        rlbA NONE
        recF NONE
        remB NONE
        gyrB    6831 ..    6856 + -10.6  -5.24129   ATCTAATCATAAAAA         GCCTTATTTC CAATAA GAAATAAGGC          TTTTTTCTGAACAAG 100 35
        gyrA    9504 ..    9524 + -13.3  -5.39721   GAAGTGTGAAAAAAA            GCGCAGCTG AAA TAGCTGCGC            TTTTTTGTGTCATAA 100 32
HCN55_RS00040   11473 ..   11485 +  -7.7  -3.09933   TTGTTTAGTTTTGAA                GGAAC TTT GTTCC                TTGAATAAGTTAAGA  65 96
HCN55_RS00045 NONE
HCN55_RS00050   11725 ..   11735 +  -5.4  -4.42235   TAGTAACACAAGATA                 TCAC ATA GTGA                 TTCTTTTTAACGGTT  70 85
HCN55_RS00055   14708 ..   14725 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf   14855 ..   14873 + -14.6  -5.80003   CCAAGCAAGCTTAAA             CCCAGCTC AAT GAGCTGGG             TTTTTTGTTTGTTAA 100 35
        guaB   17444 ..   17468 +  -9.3   -5.9873   ACAAATTAAAAACAT          TTGACAGGGTC TCT GACTCTGTCTA          TTTTTTTTATACTGA 100 50
HCN55_RS00075   18914 ..   18937 +    -6  -3.63068   TTTAATCAATTGAAA          GAGCTCTGAT GGAT GTTAGGGCTC           TTTCGCGTAATATAC  61 36
        pdxS NONE
        pdxT   20845 ..   20876 + -15.2  -5.48213   AGGGTGGCAACGCGA      GAGCTCTCGTCCCT TTAT GGGGATGAGGGCTC       TTTTTATTTTCGATA 100 274
        serS   22206 ..   22227 + -10.1  -4.96646   CGTAAATTATGGAAA           GGCGTGCCT GACA AGGTGCGCC            TTTTTGCTTATGTAA 100 36
HCN55_RS00095   22473 ..   22495 +  -8.4  -5.79595   TTGGAGATTGTTTTG           TCCGTTGCAT TCG GTGCGGCGGA           TTTTTTATTTTAAAG 100 76
HCN55_RS00105 NONE
        bofA   23358 ..   23373 +  -3.2  -5.00616   ATTCTAATATACGTC              GCTGAT GACG AACAGC               TTTTTTGAAAAGAAA  70 78
HCN55_RS00115   25173 ..   25185 +  -7.7  -3.09933   TTGTTTAGTTTTGAA                GGAAC TTT GTTCC                TTGAATAAGTTAAGA  65 96
HCN55_RS00120 NONE
HCN55_RS00125   25425 ..   25435 +  -5.4  -4.42235   TAGTAACACAAGATA                 TCAC ATA GTGA                 TTCTTTTTAACGGTT  70 85
HCN55_RS00130   28484 ..   28502 +    -6  -4.49556   GTGAGAAACGCCCAG             TACCTTCA TCC TGAAGGCA             TTTGTTTGGTGGCGA  73 131
         rrf   28632 ..   28650 +   -11  -5.68438   CCAAGCAAGCTTAAA             CCCAGCTT AAT GAGCTGGG             TTTTTTGTTTACTCA 100 35
        csfB   28995 ..   29008 +  -6.7  -5.70829   GCCATTATATTCATA               GACCT GAAA AGGTC                TTTTTTTGTACTCTT  93 25
HCN55_RS00145 NONE
HCN55_RS00150   30912 ..   30924 +  -4.8  -2.89511   AAGGAAAGATGATTA                CCAG TAAGT CTGG                CTTTAAGTTCTGTCA  50 29
HCN55_RS00155 NONE
HCN55_RS00160   33047 ..   33061 +  -2.9  -3.38218   GTGATCGATGAAGCG               TTGAA AAAAA TTCAA               TTGTGACCTGTTTCC  46 5
        darA   33448 ..   33464 +  -3.7  -4.13014   TATTTGTCCTTCCAG              TCGATGA ATT TCATCAA              TTTTAAGGATCTGAA  58 3
HCN55_RS00170 NONE
        holB NONE
        ricT NONE
        yabA   36135 ..   36157 +  -8.4  -4.58663   AAAAAATAGGGAAAA           GGCTTCCG CATAAGA CGGGAGCC           TTTTTCAAAGGTACT  88 32
HCN55_RS00190 NONE
HCN55_RS00195 NONE
        rsmI   38075 ..   38098 +  -9.7  -5.24129   TAAGCAATAAAAAAA          CGTTCTTGT GTCATA ACAAGAACG           TTTTTTGTACAAGAA 100 31
        metG   40905 ..   40946 + -10.3  -3.34398   TTAAATAATGATAAA CAAAAGGTGTTTCACGTGT AACA ATTCGTCGAACACCTTTTG  TGTTTCGACAAGAAA  80 33
HCN55_RS00215   41815 ..   41833 +  -3.8  -3.86524   AGTTCTACATGCTTT             CTTCTCCT CAT AGGATAGG             TTTGTCGACAAGTCT  56 97
HCN55_RS00220   43229 ..   43249 +    -9  -5.68023   ATATACTTATGTATT            CAGAGGGT TTTGC GCCCTCTG            TTTTTTTCGTTATAA 100 42
        rnmV NONE
        rsmA   44777 ..   44794 +  -9.9  -5.45802   AACGGATTGTATAAA             GCCCTTT TCTA AAAGGGC              TTTTTGTTTTGCGCA 100 14
        prtG   45833 ..   45855 +  -9.9  -5.80951   ATTAACAGTTGAAAA           CCTGCATAG GAGAG CTATGCGGG           TTTTTTATTTTACAT 100 36
HCN55_RS00240   46297 ..   46319 +  -8.5  -5.46706   GTGGCATTTTAACGG           GCAGTGAAC CTTTT GTTTACTGC           TTTTTGTTTTGCCCT 100 29
HCN55_RS00245   46648 ..   46670 +  -9.8  -6.09196   CGATAAGGATGTGAC           CCGGGGGACG TGC TGTTCCCTGG           TTTTTTTATTTTGGA 100 35
HCN55_RS00250 NONE
        purR NONE
HCN55_RS00260   48951 ..   48975 +  -8.6  -5.67283   GAAATAATAAGAAAA          GTGATTCTGG GAGAG CCGGGATCAC          TTTTTTATTTACCTT 100 34
       spoVG   49448 ..   49489 +  -5.3  -5.33848   ATAACCAAAAAGCAA GGACTGCTG--AAAGGGCT GACATA AGCCTTTTGCCGGCGGTCC TTTTTTAATTCTGAT  86 44
        glmU NONE
HCN55_RS00275 NONE
HCN55_RS00280   52676 ..   52700 +  -7.9  -4.46926   ACAATAATAGCTTAA          GGCGTAACC CTCCCGC GGTTACGTC          TTTTGTGCTAGAATG  82 34
HCN55_RS00285 NONE
         fin   53633 ..   53661 +  -8.9   -5.1523   ATTTATTCAATAAAA        AGCTTTGGTGTAG ACA CTAGACCAAAGCG        TTTTTCTGTTCTCGC 100 28
         mfd   57251 ..   57261 +    -4  -3.83205   TTTGTTACTCTCTGG                 TGTA TAT TACA                 TTTGATGTGACGGAT  56 43
       spoVT   57940 ..   57965 +  -9.1   -4.7497   AAATAGGTATGTAAA         GAACAGC-TCTC CTT GGGACGCTGTTC         TTTTTCATGCGTGCC 100 60
HCN55_RS00305 NONE
        mazG NONE
HCN55_RS00315 NONE
        yabP NONE
        yabQ NONE
       divIC   62827 ..   62844 +  -3.5  -2.90075   GTAGCCTTGTTGACA             CTTAAAT TTTT ATTTAGG              TATAATTAAGCAAAC  44 37
HCN55_RS00335   63310 ..   63333 +  -8.9  -5.58179   TATAAAATAAATGAA          GCATCCGTT CATCCC GACGGATGC           TTTTTTATTATCCTC 100 53
HCN55_RS00340 NONE
HCN55_RS00345   63619 ..   63641 +  -8.5  -5.85011   GGTCATCCTAACAAA           TCGGTTTCT CTTGC AGAAGCCGA           TTTTTTTCATTTTTA 100 33
      spoIIE   66343 ..   66354 +  -2.2  -3.21276   GGGAATATATGAATC                TGAG AATC CTCG                 TATTCTCCAGGAGGA  43 77
HCN55_RS00355 NONE
        prkT   68154 ..   68165 +    -3  -3.61356   GGTTGAAAGTGTTAG                GATA TGAA TATC                 TTTAAAATACCTGCT  48 84
        tilS NONE
         hpt NONE
        ftsH   72189 ..   72208 + -11.4  -5.72616   TTCTTTCTAAAAAAA            CTGCCGGC TGAC GCTGGCAG             TTTTTTTATGTAAAT 100 47
HCN55_RS00380 NONE
        hslO   74018 ..   74038 + -11.9  -4.98531   TTCGTGACCAAACTA            CCCGCTAAG CTC TTTAGCGGG            TTTTTAATTTGAGAA 100 18
HCN55_RS00390 NONE
        cysK   75980 ..   75997 + -12.7  -5.88197   TAAAAAAAGCCAAAA             CTCCCGG TTCG CCGGGAG              TTTTTTTATATTTCG 100 38
HCN55_RS00400 NONE
        pabA NONE
        pabC NONE
        folP NONE
        folB NONE
        folK NONE
HCN55_RS00430 NONE
        dusB   81929 ..   81949 +  -5.4  -5.14894   TCTATTTGCTGCTCA            CTGCTAGT TTTAC GCTGGCAG            TTTTTCTGCTTTTTT  81 49
        lysS   83504 ..   83537 + -10.4  -4.68424   AACGCTAATAAAAAA     GAGCGGTATCCT CCATAGGGAA AGGATGCCGCTC      TTTTTAAATCCCTTA  95 33
HCN55_RS00445   85421 ..   85446 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
HCN55_RS00450   88484 ..   88501 +  -8.5  -4.49556   ATCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf   88624 ..   88639 +  -7.6  -3.31322   GACGCCGCCAAGCAA              TTGCAC GTTA GTGCAA               TTATGGAGGATTAGC  67 28
HCN55_RS00460 NONE
HCN55_RS00465 NONE
HCN55_RS00470 NONE
HCN55_RS00475   89039 ..   89050 +  -2.2  -3.09516   AACTGGACATCCTGT                CTGC GGAA GTAG                 TTCAGTGGTAGAACA  42 64
HCN55_RS00480 NONE
HCN55_RS00485   89205 ..   89215 +  -2.4  -3.95435   TGCCGGTTCAAGTCC                 GGCC CTC GGCA                 TTATGTTTTGCGCCC  51 15
HCN55_RS00490 NONE
HCN55_RS00495 NONE
HCN55_RS00500   89644 ..   89660 +  -2.3   -3.8709   CGCACAGCGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  51 179
HCN55_RS00505   91277 ..   91302 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
HCN55_RS00510   94340 ..   94357 +  -8.5  -4.49556   ATCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf   94487 ..   94505 + -14.6  -5.63645   CCAAGCAAGCTTAAA             CCCAGCTC AAT GAGCTGGG             TTTTTTGTATTTTGG 100 35
        ctsR NONE
        mcsA NONE
HCN55_RS00530 NONE
HCN55_RS00535   99289 ..   99319 +  -9.9  -2.89602   TATAGAAGACGGAAA       TGAGGCATACA GCATGTAAG TGTATGCCTCA       CTTTCATATCAAGAA  75 41
        radA NONE
        disA NONE
HCN55_RS00550 NONE
HCN55_RS00555 NONE
HCN55_RS00560 NONE
HCN55_RS00565  105990 ..  106020 + -14.9   -5.8187   AACCGCGCGGTTAAA      GCGTCTCTGTCATG TTTA CATG-CAGAGACGC       TTTTTTTATTGGGTA 100 248
        cysE NONE
        cysS NONE
HCN55_RS00580 NONE
        rlmB NONE
        rae1 NONE
        sigH NONE
        rpmG NONE
        secE  111028 ..  111040 +  -6.9  -5.56673   TATTACTTGCCAAAA                CCCGT TCA GCGGG                TTTTTTATTGTGGCT 100 73
        nusG NONE
        rplK  112299 ..  112328 + -13.7  -3.72027   AATTTGTTTCTTGTC       GGGTTGCGAGTTT TAAC AAGTTCGCAACCC        TTATTCGTGGGAGGT 100 39
        rplA  113229 ..  113249 + -15.5   -4.9792   ATGCTTGTATATACA            GCCTCCATG TCT CATGGAGGC            TTTTTATATGGAATC 100 176
HCN55_RS00625 NONE
        rplL  114270 ..  114290 +  -9.7  -5.29846   TTACCTGTAGGGGAA            GCTCGCTTT TAT GAGGCGAGC            TTTTTCTTTGCCATT 100 48
HCN55_RS00635  115078 ..  115098 +    -4   -5.8901   TTTGTTTTTGGATGT            GGTTTTCT TAATT AGAAACCC            TTTTTTCTTTTGTCT  90 161
        rpoB NONE
        rpoC  122437 ..  122480 + -14.1  -3.86346   GTTGAATAACTGATT TAACTCTGCTGAAAGACTG CAAAAA CAGTCTTTCAGCAGATATA TTTATGAAAAAGTCA 100 32
HCN55_RS00650  122866 ..  122900 +  -8.8  -4.68528   TTTATAACGTACTTT     TGTTTTTGCGTAAGAT TCC ATCTTGTGTAAAGACA     TTGTTTTTTGCCTTT  90 34
        rpsL NONE
        rpsG NONE
        fusA  126081 ..  126098 +  -8.5   -3.2918   TTGTAAGATGAGGAA             GTGAAAG CTTT CTTTCAC              TTCCTATCACTCTAT  70 75
         tuf  127357 ..  127376 + -13.6  -6.01187   TAGTATGGTTTTAAA            CGAGACCC CTGT GGGTCTCG             TTTTTTTGTTTGCTT 100 41
HCN55_RS00675  128549 ..  128580 +    -5  -4.82901   GAGGTTGCTGACACA      CCCGGCCGCTTTGC CATG GCAAGGTGTTCAGG       TTTTTCTCACGGAGA  74 177
        rpsJ  128932 ..  128942 +  -2.6  -3.34962   GTGTCGATATCGAAA                 TTAA ACT TTAA                 TTCTAAAATATAGAA  46 15
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY  139092 ..  139117 + -10.5  -3.14132   ATTTATGAAAAACTA         GAGGAAATGGA TTTA TCCATTCCCTC          TTAATAAAGAGAGGA  79 25
HCN55_RS00790 NONE
         map  140613 ..  140633 +  -2.6   -3.8917   CTTGGGTGAACATTG            GCAAGA CCGAATTCA TCTTGC            TTCTTGTCGTTGGAA  52 95
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK  142137 ..  142170 +  -5.4  -3.66666   CTAAACAATGGGGAA     TTTCGGATGGAATC TCATAT GATTCTATTCGAGG      TTTCGACGTTTTGAA  60 138
HCN55_RS00825  143146 ..  143166 +  -4.7  -2.55002   CGCAAAGACGATTGA            CTAGTTTCC CTT GTGAACTAG            GATTTTCGTGTGTTT  49 26
        rplQ  143566 ..  143579 +  -3.9  -2.85346   ACGGAGCACCAATGG               CAATT ATCG AATTG                GTTTAATCACATATT  46 6
HCN55_RS00835 NONE
HCN55_RS00840 NONE
HCN55_RS00845 NONE
        truA  147002 ..  147012 +    -4  -3.34398   AAAGTTATAAGATAT                 CATA TGG TATG                 TATTTCAACCCCACG  50 77
        rplM NONE
        rpsI  147980 ..  148002 +   -12  -5.65927   TTACGTTTTCAAAAA           GCTCTCGACC TTG GGTTGGGAGC           TTTTTTCTTTCAATA 100 43
HCN55_RS00865  149196 ..  149219 +  -3.1  -5.14563   GTGAAAGTATGAAAA          GCAGCGACCT GTTAG AGGG-GCTGC          TTTTTTCATAACCAA  73 29
HCN55_RS00870 NONE
        cwlD  150582 ..  150601 +  -7.1  -4.85396   CACAGAAAAAGGAGA            CCCTCCG GAGTAA TGGAGGG             TTTTCTTGTGGTTCT  83 13
        salA  151758 ..  151776 +   -11  -2.95234   GTATAAAAAGGTGAA             CCGGGATT CCA GATCCCGG             CTTTCCCTTTATTCA  79 35
HCN55_RS00890  153200 ..  153214 +  -4.2  -3.40639   ATGTAAAAGAATAAT               GTCTCC ACC GGAAAC               TTGCTTGGTCACATT  50 176
HCN55_RS00900  155780 ..  155805 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
HCN55_RS00905  158843 ..  158860 +  -8.5  -4.49556   ATCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf  158972 ..  158982 +  -2.4  -3.21235   TGTGAGAGTAGGACG                 CCGC CAA GCAG                 ATTTATTAATTCTAC  43 17
HCN55_RS00915  159081 ..  159129 +  -5.1  -3.09516   ATCGGTCGTAGGTTC GAATCCTACCTGCGGAGCCATTG CTT CCATAGCTCAGCAGGTAGAGCAC TTCCATGGTAAGGAA  52 6
HCN55_RS00920  159194 ..  159214 +    -4  -5.80364   ATGTATTATTACCAA            GGTTTCTC ATAAG GAGAAAGC            TTTTTTTATTGCGAT  90 42
HCN55_RS00925  159309 ..  159323 +    -5  -3.43564   GTCTTCCGCTCCATT               TATCCT AAC GGGATA               TTGTAAATTGAATTG  55 28
HCN55_RS00930 NONE
HCN55_RS00935 NONE
HCN55_RS00940  159756 ..  159772 +  -2.3   -3.8709   CGCACAGCGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  51 179
HCN55_RS00945  161389 ..  161414 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
HCN55_RS00950  164452 ..  164469 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf  164592 ..  164607 +    -4  -5.01732   GACGCCGCCAAGCAA              TTGCAC ATTA GTGTAA               TTTTTTAAAAAAGTT  72 28
HCN55_RS00960  166391 ..  166416 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
HCN55_RS00965  169454 ..  169471 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf  169601 ..  169619 + -14.6   -5.8901   CCAAGCAAGCTTAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTGTTTTATAT 100 35
HCN55_RS00975  171808 ..  171830 +  -9.2  -5.37043   GCATAAAATAGAGAA           GCCCAGAT GAATGAG ATCTGGGC           TTTTTTATATAACAT 100 35
HCN55_RS00980  172870 ..  172889 +  -9.3   -5.1287   GAAGGCATAAAAAAA            CCGCTCA TAGGGT TGAGCGG             TTTTTTCCGTATAGC 100 31
HCN55_RS01050 NONE
HCN55_RS01055 NONE
HCN55_RS01060  187718 ..  187728 +  -2.6  -4.52589   CTCTTGCCGGCACTG                 TTTT TTC AAAA                 TTTTATGTGGAGGGG  60 27
HCN55_RS01065 NONE
HCN55_RS01070  187904 ..  187926 + -10.7  -5.93252   GCTAGCCCAGTCACA           GACACCTTT GATCA AAAGGTGTC           TTTTTTCTTTTTCGG 100 28
        sigW NONE
        rsiW  189328 ..  189354 +  -8.8  -5.41143   AATCCGAACGGAGAA         GAGTAAAGCG CGTTAGC CGCTTTGCTC         TTTTTTTGCGGGCTG 100 20
        cdaA NONE
        cdaR NONE
HCN55_RS01095  193241 ..  193253 +  -3.4  -4.26938   CACATGTTGTAAAAT                CAAG CTTGT CTTG                TTCTTATTTTCTCAA  59 142
        glmS  195370 ..  195401 +   -11  -4.96848   GAGTAATAAATGTTT      AACCCCTTTGGATA AGAT TATCTAAAGGGGTG       TTTTTATGTCCAAAA 100 35
HCN55_RS01105  196027 ..  196043 +  -2.2  -3.82923   ACATAATTGGCTGTC              CAAGGA CCGAT TCCTCG              TATTTTAATTAAGTT  51 505
        adaA NONE
HCN55_RS01120  198516 ..  198573 +  -8.1  -3.86307   TTAGTTGAAGTGAAG CCGACAATTTTCAGGATTCAATGATCTA ACA TA-ATCATTGAAATTTTGAAGTTGTCGG CTTTTTTGTTGGAAA  77 370
HCN55_RS01125 NONE
HCN55_RS01130  202858 ..  202869 +    -3  -3.18264   AATCTAAGCATTTAT                CAAA TGGA TTTG                 TTACTCAATACAAAA  45 46
HCN55_RS01135 NONE
HCN55_RS01140 NONE
HCN55_RS01145  204407 ..  204431 +  -7.2  -5.51402   TGTCGAAAGATCTAA          CATCCGCT GTTGTTATG AGCGGATG          TTTTTTTACATCTAT 100 205
HCN55_RS01150  205016 ..  205035 +    -8  -4.58395   ACAGAGATATAAAAA            TAAACATC AAAA GATGTTTA             TTTTTACACCATACA  84 29
HCN55_RS01155  206328 ..  206352 + -10.7  -5.78622   TTTCGAAAGTTCTAA          CATCCGCTCGT TAT ACAAGCGGGTG          TTTTTTTTAGCGTAG 100 41
        skfA  207400 ..  207432 +    -5  -4.66537   TTTAACATTTGAGAA     TAGGGAGT-TGAGCG TATT TGCTTATACTCCTTA      TTTTCTCTTAAGGGG  71 36
        skfB  208678 ..  208689 +    -3  -2.73334   AAGTCAAGGCAGGGA                TTCA GGAA TGAA                 TAGTCTATCATTGGT  41 15
        skfC  210165 ..  210188 +  -3.2  -2.85574   ATCAGCCAAAGCATA          CTTCACTCTAA TGA TTAG-GAGAAG          ATTTGATGCAATTGA  44 15
        skfE  211164 ..  211178 +  -4.2  -3.91164   GATATTATATGGCTT               TATGGC ACT GCCACA               TCTTTTTCAAAAGTT  59 276
        skfG NONE
        skfH  213366 ..  213385 +  -7.9  -5.15634   TTATGATGAAACGGT            CCTTCCT ATAAGC AGGAAGG             TTTTTTAATGAAATA  93 78
HCN55_RS01200 NONE
        ybdJ NONE
        ybdK NONE
HCN55_RS01215  216778 ..  216797 +  -7.2  -3.24902   CAAGGCCGAAATCGA            TGA-GGCAG AGC CTGCCATCA            TTGATGATGATATTA  62 288
HCN55_RS01230  219531 ..  219555 +  -9.4    -5.252   GTGTGAATTATTAGG          TAAGCTGTTC ATGTA GGACAGCTTA          TTTTTTATGAGAATC 100 27
HCN55_RS01235  221246 ..  221265 +  -7.2  -6.20267   AATAACGATAAAAAA            GAGACATT CACG GATGTCTC             TTTTTTTATTTTTCG 100 36
        csgA NONE
HCN55_RS01245  221803 ..  221823 + -16.9  -4.89521   TGAGCATGAGATTTA            GAGCCCTGC CGT GCAGGGCTC            TTTTATTTAGGATGT 100 25
        cypC  224068 ..  224092 + -10.1   -4.9445   AAGTTAAATTAAAAA          GCTCTCTTC CTTTATC GAAGAGAGC          TTTTTGATTACTTCT 100 34
HCN55_RS01265  226263 ..  226284 + -10.9  -5.48054   AAATATAGAAGAAAA           CCTTGCGAT AGTT GTCGCAAGG            TTTTTTGCTTTTAAT 100 40
HCN55_RS01280  229177 ..  229224 + -18.9  -3.03124   TCACTTTCTAACATA TCGTTGACTAAAGCAACTATA TGTGAT TATAATTGCTTTAGTCAACGA TATTAGAAAGTGGGA 100 48
HCN55_RS01285  230154 ..  230172 +    -3  -2.61912   ACGGTGGGATTTGGA             GCTGTCAT GAA AAGACTGC             ATTATGCGTGGATCA  41 16
HCN55_RS01290  231427 ..  231458 +  -7.4   -5.9667   GAGGACAAAGGGAAA      GCATCTCTGATT TCGAGATT ATTCAGAGATGC       TTTTTTTGTATTTTT 100 42
        purT  238336 ..  238361 + -14.1  -6.02919   AAAATAGAGTTTGAA         CAGGTCTTGTC ATGG GACAAGGCCTG          TTTTTTTCTTTCTCC 100 34
HCN55_RS01320 NONE
HCN55_RS01325  239772 ..  239801 +  -7.9  -5.80003   TAGTCTTCAAAGAAT       AGCAGTTTCCTTG ATTT TAAGGGAACTGCC        TTTTTTATTTATTGC 100 24
        cesB  240897 ..  240922 +    -4  -3.21438   ATAATAATAGAATTT         GAATGCTGCT TTTTTT GGGAGCATTC          TATGTTATCATGCTT  48 93
        pssA NONE
HCN55_RS01340 NONE
HCN55_RS01345  242825 ..  242851 +  -4.4  -5.40072   TACGAAGAATAAAAA        GAGGAGCTTGC ATAAAC GCA-GCGCCTC         TTTTTTTGAAGAAAG  81 29
HCN55_RS01350  243156 ..  243175 +  -7.2  -6.09888   GAGAATCCAGCTAAA            GCTTCTTT CAAC AGAGAAGC             TTTTTTTTGTTGGCA 100 27
HCN55_RS01355  244607 ..  244627 + -11.2  -4.70659   ATCAAGTGAGCGGTG            TCCCCTGT GGTAA ACAGGGGA            TTTTTACATATCGCA  95 32
HCN55_RS01360  245593 ..  245609 +  -2.3  -3.42775   GAGGAACTACAAAAA              TAGTTTT CAG ACAACTA              CTTTTATTAGTGAGT  45 23
HCN55_RS01365  246769 ..  246791 + -12.8  -5.76633   TGCTGAATAAAAAAA           GAACACCTCG TAT TGAGGTGTTC           TTTTTTTCTATATGC 100 31
        gamR  251757 ..  251813 +  -5.3  -4.27026   GAACGAAATTCACCG TAGAACAGTCATATCATTCATAAAGCA ATG TGTTTTAAGAAGGGAATGGTGGTTCTA TGTTTTTATTTACGA  67 3
HCN55_RS01390  252095 ..  252115 +  -8.3  -5.04868   GCGCTCTAAATCAAA            CAGCCAG AATAAAA CTGGCTG            TTTTCTTTAATTTCA  95 32
HCN55_RS01395  253379 ..  253400 + -14.5  -5.48213   GTGAAAATCGAAAAA           GAACCTGCC CGGA GGCAGGTTC            TTTTTATTTTGAATG 100 37
HCN55_RS01410  255979 ..  256007 +  -7.4  -4.83722   AACGCAAAAAGAGAA        AGGTGTTCAGCC CATAT GTCTGAACACCC        TTTTCTTATGATATT  83 3
        glnK NONE
        glnL  260951 ..  260969 +  -6.7  -5.52384   AGGATATAAACCAAA            CAGCC-GG CTGA CCAGGCTG             TTTTTTTGCTGCGCA  93 32
        kdgD NONE
HCN55_RS01440  263599 ..  263626 + -10.6  -2.91276   GAAGCCGTAATGGTG        CTGGAAAGAGGC GTGC GTCTCTTTCCCG         GTTTATCACAACCAG  77 31
        gudP NONE
        gudD  266437 ..  266449 +  -2.7   -4.0127   CGGAAGCGCCCGTGT                CTTGT GCG ATAAG                TTTGATTGTAAATAT  55 14
HCN55_RS01455  267230 ..  267255 +    -4  -5.40474   AATAATGGTGAGCAA         CCGCAGTT GAAACGTAAG AGCTGCGG          TTTTTTTAAACCAAT  78 36
        garD  269037 ..  269053 +  -3.6  -5.31456   GGTTATCAAAAAAGA              GGGTGG CGTGC CTGCCC              TTTTTTGTGCCTTCA  78 220
        mphK  270330 ..  270355 + -12.6  -5.61913   GGTGGTACCGCGAGA         CCCTCGTCCT TTGCAT AGGACGGGGG          TTTTTTGTGTTTCTT 100 316
        rtpA NONE
HCN55_RS01475  271573 ..  271614 +  -5.3  -5.50313   ATAATTTTTATAAAA CACACACGTT-TTTCAATTA CAA TAAGTGTAATTACGTGTGTG TTTTTTGATTTTGTA  88 37
        ycbL NONE
        ycbM  273276 ..  273294 +  -2.4  -3.55444   CGCATGACATATTAA             TCGTAAGA ATT TCTTAAGG             TTTGAGAAATAAAAA  47 26
HCN55_RS01490 NONE
HCN55_RS01495  275021 ..  275043 + -13.4  -3.81339   CCAATATGTATAAAA           GGCCGATGCT GTC AGCACCGGCC           TTTCCATTATGAGTC 100 51
HCN55_RS01510  276187 ..  276207 + -14.1  -5.27335   ATTTTAGAGACAGGA            CACCGTTCA AAT TGAACGGTG            TTTTTCTTTGAAAAG 100 34
HCN55_RS01515  277027 ..  277056 +  -9.4  -5.86609   ATAACTGATAAAGAG       CACTGAGTCATT CTGCGA AATGGCTCGGTG        TTTTTGTTTTTTTAA 100 37
HCN55_RS01520 NONE
        phoD NONE
       tatAD  279277 ..  279299 + -13.5  -5.60993   GGGCTGAATGCTGAT           GAGGCAGAC ACCGG GTCTGCCTC           TTTTTTTATGAAAGG 100 34
        tatC  280110 ..  280163 + -11.8  -4.51847   ATTGTGCGGCCGTAA CAGCGGCGATTCTCAATGCCCGGACA ATCG TGTCCAGGC-T-GAGGCTCGGCGCTG TTTTGTCGATTGTTT 100 78
HCN55_RS01545  281903 ..  281925 + -10.6  -4.44797   AGTAAACATGAAAAA           GCCCCTGA ACACTAG TCAGGGGC           TTTTCATATTAATGA  95 36
HCN55_RS01560  285330 ..  285347 +    -7  -5.91981   GAGTATTGAAGAAAA             GAAGGC GAATAA GCCTTC              TTTTTTTTGGCTTTT 100 32
        lipA  286137 ..  286161 + -14.5  -3.93216   TAATGAAAAACAAAA          CCTTGAAGAAT GCT ATTCTTCAAGG          TTATTCTGCTTTCAG 100 38
HCN55_RS01575  287866 ..  287890 + -15.9  -5.68023   TCATAATGGAAAAAA          CCTTGAAAAGC CAG GCTTTTCAAGG          TTTTTTTAATTCTGA 100 35
        natA NONE
        natB  291622 ..  291640 +  -7.5  -5.05601   AATAAACTTGCGAAA             GGAGAAA TACAC TTTCTCC             TTTTTGTATATCCTG  89 36
HCN55_RS01600  292679 ..  292713 + -13.8  -3.05275   CGACATTTTCAAATA     AAAAAGGAAATAGCCG TCA TGGCTATTTCCTTTTG     GTGTTTTATTCTTTG 100 25
HCN55_RS01615  295627 ..  295657 + -14.2  -5.00895   ACAATAATAGAAAAG       GACCTTTCTTCACT TTA AATGAAGAAAGGTC       TTTTTATATAATAAA 100 123
HCN55_RS01620  297232 ..  297243 +  -4.4  -3.83561   TTCCATATCCCATAT                GATG CTGC CATC                 CTTTTTTTGAAGGGC  58 180
        rapJ  298839 ..  298861 + -12.8  -5.70829   TTTCAATAGGAAATG           GCAGAGAACT ACA GGTTCTCTGC           TTTTTTTGTGCTGTT 100 32
HCN55_RS01635 NONE
HCN55_RS01640  301438 ..  301456 +  -8.8  -5.53991   TAATGATTGAAGTAG             CCCGGC ATTTTTA GCCGGG             TTTTTTTAGTACATA 100 38
HCN55_RS01645  302575 ..  302601 + -13.1  -4.55295   GGTTAAATCATAAGA         TAGTGTGCGCC GGAGG GGTGCACACTA         TTTCTTTGTGAGAAA 100 28
        znuC NONE
        znuB  304132 ..  304155 +   -14  -5.60993   CCGATAACATGAAAA          GCAGTTTTCC CTAG GGAAAACTGC           TTTTTTTATAGAAAC 100 34
HCN55_RS01665 NONE
HCN55_RS01670 NONE
HCN55_RS01675 NONE
HCN55_RS01680  308090 ..  308112 +  -4.8   -5.4505   AATAAAACAAAACAA           GGAGGGAGGT TCA ATGTCCTTCC           TTTTTTGTTACCGAA  88 36
HCN55_RS01685 NONE
HCN55_RS01690  310889 ..  310917 + -13.9  -3.77219   TGCAGCAATAATAAA        AACCCCGCTTGTG GAA CATAAGCGGGGTA        TTTCAATTACATCAT 100 30
        niaP  312437 ..  312456 +  -9.3  -5.09426   TGTCAACAATCTGAG            GCACCTC TTGAAT GAGGTGC             TTTTTTACAATTGCG 100 254
HCN55_RS01710 NONE
HCN55_RS01715  316395 ..  316426 +  -3.1  -2.73441   AAAAGCAGGGGGAAT      GCCTGATGCTTA AAAAAATCA TAGGCATC-GGC      GTTTCCGCCATGCTG  43 20
       opuAC  317290 ..  317308 + -14.6  -5.53288   GAAGTAATCAAAAAA             GCAGCCTG TGT CAGGCTGC             TTTTTTTGCGTTAAG 100 34
HCN55_RS01730  320061 ..  320083 + -13.4  -4.36729   GTTTTAACGATTGCT           GCCCGCCG GCTTGTA CGGCGGGC           TTTTGAGTTATTCAT 100 34
HCN55_RS01735  320728 ..  320757 +  -6.5  -3.52111   AACATTGATTTGTAT       TCACTCTGCCAAG TTGT TTTGATAGAGTGA        TTGTGATAATTTTAA  64 4
        amyE  322906 ..  322926 + -12.7   -5.5112   CGGGACTTACCGAAA            GAAACCATC AAT GATGGTTTC            TTTTTTGTTCATAAA 100 54
HCN55_RS01745 NONE
HCN55_RS01750  325686 ..  325710 + -17.3  -5.82172   GTGTAATAGAAAAAA          GCAGTACATGC CCA GCATGTACTGC          TTTTTTTATGTTAAT 100 35
HCN55_RS01760 NONE
HCN55_RS01765 NONE
HCN55_RS01770  329382 ..  329405 +  -5.2  -5.53991   ATAAATCAAGGACTG          GCAGGGCGAT CTTT ATGACCCTGC           TTTTTTTGATAGATC  88 37
HCN55_RS01780  331424 ..  331435 +  -2.2  -2.78504   GTGACATCCATACGG                GTTG AAGT CAGC                 TGATCTCTCTTGTTC  41 11
        nadE  332397 ..  332415 +   -16  -4.50976   AATAAGTTGAAGAAA             GCCCGCTC TCG GAGCGGGC             TTTTGTCGTGTACAG 100 36
HCN55_RS01795  333858 ..  333898 + -22.1  -4.49939   GGGATCTTTATCAGC  CGATGTAAAAAGCCGTGCG CAG CGCACGGCTTTTTTTATCG  TTTTATCCCTTGTAT 100 18
HCN55_RS01805 NONE
HCN55_RS01810  336788 ..  336808 +  -5.3  -5.60993   GATAAATGTGAAAAG            CCGCCGCAT ATC ATCAGGCGG            TTTTTTTCTGCAAAC  88 39
HCN55_RS01815  337632 ..  337657 +  -2.6  -4.67256   GTGTGGAAGGATGGA         GGAAGCTGATG TTTTT TGTC-GCTTCC         TTTTCTCCTTTATTC  62 17
HCN55_RS01820 NONE
        pruA  340318 ..  340344 +  -8.7   -3.7829   CTAAGCGGGACTAAA         TGGGCATCCTC CCTGC GGGGGTGTCCA         TTTCATCCATATACT  78 37
        putP  341857 ..  341895 + -16.2  -3.08032   GTCGCAATAAAGATC   GAAAGGAGGAGGAAGGGG CTG TCCCTTTTTCCTCTTTTC   TCCTTTTAAGCGGCC 100 31
        putR  343248 ..  343263 +  -7.6  -3.94853   GAAATAAAAAAGAAA              CCAGTA CTTG TACTGG               TTTCGTCTTCACTTA  74 34
        ffoR  347491 ..  347504 +  -6.7  -4.14739   AAAACGAACAGGATT               CATGC TTTT GCATG                TTTTCCACTGCATGG  70 368
HCN55_RS01885  357433 ..  357452 +   -10   -5.8901   TTTAGGATTTTGACG            GACACGCG TTTG TGCGTGTC             TTTTTTATTTTCTCT 100 36
HCN55_RS01890 NONE
HCN55_RS01895  359081 ..  359093 +  -6.3   -4.4767   CCATACAATTTAAAT                CGTAA CAA TTACG                TTTTATGATAAATGG  73 72
HCN55_RS01900 NONE
        zinU  360544 ..  360563 +   -10  -5.52384   ATCAATAGAAAAAAA            GCCG-TCCC ATG GGGAACGGC            TTTTTTTAATGAAAC 100 33
HCN55_RS01920 NONE
HCN55_RS01925  362956 ..  362987 + -11.8  -4.87665   TGCTGACGAAGAGAT      TAGAAAGAGCGAAT AATG GTTCGCTCTTTTTA       TTTTTATGCATAAAA 100 10
HCN55_RS01930  363394 ..  363415 +  -9.5  -4.39407   ACATTAAGATTTTAA           GCATCCAAT GGGA ATTGGGTGC            TTTTGCGTTATTTAC  91 34
        bglC  364977 ..  365001 + -12.2   -4.8622   AAAGTTTATAAAGAG          TCCCTGAGAG TTATT CTCTCAGGGG          TTTTTCATTACACAG 100 30
        hxlR  369674 ..  369694 +  -8.3  -5.63857   AAAGAATCGTTGTAA            GACGCTCTT CGC AAGGGTGTC            TTTTTTTGCCTTTTT 100 26
       srfAA NONE
       srfAB NONE
       srfAC NONE
       srfAD  396402 ..  396424 +  -9.9  -5.80817   CAACCGTGATCAAAA          GCGG-ACAGC TTCG GCTGTTCCGC           TTTTTTTGTGTTGAA 100 32
HCN55_RS01990  397725 ..  397749 + -11.5  -4.81851   CCATTCAATATAAAA          GGATCAGCACT GTC AATGCTGATCC          TTTTTAAATTTGAGT 100 28
HCN55_RS02005  401178 ..  401196 +  -4.4  -3.15996   AGCGTCGGGAAGATC             AGGGATGC ACG GCTTCCCG             TATTCCTGCGTGCTA  51 459
HCN55_RS02040  406429 ..  406448 +  -3.6  -2.73635   AACAAAAAGGAGGAG            CTTGATCA TGGC TTATCAAG             ATTTCAGAGAATTTC  45 21
HCN55_RS02045 NONE
        bsdD NONE
HCN55_RS02055  408571 ..  408591 + -16.9  -5.74122   ACGGTAATATCGATA            GCCTGACGC CAT GCGTCAGGC            TTTTTTTATATAATG 100 34
HCN55_RS02060  409479 ..  409506 + -15.6   -4.1021   TTGATCAATAAAAAA        CAGCCCGCAGAT CAAC ATCCGCGGGCTG         TTTCTGATTATAAGA 100 30
HCN55_RS02070  413033 ..  413052 +  -2.7  -5.89947   GATTGTCTGAAAAAA            GCGCCCC CCTTTA GGGGTTC             TTTTTTTTCGATTTA  85 31
       gerKA NONE
       gerKC NONE
       gerKB  417390 ..  417414 +  -8.5   -5.1167   AAAAAATGATAAAAA          GAGCGGGGG GATGCGG CCGCCGCTC          TTTTTATGTTCACTT 100 32
        yclJ NONE
        yclK  421956 ..  421982 +  -8.7  -5.00616   AGCAATAGCATACAG        GGCGG-CGCATC AACT GATGCATCCGCC         TTTTTTGCACACCGC 100 33
        rapC NONE
        phrC  423373 ..  423396 + -12.5  -5.45802   TGACGTAAGAACAAG          CCCCTTCTC ATTAGC GAGAAGGGG           TTTTTCTTTTCAAAA 100 33
        yclN NONE
        yclO NONE
        yclP NONE
        yclQ  429279 ..  429303 + -12.2  -5.84381   AAGTAAAACCAAAAA         GAGCCTCCGCT AAAT AGCGG-GGCTC          TTTTTTTGTTAATCA 100 35
HCN55_RS02180  433309 ..  433324 +  -6.1  -5.72616   CCGCTGGTGAATCAA              TCCCC TGTAAC GGGGA               TTTTTTTATGTCCGT  91 31
        gabT  436137 ..  436156 +  -4.2  -2.56164   TGAAGGGCTCAGCAT            CTTGGAGG CGGG CCTGCGAG             CTTAATCATTGGAAA  47 1
HCN55_RS02195  437637 ..  437661 + -20.1   -5.0916   AATGCACGCTCCTGA          GAGCTGCCGGA TTT TCCGGCAGCTC          TTTTTGTGTTCCGGC 100 44
        glcU NONE
HCN55_RS02205  439419 ..  439445 +    -8  -4.67607   GGTTAAACATAAAAA         GCGACCCAGA CATGACA TCTGGATCGC         TTTCTTTATTAGGCA  84 35
HCN55_RS02225  442823 ..  442842 + -13.6  -5.61881   AGAGGAAAGAGAAAA            GGCTCCTG AAAC CAGGAGCC             TTTTTATTTTTAAAA 100 17
HCN55_RS02230 NONE
HCN55_RS02235 NONE
HCN55_RS02240  446026 ..  446048 +   -12  -5.60864   AATCAATAACCGACC           ACCCGTGACA CAA TGTCACGGGC           TTTTTTTACTATCTC 100 32
HCN55_RS02245  447175 ..  447214 + -13.7  -3.90291   TTAAGAAAGCTCTGA TGAATCAGGCCGGTGGCAG ATGG CTGCC-CCGGCCTG-TCCA  TTTCCTTACGAAAAT 100 26
        lepB  447952 ..  447977 +  -8.2  -5.31275   AAAATGATGATGAAA         CGGTGCGGAG CCGGCT TTCCGCCCCG          TTTTTTATGATAGAA 100 105
HCN55_RS02260  449025 ..  449048 + -11.8  -4.05861   GAAAAATGAAAAAAA          CCCTTCACAA CATT TTGTGAGGGG           TTCTATTTTGTGTCG  91 32
HCN55_RS02270  450103 ..  450124 + -10.2  -5.37593   GGTACTATAAAAAAA           GAGAGTCC TAAGAT GGACTCTC            TTTTTTAGTTTGGCA 100 31
        pxpA NONE
HCN55_RS02280 NONE
HCN55_RS02285 NONE
        pxpB NONE
HCN55_RS02295 NONE
HCN55_RS02300 NONE
        lipC  456348 ..  456385 +   -18  -2.79679   AAGAATTATCAGTTT   CATAGAAAACGCGCCT CATGAC AGGCGCGTTTTTTATG    TGTGATCGAAATATT 100 21
HCN55_RS02310 NONE
HCN55_RS02320 NONE
HCN55_RS02325  460228 ..  460249 +  -9.5  -4.76312   GATATTCCATAAAAA           GCATCAGTT TACC AGCTGATGC            TTTTTCAATATTGTC 100 29
        mtlR  462505 ..  462528 + -11.8  -4.99035   TGTAAACCTGCATGG          CACACGTCAA AAAT TTGGCGTGTG           TTTTTCTGTGGATGG 100 36
HCN55_RS02335  464223 ..  464252 + -14.4  -3.66178   ACATTCATAAAAGAA       GAAGCCCGTCCAC TTTAT GTGG-CGGGCTTC       TTTGCAGTTGCACAG 100 31
HCN55_RS02345 NONE
        lyxE  466369 ..  466390 + -14.5   -5.0916   GATCCAAGAATATAA           GGATGGGCT TAAC AGCCCATCC            TTTTTGTATTGAAAA 100 26
HCN55_RS02355 NONE
HCN55_RS02360  467901 ..  467922 + -12.9   -5.7946   AAAGAATAAGACAAA           CCGCCCGGC GTAC GCCGGACGG            TTTTTTTATTGCAAA 100 421
         amj  468828 ..  468850 + -13.5  -4.68506   GGTTTTAATAAGAAA           GGCTGGATC ATAAA GATCCAGCC           TTTTTGCGCTTCCTT 100 33
        lrpC NONE
HCN55_RS02380  472030 ..  472048 + -10.3   -5.4756   TAAATAATAAAAAAA             CCTGTGC CTATC GCACAGG             TTTTTTATTGGACTT 100 34
HCN55_RS02385 NONE
        epsK NONE
HCN55_RS02395 NONE
HCN55_RS02400 NONE
HCN55_RS02405  479239 ..  479259 +  -9.7  -6.20267   AGATACAGAATAAAA            CAGAGGCGA TTT TAGCCTCTG            TTTTTTTATTTTTGG 100 28
        kimA  481543 ..  481566 + -12.5  -4.56597   AAAAGTAAAGCTCTA          GGACCAAGG GAATCA CCTTGGTCC           TTTTTAGCGGGAAAA 100 33
        mutT  482056 ..  482067 +  -2.2   -4.0348   TGATTCAGGTCTCCG                GGTT TTAA AGCC                 TTTCTCCTGTGGTAT  53 38
HCN55_RS02420  483840 ..  483860 +  -8.9  -7.14698   GTTATTTTAAAAAAA            CAGGGGCCC TAA GAGCCCTTG            TTTTTTTTTTTTTTT 100 31
HCN55_RS02450  487664 ..  487689 +  -6.1  -5.52384   ATGGAATAGCAGAAA         GCAGACGGA CACCGCGA TCCGCCTGC          TTTTTTTAGTGGAAA  91 32
HCN55_RS02455  488195 ..  488220 + -12.6  -5.79526   CCTGTAAATAAAAAA         GCGATCCGGC ACATCA GCTGGATCGC          TTTTTTTTGGAATCT 100 63
HCN55_RS02460 NONE
HCN55_RS02465  488989 ..  489011 +   -15  -3.78419   GAAGGCATAATCAAA           GCCCAAAACA TCA TGTTTTGGGC           TTGTCTCTTTACTCG 100 31
        dctS NONE
        dctR NONE
HCN55_RS02490  494720 ..  494737 + -12.7  -5.73672   AGTCTGAAAAAAGAA             CGGCCCA TCCA TGGGCCG              TTTTTTTAATTGTTT 100 34
HCN55_RS02495  496130 ..  496159 + -10.1  -5.24129   ACAAATGCTATAATA       CAAACAGTGCCTA ATGT TGGGCACTGTTTA        TTTTTTGTCGAAAAA 100 244
HCN55_RS02500 NONE
HCN55_RS02505  497918 ..  497929 +    -3  -4.63479   GCTCACGTAAATCAA                TATC ATTT GATA                 TTTTGGTTTATACTA  62 69
HCN55_RS02510  498306 ..  498332 + -16.6  -5.00895   CAAATCCTGTGTAAT         CGCGCTGTTCCC TTG GGGAACGGCGTG         TTTTTCTATACTGGG 100 27
HCN55_RS02515  499584 ..  499598 +  -7.1   -5.1383   GAGTCATAAAAAAAA               GAGCC TTACC GGCTC               TTTTTATGTATTGTT  90 32
HCN55_RS02530  501137 ..  501148 +  -5.8  -3.50466   TGAAAATAAGCAGGC                TGGG AATG CCCA                 TTACTTGGTATTTTT  57 144
HCN55_RS02540  502603 ..  502624 +  -7.3  -5.08169   TCTAATGAAGAAGGA           CACTGCC GGTAAAAG GGCAGTG            TTTTTTCCCGTATAT  90 36
HCN55_RS02545  504240 ..  504279 +  -8.6  -2.63073   TCTTGGGAGCGGATG  GAGCAGCAG-CCGGCATAT TCG AGATGCCGATCTGCTTCTC  ATCTTATTGAAAAAC  68 228
        cshA  505937 ..  505959 +   -15  -5.49569   TTTGATCGATTCAGA           GCCCAAAACA TGA TGTTTTGGGC           TTTTTTATGTTCGTG 100 41
HCN55_RS02555 NONE
HCN55_RS02560  508236 ..  508280 +   -19  -2.87132   CAATCACGCTGAAAA GATGACAAAATCCTAAAATG AAAAC CATTTTAGGATTTTGTCAAC TATCTGAAGCGGCGG 100 217
        acpS NONE
HCN55_RS02575  510546 ..  510564 +  -8.9  -5.63103   GAAATAACCGCCAAA             GGCCAAA CATGA TTTGGCC             TTTTTTTCGTTAGAC 100 34
         alr NONE
        endB NONE
        ndoA  512586 ..  512604 +  -8.9  -6.09196   TAGACATATTTGCAG             GTTGCTC AAATA GAGCAAC             TTTTTTTGTTTTCAA 100 38
       rsbRA NONE
        rsbS NONE
        rsbT  514267 ..  514279 +  -7.7  -3.05816   GGAACAGAGATACAA                GCCAT CAA ATGGC                TTCGGTAGGAGGTAA  65 5
        rsbU NONE
HCN55_RS02615 NONE
        rsbW NONE
        sigB NONE
        rsbX  517543 ..  517562 +   -10  -5.81032   AAAAAACCAGAAAAA            GAAGCTGG ACAT CCGGCTTC             TTTTTTTTGCGGTTG 100 39
HCN55_RS02635 NONE
HCN55_RS02640 NONE
HCN55_RS02645 NONE
HCN55_RS02650  518937 ..  518952 +  -6.8  -5.82281   ATGAGTAAAGATACG              GGCAGC GCCA GCTGTC               TTTTTTTATGTGTTT  93 33
HCN55_RS02655  521186 ..  521203 +  -9.9  -5.21709   ATGGTAAAATAAAAG             CACTGCT TACG AGCAGTG              TTTTTTCCTATAGAA 100 29
HCN55_RS02665  521952 ..  521974 +  -5.6  -3.01745   CTTGACACTGCAAAT           CAAGGCTGAT ATA ATAAGTCTTG           TCTCATTATTCCACA  53 116
HCN55_RS02670 NONE
HCN55_RS02675  522128 ..  522140 +  -3.3   -2.8294   GCGTAAGCGGCGCGA                GGGTT CAA ATCCC                TCCTTCTCCGCCATA  44 0
HCN55_RS02680 NONE
HCN55_RS02685 NONE
HCN55_RS02690 NONE
HCN55_RS02695 NONE
HCN55_RS02700  522707 ..  522732 +   -12  -5.90231   CGGCCGCATCAATGA         TACCAAGGGT TTTGAC ACCCTTGGTA          TTTTTTTGTGTTTAT 100 33
         xis NONE
HCN55_RS02725 NONE
HCN55_RS02730  526026 ..  526037 +  -5.8  -3.21126   TAAGCGTGCGGAATA                GCTG TAGT CAGC                 TTGATGGCTATAATT  58 219
HCN55_RS02735 NONE
        helP NONE
        conQ NONE
        nicK  529317 ..  529334 +    -7  -2.66272   TAGATTAACAGCAAT             CCAACG AGCTAC CGTTGG              TGGGTTTGGGTGAAA  60 231
HCN55_RS02755  529643 ..  529660 +  -4.2  -2.64155   ATGCATTTTACGGAG             TAAGGA CAATTT TCCTTA              TGACTTTAAAGGGGG  47 23
HCN55_RS02760 NONE
HCN55_RS02765 NONE
HCN55_RS02770 NONE
HCN55_RS02775 NONE
HCN55_RS02780 NONE
        conE NONE
HCN55_RS02790 NONE
HCN55_RS02795 NONE
HCN55_RS02800 NONE
HCN55_RS02805  538838 ..  538848 +  -2.6  -3.01712   AGATCAATTTGTTTG                 TTTA TAC TAAA                 TATTGAAAAAGGAGG  43 51
HCN55_RS02810  539247 ..  539273 + -13.9  -4.78029   GAAGAGACAGAGTTA         GAGGAGTAAAC CGTGT GTTTACTCCTC         TTTTAGTTTTATTGA 100 17
        rapI NONE
        phrI  541865 ..  541890 +  -7.7  -5.67711   GAAAAGAGGAAAAAA         GCTTAATCTTT TTTC GAAGGTTAAGC          TTTTTCTTTTATTTA 100 53
HCN55_RS02830  543217 ..  543248 + -11.1  -5.71712   TCGGCCGCATCTCAA      TAATACCAAGGGT TTAACC ACCTTTGGTATTA       TTTTTTTGTGTGGAA 100 311
        lrpA  545269 ..  545306 +  -2.7  -4.93318   TATATGCTCTAAAAA   AGCCCTAGGTTGG-ATAT GGA ATTTACCAAGCTGGGGCC   TTTTTATACATTATA  68 83
HCN55_RS02850  546507 ..  546536 + -11.6  -4.39107   CAACAACTTAAAAAA       GGATGTTCAGAA AAATAC TTCTGGACATCC        TTTATTCATTATCTT  95 92
HCN55_RS02855  547783 ..  547817 +  -8.8  -3.44527   GACAAATAAATAGAA     GAAGCTCATAATTA TAAAAAC TAATCATGAGCTTC     TTCTAATAATGAATA  73 51
HCN55_RS02860  549414 ..  549431 +  -2.7  -4.95547   ATGTAATGAACGGAA             GAGATAA TTAT TTATCAC              TTTTATTATTGTACG  68 178
HCN55_RS02865 NONE
HCN55_RS02870  550740 ..  550768 + -14.1  -5.55769   TAGCTAATTTTAAAA        TCACTTTGTCTTT ATA AAGGACAAAGTGA        TTTTTTGTTATACAG 100 34
HCN55_RS02875  551361 ..  551388 +   -10  -4.51994   CATAAAGTTGGGAAA        GAAGGATGTTAC TTAT GTAGTATCCTTC         TTTATTATTCCTTGA  91 45
HCN55_RS02880 NONE
        cspC  552768 ..  552789 +    -8  -5.77988   AATCGTTTATACAAA           CAGGCTCT TTATAT AGGGCCTG            TTTTTTTATGTCTAT 100 46
HCN55_RS02905  556823 ..  556848 +  -5.4   -5.4505   CGGCAGTATCAAAAA         TACCAAGGGT TTTGAC GCCCTAGGTA          TTTTTTCTTCAAGAA  88 104
HCN55_RS02915  559393 ..  559418 + -10.6  -5.30686   TACCTAATATTGTTT         GCCATACAAT TATGAC ATTGTATGGC          TTTTTTGTGCGTGTT 100 34
HCN55_RS02920  560800 ..  560813 +  -2.5  -4.51763   AAAGGGTAGGATTGT               TTAAT TTAC ATTAA                TTTGTTATATTGTTA  60 39
HCN55_RS02925  561444 ..  561461 +  -7.7  -5.95946   AATTATACAAAAAGA             GAAGGCT TGTG GGCCTTC              TTTTTTTGTTGTTGC 100 78
HCN55_RS02930  562289 ..  562308 +  -6.5   -5.4505   TCTATAGAAGAAAAA            CAAGCAT AGTAAG ATGCTTG             TTTTTTCTTAGGACA  93 93
HCN55_RS02945  566169 ..  566188 +  -5.1  -3.99436   CCAGGCCACGATACG            TCTGTTT AGCGAA AAACAGA             ATTTTTTATTTGCTC  61 131
HCN55_RS02950  566691 ..  566707 + -10.8  -2.52543   ACGATAACTCAGAAA              GCCCGC TTTTC GCGGGC              TCGATTGAAGCAGAT  77 34
HCN55_RS02965  568956 ..  568981 +  -9.1   -5.4111   TCTGAATCACAGAAA         TACCAAGGG CGTCAAAA CCCTTGGTA          TTTTTTCTGGTTATT 100 136
HCN55_RS02975  570222 ..  570235 +  -3.9  -2.94747   CTGCTTATTTTTGGT               GAAAT ACTT ATTTC                TCTGTGATGAAATAA  47 162
HCN55_RS02985  572517 ..  572536 +  -7.8  -5.21709   TACTTGCAATGTAAA            CAGGCCTC TAAA GAGACCTG             TTTTTTAATATCCAG  93 326
        aseR NONE
HCN55_RS02995  574838 ..  574868 + -13.4  -5.77734   CAATGTGTTGTTCAA       CAGGTGTCTGCG AGCTGAG TGCAGACACCTG       TTTTTGTTTTTATTT 100 384
HCN55_RS03005  575788 ..  575809 + -11.7  -5.79595   AGAACCTTAAAAGGA           GATACCAAC CGAT GTTGGTATC            TTTTTTGTTTTAGAG 100 51
HCN55_RS03015  578618 ..  578649 +   -11  -3.65199   TGACGATTCATATTC      TGGAAGCCGAATGTG TTT CAC-TTCGGCTTCGA      TTTGGATAGGGCATT  83 323
HCN55_RS03025  579874 ..  579907 + -13.4  -4.20868   GAGGCACGATATCTA     GGAGGAGTAAGATT TGTTCT AATCTTACTCCTTC      TTCTTATTTTGAAGC 100 68
        ydfH NONE
        ydfI  582910 ..  582929 +  -6.5  -5.73563   TGAAAATTGCCCAAA            CGTACAT GCCCGA ATGTACG             TTTTTTTCATTTCAT  93 51
HCN55_RS03055  585494 ..  585516 +  -9.2   -5.0538   TTTGTCCAAGAAAAA           TAGAGTCCAT AAG AGGGACTCTA           TTTTTTGAAGTGCCC 100 345
HCN55_RS03080 NONE
HCN55_RS03085 NONE
HCN55_RS03090  591842 ..  591870 + -12.6  -5.10163   TACGAAAGTATGTAA        GAACAGTTGCTG CTTGT CAGTAACTGTTC        TTTTATTTTCACATT 100 41
HCN55_RS03095  592369 ..  592384 +  -7.6  -5.95946   AATAAGGCAAAAAAA              GAACTC AAAT GAGTTC               TTTTTTTATTCTTCA 100 44
HCN55_RS03120  595340 ..  595368 +  -3.9  -4.32857   TAAACAAACGTAGAA       GCTTCGGAATCA AAAAAA TG-TTCCGGGGC        TTTATATTTGAGCAC  64 356
HCN55_RS03140  596857 ..  596869 +  -3.4  -2.63913   TAATTTACGGGATGC                TTCC GAAAG GGAA                TGATGTAAGATGATA  43 0
HCN55_RS03145  597343 ..  597360 +  -6.9  -5.60993   ATTTCTGTGTTATTC             GTCCGGC ATCA GCTGGGC              TTTTTTTATAAAGGA 100 145
HCN55_RS03150  597974 ..  597991 +  -9.9  -4.18762   ACATATAAAGAAAAA             GGACAAC AGCT GTTGTCC              TTTTCAATGCCGCTT  86 140
HCN55_RS03170 NONE
HCN55_RS03175  605339 ..  605360 + -11.7   -5.1675   GAGTAATCGAGAGAA           GAGTGATGA ATGG TCATCACTC            TTTTTTCATGACTAA 100 35
HCN55_RS03190  608132 ..  608162 +  -9.9  -4.88918   TAGGGCAGAATTCAT       AAAAAAACCTGAC ATGAC GTCAGGTTTTTTG       TTTTATTTAGAATAA 100 24
HCN55_RS03200  609844 ..  609870 +  -8.1  -5.80248   ATTTGTATGATCCGG         TACCAAGGG AGAGCAGAA CCCTTGGTA         TTTTTTTATGTATTC 100 40
HCN55_RS03205  611224 ..  611243 +    -5  -5.95166   AAAAGTGTAAAAAAA            GACACC AGAGCTTG GGTGTC             TTTTTTTTGATTAAG  91 31
HCN55_RS03210  612573 ..  612599 + -19.6  -3.52918   AACAAATAAGAAAAA         GAACTCCCGTAC CTT GTACGGGAGTTC         TTGATTTAAAACTTG 100 32
HCN55_RS03225  615675 ..  615693 +  -3.8   -3.2614   CTTCAATCGTAATAT             CATGGCCT TCA AGCTCATG             TTCATCTAACCGCTC  48 198
HCN55_RS03240  617637 ..  617652 +  -7.5  -5.88197   CTTAAAGCAGTAATT              GCCGC CTGACA GCGGC               TTTTTTTATGTTTGG 100 28
HCN55_RS03245  618401 ..  618420 + -10.8  -5.66989   CTAAATAATAAAAAA            TCCTCCTT TTAC AAGGAGGA             TTTTTTTGCTGTTTG 100 33
HCN55_RS03255 NONE
HCN55_RS03260 NONE
        celB NONE
        gmuD NONE
        gmuR NONE
        gmuE  625083 ..  625101 +  -3.8  -2.53831   GGCAGCATCCGGGGA             GGTGCG ATCATGA CGCATC             CATTATTTTTAGAGC  45 13
        manA NONE
        gmuG  627163 ..  627202 + -10.8  -2.53911   TCCGTAATGTCACAA  TTAAGAAGGTGCTCAAGA AGTT TCTTGAGCACCTTCCCAC   TGGATTAAGCATTCA  77 42
HCN55_RS03300 NONE
HCN55_RS03305  628556 ..  628567 +    -3  -2.61144   TCTCATCACCCGCTC                CATT ATTG AATG                 ATCTTTGAAAACTAA  41 23
HCN55_RS03310  630334 ..  630359 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
HCN55_RS03315  633400 ..  633417 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 55
         rrf NONE
HCN55_RS03325 NONE
HCN55_RS03330  633827 ..  633846 +  -5.7  -4.62441   TTTACTGTATCTTCT            GCTTGGT GTCATA GCCAAGC             TTTCTTTATATCGGG  73 87
HCN55_RS03335 NONE
        tsaE NONE
        tsaB NONE
        rimI NONE
        tsaD  637569 ..  637593 +  -7.2   -5.1634   TGACTTCTTATCAAA          GTCTCACG AGATAATAG CGTGAGAC          TTTTTATCTGTTTGT  90 12
        moaC NONE
HCN55_RS03370 NONE
       tatAY NONE
        tatC  641996 ..  642019 + -12.6  -5.08483   GGCAATAATAAAAAA          TCCATTTCTC ATGC GAGAAATGGA           TTTTCTTTAATTTTG 100 33
HCN55_RS03395  643454 ..  643471 +  -6.3  -3.67597   CGTGAAAGCGACATT             TTAGCTG TTAT CGGCTAA              TTCTTAAATAAACAA  63 8
        groL  645231 ..  645265 +   -13   -4.4727   AATAAAAAAAGAGAA     GGTCTTTCATCAGTTT ACT AAACTGTTGGGAGACC     TTTTCTCCATATTAG 100 104
HCN55_RS03410 NONE
HCN55_RS03415  647645 ..  647657 +  -3.3  -4.09243   CATCATGGCGTGTAG                GAGTG ATT CACCC                TTTTAAGAAACTGTC  57 43
HCN55_RS03420  648444 ..  648455 +  -4.4  -3.51137   AGGTATAATGATAAA                GAAC ATTC GTTC                 TTGTATGGGGTACTT  55 493
         dcm NONE
HCN55_RS03430  651016 ..  651039 + -13.9   -5.5762   CATACTAAAAAGTAT          CGGAGCTGG ATAAAA CCAGCTCCG           TTTTTTATCTTTAAT 100 60
        ydiR NONE
       bsuRB NONE
HCN55_RS03450  656571 ..  656609 + -12.6  -5.24989   CATTTGCAAATTTTC   AAGGCTTCTCATGAGTTC ACC GAACTTGTGAGAAGCTTC   TTTTTTGATGTATAA 100 285
HCN55_RS03455  657340 ..  657356 +  -5.2  -3.43446   AAGTATTCTAGTTCT              GTTCTT GTTGG AAGAAC              TATTCTTAAGTATCC  55 145
        gutB  661819 ..  661840 +  -6.6  -3.59252   ATCGCTGAGTGAACA           GGGAGGAT CTTCGT ATTCTCCC            TCTTGTTTACTGGAA  64 33
HCN55_RS03475 NONE
HCN55_RS03480  664343 ..  664379 +  -2.4  -5.87996   TTGTAAATCATTGAA   GATGTTTCTTGAAAGTC TTTG GACTTTTGGGGG-CATC    TTTTTTTATTGCTTA  83 35
HCN55_RS03485  665220 ..  665246 + -14.4  -3.27674   ATAAGTAATACATAG         GAGGCCGCAGCT TTC GGCTGCGGCGTC         ATTTTATCATAAAAT 100 33
HCN55_RS03490 NONE
HCN55_RS03495 NONE
HCN55_RS03500  668087 ..  668111 +   -10  -5.63517   ATCATACAGTGAAAA          GTCCGGAGTG ATCAG CACTCGGGAC          TTTTTTATTTAGGAG 100 43
        iolT  671157 ..  671180 + -15.4  -4.99134   GGATAATTTAAAAAA          GAATCCGCAC CCGA GTGCGGATTC           TTTTTGGTTTCAAAT 100 35
        walM  673067 ..  673086 +  -6.5   -5.1244   TATATAATCTGGAAA            GCAAGAA GTCACA TTCTTGC             TTTTTCTATTGGTGG  86 47
HCN55_RS03525  674163 ..  674186 +  -8.8   -5.1675   GATTAACTAATAAAA          ACCACTCGGC ATGA GCTGAGTGGC           TTTTTTAATGGATGA 100 31
        mneS  681322 ..  681340 + -13.2  -5.53079   TGTCAACAATCTGGA             GCTTCCTG CCA CAGGAAGC             TTTTTTGTGTGTTTT 100 229
HCN55_RS03570 NONE
HCN55_RS03575  683602 ..  683618 +  -4.3  -3.90744   TCGGATCATGAGGGG              CGGGCGA GTT TCGCGTG              TTGTTTAGAAAGAGA  59 1
HCN55_RS03580  685949 ..  685978 +  -2.1  -4.04353   AACGGCCTTGCCAAA       GAGGGCGGA-GCGA GCT TCATATCTGTCCTC       GTTTTTTTCTGTGTC  53 113
        guaA  687583 ..  687614 + -12.4  -5.24515   ATCAATTAATGGAAA      CCATCTTTTTGGCA ATTT TGCCGGGAAGATGG       TTTTATTTGTTTATT 100 43
        pbuG  689280 ..  689299 + -13.6   -5.7946   ATAAGGAATGAAAAA            CCAGCTGC ACTG GCAGCTGG             TTTTTTTGTTGCAAA 100 37
HCN55_RS03595  690291 ..  690308 + -11.3  -5.71712   GCTTTAATGAAAAAA             CCGGCTA ATCC TAGCCGG              TTTTTTTATGTCACA 100 34
        fbpA  690629 ..  690646 +  -5.5  -5.85244   GATATAAAGAGGTGA             GTCTGCT GAAA AGCGGGC              TTTTTTGTTTTGATT  91 46
HCN55_RS03605 NONE
HCN55_RS03610  691805 ..  691850 +  -4.1  -5.86976   ACGATACATGTACCA TGCCCGGTTTGTATTGC TTCCTCATAAGT GCAATGCAGAGCGGGTA TTTTTTATTTTCTGA  90 257
        purE NONE
        purK NONE
        purB  694811 ..  694831 +  -3.9  -3.28712   TTTAGGTTTAGCATA            GAAGAAGCT TTT AGCGGCTTC            TTCTAAGCCGCCGCA  48 25
HCN55_RS03630 NONE
        purS NONE
        purQ NONE
        purL NONE
HCN55_RS03650  700176 ..  700195 +  -6.4  -4.40003   GAAAAATGACATAAA            GGCAGC GCAGTTCG GCTGCC             TTTCTCTTTCTGCCC  76 46
HCN55_RS03655 NONE
        purN NONE
        purH NONE
        purD  704711 ..  704729 + -11.7  -5.55769   AATAAGTGAGGAAAA             CCCGCAG AATAG CTGCGGG             TTTTTTGTTATCAAA 100 36
HCN55_RS03680  706559 ..  706583 + -13.7  -4.39571   TGGGCATAAAAAAAA          GCTTGATCACG TTT TGTGATCAAGC          TTTTCCATTTATCCG 100 7
HCN55_RS03690 NONE
HCN55_RS03695 NONE
HCN55_RS03700  710034 ..  710058 + -13.6  -4.55295   CTTCCAAATAAAAAA         CCGCCC-TGCC GTCT GGCAAGGGCGG          TTTCTTTATGAAACA 100 30
HCN55_RS03710 NONE
        pcrA NONE
        ligA NONE
HCN55_RS03725  718117 ..  718141 + -18.7  -5.09762   ATGACTGATAGAAAA          CCCTTGTGCCA TAT TGGCACAAGGG          TTTTTATGTTACAAT 100 33
HCN55_RS03730  719291 ..  719316 + -14.1  -4.53163   GTGTAGATAGAAAAA         GCCAATGGGAT TCCA GTCCCATTGGC          TTTTATAATGTATCA 100 35
        gatC  722313 ..  722326 +  -2.4  -3.01162   CTGGACTAAAGGAGG               GACA CAAGAA TGTC                ATTATTTGATCATAA  42 32
        gatA NONE
        gatB  725231 ..  725248 +  -8.4  -5.67063   AACGCTAATAAAAAA             GCAGCC CTTAGA GGCTGC              TTTTTTTATGGTCAA 100 33
HCN55_RS03765  729408 ..  729426 + -14.6  -3.72051   AGTAAAAAACAAAAA             GCCTCAGC TCT GCTGAGGC             TTTCAGCTTGTTGAA 100 36
HCN55_RS03770  730661 ..  730705 + -16.1  -4.12902   AGCCAAGCTCAGAAT GTTGACAAAATCCTAAAAC AGTTTTC GTTTTAGGATTTTGTCATC TTTTCAGCGTGATTG 100 55
        rlmD  732566 ..  732594 +  -4.7  -5.05228   TAACACCATTAGCAA        GAGAGATAACT AAATTGG ATTTATCTCTC        TTTTTATCGTTTAAT  77 325
HCN55_RS03785 NONE
HCN55_RS03790 NONE
HCN55_RS03795 NONE
HCN55_RS03800  739262 ..  739272 +  -5.4  -3.93583   AGATGAGATTGTGAT                 GATG GTT CATC                 TTTATGACTAAATTA  63 4
HCN55_RS03825  744109 ..  744123 +  -5.7  -4.72201   ATAGAATGACAAAGA               CCCTT GCATA AAGGG               TTCTTTTTTATGAAA  75 53
        rapH NONE
        phrH  745525 ..  745539 +  -7.1  -5.24551   AGTGATCAGAAGAAA               GCCCT TAGCT AGGGC               TTTTTCTTGCTTTAC  90 14
HCN55_RS03840  746423 ..  746441 +  -8.8  -5.60993   GTGAGTAAGGAGTGA             GCAGGCTG TTA TGGCCTGC             TTTTTTTGTCCCGGA 100 33
        yeeK  747010 ..  747030 +  -9.8  -5.63857   ATGATAAAAAGAGGA            CACTCTTG CAGAT CAAGAGTG            TTTTTTTAGCTTTTT 100 49
HCN55_RS03850  747686 ..  747712 +  -6.7   -3.1458   TCAGTGCTTGATTAA        CATGTGGTAAAG GATT CTTTGCC-CATG         TATGTACTTTTTGGA  61 26
HCN55_RS03855 NONE
HCN55_RS03860  749073 ..  749095 + -13.5   -3.9461   TGAATAGTCTAGAAA           GACCTTCGG CGCTT CCGAAGGTC           TTCTTATTGAAAAAG 100 34
HCN55_RS03865 NONE
HCN55_RS03870 NONE
       cotJC  750330 ..  750345 +  -4.7  -3.41229   AAAATGGTCTGTTTT              TGCAG TTTGGT CTGCA               TTATAATCAAGGTGT  55 85
HCN55_RS03880  750938 ..  750955 +  -3.3  -5.69068   ATTACGGCAGAATAA             GCGTCCT TTGC AGGGGGC              TTTTTTGTCTTTTTC  84 26
HCN55_RS03885 NONE
HCN55_RS03890 NONE
        yesM NONE
        yesN  754819 ..  754851 +  -4.2  -5.58209   GAATTCAGAAGAAAA     CAGGGAGGCGCT-TCC GCA GGATAGC-CATCTCTG     TTTTTTTGACTTTCG  84 2
HCN55_RS03905 NONE
HCN55_RS03910 NONE
HCN55_RS03915 NONE
        yesR NONE
        yesS NONE
HCN55_RS03930 NONE
HCN55_RS03935 NONE
HCN55_RS03940 NONE
HCN55_RS03945 NONE
HCN55_RS03950  767345 ..  767358 +  -2.3  -3.60048   GAACCAATGCTCAAG               CGCTG TACG CACCG                GTTTTTTCAAGGGAA  47 106
HCN55_RS03955 NONE
        yesZ  770070 ..  770093 +  -6.8  -5.36441   AATTTGACAATCACA          GCTGATTC TTTGTATC GAATCAGC           TTTTTTCTATGGAGG  91 21
HCN55_RS03965 NONE
HCN55_RS03970 NONE
HCN55_RS03975 NONE
HCN55_RS03980 NONE
HCN55_RS03985  777581 ..  777598 +  -2.7  -3.71649   GCATCATGCAAAGCT             GAGCT TGCCGATT AGCTC              TTTCCGGTTTAGAAA  50 24
HCN55_RS03990  778374 ..  778393 +  -8.6   -5.2204   GACTCTTAGAAAAAA            GCTTGCAGC AAG GC-GCAAGC            TTTTTATTGATTGTA 100 39
HCN55_RS04015 NONE
HCN55_RS04020 NONE
HCN55_RS04025  782913 ..  782931 + -12.4  -5.32699   GAAAAGACGCTATAG             CCTGTCCG GAT CGGACGGG             TTTTTTAGTCTTTAA 100 26
HCN55_RS04035  784721 ..  784742 + -11.7  -4.89233   TATTAAATAGGAAAA           GTCCAGAAA GTGA TTTCTGGAC            TTTTTAGTCTTGCTC 100 35
HCN55_RS04045  789160 ..  789177 +  -9.9  -4.84363   GATATAGATAAAGAA             GACTGGA GACA TCCAGTC              TTTTTAGTCCTTTCG 100 34
HCN55_RS04050  791527 ..  791563 + -19.5  -5.68023   AAATAAGATGAAAAA    GAGCCTTGAGCGGGCGC ATT GCCTTCGCTCAAGGCTC    TTTTTTTGGTTATAC 100 35
HCN55_RS04055 NONE
HCN55_RS04060 NONE
HCN55_RS04065 NONE
HCN55_RS04070 NONE
HCN55_RS04075  796576 ..  796595 +   -15  -5.07567   GCTGGATTAAAAAAC            CCCCTGCC GCCT GGCAGGGG             TTTTTTCAGCTATGC 100 31
        yfmT NONE
HCN55_RS04100  802697 ..  802744 + -15.7  -2.66272   CGAAAAAGCGCTTGA GGAAGAGTAAGAGACCGGGGA CAAACA TCCCCGGTCTTTTTCTTATCC TGCATTTCCATGAAA 100 16
HCN55_RS04105  804734 ..  804755 + -10.8  -5.44721   CTGGAAAGCTAAAAA           GCGTGGCC GCAGCA GGCCGCGC            TTTTTTTCACATAAT 100 29
HCN55_RS04110  805314 ..  805337 +  -3.1  -5.80727   AACAGGAAAGTGAAA          GACGGGT-GC TGTAT GCTGCTCGTC          TTTTTTATTGTTTTT  88 40
HCN55_RS04115  805860 ..  805875 +  -5.4  -4.72007   GAAAAGTTTGTTAAA              CGCTAT TTTT GTAGCG               TTTCTTTTAATGGAA  75 39
HCN55_RS04120  807111 ..  807132 + -10.9   -5.2204   GCATTAATAACGAAA           GACACTGCG CATA TGCAGTGTC            TTTTTATTCGTTATA 100 34
HCN55_RS04125  807636 ..  807655 +  -7.8  -5.66684   AATGGCAGTAAAAAA            CCCGCC CTTTAGCA GGCGGG             TTTTTTTATAAATTA 100 113
HCN55_RS04135  810534 ..  810546 +  -6.2  -5.88565   ACGAAATAAAAAGAA                GGGC GAAGA GCCC                TTTTTTTGTTGTAAA  93 32
HCN55_RS04140  811060 ..  811078 + -11.7   -2.5497   CATCGAAACACAAAA             GGAGGGC AAAAA GCCCTCC             CGTTTTCATCTTCAT  80 44
HCN55_RS04155  815670 ..  815702 + -13.7  -5.10933   GTGTAGTAATGTTCA      GCTTGTAGAAAAAAC AAT GTTTTTTCTACAAGA      TTTTATTTTAAATGC 100 81
HCN55_RS04185  821100 ..  821125 + -13.4  -5.46629   AAAGCAAGGAAAAAA         CCAAAAGGCC AATGTC GGCCTTTTGG          TTTTTTTGCGGTCTT 100 39
HCN55_RS04190  822552 ..  822574 +  -9.2  -5.32565   TAAGAAAGTGAAAAA           CACAAAGGGT GCT AACCTTTGTG           TTTTTTAATTAATTA 100 38
HCN55_RS04195  824112 ..  824128 + -12.3  -6.09196   TGGTAGAAAGAAAAA              GGCAGAC GCG GTCTGCC              TTTTTTTATTTTCAC 100 35
        yflR NONE
        yflQ NONE
HCN55_RS04210  827474 ..  827489 +  -6.1  -5.52384   GACAGGAAATTAAAA              TCCCG ACATCC CGGGA               TTTTTTTCATGCCGA  91 28
        citM  829019 ..  829031 +  -2.7     -2.89   AACATTCCGGAGGTG                TCATT ATG AGTGA                TCCTTATATGCCGCT  42 76
HCN55_RS04220  829819 ..  829837 + -11.7  -5.77677   TTATCGTCTATTTGA             CACCCGC ACCAC GCGGGTG             TTTTTTATTGTTTTC 100 26
HCN55_RS04225  831176 ..  831187 +  -5.8  -4.56597   AAAATCTCGACACGC                CCGT CATC ACGG                 TTTTTGACCCAGCCG  72 173
HCN55_RS04235  832033 ..  832056 + -11.7    -3.695   GTTGAATAGAAAAAA          GCCGCGCAT ATCAAC GTGCGCGGC           TTTGCCATATTTAAG  91 32
HCN55_RS04260  835303 ..  835324 + -15.9  -5.42164   CTGTCAAATAAAAAA           GCGGAGAGG GCAA CCTCTCCGC            TTTTTCTTATTTATC 100 30
HCN55_RS04270 NONE
HCN55_RS04275  837945 ..  837969 +  -7.1   -5.0916   TTTGTCTTGTCTGCA          GGATGGCGATT GAT AAAAGCCATCC          TTTTTATGTTCCAAG  90 41
        treP  845066 ..  845101 +  -4.7  -4.36595   AACATAAATAACAAG    TGGGGAGCGGG-ACGT GTTGA ACGTTCCCTTTTCCCG    TTTTCAATTTAAATA  68 30
        treC NONE
        treR  847560 ..  847581 + -12.3  -5.69793   GGGGAAATGAGAGAG           GCGC-CTGCC TGC GGCAGCGCGC           TTTTTTGTTTGGTAT 100 31
HCN55_RS04320  848367 ..  848391 + -14.3  -5.28778   GGGTTTAAAAGAAGA          AAGCTGCTCGC ATA GCGAGCAGCTC          TTTTTTATGCCTGAT 100 33
        yfkM  853553 ..  853572 + -11.4  -5.87996   AGAAATAAGAAAAAA            CGGACGCT CTTG GGCGTCCG             TTTTTTTGTTGCTTA 100 33
HCN55_RS04345 NONE
HCN55_RS04350 NONE
HCN55_RS04355  857112 ..  857136 + -16.5   -4.8622   ACCATTAGCATAAAA          GCCTCCTGACA TGA TGTCGGGAGGC          TTTTTGATTAAGAAG 100 192
         cax NONE
HCN55_RS04370  860416 ..  860436 +  -9.8  -6.08342   AAGATAAATAAAAAA            CTGATTCC AACTC GGAATCAG            TTTTTTTGTTTATTG 100 34
HCN55_RS04385  862743 ..  862759 +  -6.5  -5.80364   AGATTGGGAATAAAA              CCGCG TGCCCGC CGCGG              TTTTTTTATTGGCAT  93 28
        pdaA  863637 ..  863668 +  -9.5  -4.79683   CGTCTTTGTAAAAGA      GAAAGACCTCTCC TTAAAC GGAGAGGCTTTTC       TTTATTTTATACATT 100 30
HCN55_RS04405  866637 ..  866657 +  -9.8  -2.55351   GAAAAAACCATTTCA            CTTTCTGC CATCC GCAGAAAG            CTTCATATAGAAACG  73 92
        rlmD  868124 ..  868165 +  -2.2  -4.72272   TAGTTTTCCTAATAA GACCTGGATTTCGGTA AAATAAACAA TTCCGATTTCCGGGTC  TTTTTCGTGCGCAGC  64 65
HCN55_RS04415  869048 ..  869071 +  -7.5  -3.89837   TATCTTATGAGTGAA          GACTGC-GAC ACTTA GTCAGCAGTC          TATTTTATGGTTCTG  74 97
HCN55_RS04420  870753 ..  870779 +  -5.9  -5.24129   TTCTTGACTAAAATA         AACCTGGATTT TCGGT AAATCCGGGTC         TTTTTTGTACGCAGC  83 93
HCN55_RS04425 NONE
HCN55_RS04430  872093 ..  872111 +  -8.8  -5.82316   TCGATCATTGTCAAA             GGCCGGGT GAT ATCCGGTC             TTTTTTTTGCATGCT 100 66
        acoA NONE
        acoB  874296 ..  874308 +  -3.3  -3.17075   CACGCTTGAATTGCT                TGGCG AGC CGGCA                TTGAATTAAAGGGGG  47 4
        acoC NONE
        acoL  876936 ..  876962 +  -9.4  -5.64873   ATAATAAAGGAAAAA         GCAGGCGCAT GGATATA AGGCGCCTGC         TTTTTTATTGTTGAA 100 37
        acoR NONE
HCN55_RS04460  879098 ..  879120 +   -12  -4.77165   AGGATTAAACAAAAA           TGGCCCGCTT CAT AAGCAGGCCA           TTTTGTTATCCGCGC 100 33
HCN55_RS04495  884660 ..  884711 +  -3.9  -2.85668   ATATCATAAATGAAA TTCCCCCATTTTCGAATCTGTAAT TGTAT ATAATAGAAA-GAAAATGGGGGGA TCTGATATGCAGCTC  46 32
HCN55_RS04500 NONE
        malP  887087 ..  887104 +  -9.1  -4.55798   AATCAATAAAGACTG             CCCTCCT TTTC GGGAGGG              TTTTCGTTTGCCGTC  90 32
HCN55_RS04510 NONE
HCN55_RS04515  890715 ..  890737 +  -8.5  -5.80364   CCAATTTGAGAAATA           GACCTTTGT CCTGC ACAGAGGTC           TTTTTTTGTTACAGT 100 25
        catD NONE
        catE  892156 ..  892183 + -14.9  -5.98675   GTGATTTAACTGCAA        TCCCCTTGCCG AAATAA CGGCAGGGGGA         TTTTTTATTTTTGTC 100 32
HCN55_RS04530  893232 ..  893243 +  -5.8  -3.79482   CATATGATAAAGACG                CGAG AAAT CTCG                 TTGTCTTATAATCTT  63 70
HCN55_RS04535 NONE
HCN55_RS04540 NONE
HCN55_RS04545  896983 ..  897010 +   -10  -5.45802   AAATGAGGGAATGCG        CCGCATATGA CATAAAGT TCATATGCGG         TTTTTATTTTCCAGA 100 39
        lnrJ NONE
        lnrK  898989 ..  899003 +  -7.1  -5.52986   ACGCTTCTCTGAAAA               GGCCT TTTAC AGGCC               TTTTTTTCATGCCCT 100 60
        lnrL NONE
        lnrM NONE
        lnrN  902412 ..  902432 + -11.2  -5.50499   TCCGAGCCTAAAAAA            CATCTGCC GTTTA GGCAGATG            TTTTTTTGCATGTGG 100 30
        estB  903950 ..  903972 +  -3.4  -5.21709   ATCTTCAAAAAACAA           CCTGCTGT CTCCGTT ACAGTGGG           TTTTTTCGTCTGAGA  73 42
HCN55_RS04585  905217 ..  905240 + -12.4  -4.59982   GCAGGGTGAAAAACA          AGCGGCAGGA GGGC TCCTGCCGCG           TTTCTTTACTTCTCA 100 32
        bstA  907857 ..  907869 +  -2.6  -4.27316   CTCGCATGAATGGCG                TCGC TTATC GCGG                TTTTGACTTCAGGAA  58 140
        mprF  912619 ..  912642 + -15.4  -6.01187   GGCAAAAGCAAAAAA          GACTCCGTCT AATA AGACGGAGTC           TTTTTTTATTTCGTT 100 14
HCN55_RS04625  914747 ..  914764 +  -4.1  -4.20696   TCGCAAGAAGGGGGG             CGAAGCT ATGA AACTTCG              TTTTGGCGTTACTGC  61 15
HCN55_RS04630  915794 ..  915819 + -13.5  -5.55664   TTCTTAATCGTTACA         CCCATTTTCTT AAAA AAGAAAATGGG          TTTTTTTGATAATGA 100 34
HCN55_RS04635  916817 ..  916836 +  -6.6  -3.13906   AAGATGCACTTTCCG            TTATCATT ATGA AATGATAA             TCATTTTCAATTGCA  61 61
HCN55_RS04640  917458 ..  917484 + -16.7   -4.8622   CTGAAATGTAAAAAA         CCCCTTGTCTC AAACG GAGACAAGGGG         TTTTTCATTAACGAG 100 30
        recX NONE
HCN55_RS04665  920036 ..  920054 + -13.2  -5.27335   AATAAAGCGTAACAG             GAGGCTGA TGA TCAGCCTC             TTTTTGTTTGCAGCA 100 36
HCN55_RS04670  921366 ..  921386 + -11.2   -4.1023   ATAAAGGGTAAAAAA            CAGCTGCA GTGTA TGCAGCTG            TTCTTCTTTACCGTT  89 30
HCN55_RS04680  921944 ..  921965 + -10.1  -5.52347   CTTTTGCATTAAAAA           CCTGCCGTT AACG ACCGGCAGG            TTTTTTCATTTTCTT 100 29
HCN55_RS04685  922607 ..  922624 +  -5.5  -4.71061   CAAATGCGATAAAAA             GGCAGGC CGAG GCTTGTC              TTTTTGCCTATGCAT  73 29
        spdL NONE
HCN55_RS04695  923888 ..  923906 +  -9.6  -5.01546   AATTTCTCTCCATCC             GTCTGTCA TAA TGGCAGAC             TTTTTCTGTGCGTTT 100 46
HCN55_RS04700  925100 ..  925111 +  -2.2  -3.51573   ACTGAAAATACCAAG                C-GCC ATT GGCAG                TGCTTTTTTTGCGTG  47 36
HCN55_RS04705  927726 ..  927759 +  -8.1  -5.28826   TTTTATATAAGACGT     AAAAAGCCCGGCTCT ATAT AGAGCCGAGCTTTAA      TTTTTTCTGAAGTTT 100 5
        mutY  930110 ..  930120 +  -2.4  -3.38162   TCATTGCGCTTCATT                 CCGC CGC GCGC                 TTCAATTTCTTGCGT  45 88
        fabL NONE
HCN55_RS04730  931455 ..  931479 +  -5.8  -5.56264   CTGAAACAGAAAAAA         GCACTT-CATC TTCG GGTGGAAGTGC          TTTTTTCTGTTTGAA  91 44
HCN55_RS04735  931879 ..  931904 +    -9  -5.24291   GTGTAGTGCAGGAAT         GTGCCATTCC CCGGCC GGAATGGCTC          TTTTATTTTCATTTT 100 35
HCN55_RS04740  932558 ..  932578 +  -6.9  -4.62336   ATGGTTACGTAAAAA            CCTGTTG CGGGGTA CAACAGG            TTTTTCACATGGGCT  81 40
HCN55_RS04745  934382 ..  934411 + -11.7  -5.76633   GAACTAAAACATCAA       TCTTATATCCTTT TAAC GAAGGATATAAGA        TTTTTTTGTATATAA 100 34
         bcp  937654 ..  937667 +  -3.1  -3.09286   AAAAGTAAATCTCTA               TGAGC CTAT GCTTA                CTTTTACCCTGATAT  45 33
        perR  938205 ..  938243 + -13.4   -3.6834   AAAAAGAAAATCATT   AAAAATAAGCTGACCG CACGAAA CGGTCAGCTTATTTTA   TTTCGACATTTTCTT 100 24
HCN55_RS04775  939767 ..  939786 +  -2.2  -2.65751   TAAATCAAAAAAACA            TTTGAC AAAAGAAA GTCAAA             ATGTTATATTAATAA  40 106
HCN55_RS04780  941595 ..  941620 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 88
HCN55_RS04785  944672 ..  944688 +  -2.3  -2.84587   AGTTTTGAGAGAATA              AGTTTTT CAA AAAAACA              CTTGATTTTCTCAAG  41 66
         rrf NONE
HCN55_RS04795 NONE
HCN55_RS04800 NONE
HCN55_RS04805 NONE
HCN55_RS04810 NONE
HCN55_RS04815 NONE
HCN55_RS04820 NONE
HCN55_RS04825 NONE
HCN55_RS04830  945570 ..  945580 +  -2.6  -3.83026   CTCTTGCCGGCACTG                 TTTT TTC AAAA                 TTTAATGTGGAGGGG  52 27
HCN55_RS04835 NONE
HCN55_RS04840 NONE
HCN55_RS04845 NONE
HCN55_RS04850  945953 ..  945965 +  -2.7  -3.09933   ACTTTTTATATCAAC                TGCAT ATA ATGTA                TTAAGTCCATTAAAA  43 42
HCN55_RS04855 NONE
HCN55_RS04860 NONE
HCN55_RS04865  946225 ..  946259 + -13.8  -4.52142   AAGTCCGGCCCTCGG     CACCAATTTTACTTAC ATG GTAAGTTGAATTGGTG     TTTGTGTTTTATCAT 100 21
HCN55_RS04870  946587 ..  946608 + -13.1  -5.84011   CGGTATACTGAAAAA           CCCGTTTCT TAAC AGAAACGGG            TTTTTATTTTTTATT 100 36
HCN55_RS04880  947781 ..  947812 +   -16  -5.00846   TGGAGCAATAAAAAA      GAGACGGCATCTCA TCTT TGAGATCCCGTCTC       TTTTTGTGGTCTTTG 100 30
HCN55_RS04890  949090 ..  949113 + -11.8  -5.33785   TCTTTCTGACTGTAA          CCGGGTTCAT TTAT ATGAATCCGG           TTTTTTGTGCTGGTT 100 248
        thiC  950956 ..  950981 + -14.9  -5.40072   TATCAATAAAAAAAA         TGAAGATGGAG AATG CTCCATCTTCA          TTTTTTTAGAAAAAC 100 32
        senS  952783 ..  952800 +  -6.9  -4.84529   CTAAATATAAAAAAA             CCCGCTG ACTA CAACGGG              TTTTTGCATTTCTCC  83 18
HCN55_RS04915 NONE
HCN55_RS04920 NONE
HCN55_RS04925 NONE
        ssuD NONE
HCN55_RS04935  959084 ..  959100 +  -7.9  -3.63744   TGCATCATTAGAATG              GGCGGCT TCA GGCCGTC              TGTTTTACAAAGCGG  69 30
        rpsN  959468 ..  959493 +  -9.7  -5.85011   GCTGGTAAGAAAAAA         CTCCGGC-CGAT TAC AGCGCGCCGGAG         TTTTTTTCGTTTTTC 100 33
HCN55_RS04955  960436 ..  960472 + -10.3  -5.71712   TACATACGTTATTAA    CGCAGTGTTTCGTTTCT CAG ATAAACGAAGTATTGCG    TTTTTTTATGTGAAA 100 40
        queG  962404 ..  962423 +  -5.8   -5.4251   AGCAGAAGGAAAAAA            CACTTGAGA TCA TC-CAAGTG            TTTTTTCTCTATAAA  89 52
HCN55_RS04970 NONE
        trmL  963907 ..  963929 + -15.6  -5.42862   TAAAATAGTGAAAAA           CCCGCTCATC GAT GATGGGCGGG           TTTTTTTGCGGATGT 100 33
HCN55_RS04980 NONE
HCN55_RS04985 NONE
HCN55_RS04990  966112 ..  966133 + -12.3  -5.77677   TCTGTTATACAAAAA           GGGTGCTCT TTCA GGAGCACCC            TTTTTTATTCTTTTC 100 49
        prkA  968340 ..  968364 +   -10  -4.46581   AACCGATAAGCAACG          TGACCCGTCC GAATA GGGCGGGTTA          TTTTGTCCCATTTTC  91 32
        yhbH  969698 ..  969711 +  -5.2  -6.25578   TTTTCGTAATGAAAA               GCCC ATTTCA GGGC                TTTTTTTTATTTAAT 100 32
HCN55_RS05005 NONE
HCN55_RS05010 NONE
HCN55_RS05015 NONE
HCN55_RS05020 NONE
HCN55_RS05025 NONE
HCN55_RS05030 NONE
HCN55_RS05035 NONE
HCN55_RS05040 NONE
HCN55_RS05045 NONE
HCN55_RS05050 NONE
HCN55_RS05055  977461 ..  977484 +   -14    -5.252   AAACTAATAAAAAAA          GCTGTTTTGC TTAT GCAAAACAGC           TTTTTTGTCAAAATA 100 34
HCN55_RS05065  978995 ..  979021 + -11.8  -5.93809   TCTTTCAGATTGGAA         GAATGAATTCGA ACA TTGAATTCATTC         TTTTTTTTCTGAAAA 100 7
HCN55_RS05075  981670 ..  981693 +   -14  -5.40072   CGTAACATATGAAAA          CGTGTAATCC AAGA GGATTACACG           TTTTTTTAACGGCCA 100 36
HCN55_RS05085  982876 ..  982907 + -15.4  -3.78329   TAACGCTGAATAAAT      GAAAGAAGCCGCACA ATT TGTGCGGCTT-TTTC      TTTGCGTTAATGACA 100 28
HCN55_RS05090  984143 ..  984162 +  -2.2  -3.90318   CAGCATAGAAGCTTG            TGCTTT AATCGCGC AAAGCA             TTTGTCGGCTGATGA  53 206
        yhcR NONE
HCN55_RS05105  988880 ..  988899 +   -10  -4.71426   CGAGTGACTTAAAAA            GCCG-AGGC AGT GCCTGCGGC            TTTTCTTCATGAAAA  91 29
HCN55_RS05115  990332 ..  990357 + -11.3  -4.96848   ATAATCATGCGGCAA         GGGCTTTTCTA TTTT TAGAAAAGCTC          TTTTTGTATCAGAGA 100 37
HCN55_RS05120  990887 ..  990907 + -11.9   -4.1822   TTCATTAATAAGAAA            GAGCTTGCA GTG TGCAGGCTC            TTTCTTCACATAAAA  93 33
HCN55_RS05125 NONE
HCN55_RS05130  993237 ..  993254 +  -9.8  -5.40072   ATAATTCCCAAAAAA             CCCGCC TGAATT GGCGGG              TTTTTTTAAACAAAA 100 37
HCN55_RS05135 NONE
        glpP  995702 ..  995712 +  -4.6  -4.46576   CAAATGTTTATGCAC                 CCGT AAA GCGG                 TTTGTTGTGGTTTTT  66 123
        glpF NONE
        glpK  998172 ..  998220 + -21.4  -5.19879   GTCCTGAGATGAGGA GAGACCACAGCA-CCAAAGTGTA AGCA TGCACTTTGGCTGTTGTGGTCTC TTTTTCTATTTACCG 100 81
HCN55_RS05155  999929 ..  999952 + -15.4  -4.89063   TTGAGCAATAAATCA          TAACGGGCTG TCTG CAGCCCGTTA           TTTCTTTTTACGTGC 100 30
        pgcA 1001813 .. 1001837 + -11.5  -5.69262   ATAATTCAAGTATGA          GCTGGGTCATT GTA AATGATCCGGC          TTTTTCTTTTTCTCA 100 37
        yhcY NONE
        yhcZ NONE
HCN55_RS05175 1004239 .. 1004260 + -15.9  -4.62441   CGCAAAAGCAGGAAA           TCCCGGCGT CTAA ACGCCGGGA            TTTGTTTATGTGAGA 100 13
HCN55_RS05185 1005040 .. 1005064 +  -5.6  -4.55887   GGCTCTAATAAAAAA          CTGTACAGCC GTTAA GGCCGCACAG          TTTCTGTTTTTAGAA  73 33
       spoVR 1010342 .. 1010361 + -12.2  -5.46706   TATTTATAAAAAAGA            GGATGCAG CGTT CTGCATCC             TTTTTATTTTCCAGT 100 32
        lytE 1013298 .. 1013315 + -11.3  -5.63103   AATTTTTAGAGAAAA             CCCGTTC ATTG GAACGGG              TTTTTTTCATTAGAC 100 39
HCN55_RS05225 1015417 .. 1015427 +  -5.4  -2.99972   AATATACCGGTGCCA                 TTCC CGA GGAA                 GTTCTTTCATAACAT  53 3
HCN55_RS05230 1016387 .. 1016416 + -14.5  -2.79312   TTTCAACGTAATCAA       CGAAAAACCAGCT CAAG AGCTGGTTTTTTG        TGTGGTGAAAAATTT 100 30
        bcaP 1018042 .. 1018065 + -10.3  -4.79752   TAACCTTTTGATAAA          GAGAGCGGCC ATACA GGCCGC-CTC          TTTTCTGTTCTTGGC 100 38
HCN55_RS05240 1019507 .. 1019528 + -13.7  -5.68438   TATCATTTTAAAAAA           CAGGCTCCG TTTC CGGGGCCTG            TTTTTTATTTAATAA 100 30
HCN55_RS05250 1021493 .. 1021510 + -11.3  -5.00616   GGTATAACGAAAAAA             GACGCCT GAAA AGGCGTC              TTTTTTAAAAGCCAA 100 34
HCN55_RS05270 1024548 .. 1024567 +   -10  -4.70879   GGAAATATAACAAAA            GCTGAGGG CGAA TCCTCAGC             TTTTTGGCGTTTAAA  91 31
HCN55_RS05275 1025311 .. 1025344 + -14.1  -3.54743   CTGAAACTGTGAAAA     TAAGAAAAGCACCCT ATAC AAGGTGCTTTTCTTA      TTATGCTTCCTGCTG 100 60
HCN55_RS05290 1028524 .. 1028548 +  -8.7  -4.96848   AGAAGGCAAAGAAAA          GAAAACAGTTT TCA AGGCTGTTTTC          TTTTTATATCCGCAA 100 40
HCN55_RS05295 1030205 .. 1030229 +  -7.2  -5.84432   TGCTGAACAGTGCAA          CCTTGAGC GAGAAATAA GCTCAAGG          TTTTTTTATATTGTG 100 9
HCN55_RS05315 1032085 .. 1032103 + -17.4   -4.4767   TGAATTGAGAAATGA             CCCCGGCG TTT CGCCGGGG             TTTTGTGCTGCATAA 100 68
        mscY 1033313 .. 1033337 +  -8.6  -4.77036   CGGGCTTAAAAGAGA          GACTTCGTCT GACAG AGGCGGAGTC          TTTTTCATGGTAAAA 100 32
        srtN 1034116 .. 1034138 +  -9.1   -5.5112   TTTGGGCATGAAAAA           GTGAGCCGC TTTAT GCGCCTCAC           TTTTTTATTCATGAA 100 22
         dat 1036139 .. 1036163 +  -7.9  -5.75538   AATGAACGAAGAAAA         GAG-CCCGCT TTTTAC AGCGGGGCTC          TTTTTATTTTTTAAC 100 40
HCN55_RS05350 NONE
        bmrC NONE
        bmrD 1042386 .. 1042407 + -11.7  -5.07011   CATAACGCTCAAAAA           CCCAAAACA ATCG TGTTTTGGG            TTTTTGGTTTATGTA 100 36
HCN55_RS05395 1048018 .. 1048032 +    -5  -3.51785   GCAATGATGAAAGGA               GCTATT TAC AATGGC               TGTTAATTTTTATGA  57 108
HCN55_RS05400 1048391 .. 1048412 + -11.7   -5.4833   GGCTAATAAGCAAAA           TCCCTTCTT GGAT AAGAAGGGA            TTTTTTATTCACTCA 100 35
HCN55_RS05410 1050855 .. 1050883 + -11.7  -5.03145   AACGTGTGTAAAAAA       GCCGCTCGCGCC CTGACA GGTGCG-GCGGC        TTTTTTGCCGGATTG 100 30
HCN55_RS05415 1052458 .. 1052479 + -14.5  -5.65177   TGAAAAAACGACAAA           GCAGCACTG ATTA CAGTGCTGC            TTTTTTTATCCCTGT 100 16
HCN55_RS05435 1055548 .. 1055590 + -12.3  -2.54896   AAGCGTAACAGATCA GCCGGAAAGCTGATCATCTGT GAA ACAAA--ATCAGCTTTCCGGC TGCATTGACTAAACG  82 33
HCN55_RS05445 NONE
HCN55_RS05450 1058030 .. 1058051 + -12.3  -4.67607   AAACTGATTGGAAAA           CAGCCTGGG GATT CTCAGGCTG            TTTCTTTATTGACAG 100 34
HCN55_RS05455 1059356 .. 1059366 +  -2.4  -3.63305   TGCTTGATACATGAG                 GCGG TGA CAGC                 TTTGCGAATTATATC  47 27
        sbcE 1062226 .. 1062242 +  -5.2  -2.78463   TGCATTTCATAGCAG              CCAAAT CATCC ATTTGG              TGTCATAAAAGAGGT  50 1
        yhaM 1063277 .. 1063306 + -11.6  -4.76644   TAAATAACTTAAAAA       GGACTGATGCTGA CATAT TCAGC-TCAGTCC       TTTTTGATGCGTCTT 100 34
        yhaL 1063611 .. 1063637 + -22.4  -6.01369   CATCGCATAAAAAAA         GCTGTGCGGCTC AAT GAGCCGCACAGC         TTTTTTTATTATTTA 100 31
       yhzE1 1064780 .. 1064804 + -10.8  -4.68908   TACTAAGCAGCCCGA          GGATCGCTTG CAACA TAAGCGATCC          TTTATTTTCACTAGC  95 35
       yhzE2 1064995 .. 1065021 + -15.3  -4.59293   AATCAACATAAAAAA         GCATAGCTGCT TAATC AGCAGCTATGC         TTTCTTTCGTATTTA 100 39
HCN55_RS05500 1066528 .. 1066543 +  -6.8  -2.79302   TTTCCATAAAATCAT              CGCCGT AGAT ATGGCG               TATCATACACATCAT  55 162
HCN55_RS05515 1067893 .. 1067914 + -10.1  -4.53705   CTCTGTTCAAAAAAA           CCTCTCCCG GAAG CGGAAGAGG            TTTTGTGTGACAATT  91 64
        ecsA NONE
        ecsB NONE
HCN55_RS05545 1073401 .. 1073426 + -11.9  -5.64274   GGATATTAAAGGAAA         CAGCCGGAG AATAAACA CTCCGGCTG          TTTTTTTATAGCTGA 100 12
HCN55_RS05570 NONE
        hemE NONE
        hemH NONE
        hemY 1082894 .. 1082913 + -10.7  -5.58454   TTTATTCAGCTAAAA            CCTCCGC TTTATC GCGGAGG             TTTTTTTGATGTGCA 100 28
HCN55_RS05590 1083595 .. 1083619 +  -4.4  -4.32857   TTGTATGTTGTCAAA         GGATTGTC-AG CGAA CTAGATAATCC          TTTCTCTTTGCAAGA  63 8
HCN55_RS05595 1086018 .. 1086043 + -13.5   -5.8187   CTTCATAAAGAAAAA         GAACTTGTTTC CTTG GAAACAAGTTC          TTTTTTTGTTACATC 100 33
HCN55_RS05605 1088062 .. 1088077 +  -6.2  -5.34365   GTGTTTTTTACAAGA              GAAACA ATGG TGTTTC               TTTTTCTTCTTCTCG  91 155
HCN55_RS05615 NONE
HCN55_RS05620 1089810 .. 1089835 + -17.6   -4.4078   TTAAAGATTAAAAAA         GCCTGCGGGG CAAGAA CCCCGCAGGC          TTTTCATTAACCAGA 100 30
HCN55_RS05635 1092430 .. 1092440 +  -2.4  -2.77135   TGTGGGAAGGATAAA                 GGAG GAG CACC                 ATGTTATTTATAGAC  41 27
HCN55_RS05640 NONE
HCN55_RS05645 1094155 .. 1094180 +  -6.2  -5.90231   CTATGACAGTACTGA         CACTC-AGGGC TTTTT GCTCTTGAGTG         TTTTTTTCTGTTTCT  93 35
        lcfB 1095806 .. 1095838 +   -18  -4.26079   TTTGCCCCAATAAAA      TGAAAAAGCGAAGC GGTTA GCTTCGCTTTTTCA      TTTTCAATCCTTTGC 100 28
HCN55_RS05660 1097670 .. 1097695 +  -9.1  -4.93316   GCTGACAAATAAAAA         GAAGCAGGT ATGGAGGA ACCTGCTTC          TTTTTACTATTATTG 100 29
HCN55_RS05670 NONE
HCN55_RS05675 1100807 .. 1100836 + -11.6  -5.24129   GCTTTAACAGGATCA       GCTTGCAGAGAA TGTTAT TTTTCTGCAAGC        TTTTTTGTGGACAGG 100 34
HCN55_RS05680 1102133 .. 1102149 +  -5.1  -3.61232   CGGGTGCTTTGAAGC              TCCGG GTCACCG CCGGA              TATTTCTGTCAGCAG  57 133
HCN55_RS05715 1109844 .. 1109864 + -14.1  -3.71888   AACGGATAATAAAAA            GCCAATCCT TGA AGGATTGGC            TTATTCGCTCTGCTT 100 32
        comK 1110981 .. 1111005 + -11.4  -3.74251   TTAGAAAAATAGGAA          GGAGCTGACC GAACA GGGCAGCTCC          TTTCATAAAGCTATG  91 37
HCN55_RS05735 1112403 .. 1112440 + -15.3  -2.71144   CCTGTGAACGGTAAA   TAAGAAAAAGCAATCTGG TGT CCAGATTGCTTTTT-TTA   TGCTTAGGCCGCCTG 100 27
HCN55_RS05755 NONE
        lepB 1116049 .. 1116066 +  -7.1  -2.51393   GAGCTATAATCAAAA             TTGTTAC CTGT GTAACAA              AATTTATATATTTTT  60 111
HCN55_RS05765 1117646 .. 1117656 +    -4  -3.88498   CAGCCGAGTATAATT                 CAAT TCG ATTG                 TTTCATCTGTAACAA  56 28
HCN55_RS05770 1118252 .. 1118269 + -11.3  -4.88295   TTTTTAAATAAAAAA             CACGCAC TGCG GTGCGTG              TTTTTCGCTTTGTTT 100 30
        ntdR 1124031 .. 1124051 +  -5.5  -4.68593   TTTATATAAGAAAAA            GAGGTTA TTCATTT TAACCTC            TTTTTCAATCGTAAG  73 70
HCN55_RS05810 1128511 .. 1128532 + -10.2   -5.0538   CTGTCCAAATAAAAA           GAGGGTTC TTTTTT GAACCCTC            TTTTTTACGCTGCCA 100 29
        addB NONE
        addA NONE
HCN55_RS05835 NONE
        sbcC NONE
        hlpB 1141747 .. 1141773 +  -8.8  -4.51196   AAAAATGACTAAAAA        GCAGCC-CTCT CTTTGC AGAGCGGCTGC         TTTTATCCGTTTCCA  90 33
HCN55_RS05890 1146442 .. 1146463 +  -4.3  -5.32882   GCTGAATAAAACTGG           AGGGCGG ACCCGGAC CCGCCCG            TTTTTTCTGATAATC  81 36
HCN55_RS05895 1146921 .. 1146941 +    -9  -6.15717   GAAAAACCTATGAAC            CCGGCTCT TTGAT AGAGCTGG            TTTTTTTTATATTTA 100 43
        wprA 1149763 .. 1149781 + -11.7  -5.63517   AAAAGTAACCAAAAA             GCGGTGC TCGAT GCACCGC             TTTTTTATTTGCGCC 100 33
        asnB 1152415 .. 1152451 +  -6.1  -5.24129   AGATTTAAATAAGAA   GGATAGAT-GAGCA GGGAAATATA TGCTCTATCTATCC    TTTTTTGTACAACAG  83 77
        farP 1154035 .. 1154055 +  -6.8  -3.03243   GATATCTAAAAAACA            CCCGGC CTTGATTGA GCCGGG            TGTTACGCCATACCT  60 32
HCN55_RS05930 NONE
        degA 1157445 .. 1157460 + -10.4  -5.32944   CGCTCAACACATGAG              CCCGCT AATG AGCGGG               TTTTTTCATTATGAC 100 27
        iolX 1158720 .. 1158741 + -11.6  -4.52142   CTTTCCGCAAAAAAA           GCAAGGGC ATTTTA GCCCTTGC            TTTCTCTTTTCTCAT  95 65
HCN55_RS05955 1161861 .. 1161874 +  -5.9  -3.76402   TGTGAATGACAGCCC               CGCTG AAAT CGGCG                TTTGATAAATCGCAT  61 413
HCN55_RS05965 1163139 .. 1163154 +  -6.1  -5.42131   ACTCATAAGAAAAAA              CCCGA CATTGA TCGGG               TTTTTTATATAATTC  89 33
HCN55_RS05985 1166608 .. 1166618 +    -4  -2.55361   CAACGATAGAGAGGG                 TCAT AAT ATGA                 ATGATTTTTCACTAG  45 15
HCN55_RS05990 1167384 .. 1167414 +  -8.3  -2.96205   TGTAAAATAGCGGCT      GCGG-GGCTCTCGT CGTG AAGAGAGCCTCTGC       CTATTATTTTTTATG  67 36
HCN55_RS06030 1175686 .. 1175718 + -17.8  -5.76633   AAAATAGCATGAAAA     CGGCTCGC-CTGCAG CAGA CTGCGGAGCGAGCCG      TTTTTTTATGTCTAG 100 34
HCN55_RS06050 NONE
HCN55_RS06055 NONE
HCN55_RS06060 1179189 .. 1179218 + -13.7   -5.0133   AGTAGAGTAGAAAAA       GAAGGGCAGAG CGAAATAT CTCTGCCCTTC        TTTTTTGGGAAAATA 100 31
        nprB 1180933 .. 1180984 + -24.3  -4.63218   GCTGTCGGCATTCTA TGAGCAAACAAAAACAGTCAGGAC ACAGA GTC-TGACTGTTTTTGTTTGCTCA TTTTCTTAAAAAGAA 100 23
HCN55_RS06075 1182826 .. 1182844 +  -5.2  -3.45023   TGACGAAAGCAGGTG             GAAGTCGT GAA ACGGCTGC             TTGTGATGCTCCTCC  55 38
HCN55_RS06080 1183290 .. 1183312 + -17.8  -5.80364   TGAAGTCAAATAAGA           GGCTATGGCG AGT CGCCATAGCC           TTTTTTTATTGCAGT 100 28
HCN55_RS06100 1185463 .. 1185477 +  -2.8   -2.6563   TGAATGGTTTGAAAC               GTACTT ATA AAGCAC               TAAGTTATTAACAAG  41 16
HCN55_RS06105 1185854 .. 1185879 + -11.9  -5.03314   CAATAAAACAAAAAA         GGACAGCCTGA CATG TGAGGCTGTCC          TTTTTTACAGCTGAA 100 35
HCN55_RS06110 NONE
HCN55_RS06115 NONE
HCN55_RS06120 1188102 .. 1188122 + -15.5  -5.61596   TGATGATGATGAAAA            CAGGCTGAC GCG GTCAGCCTG            TTTTTTTATGCGGCT 100 18
HCN55_RS06125 NONE
        argJ NONE
        argB 1191373 .. 1191389 +  -5.1  -3.91716   GTCAAAGCAAAGGAG              GCTGTTT CAT GAGCAGC              TTGTTTCAAACCTAC  61 14
HCN55_RS06140 1192523 .. 1192537 +  -3.5  -4.08666   AATCGCTCATCATTC               CGCTG TAAAC CAGTG               ATTTTTTTTCGATAT  57 10
HCN55_RS06145 NONE
HCN55_RS06150 NONE
        argF 1197696 .. 1197716 + -11.2  -5.52384   GGAATCATCAAAAAA            CTGCTGAG CCAAA CTCAGCAG            TTTTTTTGATGGCAA 100 19
HCN55_RS06160 1197979 .. 1198001 + -10.7  -4.92239   GTGACCACTAAAAAA           CCCAAAACA ATAAA TGTTTTGGG           TTTTTGGCTTTTTAA 100 37
HCN55_RS06170 1199197 .. 1199220 +  -8.8  -5.07652   AGAATATAATGACAA          CAGCCTTCTC TTTT GCGGAGGCTG           TTTTGTTTTGGGAAA 100 41
HCN55_RS06175 1199908 .. 1199923 +  -3.2  -3.48981   AAAGGAGTTGAACAT              GACTTG ATCA CAAGGC               TTGTCATGATCTTTT  50 113
         med NONE
HCN55_RS06185 1201077 .. 1201096 + -10.8  -4.18697   ACAGAATAAGAAGAA            GCCACTTT TTTG AAAGTGGC             TTTTCACATGATTTT  90 32
        fabH NONE
        fabF 1203717 .. 1203741 + -17.9  -6.30182   CATAATCAAGCCAAA          CCGGCTGCCCT TAA AGGGTAGCCGG          TTTTTTTTTGTGTGC 100 36
HCN55_RS06205 NONE
        appD NONE
        appF 1206861 .. 1206876 +  -5.4  -4.84359   GATGCTAAGTGTATT              GATGGT TCTG GCCATC               TTTTTATCAGCCTGC  75 154
        appB NONE
        appC 1210571 .. 1210583 +  -3.4  -4.84359   TATCCCTTGCCTATA                CTGT GGACA ACAG                TTTTTATAAAAGTGA  67 192
HCN55_RS06235 1211368 .. 1211387 + -12.2  -5.27477   GTCAACTGAAAAAAA            CCGCTCTT TGCA AAGAGCGG             TTTTTTGATTAGCGT 100 32
        oppA 1214798 .. 1214826 + -13.3   -4.2704   AATAAAAGACCTCAA        GGTATATGGGG AGAAAAG CCCCATATACC        TTTCTTACTGATGGA 100 54
        oppB NONE
        oppC NONE
        oppD NONE
        oppF 1218742 .. 1218767 + -14.9  -5.52909   TTCATGATTCATCAA         TCCTTCAAGAG ATTT CTCTTGAAGGA          TTTTTTTGCGTCTTC 100 34
HCN55_RS06270 1220076 .. 1220092 +  -9.4  -4.25104   ACACTTCAAAATGAA              CGGAGC AGCTG GCTCCG              TTTTGCTGAAAAAAA  86 44
HCN55_RS06275 NONE
         spx 1221389 .. 1221420 + -13.2  -4.60487   AATAGATCGTATCAT      CAAAAGAAGGCTGA GTCA TCAGCCTTCTTTTA       TTTTTCAACCTGCTG 100 39
HCN55_RS06290 NONE
        mecA 1223012 .. 1223033 + -13.1  -5.93809   TTGCATCATAGCAAA           CCGATTTCC TTCC GGAAATCGG            TTTTTTTTATGCACG 100 30
        coiA 1224382 .. 1224393 +    -3  -3.00145   TGAAAGGCACAAAAG                GAAA GGTT TTTC                 GTGTTTTTACTGCTT  43 88
        pepF 1226387 .. 1226411 + -12.9  -5.01732   GTCTTAAAAAAGTAA          GCCTGTGCG GAAATGA CGCACAGGC          TTTTTTAAAACCCTT 100 34
HCN55_RS06340 NONE
        yjbM NONE
HCN55_RS06350 NONE
HCN55_RS06355 1232643 .. 1232665 +   -15  -5.36441   AGCAAACTGATAAAA           GGAGAGAATC ATT GATTCTCTCC           TTTTTTATATGGGGC 100 11
HCN55_RS06365 1235679 .. 1235702 + -11.8  -6.09196   TATGCCAATTCCAAA          CCACTTTTCC TTGC GGGAAAGTGG           TTTTTTTATTTTCAG 100 221
        tenA NONE
        tenI NONE
        thiO NONE
        thiS NONE
        thiG 1239073 .. 1239087 +  -6.4  -2.87132   AACGGCAAGCAGTCC               GGGAGA AGG TCTTCC               TGTATGACAGGCAGG  58 4
HCN55_RS06395 NONE
        thiD 1240934 .. 1240958 +   -13  -4.37711   TAAATACAAGCCGAT          GAGATCACCA GCTGA TGGTGATCTC          TTTTGCGTTTGCTAC 100 24
        fabI 1241864 .. 1241884 + -11.2  -5.82036   CAGGATCTATATCAA            GCAATCCC GAATA GGGATTGC            TTTTTTATTTCTTCT 100 42
        cotO 1242646 .. 1242672 + -10.8  -5.47218   ACGAAAAAGAAAAAA         GCTGCCCGGC TGATGTT GCCGGACAGC         TTTTTTTACATAGAG 100 40
        yjcA 1246015 .. 1246043 +  -9.8  -5.40072   GCCTCAATAGCCTGG       CAAAGAAACCGGA GAAC TCCGGTTT-TTTG        TTTTTTTAACGAGGC 100 225
HCN55_RS06445 NONE
        yjcZ 1246545 .. 1246572 + -18.6  -3.31937   TTTAAGATGTATTGA        GGAAGTACGGGT TATA ACCCGTACTTCC         TTGCCTTGTGTTTAT 100 36
      spoVIF 1246972 .. 1246991 +   -15  -2.50016   TTTTTACAGTAAAAA            CCCGGCAG TAAT CTGCCGGG             CTGTTAATGATGCAA  95 76
HCN55_RS06465 1249650 .. 1249669 +    -5  -5.71712   GATATGTATAAAAAA            CCGTTC ATACCAGA GAACGG             TTTTTTTATATGCAG  88 30
        metI NONE
        metC 1254065 .. 1254087 + -11.3  -5.00467   CGGTTCGTTAAAAAA           GAAGCCGGG GATAG TCCGGCTTC           TTTTATTATTGTTCG 100 30
HCN55_RS06505 1256153 .. 1256169 + -12.3  -5.38497   GAATCATAGCTTAAA              CCCTTGC GCA GCAAGGG              TTTTTTACTTTGCGT 100 33
HCN55_RS06515 1258702 .. 1258749 + -10.6  -5.75945   AAGACGGAAAGCCTG CGGACACTGATCGTTTTACAGA GAAA TTTGTGCTTCGATCGGTGTCCG TTTTTTTTCGCAACT 100 68
HCN55_RS06520 NONE
HCN55_RS06525 NONE
HCN55_RS06530 1259645 .. 1259657 +  -3.3  -3.73647   AAATGGGGGGCAGGA                TCGGC GCG GCGGA                TTATTCCTGCGTCAC  52 40
HCN55_RS06535 NONE
HCN55_RS06540 1260701 .. 1260716 +  -6.8   -5.8187   GATTAAATAATAAGA              GCATCC TGCG GGGTGC               TTTTTTTGTTCCCTG  93 31
HCN55_RS06545 1261437 .. 1261455 +  -3.1  -5.74086   AATATAACTTCTAAA             CCTTCCT ATAAA ATGAAGG             TTTTTTATTTGATTT  84 79
HCN55_RS06550 1261971 .. 1261985 +  -3.6  -4.36089   TTTTCTATTTAATAT               TTTTTG AGA CGAAAA               TGTTTTTTTAAGCTG  63 122
HCN55_RS06555 1262936 .. 1262968 + -12.2  -4.72497   AACTTGAAGCGAAAA     TAAGGTCCCTTCTCT TTTT AGAGG-GGGACCTTA      TTTTATTCATGCATG 100 95
        manR 1265862 .. 1265879 +  -7.7  -5.88565   TTTGGATTATTAAAA             GCAGGGA TTAT TCCTTGC              TTTTTTTGTTATAGG 100 28
        manP NONE
        manA NONE
HCN55_RS06580 1269580 .. 1269606 +   -16  -2.72049   GGTAAATAATCCAAA         CAAAAGCAGGCG CAG TGCCTGCTTTTG         TAATTAAGGACTCTA 100 32
        ybaK 1271472 .. 1271492 +  -6.2  -4.60041   TAGGGGAACGAAAAA            GCTTAGTC ATATC GATTAAGC            TTTTTCCGCATCCCT  76 50
        pdaC 1275823 .. 1275842 + -13.6   -5.5762   AAATAAATTAGAAAA            GGCTGTCC GTAC GGACAGCC             TTTTTTCTATTTAAT 100 35
HCN55_RS06635 1277650 .. 1277668 +  -3.7   -4.8622   TTCTACATGAAAAAA             GCGTCAC ATACA GCGGCGC             TTTTTGATTCCCAAA  69 31
        fdhF NONE
HCN55_RS06655 1282391 .. 1282415 + -13.6  -5.14563   GAGATTGACCTCCCA         CCCGAGC-GGC TTCA GCCAGCTCGGG          TTTTTTGATGAAAAG 100 33
HCN55_RS06660 1283237 .. 1283266 + -14.5  -5.24129   ATGCTAATTTACAGT       TGCACGTTTTTCA TCTG TGGAAAACGTGCA        TTTTTTATAGCGAAA 100 41
HCN55_RS06665 1283931 .. 1283952 + -13.1  -5.34555   TATTTGACTAAAAAA           GAAAGAGCC TGTG GGCTCTTTC            TTTTTTATAATGTAA 100 30
        yjiB NONE
HCN55_RS06680 1287029 .. 1287049 + -12.7  -4.80455   GTAAAAACATAAAAA            CCGAAATCA ATT TGATTTCGG            TTTTCTGTTTAAATA 100 37
HCN55_RS06690 1288245 .. 1288268 + -13.2  -4.64591   TAACAAGTACAAAAA          GCCGCTTTTC CCTC GGAAAGCGGC           TTTTGTCTGTCATTC 100 38
HCN55_RS06710 1291690 .. 1291702 +    -2  -4.52502   AGAGAGTAAAGGATT                TTGA CTTAT TCAA                TTGTTTATTTTTAGA  58 210
HCN55_RS06715 NONE
HCN55_RS06720 1293551 .. 1293595 + -13.9  -5.90231   CCTTTTAATGAATCT GGCATTGCCA-AAAGCATTC CTTTCC GAGTGCTTTCTGGCAATGTC TTTTTTTATGTTTAT 100 42
        uxaC NONE
HCN55_RS06730 1296618 .. 1296628 +  -2.6  -2.95102   ATATAATATAAAGAA                 TATT TAA AATA                 ATTTGTAAATAAAAT  43 43
        allD NONE
HCN55_RS06740 NONE
        uxuA NONE
HCN55_RS06750 NONE
HCN55_RS06755 NONE
HCN55_RS06760 1303086 .. 1303106 +    -4  -4.06419   CGATTGACGACGTGA           TGTCCCGTT TTTC AGCGGG-CA            TTCTTTATACAGAAA  58 26
HCN55_RS06765 NONE
HCN55_RS06770 1306103 .. 1306125 +  -9.2  -3.82604   GTTATAATAAGAAAA           GGCTATCC TTCAAGC GGATAGCC           TTCTTCATTAAATCA  83 34
        yjoB 1309013 .. 1309037 + -12.9   -5.4756   TTTCACTAAAAGAAA          GCACGGGTGTT TGA AAAACCCGTGC          TTTTTTGTTGCGGTT 100 32
        rapA NONE
        phrA 1310424 .. 1310437 +  -8.1  -5.80003   TGATGCATAAAAAAA               GACCC TTAG GGGTC                TTTTTTATTTCTTCA 100 38
HCN55_RS06805 1311781 .. 1311804 + -15.4  -4.19953   AGCTGTAAATGAAAA          GACGGAAGCT GTGA AGCTTCCGTC           TTTTCGCCTTACATA 100 33
HCN55_RS06815 1312875 .. 1312886 +  -2.2  -4.42386   CGATATGTGGAAGCC                GTCA AGCT TGGC                 TTTTATACATAAAAC  58 2
HCN55_RS06820 1313821 .. 1313847 + -14.5  -3.46088   TGTTAGGTTCTCTTC         TGGGCTGAGGA ATATA TCCTCAGCCCG         TATTTGATCAGATGT 100 35
HCN55_RS06835 NONE
HCN55_RS06840 NONE
HCN55_RS06845 NONE
HCN55_RS06850 NONE
        xkdD NONE
        xtrA 1317676 .. 1317721 + -19.3  -5.63517   AAGACGGAAAGCCTG CGGACACTGATCAACTGCACAG CAT TTGTGC-GTTGATTGGTGTCCG TTTTTTATTTGCCAA 100 61
HCN55_RS06865 1318315 .. 1318334 + -11.4  -4.42386   AGAGCATGACACTAA            GCGGCTGG CTGA TCAGCCGC             TTTTATGAATAAACA  95 75
HCN55_RS06870 NONE
HCN55_RS06875 NONE
HCN55_RS06880 NONE
HCN55_RS06885 NONE
HCN55_RS06890 NONE
HCN55_RS06895 NONE
HCN55_RS06900 NONE
HCN55_RS06905 NONE
HCN55_RS06910 NONE
HCN55_RS06915 NONE
HCN55_RS06920 NONE
HCN55_RS06925 1327556 .. 1327578 +   -15  -5.03314   GAATCAGCCCATACG           CAGACCTTTC TCA GAAAGGTCTG           TTTTTTAAAGATGAA 100 49
HCN55_RS06930 NONE
HCN55_RS06935 NONE
HCN55_RS06940 NONE
HCN55_RS06945 NONE
HCN55_RS06950 NONE
HCN55_RS06955 1334166 .. 1334184 +  -4.5  -5.28942   TAAGGTATAGACAAA             CCGCTTC AGTAC GAAGGGG             TTTTTATTTAGCATG  81 31
HCN55_RS06960 NONE
HCN55_RS06965 NONE
HCN55_RS06970 NONE
HCN55_RS06975 NONE
HCN55_RS06980 NONE
HCN55_RS06985 NONE
HCN55_RS06990 NONE
        xepA 1339974 .. 1339987 +  -3.8  -2.65815   CATAATAGTCTCGGC               CCTC GGAAGG GAGG                TGATCTGCATGTGAA  45 36
HCN55_RS07000 NONE
HCN55_RS07005 NONE
HCN55_RS07010 1341480 .. 1341506 + -13.8  -5.64873   TGATCAAAGACCATA         AAAATCCCGGAG CCG CTCCGGGATTTA         TTTTTTCTTCTTCAA 100 38
HCN55_RS07045 1347330 .. 1347352 +   -17  -5.80364   AATTGTGATTCTTTT           GCCTTCCGGC GCC GCCGGAGGGC           TTTTTTTATTACCAT 100 40
HCN55_RS07050 NONE
HCN55_RS07055 NONE
HCN55_RS07060 1350711 .. 1350735 + -17.9  -4.95155   TGTCATAACCTCAAA          CCCCCTGTCCG TAA TGGACAGGGGG          TTTTTATGCTCTGAG 100 33
HCN55_RS07075 1353556 .. 1353575 +  -7.2  -5.64274   TTGGTAAACAAACAT            GAATCCTT GAAA GAGGATTC             TTTTTTTATCACTGA 100 24
        dppA 1354489 .. 1354500 +  -4.4  -2.64099   CATGACTGAGCTTGC                GATG CGGA CATC                 ATTCTGCTAAAGGGG  47 4
        dppB NONE
        dppC NONE
        dppD NONE
        dppE 1359104 .. 1359131 +  -7.8  -5.61913   AGGCGATTGAGGAAA        TACTGCTTCTTT ATGC GAAGGAGCGGTA         TTTTTTCTCTTTCTT 100 44
HCN55_RS07105 NONE
HCN55_RS07110 NONE
        eepC 1362091 .. 1362103 +  -3.3  -4.59773   AAAAAGAATTATGTG                CGGTG CGC CGCTG                TTTTTCAGAATAAGG  64 0
HCN55_RS07120 1363126 .. 1363153 +  -8.5  -2.60809   TAAGATAAATAAAAA        GAGTGGCTC CTTTTTACTA GAGCCACTC         CATTTGTTTATACTT  65 33
HCN55_RS07135 1365847 .. 1365869 + -10.7  -5.77632   TTGGTGAACGTTAAA           CCCAAAACA TAAGT TGTTTTGGG           TTTTTTTGTACTTTT 100 34
        hmpA 1367291 .. 1367312 +  -8.8  -5.46657   AACACATACATGAAA           CTCTTCTC CTTTCA GAGAAGAG            TTTTTTATTGAGATA 100 40
HCN55_RS07150 1368458 .. 1368478 +    -4  -6.04324   ATAACAATTAAGATG            GCTCTC TCTTGTAAT GAGAGC            TTTTTTCTTTTTTAA  93 30
HCN55_RS07155 NONE
HCN55_RS07160 1369715 .. 1369753 +  -6.7  -6.09196   ACGGAGGGAAAAAAG  CCCGGGAGAGTCAATCTC ATGT GAGAC-GACTGTCCGGGG   TTTTTTTGTTTTCGG 100 160
        ykkC NONE
        ykkD 1370461 .. 1370475 +  -2.9  -3.14647   ATTCTGTCATAAATT               GATTT TTATC AAATC               TTCAGTATAATGGAT  45 29
        purU 1371712 .. 1371745 + -13.3  -5.88565   GTGGTACCACGGAAA     CCCATTTCGTCCTTA TGAA TCAGGATGAAATGGG      TTTTTTTATTGTAGA 100 307
        proB NONE
        proA 1374160 .. 1374182 + -10.7  -5.24129   ATGTTCAATGAAAAA           GCTTATCTC ATTAC GAGATAAGC           TTTTTTATACGCGAA 100 48
HCN55_RS07190 1374694 .. 1374722 +  -7.4  -5.52986   TGCTGAATAAATAAA        AAGAGGATGCCT GTACA AGGCATCCTCAA        TTTTTTTGATGAAGT 100 31
HCN55_RS07200 1375723 .. 1375744 + -13.1  -5.21709   TAAAATAATGACCGG           CATCCTGAG GATT CTCAGGATG            TTTTTTGGTGTCGGA 100 33
HCN55_RS07205 1375935 .. 1375959 +  -7.1  -4.52347   TTGGAGAAATAACAA          GGACCAGGC CGCGCAT GCCTGATCC          TTTTAATATTCTTTC  79 48
       rsbRB 1381330 .. 1381350 + -14.1  -5.31275   TCATCAATAAAAAAA            TCCGCTATC TGT GATAGCGGA            TTTTTTATGATGCGA 100 31
        ykoG NONE
        ykoH NONE
HCN55_RS07260 NONE
HCN55_RS07265 1388580 .. 1388597 + -14.1  -4.77036   GATGACTAATCAAAA             CCCCCGC TGCA GCGGGGG              TTTTTCATGATAAGA 100 32
HCN55_RS07270 1388786 .. 1388813 + -11.4  -3.15231   ACGAGACACAAACAA        CAGAATAAGGGC TTAG GCCCTTGTTTTG         TTCCGTAATTGTGAT  84 18
        mgtE 1390663 .. 1390686 +  -8.1  -5.00196   TTATAAACGTAAAAA          GTCCGTCTC AACTGC GAGCCGGAC           TTTTATTATTTAACG  95 35
HCN55_RS07285 NONE
        ykoL 1391633 .. 1391658 +  -9.2  -5.79588   AAATCATAAAAATTA         TCCTTATACA AGATAA TGTATAAGGA          TTTTTTTGCTTTTAG 100 10
HCN55_RS07295 1392254 .. 1392275 +  -6.6  -5.96894   TCGTTAACTATTCTA           CACTCTCT ATTTCA GGAGAGTG            TTTTTTTGTTTCCAT 100 34
HCN55_RS07305 1394019 .. 1394043 +  -2.2  -5.28481   ACCTATCAAAAAAAA         GACTGATGC CTCGGTCA GCA-CAGTC          TTTTTTGATTAAATC  73 20
HCN55_RS07315 NONE
HCN55_RS07320 1397787 .. 1397809 + -12.1  -5.08601   AGTTAAACACGGAAA           GAGCTGACT TCATT AGTCAGCTC           TTTTTCTTCAACTGA 100 35
HCN55_RS07340 1403871 .. 1403881 +  -6.8  -3.41325   ACGTTGACAAATCAC                 TGCG CTG CGCA                 TATTATTGACGTATA  62 34
HCN55_RS07345 1404921 .. 1404942 + -13.1  -5.19879   GGGCGTAATCTGAAA           GACTCTGCT TAAA AGCAGAGTC            TTTTTGTGTTTGAAG 100 33
        sigI NONE
        rsgI 1407535 .. 1407557 +  -9.8  -3.03771   TCAGTTCTTCAAAAC           GGTGACGGAG ACG CTCTGTCTCC           TGTTCGGCGATCTCC  71 486
        htpX 1409194 .. 1409215 + -13.1  -5.86976   TACAAACACATTGTT           CCTCTGAGA GAAT TCTCAGAGG            TTTTTTATTTTATCC 100 41
        ktrD 1410708 .. 1410726 + -10.3  -5.26875   ATCGGATAGGCAAAA             CACCGCA TATTT TGCGGTG             TTTTTTGATTACCAA 100 32
HCN55_RS07380 NONE
HCN55_RS07385 1411185 .. 1411216 + -13.8  -3.75763   AACAACAATAAAAAA      GACCTCTTAGGCGG CGTC CCGCTTAAGAGGTG       CTTTTTCTATTTTAA 100 30
        kinE NONE
         ogt NONE
HCN55_RS07405 1415417 .. 1415452 +  -8.3  -5.14965   AAAGAAACAAAAAAA    CCGCT-GACTCGGCTC CAAAT GAGCAAAGTCCAGCGG    TTTTTTAATGCACCT 100 19
        mtnE 1420279 .. 1420309 +  -7.7  -5.22312   GGACGAGAAACGAAA      CCTCTTTAGAC-GC GATT GCAGTTTGAAGAGG       TTTTTTGATATGGAT  93 182
        mtnW NONE
        mtnX NONE
HCN55_RS07440 1422833 .. 1422846 +  -2.3  -3.05384   GAAATTGAAAACACT               CGAGC ATCA GCTGG                TTAAATAAAAGGAGG  42 4
        mtnD 1423416 .. 1423436 + -16.9  -5.28414   AATAAGCGTGAGATA            GCCCCGTTC ATC GAACGGGGC            TTTTTATATTTATTG 100 36
       spo0E 1424253 .. 1424273 +  -6.1  -5.60993   ATGCATATATAAAGA            GAGAGCTTT TCG GAAGCGCTC            TTTTTTTCTGGAAAA  91 52
HCN55_RS07460 1424747 .. 1424771 + -12.1  -2.79183   TCACGAAGATAAAAA          ACCCTCCTGAC ATG GTCAGGGGGGC          TATGATGCGGATACG  84 29
        mhqR 1426927 .. 1426953 +  -5.2  -5.38348   TAATAAGTAAAAAAA         GGAAGCCT GATATGTCACA AGGCTTCC         TTTTTTGCTATTTTT  84 31
HCN55_RS07490 1432603 .. 1432624 +  -5.1  -5.69068   AAAAAACTAAGGACG           AGCTGTATC CTTG GATACGGCC            TTTTTTATGTTTTTC  88 208
        queC NONE
        queD NONE
        queE NONE
        queF 1435328 .. 1435346 +  -9.6  -5.49579   ACAGAAGCAGATTAA             GGCGTACA ATT TGTACGTC             TTTTCTTTTTTATCC 100 280
HCN55_RS07520 1436972 .. 1437016 +  -8.1  -3.52506   CTTGAAGAAGTCGTA TAAAAAAGTCGTTTTCCTT AAAGGAC AGGGAATTCGACTTTTTTA TATTTGAATTTGATT  72 94
        ykvP NONE
HCN55_RS07530 1439162 .. 1439172 +  -5.4  -4.18018   ACGATTTGCATTAAT                 GAAC CGA GTTC                 TTTTAGCTAAACAAA  65 361
HCN55_RS07540 1440814 .. 1440832 +  -7.4  -5.36441   GGAAATAGACAAAAA             CGCCGATT CAT GATCGGTG             TTTTTTATGTAAAAA  95 13
HCN55_RS07550 1441494 .. 1441515 +  -9.5  -4.96762   AGCCAAGAAGCTGAA           GGTTTCTCA TACG TGAGAAGCC            TTTTTATCATATATG 100 27
HCN55_RS07555 1442418 .. 1442448 +    -9  -5.58454   GTTTTTGCCGTCTAA       GCATAGAAGAGACA ATT TGTCTCAGCTGTGC       TTTTTTTCATATAAA 100 26
        ykvU NONE
        stoA 1444420 .. 1444441 + -10.2  -5.21709   ATGGACGGAAGAATA           GCTGAGAG CATAGA CTCTCAGC            TTTTTTCATATAGAG 100 25
        pfeT 1446571 .. 1446596 + -13.3  -5.03994   GACTCCTAAAATAAA         ACCAGCAGCCT AATC AGGCTGCTGGC          TTTTTATGTATCAAG 100 27
        papB 1448081 .. 1448103 +  -2.6  -5.38951   AATAGAAATAAAAAA           GGACTTTGTT CTC GACATCGTCC           TTTTTTATCTGCATT  74 39
HCN55_RS07585 1449295 .. 1449306 +  -4.4  -2.67667   TGGATTACCGTCTCA                TCGA AAGA TCGA                 CTGTTTAGTGAATGC  47 6
        glcT 1450307 .. 1450323 +  -4.4  -4.17048   ATTGAGGGAAAAAAA              CGGGAA GTTCA TTCTCG              TTCTTTTGCGCACCC  61 89
        ptsG 1452585 .. 1452610 + -14.1  -3.58365   AAGGGTGTTAGTACG         CCGTGCTTGTC AGAT GACAAGTACGG          TTGTATGATATAATA 100 39
HCN55_RS07600 NONE
        ptsP 1454658 .. 1454681 + -13.2  -5.53991   AGTAATGTACAAAAA          CCAGAC-GGCC TCC GGCCTGTCTGG          TTTTTTTCATAAGTA 100 36
        splA NONE
        splB 1456084 .. 1456109 +  -9.7  -5.24129   GAATATTTCACTTAA         ACGGGCTGTTG TGAT CAACAGCTCGC          TTTTTTATAAAAAAC 100 26
HCN55_RS07625 1458891 .. 1458916 +    -7  -5.86976   TGTAATCCAATTACA         TCCCCAA-ACA TCATT TGTTTTGGGGA         TTTTTTATTTTATAA 100 36
HCN55_RS07630 1459890 .. 1459914 +   -13  -6.04419   GGTGAAATAAAAAAA          GATTGCCTGT ACGAA ACAGGCAATC          TTTTTTTATTATTTT 100 31
HCN55_RS07640 1463154 .. 1463181 +  -7.8  -4.87892   AAAAAATAAAAAACA        GGGTGCACAA-CT AAA AGATTGTGTGCCC        TTTCTTTTATTCAAA  88 32
        kinA 1465135 .. 1465154 +  -9.3  -4.02736   CCAAAAAAATAAAAA            CAACGGC TTAAAC GCCGTTG             TTTATCGTCTGCATT  85 29
HCN55_RS07660 1467809 .. 1467836 +  -9.2  -5.45802   TTGAATAAATAAAAA        CAGCCGTTGCC AGAAAGA GGC-ACGGCTG        TTTTTATTTTAAAAG 100 33
HCN55_RS07685 NONE
HCN55_RS07690 NONE
HCN55_RS07695 1474741 .. 1474781 +  -9.1  -4.81359   TATCTGAATAAACTG  CAAAACAAGCGAACGTTAA AAC TGGTCGTTCGCTTGTTTTA  TTTTCTATTTAAATT 100 30
HCN55_RS07700 1475362 .. 1475372 +    -4  -3.34522   TATTGTGAAACAAAT                 GAAT AAA ATTC                 TTAATTAACCAGTAT  50 7
HCN55_RS07705 1476900 .. 1476920 +  -8.3  -5.72622   CAAGATCCGAAAAAA            CTTGGCG CTACCCC CGCCAAG            TTTTTTATTTGTCAA 100 169
HCN55_RS07710 1477655 .. 1477673 +  -4.5  -3.54741   AAGATTCCTGAAATA             GGGGGAA CAAGC TTCCGCC             TTTGCAAAAGTAATC  55 39
HCN55_RS07715 1478354 .. 1478367 +  -3.1  -3.57615   GCGGTAGAGCTGAAA               GTAAG TTGT CTTGC                TTTCAGAGGTATTCA  50 110
        abbA 1478618 .. 1478637 +  -6.5   -5.4505   GGACACCCTATAATT            GATACTC CACAAA GAGTATC             TTTTTTATTGAAAGG  93 43
HCN55_RS07725 NONE
        ccpC 1480213 .. 1480229 +  -8.7  -6.28967   AAAATCCATTTTAAA              GACAGCG AGG TGCTGTC              TTTTTTTTATTTATC 100 27
HCN55_RS07735 1480775 .. 1480791 +  -2.2  -3.72576   GGCAGATTATATGAA              CAAGGA AAAAA TCCATG              TTTCATAAAGGGGCA  49 1
HCN55_RS07740 NONE
HCN55_RS07745 1482164 .. 1482186 +  -5.5  -5.94214   TCTGATCACTCACTG           GGAACTGCT AAAAC GGCTGTTCC           TTTTTTTCTTGTCTT  91 36
        dapD 1482988 .. 1483010 + -16.4   -3.7732   AAGTTTGATAAAAAA           GGCGTGGATA ATA TATCCACGCC           TTATTCGTATAGGCA 100 45
HCN55_RS07755 NONE
HCN55_RS07760 1484470 .. 1484504 + -13.1  -4.55908   AGCAGAATTCAGTAA     TAAAAAAACCGAAGC AAAAA GCTTCGGTTCTTTTA     TTTATTCTGTTTCTT 100 26
HCN55_RS07770 1486110 .. 1486131 +  -4.4  -3.41366   CCAAGAACGAAAAGC           GGTCTAGC ATATTC GTTAGGCC            TCTCTTTTAAAATAG  53 47
        ykuV 1486636 .. 1486650 +  -5.7  -5.72622   AGTATTTCCTAAAAA               CCTGA CCTCA TCAGG               TTTTTTATTTGTGCA  88 55
         rok 1487661 .. 1487682 +  -9.5  -5.80364   AAATATAAAGAAAAA           CTGCTTG-GC ATC GCTCAAGCAG           TTTTTTTATTGAGGT 100 39
HCN55_RS07790 NONE
HCN55_RS07795 NONE
HCN55_RS07800 NONE
        mobB NONE
HCN55_RS07810 NONE
        moaD 1492954 .. 1492977 + -15.3  -5.14985   AGCGGGGGATGAAAA          CCGGACGGC ATTTCA GCCGTCCGG           TTTTTCTGTATTTCA 100 29
HCN55_RS07820 NONE
HCN55_RS07825 1496767 .. 1496782 +  -7.6   -4.6526   GAATAATATGAAAAG              CCTTCA ATAT TGAAGG               TTTTTGGAAATTTAT  84 35
        yknW NONE
HCN55_RS07835 NONE
        yknY NONE
        skiZ 1500584 .. 1500604 + -14.1  -5.88197   CTGCGTTATGAGTAG            CCTCATGCA ACA TGCATGAGG            TTTTTTTATGTTTAG 100 26
HCN55_RS07850 NONE
        pfkB NONE
HCN55_RS07860 1504457 .. 1504479 +  -9.2  -5.18726   AAAATAAGAAAAAAA           GCGTCCTT GGTTCGA AAGGACGC           TTTTTCTTATCCGGC 100 34
        lepB 1505178 .. 1505204 +  -8.7  -5.45802   CAAACAAAATAAAAA        CGCCTTGCTGGC CTAG GACAGCA-GGCG         TTTTTATTTTGAAAA 100 29
HCN55_RS07875 1507285 .. 1507300 +    -9  -5.53991   ACGCCGAATAAAAAA              GCAGAG ATTT CTCTGC               TTTTTTTGATACCTA 100 30
HCN55_RS07880 1508254 .. 1508271 +  -8.4  -4.99947   AGAAAAATAAAAAAA             GGAGGC GGAAAA GCCTCC              TTTTATTTACTTAAA  95 31
        abhA 1511444 .. 1511466 +  -9.9  -5.08824   AATTATGCTAAAAAA          GGCGGAG-TG ATAT CATCTCCGCC           TTTTTTGCGTGCCAA 100 41
        kinC NONE
HCN55_RS07910 1513782 .. 1513793 +    -3  -2.85351   GAATATGATAAAATT                TGAT CAAT ATCA                 TGTCATATAAAGGAG  42 54
        ktrC 1514494 .. 1514510 + -10.1  -4.90906   TAGCAGCCAAATAAG              CCGTCCT CAA AGGGCGG              TTTTTCATATTATCA 100 38
         ade 1516374 .. 1516398 + -20.1  -6.34424   CACTGCAATAAAAAA          GAGGCACTCCC TTA GGGAGTGCCTC          TTTTTTTTTTAAACC 100 30
HCN55_RS07935 1519454 .. 1519474 + -16.9  -4.89567   TTTAAAATAAAGAAA            CGGCTGGCA TTG TGCCAGCCG            TTTTCTCTTTTAGCG 100 31
HCN55_RS07950 1521185 .. 1521203 +  -8.9  -5.47218   CTATCGTGTGAAAAA             GAGCTGA CTCGA TCAGCTC             TTTTTTTGAATGAAA 100 19
        pdhA NONE
        pdhB 1523729 .. 1523752 +  -8.2  -3.41569   AAACTGCATAATCGA          GAGGGAAGAT GAAC GTTTTCCCTC           TATTATATATCTGTT  70 43
        pdhC NONE
        lpdA 1526587 .. 1526610 + -13.2  -6.09196   TTTTCATATCAAAAA          CAGCCC-CGCT TTG AGCGAGGGCTG          TTTTTTTATTTTGAC 100 41
HCN55_RS07980 1527537 .. 1527559 + -17.8  -5.89659   AGAGTAAAAAAAAAA           GCATGCGGCT TAA AGCCGCATGC           TTTTTATTTTTTTAT 100 34
HCN55_RS07990 1529491 .. 1529532 + -15.3  -3.85785   CGCGAAGATTAAGAT GTAAGAAAAAGAGCCGGGG GATA TCCCGGCTCTTTTTTATGC  TTGTGTTACTTTTTG 100 22
HCN55_RS08000 1530612 .. 1530631 +  -5.7  -4.65895   AAGCGATAGTGAAAA            CGAACCG CATGAA TGGTTCG             TTTTTACGTGAGAAG  73 44
HCN55_RS08005 1531517 .. 1531547 +  -2.5  -2.65538   ATTTGAAGAGTATCT       TCATGCTCGGAAG TAGGC CATTTGAGCAGGA       TGATCTCAGCTTGTT  41 10
HCN55_RS08010 1532026 .. 1532046 + -14.1  -3.49924   CGGGTTCAATAAAAA            GCCTCTCAA ACA TTGAGAGGC            TTCTGATGATTTGAA 100 65
HCN55_RS08025 NONE
HCN55_RS08030 NONE
HCN55_RS08035 NONE
        sigQ 1538196 .. 1538220 + -12.2  -5.15969   GCTGATATAAAAAAA         GCGCTTGTCCG ATTC CGG-CAAGCGC          TTTTTTACATTAAGC 100 31
        typA NONE
HCN55_RS08060 1541623 .. 1541657 + -17.4  -3.39727   GACAGTCTGCAAAAT     CATAAAAGACTCAGCT GAA AGCTGAGTCTTTTTTG     TGTTCTGTATGGTTA 100 21
HCN55_RS08075 1544064 .. 1544076 +  -7.7   -2.8978   AGATCAGGTCTCGCC                CAGCT TGC AGCTG                ATTTGCTGTAACACT  64 2
        glsA NONE
HCN55_RS08090 1545997 .. 1546019 +  -4.2  -5.60993   AAATAAATGATAAAA           CTCAAACT TATTAAC AGTTTGGG           TTTTTTTATAACCGC  86 35
        ftsW 1547421 .. 1547437 +  -2.2  -2.84173   AAACAAGTGTGTACA              GGGGAA GGATA TTCCGC              TATGATAGATTATAT  41 42
         pyc 1550932 .. 1550962 + -12.8  -5.71712   AAAGCATAAAAAAAC       AAAGAGTGTATATC AAT GATATACACTCTTG       TTTTTTTATATAGAA 100 32
HCN55_RS08110 1553637 .. 1553652 +  -3.3  -2.90496   ACATAGATGGCATTT              TGAGT AAAAAA ACTCA               TAATTTAAGAGAAGA  44 140
        coxB NONE
        ctaD NONE
HCN55_RS08125 NONE
        ctaF NONE
        ctaG 1558614 .. 1558636 +  -9.9  -4.47271   GACGATATCATAAAA           GGTACAGCG AAATA TGCTGTACC           TTTTCGTTACATTTG  91 28
HCN55_RS08145 1559656 .. 1559670 +  -3.5  -2.53015   ACAAGAGATTGTGAA               TCGCC ACGGG GGTGA               TAGATTGAAAAATAT  43 90
HCN55_RS08150 1560721 .. 1560743 +  -6.9  -5.20783   GCGATGGTAATGAAA           GCCGCGGAC GAATG GTTCCCGGC           TTTTTCTATTTCCAT  90 31
HCN55_RS08155 NONE
HCN55_RS08160 1561603 .. 1561619 +  -2.9  -5.15634   GACAAAAGATTAAAA              GGCCC CGAAGAA GGGTC              TTTTTTCATGCGGTC  70 28
        ricF 1562164 .. 1562184 + -11.2   -4.2349   GATGTAAAGTGTCCT            GACGAGAC TGGCC GTCTCGTC            TTTTACATATAAGAG  90 24
HCN55_RS08170 1562505 .. 1562524 +   -15  -2.96822   TAGCTATAAAAAAAT            CCCCGCAG GCAT CTGCGGGG             TCCTTCTATTCCTTA 100 38
        rsmD NONE
        coaD 1563854 .. 1563875 +  -5.9  -5.83226   CAAAAATTCAGACAA           GGATGAG GGTTTTGA CTCATCC            TTTTTTTGTTCCGTT  93 20
HCN55_RS08190 1566045 .. 1566056 +  -2.2  -2.97667   AAAGAAATAGAGAAT                TGGG AGGG CTCA                 TAATTTGCTACGTAA  42 11
HCN55_RS08195 1567079 .. 1567097 + -13.2  -5.01546   AGCTGAAAGCGAAAA             GCACCTGA TTC TCAGGTGC             TTTTTCTATACATTT 100 18
HCN55_RS08210 NONE
        rpmF 1569281 .. 1569315 + -14.5  -5.13344   TAAAAAGTAACTAAT    GAGAAAAGCGCAGGGT GAAA GCCCTGCGCTTTT-TC     TTTTTCTCTTCCTGT 100 27
        gerR 1570025 .. 1570050 +  -5.5  -4.40882   AACGCCTGAAATGAA         CCGGCCCTAT AGTAAGA ATA-GGCCGG         TTGTTTTGATTTCTA  70 44
HCN55_RS08230 NONE
        bshC 1573309 .. 1573325 +    -8  -6.24157   TAAAGTTTTAAAGAA              CCCTGA CTAGT TCAGGG              TTTTTTTTTATGGGT 100 43
        mraZ NONE
        rsmH NONE
        ftsL NONE
HCN55_RS08255 1577397 .. 1577421 +  -4.9  -5.66684   AATCCTGATTAAAAA          GAAAGCCGTCG TTA TGCAGGCTTTC          TTTTTTTATGCCTTC  88 29
HCN55_RS08260 1579438 .. 1579461 +  -8.9   -3.8165   AGAAGATGAAAAGGA          GGCAG-CCGA TTGAT TCGGGCTGCC          TATTCTTTTATTGCA  78 13
HCN55_RS08265 NONE
HCN55_RS08270 NONE
HCN55_RS08275 NONE
       spoVE 1584766 .. 1584797 + -13.2   -3.7511   TGGAAACAATTGATG      CGATAACCCTGT CCAACAAA ACAGGGTTATCG       TTATGTTATAGAGAA 100 78
        murG NONE
        murB 1586919 .. 1586944 +   -12  -4.13767   ACTGTAAGCAAACGA         CAAACGGCAT CATAGT ATGCCGTTTG          TTTTGGAATAGACAG  93 74
       divIB NONE
HCN55_RS08300 NONE
HCN55_RS08305 NONE
HCN55_RS08310 NONE
        ftsA NONE
        ftsZ 1592283 .. 1592308 + -14.9  -5.98675   CGCGGCTAATGTAAA         GGACAAAATCG TTTT CGATTTTGTCC          TTTTTTGTTTTTCTC 100 32
HCN55_RS08325 1596892 .. 1596909 +  -9.1  -5.74122   TTAAGTGGAAAAAAA             GCTGCCG TCAT TGGCAGC              TTTTTTTATATCCTC 100 37
     spoIIGA NONE
        sigE 1598818 .. 1598830 +  -5.5   -2.7641   AACCCCTTGATTTTA                CAGGG ATT TCCTG                ATTTCGACAGTTTTT  52 57
        sigG 1599710 .. 1599747 + -18.1  -3.30039   ATATTCATCAATAAT   GAAAAGCCTTTAAAACG ATGT TGTTTTAAAGGCTTTTC    TATTGATTATGGATG 100 27
HCN55_RS08345 1600760 .. 1600778 +  -8.8  -5.05606   GGAAGCGGTGAAAAG             CGGAGTAC ATC GGACTCCG             TTTGTTTTTATTAAG 100 135
HCN55_RS08350 NONE
HCN55_RS08355 1602576 .. 1602589 +  -2.3  -5.18561   GATGTGGTAAAATAA               GTGGG AAAT TCCGC                TTTTTTAAATGTTTG  69 141
        pgeF NONE
HCN55_RS08365 NONE
HCN55_RS08370 1604605 .. 1604630 +    -2  -2.83103   GACGAACATCAGAGG         TGGTAAAGCGA GATGA TC-CTTTATCA         AGTTTTTTCGGTTTT  41 20
HCN55_RS08375 1604905 .. 1604928 + -14.6  -3.64703   TGTGACAGTTTGATA          GGGGCTTGGC AGCA GCCAAGCCTC           TTTACATAGAAGGGA 100 41
HCN55_RS08380 1605712 .. 1605726 +  -4.2  -3.55072   AGAGTTACGTTTGAA               CGACAA AAA TAGTCG               GTTTTTCAGTTTTTT  55 14
      divIVA 1606584 .. 1606613 + -12.9  -6.14618   GGTACCGCGAGATAA       GCTTTCTCGTCCC TTAT GGGATGAGAGGGC        TTTTTTTATTTTCTG 100 298
        ileS 1609428 .. 1609447 + -12.1  -5.60993   AAATAATGCAAAAGA            GCCCGGC GTAAAA GCCGGGC             TTTTTTTGTGCCAAG 100 35
        ylyA 1609916 .. 1609950 +  -8.6  -2.56728   AACGGATATCGAATA     TGGTCAGGCACTGT ATGAATA ACAGTGTCTGTCCG     GTTAATATGCCTGAT  68 4
        lspA NONE
HCN55_RS08405 1611540 .. 1611564 +  -8.6  -5.62045   CACCTTGTCCTAAAA         CCCCTCTATGC TCTG GCA-GGAGGGG          TTTTTTCTTCTATAT 100 148
        pyrR 1612232 .. 1612257 + -10.5    -5.626   GCAGGTCTTTGTATG         CCTCTTTGCGT AAAA AAGCAAAGAGG          TTTTTTTATACAGTC 100 112
HCN55_RS08415 1613708 .. 1613731 + -11.8  -5.77853   CTCTATTTAACCATA          CCCCGAGTCTA TCT TAGAC-CGGGG          TTTTTTTTCAGCCTT 100 107
HCN55_RS08420 NONE
HCN55_RS08425 NONE
        carA NONE
        carB NONE
        pyrK NONE
HCN55_RS08445 NONE
        pyrF NONE
HCN55_RS08455 1623320 .. 1623335 +  -6.8  -5.84381   TGCTGTACTTGAAAA              CAGGCT GTGA GGCCTG               TTTTTTTATTAATCC  93 79
HCN55_RS08460 NONE
        cysP NONE
         sat NONE
        cysC NONE
        cobA NONE
HCN55_RS08485 NONE
HCN55_RS08490 1629388 .. 1629411 + -15.4  -4.99043   AGAAGAAAGAAATAA          GCCAGAGCAT ACAA ATGCTCTGGC           TTTTCTTTATGCGGC 100 26
HCN55_RS08500 1633955 .. 1633977 +  -8.5  -4.77165   ATGATATAATCTTAG           GGGTAATAG CGTGT CTATTGCCC           TTTTATTATGAGAAC  95 47
HCN55_RS08505 1634934 .. 1634945 +    -3  -4.07568   CTTACTAGGCTAAAC                TAGA GACG TCTA                 TTTTACAGGGGGAAC  55 68
        remA NONE
         gmk 1635852 .. 1635863 +    -3  -3.09878   AGAAAATGCTGGAGG                TTGA ATAA TCAA                 TGTTAGATCCGTCAA  43 18
HCN55_RS08520 1636076 .. 1636102 +  -9.6  -5.47218   GAATAGTAGCACAAG         TAGCAACCTATA TCA TGTAGGTTGTTA         TTTTTTTCCGTGCGG 100 35
       coaBC NONE
        priA NONE
HCN55_RS08535 NONE
HCN55_RS08540 NONE
        rsmB NONE
        rlmN NONE
        prpC NONE
        prkC 1646398 .. 1646413 +  -3.2  -2.77013   AACAAGGAGGGAAAA              TATGCC TGAG GGCAAA               ATTATTAAGGCGCTA  44 39
        rsgA NONE
HCN55_RS08570 1647968 .. 1647994 +  -3.1  -4.84527   AGCAGCTTTAGAAAA        GAGC-TGGGCATA CAA TA-GCCTAAGCTC        TTTTTCCTGTATGCA  67 40
HCN55_RS08575 NONE
HCN55_RS08580 1648861 .. 1648885 + -12.8  -3.85542   TTCACCACATAAAAA          CGCCTGCCAC ATATC GGGGCAGGCG          TTCATTTTGTTATAC  95 64
HCN55_RS08590 NONE
HCN55_RS08595 1651394 .. 1651422 + -19.1  -3.68394   TATATAGTTTCAGCA        GAATAGAAGGGCA ATT TGCCCTTCTATTC        TTATGTCTGCTTTTA 100 20
       sdaAB NONE
       sdaAA NONE
        recG NONE
        fapR NONE
        plsX NONE
        fabD NONE
        fabG NONE
        acpP 1658896 .. 1658907 +  -7.2  -4.25458   TCCCGCCGAAACGCG                GGGC TTTA GCCC                 TTTATTCGTGCAGTT  75 55
        rncS 1659758 .. 1659779 +  -8.7  -3.75535   TACGAAACAATAAAA           TCCCCCTTA TGAC TCAGGGGGA            TTTCAGTATGTATGC  78 28
         smc NONE
        ftsY 1664417 .. 1664466 + -14.5  -3.83844   TTAGTGGAAAAAGCC GACGATTAAGAAAAAGGCCCCAA CATC TTGGGGCCTTTTTCTTTTTTATC TTCTTACTTGATAGG 100 17
HCN55_RS08660 NONE
         ffh 1666812 .. 1666832 +    -4  -3.61398   TACCTTTTATGTAAT            CGGTTATA CATGA TAAAACCG            TTGTTAAGAAAAAAC  52 27
        rpsP NONE
HCN55_RS08675 1667437 .. 1667457 +  -3.9  -5.40072   ATATTTGACTAAAAG            GGAGAGG GCCGGCA CCTCCCC            TTTTTTTACACGCAA  78 29
HCN55_RS08680 1667929 .. 1667941 +  -5.5  -2.62184   AAAAGTAATTGAAAT                TCGCC AGA GGTGA                TCATATGACAAAGCG  51 13
        rimM NONE
        trmD 1669285 .. 1669295 +  -2.4  -3.49419   CTTGAAAACGATGTT                 CCGC TGT GCCG                 GTTTTTGTGGCCAAG  47 112
        rplS 1669702 .. 1669725 + -12.6  -5.60993   GATAACGAACGAAAA          GAGCTTGTTA CCTG TAACAAGCTC           TTTTTTTATACAGAA 100 42
        ylqF 1670674 .. 1670701 +  -9.2   -5.4833   GAACAGCCGACGATG        TAAAGGCGCGCA GAAA TGCGGGTCTTTA         TTTTTTCTTGGCTGA 100 23
        rnhB NONE
HCN55_RS08710 NONE
HCN55_RS08715 NONE
        sucC NONE
        sucD 1675823 .. 1675845 + -11.3  -3.31915   CGCATTAATAAAAAA           GGGACAGCC GTCAA GGCTGTTCC           TGCTTTTTCTAACAA  82 33
        dprA 1676772 .. 1676790 +  -6.8  -3.57908   GGAACCCTTTTGAAT             TATCGTTT GAC AAACGGTA             TTGTAATATTTAATA  64 28
        topA 1679034 .. 1679055 + -10.9  -4.21954   AACCACAGAAGTAGC           GGTGAGCAG GGTC TTGCTCACC            TTCTTTGTGTGTTAA  90 27
       trmFO 1680462 .. 1680474 +  -5.5  -3.04144   TACCATTTAAAAGCC                CTTCC TGG GGAGG                TATTAGGCATGGAGA  53 72
        xerC 1681395 .. 1681410 +  -6.2  -3.02856   GCATTTAAGAAAAAT              TAAAGG AGGC CCTTTA               TGTCATCTTTTCATG  56 23
        clpQ NONE
        hslU NONE
        codY 1684204 .. 1684222 +  -9.6  -5.95539   CATTAATCACAAAAA             GAACCCTT TTT GAGGGTTC             TTTTTTTATTTCAAA 100 35
        flgB NONE
        flgC NONE
        fliE NONE
        fliF NONE
        fliG 1688421 .. 1688447 +  -2.4  -2.83519   GCGGAGGGGATGATA         TTATTGTCTAAT ATC ATTAAACAAGAA         TCATCTATTTCTCCA  41 15
        fliH NONE
        fliI NONE
        fliJ 1690930 .. 1690944 +  -2.8  -2.62184   TTTATGATTCAAGGC               CATTAG GAG CGAATG               TAATGTCCGGCAAAA  41 20
HCN55_RS08805 NONE
HCN55_RS08810 NONE
        flgD NONE
        flgG 1694278 .. 1694305 +  -9.8   -3.8823   TAAACGTTAAGGAGG        GAGGGGAGGCGA GTAA TCGCTTCTCCGC         TGTTTTATGATTAAA  85 31
        swrD NONE
        fliL NONE
        fliM NONE
        fliY 1697128 .. 1697140 +  -2.7  -2.56864   AAGGAGAGAGATAGA                TTATG GCA CATAG                AATTTTAATTGTAGA  41 49
        cheY NONE
        fliZ NONE
        fliP 1698805 .. 1698817 +  -4.1  -3.08522   ATTTAATTGTGAAAT                CTTTG CTT CAGAG                CTTTTAGGGTAGGTG  47 6
        fliQ NONE
        fliR NONE
        flhB 1700974 .. 1700986 +  -2.7  -3.53012   AAAACAAAAAGTATA                TTGAA TTT TTCGA                TTTAAAAGGAGAGAA  48 22
        flhA NONE
        flhF NONE
HCN55_RS08885 NONE
HCN55_RS08890 1706103 .. 1706124 +  -4.5  -2.67058   AAAAAAGAGAGGGTG           TGATTCAAA TGGA TATGAATCA            GTATTTAGATGTCTT  47 23
HCN55_RS08895 NONE
HCN55_RS08900 NONE
HCN55_RS08905 1709249 .. 1709282 +  -3.9  -3.48378   GAAAAGCTCTTTGTC     GCCTTAGGTGCA-TCA TTA TGAGTACAACTGAGGC     TGTTGTTATAAAGGT  52 5
HCN55_RS08910 NONE
        sigD NONE
        swrB 1711158 .. 1711170 +  -4.8  -3.48593   TTTATGCAGAGGGTG                CTGC AGGCG GCAG                TTCTGTACAAAAATG  57 98
        rpsB 1711981 .. 1712009 + -12.6  -5.00616   GTAACCTATTCAAAA        GGTGATAAGAGG GACTG CCTTTTATCACC        TTTTTTCAAGAAAAA 100 37
HCN55_RS08930 1712997 .. 1713021 + -13.7  -4.61633   TCTTTTCAGGCAGTA          TAGGGGACACA TTT TGTGTTCCCTA          TTTTTAAAACTATAT 100 70
HCN55_RS08935 NONE
         frr 1714407 .. 1714443 +  -2.4  -3.29038   TACAATAGATAATAG    TGAAAAGACCCTCT CATGTTTAC AGGGGGTTTTTTTG    TTAATACTGTTGATT  43 53
HCN55_RS08945 NONE
HCN55_RS08950 1716094 .. 1716110 +  -6.7  -2.87026   TACTTTCTGCTTGCC              CTTTTTT CAT AAAAAAG              TCTAATATGAATATG  58 14
         dxr NONE
        rseP NONE
        proS 1720369 .. 1720391 + -12.1  -3.26188   ATAGAAATAATAGAA           GGTACCTCA TTGCC TGAGGTACC           TTCACTTATGATGTT  87 74
HCN55_RS08970 1724751 .. 1724773 + -13.6    -3.524   GTTCTAATATGGAAA           GCAGAATTTC TCA GAAATTCTGC           TTCTATGCATACATA 100 34
        rimP NONE
        nusA NONE
        rulR NONE
HCN55_RS08990 NONE
        infB NONE
HCN55_RS09000 NONE
        rbfA 1730108 .. 1730134 + -10.9  -4.42976   CTGAATAAAAAAAGA         GAGGATAGGCG TATAT CGTCTGTCCTC         TTTCTTCGTTTATAA  95 33
        truB NONE
        ribF 1732059 .. 1732077 +    -6  -2.52464   GGAAGCCATCCGTTA             TTTCAGCA ATT TGCGGAAA             TAACTTGCAACGCAC  54 4
        rpsO 1732516 .. 1732531 + -10.4  -5.36965   CGATAATCGTAAAAA              GCGGGA GGAT TCCCGC               TTTTTTATCGTATTA 100 35
         pnp 1734811 .. 1734832 +  -8.7  -4.66535   AATGAAAACATAAAA           GGAGCCTGGG AGA CCC-GGCTTC           TTTATTTTGAAGCTT  90 40
HCN55_RS09030 1735881 .. 1735891 +  -3.2  -3.64703   GAAGTAACAGATGAA                 GGCA GCT TGTC                 TTTGAATAGGAGGAA  52 34
HCN55_RS09035 1737149 .. 1737173 +  -9.9  -5.19261   CGTCTTAAAAAGGAA          AGCCTGCCCCA TAA TGGAGCAGGCA          TTTTTTAATCCCTTT 100 33
HCN55_RS09040 1737523 .. 1737543 + -11.2  -5.71712   AGAAAACATCTGAAA            CATCGGCT GCCGG AGCCGATG            TTTTTTTATATGGAA 100 72
        dpaA NONE
        dpaB NONE
         asd 1740353 .. 1740386 +  -8.3  -3.08996   TTCTAAAGACGAATA     GAAGAGAGTAAGGC GCTATCA GCC-TGCTCTCTTC     TGTTACGTCCGAATA  67 52
        dapG NONE
        dapA 1742562 .. 1742593 +  -4.4  -4.71418   ACAGTGAAACAAACG      CGGTCATTCTCA CATTCAGC TGAGTTTGACCG       TTTCTTTTACATATT  68 52
HCN55_RS09070 1744389 .. 1744415 + -18.2  -5.37345   AGTATAATGACTGAC         TAAAGACCGGAG CTG CTCCGGTCTTTA         TTTTTTGTCCTTCAA 100 34
        tepA NONE
        tepJ 1745503 .. 1745521 +  -7.4  -4.38203   TCCTACAGAAAAAAC             GCAGCC TGTAAAC GGCTGC             TTTCTTCATTATGTA  79 86
     spoIIIE 1747919 .. 1747951 +  -4.8  -4.15657   TCAAAAGAGAAATAT      GATGAGCTCTCTTC TTAAT GAAGGGAGTTCCGC      TTTCTATAGTTGTCA  63 8
HCN55_RS09090 1748809 .. 1748828 +  -3.5  -5.95539   AAACGATTCTAAAAA            CGGACGC CTGTAT GTGTCTG             TTTTTTTATTTGCAC  88 29
        bcbE 1750143 .. 1750161 +  -5.3  -5.49809   AGAAAAAAACTTAGG            GACGGTCT AGCC AG-CCGTC             TTTTTTTGCGCTTTC  88 16
HCN55_RS09100 NONE
HCN55_RS09105 1752902 .. 1752923 +    -8  -4.82901   AAATCATAAACAAAA           CATCCCTC CAGTGT GAGGGGTG            TTTTTCTGCGGAAAG  88 32
        efpI 1753680 .. 1753693 +  -6.7  -3.13164   GCTGGCACTGCTGAT               CCGAA AATA TTCGG                TGTATAGTTTCTTTT  61 27
HCN55_RS09115 1754022 .. 1754039 +  -7.7  -5.63645   CACTCACTAGGAAGA             GAGGGGA TTTT TCCTCTC              TTTTTTATGTTTTCC 100 31
        rodZ 1755859 .. 1755880 +  -4.5  -4.65916   TTAAAAGGAAGAAAA           GTCATCT TAATTACC AGATGAC            TTTTCTTCACGTCCG  68 37
        pgsA NONE
HCN55_RS09135 1757854 .. 1757867 +  -3.1  -3.86307   CGCCAAGAAAAAATC               CGAAT ATGC GTTCG                CTTTTTTCTTGGCAA  55 112
        recA 1759017 .. 1759035 +  -8.9  -5.63645   CAAATGATACAAAAG             GCTGAGT GAAAA ACTCAGC             TTTTTTGTATTTTGC 100 56
HCN55_RS09145 1760428 .. 1760444 +  -4.5  -2.80715   GTATTTCCGACACAT              TTACAAT GAA GTTGTAA              CATTTGTTTTTTTAA  48 124
         rny 1762165 .. 1762191 + -12.5  -5.40072   GTAGAGTATGCAAAA         TAAAGTGATGC GCTAA GCATCACTTTA         TTTTTTTGACGGCAA 100 23
        ymdB 1763176 .. 1763197 +  -5.9  -2.66711   AGCAACATCTAATAA           TGATTGTTC TAAT GAACACTCA            CTTATCCATTGTAAA  54 171
       spoVS 1763509 .. 1763537 + -16.9  -5.10877   CAAATAAAGCATTCT        CAACCTGTTTGCG TAA TGCAAACAGGTTG        TTTTTCATTTATTGT 100 44
         tdh NONE
HCN55_RS09170 1765994 .. 1766015 + -13.1  -4.52101   CAGCTATTGTAACAA           GAGGAAGAG TTTA CTCTTCCTC            TTTTGATTCCTTATT 100 29
        miaB NONE
        ricA 1768102 .. 1768124 +  -9.9  -5.75599   GCTGTTCTCTCTAAA          CACGGTGCCT TTAC AGGC-CCGTG           TTTTTTTATCATTTG 100 27
        cotE 1768912 .. 1768942 +  -6.1  -5.49569   CTGAAGAATAAAAAA       GGGACTAGGGG AGACAGTAC CCCCAAGTCTC       TTTTTTATATTGATA  91 30
        mutS NONE
        mutL 1773528 .. 1773558 +   -20  -5.67967   TAGCGGGGGTGGTAG       GCATTGATCCATTC TCT GAATGGATCAATGC       TTTTTTTGTACTCCT 100 38
HCN55_RS09210 1775835 .. 1775869 + -10.9  -5.79595   GCACTAGTGTGAAAA    GCGATTCTTGTTGGGC ATGC GTCCAA-AAGAGTCGC     TTTTTTATTTTCAAA 100 42
HCN55_RS09215 NONE
HCN55_RS09220 NONE
        fabD 1777931 .. 1777944 +  -2.3  -3.02947   CCCCGCTAAAGCATT               TGCCC CTAT GGCCA                TGTATCTCATCAATC  42 32
HCN55_RS09230 NONE
        fabD NONE
HCN55_RS09240 NONE
        pksF NONE
HCN55_RS09250 NONE
HCN55_RS09255 NONE
HCN55_RS09260 NONE
        pksJ NONE
        pksL 1814811 .. 1814822 +    -3  -3.59979   GGCTTCTAAAGATAT                GTTT TGGA AAAC                 TTTCAAATAAGAGAG  48 4
        pksM NONE
HCN55_RS09280 NONE
HCN55_RS09285 1851828 .. 1851851 + -12.4  -4.32951   CTGAGAAAACACAAA          CGCCCCCTCT TTTA AAAGGGGGCG           TTTTGAATGTTATTT  93 37
HCN55_RS09310 NONE
HCN55_RS09315 1857979 .. 1858003 +  -9.3  -5.47159   GGAGAATAAAGAAAA          CAGACGGTC ACTCACA GGCCGTCTG          TTTTTTATCTTCAGC 100 32
HCN55_RS09335 1859618 .. 1859635 +  -2.7  -3.11768   AAAAAAAGGGCAAAA             TGGATAG GTGG TTGTCCA              TGTTGAATGCTATAA  45 59
        miaA NONE
         hfq 1860922 .. 1860945 + -13.8  -3.37188   CAAGACATGAGGAAA          GGCTGTCGGG GGTT CCCGGCGGCC           ATTTTTAACATGAAT 100 58
HCN55_RS09350 NONE
HCN55_RS09355 1861718 .. 1861749 + -12.4  -4.13963   TAAAAACGACACCCC      GAGTAGGACGAGAG ATGA TTCTCGTTCTGCTC       TCTTTTTTGGGCCCT  93 74
        nrdI NONE
        nrdE NONE
        nrdF 1865362 .. 1865382 + -12.7  -4.19238   TTTGAAGATGAAAAA            GAGCAGATA TAA TATCTGCTC            TTTTCGGCTTGAAGG  95 14
HCN55_RS09375 1866049 .. 1866075 +   -13  -5.60993   TCTTGAATAAAAAAA         CCCGGTTTCTCG CGA TGAGGAGCCGGG         TTTTTTTATGAGACG 100 31
       spoVK 1868464 .. 1868490 + -12.4   -5.2112   GCATCTGGATCTGCA         TAGACCTCTCAG TTT TTGAGAGGTCTG         TTTTTTGCTCGTATT 100 23
        hflX NONE
HCN55_RS09395 1871146 .. 1871156 +  -2.6  -4.11295   AGCAATTAATTTAAA                 TTTT TTA AAAA                 TTTCTCTGGATTTGA  55 27
        glnR 1871669 .. 1871681 +  -3.4  -2.98356   TTCATTAATCCGTTA                GCAA CTGTT TTGC                TATATACATTTACCT  45 33
        glnA 1873063 .. 1873089 + -13.8  -5.49569   GTATTAATATCTCAA         TCCCTTGGCACT AAA AGTGTCAGGGGA         TTTTTTATGTTAATA 100 34
HCN55_RS09410 1873839 .. 1873869 +  -3.4  -2.78679   TGAAACATTTGCTGA      GG-CATTTCGTGA AGCTGA TCACCAAATGACC       ATTTCCATAGAGGCA  44 192
HCN55_RS09415 1874313 .. 1874323 +    -4  -4.82855   ATAGTCATATTTCCC                 GTAA GTA TTAC                 TTTTTGGATTTAATA  69 76
HCN55_RS09420 1874772 .. 1874791 +  -2.2  -2.83112   TGACACTAGATGGTA            TTAAGAAA GCAG TTTCTAAA             TATGGTACATTCCCT  41 153
HCN55_RS09425 NONE
HCN55_RS09430 1876143 .. 1876177 + -18.9  -4.08689   CAATCTTGTTGGTAA     CAAACATCCTCTTAC TTATT GTAAGAGGATGTTTG     TTTAATTCTTACATA 100 42
HCN55_RS09435 NONE
HCN55_RS09445 NONE
HCN55_RS09450 1878654 .. 1878664 +    -4  -3.02144   GAACGGAGACTTGCT                 TTCA ATA TGAA                 TGTTAAAAAAGCTGC  47 63
HCN55_RS09455 1878943 .. 1878957 +  -2.1  -2.63041   GAGTTTAAAATCCAT               TAGGC ATTAC GCTTA               TACATTGGTATTTTC  40 33
HCN55_RS09460 NONE
HCN55_RS09465 1879812 .. 1879830 +  -3.9  -3.48914   TATTGAATAAATTAA             TACGGAA TTAAT TTCTGTA             TTCCCTTTTGTTTCC  52 15
HCN55_RS09470 1882014 .. 1882025 +    -3  -3.57561   CAAAGTTTATTTGGA                TCAT ATTG ATGA                 TTTCAAGGCTTAAAA  48 1
HCN55_RS09475 1884136 .. 1884154 +  -4.6  -4.25848   GATAGGACAGTTTTT             TCTCTTTG GTC TGAAGAGA             TTTTAATAAAGCCTT  64 491
        xylA NONE
        xylB 1888490 .. 1888516 +    -3  -5.66229   TGTTAACACACAAAT        AACCCCT-CAC ATTGAC GTGAAGGGGTG         TTTTTTATTGTTACT  81 325
HCN55_RS09505 1891194 .. 1891210 + -10.9  -4.41895   TCAGAAAAAACAAAA              TCCCTCT GGT AGAGGGA              TTTTGATTCAGCATT  95 85
HCN55_RS09515 NONE
HCN55_RS09520 1894277 .. 1894292 +    -4  -3.28145   CCACTAATAATAAGC              CAAGTT AAAT GACTTG               TGTTCATTAATAATT  48 493
HCN55_RS09530 1895424 .. 1895453 +  -5.9  -3.16944   AATAAGATCCTCACT       TTATCTGCAAGTGC TTA GTATTTGC-GATAA       TATTGCATTCGTAAT  58 209
HCN55_RS09535 1896462 .. 1896481 +    -8   -5.4505   ATAATACATAAAAAA            GATTAACT CTAC AGTTAATC             TTTTTTATTCAGAAG 100 134
HCN55_RS09565 NONE
HCN55_RS09570 1899546 .. 1899561 +  -7.6  -5.64873   GAAAAAAACAAAAAA              GAGAGA TACC TCTCTC               TTTTTTATTCTTCGA 100 70
HCN55_RS09580 1900565 .. 1900587 + -13.6   -5.4505   TTGATTTCTTTAAAA           GCATGATGAA ATG TTCATCATGC           TTTTTTATTGAGAAA 100 95
HCN55_RS09585 NONE
HCN55_RS09590 NONE
HCN55_RS09595 1904690 .. 1904710 +  -4.8  -5.33866   ATGAATCCCAAGGAA           GAGAAG-GA AACC TCTCTTCTC            TTTTTTATGCATTTA  84 40
HCN55_RS09600 NONE
HCN55_RS09605 NONE
        yndJ NONE
HCN55_RS09615 1908294 .. 1908317 +  -6.6  -5.58522   AGAGAAAATAAAAAG          TGCACAGGCC AAAG GGCAGGTGCA           TTTTTGTTTTGTATG  93 30
        pghL 1909278 .. 1909302 +  -7.2  -3.51091   ATAGCTACTGAAAAA          TAGGAGGC GATAAGACA GCCTCCTA          TTCCTTATGCTTCTC  67 30
        fosB 1910875 .. 1910906 +  -9.5  -4.45485   CTTTTTTTGAACAAC      AAACCCCCTC-TCC GTAAA GGAAGAGGGGGTTA      TTTTATGCATCTGAT  91 509
        yneA NONE
HCN55_RS09645 NONE
HCN55_RS09650 1912992 .. 1913018 + -11.7   -4.2535   ACTTCACTAATATAA         GAGGAATACGG CAATA TCGTATTCCTC         TTTTGCATATACTAT  91 31
         tkt 1915169 .. 1915190 +  -8.8  -5.42164   AGTAAGCTTTTGAAA           GAGGATGA GTCAAA TCATCCTC            TTTTTCTTGTTTATC 100 36
        sirA NONE
HCN55_RS09665 1916101 .. 1916126 +  -9.2  -4.17023   AACATGGTTATAAAA         TAAAAAACCC TTATAC GGGTTTTTTA          TTTTGCAATCATTCA  85 65
        ccdA NONE
HCN55_RS09680 NONE
HCN55_RS09685 1918261 .. 1918282 +  -8.8  -5.63517   AAATGAATTAAAAAA           CCTTTCCT CTTGTC AGGAAAGG            TTTTTTATTTGAGAA 100 30
        acnA 1922715 .. 1922741 + -11.7  -4.83169   CTGATGAATCAATAG         GAAGAGAAGGC ATTTC GCTTTCTCTTC         TTTTTATGACACAAT 100 37
HCN55_RS09715 1923273 .. 1923293 +  -6.2   -5.9873   GAAATGGAACAAAAA            CTGGATCT TGATT AGATTCAG            TTTTTTTTATACTCA 100 11
HCN55_RS09720 NONE
        sspN NONE
HCN55_RS09730 1923997 .. 1924010 +  -8.1  -6.02919   ACCGTTCTTAAAAAA               CCAGG GAAA CCTGG                TTTTTTTCTTTCTGA 100 30
HCN55_RS09735 NONE
HCN55_RS09740 1924814 .. 1924834 + -11.2  -5.54885   TCATTTGTAAAAAAA            GAACGCAC ATGAA GTGCGTTC            TTTTTTATTGGTATT 100 31
HCN55_RS09755 1926383 .. 1926414 + -14.7   -5.0925   AATAGGTGCAGAACT      GCAAAAATCCTTG TAAATT CAAGGATTTTTGC       TTTTTAATTTTAAGA 100 36
        parE NONE
        parC 1931165 .. 1931197 + -12.1  -4.38116   TACAGAACAATAATA      AAAAACCCGCTCATA CTA TATGAGCGGGTTTCG      TTTGATTTTTATCAG 100 28
HCN55_RS09775 1933634 .. 1933658 + -15.9  -4.99435   TAAATATAAAACAAA          GCTGCATTCAA TAG TTGAATGCAGC          TTTTTCATTATTGGA 100 43
HCN55_RS09785 1935780 .. 1935824 +  -5.2  -4.93079   GCAGTAAAATTTCAA TTTCTGTCTCACTAACTTAAG TATA CTTT-GATATTGAGACAGAAA TTTATTTATTTTGTT  76 52
HCN55_RS09800 NONE
        galU NONE
HCN55_RS09810 1941571 .. 1941605 +   -13  -5.63103   ACGATAGCTAGCGGA     TATGCATAGGGGTG ACTGACG CTCCCCTATGCATA     TTTTTTTACTTGCGA 100 34
        iseA 1996487 .. 1996505 + -10.2  -5.74086   GTTATATAAGAAAAA             CGCCCGGT ATA AGCGGGCG             TTTTTTATTTGGTTT 100 32
         ggt 1999747 .. 1999771 +  -7.9  -5.14965   TAAATAAATAAAAAA          CTGTACTCGCT TCA AATGAGTACAG          TTTTTTCATGCAGAT  93 34
HCN55_RS09945 2001819 .. 2001846 +   -15  -3.35616   AATGGAATAAAAAAA        GAAACCGG-CTGG CAG CCAGACCGGTTTC        TCTTATATGATAATC 100 31
        gltC 2008990 .. 2009016 + -11.7  -5.61596   AATAAAAAAAATGAA        CCCGA-GCTTCT ATAT AGAAGCTTCGGG         TTTTTTTCTGCAAAT 100 36
HCN55_RS09985 2013032 .. 2013074 +  -3.4  -4.56775   GCAGATAAGGATGAA TGAGATCCCGTTGTTACGAT CAG AATGGACAAATGGGATCTCA TTTTTCGAGGAGGCT  64 33
HCN55_RS09990 NONE
HCN55_RS09995 2014431 .. 2014456 + -11.3  -2.87931   TACTCTATTGTGAAA         CCAAGAGAATG ACGG TATTCTCTTGG          TCTGTGCCACATCCC  79 14
HCN55_RS10015 NONE
HCN55_RS10020 2021110 .. 2021142 + -14.2  -3.45231   GAATAAAACAAATCT      GAGGAGAGCGAGAT TCATT GTCACGCTCTCCTC      TGTTTAGCTGTATGG 100 35
HCN55_RS10035 NONE
HCN55_RS10040 2022935 .. 2022948 +  -6.7  -4.03586   GAAGTAAGCTGTTGA               GTTGC TGCT GCAAC                TTCTTGTATTTGAGA  70 349
        hpaB 2026194 .. 2026213 +  -7.1  -4.20024   AGAACATTGAAAAAA            CAGCGGG AAAAGA TCCGCTG             TTTCGTATTTTTTAT  75 31
HCN55_RS10065 2029088 .. 2029116 + -13.1  -4.95155   GCTACTGATATAAAA        GAGGCCCTGCGTT AAA AACGCTGTGCCTC        TTTTTATACTATAGG 100 33
HCN55_RS10070 2030372 .. 2030385 +  -3.1  -4.99645   TCTTTCATCTTACAT               GAAGG TCTT CTTTC                TTTTGTTTATCCAGT  70 377
HCN55_RS10100 2034336 .. 2034348 +  -4.1  -3.86311   TTTTTAATGATGAAA                CAGGT TGC ACTTG                TTTAGGTTTCACTGT  57 34
HCN55_RS10120 NONE
HCN55_RS10125 NONE
HCN55_RS10130 2038293 .. 2038303 +  -8.2  -3.68738   TTTGACAAACTCATG                 CGCC GCC GGCG                 TTATCTCTTCAAATG  69 188
HCN55_RS10140 2040210 .. 2040235 + -11.3  -3.08966   TAAACAATGAAAAAA         GCTAATGTCTG CATG TAGACATTAGC          TTGGCTGGCGTTTAG  79 130
         bla 2042803 .. 2042824 +  -9.5  -4.00042   CTTTTTTAACTTCTA           CCGTTCATT TTTT GATGAACGG            TTCTTTCATAAGACC  83 77
HCN55_RS10175 2044260 .. 2044275 +    -9  -5.25799   GTTTAAACTTATAAA              GGAGCT TTTT AGCTCC               TTTTTCTCTTGTTTT 100 35
HCN55_RS10195 2049919 .. 2049932 +  -8.1  -4.18018   ACAACAATTAAAAAA               GCCCT CATA AGGGC                TTTTGCATAAAACAA  79 30
HCN55_RS10205 2050888 .. 2050903 + -11.8  -3.06862   ATTAAGCAGATCCAA              GCCCCC ATAT GGGGGC               GTTCTTATTATTGTA  83 36
HCN55_RS10210 2051783 .. 2051825 + -11.6  -5.07523   CCATATCGCTTTATA TACCACCTCCT-CTTAG CTAATATGTT CTAAGTAGGAGGTGGTA TTTTGTTTGTATCTC 100 50
HCN55_RS10225 2053525 .. 2053537 +  -4.9  -4.06281   CCATCCTTATATGTT                TAGTT AAA AACTA                TCTTTTATTTAGACT  63 19
HCN55_RS10235 2054384 .. 2054401 +    -7  -4.77925   TGTTTAAACTTATAG             GGAGCT TTTTTT AGCTCC              TTTTTCACCTTTTTT  83 34
HCN55_RS10240 2055302 .. 2055327 +  -9.8  -5.88061   CCGAGATAAACCCCA         TACCCTTCTC TTGATT GAGGAGGGTA          TTTTTTTCGTTTTTT 100 32
        rapK NONE
        phrK 2056707 .. 2056731 +  -9.4  -5.22137   TGATTAATTAATTTA         GCCCTACTCAA ACAT TTGAGT-GGGC          TTTTATTTTATGATT 100 48
HCN55_RS10265 2058754 .. 2058784 +  -2.6  -4.65168   ATTCACACGTAATCT       CTCTCTATCTTCTT TAA AAGAGGATATGTAG       TTTTTAGACTCTAAT  65 102
HCN55_RS10280 2063350 .. 2063377 +  -9.2  -5.86976   GCAACTTTTTGTACA        GAGCCGGGGTGTT GGT AGCACCTCGG-TC        TTTTTTATTTTATGC 100 100
HCN55_RS10305 NONE
HCN55_RS10310 2072344 .. 2072356 +  -4.9  -2.80398   AAATTCATTTCACCG                TTACT AAA AGTAA                TCCTTGCATTCCTTC  50 443
HCN55_RS10350 2078042 .. 2078081 +  -2.2  -4.68994   TACAATAAAGAAAAA  GACATCCTTGC-CCGCT AACAGCG AGTTAAGCAAGGATGTC  TTTTTCAATCATGCT  61 8
HCN55_RS10360 2079297 .. 2079332 + -13.5  -3.36515   AGTCTATCAATTTAC    TGACAAAAGCCCAAA AATGAA TTTGGGCTTTTGCCA     TGTTTACACGTAAAA  95 42
HCN55_RS10375 2081529 .. 2081541 +  -3.4  -3.15758   CAAGATATGCTGTAA                TGGT ATAAA ACCA                TTGATGGAGGGTTCT  47 61
HCN55_RS10380 2082538 .. 2082559 + -10.3   -5.0133   GATAAACATTAATCA           GCTTGTAAA TTTT TTTACAAGC            TTTTTTAGCGCAATC 100 29
HCN55_RS10385 2083762 .. 2083791 +  -9.4  -5.29445   ATGCCTGATGATAAA       GGAGGTCTTCTA ATATAC TAGAAGGCTTCC        TTTTTATTGTTGGAG 100 33
        desK NONE
        desR 2085609 .. 2085632 + -13.2  -5.08601   GGTTTAAATAAAAAA          GGATCTTGGC ATCT GCCAGGATCC           TTTTTGTTAACCTGA 100 30
HCN55_RS10430 2091921 .. 2091937 +  -5.1  -3.67296   ACAATATCCATGCTC              GGAAATG AAG CATCTCC              TTTCCCTCGCTGATC  57 316
HCN55_RS10440 NONE
HCN55_RS10445 2092662 .. 2092691 + -13.7  -5.03994   AACAGTGTGGTGTAA       TAAGAACAGGGCG CACA TGCCCTGTTCTTG        TTTTTATATATAAAA 100 26
        dhaS 2095386 .. 2095402 +    -8  -6.04953   TGTATGTTTAAAAAA              CTGCTG CCTGC CAGCAG              TTTTTTTCTTTCTGT 100 43
        sqhC NONE
HCN55_RS10470 2098208 .. 2098226 +  -8.8  -3.37493   GCTCTATTAAAAAAA             GCCCCC TTTCCTC GGGGGC             TTCGTGTGTTAAAAA  73 31
HCN55_RS10480 2100771 .. 2100798 + -14.3  -5.59534   AATATGCATCAAAAA        GGGTACATCAC TTTATC GTGATGTACCC         TTTTTTATTATCCTT 100 40
HCN55_RS10525 NONE
       rsbRC 2114910 .. 2114934 + -13.7  -4.90869   CTTAAAATTAAAAAA          GGTATAAGGCT TAA GGCCTTATACC          TTTTTGATTAATCAT 100 19
        gerT 2117800 .. 2117822 + -14.9   -5.5112   TCATCCGATAAAAAA           CGGCCTGCA ATCGA TGCAGGCCG           TTTTTTATTAATAGA 100 30
HCN55_RS10570 2120267 .. 2120291 + -12.9   -5.1675   CCACAAAAAAAAGAA          GAGAGAGCTCC AAA GAAGCTCTCTC          TTTTTTCATAAATGC 100 53
HCN55_RS10580 2121735 .. 2121759 + -14.4    -5.626   TAAGGATATGAAAAA          CCTTAGTCCG AAATC CGGACTAAGG          TTTTTTTATACAATC 100 38
HCN55_RS10595 NONE
HCN55_RS10600 2125174 .. 2125196 + -17.8  -5.89947   GGGCGCATAAAAAAA           CCATACGCGG CAG CCGCGTATGG           TTTTTTTTACATTTC 100 31
HCN55_RS10610 NONE
HCN55_RS10615 2127834 .. 2127858 + -12.2  -4.69549   ACCAGACACAATGAA          GCCCGCTTAT CTAGT GTAAGCGGGC          TTTTCATTTTAAATT 100 63
HCN55_RS10630 2129807 .. 2129832 + -16.3  -4.53636   AGCCTTAAAACTGCA         GAAAACTGCGG GTTT CCGCAGTTTTC          TTTTCATTATGTCGT 100 33
HCN55_RS10650 2131743 .. 2131772 +  -2.9  -3.59979   TTCTGTTCTATGGCC       GATAATGCGAAAG AGTT CTTTTCCATAATC        TTTAACATAAACAAC  50 427
        cgeA NONE
        cgeB 2143343 .. 2143362 +  -9.4  -5.84381   CGCTTTCTTGAAAAA            TCGTTCAT TGCT ATGAACGA             TTTTTTTATTCATAG 100 30
HCN55_RS10740 2145331 .. 2145346 +  -3.3  -3.08015   TGTCATTAATATCAG              TACAG ATAAAG CTGTA               TATTAAGATACTTAC  45 4
HCN55_RS10755 2146552 .. 2146570 +  -3.1  -5.10461   AGTTAATTAAGTTAC             GATGTGC TCTTT GCAAATC             TTTTTCTTCAATGGC  74 107
        sspC 2149764 .. 2149784 +  -7.6  -5.17054   ATTTCATTAATTTAT           GAG-GGGGA TAAT TCCCCTCTC            TTTTTTAAGTCTTCT  93 31
HCN55_RS10835 2152108 .. 2152118 +    -4  -5.88197   TTGGTTCTCCTCTCA                 TAGT TAG ACTA                 TTTTTTTCTATTTCA 100 148
        yosA 2163275 .. 2163296 +  -8.8  -5.93252   TCCCTGTTCGATAGA           CGCCATAA AACTTC TTATGGCG            TTTTTTATTTTTACA 100 73
HCN55_RS11090 2185626 .. 2185668 +  -4.4  -5.05113   CCATATCGCTTTATA TATCACCTTC-GCTTAG CTAATATGTT CTAAGTAGGAGGTGATA TTTTGTTTGTATCGC  74 50
HCN55_RS11095 2186982 .. 2186997 +  -3.4  -4.24326   GTTACCTCCTTCCAT              TAAAAT AAAT ATTTTA               TTTTAAATGCTATTT  59 524
HCN55_RS11105 2187379 .. 2187389 +  -5.4  -4.08887   TCTATATTCAACCCA                 GTTG ATC CAAC                 TTTGATTTCCCTCAT  65 127
HCN55_RS11125 2188834 .. 2188860 +  -4.5  -5.31877   AAAAAGAAACCTAAC         GGTAAAGAG TGTTAATTC CTCTTTGCC         TTTTTTATGCTAAAT  81 11
HCN55_RS11135 2189572 .. 2189590 + -11.7  -4.32046   AATTATTGATTTATC             GAGGGGG TGTTC CCCCCTC             TTTCATTTTTAGGAG  91 32
HCN55_RS11235 2197458 .. 2197484 +  -5.2  -4.01603   GAGATAAAAGAAAAA         TCCATTTAACCA AAA TAGTCAAATGGA         TTTCATATTTAAATG  63 179
HCN55_RS11310 2206038 .. 2206057 +  -6.5  -5.27335   GTGTGGCATGAAAAA            GAGCATT TAGTGT AATGCTC             TTTTTGTTTAAAACA  91 16
HCN55_RS11315 2206361 .. 2206373 +  -2.7  -2.95877   ACTTGTTGTAAACGG                TGTGA AAT TCATA                ATTTAATATGTTAAT  43 7
HCN55_RS11375 NONE
HCN55_RS11380 2218599 .. 2218609 +  -2.6  -3.82031   AATCTTTATTGTTCA                 TTTA GAA TAAA                 TTTAATAATACTTAG  50 230
        hupN 2219103 .. 2219143 +  -8.5  -3.37915   GGGTGCCGTCAATAA  TTAGTTGATTACTGATATT TGG GATATCAGTTCTCGACTAA  TGTTCATTTATGAAG  70 212
HCN55_RS11390 2219903 .. 2219918 +  -4.7  -2.69647   TTTCCTTCTCATTAT              TGGTG TTTCGC CACCA               TAATGTGTCGAGGTT  49 281
HCN55_RS11395 NONE
HCN55_RS11400 2222020 .. 2222050 +  -9.2  -3.38484   CGATTACATATTAAA       TTAAAGAAGGCT CCTATTA GGCCTTCTTTAA       TTAGGTTTATCTTGT  76 22
HCN55_RS11410 2223201 .. 2223247 +  -5.8  -3.75933   AGCACCTTTTTAGAA CGCCCAGCGAAGATTGCGGTA CTCCCC TTCCGCTCTATT-GCTGGGCG TTTCGTAAAATGTGT  63 40
HCN55_RS11415 NONE
HCN55_RS11420 NONE
HCN55_RS11425 2227507 .. 2227528 +  -2.3  -2.94232   AATCCTATTTAAAAC           TTCACTTTT GAAG GGAGGTGAA            ATTATTTGACAAAGA  42 29
HCN55_RS11430 NONE
HCN55_RS11435 NONE
HCN55_RS11440 NONE
HCN55_RS11445 2231075 .. 2231101 + -11.7  -4.87273   GGAGTCGCTGATCCT         TCCCTTCTCTT TGACT AAGAGGAGGGA         TTTTTATGACATCTT 100 8
HCN55_RS11450 NONE
HCN55_RS11455 NONE
HCN55_RS11460 NONE
HCN55_RS11465 NONE
HCN55_RS11470 2233590 .. 2233611 +  -5.2  -5.77734   TCGAGCAATTATTTG           GAGGCTAA TTAACT TTAGTCTC            TTTTTATTTTTATTT  88 18
HCN55_RS11475 NONE
HCN55_RS11480 NONE
HCN55_RS11485 2235270 .. 2235307 +  -2.7  -4.87665   ATATGGAATAAGCTA   CAAGAG-GATGGGCTTTT TGA ATAAGTCCTCCCCTCTTG   TTTTTCTAGATAAAA  65 2
HCN55_RS11490 NONE
HCN55_RS11495 NONE
HCN55_RS11500 NONE
HCN55_RS11505 2237498 .. 2237512 +  -2.8  -3.02263   CACGTTATCATTGTT               TGCTCA AAA TGAGGA               TATTAAGGAGGATAT  43 42
HCN55_RS11510 NONE
HCN55_RS11515 NONE
HCN55_RS11520 2239878 .. 2239893 +  -5.4   -4.5464   TATTCAGAATCAAGA              TTCCTC GTTT GAGGGA               TTTTGCTTATGTATA  73 454
HCN55_RS11540 NONE
HCN55_RS11545 2242390 .. 2242410 +  -5.4  -5.73978   AAGAAAGCAAACAAA            GTCGCTCA ATAAC TGAGTGGC            TTTTTTCTTTGTCCT  88 14
        cwlP 2249313 .. 2249332 + -12.2  -4.50159   AATGGTAGCATGTAA            GAGTCTGC AAAA GCAGACTC             TTTATTTAACTTAAC 100 26
HCN55_RS11555 NONE
HCN55_RS11560 NONE
HCN55_RS11565 2253598 .. 2253613 +    -9   -5.4505   TACAAAACTGACTAA              GATCCC CTCC GGGATC               TTTTTTATTGGAGGA 100 26
HCN55_RS11570 2255675 .. 2255702 +  -5.5  -5.31275   CATACGTGAGATAAA        GAGAGATTGGG TTTAGT CCCCTTCTCTC         TTTTTTGTGCTCAAA  86 132
HCN55_RS11575 NONE
HCN55_RS11580 2256758 .. 2256782 +  -5.9  -4.11744   TGGTGAATTCGAGGC          TCTTTTTAATT AGA AATTAAGGAGA          TGTTTTTATGTCAGT  67 13
        blyA 2257914 .. 2257949 +  -4.2  -4.58424   TTCAATTTTCTCGGA    GGATGTTTATTG-ATCA ATA TGTTTCAGTAAATATCC    TTTTCTATGGTACTA  68 46
HCN55_RS11590 NONE
HCN55_RS11595 2258490 .. 2258518 +  -7.4  -4.00097   TTTCGGATTACCTGT        GTAACCCTCCCT CTTAC AAGGCGGGTTAC        TTCTTATTCAATTAT  71 45
HCN55_RS11640 2265795 .. 2265821 +  -9.5  -4.39448   CCCCAATAAGTAAAA         TGCCCAGCT CTTTATTTA AGCTGGGCA         TTGTTTTCATTATTT  91 28
        bsrG 2267098 .. 2267125 +  -9.2  -5.54907   GGCAGCTTTTGTACA        GAGCCAGGGTGCT ACC AACACCCTGG-TC        TTTTTATTTTATGCA 100 112
HCN55_RS11685 2271854 .. 2271873 +    -5   -4.7657   ACTAAAGCAATGGAG            GATGGTTA TTTT TAACCCTC             TTTTTACACTTTTTC  74 231
        yokF NONE
HCN55_RS11700 2274663 .. 2274686 +    -6  -5.72616   GAGAGCAAACAAAAT          AAAAAGCCCG TTTT TGGGCTTTTC           TTTTTTTATATGGCT  91 24
HCN55_RS11705 2275865 .. 2275893 +  -6.1   -4.8048   TGACAGTTAAATCAT        TGAGCTTGGAAGG AAA TTTTTCAAGCTTA        TTTTTAGTGTCCACC  80 104
        sprA NONE
HCN55_RS11735 2280358 .. 2280386 +  -9.6   -4.6526   AAAAAGGCATAAAAA        CAAGCCTGTCTA TCCAT TAGGCAGGCCTG        TTTTTAACAGTTTAT  91 29
HCN55_RS11750 2281927 .. 2281952 + -10.5  -4.12902   AAACGGTGAAAAAAA         GCACATACCGA TATA TAGGTATGTGC          TTTTCGCAGTGCTTC  89 32
HCN55_RS11790 NONE
HCN55_RS11795 2289258 .. 2289278 + -12.6    -5.252   AACAGTAACAGAAAA            GCGCAGTC TTCAC GACTGCGC            TTTTTTATGCACGTA 100 39
        metA 2299772 .. 2299784 +  -3.3   -4.0342   ATAACTCCTTACGAT                GCATG AAG CTTGC                TTGTTGTTGATTACA  57 213
HCN55_RS11860 2300976 .. 2300998 + -12.8   -5.4659   TAATGGCGTACTTGA           GAGCATACGA AAA TCGTGTGCTC           TTTTTATTTATATTC 100 38
HCN55_RS11865 NONE
HCN55_RS11870 2301439 .. 2301458 + -13.6  -3.71107   GAGATGACAAATAGA            GGAGAGGC ATTC GCCTCTCC             TATTTGATTTTCATC 100 58
HCN55_RS11880 2302056 .. 2302096 + -17.9  -2.84098   TCAGCTGGATGAATT  CAAAGAATAAAAACCGCAG CTT CTGCGGTTTTTATTTTTAG  TGATTGGTTAAGACA 100 16
HCN55_RS11895 NONE
HCN55_RS11900 NONE
        sspL 2304278 .. 2304319 +  -9.6  -3.05597   CAAAAAAAAGCAATA CAAAACGCTAGAGAGGATC TAAAC GATC-TCTCTAGCGTTCAG CTTTTCAAGCATACG  74 15
        kduI NONE
        kduD 2320760 .. 2320779 + -12.2  -5.16572   CTGACAAATAAAAAA            GCTGACGA ACGA TCGTCAGC             TTTTTTCCATTACAT 100 37
HCN55_RS12000 2323350 .. 2323372 +  -9.2  -4.97402   GGCTGAAAGATGAAA           GAAGACGC ATGCAGA GCGTCTTC           TTTTTATGCGTTTTC 100 52
HCN55_RS12050 2331288 .. 2331312 + -14.5   -3.6471   CTTTCCAAAAAATAA          GCATGAATGAA CGA TTCATTCATGC          TTCTATCATTTAAAA 100 16
HCN55_RS12060 2332098 .. 2332124 + -12.4  -3.13382   CTATAAAAACGAAAA         GAAGACAGCC TTTTACC GGCTGTCTTC         TCTTGCAATTTCATC  87 52
        sspM 2333076 .. 2333098 +   -15  -5.04249   CGCCCTTCTACGTAA           GAAGCAAGGA ATT TCCTTGCTTC           TTTATTTTTTCAGCC 100 26
        recU NONE
HCN55_RS12090 2337498 .. 2337520 +   -12  -5.14563   AAATTAAACAAAAAA           GCCGTCACCT TTG GGGTGATGGC           TTTTTTGGTACACAA 100 34
HCN55_RS12185 2355188 .. 2355205 +  -4.1  -4.18908   TCATTCCATTTTTCA             TGAAAGC TTGT GCTTCCA              TTCTTTTGGACATCT  62 410
HCN55_RS12370 2386872 .. 2386896 +  -9.4  -4.64846   ATCATAATACAAAAA         GCCC-AAACCA CATA TGGTTTTGGGC          TTTTATCATTTATCG  91 34
HCN55_RS12460 2403297 .. 2403312 + -10.4  -5.68438   AAGTAACTAAAAAAA              GCTCCC GAAC GGGAGC               TTTTTTATTTAATGG 100 41
HCN55_RS12470 2405977 .. 2405996 + -10.8  -5.97979   CCATAATTAAAAAAA            CTCAAGCT ATAT AGCTTGAG             TTTTTTTATTGTTCT 100 35
HCN55_RS12550 2420685 .. 2420708 +   -11  -3.60395   AACGCAGAAAAAAAA          GCAGAGACTG ATCA CAGCCTCTGC           TTAATTATTGTATGA  84 15
HCN55_RS12590 2426659 .. 2426671 +  -2.7  -3.32343   TATATTCCCGGCAGT                TGAAG ACT CTTTA                TTATAAAACTCTGAA  46 7
HCN55_RS12605 2428629 .. 2428649 + -14.1  -3.10775   TGGCCAATAAAAAAA            GCTTCCTCT CTA AGAGGAAGC            CTTTTGCCTGCCGAT 100 126
HCN55_RS12615 2430227 .. 2430244 + -12.7  -4.91657   ATTCAAATAAGAAAA             GCGCCGA AAAA TCGGCGC              TTTCTTTTATTGCTT 100 31
        ansR 2451134 .. 2451147 +  -2.5  -3.51563   TCAGCTGACTGCACA               TATAA TTCA TTATA                TTCTCTGCCGATTTT  48 515
        mciZ NONE
HCN55_RS12755 2453559 .. 2453580 + -12.3  -4.69415   CTCATAGCAGAAAAA           CCAGCACCT GTAC GGGTGCTGG            TTTATTTATATTGAT 100 34
HCN55_RS12765 2454890 .. 2454915 +  -9.8  -5.47159   CAACAGAATAAAAAA         GCGAAAG-GCC TCTTC GGCTCTTTCGC         TTTTTTATGTTACAG 100 30
HCN55_RS12805 2459500 .. 2459513 +  -9.5  -3.27525   CTGTCAGTTCTTTCA               GCCGC TGAT GCGGC                TTCCCTTTGAAAACA  75 49
HCN55_RS12810 NONE
HCN55_RS12815 2461540 .. 2461587 +  -5.6  -2.85361   AATGCCCGTCTCCTC CGGCAAAAGGATGCC-TGTCTCG GTA CAACACACGATAGCCTTTTGCCG TCAATTTTTCAGTCA  51 99
        proC 2467307 .. 2467327 + -14.1  -5.93252   ATGTAAGGACAAAAA            CAGAAGGCA CAG TGCCTTCTG            TTTTTTATTTTTCCC 100 41
        namA 2470173 .. 2470196 + -12.6  -6.20267   TGGTAATGCCCATAA          GAGATATCCT GTAG AGGATATCTC           TTTTTTTATTTTTAG 100 35
HCN55_RS12860 2471245 .. 2471267 + -10.8  -3.30441   ATTAACATCTCCTTA           TAAAACGTAA TGA TTACGTTTTA           TTATACAACGTCATC  82 236
HCN55_RS12875 2473943 .. 2473970 + -13.6   -5.0538   AATAAGAAGAAAAAA        GCCGAAAATGTT TACA AGCATTTTCGGC         TTTTTTACGCTGAAC 100 39
        mifM NONE
        yidC 2478039 .. 2478064 + -11.2   -5.5604   GGTGAAATAAAAAAG         CAACCCCGTGC AAAAA GC-CGGGGTTG         TTTTTTGTTACTTGC 100 31
HCN55_RS12900 2478942 .. 2478976 +  -8.7  -6.09196   AGGAAATGGAGCTAA    AAAAACCCGA-TGCGG GAAA TCGCACTCGGGTTTTC     TTTTTTTATTTTGCC 100 26
      prli42 2482526 .. 2482536 +  -2.4  -3.35342   CCAAGCGGGTTATCA                 GGAG ATC CCCC                 TTCAATATTTTTCTT  45 316
HCN55_RS12955 2487898 .. 2487914 +  -4.3  -3.07962   TGCAAATCCGTTGAC              TCTCCCC TAG GAGGAGG              TCTTACAGTATAAGG  50 66
         bmr 2489131 .. 2489167 + -19.7  -4.12254   GCCAGCACGTGATAA    GAAGCGCATTCTTTGTG TAC TGCAAAGAATGCGCTTC    TTCTTTATACTGATG 100 29
        bmrR 2490052 .. 2490086 + -13.2  -5.04356   TAAAGCATAGAAAAA     GAGCATTTTTTGAA ACAAAAC TTCAAAAAATGCTC     TTTTTGCTTATTTAG 100 41
HCN55_RS13010 2500569 .. 2500586 + -12.7  -5.83226   GATAGCTGAAAAAAA             GCCGGAG AATG CTCCGGC              TTTTTTTGTTGCATT 100 36
HCN55_RS13060 NONE
HCN55_RS13065 2510869 .. 2510892 + -15.4  -5.24449   AGATTAATGTGCAAA          GACTGCCGAA ACGA TTCGGCAGTC           TTTTTTCCCTTTATA 100 34
HCN55_RS13205 NONE
HCN55_RS13210 2535785 .. 2535803 +  -6.7  -6.19302   CTGTCCGTCTTTTAC             CTAGCTC AATCA GGGCTAG             TTTTTTTTGTTGTGT 100 66
HCN55_RS13230 2538684 .. 2538704 + -14.1  -5.48623   AAGAAATAAAGCAAA            CAGCTGTCT GGT AGACAGCTG            TTTTTATTTATCTTT 100 32
HCN55_RS13250 NONE
HCN55_RS13255 2545590 .. 2545612 +  -4.2  -3.41229   CATTCGACATCATTC           TCGTTTTTTT TGA GAAAATACGA           TTATAATAAAGGTAT  53 50
        sinI NONE
        sinR 2546282 .. 2546316 + -13.8  -4.42386   AGAAAATCCCAAAAA    GAGGAGT-AGTGCCT GAGCAG AGGCACTAACTCCTC     TTTTGTCAATAACCA 100 17
HCN55_RS13285 2549142 .. 2549177 +  -8.5  -4.46835   ATATTAGAAGAATAT    C-AATAAGGTCCTCCA TTTTT TGAAGGACCTTATTCG    TTTATTTGCGGTTAT  86 20
HCN55_RS13335 2556207 .. 2556235 + -11.1  -2.80821   ATAGAAGTTAAAAAA        GCTGAATAGCC CGTGAAA GGCTGTTCAGC        TGCTATCTTTCAAGA  79 17
HCN55_RS13345 2557281 .. 2557320 + -12.3  -4.77036   TGAACAGGTGAAAAA  CCGAAGATAAGCTGATT CGTATA AATCAGCGGATCTTCGG   TTTTTCATCATGCAG 100 41
HCN55_RS13355 2558195 .. 2558219 +   -13  -5.44119   CATTAAATGCAGAAA          GAGACAAACC TTATC GGTTTGTCTC          TTTTTTTACAATGAA 100 35
HCN55_RS13365 2559193 .. 2559214 + -13.1  -4.97405   AACCGCACATTAAAA           CCTGTATCC GATC GGATACAGG            TTTATTTTTATGGCT 100 28
HCN55_RS13430 NONE
HCN55_RS13435 2570488 .. 2570504 + -12.3  -5.52384   AACACGATAAAAAAA              CAGGCTG ACT CAGCCTG              TTTTTTTCATCCAAA 100 31
HCN55_RS13485 2580880 .. 2580892 +  -3.5  -5.04325   GTAATTAATAAAAGT                TAAAT TAT ATTTA                TTTTTATCCTTTAAG  70 23
HCN55_RS13495 2582341 .. 2582351 +    -4   -3.9009   TCGGCGAAGACACTG                 TTAC AAT GTAA                 TTTGTAAAATAAATT  56 64
        ispG 2583545 .. 2583581 + -16.2  -3.02511   AATTAAAAGAAGAAA   CACAAAAAGCTTGACGG GAAC CCGTCAAGCTTTTT-TG    TGTTAGAAAAATGGA 100 12
HCN55_RS13510 2584685 .. 2584717 +   -15  -2.91429   ATACGCGTCAATAAC      TGAAAAAGGAGCCC AAACC GGGCCCCTTTTTCA      TATATACGCATTTTA 100 23
HCN55_RS13525 2586554 .. 2586585 + -14.7  -3.27766   AAACAATTTACAAGC      TAAAAAATGGGGG TGTTAT CCCCCATTTTTTA       TTGCTGTAAAATCTT 100 23
HCN55_RS13540 2589775 .. 2589790 +  -6.1   -5.1167   GAATGCAAGAATAGA              GCCGT TTGATT ACGGC               TTTTTATATTGCCTT  83 86
HCN55_RS13545 2590778 .. 2590798 + -11.2  -5.61596   AGTAAAAGCAAAAAA            CTGAGGCT GTAAA AGCCTCAG            TTTTTTTATAGAAAT 100 22
HCN55_RS13675 2614948 .. 2614969 +  -7.3  -5.15969   GGCTAAATAAAAAAA           TCGGTACAT TTTA ATGCACCGA            TTTTTTAGGTTAAGA  90 31
        rpsT 2629392 .. 2629413 + -10.9  -5.77856   TGCATAATATAAAAA           CGATCCTCA ATAA TGGGGATCG            TTTTTTTCATTTCTT 100 34
HCN55_RS13755 2630819 .. 2630840 +  -8.7  -5.31059   AACAGCGACTGCCCG           GGCTGCTGA TTTC TCGGCAGTC            TTTTTTAGTTCGTCT 100 39
HCN55_RS13775 2635395 .. 2635416 + -11.7  -5.04601   AAGCATTTTAAAAAA           CCATCGTTT TAGG AAACGATGG            TTTTTGATTTCTGCG 100 83
HCN55_RS13820 2641159 .. 2641169 +  -5.4   -4.3739   ACATGTGAAGCGCCT                 CCTT AAT AAGG                 TTTTATAACAGCCTA  70 268
HCN55_RS13835 2643767 .. 2643792 +  -3.9  -5.71712   GAAGGTGCCAAAAAA         ATAAGGAGGCT TGTT GGCCCCCTTAC          TTTTTTTCTGTCGCA  85 22
HCN55_RS13845 2645662 .. 2645681 +  -9.3   -4.0274   AGGATTGTAACAACA            GAGGCTC AAGAAA GAGCCTC             TTCTTTACTACTGCA  85 31
        rapE NONE
        phrE 2653800 .. 2653815 +    -9  -5.42164   TTCTGATTCCCTTTA              GCCGTT TCAT AACGGC               TTTTTCTTATTTCTA 100 59
HCN55_RS13900 NONE
        yqcG NONE
        yqxf 2656620 .. 2656646 + -13.8  -5.04868   AGAAGAGTCACTTTA         TAAGCCCCTCTC AAT GAGAAGGGCTTA         TTTTATTTAATTTGA 100 53
HCN55_RS13915 2657152 .. 2657173 +  -3.7  -5.97575   GTTGGACTAACCTTA           GTTGAAAAG CCTG CTTCTCGAC            TTTTTTTTCTAGGTT 100 321
        bsrH 2672293 .. 2672312 + -10.7  -4.21317   GCCAACATTTATACT            GACCCGG CGGCAA CCGGGTC             TCTTTTATTTTATGC  90 126
HCN55_RS14105 2685892 .. 2685913 + -13.1  -4.10717   CTGCACATCCAAGCC           GAAGGAGGA GATA TCCTCCTTC            TTGTTTACCTTTTTA 100 42
        sknR 2692675 .. 2692691 +  -3.7  -5.51353   TGAATCCTTTACAAA              CCCTT ACGTGAC AAGGG              TTTTTGTTGTTTTTC  81 153
HCN55_RS14190 2694990 .. 2695010 +  -3.3  -4.36914   ATTGAAAAGCGGGCG            CTGATGAAG ATG TTTCATGAG            TTTTATCGGGCAGAG  62 355
HCN55_RS14200 2695537 .. 2695554 +  -9.9  -2.71177   AACAAATAAAAAAAC             CGATGGT TTGT ACCATCG              ATCTGTTTTCTATAT  74 388
HCN55_RS14230 NONE
HCN55_RS14235 NONE
HCN55_RS14240 2701068 .. 2701126 + -21.4  -2.86242   GGAAGGTAATAATGA TGTTTAAAAGGTGTTTTGATCCCTGTCT CAT AAACAGGGGTCAAAACACCTTTGAATCA TCGGTTTCTTTTCTG 100 105
         blt 2711472 .. 2711483 +    -3  -4.55118   ATGATGCTGCAGCTT                TGAA TTAA TTCA                 TTTTCTATAAAGTTA  62 18
        bltD 2712192 .. 2712217 + -11.3  -3.62176   TCATTGTTTAAAAAA         GCCTG-GATGAA AAT TTCATCTCAGGC         TTTAAGCATCTTATT  84 111
HCN55_RS14335 2716036 .. 2716062 +  -6.7  -2.94454   TTCACGCAAAAAATA         GAGCAGTAA ACATGTGAG TTACTGCTC         TGCTTCGTTTATTCA  60 113
        gltR 2720130 .. 2720152 +    -7  -5.16071   GTATAGAGCAAAAAA           GCAAACTTCG GTA TGTAGTTTGC           TTTTTCTTCGTGATT  90 124
HCN55_RS14425 2731288 .. 2731310 +  -3.5  -6.17184   TTGATAGAGCAAAAA           GCAAACT TTGACAGGC AGTTTGC           TTTTTTTTTCGTAAT 100 51
        murI 2732457 .. 2732475 +  -8.8  -5.60993   AACATGAACTAAGAA             GCGGGCTT AAA AAGCCCAC             TTTTTTTCTAACAAA 100 73
HCN55_RS14435 2733554 .. 2733570 +  -7.9  -5.38497   TCGATAGTCTTAAAG              GGGGCTT AAC ATGCCCC              TTTTTTCATTTCAAT  95 82
HCN55_RS14440 2734175 .. 2734205 + -14.9  -5.52096   TTACCTCATATCCAT       CAGACGCCATAAG AAATC TTTATGGCGTCTG       TTTTTTATTAGATTT 100 50
HCN55_RS14460 2737258 .. 2737282 +    -8  -4.12188   TATCATATTAAGAAA         GACAAGAG-CA TGTT TGTCTCTTGTC          TTTTCCACATCGTGC  76 90
HCN55_RS14475 2741224 .. 2741244 +  -8.4  -4.29845   TACTGCAAATAAAAA            GATACCAA CATCA TTGGTATC            TTTTAGATTGAGTTC  81 234
HCN55_RS14485 2742839 .. 2742862 +  -8.2  -4.96848   ATAAACAAAACGGAA          GCACTGATAA AAAA TAATCAGTGC           TTTTTATATGGCGAG  95 37
HCN55_RS14490 2744109 .. 2744135 + -12.4  -3.22298   TCATCGCAGCAAAAA         CCATACCAACTA TTG TTGTTGGTATGG         TTCGTCCTAGATAGG  87 355
HCN55_RS14515 2746356 .. 2746367 +  -5.8  -3.69323   TCATCAATTGAAAGG                GAGG TAAG CCTC                 TTTGAATAATGATCA  63 30
HCN55_RS14520 NONE
HCN55_RS14525 NONE
HCN55_RS14530 NONE
HCN55_RS14535 2748739 .. 2748752 +  -2.4  -4.10453   TTTTAGGCCTGCTTT               TGAG CTTTGC CTCA                TTTTCACGCAATTTC  55 341
HCN55_RS14545 2749509 .. 2749528 +  -9.4  -4.14004   TTTAAAAAACCCTTG            CCTTAAAG CAGA CTTTAAGG             TTTATCGTTATGTTG  85 49
        adhA NONE
        yraA 2751312 .. 2751336 + -12.2  -5.09426   TTAAAATAACAAGAA          GGCACAGACT GTTCG GGTCTGTGCC          TTTTTTAAAATTAAG 100 32
HCN55_RS14590 NONE
HCN55_RS14595 2761257 .. 2761281 + -10.1  -5.07275   GTGAAATAAAAAAAA          GACAAGGGA TACTCAC TCCCTTGTC          TTTTTATATGTGTCA 100 32
HCN55_RS14605 2762984 .. 2763008 +   -13  -5.64274   CTCTTACCCCAAAAA          CAAGGCTTGT ACAAA ACAAGCCTTG          TTTTTTTATGCATAA 100 51
        sigV 2763636 .. 2763650 +    -5  -3.18264   GCGCATTCAGTTGAC               GAAGGA GGA TCTTTC               TTAATGGATAAGAGA  53 7
HCN55_RS14615 2764520 .. 2764541 +  -4.5  -4.72127   TCGATAAAATAAAAA           CATCCAT CTAAGATT ATGGATG            TTTTCTCTCTTCTCT  71 34
        oatA 2766523 .. 2766557 +  -8.8  -4.16182   TCAGGCGATGAAATC     GTAAAAAAGAGATC CTATACA GATCACTTTTTTAC     TTTAGTTTCTGATCG  81 22
HCN55_RS14625 2767162 .. 2767184 + -16.4  -4.90471   TCATATGCAAAGCAA           TCCCGCCAAT CAG ATTGGCGGGA           TTTTATATTTTACAT 100 237
        fdhF NONE
HCN55_RS14670 2777965 .. 2777986 + -10.2  -5.84381   ACAATAACAGAAAAA           CAGCCATC TCTGAT GATGGCTG            TTTTTTTATTCGTCG 100 34
HCN55_RS14700 2782190 .. 2782222 + -19.3  -4.75954   AGCTGAAGCCTAAAA      CAAAAGCAGCCGGTT TTA ACCCGGCTGCTTTTG      TTTATTTTAGCTTTT 100 28
HCN55_RS14770 NONE
        glnH 2797243 .. 2797269 + -10.9   -2.8372   GAATAACAACCATCC         CGGGATGAGCA GGCGA TGCTCATCCCA         ATTTGATAAGGAGTG  79 35
HCN55_RS14780 NONE
HCN55_RS14785 2798622 .. 2798643 + -11.7  -4.74103   GGCAAACATAGAAAA           GGATACTCT TTGG AGAGTATCC            TTTTTGCATTAAAAC 100 30
HCN55_RS14830 2806907 .. 2806945 + -14.8  -3.08415   TGAAAAGAAAATAAA   ACAAAAAAACAGCCTTGA TCA TCAAGGCTGTTTTTATGC   ATTATTTATCCTTCA 100 27
HCN55_RS14860 2813360 .. 2813375 + -10.4  -6.09196   CTTCCAATAAAAAAA              GCTGCC TTTT GGCAGC               TTTTTTTATTTTGAA 100 31
       spoVB 2824425 .. 2824443 +  -4.5  -3.99327   TTGATCATCCGATAA             TGGTCAC GTGCG GTGCCCA             TCTTTTTCATCAATA  59 26
HCN55_RS14915 2825664 .. 2825709 + -14.2  -3.01416   GGGGAAACAGGTCTT CCACATAAAAAAGAGCGGGC TCACTT GCCCGCTCTTTTTTGTTTGC TATGTATAGCTCCTG 100 18
HCN55_RS14965 2834059 .. 2834102 +   -14  -5.42514   AAAAGAAAATATTCT TAAATCAAAAAGGCAGCCGC ACAA GCGGCTGCCTTTATCATGTA TTTTTTACTTTCTGA 100 23
HCN55_RS14975 NONE
HCN55_RS14980 2834757 .. 2834779 +  -9.1  -5.93252   GCCTCTGTAGAAAAA           CGCAGCGTA GTCGA TACGCCGCG           TTTTTTCTTTTTCCC 100 31
HCN55_RS14985 2836381 .. 2836405 +  -8.5  -5.24531   CTGAACATACTAAAA          CCGGCCCGA TATGACC TCGTGCCGG          TTTTTTATGAACGAT 100 37
        nifS NONE
HCN55_RS15025 2844568 .. 2844581 +  -5.2  -5.71983   TAAAGACTAAAAAAA               GCCC TCTAGT GGGC                TTTTTTTATAATTGG  88 31
HCN55_RS15050 2848150 .. 2848171 +  -5.8  -5.12617   ATATTGCAAAAAAAA           CTCCAGTC ATCATC GACCGGAG            TTTTTTGAATCATTA  83 112
HCN55_RS15135 2863285 .. 2863297 +  -4.9  -5.55695   AAGACGTGGACTCGT                TTTCA GCC TGAAA                TTTTTTCTCTTGTTC  88 61
HCN55_RS15180 2873166 .. 2873199 +    -7  -5.53991   AATCTATACGATAAA    T-A-AAACCGGTAGAG GATC CTCTACCGGTTTATCA     TTTTTTTGATCGCTC 100 27
        cotQ 2891440 .. 2891462 +  -2.6    -5.093   TAAAGAATACCACAA           GGGCCGAA CATCTAT TGCGGTCC           TTTTATTGTTTTAAA  70 38
HCN55_RS15255 2892066 .. 2892102 +  -6.1  -5.80817   AGACGGCTTTATAAG   GATAGATAAGTGCAGG GGAAGG TCTGT-CTTATCTATC    TTTTTTTATATTCAC  93 40
HCN55_RS15260 2893081 .. 2893105 +   -13  -5.50723   ACCGACAACAAAAAA          CCTCAAATCC TAAAT GGATTTGAGG          TTTTTCTTTTGGTAC 100 50
HCN55_RS15325 2902778 .. 2902820 + -18.1  -2.71364   ATGAAAGACCCAGTG TAATCAAAAAGGCGGTGACT GCAT AGTC-CCGCCTTTTTGATTG TCATTACACAGCTGA 100 23
HCN55_RS15400 2920283 .. 2920304 + -13.1    -5.252   CGTTCATAGAAAAAA           GCTTGCAGA TTTC TCTGCAAGC            TTTTTTATCAGCCTC 100 32
HCN55_RS15415 2924306 .. 2924338 +  -8.3  -3.09823   GACTGAGGAATCTCC      TGGTAAGGCGCTCCG TTT TGCAGCGCCGTGCCG      TATACTTTTACGCCC  66 267
        sspI 2925221 .. 2925238 + -10.5   -5.9218   GAATAAGACATGAAA             CCGGGTG ACAG CGCCCGG              TTTTTTTCTTATATA 100 35
HCN55_RS15430 NONE
        glcD NONE
HCN55_RS15440 2929237 .. 2929261 + -13.7  -4.50943   AAACATCATGAGAAA          GCCCAAAACAG ACA TTGTTTTGGGC          TTTTGTGCGTTATTC 100 30
        ysdB 2945172 .. 2945198 +   -16  -4.87665   AAACTCGCAAAAAAA         GCAGAAGAGCGT TAA ACGCTTTTCTGC         TTTTTATAAATCAAA 100 11
HCN55_RS15540 2947775 .. 2947795 + -12.6  -3.41602   CATAAAATAAAAAAA            GCCAAGGC ATTCA GCCTTGGC            TTATCCTCCGATCAG  93 36
HCN55_RS15565 2952526 .. 2952551 +   -12  -5.95449   AGAGAAATAAAAAAA         GCATGATCTC TTCAAT GAGATCATGC          TTTTTTATTTTATTT 100 31
HCN55_RS15615 2963303 .. 2963321 +    -3  -4.07568   GATGGAAAAACGAGA             TCGGCAGG AAG CCTGACAA             TTTTAAAGGAGGAAA  55 10
HCN55_RS15620 2964196 .. 2964216 + -14.1   -5.5208   TTAATGGCCAAAAAA            CACCGTTCA ATA TGAACGGTG            TTTTTTGTATTATGC 100 37
        ytvI 2977586 .. 2977611 + -12.6  -5.68438   TCAGCAAAAATAAAA         CGGCAGCCGT TTTTTC ATGGCTGCCG          TTTTTTATTTGATGA 100 28
        ytrH NONE
        ytrI NONE
HCN55_RS15725 2989194 .. 2989216 +  -8.5  -2.73829   ACAGATGAACACTAA          GAG-AGAGGG TCTC CCCTCTACTC           GTGTTCTTTACATAA  65 26
HCN55_RS15735 2990580 .. 2990608 +  -7.5  -3.96483   GCTGAAAGAGATCAC       GCGTAAGGGGCG CCTGAA CGTCCCTTA-GC        TTCTTTCCATCAGCT  74 20
HCN55_RS15805 3003183 .. 3003208 + -11.9  -3.63968   CTGAAAAAATAAAAA         CCACCTCCTGA TTCA TCAGGAGATGG          TTTCACGGTTTAAAG  90 41
HCN55_RS15875 3015344 .. 3015373 + -18.1   -3.0558   CTTTTTTATAGAAAA       TAAAAGGACAGGC TGCT GCCTGTCCTTTTA        TGATTTCTCATATAC 100 30
        brnQ 3022948 .. 3022969 + -13.7  -4.46212   GTTAATGTCACAGAA           CGCCTGCGT TATT GCGCAGGCG            TTTTGTAATAAAAAA 100 36
        hisJ 3025906 .. 3025926 +  -8.3  -4.99861   AAAATGAGGCAGCGG            CAGCGTTAA ATA TTCACGCTG            TTTTTCTCCTTCCTC  91 208
HCN55_RS15925 3026969 .. 3026993 + -10.1  -6.17669   CGCAGTAATATAAAA          GCCCAAAAC TGATATC GTTTTGGGC          TTTTTTTATTTTATT 100 33
        rpsD 3029648 .. 3029670 + -12.6  -5.63504   TAATCGTTTTAAAAA           CCCCTGCCGC TAT GCGGTCGGGG           TTTTTTTATCGGCTT 100 38
        acuA NONE
HCN55_RS15960 NONE
HCN55_RS15965 3035863 .. 3035882 +  -8.6  -5.25735   GAACAAAGTAAAAAA            CGACCTTT ACGA AGAGGTCG             TTTTTGATTTTTTAA 100 30
HCN55_RS16035 3048503 .. 3048538 +  -4.7  -4.37886   CAGAATAAGAAAAAA    GCTTGTCGATCCGGGC TTACT GCTCGT-TCAACAAGC    TTTTATGAAACCTAC  68 33
HCN55_RS16045 3050121 .. 3050144 + -12.4  -5.60689   ACAAGCAAAAAATAG          AAGCCGCTGC CTAT GCAGCGGCTC           TTTTTTATTATATCG 100 47
HCN55_RS16065 3054148 .. 3054167 +  -9.3  -4.12188   TGCCGTACATGCTCA            GCCAGCT CTCCCA AGCTGGC             TTTTCGACGTAGTGG  80 196
        cysK 3060691 .. 3060726 + -15.6  -4.10161   TGGTCATTTATTTAA    AAAAAGGACTGGCTTC AGCA GAAGCCGGTCCTTTTA     TTTTGCAAGCTCGTA 100 26
        pbuO 3063526 .. 3063545 + -12.2  -5.36441   GGATAGACCAAAAAA            CCCAAACG TCGC CGTTTGGG             TTTTTTATGTAAACA 100 41
HCN55_RS16120 3066020 .. 3066040 + -12.6  -4.94902   TGCTTATAAATAAAA            CCCCGCAT TCGGT ATGCGGGG            TTTTTGTCATGCTTG 100 119
HCN55_RS16135 3069912 .. 3069926 +  -8.5  -3.78124   TGCAGGGCTAAATGC               CGGGC AATAC GCCCG               TTCTTAATCATTACT  74 4
        opuD 3071668 .. 3071693 + -16.3  -5.28942   CATATTAACAAAAAA         GATCTTTCCGC GCCT GCGGAAAGATC          TTTTTATTTGCGATA 100 33
HCN55_RS16190 3082616 .. 3082640 +  -9.4  -4.67556   GAAGCATGTAAAAAA         CCCAAAACCGC TTGC GCG-TTTTGGG          TTTTTCCAATGTTAT  91 30
HCN55_RS16245 NONE
HCN55_RS16250 NONE
HCN55_RS16255 NONE
HCN55_RS16260 NONE
HCN55_RS16265 3099035 .. 3099056 + -10.2  -5.52347   GAATACAAATAAAAA           CTAGGGGA CCGCTC TCCCCTAG            TTTTTTGGTTTTGTT 100 29
HCN55_RS16285 3103883 .. 3103927 + -19.7  -4.12902   TGGATCTTTCAGATT GTTGACAAAATCCTAAAATGG TTT TCATTTTAGGATTTTGTCATC TTTTCAGCGTGATTG 100 61
HCN55_RS16295 3106220 .. 3106238 + -13.2  -5.19879   AACGATAAACAAAAA             GCTCCAGA ATG TCTGGAGC             TTTTTCTGTTTCACA 100 33
HCN55_RS16360 NONE
        mraW 3118383 .. 3118407 +  -9.4  -5.67283   GCCATCGAAAAAAAA          GCTCAGATCA GCAAA TGATTTGAGC          TTTTTTCTTTGAATT 100 8
HCN55_RS16380 3120920 .. 3120941 +  -7.3  -4.00407   AATAACCATCGTTAA           CCCGGAC-GT CAT ACAGTTCGGG           TTTCGATTTTTCCAT  73 88
        pckA 3127974 .. 3128003 + -13.7   -4.4078   CTCGTATAAAAAACA       AAAGCCAAGAGCA ATTA TGCTCTTGGCTTG        TTTTAATTGACGGAA 100 32
HCN55_RS16415 NONE
HCN55_RS16420 NONE
HCN55_RS16425 3131815 .. 3131832 + -12.7   -5.4833   GGAGGACATAAAAAA             CCCGGCA CATG TGCCGGG              TTTTTTATTCAATCC 100 30
        ytzI 3133867 .. 3133881 +  -6.4  -5.58454   TTGGACTTTTAAGGT               CGGCAT GCT ATGCTG               TTTTTTTGCTGTGAC 100 94
        yidD 3135262 .. 3135292 +  -5.5  -3.36694   AACGTTTTCAGGGAA      CAGCGGGTGATGTT TAAT AACATC-TACGCTG       TCTTTCACACTCGCT  56 109
HCN55_RS16475 NONE
HCN55_RS16480 NONE
HCN55_RS16485 3138919 .. 3138945 +   -11  -4.74706   GATTTATAATTAAAA         GAAAGAGCTG CATCAGC CAGCTCTTTC         TTTTTGCATGTTGAG 100 32
HCN55_RS16540 3151579 .. 3151601 + -16.4   -4.4267   ATCTCCACGCTGATT           GAACCCCCAA TTA TTGGGGGTTC           TTTTCCGTTTTCAGC 100 24
HCN55_RS16550 NONE
HCN55_RS16555 NONE
HCN55_RS16560 3156045 .. 3156068 +  -7.4  -5.08824   AAAACATAAAACCTA          CAGCTCGTGT TGCA AAACGGGCTG           TTTTTTCGCTACAGA  90 32
        cotI 3160023 .. 3160039 + -10.8  -4.04579   TTAAGACCATCATTT              CCCCCG CATAT CGGGGG              TTTGATATTTATAAG  89 37
HCN55_RS16585 3160568 .. 3160584 +  -9.4  -4.63527   CTGTGAACAAAAAAA              GCCGCT TATAC AGCGGC              TTTTTCACATCATCG  91 35
        thiT 3176748 .. 3176772 + -17.2   -4.9755   GCGTAAAAGTAACAA          TCCCCCAGCG AATTC CGCTGGGGGA          TTTTTCGTTATCTGT 100 35
HCN55_RS16755 3180029 .. 3180074 + -16.5  -2.95515   ATGAAAGAAATTAAA GAAAAGATAGAAAGGGCCTGAT TTA ATCAGACCCTTTCTG-CTTTTC GTTTGACTTTTCGCT 100 5
        gbsR 3184169 .. 3184186 +  -9.1  -5.58454   AAGTAAAGCAGAAAA             CGCCTGG GAAA CTAGGCG              TTTTTTTGATGTAAC 100 35
        bslA 3184910 .. 3184927 +  -9.1   -5.2696   GCAACTAATGTAAAA             GACCGGT TAAC GCCGGTC              TTTTTTGCGTTTTAC 100 33
        ktrA NONE
        ktrB 3187283 .. 3187321 + -14.2  -3.13475   GTTTACAGGGTGATA  TCA-AAAAAATCCGGCG TGCAGT CGCCGGATTTTTTATGA   TTCGATATGAGATTG 100 28
        cdoA 3191458 .. 3191479 +  -8.8  -4.67234   AATTGACAGAAAAAA           TAAGGCTC GGAAAA GAGCCTTA            TTTTTCGACTTACAT  90 281
        iolU 3194752 .. 3194779 +  -9.9   -5.4505   TCAAGCTTAAAAAAA       TCCGCCCGCGTGC AAAT GC-CGC-GGCGGA        TTTTTTATTAGACAA 100 31
HCN55_RS16880 3210167 .. 3210215 +  -8.8  -3.62864   TGTTCCGTCTCTTTT CCGCATCGTCCGCTAAAAAGCC CCATC GCCTATTTTCCGGACGATGGGG TTTCAAATGCCTTTC  75 10
        mstX NONE
        kbfO 3217000 .. 3217027 +  -9.2  -3.25169   ATGATCGTATTCCCA        GCCGC-CGTTTAT CAC ATAACCGAGCGGC        TTCATCACTTGTTCC  70 331
HCN55_RS16955 3221997 .. 3222020 +   -11  -5.22794   TGCATGAAATCAAAA          GCACCGAACA TTCC TGTCCGGTGC           TTTTTTCATGCTTAT 100 68
HCN55_RS16975 3225265 .. 3225279 +  -7.1  -5.41143   CAAATAACAAAAAAA               CCGGT GCTGA ACCGG               TTTTTTTAAGGCGTG  95 34
        patB 3226809 .. 3226836 +  -7.8  -3.71848   AAATATAGCTGTAAA        CGCCTTTACG TCTTCATT TGTAAAGGCG         TTCTTAATAAAGGAA  72 39
        kinB NONE
        kapB 3228640 .. 3228661 +  -6.6  -5.08824   TTTAACCGGCCATAA           CCCAGTCT GACAAA AGATTGGG            TTTTTTACGTCGCGC  86 26
HCN55_RS17010 NONE
HCN55_RS17015 3232621 .. 3232632 +  -3.6  -3.62597   CATCTGGAAAGGAAC                GCTG CAAG CGGC                 TTATTAAAGGATCGG  52 7
HCN55_RS17020 3233111 .. 3233150 + -22.6  -3.08073   GCCATCACAGATTGT  TGACAAAATCCTAAAACG GCTT CGTTTTAGGATTTTGTCA   TCTATTCAGCGTGAT 100 63
        maeL NONE
        maeM 3236318 .. 3236342 + -12.9  -5.02502   ATATCTATAAGAAAA          CGCACTGCTTG CTT TGAGCAGTGCG          TTTTTCTGTCATATC 100 31
        nupN 3237872 .. 3237898 +  -8.1  -4.82111   TGAATAAGAATCGCA         GGGATAAGG AGGTCGAGC CCTTATCCC         TTGTTTTTCTTTTAT  95 34
        nupO NONE
        nupP NONE
        nupQ 3241478 .. 3241502 +  -6.4  -5.67063   AAAGATAAACATTCT          CCCCTGGGAA GACGA TTCTCAGGGA          TTTTTTTCTAATCCA  93 33
        maeN 3242978 .. 3243000 +  -9.9  -6.08342   CTTCATAAACAGAAA           GAGTTCCGT TTTAT GCGGAACTC           TTTTTTTATTTATTC 100 33
HCN55_RS17070 NONE
HCN55_RS17075 NONE
HCN55_RS17080 NONE
HCN55_RS17085 NONE
HCN55_RS17090 NONE
HCN55_RS17095 NONE
HCN55_RS17100 3249228 .. 3249253 +  -7.6  -6.08342   ATTTATAAAAATAAG         CAGCCGGA CAGGCAGAGT TCCGGCTG          TTTTTTTATTTCTTG 100 33
HCN55_RS17135 3254452 .. 3254475 +  -4.5  -4.40173   ACAAACACCGAAAAA          GACCGCAAC GCTAAA GTTGTGGCC           TTTTCGCTTTGTCAT  66 44
HCN55_RS17140 3255341 .. 3255354 +  -3.9  -4.42386   CAGCATAATGGCCTG               TTGAA TGCT TTCAA                TTTTCTGGCTCAAAC  64 451
HCN55_RS17180 3261076 .. 3261098 +  -2.7  -4.72272   CGCTTAACTGAAAAA          TAGGACGTCC TGTT GTACG-CCTA           TTTTTCATGCGCAAG  65 23
        adeR 3275065 .. 3275094 + -16.7  -6.17669   TATCAAACTTCGGCA       CATGGATTTGTGA AATT TCACAAATCCATG        TTTTTTTATTTTCTT 100 13
         ald 3276326 .. 3276349 + -11.8  -6.04324   CTTAATTCACAATAA          GCTTGCAGAA AGAT TTCTGCAGGC           TTTTTTATTTTTTAA 100 36
HCN55_RS17240 3277115 .. 3277135 + -11.2  -4.74801   CGTAAGATAGAAAAA            GAGACTGC GGCAA GCAGTCTC            TTTTTGATAAGATTA 100 36
HCN55_RS17285 3291768 .. 3291789 +   -13   -4.8048   ATCATAACGAGAAAA           GGCTCCCC AGTAAA GGGGAGCC            TTTTTCCTATAAAAC 100 67
HCN55_RS17300 3295414 .. 3295435 + -11.5  -5.00196   TTCATGTAAAAAAAA           CGCTCCTGC TTTC GCTGGAGCG            TTTTATTCTTTCACC 100 32
HCN55_RS17325 3299447 .. 3299472 + -12.7  -5.63517   TAAATAATAAAAAAA         GGAGCTTGTGTC TGC GACACA-GCTCC         TTTTTTATTTGAAGA 100 34
        guaC 3300888 .. 3300920 + -12.8  -4.51699   TTAATCATAAAAAAA     CGCCAAGTC-AGCGG TTCT CCGCTTGAGTTGGCG      TTTTCTGCTACTTCT 100 37
HCN55_RS17370 3306802 .. 3306820 +   -11  -4.60797   AATGATAGAGAAGAA             CCGCTGAT CAA GTCAGCGG             TTTTCTGTATACCCA  95 39
HCN55_RS17380 3307583 .. 3307609 + -16.7  -5.45652   TCTTTTAATAAAGCA         GCCAGGCTGAT ATTTG ATCAGCCTGGC         TTTTTTATTAGAGAT 100 33
HCN55_RS17410 3314857 .. 3314877 + -12.5  -5.08169   CGGCATACAGAATAA            GGGCACCCT TTT AGGGCGCCC            TTTTTTCAAATGTAT 100 26
HCN55_RS17430 3317153 .. 3317169 + -12.3  -4.22338   TAGGAATGACAAAAA              CGCCAGA TGA TCTGGCG              TTTTGGCATTATGCT  93 16
HCN55_RS17440 3319286 .. 3319327 + -10.3  -6.12458   ATACCAAAAAAAGAA GTAACAAA-AAGCCGCCTCT TCA ACAGGCGGCTTATTTGCTGC TTTTTTCTTTTTTTG 100 22
        pucR 3327235 .. 3327248 +  -2.4  -2.64472   CATTTTCTTACAAAA               CGAA TCGTTT TTCG                TCACTTTCAGCAATC  40 50
        pucJ NONE
        pucK NONE
        pucL NONE
        uraH 3331848 .. 3331872 + -17.2  -4.67234   GGGGGAGTTAAGAAG          GAAGCCCGCC TCACC GGCGGGCTTC          TTTTTGCACTTCAAT 100 30
        yuzJ 3332447 .. 3332473 + -14.6  -3.93383   CCTCCCTGTCCGACA         GACGCCATAAGA AGT TTTTATGGCGTC         TTTGCTATGTGTTCA 100 74
HCN55_RS17545 NONE
HCN55_RS17550 3341839 .. 3341860 + -14.5  -4.91109   TGGCCGTAAGAAAAA           GGTGCTCCT TTTG AGGAGCACC            TTTTTCTAATACACA 100 32
        sspG NONE
HCN55_RS17605 3351347 .. 3351367 + -10.4  -5.20333   AAGAAGAGTAAAAAA           CCGC-GGCC CCTC GGCCAGCGG            TTTTTCTTCTGCATA 100 30
HCN55_RS17715 3369572 .. 3369592 +  -6.1  -3.99805   TGGGACAATCATAAT            GCAGCTG CTTCCCA CGGCTGC            TTTCACTTTTTCAAA  65 27
HCN55_RS17725 NONE
HCN55_RS17730 3371204 .. 3371232 +  -5.4  -5.71712   CAACATTAGTAAAAA       GGATACGATGTTC TTTC GGGCATC-TATCC        TTTTTTTGTGTAAAA  88 41
HCN55_RS17735 NONE
HCN55_RS17740 3373444 .. 3373467 +   -16   -5.4833   CCCATTAATAGAGCA          CCCCGCGGGT ATCA ATCCGCGGGG           TTTTTTATTCAATCA 100 33
HCN55_RS17755 3375622 .. 3375647 +  -7.6  -4.77216   CTGAATCACAAAAAA         GCAGTCTGCT ATAATG AACAGACTGC          TTTTTGGCTATTGTT  88 12
HCN55_RS17780 3380332 .. 3380356 + -10.3  -3.55551   AGCTATTCAGCTGAT          CTAAATTATAA TTA TTATAATTTAG          TATTGATTTTTATTT  82 27
        mrgA 3380889 .. 3380911 +  -9.9  -5.84011   TAGGGTAACAAAAAA           GCTGAACCT TAATC GGGTTCAGC           TTTTTGTTTTTTCTT 100 33
        cssR NONE
        cssS 3384606 .. 3384630 +  -8.7  -5.71712   ATAGCAGTGCCAAAA          TAGACTGTAGA TGT TTTGCAGTCTA          TTTTTTTATGTGAAA 100 23
HCN55_RS17810 3385842 .. 3385876 + -20.2  -3.08327   AACAGCAACATATTT     AGAAGAACGGCTGCTT AAA AAGCAGCCGTTCTTCC     TATTACGCCTTTGGT 100 24
       gerAA NONE
       gerAB NONE
       gerAC 3391560 .. 3391591 +    -5  -4.28049   GGCTCTCCCTTGCTT      GCGGCGCGGATGGC ATCG GCGATTTCTGCCGC       TTTTGAGGTTTTCAA  65 316
HCN55_RS17895 3402492 .. 3402512 + -12.6  -5.96219   TGTAGTATAAAAAAA            CGCATCCG TGTTT CGGATGCG            TTTTTTTTATACGTC 100 36
HCN55_RS17925 NONE
        oxdC 3408488 .. 3408519 + -19.6  -3.14564   AAATAAAAGACTTGC      GGCTTGCAGAGAGC ACTC GTTCTCTGCAAGCC       TTCATAAGGAGCTGA 100 35
        rsiO 3408955 .. 3408979 + -10.8   -5.1356   TCCCAGCTAAAAAAA          GAACGCATTC CAATT GGATGCGTTC          TTTTTATTCATAGCG 100 31
HCN55_RS17970 3416274 .. 3416311 + -15.8  -3.85698   GAAAGCTTGACTAAA   TAAACAAAAGAGCCGC CTGCCC GCGGCTCTTTTGCTTA    TTTATAAGGAACGGC 100 23
HCN55_RS17985 3419092 .. 3419103 +  -4.4  -4.11692   TTTTATATGCTGTTT                CATG GCCG CATG                 TTTTAAACATGAGTG  61 8
HCN55_RS17990 3421068 .. 3421085 +  -9.9  -5.22039   TTCCGAATGAAAAAA             TCCCTCT ATCA AGAGGGA              TTTTTTACGTTTCCA 100 31
        modA NONE
        modB 3423579 .. 3423595 +  -9.4  -5.26875   AACGCACTAAAAAAA              CTCCCC ATAAC GGGGAG              TTTTTTGATTAAAAC 100 31
        yvgO 3425153 .. 3425172 + -10.7  -5.68039   CTTAATATAAAAAAA            GCTGGCG CTCTAA CGCCAGC             TTTTTTTCTGCATTT 100 36
        iolW 3442268 .. 3442289 +   -13  -4.87291   AGCACTAAAACAAAA           GCCTCCCC AAATAA GGGGAGGC            TTTTTCATTAGAATG 100 33
HCN55_RS18135 3453108 .. 3453124 +  -3.5  -5.59655   CATAGGAATAGAAAA              CGCTTGG CTT CCTTGCG              TTTTTTGTTACTTTA  79 36
        rghR NONE
HCN55_RS18150 NONE
        catR 3454806 .. 3454837 +  -3.7  -5.79595   GACTAATTGCTAAAA      TGGTTCTGATCTC AAAGAC GAGAAAAGAACCG       TTTTTTATTTTCCAG  90 35
HCN55_RS18160 3456632 .. 3456650 + -14.6   -5.1764   TTTAAAGAGAAAAAA             GAGGCTGG ACT CCAGCCTC             TTTTTCTATTCTATG 100 36
HCN55_RS18185 3460926 .. 3460949 +  -7.6  -5.09225   CCGAAGCCGTAAAAA          GTTCCCA-AAT TCA ATTCTGGGAAC          TTTTTTAAGTCCAAT  93 29
        sdpA NONE
        sdpB NONE
        sdpC 3463257 .. 3463284 + -18.6  -4.59773   ATCCATTATAATTGA        GTGTCTTGCGGA TTGC TCCGCAAGACAC         TTTTTCAACGTGAAC 100 40
        opcR 3468662 .. 3468687 + -13.4  -4.68593   CGAAAACAAAAGAAT         GCAGCTCTCT AAAATA AGAGAGCTGC          TTTTTGCATCATGAA 100 9
HCN55_RS18245 3470070 .. 3470082 +  -3.5  -3.15699   AGGATTTTGGGGATG                TATTT GAG AAATA                TATTAATAACTAGAT  47 0
HCN55_RS18250 3470924 .. 3470963 +   -21  -3.06831   GTTATATGCTCTTTT  AAAAACAACCCCATCACC TGCT GGTGATGGGGTTGTTTTA   TTGAATAGACGTTAA 100 24
HCN55_RS18260 3473379 .. 3473401 + -10.5  -4.21997   GAAAGCATAAAAAAG           CCGCCGAGA GAAAA TCCCGGCGG           TCTTTTTATTACTTG  90 39
        araR 3483619 .. 3483647 +    -9  -5.65177   GAATGAATAAAAAAA       GCAATGTA-TGGG TCTC CCCGCTACATTGC        TTTTTTTATAGCTGT 100 31
HCN55_RS18315 3486731 .. 3486756 + -19.1  -4.60258   GCACAATAATAAAAA         CCCTCTTGCCG GATG CGGCAAGAGGG          TTTCTTATTTACTGA 100 32
        rsbQ 3497225 .. 3497236 +  -5.8  -3.05384   GGAACGAAAGGGATA                GAGG TGAC CCTC                 TTAGATGGACAAACA  56 45
        rsbP 3498458 .. 3498495 + -11.5  -5.95539   TGTAAAATAAAATGA   TCCATGAGACATAACAA TGAT TTGTTACATCTCATGGA    TTTTTTTGTTTCAGC 100 31
HCN55_RS18410 3509332 .. 3509350 + -10.3  -5.05113   GATTCCTTAAAAAAA             TCCTCCC GTCTA GGGAGGA             TTTTATTTATATCGC 100 31
        yvfG 3510962 .. 3510988 + -11.7  -4.62203   GAGAATCAAAATAAA        CCTTCC-GCTCA CATG TGAGCAGGAAGG         TTTTCCTTCTTTGAG  95 27
        slrR NONE
        pnbA NONE
HCN55_RS18510 3529136 .. 3529167 + -20.4  -5.28414   TCAGCAAAAAGAAAA      CCCGGAAAAGAGAA GTAA TTCTCTTTTCCGGG       TTTTTATGTTTATTA 100 8
        sacB 3534294 .. 3534332 + -14.2  -4.31433   TAACAAATAAAAACG   CAAAAGAAAATGCCGATA TCC TATTGGCATTTTCTTTTA   TTTCTTATCAACATA 100 31
        levB 3535916 .. 3535939 +   -16   -5.7946   ATTCATGAATAAAAA          CAGGGGCGGC GCAG GCTGCCCCTG           TTTTTTTATTAGGAG 100 29
HCN55_RS18545 3537580 .. 3537610 +   -15  -3.90744   ATTGATTATGATAAA       TAAAGAAGCAAGAG GTT TTCTTGCTTCTTTA       TTCTTTACAAACAAA 100 23
HCN55_RS18550 NONE
HCN55_RS18555 NONE
HCN55_RS18560 3539192 .. 3539217 + -11.9  -4.46212   ATTGCCCCATCATTT         TGCTGCATGTC ACAA GACCTGCAGCA          TTTTCTGCTGCCGCG 100 219
        cotR 3542856 .. 3542866 +  -2.6  -3.53031   CGTCAGCACAACTAA                 TTAT ACG ATAA                 TTCCTTTCAAATAAC  48 422
        clpP 3543691 .. 3543716 + -13.4  -5.72207   AAAGTAATAACACAA         CCTGCAAGAG CTGCGT CTCTTGCAGG          TTTTTTTCATTTCAA 100 34
HCN55_RS18640 3556812 .. 3556828 + -11.5  -5.45726   AGCATGCATAAAAAA              GCGGCCG CGA TGGCCGC              TTTTTTTAACCTGTG 100 30
HCN55_RS18655 3560407 .. 3560428 + -14.5  -3.93782   TCAATAAATCAAAAA           TCCGGTCTG ATAA CAGACCGGA            TTTCATATTACATAC 100 34
HCN55_RS18680 3565353 .. 3565373 + -11.2  -4.19238   TGTTCATAAGAAAAA            GCTTGCAG ATAAC CTGCAAGC            TTTTCACGTTACAAA  90 32
HCN55_RS18790 3587335 .. 3587345 +  -3.2  -4.98255   AATTGTCTTTACTTT                 CAGG CTG TCTG                 TTTTTATGATTAAAG  70 142
HCN55_RS18795 3588132 .. 3588155 + -12.5   -4.7889   ATTTTAACAAAAAAA          GTCCGCTGA TGTTAT TCAGCGGAC           TTTTTCAATCTTTCT 100 34
        nagA NONE
        nagB NONE
        nagR 3594850 .. 3594862 +  -3.4  -2.87501   ACCGTTATACATTTG                TCCA CTATA TGGA                TCGTCTTTCATAAAA  44 0
HCN55_RS18845 3599408 .. 3599429 + -10.1  -2.82407   ATATATGTAAAAAGA           GTCTCACCC GCAT GGGAGAGAC            CTTTGGAATTCTATT  75 31
        pchR NONE
HCN55_RS18865 3603594 .. 3603611 +  -9.1  -6.32976   ACCACATGTAAAAAA             GCTGCCT TTGC GGGCAGC              TTTTTTTATTTTTTT 100 30
HCN55_RS18890 3606145 .. 3606163 +  -5.4  -2.75891   CAATATCTTGCCTTT             TTTGTTTT GAA AAAACAAG             TGATTCCCTGGCTGT  52 94
HCN55_RS18915 3615161 .. 3615200 +  -6.4  -3.16564   CGTCCCCCTCTTTCT  TATACAAGCGGGGCGGGT GTAT ACTTGTCCTGCCAGTATA   TTCGTGAGGTGAAAC  61 43
HCN55_RS18920 NONE
HCN55_RS18925 3617159 .. 3617198 + -15.7  -4.46212   CTCAGCGTAACACAA  AACAGCCCGGCATCGCA TCATCC TGCGGTGCCGGGCTGCC   TTTTATGATCCCGAA 100 31
HCN55_RS19080 NONE
        tagV 3645440 .. 3645466 + -15.2  -4.56597   CATCCTATTAAAAAA         TGCCCGGTCCTT TTA GAGGATCGGGCA         TTTTTGCGCAGAAAA 100 30
        lytR 3661064 .. 3661090 + -13.8  -5.65927   AAAGTAAAACAAAAA         GAAGCTTCGCAC AAT GTGCAAAGCTTC         TTTTTTATTTGCCTG 100 34
        galU 3663369 .. 3663394 +   -12  -5.95539   AAATCTAAACAAAAA         GGCTATTGGA CATTCA TCCAATAGCC          TTTTTTTATTTCAAC 100 33
HCN55_RS19165 3663905 .. 3663925 +  -2.6   -2.6732   ACCTGCCATAATACA            CCAAAATA ATTGA TTTTTTGG            ATCTTTCGGTTAAAG  41 17
HCN55_RS19195 3670389 .. 3670414 +   -12  -5.95539   AAATCTAAACAAAAA         GGCTATTGGA CATTCA TCCAATAGCC          TTTTTTTATTTCAAC 100 33
        tagA NONE
        tagB 3680180 .. 3680208 +  -6.9  -5.48063   AATAAGCTAAATGAT       GA-CACTTGTTC AAAACA GAACAAGTGTTC        TTTTTTCTATTGAAT 100 31
HCN55_RS19235 3681631 .. 3681661 +   -20  -3.65426   GGTGTGATAATCAAA       TAGGCTGTAGCTAT TTA ATAGCTACAGCCTA       TTTGCAACTTTCTAA 100 34
       gerBA NONE
       gerBB NONE
       gerBC 3689363 .. 3689384 +   -13  -5.47159   AGTAAGCAATCAAAA           GGGTGCGC ATGATC GCGCACCC            TTTTTTATGTTCCGA 100 36
        tagT 3692068 .. 3692091 + -18.2  -4.32903   TAGGTGTATAATGAA          CGGGATGGCG ATTA CGCCATCCCG           TTTTACATATTTCCT 100 30
HCN55_RS19275 3693086 .. 3693104 +  -9.6  -5.62288   TATGCATAAAGAAAA             GACTCCAG AGA TTGGAGTC             TTTTTCTTTTATTGC 100 32
HCN55_RS19305 NONE
        rbsK NONE
        rbsD 3700499 .. 3700510 +  -5.8  -3.14587   ATATGCCAACTGCAT                CCTG CAGG CAGG                 TGTACTTTTCTAGAA  58 1
        rbsA NONE
        rbsC NONE
        rbsB NONE
HCN55_RS19335 3704539 .. 3704574 + -17.8  -3.46205   ACATGACAAAATAAC    TGAGAGGGATTCCGCA TAAA TGCGGAATCCCTTTTA     TTATGAATTGATTTG 100 27
HCN55_RS19340 3704995 .. 3705026 + -11.7  -4.07568   GGATTTTTAAACAAA      TACAGCCCTG-CCG TATGT TGGACAGGGCTGTA      TTTTAAACAAAAGGC  91 31
        alsR 3709251 .. 3709275 +  -2.2  -2.86023   AACTAAAGAGAGTGA          TGCAGGTA CATGAACAA TACTTGCA          ATCTCTTTTTTCTTT  41 13
HCN55_RS19365 3710822 .. 3710847 +  -6.9  -4.54047   GTATGAAACGAAAAA         CTGCCTTCT GCTTTTCA AGAGGGCAG          TTTTGTATACACTAG  81 45
        cotG 3714704 .. 3714732 +    -6  -5.95539   TTTTCATTGTTTCAA       TAGGCTGCCG-GC GGAG GTACGGAAGCCTA        TTTTTTTATTTGCCC  93 47
HCN55_RS19390 3715567 .. 3715594 + -14.2  -4.39002   AAATATCAAAAAAAA        GAACACCCAGAG CAAG CTCGGGGTGTTC         TTTTATGAAACGTTT 100 119
HCN55_RS19395 3716292 .. 3716308 +  -5.8  -3.50393   GCCGTCTGGGTCTGC             GGCTGGC CTTC GCC-GCC              TTGTGTGCCGTACAG  57 331
        chrS NONE
        chrB NONE
        chrA 3719405 .. 3719420 +    -9  -5.79595   TATTTATAGAAAAAA              GCACCT GGAC AGGTGC               TTTTTTATTTTAGCC 100 32
HCN55_RS19430 3721602 .. 3721617 +  -6.8  -2.98072   AGAAAAAAAGCCGCA              TGGGTG GCAA CGCCCA               TATGATTGTAATGCA  56 435
HCN55_RS19495 NONE
HCN55_RS19500 3735089 .. 3735109 + -15.5  -5.17576   ATCATGACTAAAAAA            GCTGGCTCT AAA AGAGCCAGC            TTTTTTCCGTTCATA 100 40
HCN55_RS19525 3738531 .. 3738565 + -18.8  -3.33483   AGATATGTTCTGCAT     GAAAAAAGCTGCCGTT TTG AACGGCAGCTTTTCTC     TTCGTGCTTTCACTC 100 107
HCN55_RS19540 3740099 .. 3740119 +  -9.7   -5.4505   ATTGAGATAAAAAAA            GACGCCGTT TCT AACGGCATC            TTTTTTATTCCGGCG 100 47
        rapD 3742673 .. 3742683 +  -2.4  -3.59979   CGTTCTCATCAAGTA                 CGGG ATA CCCA                 TTTCCAGTGACGAGC  49 428
HCN55_RS19585 NONE
HCN55_RS19590 3747542 .. 3747565 + -18.2  -5.15969   CAGAATAACTTGTCA          GACTGCCGGG AAAT CCCGGCAGTC           TTTTTTCCATTAAAA 100 33
HCN55_RS19620 NONE
HCN55_RS19625 3755233 .. 3755255 + -12.8  -5.60993   CTTTAATATCGGTAC           GAGATTCGGA CAC TCCGGATCTC           TTTTTTTGTGCACAG 100 35
HCN55_RS19630 3755997 .. 3756024 +  -9.2  -4.05181   CTAAGAAAGACAAAA        GCCGGC-GTCT GAAATCA AGACAGCCGGC        TTTAATATTTCTCAT  85 37
HCN55_RS19645 NONE
HCN55_RS19650 3758574 .. 3758604 +  -9.1  -4.07285   GATGAGACAGGACAG      GGCATGAGTTCCAT ATAA ACGGAAC-CATGCC       TATTTTATTTGACTA  81 42
HCN55_RS19655 3758977 .. 3759001 +  -2.2  -5.25805   TCGCTCTTTTTGATC         CTGTTCAGCAT ATAG ATG-TGAACCG          TTTTTTGGATTTGTT  74 155
         cls 3760980 .. 3761002 + -17.7  -4.32034   TATAAGATGCGTAAA           CCCCCGGCC TTTAC GGCCGGGGG           TTTTCCTGATGGTCA 100 36
HCN55_RS19675 3762301 .. 3762318 + -12.7  -5.64873   TATTAATGAGAAAAA             CCCGGAG CTGG CTCCGGG              TTTTTTATTATTCCG 100 35
HCN55_RS19780 3777900 .. 3777920 +  -9.8  -5.72254   GCGTTCATAAAAAAA            TCCTTCTC ATAAA GAGAAGGA            TTTTTTCTTATTTCC 100 31
HCN55_RS19875 3792703 .. 3792721 + -13.2   -5.4505   TTTACTGCAAAAAAA             GGAAGCCT AAG AGGCTTCC             TTTTTTATTAAAACA 100 16
HCN55_RS19895 NONE
        racA 3796211 .. 3796227 + -12.3   -5.7946   AACCTAAAGCAAAAA              GCTCCCT TAA AGGGAGC              TTTTTTTGTTACGCA 100 34
HCN55_RS19960 3807515 .. 3807544 +  -5.8  -5.57396   GAAACAAATAAAAAA       GACTTGCCCGCTT TTGAC AAAC-GGCAAGTC       TTTTTTATTACTTCT  91 70
         cls NONE
        uvsE NONE
HCN55_RS19995 3816053 .. 3816072 + -10.8   -5.2291   CTTACATACAAAAAA            GGATAGAC ATCT GTCTATCC             TTTTTCTTATGCTCT 100 41
HCN55_RS20045 3828345 .. 3828364 + -10.8  -5.47821   CACAAGGTAAAAAAA            CAAGGACA CCGC TGTCCTTG             TTTTTTTCAGTCAAT 100 31
HCN55_RS20070 NONE
        sboX NONE
        albA NONE
        albB NONE
HCN55_RS20090 NONE
        albD NONE
HCN55_RS20100 NONE
HCN55_RS20105 NONE
        albG 3840290 .. 3840302 +  -6.3  -3.86897   CTGGGAAATTCAAAT                GTATC TAT GATAC                TTTCTACCAACTGCC  66 461
        rapF NONE
        phrF 3844109 .. 3844125 + -10.8  -5.15634   CGAGGAATGATTTAA              CCGCCG TCCAT CGGCGG              TTTTTTCGTCCCCTC 100 26
HCN55_RS20140 3844686 .. 3844706 + -14.1  -4.14764   CTGGGAATAAAAAAA            CATCCAGAC ATC GTCTGGATG            TTTACTTATTTCACA 100 31
HCN55_RS20155 3848756 .. 3848782 +   -13  -3.33762   CGACATCATTGAAAA         TAACCCGGCTCC TCG GAGGCCGGGTTA         TTCGTATGGTTCCTT  93 29
HCN55_RS20170 3850544 .. 3850564 +  -9.6  -4.79955   AATAATCTCTATAAA            GCCGGCGC TTCGC GCACCGGC            TTTTATTATCCCTAT 100 36
        rsfA 3859083 .. 3859108 + -12.7  -4.13014   AATGACATAGAAAAA         TCCCAAAACGG GCAG CTGTTTTGGGA          TTTTCGCCATGTGCA  95 36
HCN55_RS20235 3864226 .. 3864247 +   -13  -4.78752   TATGTATAATATCCC           CTCCCGCC CTATCC GGCGGGAG            TTTTTCAATTCTCCT 100 32
        bacG 3865135 .. 3865156 + -14.5  -4.35483   AAAAGCATATAAAAA           CATCCCGCT TTTT AGCGGGATG            TTTCTTGTAATGACC 100 29
        gerQ 3890853 .. 3890880 + -12.2  -5.72622   CAAGATAAGAAAAAA        GCCAATCACTCAT ATG ATGAG-GATTGGC        TTTTTTGTTTATAGA 100 33
HCN55_RS20380 3894524 .. 3894540 +  -9.4  -4.60889   TACTCAAATAAAAAA              GCGCAG ATCAC CTGCGC              TTTTTACAAATCCTT  91 30
HCN55_RS20410 3898644 .. 3898668 + -13.6  -4.65895   CAATCATAAAAAAAG          GGGCTGCCTT ACAGA GAGGCAGCCC          TTTTTAAATCACCGA 100 32
HCN55_RS20430 3903430 .. 3903448 +  -8.8  -3.00046   CTCTTTTACATGTCC             GATCGCCC ACA GGCCGATC             TCATATTCTTTTTTA  66 493
         vpr 3907130 .. 3907150 + -18.3  -4.60041   GTTGAATAAGAAAAA            GCCCTGCCG ATT CGGCAGGGC            TTTTTAAAGATCAGT 100 32
        ywcE 3911145 .. 3911164 + -12.2  -5.55695   GAAGACAGCAAAAAA            CCCTCTTC CACT GAAGAGGG             TTTTTTGTATTATTC 100 39
HCN55_RS20490 3915891 .. 3915916 + -15.5  -4.67048   GGATAAAAGCAGCAG         CACCCGAAGCG TCAG CGCTTTGGGTG          TTTGTTTTGCCATAA 100 35
        slrA 3920473 .. 3920487 +  -8.6  -3.03243   CTACGACAGACAGCC               GGTGAT GCG ATCACC               TCTTGGCACATGCAT  70 162
HCN55_RS20520 3921079 .. 3921096 +  -4.1  -4.02946   GATCTGAAGGGTGAA             CAGACAT GAAT ATGACTG              CTTTTTTATTATTTT  58 17
HCN55_RS20525 3922631 .. 3922648 +    -7  -4.97312   ACAGGAATAAAAAAA             GCTCTC TTTATC GAGAGC              TTTTTCCTTACTTTT  85 31
HCN55_RS20565 NONE
HCN55_RS20570 3931118 .. 3931135 +  -7.7   -6.0427   CATTTATGTAAAAAA             CTGTCCT CTCG AGGGCAG              TTTTTTTTATGTGCT 100 30
HCN55_RS20575 NONE
HCN55_RS20580 3932654 .. 3932674 +  -9.7  -5.10004   TCTACATAAAAAAAA            GCTGCCC CTGAACA GGGCAGC            TTTTTCATTATTTTT 100 32
        glxA 3934381 .. 3934406 + -11.3   -5.4251   AGCGGTAAAAATAAA         GAACGTACATT TTGT GATGTACGTTC          TTTTTTATCTATACC 100 33
         epr 3938672 .. 3938702 + -12.1  -5.68023   AAAAGTAACCAAAAA       CCTTTAAGATTTG CATTC CAAGTCTTAAAGG       TTTTTTTCATTCTAA 100 33
        sacX NONE
HCN55_RS20615 3941381 .. 3941403 + -10.7  -5.75478   GAGACAAACAAAAAA           CGCTTTTGA TCATC TCAAAAGCG           TTTTTTTATCTGATT 100 39
        ywaE 3943959 .. 3943986 +  -9.9  -5.59879   GGTACCGCGTGCATT        GAGCCACGTCCC TTATT GGGATG-GGCTC        TTTTTTGTGTTTGTA 100 217
HCN55_RS20635 3945273 .. 3945298 +  -7.7  -5.42862   TCTGATATTCCGAAA         CGCTTATGA CCCTTCAT TCATAAGCG          TTTTTTTGCAGGTAT 100 41
        ywaD 3946786 .. 3946805 + -13.6  -5.16237   TATCAAATAAAAAAA            GACGGCAC TTGG GTGCCGTC             TTTTTTAATCCACTT 100 31
HCN55_RS20660 NONE
        dltA NONE
        dltB NONE
        dltC NONE
        dltD NONE
HCN55_RS20685 3954096 .. 3954118 + -12.1  -5.22312   CGAGCAAATGAACAC           GCAGGAGAA TTAAT TTCTCCTGC           TTTTTTCATATGAAT 100 13
HCN55_RS20690 3955348 .. 3955368 + -11.1  -5.47399   GCAAGTAAGAAAAAA            GCCGGCC CATTACA GGCCGGC            TTTTTTTACGCTTCA 100 33
HCN55_RS20730 3963509 .. 3963530 + -10.9  -6.23317   ATTAACAACAGCGAA           CAGGGCTTT TTTA GAAGCCCTG            TTTTTTTATTTTTCT 100 36
HCN55_RS20735 NONE
HCN55_RS20770 3969276 .. 3969298 + -12.1  -5.37345   GGGGTATCAAGAAAA           GCTGTCTTC TCTCT GAAGACAGC           TTTTTTATCATTCAA 100 10
        cimH 3977973 .. 3978002 + -10.9   -5.1287   TATTGATCCCCGCAA       GCAAGTTC-TTCGT CAA ACGAAAGAGCTTGC       TTTTTTGCATGTCCA 100 35
HCN55_RS20805 NONE
HCN55_RS20810 3980020 .. 3980039 + -12.1  -6.01187   TGTGGCGGCGGAGGG            GGCGGCG ATTAAA CGCCGCC             TTTTTTTATTTCATT 100 14
HCN55_RS20830 3984753 .. 3984777 + -10.1   -5.5454   TTCTAAATGAAAAAA          TCCCTCTGT TTCAAGT ACAGAGGGA          TTTTTCTTTATTTAG 100 35
HCN55_RS20840 3986739 .. 3986764 + -17.7  -3.90744   TCAAATAACAGCTAA         CAAGGGTGCCT GTTT AGGCACCCTTG          TTCTTTAAAAAAGGC 100 33
HCN55_RS20855 3989462 .. 3989477 +    -4  -2.86291   TATAGAGCTGAAAAA              TCAATC TGCC GGTTGA               CGTTTTTCTTTCCTA  46 36
HCN55_RS20860 NONE
        yxjM NONE
        yxjL NONE
        pepT 3993174 .. 3993195 + -11.6  -5.36441   AGCATAACGCCAAAA           GCCAGTCC AAAAAA GGACTGGC            TTTTTTGTGTGAAAA 100 34
HCN55_RS20880 3993971 .. 3993990 +  -8.6  -4.26634   TATTTCAAACGAAAA            GGCTGC-TG AAT CACGCAGCC            TTTTAAAATTGTTTT  83 46
HCN55_RS20885 3994758 .. 3994782 +   -13   -4.7078   GATTTGATCGTTCAA          GCTCTTCCTT ACACA AAGGAAGAGC          TTTTTACATGCTTAA 100 216
HCN55_RS20890 3996147 .. 3996171 +   -13  -5.56264   GAGATTGTCACGCAA          GCTCTTCCTT ATCCA AAGGAAGAGC          TTTTTTATATTTGAA 100 217
HCN55_RS20895 3997358 .. 3997387 +    -8  -5.42131   AAGCAAAGAAAAAAA       CACACTTGATTCC CTAGC GGAG-CAAGTGTG       TTTTTTATGTCATTG  95 39
HCN55_RS20925 4003811 .. 4003838 + -14.3   -4.5774   TGTGGTAGAAACATT        GAGCCATATCC CTTTTC GGATATGGCTC         TTTTCATTATTGATA 100 33
        citN 4008661 .. 4008685 + -11.5  -3.71917   TCATTACAATCATAA          GAGCCTGCT ATATTGC AGCAGGCTC          TTTCACATTTGGCAT  91 144
HCN55_RS20965 4012811 .. 4012840 + -10.1  -3.37654   CAGCCAGCAGCAAAA       TGACCTGC-CCC TTTAACT GGGAGCAGGTCA       TTCATCATTTATTCG  78 10
        hutP 4038823 .. 4038861 + -10.5  -4.96848   GATCTTAGACGATAG  GGGGCTATGC-GTGAA AACAGAAG TTCACAGCATAGCTCC   TTTTTGTATGGGCGC 100 52
        hutH NONE
        hutU NONE
        hutI NONE
HCN55_RS21110 NONE
HCN55_RS21115 4045828 .. 4045862 +    -5  -5.60689   ACATCCTATAATTAA     AAAAGCACACCCCG CTCAGCA TGGGATGTGCTTTA     TTTTTTATTCTGTAA  88 30
       cotNE 4062987 .. 4063002 +  -2.6  -4.78077   GGAAAATAATTGTAG              TTCC-TC TTT GACGGAA              TTTCTTTTCATTCAA  65 192
HCN55_RS21215 4063432 .. 4063456 + -10.1  -5.85737   AGTAACATATAAAAA          GCTCAACAC AATGCGA GTGTTGAGC          TTTTTTTCTTACTGT 100 36
HCN55_RS21225 4065012 .. 4065035 + -10.3  -5.37345   TAAAAAATAAAAAAA          CGGCACAGT CATGAC GCTGTGCCG           TTTTTTATGATTCAC 100 31
        iolR NONE
HCN55_RS21310 4083407 .. 4083431 + -18.7    -5.626   CGCATAAGAAGAAAA          CAGCCTTCTCC AAT GGAGAAGGCTG          TTTTTTTGTGCGATA 100 34
HCN55_RS21315 NONE
HCN55_RS21320 4084639 .. 4084659 +  -7.6   -5.5943   AATGTCTTAATCAAA            CCTTACTC CGCGC GGGTAAGG            TTTTTTTAATGGTTT 100 42
HCN55_RS21325 4086251 .. 4086277 + -15.3  -5.19879   TACATTATAAAAAAA         GGAATCGTCTC CTTAT GAGACGATTCC         TTTTTCTGTTTACAC 100 31
HCN55_RS21340 4089525 .. 4089542 + -11.3  -5.28983   GAAGAAACGAAATAA             GAGAGGG AGCC CCCTCTC              TTTTTGTCTTTTAAA 100 26
HCN55_RS21350 4092190 .. 4092211 + -10.9  -4.79352   ATCGCATGATCAAAA           GGCGCTTCCT TAG AGGA-GCGCC           TTTTATTGTAACTCC 100 40
HCN55_RS21365 NONE
HCN55_RS21370 NONE
HCN55_RS21375 NONE
        asnB NONE
HCN55_RS21385 4099243 .. 4099271 + -14.8  -2.85947   TTTGTATCACAGTAA        GAAGACCTTCTT ATTAA AAGAAGGTCTTC        TGCTATTCTATTCAG 100 45
HCN55_RS21400 4101762 .. 4101797 +   -12  -4.88918   TGTATAAATAATAGA    AAAAAGTCTAGACGCC AATA GGCATCTAGACTTTTG     TTTTCTTTGCAATAG 100 30
HCN55_RS21420 4106006 .. 4106031 +  -3.4  -4.66953   TGACCATAAGAAAAA        CCCATGCTGTTC CAGC GAAC--CATGGG         TTTTTCAGCTGTTAA  64 45
HCN55_RS21430 NONE
HCN55_RS21435 4107776 .. 4107798 + -10.6  -4.98531   TATTTAACAAAGAAA           GACTGCCC CGGGGGA GGGCAGTC           TTTTTCGTTTAAGAA 100 34
        gntR NONE
        gntK 4112560 .. 4112573 +  -6.7  -2.54687   TGACATGAAGGGGAG               GGCAT TACC ATGCC                GTTAATCATCGTTGC  57 45
        gntP NONE
         gnd 4115358 .. 4115382 +  -9.4   -5.9218   AACCTGTATTAAAAA         CACGG-TCAGT TTCA ACTGAACCGTG          TTTTTTTCTTCTATC 100 39
        ahpC NONE
        ahpF 4117924 .. 4117956 + -15.7  -5.69262   AACTAATATAAGAAA      TCCGCTATATTGCCA GAT TGGCAGGATAGCGGA      TTTTTCTTTTTCTAC 100 35
HCN55_RS21490 NONE
HCN55_RS21495 4121049 .. 4121069 + -12.7  -2.75825   AGGTGCACATAAAAA            GCTACTTCA TTG TGAAGTAGC            TCCCTTTATTAAAGG  86 127
HCN55_RS21525 4127397 .. 4127417 +  -8.3  -3.04242   TAAAACAGGTTAAAA            GGAAGTTCT ATA AGAACTCCC            TAGTTTAATATTATT  67 520
HCN55_RS21555 4132624 .. 4132647 + -13.2  -5.54338   ATTACCAGCAATAAA          GCCGG-CGTTC TGA GAACGTCCGGC          TTTTTCTTTTACTTC 100 27
        rapG NONE
HCN55_RS21595 4138341 .. 4138359 + -13.8  -3.27525   TGGATAAATGAAAAA             CCCCCGCG GGA TGCGGGGG             TTCAATTTAACGAAA 100 34
        rocR 4144351 .. 4144375 + -10.7  -5.83822   TATATCCTTTTTCAA          CTGAACGGGCG TGA CCCCTGTTCAG          TTTTTTTTGCATATC 100 386
HCN55_RS21700 4156075 .. 4156092 +  -9.1  -5.06103   TTTAATGAATGAAAG             CCTTCGC TGCA GCGAGGG              TTTTTTAGCGGTTAT 100 36
HCN55_RS21710 NONE
HCN55_RS21715 4157859 .. 4157877 +  -8.1  -5.65927   GAAATTCAGCATAAA             GCGGGGA AGATA TCTCCGC             TTTTTTCTTTGAATA 100 27
HCN55_RS21720 4160020 .. 4160053 + -15.5   -3.1315   TATCTCGTGGAATAA     AAAAAGAGGCTTGGA TGAA TCCAAGCCTCTTTTC      TATTAAGCTTCTTCT 100 26
        cotF 4164457 .. 4164481 + -14.4  -3.58864   AATGAAATAAAACAA          GCAGCAAAGG AGTTC CCTTTGCTGC          TATTTCTGCTGATCC 100 31
HCN55_RS21755 4165980 .. 4166037 + -18.1  -3.50047   TGTCTTAACAGACGC AATGGCTGAATAAGCAAAAAGCATCCCG CGT CGGGATGCTTTTT-CTTATTCACCCAGC TTCTCAATTTGTCCC 100 13
HCN55_RS21770 4168225 .. 4168244 + -13.6  -2.66272   AGAACATGAAAAAGA            GAGCTGCC AGTT GGCAGCTC             TCCCTTTACATCAAA  93 39
HCN55_RS21785 4170466 .. 4170490 +  -8.8  -5.50774   GAAAAAAATTTAGAA          TGATAATCTT TTTAT AAGATTATCA          TTTTTATTTATTCTA 100 81
HCN55_RS21790 NONE
HCN55_RS21795 NONE
HCN55_RS21800 NONE
HCN55_RS21805 4173716 .. 4173737 +  -8.8  -4.87665   TTAAACTGGAATAAA           GAGTGCTT GCTGAA AAGCACTC            TTTTTCTGCATCGAA 100 356
HCN55_RS21825 4175995 .. 4176011 +  -5.1   -5.1861   ATTGGAAATAAAAAA              GGACC CGCTAAC GGTCC              TTTTTTACTGATCAA  79 30
HCN55_RS21835 NONE
HCN55_RS21840 4178789 .. 4178799 +    -4  -3.30443   TGTCACTTATGAGCA                 TGAA CGG TTCA                 TTGGTATACTAATCA  50 55
HCN55_RS21845 4179399 .. 4179414 +  -4.6  -5.93252   CCGCAAAAGCCTCTG              CGGCAG GCAG CTGCCA               TTTTTTCTTTTTGGG  91 103
HCN55_RS21865 NONE
HCN55_RS21870 4181915 .. 4181933 +  -4.6  -3.35679   TATCAAAGAATAGAA             GAGGTT ATTAAGA AACCTC             TTCTCGATCCAAAAA  53 15
HCN55_RS21880 NONE
HCN55_RS21885 4184080 .. 4184106 + -13.1  -3.31269   TCTTATTGAACTAAA         GGGGAATCCAT AAATA ATGGGTTCCCC         TTAATATACTATGGA  95 71
HCN55_RS21905 4186559 .. 4186587 +  -2.4  -6.01187   ATTCATTTTCTAAAA       CCTGTAATC-CGT AACC ACGCGGTAGCAGG        TTTTTTTATTTGCTT  87 79
HCN55_RS21910 NONE
HCN55_RS21915 4188002 .. 4188012 +  -2.6  -3.13788   AGAAATAGGGAGTAT                 TTTT GAG AAAA                 TGTGTTAAGTTAAAT  45 41
HCN55_RS21920 4190110 .. 4190143 +  -8.9  -5.10877   GCGATCCACACATTA     ATAAGCAGCAGGGAT TAAG ACCCTTGCTGCTTAC      TTTTTGATTTCTTAT 100 8
HCN55_RS21930 4192610 .. 4192632 + -13.5  -2.92246   ACAGATTTAAAAAAG           TCAGTGCGG ATCTG CCGCACTGA           TCTCATTACAATTGC  90 31
        yyaC 4202386 .. 4202406 +  -5.5  -5.42514   CATATAAAATAAAAA            CCATCTT CGTTTGA AAGATGG            TTTTTTCATTTATGA  86 34
HCN55_RS22005 4204732 .. 4204754 + -13.5  -4.01088   TTAAAAATATAAAAA           GCTCTCCTG CTTTT CAGGAGAGC           TTCTATTTTGGTATG 100 51
        rpmH 4212092 .. 4212115 -  -8.9  -5.11033   CATAACGTGAAAAAA          GACCACTGA CATTAT TCAGTGGCC           TAAGCTGATAATACT 100 25
        rnpA 4211509 .. 4211520 -    -3  -2.75844   TCTTTTATTGCAAAG                CATA CTTG TATG                 TATTTTAGCATCTTT  42 118
        yidC NONE
HCN55_RS22030 4210025 .. 4210052 - -11.4  -5.71712   TCGGATACAAAAAAA        CCGAAATCCAAT TTTT ATCGGACTTCGG         TTTTATGCTATCTTT 100 33
        mnmE NONE
        mnmG NONE
        rsmG NONE
         noc 4204732 .. 4204754 - -13.5  -5.36364   TTAAAAATATAAAAA           GCTCTCCTG CTTTT CAGGAGAGC           TTCTATTTTGGTATG 100 28
         soj NONE
       spo0J 4202386 .. 4202406 -  -6.2  -5.58522   CATATAAAATAAAAA            CCATCTTC GTTTG AAAGATGG            TTTTTTCATTTATGA  91 35
HCN55_RS21985 NONE
HCN55_RS21980 NONE
HCN55_RS21975 4197886 .. 4197918 -  -7.1  -4.13945   AGGTTCACTGGAAAA      GACAAGCTGACAA AAAAGCA TTTTCAGCTTGCC      AATCCCTTTGATTAT  73 37
        ychF 4196643 .. 4196653 -  -2.6  -3.27476   ATGGGCAAGGAGCAA                 TAAT TCT ATTA                 CTCACAATTTTATAT  45 75
HCN55_RS21965 NONE
         ssb 4195753 .. 4195767 -  -4.2  -2.69433   TAATCACATTAGAAT               GGAAGA TCA TCATCC               GAGATGTCAATCGGT  47 4
        rpsR 4195424 .. 4195449 - -14.1  -5.24129   CCCCCCTATAAAAAA         GAGCAAGAACC CGAA GGTCCTTGCTC          TTTACATATCAGCTT 100 39
         xth 4194608 .. 4194632 -  -5.8  -5.71712   TTTCATATAAAAAAA          GCAGTAAG TGTAAAATC CTTACTGC          TATCTCATCATATAT  91 33
        ccpB 4193630 .. 4193643 -  -3.9  -2.61602   TGAAGTTATAAGGTA               TGAAA TGCA TTTCA                GTTCAAGCTTTTTTC  45 28
HCN55_RS21940 NONE
HCN55_RS21935 4192609 .. 4192633 -   -10  -5.15381   AACAGATTTAAAAAA          GTCAGTGCGG ATCTG CCGCACTGAT          CTCATTACAATTGCT 100 30
HCN55_RS21925 4190111 .. 4190142 - -12.4  -3.32993   CGATCCACACATTAA      TAAGCAGCAGGGAT TAAG ACCCTTGCTGCTTA       CTTTTTGATTTCTTA  89 7
HCN55_RS21900 NONE
      tet(L) 4184496 .. 4184530 -  -6.6  -5.26316   TCATTTTACAAAAAA     GGATCAACCTTG AATTACTTTCA CAAGATTGATCC     TTTCACTCATTTAGC  91 36
        satA 4181912 .. 4181936 -  -8.7  -3.59252   TCTTATCAAAGAATA          GAAGAGGTT ATTAAGA AACCTCTTC          TCGATCCAAAAAACG  75 109
HCN55_RS21860 4180167 .. 4180179 -  -4.1  -2.94888   AATTCACGCAAACCA                TCTCC TGT GGAAA                TTTTTTGATAGTTTT  47 151
HCN55_RS21855 4179330 .. 4179352 -  -9.9  -4.81359   AATTTAAATAGAAAA           GGAGTGAGC CTGAC ACTCACTCC           TTTTGCTCATGAATC 100 169
HCN55_RS21830 4175995 .. 4176011 -  -5.1  -5.64421   ATTGGAAATAAAAAA              GGACC CGCTAAC GGTCC              TTTTTTACTGATCAA  88 37
HCN55_RS21820 NONE
HCN55_RS21815 4173716 .. 4173737 -  -8.8  -4.23104   TTAAACTGGAATAAA           GAGTGCTT GCTGAA AAGCACTC            TTTTTCTGCATCGAA  83 48
HCN55_RS21775 4168223 .. 4168246 - -16.8   -4.9181   ATAGAACATGAAAAA          GAGAGCTGCC AGTT GGCAGCTCTC           CCTTTACATCAAAGA 100 34
HCN55_RS21765 NONE
HCN55_RS21760 4165982 .. 4166035 - -25.1  -3.19175   TCTTAACAGACGCAA TGGCTGAATAAGCAAAAAGCATCCCG CGT CGGGATGCTTTTT-CTTATTCACCCA GCTTCTCAATTTGTC 100 15
        hypR 4164454 .. 4164484 -    -9  -4.99947   TTCAATGAAATAAAA       CAAGCAGCAAAGGA GTT CCCTTTGCTGCTAT       TTCTGCTGATCCTTC 100 22
HCN55_RS21740 4163644 .. 4163665 -  -8.1  -4.80167   CATGAAAAAGGAAAA           GACATTCTT TGAA AAGAATGCC            CATCACAATTAATGT  95 34
HCN55_RS21735 NONE
        gdpP NONE
        rplI 4160025 .. 4160048 - -15.4   -5.7946   CGTGGAATAAAAAAA          GAGGCTTGGA TGAA TCCAAGCCTC           TTTTCTATTAAGCTT 100 33
HCN55_RS21705 4156075 .. 4156092 -  -6.9  -2.99727   TTTAATGAATGAAAG             CCTTCGC TGCA GCGAGGG              TTTTTTAGCGGTTAT  62 45
        dnaB 4154308 .. 4154328 - -15.5  -5.63103   TTCGAATGAAAAAAA            CCCCAAGAG CAG CTCTTGGGG            CTTATGCGCCGGGCG 100 27
HCN55_RS21690 4153683 .. 4153693 -  -2.6  -3.38361   AAATCCGAACATTAA                 TTTA TTG TAAA                 TCTATATTCGTTCGC  46 122
        purA 4152255 .. 4152277 - -13.5  -5.63517   CTTTCAAACAAAAAA           CAAGCCCCT TAAAT AGGGGCTTG           CAGACATATTCTATT 100 40
HCN55_RS21680 NONE
HCN55_RS21675 4151839 .. 4151875 - -10.3  -3.27022   CGGACCTTACAGTAA   TTGCCCG-GAGAGCTG TCGTGT CAGCTCTCACAGACAA    ATAAGGAATTTAGCA  79 58
HCN55_RS21670 NONE
HCN55_RS21665 4151614 .. 4151635 -  -8.7  -5.79595   TCCTAAAAGAAAAAA           CGCACCTAC GATT GCAGATGCG            TTTGGTAAGTGGCTC 100 33
        walR NONE
        walK NONE
        walH NONE
        walI NONE
HCN55_RS21640 4145716 .. 4145726 -  -2.4  -3.16187   TAGAAAAATTATACA                 GCGC AAA GCGG                 AGTGGCCTTCTTCGG  43 8
        htrC 4144395 .. 4144418 - -13.2  -4.34402   TTTTGCATATCAAAA          CAGCCTGGCA ACGA TGCCAGACTG           CTTTTATTAACTGCC 100 32
HCN55_RS21630 4143879 .. 4143895 -  -6.6  -3.59966   ATATGTGATAGAGAA              CGTGTT AAGAA AACACG              GCCATAACATCTCGA  64 407
        rocD 4141142 .. 4141157 -  -3.9    -2.508   AAACGAAGTGAATAT              CCCGC CATGGT GCGGA               TTTATGCGTTTCGCA  45 27
HCN55_RS21605 NONE
        rocF 4138543 .. 4138560 - -14.1  -3.59262   GTCGACACGCTGAAA             CCCCCGC GGGT GCGGGGG              TTTTCTTATTACAGC 100 34
HCN55_RS21585 4136515 .. 4136529 -  -7.1  -4.96848   TCGTTTACAGAAAAA               GGCCT TTATC AGGCC               CTTTTCGTTAAAGCT  85 33
HCN55_RS21580 NONE
HCN55_RS21575 NONE
HCN55_RS21570 4134187 .. 4134205 -  -4.6   -5.7946   GGTTCAACAAAAAAA             GAGACT TCACACC AGTCTC             TTCATAAACAGAGAT  91 40
HCN55_RS21565 NONE
        fdhA 4132624 .. 4132647 - -13.2  -4.27441   ATTACCAGCAATAAA          GCCGG-CGTTC TGA GAACGTCCGGC          TTTTTCTTTTACTTC 100 34
HCN55_RS21550 NONE
        rlmH NONE
HCN55_RS21540 NONE
HCN55_RS21535 NONE
HCN55_RS21530 4127397 .. 4127417 - -10.5  -4.23434   TAAAACAGGTTAAAA            GGAAGTTCT ATA AGAACTCCC            TAGTTTAATATTATT  90 44
HCN55_RS21520 4124324 .. 4124340 - -10.9  -3.76534   CCAACAAATGGTAAA              GGAGAGT TAG ACTCTCC              TTTGTACCCCTCTAA  88 41
HCN55_RS21515 NONE
        liaK NONE
HCN55_RS21505 NONE
HCN55_RS21500 4121049 .. 4121069 - -12.7   -4.9725   AGGTGCACATAAAAA            GCTACTTCA TTG TGAAGTAGC            TCCCTTTATTAAAGG 100 34
HCN55_RS21480 4117924 .. 4117956 - -13.5  -4.48583   AACTAATATAAGAAA      TCCGCTATATTGCCA GAT TGGCAGGATAGCGGA      TTTTTCTTTTTCTAC 100 93
HCN55_RS21445 NONE
HCN55_RS21440 4107776 .. 4107798 - -11.3  -4.69214   TATTTAACAAAGAAA           GACTGCCCC GGGGG AGGGCAGTC           TTTTTCGTTTAAGAA  95 34
HCN55_RS21425 4106006 .. 4106031 -  -3.4  -5.22006   TGACCATAAGAAAAA        CCCATGCTGTTC CAGC GAAC--CATGGG         TTTTTCAGCTGTTAA  73 37
        yxaF 4104197 .. 4104215 -    -6  -3.97834   TAATTGTAGGAGAAA             GGATAACA AAA TGCTACCC             TTTTTTTCTCACCAG  65 20
        qdoI 4102997 .. 4103053 -    -3  -3.15147   TGTAATGAAGACATA GCCATCACGCTCCTTTTTTCTGTACC TTAAG GGTAGGAAAAAATGAAGCGCGGTAAC ATCGATTTAGGTGTC  45 75
HCN55_RS21405 4101767 .. 4101792 - -14.1  -5.57729   AAATAATAGAAAAAA         GTCTAGACGCC AATA GGCATCTAGAC          TTTTGTTTTCTTTGC 100 20
HCN55_RS21395 NONE
HCN55_RS21390 4099243 .. 4099271 - -14.8  -3.29471   TTTGTATCACAGTAA        GAAGACCTTCTT ATTAA AAGAAGGTCTTC        TGCTATTCTATTCAG 100 41
HCN55_RS21360 4092721 .. 4092761 -  -7.1  -5.08601   TTAGCTGAACAAAAA  TAAGAGAATTAACAACCTA TTT TATGTCATTAATCCCCTTA  TCTAGTATTTACTAG  90 37
HCN55_RS21355 4092190 .. 4092211 - -10.9  -4.30844   ATCGCATGATCAAAA           GGCGCTTCCT TAG AGGA-GCGCC           TTTTATTGTAACTCC  90 28
HCN55_RS21345 4089525 .. 4089542 - -11.3  -4.21086   GAAGAAACGAAATAA             GAGAGGG AGCC CCCTCTC              TTTTTGTCTTTTAAA  90 36
HCN55_RS21335 4088324 .. 4088344 -  -5.4    -5.252   CATTCTCATAAAAAA            GAGAGGCT TCATC ATCCTCTC            TTTTTTTCTGTGTCA  86 16
        htpG 4086251 .. 4086277 - -15.3  -5.69473   TACATTATAAAAAAA         GGAATCGTCTC CTTAT GAGACGATTCC         TTTTTCTGTTTACAC 100 35
HCN55_RS21300 4079737 .. 4079767 -  -7.6  -2.83271   CTATTGGCAGAATGA      GTCCGAACAGCGC ACATGG ACGCCGTTCGG-C       TGTTCGTCGTTTAGT  64 36
        iolB NONE
        iolC NONE
        iolD 4075947 .. 4075957 -  -6.8  -3.01712   GCCTCCCCTCTAATA                 CTGC TTC GCAG                 ATTCCAGCTTTTTCT  60 9
        iolE NONE
        iolF NONE
        iolG NONE
HCN55_RS21265 4071703 .. 4071744 - -16.8  -2.58999   GTTTTAGATATGAAG GGAGTTCGGCAGGA-A-GGC TGTC GCCATATCCCGCCGAACTCC ATGCTCAGCTTATGC 100 35
        iolI NONE
        iolJ 4069912 .. 4069926 -  -9.2    -5.626   CACCGCACAAAAAAA               CCGCCA TCT CGGCGG               TTTCTGGTCTCTTTA 100 38
        yxdJ NONE
        yxdK 4068100 .. 4068132 -  -5.7   -5.0916   CGTTCAACATAAAAA      TCCCCTTGACA TAAATCCATGT TATCAAGGGGA      AACAAAGCGGGCTAT  81 61
        yxdL NONE
        yxdM NONE
HCN55_RS21230 4065012 .. 4065035 -  -9.6  -6.28401   TAAAAAATAAAAAAA          CGGCACAGTCA TGA CG-CTGTGCCG          TTTTTTATGATTCAC 100 37
HCN55_RS21220 4063432 .. 4063456 - -10.1  -5.10968   AGTAACATATAAAAA          GCTCAACAC AATGCGA GTGTTGAGC          TTTTTTTCTTACTGT 100 34
HCN55_RS21205 NONE
HCN55_RS21200 NONE
        yidA 4060514 .. 4060534 - -14.1  -5.52347   AATAAAACGAAAAAA            TCCAGCCTT TAG AAGGCTGGA            TTTTTTATTATTTAG 100 33
        yxeI NONE
HCN55_RS21185 NONE
HCN55_RS21180 NONE
        snaB NONE
HCN55_RS21170 NONE
HCN55_RS21165 NONE
HCN55_RS21160 NONE
        sndB NONE
HCN55_RS21150 NONE
        eutH 4051194 .. 4051216 -  -4.8  -4.20516   TCCCGATTGAACAAA           GTTGAAACAG CTC CTGCCTCAGC           TATGGCTGGCTGAGA  65 21
HCN55_RS21140 4050285 .. 4050312 -  -8.4  -4.86939   TAAGAAACTGAAAAA        CGCTCTGGGC GCGGACCT GCCCAGAGCT         TACTTCTCCCAAGTC  95 25
        deoR NONE
        deoC 4048432 .. 4048452 - -11.9  -4.36914   TGTTTCCTCAGAAAA            CGGAAAGCA GTC TGCCTTCCG            TCAGCTCTTAATAGT 100 33
        nupC NONE
HCN55_RS21120 4045832 .. 4045858 -  -7.3  -5.32944   CCTATAATTAAAAAA         GCACACCCC GCTCAGCAT GGGATGTGC         TTTATTTTTTATTCT  95 34
HCN55_RS21085 4037866 .. 4037883 -  -5.5  -2.91582   CACTTCACTTACATA             GTCAGAC TGAT GTCTGTC              TGTTTTGCGCAGAAC  52 9
        abnB 4036296 .. 4036313 -  -7.7  -5.63504   AAGCTCATAAAAAAA             CACCTTC CCTC GAAGGCG              CTTCTCCATCTTATT 100 36
HCN55_RS21075 NONE
HCN55_RS21070 NONE
        yxiD NONE
        yxxD NONE
HCN55_RS21055 4032573 .. 4032623 -  -9.9  -5.94214   AAGAGAATAAAAAAA CCTAAATGACACAGATTGCGAGAG TCTC CTCCTGC-ACCTGCACCATTTAGG TTTTGCCTGCTTTCG 100 250
        bglP NONE
        bglH NONE
HCN55_RS21040 4028628 .. 4028641 -  -9.5  -6.23545   TCTAAATAAAAAAAA               GCGCC CAAG GGCGC                TTTTTTTACAAATCT 100 39
HCN55_RS21035 4027543 .. 4027555 -  -6.2  -6.09196   CCTAAAACAAAAAAA                GGCC GCATA GGCC                TTTTTACATTTTTTA 100 38
        wapA 4020359 .. 4020398 -  -2.8  -3.64703   TCCTCCTCATTTAAA  GTTTAAGTGAGGGTAG TTGTCATC CCCCCCTCGCTTAACC   TTATTAACGCCTTCT  50 29
        wapI 4019687 .. 4019711 -   -13  -5.00884   ATTTGTTCTAAAAAA          GCTTGTATCG CTTAT CGATACAAGC          TTTATCTTCAACTGC 100 226
HCN55_RS21020 NONE
HCN55_RS21015 NONE
HCN55_RS21010 4018202 .. 4018212 -  -2.6  -3.93819   ATGAAATGATAAGAA                 TAAA CCA TTTA                 TTAGCTATTAGTAAC  52 100
HCN55_RS21005 4017760 .. 4017772 -  -4.1  -3.74381   ATCTAACGTAAAACA                CCACA CAC TATGG                CCGTTGGGATTCTCA  54 88
HCN55_RS21000 NONE
HCN55_RS20995 NONE
HCN55_RS20990 NONE
HCN55_RS20985 NONE
HCN55_RS20980 4015644 .. 4015669 -    -7  -4.24123   TCAAGAAGGGGAAAA         TCA-GTGTGAC TTCTT GTCACACTTGA         TCACATCCCAACCTC  75 219
HCN55_RS20975 4014372 .. 4014388 -  -7.9  -4.29396   AATGATGTATTAAAA              GCCAGCG ATT CCCTGGC              GTTTTAGCTCCTGAA  78 3
        dbpA 4012811 .. 4012840 - -11.5   -4.3129   CAGCCAGCAGCAAAA       TGACCTGCCCC TTTAACTG GGAGCAGGTCA        TTCATCATTTATTCG  91 30
HCN55_RS20960 NONE
        licT 4009579 .. 4009631 -  -5.8  -5.86609   TGAAAAAAATAAAAA CCTAAATTACCATCAGCACAGA-CA GAGA TGATCCGCACTCATTGCAATTTAGG TTTTGCCTGCTTTAT  93 118
        bglS 4008661 .. 4008685 - -12.2  -3.57783   TCATTACAATCATAA          GAGCCTGCTA TATTG CAGCAGGCTC          TTTCACATTTGGCAT  90 40
HCN55_RS20940 4004973 .. 4004991 -  -6.8  -4.25104   TGCTCCTTATGAAAA             GTATCTTC CTT AAAGATAC             AGGAGCCGATCAAAT  73 35
HCN55_RS20935 4004639 .. 4004655 -  -7.3   -5.7946   TTTCCAATAAAAAAA              GAGACAC AGG ATGTCTC              TTTTTTTACTGTTTG 100 31
HCN55_RS20920 4001111 .. 4001137 - -12.4  -5.14965   ATTCCGATTAAAAAA         GGAAAGCTCC TTTTTTC GGAGCTTTCC         TCTACCATTCATTTC 100 34
HCN55_RS20915 NONE
HCN55_RS20910 NONE
HCN55_RS20905 NONE
HCN55_RS20900 3997358 .. 3997387 -  -5.8  -6.01187   AAGCAAAGAAAAAAA       CACACTTGATTCC CTAGC GGAG-CAAGTGTG       TTTTTTATGTCATTG 100 35
HCN55_RS20850 NONE
        galE 3986777 .. 3986798 - -14.5  -5.00616   TTGTTCTTTAAAAAA           GGCCTTCTC AATT GAGAAGGCC            TCCATTCTTATTCCG 100 33
HCN55_RS20835 3984753 .. 3984777 - -10.1  -5.37593   TTCTAAATGAAAAAA          TCCCTCTGT TTCAAGT ACAGAGGGA          TTTTTCTTTATTTAG 100 33
HCN55_RS20825 NONE
        msmX 3980958 .. 3980979 - -14.5  -5.27779   TTCAATAGCAAAAAA           CCGGACATG TCTC CATGTCCGG            TTTTTTTGATCTTAT 100 37
HCN55_RS20815 3979910 .. 3979925 -    -6  -5.26119   CCTCGAAAAACAAAA              GCCGCC AGCA GGCGGA               CAGCGGGTATTTCGG  87 145
        cydA NONE
        cydB NONE
        cydD NONE
        cydC 3970200 .. 3970219 -  -9.3  -5.63517   TTTTCAAACAAAAAA            GACAGCC TTTTAG GGCTGTC             TTTTATTTTACAGGA 100 28
HCN55_RS20775 3969276 .. 3969298 - -12.1  -4.71426   GGGGTATCAAGAAAA           GCTGTCTTC TCTCT GAAGACAGC           TTTTTTATCATTCAA 100 33
        sigY NONE
HCN55_RS20760 NONE
        yxlD NONE
HCN55_RS20750 NONE
HCN55_RS20745 NONE
HCN55_RS20740 3964703 .. 3964724 -  -2.3  -3.33744   TCTTGCCGGAAAAAT           CGCACAGC TTATCGG GCT-TGCG           GGAGTTTTTTATGGA  45 103
HCN55_RS20725 NONE
HCN55_RS20720 3960940 .. 3960959 - -10.7  -5.64274   TGACCTATAAAAAAA            CAGCCGG GATCAG CCGGCTG             TTCTAGATGCGGACA 100 15
        licR 3958792 .. 3958811 -  -6.6  -2.82516   GTTGCTATCATCATA            TTATGAAA TCGC TTTCATAA             ACACTCAGGGTTTTT  58 75
HCN55_RS20710 NONE
        celB NONE
HCN55_RS20700 NONE
HCN55_RS20695 3955348 .. 3955368 - -12.5   -5.5604   GCAAGTAAGAAAAAA            GCCGGCCCA TTA CAGGCCGGC            TTTTTTTACGCTTCA 100 31
HCN55_RS20655 NONE
HCN55_RS20650 3947556 .. 3947576 -  -6.7  -5.80364   ATTGTAACAAAAAAA            GACCGCATG AAA CGAGCGGTC            TTTTTTATTATCGGA  93 33
        ywaC 3946786 .. 3946805 - -13.6  -5.99154   TATCAAATAAAAAAA            GACGGCAC TTGG GTGCCGTC             TTTTTTAATCCACTT 100 30
HCN55_RS20625 3942377 .. 3942397 -  -5.5    -3.494   GAATGTGTGATACAA            CAAAAAAGG TGT CATTTTTTG            AAGATGCGATAAAGC  58 16
HCN55_RS20620 3941381 .. 3941403 - -10.7  -5.76237   GAGACAAACAAAAAA           CGCTTTTGA TCATC TCAAAAGCG           TTTTTTTATCTGATT 100 40
        celB 3935133 .. 3935162 -   -13  -3.34398   CTTTCGTTTGAAAGA       GATGATCAGCCC TATGAC AGGCTGATCATC        TATCACATCACATTT  93 28
HCN55_RS20595 3934381 .. 3934406 - -10.6  -4.86385   AGCGGTAAAAATAAA         GAACGTACAT TTTGTG ATGTACGTTC          TTTTTTATCTATACC 100 30
HCN55_RS20585 3932654 .. 3932674 - -10.4  -6.02914   TCTACATAAAAAAAA            GCTGCCCC TGAAC AGGGCAGC            TTTTTCATTATTTTT 100 33
HCN55_RS20560 NONE
        thiM NONE
        thiE 3927524 .. 3927544 -  -7.6  -5.22312   ATGGACAGCAAAAAA            GCTGTCCT TTTAC AGAACAGC            CCTTTGAAGGAAAAT  93 47
        efeU NONE
        efeM NONE
        efeB 3923521 .. 3923538 -  -9.9  -3.59262   GTCGACACGCTGAAA             GAAGCCT GTAA AGGCTTC              TTTTATGATTCCAGC  80 28
HCN55_RS20530 3922631 .. 3922648 -    -7  -5.85737   ACAGGAATAAAAAAA             GCTCTC TTTATC GAGAGC              TTTTTCCTTACTTTT 100 33
        slrC NONE
HCN55_RS20505 3918727 .. 3918742 -  -2.6  -2.58418   TCTTCATAGAAAACG              GCAG-AT CAT ATGCTGC              AGTCCTCTCATACCC  41 33
HCN55_RS20500 NONE
        galT 3915943 .. 3915965 - -13.5  -4.93595   ATAAAAATCGAAAAA           GCCTCAACC CTAGC GGTTGAGGC           TTTTGACTGGTTTGG 100 12
        qoxA NONE
        qoxB NONE
        qoxC NONE
        qoxD 3911145 .. 3911164 - -12.2  -5.27399   GAAGACAGCAAAAAA            CCCTCTTC CACT GAAGAGGG             TTTTTTGTATTATTC 100 35
        rodA 3909163 .. 3909184 - -10.9  -5.60993   CTCTGCACAAAAAAA           GACAGCCTC TGTA AAGGCTGTC            TGCATATCAAGAATT 100 32
        nfsA 3908312 .. 3908329 -  -9.1  -5.19879   CGTGAAACATAAAAA             CCCCTCC AGAC GGAGAGG              TTTGCTTTAGTTTTT 100 32
HCN55_RS20450 3907130 .. 3907150 - -18.3  -5.29445   GTTGAATAAGAAAAA            GCCCTGCCG ATT CGGCAGGGC            TTTTTAAAGATCAGT 100 36
HCN55_RS20440 NONE
        sacT 3902968 .. 3902991 -    -6  -5.84381   TGATCAATAAAAAAA          CTTCCAGAGA TCAC TCCCTGCAAG           TCAAAGCGGTTATTC  93 35
        scrA NONE
HCN55_RS20420 3899057 .. 3899071 -  -2.9  -4.84311   TTTCACATAAGAAAA               TAGAA GGATT TTCTA               CATAAGTGTCCAAAT  65 23
HCN55_RS20415 3898703 .. 3898721 - -13.2  -5.36441   TTTTCACAGAAAAAA             CTGCCGAT CCC ATCGGCAG             CCTGTTTATTTGATT 100 31
HCN55_RS20405 NONE
HCN55_RS20400 3896712 .. 3896724 -  -3.4  -5.14477   TATATACCTAAAAAA                TCAG ACAAG CTGA                CGCCTGCCAATATAA  73 13
HCN55_RS20395 3896104 .. 3896118 -  -4.2  -2.63596   TTGGACGGGAGATCA               GTGGGA ATA TCCTAC               TGAAACGGCATACTA  47 38
HCN55_RS20390 NONE
HCN55_RS20385 3894524 .. 3894540 - -10.1  -5.65927   TACTCAAATAAAAAA              GCGCAGA TCA CCTGCGC              TTTTTACAAATCCTT 100 29
HCN55_RS20375 NONE
HCN55_RS20370 NONE
HCN55_RS20365 3890853 .. 3890880 - -12.2  -5.64304   CAAGATAAGAAAAAA        GCCAATCACTCAT ATG ATGAG-GATTGGC        TTTTTTGTTTATAGA 100 34
        spsA NONE
HCN55_RS20350 NONE
HCN55_RS20345 NONE
HCN55_RS20340 NONE
HCN55_RS20335 NONE
HCN55_RS20330 NONE
HCN55_RS20325 NONE
HCN55_RS20320 NONE
        rfbB NONE
        rfbD NONE
HCN55_RS20305 3879796 .. 3879820 -  -3.6  -5.51165   AAAAGGGCAAAAAAA         GTCGAAGATGC CTCT GC-TCTTCGAT          TGATCACGTTCCTAT  81 43
        bslB 3879009 .. 3879031 - -11.4  -5.66684   GAATCCACAAAAAAA           GAGACTGAAA ACA TCTCAGTCTC           TGACTACAAATCTAT 100 44
        rocG 3877569 .. 3877585 -  -3.7   -5.0666   TACGCAAAAAACAAA              TGCAAAA TTA TTTTGCG              GAGGCTTCTCAAATT  72 39
        pruA 3875781 .. 3875808 - -12.1  -3.81062   ATCAAAAAGTTGAAA        TCGTGCGATCC GCTAAA GAATCGCACGA         TTTTATTTCTCTCAA  93 42
HCN55_RS20285 NONE
HCN55_RS20280 3872612 .. 3872633 - -15.9  -5.52909   TAACACGTAAAAAAA           GCTCTCCGG CCTC CCGGAGAGC            TTTTTCTATTGCGCC 100 31
HCN55_RS20275 3871147 .. 3871160 -  -6.7  -6.04953   ATACAAACAAAAAAA               CCCTT TAAA AAGGG                TTTTTAATTATAGGA 100 56
        bacA NONE
        bacB NONE
        bacC NONE
        bacD NONE
        bacE NONE
        bacF 3865135 .. 3865156 - -14.5  -5.07941   AAAAGCATATAAAAA           CATCCCGCT TTTT AGCGGGATG            TTTCTTGTAATGACC 100 15
         pta 3862174 .. 3862197 - -14.6  -5.11033   CAGAAGCGCAAAAAA          GGCAGCCCTC GGTC GAGAGCTGCC           ATTGTCTTCAATTTT 100 42
        cysL NONE
        ywfL 3860237 .. 3860265 - -11.7  -5.36441   GCTTGAGATAAAAAA        TGCATGCCGGC ATATACA GCCGGCATGCG        AAGAACGTTCACCCA 100 34
HCN55_RS20215 3859083 .. 3859108 - -10.5  -5.06505   AATGACATAGAAAAA         TCCCAAAACGG GCAG CTGTTTTGGGA          TTTTCGCCATGTGCA 100 133
HCN55_RS20205 3857819 .. 3857839 -  -5.4  -5.26875   TTGTGAAGCAAAAAA           GCCT-GACC TGAG GGCCGAGGC            TAAGAAAAAATATGT  86 43
HCN55_RS20200 NONE
HCN55_RS20195 3855822 .. 3855848 - -13.2   -5.7946   TTGTCAATAAAAAAA         GCAAAAGAAACG GAT CATTTCTTTTGC         TTGGTATGGTTAACA 100 35
HCN55_RS20190 NONE
HCN55_RS20185 3853578 .. 3853608 - -11.2  -5.96894   ATTCAAATAAAAAAA       CACACCCATCCCTC TAA AAGGGACGAATGTG       TTGATCATCCGTGGT 100 293
        thrS 3851094 .. 3851105 -  -4.4  -4.86862   GTCAAAAAAGCAAAA                TGTG AATT CACA                 GCTTTTATCCTACAT  71 35
HCN55_RS20175 3850544 .. 3850564 - -11.8  -3.90729   AATAATCTCTATAAA            GCCGGCGC TTCGC GCACCGGC            TTTTATTATCCCTAT  91 37
HCN55_RS20165 NONE
HCN55_RS20160 3848923 .. 3848961 - -10.4  -4.57837   ATATCCCCCTAAAAA   TGAAAAACCCCGAGTC TTGTTTC GGCTCGGGATTTTCCA   TGTCCTATTTCTGTA  95 109
        speE 3845614 .. 3845634 -    -9  -5.00616   CTTTCCTGTAAAAAA            GCGCAAGA TTCGC TCCTGCGC            CATACCTTCATTATT 100 36
        speB 3844686 .. 3844706 - -14.1   -5.7946   CTGGGAATAAAAAAA            CATCCAGAC ATC GTCTGGATG            TTTACTTATTTCACA 100 31
HCN55_RS20125 NONE
HCN55_RS20120 3841258 .. 3841270 -  -4.1  -3.85817   ACGTCCTTTTAGAAA                TGCAC AAC ATGCA                GCGGTTAAATCGTAA  56 30
HCN55_RS20115 3839370 .. 3839418 -  -6.8  -3.91164   AATCCGTGAAAAACA TGACAGCAGCTTTTCAGAAACT CACAC AGTCTCATCAAAGCTGCTGTGA CTTTCAGCAACACAA  68 467
HCN55_RS20065 NONE
HCN55_RS20060 3830473 .. 3830496 - -11.8  -5.60993   TTTCTCATAAAAAAA          GGACAAAGCC CGAA GACTTTGTCC           TTTTGATCGTGATTA 100 38
        narK NONE
         fnr 3828345 .. 3828364 - -10.8  -5.55698   CACAAGGTAAAAAAA            CAAGGACA CCGC TGTCCTTG             TTTTTTTCAGTCAAT 100 32
HCN55_RS20040 3826990 .. 3827010 -    -9   -5.9663   AAAGATCAAAAAAAA            CCGGCTCT ATTTA AGAACCGG            GCTCAGCGTTTTCAT 100 15
HCN55_RS20035 NONE
        narH NONE
        narJ NONE
        narI 3820395 .. 3820412 -  -9.1  -5.24129   CCTTGGCAGAAAAAA             CCCCCTC TTGC AAGGGGG              ATTTTCACGAGCGTT 100 30
         cls 3818437 .. 3818452 -  -6.8  -3.48276   TTTTTTCTTACAGAA              CACCTG AAAA CAGGCG               GGCAAACGACTCTTT  64 2
HCN55_RS20005 NONE
HCN55_RS20000 3816042 .. 3816083 - -15.5  -2.52795   AAGCGCTCTAACTTA CATACAAAAAAGGATAGAC ATCT GTCTATCCTTTTTCTTATG  CTCTTACATAATGGA 100 21
HCN55_RS19980 NONE
        acdA 3809978 .. 3809990 -  -3.4   -3.0516   TATCAATAATGAAAG                CGAT TTTGT ATCG                TTCTTATACAAACCA  45 140
HCN55_RS19970 3809273 .. 3809300 - -17.2  -4.67697   GGTGAAAATAAGAAA        GCTCCCTTTCAA TTTC TTGAAAGGGAGC         ATAACGTACTATGTT 100 126
        pyrG 3807515 .. 3807544 -    -8  -5.85425   GAAACAAATAAAAAA       GACTTGCCCGCTT TTGAC AAACGG-CAAGTC       TTTTTTATTACTTCT 100 33
       spo0F NONE
HCN55_RS19950 3805327 .. 3805349 - -13.4  -4.27861   AAGATAGACGGAAAA           CCGCCTGTCA AGC TGTCAGGCGG           CTATAAAAAGTTCCA 100 47
         fsa 3804571 .. 3804607 -  -8.8  -4.32857   TCGGTGAAATACAAA   GGCCGCGGCAAACAG GCATAAAG CTGTTTGCCGCC-CC    TTTCATTATTTGTTC  83 31
HCN55_RS19940 NONE
        glpX 3801921 .. 3801936 -  -8.2  -3.92659   TCTGCAAAAGTTAAA              GCGGGC TCAC ACCCGC               TTTTTCTGTTTGTTA  77 38
HCN55_RS19930 3801534 .. 3801548 -  -3.6  -2.52681   AGAGGAAATAGATAC               GTCTTT CAT AAAAAC               ACCACGCTTTTCATA  45 50
         rho NONE
        rpmE 3799902 .. 3799924 -  -9.2  -5.53436   AGACAATATAAAAAA           CAGGCAAG ACTGCTG CTTGCCTG           TTGAGAAATCTATTA 100 41
HCN55_RS19915 3799215 .. 3799235 -  -5.4  -6.12328   AGAATATAAAAAAAA            CACCGG TGTTTTTAG CCGGTG            CATTCTATCTTTATA  95 54
        malS 3797245 .. 3797259 -  -4.2  -3.50133   TAGCTTTACAAAAAG               CTTTCC CTC GGACAG               AAAAATTTACTCGCT  55 43
HCN55_RS19905 3796211 .. 3796227 - -12.3  -5.01042   AACCTAAAGCAAAAA              GCTCCCT TAA AGGGAGC              TTTTTTTGTTACGCA 100 34
        prfA NONE
        prmC NONE
HCN55_RS19880 3792703 .. 3792721 - -13.2  -5.44119   TTTACTGCAAAAAAA             GGAAGCCT AAG AGGCTTCC             TTTTTTATTAAAACA 100 33
      spoIIR 3791515 .. 3791526 -    -3  -3.69094   AATCTATGAGGCAAA                TCTA TTTT TAGA                 CCAGATGATTAGGAA  50 34
HCN55_RS19865 3790958 .. 3790990 - -12.1  -4.63218   TGTCCTGTAATAAAA      CAAGCGTTATCCACA AAT TGTGGACAACGCTAA      TAAAGAAGTGGATAA 100 60
HCN55_RS19860 3789757 .. 3789811 -  -6.6  -4.17296   TCCGACATACATAAA TAACCCCCTT-GGACACGC-CCCGCT TTTTT AGCCTATGCGTGTCCAAAAAGGGTTA GAACATCTGACTGCT  70 42
HCN55_RS19855 3789160 .. 3789178 -  -4.6   -5.5353   TATATGAAGAAAAAA             GAAACG GCGACTT CGTTTC             TTTTATTGGTATATT  84 39
HCN55_RS19850 3788640 .. 3788651 -  -2.2  -2.91873   AGGATTTGCAAATGA                CCTG TTTG CAGA                 TTTTCTGACAACTTA  41 38
        rpiB NONE
HCN55_RS19840 3787479 .. 3787504 -  -8.4  -5.09259   TATCTTAAAATAAAA         GAAAAGACTG GCTATG CAGTCCTTTC          ATTCGCACTCATAAA 100 24
        glyA 3786014 .. 3786038 - -11.4  -5.04987   AACATCGTCAAAAAA         CCCGCC-GGGC ATAA GCCCAAGCGGG          TTTTAGGATCTTAAT 100 36
         upp 3785257 .. 3785280 - -11.8  -5.63504   AACTGGATAAAAAAA          TGAAACCCCC TTTT GGGGATTTCA           TTTTTTATTTTGTTC 100 30
HCN55_RS19825 NONE
        atpB NONE
        atpE 3783420 .. 3783451 -    -3  -3.67481   TCAGACATAAAGCAA      TGGCGAAGGTTCTCT TGG AATGATC-TTCGCCA      TTTTTAGTTCATATA  50 53
        atpF NONE
HCN55_RS19805 NONE
        atpA 3780697 .. 3780723 - -13.2  -4.57569   TCATCTGCGTAAAAA         GAGAGAAAAAGA GAA CCTTTTTCTCTC         ATCAGCATTCGAGTT 100 39
HCN55_RS19795 3779807 .. 3779819 -  -6.2  -3.59979   TCTTTCTATTCTAAA                GCGG CTGCT CCGC                CGACAATTTCCGTAA  61 3
        atpD NONE
HCN55_RS19785 3777900 .. 3777920 -  -9.8  -5.60993   GCGTTCATAAAAAAA            TCCTTCTC ATAAA GAGAAGGA            TTTTTTCTTATTTCC 100 33
HCN55_RS19775 3777017 .. 3777034 -  -2.1  -4.16921   TAATAATGTTCAAAA             CCTAT-TA AAA TAGATAGG             GAAGCTGCTGTGAAT  53 12
HCN55_RS19770 NONE
        murA 3774770 .. 3774794 - -10.1  -6.07374   ACAAAAAATAAAAAA          CCAGTATGCCA GAG TGACATACTGA          TTTTCAAGTAAGTTT 100 39
      spoIID 3773551 .. 3773583 - -16.5   -3.2247   AAAGATATTCAGGAA      CAGAAAAAGACGCCC AAT GAGCGTCTTTTTCTA      CTTTTTCGCCATATA 100 23
HCN55_RS19755 3772483 .. 3772504 -  -8.7  -5.03994   TGTTACATACAAAAA           GAGGCTGAC CATC ACCAGCCTC            TTTTTTCTTATTTAG 100 33
HCN55_RS19750 NONE
HCN55_RS19745 3771481 .. 3771498 -  -6.2  -5.59655   TAAACCAATAAAAAA             GGCGCC TGGGGG AGCGCC              TGATCTTTAGGTTCC  91 41
HCN55_RS19740 3771094 .. 3771115 -  -5.1  -5.03994   TCTGAGACACAAAAA           GAGCCCTCT ATAT AAAGGGCTT            TTACAGGATGTGATG  76 169
        fdhD NONE
        moaA 3769147 .. 3769170 -  -8.9  -5.46657   GATTCTAATAAAAAA          GCTTACCGG ACAGTG CCGATAAGC           TTTTGACTTCAAATT 100 39
        rapB 3767834 .. 3767851 -  -9.9  -6.48081   TGCATAAAAAAAAAA             CCATCTG CCAG CAGATGG              TTTTGTCTCATACTT 100 33
HCN55_RS19720 NONE
        csbD 3766925 .. 3766949 -  -7.9  -6.17292   AAAGCGAAAAAAAAA          GACAAGAAACA TTT CGTTTCCTGCC          TCTTCCGTACGATTA 100 38
HCN55_RS19710 3766427 .. 3766440 -  -3.1  -3.42583   CTAATACAGCGACAA               TCTGCC CCG GGC-GA               AGCTAAGGCTGTGCA  48 68
HCN55_RS19705 3766042 .. 3766065 -    -6  -2.62616   TCAGGCGGGACATCA          CCTCCCTTTCT TCG AGAATGGG-GG          TCATACGGTAAGATG  54 106
        ureA NONE
        ureB NONE
        ureC 3763543 .. 3763563 -   -14  -3.68988   TTTTAGTCAATAGAA            CGGCCGGA TGCAC TCCGGCCG            CGTCTTATCAAAATA 100 33
HCN55_RS19685 3763022 .. 3763047 -  -9.9  -2.57931   GTTAGCGGTGAGAAG         TCATCCCTTTT GATT AAAAGAGATGA          TTCATAACATCTTTT  74 13
HCN55_RS19680 3762295 .. 3762324 - -13.7  -2.79276   AGCACTTATTAATGA       GAAAAACCCGGAG CTGG CTCCGGGTTTTTT        ATTATTCCGCTTCGC 100 27
         mta 3760980 .. 3761002 - -17.7  -3.61774   TATAAGATGCGTAAA           CCCCCGGCC TTTAC GGCCGGGGG           TTTTCCTGATGGTCA 100 13
HCN55_RS19660 3758795 .. 3758835 -  -9.7  -5.47218   CTGCATGCAAAAAAA  CACACCCGGATCGTCTGGA AAA TCTCAACAATCCGGGTGCA  GATCTTCTTTAATAC 100 34
      spoIIQ 3756529 .. 3756549 -  -5.4  -5.82172   AGTAACAGAAAAAAA            CGCCCATC ACAAG GATAGACG            TTTTCTTCATTAAGA  91 35
HCN55_RS19635 3755997 .. 3756024 -  -9.2  -4.89838   CTAAGAAAGACAAAA        GCCGGC-GTCT GAAATCA AGACAGCCGGC        TTTAATATTTCTCAT 100 27
HCN55_RS19615 NONE
HCN55_RS19610 NONE
HCN55_RS19605 3750762 .. 3750785 -  -7.4  -5.38549   CTTAAACAAGAAAAA          GAGACAGACC TCAG AGCCCGTCTC           TTTCTTAAGATGCAG  95 30
        pucI 3749071 .. 3749081 -    -4  -3.07755   ATAGATTTCTAAAAC                 CATT ATA AATG                 TTCTATTTATGGAAA  47 81
HCN55_RS19595 3747583 .. 3747614 - -15.9  -3.73042   TTTTCCATTAAAACA      CGGCGCCCTCTCG GTTGAA CGAGAGAACGCCG       CTTATAGCAATTATT 100 36
HCN55_RS19580 NONE
     spoIIID 3745136 .. 3745146 -  -5.4  -3.04517   ATCCTCCTTGAAAAT                 CTGT TTC ACAG                 TAAATATCCACATTG  53 157
         mbl 3744079 .. 3744101 - -10.7  -5.60993   TTTTTCATAAAAAAA           CCTCATTCT TTTTC AGAATGAGG           TTTGTGAAATCAGCT 100 35
        flhO NONE
        flhP 3741925 .. 3741936 -    -3  -4.07437   AAAAGTATTAAAGAA                TCAA GAAT TTGA                 AATGAATTCACCAGT  56 382
        fabZ 3740554 .. 3740579 -  -6.9  -5.95539   TTGTAAAGAAAAAAA         GACAAATGTGCC GCT GGC-CATCTGCC         TTTTTTCAATTATTC 100 35
        mscL 3740099 .. 3740119 - -11.9  -5.72616   ATTGAGATAAAAAAA            GACGCCGTT TCT AACGGCATC            TTTTTTATTCCGGCG 100 30
HCN55_RS19535 3738538 .. 3738558 - -15.5  -5.14563   TTCTGCATGAAAAAA            GCTGCCGTT TTG AACGGCAGC            TTTTCTCTTCGTGCT 100 435
HCN55_RS19520 3737475 .. 3737487 -  -3.3  -4.67168   AAAAACGCTTAAAAA                TGGCT TTC AGCCT                CTGTTTTTATCTTTC  64 19
         ssb 3736976 .. 3736992 -    -8  -4.52502   GGCAAAAAGAAAGAA              CCAGTC TGGTC GACTGG              TCAATTTTGAGGGGA  82 96
        glcR NONE
HCN55_RS19505 3735089 .. 3735109 - -15.5  -5.19212   ATCATGACTAAAAAA            GCTGGCTCT AAA AGAGCCAGC            TTTTTTCCGTTCATA 100 116
HCN55_RS19490 3730338 .. 3730358 -  -5.4  -5.60993   TCTCGCATAAAAAAA            TCCCGC TAAAGGCGT GCGGGA            TTTTTATGTTGCATA  88 29
        tkmA NONE
        ptkA 3728653 .. 3728681 - -11.9  -4.56597   CTTTTTTCGCAAAAA        TAAATAACGGGCA CGA TGCACGTTATTTA        TTTTTGCATGAAATT 100 23
HCN55_RS19475 3727690 .. 3727704 -  -5.6  -2.85503   CTCCAACAGTTAAAT               TGCTGC TTT GCAGCT               TCCGTAATATCGTAT  52 183
        uglF 3726314 .. 3726332 -  -6.7  -5.62219   AATAGATGAAAAAAA             GACTGGT GCGCA ACCAGCC             TTTCTTTTTCATCTA  93 38
HCN55_RS19465 NONE
HCN55_RS19460 3725071 .. 3725083 -  -2.6  -3.68378   TTATATTTTAAAATA                GCCA GAAGG CGGC                TTAAATAGGGTAAAT  50 135
HCN55_RS19455 NONE
HCN55_RS19450 NONE
HCN55_RS19445 NONE
HCN55_RS19440 NONE
HCN55_RS19435 3721251 .. 3721276 -  -5.5  -6.06529   CACATACAAAAAAAA         CACTTGATGACT TAG AGCC-CCAAGTG         TTACACGTGATTTTT  95 26
HCN55_RS19425 NONE
HCN55_RS19420 3719405 .. 3719420 -    -9  -5.38047   TATTTATAGAAAAAA              GCACCT GGAC AGGTGC               TTTTTTATTTTAGCC 100 30
         ggt 3715567 .. 3715594 - -14.2   -5.9663   AAATATCAAAAAAAA        GAACACCCAGAG CAAG CTCGGGGTGTTC         TTTTATGAAACGTTT 100 422
        cotH NONE
        cotB 3711561 .. 3711583 -  -3.4  -4.74103   CCTTTAACTGAAAAA           GGGCATCA CTTTATC TGATGCTC           CTCCATTATCTATTA  67 38
HCN55_RS19370 3710822 .. 3710847 -  -4.7  -5.01811   GTATGAAACGAAAAA         CTGCCTTCT GCTTTTCA AGAGGGCAG          TTTTGTATACACTAG  76 37
        alsS NONE
        budA 3705621 .. 3705645 -  -7.2  -5.31519   AGAGCCAAATAAAAA          GAAAGCCC TGCTAAAAG GGGCTTTC          TTTTTTTCTTTTATT  95 36
HCN55_RS19345 3704995 .. 3705026 - -12.4  -4.42806   GGATTTTTAAACAAA      TACAGCCCTGCC GTATGTTG GACAGGGCTGTA       TTTTAAACAAAAGGC 100 28
        pgsB NONE
        pgsC NONE
        pgsA NONE
        edmS 3694462 .. 3694485 -   -14  -5.27335   CTGGGCAAATAAAAA          GAGAGTGTCT CATC AGACACTCTC           TTTTTTTGAATTATT 100 36
        pgdS 3693086 .. 3693104 -  -8.9   -5.0065   TATGCATAAAGAAAA             GACTCCA GAGAT TGGAGTC             TTTTTCTTTTATTGC 100 34
HCN55_RS19265 3689363 .. 3689384 - -13.7  -4.50193   AGTAAGCAATCAAAA           GGGTGCGCA TGAT CGCGCACCC            TTTTTTATGTTCCGA 100 30
        manA 3684429 .. 3684451 -  -7.1   -5.7946   TTTCTAATAAAAAAA           CTTAACCTC GAAGT GAGATTAAG           TTTAAATATGAGACA 100 27
        lytD 3681626 .. 3681666 - -21.5  -3.30243   ATTGAGGTGTGATAA  TCAAATAGGCTGTAGCTAT TTA ATAGCTACAGCCTATTTGC  AACTTTCTAAGTTTT 100 41
        tagD 3677372 .. 3677397 - -12.1  -4.81083   TGTAAGCATCAAAAA         GTACTTCTTAT TTCA ATAAGAAGTAC          TTTAATTAGATATTG 100 65
        tagE NONE
        tagF 3672970 .. 3672989 -   -10  -4.71382   ACAAGTATCTAAAAA            GCTGCCGA AAAA TCGACAGC             TATACATTTTATAAA  91 51
        tagG NONE
        tagH 3670389 .. 3670414 - -12.7  -5.34381   AAATCTAAACAAAAA         GGCTATTGGAC ATTC ATCCAATAGCC          TTTTTTTATTTCAAC 100 31
HCN55_RS19185 NONE
HCN55_RS19180 NONE
HCN55_RS19175 3666661 .. 3666672 -  -4.4  -4.14472   TGAATATTCTCAAAA                CCAA TAGT TTGG                 TTAATGATACTTTCT  61 244
        wecB 3661064 .. 3661090 -   -16  -5.56372   AAAGTAAAACAAAAA         GAAGCTTCGCAC AAT GTGCAAAGCTTC         TTTTTTATTTGCCTG 100 30
        lytA NONE
HCN55_RS19140 NONE
        lytC 3655939 .. 3655966 - -11.5  -5.37043   ATTTCATATAAAAAA        GAGACAAATCT GTGATT AGATTTGTCTC         TTTCGATTATCTGTA 100 32
HCN55_RS19125 NONE
HCN55_RS19120 NONE
        tuaD NONE
HCN55_RS19110 NONE
HCN55_RS19105 NONE
HCN55_RS19100 NONE
HCN55_RS19095 3646709 .. 3646734 -  -2.6  -3.78682   GTATAATCAAAAAAC         GCGCA-TCCCA ATTTA TAGGACTACGC         ATGTTTTTGAATCCC  50 20
HCN55_RS19090 3645485 .. 3645504 - -10.7  -5.60993   TTGCGCAGAAAAAAA            CTCCGGC ACATAA GCCGGAG             TTTTTAATTCCTTTT 100 29
        degS NONE
        degU 3641427 .. 3641450 -  -8.9  -5.44119   GGCAGCCTAAAAAAA          GACCTGCCT AGTAAA AGGCAAGTC           TCCTATTATACTATC 100 36
HCN55_RS19065 3640490 .. 3640510 -  -8.3  -5.86465   AAGAATATAAAAAAA            TCTCCGCTC TAA AAACGGAGA            TTTGGCCTTATTTAA 100 33
       comFA NONE
       comFB NONE
       comFC 3637970 .. 3637988 -  -3.1  -4.84761   ATATCGGCATAAAAA             CAGAATC ATTTA GCTTCTG             ATCAAGGTAAAAGAT  67 16
HCN55_RS19045 NONE
        flgM NONE
HCN55_RS19035 NONE
        flgK 3634729 .. 3634745 -  -2.2  -4.28254   TCGCAATATTTAAAA              GCTGTT CCTTT AACTGC              TTTACCTCTACGCCA  56 379
HCN55_RS19020 NONE
        fliW NONE
        csrA 3632898 .. 3632918 -  -6.9  -6.23317   ACAAAAATAAAAAAA            TCCTCAC TTTTTTT GTGAGGA            TAATGCGGAGATCAC 100 8
         hag 3631811 .. 3631831 - -13.3  -4.59424   AAATTTAAATTAAAA            GACCCTGGC AAC GCCAAGGTC            TTTTTTAAAATTAAC 100 36
        flaG NONE
HCN55_RS18995 3629761 .. 3629773 -    -2  -2.73124   TGTCATCCTCCAAAT                TACA TTTAT TGTA                CAAGAAGCTGTGATA  40 18
        fliS 3629342 .. 3629361 -    -2  -2.64735   AGTTGATCTATATTA            TTCATGCG ATCC CGCCTGAT             CCGTGCCGGTCCTTC  40 7
        fliT NONE
HCN55_RS18980 3628506 .. 3628516 -  -2.6  -2.51057   GCTGAAACATAAATC                 TTTT GTG AAAA                 TTCAGTGAACTTTGT  41 127
         hpf 3627825 .. 3627847 - -11.3  -5.74684   TAAGAAAAACAAAAA           CCTTCCGCG GACAT CACGGAAGG           CTTCTCTTCATTATT 100 36
        secA 3625118 .. 3625142 -   -15  -2.83772   ACCTCATTAAAAGAT         CCGCAGGCGCC TGCA GGCGCC-GCGG          TCAGTAAACTTGCCG 100 48
        prfB 3623962 .. 3623984 -    -7  -6.08342   TAAGAAATAAAAAAA           CACACCCG TATGCAT CAGGTGTG           TTTTTCAGCTTATGA 100 35
HCN55_RS18960 NONE
        cccB 3622561 .. 3622587 - -13.1  -4.91712   GTCAAGGCATAAAAA         CATCCTTGCCA GCACT CGGCAAGGATG         TTTTTATCTTACTTT 100 34
        ftsE 3621683 .. 3621693 -    -4  -2.76453   CGAGAATTTTAATCA                 TATG AAC CATA                 CTCCCCTCTTGACTC  46 8
        ftsX 3620756 .. 3620790 - -14.5  -3.95126   GAAAAAGAAGGCAAA    TG-AAAAGCCGTCCCG AAAA CGGAACGGCTTTTTCA     CTTTATACTCGCAGA 100 28
        ctpB 3619190 .. 3619209 -  -8.6  -3.91213   AAGCACAAAGAAACA            GGAGATGA AATA CCATCTCC             TTTAATTGACAAATA  80 27
        minJ 3617161 .. 3617196 - -20.5  -4.67608   CAGCGTAACACAAAA    CAGCCCGGCATCGCA TCATCC TGCGGTGCCGGGCTG     CCTTTTATGATCCCG 100 30
HCN55_RS18910 3611916 .. 3611940 - -11.6  -5.24129   TTTGTGTATAAAAAA          CCTGCTTTTA AAACG TAAAAGCAGG          TATTCAGTCTTTATA 100 56
        uvrB NONE
        uvrA 3606858 .. 3606896 - -11.1  -5.27335   TGCCGTAAAGAAAAA  GCTTGCCTGCTAAGCCCA AGGA TGGACTT-GCCGACAAGC   TGTCCCCTCTTAACA 100 48
HCN55_RS18885 NONE
HCN55_RS18880 NONE
HCN55_RS18875 NONE
HCN55_RS18870 3603594 .. 3603611 -  -8.4  -5.13473   ACCACATGTAAAAAA             GCTGCC TTTGCG GGCAGC              TTTTTTTATTTTTTT 100 31
HCN55_RS18855 NONE
        cypX 3599408 .. 3599429 - -10.1  -3.97602   ATATATGTAAAAAGA           GTCTCACCC GCAT GGGAGAGAC            CTTTGGAATTCTATT  85 39
HCN55_RS18840 3594881 .. 3594909 - -14.7  -5.60993   TCTTTCATAAAAAAA        GCCTCCAACCCTT TTT AAGGATTGGAGAC        ATGGCGAAAATCAAA 100 11
HCN55_RS18820 NONE
HCN55_RS18815 NONE
HCN55_RS18810 NONE
        ppaX NONE
        hprF 3588132 .. 3588155 - -12.5  -5.80364   ATTTTAACAAAAAAA          GTCCGCTGA TGTTAT TCAGCGGAC           TTTTTCAATCTTTCT 100 13
HCN55_RS18785 NONE
HCN55_RS18780 NONE
        hisD NONE
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
HCN55_RS18750 3579771 .. 3579789 -  -8.8  -5.54907   TTCACAAAACAAAAA             GAGCCGTA TCA TCCGGCTC             TTTACTCTTCAATCT 100 27
HCN55_RS18745 NONE
HCN55_RS18740 3576886 .. 3576898 -  -3.4  -3.09908   CTTTCTGAAAATAAG                GAAG TCACT CTTC                ATATTCCTCCTAAGA  45 35
HCN55_RS18735 3576499 .. 3576525 -  -8.1  -5.50723   TGATCAAAATAAAAA         TCTCCCACTCA TTGTT TGAATAGGAGA         TTTTTGTGTTAGACA 100 34
        bmrA 3574548 .. 3574570 -  -8.5   -4.1964   CTCAATAGTTCAAAA           GGAAGGATT GGGAA AATCCCTCC           TCTTTTTTATTGGCT  81 55
HCN55_RS18725 3572986 .. 3573008 -  -7.1   -5.8187   TATCTAACAAAAAAA           GAGTCGATT AAATA AATCAACTC           TTTAAAATTTACTAT 100 37
        cwlO 3571182 .. 3571205 -  -8.9  -4.68209   ATGTTAATAAAGAAA          GAGCCTTCT GTTTAT AGAAGGCCC           TTGTCATATTTATTA  90 38
        trxB 3569907 .. 3569934 -  -3.5  -5.64274   TTATGGACAAAAAAA        GGACACGGAT AACTGGAGA ATCCGTG-CC        AAAAAAGTGTATTCA  84 153
HCN55_RS18710 NONE
        rapZ NONE
        mgfK NONE
        whiA NONE
HCN55_RS18690 NONE
HCN55_RS18685 3565353 .. 3565373 - -11.9  -5.18726   TGTTCATAAGAAAAA            GCTTGCAGA TAA CCTGCAAGC            TTTTCACGTTACAAA 100 34
        psdR NONE
        psdS 3563163 .. 3563176 -  -2.3  -4.91109   TCTTTATTATAAAAA               GGAAG TCAG CATCC                TCCCATCGAACTTTC  66 62
        psdA NONE
        psdB 3560407 .. 3560428 - -14.5  -5.09521   TCAATAAATCAAAAA           TCCGGTCTG ATAA CAGACCGGA            TTTCATATTACATAC 100 33
HCN55_RS18650 NONE
HCN55_RS18645 3556812 .. 3556828 - -10.8  -5.28778   AGCATGCATAAAAAA              GCGGCC GCGAT GGCCGC              TTTTTTTAACCTGTG 100 31
HCN55_RS18635 3555686 .. 3555708 -  -9.2   -5.7827   AAGAGAAATAAAAAA           GAGATTTCCC TTA AGGAAACCTC           ACTTTGTTAAAAACA 100 112
HCN55_RS18630 3554631 .. 3554641 -    -4  -3.76568   TTACCGATAACAGAA                 TAAG GCG CTTA                 CAGCGTTGATTCTCG  54 23
        mdxD 3552694 .. 3552704 -    -4  -3.62849   TTTACGAAACTATAA                 CAAT TGT ATTG                 TCCTATAGAAAGCGG  52 78
        mdxE NONE
        mdxF NONE
        mdxG NONE
HCN55_RS18605 NONE
        mdxK NONE
        malL NONE
        pgmB 3543691 .. 3543716 - -13.4  -3.88015   AAAGTAATAACACAA         CCTGCAAGAG CTGCGT CTCTTGCAGG          TTTTTTTCATTTCAA 100 37
HCN55_RS18580 3542407 .. 3542421 -  -2.8   -4.6635   AAATTGCGAACAAAA               CAAACT TAC AGCCTG               CGAATCAATTTATAG  65 348
HCN55_RS18570 3539647 .. 3539691 -  -3.8  -5.04868   TGAAATGAAACAAAA CAAAAAAGACAA-GA-GTGGCA AGT TGCCAAACCATTGTCTTTCCTG TTGTTTGATTGGACG  72 132
HCN55_RS18565 3539005 .. 3539026 - -11.7  -3.75115   TCTTCATAAAATCAA           GGCATATAC AGCT GTATATGCC            TTTGCCATTAAGCTT  91 33
HCN55_RS18530 NONE
        racX 3530241 .. 3530266 -   -12  -5.82172   AGGAACATAAAAAAA         CAAGGACTGT TTGAAG ACAGTCCTTG          TCTGAAGCTAGCTTT 100 33
HCN55_RS18520 NONE
        padC 3529131 .. 3529172 - -20.5  -4.76041   CATACTCAGCAAAAA GAAAACCCGGAAAAGAGAA GTAA TTCTCTTTTCCGGGTTTTT  ATGTTTATTATAATC 100 33
HCN55_RS18495 NONE
        epsB 3525240 .. 3525258 -  -7.4  -3.10894   ACGACCAGCATCTAA             GGCAGC AACTTCA GCTGCC             CACAGCAGAGCCGAG  62 84
HCN55_RS18485 NONE
HCN55_RS18480 NONE
        epsE NONE
HCN55_RS18470 NONE
        epsG NONE
HCN55_RS18460 NONE
HCN55_RS18455 NONE
HCN55_RS18450 NONE
HCN55_RS18445 NONE
HCN55_RS18440 NONE
HCN55_RS18435 NONE
HCN55_RS18430 NONE
HCN55_RS18425 3510962 .. 3510988 - -11.7  -4.80487   GAGAATCAAAATAAA        CCTTCC-GCTCA CATG TGAGCAGGAAGG         TTTTCCTTCTTTGAG 100 7
        rpoN 3509332 .. 3509350 - -10.3  -5.41143   GATTCCTTAAAAAAA             TCCTCCC GTCTA GGGAGGA             TTTTATTTATATCGC 100 28
        lutR 3506610 .. 3506633 -  -9.6  -4.65895   GCTGCCATGTAAAAA          GACTGAACCA TTTG CGGCTCAGTC           TCAGTTGTTCGTATC  91 78
        ganR 3505491 .. 3505510 -  -9.4  -5.65927   TACCTAAATAAAAAA            TGACTTAG TGTC CTAAGTCA             TCCTTAATTCATACT 100 29
        ganS NONE
        ganP NONE
        ganQ NONE
        ganA 3499848 .. 3499866 -  -8.8  -4.77122   CTATAGAAAAAAGAA             TCCGCCCA TAT CGAGCGGA             GCATCAGCCTAATGT 100 34
        ganB 3498455 .. 3498498 -  -9.8  -5.10933   TGATGTAAAATAAAA TGATCCATGAGACATAACAA TGAT TTGTTACATCTCATGGATTT TTTTGTTTCAGCGTT 100 33
HCN55_RS18360 NONE
HCN55_RS18355 NONE
        yvfT 3493324 .. 3493343 -  -3.6  -3.72374   CCTCAGCAATAAACA            GACGAA TCATTCTT TTCGTC             CTCCAATCATTCTGC  54 32
        yvfU 3492699 .. 3492720 -  -8.7   -4.8048   GTGGCATATCAAAAA           CACTCCCGA TCTC CCAGGAGTG            CAGTATATGGTTAGA 100 36
        lutA NONE
        lutB NONE
HCN55_RS18330 3489621 .. 3489642 -   -13   -4.8622   TTTTTCAAGCAAAAA           GCCCGGCA TATGCC TGCCGGGC            TTCCTGAGTTCAGCG 100 35
HCN55_RS18325 3488148 .. 3488192 - -10.9  -5.93252   TTCAAAAACAAAAAA GCCCGCCGTCTC-CTACCTA ATCTAA TAGATAAAGAGACGACGAGC CTTCGGCTGACCGCG 100 343
HCN55_RS18320 3486731 .. 3486756 - -19.1  -5.34365   GCACAATAATAAAAA         CCCTCTTGCCG GATG CGGCAAGAGGG          TTTCTTATTTACTGA 100 34
HCN55_RS18310 3484779 .. 3484799 -  -4.1  -4.72497   CATTCAGGAATAAAA            GAATTTGAT TCG ATGAAATTC            GAACAATATAAAACG  69 55
HCN55_RS18305 3483619 .. 3483647 -  -6.8  -5.87996   GAATGAATAAAAAAA       GCAATGTA-TGGG TCTC CCCGCTACATTGC        TTTTTTTATAGCTGT  93 40
        araE 3480887 .. 3480910 - -13.2  -4.20368   GCATCCCAATATAAA          CAGCCCTTCC CGTA GAAAGGGCTG           TTTCATTAAAGCGTT 100 42
        cggR NONE
         gap 3478463 .. 3478487 - -12.2  -4.65895   GTCTTCATGGAAAAA          GGGAAAGGGA GTCCG TCCCCTTCCC          TTGTCCGCTTTCATT 100 91
HCN55_RS18280 NONE
HCN55_RS18275 NONE
        gpmI NONE
         eno 3473378 .. 3473402 -  -9.2  -5.42265   TGAAAGCATAAAAAA          GCCGCCGAGA GAAAA TCCCGGCGGT          CTTTTTATTACTTGT 100 33
HCN55_RS18255 3470929 .. 3470958 - -20.9  -4.56775   ATGCTCTTTTAAAAA       CAACCCCATCACC TGCT GGTGATGGGGTTG        TTTTATTGAATAGAC 100 28
HCN55_RS18240 3468658 .. 3468691 -  -8.2  -5.07652   GTGCCGAAAACAAAA     GAATGCAGCTCTCT AAAATA AGAGAGCTGCTTTT      TGCATCATGAAGTTA 100 30
HCN55_RS18230 NONE
       opuCB NONE
HCN55_RS18220 NONE
       opuCD 3464386 .. 3464414 -  -7.5  -5.47218   GTTTATTTAAAAAAA        CCACCTCTGTT GTATTTA AATAGAGGTGG        TTTTTCTATCAGCTA 100 12
        sdpR NONE
        sdpI 3463257 .. 3463284 - -18.6  -2.61727   ATCCATTATAATTGA        GTGTCTTGCGGA TTGC TCCGCAAGACAC         TTTTTCAACGTGAAC 100 30
HCN55_RS18180 NONE
       opuBB NONE
HCN55_RS18170 NONE
       opuBD 3456632 .. 3456650 - -14.6  -5.56264   TTTAAAGAGAAAAAA             GAGGCTGG ACT CCAGCCTC             TTTTTCTATTCTATG 100 36
HCN55_RS18140 3453108 .. 3453124 -  -3.5   -4.7219   CATAGGAATAGAAAA              CGCTTGG CTT CCTTGCG              TTTTTTGTTACTTTA  67 38
        secG 3451880 .. 3451903 -    -4  -5.71983   TTAATCAGAAAAAAA          CGTTT-TGAAT ATC ATCCAGAAACG          TGAAAAAGGCCTGAC  85 70
HCN55_RS18125 NONE
         rnr 3448679 .. 3448706 - -10.7  -4.41348   TGTTTCCGAAAGAAA        GCAAATAGAGC GCTGCG GCCCTATTTGC         TGGTTGAGCTGCTAT  95 37
        smpB 3448068 .. 3448100 -  -8.6  -2.92175   CGTGAACACAGTATA     GCACAG-GCCTGATT TTCG AATCAAGCACTATGC      CTTTAGAAGCCTTTT  69 28
        ssrA 3447522 .. 3447553 -   -19  -5.24129   GGTTTGGAGAAAAAA      TAAAGCAGAACCTC TTAA GAGGTTCTGCTTTA       TTGTCAGTATGTATG 100 36
HCN55_RS18105 3446567 .. 3446585 - -10.3  -5.80248   CAATATATAAAAAAA             CCTCTCC TATTG GGAGAGG             TTTAAAAGACACTGC 100 27
HCN55_RS18100 NONE
HCN55_RS18095 NONE
HCN55_RS18090 3445093 .. 3445113 -  -6.9  -5.67063   CGCACGATAAAAAAA            CAGAGAC TTATACC GTCTCTG            CTTCATTACATCAGT 100 62
HCN55_RS18085 3443037 .. 3443052 -  -4.8  -4.66625   ATAGAGACAAAGAAA              TTTACT TTCA AGTAAA               ACATCTCGAATTAAA  71 65
HCN55_RS18080 3442263 .. 3442294 - -13.1  -4.30576   GCTGGAGCACTAAAA      CAAAAGCCTCCCC AAATAA GGGGAGGCTTTTT       CATTAGAATGTTTTT 100 28
        csoR 3440721 .. 3440731 -  -4.6  -2.79796   TTTCATCCTACCATA                 CCCC CGT AGGG                 TATTACAATAAAAAA  48 45
        copZ 3440435 .. 3440460 - -14.1  -4.71307   TAAAAATGAAAGAAA         TATCGCGCCTC CCTA AAGGCGCGATA          CCTTGAATCACTTGG 100 33
HCN55_RS18060 3437951 .. 3437977 -  -9.5  -4.86621   AGTGTCAATGAAAAA         CAAAAACCGGC ATATA GCCGGTTTTTC         ATTTTACTTTTTGCA 100 24
        cadA 3435620 .. 3435645 -  -7.6  -5.46698   TTTAAAATTAAAAAA         GAAGCGGATC GCAATT GACCCACTTC          TTTATTTTAACAAGA 100 88
        bdbD NONE
HCN55_RS18045 3434470 .. 3434490 - -11.1  -5.37593   TGCGAAATTAAAAAA            GCGCCCG GCATACG CGGGCGC            TTTTTTTGTTATTCA 100 34
HCN55_RS18040 3433672 .. 3433692 - -10.5  -5.64274   TTATGCAGAAAAAAA            CCGATTTCA CTT CGAAATCGG            TTTTTTTGCTATTAA 100 37
        helD 3431163 .. 3431180 -  -9.9  -5.56264   TGTAAATAGAAAAAA             GAGAAGG ACTC CCTTCTC              TTCATTCAGCAATCT 100 27
HCN55_RS18030 3429207 .. 3429217 -  -6.8   -2.7709   AATCAATATACATCA                 CGCT GAT AGCG                 TTTTTGCTGCTGCAT  58 2
        cysI 3427415 .. 3427439 - -15.1  -5.43487   AAATTATAGAAAAAA          GAGACAGGAAG CTA CTCCCTGTCTC          TCGTCTTTCTTTCTC 100 39
HCN55_RS18020 3425153 .. 3425172 - -11.4  -5.80817   CTTAATATAAAAAAA            GCTGGCGC TCTA ACGCCAGC             TTTTTTTCTGCATTT 100 39
        pgoN 3423579 .. 3423595 - -10.1  -5.54894   AACGCACTAAAAAAA              CTCCCCA TAA CGGGGAG              TTTTTTGATTAAAAC 100 34
HCN55_RS17995 3421068 .. 3421085 -  -9.9  -5.26875   TTCCGAATGAAAAAA             TCCCTCT ATCA AGAGGGA              TTTTTTACGTTTCCA 100 30
        sspJ 3418288 .. 3418314 - -13.8  -4.28375   GGAACAGATGGAAAA         TACGGATAGAGC CAA GCCCTATCCGCA         TGTGGTTATCGATTA 100 31
HCN55_RS17975 3416482 .. 3416504 - -12.1  -5.26316   TGATTTTATAAAAAA           GACACCTGA GCAAA TCAGGTGTC           TTTTCATTATGCTTG 100 32
HCN55_RS17965 NONE
HCN55_RS17960 3413044 .. 3413055 -    -3  -2.57132   TGTTCCGTTGATAAT                GAAT TCAT ATTC                 GGCCCCCTCCTCTAA  41 37
HCN55_RS17955 3412218 .. 3412236 -   -11  -6.09888   GCCGAATAAAAAAAA             TCCCGGCT TCA AACCGGGA             TTTTTTCATACAGTA 100 31
HCN55_RS17950 NONE
HCN55_RS17945 NONE
HCN55_RS17940 3408955 .. 3408979 -  -9.4  -5.47218   TCCCAGCTAAAAAAA         GAACGCATTCC AATT GGA-TGCGTTC          TTTTTATTCATAGCG 100 29
        sigO NONE
        rsoA 3406029 .. 3406046 -  -4.8  -5.36314   CAAAACAGCAAAAAA             GGAGCA AACAAG CGCTCC              CTTTTGATGTTTTTT  84 53
        yvrH NONE
        yvrG NONE
HCN55_RS17900 3402492 .. 3402512 - -12.6  -5.67063   TGTAGTATAAAAAAA            CGCATCCG TGTTT CGGATGCG            TTTTTTTTATACGTC 100 32
HCN55_RS17890 NONE
HCN55_RS17885 NONE
HCN55_RS17880 NONE
HCN55_RS17875 3397351 .. 3397376 - -12.6  -6.20267   TGAAAAACAAAAAAA         GCCGGCATGT ATTTGA ACACGCCGGC          TTTCCTTTTCACTTT 100 41
HCN55_RS17870 3395914 .. 3395934 - -12.6  -5.61596   ATTGGCACAAAAAAA            CGCCATGC ACGAG GCATGGCG            TTTTAAAACCCTTTA 100 38
        liaI NONE
HCN55_RS17860 3394670 .. 3394687 -  -6.3  -3.17194   ACGTGCGGAAGGGAA             GGACTTG ACCG CAAATCC              TTCCCCGTTCCGCTT  58 39
HCN55_RS17855 NONE
        liaF NONE
        liaS NONE
        liaR 3391242 .. 3391254 -  -4.1  -2.88544   TGTGATTGTCAGAGA                CTTCG GAA CGAAA                GGCGCAAACAAATAG  46 48
HCN55_RS17820 NONE
        fumC 3385835 .. 3385883 - -19.1  -3.55966   TTATTAAAACAGCAA CATATTTAGAAGAACGGCTGCTT AAA AAGCAGCCGTTCTTCCTATTACG CCTTTGGTTTTACCA 100 21
HCN55_RS17805 3384133 .. 3384143 -  -2.6  -5.61596   AGCTGGAGAAAAAAA                 TAAA GGA TTTA                 TTATATTTAACGAAG  89 518
        htrB 3380889 .. 3380911 -  -9.2  -5.46657   TAGGGTAACAAAAAA           GCTGAACC TTAATCG GGTTCAGC           TTTTTGTTTTTTCTT 100 39
HCN55_RS17770 3376943 .. 3376957 -  -3.6  -2.90028   TGTAGCAGAAAACAC               TGACTT TGA AAATCA               TTTTCAATTAGTTTT  46 80
HCN55_RS17765 3375924 .. 3375960 - -14.7  -5.00616   TTCCTTTCGAAAAAA   CAGC-AAGGAGCTTTC TCAATT GAAAGCTCCTTCGCTG    CGTTATTTATCCATG 100 32
HCN55_RS17760 3375622 .. 3375647 -  -9.8  -5.37345   CTGAATCACAAAAAA         GCAGTCTGCT ATAATG AACAGACTGC          TTTTTGGCTATTGTT 100 33
HCN55_RS17745 3373444 .. 3373467 - -13.8  -2.77148   CCCATTAATAGAGCA          CCCCGCGGGT ATCA ATCCGCGGGG           TTTTTTATTCAATCA 100 30
HCN55_RS17720 3369395 .. 3369411 -  -6.5  -2.54632   GAAGCCTATAAAAGT              CGGGC AACTTAA GCCCG              GAGGTGAAGGGAATG  57 209
HCN55_RS17710 NONE
HCN55_RS17705 NONE
        fadE 3363865 .. 3363886 - -15.9  -5.00616   GTGCTTCTTAAAAAA           GAGCTCCGC GCAT GCGGAGCTC            ATGGCCAATCAGACA 100 34
HCN55_RS17695 NONE
        gcvH 3362922 .. 3362939 -  -2.7  -2.64155   GTTTGTCGAAAGCCA             TATTGGA CACC TCCCATA              ACGTTAGCGTGTCCA  41 64
HCN55_RS17685 3362663 .. 3362681 -   -11  -4.20817   CAGATTGTAAAAGAA             GGCAGTGA AAT TCACCGCC             AACATTAACACCAGC  90 30
HCN55_RS17680 NONE
HCN55_RS17675 3361895 .. 3361905 -    -4   -2.9652   TTATAAAACGAACGA                 CAAT TTC ATTG                 GATATGCTGAGAAAT  47 44
HCN55_RS17670 3361207 .. 3361234 - -14.2  -5.07652   TTCTGCAAAAGAAAA        GCCTTTCTGCAC ACTT GAGCAGAAAGGC         TTATATAAAATGCCT 100 264
HCN55_RS17665 NONE
        metP NONE
        metQ 3358593 .. 3358613 -  -9.7  -5.46629   AATACGCGAAAAAAA            CCCCGGA ATTCTCA TCCGGGG            TTTCAGTCTTATTCA 100 34
HCN55_RS17650 3358107 .. 3358122 -    -4  -2.85668   TAGCGGCAGATGAGA              CGAAAG CATC CTTTCA               GAACAAATGAGAATG  46 63
HCN55_RS17645 3357792 .. 3357807 -  -6.8  -5.63236   ATTGAAAAAGAAAAA              GAGTGG ATTC CCACCC               TTTTTTAAAAGATTG  93 47
        sufC NONE
        sufD NONE
        sufS NONE
        sufU NONE
        sufB 3352340 .. 3352366 - -16.8  -5.26119   CTCTGAAAAATAAAA         GAAGACGAACTT CAA AAGTTCGTCTTC         TACAATCAAATTCGG 100 107
HCN55_RS17615 3351820 .. 3351833 -  -2.4  -3.43071   TTCGATATGAATGAA               GCAT GGTACT ATGC                TAACAATCTGGCTAC  45 92
        glxB 3351347 .. 3351367 - -10.4  -5.31545   AAGAAGAGTAAAAAA           CCGC-GGCC CCTC GGCCAGCGG            TTTTTCTTCTGCATA 100 64
HCN55_RS17595 3349601 .. 3349611 -  -3.2  -5.24647   ATACAGAAAAGAAAA                 GCTA GAA CAGC                 TTTATTATATTTGTT  73 58
HCN55_RS17590 3349114 .. 3349138 - -10.8  -4.55128   ATGCCCAAATCAAAA          GCCAGAACTT GACTT AAGCTCTGGC          TTCGCTGTTCAATCC  95 54
HCN55_RS17585 3347909 .. 3347936 -   -13  -2.62184   CTCCTCTGGACATTA        GACTATAATGTT ATAT AACATTATAGTC         TAATGCATAATGGTT  85 54
HCN55_RS17580 3346584 .. 3346609 -  -7.7  -4.82901   TCTCCTTTATAAAAA         GAAAAGGTG CGAAGCTT CACCTTTTC          TTTGATTTATTCAGC  88 32
HCN55_RS17575 NONE
HCN55_RS17570 NONE
HCN55_RS17565 3343514 .. 3343539 -  -2.5  -3.66666   CCGAAAAGCTTCAAA         TCCAACCCGAG AGCC CTGTGGTTGAA          TTAAAACGGATTTTA  50 392
        ugpC 3341839 .. 3341860 - -14.5  -5.06414   TGGCCGTAAGAAAAA           GGTGCTCCT TTTG AGGAGCACC            TTTTTCTAATACACA 100 31
        allC NONE
        pucG 3337993 .. 3338012 - -13.6  -4.61231   TCATATCGTTAAAAA            GCTTGCGG AGTT CCGCAAGC             TTTTCTTTACACCGC 100 32
HCN55_RS17530 NONE
        pucB NONE
        pucC NONE
        pucD NONE
        pucE 3332595 .. 3332616 - -14.5  -5.05782   ACTGAGGCTAAAAAA           GTCCGGCTT TTAA AAGCCGGAC            TCCCGTCTACCCCCG 100 13
HCN55_RS17470 NONE
HCN55_RS17465 3322781 .. 3322794 -  -2.3  -4.64861   CTTTTCTAAAATAAA               TCGAG CTGT CTCGG                AGCAAGTCCGCTGTA  61 2
HCN55_RS17460 NONE
HCN55_RS17455 3320468 .. 3320500 -  -2.1  -2.74012   TTACCACGTCAACCA     CTCCCTTCATTCAT CACTTT ATG-ATGAAGGGCA      CAGCTTGTTGTGGGC  40 49
HCN55_RS17450 3320087 .. 3320126 - -10.2  -4.63486   ATCTTGGCAAGAAAA  TCCCCCCTTACATATCACA ATG TATGCT-TGTAAGAGGGGA  CATAGTAATAGCCGG  91 53
        yunB 3319283 .. 3319330 -  -8.6  -5.63374   TGAATACCAAAAAAA GAAGTAACAAA-AAGCCGCCTCT TCA ACAGGCGGCTTATTTGCTGCTTT TTTCTTTTTTTGAAT 100 12
        lipA 3317147 .. 3317175 - -14.7  -2.82291   AATCGATAGGAATGA        CAAAAACGCCAGA TGA TCTGGCGTTTTGG        CATTATGCTTGTGCT 100 28
HCN55_RS17425 NONE
HCN55_RS17420 NONE
        nucF 3314857 .. 3314877 - -14.7  -3.92996   CGGCATACAGAATAA            GGGCACCCT TTT AGGGCGCCC            TTTTTTCAAATGTAT 100 31
       cotNH 3313028 .. 3313040 -  -2.7  -2.96779   CTTGGAAAAGACAAT                TGTTA ACT CAACA                CAGACATATAAGTTA  43 169
HCN55_RS17400 NONE
HCN55_RS17395 NONE
HCN55_RS17390 3309661 .. 3309687 -  -6.5  -5.86061   CTCCAGCAAAAAAAA        GCGC-CCTCCGC TGAC GCTGAGGAACGC         TTGGCATGATCTATA  93 36
HCN55_RS17385 3307583 .. 3307609 - -16.7  -3.10244   TCTTTTAATAAAGCA         GCCAGGCTGAT ATTTG ATCAGCCTGGC         TTTTTTATTAGAGAT 100 33
HCN55_RS17375 3306802 .. 3306820 - -10.3   -3.9467   AATGATAGAGAAGAA             CCGCTGA TCAAG TCAGCGG             TTTTCTGTATACCCA  88 19
HCN55_RS17365 3305200 .. 3305215 - -10.4  -5.79595   CGGCAAAATAAAAAA              GGGCCT GTCC AGGCCC               TTTTCTTTAAAACAT 100 32
HCN55_RS17360 3303833 .. 3303866 - -17.7  -2.87132   CCCGTTTTTCATACA     TAAAAGCTCCTTGCA CTGA CGCAAGGAGCTTTTA      TCGTTTATATAAACA 100 30
HCN55_RS17355 NONE
HCN55_RS17350 3302386 .. 3302422 -   -11  -5.18726   TCCCCATAATAAAAA    CGCCTCCCTTAACGAT GATTT ATCGCTAAGAAAAGCG    TCAGTAATAGTTGCT 100 56
        paiA NONE
        paiB 3300888 .. 3300920 - -12.8  -5.71983   TTAATCATAAAAAAA     CGCCAAGTC-AGCGG TTCT CCGCTTGAGTTGGCG      TTTTCTGCTACTTCT 100 55
HCN55_RS17330 3299447 .. 3299472 - -12.7  -6.01369   TAAATAATAAAAAAA         GGAGCTTGTGTC TGC GACACA-GCTCC         TTTTTTATTTGAAGA 100 30
HCN55_RS17320 3296871 .. 3296884 -  -9.5  -5.09762   TTTTAATAAAGAAAA               CCCGC TTCC GCGGG                TTTTTAGAAAAACTT 100 29
HCN55_RS17315 3296520 .. 3296569 -  -5.9  -2.65521   GGCAGACTAATCAAC CTATTCCACCCCCCTGCGTT GTTTTTAGTGT AACGC-GGGGGCTGAAATAA AGTCAACGGCTGGAA  54 28
HCN55_RS17310 3296174 .. 3296192 - -10.4  -5.66684   GAACGCATAAAAAAA             GCTTTCTT TAG AAGAAAGC             GGCATTTAAAACATT 100 31
        spsC 3295414 .. 3295435 - -11.5  -5.81412   TTCATGTAAAAAAAA           CGCTCCTGC TTTC GCTGGAGCG            TTTTATTCTTTCACC 100 28
HCN55_RS17295 3293239 .. 3293263 - -12.9   -5.4505   TTTCGGAAGAAAAAA          TCCCTGCCGCA TCA TACAGCAGGGA          TTTTTCATTACTCGT 100 33
HCN55_RS17290 3291768 .. 3291789 -   -13  -4.59069   ATCATAACGAGAAAA           GGCTCCCC AGTAAA GGGGAGCC            TTTTTCCTATAAAAC 100 32
HCN55_RS17280 3290337 .. 3290360 -  -5.4   -5.4505   TTCCCGAATAAAAAA          GGCACCTTGAT CAA AT-AAGGTACC          TGCAGACTATCAATA  88 92
        besA 3289331 .. 3289349 - -10.3  -3.27525   TTTTTTTAAAGGCAA             GGCTGAG TATGT CTCAGCC             CATTGATAGATGCGG  79 20
HCN55_RS17270 NONE
        dhbC NONE
HCN55_RS17260 NONE
HCN55_RS17255 3284540 .. 3284552 -  -2.6   -3.0353   CCTTTTATAAATAAT                CCGC GTTTG GCAG                CACTTGCTGGCTGCG  43 2
        dhbF NONE
HCN55_RS17245 3277115 .. 3277135 - -11.2  -5.10064   CGTAAGATAGAAAAA            GAGACTGC GGCAA GCAGTCTC            TTTTTGATAAGATTA 100 38
HCN55_RS17225 3272945 .. 3272982 -  -9.1  -2.88861   GATCACCCTTACATA   GAAAGAGCGCCGTCTTC TTTT GAATCAGGCGCTCCTTC    CCTTTCATACTGTTA  69 38
        yukD NONE
        essB 3271258 .. 3271268 -  -2.4  -2.85985   ATAATAGACTCAAAT                 GGCG AAC CCCC                 TTACGGCCGAATGGC  41 73
        essC NONE
        esaA 3263495 .. 3263531 -   -11  -3.16088   AGAGGGTATGAAAAG    GGAAAAGGAGAGCATA CAAAT CATGATCCCCTTTTCC    ATGCTGCGATCACGC  80 35
        essA 3262985 .. 3262998 -  -3.1  -4.08706   CGGTGATGATATAAA               GTTCC ATTG GAAAC                CTCCTTTTCCGTTAT  57 81
HCN55_RS17195 3262242 .. 3262260 -  -8.9  -5.93809   TTTGTATAAAAAAAA             GAGCAGA AAATA TCTGCTC             TACAAAAACTCTTTA 100 25
HCN55_RS17190 3261414 .. 3261425 -  -5.8  -2.97245   TTATGGATAATGACA                CAGG CTTA CCTG                 ATAAAACAAAGGGGT  56 132
HCN55_RS17185 3261076 .. 3261098 -  -2.7  -4.74103   CGCTTAACTGAAAAA          TAGGACGTCC TGTT GTACG-CCTA           TTTTTCATGCGCAAG  65 46
HCN55_RS17175 NONE
HCN55_RS17170 3259159 .. 3259187 - -13.3  -5.60689   TTATACAATAAAAAA        GCAACAGCCTCTT GTG AAAAGGCTGTTAC        CCGTTAAACGAAACT 100 22
HCN55_RS17165 NONE
HCN55_RS17160 3258372 .. 3258390 - -11.8   -5.1356   TGCCATGAACAAAAA             GACAAACG GTC CGTTTGTC             TCTTACGATTTCAGT 100 28
HCN55_RS17155 NONE
HCN55_RS17150 3256215 .. 3256259 - -14.7  -3.17888   AAAATAATATATACA TAAAGAAAA-CTGGCCCTTC GCGAAT GAAAGGCCAGTTTTTCTTTA TTCTTCCTCAAGCTC 100 23
        pdeH 3254452 .. 3254475 -  -4.5   -4.7889   ACAAACACCGAAAAA          GACCGCAAC GCTAAA GTTGTGGCC           TTTTCGCTTTGTCAT  71 441
        degQ 3253926 .. 3253941 -  -7.6  -5.98781   TAGAACGAAAAAAAA              GACTTG TTTC CAAGTC               TTTTTCACGAAATTT 100 30
        comQ NONE
HCN55_RS17120 NONE
HCN55_RS17115 3250345 .. 3250364 - -12.2  -5.26316   CCATTTTATAAAAAA            GACTTGGC CTGT GCCAAGTC             GTTTCCGTTATAAAT 100 44
        comA NONE
HCN55_RS17105 3249228 .. 3249253 -  -7.6  -3.31603   ATTTATAAAAATAAG         CAGCCGGA CAGGCAGAGT TCCGGCTG          TTTTTTTATTTCTTG  67 31
HCN55_RS17065 3242978 .. 3243000 -  -9.2  -4.40003   CTTCATAAACAGAAA           GAGTTCCG TTTTATG CGGAACTC           TTTTTTTATTTATTC  91 31
HCN55_RS17025 3233268 .. 3233295 - -17.2  -3.64682   CACCAAACGCTGAAA        TGGCTAGCTTAC ACAG GTAAGCTAGCCA         TTATGCTATTATAAA 100 6
HCN55_RS17005 3229318 .. 3229329 -    -3  -2.56122   TCCGATCAGAAAATG                CTAT CTTT ATAG                 TATATCAATTCCCCT  41 54
        kapD 3228163 .. 3228176 -  -2.3  -4.58663   AGCAGCTTCCAAAAA               GGCAC TACG GTGAC                CATTAAGCTTCCCGC  61 515
HCN55_RS16980 3225265 .. 3225279 -  -7.1  -6.01369   CAAATAACAAAAAAA               CCGGT GCTGA ACCGG               TTTTTTTAAGGCGTG 100 31
HCN55_RS16970 NONE
HCN55_RS16965 3222547 .. 3222588 -  -3.7  -4.81551   TATGCACAGCAAAAA GGGGGTAAACTGAAAATACC AAA GGCTTTCT-AGTATTCCCCC CTTTTATTGGATGCG  69 63
        yugI 3221997 .. 3222020 - -13.2  -4.58773   TGCATGAAATCAAAA          GCACCGAACA TTCC TGTCCGGTGC           TTTTTTCATGCTTAT 100 37
HCN55_RS16950 3220293 .. 3220318 -  -9.7   -5.8096   GACAAAAAAGAAAAA         GGGAAGCAGCC AAAC GGCTATTTCCC          CTTTTTTTATAGTGA 100 32
HCN55_RS16945 3219018 .. 3219041 - -12.5   -4.4846   CAAGTCAAGAAGAAA          GGGCGGAAT GACTGG ATTCCGCCC           TTTGGGTTTATAGAG 100 33
HCN55_RS16940 3217552 .. 3217575 - -12.4  -4.85599   CTGATTTTATAAAAA          GCCGACCGGC AAAT GCCAGTCAGC           TTTCTCACATTAATC 100 35
HCN55_RS16935 NONE
HCN55_RS16930 3216625 .. 3216648 -  -6.7  -5.72616   AGGCATACAAAAAAA          GGAGGGG CCGATGCTTT CCCCTCC           TCTTACATACAAGGT 100 68
HCN55_RS16915 NONE
HCN55_RS16910 3214312 .. 3214335 -  -9.6  -5.73672   AAATAAGCAAAAAAA          GCCCTTACCA TAAA TGGTAAGGGG           CCACCTCCTTAACGT 100 40
HCN55_RS16905 3212989 .. 3213009 -  -5.4  -5.39721   TGATGACACAAAAAA            CAGCCG TTTGTTCCC CGGCTG            TTTTTTATCAAAAAT  86 33
HCN55_RS16900 3211206 .. 3211224 -  -8.8  -6.14618   GATAAAACAAAAAAA             CTCCAGTC TAA GGCTGGAG             TTTAGCACCATAGAT 100 27
HCN55_RS16895 NONE
HCN55_RS16890 3210625 .. 3210638 -  -3.1  -3.89346   CCTTCATTCGATAAA               GCCGCA GCG TG-GGC               GGGTGTGACAAGCCC  55 95
HCN55_RS16885 3210186 .. 3210216 -  -6.1  -4.56775   ATCGTCCGCTAAAAA       GCCCCATCGCC TATTTTCCG GACGATGGGGT       TTCAAATGCCTTTCG  76 5
        mcpB 3207269 .. 3207287 - -10.3  -5.74122   TACCATATAAAAAAA             CAGCGCT TTGAT AGCGCTG             TTTTTCGGTTTTTAC 100 37
        tlpA NONE
        mcpA 3202988 .. 3203012 - -11.5  -6.11019   AAAAACTAAAAAAAA          CACCCAAGC GCAACAA GCTTGGGTG          TTAAGGCTTATTATT 100 36
        tlpB 3200889 .. 3200912 - -11.8   -5.7946   TTTTTAACAAAAAAA          GAAAGCAGCA GATA TGCCGCTTTC           TCGTTTCATTATGAT 100 34
HCN55_RS16855 NONE
        rhaR NONE
        rhaB NONE
        rhaM NONE
        rhaA 3194752 .. 3194779 -  -9.9  -5.47399   TCAAGCTTAAAAAAA       TCCGCCCGCGTGC AAAT GC-CGC-GGCGGA        TTTTTTATTAGACAA 100 33
HCN55_RS16825 3192361 .. 3192373 -  -5.5  -3.48593   TATTTTTTTACATAA                CGGGA GCT TCCCA                TAAATGGAAAGCCCG  58 64
HCN55_RS16820 3191458 .. 3191479 -  -8.8  -5.38951   AATTGACAGAAAAAA           TAAGGCTC GGAAAA GAGCCTTA            TTTTTCGACTTACAT 100 35
HCN55_RS16815 3191282 .. 3191298 -  -9.5  -6.09196   CTCAAAACAAAAAAA              CCCTTAT CGA ATAAGGG              TTTAAAGGTATGGAG 100 34
HCN55_RS16805 3188656 .. 3188688 - -10.9  -4.23434   GAAAAGATTGCAAAA      TAAAAACCTTTTC GCTCAAT GAAAAGGTTTTTA      CCATGTTTCTATTTT  90 34
        lytG 3187619 .. 3187652 -  -5.3  -2.72973   TTAAAAAGTGATAAC     TTCCGTGGAATATTA TACC TCAAATTCCCCGGAA      TGGAACAAAGAATTA  51 61
HCN55_RS16795 3187292 .. 3187311 - -10.7  -5.58454   GTGATATCAAAAAAA            TCCGGCG TGCAGT CGCCGGA             TTTTTTATGATTCGA 100 30
        betB NONE
        gbsB 3180692 .. 3180714 - -10.6  -5.06451   CATTATCCCAAAAAA           TCCCGCTC TGTAAAG GAGCGGGA           TTTTGATTATACCGT 100 32
HCN55_RS16760 3180029 .. 3180074 - -16.5  -4.28115   ATGAAAGAAATTAAA GAAAAGATAGAAAGGGCCTGAT TTA ATCAGACCCTTTCTG-CTTTTC GTTTGACTTTTCGCT 100 6
HCN55_RS16750 NONE
        floT NONE
HCN55_RS16740 3176741 .. 3176778 - -14.3  -4.26189   TGACAAAGCGTAAAA   GTAACAATCCCCCAGCGA ATT CCGCTGGGGGATTTTT-C   GTTATCTGTTAAGAA 100 27
HCN55_RS16730 3173852 .. 3173877 - -11.3  -2.72371   GTTTTCAAAGAACAC         GTTTCGAAGGA ATGA TCCTTCAAAAC          TAAACAAGACAGGGA  78 88
HCN55_RS16725 3170794 .. 3170811 -  -8.5  -4.49556   TCGCCACCAAACAAA             TTGAGAG TGTT CTCTCAA              AACTAGATAACAGGT  86 55
         rrf NONE
HCN55_RS16715 NONE
HCN55_RS16710 3170452 .. 3170464 -  -3.5  -3.09648   CAATAGACTTGAATA                TTATA TCA TATAA                AAGTGGTGCCGGCAA  45 29
HCN55_RS16705 NONE
HCN55_RS16700 3170243 .. 3170271 -  -4.5  -3.09516   TGTTCTACCACTGAA        CTACTTCCGCA GAAATGG TGCGGATGAAG        GGACTTGAACCCCCA  50 12
HCN55_RS16695 NONE
HCN55_RS16690 3170078 .. 3170088 -  -2.4  -3.36823   GGGCGCAAAACTTAA                 TGCC GAG GGCC                 GGACTTGAACCGGCA  45 15
HCN55_RS16685 NONE
HCN55_RS16680 NONE
HCN55_RS16675 NONE
HCN55_RS16670 NONE
HCN55_RS16665 NONE
HCN55_RS16660 NONE
HCN55_RS16655 NONE
HCN55_RS16650 NONE
HCN55_RS16645 NONE
HCN55_RS16640 3169168 .. 3169191 -  -2.4  -2.98493   TTTACCACTAAACTA          CACCCGCAATT TTT ATTTG-GGGCG          ATTGATGGGAATCGA  42 19
HCN55_RS16635 NONE
HCN55_RS16630 NONE
HCN55_RS16625 NONE
HCN55_RS16620 3168843 .. 3168855 -  -3.3   -2.8294   TATGGCGGAGAAGGA                GGGAT TTG AACCC                TCGCGCCGCTTACAC  44 0
HCN55_RS16615 3168706 .. 3168724 -  -8.9  -6.23317   ATAAAAACAAAAAAA             CCTTGCA GGATA TGCAAGG             CTTCTGGATGACCCG 100 31
        glgB NONE
HCN55_RS16605 NONE
        glgD NONE
        glgA NONE
HCN55_RS16590 3160568 .. 3160584 -  -9.4   -5.7946   CTGTGAACAAAAAAA              GCCGCT TATAC AGCGGC              TTTTTCACATCATCG 100 30
       cotSA NONE
        cotS NONE
HCN55_RS16565 3156097 .. 3156118 -  -7.4  -5.55698   GAGAACTTAAAAAAA           GGCATAAA TGTGAC TTTATGCC            TTGCGCTTTACAGTT 100 19
HCN55_RS16545 3151582 .. 3151598 - -12.3  -3.06183   TCCACGCTGATTGAA              CCCCCAA TTA TTGGGGG              TTCTTTTCCGTTTTC  85 16
HCN55_RS16535 NONE
        menD NONE
        menH NONE
        menB 3145706 .. 3145732 -  -8.1  -5.10933   GTATTGAAAAGAAAA        CAGCTTG-GACC GCAA AGTCTCAAGCTG         TTGGTTTACTAGATA 100 48
HCN55_RS16515 NONE
        menC 3142987 .. 3143006 - -10.7  -5.72616   ATTTACATAAAAAAA            CCGGCTG GGTCAG CAGCCGG             TCCAAACGAGAAGGG 100 111
        mntA NONE
        mntB NONE
        mntC NONE
        mntD 3138919 .. 3138945 -   -11  -4.50058   GATTTATAATTAAAA         GAAAGAGCTG CATCAGC CAGCTCTTTC         TTTTTGCATGTTGAG  95 11
HCN55_RS16470 3135812 .. 3135831 -  -4.2  -5.88565   GTCATAATAAAAAAA            GACAAACC CTCA GGCCTGCC             TTATTTCCCCATGTT  91 26
HCN55_RS16465 3135063 .. 3135083 -  -5.5  -2.57192   ATGGAATCGAAGCGA            TTAAAACAC ATG GCGCTTTAA            AAGGCGGATGGCTGA  50 117
HCN55_RS16455 3134312 .. 3134339 - -12.9  -5.26918   AGACGTCACAAAAAA        GACCTTTTTGC TTAAGC GCAAAAAGGTC         CTTTCTATTTTAGCC 100 35
HCN55_RS16450 3133769 .. 3133787 -  -2.4  -3.42699   ATTGATCCACCACAA             GAAAATCA CTC TGATTCAC             ACAATCAATGATGAT  45 30
HCN55_RS16440 3133048 .. 3133075 - -16.4  -5.38839   GATACAAAAAGAAAA        GCCGGACGTCTT TTTT AAGACATCCGGC         CGTTCTATTTTTGAA 100 42
HCN55_RS16435 3132474 .. 3132488 -  -2.7  -3.53224   TACTTTTGCCGGAAA               GTGCG ACCGA CGCTC               TGGGCTTTATTATGA  48 59
        ytkD 3131815 .. 3131832 - -12.7  -5.39721   GGAGGACATAAAAAA             CCCGGCA CATG TGCCGGG              TTTTTTATTCAATCC 100 30
HCN55_RS16410 NONE
HCN55_RS16405 3127977 .. 3128000 - -15.4  -5.49579   GTATAAAAAACAAAA          GCCAAGAGCA ATTA TGCTCTTGGC           TTGTTTTAATTGACG 100 31
        asnB 3122585 .. 3122629 -  -8.8   -5.0065   GATGGAGAAATAAAA GGATAACAACAAGGCTTTCGA CTAC TCGAAAGCCTTGTTGTC-TGT TACACAAAGATGACT 100 25
HCN55_RS16385 3121073 .. 3121101 - -12.6  -2.96216   TTCTATGAGCACACA        CAAAAAGAGCCC ACTGG GAGCTCTTTTTG        TCAGCTGATATTTCG  88 26
        ytpA NONE
        tbcS 3118383 .. 3118407 -  -7.2  -5.81412   GCCATCGAAAAAAAA          GCTCAGATCA GCAAA TGATTTGAGC          TTTTTTCTTTGAATT 100 8
HCN55_RS16355 3116390 .. 3116411 - -14.5  -5.60993   TTTTTTACAAAAAAA           CGGACCCTT TTAA AAGGGTCCG            TTTTCCTACACATCA 100 31
HCN55_RS16345 NONE
HCN55_RS16340 NONE
        ytrC NONE
HCN55_RS16330 NONE
HCN55_RS16325 NONE
        ytrF 3110803 .. 3110821 -   -16  -4.96848   TGCGCTATAGAAAAA             GCCGGCTG TCT CAGCCGGC             TCGTTCGCATTATAA 100 35
        bceR NONE
        bceS 3109026 .. 3109049 -  -9.6  -5.55001   GAACAAAAAAGAAAA          GCATGTGACA TTTT CGTCACACGC           TTATGACATGTTCAA 100 18
        bceA NONE
        bceB 3106220 .. 3106238 - -13.2   -5.4182   AACGATAAACAAAAA             GCTCCAGA ATG TCTGGAGC             TTTTTCTGTTTCACA 100 36
HCN55_RS16290 3103893 .. 3103917 - -10.2  -4.38154   AGATTGTTGACAAAA          TCCTAAAATG GTTTT CATTTTAGGA          TTTTGTCATCTTTTC  91 192
HCN55_RS16280 3101992 .. 3102020 -  -7.4  -6.02546   CCAAACTAAAAAAAA        CTCCCTCATCCC AAAAA GGGACGAGAGAC        TTTCGTTTTCCCGCG 100 327
        leuS 3099449 .. 3099468 - -10.8  -5.86965   ACTGATGAAAAAAAA            TCCCCTTT TGGC AAAGGGGA             TTTTTTCTAGGCTTA 100 38
HCN55_RS16270 3099035 .. 3099056 - -10.2   -5.4659   GAATACAAATAAAAA           CTAGGGGA CCGCTC TCCCCTAG            TTTTTTGGTTTTGTT 100 22
HCN55_RS16240 3092473 .. 3092495 - -10.7  -5.43974   AAAAGGAAACAAAAA           GACCGTTTT CACAC AAAACGGTC           TTTTTCGATTTCTTT 100 47
        bioW 3091531 .. 3091543 -  -6.3  -3.72576   CTTTTTTCTATCAAA                TCATG AGT CATGA                TCTTCCTCCCACTCT  63 13
        bioA NONE
        bioF NONE
        bioD NONE
        bioB 3087298 .. 3087318 -  -6.9  -5.61881   GTTCAAAAATAAAAA            CAATCGACA TCA TACCGATTG            CTTTTATTGATTCTT 100 41
        bioI NONE
HCN55_RS16205 3085219 .. 3085247 -    -9  -5.64321   ATAACAAAAGAAAAA        GAGCATAATCTT AGAAA ATGATTATGCTC        CGTTCTCCTCCTCGT 100 18
HCN55_RS16200 NONE
HCN55_RS16195 3082616 .. 3082640 -  -9.4  -5.12617   GAAGCATGTAAAAAA         CCCAAAACCGC TTGC GCG-TTTTGGG          TTTTTCCAATGTTAT 100 37
HCN55_RS16185 3078701 .. 3078721 -  -4.7  -3.51032   ATTTGGTAAGGATAA            CCGTCTTTG TGC CAAAAACCG            CCCTCAGACGTCCGG  57 416
        rmgQ NONE
HCN55_RS16160 NONE
HCN55_RS16155 NONE
HCN55_RS16150 3071910 .. 3071921 -  -4.4  -2.56596   TTCTCTATCAATCTA                TTCC GTTT GGAA                 CAGCGTTATGATAGA  47 51
HCN55_RS16145 3071668 .. 3071693 - -16.3   -5.5353   CATATTAACAAAAAA         GATCTTTCCGC GCCT GCGGAAAGATC          TTTTTATTTGCGATA 100 29
        murJ 3066793 .. 3066809 - -10.1  -4.77173   CCTTTATAAAAGAAA              GCCCGCA GCA TGCGAGC              CCTCAGTTTCATCAT 100 51
HCN55_RS16125 3066020 .. 3066040 - -12.6  -4.99043   TGCTTATAAATAAAA            CCCCGCAT TCGGT ATGCGGGG            TTTTTGTCATGCTTG 100 32
HCN55_RS16115 NONE
HCN55_RS16110 3063526 .. 3063545 - -12.2  -5.24989   GGATAGACCAAAAAA            CCCAAACG TCGC CGTTTGGG             TTTTTTATGTAAACA 100 30
        pepV 3060696 .. 3060721 - -13.3  -5.47821   ATTTATTTAAAAAAA         GGACTGGCTTC AGCA GAAGCCGGTCC          TTTTATTTTGCAAGC 100 28
        thpR NONE
HCN55_RS16085 NONE
HCN55_RS16080 NONE
        pulA 3054883 .. 3054922 -  -2.3  -5.98675   TATAAAAATAAAAAA  GACAGCTATTGA-GAG TCTCATATG CTAATCAATAGCCGTC  CTTTAAATTTTAGCG  87 58
HCN55_RS16070 3053603 .. 3053627 -  -3.5    -5.626   GAGCGCATAAAAAAA          GAGGGTCCC GTCTGCT GGAACACTC          CTTTCCCATGTATAA  84 376
        trmB 3052828 .. 3052847 -  -8.6  -5.93809   GGCCCATAAAAAAAA            CAGACTCC TGTC AGAGTCTG             TCTTTACGTTCTCCA 100 29
HCN55_RS16055 3051922 .. 3051933 -    -3  -3.61922   AACATGCAGGGTAAA                CATA AAAA TATG                 CTATCGCTTCATTCG  48 26
HCN55_RS16050 3050118 .. 3050146 -  -9.6  -5.32944   CGGACAAGCAAAAAA       TAGAAGCCGCTGC CTAT GCAGCGGCT-CTT        TTTTATTATATCGCG 100 31
HCN55_RS16040 3048503 .. 3048538 -  -4.7  -5.68489   CAGAATAAGAAAAAA    GCTTGTCGATCCGGGC TTACT GCTCGT-TCAACAAGC    TTTTATGAAACCTAC  88 37
HCN55_RS16030 NONE
HCN55_RS16025 NONE
HCN55_RS16020 3046655 .. 3046669 -  -2.2  -2.59323   AAAAGCGTTCATAAG               TAAAAA TCC TTTCTA               ATCCTTTTTCGGACG  40 23
HCN55_RS16015 3045982 .. 3046005 - -13.2  -4.59944   ATCAGCAGAAACAAA          GCCGCTAAAC AAGG GCTTAGCGGC           TTTTCACATGATTCG 100 66
        sftA 3042857 .. 3042871 -  -3.4  -4.07568   CGCGGCGGCTGAAAA               GCCTCC CTT AGCGGC               GTATTTTATATGTTT  57 182
HCN55_RS16005 3041452 .. 3041479 - -14.4  -4.08706   TTCCCATCAGATAAA        TAAAAAGCAGTG AGAT CACTGCTTTTTA         TTATGCCATGACGTT 100 26
HCN55_RS16000 NONE
HCN55_RS15995 NONE
        ytxJ 3040032 .. 3040053 -  -9.5  -5.93809   TTTTTACAAAAAAAA           GCG-CCAGAT GAT ATCTGGACGC           TTTTTTCTATGACAA 100 32
HCN55_RS15985 3038717 .. 3038732 - -11.8  -5.75599   GAAAGCATAAAAAAA              GGCCGC AGGC GCGGCC               TTTTGGATTGTTCAA 100 41
        ccpA 3037426 .. 3037455 -  -5.8  -5.14563   CTCCCCATGAAAAAA       GCAAGAATTCACC ATAAA GGTGAAG-CTTGC       TCTTTGTTTTTCTTA  83 38
        motP NONE
        motB 3035863 .. 3035882 -  -6.4  -5.46129   GAACAAAGTAAAAAA            CGACCTTT ACGA AGAGGTCG             TTTTTGATTTTTTAA  93 12
        acsA 3031209 .. 3031234 - -15.5  -5.85244   AATTAAAATAAAAAA         CGCCCCTTCGT TTAC ACGAAGGGACG          ATTGATTATCGCGGT 100 307
HCN55_RS15945 3029872 .. 3029899 - -14.3  -5.27335   TGCGGTAAACAAAAA        GATCCTTTGCC TTCAGT GGCAAAGGATC         TTTTTCTTATTTATA 100 32
HCN55_RS15935 NONE
HCN55_RS15930 3026969 .. 3026993 - -10.1  -4.70583   CGCAGTAATATAAAA          GCCCAAAAC TGATATC GTTTTGGGC          TTTTTTTATTTTATT  91 31
        refZ 3025333 .. 3025344 -  -5.8  -3.37487   GCATACCTTCAAAGA                GCTG ATTT CAGC                 CTGCGGAAGCATTGA  56 401
        ezrA 3022948 .. 3022969 -   -13  -3.52192   GTTAATGTCACAGAA           CGCCTGCG TTATTG CGCAGGCG            TTTTGTAATAAAAAA  95 88
HCN55_RS15900 NONE
        thiI 3018985 .. 3018998 -  -5.3  -3.54475   CTTGTGAGTATAGAA               TGTGT CAAA ACACA                TGGCTTCATTCAGAA  58 78
HCN55_RS15890 3018703 .. 3018722 - -13.6  -5.25735   GTAAAAAATGAAAAA            GAGTGGGG ATAC CCCCACTC             CTAAGCCATTATGTG 100 51
HCN55_RS15885 NONE
HCN55_RS15880 3015344 .. 3015373 - -18.1  -4.52589   CTTTTTTATAGAAAA       TAAAAGGACAGGC TGCT GCCTGTCCTTTTA        TGATTTCTCATATAC 100 23
        sppA NONE
HCN55_RS15865 3012807 .. 3012831 -  -9.4  -5.43866   CAATTCCTAAAAAAA         TAAACCCGGAC GGAA GTCCGGG-TTA          TCGGTTATTTGCGGT 100 30
HCN55_RS15860 NONE
        ytfJ 3011581 .. 3011605 -   -13  -5.78622   TTATGCCAAAAAAAA          GTTAACTGCG GCCAG CGCAGTTAAC          CTTTTTTTAATAATT 100 32
         tpx 3010966 .. 3010986 -    -9  -5.14563   CTTGCCATGAAAAAA           GCTCC-GGC GGCA GCCTGGAGC            TTTTTTCCCTGCTTA 100 38
HCN55_RS15845 NONE
HCN55_RS15840 3009672 .. 3009684 -  -2.7  -3.25073   CGGTGAATATCAACA                TCTTC TCC GAAAA                ATATCTGACTTTTCC  45 115
HCN55_RS15835 3008383 .. 3008402 - -10.8   -5.5112   TGCATCAACAAAAAA            GCACATTC AAGA GAATGTGC             TTTCATGCGATTTAT 100 37
HCN55_RS15830 3007775 .. 3007797 - -11.4  -5.93809   CTTTTATAAAAAAAA           CTTCACCTAA ATT TCAGGTGAAG           TTTCATAGTATTTAT 100 45
HCN55_RS15825 NONE
        argH 3004840 .. 3004857 -  -7.7  -5.71712   TGGCATACAAAAAAA             GCTGCCT GTAC AGACAGC              TTATTCTGCAGGAGA 100 222
HCN55_RS15815 NONE
HCN55_RS15810 3003183 .. 3003208 - -14.1  -5.75538   CTGAAAAAATAAAAA         CCACCTCCTGA TTCA TCAGGAGATGG          TTTCACGGTTTAAAG 100 35
        snaA 3001555 .. 3001568 -  -3.7  -2.62184   GGCTGCCTCACATCA               TGCCC AGCT GGGCG                CACCTAAAAGCGTTG  45 9
        tcyJ NONE
        tcyK NONE
        tcyL NONE
        tcyM NONE
        tcyN NONE
HCN55_RS15770 NONE
HCN55_RS15765 NONE
HCN55_RS15760 NONE
        ribR NONE
        sndA 2992994 .. 2993006 -    -2  -2.64225   GCAAAAACGATTAAT                TTCT TCATC AGAA                CACCCCATCTATATC  40 39
HCN55_RS15745 2992008 .. 2992024 -    -8  -5.79595   CTGGAAAATAAAAAA              GAAGCC CGACC GGCTTC              TTACAGCGTTGATTT 100 100
HCN55_RS15740 2990360 .. 2990371 -  -5.8  -3.57263   AGGCGTACGGGCAAA                GCCA TCTT TGGC                 AAAAGAAATATGTTC  59 258
HCN55_RS15730 2989194 .. 2989216 -  -8.5  -3.41309   ACAGATGAACACTAA          GAG-AGAGGG TCTC CCCTCTACTC           GTGTTCTTTACATAA  70 20
        dnaE NONE
        maeB 2983089 .. 2983138 - -14.6  -3.76749   AAAAATAATGTTAAA CCCGGCTGAAATTTTTTTAAGG CTAACC CCCTAAAAAAATTTCAGCCGTC AGTTTAACTTGAGAA 100 91
        accD NONE
        accA 2981006 .. 2981033 - -12.2  -5.27923   GAATGTCACAAAAAA        TAAACGTG-AGCC AAA GGCTTCACGTTTA        TTTAGTTTACCCCGA 100 27
        pfkA NONE
         pyk 2978060 .. 2978077 - -11.3  -4.85822   ATGATAAAGAGAAAA             GGAAGGG ATTC CCCTTCC              ATTTTCACCTGTAAT 100 40
        fxsA 2977581 .. 2977616 - -10.5   -4.7254   ACCGTTCAGCAAAAA    TAAAACGGCAGCCGT TTTTTC ATGGCTGCCGTTTTT     TATTTGATGATGATC 100 25
HCN55_RS15670 2975885 .. 2975900 -  -7.5  -5.93809   TTTGCATAAAAAAAA              GCGGC TTTAAG GCCGC               TTTTTTTTATGAAGT 100 32
        citZ 2974330 .. 2974361 -  -5.5  -4.45083   TTCATATTTAGAAAA      CATTTTATTTTTCT TATAT AGA-AAATAAAATG      ATTTTTCCTAACATT  70 119
         icd NONE
         mdh 2972000 .. 2972029 -    -8  -4.81551   CATTTATAGTAAAAA       GAGAAAGGCT GTATTAAGCA AGCCTTTCTC        TCTTTTTATTAGGAT  88 34
        phoP NONE
        phoR 2969252 .. 2969278 -  -5.9  -5.48787   AGAAGACACAAAAAA        GGACGGGAAC ACAAATAG GTTCCCG-CC         GTCAAAATTGGCTCC  91 119
        polA NONE
        mutM 2965622 .. 2965636 -  -4.2  -2.58249   GACAGCTTGGACAAT               GAAGCA TTA TGCTAC               TTTTTTGTCTGGCAC  47 22
        ytaF NONE
HCN55_RS15625 2964196 .. 2964216 - -14.1    -5.055   TTAATGGCCAAAAAA            CACCGTTCA ATA TGAACGGTG            TTTTTTGTATTATGC 100 35
HCN55_RS15610 2961530 .. 2961554 - -14.3  -4.99435   CGTAAGAACCAAAAA          GCAGCCAGCGC TCC GCACTGACTGC          CCTCATGCTTTATGA 100 35
HCN55_RS15605 NONE
HCN55_RS15600 2959651 .. 2959696 - -13.5  -5.35224   TTTATAAAAATAAAA GGAGCATAAGCTAAAAAGCGCA TAA TG-GCTTTCTAGCTTCAGCTCC CTTTGTGTTCGCAAT 100 46
        nrdR 2958959 .. 2958982 -  -6.8  -4.50976   TTGCACATGAGAAAA          GAGCTA-GAAG AAT CCTCTTAGCTC          TTTTAACGCTCTTTC  76 28
        dnaB NONE
        dnaI NONE
HCN55_RS15580 NONE
        ytxC 2954523 .. 2954548 - -11.1  -4.96848   TTTTGCATATAAAAA         CCCCGCCCCCT ATGA AAGGGACGAGG          TTGAATAAACGGAAT 100 367
        thrS 2952526 .. 2952551 -   -12  -6.04953   AGAGAAATAAAAAAA         GCATGATCTC TTCAAT GAGATCATGC          TTTTTTATTTTATTT 100 35
        lytS NONE
        lytT 2949079 .. 2949102 -  -5.3  -4.81249   GCTGAAATGCAAAAA          GCCGC-CCAT CAAAT ATGGAGCAGC          TTTTTCAATTCCTTC  75 10
        lrgA NONE
        lrgB 2947775 .. 2947795 - -12.6  -6.14618   CATAAAATAAAAAAA            GCCAAGGC ATTCA GCCTTGGC            TTATCCTCCGATCAG 100 26
        infC NONE
        rpmI NONE
        rplT 2945498 .. 2945518 - -12.6  -5.03994   CTTTATATAGAAAAA            GCCGCTCT GCTGG AGAGCGGC            TCTATATGATTACTT 100 35
HCN55_RS15520 2945172 .. 2945198 - -13.8   -5.4477   AAACTCGCAAAAAAA         GCAGAAGAGCGT TAA ACGCTTTTCTGC         TTTTTATAAATCAAA 100 29
HCN55_RS15510 2943489 .. 2943516 -  -9.2  -5.76633   GTACAGACAAAAAAA        TAGAATCCACCT CAAT AGGCGGATTCTT         CCGTATCTTTATTGG 100 34
        abnA 2942330 .. 2942348 -  -8.8  -5.40072   TTTCTTTTAAAAAAA             GCCGGG GGCAGAG CCCGGC             TTTTTAATTCAATAG 100 34
        araA NONE
        araB NONE
        araD NONE
        araL NONE
HCN55_RS15480 2936321 .. 2936334 -  -3.1  -2.91264   CGGGCTATTCATATA               GACCA TGGT TGATC                AGCGTTTTGTTTTCA  44 1
HCN55_RS15475 NONE
HCN55_RS15470 NONE
        araQ NONE
HCN55_RS15460 2931604 .. 2931623 - -13.6  -3.82946   GCAGTTGAAAGACAA            GCCGGAGA GAAA TCTCCGGC             TTTGCTATTCTTATG 100 36
HCN55_RS15455 NONE
HCN55_RS15450 NONE
HCN55_RS15445 2929237 .. 2929261 -   -13  -4.02456   AAACATCATGAGAAA          GCCCAAAACA GACAT TGTTTTGGGC          TTTTGTGCGTTATTC  95 35
HCN55_RS15420 2923834 .. 2923857 - -13.2  -6.34616   GGAAAATAAAAAAAA          CCCGTCCCTT GTAC AAGGGACGAG           TTGTGGCCGCGGTAC 100 299
        pheS NONE
HCN55_RS15405 2920283 .. 2920304 - -13.1  -5.36441   CGTTCATAGAAAAAA           GCTTGCAGA TTTC TCTGCAAGC            TTTTTTATCAGCCTC 100 33
        zapA NONE
HCN55_RS15390 2918380 .. 2918398 -  -5.3  -5.45726   CATACTTGAAAAAAA             CTTCTCC GGACA AGAGAAG             TTTTTTTATGCCCCG  88 31
        polX NONE
HCN55_RS15380 NONE
HCN55_RS15375 2913697 .. 2913724 - -10.1  -5.78622   GGACGGCAAAAAAAA        GAAAAAGAAAG GTAAAT CTTTCTTTTTC         TCATAATATGAACAG 100 122
        lcfA 2911871 .. 2911888 -  -7.1  -4.03234   TCCTTCCTATAGAAA             TGAATGA CTAT TCATTCA              TAATTTCATGATAAG  73 87
        fadR NONE
HCN55_RS15360 NONE
        etfB NONE
        etfA 2908641 .. 2908661 - -15.5  -5.34055   ATAAATATGAAAAAA            CCCGGACTT TTA AAGTCCGGG            ATTTCCTTTATGAGT 100 33
HCN55_RS15345 2906930 .. 2906956 - -12.3   -4.7416   TTAAAACCTGAAAAA         GAGCGCCGG CATGAAGCT CCGGCGCTC         TTGCGCGATTAAGAA 100 34
        trxA 2906283 .. 2906304 -    -8   -5.7946   TGGCGAATAAAAAAA           GCGATCCC TCAATC GGAATCGC            TCTGGCATGTAAGCA 100 49
        uvrC 2904120 .. 2904144 -   -13  -5.88565   TCCACAATAAAAAAA          GCAATGAGAG GAATA CTCTCATTGC          TTATCAATTAATCAT 100 301
HCN55_RS15330 2902788 .. 2902810 -  -9.9  -4.87291   CAGTGTAATCAAAAA          GGCGGTGACT GCAT AGTC-CCGCC           TTTTTGATTGTCATT 100 39
        sdhC 2901443 .. 2901453 -  -3.2  -3.25202   TACTCTTAAACAAAT                 GCAA AAA TCGC                 TTTTAAGCCTACGTA  47 5
        sdhA NONE
        sdhB 2898845 .. 2898864 -   -10  -5.41143   TATTGTTTAAAAAAA            CCTCTCCC ATGC GGAAGAGG             TTTTTTCTTCTTATA 100 36
HCN55_RS15305 2898361 .. 2898375 -  -2.9  -3.31263   AGGTGACGTTTACAA               GATAA TTAGT TTATC               GTGTATGAAGAAGCG  46 21
        gerE 2897863 .. 2897875 -  -4.1  -4.63218   CTTTTTTGAAGAAAA                TGCAA GAC TCGCA                GGAGAGAAATAGAGG  66 181
HCN55_RS15295 NONE
        racE 2896495 .. 2896515 - -13.3   -5.9362   CAAAACAGAAAAAAA            CCCGCAACA TAC CGTTGCGGG            GAAAACTATCTTTTA 100 31
        gerM 2895250 .. 2895280 -    -7   -4.2528   CCGGAATTGAATAAA      GAAAGAGG-CAGC CGGAAC GCTAACCTCTTTC       TTCCTAGTATATCAA  75 51
HCN55_RS15280 NONE
HCN55_RS15275 NONE
HCN55_RS15270 2893284 .. 2893323 -  -3.6  -2.57211   ACGGTTTTTTAGAAT  TTTTTTCATGAGGAAGAA AATT TTCTTCCTCATGACATTT   TCATAGTGTGACTCG  45 26
HCN55_RS15265 2893081 .. 2893105 -   -13  -5.56673   ACCGACAACAAAAAA          CCTCAAATCC TAAAT GGATTTGAGG          TTTTTCTTTTGGTAC 100 39
        ilvB NONE
        ilvN NONE
        ilvC NONE
HCN55_RS15230 NONE
        leuB 2884305 .. 2884325 -  -8.3   -3.1355   TCTACCTAGAGCTAA            GACCGCTTA ACG TAAGCTGTC            ACACATTAGAAATTG  69 24
        leuC NONE
        leuD 2882217 .. 2882239 -  -7.6  -5.48825   CACCAGGCAAAAAAA           GCCGCCGG ACAAATA CCGGCCGC           TTTTTCAGGCTTGAA 100 30
HCN55_RS15210 2881080 .. 2881090 -  -2.6  -2.89079   AATACAACCACTATA                 TTAT AAC ATAA                 CACATAGCGCTTTCA  42 56
HCN55_RS15205 2879565 .. 2879589 - -12.9  -4.43859   CATAATTGTACAAAA          CAAGGCACGAA TGA TTCGCGCCCTG          TTTTATTAGTACTAT 100 55
        clpX 2878046 .. 2878071 - -17.7  -5.47218   TTGCATGCAAAAAAA         CCTCCTGAGTG TTAC CACTCAGGAGG          TTTGTGCTTATCTTT 100 39
        lonB 2876255 .. 2876273 -  -7.5  -5.52384   CCTTCATGAAAAAAA             CCCTATT ATCAA AATAGGG             TTTAAACGGATTCTT 100 27
         lon NONE
HCN55_RS15185 2873171 .. 2873192 - -14.5  -5.03227   ATACGATAAATAAAA           CCGGTAGAG GATC CTCTACCGG            TTTATCATTTTTTTG 100 19
HCN55_RS15175 NONE
        ccsA NONE
        hemC NONE
HCN55_RS15160 NONE
        hemB NONE
        hemL 2866149 .. 2866174 - -10.5  -5.20216   GAGAGCACGAAAAAA         CCGGCA-CAAGG AGT CCTTGATACCGG         TTTTCACTCTTATCT 100 35
      spoVID NONE
        cotN 2863255 .. 2863283 -  -8.8  -4.63044   ATGGATATAAACAAA        CAAGTCCGCGCC ATTAA GACGTGGACTCG        TTTTCAGCCTGAAAT  90 10
        valS 2859935 .. 2859956 - -14.5   -3.7511   TCTTTTATAAGACAA           GGCGGTTTC TCTA GAAACCGCC            CCGGCTTTTCATTAA 100 37
HCN55_RS15125 2858576 .. 2858602 - -12.4  -5.60864   TACACATGAAAAAAA         CGGCAGAATC TTTTTTT GATTCTGCCG         GAGCCGGATGCTTTT 100 39
HCN55_RS15120 2857677 .. 2857701 -  -4.3  -5.96894   AGGCAAAGAAAAAAA          GAACAAGAC TTTTGTC GCCTTGTCC          AAAAAACGTTCGTCA  95 54
      spoIIB NONE
         maf NONE
        radC 2855084 .. 2855097 -  -2.3  -4.98531   TTCTTAAAGCAAAAA               TACCC TAAA GGGAA                AAACTCATAAACTCT  66 72
        mreB NONE
        mreC 2853120 .. 2853151 -  -4.4   -4.0251   AGCATCATAACGAAA      GGGAGAAGGAAACGT TTC ACGAT-CCTTCCTCC      TCTGTATCGACAGTC  61 10
        mreD 2852610 .. 2852623 -  -2.5  -4.34482   TTCGTCAAAAAAAGA               TAAAA TCCT TTTTA                CTCATCTCTCAATTC  57 23
        minC NONE
        minD 2851031 .. 2851056 -  -8.3   -6.4275   CAAAAACAAAAAAAA         CCTGACACAGC ATAT GCTTTGTCAGA          TTCTTCTCTTTGATT 100 49
     spoIVFA NONE
     spoIVFB NONE
        rplU NONE
HCN55_RS15060 NONE
        rpmA 2848150 .. 2848171 -  -8.7  -5.79526   ATATTGCAAAAAAAA           CTCCAGTCA TCAT CGACCGGAG            TTTTTTGAATCATTA 100 38
       spo0B NONE
        obgE 2845926 .. 2845947 - -14.5  -3.63744   CCCCCCTTTAAAATA           GAGAGCCTG GCAC CAGGCTCTC            TTTTCAGCCAACATT 100 43
        thrR NONE
        pheA 2844568 .. 2844581 -  -5.2  -5.66989   TAAAGACTAAAAAAA               GCCC TCTAGT GGGC                TTTTTTTATAATTGG  88 31
        nadB NONE
        nadC NONE
        nadA 2839251 .. 2839272 -  -2.4  -3.75653   AAGGAAGGGAAAATA           TTTCTGATC TACGT GATC-GAAA           GCATTCGATTCAGGG  49 12
        safA 2837953 .. 2837972 - -10.8  -6.09196   TTGAAAACAAAAAAA            GGAACGAT TTAC ATCGTTCC             GAACGATCACTCATT 100 32
        sgpA 2837200 .. 2837226 - -11.6  -5.30616   TGATGCAAAGAAAAA         GGCTGCCGAA TATCACT TCCGGCAGCC         CTTCCTTCCTAGCGG 100 34
HCN55_RS14990 2836381 .. 2836405 -  -8.5  -4.43213   CTGAACATACTAAAA          CCGGCCCGA TATGACC TCGTGCCGG          TTTTTTATGAACGAT  86 30
HCN55_RS14970 2834070 .. 2834091 - -17.3  -4.98531   TTCTTAAATCAAAAA           GGCAGCCGC ACAA GCGGCTGCC            TTTATCATGTATTTT 100 41
        iolG NONE
HCN55_RS14955 2830771 .. 2830785 -  -2.1  -3.45324   TAGTTTGACCAAAGA               GGCTA CTGCT TAACC               GTTTTATCAAAATTT  45 13
        bofC 2830182 .. 2830197 -  -7.6  -5.86061   TTTCACGAAAAAAAA              GACATG AATA CATGTC               TTCAATCAGCGGACG 100 41
        ruvA 2829446 .. 2829465 -  -2.8  -2.63596   CTTCACTTGAGACGA            GCCGTTCA TCCA TGAACATC             ACCTTACTTTAATAG  41 29
        ruvB NONE
HCN55_RS14935 NONE
        queA NONE
         tgt NONE
        yajC 2825676 .. 2825697 -   -13  -5.36441   CTTCCACATAAAAAA           GAGCGGGC TCACTT GCCCGCTC            TTTTTTGTTTGCTAT 100 56
HCN55_RS14910 2824425 .. 2824443 -  -4.5  -3.34043   TTGATCATCCGATAA             TGGTCAC GTGCG GTGCCCA             TCTTTTTCATCAATA  53 10
        comN 2822453 .. 2822467 -  -6.4  -2.60075   CCTGTGCGAATCAAC               CTGCTA TCT CAGCAG               TTCTTCCAATGCTTC  57 14
       secDF 2820171 .. 2820196 - -15.5  -5.12707   TGAAACTTCAAAAAA         CAGGCTGCCCT GCAG AGGACAGCCTG          ATATTTTTTATTGCG 100 33
HCN55_RS14890 2819535 .. 2819555 -    -4  -2.60615   ACTGGTTTTAAACAT            GGCTTAAC ACTAG GTTAAGCT            CCCTTTGCTGTTAAT  45 19
HCN55_RS14885 2819091 .. 2819129 - -10.4  -2.76227   GCTAACATAAATTCA  CCCCTCAACC-ACCCTA TTATAC TAGAGCAGGCTGAGGGG   TTTCAAATAATATTC  77 46
        recJ NONE
HCN55_RS14875 2816165 .. 2816183 -  -3.8  -5.31545   AACAATAGGAAAAAA             GCACCC TGACATG GAGTGC             TTTTTCGTTATGCGG  78 47
        relA NONE
         dtd 2813346 .. 2813390 -   -14  -2.77876   GGATTAGAGAAATAC TTC-CAATAAAAAAAGCTGCC TTTT GGCAGCTTTTTTTATTTTGAA TCCATAATGAGCGTG 100 16
        yrzK 2811180 .. 2811216 - -18.2  -5.79588   TGAAAATGAAAAAAA    CTCCCGCCCCTACTAT ACATG ATAGTAGGGACGAGAG    TTATACCCGTGGTGC 100 304
HCN55_RS14850 NONE
        aspS 2808015 .. 2808036 -  -5.3  -2.99834   AAATCATATCACAGA           CGATT-TTGA TTT TCAAGAATCG           AACTGCAAATTCAGT  53 36
        ssrS 2807754 .. 2807772 -  -8.8   -3.2511   TTTCATCTATAAAAT             GGCTGATC CAT GAGCAGCC             GTTTTTTCTGCGCAC  71 47
HCN55_RS14835 2806903 .. 2806949 - -16.2  -5.18643   TTAATGAAAAGAAAA TAAAACAAAAAAACAGCCTTGA TCA TCAAGGCTGTTTTTATGCATTA TTTATCCTTCACACG 100 23
        cymR NONE
HCN55_RS14820 NONE
        mnmA 2802687 .. 2802705 -  -6.7  -5.14563   CCTTTCATTAAAAAA             CCCCAAC TCAGT GTTGAGG             TTTTTCATCTTTTAT  86 37
HCN55_RS14810 NONE
HCN55_RS14805 2799568 .. 2799585 -  -9.1  -6.02546   GCAAATGAAAAAAAA             CTCCCGC TTGC ACGGGAG              CATTTTATTGCTGTT 100 30
HCN55_RS14800 NONE
HCN55_RS14795 NONE
HCN55_RS14790 2798622 .. 2798643 - -11.7  -4.74013   GGCAAACATAGAAAA           GGATACTCT TTGG AGAGTATCC            TTTTTGCATTAAAAC 100 34
HCN55_RS14765 2794166 .. 2794208 - -12.9  -5.22312   AGTGACAGCAAAAAA GCCCTC-CCCCTATGCAAAC CAAC GTTTACACAGGGACGAGAGC TGTCTCGCGGTACCA 100 262
        alaS 2791487 .. 2791497 -  -3.2   -3.3217   GGCGAATTATAAAAC                 GGAT TTC ACCC                 AATCTTCTACAGAAG  48 6
HCN55_RS14755 NONE
        ruvX NONE
HCN55_RS14745 2790363 .. 2790384 -   -13  -5.43621   ATAAAGCAGAAAAAA           GCCGGAGC AGTATA GCTCCGGC            TTTGGTTTGGCGCGA 100 45
        mltG 2789170 .. 2789188 - -10.3  -4.75309   GGAAAGCGAACAAAA             GGAGAGC TTTTT GCTCTCC             TTTTATTTCTCATTT 100 28
HCN55_RS14735 NONE
HCN55_RS14730 NONE
HCN55_RS14725 NONE
         udk 2785450 .. 2785473 -  -9.7  -3.83324   TTATAAACAGGGAAA          GAAGGGAAT TCGCAC ATTCCCTTC           CTGCCTATACATAAT  85 74
        greA 2784752 .. 2784778 - -15.2  -5.61596   ATCTTCATAAAAAAA         CACCTCACCCAC ATT GTGGACGAGGTG         TTTCGCTGCTAAACA 100 45
HCN55_RS14710 NONE
HCN55_RS14705 2782190 .. 2782222 - -19.3  -4.19506   AGCTGAAGCCTAAAA      CAAAAGCAGCCGGTT TTA ACCCGGCTGCTTTTG      TTTATTTTAGCTTTT 100 27
HCN55_RS14695 NONE
        mtnN 2780411 .. 2780431 -  -7.6  -4.96848   GTTTTTAGAGAAAAA           CGGAGGAGA ACGT TCTCC-CCG            TTTTAATGAATTCGT  89 28
HCN55_RS14685 NONE
HCN55_RS14680 2778265 .. 2778279 -  -2.8  -3.29541   ACGACTATTATAATA               TAATCC GGC GGCTTA               CAGAGAAAGTAATTC  46 51
HCN55_RS14675 2777965 .. 2777986 - -10.2  -5.21506   ACAATAACAGAAAAA           CAGCCATC TCTGAT GATGGCTG            TTTTTTTATTCGTCG 100 31
HCN55_RS14660 2773627 .. 2773673 - -11.1  -5.52096   AAAGGCAATAAAAAA GGCAGCACTCAAATAACCTGTGT CAA AC-CAGGCG-TTTGAATGCTGCC TAACTTGTATGCATA 100 181
HCN55_RS14655 2772454 .. 2772494 -  -9.8  -5.27335   GCGGGCAAATAAAAA CCGCAGACAAAAGAAGACA CCAA TGCCT-CTACTGCCTGCGG  GGAGTTGCGTATGTC 100 297
HCN55_RS14650 2772108 .. 2772119 -  -2.2  -2.80816   CGTTGATTTACTATA                TGCA GGCG CGCA                 TTTTCTTGACAGCTA  41 133
HCN55_RS14645 2771882 .. 2771904 - -13.6  -5.75342   TTTTCCGAAAAAAAA           GCAGAAAACA TAA TGTTTTCTGC           CCTCTTTCTAATGCC 100 33
HCN55_RS14640 2771121 .. 2771173 -  -2.3  -6.04324   GCAAAAAATAAAAAA TTAAGAAAATATACCCAA-ATCCT AATACG AGGATCTTGGATATATTTCCCGAG AAATTTTTTATTTAA  87 33
        fatR NONE
HCN55_RS14630 2767162 .. 2767184 - -16.4  -3.55866   TCATATGCAAAGCAA           TCCCGCCAAT CAG ATTGGCGGGA           TTTTATATTTTACAT 100 35
HCN55_RS14600 2761257 .. 2761281 - -10.1  -6.23545   GTGAAATAAAAAAAA          GACAAGGGA TACTCAC TCCCTTGTC          TTTTTATATGTGTCA 100 90
        levR 2756272 .. 2756312 -   -13  -5.79588   TTAAAACGAAAAAAA TAAACCTGTATTAAAATGG TGTT CCATTT-AATACAGGTTCA  TATGAAAAAACTGTT 100 42
HCN55_RS14580 NONE
        levE NONE
        levF NONE
        levG 2753427 .. 2753437 -  -3.2  -3.40622   CACTTTCAAAAGAGA                 CTGC TGC GCAA                 GCTGGTCCGTTTCTG  48 125
        sacC 2751312 .. 2751336 - -11.5  -4.20953   TTAAAATAACAAGAA          GGCACAGAC TGTTCGG GTCTGTGCC          TTTTTTAAAATTAAG  91 36
        adhR 2748630 .. 2748663 -  -9.7  -4.42386   TCTTGATGGAGAAAA     CAGGCCAGAAACAAA ATCC TTCGTTTTTGACCTG      CCCTCTTCACACGCA  91 48
HCN55_RS14510 2745348 .. 2745361 -  -3.8   -3.0636   GGACACCATACAAAT               CAGC GTAAAT GCTG                CAAGTTCAGTGTCCG  47 135
HCN55_RS14505 2745198 .. 2745210 -  -2.7  -2.71731   TCCAGTCGGTAATCA                CGATT GAC AATCA                GGAAAAAGGACATGG  41 42
HCN55_RS14500 NONE
HCN55_RS14495 2744109 .. 2744135 - -12.4   -4.7373   TCATCGCAGCAAAAA         CCATACCAACTA TTG TTGTTGGTATGG         TTCGTCCTAGATAGG 100 77
HCN55_RS14480 2741224 .. 2741244 -  -9.1  -5.28942   TACTGCAAATAAAAA            GATACCAAC ATC ATTGGTATC            TTTTAGATTGAGTTC 100 69
HCN55_RS14470 2738826 .. 2738838 -  -2.7   -3.1505   ATGACTTTTGATTAA                CATAT CTT ATACG                GTGTAATAAGTTAAA  45 85
HCN55_RS14465 2737258 .. 2737282 -    -8  -4.30177   TATCATATTAAGAAA         GACAAGAG-CA TGTT TGTCTCTTGTC          TTTTCCACATCGTGC  78 210
        sigZ 2735524 .. 2735554 - -10.6  -3.60098   ATGGCCTATTTTAAA       GGAATAACTGACTA TGT TCATCAGTTATTCC       TTTAAAATACGAAAG  82 19
HCN55_RS14450 2734657 .. 2734667 -    -4  -2.83345   TTCATAGAGTAATCA                 TCAT TTA ATGA                 GCCATCATCTCATGG  46 19
HCN55_RS14445 2734386 .. 2734415 - -14.5   -5.4492   TAGACATATAAAAAA       CCGCAAAGCTTTCT TGA AGA-AGCTTTGCGG       TTTTTGGGTCTCTTC 100 47
        aadK 2728890 .. 2728903 -  -5.3  -3.60234   GTAGACATTCTTAAA               CGTAA CGAT TTACG                CATCTTTTTACAAAC  58 108
HCN55_RS14415 2728180 .. 2728216 -  -5.3   -5.9003   AAACGAACAAAAAAA    GAACATGTTTTGAAAAA AGA TTGATCAAAACATCTTC    TTATATGTTGTCATA  91 66
HCN55_RS14405 2727046 .. 2727062 -  -3.7  -5.68489   GAGAATAATAAAAAA              CACTC TAATAAC GAGTG              CTGAAATGAAAAACT  85 39
HCN55_RS14400 2726229 .. 2726252 - -14.6  -3.98173   GGAAATCGAATTAAA          GCGCCCTTCC TATT GGAAAGGCGC           CTGCCGTTTTACTGT 100 57
HCN55_RS14395 2725711 .. 2725726 -    -4  -4.12188   GGACGATTTGTAAAA              TGATCC ATTG AGATCA               GTATTCATGATAAGG  58 335
HCN55_RS14390 2724229 .. 2724253 -  -4.3  -5.88476   AAAACAAATAAAAAA          CACCGATAG GATGAAA CTATTGGTG          TTTGCAAGACATCTT  91 183
HCN55_RS14385 2723584 .. 2723603 -    -8  -4.03769   ATACAATTTAAATAA            TAACGAAT TTTT ATTCGTTA             ATCAAATATTATTTA  76 286
        azlB NONE
        azlC NONE
        azlD 2721924 .. 2721936 -  -6.3  -2.58887   GTTAAATAAAAGCAT                GATCA TTT TGATC                GTTTCCGATATCGGT  54 40
        brnQ NONE
HCN55_RS14360 2720130 .. 2720152 -  -6.3  -5.24989   GTATAGAGCAAAAAA           GCAAACTTC GGTAT GTAGTTTGC           TTTTTCTTCGTGATT  89 62
HCN55_RS14350 2718337 .. 2718363 - -16.7  -5.59879   TATAAACATAAAAAA         GCGGAGCAAAC ACATG GTTTGCTCCGC         TACCCTAGTTTCTCT 100 80
        czcD 2717133 .. 2717144 -  -4.4  -2.79492   CCGCCAATTTCAAAT                TGTC AGTA GACA                 GAATCTGCAAAATCC  48 77
HCN55_RS14340 2716034 .. 2716064 -  -4.1  -5.09895   TATTCACGCAAAAAA       TAGAGCAGTAA ACATGTGAG TTACTGCTCTG       CTTCGTTTATTCACC  74 32
HCN55_RS14330 2713965 .. 2713979 -  -2.2  -2.65046   GAAAAACAATAAACC               TTCAAA CAT TTTAAA               TCCCCCACTGTCTAA  40 37
HCN55_RS14325 2713782 .. 2713803 -  -8.7  -5.56372   AAAGCAAAATAAAAA           CACACCTGA ATTT TCTGGTGTG            TTTCAATAATACCCA 100 52
HCN55_RS14320 2712192 .. 2712217 - -11.3  -5.02074   TCATTGTTTAAAAAA         GCCTG-GATGAA AAT TTCATCTCAGGC         TTTAAGCATCTTATT 100 71
        bltR 2709314 .. 2709328 -  -2.9  -4.25957   ACACAACAGAAACAA               TTTTC CATAT GAAAA               TCTCGTAATTTTACA  57 36
HCN55_RS14300 NONE
HCN55_RS14295 2708076 .. 2708097 - -11.7  -3.96681   CGAATAAAGCAATAA           GCCGATTTA ATTT TAAATCGGC            TTTATTTATCAATTA  91 165
HCN55_RS14290 2707227 .. 2707249 -  -9.2  -5.00642   TAACGCATATAAAAA           TTCGTCAACC TTA GGTTGATGAA           TTTTTATCGGCTCTT 100 29
HCN55_RS14285 NONE
HCN55_RS14275 2705811 .. 2705836 -  -4.7  -3.35934   TTACAGACTTTATAA         GCATCAAACAG ACCG CTATTTGCCGC          AATAATCGCTACTCT  55 70
HCN55_RS14265 NONE
HCN55_RS14260 2704118 .. 2704140 -  -4.9  -4.34402   CCTTTCATAGGAAAA           GGGTATC TTTCTATTC GATACCC           TTTCACATTCATTAG  65 37
HCN55_RS14255 2703165 .. 2703178 -  -5.3  -3.14468   TGGTACTATAGTCAA               GACTT GTCC AAGTC                ACCATTATCAAAATG  55 153
HCN55_RS14250 2701991 .. 2702006 -  -6.2  -3.57039   GATGTATAACGATAA              CTAATG TTTT CATTAG               ACTGATTATCCTTTC  61 266
HCN55_RS14245 2701068 .. 2701126 - -21.4  -2.96329   GGAAGGTAATAATGA TGTTTAAAAGGTGTTTTGATCCCTGTCT CAT AAACAGGGGTCAAAACACCTTTGAATCA TCGGTTTCTTTTCTG 100 378
        yrkP NONE
        yrkQ NONE
        psiE 2695536 .. 2695555 -  -8.6  -6.11392   AAACAAATAAAAAAA            CCGATGGT TTGT ACCATCGA             TCTGTTTTCTATATC 100 462
HCN55_RS14210 2695069 .. 2695088 -  -6.4  -3.86481   AATAATGCAGAAGAA            GCCGGA TCTCATAC TCCGGC             TTTCTCTATTTGAAA  66 220
HCN55_RS14185 2693177 .. 2693189 -  -3.4  -4.68424   CAACTGATCCAAAAA                CTTC CTTAT GAAG                AACAATCTCTTCTCT  64 173
HCN55_RS14180 2692675 .. 2692691 -  -5.1  -3.87869   TGAATCCTTTACAAA              CCCTTAC GTG ACAAGGG              TTTTTGTTGTTTTTC  61 148
HCN55_RS14170 2691754 .. 2691769 -  -2.6  -2.73875   CTTTTTTCAAGATGA              CTTTCA TAAT TAAAAG               GCCTCCTTTGTGAAT  41 46
HCN55_RS14165 NONE
HCN55_RS14160 NONE
HCN55_RS14155 NONE
HCN55_RS14150 NONE
HCN55_RS14145 2690375 .. 2690394 -  -3.5  -3.91984   ATAGCCTTTAAAGAA            GTCCACT TTGCCG AGTGGGC             TTTTTTATTGCGCGT  55 30
HCN55_RS14140 NONE
HCN55_RS14135 NONE
HCN55_RS14130 NONE
HCN55_RS14125 NONE
HCN55_RS14120 2686753 .. 2686771 -  -3.8  -3.03443   TTATCAGCAGAGACA             CGACTGCT TTA AGCACTCA             GCATCCGCTCCATTT  47 15
HCN55_RS14115 2686204 .. 2686226 -  -3.3  -3.77588   AGTTCATATCAAGAA           CACTGAGGC TAAGC GCTTCGGTG           TTTTTTATTTTTAGG  52 36
HCN55_RS14110 2685898 .. 2685910 -  -5.5   -2.7566   ATCCAAGCCGAAGGA                GGAGA TAT CCTCC                TTCTTGTTTACCTTT  52 64
HCN55_RS14100 2684188 .. 2684207 -  -3.6  -3.40622   TATCGGCAAAAGAGA            GCGATACAG GTA CTAT-TCGC            AAAATTTGTCGAACG  50 111
HCN55_RS14095 2683669 .. 2683684 -  -5.4  -5.79595   TTTGAAAATAAAAAA              GCTCCT CAAA AGAAGC               TTAAATATGTTTTTT  91 26
HCN55_RS14090 NONE
HCN55_RS14085 NONE
HCN55_RS14080 NONE
HCN55_RS14075 NONE
HCN55_RS14070 2678461 .. 2678478 -  -8.5    -5.093   CTTAAAATAAGAAAA             GACTTCT AATT AGAAGTC              TCACCAGCTGTATTC 100 13
HCN55_RS14065 NONE
HCN55_RS14060 NONE
HCN55_RS14055 NONE
HCN55_RS14050 NONE
HCN55_RS14045 NONE
HCN55_RS14040 NONE
HCN55_RS14035 NONE
HCN55_RS14030 NONE
HCN55_RS14025 NONE
HCN55_RS14020 2672265 .. 2672279 -  -4.2  -2.53213   GAAGTTGTTAAGCCA               GCCC TCTTGAT GGGC               CAACATTTATACTGA  47 192
HCN55_RS14005 NONE
HCN55_RS14000 NONE
HCN55_RS13995 NONE
HCN55_RS13990 NONE
HCN55_RS13985 2664376 .. 2664388 -  -4.1  -3.48024   TCTCATGAGGAAACA                CCATC AGG GATAG                AATTTTTCTCAACCA  52 0
HCN55_RS13980 NONE
HCN55_RS13975 NONE
HCN55_RS13970 NONE
HCN55_RS13965 2662069 .. 2662082 -  -4.5  -2.90194   AGCTGTGTAATCATA               CAAGG ACCA CCTCG                TTATTATTGAGCGTG  48 7
HCN55_RS13960 NONE
HCN55_RS13955 NONE
HCN55_RS13950 NONE
HCN55_RS13945 2660159 .. 2660173 -  -2.8  -2.80511   TTTACAACGGAACCA               CCTCCT TTA AGGAAA               AATAAAAAAGCCCTA  42 38
HCN55_RS13940 2659192 .. 2659221 -  -9.9  -5.65927   GAGGCAAATAAAAAA       GGACAGCCGGATC TTAT GAGACGGCCGTCC        CTCTAACTGAAAAGT 100 9
HCN55_RS13935 2658729 .. 2658749 - -11.1  -5.82172   AGTAAGATAAAAAAA            GCCACTGGC TTA GCCAGCAGC            TTTGTCTGCGTTATT 100 14
HCN55_RS13930 2657840 .. 2657866 - -12.4  -3.03755   AAATAAACATAAGTA         TCTCCTTGAGAA AGA TACTCAAGGAGA         CTATTTATTTACTTC  85 34
HCN55_RS13925 NONE
HCN55_RS13920 2656623 .. 2656643 - -13.3  -3.33671   AGAGTCACTTTATAA            GCCCCTCTC AAT GAGAAGGGC            TTATTTTATTTAATT  95 235
HCN55_RS13885 2651016 .. 2651035 -  -2.2  -3.33298   TGCAAGCAAATAAAT            CAATTTAT TTTG ATTAATTG             TAAAACCCGCTAAAA  45 298
        arsR 2650606 .. 2650622 -  -6.7  -2.59565   AATTTGATATAATAC              CTAAAAA ATT TTTTTAG              CAGCAATCTCCTTCA  57 22
HCN55_RS13875 NONE
        acr3 NONE
HCN55_RS13865 2648584 .. 2648605 -  -5.9  -5.85737   ACATTAATAAAAAAA           GGACACATA TAAA TATGCATCC            TTTAACAAAAGAGTT  93 44
HCN55_RS13860 2646652 .. 2646671 -  -9.2  -4.54821   ATTGTAATTACAAAA            GGGGGGTG CATA CACCCCTC             TTTAATACGTTTCAA  91 27
        nucB 2645662 .. 2645681 -  -9.3  -3.40878   AGGATTGTAACAACA            GAGGCTC AAGAAA GAGCCTC             TTCTTTACTACTGCA  76 33
         gnd 2643768 .. 2643791 -  -8.9  -5.41746   AAGGTGCCAAAAAAA          TAAGGAGGC TTGTTG GCCCCCTTA           CTTTTTTTCTGTCGC 100 23
HCN55_RS13830 2642159 .. 2642187 -    -6  -5.34857   CCAAAGAAAAGAAAA        TAACCTGAATCC GCACT GGAAACAGGTTA        TCCGTTAAATCCTGC  89 43
HCN55_RS13825 2641020 .. 2641037 -  -7.7  -5.14965   ATTTTCAGCAAAAAA             CACCCCT AAAA AGAGGTG              TTTTAAAGGGCCGGT  93 210
HCN55_RS13815 NONE
        yqeH NONE
HCN55_RS13805 NONE
        yhbY NONE
HCN55_RS13795 NONE
HCN55_RS13790 NONE
        rsfS NONE
HCN55_RS13780 2635395 .. 2635416 - -11.7  -5.07053   AAGCATTTTAAAAAA           CCATCGTTT TAGG AAACGATGG            TTTTTGATTTCTGCG 100 12
       comEA NONE
HCN55_RS13765 NONE
HCN55_RS13760 2630691 .. 2630705 -  -2.8  -5.42259   TGATTTTGAAAAAAA               CGTTCA AAG CAAACG               AAATGATGCTGTAGA  79 165
HCN55_RS13750 NONE
        holA 2629392 .. 2629413 -  -8.7   -5.1523   TGCATAATATAAAAA           CGATCCTCA ATAA TGGGGATCG            TTTTTTTCATTTCTT 100 10
         gpr NONE
HCN55_RS13730 NONE
HCN55_RS13725 2626137 .. 2626149 -  -4.1  -4.68601   ATGTAAAACAAGAAA                GAGAA AAG TTCCC                TATCATATCTGGGTT  66 60
        lepA 2624186 .. 2624206 - -12.6  -4.14627   TCTTTACAGAAAGAA            GCCGCAGT ACAAG ACTGCGGC            GGCTTCTATTGTTTT  95 31
        hemW NONE
        hrcA 2621865 .. 2621885 - -11.9   -2.7728   CTCAAAGTGTAAGGA            GAAGGACAG GTG CTGCCCTTC            GATAAAATTTGCCAA  84 48
        grpE NONE
        dnaK 2619308 .. 2619336 - -10.4   -5.7946   CGGGCAAGAAAAAAA        GTCAAAGCCAAG AGATG CCTGACTTTGAC        TTTCTAATCATTGAA 100 103
        dnaJ 2618092 .. 2618105 -  -2.3  -2.72459   CATCCAATAATTAAT               CGCCT TTAA ACGCG                CGTTTTACCTTGTCA  40 7
        prmA NONE
HCN55_RS13685 NONE
        mtaB 2614948 .. 2614969 -  -9.5  -5.95539   GGCTAAATAAAAAAA           TCGGTACAT TTTA ATGCACCGA            TTTTTTAGGTTAAGA 100 35
        rpsU NONE
HCN55_RS13665 2613175 .. 2613197 - -11.4  -5.64274   TTATGTATAAAAAAA           GACATCTCTC TTA GAAAGATGTC           CTTTTCTTTGCCATT 100 40
HCN55_RS13660 NONE
        floA NONE
HCN55_RS13650 2610258 .. 2610299 - -13.9  -4.96848   TGCCCCATACAAAAA GAACCCCCTTTCATCTCAT ATGT ATGATTTGAAAGGAGGTTC  TAACACTTTAATTTT 100 33
        yqfC NONE
        yqfD NONE
HCN55_RS13635 2607765 .. 2607790 -  -9.1  -5.00765   AAGCAATCATAAAAA         TGACCCGAT AACGCGCG ATCGGGTCA          TTCAGCATTAATTTT 100 33
        pgpH NONE
        ybeY NONE
HCN55_RS13620 NONE
HCN55_RS13615 NONE
HCN55_RS13610 NONE
HCN55_RS13605 NONE
        recO 2602005 .. 2602047 - -17.9  -5.30155   GCAGCAACCAAAAAA CTCCCGTCTCTATGCTTGC CAGCC GCAAACATAGGGACGAGAG TTCTCCCGCGGTTCC 100 226
        glyQ NONE
        glyS 2598994 .. 2599021 -  -4.1  -4.18161   TATAAATGGGGAAAA        GACGATTACCG ATCACA CAGCAACCGCC         TTTTCTCTCTTTATT  61 36
        ccpN NONE
HCN55_RS13580 2597402 .. 2597422 -  -4.7  -4.70659   TGGCACAGCCAAAAA            CCCAGGA TAGAGCG TCCTGAG            TTATATGTTTTTTGT  71 26
HCN55_RS13575 NONE
HCN55_RS13570 NONE
        rpoD 2593486 .. 2593515 -  -8.7  -5.40474   ATCTTTTTAAAAAAA       GA-AGAACGGATCT TCA AGACCCGTTCCATC       TTATTCAAGGAAATC 100 26
        cccA 2592770 .. 2592794 -  -9.9   -5.2853   CAGTCAAAAATAAAA          GGCTGTCGAGA ACA TCTCGGCGGCC          TGTGAATGTATAAAG 100 56
HCN55_RS13555 NONE
HCN55_RS13550 2590778 .. 2590798 - -11.2  -5.48054   AGTAAAAGCAAAAAA            CTGAGGCT GTAAA AGCCTCAG            TTTTTTTATAGAAAT 100 31
        cshB 2587477 .. 2587488 -  -2.2  -3.15544   GCCTATTCTCAGCAA                CAGG TTCC CCTA                 CTTTCTTTTCTTAGA  43 23
HCN55_RS13530 2586561 .. 2586578 -  -8.4   -5.1925   TTACAAGCTAAAAAA             TGGGGG TGTTAT CCCCCA              TTTTTTATTGCTGTA 100 30
HCN55_RS13520 2585219 .. 2585253 -    -8  -4.76041   CACATGTATGAAAAA    GAAAATGGC-AGCTG TCTGTC CAGCAAGCCATTTTC     TTTACTGCAGATAAA  88 77
         zur 2584684 .. 2584718 - -14.4  -3.63341   AATACGCGTCAATAA     CTGAAAAAGGAGCCCA AAC CGGGCCCCTTTTTCAT     ATATACGCATTTTAC 100 37
HCN55_RS13505 2583553 .. 2583574 - -14.5  -5.28414   GAAGAAACACAAAAA           GCTTGACGG GAAC CCGTCAAGC            TTTTTTGTGTTAGAA 100 35
        yqgA 2581208 .. 2581232 -   -10  -4.65895   GTTGCTATTTAAAAA          GCCAGGTACC AATAG GGCACCTAGC          TTTCAGAATTAAATC  91 91
HCN55_RS13480 2579378 .. 2579394 -  -4.4  -2.80354   TATATGTACTGAAAT             GC-CGCT TCAC AGCGAGC              CTTTCTTCATTCAAT  48 154
HCN55_RS13475 2578703 .. 2578726 - -10.4  -5.80248   GAAGACATAAAAAAA          CAAGGTCC-CA TAA TGAGGACCTTG          TTTGTGCCATTATTT 100 35
HCN55_RS13470 2577255 .. 2577274 -  -5.7  -5.05113   TTTACAGAAAGAAAA            GACACTC AAGTAA GAGTGCC             AGTTTTCATTTTAAA  78 88
HCN55_RS13465 2575047 .. 2575065 -   -11  -5.93809   TTTGTATAAAAAAAA             CGCCCACA TCA TGTGAGCG             TTTTTTTTTAGTTAT 100 33
HCN55_RS13460 NONE
        pstC NONE
        pstA NONE
HCN55_RS13445 NONE
HCN55_RS13440 2570488 .. 2570504 - -12.3  -5.70829   AACACGATAAAAAAA              CAGGCTG ACT CAGCCTG              TTTTTTTCATCCAAA 100 32
HCN55_RS13425 NONE
HCN55_RS13420 2567910 .. 2567921 -  -2.2  -3.37912   GACTTATATATAATA                CCAC TATA ATGG                 ACGGAATGCTAGGCT  45 46
        rpmG 2567653 .. 2567678 - -10.5  -5.80817   CGGAATAGAAAAAAA         GCCAGAACCTT TTTC AAAGCTCTGGC          TTTTTTCTTACACCT 100 56
HCN55_RS13410 NONE
HCN55_RS13405 2566802 .. 2566818 -    -8  -5.38497   ACTGAAAGCAAAAAA              TCCCGT TTTTC ACGGGA              TTTTAGAAAGCTTGC  95 28
        glpG 2565170 .. 2565187 -  -4.8  -3.53566   AGTCAAGAAGAAAAC             GCTGAC AAAAAA GCCAGC              TTCCTTTCCATATTC  57 46
HCN55_RS13395 NONE
HCN55_RS13390 2563858 .. 2563868 -  -2.6  -3.94333   CATTAACACATCAAA                 TTAA ATC TTAA                 CCTGAGCACAACAAA  52 64
HCN55_RS13385 2561839 .. 2561866 - -10.6  -5.21683   ATTTAAAAAAAGAAA        GCCTCCCGC-TCA CTT CGATGCGGGAGAC        ATTGTGATTATGATG 100 33
HCN55_RS13380 2560584 .. 2560596 -  -6.3  -4.92812   GCAGAATAAAACAAA                CTGAT CTC ATCAG                CATTCCCCTCCGATC  80 90
HCN55_RS13370 2559193 .. 2559214 - -13.1  -4.35518   AACCGCACATTAAAA           CCTGTATCC GATC GGATACAGG            TTTATTTTTATGGCT 100 33
HCN55_RS13360 2558195 .. 2558219 -   -13  -4.03204   CATTAAATGCAGAAA          GAGACAAACC TTATC GGTTTGTCTC          TTTTTTTACAATGAA  95 31
        mgsR 2557281 .. 2557320 -   -13  -4.66953   TGAACAGGTGAAAAA  CCGAAGATAAGCTGATTC GTAT AAATCAGCGGATCTTCGG   TTTTTCATCATGCAG 100 33
       rsbRD 2556207 .. 2556235 -  -9.6  -5.20154   ATAGAAGTTAAAAAA        GCTGAATAGCCC GTGAA AGGCTGTTCAGC        TGCTATCTTTCAAGA 100 58
        corA 2553554 .. 2553576 - -14.2  -5.72622   CCTATAAATAAAAAA           GCAGACATGG TCA CCATGCCTGC           TAGATTCCATTTTCA 100 240
       comGA NONE
       comGB NONE
       comGC NONE
       comGD NONE
       comGE NONE
       comGF NONE
       comGG NONE
HCN55_RS13290 2548960 .. 2548981 -  -2.9  -6.00814   AAGAAGCAAAAAAAA           GGTACCCGC TCGC ACAGGTACT            GTTCAAACAAAAAGT 100 233
        tapA NONE
HCN55_RS13275 2547207 .. 2547218 -  -5.8  -3.71378   GATTTTATATCGAAA                CCTG TTGC CAGG                 TTTACAACTGAAGTT  63 39
        tasA 2546332 .. 2546369 - -17.1  -2.93073   TTTTGTCAATAACCA   TCGAGACGGCCCAGTAT ATGA ATACTGGGCCGTCTCTT    TTTTTTGCTGTTATT 100 39
        gcvT NONE
HCN55_RS13240 NONE
HCN55_RS13235 2538684 .. 2538704 - -14.1  -4.30977   AAGAAATAAAGCAAA            CAGCTGTCT GGT AGACAGCTG            TTTTTATTTATCTTT 100 33
        lipM 2537230 .. 2537243 -  -2.4  -3.43071   GTTTACACTAATGAA               CTTG AAAAAA CAAG                GATGCTCCGCGGGTC  45 52
        mntR 2536717 .. 2536738 - -10.1  -5.15634   CAGCGTATCAAAAAA           GACGGCCTC CTTC GAGACCGCC            TTTTTACTGATTATG 100 29
HCN55_RS13215 2535680 .. 2535695 -  -2.5   -5.7946   TTCTCAAGAAAAAAA              GCCAG ACTCAG CTGAC               TGTTATAGAAGGGAA  93 71
HCN55_RS13200 2533543 .. 2533561 -  -7.5  -5.08824   TTCTCATGTAAAAAA             TGTTCAC TTCTC GTGAACA             TTTTATCATACTGGA  93 54
        aroQ NONE
        papA 2532002 .. 2532021 -  -2.2  -2.74563   CCTATATTCCAATCA            CAAAATAA TAAG TTCTTTTG             GGGAATGGGTGATTG  40 3
         efp 2531379 .. 2531402 -   -11  -5.60993   TTGGGCACAAAAAAA          GCCTGCTCCC ATTT GGGAACAGAC           TTCTTTTTTTCTTTC 100 40
HCN55_RS13180 NONE
    spoIIIAA NONE
HCN55_RS13170 NONE
    spoIIIAC NONE
    spoIIIAD NONE
    spoIIIAE NONE
    spoIIIAF NONE
    spoIIIAG NONE
    spoIIIAH 2525621 .. 2525639 - -11.7  -4.76892   ACAGCAACGCAAAAA             GCCCGCT TGTTT AGCGGGC             TTTTTTCCCTCATTC 100 41
        accB NONE
        accC NONE
        yqhY 2523189 .. 2523211 -    -7  -5.43866   TAACGTGTAAAAAAA           CCAAAGGG CCGCCCT CCCCTTGG           TTTCGTGTTAAGCCA 100 42
        nusB NONE
        folD NONE
HCN55_RS13110 NONE
HCN55_RS13105 NONE
HCN55_RS13100 2518910 .. 2518924 -  -6.4  -4.42386   CCTGTATTGATAAAA               GATCCA AAG CGGATC               AACTCACTTTCAGCA  76 192
HCN55_RS13095 NONE
HCN55_RS13090 2516156 .. 2516179 - -11.2  -5.31456   TGAATGCAGAAAAAA          GGAATAATAG CGCC CTATTATTCC           GGTACATCTGCTTTT 100 19
        argR NONE
        recN 2513837 .. 2513861 - -14.4  -5.52384   TGTGCACGAAAAAAA          TAAGCTGCGC TTCTC GCGCAGCTTA          CCCAGTTGTTTTGAC 100 23
      spoIVB 2512385 .. 2512403 - -14.6  -6.11229   ATCAAAATAAAAAAA             CTGCCGGA AAC TCCGGCAG             TCAGCTTGCTTTTTC 100 26
       spo0A 2511253 .. 2511292 -  -8.8  -5.07652   GTCCCCAAAACAAAA  CGCCTCCTATTTATCAGC GCAA ACTAATAAATAAAAGACG   TTTGATTTAATGACC 100 58
HCN55_RS13055 NONE
HCN55_RS13050 NONE
HCN55_RS13045 2507439 .. 2507461 -  -7.7  -5.32565   GAATGAATGAAAAAA           GAAGGCTGC GTCAA ACAGCCTCC           TTCTAACAACTATTC  95 35
HCN55_RS13040 NONE
HCN55_RS13035 2505271 .. 2505284 -  -5.3  -3.08679   CCCCCGGATGGAATA               GACTT CAGG AAGTC                TTCTCCTCATAGTCA  53 16
HCN55_RS13030 NONE
        mmgD NONE
HCN55_RS13020 NONE
        prpB 2500569 .. 2500586 - -12.7  -5.45726   GATAGCTGAAAAAAA             GCCGGAG AATG CTCCGGC              TTTTTTTGTTGCATT 100 39
HCN55_RS13005 NONE
        yqiS NONE
HCN55_RS12995 NONE
HCN55_RS12990 NONE
        lpdA 2493417 .. 2493427 -  -6.8  -3.80855   GCTTTTAAAAATGAA                 TGGC TTT GCCA                 TCTGCGGCAAGCGCA  66 4
      bfmBAA NONE
HCN55_RS12975 NONE
       bfmBB 2490052 .. 2490086 - -14.6  -5.06585   TAAAGCATAGAAAAA     GAGCATTTTTTGAAAC AAA ACTTCAAAAAATGCTC     TTTTTGCTTATTTAG 100 37
        brxB 2486333 .. 2486356 -  -7.4  -5.64274   TTATGCACAAAAAAA          CCCGGGCTGCT TTG AGCATCC-GGG          TTGTTCGTCTTATAC 100 35
        artP 2485301 .. 2485322 - -10.2  -5.10461   CCTATTCAATAAAAA           GGCTCAAC GAAAAA GTTGAGCC            GCTTTTTTTTACTTC 100 34
        artQ NONE
        artR 2483843 .. 2483864 -  -5.2   -5.4505   TTCTTCAATAAAAAA           GAAG-AGGC GGCCA GCCTTCTTC           TTTTTTATATTCTAT  88 37
HCN55_RS12930 2482781 .. 2482834 -  -7.1  -5.64304   GAACATAAGAAAAAA CGCATAAGCTCCTCCTTTTTCATTAG GTTGA CCAATGAA---GGAAGAGCTCATGCG AATCATCCGAGTGAT 100 28
HCN55_RS12925 2482219 .. 2482238 -  -2.9  -3.15544   CTGTACTCTCAGGAA            TCGTCAT GTTTCT ATAACGA             TAAAAAAGCAGGCGC  45 42
         mce NONE
HCN55_RS12910 2480121 .. 2480133 -  -7.7  -2.89602   CCCTCCATATTAAAG                CGGTA TGT TACCG                TGCTTTTTTTTCGGT  64 7
HCN55_RS12905 2478947 .. 2478957 -  -8.2  -5.47821   ATGGAGCTAAAAAAA                 CCCG ATG CGGG                 AAATCGCACTCGGGT 100 50
HCN55_RS12885 2475502 .. 2475512 -  -2.6  -4.17023   TTAATCATTTTAAAA                 TTTA AAT TAAA                 ATAAAATGATATTTA  55 84
        gndA 2474016 .. 2474041 - -15.5  -4.89477   TCCTTAATAACAAAA         CCCCCAAAGCT TAAG AGCTTCGGGGG          TTTCTATTGATTACT 100 36
HCN55_RS12870 2471045 .. 2471070 -  -4.7  -5.54192   ATTAACGTAAAAAAA         GACCGGG CCGTAAGGGATT CCCGGTC          TTTTATATTATTTTG  88 265
HCN55_RS12850 2467307 .. 2467327 - -14.1  -4.98857   ATGTAAGGACAAAAA            CAGAAGGCA CAG TGCCTTCTG            TTTTTTATTTTTCCC 100 30
HCN55_RS12840 NONE
HCN55_RS12835 2464210 .. 2464239 -  -2.2  -2.55378   AAGCAGAGCATGAAG       GACTTCTGAATG AACTGA CATTCAACAATC        TCTCCCTTCCACTAT  40 92
        dsdA 2462843 .. 2462863 -  -6.9  -4.13767   CTCTGTAGGTTAAAA            CCCTTACAA AGA TTGTAACGG            AAAACCTTTTCACTG  73 46
        coaA NONE
HCN55_RS12820 2461266 .. 2461288 -  -9.9  -5.63517   GCTTTAAATAAAAAA           CGGAAGAGA ATGAA TCTCTCCCG           CAAACATGAGGTGAA 100 200
HCN55_RS12800 NONE
HCN55_RS12795 2457401 .. 2457413 -  -3.5  -3.28712   CTCTTTTTCTCACAA                TATAA AAA TTATA                TTTTGCCTGGCTGGA  47 143
HCN55_RS12790 NONE
HCN55_RS12785 NONE
HCN55_RS12780 NONE
HCN55_RS12775 NONE
HCN55_RS12770 2454890 .. 2454915 -  -9.8  -5.64304   CAACAGAATAAAAAA         GCGAAAG-GCC TCTTC GGCTCTTTCGC         TTTTTTATGTTACAG 100 35
HCN55_RS12760 2453559 .. 2453580 - -11.6  -4.95155   CTCATAGCAGAAAAA           CCAGCACC TGTACG GGTGCTGG            TTTATTTATATTGAT 100 27
HCN55_RS12745 NONE
HCN55_RS12740 2450494 .. 2450539 -  -9.1  -4.99043   CCGCGAGAAACAAAA GCAGACTGCTCCTCA-GGCCA TAGAAT TGGCCACGTGGAGCAGCCT-C GACTTTACCATTTCT  93 139
        ansA NONE
        aspA 2447598 .. 2447635 - -10.2  -3.55444   TCCCTATGTTGTAAA  CAGCTTATTCA--TCCGA CTAT TCGGAGATGAATAAGCTG   TATTTTATACAAATT  80 41
        mleN NONE
HCN55_RS12715 2444732 .. 2444755 - -13.2  -5.89921   ATGATAAGAAAAAAA          CAGCACCTGC TACG ACAGGTGCTG           TTTAGCTACATTTAT 100 37
HCN55_RS12710 NONE
      spoIIM NONE
         fur 2443107 .. 2443127 -  -8.3  -5.34055   AGAAACAGCAAAAAA            CCCTTTCCC CAT GAGAAAAGG            TTCGCGCTCGGCACC 100 43
HCN55_RS12695 NONE
        xerD 2441878 .. 2441895 - -12.7  -5.63517   GCTCTAAACAAAAAA             GCCGCAG CCAC CTGCGGC              TATGCTCGCGGATGA 100 25
        deoB NONE
HCN55_RS12680 2439668 .. 2439697 - -12.3  -5.60993   TTGGGCATAAAAAAA       GACAGCTGTGT GATATCAG ACACAGCTGTC        TTTTGGTCCTGCATT 100 50
HCN55_RS12675 2438355 .. 2438366 -    -3  -3.06183   TCGATTTCGACGGAA                TGAA TTCC TTCA                 CCGTGACAAAACTAG  43 57
     spoIIAA NONE
     spoIIAB 2437519 .. 2437530 -    -3   -2.7186   AAATCTCCTTAATTA                CAAA GCGC TTTG                 CTTTTTGATAAGTGC  41 7
        sigF 2436715 .. 2436737 - -14.2  -5.24129   CTTTTGCACAAAAAA           GCTAGCCTGC ACT GCAGACTAGC           CATCCGTATGATCCA 100 21
      spoVAA 2435993 .. 2436005 -  -3.4  -2.64704   GAACAATACACTAAC                GATC ATGCA GATC                CTTTATGGTTTCTTG  43 8
      spoVAB NONE
      spoVAC NONE
      spoVAD 2434085 .. 2434097 -  -3.4  -3.20078   TAGTCCATATTAAGA                TGCA CCTCC TGCA                CGCTCAAATACAACC  47 7
      spoVAE NONE
     spoVAEA NONE
      spoVAF 2431604 .. 2431624 -  -6.9  -3.76224   CGCTTATGGATGAAA            GGACAGT TTTATGG ACTGTCC            CTTCATAATTAAGAC  69 77
        lysA 2430227 .. 2430244 - -12.7    -5.011   ATTCAAATAAGAAAA             GCGCCGA AAAA TCGGCGC              TTTCTTTTATTGCTT 100 32
HCN55_RS12610 2428629 .. 2428649 - -14.1   -5.7946   TGGCCAATAAAAAAA            GCTTCCTCT CTA AGAGGAAGC            CTTTTGCCTGCCGAT 100 40
HCN55_RS12600 2427119 .. 2427132 -  -5.3  -6.08342   TAATAAACAAAAAAA               TGCAA CAGT TTGCA                GACGCGTCTTGTGAG  95 340
HCN55_RS12595 2426233 .. 2426243 -  -3.2  -5.86332   CGAATCGAAAAAAAA                 TCCC ATT AGGA                 CCATTGAAGTGATTT  88 402
        lepB 2425593 .. 2425613 -  -6.8  -5.82281   AAAGATATAAAAAAA            GCAGCCCC AATGG GAAGCTGC            TTGATCCTAATTTGT  93 32
HCN55_RS12580 2425005 .. 2425041 - -16.1  -4.88388   ACAATTTGAGAAAAA    CAAAACATCACCCTTCG ATC CGAAAGGTGATGTTTTT    TAATCATTCACTTTT 100 25
        ribD NONE
        ribE NONE
HCN55_RS12565 NONE
        ribH NONE
        ribT 2420685 .. 2420708 - -13.2  -5.97575   AACGCAGAAAAAAAA          GCAGAGACTG ATCA CAGCCTCTGC           TTAATTATTGTATGA 100 26
        scpA NONE
        scpB NONE
HCN55_RS12535 2417931 .. 2417951 - -11.2  -5.88197   GCAAACATAAAAAAA            CTCTCCCT GAAAA AGGGAGAG            TAAACGTTATCTGAT 100 32
HCN55_RS12530 NONE
        spmA NONE
        spmB 2415560 .. 2415574 -  -4.2  -5.89947   CAAATCTAAAAAAAA               CGCC GTTTTCA GGCG               CTCCCAAATAATAAC  91 19
        rluB NONE
        resA NONE
        resB NONE
        resC NONE
        resD NONE
        resE 2408656 .. 2408676 - -12.6  -5.52384   TGGCTATTAAAAAAA            CACCCGCT CAGTC AGCGGGTG            TTTCTTATGGAACAA 100 68
        sigX NONE
        rsiX 2406870 .. 2406885 -  -6.1  -5.31059   ATAGCAACTAAAAAA              GAGCC TTAAAG GGCTC               TTTTTAGTTTAAGGA  89 29
HCN55_RS12475 2405977 .. 2405996 - -10.8  -5.68023   CCATAATTAAAAAAA            CTCAAGCT ATAT AGCTTGAG             TTTTTTTATTGTTCT 100 39
        fmnP 2403297 .. 2403312 - -10.4  -5.66868   AAGTAACTAAAAAAA              GCTCCC GAAC GGGAGC               TTTTTTATTTAATGG 100 34
HCN55_RS12455 NONE
HCN55_RS12450 NONE
HCN55_RS12445 NONE
HCN55_RS12440 NONE
HCN55_RS12435 2398358 .. 2398369 -    -3  -3.29144   CCATTCTTTTTAGAA                CTTA TCAA TAAG                 ACGGACAATAAAAAA  46 74
HCN55_RS12430 2397427 .. 2397446 -  -6.6  -4.04206   CTACTTGCACACAAA            TCATATAA CACA TTATATGA             GATGATGAGTCATAG  70 132
HCN55_RS12425 2396779 .. 2396794 -    -9  -5.95166   TTTAACGAAAAAAAA              CTGCTG AAAT CAGCAG               TTTTCCGTTGCATTC 100 41
        gudB 2395322 .. 2395343 -  -7.4   -5.7946   TTCCGAATAAAAAAA           TCTCCTAT TTTATC ATAGGAGA            TTTTTTATTTTTATG 100 53
        ypdA 2394256 .. 2394280 -  -9.4  -5.86609   TTAAAAAAACAAAAA          GAGCATACGA ATGCA TCATATGCTC          CTCATCTTTAATGGT 100 33
        prsW 2393489 .. 2393509 - -12.5  -5.37043   ACTGCACACAAAAAA            GCCGCACGG TTG CTGTGCGGC            TTCTATACTTGCATC 100 28
        sleB NONE
        ypeB 2391038 .. 2391060 -  -8.5  -5.64006   ACGTAATGAAAAAAA           GGAAAAGAC ATTTA GTCCTTTCC           TCCTGTTTTTATAGG 100 34
        dgrA NONE
HCN55_RS12390 2390107 .. 2390123 -  -3.7  -2.73203   TGATGAATAATTAAT              GTTTGAA GGT TTCAATC              CTATTGTTTTCCTCC  45 4
HCN55_RS12385 2389217 .. 2389241 -  -9.5  -4.01902   ATATGTATTAAAGAA          TCATCCAAAAA AGT TTTTTGAATGA          TCAATAAAAAGTTTT  85 133
        rpsA NONE
HCN55_RS12375 2386872 .. 2386896 -  -9.4  -5.16133   ATCATAATACAAAAA         GCCC-AAACCA CATA TGGTTTTGGGC          TTTTATCATTTATCG 100 35
HCN55_RS12365 NONE
HCN55_RS12360 NONE
HCN55_RS12355 2384912 .. 2384927 -    -9  -4.72007   TTTTATGAAAAGAAA              CCCTTC AGAG GAAGGG               CTTAACTCATTTATT 100 72
        engA NONE
        gpsA 2382225 .. 2382254 -  -9.4   -5.9218   GATAGAACAAAAAAA       CTGAAGCAAAGA GGGGGA CCTTCGCTTCAG        TCAACTTGACTATAT 100 226
HCN55_RS12340 NONE
HCN55_RS12335 2381124 .. 2381156 -  -9.3  -5.82172   ATTAATATAAAAAAA      CCTTTCTCCCT ATTTGTATGCA AGGGAGAAAGG      TTCATTCCTTTTTCA 100 27
      spoIVA 2379467 .. 2379490 -  -3.2  -5.69793   AGAGCAAAGAAAAAA          GACCTC-CCAT TCT ATAAAGAGGTC          TACCGGTATTACAGG  84 34
         hbs 2378765 .. 2378793 - -14.7  -3.34715   CATGCTCTTGAAATA        TGAAAAGCCCCTT AGA AAGGGGCTTTTCT        GTGAAGAAATAAAGT 100 79
        folE NONE
        mtrB 2377823 .. 2377837 -  -2.7  -3.01924   CATTTGCTTTTAACA               GCGGG GACAG CCAGC               TTATTTTTTTTCGCT  43 26
HCN55_RS12310 NONE
        menG NONE
        hepT 2375188 .. 2375198 -  -6.8  -3.48064   CTGATAATTAATCAA                 TCCG GGG CGGA                 GAAATTTCTTAATAT  64 50
         ndk 2374502 .. 2374517 -  -7.6   -5.7946   GTTTCAATAAAAAAA              TCAGCT TTTC AGCTGA               TTTTAGATCGTTGGG 100 166
        cheR 2373631 .. 2373644 -  -2.5  -3.21438   AACTACTATAACATA               TTTTT CAGC AAAAA                GTCAGTCTATCTTTT  45 32
        aroC NONE
HCN55_RS12280 NONE
        aroH 2370792 .. 2370815 - -12.6  -4.76087   TATATAACAAATAAA          CCCAAAAGAA AGGC TTCTTTTGGG           TAGAATAAACATACA 100 146
HCN55_RS12270 NONE
        trpD NONE
        trpC NONE
HCN55_RS12255 NONE
        trpB NONE
HCN55_RS12245 NONE
HCN55_RS12240 2363695 .. 2363715 -  -9.8  -3.88498   GGTTTATAGACTAAA            GAGGTGAT ATTTG ATCACCTC            TTATAAAATTTCAGC  85 26
HCN55_RS12235 NONE
        aroA 2361240 .. 2361260 - -12.7    -5.252   GATCTGCATAAAAAA            TCCTGAAGT AAA ACTTCAGGA            TTTTTTCGAAAGCTT 100 20
HCN55_RS12225 NONE
HCN55_RS12220 2359007 .. 2359028 - -10.9  -3.65046   CCTTTACGGCAACAA           GCCTTGCAA TTCA CTGCAAGGC            TGGTCATATTATGTG  88 34
HCN55_RS12215 NONE
HCN55_RS12210 NONE
        qcrB NONE
HCN55_RS12200 2356349 .. 2356365 -    -8  -5.36441   TGTCCATATAAAAAA              GCTGAC GCCGG GTCAGC              TTTTGATAATAAAAG  95 72
HCN55_RS12195 NONE
        ypjB 2354820 .. 2354836 - -10.8  -5.48063   ATGTAATAGAAAAAA              GGCGGC TGACC GCCGCC              CCTCATCCTTATTTA 100 34
HCN55_RS12180 NONE
HCN55_RS12175 2352616 .. 2352627 -    -3   -2.8372   CATGCGCGATCAAAG                CAAT TTTC ATTG                 TTTATCCCCCCGTCT  42 39
        mgsA NONE
       bshB1 NONE
        bshA NONE
HCN55_RS12155 NONE
HCN55_RS12150 2348034 .. 2348054 -  -6.2  -5.15969   CTGCAAGCCAAAAAA           CCTTC-CGT TACA ACGAGAAGG            ATTCTTCACTTTCTA  83 190
        panB NONE
        panC NONE
        panD 2345869 .. 2345884 -  -7.5  -5.10163   AATCTTAAAAGAAAA              CCCCC GATAAA GGGGG               CTTTTCTTCTACAAA  93 34
        dinG 2342955 .. 2342969 -  -8.5  -4.16943   TCCCACACCGCAAAA               GCCGC TTTAT GCGGC               TTTTATTCTTTTTCC  79 28
HCN55_RS12125 NONE
HCN55_RS12120 NONE
        aspB 2340930 .. 2340949 -  -6.4  -5.00642   CAATGCAGATAAAAA            GCGGCT TTTCTGTC AGCCGC             TTTTTGATCTGTTAG  82 37
        asnS 2339483 .. 2339500 -  -7.7  -4.62069   CCTTTACTGTAAAAA             GTCTCCC TTGC AGGAGAC              TCTTTTTTGTTTCAT  84 50
        dnaD NONE
         nth NONE
HCN55_RS12095 2337543 .. 2337562 -   -10  -5.60689   GTACACAATAAAAAA            CCTCCCGT TTTA ACAGGAGG             TTTTATCGATTCATC 100 28
HCN55_RS12080 2333076 .. 2333098 -   -15  -3.05384   CGCCCTTCTACGTAA           GAAGCAAGGA ATT TCCTTGCTTC           TTTATTTTTTCAGCC 100 27
HCN55_RS12070 2332530 .. 2332540 -  -2.4  -2.71325   TCACTCACAAATTCA                 GCCG ATG CGGT                 ATACCTTCTCAAACG  40 12
HCN55_RS12065 2332092 .. 2332129 - -10.1  -4.82901   GGCCCCCTATAAAAA   CGAAAAGAAGACAGCC TTTTACC GGCTGTCTTCTCTT-G   CAATTTCATCCTTTA 100 6
HCN55_RS12055 2331285 .. 2331315 - -12.8  -5.00616   TTTCTTTCCAAAAAA       TAAGCATGAATGAA CGA TTCATTCATGCTTC       TATCATTTAAAAAAG 100 28
HCN55_RS12045 2330216 .. 2330233 -  -9.1  -5.80364   AGTTGAATAAAAAAA             GCAAGGC ATAC GCCCTGC              TTATTTCGCTTTTAT 100 26
HCN55_RS12040 NONE
HCN55_RS12035 2326629 .. 2326643 -  -8.6   -3.1855   CCGGGGAATATTTAA               GAGGAA TAT TTCCTC               TTTAGCCGGGCAATT  71 7
HCN55_RS12030 NONE
        cotD 2326018 .. 2326037 -   -10  -5.00884   ACCTGCTTTAAAAAA            TGGGGCTCC CGT GG-GCCCCA            TTTGTTGTGCTGCAT 100 73
HCN55_RS12020 NONE
        gpsB 2325027 .. 2325037 -  -2.6  -3.46509   CGTTAAGAACATGAA                 TTAT TAT ATAA                 CAACTGATTACAATT  46 68
        rnpB 2324578 .. 2324598 -  -8.3  -4.66537   CTTTTCAAGATAAAA            GCTCTCC TTATACG GGAGAGC            TTGTTTTCATCATTT  88 61
HCN55_RS12005 2323350 .. 2323372 -  -9.2  -4.00532   GGCTGAAAGATGAAA           GAAGACGC ATGCAGA GCGTCTTC           TTTTTATGCGTTTTC  85 29
HCN55_RS11995 2322790 .. 2322804 -   -10  -5.64304   GAATACAATAAAAAA               CTTGGC AAT GCCAAG               TTTTTTGCAGTTTAC 100 37
HCN55_RS11990 2320760 .. 2320779 - -12.2  -5.72622   CTGACAAATAAAAAA            GCTGACGA ACGA TCGTCAGC             TTTTTTCCATTACAT 100 35
        kdgR NONE
HCN55_RS11970 NONE
         eda NONE
        kdgT 2315240 .. 2315265 -  -4.7  -4.37092   ATTGTTTGTATAAAA         GGCTGCC GGTATGTTTTGT GGCAGCC          TTTTTATTCAGTTGA  68 33
        ypwA 2313357 .. 2313389 - -12.1  -5.89921   ATGAGAATAAAAAAA      GCATTGCCCGCTC AAATAAA GAGCAAGCAATGC      TGATATCACAAAAAA 100 292
         xpt 2312752 .. 2312766 -  -3.5  -3.39895   TTTCTCATGAATGAA               CCTCC TGTAC GAAGG               ACACTTTTCCTTCTT  48 0
        pbuX 2311412 .. 2311427 - -10.4  -5.83822   TATATGCAAAAAAAA              CTCCGC CGCG GCGGAG               TTAGACTGCTGTTTT 100 26
HCN55_RS11940 NONE
        bpsB 2309735 .. 2309745 -    -4  -2.58427   AACATGGTTGAGAAT                 GATT TTC AATC                 GCTATTTTACGCTGT  45 27
        fbpC 2309527 .. 2309543 -  -7.9   -5.5208   GGAGAATAGAAAAAA              GCCGCCA TTA CGGCAGC              TTCTATAAAAGAAAA 100 69
        dynA NONE
HCN55_RS11920 NONE
HCN55_RS11915 2305249 .. 2305274 - -10.6  -5.93252   CCCAAAAATAAAAAA         CAGTATCTCT TTAATT AGAGATACTG          TTTGAATATTTATCA 100 38
HCN55_RS11910 2304283 .. 2304314 - -12.5  -4.77629   AAAAGCAATACAAAA      CGCTAGAGAGGATC TAAAC GATC-TCTCTAGCG      TTCAGCTTTTCAAGC 100 7
HCN55_RS11890 NONE
HCN55_RS11885 2302063 .. 2302089 - -16.8  -4.02051   GATGAATTCAAAGAA         TAAAAACCGCAG CTT CTGCGGTTTTTA         TTTTTAGTGATTGGT 100 29
        degR 2301439 .. 2301458 - -13.6  -3.37299   GAGATGACAAATAGA            GGAGAGGC ATTC GCCTCTCC             TATTTGATTTTCATC 100 25
HCN55_RS11850 NONE
        hdhQ NONE
HCN55_RS11840 2295983 .. 2296035 -  -9.4   -4.8543   TAATTTTTATAAAAA GTGAATTCACATAAAAAAGGTGCA TGATC TGCACCTTTTTTATCTTTATTCGC CTTTTTTTCTGCTTT 100 18
        ilvD 2293964 .. 2294012 -  -9.2  -5.72616   ATTGACATAAAAAAA GCCCCCTC--TAGTATCCTTCA TCTGAAG TAAAGGATACTATAGAGAGGGC CGGATTTCAAATGTT 100 76
        brxA 2293504 .. 2293520 -  -9.4  -5.26119   CTCCCAAAAAGAAAA              TGCCCG GAGAA CGGGCA              TTTAGCAGTGCGCAT 100 27
HCN55_RS11825 2292693 .. 2292714 - -14.5  -4.24075   ACCGATTAACAGAAA           GCCCGTGAT ATGA ATCACGGGC            TTGTTTGAATGACGC 100 18
HCN55_RS11820 NONE
HCN55_RS11815 2291252 .. 2291273 - -10.3  -5.64304   TAACACAATAAAAAA           TCATTTCTG AACC CAGAAATGA            TTTTTTTATAGTCAG 100 37
HCN55_RS11810 NONE
HCN55_RS11805 NONE
HCN55_RS11800 2289258 .. 2289278 - -12.6  -4.73094   AACAGTAACAGAAAA            GCGCAGTC TTCAC GACTGCGC            TTTTTTATGCACGTA 100 30
        ilvA 2286026 .. 2286042 -  -2.1  -2.71268   TTCTATTATATATGA              TGCCAGC CGG GCTGTCT              GTCATTTTGCGCGGT  40 53
HCN55_RS11780 2285674 .. 2285719 -  -6.9  -5.86965   ACTGAGCAAAAAAAA TCCTGCATGCCTCCCCATTA ACGATTA CAAAGGAG-GGCATGCAGGT AAAAAACGGCATGTT 100 39
        scuA NONE
HCN55_RS11770 NONE
HCN55_RS11765 NONE
        ypmT 2283354 .. 2283373 -  -2.1  -5.23316   GACCACACGAAAAAA            GAGACGT TGTTTC ATGTCTC             TTTTTTCATGACTTA  69 31
HCN55_RS11755 2281927 .. 2281952 - -10.5   -5.4477   AAACGGTGAAAAAAA         GCACATACCGA TATA TAGGTATGTGC          TTTTCGCAGTGCTTC 100 43
        msrA NONE
        msrB 2280358 .. 2280386 -  -9.6  -4.98758   AAAAAGGCATAAAAA        CAAGCCTGTCTA TCCAT TAGGCAGGCCTG        TTTTTAACAGTTTAT 100 37
HCN55_RS11725 2276993 .. 2277022 -  -9.4  -4.43909   AGGTTAATAAAAGAA       GCCAGAGAGT ATGTGAGGGA ACTCTCTGGC        CTATAGTGGTTGATA  91 162
HCN55_RS11720 2276364 .. 2276377 -  -3.9  -3.14463   AATTTCCTTCACTAA               GTAAA TCAC TTTAC                AAATCCACCAAAAAT  48 85
HCN55_RS11715 2275992 .. 2276015 -    -3  -4.52873   TCGTTATAAAAATAA          GCGCTCTCCC CTTC GGAAATACGC           CTGGCTATTTATTAC  60 112
HCN55_RS11710 2275354 .. 2275379 -  -9.8  -2.93765   TAAAAGAAGTAATCA         CCCAAACTAC TCCTTT GTAGCTTGGG          GAAAACATAAAAACA  70 452
HCN55_RS11690 2271722 .. 2271736 -  -2.9  -5.14819   AAAGTAAAAAAGAAA               TTCAA AGAAG TTGAA               GCTACTTTCGGAAAA  70 192
HCN55_RS11680 2270790 .. 2270809 -  -8.6   -5.2015   TGAATAACAGAAAAA            GACAGCCA GAAC TGACTGTC             TTATACATCACACTA 100 38
HCN55_RS11675 NONE
HCN55_RS11670 NONE
HCN55_RS11665 NONE
HCN55_RS11660 2267100 .. 2267124 - -10.7  -2.87344   CAGCTTTTGTACAGA          GCCAGGGTGCT ACC AACACCCTGGT          CTTTTTATTTTATGC  77 191
HCN55_RS11650 NONE
HCN55_RS11645 2265795 .. 2265821 - -10.2  -4.56133   CCCCAATAAGTAAAA         TGCCCAGCTC TTTATTT AAGCTGGGCA         TTGTTTTCATTATTT  91 39
HCN55_RS11635 NONE
HCN55_RS11630 NONE
        sunI 2263255 .. 2263278 -  -9.7   -5.4492   TATAGATACAAAAAA          GTACCTTCT ATTGTA AGAAGGTAC           TTTTTTATGTTCAAA 100 36
        sunA 2262787 .. 2262811 - -14.5  -2.60496   CCCCGCTTTAAATAT          GAGGGAATATT TAA AATATTCCCTC          TACAAATGTTTTATC  95 36
        sunT NONE
        bdbA NONE
        sunS NONE
HCN55_RS11600 2258438 .. 2258461 -  -5.4  -5.86609   GGAAAAAAACAAAAA          CAAGTTCT AAAAAAAG AGAACTTG           TTTAAATAGCTTTTT  91 90
HCN55_RS11535 NONE
HCN55_RS11530 2239919 .. 2239948 -  -8.7  -4.48317   GTATAAAACAAAGAA       TCACTTTGTCCCC CGAT AAAGACAAAGTGA        TTTTAAAATTAGCTA  90 34
HCN55_RS11525 2239029 .. 2239041 -  -5.5  -2.72092   AGAAATATTAGATTA                CCCTG TTC CAGAG                GGTCAGTCATACGTG  50 436
HCN55_RS11405 2221768 .. 2221778 -    -4  -5.65496   GATTAAAAACAAAAA                 GAAT GCC ATTC                 GTGACATCTCACAGA 100 304
HCN55_RS11370 2214367 .. 2214377 -  -5.4  -2.53255   AGAATAGCTACTAAT                 GTTC TTC GAAC                 TCTTTTTTTAAAAGA  51 10
HCN55_RS11365 2213615 .. 2213629 -  -7.8  -4.87133   ATTTTCTAAAGAAAA               GCCCCA AAA TAGGGC               TTGTTTTTAATGCTC  88 32
HCN55_RS11360 2213050 .. 2213076 - -10.3  -3.16668   TAATATGGGTAGGAA         CTAAAGGAGAA GTTCA TTCCCCTTTAG         CTTAGCTCTCATCGG  79 34
HCN55_RS11355 NONE
HCN55_RS11350 2212539 .. 2212563 -  -7.2  -4.44608   TGTATCGAAAAATAA          GGAACGATAA TTGCC TTACCGCTCC          CTTATTTATAACGCA  79 44
HCN55_RS11345 2211210 .. 2211226 -  -4.4  -4.39426   GAGACCCCTATAAAA              CCCTTA TGTAC CAAGGG              TTTCAAAAACGATTT  66 67
HCN55_RS11340 2210353 .. 2210367 -  -2.9  -3.46336   ATCTGAAGCTAAACA               TTCTT TATTC AAGAA               AAGAATCGCTGCTTT  46 92
HCN55_RS11335 2208564 .. 2208583 -  -7.9   -5.4251   CTGATACATAAAAAA            GACCAAG ATAAGA CTTGGTC             AATAATGCATAAATC  95 203
HCN55_RS11330 NONE
HCN55_RS11325 NONE
HCN55_RS11320 2206038 .. 2206057 -  -6.5  -4.72272   GTGTGGCATGAAAAA            GAGCATT TAGTGT AATGCTC             TTTTTGTTTAAAACA  80 352
HCN55_RS11305 NONE
HCN55_RS11300 NONE
HCN55_RS11295 NONE
HCN55_RS11290 2204579 .. 2204590 -    -3  -2.62263   ATTTCTCCTATATTA                TTCA AATT TGAA                 TATTTCCTTTCTGTA  41 45
HCN55_RS11285 NONE
HCN55_RS11280 2203586 .. 2203611 -   -12  -2.92246   CCAATTTTAACTAGA         CACAATGAGG ACTAAA CCTCATTGTG          TTCTTCTAAAGCAAA  84 46
HCN55_RS11275 NONE
HCN55_RS11270 2202062 .. 2202089 - -12.8  -4.67635   CTTAAAACTACAAAA        GACGCTTAGCTC AAAA GAGCCAAACGTC         TTCCTTTTCTCTGTT 100 92
HCN55_RS11265 NONE
HCN55_RS11260 NONE
HCN55_RS11255 NONE
HCN55_RS11250 2199915 .. 2199927 -  -4.1  -2.90349   TTGCTAAATTTAAAG                TTACC AAA GGCAA                TCTGGTTAATCAAGA  46 81
HCN55_RS11245 NONE
HCN55_RS11240 2197458 .. 2197484 -  -9.6  -5.58522   GAGATAAAAGAAAAA         TCCATTTAACCA AAA TAGTCAAATGGA         TTTCATATTTAAATG 100 34
HCN55_RS11230 NONE
HCN55_RS11225 2196380 .. 2196406 -  -8.8  -2.72227   AATATCTGTCAATTA         GATTCGGCCA ATTTATG TGACCGAATC         TAATTTTAATCTGAG  68 31
HCN55_RS11220 NONE
HCN55_RS11215 NONE
HCN55_RS11210 NONE
HCN55_RS11205 NONE
HCN55_RS11200 NONE
HCN55_RS11195 NONE
HCN55_RS11190 NONE
HCN55_RS11185 NONE
HCN55_RS11180 NONE
HCN55_RS11175 NONE
HCN55_RS11170 NONE
HCN55_RS11165 NONE
HCN55_RS11160 NONE
HCN55_RS11155 NONE
HCN55_RS11150 NONE
HCN55_RS11145 NONE
HCN55_RS11140 2189239 .. 2189269 -  -2.6  -4.56597   TGCCTTCTTTAAAAA       CCATATAATGTAAT TGC AATACATTAAAAGG       AAATGGAGATGGTTC  62 446
HCN55_RS11130 NONE
HCN55_RS11120 NONE
HCN55_RS11115 NONE
HCN55_RS11110 2187230 .. 2187242 -  -4.1  -3.87583   AAATCGAAATCTAAA                CAGAA TTA TCCTG                ATCACTTCGAAGAAA  57 137
HCN55_RS11100 2186345 .. 2186361 -  -3.7  -3.48064   TGCAGAACGAACTAA              GTTCCAC TCT ATGAAAC              AAGTTAAGTCTGAAT  52 213
HCN55_RS11085 NONE
HCN55_RS11080 NONE
        pghZ 2183260 .. 2183281 -  -3.7  -3.68569   GGATTTATTCAACAA           TGTCATGGTG CTA CACCA-GCCA           TACAATACACATTTT  54 6
HCN55_RS11070 2181477 .. 2181492 -  -3.2  -4.06781   ACCAAAACCCATAAA              GGGAAC AAGT GTTCTC               GTTAAGAATTTTTTA  57 38
HCN55_RS11065 2181086 .. 2181112 - -12.4  -3.41051   TTATTCGTATGATAA         CTAGGCTAATCT TAG AGACTAGCCCAG         CATTGCCTTATAAAT  89 33
HCN55_RS11060 2180666 .. 2180682 -  -2.3  -3.45231   TTATATAGGTAAAGA              GTTTG CTATTTT CAAAC              AAGCTCACTCCACAA  45 20
HCN55_RS11055 2180266 .. 2180280 -  -4.9  -4.36595   TATTTAAATTTAAAA               GCCCC AATAA GGGAC               TCTTGTTAGTTTGTT  68 31
HCN55_RS11050 NONE
HCN55_RS11045 NONE
HCN55_RS11040 2177727 .. 2177748 - -13.1  -2.78073   ATCACTCCTAATAAG           GAGGAGAGA ATAA TCTCTCCTC            TTTTATTCTGCTAGA  90 28
HCN55_RS11035 2177246 .. 2177257 -    -3  -2.62184   CTCCTTCCTATAGCA                TTGA GATA TCAA                 CTAGCCCTCTTTTCT  41 6
HCN55_RS11030 2175695 .. 2175707 -  -6.9  -3.64599   TTATCATACTTCAAA                GGGCG CTA CACCC                CTCATCCTGCTTTTA  67 27
HCN55_RS11025 NONE
        recJ NONE
HCN55_RS11015 NONE
HCN55_RS11010 NONE
HCN55_RS11005 NONE
HCN55_RS11000 NONE
HCN55_RS10995 NONE
HCN55_RS10990 2167248 .. 2167260 -  -3.5  -3.65812   GCCCCTCCAAGATAA                TTAAT GTC ATTAA                TCCTCCACCTTCCTT  52 22
HCN55_RS10985 NONE
HCN55_RS10980 NONE
HCN55_RS10975 2166051 .. 2166073 -  -2.2  -2.90486   AACAACCTCCATATA           TTTTATTT TTACTCT AAATAAAA           TTGATCTTTTATTTT  41 34
         dcm NONE
HCN55_RS10965 NONE
HCN55_RS10960 2164080 .. 2164090 -    -4  -3.43651   AAACAATTTAATGAA                 TCAA GCC TTGA                 TATGTATTTGGTTTA  50 7
HCN55_RS10955 NONE
HCN55_RS10950 NONE
HCN55_RS10945 2163275 .. 2163296 -  -9.5  -2.87132   TCCCTGTTCGATAGA           CGCCATAAA ACTT CTTATGGCG            TTTTTTATTTTTACA  73 60
HCN55_RS10935 NONE
HCN55_RS10930 NONE
HCN55_RS10925 NONE
HCN55_RS10920 NONE
HCN55_RS10915 2161268 .. 2161278 -  -2.6  -4.08064   AATTTCGGCTTAAAA                 TAAA ACT TTTA                 TTTAGACTTATTGTC  55 23
HCN55_RS10910 NONE
HCN55_RS10905 NONE
HCN55_RS10900 NONE
HCN55_RS10895 NONE
HCN55_RS10890 NONE
HCN55_RS10885 NONE
        nrdI NONE
HCN55_RS10875 2157957 .. 2157973 -  -2.9  -3.70149   TGCAGACCATTCAAA              CGTGTTC GCT AAGCACG              TCCCGCCATATGGCT  50 245
HCN55_RS10870 2155106 .. 2155122 -  -5.3  -3.46068   CTTTCAATTGAAATA              TTTTTTT CCG AAAAAAA              TGCAGTGAATTTAAA  57 312
HCN55_RS10860 2153809 .. 2153822 -  -2.3  -3.05384   CCCGTTTCGATTTAA               GGGGT TCTC ACCCA                CGCCAATAGCTTGCG  42 69
HCN55_RS10850 NONE
HCN55_RS10845 2152510 .. 2152526 -  -3.1  -2.80922   AAAAAGGTAATATGA              TTAAAAA TGT TTTTCAA              GATGACTTTTAAAAT  44 68
HCN55_RS10840 2152000 .. 2152023 -  -8.1  -3.08465   ACTTATACATATATA          GGAGGTGGG AAATTA CCCACCTTC           TTTATTGGATAGGAA  67 27
HCN55_RS10830 NONE
HCN55_RS10825 NONE
HCN55_RS10820 2150640 .. 2150656 -  -4.5  -3.84185   TGCAGCTAAACACAA              TTTCACA TTA TATGAAA              AATAATACTCAAAGC  59 11
HCN55_RS10815 2149763 .. 2149783 -  -5.3  -2.57092   AATTTCATTAATTTA            TGAGGGGGA TAA TTCCCCTCT            CTTTTTTAAGTCTTC  51 300
HCN55_RS10805 NONE
HCN55_RS10800 NONE
HCN55_RS10795 NONE
HCN55_RS10790 NONE
HCN55_RS10785 NONE
HCN55_RS10780 NONE
HCN55_RS10775 2147372 .. 2147386 -  -5.8  -4.59773   CTGTATCTTTAAAAA               TTTCAA TCA TTGAAA               TAATCCTCCCCAAAT  76 17
HCN55_RS10770 2146968 .. 2146990 -  -2.2  -3.16668   TAATACCTCCACTAA           TTTTATTT TTATTCT AAATAAAA           GACCGATTTTATCCT  43 54
HCN55_RS10765 NONE
HCN55_RS10760 2146237 .. 2146252 -  -2.6   -5.1287   TGCATAGTGAAAAAA              CAA-TGG AAA CCAGTTG              ATTCAAGACTCAATG  73 245
HCN55_RS10750 NONE
        sprB 2144951 .. 2144984 -  -4.1  -3.57908   CAGCAAACAGCAGAA     CTAAAACCATTTT TCCATAAC AAAACAGTTTTAG      TCACTGGCGGAACGG  53 428
HCN55_RS10735 2143384 .. 2143400 -    -8  -5.38047   TATTCATAGAAAAAA              GCAGCT GCACA AGCTGC              TTTCTATTCTAGCCG  95 34
        cgeC 2141434 .. 2141456 -  -6.9  -5.19879   CGTCAAACATAAAAA           CGGCTCCGC AGCAA GCAGAGCCT           CTGTCATCATTTAAA  90 36
        cgeD NONE
        cgeE NONE
        yoyG NONE
HCN55_RS10700 NONE
HCN55_RS10695 NONE
HCN55_RS10690 NONE
HCN55_RS10685 NONE
HCN55_RS10680 NONE
        ablB 2134159 .. 2134175 -  -2.3  -2.62184   TTTCGGTTTATACCA              TTTGTTT TTC AAACGAA              CTCCTCCTCGCGCAT  40 49
        ablA NONE
HCN55_RS10665 2132476 .. 2132492 -    -3  -3.48144   AAGAATACTGAAACA              TGACTC AGGAG AAGTCA              AAATAGTTGCGTTTC  48 13
HCN55_RS10660 2132140 .. 2132157 - -11.3  -5.72616   ATGGACATAAAAAAA             TCCGCAG TGAT CTGCGGA              TGAAACAGCTATTAT 100 37
HCN55_RS10655 NONE
HCN55_RS10645 2130870 .. 2130898 - -16.2  -3.84873   ATAGAACATGAATAA        TAAAACCGGAGC TGACC GCTCCGGTTTTA        AGCCTCACTCATCTT 100 30
        pgpB NONE
        yodL 2129812 .. 2129827 - -10.4  -4.46581   TAAAACTGCAGAAAA              CTGCGG GTTT CCGCAG               TTTTCTTTTCATTAT  95 37
        deoD 2128735 .. 2128760 - -11.9  -4.09117   CGCATGCATAAAGAA         GAGGC-TGCCGG CAC CCAGCACGCCTC         TTGATATATTTTATT  93 36
        ldcB 2127834 .. 2127858 - -11.5  -3.52717   ACCAGACACAATGAA          GCCCGCTTA TCTAGTG TAAGCGGGC          TTTTCATTTTAAATT  87 34
HCN55_RS10605 2125174 .. 2125196 - -17.8  -5.60993   GGGCGCATAAAAAAA           CCATACGCGG CAG CCGCGTATGG           TTTTTTTTACATTTC 100 32
HCN55_RS10590 NONE
HCN55_RS10585 2121735 .. 2121759 - -15.1  -4.84274   TAAGGATATGAAAAA          CCTTAGTCCGA AAT CCGGACTAAGG          TTTTTTTATACAATC 100 31
        yodB 2120264 .. 2120294 - -13.4  -5.93809   TCCCCACAAAAAAAA       GAAGAGAGAGCTCC AAA GAAGCTCTCTCTTT       TTTCATAAATGCGGA 100 377
HCN55_RS10565 NONE
HCN55_RS10560 2117800 .. 2117822 - -14.9  -5.26316   TCATCCGATAAAAAA           CGGCCTGCA ATCGA TGCAGGCCG           TTTTTTATTAATAGA 100 33
        rarD 2116323 .. 2116345 -  -3.4  -3.93061   AGCTGAAAAGCCAAA           GGCCTCAA TGGCTTT TTGACGCC           CGTTTCCACTTCACT  55 7
HCN55_RS10545 NONE
HCN55_RS10540 NONE
       bshB2 2114910 .. 2114934 -   -13  -5.46698   CTTAAAATTAAAAAA          GGTATAAGGC TTAAG GCCTTATACC          TTTTTGATTAATCAT 100 33
HCN55_RS10520 2111713 .. 2111734 -  -8.1   -5.0916   TCTTCAAGACAAAAA           GCATTCAGCT TGA AGC-GAATGC           TTTAATAAAGATGCG 100 96
HCN55_RS10515 2110320 .. 2110344 -   -13  -4.71482   ATGAAATGGCAAAAA          GCCTGTTCTT TCGAT AAGAACAGGC          TTTTACACTATGCAT 100 33
HCN55_RS10510 2108695 .. 2108707 -  -4.8  -5.72622   GGTATAAACAAAAAA                GCCT ATAAA AGGC                TTTTTGTCATACTCA  88 44
HCN55_RS10505 NONE
HCN55_RS10500 2107074 .. 2107084 -  -5.4  -3.64703   GCCCCCTCATTCAAA                 CAGA GTT TCTG                 CAATATTTCGGACAG  60 6
HCN55_RS10495 2105123 .. 2105148 -  -7.7   -4.7339   AACAAACGCCAAAAA         GCATAGGAT TAAGGGCT ATCCTATGC          TTTTATGAAGCAGTT  88 15
        sucA NONE
        odhB 2100771 .. 2100798 - -14.3  -4.76644   AATATGCATCAAAAA        GGGTACATCAC TTTATC GTGATGTACCC         TTTTTTATTATCCTT 100 33
HCN55_RS10475 2098208 .. 2098226 -  -8.8  -5.52384   GCTCTATTAAAAAAA             GCCCCC TTTCCTC GGGGGC             TTCGTGTGTTAAAAA 100 34
HCN55_RS10455 2093379 .. 2093395 - -13.7  -5.71983   TTAACCACAAAAAAA              CCGCAGC TGA GCTGCGG              TTTTATGTATCGACT 100 78
HCN55_RS10450 2092665 .. 2092688 - -12.5  -3.61517   AGTGTGGTGTAATAA          GAACAGGGC GCACAT GCCCTGTTC           TTGTTTTTATATATA  95 84
HCN55_RS10435 NONE
HCN55_RS10425 NONE
HCN55_RS10420 2090389 .. 2090417 -  -8.9  -5.75342   TTTTTTCAAAAAAAA        GCAAGTACATCTA ATA TCGGTGTACTTGC        TTGGCATTTTTACTT 100 35
HCN55_RS10415 2089554 .. 2089575 -  -2.3  -6.17268   TTACAATAAAAAAAA           TAGCCTTTA TTGC TAAAAGCGA            ATGATTATTTTCTTC  95 100
        ssrS 2089206 .. 2089228 - -12.1  -5.58522   TAGATAAAATAAAAA           GCCATTTCC GAAAA GGAAATGGC           TTTCGCTACGTCTTG 100 24
        recQ NONE
HCN55_RS10400 2086156 .. 2086178 -  -9.2  -5.89921   AGCAGAACAAAAAAA           GACACAAGCC AAA AGCTTATGTC           TTTTATCACAATCTA 100 46
HCN55_RS10370 2080011 .. 2080034 - -14.6  -3.66139   TAGACACACTTCAAA          GGCCGGAGGCT ATT AGCC-CCGGCC          TGTTAGGTTTACGCC 100 34
HCN55_RS10365 2079351 .. 2079367 - -10.9  -5.50499   TTACACGTAAAAAAA              GCCATAC TGA GTATGGC              TTTTAATAATACGGT 100 28
        czrA 2078042 .. 2078081 -  -4.4  -5.50774   TACAATAAAGAAAAA  GACATCCTTGCCC-GCT AACAGCG AGTTAAGCAAGGATGTC  TTTTTCAATCATGCT  84 30
HCN55_RS10345 2076348 .. 2076375 - -12.9  -4.16904   AAGATTATAGACAAA        GAAACCTGACA GCAGTG TGTCAGGTTTC         ATATATTTTTTGCAT  95 17
HCN55_RS10340 2075778 .. 2075815 - -14.5  -5.06414   TCCTCCTAACAAAAA   CTAATGGTGTTAGTT TTATTATT AACTAACACCATTAG    TTTTTCAAGAGTTTA 100 41
HCN55_RS10335 NONE
HCN55_RS10330 NONE
HCN55_RS10325 NONE
HCN55_RS10320 2072892 .. 2072906 -  -2.9  -2.63455   GGAGATATACAATAT               TCTTT TAACT AAAGA               GCCATCATTTTTTAT  41 30
        csaA 2072481 .. 2072503 - -16.4  -3.76373   GCCTCAATACGCAAA           GACGTTTGCC TTA GGCAAACGTC           TTTTTTTGCGTTATC 100 36
HCN55_RS10300 2066925 .. 2066943 -  -9.6   -5.2015   TGAATAACAGAAAAA             GACAGCCA AAA TGACTGTC             TTATACATCACACAC 100 40
        yobL NONE
        yobK 2064497 .. 2064529 - -15.9  -3.19936   AATTATTTAATCCAA      TAAAATAAGCTCTCA TTG CGAGAGCTTATTTTA      TTTAGATTGAGGATG 100 82
HCN55_RS10285 2063032 .. 2063052 - -10.5  -5.48063   ATTGAATACAAAAAA            GAACCTGCA TTT TGCAAGTTC            CTTTCACGTTGTCAA 100 517
HCN55_RS10275 2062310 .. 2062335 -  -4.2  -2.94137   AACCACTGCACAAAT         TTTTTTTTGA TTTCCC CCAAAAAAAA          CAAATCCTTTCTAAA  50 252
HCN55_RS10270 2058591 .. 2058603 -  -3.5  -4.90013   GAAGCCAAGGAAAAA                TATAA GAT TTATA                TATTCAAGGATGATA  72 146
HCN55_RS10260 2057538 .. 2057558 -  -6.9  -3.15249   CACATTTTTCAGGAA            CAAATCTGT AAA ACAGCTTTG            TAATCTCAGTTGAAA  63 307
HCN55_RS10230 2053337 .. 2053356 -    -5  -2.91593   GATCTTTTTACAAAT            TGGACTTT TGAT AAAGTCCT             GGATTATACACTAGC  50 204
HCN55_RS10220 2052937 .. 2052948 -  -2.2  -2.54059   TATATACACTAACAT                CACC TCCG GGTA                 GATAAGTTAACCTTA  40 66
HCN55_RS10215 2051785 .. 2051823 -  -9.8  -2.87683   ATATCGCTTTATATA  CCACCTCCT-CTTAG CTAATATGTT CTAAGTAGGAGGTGG   TATTTTGTTTGTATC  75 215
HCN55_RS10200 2049919 .. 2049932 -  -8.1  -5.39221   ACAACAATTAAAAAA               GCCCT CATA AGGGC                TTTTGCATAAAACAA 100 41
HCN55_RS10190 2048675 .. 2048699 - -11.7  -4.51363   GAGCAAATATTAAAA          GTATTTGTAAT TCA ATTACAAATAC          CTAGAAACACATTAT  95 492
        xynA 2047375 .. 2047399 -  -9.4   -5.0916   TGTGCAATATAAAAA         GAACCTGG-GA AATT TCACCAGGTTC          TTTTCTTAATTTCCA 100 523
        ppsA 2044260 .. 2044275 -    -9  -4.02132   GTTTAAACTTATAAA              GGAGCT TTTT AGCTCC               TTTTTCTCTTGTTTT  81 377
HCN55_RS10170 2043653 .. 2043663 -  -3.2  -3.80831   TTAAAATAAACAACA                 GGAT ATC ACCC                 AACCCATCTACTTCT  52 33
HCN55_RS10165 2043199 .. 2043210 -  -4.4  -3.71686   TTCAATGCAATAGAA                CAAC ATTT GTTG                 TCTCAGAGGTTATCT  57 63
HCN55_RS10150 2040926 .. 2040947 -  -6.6   -5.4492   GACACATATAAAAAA           TGCTCCTA TAAGTT CAGGAGCA            CTACAAAAAACTGCT  93 51
HCN55_RS10145 2040210 .. 2040235 - -10.6   -5.4148   TAAACAATGAAAAAA         GCTAATGTCT GCATGT AGACATTAGC          TTGGCTGGCGTTTAG 100 68
HCN55_RS10135 2037989 .. 2038005 -  -2.2  -3.05011   ATATCCAAACCAAAT              CGATAC ATGGA GTCTCG              TACACCTTGGAAAGG  42 274
HCN55_RS10115 NONE
HCN55_RS10110 2034521 .. 2034531 -  -5.4  -2.94199   TAGTCATTAATCACA                 GTCA CTT TGAC                 ATTTGACTCAGCTAT  53 122
HCN55_RS10105 2034013 .. 2034029 -  -2.3  -4.03413   ATTTGCGGATACAAA              GGATT AATTCAA AATCC              TTTGTATAAAGGCGA  55 282
HCN55_RS10095 NONE
HCN55_RS10090 NONE
HCN55_RS10085 2032164 .. 2032183 -  -8.6  -5.63517   TCCGCAAATAAAAAA            GTGACCAC CAAT GTGATCAC             AAATACATCAAATAA 100 42
        oxdD 2030796 .. 2030818 -  -7.1  -4.98857   ATTCAAGCAGAAAAA           CCCTACATA ACGTA TATATAGGG           ATTTAATAAAACACA  85 106
HCN55_RS10075 2029864 .. 2029879 -  -2.5  -4.32034   CCATGATCATGAAAA              GGAGT GGCTTA ACCCC               AAAAATACAAGCCCT  60 507
HCN55_RS10060 2027157 .. 2027171 -  -7.1  -4.17109   AATAACGAAATGAAA               CAGGC TGTTG GCCTG               ATAACAGCTATACAG  73 47
        exlX 2026194 .. 2026213 -  -6.4  -5.17054   AGAACATTGAAAAAA            CAGCGG GAAAAGAT CCGCTG             TTTCGTATTTTTTAT  86 37
HCN55_RS10045 2022678 .. 2022713 -    -7  -4.39889   ACAACCACAGTAAAA   GTAGCCAACCCCCACC GAATAA GATGGGGGTTG-C-AC    GTAAGTAGCCTGTTT  79 39
HCN55_RS10030 NONE
HCN55_RS10025 2021107 .. 2021145 -  -8.8  -4.87892   GGTGAATAAAACAAA   TCTGAGGAGAGCGAGA TTCATTG TCACGCTCTCCTCTGT   TTAGCTGTATGGATC 100 353
HCN55_RS10010 NONE
HCN55_RS10005 2015846 .. 2015856 -  -3.2  -2.78508   GATTCCTCAAAACAG                 CAGA AAT TCCG                 TCTTAAATTAATACT  44 28
HCN55_RS10000 2014494 .. 2014513 -  -8.5  -5.36364   TTAAAAAGATAAAAA            GCGCCCC TCAAAC AGGGCGC             TTTCTAATTAAGATG 100 33
HCN55_RS09980 2011827 .. 2011842 -    -9  -5.96894   ATTCAAATAAAAAAA              CCTGTC GAAA GACAGG               TTTTCATTTTTAAGG 100 35
         rtp 2011146 .. 2011173 -  -6.9  -4.68539   ATGAAAAGCAGAAAA        CACCCGGTTCA CACTGC TGCGCCGGGTG         TTTGTTTCTATTAAA  81 36
        proC NONE
        proB 2008986 .. 2009020 -  -6.5  -6.13503   TATCAATAAAAAAAA    TGAACCCGA-GCTTCT ATAT AGAAGCTTCGGGTTTT     TTTCTGCAAATTAAT 100 36
        gltB NONE
        gltD 2001819 .. 2001846 -   -15  -5.83226   AATGGAATAAAAAAA        GAAACCGG-CTGG CAG CCAGACCGGTTTC        TCTTATATGATAATC 100 49
        yofA 1999747 .. 1999771 -  -7.9  -5.85425   TAAATAAATAAAAAA          CTGTACTCGCT TCA AATGAGTACAG          TTTTTTCATGCAGAT 100 93
HCN55_RS09930 1997539 .. 1997559 - -11.3  -5.82281   AAATATACAAAAAAA            GACACAATT TCA AATTGTGTC            CTAATCCTCATCCTT 100 26
HCN55_RS09925 NONE
HCN55_RS09920 1996532 .. 1996558 - -12.4  -4.55295   GTTTGCATAAAGAAA         GACAACAGGC GAAAAGT GCCTGTTGTC         TTTTTGTGAATATAA 100 39
HCN55_RS09910 1994223 .. 1994246 - -11.1  -5.99154   TATCAAATAAAAAAA          CACCGTTCA AACTTA TGAACGGTG           TGATTCGGAGGCTAT 100 37
HCN55_RS09905 NONE
        dacB 1991605 .. 1991627 - -10.7  -5.77988   ACAGACATAAAAAAA           CCTGTTTTC TCTTG GAAAACAGG           TCTCCCGCTATTATT 100 36
        ppsA 1983575 .. 1983590 -  -3.3  -3.92659   TTTTCAAAAGTTAAA              GATCT TTCACG AGATC               TTCGATGCTAGATAA  55 5
        ppsB NONE
        ppsC NONE
        ppsD 1957353 .. 1957365 -  -3.4  -4.21462   ATTCATTAGTGAAAA                CTGA GCATA TCAG                CGATCTCTTGCAGGG  59 3
        ppsE 1953460 .. 1953486 -  -9.5  -5.01422   TGATACAAAAAGAAA        GACGGACAGAGA ATGG CCTCTGTCCG-C         TAATCCGCTTTATCG 100 35
HCN55_RS09870 1952967 .. 1952999 -  -5.8  -5.48163   AAATAAACGAAAAAA     GTCCT-AAAGCATGTT GTG AAC-CGCTTTTAGGAC     TTTTTATCATTCATC  91 19
HCN55_RS09865 1951295 .. 1951313 -  -9.6  -5.41143   CACTTTTTAAAAAAA             GACGACTT AGA AAGCCGTC             CTTCTCATTTCTTAT 100 37
HCN55_RS09860 NONE
HCN55_RS09855 NONE
HCN55_RS09850 NONE
HCN55_RS09845 NONE
HCN55_RS09840 NONE
HCN55_RS09835 NONE
HCN55_RS09830 NONE
HCN55_RS09825 NONE
HCN55_RS09820 1942946 .. 1942966 -  -9.7  -4.27886   TTGTAAATATATAAA            GGAGCGC TTTTTTT GCGCTCC            TAAGTTCTTGCTTTT  86 39
        nrnB 1941239 .. 1941250 -    -3  -2.56601   TTGATTAAAAAGCAT                CATA TCGA TATG                 TCGGAAAACTGGTTT  40 386
        xynD NONE
        xynC 1935948 .. 1935971 - -11.8  -5.92399   CAACAAAATAAAAAA          GCGATTTCCC AATC GGAAAATCGC           CAATTCAGACACTCT 100 66
HCN55_RS09770 1931170 .. 1931192 - -16.4  -5.70522   AACAATAATAAAAAA           CCCGCTCATA CTA TATGAGCGGG           TTTCGTTTGATTTTT 100 193
        plsY 1925131 .. 1925146 -  -3.3  -3.26722   GTCATATTCATAACA              GAACA CCCCTT TGTTC               TTCATTTGAATTTTC  47 93
HCN55_RS09745 1924814 .. 1924834 - -11.2  -5.42259   TCATTTGTAAAAAAA            GAACGCAC ATGAA GTGCGTTC            TTTTTTATTGGTATT 100 30
        sspO 1919580 .. 1919592 -  -4.1   -2.8272   TCATAAAATGAGAAC                CTCCT TAA AAGAG                TTCGGTGTTATTGAT  46 33
HCN55_RS09700 1919400 .. 1919415 -  -4.7  -5.66684   GAACGCATAAAAAAA              CAGAC ACTAAG GTCTG               CTTTTCTTACATATC  88 32
        cotM 1918910 .. 1918939 -  -9.5  -5.47821   ATGGACGGAAAAAAA       GTCACTTTCAT AATAGGGG ATGAAAGTGAC        TTTTTATGTTTAGCT 100 35
HCN55_RS09690 1918261 .. 1918282 -  -8.8  -5.33921   AAATGAATTAAAAAA           CCTTTCCT CTTGTC AGGAAAGG            TTTTTTATTTGAGAA 100 30
        ynzD 1916101 .. 1916126 -  -9.2  -4.39828   AACATGGTTATAAAA         TAAAAAACCC TTATAC GGGTTTTTTA          TTTTGCAATCATTCA  91 34
        lexA 1910878 .. 1910903 - -12.6  -4.44667   TTTTTGAACAACAAA         CCCCCTCTCC GTAAAG GAAGAGGGGG          TTATTTTATGCATCT 100 55
HCN55_RS09625 1909278 .. 1909302 -  -9.3  -4.67755   ATAGCTACTGAAAAA          TAGGAGGCGAT AAG ACAGCCTCCTA          TTCCTTATGCTTCTC  91 23
HCN55_RS09575 1899539 .. 1899568 - -11.7  -5.40474   ACCCTTGGAAAAAAA       CAAAAAAGAGAGA TACC TCTCTCTTTTTTA        TTCTTCGACAGCCTT 100 23
        cotC 1898242 .. 1898257 - -11.8  -4.49311   CACAAACAAAAAAGA              CCCGGC AATA GCCGGG               GGAAAGTAAAAACGA  95 58
HCN55_RS09550 1897680 .. 1897695 -  -3.3  -3.86202   CTTTATCAGAGGAAA              GAATG AGATCA CATTC               GTTTTAACCGATTTG  55 18
HCN55_RS09545 1896770 .. 1896789 - -10.7  -4.41047   ATGCTCCAAGGAAAA            CCGCCAG ACAATG CTGGCGG             CTTTTTGCTGCTTCG  95 42
HCN55_RS09540 1896462 .. 1896481 -    -8  -5.48787   ATAATACATAAAAAA            GATTAACT CTAC AGTTAATC             TTTTTTATTCAGAAG 100 20
        cotU 1894192 .. 1894211 -  -3.6  -4.00042   TTGTCGATGAAACAA            GCATCTCT ATAA AGAAATAC             TTTTATCTAAATTTT  56 226
         alr 1891189 .. 1891215 - -16.8    -5.252   TAGTTTCAGAAAAAA         CAAAATCCCTCT GGT AGAGGGATTTTG         ATTCAGCATTTTAAG 100 46
        yncB 1888492 .. 1888513 -  -8.7  -4.21954   TTAACACACAAATAA           CCCCTCACA TTGA CGTGAAGGG            GTGTTTTTTATTGTT  83 185
HCN55_RS09480 1883770 .. 1883787 -  -8.5  -5.88565   CCTAGAATAAAAAAA             CTCATCT TTAA AGATGAG              CTGTCCATTCCATAA 100 45
        cwlC 1866049 .. 1866075 -  -7.9   -5.7946   TCTTGAATAAAAAAA         CCCGGTTTCTC GCGAT GAGGAGCCGGG         TTTTTTTATGAGACG 100 57
HCN55_RS09330 1858780 .. 1858798 - -13.2  -4.72846   TCACACACTTAAAAA             GACCCCTT TTT AAGGGGTC             TTTTGCGTTTAATAA 100 34
        ebrA NONE
        ebrB 1857979 .. 1858003 -  -7.1  -5.14682   GGAGAATAAAGAAAA          CAGACGGTC ACTCACA GGCCGTCTG          TTTTTTATCTTCAGC  90 8
        aprX 1854636 .. 1854665 - -10.1  -5.38497   ATTCAAACGAAAAAA       CCGGCAGTTCTGCT GAG AG-AGAATTGCCGG       CTTTTGATGATGTTT 100 39
HCN55_RS09300 NONE
HCN55_RS09295 1853248 .. 1853281 - -18.3  -4.03413   ACGGCTCGATATAAA     GCAGCGCCTTTGAAC GAAA GCTCAAAGGCGCTAC      GCTGTATTATTTTGA 100 53
HCN55_RS09290 1851828 .. 1851851 - -14.6  -4.51238   CTGAGAAAACACAAA          CGCCCCCTCT TTTA AAAGGGGGCG           TTTTGAATGTTATTT 100 35
HCN55_RS09205 1774487 .. 1774510 - -12.4  -5.52347   AACAAAACCAAAAAA          GGCCCTTTCC ACTG GGGAAGGGCC           TTTTTCATCATGTTA 100 38
HCN55_RS09200 1773399 .. 1773424 -  -6.2  -4.12225   AACGACGAAATCAAA         GCGCTTCTGGA CGACC TCC-GAAGCAC         ATCAGACCCATTTAC  68 514
HCN55_RS08655 1664432 .. 1664451 - -13.6  -5.15167   GACGATTAAGAAAAA            GGCCCCAA CATC TTGGGGCC             TTTTTCTTTTTTATC 100 36
HCN55_RS08585 1648861 .. 1648885 - -13.5  -5.00895   TTCACCACATAAAAA          CGCCTGCCACA TAT CGGGGCAGGCG          TTCATTTTGTTATAC 100 35
HCN55_RS08495 1629385 .. 1629414 - -13.7   -4.7458   ATGAGAAGAAAGAAA       TAAGCCAGAGCAT ACAA ATGCTCTGGCTTT        TCTTTATGCGGCTCA 100 38
HCN55_RS08225 1569602 .. 1569620 -  -3.1   -4.4009   TCGTATGTGAGAAAA             CAATACC AGTCA GGTATAG             AGCTTGCAAAAAAGC  62 468
HCN55_RS08205 NONE
HCN55_RS08200 1567079 .. 1567097 - -13.2  -4.35926   AGCTGAAAGCGAAAA             GCACCTGA TTC TCAGGTGC             TTTTTCTATACATTT 100 31
       spoVV 1563854 .. 1563875 -  -5.9  -3.61591   CAAAAATTCAGACAA           GGATGAG GGTTTTGA CTCATCC            TTTTTTTGTTCCGTT  61 20
HCN55_RS08140 1558614 .. 1558636 -  -9.2  -4.52047   GACGATATCATAAAA           GGTACAGC GAAATAT GCTGTACC           TTTTCGTTACATTTG  91 32
        ctaA 1551296 .. 1551321 - -13.4  -5.48787   ACAAGACATAAAAAA         GACCAAAGCC GCCTAA GGCTTTGGTC          TTGAGTCCTTATGAT 100 34
HCN55_RS08080 1544043 .. 1544063 -  -2.5  -4.11484   GTGAAGCTGTTAAAA            GGTGAGA GATCAGG TCTCGCC            CAGCTTGCAGCTGAT  55 53
HCN55_RS08070 1541954 .. 1541974 -  -5.4   -5.4593   CCAAAATAAGAAAAA            GCTAAAGC GCAAG GCTATAGC            TTAGTCATTGTTGTT  88 26
HCN55_RS08065 1541623 .. 1541657 - -17.4  -3.06073   GACAGTCTGCAAAAT     CATAAAAGACTCAGCT GAA AGCTGAGTCTTTTTTG     TGTTCTGTATGGTTA 100 51
HCN55_RS08050 1539059 .. 1539077 -  -7.4  -5.13137   TAAAGAAATGAAAAA             CACCGC TTTCTTT GCGGTG             TTTTTTGATTACAAT  90 62
HCN55_RS08045 1538196 .. 1538220 - -12.2  -5.71712   GCTGATATAAAAAAA         GCGCTTGTCCG ATTC CGG-CAAGCGC          TTTTTTACATTAAGC 100 35
        nprE 1533301 .. 1533318 - -11.3  -4.91084   TATGTAACAATAAAA             GCCTGAG GGAT CTCAGGC              TTTTCCTAATATTAC 100 37
HCN55_RS08015 1532026 .. 1532046 - -14.1  -5.06414   CGGGTTCAATAAAAA            GCCTCTCAA ACA TTGAGAGGC            TTCTGATGATTTGAA 100 43
HCN55_RS07995 1529501 .. 1529522 -   -13  -5.12971   AAGATGTAAGAAAAA           GAGCCGGG GGATAT CCCGGCTC            TTTTTTATGCTTGTG 100 30
        speA 1527537 .. 1527559 - -17.8  -6.43839   AGAGTAAAAAAAAAA           GCATGCGGCT TAA AGCCGCATGC           TTTTTATTTTTTTAT 100 37
HCN55_RS07975 1526587 .. 1526610 - -13.2   -4.8048   TTTTCATATCAAAAA          CAGCCC-CGCT TTG AGCGAGGGCTG          TTTTTTTATTTTGAC 100 31
HCN55_RS07945 1520108 .. 1520131 - -12.5  -3.61468   GTGCAACGAAACGAA          TGACCAGCC GTATAT GGCTGGTCA           ATTTCATGCTGTGTG  95 42
HCN55_RS07940 1519454 .. 1519474 - -16.9   -4.8743   TTTAAAATAAAGAAA            CGGCTGGCA TTG TGCCAGCCG            TTTTCTCTTTTAGCG 100 35
       rnpZA NONE
HCN55_RS07925 1516374 .. 1516398 - -20.1  -5.46657   CACTGCAATAAAAAA          GAGGCACTCCC TTA GGGAGTGCCTC          TTTTTTTTTTAAACC 100 34
       mreBH 1509819 .. 1509831 -  -3.4  -4.67552   GTGAGGAAAAAAGAA                GCAA GAAAT TTGC                CGCGTGTGAGAATTT  64 53
HCN55_RS07890 1509592 .. 1509612 - -11.9  -4.81249   GCCCAAAGTGAAAAA            CCCAAAACG ACA CGTCTTGGG            TTTTTTCAATATTAT 100 37
HCN55_RS07885 1508246 .. 1508280 -  -9.6  -4.99861   TATGAAGCAGAAAAA    TAAA-AAAAGGAGGC GGAAAA GCCTCCTTTTATTTA     CTTAAAAAGCCCAAT 100 27
HCN55_RS07870 1505167 .. 1505215 -   -20  -3.59627   ACGAAATGCGTCAAA CAAAATAAAAACGCCTTGCTGGC CTAG GACAGCA-GGCGTTTTTATTTTG AAAAAGAAGCGACCA 100 18
HCN55_RS07785 1487661 .. 1487682 -  -9.5  -5.48623   AAATATAAAGAAAAA           CTGCTTG-GC ATC GCTCAAGCAG           TTTTTTTATTGAGGT 100 31
        mscT 1484470 .. 1484504 - -15.3  -3.23979   AGCAGAATTCAGTAA     TAAAAAAACCGAAGC AAAAA GCTTCGGTTCTTTTA     TTTATTCTGTTTCTT 100 27
HCN55_RS07680 NONE
HCN55_RS07675 NONE
HCN55_RS07670 1468394 .. 1468421 - -12.2  -4.75174   TATTGAATGTAAAAA        TGCGCTTTTTTC TAAG AAAAAAAGCGCA         TTTTTAACCTGCATT 100 39
HCN55_RS07665 1467799 .. 1467846 - -13.8  -3.06915   ACGTATGTTATTGAA TAAATAAAAACAGCCGTTGCC AGAAAGA GGC-ACGGCTGTTTTTATTTT AAAAGTAACTCTCGC 100 24
HCN55_RS07655 1466456 .. 1466483 -  -3.5  -5.60993   CTTTTCAGAAAAAAA        GAAGACAACCA GCGATT TGATTGTCTTT         ATTGTATCATGTTCT  84 67
HCN55_RS07650 1465135 .. 1465154 -  -9.3  -5.86609   CCAAAAAAATAAAAA            CAACGGC TTAAAC GCCGTTG             TTTATCGTCTGCATT 100 13
HCN55_RS07635 1459890 .. 1459914 -   -13  -5.95539   GGTGAAATAAAAAAA          GATTGCCTGT ACGAA ACAGGCAATC          TTTTTTTATTATTTT 100 34
HCN55_RS07620 1456085 .. 1456108 -   -11  -3.66646   AATATTTCACTTAAA          CGGGCTGTTG TGAT CAACAGCTCG           CTTTTTTATAAAAAA  88 15
HCN55_RS07575 1446572 .. 1446595 - -16.8  -5.08255   ACTCCTAAAATAAAA          CCAGCAGCCT AATC AGGCTGCTGG           CTTTTTATGTATCAA 100 37
HCN55_RS07545 1440849 .. 1440864 - -10.4  -5.08824   TTTTTATGTAAAAAA              GCTGCC GGCC GGCAGC               TTTTGAGAAAGCGAA 100 108
HCN55_RS07515 1435373 .. 1435395 -  -3.5  -5.64421   ATCCGAAAGAAAAAA           TGCCTAT CTAGAGATC ATAGGCA           TTAAATATTATTATC  84 262
HCN55_RS07485 1428884 .. 1428906 - -14.2  -6.04378   AAAGTATAAAAAAAA           GCGGCTTCCT AAA AGGAAACCGC           TGATTGTTATTTTGC 100 32
        motA NONE
        motB 1426927 .. 1426953 -    -8  -5.71638   TAATAAGTAAAAAAA         GGAAGCCTGATA TGT CACAAGGCTTCC         TTTTTTGCTATTTTT 100 33
        kinD 1424748 .. 1424770 - -13.4  -5.49569   CACGAAGATAAAAAA           CCCTCCTGAC ATG GTCAGGGGGG           CTATGATGCGGATAC 100 26
HCN55_RS07450 1423416 .. 1423436 - -16.9  -2.90486   AATAAGCGTGAGATA            GCCCCGTTC ATC GAACGGGGC            TTTTTATATTTATTG 100 35
HCN55_RS07420 1417768 .. 1417792 - -18.7  -5.00616   TGTGGCCGTAAAAAA          GCCTCCTTCTC AGA GAGAAGGAGGC          TTAACATCTATGTCC 100 285
HCN55_RS07415 NONE
        mtnA 1415417 .. 1415452 - -10.5  -6.11392   AAAGAAACAAAAAAA    CCGCT-GACTCGGCTC CAAAT GAGCAAAGTCCAGCGG    TTTTTTAATGCACCT 100 30
HCN55_RS07390 1411185 .. 1411216 - -11.6  -5.70522   AACAACAATAAAAAA      GACCTCTTAGGCGG CGTC CCGCTTAAGAGGTG       CTTTTTCTATTTTAA 100 32
        htpK 1407381 .. 1407400 - -12.8  -5.35224   TGGAGAAAAATAAAA            CCCCGGCC TCTG AGCCGGGG             TGGCGCAGACTATAG 100 35
HCN55_RS07360 1407050 .. 1407071 - -12.3  -3.49107   AGCTAAAAATGAAGA           TTCGCCGAG TGCC CCCGGCGAA            TAAAGACCTGAATTT  90 39
HCN55_RS07335 1400604 .. 1400626 -  -7.6  -5.41143   TATGGGTGAAAAAAA           GCCGGCGC TGTTATT GCGACGGC           TGTTCAATAATGAAT  95 13
HCN55_RS07330 NONE
HCN55_RS07325 1397787 .. 1397809 - -12.1  -3.81539   AGTTAAACACGGAAA           GAGCTGACT TCATT AGTCAGCTC           TTTTTCTTCAACTGA  93 19
HCN55_RS07310 1394019 .. 1394034 -  -3.2  -5.86965   ACCTATCAAAAAAAA              GACTGA TGCC TCGGTC               AGCACAGTCTTTTTT  88 43
HCN55_RS07300 1391762 .. 1391784 -    -2  -4.83169   ATTTTTTTATAAAAA           TCCTATATAC GAG GTAGATATGA           TGAGATTATCGTTTA  66 501
        tnrA 1390663 .. 1390686 -  -8.8  -4.84529   TTATAAACGTAAAAA          GTCCGTCTCA ACTG CGAGCCGGAC           TTTTATTATTTAACG 100 35
        thiU NONE
HCN55_RS07240 NONE
HCN55_RS07235 NONE
        thiX 1381330 .. 1381350 - -14.1  -5.84381   TCATCAATAAAAAAA            TCCGCTATC TGT GATAGCGGA            TTTTTTATGATGCGA 100 30
         isp 1378973 .. 1378998 - -14.1  -5.18726   TTCTCACAACAAAAA         GCCTCTTTCCC ATGA GAGAAAGAGGC          TTTTCTACGTAAAAC 100 336
        metE 1376574 .. 1376594 - -11.2  -5.74122   TATTATAGAAAAAAA            CCATCTGC CAAAT GCAGATGG            TTTTTTCAAATTATA 100 36
        guaD 1375935 .. 1375959 -  -9.3  -4.15703   TTGGAGAAATAACAA          GGACCAGGC CGCGCAT GCCTGATCC          TTTTAATATTCTTTC  85 28
        ohrR 1374696 .. 1374720 - -14.4  -5.47159   CTGAATAAATAAAAA          GAGGATGCCT GTACA AGGCATCCTC          AATTTTTTTGATGAA 100 24
HCN55_RS07145 1367291 .. 1367312 -  -9.5  -3.92869   AACACATACATGAAA           CTCTTCTCC TTTC AGAGAAGAG            TTTTTTATTGAGATA  83 66
HCN55_RS07130 1364270 .. 1364280 -    -4  -2.50387   CTTGATAAAATAAGC                 TGTT CAA AACA                 TGAAAAAGGGGAAGA  45 45
         pgl 1363126 .. 1363153 -  -9.2   -5.4659   TAAGATAAATAAAAA        GAGTGGCTCC TTTTTACT AGAGCCACTC         CATTTGTTTATACTT 100 33
        htrA 1351185 .. 1351212 - -15.6  -5.10461   TTTATCTAATAAAAA        GCCTCAGACCGC TTTT ACGGCCTGAGGC         ATTATGTCTTACGAA 100 34
HCN55_RS07065 1350711 .. 1350735 - -17.2  -3.69354   TGTCATAACCTCAAA          CCCCCTGTCC GTAAT GGACAGGGGG          TTTTTATGCTCTGAG 100 177
        steT 1344632 .. 1344654 - -13.5  -5.14563   TGTTTCACCAAAAAA           CGGTTCCCT AAACA AGGGAACCG           TTTTATCAGCTTGCT 100 31
HCN55_RS07035 NONE
HCN55_RS07030 1342725 .. 1342745 -    -9  -5.52384   GTTCCATCAAAAAAA            CCGCTCCT TTGAC AGAAGCGG            TGTGACATTAAAATA 100 33
     spoIISA NONE
HCN55_RS07020 1341691 .. 1341715 -  -7.9   -4.0219   TAAGAAAAGGAATAA          GGACAAGAG CTGTTTT CCCTTGTCC          TTTTAGTGTGATCAT  76 37
HCN55_RS07015 1341484 .. 1341502 - -14.6  -5.00846   CAAAGACCATAAAAA             TCCCGGAG CCG CTCCGGGA             TTTATTTTTTCTTCT 100 27
HCN55_RS06830 1314501 .. 1314513 -  -2.6   -5.0065   TAGCGAGAAAGAAAA                GCCC GTATA GGAC                TGGAAGGTAGTGTAG  68 126
HCN55_RS06825 1313569 .. 1313586 -  -4.1  -3.86252   CTGGAGGAAAGAGAA             CGGGA TATTGTCG TCCCG              ACGACGTTTCCGCGT  57 294
HCN55_RS06810 1311775 .. 1311810 - -17.8  -3.67068   AGGAAAAGCTGTAAA    TGAAAAGACGGAAGCT GTGA AGCTTCCGTCTTTTCG     CCTTACATACAAACT 100 28
HCN55_RS06800 1310424 .. 1310437 -  -8.1  -5.64274   TGATGCATAAAAAAA               GACCC TTAG GGGTC                TTTTTTATTTCTTCA 100 30
HCN55_RS06780 1307086 .. 1307105 -  -6.5  -5.77853   AAGGCGCAAAAAAAA            GATACCT CTTAAC AGGTATC             TTTTTTCTTGTTTAC  93 42
HCN55_RS06775 1306103 .. 1306125 -  -9.2  -4.95547   GTTATAATAAGAAAA           GGCTATCC TTCAAGC GGATAGCC           TTCTTCATTAAATCA 100 33
HCN55_RS06705 1289868 .. 1289893 -  -8.3  -4.59342   GGTAGCACAAATAAA         GGAGAACAGGC TTTC ACCCATTCTCC          TGCAGATGCTACGCA  88 34
HCN55_RS06700 1289021 .. 1289034 -  -5.3  -4.24623   TTAAAGAGAGAGAAA               GGTAA TCCA TTACC                GAGTGCCTCCCTTCA  67 21
        fetB 1288245 .. 1288268 - -11.8  -5.03945   TAACAAGTACAAAAA          GCCGCTTTTCC CTC GGAAA-GCGGC          TTTTGTCTGTCATTC 100 35
HCN55_RS06685 1287029 .. 1287049 - -12.7  -5.36364   GTAAAAACATAAAAA            CCGAAATCA ATT TGATTTCGG            TTTTCTGTTTAAATA 100 34
HCN55_RS06670 1283931 .. 1283952 - -13.1  -5.15634   TATTTGACTAAAAAA           GAAAGAGCC TGTG GGCTCTTTC            TTTTTTATAATGTAA 100 30
HCN55_RS06645 1278127 .. 1278142 - -10.4  -5.14563   TTGTCCACTAAAAAA              GCGGCT GAAT AGCCGC               GTAGGGTGTTTATTT 100 35
HCN55_RS06640 1277650 .. 1277668 -  -3.7  -5.21709   TTCTACATGAAAAAA             GCGTCAC ATACA GCGGCGC             TTTTTGATTCCCAAA  74 10
HCN55_RS06630 1276408 .. 1276438 -  -5.3  -4.44667   TTTGTGAACAATAAA       GGCGGCCGGGA GGATGGAGT TCTTGGCCGCC       TCTGGTATGAGGTTA  70 38
HCN55_RS06625 1275818 .. 1275847 - -13.7  -3.20126   AAGCGAAATAAATTA       GAAAAGGCTGTCC GTAC GGACAGCCTTTTT        TCTATTTAATAAGAG 100 31
        cotT 1273871 .. 1273891 -  -4.7  -6.09196   TTTAAAACAAAAAAA           TGGGGAGC TGGACT GC-CCCCA            TTTTGATATGTGGCG  95 42
        cyoE 1272766 .. 1272787 -  -4.4  -5.63517   TTTCCAAACAAAAAA           GAGTCACA TTAATG TGTGGCTC            TTTTTGCATCATCTG  86 34
HCN55_RS06605 NONE
HCN55_RS06600 1271472 .. 1271492 -  -4.7  -4.87291   TAGGGGAACGAAAAA            GCTTAGTCA TAT CGATTAAGC            TTTTTCCGCATCCCT  74 20
HCN55_RS06590 1270177 .. 1270204 -    -2  -2.98105   ATAACATATAACAAT        TTTCTCTGGTAC CTTG GCAGTAGAGAAA         GATGAAAAAATTGAG  42 165
HCN55_RS06585 1269580 .. 1269606 - -15.3  -3.89435   GGTAAATAATCCAAA         CAAAAGCAGGC GCAGT GCCTGCTTTTG         TAATTAAGGACTCTA 100 38
HCN55_RS06560 1262936 .. 1262968 -   -10  -4.28432   AACTTGAAGCGAAAA     TAAGGTCCCTTCTCT TTTT AGAGG-GGGACCTTA      TTTTATTCATGCATG  86 72
HCN55_RS06510 1256896 .. 1256922 - -11.6  -5.04325   TTTAAATTACAAAAA         TCCCCTGAACCA CTC TAGATCAGGGGA         TTGCTTTCCCAACAG 100 87
HCN55_RS06500 1254702 .. 1254719 -  -2.7  -3.51234   AGGGAAATGCAAATA             TCCTTTT TATA AGAAGGA              AGAAAACCAATTTCC  48 14
HCN55_RS06495 1254065 .. 1254087 - -10.6  -5.00616   CGGTTCGTTAAAAAA           GAAGCCGG GGATAGT CCGGCTTC           TTTTATTATTGTTCG 100 31
HCN55_RS06480 NONE
HCN55_RS06475 NONE
HCN55_RS06470 1249691 .. 1249712 - -13.1  -4.76041   TATATGCAGTAAAAA           TCCGGATCT CAAA AGATCCGGA            TGCGTTCAGTCCTTC 100 31
HCN55_RS06460 1246972 .. 1246991 -   -15   -4.8048   TTTTTACAGTAAAAA            CCCGGCAG TAAT CTGCCGGG             CTGTTAATGATGCAA 100 29
        cotV NONE
        cotW NONE
        cotX 1243909 .. 1243929 -  -8.3   -5.4593   GGAAAATAAGAAAAA            GCAGAGC GTTTTTA GCTCTGC            TTTTAGGTCCTAGAG 100 35
        cotY NONE
        cotZ 1242687 .. 1242714 - -13.6  -2.98823   CTTTTTTTACATAGA        GAAAAGCCTGCA GGCC TGCAAGCTTTTC         CAGCTTATGATTAAT 100 36
        prpE 1232643 .. 1232665 -   -15  -4.51799   AGCAAACTGATAAAA           GGAGAGAATC ATT GATTCTCTCC           TTTTTTATATGGGGC 100 30
HCN55_RS06335 NONE
        cwlQ 1228423 .. 1228445 -  -6.3  -5.41143   CACTTCGCAAAAAAA           CCAGAGG GAAAGAGCA CCTCTGG           TTACGCGTAATAAAC  89 26
HCN55_RS06325 NONE
        spxH 1226870 .. 1226899 -  -7.1    -5.626   TATGGCATAAAAAAA       CAGCCTCAAGCAT ATGC ACGCCTGCGGCTA        TTTTTCACATGATTG 100 23
HCN55_RS06315 1226387 .. 1226411 - -12.9  -3.93166   GTCTTAAAAAAGTAA          GCCTGTGCG GAAATGA CGCACAGGC          TTTTTTAAAACCCTT  95 30
HCN55_RS06300 1222582 .. 1222603 -  -2.9   -4.3898   ATCATCGTCACAAAA           GCCCAGCTT TCCA AAGACGGAC            AAAAGCTCGAACTGC  60 424
HCN55_RS06285 1221394 .. 1221415 - -13.1  -4.30844   ATCGTATCATCAAAA           GAAGGCTGA GTCA TCAGCCTTC            TTTTATTTTTCAACC 100 28
        trpS 1211368 .. 1211387 - -12.2  -5.53288   GTCAACTGAAAAAAA            CCGCTCTT TGCA AAGAGCGG             TTTTTTGATTAGCGT 100 34
        yjzB 1201077 .. 1201096 - -10.8  -4.14147   ACAGAATAAGAAGAA            GCCACTTT TTTG AAAGTGGC             TTTTCACATGATTTT  89 29
HCN55_RS06165 1197979 .. 1198001 - -10.7   -5.1861   GTGACCACTAAAAAA           CCCAAAACA ATAAA TGTTTTGGG           TTTTTGGCTTTTTAA 100 37
HCN55_RS06095 NONE
HCN55_RS06090 NONE
HCN55_RS06085 1183288 .. 1183314 - -15.2   -4.0098   TTTGAAGTCAAATAA         GAGGCTATGGCG AGT CGCCATAGCCTT         TTTTTATTGCAGTTT 100 29
HCN55_RS06070 1180947 .. 1180970 -  -6.1  -5.34309   ATGAGCAAACAAAAA          CAGTCAGGAC ACAGA GTC-TGACTG          TTTTTGTTTGCTCAT  89 37
HCN55_RS06045 NONE
HCN55_RS06040 NONE
HCN55_RS06035 1175686 .. 1175718 - -15.6  -4.37971   AAAATAGCATGAAAA     CGGCTCGC-CTGCAG CAGA CTGCGGAGCGAGCCG      TTTTTTTATGTCTAG 100 37
HCN55_RS06025 1173928 .. 1173946 -  -8.2  -6.04953   AGAGAAATAAAAAAA             GTCCTCTT AAG AAGAAGAC             TTTGTCAGTGATTTT 100 270
HCN55_RS06020 1172005 .. 1172029 - -15.1  -4.57341   AATCTCGTTGAAAAA          GACTGCCCGAT TCG ATCAGGCAGTC          TTTTGGAAATTAATG 100 35
HCN55_RS06015 NONE
HCN55_RS06010 1170612 .. 1170634 -  -9.9  -5.24989   TCAGACAGCAAAAAA           CCGAACAGA AGATA CCTGTTCGG           GAAAAAAGAGGGTTA 100 38
HCN55_RS06005 NONE
HCN55_RS06000 1168134 .. 1168158 - -10.7   -4.8743   CTCAAAATAAAGAAA          TGGCCCAGCTT AAT AGGCTGAGCCA          TCCCACTTGTAGCGA 100 10
HCN55_RS05995 1166966 .. 1166994 -  -3.1  -4.59342   CCGATGACAAATAAA        GAGAAAGCGGC TTACATT GCCGATTTTTC        TGATGAATTTCTTGT  66 449
HCN55_RS05980 NONE
         sat NONE
        cysC 1163139 .. 1163154 -  -6.8  -5.56673   ACTCATAAGAAAAAA              CCCGAC ATTG ATCGGG               TTTTTTATATAATTC  93 30
HCN55_RS05960 1161435 .. 1161458 -   -11  -3.75461   GAAACTGGCATTAAA          GCGGCA-GCTG AAA CAGCACGCCGC          CTGATGATGTCCTAG  88 48
HCN55_RS05950 1159302 .. 1159312 -  -3.2  -4.19238   CCTTCAATTGCAAAA                 GAGT GAC ACCC                 CAAAATATCCTGCCG  59 3
HCN55_RS05945 1158720 .. 1158741 - -11.6  -5.40072   CTTTCCGCAAAAAAA           GCAAGGGC ATTTTA GCCCTTGC            TTTCTCTTTTCTCAT 100 15
HCN55_RS05925 1154033 .. 1154057 - -10.7   -5.1287   CTGATATCTAAAAAA          CACCCGGCC TTGATTG AGCCGGGTG          TTACGCCATACCTTT 100 26
HCN55_RS05915 1152415 .. 1152451 -  -6.1  -4.11346   AGATTTAAATAAGAA   GGATAGAT-GAGCA GGGAAATATA TGCTCTATCTATCC    TTTTTTGTACAACAG  67 67
HCN55_RS05905 1149763 .. 1149781 - -11.7  -4.97312   AAAAGTAACCAAAAA             GCGGTGC TCGAT GCACCGC             TTTTTTATTTGCGCC 100 30
HCN55_RS05885 1144408 .. 1144424 -  -2.9  -5.16237   AATTTGACTAAAAAA              GCGACAA TTT TTGCTGC              GGCCTTTTTTAATGG  70 49
        yisI 1143922 .. 1143953 -    -8  -2.70354   TTGGGTATAAATTGA      GCGGAAATGCGGC GAAGGAT GCCGC-TATCCGC      CTATGGTGATTTTTG  63 204
HCN55_RS05875 NONE
       gerPB 1143244 .. 1143257 -  -3.7  -3.24747   CTTTCATATGATTAA               CGGCC AGGA GGCTG                GAGCGGGACCAATGA  48 8
HCN55_RS05865 NONE
       gerPD NONE
HCN55_RS05855 1141998 .. 1142012 -  -2.1  -3.86194   AATTGCTGGCATAAA               CGACA CCCTT TATCG               AAGTCTCTGTTTATT  51 39
HCN55_RS05850 1141747 .. 1141773 -  -8.8  -4.88129   AAAAATGACTAAAAA        GCAGCC-CTCT CTTTGC AGAGCGGCTGC         TTTTATCCGTTTCCA 100 28
HCN55_RS05820 1128963 .. 1128977 -  -5.7  -2.93382   GGGGATATGTACATA               TACCC TGAAT GGGTA               TATCTAACGTTCCAT  52 29
HCN55_RS05815 1128511 .. 1128532 - -10.2  -5.27335   CTGTCCAAATAAAAA           GAGGGTTC TTTTTT GAACCCTC            TTTTTTACGCTGCCA 100 30
HCN55_RS05805 NONE
HCN55_RS05800 1124025 .. 1124057 - -12.3  -3.49951   TATATCTTTATATAA      GAAAAAGAGGTTA TTCATTT TAACCTCTTTTTC      AATCGTAAGTCGTCA  90 168
        ntdA NONE
        ntdB NONE
        ntdC 1119634 .. 1119653 -  -7.9   -4.8048   CCCCTATATGAAAAA            GCAGGAA AGTAAA TTCCTGC             TTTTTTAGTAACTTC  88 54
        glcP 1118252 .. 1118269 - -11.3  -5.63517   TTTTTAAATAAAAAA             CACGCAC TGCG GTGCGTG              TTTTTCGCTTTGTTT 100 161
HCN55_RS05750 1114165 .. 1114179 -  -2.8  -3.11341   AAGCGTACTGAAAAT               GATGTC GCA GATATC               GCAGCACATGTCATT  45 164
HCN55_RS05745 NONE
HCN55_RS05740 1112403 .. 1112440 - -15.3  -3.66178   CCTGTGAACGGTAAA   TAAGAAAAAGCAATCTGG TGT CCAGATTGCTTTTT-TTA   TGCTTAGGCCGCCTG 100 29
HCN55_RS05730 1110977 .. 1111009 -   -12  -4.08042   GGTATTAGAAAAATA      GGAAGGAGCTGACC GAACA GGGCAGCTCCTTTC      ATAAAGCTATGCCGT  93 32
HCN55_RS05720 1109844 .. 1109864 - -14.1  -5.21236   AACGGATAATAAAAA            GCCAATCCT TGA AGGATTGGC            TTATTCGCTCTGCTT 100 26
HCN55_RS05710 1107319 .. 1107336 -  -8.5  -5.10077   AAATATTTGAAAAAA             CGTTCAT TAAA ATGAACG              GTTTAATCGAGATCT 100 28
       hemAT 1105872 .. 1105891 -  -4.2  -5.54192   ATGAACGCAAAAAAA            CCGGCC GTATGGCA GACCGG             TTTTTGATGGTTATT  84 36
HCN55_RS05700 NONE
HCN55_RS05695 NONE
HCN55_RS05690 NONE
        phoE 1101994 .. 1102011 - -11.3  -5.06223   AGAAATTAAAGAAAA             GACAGGC AAAC GCCTGTC              TTTTTCTTATTTGAT 100 32
        aprE 1097670 .. 1097695 -  -9.1  -5.38054   GCTGACAAATAAAAA         GAAGCAGGT ATGGAGGA ACCTGCTTC          TTTTTACTATTATTG 100 35
HCN55_RS05655 1095806 .. 1095838 -   -18  -4.63218   TTTGCCCCAATAAAA      TGAAAAAGCGAAGC GGTTA GCTTCGCTTTTTCA      TTTTCAATCCTTTGC 100 29
HCN55_RS05630 1091366 .. 1091396 - -16.3  -4.63089   TATGTGAAAAAATAA       GAAAATCCCACGC GTAAG GCGCGGGATTTTC       GCTCATTACAAATCG 100 31
        gltT 1089810 .. 1089835 - -18.3  -5.32699   TTAAAGATTAAAAAA         GCCTGCGGGGC AAGA ACCCCGCAGGC          TTTTCATTAACCAGA 100 32
HCN55_RS05610 1087937 .. 1087963 -  -8.1  -2.62244   TGTTTCAATAAAAGG        TCCAAGC-AGCA GCAA TGCCCGCTTGGA         AAAATGTGAATGGAA  65 78
HCN55_RS05600 1086018 .. 1086043 - -13.5  -5.38054   CTTCATAAAGAAAAA         GAACTTGTTTC CTTG GAAACAAGTTC          TTTTTTTGTTACATC 100 34
        hmoB 1076491 .. 1076511 -   -14  -4.43307   CTCCCAATAAAATAA            GCTGCCGG ACATG CCGGCAGC            TATTCGACAGCGAAA 100 25
HCN55_RS05560 NONE
HCN55_RS05555 1074688 .. 1074702 -  -2.8     -2.55   GAATATTTCAACTCA               TGCTGT TTT AAAGCA               TCATCACAGCTGCGA  41 18
        sndC 1073401 .. 1073426 - -11.9  -4.12738   GGATATTAAAGGAAA         CAGCCGGAG AATAAACA CTCCGGCTG          TTTTTTTATAGCTGA  93 31
HCN55_RS05530 1069787 .. 1069810 -  -8.2  -5.18371   GTTCACAAAATAAAA          TAACCTCATC TTAT GATGAGGCCA           GGCGTTTTGCGATAG 100 12
        serC NONE
        trpP 1067893 .. 1067914 - -12.3  -5.40072   CTCTGTTCAAAAAAA           CCTCTCCCG GAAG CGGAAGAGG            TTTTGTGTGACAATT 100 39
HCN55_RS05510 1067132 .. 1067154 -  -6.3  -5.75342   TTCGGCCAAAAAAAA          TACGGGTCCA ATTT TGG-CCCGCA           TTTTTTTCTTTTGAA  91 48
HCN55_RS05505 1066233 .. 1066269 -    -3   -5.0916   CTGGCAACACAAAAA   GCGCAAGGATTTGTAAC CTTT GATA-AGCTCCTTGCGC    TTTTTGCCGGACAGC  73 144
HCN55_RS05495 1065220 .. 1065232 -  -6.9   -2.5763   ATAGAATAAAATGAT                GGGAG ATT CCCCC                TCTCTCTGAACTGTC  60 117
HCN55_RS05490 1064986 .. 1065030 -   -16  -3.39895   GGCTGTACTAATCAA CATAAAAAAGCATAGCTGCT TAATC AGCAGCTATGCTTTCTTTCG TATTTACACTGTAAA 100 29
        prsA 1063611 .. 1063637 - -22.4    -5.626   CATCGCATAAAAAAA         GCTGTGCGGCTC AAT GAGCCGCACAGC         TTTTTTTATTATTTA 100 34
HCN55_RS05440 1055435 .. 1055467 -  -5.5  -2.81195   AGAACTGAAAAAAGT      GCTATCCCTTGAGCG CAG CGCCCAAGAGAGAAT      GAGAAGGACCAAGGA  50 119
        khtS NONE
        khtT 1053693 .. 1053703 -  -5.4  -3.82946   CGACTTCAAATACAA                 GATG GTC CATC                 GGGGCTCACACGCCC  63 31
        khtU 1052458 .. 1052479 - -14.5   -4.3179   TGAAAAAACGACAAA           GCAGCACTG ATTA CAGTGCTGC            TTTTTTTATCCCTGT 100 31
HCN55_RS05405 1048391 .. 1048412 - -11.7  -4.56133   GGCTAATAAGCAAAA           TCCCTTCTT GGAT AAGAAGGGA            TTTTTTATTCACTCA  95 38
HCN55_RS05390 NONE
        yheD 1044066 .. 1044089 -  -8.9  -3.89695   TTTGGATAAAGATAA          GCCCGCTTT ATTAAA AAAGCGGAC           AGGTTACGAAGGCCA  80 29
HCN55_RS05380 1043705 .. 1043725 - -11.2  -6.02919   TGAGAAATAAAAAAA            GCTTAGCC GTTTA GGCTAAGC            TAGTCATAAATATGA 100 25
HCN55_RS05375 1043270 .. 1043292 -   -17  -4.77173   GGGTGACAAAATAAA           GAGAGCGCGG AAA CCGCGCCCTC           TATAGCCATATATTG 100 46
HCN55_RS05370 1043078 .. 1043094 -  -2.3  -3.20028   TTCATTATAAAAGGA              TGTTC TCAGTTT GAACA              GCGCGGGAAAGAATA  43 14
HCN55_RS05365 1042386 .. 1042407 - -11.7  -4.63542   CATAACGCTCAAAAA           CCCAAAACA ATCG TGTTTTGGG            TTTTTGGTTTATGTA  95 42
HCN55_RS05345 1037638 .. 1037658 - -11.9  -4.45115   ATGAATATAAAAGAA            GTGAGCACA GGG CGTGCTCAC            TTTACAATCAGGACG 100 22
        nhaC 1036139 .. 1036163 -  -7.9  -4.81082   AATGAACGAAGAAAA         GAG-CCCGCT TTTTAC AGCGGGGCTC          TTTTTATTTTTTAAC  88 29
HCN55_RS05330 1034116 .. 1034138 -  -9.1  -4.72272   TTTGGGCATGAAAAA           GTGAGCCGC TTTAT GCGCCTCAC           TTTTTTATTCATGAA 100 30
HCN55_RS05310 NONE
HCN55_RS05305 NONE
        crcB 1029993 .. 1030009 -  -6.5  -3.42256   ATCGATTCAAGAAGA              CGTCGAT ACG ATCGGCG              GGCTGATATTAAAAG  59 251
        cueR 1026686 .. 1026712 -  -7.4  -3.51329   TATGTCCAATTAGAA         CCTTCACTCT AGCAATG AGAATGAAGG         TAACACCTCCTGTTA  67 53
HCN55_RS05280 1025311 .. 1025344 - -16.3  -4.17089   CTGAAACTGTGAAAA     TAAGAAAAGCACCCT ATAC AAGGTGCTTTTCTTA      TTATGCTTCCTGCTG 100 26
        sigM NONE
HCN55_RS05260 NONE
HCN55_RS05255 1021493 .. 1021510 - -11.3  -5.32944   GGTATAACGAAAAAA             GACGCCT GAAA AGGCGTC              TTTTTTAAAAGCCAA 100 30
HCN55_RS05245 1019507 .. 1019528 - -11.5  -5.06451   TATCATTTTAAAAAA           CAGGCTCCG TTTC CGGGGCCTG            TTTTTTATTTAATAA 100 34
        citR 1013298 .. 1013315 - -11.3  -4.53705   AATTTTTAGAGAAAA             CCCGTTC ATTG GAACGGG              TTTTTTTCATTAGAC  95 65
        phoA 1010340 .. 1010363 -  -9.6  -5.29782   GATATTTATAAAAAA          GAGGATGCAG CGTT CTGCATCCTT           TTTATTTTCCAGTTT 100 27
HCN55_RS05200 1007198 .. 1007243 - -13.5  -6.11019   AAAAATGAAAAAAAA GGAATTAAAAAACATGCACCC AGCT GGGTGCATGTTTTTTGCTTAC ATGTCATTCGGCGGA 100 22
        nsrR 1006679 .. 1006702 -  -5.4  -5.63504   AAGGGCATAAAAAAA          GAAGGAAT CTTAATCT ATTCCTTC           ATTTTTAAAAGCTTC  88 16
        lytF 1005040 .. 1005064 -   -10   -5.4505   GGCTCTAATAAAAAA          CTGTACAGCC GTTAA GGCCGCACAG          TTTCTGTTTTTAGAA 100 35
HCN55_RS05180 1004239 .. 1004260 - -15.9  -3.93057   CGCAAAAGCAGGAAA           TCCCGGCGT CTAA ACGCCGGGA            TTTGTTTATGTGAGA 100 31
HCN55_RS05110  988880 ..  988899 -   -10  -4.67353   CGAGTGACTTAAAAA            GCCG-AGGC AGT GCCTGCGGC            TTTTCTTCATGAAAA  91 32
HCN55_RS05095  983854 ..  983890 -  -2.4  -5.51165   AAAATTTGAAAAAAA   CAGTGCGGCATTGGATAG TAT CTATCCAATGC--CTTTG   TTATTAGTGAAGTCC  81 29
HCN55_RS05080  981670 ..  981693 -   -14  -4.43213   CGTAACATATGAAAA          CGTGTAATCC AAGA GGATTACACG           TTTTTTTAACGGCCA 100 31
        dgcK  978774 ..  978789 -  -2.4  -5.68023   TCAGAAGCAAAAAAA              GCGGGC TTGA ACCCGA               AAAAGCATACGCTAA  86 252
HCN55_RS05060  977504 ..  977523 - -12.2  -5.45802   TTGTCAAAATAAAAA            CTGCAGGT TTGC ACCTGCAG             TTTTTCATATCAATT 100 46
HCN55_RS04960  960490 ..  960508 -  -8.9  -4.62069   TTTTTATGTGAAAAA             GAACACG GTATT CGTGTTC             TTTTACGTAAGCCAA  90 28
HCN55_RS04950 NONE
HCN55_RS04945  959468 ..  959493 -  -9.7   -5.4505   GCTGGTAAGAAAAAA         CTCCGGC-CGAT TAC AGCGCGCCGGAG         TTTTTTTCGTTTTTC 100 10
HCN55_RS04910  952783 ..  952800 -  -9.1  -5.88197   CTAAATATAAAAAAA             CCCGCTG ACTA CAACGGG              TTTTTGCATTTCTCC 100 42
HCN55_RS04900  950956 ..  950981 - -14.9  -6.13503   TATCAATAAAAAAAA         TGAAGATGGAG AATG CTCCATCTTCA          TTTTTTTAGAAAAAC 100 31
HCN55_RS04885  947781 ..  947812 -   -16   -5.5112   TGGAGCAATAAAAAA      GAGACGGCATCTCA TCTT TGAGATCCCGTCTC       TTTTTGTGGTCTTTG 100 74
       spo0M  946587 ..  946608 - -13.1  -4.70659   CGGTATACTGAAAAA           CCCGTTTCT TAAC AGAAACGGG            TTTTTATTTTTTATT 100 72
HCN55_RS04770  938210 ..  938238 -   -14  -4.86773   GAAAATCATTAAAAA        TAAGCTGACCGC ACGAA ACGGTCAGCTTA        TTTTATTTCGACATT 100 28
HCN55_RS04755  935696 ..  935714 - -13.2    -5.626   GATTCCATAAAAAAA             CAGGAGCT CAA AGCTCCTG             TTCAAGGTATTTGAT 100 42
HCN55_RS04750  934432 ..  934449 -  -9.1  -5.71712   TTGTATATAAAAAAA             CCCGGCT GTTT AACCGGG              TTACTCTTCTGTTTC 100 26
HCN55_RS04720  930021 ..  930040 - -10.7  -3.42346   AAGATGGCAGGAGAA            GCAGCCG CCATCT CGGCTGC             TCCGTAAACCATTCT  80 40
HCN55_RS04710  927731 ..  927754 - -14.6  -4.76312   TATAAGACGTAAAAA          GCCCGGCTCT ATAT AGAGCCGAGC           TTTAATTTTTTCTGA 100 10
HCN55_RS04675  921366 ..  921386 - -11.2   -5.1361   ATAAAGGGTAAAAAA            CAGCTGCA GTGTA TGCAGCTG            TTCTTCTTTACCGTT 100 33
HCN55_RS04655 NONE
HCN55_RS04650  917714 ..  917728 -  -5.8  -3.87956   AAAAGTGATATCAAA               CAAATA TAG TATTTG               GTTTTAAGGGGCTAT  65 47
HCN55_RS04645  917458 ..  917484 - -16.7  -5.22039   CTGAAATGTAAAAAA         CCCCTTGTCTC AAACG GAGACAAGGGG         TTTTTCATTAACGAG 100 33
HCN55_RS04620  912619 ..  912642 - -15.4  -5.46698   GGCAAAAGCAAAAAA          GACTCCGTCT AATA AGACGGAGTC           TTTTTTTATTTCGTT 100 31
HCN55_RS04610  909368 ..  909397 -  -7.1  -5.95539   TGTCAAATAAAAAAA       GCCTG-CTCCCGCA GTT TGCGGATGACAGAC       TTACTGATTTATTCT 100 34
HCN55_RS04605  907362 ..  907375 -  -3.8  -2.88663   AGCCAGCTTGACACA               CCGT ACCGGG ACGG                TGGATGGACCGTTCG  46 389
HCN55_RS04595 NONE
HCN55_RS04590  905218 ..  905239 - -15.9  -4.41633   CAGGGTGAAAAACAA           GCGGCAGGA GGGC TCCTGCCGC            GTTTCTTTACTTCTC 100 32
        padR  902412 ..  902432 - -11.2   -5.0538   TCCGAGCCTAAAAAA            CATCTGCC GTTTA GGCAGATG            TTTTTTTGCATGTGG 100 73
HCN55_RS04490 NONE
HCN55_RS04485 NONE
HCN55_RS04480 NONE
HCN55_RS04475 NONE
HCN55_RS04470  879501 ..  879511 -  -5.4  -2.85606   TTATAGAGGAGGAGA                 GCTT TTA AAGC                 TTCGGATGATTCTCA  52 19
HCN55_RS04465  879098 ..  879120 - -14.2  -5.34309   AGGATTAAACAAAAA           TGGCCCGCTT CAT AAGCAGGCCA           TTTTGTTATCCGCGC 100 31
        corA  864610 ..  864628 -  -6.7  -5.55769   GCTTACAACAAAAAA             GAACAGC TGCTC GCTGTCC             TCATTTAAAAATATT  93 26
HCN55_RS04395  863643 ..  863662 -  -9.3  -3.82656   TGTAAAAGAGAAAGA            CCTCTCC TTAAAC GGAGAGG             CTTTTCTTTATTTTA  83 33
       yfkAB NONE
        mscC  860416 ..  860436 - -10.5   -5.7827   AAGATAAATAAAAAA            CTGATTCCA ACT CGGAATCAG            TTTTTTTGTTTATTG 100 35
HCN55_RS04360  857112 ..  857136 - -14.3  -4.49311   ACCATTAGCATAAAA          GCCTCCTGACA TGA TGTCGGGAGGC          TTTTTGATTAAGAAG 100 33
HCN55_RS04340  854840 ..  854863 -  -8.8  -5.42265   GGAAATGATAAAAAA          GACTCGCCGA GTTT CCGGCCAGTC           TCCATTATTTACGAA 100 30
HCN55_RS04335  853553 ..  853572 - -10.7  -5.74288   AGAAATAAGAAAAAA            CGGACGC TCTTGG GCGTCCG             TTTTTTTGTTGCTTA 100 38
HCN55_RS04325  848369 ..  848389 - -16.9  -4.67697   GTTTAAAAGAAGAAA            GCTGCTCGC ATA GCGAGCAGC            TCTTTTTTATGCCTG 100 32
HCN55_RS04300 NONE
HCN55_RS04295 NONE
HCN55_RS04290 NONE
HCN55_RS04285 NONE
        ltaS  835303 ..  835324 - -15.9  -5.63517   CTGTCAAATAAAAAA           GCGGAGAGG GCAA CCTCTCCGC            TTTTTCTTATTTATC 100 32
         map  832995 ..  833014 -  -3.4  -3.62096   TTGGAGGAGGTTAAA            CCTGCCGG AAGC CCGGAATG             TGTTTTACAGTTTCG  50 30
HCN55_RS04250  832595 ..  832615 - -15.4  -4.34759   GACAATATCAAGAAA            GCCGGGCG CATAT CGCCCGGC            TCATGTTTTATTGTT 100 33
HCN55_RS04245 NONE
HCN55_RS04240  832033 ..  832056 -   -11  -5.47159   GTTGAATAGAAAAAA          GCCGCGCA TATCAACG TGCGCGGC           TTTGCCATATTTAAG 100 36
HCN55_RS04230  830980 ..  830992 -  -2.7  -3.40403   CCGCTCCTATGATAA                CTCAA TCG TTAAG                CCGAACTATTTTTAT  46 52
HCN55_RS04180  820114 ..  820137 -  -3.1  -3.72893   TATTTTTTTAGTAAA          GAAAGCTGC GTTTTT ACTGCTTTC           TCATGAAAGCATCAT  52 15
HCN55_RS04175  819039 ..  819061 - -10.6  -3.80855   GGTTGCAAAAACGAA           GAAGCAAGGA TTC CCCTCGCTTC           TCATTTGTCCTATTT  86 35
HCN55_RS04170 NONE
        yfmE NONE
        yfmF  816144 ..  816166 -  -9.8  -3.72395   ATAAGGGAAAATGAA           GGCTGTCACG TTT CTCGACAGCC           CTAGGGAATTCCTCT  84 46
HCN55_RS04150  812527 ..  812537 -    -4  -4.15044   CTTTTGGTCAATAAA                 GTAA TGT TTAC                 TTATTAATTAAACAC  58 83
HCN55_RS04145  811060 ..  811078 - -11.7  -4.80455   CATCGAAACACAAAA             GGAGGGC AAAAA GCCCTCC             CGTTTTCATCTTCAT 100 41
HCN55_RS04130  807636 ..  807655 -  -8.5  -5.16237   AATGGCAGTAAAAAA            CCCGCCC TTTAGC AGGCGGG             TTTTTTTATAAATTA 100 38
HCN55_RS04090  798706 ..  798729 - -14.6  -5.31158   TAAAAAAAGGAAAAA          GCCGGCGGGTG AGG CACC-GCCGGC          TGAAAAGAGATTATT 100 36
HCN55_RS04085  797927 ..  797956 - -11.6  -4.49556   TTCTTATGAAAGAAA       TACCGTCAGCCTG ATTAG CAG-CTGACGGTA       TTTTCGATATTCAAA  95 10
HCN55_RS04080  796575 ..  796596 - -11.5  -5.14965   AGCTGGATTAAAAAA           CCCCCTGCC GCCT GGCAGGGGT            TTTTTCAGCTATGCC 100 30
HCN55_RS04040  784721 ..  784742 - -11.7  -4.51363   TATTAAATAGGAAAA           GTCCAGAAA GTGA TTTCTGGAC            TTTTTAGTCTTGCTC  95 29
        yetL  782871 ..  782892 - -14.5  -5.72622   GTCATAAAGAAAAAA           CAGCCGGAT GCGT ATCCGGCTG            CAGAAGAAAAGACGC 100 69
HCN55_RS04005  779258 ..  779277 - -13.6  -5.82172   AGTAACATAAAAAAA            TCAGCCGG GAAA CCGGCTGA             TTATTAAAATGAGCA 100 29
HCN55_RS04000  778792 ..  778820 - -13.1  -4.46233   TCAATGTCAAAGAAA        GCGCAGGGCGG AATCGAA CCGCCGTGCGC        AACAGTTTATTCTTT 100 32
        hmoA  778374 ..  778393 -  -8.6    -5.252   GACTCTTAGAAAAAA            GCTTGCAGC AAG GC-GCAAGC            TTTTTATTGATTGTA 100 29
HCN55_RS03820 NONE
HCN55_RS03815  740329 ..  740354 -  -6.9  -5.24129   TTGGTTTATAAAAAA         TAGCTCAGC AGAGTAGG GCTGAGCCA          TTTTTTAATTATAGA  90 34
HCN55_RS03810 NONE
HCN55_RS03805  739444 ..  739463 -  -2.1  -5.78622   CGACCGCAAAAAAAA            TTTTCGG TGCTGT CCGCAAA             AGGGAGTTTGGGTGT  83 107
HCN55_RS03780  732063 ..  732077 -  -5.6  -4.63932   GACCCGCCAAGAAAA               GGCTGC GAC GAAGCC               CTCCTGCGGACAATT  74 227
HCN55_RS03760  725231 ..  725248 -  -9.1   -5.4756   AACGCTAATAAAAAA             GCAGCCC TTAG AGGCTGC              TTTTTTTATGGTCAA 100 15
        opuE  720094 ..  720116 - -14.2  -4.57533   AACAAGAGCACAAAA           GCCACCAAGC TGC GCTTGATGGC           TTATTGCTTACTTTT 100 33
HCN55_RS03735  719291 ..  719316 - -13.4  -5.03994   GTGTAGATAGAAAAA         GCCAATGGGA TTCCAG TCCCATTGGC          TTTTATAATGTATCA 100 28
HCN55_RS03705  710027 ..  710066 - -13.9  -3.53224   GAGTCTTCTTCCAAA TAAA-AAACCGCCC-TGCC GTCT GGCAAGGGCGGTTTCTTTA  TGAAACAAATTGATG 100 23
HCN55_RS03685  706559 ..  706583 -   -13  -5.93809   TGGGCATAAAAAAAA          GCTTGATCAC GTTTT GTGATCAAGC          TTTTCCATTTATCCG 100 34
HCN55_RS03675  704711 ..  704729 - -11.7  -4.32651   AATAAGTGAGGAAAA             CCCGCAG AATAG CTGCGGG             TTTTTTGTTATCAAA  91 36
HCN55_RS03560 NONE
        gabP  678404 ..  678427 -   -14  -5.14949   AAGAAAATAACAAAA          TCCTAAACGG CAGG CCGTTTAGGA           TTTGATCAGCATTAA 100 37
        cotA  676718 ..  676736 -  -8.9  -5.72622   TTCATAAAGAAAAAA             CTTGCCT GCTAG AGGCAAG             TTTGTCGGGTTATTT 100 35
HCN55_RS03545 NONE
HCN55_RS03540 NONE
HCN55_RS03535  674399 ..  674423 -  -5.7  -5.53079   AAAACAGACAAAAAA          GCCCTAAAC GTTTACA GTTTTGGGC          TTCTTTCTTCGTATT  88 141
HCN55_RS03530  674164 ..  674185 - -10.1  -5.20534   ATTAACTAATAAAAA           CCACTCGGC ATGA GCTGAGTGG            CTTTTTTAATGGATG 100 31
        bdhA  671157 ..  671180 - -15.4   -5.1925   GGATAATTTAAAAAA          GAATCCGCAC CCGA GTGCGGATTC           TTTTTGGTTTCAAAT 100 40
HCN55_RS03505  668087 ..  668111 -   -10  -4.26589   ATCATACAGTGAAAA          GTCCGGAGTG ATCAG CACTCGGGAC          TTTTTTATTTAGGAG  86 30
        gutR  657979 ..  658012 -   -14  -4.45738   GACTTTAATAAGAAA     CGAAAGGCCAACTG CGACTT CAGTTGGCCTTTCC      TATTTATAATAAAGA 100 72
HCN55_RS03390 NONE
HCN55_RS03385  641996 ..  642019 - -12.6  -5.64873   GGCAATAATAAAAAA          TCCATTTCTC ATGC GAGAAATGGA           TTTTCTTTAATTTTG 100 32
HCN55_RS03360  637783 ..  637802 - -12.2  -4.82901   TTCTGTGGATAAAAA            GCACCTCT AAAA AGAGGTGC             TTGACTTTTTTAATC 100 35
        pbuE  618401 ..  618420 - -10.8  -5.72254   CTAAATAATAAAAAA            TCCTCCTT TTAC AAGGAGGA             TTTTTTTGCTGTTTG 100 14
HCN55_RS03235 NONE
HCN55_RS03230  615510 ..  615545 -  -4.2  -5.24551   GGAAATGAAGAAAAA    GGCATAACATAT GAGCTGTATAAA ATATGTTACGCC     TTTTCATTTGTCTAT  76 57
        phoB  613336 ..  613370 -  -7.9  -4.72272   TTCCTCCATTAAAAA     GAGATCCCGTTACTT CATAC AAGCAACGGGACACC     TTGTATTCTTTTACT  88 36
HCN55_RS03215  612573 ..  612599 - -19.6  -5.44198   AACAAATAAGAAAAA         GAACTCCCGTAC CTT GTACGGGAGTTC         TTGATTTAAAACTTG 100 31
HCN55_RS03195  608139 ..  608155 -  -8.7  -5.66684   GAATTCATAAAAAAA              CCTGACA TGA CGTCAGG              TTTTTTGTTTTATTT 100 39
HCN55_RS03185 NONE
HCN55_RS03180  605440 ..  605472 - -21.5  -4.65895   GGCTGTACTTAAAAA      CAAAGAGCCCGGAAA ACA TTCCCGGGCTCTTTG      TTTTATTTCCATTCT 100 28
HCN55_RS03165  601504 ..  601525 -   -13   -5.0133   TATTTCCCGAAAAAA           GCGGCTCC ATTTAG GGAGCCGC            TTTTTTATGCTTTTT 100 30
HCN55_RS03160  599946 ..  599972 - -11.7  -5.52384   TTTTCATCAAAAAAA        CTCCTGCTCTCA TTTT TGAG-GCAGGAG         TTTTGAGTCTTATTG 100 35
        vmlR  597974 ..  597991 -  -9.9   -5.4433   ACATATAAAGAAAAA             GGACAAC AGCT GTTGTCC              TTTTCAATGCCGCTT 100 53
HCN55_RS03135 NONE
HCN55_RS03130 NONE
        cotP  594630 ..  594640 -  -3.2  -4.37067   CAAATATGAGGAAAA                 TGCG TTA CACA                 CTTGATTATTTAAAT  62 409
HCN55_RS03115 NONE
HCN55_RS03110  593169 ..  593179 -  -5.4  -4.13945   ATTTTTACGCTAAAA                 GCTT GGA AAGC                 AGCTCTTGGATCGCA  65 4
HCN55_RS03105  592793 ..  592813 -  -9.7  -4.59944   ATCAGCAGAAATAAA            GCCGCCT GATAAAG AGGCGGC            AGATCGTTATATGTC  91 43
HCN55_RS03100  592369 ..  592384 -  -7.6  -5.57054   AATAAGGCAAAAAAA              GAACTC AAAT GAGTTC               TTTTTTTATTCTTCA 100 31
        mneP  588371 ..  588387 -  -7.3  -5.73978   AGCATAAAGAAAAAA              CTCCTTC TAA AAAGGAG              CTTTTCATTCTTCGA 100 30
HCN55_RS03070  587421 ..  587439 -  -5.3  -5.13354   TGCATAAAAAATAAA             CCCTCTA GTTAG TAGAGAG             TCAAGGGAGATCAAA  81 55
HCN55_RS03065  586639 ..  586653 -  -5.8  -2.56391   ACGATTGAAACAGAT               TATTGA AAA TCAATA               TAACAGAATATTAAC  54 62
HCN55_RS03060  585494 ..  585516 -  -9.2  -5.06414   TTTGTCCAAGAAAAA           TAGAGTCCAT AAG AGGGACTCTA           TTTTTTGAAGTGCCC 100 95
HCN55_RS03040 NONE
HCN55_RS03035  580434 ..  580444 -  -6.8  -2.90075   GCGGTTTGAATGACA                 GCTG TTT CAGC                 GTCTTTTGGAAAGAA  58 21
HCN55_RS03030  579848 ..  579859 -  -4.4  -3.66356   ATTTTGAAGCGGAAA                CATC AGAT GATG                 AGGCACGATATCTAG  57 77
HCN55_RS03020  578356 ..  578384 -  -3.2  -5.14563   TGTTTCACTAAAAAA        GAGATCAAGC CTAATGATC GCTTGATCTG        ATAATAACAAGGGTT  73 79
HCN55_RS03010  575788 ..  575809 - -11.7   -3.1169   AGAACCTTAAAAGGA           GATACCAAC CGAT GTTGGTATC            TTTTTTGTTTTAGAG  84 35
HCN55_RS02980  570228 ..  570251 -  -2.6  -3.34517   ATTTTTGGTGAAATA          CTTATTTC-TC TGT GATGAAATAAA          GCAAAGCGATGACCG  46 3
HCN55_RS02970  568956 ..  568981 -  -9.8   -4.1347   TCTGAATCACAGAAA         TACCAAGGGC GTCAAA ACCCTTGGTA          TTTTTTCTGGTTATT  86 39
HCN55_RS02960  567399 ..  567413 -  -2.7  -2.69468   TAGCTTTACATATGA               GGCCC TCCTT GTGCC               ATTCCCCACTTACAC  41 1
HCN55_RS02955  566691 ..  566707 - -10.8  -4.00468   ACGATAACTCAGAAA              GCCCGC TTTTC GCGGGC              TCGATTGAAGCAGAT  89 53
HCN55_RS02940  563582 ..  563606 - -11.5  -4.54047   CGATCGCATACAAAA          TACCAAGGGCC AGC AACCCTTGGTA          TTTTTATACCTTCAT  95 73
HCN55_RS02935  562289 ..  562308 -  -6.5  -5.24796   TCTATAGAAGAAAAA            CAAGCAT AGTAAG ATGCTTG             TTTTTTCTTAGGACA  86 290
HCN55_RS02910  556515 ..  556525 -  -5.4  -4.82901   GGTTCTTCATAAAAA                 GCTT GGA AAGC                 CTCTCTCCAAAAGAA  76 397
HCN55_RS02900  554431 ..  554453 -  -9.3  -4.28432   AAGGTTAATTGAAAA           GCAAACTAT ATAAA ATAGTTTGC           TTTTTTTTGTTATGA  86 369
        lrpB  545270 ..  545305 -    -4  -5.02476   ATATGCTCTAAAAAA    GCCCTAGGTTGG-ATAT GGA ATTTACCAAGCTGGGGC    CTTTTTATACATTAT  72 54
HCN55_RS02835  543415 ..  543462 - -10.2  -5.75342   TTCGTTCAAAAAAAA CTAAAGGGTGATACATATTA TACATGAT TAATATGTATCACCCTTTTC TTTTCTTGTTCAACA 100 85
HCN55_RS02815  539339 ..  539353 -  -4.4  -4.58644   AATTAAGAATGAAAA               TTATAA GGT TTATAA               GTTGGAAACTAAATC  68 118
HCN55_RS02715 NONE
        immA NONE
HCN55_RS02705  522707 ..  522732 -   -12  -2.77899   CGGCCGCATCAATGA         TACCAAGGGT TTTGAC ACCCTTGGTA          TTTTTTTGTGTTTAT  84 78
        cmpA  521185 ..  521204 -  -6.4  -5.09259   TATGGTAAAATAAAA            GCACTGCT TACG AGCAGTGT             TTTTTCCTATAGAAA  86 13
HCN55_RS02565  508236 ..  508280 - -19.7  -4.12902   CAATCACGCTGAAAA GATGACAAAATCCTAAAATGA AAA CCATTTTAGGATTTTGTCAAC TATCTGAAGCGGCGG 100 41
HCN55_RS02535  500962 ..  500989 -  -9.3  -5.26907   GAAGACAAAATAAAA        CATGAACACGA TGTCAC TCATGTTCATG         TTCATGTAGAGCCTG 100 69
        fbpA NONE
        fbpB  499584 ..  499598 -  -7.1  -5.96219   GAGTCATAAAAAAAA               GAGCC TTACC GGCTC               TTTTTATGTATTGTT 100 29
        dctB NONE
HCN55_RS02470  488989 ..  489011 -   -15  -4.01939   GAAGGCATAATCAAA           GCCCAAAACA TCA TGTTTTGGGC           TTGTCTCTTTACTCG 100 34
HCN55_RS02445  486211 ..  486224 -  -3.9  -3.87075   ATCACCTCTCATAAA               TGATT TACC AATCA                ATAACCGCTCCTGAT  56 70
HCN55_RS02440  485890 ..  485916 - -12.4  -4.96848   GGTCCCATATAAAAA         GACATCGTTTCA TTT CGAAACGATGCC         TCCTGTATCTAATGA 100 43
HCN55_RS02435  484399 ..  484427 - -13.3  -4.56597   GCTTTTGCGGAAAAA        TAAAAACCGGCTT TAG AAGCCGGTTTTTT        TATCGAAACGTATCT 100 25
HCN55_RS02430 NONE
HCN55_RS02425  483725 ..  483742 -  -4.1  -4.07568   CGCTTCCTGGCAAAA             TCACCTA CGGG CAGGCGA              AAGGCTTTAGCAAGT  59 109
HCN55_RS02370  468828 ..  468850 - -13.5  -4.44667   GGTTTTAATAAGAAA           GGCTGGATC ATAAA GATCCAGCC           TTTTTGCGCTTCCTT 100 39
HCN55_RS02340  464220 ..  464255 - -12.7  -4.45083   TGTACATTCATAAAA    GAAGAAGCCCGTCCAC TTTAT GTGG-CGGGCTTCTTT    GCAGTTGCACAGACG 100 7
HCN55_RS02315  456357 ..  456376 - -10.7  -4.53303   CAGTTTCATAGAAAA            CGCGCCT CATGAC AGGCGCG             TTTTTTATGTGTGAT  95 425
HCN55_RS02265  449025 ..  449048 -  -9.6  -5.85011   GAAAAATGAAAAAAA          CCCTTCACAA CATT TTGTGAGGGG           TTCTATTTTGTGTCG 100 28
HCN55_RS02255  447551 ..  447562 -  -5.8   -4.9218   CATTCATGACAAAAA                GAGC GGCC GCTC                 ATTTGTCAAACGTTT  78 395
        ycnK NONE
        ycnJ NONE
HCN55_RS02210  439419 ..  439445 - -11.6  -5.19879   GGTTAAACATAAAAA         GCGACCCAGACA TGA CATCTGGATCGC         TTTCTTTATTAGGCA 100 34
        gabR  433107 ..  433133 -  -2.3  -5.85244   AAGCAAAAGAAAAAA        CGTGCAGCACCT GTGC AGATG-TGCAGG         TTGCCAAATCGACTT  91 197
HCN55_RS02175 NONE
        nfsA  431761 ..  431785 - -17.9  -4.06055   ACCGGGTAAATGAAA          GGCCTGCCGGA AAA TCCGACAGGCC          GAATAAGAGCTTATT 100 36
HCN55_RS02165  430769 ..  430779 -    -4  -2.57354   CTAAGTAATTAACAG                 TGTT TTT AACA                 TGGAAACGGGCTGTG  45 0
HCN55_RS02160  429279 ..  429303 - -12.2  -5.13016   AAGTAAAACCAAAAA         GAGCCTCCGCT AAAT AGCGG-GGCTC          TTTTTTTGTTAATCA 100 38
HCN55_RS02135  423870 ..  423891 - -15.9  -5.71712   GGTGATATAAAAAAA           TAGCGGGCG CTGC CGCCCGCTA            TTTATGTACGATTAA 100 37
HCN55_RS02130  423599 ..  423611 -  -3.4  -4.12942   GCAAATGCTGCAAAA                CTGT GGCGG ACAG                GGTCCCGCAGAGACG  57 50
HCN55_RS02125  423415 ..  423439 - -18.7  -5.40072   TTCTTTTCAAAAAAA          CACCGCAAGAC ATA GTCTTGCGGTG          CCGCCTTCATGGAGA 100 51
HCN55_RS02100 NONE
HCN55_RS02095  417381 ..  417423 -  -7.8  -5.65513   GAGGAAGCAAAAAAA TGATAAAAAGAGCGGGGG GATGCGG CCGCCGCTCTTTTTATGT TCACTTCTATATAAA 100 90
HCN55_RS02075  412605 ..  412633 -  -7.4  -2.71144   GACGCGTTTGAAGCA        GTGCCGGAATCA TATTC TGTTTCCGTCAC        AAACAATGCCGGCGC  58 435
HCN55_RS02065  409479 ..  409506 - -17.8   -5.5112   TTGATCAATAAAAAA        CAGCCCGCAGAT CAAC ATCCGCGGGCTG         TTTCTGATTATAAGA 100 33
        bsdA  404784 ..  404800 -  -2.3  -5.65927   TATTGAAATAAAAAA              TTAGCTT ACA AATCTAA              AGGATAACTTTTTTT  80 82
        tcyA NONE
        tcyB NONE
        tcyC  402408 ..  402448 - -18.7  -4.12902   CAATCACGCTGAAAA  TCACAAAATCCTAAAACGA ATA TCGTTTTAGGATTTTGTCA  ATAATCTGAAACAGG 100 64
HCN55_RS02015  401498 ..  401516 -  -9.6  -6.14618   GAGAAAATAAAAAAA             CAAAGCCA AGG CGGCTTTG             TTTTAGTGTACAGGC 100 28
HCN55_RS02000 NONE
HCN55_RS01995  397720 ..  397754 - -13.8  -3.10975   ACCCACCATTCAATA     TAAAAGGATCAGCACT GTC AATGCTGATCCTTTTT     AAATTTGAGTTTTTT 100 8
        hxlA NONE
        hxlB  367852 ..  367872 - -16.9  -5.49579   TTAGAAAAAATAAAA            CCGGCCTGA TCT TCAGGCCGG            TTGTGTGATGCTATT 100 36
HCN55_RS01950  366051 ..  366069 -  -5.3  -2.59458   AATGATAGTAAGTCA            TC-AGCCG TTTT CGGCTTGA             TTAATCATTTTAAAT  51 7
        nucA NONE
         nin  364977 ..  365001 -   -10  -2.73034   AAAGTTTATAAAGAG          TCCCTGAGAG TTATT CTCTCAGGGG          TTTTTCATTACACAG  74 33
HCN55_RS01915  361283 ..  361299 -  -5.1  -2.97475   CGTCCGATTACAAAT              CAACGTC CTG AACGTCG              GCATCAATTTTTTTT  52 1
HCN55_RS01910  360544 ..  360563 - -11.4  -5.82172   ATCAATAGAAAAAAA            GCCGTCCC ATGG GGAACGGC             TTTTTTTAATGAAAC 100 47
        nasB NONE
        nasC  351570 ..  351580 -  -2.6  -4.66264   GAAAAGTTCTAAAAA                 TTTT ATG AAAA                 ATTTAAATAGGTATG  62 28
        nasD NONE
        nirD  348661 ..  348681 -  -7.6  -3.93769   ACTGTAAAAAATGAA            GGACCACT AGAAA AGTGATCC            GGTCTTTTGATCAAT  74 36
        cobA  347151 ..  347172 - -10.2  -4.99043   GGTGCATAAATAAAA           CAGCCCTT GAGGAA AAGGGCTG            CTTGCCATCAGGTGT 100 33
HCN55_RS01850  345008 ..  345027 -  -3.6  -3.94438   CAGCTGAAGAAAAGA            TGATTGTG CTGT CACAATAA             AACCTCCGCTCATGT  56 120
HCN55_RS01845 NONE
HCN55_RS01840  343244 ..  343267 - -12.6  -5.88476   AAAAGAAATAAAAAA          GAAACCAGTA CTTG TACTGGTTTC           GTCTTCACTTAAAAT 100 34
HCN55_RS01800  333869 ..  333887 -   -16  -4.66609   CAGCCGATGTAAAAA             GCCGTGCG CAG CGCACGGC             TTTTTTTATCGTTTT 100 31
        tmrB  332397 ..  332415 -   -16  -4.22591   AATAAGTTGAAGAAA             GCCCGCTC TCG GAGCGGGC             TTTTGTCGTGTACAG 100 46
HCN55_RS01775  328994 ..  329013 - -13.6  -3.30412   AAGACGAAAAAGAAT            GGCCGGAA GACA TTCCGGCC             GATCCTGAGCATTAT 100 384
HCN55_RS01755  325686 ..  325710 - -17.3  -5.47159   GTGTAATAGAAAAAA          GCAGTACATGC CCA GCATGTACTGC          TTTTTTTATGTTAAT 100 36
HCN55_RS01705  313695 ..  313709 -  -4.2  -4.61868   TATGTATAGAGAAAA               CCCTTT GTT AGAGGG               TTTCCAAAAAGCCAG  68 18
HCN55_RS01700  312214 ..  312233 - -12.2  -4.46656   GCTAGAATAGGAAAA            GCACCTCT TAAA AGAGGTGC             TTTCAGCGTGTCGAC 100 253
HCN55_RS01660  304132 ..  304155 -   -14  -4.46656   CCGATAACATGAAAA          GCAGTTTTCC CTAG GGAAAACTGC           TTTTTTTATAGAAAC 100 31
        cwlK  296991 ..  297009 -  -4.5  -2.63596   CCTGATTTTACAGCA             GGCAGTG ACCAG CACTGCA             AACTTGTCTATAAGC  46 101
HCN55_RS01610 NONE
HCN55_RS01605  292684 ..  292708 -   -13  -5.63517   TTTTCAAATAAAAAA          GGAAATAGCC GTCAT GGCTATTTCC          TTTTGGTGTTTTATT 100 36
        natR NONE
        natK  287866 ..  287890 - -15.9   -5.1925   TCATAATGGAAAAAA          CCTTGAAAAGC CAG GCTTTTCAAGG          TTTTTTTAATTCTGA 100 31
HCN55_RS01570  286137 ..  286161 - -14.5  -5.34655   TAATGAAAAACAAAA          CCTTGAAGAAT GCT ATTCTTCAAGG          TTATTCTGCTTTCAG 100 26
        lmrA NONE
      lmr(B)  281903 ..  281925 - -10.6    -4.946   AGTAAACATGAAAAA           GCCCCTGA ACACTAG TCAGGGGC           TTTTCATATTAATGA 100 34
         pcp  280043 ..  280053 -  -8.2  -3.70709   ATGAGGGAAGAAACA                 GCGG CGG CCGC                 TTAGTGCAGCGTACC  74 26
HCN55_RS01505 NONE
HCN55_RS01500 NONE
HCN55_RS01420 NONE
HCN55_RS01415  255974 ..  256012 - -11.1  -4.86939   CAATAAACGCAAAAA   GAGAAAGGTGTTCAGCC CATAT GTCTGAACACCCTTTTC   TTATGATATTTGTTT 100 26
        mmuM  254864 ..  254888 -  -9.4   -5.4505   CTTCCTAATAAAAAA          TCTCATGTCA GAAAG TGACACGAGA          CTCCGGCGAACCGGC 100 74
        mmuP  253379 ..  253400 - -14.5  -4.87318   GTGAAAATCGAAAAA           GAACCTGCC CGGA GGCAGGTTC            TTTTTATTTTGAATG 100 29
        nagB NONE
HCN55_RS01375  248163 ..  248183 -  -9.7  -4.57073   TATGTTGGCGAAAAA            GTCCCCC GCAGCAG GGGGGAC            TTTTTTACTTCATTT  91 30
HCN55_RS01370  246769 ..  246791 - -12.1   -5.7946   TGCTGAATAAAAAAA           GAACACCTC GTATT GAGGTGTTC           TTTTTTTCTATATGC 100 33
HCN55_RS01310 NONE
HCN55_RS01305  235189 ..  235208 -  -8.6  -6.14618   GACAAAATAAAAAAA            TGGATGCC GTTA AGCATCCA             TTTTACATCCGTTCT 100 15
HCN55_RS01300  232878 ..  232911 -  -8.3  -5.75822   GATAAACTAAAAAAA     CTGCATGAGCATA TTTTAACT TATGTTCATGCAG      TTTTGTATTAAAGTT 100 39
HCN55_RS01295  231427 ..  231458 -  -7.4  -3.90286   GAGGACAAAGGGAAA      GCATCTCTGATT TCGAGATT ATTCAGAGATGC       TTTTTTTGTATTTTT  71 492
        glpT NONE
HCN55_RS01270  226263 ..  226284 - -10.2  -4.91357   AAATATAGAAGAAAA           CCTTGCGA TAGTTG TCGCAAGG            TTTTTTGCTTTTAAT 100 36
HCN55_RS01260  224068 ..  224092 - -10.1  -5.01042   AAGTTAAATTAAAAA          GCTCTCTTC CTTTATC GAAGAGAGC          TTTTTGATTACTTCT 100 33
      blaOXA  221799 ..  221827 -  -7.3  -2.82516   GTTTTGAGCATGAGA        TTTAGAGCCCTGC CGT GCAGGGCTCTTTT        ATTTAGGATGTAATC  61 28
HCN55_RS01225  217330 ..  217347 - -12.7  -5.56673   ACGGAGAATAAAAAA             GAGCCGG ATAA CCGGCTC              GGTATAAGTTAAAAC 100 34
HCN55_RS01220  216117 ..  216131 -  -4.2  -2.81642   AGATTATTGAGGATA               CATGCA GGC TGCTTG               CGATTACTTATGAGC  45 394
        alkA  195666 ..  195678 -  -5.5  -3.90318   TTAGCATGCTAGAAA                TCCGA AAA CCGGA                GAGCCTATTGGAATG  63 175
HCN55_RS01045 NONE
HCN55_RS01040 NONE
        murQ NONE
HCN55_RS01030 NONE
HCN55_RS01025 NONE
        amiE  181653 ..  181665 -  -4.1  -2.56011   TAAGCGGAAAGACAG                GTCTC ATA GAAAC                TTCCTCCTATCGTCT  45 47
        nagZ NONE
HCN55_RS01010  178396 ..  178421 -  -9.1  -5.55664   TTAGCATGAAAAAAA         CCCTTACTTAT GTGT AAAAGTAAGGG          TCTTTCGTTCAATAA 100 77
         btr  176671 ..  176698 -  -2.9  -3.42083   TGAACAGATATAACA        CCATGGACAAAT TCCTG ATTTAT-CATGG        ACAATCTCCGGATAG  46 20
        feuA NONE
HCN55_RS00995 NONE
HCN55_RS00990 NONE
HCN55_RS00985  172870 ..  172889 -  -9.3  -5.66684   GAAGGCATAAAAAAA            CCGCTCA TAGGGT TGAGCGG             TTTTTTCCGTATAGC 100 10
        pdaB  152875 ..  152889 -  -2.8  -3.23921   TATAAAGCAAAAGCA               GTCCTC TAA GAAAAC               ATTTGTGTCATCGTT  45 186
        gerD  151752 ..  151782 -  -7.5  -4.87665   GTGCAGGTATAAAAA       GGTGAACCGGGAT TCCAG ATCCCGGCTTTCC       CTTTATTCACTTTCT  88 32
        abrB   38075 ..   38098 -  -9.7  -5.87996   TAAGCAATAAAAAAA          CGTTCTTGT GTCATA ACAAGAACG           TTTTTTGTACAAGAA 100 45
HCN55_RS00065   14855 ..   14873 - -14.6  -3.69434   CCAAGCAAGCTTAAA             CCCAGCTC AAT GAGCTGGG             TTTTTTGTTTGTTAA 100 37
