 Catalase HCN55_RS20730 PF06628 Catalase-related immune-responsive HCN55_RS20735 PF07690 Major Facilitator Superfamily HCN55_RS20740 PF12679 ABC-2 family transporter protein HCN55_RS20745 PF13732 Domain of unknown function (DUF4162) HCN55_RS20745 PF00005 ABC transporter HCN55_RS20750 PF13396 Phospholipase_D-nuclease N-terminal HCN55_RS20760 PF17280 Family of unknown function (DUF5345) HCN55_RS20765 PF04542 Sigma-70 region 2 HCN55_RS20765 PF08281 Sigma-70, region 4 HCN55_RS20770 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HCN55_RS20775 PF01256 Carbohydrate kinase HCN55_RS20780 PF00005 ABC transporter HCN55_RS20780 PF00664 ABC transporter transmembrane region HCN55_RS20785 PF00005 ABC transporter HCN55_RS20785 PF00664 ABC transporter transmembrane region HCN55_RS20790 PF02322 Cytochrome bd terminal oxidase subunit II HCN55_RS20795 PF01654 Cytochrome bd terminal oxidase subunit I HCN55_RS20800 PF03390 2-hydroxycarboxylate transporter family HCN55_RS20805 PF01435 Peptidase family M48 HCN55_RS20815 PF01522 Polysaccharide deacetylase HCN55_RS20820 PF00005 ABC transporter HCN55_RS20820 PF17912 MalK OB fold domain HCN55_RS20820 PF03459 TOBE domain HCN55_RS20825 PF13556 PucR C-terminal helix-turn-helix domain HCN55_RS20830 PF00171 Aldehyde dehydrogenase family HCN55_RS20835 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HCN55_RS20835 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HCN55_RS20840 PF11611 Domain of unknown function (DUF4352) HCN55_RS20845 PF16363 GDP-mannose 4,6 dehydratase HCN55_RS20850 PF01161 Phosphatidylethanolamine-binding protein HCN55_RS20855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS20855 PF03466 LysR substrate binding domain HCN55_RS20865 PF07730 Histidine kinase HCN55_RS20870 PF00072 Response regulator receiver domain HCN55_RS20870 PF00196 Bacterial regulatory proteins, luxR family HCN55_RS20875 PF07687 Peptidase dimerisation domain HCN55_RS20875 PF01546 Peptidase family M20/M25/M40 HCN55_RS20885 PF04525 LURP-one-related HCN55_RS20890 PF01717 Cobalamin-independent synthase, Catalytic domain HCN55_RS20895 PF01717 Cobalamin-independent synthase, Catalytic domain HCN55_RS20905 PF01144 Coenzyme A transferase HCN55_RS20910 PF01144 Coenzyme A transferase HCN55_RS20920 PF08241 Methyltransferase domain HCN55_RS20925 PF07662 Na+ dependent nucleoside transporter C-terminus HCN55_RS20925 PF01773 Na+ dependent nucleoside transporter N-terminus HCN55_RS20940 PF00199 Catalase HCN55_RS20940 PF06628 Catalase-related immune-responsive HCN55_RS20940 PF18011 C-terminal domain found in long catalases HCN55_RS20945 PF03600 Citrate transporter HCN55_RS20950 PF00722 Glycosyl hydrolases family 16 HCN55_RS20955 PF00874 PRD domain HCN55_RS20955 PF03123 CAT RNA binding domain HCN55_RS20965 PF11700 Vacuole effluxer Atg22 like HCN55_RS20970 PF00270 DEAD/DEAH box helicase HCN55_RS20970 PF03880 DbpA RNA binding domain HCN55_RS20970 PF00271 Helicase conserved C-terminal domain HCN55_RS20975 PF13472 GDSL-like Lipase/Acylhydrolase family HCN55_RS20990 PF14176 YxiJ-like protein HCN55_RS20995 PF10898 Protein of unknown function (DUF2716) HCN55_RS21030 PF05593 RHS Repeat HCN55_RS21035 PF00892 EamA-like transporter family HCN55_RS21040 PF00582 Universal stress protein family HCN55_RS21045 PF00232 Glycosyl hydrolase family 1 HCN55_RS21050 PF02378 Phosphotransferase system, EIIC HCN55_RS21050 PF00367 phosphotransferase system, EIIB HCN55_RS21050 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HCN55_RS21055 PF18593 CdiI immunity protein HCN55_RS21065 PF04740 LXG domain of WXG superfamily HCN55_RS21065 PF14449 Pre-toxin TG HCN55_RS21075 PF16888 Domain of unknown function (DUF5082) HCN55_RS21080 PF16369 C-terminal lipocalin-like domain HCN55_RS21080 PF04616 Glycosyl hydrolases family 43 HCN55_RS21090 PF09021 HutP HCN55_RS21095 PF00221 Aromatic amino acid lyase HCN55_RS21100 PF01175 Urocanase Rossmann-like domain HCN55_RS21100 PF17391 Urocanase N-terminal domain HCN55_RS21100 PF17392 Urocanase C-terminal domain HCN55_RS21105 PF01979 Amidohydrolase family HCN55_RS21110 PF00491 Arginase family HCN55_RS21115 PF00324 Amino acid permease HCN55_RS21120 PF00591 Glycosyl transferase family, a/b domain HCN55_RS21120 PF02885 Glycosyl transferase family, helical bundle domain HCN55_RS21120 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HCN55_RS21125 PF07662 Na+ dependent nucleoside transporter C-terminus HCN55_RS21125 PF01773 Na+ dependent nucleoside transporter N-terminus HCN55_RS21130 PF01791 DeoC/LacD family aldolase HCN55_RS21135 PF04198 Putative sugar-binding domain HCN55_RS21140 PF06724 Domain of Unknown Function (DUF1206) HCN55_RS21145 PF04346 Ethanolamine utilisation protein, EutH HCN55_RS21150 PF03972 MmgE/PrpD family HCN55_RS21155 PF01546 Peptidase family M20/M25/M40 HCN55_RS21155 PF07687 Peptidase dimerisation domain HCN55_RS21160 PF00005 ABC transporter HCN55_RS21165 PF00528 Binding-protein-dependent transport system inner membrane component HCN55_RS21170 PF00497 Bacterial extracellular solute-binding proteins, family 3 HCN55_RS21175 PF00583 Acetyltransferase (GNAT) family HCN55_RS21180 PF00296 Luciferase-like monooxygenase HCN55_RS21190 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family HCN55_RS21205 PF11631 Protein of unknown function (DUF3255) HCN55_RS21225 PF01497 Periplasmic binding protein HCN55_RS21230 PF06486 Protein of unknown function (DUF1093) HCN55_RS21235 PF02687 FtsX-like permease family HCN55_RS21240 PF00005 ABC transporter HCN55_RS21245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS21250 PF00072 Response regulator receiver domain HCN55_RS21250 PF00486 Transcriptional regulatory protein, C terminal HCN55_RS21255 PF01116 Fructose-bisphosphate aldolase class-II HCN55_RS21260 PF01261 Xylose isomerase-like TIM barrel HCN55_RS21265 PF01261 Xylose isomerase-like TIM barrel HCN55_RS21270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HCN55_RS21270 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HCN55_RS21275 PF07690 Major Facilitator Superfamily HCN55_RS21280 PF01261 Xylose isomerase-like TIM barrel HCN55_RS21285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HCN55_RS21285 PF00205 Thiamine pyrophosphate enzyme, central domain HCN55_RS21285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HCN55_RS21290 PF00294 pfkB family carbohydrate kinase HCN55_RS21295 PF04962 KduI/IolB family HCN55_RS21300 PF00171 Aldehyde dehydrogenase family HCN55_RS21305 PF08220 DeoR-like helix-turn-helix domain HCN55_RS21305 PF00455 DeoR C terminal sensor domain HCN55_RS21310 PF00248 Aldo/keto reductase family HCN55_RS21320 PF10850 Protein of unknown function (DUF2653) HCN55_RS21325 PF00083 Sugar (and other) transporter HCN55_RS21330 PF00183 Hsp90 protein HCN55_RS21345 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS21350 PF00171 Aldehyde dehydrogenase family HCN55_RS21355 PF00583 Acetyltransferase (GNAT) family HCN55_RS21360 PF08007 Cupin superfamily protein HCN55_RS21365 PF08241 Methyltransferase domain HCN55_RS21370 PF05402 Coenzyme PQQ synthesis protein D (PqqD) HCN55_RS21380 PF00733 Asparagine synthase HCN55_RS21380 PF13537 Glutamine amidotransferase domain HCN55_RS21385 PF07690 Major Facilitator Superfamily HCN55_RS21390 PF13570 PQQ-like domain HCN55_RS21390 PF01011 PQQ enzyme repeat HCN55_RS21390 PF13360 PQQ-like domain HCN55_RS21395 PF17369 Family of unknown function (DUF5391) HCN55_RS21400 PF06271 RDD family HCN55_RS21405 PF04235 Protein of unknown function (DUF418) HCN55_RS21410 PF07883 Cupin domain HCN55_RS21415 PF00440 Bacterial regulatory proteins, tetR family HCN55_RS21420 PF00106 short chain dehydrogenase HCN55_RS21425 PF01047 MarR family HCN55_RS21430 PF03788 LrgA family HCN55_RS21435 PF04172 LrgB-like family HCN55_RS21440 PF04230 Polysaccharide pyruvyl transferase HCN55_RS21445 PF02595 Glycerate kinase family HCN55_RS21450 PF07729 FCD domain HCN55_RS21450 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS21455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HCN55_RS21455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HCN55_RS21460 PF02447 GntP family permease HCN55_RS21465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HCN55_RS21465 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HCN55_RS21470 PF00578 AhpC/TSA family HCN55_RS21475 PF07992 Pyridine nucleotide-disulphide oxidoreductase HCN55_RS21475 PF13192 Thioredoxin domain HCN55_RS21480 PF00232 Glycosyl hydrolase family 1 HCN55_RS21490 PF07702 UTRA domain HCN55_RS21490 PF00392 Bacterial regulatory proteins, gntR family HCN55_RS21505 PF00005 ABC transporter HCN55_RS21515 PF04055 Radical SAM superfamily HCN55_RS21525 PF06874 Firmicute fructose-1,6-bisphosphatase HCN55_RS21530 PF10088 Uncharacterised protein conserved in bacteria (DUF2326) HCN55_RS21530 PF13476 AAA domain HCN55_RS21540 PF00149 Calcineurin-like phosphoesterase HCN55_RS21545 PF02590 Predicted SPOUT methyltransferase HCN55_RS21550 PF14116 YyzF-like protein HCN55_RS21560 PF08240 Alcohol dehydrogenase GroES-like domain HCN55_RS21560 PF00107 Zinc-binding dehydrogenase HCN55_RS21570 PF10852 Protein of unknown function (DUF2651) HCN55_RS21585 PF00583 Acetyltransferase (GNAT) family HCN55_RS21590 PF18801 response regulator aspartate phosphatase H, N terminal HCN55_RS21600 PF00491 Arginase family HCN55_RS21605 PF00324 Amino acid permease HCN55_RS21610 PF00202 Aminotransferase class-III HCN55_RS21615 PF13426 PAS domain HCN55_RS21615 PF00158 Sigma-54 interaction domain HCN55_RS21615 PF02954 Bacterial regulatory protein, Fis family HCN55_RS21635 PF13180 PDZ domain HCN55_RS21640 PF00753 Metallo-beta-lactamase superfamily HCN55_RS21645 PF09648 YycH protein HCN55_RS21650 PF07435 YycH protein HCN55_RS21655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HCN55_RS21655 PF00672 HAMP domain HCN55_RS21655 PF13426 PAS domain HCN55_RS21655 PF00512 His Kinase A (phospho-acceptor) domain HCN55_RS21660 PF00072 Response regulator receiver domain HCN55_RS21660 PF00486 Transcriptional regulatory protein, C terminal HCN55_RS21685 PF00709 Adenylosuccinate synthetase HCN55_RS21690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_RS21695 PF03796 DnaB-like helicase C terminal domain HCN55_RS21695 PF00772 DnaB-like helicase N terminal domain HCN55_RS21700 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) HCN55_RS21710 PF14174 YycC-like protein HCN55_RS21715 PF07690 Major Facilitator Superfamily HCN55_RS21720 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase HCN55_RS21725 PF01281 Ribosomal protein L9, N-terminal domain HCN55_RS21725 PF03948 Ribosomal protein L9, C-terminal domain HCN55_RS21730 PF01368 DHH family HCN55_RS21730 PF02272 DHHA1 domain HCN55_RS21735 PF09991 Predicted membrane protein (DUF2232) HCN55_RS21745 PF07875 Coat F domain HCN55_RS21750 PF01638 HxlR-like helix-turn-helix HCN55_RS21755 PF02833 DHHA2 domain HCN55_RS21755 PF01368 DHH family HCN55_RS21770 PF07690 Major Facilitator Superfamily HCN55_RS21785 PF10916 Protein of unknown function (DUF2712) HCN55_RS21790 PF10920 Protein of unknown function (DUF2705) HCN55_RS21800 PF10920 Protein of unknown function (DUF2705) HCN55_RS21805 PF00005 ABC transporter HCN55_RS21820 PF13474 SnoaL-like domain HCN55_RS21825 PF00805 Pentapeptide repeats (8 copies) HCN55_RS21830 PF07690 Major Facilitator Superfamily HCN55_RS21835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HCN55_RS21835 PF03466 LysR substrate binding domain HCN55_RS21840 PF13673 Acetyltransferase (GNAT) domain HCN55_RS21855 PF00753 Metallo-beta-lactamase superfamily HCN55_RS21860 PF01047 MarR family HCN55_RS21865 PF13673 Acetyltransferase (GNAT) domain HCN55_RS21875 PF00583 Acetyltransferase (GNAT) family HCN55_RS21880 PF04237 YjbR HCN55_RS21885 PF01872 RibD C-terminal domain HCN55_RS21895 PF07690 Major Facilitator Superfamily HCN55_RS21900 PF08050 Tetracycline resistance leader peptide HCN55_RS21905 PF03190 Protein of unknown function, DUF255 HCN55_RS21910 PF13411 MerR HTH family regulatory protein HCN55_RS21915 PF00892 EamA-like transporter family HCN55_RS21920 PF03190 Protein of unknown function, DUF255 HCN55_RS21925 PF02517 CPBP intramembrane metalloprotease HCN55_RS21930 PF00083 Sugar (and other) transporter HCN55_RS21935 PF14602 Hexapeptide repeat of succinyl-transferase HCN55_RS21935 PF12464 Maltose acetyltransferase HCN55_RS21940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HCN55_RS21945 PF00356 Bacterial regulatory proteins, lacI family HCN55_RS21945 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HCN55_RS21950 PF03372 Endonuclease/Exonuclease/phosphatase family HCN55_RS21955 PF01084 Ribosomal protein S18 HCN55_RS21960 PF00436 Single-strand binding protein family HCN55_RS21965 PF01250 Ribosomal protein S6 HCN55_RS21970 PF01926 50S ribosome-binding GTPase HCN55_RS21970 PF06071 Protein of unknown function (DUF933) HCN55_RS21975 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HCN55_RS21975 PF01568 Molydopterin dinucleotide binding domain HCN55_RS21975 PF00384 Molybdopterin oxidoreductase HCN55_RS21980 PF06107 Bacterial protein of unknown function (DUF951) HCN55_RS21990 PF06866 Protein of unknown function (DUF1256) HCN55_RS21995 PF02195 ParB-like nuclease domain HCN55_RS21995 PF17762 HTH domain found in ParB protein HCN55_RS22000 PF13614 AAA domain HCN55_RS22005 PF06713 Bacterial PH domain HCN55_RS22010 PF17762 HTH domain found in ParB protein HCN55_RS22010 PF02195 ParB-like nuclease domain HCN55_RS22015 PF02527 rRNA small subunit methyltransferase G HCN55_RS22020 PF13932 GidA associated domain HCN55_RS22020 PF01134 Glucose inhibited division protein A HCN55_RS22025 PF01926 50S ribosome-binding GTPase HCN55_RS22025 PF12631 MnmE helical domain HCN55_RS22025 PF10396 GTP-binding protein TrmE N-terminus HCN55_RS22030 PF14804 Jag N-terminus HCN55_RS22030 PF01424 R3H domain HCN55_RS22035 PF02096 60Kd inner membrane protein HCN55_RS22040 PF00825 Ribonuclease P HCN55_RS22045 PF00468 Ribosomal protein L34