locus-tag	class	description
CAB88_RS00070	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CAB88_RS00075	COG4856	YbbR-like protein
CAB88_RS00115	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS00120	COG2011	ABC-type metal ion transport system permease component
CAB88_RS00125	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CAB88_RS00130	COG1464	Belongs to the NlpA lipoprotein family
CAB88_RS00135	COG0604	alcohol dehydrogenase
CAB88_RS00145	COG0277	FAD linked oxidase domain protein
CAB88_RS00150	COG2271	Major facilitator Superfamily
CAB88_RS00160	COG2814	Major facilitator Superfamily
CAB88_RS00180	COG0601	transmembrane transport
CAB88_RS00190	COG0444	Belongs to the ABC transporter superfamily
CAB88_RS00195	COG4608	Belongs to the ABC transporter superfamily
CAB88_RS00200	COG4166	transmembrane transport
CAB88_RS00215	COG4166	transmembrane transport
CAB88_RS00220	COG4166	transmembrane transport
CAB88_RS00225	COG0656	L-ascorbic acid biosynthetic process
CAB88_RS00250	COG4149	molybdate abc transporter
CAB88_RS00255	COG0725	ABC transporter, periplasmic molybdate-binding protein
CAB88_RS00260	COG1910	domain protein
CAB88_RS00280	COG0697	spore germination
CAB88_RS00295	COG0204	Acyl-transferase
CAB88_RS00310	COG1609	Transcriptional regulator
CAB88_RS00320	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_RS00340	COG5298	Protein conserved in bacteria
CAB88_RS00365	COG0488	(ABC) transporter
CAB88_RS00380	COG0747	negative chemotaxis
CAB88_RS00385	COG0601	transmembrane transport
CAB88_RS00390	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CAB88_RS00395	COG0444	Belongs to the ABC transporter superfamily
CAB88_RS00400	COG4608	Belongs to the ABC transporter superfamily
CAB88_RS00405	COG0561	phosphatase activity
CAB88_RS00435	COG3185	4-Hydroxyphenylpyruvate dioxygenase
CAB88_RS00440	COG0179	Fumarylacetoacetate (FAA) hydrolase
CAB88_RS00450	COG0531	amino acid
CAB88_RS00460	COG2814	Major facilitator Superfamily
CAB88_RS00470	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CAB88_RS00480	COG4294	response to UV
CAB88_RS00485	COG0705	Rhomboid family
CAB88_RS00495	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CAB88_RS00500	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CAB88_RS00505	COG0864	Transcriptional regulator
CAB88_RS00510	COG2337	Toxic component of a toxin-antitoxin (TA) module
CAB88_RS00515	COG2183	response to ionizing radiation
CAB88_RS00615	COG0802	atpase or kinase
CAB88_RS00620	COG1214	PFAM Peptidase M22, glycoprotease
CAB88_RS00625	COG0456	acetyltransferase
CAB88_RS00635	COG0488	(ABC) transporter
CAB88_RS00650	COG1266	CAAX protease self-immunity
CAB88_RS00680	COG2252	PERMEase
CAB88_RS00690	COG5002	protein histidine kinase activity
CAB88_RS00715	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CAB88_RS00770	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CAB88_RS00780	COG1215	transferase activity, transferring glycosyl groups
CAB88_RS00800	COG0697	spore germination
CAB88_RS00830	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CAB88_RS00835	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CAB88_RS00840	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CAB88_RS00850	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CAB88_RS00865	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CAB88_RS00875	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CAB88_RS00885	COG0151	Belongs to the GarS family
CAB88_RS00895	COG0583	DNA-binding transcription factor activity
CAB88_RS00920	COG0210	DNA helicase
CAB88_RS00930	COG4851	CamS sex pheromone cAM373 precursor
CAB88_RS00945	COG1335	isochorismatase
CAB88_RS00955	COG2011	ABC-type metal ion transport system permease component
CAB88_RS00960	COG1464	Belongs to the NlpA lipoprotein family
CAB88_RS00975	COG0003	Pfam Anion-transporting ATPase
CAB88_RS00980	COG1846	Transcriptional regulator
CAB88_RS00985	COG4682	membrane
CAB88_RS01005	COG1597	lipid kinase activity
CAB88_RS01010	COG0546	phosphoglycolate phosphatase activity
CAB88_RS01015	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CAB88_RS01025	COG1012	belongs to the aldehyde dehydrogenase family
CAB88_RS01030	COG2076	Multidrug Resistance protein
CAB88_RS01040	COG2309	aminopeptidase activity
CAB88_RS01055	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CAB88_RS01065	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CAB88_RS01070	COG4807	Protein conserved in bacteria
CAB88_RS01095	COG1757	Na H antiporter
CAB88_RS01100	COG1473	amidohydrolase
CAB88_RS01120	COG0450	alkyl hydroperoxide reductase
CAB88_RS01140	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_RS01145	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_RS01150	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CAB88_RS01160	COG0492	ferredoxin-NADP+ reductase activity
CAB88_RS01175	COG0166	Belongs to the GPI family
CAB88_RS01205	COG5002	protein histidine kinase activity
CAB88_RS01225	COG3541	Predicted nucleotidyltransferase
CAB88_RS01230	COG2814	Major facilitator Superfamily
CAB88_RS01235	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CAB88_RS01235	COG0723	plastoquinol--plastocyanin reductase activity
CAB88_RS01245	COG0765	amino acid transport
CAB88_RS01250	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CAB88_RS01260	COG0840	transmembrane signaling receptor activity
CAB88_RS01285	COG0549	Belongs to the carbamate kinase family
CAB88_RS01290	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CAB88_RS01300	COG0277	FAD linked oxidase domain protein
CAB88_RS01305	COG0366	Alpha amylase catalytic
CAB88_RS01310	COG1263	PTS System
CAB88_RS01310	COG2190	(PTS) system
CAB88_RS01310	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CAB88_RS01340	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CAB88_RS01360	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CAB88_RS01365	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CAB88_RS01370	COG1116	anion transmembrane transporter activity
CAB88_RS01375	COG0488	(ABC) transporter
CAB88_RS01425	COG2270	Major facilitator Superfamily
CAB88_RS01455	COG2310	stress, protein
CAB88_RS01460	COG2310	stress, protein
CAB88_RS01465	COG2310	stress, protein
CAB88_RS01470	COG0861	Integral membrane protein TerC family
CAB88_RS01480	COG3853	Toxic anion resistance protein (TelA)
CAB88_RS01495	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CAB88_RS01505	COG1295	ribonuclease BN
CAB88_RS01515	COG2217	Heavy metal translocating P-type atpase
CAB88_RS01520	COG0697	spore germination
CAB88_RS01540	COG0586	Pfam SNARE associated Golgi protein
CAB88_RS01555	COG3871	stress protein (general stress protein 26)
CAB88_RS01560	COG0387	Pfam Sodium calcium exchanger
CAB88_RS01570	COG0535	radical SAM domain protein
CAB88_RS01590	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CAB88_RS01595	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CAB88_RS01610	COG3829	transcription factor binding
CAB88_RS01620	COG0833	amino acid
CAB88_RS01625	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CAB88_RS01655	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CAB88_RS01655	COG1263	PTS System
CAB88_RS01660	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CAB88_RS01675	COG1216	Glycosyl transferase, family 2
CAB88_RS01685	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CAB88_RS01685	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CAB88_RS01690	COG0463	Glycosyl transferase, family 2
CAB88_RS01705	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CAB88_RS01725	COG1228	amidohydrolase
CAB88_RS01730	COG1090	epimerase
CAB88_RS01760	COG1988	membrane-bound metal-dependent
CAB88_RS01765	COG1194	a g-specific adenine glycosylase
CAB88_RS01785	COG3557	Belongs to the UPF0374 family
CAB88_RS01790	COG1132	(ABC) transporter
CAB88_RS01795	COG4129	membrane
CAB88_RS01800	COG0069	glutamate synthase activity
CAB88_RS01800	COG0067	glutamate synthase
CAB88_RS01800	COG0070	glutamate synthase
CAB88_RS01810	COG4555	ABC transporter
CAB88_RS01830	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CAB88_RS01835	COG0735	belongs to the Fur family
CAB88_RS01960	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CAB88_RS01985	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CAB88_RS02000	COG2766	serine protein kinase
CAB88_RS02025	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CAB88_RS02035	COG1585	Membrane protein implicated in regulation of membrane protease activity
CAB88_RS02040	COG2268	Band 7 protein
CAB88_RS02050	COG3290	protein histidine kinase activity
CAB88_RS02055	COG4565	transcriptional regulatory protein
CAB88_RS02060	COG2851	Citrate transporter
CAB88_RS02085	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CAB88_RS02090	COG3842	ATPase activity
CAB88_RS02095	COG1175	transmembrane transport
CAB88_RS02100	COG0395	ABC-type sugar transport system, permease component
CAB88_RS02110	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CAB88_RS02115	COG0745	RESPONSE REGULATOR receiver
CAB88_RS02120	COG5002	protein histidine kinase activity
CAB88_RS02130	COG4990	cell redox homeostasis
CAB88_RS02140	COG3290	protein histidine kinase activity
CAB88_RS02145	COG4565	transcriptional regulatory protein
CAB88_RS02150	COG3493	citrate carrier protein
CAB88_RS02155	COG0281	malic enzyme
CAB88_RS02165	COG0697	spore germination
CAB88_RS02170	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_RS02180	COG5002	protein histidine kinase activity
CAB88_RS02185	COG0745	RESPONSE REGULATOR receiver
CAB88_RS02195	COG0454	-acetyltransferase
CAB88_RS02195	COG0456	acetyltransferase
CAB88_RS02200	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CAB88_RS02205	COG3383	formate dehydrogenase (NAD+) activity
CAB88_RS02210	COG2427	Protein of unknown function (DUF1641)
CAB88_RS02225	COG0531	amino acid
CAB88_RS02230	COG0640	Transcriptional regulator
CAB88_RS02235	COG2217	Heavy metal translocating P-type atpase
CAB88_RS02240	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CAB88_RS02255	COG3227	Zinc metalloprotease (Elastase)
CAB88_RS02275	COG2720	vancomycin resistance protein
CAB88_RS02280	COG1316	TRANSCRIPTIONal
CAB88_RS02285	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CAB88_RS02290	COG0346	lactoylglutathione lyase activity
CAB88_RS02295	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_RS02305	COG1253	flavin adenine dinucleotide binding
CAB88_RS02310	COG1027	Aspartate ammonia-lyase
CAB88_RS02315	COG1620	l-lactate permease
CAB88_RS02335	COG3104	oligopeptide transport
CAB88_RS02340	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CAB88_RS02345	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_RS02350	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_RS02370	COG3344	reverse transcriptase
CAB88_RS02375	COG0156	8-amino-7-oxononanoate synthase activity
CAB88_RS02380	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CAB88_RS02390	COG4548	von Willebrand factor, type A
CAB88_RS02395	COG0714	Associated with various cellular activities
CAB88_RS02420	COG0531	amino acid
CAB88_RS02425	COG2188	Transcriptional regulator
CAB88_RS02430	COG1263	PTS System
CAB88_RS02430	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CAB88_RS02435	COG0366	Alpha amylase catalytic
CAB88_RS02455	COG0697	spore germination
CAB88_RS02465	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CAB88_RS02470	COG1115	amino acid carrier protein
CAB88_RS02475	COG1126	abc transporter atp-binding protein
CAB88_RS02480	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CAB88_RS02485	COG0765	amino acid transport
CAB88_RS02490	COG0765	amino acid transport
CAB88_RS02495	COG0833	amino acid
CAB88_RS02510	COG1595	DNA-templated transcription, initiation
CAB88_RS02520	COG2378	regulation of single-species biofilm formation
CAB88_RS02525	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CAB88_RS02530	COG5002	protein histidine kinase activity
CAB88_RS02555	COG0659	secondary active sulfate transmembrane transporter activity
CAB88_RS02570	COG0747	negative chemotaxis
CAB88_RS02580	COG0601	transmembrane transport
CAB88_RS02585	COG4608	Belongs to the ABC transporter superfamily
CAB88_RS02595	COG2271	Major facilitator Superfamily
CAB88_RS02600	COG1846	Transcriptional regulator
CAB88_RS02605	COG0477	Major facilitator Superfamily
CAB88_RS02610	COG1609	Transcriptional regulator
CAB88_RS02615	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CAB88_RS02630	COG1172	Belongs to the binding-protein-dependent transport system permease family
CAB88_RS02635	COG1879	ABC-type sugar transport system periplasmic component
CAB88_RS02660	COG1063	alcohol dehydrogenase
CAB88_RS02690	COG1396	sequence-specific DNA binding
CAB88_RS02730	COG5377	YqaJ viral recombinase family
CAB88_RS02735	COG3723	Recombinational DNA repair protein, rece pathway
CAB88_RS02750	COG1484	DNA-dependent DNA replication
CAB88_RS02790	COG3617	BRO family, N-terminal domain
CAB88_RS02815	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CAB88_RS02910	COG1388	LysM domain
CAB88_RS02910	COG3409	Peptidoglycan-binding domain 1 protein
CAB88_RS02910	COG5632	N-Acetylmuramoyl-L-alanine amidase
CAB88_RS02930	COG1674	ftsk spoiiie
CAB88_RS02975	COG0840	transmembrane signaling receptor activity
CAB88_RS02980	COG1388	LysM domain
CAB88_RS02980	COG3584	3D domain protein
CAB88_RS02985	COG1476	TRANSCRIPTIONal
CAB88_RS03005	COG3104	oligopeptide transport
CAB88_RS03010	COG1114	Component of the transport system for branched-chain amino acids
CAB88_RS03025	COG1113	amino acid transport
CAB88_RS03030	COG2252	PERMEase
CAB88_RS03045	COG2153	protein acetylation
CAB88_RS03055	COG0569	domain protein
CAB88_RS03055	COG0475	glutathione-regulated potassium exporter activity
CAB88_RS03065	COG1845	cytochrome c oxidase, subunit III
CAB88_RS03070	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CAB88_RS03080	COG0833	amino acid
CAB88_RS03085	COG4990	cell redox homeostasis
CAB88_RS03100	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CAB88_RS03105	COG0697	spore germination
CAB88_RS03110	COG0531	amino acid
CAB88_RS03140	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CAB88_RS03145	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CAB88_RS03150	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CAB88_RS03150	COG1918	ferrous iron import across plasma membrane
CAB88_RS03155	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CAB88_RS03160	COG0573	inorganic phosphate transmembrane transporter activity
CAB88_RS03165	COG0581	inorganic phosphate transmembrane transporter activity
CAB88_RS03175	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CAB88_RS03300	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
CAB88_RS03325	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CAB88_RS03330	COG1116	anion transmembrane transporter activity
CAB88_RS03335	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CAB88_RS03340	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CAB88_RS03345	COG0352	thiamine-phosphate diphosphorylase activity
CAB88_RS03350	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CAB88_RS03355	COG2104	thiamine diphosphate biosynthetic process
CAB88_RS03365	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CAB88_RS03370	COG0351	phosphomethylpyrimidine kinase
CAB88_RS03415	COG2205	protein histidine kinase activity
CAB88_RS03420	COG2814	Major facilitator Superfamily
CAB88_RS03425	COG1846	Transcriptional regulator
CAB88_RS03440	COG2252	PERMEase
CAB88_RS03445	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS03460	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CAB88_RS03465	COG1621	beta-fructofuranosidase activity
CAB88_RS03470	COG1263	PTS System
CAB88_RS03470	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CAB88_RS03475	COG1609	Transcriptional regulator
CAB88_RS03525	COG0778	Nitroreductase
CAB88_RS03530	COG2719	SpoVR family
CAB88_RS03540	COG1414	Transcriptional regulator
CAB88_RS03560	COG0446	pyridine nucleotide-disulphide oxidoreductase
CAB88_RS03565	COG1937	Protein conserved in bacteria
CAB88_RS03570	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CAB88_RS03570	COG0425	Belongs to the sulfur carrier protein TusA family
CAB88_RS03575	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CAB88_RS03575	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_RS03580	COG0425	Belongs to the sulfur carrier protein TusA family
CAB88_RS03585	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CAB88_RS03595	COG2210	Belongs to the sulfur carrier protein TusA family
CAB88_RS03600	COG0730	response to heat
CAB88_RS03610	COG1316	TRANSCRIPTIONal
CAB88_RS03615	COG0604	alcohol dehydrogenase
CAB88_RS03620	COG1283	sodium-dependent phosphate transmembrane transporter activity
CAB88_RS03640	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CAB88_RS03640	COG3711	transcriptional antiterminator
CAB88_RS03645	COG1447	Phosphotransferase system cellobiose-specific component IIA
CAB88_RS03650	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CAB88_RS03670	COG3584	3D domain protein
CAB88_RS03670	COG1388	LysM domain
CAB88_RS03675	COG0577	efflux transmembrane transporter activity
CAB88_RS03680	COG1136	(ABC) transporter
CAB88_RS03690	COG5522	Integral membrane protein (intg_mem_TP0381)
CAB88_RS03705	COG1114	Component of the transport system for branched-chain amino acids
CAB88_RS03710	COG3546	catalase activity
CAB88_RS03745	COG0586	Pfam SNARE associated Golgi protein
CAB88_RS03780	COG0531	amino acid
CAB88_RS03785	COG0475	glutathione-regulated potassium exporter activity
CAB88_RS03795	COG1737	Transcriptional regulator
CAB88_RS03805	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CAB88_RS03805	COG1263	PTS System
CAB88_RS03815	COG2259	Doxx family
CAB88_RS03835	COG1522	sequence-specific DNA binding
CAB88_RS03840	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CAB88_RS03840	COG0165	Argininosuccinate lyase
CAB88_RS03845	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS03865	COG1309	transcriptional regulator
CAB88_RS03870	COG2814	Major facilitator Superfamily
CAB88_RS03875	COG1733	regulation of RNA biosynthetic process
CAB88_RS03890	COG4533	DNA binding
CAB88_RS03895	COG2211	Major facilitator Superfamily
CAB88_RS03905	COG0693	protein deglycase activity
CAB88_RS03910	COG0753	catalase activity
CAB88_RS03910	COG0693	protein deglycase activity
CAB88_RS03920	COG0531	amino acid
CAB88_RS03935	COG1012	belongs to the aldehyde dehydrogenase family
CAB88_RS03955	COG1132	(ABC) transporter
CAB88_RS03960	COG1132	(ABC) transporter
CAB88_RS03970	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CAB88_RS03975	COG0765	amino acid transport
CAB88_RS03980	COG1126	abc transporter atp-binding protein
CAB88_RS03995	COG0189	ligase activity
CAB88_RS04030	COG0028	Belongs to the TPP enzyme family
CAB88_RS04035	COG3527	Alpha-acetolactate decarboxylase
CAB88_RS04050	COG0561	phosphatase activity
CAB88_RS04060	COG3409	Peptidoglycan-binding domain 1 protein
CAB88_RS04060	COG5632	N-Acetylmuramoyl-L-alanine amidase
CAB88_RS04065	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CAB88_RS04070	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_RS04085	COG0659	secondary active sulfate transmembrane transporter activity
CAB88_RS04090	COG2244	polysaccharide biosynthetic process
CAB88_RS04115	COG1024	Enoyl-CoA hydratase
CAB88_RS04135	COG1363	Peptidase, m42
CAB88_RS04175	COG0601	transmembrane transport
CAB88_RS04180	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CAB88_RS04185	COG0444	Belongs to the ABC transporter superfamily
CAB88_RS04190	COG4608	Belongs to the ABC transporter superfamily
CAB88_RS04220	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_RS04245	COG0477	Major facilitator Superfamily
CAB88_RS04250	COG3290	protein histidine kinase activity
CAB88_RS04255	COG4565	transcriptional regulatory protein
CAB88_RS04260	COG3181	Tripartite tricarboxylate transporter family receptor
CAB88_RS04265	COG0494	nUDIX hydrolase
CAB88_RS04280	COG0305	Participates in initiation and elongation during chromosome replication
CAB88_RS04320	COG0477	Major facilitator Superfamily
CAB88_RS04355	COG1073	alpha beta
CAB88_RS04410	COG1183	phosphatidylcholine synthase activity
CAB88_RS04425	COG2814	Major facilitator Superfamily
CAB88_RS04430	COG0640	Transcriptional regulator
CAB88_RS04445	COG2376	Dihydroxyacetone kinase
CAB88_RS04455	COG2376	Dihydroxyacetone kinase
CAB88_RS04510	COG0457	Tetratricopeptide repeat
CAB88_RS04520	COG2373	Large extracellular alpha-helical protein
CAB88_RS04555	COG0596	Alpha beta hydrolase
CAB88_RS04585	COG3237	CsbD-like
CAB88_RS04615	COG1191	sigma factor activity
CAB88_RS04625	COG2208	phosphoserine phosphatase activity
CAB88_RS04630	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CAB88_RS04635	COG2198	Histidine kinase
CAB88_RS04635	COG2205	protein histidine kinase activity
CAB88_RS04635	COG0784	Response regulator, receiver
CAB88_RS04675	COG3344	reverse transcriptase
CAB88_RS04685	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
CAB88_RS04705	COG0420	3'-5' exonuclease activity
CAB88_RS04710	COG4717	serine-type aminopeptidase activity
CAB88_RS04730	COG1280	lysine exporter protein (LysE YggA)
CAB88_RS04735	COG0346	lactoylglutathione lyase activity
CAB88_RS04740	COG0346	lactoylglutathione lyase activity
CAB88_RS04750	COG0457	Tetratricopeptide repeat
CAB88_RS04760	COG2267	carboxylic ester hydrolase activity
CAB88_RS04785	COG2140	Oxalate decarboxylase
CAB88_RS04790	COG3620	sequence-specific DNA binding
CAB88_RS04795	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CAB88_RS04800	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CAB88_RS04810	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CAB88_RS04815	COG1695	Transcriptional regulator
CAB88_RS04830	COG1595	DNA-templated transcription, initiation
CAB88_RS04845	COG3973	AAA domain
CAB88_RS04880	COG4980	gas vesicle protein
CAB88_RS04885	COG0537	adenosine 5'-monophosphoramidase activity
CAB88_RS04895	COG1131	(ABC) transporter
CAB88_RS04900	COG4473	ABC transporter
CAB88_RS04945	COG1309	transcriptional regulator
CAB88_RS04955	COG3402	PFAM membrane-flanked domain
CAB88_RS04960	COG3428	Bacterial PH domain
CAB88_RS05005	COG0697	spore germination
CAB88_RS05010	COG3402	PFAM membrane-flanked domain
CAB88_RS05015	COG3428	Bacterial PH domain
CAB88_RS05020	COG2329	Antibiotic biosynthesis monooxygenase
CAB88_RS05025	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CAB88_RS05040	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CAB88_RS05075	COG1309	transcriptional regulator
CAB88_RS05080	COG1511	domain protein
CAB88_RS05100	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_RS05105	COG1609	Transcriptional regulator
CAB88_RS05115	COG1234	tRNA 3'-trailer cleavage
CAB88_RS05120	COG0095	Lipoate-protein ligase
CAB88_RS05130	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_RS05140	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CAB88_RS05150	COG4208	sulfate ABC transporter
CAB88_RS05170	COG1408	metallophosphoesterase
CAB88_RS05175	COG1078	dGTPase activity
CAB88_RS05185	COG1595	DNA-templated transcription, initiation
CAB88_RS05190	COG2207	Transcriptional regulator
CAB88_RS05190	COG3708	Transcriptional regulator
CAB88_RS05195	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_RS05210	COG2205	protein histidine kinase activity
CAB88_RS05215	COG0745	RESPONSE REGULATOR receiver
CAB88_RS05235	COG0501	Belongs to the peptidase M48B family
CAB88_RS05240	COG0840	transmembrane signaling receptor activity
CAB88_RS05250	COG3693	PFAM glycoside hydrolase, family 10
CAB88_RS05260	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CAB88_RS05265	COG2224	Isocitrate lyase
CAB88_RS05280	COG1278	Cold shock
CAB88_RS05300	COG0398	Pfam SNARE associated Golgi protein
CAB88_RS05320	COG0202	RNA polymerase activity
CAB88_RS05360	COG0179	Fumarylacetoacetate (FAA) hydrolase
CAB88_RS05385	COG0367	asparagine synthase
CAB88_RS05395	COG0753	catalase activity
CAB88_RS05400	COG0004	ammonium transporteR
CAB88_RS05430	COG2996	Protein conserved in bacteria
CAB88_RS05445	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_RS05460	COG0561	phosphatase activity
CAB88_RS05485	COG2267	carboxylic ester hydrolase activity
CAB88_RS05500	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CAB88_RS05505	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CAB88_RS05510	COG5504	Zn-dependent protease
CAB88_RS05520	COG0180	Tryptophanyl-tRNA synthetase
CAB88_RS05535	COG4166	transmembrane transport
CAB88_RS05540	COG0601	transmembrane transport
CAB88_RS05545	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CAB88_RS05550	COG0444	Belongs to the ABC transporter superfamily
CAB88_RS05555	COG4608	Belongs to the ABC transporter superfamily
CAB88_RS05560	COG0534	Mate efflux family protein
CAB88_RS05565	COG4166	transmembrane transport
CAB88_RS05590	COG0861	Integral membrane protein TerC family
CAB88_RS05600	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CAB88_RS05620	COG1164	Oligoendopeptidase f
CAB88_RS05635	COG2346	COG2346, Truncated hemoglobins
CAB88_RS05640	COG4116	CYTH
CAB88_RS05650	COG2357	RelA SpoT domain protein
CAB88_RS05660	COG0564	pseudouridine synthase activity
CAB88_RS05675	COG0772	Belongs to the SEDS family
CAB88_RS05680	COG1216	Glycosyl transferase, family 2
CAB88_RS05700	COG0463	Glycosyl transferase, family 2
CAB88_RS05700	COG0457	Tetratricopeptide repeat
CAB88_RS05720	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CAB88_RS05735	COG1091	dTDP-4-dehydrorhamnose reductase activity
CAB88_RS05780	COG2153	protein acetylation
CAB88_RS05790	COG2382	esterase
CAB88_RS05810	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CAB88_RS05825	COG0512	Glutamine amidotransferase of anthranilate synthase
CAB88_RS05825	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CAB88_RS05860	COG1620	l-lactate permease
CAB88_RS05865	COG5634	Uncharacterized conserved protein (DUF2278)
CAB88_RS05880	COG4640	response to antibiotic
CAB88_RS05910	COG2226	methyltransferase
CAB88_RS05930	COG0508	dehydrogenase complex catalyzes the overall conversion of
CAB88_RS05940	COG1476	TRANSCRIPTIONal
CAB88_RS06015	COG1686	Belongs to the peptidase S11 family
CAB88_RS06020	COG0681	Belongs to the peptidase S26 family
CAB88_RS06055	COG1012	belongs to the aldehyde dehydrogenase family
CAB88_RS06065	COG1176	ABC-type spermidine putrescine transport system, permease component I
CAB88_RS06070	COG1177	transmembrane transport
CAB88_RS06085	COG2409	Drug exporters of the RND superfamily
CAB88_RS06095	COG0564	pseudouridine synthase activity
CAB88_RS06105	COG2340	Cysteine-rich secretory protein family
CAB88_RS06110	COG0247	lactate metabolic process
CAB88_RS06115	COG0277	FAD linked oxidase domain protein
CAB88_RS06120	COG3835	regulator
CAB88_RS06130	COG0745	RESPONSE REGULATOR receiver
CAB88_RS06135	COG5002	protein histidine kinase activity
CAB88_RS06140	COG2186	Transcriptional regulator
CAB88_RS06160	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CAB88_RS06170	COG2116	formate transmembrane transporter activity
CAB88_RS06175	COG0861	Integral membrane protein TerC family
CAB88_RS06180	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CAB88_RS06190	COG2030	dehydratase
CAB88_RS06210	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS06215	COG3243	poly(R)-hydroxyalkanoic acid synthase
CAB88_RS06225	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CAB88_RS06245	COG1840	ABC-type Fe3 transport system, periplasmic component
CAB88_RS06250	COG3842	ATPase activity
CAB88_RS06275	COG1349	DNA-binding transcription factor activity
CAB88_RS06290	COG0235	Class ii aldolase
CAB88_RS06300	COG2861	carbohydrate metabolic process
CAB88_RS06310	COG3852	Histidine kinase
CAB88_RS06315	COG1846	Transcriptional regulator
CAB88_RS06325	COG2318	DinB family
CAB88_RS06335	COG5002	protein histidine kinase activity
CAB88_RS06345	COG0720	synthase
CAB88_RS06360	COG4873	Protein conserved in bacteria
CAB88_RS06400	COG1780	Probably involved in ribonucleotide reductase function
CAB88_RS06405	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CAB88_RS06410	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CAB88_RS06415	COG1725	Transcriptional regulator
CAB88_RS06420	COG1131	(ABC) transporter
CAB88_RS06430	COG1131	(ABC) transporter
CAB88_RS06450	COG1522	sequence-specific DNA binding
CAB88_RS06460	COG1335	isochorismatase
CAB88_RS06470	COG1619	proteins homologs of microcin C7 resistance protein MccF
CAB88_RS06475	COG2070	2-Nitropropane dioxygenase
CAB88_RS06480	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CAB88_RS06490	COG1696	Membrane protein involved in D-alanine export
CAB88_RS06515	COG0716	FMN binding
CAB88_RS06575	COG1846	Transcriptional regulator
CAB88_RS06590	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CAB88_RS06595	COG4709	membrane
CAB88_RS06600	COG3874	Sporulation protein YtfJ
CAB88_RS06630	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CAB88_RS06635	COG0028	Belongs to the TPP enzyme family
CAB88_RS06640	COG0440	acetolactate synthase activity
CAB88_RS06715	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CAB88_RS06730	COG1183	phosphatidylcholine synthase activity
CAB88_RS06735	COG1368	sulfuric ester hydrolase activity
CAB88_RS06745	COG0019	diaminopimelate decarboxylase activity
CAB88_RS06765	COG0529	Catalyzes the synthesis of activated sulfate
CAB88_RS06770	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CAB88_RS06790	COG1648	precorrin-2 dehydrogenase activity
CAB88_RS06800	COG0733	neurotransmitter:sodium symporter activity
CAB88_RS06820	COG1757	Na H antiporter
CAB88_RS06835	COG4758	membrane
CAB88_RS06840	COG4585	Histidine kinase
CAB88_RS06845	COG2197	response regulator
CAB88_RS06855	COG1114	Component of the transport system for branched-chain amino acids
CAB88_RS06865	COG2226	methyltransferase
CAB88_RS06910	COG0730	response to heat
CAB88_RS06915	COG0306	phosphate transporter
CAB88_RS06920	COG1392	Phosphate transport regulator
CAB88_RS06925	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CAB88_RS06940	COG3852	Histidine kinase
CAB88_RS06945	COG1801	Protein of unknown function DUF72
CAB88_RS06955	COG0582	viral genome integration into host DNA
CAB88_RS06960	COG5002	protein histidine kinase activity
CAB88_RS06980	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CAB88_RS06980	COG0392	lysyltransferase activity
CAB88_RS06995	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CAB88_RS07000	COG1686	Belongs to the peptidase S11 family
CAB88_RS07005	COG2715	membrane protein required for spore maturation
CAB88_RS07010	COG0700	Nucleoside recognition
CAB88_RS07015	COG1187	pseudouridine synthase activity
CAB88_RS07025	COG1333	cytochrome c biogenesis protein
CAB88_RS07030	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CAB88_RS07035	COG0745	RESPONSE REGULATOR receiver
CAB88_RS07040	COG5002	protein histidine kinase activity
CAB88_RS07045	COG2096	Adenosyltransferase
CAB88_RS07060	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CAB88_RS07065	COG1141	Ferredoxin
CAB88_RS07075	COG0514	ATP-dependent DNA helicase (RecQ)
CAB88_RS07080	COG1266	CAAX protease self-immunity
CAB88_RS07090	COG1408	metallophosphoesterase
CAB88_RS07095	COG0789	Transcriptional regulator
CAB88_RS07105	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CAB88_RS07125	COG0492	ferredoxin-NADP+ reductase activity
CAB88_RS07130	COG0252	asparaginase activity
CAB88_RS07200	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CAB88_RS07215	COG0142	geranyltranstransferase activity
CAB88_RS07225	COG0142	geranyltranstransferase activity
CAB88_RS07250	COG0457	Tetratricopeptide repeat
CAB88_RS07270	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CAB88_RS07275	COG2010	Cytochrome c
CAB88_RS07275	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CAB88_RS07280	COG4347	Protein of unknown function (DUF1405)
CAB88_RS07295	COG2738	Putative neutral zinc metallopeptidase
CAB88_RS07305	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_RS07310	COG1694	Mazg nucleotide pyrophosphohydrolase
CAB88_RS07330	COG0438	transferase activity, transferring glycosyl groups
CAB88_RS07370	COG1199	ATP-dependent helicase activity
CAB88_RS07370	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CAB88_RS07390	COG3935	DnaD domain protein
CAB88_RS07395	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CAB88_RS07405	COG4499	WXG100 protein secretion system (Wss), protein YukC
CAB88_RS07405	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CAB88_RS07465	COG0116	Belongs to the methyltransferase superfamily
CAB88_RS07475	COG1199	ATP-dependent helicase activity
CAB88_RS07480	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CAB88_RS07490	COG0024	Methionine aminopeptidase
CAB88_RS07500	COG2233	PERMEase
CAB88_RS07505	COG2311	Membrane
CAB88_RS07515	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CAB88_RS07525	COG0456	acetyltransferase
CAB88_RS07575	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CAB88_RS07590	COG3944	biosynthesis protein
CAB88_RS07600	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CAB88_RS07615	COG1215	transferase activity, transferring glycosyl groups
CAB88_RS07620	COG0438	transferase activity, transferring glycosyl groups
CAB88_RS07635	COG0454	-acetyltransferase
CAB88_RS07655	COG0328	RNA-DNA hybrid ribonuclease activity
CAB88_RS07690	COG3403	YqcI/YcgG family
CAB88_RS07695	COG1280	lysine exporter protein (LysE YggA)
CAB88_RS07715	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CAB88_RS07720	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CAB88_RS07730	COG0475	glutathione-regulated potassium exporter activity
CAB88_RS07735	COG4978	Transcriptional regulator
CAB88_RS07735	COG0789	Transcriptional regulator
CAB88_RS07745	COG2323	membrane
CAB88_RS07750	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CAB88_RS07810	COG1923	regulation of RNA biosynthetic process
CAB88_RS07820	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CAB88_RS07825	COG1360	Flagellar Motor Protein
CAB88_RS07830	COG2201	protein-glutamate methylesterase activity
CAB88_RS07835	COG2198	Histidine kinase
CAB88_RS07835	COG0643	Histidine kinase
CAB88_RS07840	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CAB88_RS07840	COG1776	CheC inhibitor of MCP methylation
CAB88_RS07855	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CAB88_RS07875	COG1256	bacterial-type flagellum assembly
CAB88_RS07880	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CAB88_RS07900	COG1815	bacterial-type flagellum-dependent cell motility
CAB88_RS07905	COG1558	bacterial-type flagellum-dependent cell motility
CAB88_RS07915	COG1766	The M ring may be actively involved in energy transduction
CAB88_RS07920	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CAB88_RS07930	COG1157	protein secretion by the type III secretion system
CAB88_RS07950	COG1749	Flagellar hook protein flgE
CAB88_RS07965	COG0835	chemotaxis
CAB88_RS07965	COG0784	Response regulator, receiver
CAB88_RS07975	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CAB88_RS07980	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CAB88_RS07985	COG0741	lytic transglycosylase activity
CAB88_RS07995	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CAB88_RS08000	COG1776	CheC inhibitor of MCP methylation
CAB88_RS08000	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CAB88_RS08010	COG1338	Plays a role in the flagellum-specific transport system
CAB88_RS08015	COG1987	bacterial-type flagellum assembly
CAB88_RS08025	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CAB88_RS08030	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CAB88_RS08035	COG1419	protein localization to endoplasmic reticulum
CAB88_RS08040	COG4786	Flagellar basal body rod
CAB88_RS08045	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CAB88_RS08050	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CAB88_RS08085	COG2329	Antibiotic biosynthesis monooxygenase
CAB88_RS08115	COG0583	DNA-binding transcription factor activity
CAB88_RS08120	COG3842	ATPase activity
CAB88_RS08130	COG1177	transmembrane transport
CAB88_RS08175	COG0406	alpha-ribazole phosphatase activity
CAB88_RS08205	COG0367	asparagine synthase
CAB88_RS08235	COG1802	Transcriptional regulator
CAB88_RS08240	COG0697	spore germination
CAB88_RS08250	COG0523	cobalamin synthesis protein
CAB88_RS08260	COG0701	Predicted permease
CAB88_RS08275	COG1757	Na H antiporter
CAB88_RS08280	COG0789	Transcriptional regulator
CAB88_RS08305	COG0534	Mate efflux family protein
CAB88_RS08310	COG3340	Belongs to the peptidase S51 family
CAB88_RS08330	COG0785	Cytochrome C biogenesis protein
CAB88_RS08335	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CAB88_RS08345	COG0457	Tetratricopeptide repeat
CAB88_RS08365	COG2733	membrane
CAB88_RS08405	COG1131	(ABC) transporter
CAB88_RS08420	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CAB88_RS08425	COG0528	UMP kinase activity
CAB88_RS08435	COG1027	Aspartate ammonia-lyase
CAB88_RS08440	COG0281	malic enzyme
CAB88_RS08445	COG4191	Histidine kinase
CAB88_RS08450	COG0784	Response regulator, receiver
CAB88_RS08455	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CAB88_RS08525	COG1695	Transcriptional regulator
CAB88_RS08535	COG0477	Major facilitator Superfamily
CAB88_RS08550	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CAB88_RS08555	COG2223	nitrite transmembrane transporter activity
CAB88_RS08560	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CAB88_RS08580	COG0733	neurotransmitter:sodium symporter activity
CAB88_RS08590	COG5566	PFAM Mor transcription activator
CAB88_RS08595	COG2323	membrane
CAB88_RS08625	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CAB88_RS08635	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CAB88_RS08640	COG0028	Belongs to the TPP enzyme family
CAB88_RS08660	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CAB88_RS08685	COG2814	Major facilitator Superfamily
CAB88_RS08690	COG3384	dioxygenase
CAB88_RS08700	COG3279	Response regulator of the LytR AlgR family
CAB88_RS08705	COG0427	acetyl-CoA hydrolase
CAB88_RS08725	COG2814	Major facilitator Superfamily
CAB88_RS08730	COG1309	transcriptional regulator
CAB88_RS08735	COG4166	transmembrane transport
CAB88_RS08740	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_RS08765	COG1914	H( )-stimulated, divalent metal cation uptake system
CAB88_RS08780	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CAB88_RS08785	COG0531	amino acid
CAB88_RS08815	COG2309	aminopeptidase activity
CAB88_RS08830	COG0456	acetyltransferase
CAB88_RS08845	COG1266	CAAX protease self-immunity
CAB88_RS08850	COG1309	transcriptional regulator
CAB88_RS08855	COG2390	Transcriptional regulator
CAB88_RS08865	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CAB88_RS08870	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
CAB88_RS08880	COG4846	Membrane protein involved in cytochrome C biogenesis
CAB88_RS08900	COG0583	DNA-binding transcription factor activity
CAB88_RS08915	COG0006	proline dipeptidase activity
CAB88_RS08925	COG2132	Multicopper oxidase
CAB88_RS08940	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CAB88_RS08960	COG1114	Component of the transport system for branched-chain amino acids
CAB88_RS08970	COG1276	copper resistance
CAB88_RS08970	COG2372	response to copper ion
CAB88_RS08975	COG4549	nuclear export factor GLE1
CAB88_RS08980	COG0697	spore germination
CAB88_RS08985	COG0583	DNA-binding transcription factor activity
CAB88_RS08990	COG1959	2 iron, 2 sulfur cluster binding
CAB88_RS08995	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CAB88_RS09000	COG0778	Nitroreductase
CAB88_RS09010	COG0154	amidase activity
CAB88_RS09015	COG1396	sequence-specific DNA binding
CAB88_RS09045	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_RS09120	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CAB88_RS09120	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CAB88_RS09210	COG2002	toxin-antitoxin pair type II binding
CAB88_RS09245	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CAB88_RS09355	COG4824	toxin secretion phage lysis holin
CAB88_RS09445	COG0628	permease
CAB88_RS09455	COG1231	oxidoreductase activity
CAB88_RS09465	COG0523	cobalamin synthesis protein
CAB88_RS09475	COG0411	ABC transporter
CAB88_RS09495	COG0583	DNA-binding transcription factor activity
CAB88_RS09505	COG1942	4-Oxalocrotonate Tautomerase
CAB88_RS09525	COG1271	oxidase subunit
CAB88_RS09530	COG1294	oxidase, subunit
CAB88_RS09535	COG4988	ABC transporter
CAB88_RS09540	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CAB88_RS09550	COG1216	Glycosyl transferase, family 2
CAB88_RS09590	COG1686	Belongs to the peptidase S11 family
CAB88_RS09605	COG1388	LysM domain
CAB88_RS09605	COG0791	NLP P60 protein
CAB88_RS09615	COG1132	(ABC) transporter
CAB88_RS09620	COG0745	RESPONSE REGULATOR receiver
CAB88_RS09625	COG5002	protein histidine kinase activity
CAB88_RS09635	COG0300	oxidoreductase activity
CAB88_RS09640	COG4122	O-methyltransferase activity
CAB88_RS09670	COG0460	homoserine dehydrogenase
CAB88_RS09695	COG1316	TRANSCRIPTIONal
CAB88_RS09705	COG0745	RESPONSE REGULATOR receiver
CAB88_RS09710	COG5002	protein histidine kinase activity
CAB88_RS09725	COG1285	pathogenesis
CAB88_RS09730	COG1247	-acetyltransferase
CAB88_RS09750	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CAB88_RS09760	COG1082	Xylose isomerase domain protein TIM barrel
CAB88_RS09770	COG2814	Major facilitator Superfamily
CAB88_RS09775	COG1279	arginine transmembrane transporter activity
CAB88_RS09780	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_RS09790	COG1752	Esterase of the alpha-beta hydrolase superfamily
CAB88_RS09825	COG0577	efflux transmembrane transporter activity
CAB88_RS09830	COG2002	toxin-antitoxin pair type II binding
CAB88_RS09835	COG1404	Belongs to the peptidase S8 family
CAB88_RS09840	COG0640	Transcriptional regulator
CAB88_RS09845	COG0667	Aldo Keto reductase
CAB88_RS09850	COG2814	Major facilitator Superfamily
CAB88_RS09875	COG0840	transmembrane signaling receptor activity
CAB88_RS09895	COG3949	Membrane
CAB88_RS09900	COG0783	Belongs to the Dps family
CAB88_RS09915	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CAB88_RS09925	COG1231	oxidoreductase activity
CAB88_RS09930	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_RS09935	COG4989	oxidoreductase activity
CAB88_RS09940	COG0523	cobalamin synthesis protein
CAB88_RS09945	COG0456	acetyltransferase
CAB88_RS09950	COG0803	Belongs to the bacterial solute-binding protein 9 family
CAB88_RS09960	COG0702	epimerase
CAB88_RS09980	COG4166	transmembrane transport
CAB88_RS10005	COG5337	Spore coat protein CotH
CAB88_RS10010	COG1051	belongs to the nudix hydrolase family
CAB88_RS10015	COG0586	Pfam SNARE associated Golgi protein
CAB88_RS10020	COG2244	polysaccharide biosynthetic process
CAB88_RS10030	COG0701	Predicted permease
CAB88_RS10035	COG3689	TIGRFAM TIGR03943 family protein
CAB88_RS10040	COG1607	acyl-coa hydrolase
CAB88_RS10050	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CAB88_RS10065	COG0702	epimerase
CAB88_RS10070	COG2839	Protein conserved in bacteria
CAB88_RS10075	COG1253	flavin adenine dinucleotide binding
CAB88_RS10100	COG1114	Component of the transport system for branched-chain amino acids
CAB88_RS10105	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CAB88_RS10125	COG0860	N-Acetylmuramoyl-L-alanine amidase
CAB88_RS10140	COG1876	peptidase activity
CAB88_RS10155	COG2211	Major facilitator Superfamily
CAB88_RS10180	COG0561	phosphatase activity
CAB88_RS10185	COG1846	Transcriptional regulator
CAB88_RS10190	COG2814	Major facilitator Superfamily
CAB88_RS10200	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CAB88_RS10205	COG4106	trans-aconitate 2-methyltransferase activity
CAB88_RS10220	COG1819	glycosyl
CAB88_RS10225	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_RS10230	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_RS10260	COG0456	acetyltransferase
CAB88_RS10310	COG3874	Sporulation protein YtfJ
CAB88_RS10335	COG2226	methyltransferase
CAB88_RS10355	COG1082	Xylose isomerase domain protein TIM barrel
CAB88_RS10360	COG0346	lactoylglutathione lyase activity
CAB88_RS10370	COG0604	alcohol dehydrogenase
CAB88_RS10375	COG1595	DNA-templated transcription, initiation
CAB88_RS10390	COG0426	domain, Protein
CAB88_RS10390	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CAB88_RS10400	COG0386	Belongs to the glutathione peroxidase family
CAB88_RS10405	COG1305	Transglutaminase-like
CAB88_RS10410	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
CAB88_RS10415	COG0714	Associated with various cellular activities
CAB88_RS10420	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CAB88_RS10425	COG1140	nitrate reductase beta subunit
CAB88_RS10430	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CAB88_RS10435	COG2181	nitrate reductase activity
CAB88_RS10440	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CAB88_RS10445	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CAB88_RS10450	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CAB88_RS10455	COG0303	'Molybdopterin
CAB88_RS10460	COG0314	molybdopterin synthase activity
CAB88_RS10470	COG2223	nitrite transmembrane transporter activity
CAB88_RS10490	COG1648	precorrin-2 dehydrogenase activity
CAB88_RS10500	COG1587	Uroporphyrinogen-III synthase
CAB88_RS10500	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CAB88_RS10505	COG2146	nitrite reductase [NAD(P)H] activity
CAB88_RS10510	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CAB88_RS10515	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
CAB88_RS10550	COG2359	stage V sporulation protein S
CAB88_RS10575	COG1418	mRNA catabolic process
CAB88_RS10580	COG0488	(ABC) transporter
CAB88_RS10595	COG0629	single-stranded DNA binding
CAB88_RS10610	COG1413	lyase activity
CAB88_RS10625	COG2521	methyltransferase
CAB88_RS10625	COG2136	Putative SAM-dependent methyltransferase
CAB88_RS10630	COG0018	arginyl-trna synthetase
CAB88_RS10670	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CAB88_RS10680	COG0017	Asparaginyl-tRNA synthetase
CAB88_RS10700	COG1674	ftsk spoiiie
CAB88_RS10775	COG0733	neurotransmitter:sodium symporter activity
CAB88_RS10800	COG2610	gluconate transmembrane transporter activity
CAB88_RS10810	COG1794	racemase activity, acting on amino acids and derivatives
CAB88_RS10820	COG0456	acetyltransferase
CAB88_RS10830	COG3655	Transcriptional regulator
CAB88_RS10835	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CAB88_RS10845	COG1131	(ABC) transporter
CAB88_RS10850	COG4473	ABC transporter
CAB88_RS10860	COG0546	phosphoglycolate phosphatase activity
CAB88_RS10875	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CAB88_RS10890	COG0768	penicillin binding
CAB88_RS10900	COG0204	Acyl-transferase
CAB88_RS10905	COG1272	protein, Hemolysin III
CAB88_RS10915	COG0805	protein transport
CAB88_RS10930	COG1307	EDD domain protein, DegV family
CAB88_RS10940	COG1999	signal sequence binding
CAB88_RS10945	COG0071	Belongs to the small heat shock protein (HSP20) family
CAB88_RS10950	COG0367	asparagine synthase
CAB88_RS10965	COG0860	N-Acetylmuramoyl-L-alanine amidase
CAB88_RS10970	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CAB88_RS10975	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CAB88_RS10995	COG1335	isochorismatase
CAB88_RS11000	COG1051	belongs to the nudix hydrolase family
CAB88_RS11005	COG0668	transmembrane transport
CAB88_RS11010	COG4585	Histidine kinase
CAB88_RS11010	COG2203	Gaf domain
CAB88_RS11015	COG2197	response regulator
CAB88_RS11020	COG1737	Transcriptional regulator
CAB88_RS11025	COG0384	phenazine biosynthesis protein PhzF
CAB88_RS11030	COG1064	alcohol dehydrogenase
CAB88_RS11060	COG1070	Carbohydrate kinase
CAB88_RS11070	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CAB88_RS11105	COG1125	glycine betaine transport
CAB88_RS11105	COG0517	IMP dehydrogenase activity
CAB88_RS11110	COG1174	glycine betaine transport
CAB88_RS11145	COG1253	flavin adenine dinucleotide binding
CAB88_RS11150	COG1012	belongs to the aldehyde dehydrogenase family
CAB88_RS11155	COG5506	Protein of unknown function (DUF1694)
CAB88_RS11175	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CAB88_RS11180	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CAB88_RS11185	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CAB88_RS11190	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CAB88_RS11195	COG0456	acetyltransferase
CAB88_RS11200	COG3829	transcription factor binding
CAB88_RS11205	COG1509	lysine 2,3-aminomutase activity
CAB88_RS11240	COG3064	Membrane
CAB88_RS11240	COG0515	serine threonine protein kinase
CAB88_RS11240	COG4991	sh3 domain protein
CAB88_RS11250	COG0671	phosphoesterase, PA-phosphatase related
CAB88_RS11255	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CAB88_RS11260	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CAB88_RS11340	COG0300	oxidoreductase activity
CAB88_RS11360	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CAB88_RS11360	COG4499	WXG100 protein secretion system (Wss), protein YukC
CAB88_RS11370	COG2814	Major facilitator Superfamily
CAB88_RS11375	COG4841	protein insertion into membrane
CAB88_RS11380	COG0372	Belongs to the citrate synthase family
CAB88_RS11385	COG2079	MmgE PrpD family protein
CAB88_RS11390	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CAB88_RS11395	COG1960	acyl-CoA dehydrogenase activity
CAB88_RS11400	COG2084	Dehydrogenase
CAB88_RS11410	COG1280	lysine exporter protein (LysE YggA)
CAB88_RS11415	COG1024	Enoyl-CoA hydratase
CAB88_RS11430	COG0420	3'-5' exonuclease activity
CAB88_RS11435	COG0419	ATPase involved in DNA repair
CAB88_RS11460	COG2223	nitrite transmembrane transporter activity
CAB88_RS11470	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS11475	COG1169	isochorismate synthase
CAB88_RS11480	COG1021	2,3-dihydroxybenzoate-AMP ligase
CAB88_RS11485	COG3433	isochorismatase activity
CAB88_RS11485	COG1535	isochorismatase
CAB88_RS11490	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CAB88_RS11495	COG3251	PFAM MbtH domain protein
CAB88_RS11500	COG2814	Major facilitator Superfamily
CAB88_RS11515	COG0776	regulation of translation
CAB88_RS11525	COG2318	DinB family
CAB88_RS11535	COG1115	amino acid carrier protein
CAB88_RS11555	COG1187	pseudouridine synthase activity
CAB88_RS11560	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CAB88_RS11565	COG1136	(ABC) transporter
CAB88_RS11575	COG2814	Major facilitator Superfamily
CAB88_RS11590	COG0028	Belongs to the TPP enzyme family
CAB88_RS11600	COG1234	tRNA 3'-trailer cleavage
CAB88_RS11625	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CAB88_RS11640	COG1846	Transcriptional regulator
CAB88_RS11650	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_RS11685	COG1247	-acetyltransferase
CAB88_RS11710	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CAB88_RS11725	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_RS11755	COG0583	DNA-binding transcription factor activity
CAB88_RS11760	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CAB88_RS11780	COG0583	DNA-binding transcription factor activity
CAB88_RS11785	COG2258	MOSC domain
CAB88_RS11800	COG1132	(ABC) transporter
CAB88_RS11805	COG1132	(ABC) transporter
CAB88_RS11865	COG0582	viral genome integration into host DNA
CAB88_RS11900	COG5484	DNA packaging
CAB88_RS11915	COG5632	N-Acetylmuramoyl-L-alanine amidase
CAB88_RS11945	COG1396	sequence-specific DNA binding
CAB88_RS11980	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CAB88_RS11985	COG1595	DNA-templated transcription, initiation
CAB88_RS12015	COG1649	PFAM Uncharacterised BCR, COG1649
CAB88_RS12040	COG2971	BadF BadG BcrA BcrD
CAB88_RS12060	COG1846	Transcriptional regulator
CAB88_RS12075	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_RS12130	COG0500	methyltransferase
CAB88_RS12130	COG3615	Tellurite resistance protein tehB
CAB88_RS12140	COG2226	methyltransferase
CAB88_RS12145	COG3961	Belongs to the TPP enzyme family
CAB88_RS12150	COG1846	Transcriptional regulator
CAB88_RS12200	COG2195	Cleaves the N-terminal amino acid of tripeptides
CAB88_RS12235	COG2002	toxin-antitoxin pair type II binding
CAB88_RS12245	COG0730	response to heat
CAB88_RS12250	COG0110	maltose O-acetyltransferase activity
CAB88_RS12255	COG1686	Belongs to the peptidase S11 family
CAB88_RS12270	COG2814	Major facilitator Superfamily
CAB88_RS12310	COG1115	amino acid carrier protein
CAB88_RS12315	COG2066	Belongs to the glutaminase family
CAB88_RS12320	COG4191	Histidine kinase
CAB88_RS12325	COG0784	Response regulator, receiver
CAB88_RS12335	COG0697	spore germination
CAB88_RS12340	COG0531	amino acid
CAB88_RS12350	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CAB88_RS12355	COG0531	amino acid
CAB88_RS12360	COG0322	excinuclease ABC activity
CAB88_RS12385	COG2207	Transcriptional regulator
CAB88_RS12410	COG5002	protein histidine kinase activity
CAB88_RS12420	COG2267	carboxylic ester hydrolase activity
CAB88_RS12485	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_RS12500	COG0768	penicillin binding
CAB88_RS12505	COG1595	DNA-templated transcription, initiation
CAB88_RS12515	COG0768	penicillin binding
CAB88_RS12520	COG0768	penicillin binding
CAB88_RS12535	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_RS12540	COG1408	metallophosphoesterase
CAB88_RS12550	COG1131	(ABC) transporter
CAB88_RS12560	COG1309	transcriptional regulator
CAB88_RS12575	COG1960	acyl-CoA dehydrogenase activity
CAB88_RS12580	COG0439	Biotin carboxylase
CAB88_RS12585	COG0511	ligase activity, forming carbon-carbon bonds
CAB88_RS12590	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CAB88_RS12595	COG1024	Enoyl-CoA hydratase
CAB88_RS12600	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CAB88_RS12605	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CAB88_RS12635	COG1686	Belongs to the peptidase S11 family
CAB88_RS12665	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CAB88_RS12680	COG3227	Zinc metalloprotease (Elastase)
CAB88_RS12685	COG2207	Transcriptional regulator
CAB88_RS12715	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CAB88_RS12725	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS12745	COG1733	regulation of RNA biosynthetic process
CAB88_RS12785	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_RS12795	COG2368	4-hydroxyphenylacetate
CAB88_RS12810	COG1063	alcohol dehydrogenase
CAB88_RS12820	COG2323	membrane
CAB88_RS12830	COG0693	protein deglycase activity
CAB88_RS12840	COG3386	PFAM SMP-30 Gluconolaconase
CAB88_RS12850	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
CAB88_RS12855	COG3773	Cell wall hydrolase
CAB88_RS12865	COG0745	RESPONSE REGULATOR receiver
CAB88_RS12870	COG2205	protein histidine kinase activity
CAB88_RS12890	COG0488	(ABC) transporter
CAB88_RS12910	COG1136	(ABC) transporter
CAB88_RS12915	COG0577	efflux transmembrane transporter activity
CAB88_RS12935	COG0460	homoserine dehydrogenase
CAB88_RS12940	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_RS12950	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CAB88_RS12975	COG0582	viral genome integration into host DNA
CAB88_RS13030	COG1484	DNA-dependent DNA replication
CAB88_RS13050	COG2002	toxin-antitoxin pair type II binding
CAB88_RS13065	COG2002	toxin-antitoxin pair type II binding
CAB88_RS13135	COG0582	viral genome integration into host DNA
CAB88_RS13170	COG5484	DNA packaging
CAB88_RS13185	COG0740	serine-type endopeptidase activity
CAB88_RS13245	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_RS13315	COG2124	cytochrome p450
CAB88_RS13355	COG0561	phosphatase activity
CAB88_RS13365	COG5002	protein histidine kinase activity
CAB88_RS13370	COG0768	penicillin binding
CAB88_RS13380	COG1819	glycosyl
CAB88_RS13385	COG1794	racemase activity, acting on amino acids and derivatives
CAB88_RS13410	COG2205	protein histidine kinase activity
CAB88_RS13480	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CAB88_RS13485	COG0604	alcohol dehydrogenase
CAB88_RS13490	COG0671	phosphoesterase, PA-phosphatase related
CAB88_RS13495	COG0768	penicillin binding
CAB88_RS13550	COG2814	Major facilitator Superfamily
CAB88_RS13570	COG0584	glycerophosphoryl diester phosphodiesterase
CAB88_RS13590	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_RS13595	COG0697	spore germination
CAB88_RS13630	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CAB88_RS13640	COG2223	nitrite transmembrane transporter activity
CAB88_RS13655	COG0592	DNA-directed DNA polymerase activity
CAB88_RS13705	COG3878	Protein conserved in bacteria
CAB88_RS13735	COG4667	esterase of the alpha-beta hydrolase superfamily
CAB88_RS13775	COG0322	excinuclease ABC activity
CAB88_RS13815	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CAB88_RS13840	COG1011	Hydrolase
CAB88_RS13845	COG0745	RESPONSE REGULATOR receiver
CAB88_RS13850	COG5002	protein histidine kinase activity
CAB88_RS13865	COG1522	sequence-specific DNA binding
CAB88_RS13885	COG1136	(ABC) transporter
CAB88_RS13890	COG0577	efflux transmembrane transporter activity
CAB88_RS13895	COG1073	alpha beta
CAB88_RS13900	COG0657	acetylesterase activity
CAB88_RS13905	COG0076	glutamate decarboxylase activity
CAB88_RS13920	COG1523	belongs to the glycosyl hydrolase 13 family
CAB88_RS13925	COG3227	Zinc metalloprotease (Elastase)
CAB88_RS13930	COG0737	Belongs to the 5'-nucleotidase family
CAB88_RS13945	COG0201	protein transport
CAB88_RS13960	COG0697	spore germination
CAB88_RS13965	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_RS13975	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CAB88_RS14005	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_RS14020	COG2959	enzyme of heme biosynthesis
CAB88_RS14060	COG1309	transcriptional regulator
CAB88_RS14095	COG3284	Transcriptional regulator
CAB88_RS14115	COG1349	DNA-binding transcription factor activity
CAB88_RS14130	COG1959	2 iron, 2 sulfur cluster binding
CAB88_RS14145	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CAB88_RS14150	COG0508	dehydrogenase complex catalyzes the overall conversion of
CAB88_RS14155	COG0022	dehydrogenase e1 component
CAB88_RS14160	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CAB88_RS14170	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS14175	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CAB88_RS14175	COG0456	acetyltransferase
CAB88_RS14215	COG4176	ABC-type proline glycine betaine transport system permease component
CAB88_RS14220	COG0517	IMP dehydrogenase activity
CAB88_RS14220	COG4175	Glycine betaine
CAB88_RS14250	COG2153	protein acetylation
CAB88_RS14255	COG3397	chitin binding
CAB88_RS14260	COG1819	glycosyl
CAB88_RS14275	COG2205	protein histidine kinase activity
CAB88_RS14285	COG2315	Protein conserved in bacteria
CAB88_RS14335	COG0456	acetyltransferase
CAB88_RS14340	COG3973	AAA domain
CAB88_RS14365	COG0514	ATP-dependent DNA helicase (RecQ)
CAB88_RS14400	COG4637	Psort location Cytoplasmic, score
CAB88_RS14420	COG3397	chitin binding
CAB88_RS14435	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CAB88_RS14440	COG1115	amino acid carrier protein
CAB88_RS14445	COG1012	belongs to the aldehyde dehydrogenase family
CAB88_RS14450	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CAB88_RS14460	COG3938	Belongs to the proline racemase family
CAB88_RS14465	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CAB88_RS14510	COG1078	dGTPase activity
CAB88_RS14515	COG0586	Pfam SNARE associated Golgi protein
CAB88_RS14525	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CAB88_RS14535	COG4166	transmembrane transport
CAB88_RS14545	COG4948	Mandelate Racemase Muconate Lactonizing
CAB88_RS14560	COG0667	Aldo Keto reductase
CAB88_RS14600	COG5002	protein histidine kinase activity
CAB88_RS14600	COG3850	Histidine kinase
CAB88_RS14605	COG0745	RESPONSE REGULATOR receiver
CAB88_RS14640	COG1164	Oligoendopeptidase f
CAB88_RS14645	COG1307	EDD domain protein, DegV family
CAB88_RS14670	COG2814	Major facilitator Superfamily
CAB88_RS14680	COG1664	Polymer-forming cytoskeletal
CAB88_RS14685	COG0789	Transcriptional regulator
CAB88_RS14690	COG4533	DNA binding
CAB88_RS14695	COG2814	Major facilitator Superfamily
CAB88_RS14695	COG0477	Major facilitator Superfamily
CAB88_RS14720	COG2261	transglycosylase associated protein
CAB88_RS14735	COG2226	methyltransferase
CAB88_RS14775	COG0436	Aminotransferase
CAB88_RS14780	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CAB88_RS14790	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
CAB88_RS14805	COG1131	(ABC) transporter
CAB88_RS14865	COG0628	permease
CAB88_RS14885	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CAB88_RS14890	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CAB88_RS14930	COG2746	aminoglycoside 3-N-acetyltransferase activity
CAB88_RS14940	COG0697	spore germination
CAB88_RS14950	COG2318	DinB family
CAB88_RS14970	COG4912	Dna alkylation repair
CAB88_RS14975	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CAB88_RS14980	COG0346	lactoylglutathione lyase activity
CAB88_RS14985	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_RS15005	COG0861	Integral membrane protein TerC family
CAB88_RS15010	COG1368	sulfuric ester hydrolase activity
CAB88_RS15015	COG0488	(ABC) transporter
CAB88_RS15020	COG2409	Drug exporters of the RND superfamily
CAB88_RS15020	COG1033	growth of symbiont in host cell
CAB88_RS15025	COG1309	transcriptional regulator
CAB88_RS15040	COG0287	Prephenate dehydrogenase
CAB88_RS15060	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
CAB88_RS15060	COG1605	Chorismate mutase
CAB88_RS15110	COG3584	3D domain protein
CAB88_RS15110	COG1388	LysM domain
CAB88_RS15125	COG0277	FAD linked oxidase domain protein
CAB88_RS15150	COG1879	ABC-type sugar transport system periplasmic component
CAB88_RS15155	COG1172	Belongs to the binding-protein-dependent transport system permease family
CAB88_RS15160	COG1172	Belongs to the binding-protein-dependent transport system permease family
CAB88_RS15170	COG2390	Transcriptional regulator
CAB88_RS15175	COG1070	Carbohydrate kinase
CAB88_RS15195	COG2329	Antibiotic biosynthesis monooxygenase
CAB88_RS15205	COG0640	Transcriptional regulator
CAB88_RS15210	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CAB88_RS15230	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CAB88_RS15235	COG4187	Peptidase family M20/M25/M40
CAB88_RS15240	COG1414	Transcriptional regulator
CAB88_RS15250	COG0833	amino acid
CAB88_RS15270	COG0825	malonyl-CoA metabolic process
CAB88_RS15280	COG3239	Fatty acid desaturase
CAB88_RS15290	COG2720	vancomycin resistance protein
CAB88_RS15295	COG1785	Belongs to the alkaline phosphatase family
CAB88_RS15305	COG3655	Transcriptional regulator
CAB88_RS15325	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_RS15330	COG0346	lactoylglutathione lyase activity
CAB88_RS15355	COG0714	Associated with various cellular activities
CAB88_RS15375	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CAB88_RS15380	COG0753	catalase activity
CAB88_RS15415	COG0778	Nitroreductase
CAB88_RS15420	COG1846	Transcriptional regulator
CAB88_RS15445	COG3831	ATPase activity
CAB88_RS15445	COG4884	unkown
CAB88_RS15480	COG0456	acetyltransferase
CAB88_RS15495	COG0697	spore germination
CAB88_RS15500	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_RS15545	COG0730	response to heat
CAB88_RS15555	COG0833	amino acid
CAB88_RS15565	COG4335	DNA alkylation repair
CAB88_RS15575	COG5002	protein histidine kinase activity
CAB88_RS15580	COG0745	RESPONSE REGULATOR receiver
CAB88_RS15590	COG1136	(ABC) transporter
CAB88_RS15590	COG0577	efflux transmembrane transporter activity
CAB88_RS15625	COG0768	penicillin binding
CAB88_RS15655	COG1984	allophanate hydrolase subunit 2
CAB88_RS15660	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CAB88_RS15665	COG1414	Transcriptional regulator
CAB88_RS15680	COG3142	Participates in the control of copper homeostasis
CAB88_RS15685	COG0640	Transcriptional regulator
CAB88_RS15695	COG1960	acyl-CoA dehydrogenase activity
CAB88_RS15710	COG3314	Sporulation integral membrane protein YlbJ
CAB88_RS15730	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
CAB88_RS15765	COG0737	Belongs to the 5'-nucleotidase family
CAB88_RS15770	COG2267	carboxylic ester hydrolase activity
CAB88_RS15775	COG1335	isochorismatase
CAB88_RS15795	COG0583	DNA-binding transcription factor activity
CAB88_RS15800	COG1846	Transcriptional regulator
CAB88_RS15805	COG0598	Magnesium transport protein CorA
CAB88_RS15850	COG0814	amino acid
CAB88_RS15875	COG0415	Belongs to the DNA photolyase family
CAB88_RS15880	COG0288	reversible hydration of carbon dioxide
CAB88_RS15890	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CAB88_RS15895	COG5609	conserved protein (DUF2294)
CAB88_RS15910	COG0456	acetyltransferase
CAB88_RS15915	COG1575	Belongs to the MenA family. Type 1 subfamily
CAB88_RS15925	COG0798	PFAM Bile acid sodium symporter
CAB88_RS15930	COG0346	lactoylglutathione lyase activity
CAB88_RS15935	COG0640	Transcriptional regulator
CAB88_RS15950	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CAB88_RS15960	COG1309	transcriptional regulator
CAB88_RS16010	COG2814	Major facilitator Superfamily
CAB88_RS16015	COG1309	transcriptional regulator
CAB88_RS16020	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS16025	COG1522	sequence-specific DNA binding
CAB88_RS16040	COG0346	lactoylglutathione lyase activity
CAB88_RS16110	COG0745	RESPONSE REGULATOR receiver
CAB88_RS16115	COG3850	Histidine kinase
CAB88_RS16115	COG5002	protein histidine kinase activity
CAB88_RS16195	COG2814	Major facilitator Superfamily
CAB88_RS16220	COG2515	1-aminocyclopropane-1-carboxylate deaminase
CAB88_RS16245	COG1690	Belongs to the RtcB family
CAB88_RS16255	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
CAB88_RS16270	COG0277	FAD linked oxidase domain protein
CAB88_RS16280	COG0577	efflux transmembrane transporter activity
CAB88_RS16300	COG5002	protein histidine kinase activity
CAB88_RS16300	COG3850	Histidine kinase
CAB88_RS16310	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_RS16325	COG1619	proteins homologs of microcin C7 resistance protein MccF
CAB88_RS16345	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CAB88_RS16365	COG0662	Cupin 2, conserved barrel domain protein
CAB88_RS16375	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CAB88_RS16375	COG2207	Transcriptional regulator
CAB88_RS16395	COG3409	Peptidoglycan-binding domain 1 protein
CAB88_RS16395	COG5632	N-Acetylmuramoyl-L-alanine amidase
CAB88_RS16415	COG1876	peptidase activity
CAB88_RS16420	COG2843	Capsule synthesis protein
CAB88_RS16430	COG0477	Major facilitator Superfamily
CAB88_RS16445	COG1846	Transcriptional regulator
CAB88_RS16450	COG2814	Major facilitator Superfamily
CAB88_RS16475	COG2031	fatty acid transporter
CAB88_RS16485	COG2249	NAD(P)H dehydrogenase (quinone) activity
CAB88_RS16540	COG1288	antiporter activity
CAB88_RS16545	COG2356	endonuclease I
CAB88_RS16555	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CAB88_RS16565	COG3620	sequence-specific DNA binding
CAB88_RS16580	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CAB88_RS16600	COG1733	regulation of RNA biosynthetic process
CAB88_RS16605	COG0778	Nitroreductase
CAB88_RS16640	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS16650	COG1131	(ABC) transporter
CAB88_RS16680	COG1011	Hydrolase
CAB88_RS16690	COG2365	Tyrosine phosphatase family
CAB88_RS16715	COG0346	lactoylglutathione lyase activity
CAB88_RS16720	COG1940	carbohydrate kinase activity
CAB88_RS16730	COG0110	maltose O-acetyltransferase activity
CAB88_RS16745	COG0628	permease
CAB88_RS16770	COG0500	methyltransferase
CAB88_RS16780	COG0477	Major facilitator Superfamily
CAB88_RS16805	COG1253	flavin adenine dinucleotide binding
CAB88_RS16810	COG0789	Transcriptional regulator
CAB88_RS16820	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CAB88_RS16845	COG0697	spore germination
CAB88_RS16855	COG1357	PFAM Pentapeptide repeats (8 copies)
CAB88_RS16860	COG3813	Protein conserved in bacteria
CAB88_RS16865	COG2706	6-phosphogluconolactonase activity
CAB88_RS16870	COG1070	Carbohydrate kinase
CAB88_RS16885	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CAB88_RS16890	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CAB88_RS16895	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CAB88_RS16900	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CAB88_RS16905	COG0604	alcohol dehydrogenase
CAB88_RS16910	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CAB88_RS16925	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS16940	COG0840	transmembrane signaling receptor activity
CAB88_RS16950	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CAB88_RS16950	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CAB88_RS16955	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CAB88_RS16955	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CAB88_RS16960	COG1733	regulation of RNA biosynthetic process
CAB88_RS16975	COG0656	L-ascorbic acid biosynthetic process
CAB88_RS16980	COG2814	Major facilitator Superfamily
CAB88_RS17015	COG2824	Alkylphosphonate utilization operon protein PhnA
CAB88_RS17020	COG0659	secondary active sulfate transmembrane transporter activity
CAB88_RS17035	COG0814	amino acid
CAB88_RS17075	COG1733	regulation of RNA biosynthetic process
CAB88_RS17080	COG2188	Transcriptional regulator
CAB88_RS17090	COG0673	inositol 2-dehydrogenase activity
CAB88_RS17095	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CAB88_RS17100	COG1733	regulation of RNA biosynthetic process
CAB88_RS17105	COG1733	regulation of RNA biosynthetic process
CAB88_RS17130	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_RS17155	COG0384	phenazine biosynthesis protein PhzF
CAB88_RS17165	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS17175	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_RS17180	COG2249	NAD(P)H dehydrogenase (quinone) activity
CAB88_RS17185	COG1733	regulation of RNA biosynthetic process
CAB88_RS17200	COG0726	polysaccharide deacetylase
CAB88_RS17210	COG1191	sigma factor activity
CAB88_RS17220	COG1280	lysine exporter protein (LysE YggA)
CAB88_RS17275	COG1151	hydroxylamine reductase activity
CAB88_RS17290	COG3409	Peptidoglycan-binding domain 1 protein
CAB88_RS17290	COG3757	hydrolase, family 25
CAB88_RS17325	COG2072	flavoprotein involved in K transport
CAB88_RS17365	COG1113	amino acid transport
CAB88_RS17370	COG2814	Major facilitator Superfamily
CAB88_RS17405	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CAB88_RS17410	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CAB88_RS17425	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CAB88_RS17430	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_RS17435	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_RS17440	COG3739	integral membrane protein
CAB88_RS17475	COG0583	DNA-binding transcription factor activity
CAB88_RS17495	COG1193	negative regulation of DNA recombination
CAB88_RS17510	COG2162	N-hydroxyarylamine O-acetyltransferase activity
CAB88_RS17535	COG3781	membrane
CAB88_RS17550	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CAB88_RS17575	COG0584	glycerophosphoryl diester phosphodiesterase
CAB88_RS17585	COG0640	Transcriptional regulator
CAB88_RS17590	COG0604	alcohol dehydrogenase
CAB88_RS17600	COG0457	Tetratricopeptide repeat
CAB88_RS17610	COG2808	Putative FMN-binding domain
CAB88_RS17615	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CAB88_RS17630	COG0277	FAD linked oxidase domain protein
CAB88_RS17660	COG0823	Involved in the tonB-independent uptake of proteins
CAB88_RS17665	COG3397	chitin binding
CAB88_RS17680	COG0697	spore germination
CAB88_RS17725	COG0488	(ABC) transporter
CAB88_RS17730	COG1309	transcriptional regulator
CAB88_RS17745	COG1876	peptidase activity
CAB88_RS17770	COG3852	Histidine kinase
CAB88_RS17780	COG1285	pathogenesis
CAB88_RS17795	COG2514	catechol 2,3-dioxygenase activity
CAB88_RS17800	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CAB88_RS17805	COG1126	abc transporter atp-binding protein
CAB88_RS17810	COG0765	amino acid transport
CAB88_RS17815	COG2720	vancomycin resistance protein
CAB88_RS17855	COG0716	FMN binding
CAB88_RS17865	COG1051	belongs to the nudix hydrolase family
CAB88_RS17885	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS17895	COG0165	Argininosuccinate lyase
CAB88_RS17910	COG4145	pantothenate transmembrane transporter activity
CAB88_RS17920	COG1012	belongs to the aldehyde dehydrogenase family
CAB88_RS17925	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS17935	COG1657	PFAM Prenyltransferase squalene oxidase
CAB88_RS17940	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
CAB88_RS17945	COG2962	Rard protein
CAB88_RS17950	COG3326	Membrane
CAB88_RS17965	COG0489	protein tyrosine kinase activity
CAB88_RS17975	COG0314	molybdopterin synthase activity
CAB88_RS17980	COG0303	'Molybdopterin
CAB88_RS17985	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CAB88_RS17990	COG2116	formate transmembrane transporter activity
CAB88_RS18005	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CAB88_RS18010	COG5609	conserved protein (DUF2294)
CAB88_RS18015	COG2427	Protein of unknown function (DUF1641)
CAB88_RS18020	COG3383	formate dehydrogenase (NAD+) activity
CAB88_RS18030	COG0697	spore germination
CAB88_RS18045	COG0531	amino acid
CAB88_RS18080	COG2226	methyltransferase
CAB88_RS18085	COG4166	transmembrane transport
CAB88_RS18095	COG4166	transmembrane transport
CAB88_RS18100	COG4166	transmembrane transport
CAB88_RS18105	COG1316	TRANSCRIPTIONal
CAB88_RS18115	COG1595	DNA-templated transcription, initiation
CAB88_RS18125	COG1131	(ABC) transporter
CAB88_RS18145	COG0673	inositol 2-dehydrogenase activity
CAB88_RS18150	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CAB88_RS18155	COG0187	DNA topoisomerase II activity
CAB88_RS18165	COG1832	CoA-binding protein
CAB88_RS18170	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CAB88_RS18175	COG0745	RESPONSE REGULATOR receiver
CAB88_RS18185	COG1328	CTP reductase activity
CAB88_RS18185	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CAB88_RS18195	COG4841	protein insertion into membrane
CAB88_RS18200	COG0824	Thioesterase
CAB88_RS18230	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CAB88_RS18240	COG2274	protein secretion by the type I secretion system
CAB88_RS18245	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CAB88_RS18275	COG2211	Major facilitator Superfamily
CAB88_RS18285	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CAB88_RS18300	COG0183	Belongs to the thiolase family
CAB88_RS18305	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_RS18310	COG1268	BioY protein
CAB88_RS18315	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_RS18320	COG1396	sequence-specific DNA binding
CAB88_RS18355	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_RS18370	COG5002	protein histidine kinase activity
CAB88_RS18375	COG0400	carboxylic ester hydrolase activity
CAB88_RS18380	COG0346	lactoylglutathione lyase activity
CAB88_RS18385	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CAB88_RS18390	COG0069	glutamate synthase activity
CAB88_RS18395	COG1902	pentaerythritol trinitrate reductase activity
CAB88_RS18400	COG1329	Transcriptional regulator
CAB88_RS18405	COG0010	Belongs to the arginase family
CAB88_RS18430	COG2226	methyltransferase
CAB88_RS18460	COG4846	Membrane protein involved in cytochrome C biogenesis
CAB88_RS18465	COG0785	Cytochrome C biogenesis protein
CAB88_RS18480	COG1473	amidohydrolase
CAB88_RS18490	COG1131	(ABC) transporter
CAB88_RS18505	COG0583	DNA-binding transcription factor activity
CAB88_RS18515	COG1346	cytolysis
CAB88_RS18530	COG0730	response to heat
CAB88_RS18555	COG1132	(ABC) transporter
CAB88_RS18560	COG1132	(ABC) transporter
CAB88_RS18595	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CAB88_RS18600	COG0737	Belongs to the 5'-nucleotidase family
CAB88_RS18610	COG0737	Belongs to the 5'-nucleotidase family
CAB88_RS18620	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CAB88_RS18640	COG1695	Transcriptional regulator
CAB88_RS18645	COG0174	glutamine synthetase
CAB88_RS18650	COG0789	Transcriptional regulator
CAB88_RS18655	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
CAB88_RS18660	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CAB88_RS18665	COG2860	membrane
CAB88_RS18670	COG0464	growth
CAB88_RS18705	COG1388	LysM domain
CAB88_RS18705	COG3584	3D domain protein
CAB88_RS18715	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CAB88_RS18715	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CAB88_RS18715	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CAB88_RS18720	COG1105	Belongs to the carbohydrate kinase PfkB family
CAB88_RS18725	COG1349	DNA-binding transcription factor activity
CAB88_RS18730	COG1979	alcohol dehydrogenase
CAB88_RS18735	COG2322	membrane
CAB88_RS18750	COG1113	amino acid transport
CAB88_RS18770	COG1408	metallophosphoesterase
CAB88_RS18775	COG2116	formate transmembrane transporter activity
CAB88_RS18790	COG2217	Heavy metal translocating P-type atpase
CAB88_RS18795	COG2608	mercury ion transmembrane transporter activity
CAB88_RS18800	COG1937	Protein conserved in bacteria
CAB88_RS18820	COG2819	hydrolase of the alpha beta superfamily
CAB88_RS18825	COG1120	ATPase activity
CAB88_RS18830	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_RS18835	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_RS18840	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CAB88_RS18845	COG0708	Exodeoxyribonuclease III
CAB88_RS18850	COG2169	Transcriptional regulator
CAB88_RS18855	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CAB88_RS18860	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CAB88_RS18870	COG2364	Membrane
CAB88_RS18885	COG2267	carboxylic ester hydrolase activity
CAB88_RS18890	COG3300	MHYT domain
CAB88_RS18890	COG5001	Diguanylate cyclase
CAB88_RS18910	COG1086	Polysaccharide biosynthesis protein
CAB88_RS18930	COG1346	cytolysis
CAB88_RS18940	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_RS18950	COG2188	Transcriptional regulator
CAB88_RS18955	COG2723	6-phospho-beta-galactosidase activity
CAB88_RS18965	COG1404	Belongs to the peptidase S8 family
CAB88_RS18970	COG3773	Cell wall hydrolase
CAB88_RS18985	COG1368	sulfuric ester hydrolase activity
CAB88_RS18990	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CAB88_RS19015	COG4550	Control of competence regulator ComK, YlbF/YmcA
CAB88_RS19025	COG1013	pyruvate-flavodoxin oxidoreductase activity
CAB88_RS19030	COG0674	pyruvate-flavodoxin oxidoreductase activity
CAB88_RS19030	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CAB88_RS19040	COG2359	stage V sporulation protein S
CAB88_RS19045	COG1692	metallophosphoesterase
CAB88_RS19070	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CAB88_RS19075	COG1426	Protein conserved in bacteria
CAB88_RS19090	COG0300	oxidoreductase activity
CAB88_RS19095	COG0612	Peptidase, M16
CAB88_RS19100	COG0612	Peptidase, M16
CAB88_RS19105	COG1079	Belongs to the binding-protein-dependent transport system permease family
CAB88_RS19110	COG4603	Belongs to the binding-protein-dependent transport system permease family
CAB88_RS19115	COG3845	ABC transporter
CAB88_RS19120	COG1744	ABC transporter substrate-binding protein PnrA-like
CAB88_RS19125	COG2188	Transcriptional regulator
CAB88_RS19145	COG0740	serine-type endopeptidase activity
CAB88_RS19150	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CAB88_RS19160	COG0527	aspartate kinase activity
CAB88_RS19165	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CAB88_RS19185	COG5444	nuclease activity
CAB88_RS19215	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_RS19335	COG0582	viral genome integration into host DNA
CAB88_RS19380	COG0305	Participates in initiation and elongation during chromosome replication
CAB88_RS19415	COG1396	sequence-specific DNA binding
CAB88_RS19440	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CAB88_RS19445	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CAB88_RS19450	COG1873	PFAM PRC-barrel domain
CAB88_RS19455	COG0612	Peptidase, M16
CAB88_RS19460	COG0726	polysaccharide deacetylase
CAB88_RS19475	COG0196	riboflavin kinase activity
CAB88_RS19485	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CAB88_RS19490	COG1550	Protein conserved in bacteria
CAB88_RS19500	COG1358	cellular component organization or biogenesis
CAB88_RS19505	COG2740	Nucleic-acid-binding protein implicated in transcription termination
CAB88_RS19510	COG0195	Participates in both transcription termination and antitermination
CAB88_RS19530	COG0750	zinc metalloprotease
CAB88_RS19540	COG4589	Belongs to the CDS family
CAB88_RS19585	COG4974	Belongs to the 'phage' integrase family
CAB88_RS19595	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CAB88_RS19600	COG0758	DNA mediated transformation
CAB88_RS19605	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CAB88_RS19645	COG1837	Belongs to the UPF0109 family
CAB88_RS19655	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CAB88_RS19665	COG0552	protein localization to endoplasmic reticulum
CAB88_RS19670	COG1196	nuclear chromosome segregation
CAB88_RS19680	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CAB88_RS19685	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS19690	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CAB88_RS19705	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CAB88_RS19710	COG1461	Dihydroxyacetone kinase
CAB88_RS19715	COG1302	Protein conserved in bacteria
CAB88_RS19730	COG1564	THIamine pyrophosphokinase
CAB88_RS19735	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CAB88_RS19745	COG0515	serine threonine protein kinase
CAB88_RS19745	COG2815	serine threonine protein kinase
CAB88_RS19750	COG0631	protein serine/threonine phosphatase activity
CAB88_RS19760	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CAB88_RS19760	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CAB88_RS19775	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CAB88_RS19780	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CAB88_RS19800	COG1561	YicC-like family, N-terminal region
CAB88_RS19805	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CAB88_RS19820	COG0006	proline dipeptidase activity
CAB88_RS19840	COG3069	C4-dicarboxylate transmembrane transporter activity
CAB88_RS19905	COG0564	pseudouridine synthase activity
CAB88_RS19925	COG3599	regulation of cell shape
CAB88_RS19930	COG2302	S4 RNA-binding domain
CAB88_RS19935	COG0762	integral membrane protein
CAB88_RS19945	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CAB88_RS19955	COG1873	PFAM PRC-barrel domain
CAB88_RS19960	COG1191	sigma factor activity
CAB88_RS19965	COG1191	sigma factor activity
CAB88_RS19975	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CAB88_RS19980	COG0849	cell division
CAB88_RS20000	COG0772	Belongs to the SEDS family
CAB88_RS20020	COG0768	penicillin binding
CAB88_RS20025	COG0768	penicillin binding
CAB88_RS20045	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CAB88_RS20060	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CAB88_RS20065	COG1399	metal-binding, possibly nucleic acid-binding protein
CAB88_RS20075	COG3480	Lon protease (S16) C-terminal proteolytic domain
CAB88_RS20080	COG1752	Esterase of the alpha-beta hydrolase superfamily
CAB88_RS20085	COG3314	Sporulation integral membrane protein YlbJ
CAB88_RS20095	COG0742	ribosomal rna small subunit methyltransferase
CAB88_RS20110	COG3679	Belongs to the UPF0342 family
CAB88_RS20115	COG0406	alpha-ribazole phosphatase activity
CAB88_RS20130	COG2340	Cysteine-rich secretory protein family
CAB88_RS20150	COG2801	Transposase and inactivated derivatives
CAB88_RS20160	COG3344	reverse transcriptase
CAB88_RS20170	COG3336	cytochrome c oxidase
CAB88_RS20205	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
CAB88_RS20215	COG0772	Belongs to the SEDS family
CAB88_RS20225	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CAB88_RS20230	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CAB88_RS20240	COG4896	Protein conserved in bacteria
CAB88_RS20255	COG1217	gtp-binding protein TYPA
CAB88_RS20265	COG0483	inositol monophosphate 1-phosphatase activity
CAB88_RS20285	COG1982	Orn Lys Arg decarboxylase major
CAB88_RS20335	COG0022	dehydrogenase e1 component
CAB88_RS20340	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CAB88_RS20355	COG0561	phosphatase activity
CAB88_RS20370	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CAB88_RS20375	COG0569	domain protein
CAB88_RS20395	COG0583	DNA-binding transcription factor activity
CAB88_RS20400	COG0517	IMP dehydrogenase activity
CAB88_RS20410	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
CAB88_RS20420	COG4703	Protein of unknown function (DUF1797)
CAB88_RS20435	COG2200	EAL domain
CAB88_RS20440	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS20445	COG1408	metallophosphoesterase
CAB88_RS20490	COG2814	Major facilitator Superfamily
CAB88_RS20510	COG3209	COG3209 Rhs family protein
CAB88_RS20525	COG2205	protein histidine kinase activity
CAB88_RS20535	COG0436	Aminotransferase
CAB88_RS20545	COG3833	ABC-type maltose transport systems, permease component
CAB88_RS20550	COG1175	transmembrane transport
CAB88_RS20555	COG2182	Extracellular solute-binding protein
CAB88_RS20565	COG0366	Alpha amylase catalytic
CAB88_RS20570	COG3842	ATPase activity
CAB88_RS20610	COG0183	Belongs to the thiolase family
CAB88_RS20645	COG1695	Transcriptional regulator
CAB88_RS20650	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS20670	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CAB88_RS20675	COG0436	Aminotransferase
CAB88_RS20710	COG2084	Dehydrogenase
CAB88_RS20720	COG2199	diguanylate cyclase activity
CAB88_RS20725	COG0778	Nitroreductase
CAB88_RS20750	COG2190	(PTS) system
CAB88_RS20750	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CAB88_RS20750	COG1263	PTS System
CAB88_RS20755	COG3711	transcriptional antiterminator
CAB88_RS20765	COG2188	Transcriptional regulator
CAB88_RS20775	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CAB88_RS20805	COG1547	Domain of unknown function (DUF309)
CAB88_RS20810	COG0456	acetyltransferase
CAB88_RS20815	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CAB88_RS20820	COG4086	secreted protein
CAB88_RS20825	COG0561	phosphatase activity
CAB88_RS20830	COG0697	spore germination
CAB88_RS20845	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CAB88_RS20870	COG0733	neurotransmitter:sodium symporter activity
CAB88_RS20890	COG1686	Belongs to the peptidase S11 family
CAB88_RS20900	COG1725	Transcriptional regulator
CAB88_RS20905	COG1131	(ABC) transporter
CAB88_RS20925	COG1846	Transcriptional regulator
CAB88_RS20940	COG0598	Magnesium transport protein CorA
CAB88_RS20965	COG4974	Belongs to the 'phage' integrase family
CAB88_RS20975	COG0735	belongs to the Fur family
CAB88_RS20980	COG1300	Membrane
CAB88_RS21000	COG0667	Aldo Keto reductase
CAB88_RS21005	COG0656	L-ascorbic acid biosynthetic process
CAB88_RS21010	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CAB88_RS21010	COG0456	acetyltransferase
CAB88_RS21020	COG0737	Belongs to the 5'-nucleotidase family
CAB88_RS21020	COG4085	toxin activity
CAB88_RS21020	COG1525	nuclease
CAB88_RS21030	COG0596	Alpha beta hydrolase
CAB88_RS21035	COG2056	Na+-H+ antiporter family
CAB88_RS21040	COG1609	Transcriptional regulator
CAB88_RS21045	COG0456	acetyltransferase
CAB88_RS21050	COG1073	alpha beta
CAB88_RS21065	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CAB88_RS21065	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CAB88_RS21070	COG0307	riboflavin synthase, alpha
CAB88_RS21100	COG1073	alpha beta
CAB88_RS21100	COG2226	methyltransferase
CAB88_RS21115	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CAB88_RS21130	COG1757	Na H antiporter
CAB88_RS21135	COG0737	Belongs to the 5'-nucleotidase family
CAB88_RS21145	COG1522	sequence-specific DNA binding
CAB88_RS21185	COG5444	nuclease activity
CAB88_RS21220	COG0300	oxidoreductase activity
CAB88_RS21225	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_RS21230	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CAB88_RS21235	COG1760	l-serine dehydratase
CAB88_RS21240	COG1760	l-serine dehydratase
CAB88_RS21270	COG1285	pathogenesis
CAB88_RS21285	COG2195	Cleaves the N-terminal amino acid of tripeptides
CAB88_RS21290	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_RS21305	COG1376	ErfK ybiS ycfS ynhG family protein
CAB88_RS21310	COG4129	membrane
CAB88_RS21315	COG1126	abc transporter atp-binding protein
CAB88_RS21320	COG0765	amino acid transport
CAB88_RS21325	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CAB88_RS21345	COG2323	membrane
CAB88_RS21350	COG0772	Belongs to the SEDS family
CAB88_RS21360	COG0508	dehydrogenase complex catalyzes the overall conversion of
CAB88_RS21365	COG0022	dehydrogenase e1 component
CAB88_RS21370	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CAB88_RS21375	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CAB88_RS21390	COG0280	phosphate acetyltransferase
CAB88_RS21400	COG3290	protein histidine kinase activity
CAB88_RS21400	COG3829	transcription factor binding
CAB88_RS21410	COG0584	glycerophosphoryl diester phosphodiesterase
CAB88_RS21415	COG3093	addiction module antidote protein HigA
CAB88_RS21435	COG0750	zinc metalloprotease
CAB88_RS21440	COG0497	DNA recombination
CAB88_RS21450	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
CAB88_RS21460	COG0142	geranyltranstransferase activity
CAB88_RS21485	COG1302	Protein conserved in bacteria
CAB88_RS21490	COG0439	Biotin carboxylase
CAB88_RS21495	COG0511	ligase activity, forming carbon-carbon bonds
CAB88_RS21540	COG3854	ATPases associated with a variety of cellular activities
CAB88_RS21565	COG0006	proline dipeptidase activity
CAB88_RS21580	COG3872	metal-dependent enzyme
CAB88_RS21590	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CAB88_RS21625	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CAB88_RS21635	COG1609	Transcriptional regulator
CAB88_RS21645	COG2076	Multidrug Resistance protein
CAB88_RS21650	COG2076	Multidrug Resistance protein
CAB88_RS21690	COG1725	Transcriptional regulator
CAB88_RS21725	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CAB88_RS21795	COG1459	type II secretion system
CAB88_RS21800	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CAB88_RS21865	COG1410	methionine synthase
CAB88_RS21865	COG0646	methionine synthase
CAB88_RS21870	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CAB88_RS21870	COG0646	methionine synthase
CAB88_RS21875	COG0626	cystathionine gamma-synthase activity
CAB88_RS21880	COG0626	cystathionine gamma-synthase activity
CAB88_RS21900	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_RS21910	COG1940	carbohydrate kinase activity
CAB88_RS21915	COG4483	Protein conserved in bacteria
CAB88_RS21920	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CAB88_RS21925	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CAB88_RS21930	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CAB88_RS21935	COG0704	Plays a role in the regulation of phosphate uptake
CAB88_RS21945	COG0573	inorganic phosphate transmembrane transporter activity
CAB88_RS21950	COG0573	inorganic phosphate transmembrane transporter activity
CAB88_RS21955	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CAB88_RS21960	COG0768	penicillin binding
CAB88_RS21965	COG0477	Major facilitator Superfamily
CAB88_RS21970	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CAB88_RS21980	COG5521	maltodextrose utilization protein MalA
CAB88_RS21995	COG0735	belongs to the Fur family
CAB88_RS22000	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CAB88_RS22005	COG1121	(ABC) transporter
CAB88_RS22010	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_RS22040	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CAB88_RS22045	COG2384	SAM-dependent methyltransferase
CAB88_RS22055	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CAB88_RS22060	COG0358	DNA primase activity
CAB88_RS22080	COG0517	IMP dehydrogenase activity
CAB88_RS22095	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CAB88_RS22100	COG0295	cytidine deaminase activity
CAB88_RS22105	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CAB88_RS22115	COG1480	7TM receptor with intracellular HD hydrolase
CAB88_RS22120	COG1702	phosphate starvation-inducible protein PhoH
CAB88_RS22140	COG1610	YqeY-like protein
CAB88_RS22145	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CAB88_RS22155	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CAB88_RS22160	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CAB88_RS22190	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CAB88_RS22195	COG1733	regulation of RNA biosynthetic process
CAB88_RS22220	COG1466	dna polymerase III delta subunit
CAB88_RS22230	COG2333	competence protein COMEC
CAB88_RS22230	COG0658	competence protein
CAB88_RS22235	COG2131	deaminase
CAB88_RS22240	COG1555	photosystem II stabilization
CAB88_RS22240	COG1596	polysaccharide export
CAB88_RS22245	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CAB88_RS22250	COG2226	methyltransferase
CAB88_RS22255	COG0799	negative regulation of ribosome biogenesis
CAB88_RS22260	COG1713	HD superfamily hydrolase involved in NAD metabolism
CAB88_RS22270	COG1534	Rna-binding protein
CAB88_RS22280	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CAB88_RS22285	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
CAB88_RS22310	COG1595	DNA-templated transcription, initiation
CAB88_RS22320	COG0778	Nitroreductase
CAB88_RS22325	COG2357	RelA SpoT domain protein
CAB88_RS22335	COG1785	Belongs to the alkaline phosphatase family
CAB88_RS22345	COG2267	carboxylic ester hydrolase activity
CAB88_RS22380	COG1404	Belongs to the peptidase S8 family
CAB88_RS22385	COG3186	Phenylalanine-4-hydroxylase
CAB88_RS22395	COG2514	catechol 2,3-dioxygenase activity
CAB88_RS22400	COG2259	Doxx family
CAB88_RS22445	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CAB88_RS22460	COG1454	alcohol dehydrogenase
CAB88_RS22460	COG1012	belongs to the aldehyde dehydrogenase family
CAB88_RS22465	COG0626	cystathionine gamma-synthase activity
CAB88_RS22470	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CAB88_RS22495	COG0768	penicillin binding
CAB88_RS22510	COG0826	peptidase U32
CAB88_RS22515	COG0826	peptidase U32
CAB88_RS22520	COG4122	O-methyltransferase activity
CAB88_RS22525	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CAB88_RS22540	COG4472	Bacterial protein of unknown function (DUF965)
CAB88_RS22555	COG0628	permease
CAB88_RS22575	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CAB88_RS22590	COG1104	cysteine desulfurase activity
CAB88_RS22595	COG1959	2 iron, 2 sulfur cluster binding
CAB88_RS22600	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CAB88_RS22620	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CAB88_RS22645	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CAB88_RS22655	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CAB88_RS22655	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
CAB88_RS22660	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CAB88_RS22665	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CAB88_RS22665	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CAB88_RS22675	COG2244	polysaccharide biosynthetic process
CAB88_RS22680	COG2323	membrane
CAB88_RS22690	COG1862	Preprotein translocase
CAB88_RS22720	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CAB88_RS22750	COG0157	Belongs to the NadC ModD family
CAB88_RS22755	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CAB88_RS22760	COG1104	cysteine desulfurase activity
CAB88_RS22765	COG1827	regulation of RNA biosynthetic process
CAB88_RS22770	COG2258	MOSC domain
CAB88_RS22775	COG0077	Prephenate dehydratase
CAB88_RS22780	COG0577	efflux transmembrane transporter activity
CAB88_RS22785	COG0577	efflux transmembrane transporter activity
CAB88_RS22790	COG1136	(ABC) transporter
CAB88_RS22795	COG5002	protein histidine kinase activity
CAB88_RS22800	COG0745	RESPONSE REGULATOR receiver
CAB88_RS22810	COG3290	protein histidine kinase activity
CAB88_RS22820	COG2868	ribosomal protein
CAB88_RS22830	COG1530	ribonuclease E activity
CAB88_RS22835	COG1994	Peptidase M50
CAB88_RS22840	COG0739	heme binding
CAB88_RS22845	COG2894	cell division
CAB88_RS22865	COG1077	Cell shape determining protein MreB Mrl
CAB88_RS22890	COG0285	dihydrofolate synthase activity
CAB88_RS22905	COG1388	LysM domain
CAB88_RS22915	COG0113	porphobilinogen synthase activity
CAB88_RS22920	COG1587	Uroporphyrinogen-III synthase
CAB88_RS22930	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CAB88_RS22940	COG1846	Transcriptional regulator
CAB88_RS22945	COG1764	response to oxidative stress
CAB88_RS22960	COG0470	DNA polymerase III
CAB88_RS22960	COG1067	ATP-dependent peptidase activity
CAB88_RS23060	COG3611	Membrane attachment protein
CAB88_RS23105	COG0622	Phosphoesterase
CAB88_RS23120	COG5401	PFAM Sporulation and spore germination
CAB88_RS23140	COG1309	transcriptional regulator
CAB88_RS23150	COG2197	response regulator
CAB88_RS23155	COG2233	PERMEase
CAB88_RS23160	COG0402	S-adenosylhomocysteine deaminase activity
CAB88_RS23165	COG1983	PspC domain protein
CAB88_RS23170	COG1396	sequence-specific DNA binding
CAB88_RS23175	COG0697	spore germination
CAB88_RS23185	COG1959	2 iron, 2 sulfur cluster binding
CAB88_RS23190	COG1668	transmembrane transport
CAB88_RS23195	COG4152	abc transporter atp-binding protein
CAB88_RS23200	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
CAB88_RS23205	COG1360	Flagellar Motor Protein
CAB88_RS23210	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CAB88_RS23220	COG1876	peptidase activity
CAB88_RS23225	COG0824	Thioesterase
CAB88_RS23230	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CAB88_RS23235	COG1053	succinate dehydrogenase
CAB88_RS23240	COG2009	succinate dehydrogenase
CAB88_RS23245	COG1719	4-vinyl reductase, 4VR
CAB88_RS23255	COG3118	belongs to the thioredoxin family
CAB88_RS23260	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CAB88_RS23265	COG2086	electron transfer activity
CAB88_RS23270	COG1024	Enoyl-CoA hydratase
CAB88_RS23275	COG1309	transcriptional regulator
CAB88_RS23280	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_RS23310	COG2318	DinB family
CAB88_RS23340	COG1131	(ABC) transporter
CAB88_RS23345	COG2205	protein histidine kinase activity
CAB88_RS23350	COG0745	RESPONSE REGULATOR receiver
CAB88_RS23360	COG4895	conserved protein (DUF2196)
CAB88_RS23365	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CAB88_RS23375	COG4509	Sortase family
CAB88_RS23380	COG1120	ATPase activity
CAB88_RS23395	COG5386	Cell surface protein
CAB88_RS23405	COG5386	Cell surface protein
CAB88_RS23410	COG1114	Component of the transport system for branched-chain amino acids
CAB88_RS23415	COG1187	pseudouridine synthase activity
CAB88_RS23430	COG1796	DNA polymerase
CAB88_RS23430	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CAB88_RS23435	COG1286	toxin biosynthetic process
CAB88_RS23475	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CAB88_RS23480	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CAB88_RS23490	COG1418	mRNA catabolic process
CAB88_RS23510	COG2814	Major facilitator Superfamily
CAB88_RS23515	COG1566	PFAM secretion protein HlyD family protein
CAB88_RS23520	COG1309	transcriptional regulator
CAB88_RS23525	COG1363	Peptidase, m42
CAB88_RS23550	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CAB88_RS23565	COG1484	DNA-dependent DNA replication
CAB88_RS23570	COG3611	Membrane attachment protein
CAB88_RS23580	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
CAB88_RS23590	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CAB88_RS23595	COG0237	dephospho-CoA kinase activity
CAB88_RS23600	COG1971	Probably functions as a manganese efflux pump
CAB88_RS23610	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CAB88_RS23610	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CAB88_RS23615	COG5002	protein histidine kinase activity
CAB88_RS23620	COG0745	RESPONSE REGULATOR receiver
CAB88_RS23645	COG0538	isocitrate dehydrogenase activity
CAB88_RS23650	COG0372	Belongs to the citrate synthase family
CAB88_RS23665	COG0628	permease
CAB88_RS23670	COG3030	protein affecting phage T7 exclusion by the F plasmid
CAB88_RS23695	COG1725	Transcriptional regulator
CAB88_RS23700	COG0281	malic enzyme
CAB88_RS23705	COG0587	DNA-directed DNA polymerase activity
CAB88_RS23720	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
CAB88_RS23735	COG4109	DRTGG domain
CAB88_RS23750	COG0006	proline dipeptidase activity
CAB88_RS23790	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_RS23795	COG0662	Cupin 2, conserved barrel domain protein
CAB88_RS23810	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS23815	COG0589	response to stress
CAB88_RS23860	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_RS23885	COG0827	DNA restriction-modification system
CAB88_RS23890	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CAB88_RS23895	COG3874	Sporulation protein YtfJ
CAB88_RS23910	COG1574	metal-dependent hydrolase with the TIM-barrel fold
CAB88_RS23920	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CAB88_RS23935	COG1104	cysteine desulfurase activity
CAB88_RS23945	COG0583	DNA-binding transcription factor activity
CAB88_RS23950	COG0697	spore germination
CAB88_RS23955	COG1309	transcriptional regulator
CAB88_RS23960	COG1956	GAF domain-containing protein
CAB88_RS23965	COG0626	cystathionine gamma-synthase activity
CAB88_RS24000	COG1595	DNA-templated transcription, initiation
CAB88_RS24010	COG0110	maltose O-acetyltransferase activity
CAB88_RS24015	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CAB88_RS24020	COG0454	-acetyltransferase
CAB88_RS24025	COG0517	IMP dehydrogenase activity
CAB88_RS24030	COG0123	including yeast histone deacetylase and acetoin utilization protein
CAB88_RS24035	COG2267	carboxylic ester hydrolase activity
CAB88_RS24045	COG0745	RESPONSE REGULATOR receiver
CAB88_RS24050	COG5002	protein histidine kinase activity
CAB88_RS24055	COG0666	response to abiotic stimulus
CAB88_RS24085	COG1609	Transcriptional regulator
CAB88_RS24100	COG4851	CamS sex pheromone cAM373 precursor
CAB88_RS24105	COG3118	belongs to the thioredoxin family
CAB88_RS24115	COG2309	aminopeptidase activity
CAB88_RS24135	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_RS24140	COG0697	spore germination
CAB88_RS24145	COG0789	Transcriptional regulator
CAB88_RS24160	COG1674	ftsk spoiiie
CAB88_RS24175	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CAB88_RS24185	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CAB88_RS24190	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
CAB88_RS24195	COG1363	Peptidase, m42
CAB88_RS24205	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_RS24220	COG0510	thiamine kinase activity
CAB88_RS24225	COG1523	belongs to the glycosyl hydrolase 13 family
CAB88_RS24235	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CAB88_RS24240	COG1349	DNA-binding transcription factor activity
CAB88_RS24245	COG1187	pseudouridine synthase activity
CAB88_RS24250	COG2244	polysaccharide biosynthetic process
CAB88_RS24255	COG2081	HI0933 family
CAB88_RS24265	COG2814	Major facilitator Superfamily
CAB88_RS24275	COG3832	glyoxalase III activity
CAB88_RS24300	COG1329	Transcriptional regulator
CAB88_RS24325	COG0314	molybdopterin synthase activity
CAB88_RS24330	COG1763	Mo-molybdopterin cofactor biosynthetic process
CAB88_RS24335	COG0303	'Molybdopterin
CAB88_RS24345	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CAB88_RS24350	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CAB88_RS24370	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CAB88_RS24380	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CAB88_RS24420	COG2814	Major facilitator Superfamily
CAB88_RS24425	COG0475	glutathione-regulated potassium exporter activity
CAB88_RS24430	COG0490	domain, Protein
CAB88_RS24435	COG0582	viral genome integration into host DNA
CAB88_RS24450	COG1136	(ABC) transporter
CAB88_RS24480	COG1242	4 iron, 4 sulfur cluster binding
CAB88_RS24485	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CAB88_RS24490	COG1131	(ABC) transporter
CAB88_RS24500	COG1794	racemase activity, acting on amino acids and derivatives
CAB88_RS24525	COG2267	carboxylic ester hydrolase activity
CAB88_RS24530	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CAB88_RS24535	COG0671	phosphoesterase, PA-phosphatase related
CAB88_RS24540	COG0438	transferase activity, transferring glycosyl groups
CAB88_RS24635	COG5002	protein histidine kinase activity
CAB88_RS24640	COG3852	Histidine kinase
CAB88_RS24645	COG0753	catalase activity
CAB88_RS24650	COG2267	carboxylic ester hydrolase activity
CAB88_RS24655	COG1368	sulfuric ester hydrolase activity
CAB88_RS24680	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CAB88_RS24685	COG1116	anion transmembrane transporter activity
CAB88_RS24690	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CAB88_RS24715	COG0494	nUDIX hydrolase
CAB88_RS24750	COG2076	Multidrug Resistance protein
CAB88_RS24755	COG2076	Multidrug Resistance protein
CAB88_RS24760	COG0789	Transcriptional regulator
CAB88_RS24765	COG1854	S-ribosylhomocysteine lyase activity
CAB88_RS24775	COG0288	reversible hydration of carbon dioxide
CAB88_RS24780	COG1271	oxidase subunit
CAB88_RS24785	COG1294	oxidase, subunit
CAB88_RS24800	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_RS24820	COG1842	Phage shock protein A
CAB88_RS24845	COG3859	Proton-coupled thiamine transporter YuaJ
CAB88_RS24850	COG5002	protein histidine kinase activity
CAB88_RS24855	COG0745	RESPONSE REGULATOR receiver
CAB88_RS24880	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
CAB88_RS24885	COG1597	lipid kinase activity
CAB88_RS24895	COG0577	efflux transmembrane transporter activity
CAB88_RS24900	COG1136	(ABC) transporter
CAB88_RS24915	COG0586	Pfam SNARE associated Golgi protein
CAB88_RS24925	COG0577	efflux transmembrane transporter activity
CAB88_RS24930	COG1136	(ABC) transporter
CAB88_RS24935	COG2207	Transcriptional regulator
CAB88_RS24935	COG3708	Transcriptional regulator
CAB88_RS24945	COG5658	integral membrane protein
CAB88_RS24950	COG0640	Transcriptional regulator
CAB88_RS24955	COG0745	RESPONSE REGULATOR receiver
CAB88_RS24960	COG2205	protein histidine kinase activity
CAB88_RS24965	COG0577	efflux transmembrane transporter activity
CAB88_RS24970	COG0577	efflux transmembrane transporter activity
CAB88_RS24975	COG1136	(ABC) transporter
CAB88_RS24980	COG0577	efflux transmembrane transporter activity
CAB88_RS25005	COG2188	Transcriptional regulator
CAB88_RS25025	COG3964	amidohydrolase
CAB88_RS25050	COG4948	Mandelate Racemase Muconate Lactonizing
CAB88_RS25060	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CAB88_RS25065	COG0596	Alpha beta hydrolase
CAB88_RS25075	COG1169	isochorismate synthase
CAB88_RS25080	COG1575	Belongs to the MenA family. Type 1 subfamily
CAB88_RS25085	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CAB88_RS25090	COG1278	Cold shock
CAB88_RS25120	COG0058	SHG alpha-glucan phosphorylase activity
CAB88_RS25130	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CAB88_RS25150	COG1404	Belongs to the peptidase S8 family
CAB88_RS25295	COG1285	pathogenesis
CAB88_RS25300	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CAB88_RS25320	COG2155	Conserved Protein
CAB88_RS25325	COG1098	S1 RNA binding domain
CAB88_RS25330	COG0436	Aminotransferase
CAB88_RS25335	COG1522	sequence-specific DNA binding
CAB88_RS25340	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CAB88_RS25345	COG2267	carboxylic ester hydrolase activity
CAB88_RS25355	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CAB88_RS25375	COG5018	Exonuclease
CAB88_RS25380	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CAB88_RS25405	COG2050	protein possibly involved in aromatic compounds catabolism
CAB88_RS25415	COG1268	BioY protein
CAB88_RS25420	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CAB88_RS25425	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CAB88_RS25445	COG2076	Multidrug Resistance protein
CAB88_RS25450	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CAB88_RS25460	COG3584	3D domain protein
CAB88_RS25475	COG1252	NADH dehydrogenase
CAB88_RS25490	COG3708	Transcriptional regulator
CAB88_RS25505	COG1683	Conserved Protein
CAB88_RS25555	COG5632	N-Acetylmuramoyl-L-alanine amidase
CAB88_RS25555	COG1388	LysM domain
CAB88_RS25555	COG3409	Peptidoglycan-binding domain 1 protein
CAB88_RS25560	COG4824	toxin secretion phage lysis holin
CAB88_RS25705	COG1191	sigma factor activity
CAB88_RS25730	COG3645	SOS response
CAB88_RS25730	COG3646	Phage regulatory protein
CAB88_RS25750	COG1396	sequence-specific DNA binding
CAB88_RS25785	COG4122	O-methyltransferase activity
CAB88_RS25795	COG0316	Belongs to the HesB IscA family
CAB88_RS25805	COG0316	Belongs to the HesB IscA family
CAB88_RS25820	COG1252	NADH dehydrogenase
CAB88_RS25830	COG2274	protein secretion by the type I secretion system
CAB88_RS25835	COG0390	transport system, permease component
CAB88_RS25840	COG2824	Alkylphosphonate utilization operon protein PhnA
CAB88_RS25865	COG4837	Protein of unknown function (DUF1462)
CAB88_RS25870	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CAB88_RS25885	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CAB88_RS25890	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CAB88_RS25910	COG1358	cellular component organization or biogenesis
CAB88_RS25920	COG2249	NAD(P)H dehydrogenase (quinone) activity
CAB88_RS25925	COG0647	UMP catabolic process
CAB88_RS25935	COG2445	Protein of unknown function DUF86
CAB88_RS25940	COG1494	fructose-1,6-bisphosphatase
CAB88_RS25965	COG4470	Protein conserved in bacteria
CAB88_RS25975	COG0789	Transcriptional regulator
CAB88_RS25980	COG4377	Putative membrane peptidase family (DUF2324)
CAB88_RS26005	COG0739	heme binding
CAB88_RS26015	COG3377	Domain of unknown function (DUF1805)
CAB88_RS26020	COG0737	Belongs to the 5'-nucleotidase family
CAB88_RS26025	COG0719	Fe-S assembly protein
CAB88_RS26030	COG0822	iron-sulfur transferase activity
CAB88_RS26035	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CAB88_RS26040	COG0719	Fe-S assembly protein
CAB88_RS26045	COG0396	ATPase activity
CAB88_RS26050	COG1464	Belongs to the NlpA lipoprotein family
CAB88_RS26055	COG1464	Belongs to the NlpA lipoprotein family
CAB88_RS26060	COG2011	ABC-type metal ion transport system permease component
CAB88_RS26075	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CAB88_RS26080	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CAB88_RS26090	COG1393	Belongs to the ArsC family
CAB88_RS26130	COG0039	L-malate dehydrogenase activity
CAB88_RS26150	COG1309	transcriptional regulator
CAB88_RS26155	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_RS26160	COG1960	acyl-CoA dehydrogenase activity
CAB88_RS26165	COG0183	Belongs to the thiolase family
CAB88_RS26170	COG1024	Enoyl-CoA hydratase
CAB88_RS26170	COG1250	3-hydroxyacyl-CoA dehydrogenase
CAB88_RS26180	COG1686	Belongs to the peptidase S11 family
CAB88_RS26195	COG0011	TIGRFAM Protein of
CAB88_RS26200	COG0840	transmembrane signaling receptor activity
CAB88_RS26215	COG2814	Major facilitator Superfamily
CAB88_RS26220	COG0531	amino acid
CAB88_RS26245	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_RS26285	COG0586	Pfam SNARE associated Golgi protein
CAB88_RS26295	COG1376	ErfK ybiS ycfS ynhG family protein
CAB88_RS26300	COG0745	RESPONSE REGULATOR receiver
CAB88_RS26305	COG5002	protein histidine kinase activity
CAB88_RS26335	COG0840	transmembrane signaling receptor activity
CAB88_RS26340	COG2151	metal-sulfur cluster biosynthetic enzyme
CAB88_RS26345	COG3227	Zinc metalloprotease (Elastase)
CAB88_RS26365	COG0586	Pfam SNARE associated Golgi protein
CAB88_RS26370	COG0475	glutathione-regulated potassium exporter activity
CAB88_RS26375	COG0490	domain, Protein
CAB88_RS26385	COG1115	amino acid carrier protein
CAB88_RS26390	COG0783	Belongs to the Dps family
CAB88_RS26405	COG2318	DinB family
CAB88_RS26415	COG1611	Belongs to the LOG family
CAB88_RS26425	COG1528	Iron-storage protein
CAB88_RS26435	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CAB88_RS26440	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CAB88_RS26445	COG1115	amino acid carrier protein
CAB88_RS26450	COG1115	amino acid carrier protein
CAB88_RS26455	COG2910	NAD(P)H-binding
CAB88_RS26475	COG0656	L-ascorbic acid biosynthetic process
CAB88_RS26480	COG2814	Major facilitator Superfamily
CAB88_RS26485	COG1733	regulation of RNA biosynthetic process
CAB88_RS26495	COG1252	NADH dehydrogenase
CAB88_RS26500	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CAB88_RS26555	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_RS26570	COG1335	isochorismatase
CAB88_RS26575	COG1522	sequence-specific DNA binding
CAB88_RS26640	COG0557	exoribonuclease II activity
CAB88_RS26645	COG1647	Serine aminopeptidase, S33
CAB88_RS26650	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CAB88_RS26655	COG1346	cytolysis
CAB88_RS26690	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CAB88_RS26705	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CAB88_RS26715	COG4585	Histidine kinase
CAB88_RS26745	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CAB88_RS26760	COG2323	membrane
CAB88_RS26770	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CAB88_RS26780	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CAB88_RS26790	COG1051	belongs to the nudix hydrolase family
CAB88_RS26800	COG0492	ferredoxin-NADP+ reductase activity
CAB88_RS26805	COG0457	Tetratricopeptide repeat
CAB88_RS26810	COG0110	maltose O-acetyltransferase activity
CAB88_RS26830	COG1950	PFAM Membrane protein of
CAB88_RS26840	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CAB88_RS26860	COG0789	Transcriptional regulator
CAB88_RS26880	COG0583	DNA-binding transcription factor activity
CAB88_RS26890	COG0655	NAD(P)H dehydrogenase (quinone) activity
CAB88_RS26895	COG0488	(ABC) transporter
CAB88_RS26905	COG1132	(ABC) transporter
CAB88_RS26915	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CAB88_RS26920	COG3409	Peptidoglycan-binding domain 1 protein
CAB88_RS26920	COG0793	Belongs to the peptidase S41A family
CAB88_RS26925	COG2177	Part of the ABC transporter FtsEX involved in
CAB88_RS26930	COG2884	Cell division ATP-binding protein ftsE
CAB88_RS26945	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CAB88_RS26960	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CAB88_RS26965	COG1278	Cold shock
CAB88_RS26970	COG1040	competence protein
CAB88_RS26975	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
CAB88_RS26980	COG0791	NLP P60 protein
CAB88_RS26980	COG1388	LysM domain
CAB88_RS26985	COG1733	regulation of RNA biosynthetic process
CAB88_RS26995	COG1307	EDD domain protein, DegV family
CAB88_RS27000	COG1739	Uncharacterized protein family UPF0029
CAB88_RS27005	COG1316	TRANSCRIPTIONal
CAB88_RS27010	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CAB88_RS27015	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CAB88_RS27020	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CAB88_RS27030	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CAB88_RS27030	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CAB88_RS27050	COG1486	melibiose metabolic process
CAB88_RS27055	COG1447	Phosphotransferase system cellobiose-specific component IIA
CAB88_RS27060	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CAB88_RS27080	COG1447	Phosphotransferase system cellobiose-specific component IIA
CAB88_RS27090	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CAB88_RS27095	COG1301	dicarboxylic acid transport
CAB88_RS27110	COG1511	domain protein
CAB88_RS27115	COG0583	DNA-binding transcription factor activity
CAB88_RS27120	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CAB88_RS27130	COG1271	oxidase subunit
CAB88_RS27135	COG1294	oxidase, subunit
CAB88_RS27140	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CAB88_RS27170	COG1620	l-lactate permease
CAB88_RS27180	COG2389	metal-binding protein
CAB88_RS27195	COG1368	sulfuric ester hydrolase activity
CAB88_RS27210	COG1388	LysM domain
CAB88_RS27210	COG0791	NLP P60 protein
CAB88_RS27215	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CAB88_RS27225	COG1215	transferase activity, transferring glycosyl groups
CAB88_RS27235	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CAB88_RS27245	COG3584	3D domain protein
CAB88_RS27245	COG1388	LysM domain
CAB88_RS27270	COG4715	Zinc finger, swim domain protein
CAB88_RS27275	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CAB88_RS27285	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_RS27325	COG0577	efflux transmembrane transporter activity
CAB88_RS27330	COG1136	(ABC) transporter
CAB88_RS27365	COG5002	protein histidine kinase activity
CAB88_RS27370	COG0745	RESPONSE REGULATOR receiver
CAB88_RS27375	COG1482	cell wall glycoprotein biosynthetic process
CAB88_RS27380	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CAB88_RS27380	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CAB88_RS27380	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CAB88_RS27385	COG3711	transcriptional antiterminator
CAB88_RS27385	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CAB88_RS27390	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CAB88_RS27405	COG1482	cell wall glycoprotein biosynthetic process
CAB88_RS27410	COG0662	Cupin 2, conserved barrel domain protein
CAB88_RS27410	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
CAB88_RS27425	COG0438	transferase activity, transferring glycosyl groups
CAB88_RS27435	COG0438	transferase activity, transferring glycosyl groups
CAB88_RS27435	COG0297	glycogen (starch) synthase activity
CAB88_RS27440	COG0110	maltose O-acetyltransferase activity
CAB88_RS27460	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CAB88_RS27465	COG4464	protein tyrosine phosphatase activity
CAB88_RS27470	COG0489	protein tyrosine kinase activity
CAB88_RS27475	COG3944	biosynthesis protein
CAB88_RS27480	COG0489	protein tyrosine kinase activity
CAB88_RS27495	COG1609	Transcriptional regulator
CAB88_RS27510	COG0739	heme binding
CAB88_RS27525	COG3279	Response regulator of the LytR AlgR family
CAB88_RS27530	COG2385	sporulation resulting in formation of a cellular spore
CAB88_RS27545	COG4836	Membrane
CAB88_RS27550	COG1007	ATP synthesis coupled electron transport
CAB88_RS27555	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CAB88_RS27560	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CAB88_RS27570	COG0839	Belongs to the complex I subunit 6 family
CAB88_RS27590	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CAB88_RS27605	COG3300	MHYT domain
CAB88_RS27605	COG5001	Diguanylate cyclase
CAB88_RS27655	COG0356	it plays a direct role in the translocation of protons across the membrane
CAB88_RS27695	COG0698	ribose 5-phosphate isomerase
CAB88_RS27710	COG2190	(PTS) system
CAB88_RS27715	COG2259	Doxx family
CAB88_RS27720	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CAB88_RS27740	COG0009	L-threonylcarbamoyladenylate synthase
CAB88_RS27780	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CAB88_RS27785	COG1494	fructose-1,6-bisphosphatase
CAB88_RS27810	COG4821	SIS domain
CAB88_RS27830	COG1960	acyl-CoA dehydrogenase activity
CAB88_RS27835	COG1960	acyl-CoA dehydrogenase activity
CAB88_RS27840	COG1250	3-hydroxyacyl-CoA dehydrogenase
CAB88_RS27845	COG0183	Belongs to the thiolase family
CAB88_RS27850	COG0247	lactate metabolic process
CAB88_RS27850	COG2181	nitrate reductase activity
CAB88_RS27855	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CAB88_RS27865	COG5001	Diguanylate cyclase
CAB88_RS27865	COG3300	MHYT domain
CAB88_RS27880	COG3227	Zinc metalloprotease (Elastase)
CAB88_RS27885	COG2197	response regulator
CAB88_RS27890	COG4585	Histidine kinase
CAB88_RS27895	COG0842	Transport permease protein
CAB88_RS27900	COG1131	(ABC) transporter
CAB88_RS27905	COG0024	Methionine aminopeptidase
CAB88_RS27915	COG2234	aminopeptidase activity
CAB88_RS27935	COG1595	DNA-templated transcription, initiation
CAB88_RS27950	COG4506	Protein conserved in bacteria
CAB88_RS27955	COG1619	proteins homologs of microcin C7 resistance protein MccF
CAB88_RS27985	COG2814	Major facilitator Superfamily
CAB88_RS27990	COG0789	Transcriptional regulator
CAB88_RS27995	COG0584	glycerophosphoryl diester phosphodiesterase
CAB88_RS28000	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CAB88_RS28010	COG1994	Peptidase M50
CAB88_RS28020	COG1078	dGTPase activity
CAB88_RS28025	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CAB88_RS28030	COG1120	ATPase activity
CAB88_RS28035	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_RS28040	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_RS28060	COG0280	phosphate acetyltransferase
CAB88_RS28075	COG3773	Cell wall hydrolase
CAB88_RS28085	COG2363	Small membrane protein
CAB88_RS28095	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CAB88_RS28100	COG2233	PERMEase
CAB88_RS28105	COG0561	phosphatase activity
CAB88_RS28110	COG2814	Major facilitator Superfamily
CAB88_RS28120	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CAB88_RS28125	COG1131	(ABC) transporter
CAB88_RS28130	COG2755	lipolytic protein G-D-S-L family
CAB88_RS28135	COG1609	Transcriptional regulator
CAB88_RS28145	COG0460	homoserine dehydrogenase
CAB88_RS28155	COG2873	o-acetylhomoserine
CAB88_RS28165	COG1011	Hydrolase
CAB88_RS28170	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CAB88_RS28180	COG2197	response regulator
CAB88_RS28185	COG2203	Gaf domain
CAB88_RS28185	COG4585	Histidine kinase
CAB88_RS28190	COG0351	phosphomethylpyrimidine kinase
CAB88_RS28195	COG3706	GGDEF domain
CAB88_RS28200	COG2879	small protein
CAB88_RS28205	COG1966	Carbon starvation protein
CAB88_RS28210	COG3279	Response regulator of the LytR AlgR family
CAB88_RS28215	COG0477	Major facilitator Superfamily
CAB88_RS28230	COG0438	transferase activity, transferring glycosyl groups
CAB88_RS28245	COG0840	transmembrane signaling receptor activity
CAB88_RS28255	COG1607	acyl-coa hydrolase
CAB88_RS28260	COG1216	Glycosyl transferase, family 2
CAB88_RS28270	COG1216	Glycosyl transferase, family 2
CAB88_RS28280	COG4485	Bacterial membrane protein, YfhO
CAB88_RS28285	COG0463	Glycosyl transferase, family 2
CAB88_RS28295	COG1309	transcriptional regulator
CAB88_RS28300	COG0488	(ABC) transporter
CAB88_RS28305	COG1309	transcriptional regulator
CAB88_RS28310	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CAB88_RS28315	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CAB88_RS28315	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CAB88_RS28320	COG0628	permease
CAB88_RS28340	COG3275	phosphorelay sensor kinase activity
CAB88_RS28345	COG2814	Major facilitator Superfamily
CAB88_RS28350	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CAB88_RS28355	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
CAB88_RS28385	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CAB88_RS28390	COG1272	protein, Hemolysin III
CAB88_RS28410	COG1164	Oligoendopeptidase f
CAB88_RS28420	COG5002	protein histidine kinase activity
CAB88_RS28435	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CAB88_RS28440	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CAB88_RS28445	COG4853	Protein conserved in bacteria
CAB88_RS28455	COG5002	protein histidine kinase activity
CAB88_RS28460	COG0745	RESPONSE REGULATOR receiver
CAB88_RS28490	COG0305	Participates in initiation and elongation during chromosome replication
CAB88_RS28500	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
CAB88_RS28505	COG4241	membrane
CAB88_RS28515	COG0629	single-stranded DNA binding
CAB88_RS28525	COG0012	GTP binding
CAB88_RS28530	COG4481	Protein conserved in bacteria
CAB88_RS28535	COG0668	transmembrane transport
CAB88_RS28545	COG1475	DNA binding
CAB88_RS28550	COG1192	Involved in chromosome partitioning
CAB88_RS28575	COG1847	R3H domain protein
CAB88_RS28580	COG0706	membrane insertase activity
CAB88_RS28590	COG0230	Belongs to the bacterial ribosomal protein bL34 family
CAB88_RS28600	COG0592	DNA-directed DNA polymerase activity
CAB88_RS28605	COG2501	S4 domain
CAB88_RS28615	COG0187	DNA topoisomerase II activity
CAB88_RS28620	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CAB88_RS28655	COG0517	IMP dehydrogenase activity
CAB88_RS28655	COG0516	GMP reductase activity
CAB88_RS28660	COG1686	Belongs to the peptidase S11 family
CAB88_RS28690	COG1428	Deoxynucleoside kinase
CAB88_RS28695	COG1428	Deoxynucleoside kinase
CAB88_RS28700	COG1335	isochorismatase
CAB88_RS28710	COG0590	tRNA wobble adenosine to inosine editing
CAB88_RS28720	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CAB88_RS28780	COG1982	Orn Lys Arg decarboxylase major
CAB88_RS28790	COG0470	DNA polymerase III
CAB88_RS28795	COG1774	PSP1 C-terminal conserved region
CAB88_RS28805	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CAB88_RS28815	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CAB88_RS28820	COG2002	toxin-antitoxin pair type II binding
CAB88_RS28830	COG0084	hydrolase, TatD family'
CAB88_RS28850	COG4466	Protein conserved in bacteria
CAB88_RS28865	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CAB88_RS28870	COG0251	oxidation-reduction process
CAB88_RS28900	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CAB88_RS28905	COG2002	toxin-antitoxin pair type II binding
CAB88_RS28910	COG2244	polysaccharide biosynthetic process
CAB88_RS28915	COG3956	TIGRFAM MazG family protein
CAB88_RS28920	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CAB88_RS28940	COG1098	S1 RNA binding domain
CAB88_RS28955	COG2208	phosphoserine phosphatase activity
CAB88_RS28965	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
CAB88_RS28970	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CAB88_RS28985	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CAB88_RS28990	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CAB88_RS28995	COG0512	Glutamine amidotransferase of anthranilate synthase
CAB88_RS29000	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CAB88_RS29005	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CAB88_RS29010	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CAB88_RS29015	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CAB88_RS29020	COG1396	sequence-specific DNA binding
CAB88_RS29025	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CAB88_RS29140	COG1136	(ABC) transporter
CAB88_RS29150	COG3344	reverse transcriptase
CAB88_RS29160	COG1136	(ABC) transporter
CAB88_RS29160	COG0577	efflux transmembrane transporter activity
CAB88_RS29205	COG3344	reverse transcriptase
CAB88_RS29460	COG3331	DNA recombination
CAB88_RS29500	COG3344	reverse transcriptase
CAB88_RS29520	COG3344	reverse transcriptase
CAB88_RS29535	COG3344	reverse transcriptase
CAB88_RS29585	COG2311	Membrane
CAB88_RS29630	COG1378	Sugar-specific transcriptional regulator TrmB
CAB88_RS29645	COG0531	amino acid
CAB88_RS29655	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CAB88_RS29660	COG2808	Putative FMN-binding domain
CAB88_RS29665	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_RS29670	COG2364	Membrane
CAB88_RS29675	COG1846	Transcriptional regulator
CAB88_RS29680	COG0456	acetyltransferase
CAB88_RS29700	COG0583	DNA-binding transcription factor activity
CAB88_RS29705	COG0367	asparagine synthase
CAB88_RS29715	COG0367	asparagine synthase
CAB88_RS29720	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CAB88_RS29745	COG1819	glycosyl
CAB88_RS29755	COG0789	Transcriptional regulator
CAB88_RS29760	COG5504	Zn-dependent protease
CAB88_RS29775	COG3344	reverse transcriptase
CAB88_RS29785	COG2072	flavoprotein involved in K transport
CAB88_RS29790	COG0697	spore germination
CAB88_RS29795	COG1522	sequence-specific DNA binding
CAB88_RS29845	COG0776	regulation of translation
CAB88_RS29850	COG2002	toxin-antitoxin pair type II binding
CAB88_RS29875	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_RS29895	COG0697	spore germination
CAB88_RS29905	COG1802	Transcriptional regulator
CAB88_RS29910	COG0697	spore germination
CAB88_RS29920	COG2211	Major facilitator Superfamily
CAB88_RS29925	COG2366	antibiotic biosynthetic process
CAB88_RS29975	COG2423	ornithine cyclodeaminase activity
CAB88_RS29990	COG0776	regulation of translation
CAB88_RS30005	COG2002	toxin-antitoxin pair type II binding
CAB88_RS30010	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CAB88_RS30015	COG0438	transferase activity, transferring glycosyl groups
CAB88_RS30020	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CAB88_RS30035	COG0438	transferase activity, transferring glycosyl groups
CAB88_RS30040	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CAB88_RS30045	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CAB88_RS30050	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CAB88_RS30055	COG3104	oligopeptide transport
CAB88_RS30065	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_RS30075	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS30110	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CAB88_RS30165	COG4935	Belongs to the peptidase S8 family
CAB88_RS30165	COG1404	Belongs to the peptidase S8 family
CAB88_RS30180	COG1404	Belongs to the peptidase S8 family
CAB88_RS30215	COG2304	oxidoreductase activity
CAB88_RS30220	COG1309	transcriptional regulator
CAB88_RS30225	COG2814	Major facilitator Superfamily
CAB88_RS30230	COG1760	l-serine dehydratase
CAB88_RS30235	COG1760	l-serine dehydratase
CAB88_RS30240	COG0814	amino acid
CAB88_RS30255	COG0840	transmembrane signaling receptor activity
CAB88_RS30285	COG1278	Cold shock
CAB88_RS30300	COG1329	Transcriptional regulator
CAB88_RS30325	COG0697	spore germination
CAB88_RS30330	COG1802	Transcriptional regulator
CAB88_RS30345	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CAB88_RS30350	COG0772	Belongs to the SEDS family
CAB88_RS30355	COG2239	Acts as a magnesium transporter
CAB88_RS30365	COG1876	peptidase activity
CAB88_RS30370	COG3409	Peptidoglycan-binding domain 1 protein
CAB88_RS30370	COG0860	N-Acetylmuramoyl-L-alanine amidase
CAB88_RS30390	COG5634	Uncharacterized conserved protein (DUF2278)
CAB88_RS30395	COG1404	Belongs to the peptidase S8 family
CAB88_RS30415	COG4974	Belongs to the 'phage' integrase family
CAB88_RS30455	COG5002	protein histidine kinase activity
CAB88_RS30460	COG0745	RESPONSE REGULATOR receiver
CAB88_RS30465	COG0657	acetylesterase activity
CAB88_RS30475	COG2814	Major facilitator Superfamily
CAB88_RS30480	COG1309	transcriptional regulator
CAB88_RS30510	COG2259	Doxx family
CAB88_RS30515	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_RS30540	COG2814	Major facilitator Superfamily
CAB88_RS30555	COG2205	protein histidine kinase activity
CAB88_RS30560	COG0745	RESPONSE REGULATOR receiver
CAB88_RS30570	COG1136	(ABC) transporter
CAB88_RS30590	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CAB88_RS30595	COG1252	NADH dehydrogenase
CAB88_RS30610	COG4641	Protein conserved in bacteria
CAB88_RS30640	COG2089	acid synthase
CAB88_RS30655	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
CAB88_RS30660	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CAB88_RS30665	COG1088	dTDP-glucose 4,6-dehydratase activity
CAB88_RS30670	COG1086	Polysaccharide biosynthesis protein
CAB88_RS30675	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CAB88_RS30680	COG0463	Glycosyl transferase, family 2
CAB88_RS30685	COG0463	Glycosyl transferase, family 2
CAB88_RS30695	COG0457	Tetratricopeptide repeat
CAB88_RS30755	COG0494	nUDIX hydrolase
CAB88_RS30770	COG4974	Belongs to the 'phage' integrase family
CAB88_RS30805	COG0730	response to heat
CAB88_RS30840	COG0582	viral genome integration into host DNA
CAB88_RS30845	COG0567	Dehydrogenase, E1 component
CAB88_RS30850	COG0471	metal ion transport
CAB88_RS30880	COG4565	transcriptional regulatory protein
CAB88_RS30885	COG3290	protein histidine kinase activity
CAB88_RS30910	COG0457	Tetratricopeptide repeat
CAB88_RS30945	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CAB88_RS31025	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CAB88_RS31050	COG0730	response to heat
CAB88_RS31060	COG0730	response to heat
CAB88_RS31115	COG0457	Tetratricopeptide repeat
CAB88_RS31140	COG1131	(ABC) transporter
CAB88_RS31145	COG1132	(ABC) transporter
CAB88_RS31165	COG1475	DNA binding
CAB88_RS31195	COG0738	Major facilitator superfamily
CAB88_RS31200	COG0673	inositol 2-dehydrogenase activity
CAB88_RS31205	COG0561	phosphatase activity
CAB88_RS31210	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CAB88_RS31215	COG1609	Transcriptional regulator
CAB88_RS31250	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CAB88_RS31255	COG3321	synthase
CAB88_RS31255	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CAB88_RS31255	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_RS31255	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS31255	COG0300	oxidoreductase activity
CAB88_RS31270	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CAB88_RS31275	COG1250	3-hydroxyacyl-CoA dehydrogenase
CAB88_RS31290	COG1960	acyl-CoA dehydrogenase activity
CAB88_RS31310	COG3321	synthase
CAB88_RS31310	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS31310	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CAB88_RS31310	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_RS31310	COG0300	oxidoreductase activity
CAB88_RS31310	COG0300	oxidoreductase activity
CAB88_RS31310	COG3321	synthase
CAB88_RS31310	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_RS31310	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_RS31310	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CAB88_RS31330	COG0791	NLP P60 protein
CAB88_RS31330	COG1388	LysM domain
CAB88_RS31335	COG1388	LysM domain
CAB88_RS31335	COG3584	3D domain protein
CAB88_RS31375	COG5632	N-Acetylmuramoyl-L-alanine amidase
CAB88_RS31390	COG1388	LysM domain
CAB88_RS31390	COG3409	Peptidoglycan-binding domain 1 protein
CAB88_RS31390	COG5632	N-Acetylmuramoyl-L-alanine amidase
CAB88_RS31395	COG0739	heme binding
CAB88_RS31430	COG5634	Uncharacterized conserved protein (DUF2278)
CAB88_RS31435	COG2234	aminopeptidase activity
CAB88_RS31460	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CAB88_RS31485	COG0542	response to heat
CAB88_RS31490	COG0494	nUDIX hydrolase
CAB88_RS31495	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CAB88_RS31505	COG0457	Tetratricopeptide repeat
CAB88_RS31555	COG1132	(ABC) transporter
CAB88_RS31655	COG3344	reverse transcriptase
CAB88_RS31725	COG0739	heme binding
CAB88_RS31770	COG0457	Tetratricopeptide repeat
CAB88_RS32030	COG0776	regulation of translation
CAB88_RS32080	COG0778	Nitroreductase
CAB88_RS32080	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
CAB88_RS32090	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CAB88_RS32130	COG4974	Belongs to the 'phage' integrase family
CAB88_RS32200	COG0791	NLP P60 protein
CAB88_RS32200	COG0741	lytic transglycosylase activity
CAB88_RS32210	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_RS32290	COG3331	DNA recombination
CAB88_RS32470	COG0457	Tetratricopeptide repeat
CAB88_RS32475	COG5632	N-Acetylmuramoyl-L-alanine amidase
CAB88_RS32505	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_RS32615	COG4653	Phage capsid family
CAB88_RS32620	COG0338	D12 class N6 adenine-specific DNA methyltransferase
CAB88_RS32665	COG3344	reverse transcriptase
CAB88_RS32685	COG3331	DNA recombination
CAB88_RS32970	COG0457	Tetratricopeptide repeat
CAB88_RS32980	COG1923	regulation of RNA biosynthetic process
CAB88_RS33065	COG5632	N-Acetylmuramoyl-L-alanine amidase
CAB88_RS33065	COG3409	Peptidoglycan-binding domain 1 protein
CAB88_RS33230	COG3344	reverse transcriptase
CAB88_RS33265	COG0741	lytic transglycosylase activity
CAB88_RS33265	COG0791	NLP P60 protein