CAB88_RS00125	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS00125	SM00930	CAB88_RS00125
CAB88_RS00135	SM00829	Enoylreductase
CAB88_RS00190	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS00195	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS00295	SM00563	Phosphate acyltransferases
CAB88_RS00310	SM00354	helix_turn _helix lactose operon repressor
CAB88_RS00365	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS00395	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS00400	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS00475	SM00487	DEAD-like helicases superfamily
CAB88_RS00475	SM00490	helicase superfamily c-terminal domain
CAB88_RS00500	SM01005	Alanine racemase, C-terminal domain
CAB88_RS00515	SM00316	Ribosomal protein S1-like RNA-binding domain
CAB88_RS00515	SM00732	Likely ribonuclease with RNase H fold.
CAB88_RS00525	SM00731	SprT homologues.
CAB88_RS00635	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS00640	SM00881	CoA binding domain
CAB88_RS00655	SM00883	Chaperonin 10 Kd subunit
CAB88_RS00670	SM00860	SMI1 / KNR4 family
CAB88_RS00685	SM00448	cheY-homologous receiver domain
CAB88_RS00685	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS00690	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS00690	SM00387	Histidine kinase-like ATPases
CAB88_RS00690	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS00745	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS00830	SM01001	AIR carboxylase
CAB88_RS00840	SM00998	Adenylosuccinate lyase C-terminus
CAB88_RS00855	SM01211	CAB88_RS00855
CAB88_RS00880	SM00798	AICARFT/IMPCHase bienzyme
CAB88_RS00880	SM00851	MGS-like domain
CAB88_RS00885	SM01209	CAB88_RS00885
CAB88_RS00885	SM01210	CAB88_RS00885
CAB88_RS00905	SM00244	prohibitin homologues
CAB88_RS00925	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CAB88_RS00925	SM00292	breast cancer carboxy-terminal domain
CAB88_RS00925	SM00532	Ligase N family
CAB88_RS00950	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS00950	SM00930	CAB88_RS00950
CAB88_RS00980	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS01000	SM00845	GatB domain
CAB88_RS01005	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CAB88_RS01020	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS01085	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAB88_RS01135	SM01007	Class II Aldolase and Adducin N-terminal domain
CAB88_RS01205	SM00387	Histidine kinase-like ATPases
CAB88_RS01205	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS01250	SM00062	Bacterial periplasmic substrate-binding proteins
CAB88_RS01250	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CAB88_RS01255	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS01260	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAB88_RS01260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS01290	SM00100	Cyclic nucleotide-monophosphate binding domain
CAB88_RS01290	SM00419	helix_turn_helix, cAMP Regulatory protein
CAB88_RS01305	SM00642	Alpha-amylase domain
CAB88_RS01325	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CAB88_RS01325	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CAB88_RS01325	SM00493	CAB88_RS01325
CAB88_RS01345	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAB88_RS01345	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS01370	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS01375	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS01380	SM00060	Fibronectin type 3 domain
CAB88_RS01380	SM00636	CAB88_RS01380
CAB88_RS01380	SM00637	CAB88_RS01380
CAB88_RS01420	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS01440	SM00946	Prolyl-tRNA synthetase, C-terminal
CAB88_RS01485	SM00831	Cation transporter/ATPase, N-terminus
CAB88_RS01495	SM00226	Low molecular weight phosphatase family
CAB88_RS01590	SM00478	endonuclease III
CAB88_RS01610	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS01630	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS01680	SM00984	UDP binding domain
CAB88_RS01765	SM00478	endonuclease III
CAB88_RS01765	SM00525	CAB88_RS01765
CAB88_RS01790	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS01810	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS01975	SM00567	E-Z type HEAT repeats
CAB88_RS01990	SM00052	Putative diguanylate phosphodiesterase
CAB88_RS01990	SM00091	PAS domain
CAB88_RS01990	SM00267	diguanylate cyclase
CAB88_RS02000	SM00763	PrkA AAA domain
CAB88_RS02015	SM00365	Leucine-rich repeat, SDS22-like subfamily
CAB88_RS02015	SM00369	Leucine-rich repeats, typical (most populated) subfamily
CAB88_RS02015	SM00725	NEAr Transporter domain
CAB88_RS02030	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CAB88_RS02040	SM00244	prohibitin homologues
CAB88_RS02045	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAB88_RS02045	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS02050	SM00091	PAS domain
CAB88_RS02050	SM00387	Histidine kinase-like ATPases
CAB88_RS02055	SM00448	cheY-homologous receiver domain
CAB88_RS02075	SM00248	ankyrin repeats
CAB88_RS02090	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS02115	SM00448	cheY-homologous receiver domain
CAB88_RS02115	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS02120	SM00387	Histidine kinase-like ATPases
CAB88_RS02120	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS02135	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAB88_RS02135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS02140	SM00387	Histidine kinase-like ATPases
CAB88_RS02145	SM00448	cheY-homologous receiver domain
CAB88_RS02155	SM00919	Malic enzyme, NAD binding domain
CAB88_RS02155	SM01274	CAB88_RS02155
CAB88_RS02170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS02180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS02180	SM00387	Histidine kinase-like ATPases
CAB88_RS02180	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS02185	SM00448	cheY-homologous receiver domain
CAB88_RS02185	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS02205	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CAB88_RS02205	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CAB88_RS02220	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CAB88_RS02220	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CAB88_RS02230	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS02305	SM01091	Transporter associated domain
CAB88_RS02325	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS02355	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS02370	SM00507	HNH nucleases
CAB88_RS02390	SM00327	von Willebrand factor (vWF) type A domain
CAB88_RS02395	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS02400	SM00155	Phospholipase D. Active site motifs.
CAB88_RS02415	SM00052	Putative diguanylate phosphodiesterase
CAB88_RS02415	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CAB88_RS02415	SM00267	diguanylate cyclase
CAB88_RS02425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS02425	SM00866	CAB88_RS02425
CAB88_RS02435	SM00642	Alpha-amylase domain
CAB88_RS02475	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS02480	SM00062	Bacterial periplasmic substrate-binding proteins
CAB88_RS02480	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CAB88_RS02530	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS02530	SM00387	Histidine kinase-like ATPases
CAB88_RS02530	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS02535	SM00448	cheY-homologous receiver domain
CAB88_RS02535	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS02585	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS02590	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS02600	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS02610	SM00354	helix_turn _helix lactose operon repressor
CAB88_RS02625	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS02660	SM00829	Enoylreductase
CAB88_RS02670	SM00770	Zinc dependent phospholipase C (alpha toxin)
CAB88_RS02690	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS02700	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS02750	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS02790	SM01040	BRO family, N-terminal domain
CAB88_RS02815	SM00857	Resolvase, N terminal domain
CAB88_RS02910	SM00287	Bacterial SH3 domain homologues
CAB88_RS02910	SM00644	CAB88_RS02910
CAB88_RS02975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAB88_RS02985	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS03035	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS03125	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS03150	SM00899	CAB88_RS03150
CAB88_RS03300	SM00116	Domain in cystathionine beta-synthase and other proteins.
CAB88_RS03320	SM00287	Bacterial SH3 domain homologues
CAB88_RS03330	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS03425	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS03465	SM00640	Glycosyl hydrolases family 32
CAB88_RS03475	SM00354	helix_turn _helix lactose operon repressor
CAB88_RS03540	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS03560	SM00450	Rhodanese Homology Domain
CAB88_RS03570	SM00450	Rhodanese Homology Domain
CAB88_RS03575	SM00450	Rhodanese Homology Domain
CAB88_RS03575	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS03585	SM00450	Rhodanese Homology Domain
CAB88_RS03590	SM00450	Rhodanese Homology Domain
CAB88_RS03615	SM00829	Enoylreductase
CAB88_RS03670	SM00287	Bacterial SH3 domain homologues
CAB88_RS03680	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS03735	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
CAB88_RS03835	SM00344	helix_turn_helix ASNC type
CAB88_RS03850	SM00422	helix_turn_helix, mercury resistance
CAB88_RS03910	SM01060	CAB88_RS03910
CAB88_RS03955	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS03960	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS03970	SM00062	Bacterial periplasmic substrate-binding proteins
CAB88_RS03970	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CAB88_RS03980	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS04060	SM00644	CAB88_RS04060
CAB88_RS04065	SM00729	Elongator protein 3, MiaB family, Radical SAM
CAB88_RS04100	SM00047	Lysozyme subfamily 2
CAB88_RS04140	SM00646	CAB88_RS04140
CAB88_RS04185	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS04190	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS04220	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS04250	SM00091	PAS domain
CAB88_RS04250	SM00387	Histidine kinase-like ATPases
CAB88_RS04255	SM00448	cheY-homologous receiver domain
CAB88_RS04270	SM00487	DEAD-like helicases superfamily
CAB88_RS04270	SM00490	helicase superfamily c-terminal domain
CAB88_RS04340	SM00894	Excalibur calcium-binding domain
CAB88_RS04405	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS04430	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS04455	SM01120	CAB88_RS04455
CAB88_RS04460	SM00287	Bacterial SH3 domain homologues
CAB88_RS04485	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS04495	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS04520	SM00460	Transglutaminase/protease-like homologues
CAB88_RS04625	SM00331	Sigma factor PP2C-like phosphatases
CAB88_RS04625	SM00448	cheY-homologous receiver domain
CAB88_RS04630	SM00138	Methyltransferase, chemotaxis proteins 
CAB88_RS04635	SM00387	Histidine kinase-like ATPases
CAB88_RS04635	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS04635	SM00448	cheY-homologous receiver domain
CAB88_RS04675	SM00507	HNH nucleases
CAB88_RS04680	SM00829	Enoylreductase
CAB88_RS04715	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CAB88_RS04785	SM00835	Cupin
CAB88_RS04790	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS04875	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS04895	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS05105	SM00354	helix_turn _helix lactose operon repressor
CAB88_RS05115	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS05155	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS05175	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CAB88_RS05190	SM00342	helix_turn_helix, arabinose operon control protein
CAB88_RS05190	SM00871	Bacterial transcription activator, effector binding domain
CAB88_RS05210	SM00387	Histidine kinase-like ATPases
CAB88_RS05210	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS05215	SM00448	cheY-homologous receiver domain
CAB88_RS05215	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS05240	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAB88_RS05240	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS05280	SM00357	Cold shock protein domain
CAB88_RS05395	SM01060	CAB88_RS05395
CAB88_RS05410	SM00642	Alpha-amylase domain
CAB88_RS05415	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS05430	SM00316	Ribosomal protein S1-like RNA-binding domain
CAB88_RS05475	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS05475	SM01086	C-terminal, D2-small domain, of ClpB protein
CAB88_RS05505	SM00825	Beta-ketoacyl synthase
CAB88_RS05550	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS05555	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS05600	SM00155	Phospholipase D. Active site motifs.
CAB88_RS05640	SM01118	CAB88_RS05640
CAB88_RS05650	SM00954	Region found in RelA / SpoT proteins
CAB88_RS05880	SM01324	CAB88_RS05880
CAB88_RS05935	SM00861	Transketolase, pyrimidine binding domain
CAB88_RS05940	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS06040	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS06060	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS06080	SM00014	Acid phosphatase homologues
CAB88_RS06130	SM00448	cheY-homologous receiver domain
CAB88_RS06130	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS06135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS06135	SM00387	Histidine kinase-like ATPases
CAB88_RS06135	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS06140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS06140	SM00895	CAB88_RS06140
CAB88_RS06210	SM00822	CAB88_RS06210
CAB88_RS06250	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS06275	SM00420	helix_turn_helix, Deoxyribose operon repressor
CAB88_RS06275	SM01134	CAB88_RS06275
CAB88_RS06285	SM00365	Leucine-rich repeat, SDS22-like subfamily
CAB88_RS06285	SM00369	Leucine-rich repeats, typical (most populated) subfamily
CAB88_RS06285	SM00725	NEAr Transporter domain
CAB88_RS06290	SM01007	Class II Aldolase and Adducin N-terminal domain
CAB88_RS06310	SM00387	Histidine kinase-like ATPases
CAB88_RS06310	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS06315	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS06335	SM00387	Histidine kinase-like ATPases
CAB88_RS06335	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS06415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS06420	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS06430	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS06450	SM00344	helix_turn_helix ASNC type
CAB88_RS06575	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS06650	SM00917	LeuA allosteric (dimerisation) domain
CAB88_RS06655	SM01329	CAB88_RS06655
CAB88_RS06840	SM00387	Histidine kinase-like ATPases
CAB88_RS06845	SM00421	helix_turn_helix, Lux Regulon
CAB88_RS06845	SM00448	cheY-homologous receiver domain
CAB88_RS06940	SM00091	PAS domain
CAB88_RS06940	SM00387	Histidine kinase-like ATPases
CAB88_RS06940	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS06960	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS06960	SM00387	Histidine kinase-like ATPases
CAB88_RS06960	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS07015	SM00363	S4 RNA-binding domain
CAB88_RS07035	SM00448	cheY-homologous receiver domain
CAB88_RS07035	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS07040	SM00091	PAS domain
CAB88_RS07040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS07040	SM00387	Histidine kinase-like ATPases
CAB88_RS07040	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS07050	SM00257	Lysin motif
CAB88_RS07075	SM00487	DEAD-like helicases superfamily
CAB88_RS07075	SM00490	helicase superfamily c-terminal domain
CAB88_RS07085	SM00257	Lysin motif
CAB88_RS07095	SM00422	helix_turn_helix, mercury resistance
CAB88_RS07105	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CAB88_RS07120	SM00644	CAB88_RS07120
CAB88_RS07130	SM00870	CAB88_RS07130
CAB88_RS07145	SM00316	Ribosomal protein S1-like RNA-binding domain
CAB88_RS07150	SM01240	CAB88_RS07150
CAB88_RS07205	SM00411	bacterial (prokaryotic) histone like domain
CAB88_RS07230	SM00562	CAB88_RS07230
CAB88_RS07250	SM00028	Tetratricopeptide repeats
CAB88_RS07255	SM00914	CAB88_RS07255
CAB88_RS07300	SM00986	Uracil DNA glycosylase superfamily
CAB88_RS07300	SM00987	UreE urease accessory protein, C-terminal domain 
CAB88_RS07320	SM00851	MGS-like domain
CAB88_RS07370	SM00479	CAB88_RS07370
CAB88_RS07370	SM00487	DEAD-like helicases superfamily
CAB88_RS07370	SM00491	CAB88_RS07370
CAB88_RS07395	SM00478	endonuclease III
CAB88_RS07405	SM00060	Fibronectin type 3 domain
CAB88_RS07465	SM00981	CAB88_RS07465
CAB88_RS07475	SM00491	CAB88_RS07475
CAB88_RS07535	SM00450	Rhodanese Homology Domain
CAB88_RS07575	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CAB88_RS07575	SM00475	5'-3' exonuclease
CAB88_RS07685	SM00357	Cold shock protein domain
CAB88_RS07735	SM00422	helix_turn_helix, mercury resistance
CAB88_RS07735	SM00871	Bacterial transcription activator, effector binding domain
CAB88_RS07785	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS07830	SM00448	cheY-homologous receiver domain
CAB88_RS07835	SM00073	Histidine Phosphotransfer domain
CAB88_RS07835	SM00260	Two component signalling adaptor domain
CAB88_RS07835	SM00387	Histidine kinase-like ATPases
CAB88_RS07835	SM01231	CAB88_RS07835
CAB88_RS07855	SM00138	Methyltransferase, chemotaxis proteins 
CAB88_RS07930	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS07965	SM00260	Two component signalling adaptor domain
CAB88_RS07965	SM00448	cheY-homologous receiver domain
CAB88_RS08035	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS08035	SM00962	SRP54-type protein, GTPase domain
CAB88_RS08050	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CAB88_RS08100	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS08120	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS08135	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS08135	SM01027	Beta-Casp domain
CAB88_RS08175	SM00855	Phosphoglycerate mutase family
CAB88_RS08195	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS08235	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS08235	SM00895	CAB88_RS08235
CAB88_RS08250	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CAB88_RS08280	SM00422	helix_turn_helix, mercury resistance
CAB88_RS08345	SM00028	Tetratricopeptide repeats
CAB88_RS08355	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS08395	SM00421	helix_turn_helix, Lux Regulon
CAB88_RS08395	SM00448	cheY-homologous receiver domain
CAB88_RS08405	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS08420	SM00155	Phospholipase D. Active site motifs.
CAB88_RS08440	SM00919	Malic enzyme, NAD binding domain
CAB88_RS08440	SM01274	CAB88_RS08440
CAB88_RS08445	SM00387	Histidine kinase-like ATPases
CAB88_RS08450	SM00448	cheY-homologous receiver domain
CAB88_RS08455	SM00487	DEAD-like helicases superfamily
CAB88_RS08455	SM00490	helicase superfamily c-terminal domain
CAB88_RS08475	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS08670	SM00854	Bacterial capsule synthesis protein PGA_cap
CAB88_RS08700	SM00850	LytTr DNA-binding domain
CAB88_RS08745	SM00448	cheY-homologous receiver domain
CAB88_RS08745	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS08750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS08750	SM00387	Histidine kinase-like ATPases
CAB88_RS08750	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS08770	SM00450	Rhodanese Homology Domain
CAB88_RS08810	SM01276	CAB88_RS08810
CAB88_RS08860	SM01133	CAB88_RS08860
CAB88_RS08870	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CAB88_RS08915	SM01011	Aminopeptidase P, N-terminal domain
CAB88_RS08940	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CAB88_RS08940	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CAB88_RS08940	SM00493	CAB88_RS08940
CAB88_RS09015	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS09035	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS09040	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS09100	SM00487	DEAD-like helicases superfamily
CAB88_RS09100	SM00490	helicase superfamily c-terminal domain
CAB88_RS09120	SM00482	DNA polymerase A domain
CAB88_RS09210	SM00966	SpoVT / AbrB like domain 
CAB88_RS09245	SM00857	Resolvase, N terminal domain
CAB88_RS09380	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS09425	SM00857	Resolvase, N terminal domain
CAB88_RS09465	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CAB88_RS09475	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS09480	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS09515	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS09535	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS09540	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS09605	SM00287	Bacterial SH3 domain homologues
CAB88_RS09615	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS09620	SM00448	cheY-homologous receiver domain
CAB88_RS09620	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS09625	SM00387	Histidine kinase-like ATPases
CAB88_RS09625	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS09705	SM00448	cheY-homologous receiver domain
CAB88_RS09705	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS09710	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS09710	SM00387	Histidine kinase-like ATPases
CAB88_RS09710	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS09780	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS09805	SM00460	Transglutaminase/protease-like homologues
CAB88_RS09830	SM00966	SpoVT / AbrB like domain 
CAB88_RS09840	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS09875	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAB88_RS09875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS09940	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CAB88_RS09995	SM00855	Phosphoglycerate mutase family
CAB88_RS10050	SM00155	Phospholipase D. Active site motifs.
CAB88_RS10075	SM01091	Transporter associated domain
CAB88_RS10165	SM00244	prohibitin homologues
CAB88_RS10175	SM00855	Phosphoglycerate mutase family
CAB88_RS10185	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS10200	SM01005	Alanine racemase, C-terminal domain
CAB88_RS10230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS10350	SM00487	DEAD-like helicases superfamily
CAB88_RS10350	SM00490	helicase superfamily c-terminal domain
CAB88_RS10370	SM00829	Enoylreductase
CAB88_RS10390	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS10405	SM00460	Transglutaminase/protease-like homologues
CAB88_RS10420	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CAB88_RS10440	SM00100	Cyclic nucleotide-monophosphate binding domain
CAB88_RS10440	SM00419	helix_turn_helix, cAMP Regulatory protein
CAB88_RS10445	SM00729	Elongator protein 3, MiaB family, Radical SAM
CAB88_RS10455	SM00852	Probable molybdopterin binding domain
CAB88_RS10575	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CAB88_RS10580	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS10610	SM00567	E-Z type HEAT repeats
CAB88_RS10610	SM00932	Scaffold protein Nfu/NifU N terminal
CAB88_RS10630	SM00836	DALR anticodon binding domain
CAB88_RS10630	SM01016	Arginyl tRNA synthetase N terminal dom
CAB88_RS10640	SM00028	Tetratricopeptide repeats
CAB88_RS10685	SM00327	von Willebrand factor (vWF) type A domain
CAB88_RS10700	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS10710	SM00028	Tetratricopeptide repeats
CAB88_RS10830	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS10845	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS10900	SM00563	Phosphate acyltransferases
CAB88_RS10965	SM00646	CAB88_RS10965
CAB88_RS11010	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CAB88_RS11015	SM00421	helix_turn_helix, Lux Regulon
CAB88_RS11015	SM00448	cheY-homologous receiver domain
CAB88_RS11030	SM00829	Enoylreductase
CAB88_RS11050	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS11070	SM01350	CAB88_RS11070
CAB88_RS11105	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS11145	SM01091	Transporter associated domain
CAB88_RS11160	SM00387	Histidine kinase-like ATPases
CAB88_RS11160	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS11180	SM00882	Coenzyme A transferase
CAB88_RS11185	SM00882	Coenzyme A transferase
CAB88_RS11200	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS11240	SM00219	Tyrosine kinase, catalytic domain
CAB88_RS11250	SM00014	Acid phosphatase homologues
CAB88_RS11445	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS11490	SM00823	Phosphopantetheine attachment site
CAB88_RS11490	SM00824	Thioesterase
CAB88_RS11495	SM00923	MbtH-like protein
CAB88_RS11515	SM00411	bacterial (prokaryotic) histone like domain
CAB88_RS11555	SM00363	S4 RNA-binding domain
CAB88_RS11560	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CAB88_RS11565	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS11600	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS11625	SM00100	Cyclic nucleotide-monophosphate binding domain
CAB88_RS11640	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS11650	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS11670	SM01059	Chloramphenicol acetyltransferase
CAB88_RS11695	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS11735	SM00357	Cold shock protein domain
CAB88_RS11760	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CAB88_RS11800	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS11805	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS11890	SM00507	HNH nucleases
CAB88_RS11915	SM00644	CAB88_RS11915
CAB88_RS11945	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS11970	SM00835	Cupin
CAB88_RS12045	SM01207	CAB88_RS12045
CAB88_RS12060	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS12075	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS12085	SM00487	DEAD-like helicases superfamily
CAB88_RS12085	SM00490	helicase superfamily c-terminal domain
CAB88_RS12095	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS12150	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS12155	SM00855	Phosphoglycerate mutase family
CAB88_RS12225	SM00421	helix_turn_helix, Lux Regulon
CAB88_RS12230	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS12235	SM00966	SpoVT / AbrB like domain 
CAB88_RS12255	SM00936	Penicillin-binding protein 5, C-terminal domain 
CAB88_RS12280	SM00823	Phosphopantetheine attachment site
CAB88_RS12285	SM00823	Phosphopantetheine attachment site
CAB88_RS12320	SM00387	Histidine kinase-like ATPases
CAB88_RS12325	SM00448	cheY-homologous receiver domain
CAB88_RS12360	SM00465	GIY-YIG type nucleases (URI domain)
CAB88_RS12385	SM00342	helix_turn_helix, arabinose operon control protein
CAB88_RS12410	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CAB88_RS12410	SM00091	PAS domain
CAB88_RS12410	SM00387	Histidine kinase-like ATPases
CAB88_RS12410	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS12430	SM01022	CAB88_RS12430
CAB88_RS12550	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS12580	SM00878	Biotin carboxylase C-terminal domain
CAB88_RS12640	SM00387	Histidine kinase-like ATPases
CAB88_RS12640	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS12645	SM00448	cheY-homologous receiver domain
CAB88_RS12645	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS12685	SM00342	helix_turn_helix, arabinose operon control protein
CAB88_RS12715	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS12720	SM00422	helix_turn_helix, mercury resistance
CAB88_RS12720	SM00871	Bacterial transcription activator, effector binding domain
CAB88_RS12740	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS12770	SM00342	helix_turn_helix, arabinose operon control protein
CAB88_RS12785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS12865	SM00448	cheY-homologous receiver domain
CAB88_RS12865	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS12870	SM00387	Histidine kinase-like ATPases
CAB88_RS12890	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS12910	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS12940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS12945	SM01209	CAB88_RS12945
CAB88_RS12995	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS13000	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS13030	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS13145	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS13160	SM00507	HNH nucleases
CAB88_RS13260	SM00644	CAB88_RS13260
CAB88_RS13365	SM00091	PAS domain
CAB88_RS13365	SM00387	Histidine kinase-like ATPases
CAB88_RS13365	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS13395	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS13410	SM00387	Histidine kinase-like ATPases
CAB88_RS13410	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS13455	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS13485	SM00829	Enoylreductase
CAB88_RS13490	SM00014	Acid phosphatase homologues
CAB88_RS13495	SM00740	CAB88_RS13495
CAB88_RS13530	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS13545	SM00422	helix_turn_helix, mercury resistance
CAB88_RS13575	SM00287	Bacterial SH3 domain homologues
CAB88_RS13590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS13655	SM00480	DNA polymerase III beta subunit
CAB88_RS13775	SM00465	GIY-YIG type nucleases (URI domain)
CAB88_RS13845	SM00448	cheY-homologous receiver domain
CAB88_RS13845	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS13850	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS13850	SM00387	Histidine kinase-like ATPases
CAB88_RS13850	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS13865	SM00344	helix_turn_helix ASNC type
CAB88_RS13885	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS13920	SM00642	Alpha-amylase domain
CAB88_RS13940	SM00871	Bacterial transcription activator, effector binding domain
CAB88_RS13965	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS13970	SM00829	Enoylreductase
CAB88_RS14095	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS14115	SM00420	helix_turn_helix, Deoxyribose operon repressor
CAB88_RS14115	SM01134	CAB88_RS14115
CAB88_RS14155	SM00861	Transketolase, pyrimidine binding domain
CAB88_RS14220	SM00116	Domain in cystathionine beta-synthase and other proteins.
CAB88_RS14220	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS14255	SM00060	Fibronectin type 3 domain
CAB88_RS14255	SM00495	Chitin-binding domain type 3
CAB88_RS14365	SM00341	Helicase and RNase D C-terminal
CAB88_RS14365	SM00487	DEAD-like helicases superfamily
CAB88_RS14365	SM00490	helicase superfamily c-terminal domain
CAB88_RS14365	SM00956	CAB88_RS14365
CAB88_RS14395	SM00646	CAB88_RS14395
CAB88_RS14415	SM01131	CAB88_RS14415
CAB88_RS14430	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CAB88_RS14450	SM01130	CAB88_RS14450
CAB88_RS14470	SM00091	PAS domain
CAB88_RS14470	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS14545	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAB88_RS14570	SM00248	ankyrin repeats
CAB88_RS14590	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CAB88_RS14600	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS14600	SM00387	Histidine kinase-like ATPases
CAB88_RS14600	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS14605	SM00448	cheY-homologous receiver domain
CAB88_RS14605	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS14805	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS14810	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS14890	SM00062	Bacterial periplasmic substrate-binding proteins
CAB88_RS14895	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS14920	SM00028	Tetratricopeptide repeats
CAB88_RS14985	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS15015	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS15060	SM00830	Chorismate mutase type II
CAB88_RS15110	SM00287	Bacterial SH3 domain homologues
CAB88_RS15185	SM01133	CAB88_RS15185
CAB88_RS15205	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS15220	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CAB88_RS15240	SM00346	helix_turn_helix isocitrate lyase regulation
CAB88_RS15265	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS15295	SM00098	Alkaline phosphatase homologues
CAB88_RS15305	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS15380	SM01060	CAB88_RS15380
CAB88_RS15420	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS15430	SM00889	Elongation factor G, domain IV
CAB88_RS15445	SM00773	Proposed nucleic acid binding domain
CAB88_RS15455	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS15475	SM00342	helix_turn_helix, arabinose operon control protein
CAB88_RS15475	SM00871	Bacterial transcription activator, effector binding domain
CAB88_RS15500	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS15575	SM00387	Histidine kinase-like ATPases
CAB88_RS15575	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS15580	SM00448	cheY-homologous receiver domain
CAB88_RS15580	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS15590	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS15655	SM00797	Allophanate hydrolase subunit 2
CAB88_RS15660	SM00796	Allophanate hydrolase subunit 1
CAB88_RS15665	SM00346	helix_turn_helix isocitrate lyase regulation
CAB88_RS15685	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS15800	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS15920	SM00226	Low molecular weight phosphatase family
CAB88_RS15935	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS16025	SM00344	helix_turn_helix ASNC type
CAB88_RS16090	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS16110	SM00448	cheY-homologous receiver domain
CAB88_RS16110	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS16115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS16115	SM00387	Histidine kinase-like ATPases
CAB88_RS16115	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS16145	SM00421	helix_turn_helix, Lux Regulon
CAB88_RS16145	SM00448	cheY-homologous receiver domain
CAB88_RS16160	SM00387	Histidine kinase-like ATPases
CAB88_RS16160	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS16165	SM00448	cheY-homologous receiver domain
CAB88_RS16165	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS16275	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS16285	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS16300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS16300	SM00387	Histidine kinase-like ATPases
CAB88_RS16300	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS16305	SM00448	cheY-homologous receiver domain
CAB88_RS16305	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS16375	SM00342	helix_turn_helix, arabinose operon control protein
CAB88_RS16395	SM00644	CAB88_RS16395
CAB88_RS16420	SM00854	Bacterial capsule synthesis protein PGA_cap
CAB88_RS16445	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS16515	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS16565	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS16650	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS16665	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS16730	SM01266	CAB88_RS16730
CAB88_RS16805	SM01091	Transporter associated domain
CAB88_RS16810	SM00422	helix_turn_helix, mercury resistance
CAB88_RS16885	SM01350	CAB88_RS16885
CAB88_RS16890	SM00861	Transketolase, pyrimidine binding domain
CAB88_RS16905	SM00829	Enoylreductase
CAB88_RS16915	SM00829	Enoylreductase
CAB88_RS16935	SM01276	CAB88_RS16935
CAB88_RS16940	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAB88_RS16940	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS17030	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS17045	SM00914	CAB88_RS17045
CAB88_RS17080	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS17080	SM00866	CAB88_RS17080
CAB88_RS17130	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS17195	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS17200	SM00636	CAB88_RS17200
CAB88_RS17245	SM00871	Bacterial transcription activator, effector binding domain
CAB88_RS17250	SM00420	helix_turn_helix, Deoxyribose operon repressor
CAB88_RS17260	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS17285	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS17290	SM00641	Glycosyl hydrolases family 25
CAB88_RS17355	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS17480	SM00829	Enoylreductase
CAB88_RS17485	SM00855	Phosphoglycerate mutase family
CAB88_RS17495	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CAB88_RS17495	SM00534	ATPase domain of DNA mismatch repair MUTS family
CAB88_RS17505	SM00642	Alpha-amylase domain
CAB88_RS17525	SM00422	helix_turn_helix, mercury resistance
CAB88_RS17525	SM00871	Bacterial transcription activator, effector binding domain
CAB88_RS17585	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS17590	SM00829	Enoylreductase
CAB88_RS17600	SM00028	Tetratricopeptide repeats
CAB88_RS17660	SM00148	Phospholipase C, catalytic domain (part); domain X
CAB88_RS17665	SM00060	Fibronectin type 3 domain
CAB88_RS17705	SM00060	Fibronectin type 3 domain
CAB88_RS17705	SM00495	Chitin-binding domain type 3
CAB88_RS17705	SM01276	CAB88_RS17705
CAB88_RS17720	SM00052	Putative diguanylate phosphodiesterase
CAB88_RS17720	SM00091	PAS domain
CAB88_RS17720	SM00267	diguanylate cyclase
CAB88_RS17725	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS17740	SM00646	CAB88_RS17740
CAB88_RS17770	SM00387	Histidine kinase-like ATPases
CAB88_RS17770	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS17775	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CAB88_RS17800	SM00062	Bacterial periplasmic substrate-binding proteins
CAB88_RS17800	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CAB88_RS17805	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS17840	SM00479	CAB88_RS17840
CAB88_RS17845	SM00357	Cold shock protein domain
CAB88_RS17870	SM01022	CAB88_RS17870
CAB88_RS17925	SM00822	CAB88_RS17925
CAB88_RS17980	SM00852	Probable molybdopterin binding domain
CAB88_RS18000	SM00729	Elongator protein 3, MiaB family, Radical SAM
CAB88_RS18020	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CAB88_RS18020	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CAB88_RS18125	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS18135	SM00420	helix_turn_helix, Deoxyribose operon repressor
CAB88_RS18150	SM00434	DNA Topoisomerase IV
CAB88_RS18155	SM00387	Histidine kinase-like ATPases
CAB88_RS18155	SM00433	TopoisomeraseII
CAB88_RS18165	SM00881	CoA binding domain
CAB88_RS18170	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CAB88_RS18175	SM00448	cheY-homologous receiver domain
CAB88_RS18175	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS18190	SM01207	CAB88_RS18190
CAB88_RS18205	SM00257	Lysin motif
CAB88_RS18205	SM00636	CAB88_RS18205
CAB88_RS18225	SM00479	CAB88_RS18225
CAB88_RS18240	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS18285	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CAB88_RS18320	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS18345	SM00644	CAB88_RS18345
CAB88_RS18345	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CAB88_RS18350	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CAB88_RS18370	SM00091	PAS domain
CAB88_RS18370	SM00387	Histidine kinase-like ATPases
CAB88_RS18370	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS18400	SM01058	CarD-like/TRCF domain
CAB88_RS18490	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS18550	SM00287	Bacterial SH3 domain homologues
CAB88_RS18550	SM00641	Glycosyl hydrolases family 25
CAB88_RS18555	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS18560	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS18575	SM00861	Transketolase, pyrimidine binding domain
CAB88_RS18590	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS18595	SM00062	Bacterial periplasmic substrate-binding proteins
CAB88_RS18620	SM00857	Resolvase, N terminal domain
CAB88_RS18645	SM01230	CAB88_RS18645
CAB88_RS18650	SM00422	helix_turn_helix, mercury resistance
CAB88_RS18670	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS18705	SM00287	Bacterial SH3 domain homologues
CAB88_RS18725	SM00420	helix_turn_helix, Deoxyribose operon repressor
CAB88_RS18725	SM01134	CAB88_RS18725
CAB88_RS18760	SM00636	CAB88_RS18760
CAB88_RS18780	SM00411	bacterial (prokaryotic) histone like domain
CAB88_RS18810	SM00421	helix_turn_helix, Lux Regulon
CAB88_RS18825	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS18850	SM00342	helix_turn_helix, arabinose operon control protein
CAB88_RS18860	SM00478	endonuclease III
CAB88_RS18890	SM00052	Putative diguanylate phosphodiesterase
CAB88_RS18890	SM00091	PAS domain
CAB88_RS18890	SM00267	diguanylate cyclase
CAB88_RS18940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS18950	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS18950	SM00866	CAB88_RS18950
CAB88_RS18960	SM00148	Phospholipase C, catalytic domain (part); domain X
CAB88_RS18970	SM00257	Lysin motif
CAB88_RS19000	SM00853	MutL C terminal dimerisation domain
CAB88_RS19000	SM01340	CAB88_RS19000
CAB88_RS19005	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CAB88_RS19005	SM00534	ATPase domain of DNA mismatch repair MUTS family
CAB88_RS19020	SM00729	Elongator protein 3, MiaB family, Radical SAM
CAB88_RS19050	SM00322	K homology RNA-binding domain
CAB88_RS19050	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CAB88_RS19060	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS19065	SM00852	Probable molybdopterin binding domain
CAB88_RS19075	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS19115	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS19125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS19125	SM00866	CAB88_RS19125
CAB88_RS19135	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS19135	SM00843	CAB88_RS19135
CAB88_RS19150	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS19155	SM01130	CAB88_RS19155
CAB88_RS19165	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CAB88_RS19300	SM00507	HNH nucleases
CAB88_RS19410	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS19415	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS19435	SM00857	Resolvase, N terminal domain
CAB88_RS19465	SM00316	Ribosomal protein S1-like RNA-binding domain
CAB88_RS19465	SM00322	K homology RNA-binding domain
CAB88_RS19470	SM01387	CAB88_RS19470
CAB88_RS19475	SM00904	Riboflavin kinase
CAB88_RS19510	SM00316	Ribosomal protein S1-like RNA-binding domain
CAB88_RS19510	SM00322	K homology RNA-binding domain
CAB88_RS19520	SM00479	CAB88_RS19520
CAB88_RS19520	SM00481	DNA polymerase alpha chain like domain
CAB88_RS19530	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CAB88_RS19575	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS19575	SM01086	C-terminal, D2-small domain, of ClpB protein
CAB88_RS19595	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CAB88_RS19595	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CAB88_RS19595	SM00493	CAB88_RS19595
CAB88_RS19605	SM00881	CoA binding domain
CAB88_RS19655	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS19655	SM00962	SRP54-type protein, GTPase domain
CAB88_RS19655	SM00963	SRP54-type protein, helical bundle domain
CAB88_RS19665	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS19665	SM00962	SRP54-type protein, GTPase domain
CAB88_RS19665	SM00963	SRP54-type protein, helical bundle domain
CAB88_RS19670	SM00968	SMC proteins Flexible Hinge Domain
CAB88_RS19675	SM00358	Double-stranded RNA binding motif
CAB88_RS19675	SM00535	Ribonuclease III family
CAB88_RS19685	SM00822	CAB88_RS19685
CAB88_RS19690	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CAB88_RS19705	SM00487	DEAD-like helicases superfamily
CAB88_RS19705	SM00490	helicase superfamily c-terminal domain
CAB88_RS19710	SM01120	CAB88_RS19710
CAB88_RS19710	SM01121	CAB88_RS19710
CAB88_RS19730	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
CAB88_RS19745	SM00220	Serine/Threonine protein kinases, catalytic domain
CAB88_RS19745	SM00740	CAB88_RS19745
CAB88_RS19750	SM00331	Sigma factor PP2C-like phosphatases
CAB88_RS19750	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CAB88_RS19775	SM00487	DEAD-like helicases superfamily
CAB88_RS19775	SM00490	helicase superfamily c-terminal domain
CAB88_RS19785	SM01409	CAB88_RS19785
CAB88_RS19790	SM00072	Guanylate kinase homologues.
CAB88_RS19805	SM00831	Cation transporter/ATPase, N-terminus
CAB88_RS19860	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CAB88_RS19875	SM00851	MGS-like domain
CAB88_RS19875	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CAB88_RS19875	SM01209	CAB88_RS19875
CAB88_RS19880	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CAB88_RS19905	SM00363	S4 RNA-binding domain
CAB88_RS19930	SM00363	S4 RNA-binding domain
CAB88_RS19975	SM00864	Tubulin/FtsZ family, GTPase domain
CAB88_RS19975	SM00865	Tubulin/FtsZ family, C-terminal domain
CAB88_RS19980	SM00842	Cell division protein FtsA
CAB88_RS20020	SM00740	CAB88_RS20020
CAB88_RS20025	SM00740	CAB88_RS20025
CAB88_RS20055	SM00717	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
CAB88_RS20075	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CAB88_RS20115	SM00855	Phosphoglycerate mutase family
CAB88_RS20160	SM00507	HNH nucleases
CAB88_RS20205	SM00878	Biotin carboxylase C-terminal domain
CAB88_RS20230	SM00670	Large family of predicted nucleotide-binding domains
CAB88_RS20255	SM00838	Elongation factor G C-terminus
CAB88_RS20335	SM00861	Transketolase, pyrimidine binding domain
CAB88_RS20370	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS20435	SM00052	Putative diguanylate phosphodiesterase
CAB88_RS20525	SM00387	Histidine kinase-like ATPases
CAB88_RS20525	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS20560	SM00642	Alpha-amylase domain
CAB88_RS20565	SM00642	Alpha-amylase domain
CAB88_RS20570	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS20605	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS20690	SM01007	Class II Aldolase and Adducin N-terminal domain
CAB88_RS20720	SM00267	diguanylate cyclase
CAB88_RS20755	SM01061	CAT RNA binding domain
CAB88_RS20765	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS20765	SM00866	CAB88_RS20765
CAB88_RS20780	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS20880	SM00387	Histidine kinase-like ATPases
CAB88_RS20890	SM00936	Penicillin-binding protein 5, C-terminal domain 
CAB88_RS20900	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS20905	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS20925	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS20945	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CAB88_RS21040	SM00354	helix_turn _helix lactose operon repressor
CAB88_RS21060	SM00704	CDGSH-type zinc finger. Function unknown.
CAB88_RS21090	SM00729	Elongator protein 3, MiaB family, Radical SAM
CAB88_RS21090	SM00876	Biotin and Thiamin Synthesis associated domain
CAB88_RS21145	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS21160	SM00860	SMI1 / KNR4 family
CAB88_RS21180	SM00248	ankyrin repeats
CAB88_RS21210	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CAB88_RS21225	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS21250	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS21265	SM00831	Cation transporter/ATPase, N-terminus
CAB88_RS21315	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS21325	SM00062	Bacterial periplasmic substrate-binding proteins
CAB88_RS21325	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CAB88_RS21365	SM00861	Transketolase, pyrimidine binding domain
CAB88_RS21385	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CAB88_RS21400	SM00091	PAS domain
CAB88_RS21400	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS21425	SM00448	cheY-homologous receiver domain
CAB88_RS21435	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CAB88_RS21450	SM00363	S4 RNA-binding domain
CAB88_RS21455	SM00861	Transketolase, pyrimidine binding domain
CAB88_RS21490	SM00878	Biotin carboxylase C-terminal domain
CAB88_RS21540	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS21560	SM00841	Elongation factor P, C-terminal
CAB88_RS21560	SM01185	CAB88_RS21560
CAB88_RS21595	SM00529	Helix-turn-helix diphteria tox regulatory element
CAB88_RS21625	SM00450	Rhodanese Homology Domain
CAB88_RS21635	SM00354	helix_turn _helix lactose operon repressor
CAB88_RS21685	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS21690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS21725	SM00487	DEAD-like helicases superfamily
CAB88_RS21725	SM00490	helicase superfamily c-terminal domain
CAB88_RS21765	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CAB88_RS21800	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS21865	SM01018	B12 binding domain
CAB88_RS21890	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS21900	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS21940	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS22005	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS22020	SM00518	AP endonuclease family 2
CAB88_RS22025	SM00487	DEAD-like helicases superfamily
CAB88_RS22025	SM00490	helicase superfamily c-terminal domain
CAB88_RS22060	SM00400	zinc finger
CAB88_RS22060	SM00493	CAB88_RS22060
CAB88_RS22060	SM00766	DNA primase DnaG DnaB-binding
CAB88_RS22080	SM00116	Domain in cystathionine beta-synthase and other proteins.
CAB88_RS22115	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CAB88_RS22155	SM00729	Elongator protein 3, MiaB family, Radical SAM
CAB88_RS22170	SM00271	DnaJ molecular chaperone homology domain
CAB88_RS22190	SM00729	Elongator protein 3, MiaB family, Radical SAM
CAB88_RS22200	SM00838	Elongation factor G C-terminus
CAB88_RS22230	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS22240	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CAB88_RS22260	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CAB88_RS22270	SM01103	CAB88_RS22270
CAB88_RS22325	SM00954	Region found in RelA / SpoT proteins
CAB88_RS22335	SM00098	Alkaline phosphatase homologues
CAB88_RS22360	SM00855	Phosphoglycerate mutase family
CAB88_RS22405	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS22435	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS22535	SM00732	Likely ribonuclease with RNase H fold.
CAB88_RS22545	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CAB88_RS22580	SM00028	Tetratricopeptide repeats
CAB88_RS22600	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS22645	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CAB88_RS22645	SM00954	Region found in RelA / SpoT proteins
CAB88_RS22690	SM01323	CAB88_RS22690
CAB88_RS22710	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS22715	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CAB88_RS22740	SM00257	Lysin motif
CAB88_RS22790	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS22795	SM00387	Histidine kinase-like ATPases
CAB88_RS22800	SM00448	cheY-homologous receiver domain
CAB88_RS22800	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS22810	SM01317	CAB88_RS22810
CAB88_RS22905	SM00257	Lysin motif
CAB88_RS22915	SM01004	Delta-aminolevulinic acid dehydratase
CAB88_RS22940	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS22955	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS22955	SM00464	Found in ATP-dependent protease La (LON)
CAB88_RS22960	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS22965	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS22965	SM00994	ClpX C4-type zinc finger
CAB88_RS22965	SM01086	C-terminal, D2-small domain, of ClpB protein
CAB88_RS23030	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS23050	SM00857	Resolvase, N terminal domain
CAB88_RS23120	SM00909	Sporulation and spore germination
CAB88_RS23150	SM00421	helix_turn_helix, Lux Regulon
CAB88_RS23170	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS23195	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS23250	SM00465	GIY-YIG type nucleases (URI domain)
CAB88_RS23260	SM00893	Electron transfer flavoprotein domain
CAB88_RS23265	SM00893	Electron transfer flavoprotein domain
CAB88_RS23340	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS23345	SM00387	Histidine kinase-like ATPases
CAB88_RS23345	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS23350	SM00448	cheY-homologous receiver domain
CAB88_RS23350	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS23365	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CAB88_RS23380	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS23395	SM00725	NEAr Transporter domain
CAB88_RS23400	SM00725	NEAr Transporter domain
CAB88_RS23405	SM00725	NEAr Transporter domain
CAB88_RS23415	SM00363	S4 RNA-binding domain
CAB88_RS23425	SM00463	Small MutS-related domain
CAB88_RS23425	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CAB88_RS23425	SM00534	ATPase domain of DNA mismatch repair MUTS family
CAB88_RS23430	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CAB88_RS23430	SM00481	DNA polymerase alpha chain like domain
CAB88_RS23430	SM00483	DNA polymerase X family
CAB88_RS23470	SM00873	B3/4 domain
CAB88_RS23470	SM00874	tRNA synthetase B5 domain
CAB88_RS23470	SM00896	Ferredoxin-fold anticodon binding domain
CAB88_RS23480	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CAB88_RS23550	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CAB88_RS23565	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS23590	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CAB88_RS23605	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CAB88_RS23605	SM01232	CAB88_RS23605
CAB88_RS23610	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CAB88_RS23610	SM00474	3'-5' exonuclease
CAB88_RS23610	SM00475	5'-3' exonuclease
CAB88_RS23610	SM00482	DNA polymerase A domain
CAB88_RS23615	SM00091	PAS domain
CAB88_RS23615	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS23615	SM00387	Histidine kinase-like ATPases
CAB88_RS23615	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS23620	SM00448	cheY-homologous receiver domain
CAB88_RS23620	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS23645	SM01329	CAB88_RS23645
CAB88_RS23695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS23700	SM00919	Malic enzyme, NAD binding domain
CAB88_RS23700	SM01274	CAB88_RS23700
CAB88_RS23705	SM00481	DNA polymerase alpha chain like domain
CAB88_RS23735	SM00116	Domain in cystathionine beta-synthase and other proteins.
CAB88_RS23745	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS23805	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CAB88_RS23805	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CAB88_RS23930	SM00981	CAB88_RS23930
CAB88_RS23975	SM00363	S4 RNA-binding domain
CAB88_RS23975	SM01390	CAB88_RS23975
CAB88_RS23990	SM00363	S4 RNA-binding domain
CAB88_RS24010	SM01266	CAB88_RS24010
CAB88_RS24025	SM00116	Domain in cystathionine beta-synthase and other proteins.
CAB88_RS24045	SM00448	cheY-homologous receiver domain
CAB88_RS24045	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS24050	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS24050	SM00387	Histidine kinase-like ATPases
CAB88_RS24050	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS24055	SM00248	ankyrin repeats
CAB88_RS24085	SM00354	helix_turn _helix lactose operon repressor
CAB88_RS24145	SM00422	helix_turn_helix, mercury resistance
CAB88_RS24160	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS24160	SM00843	CAB88_RS24160
CAB88_RS24165	SM00646	CAB88_RS24165
CAB88_RS24205	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS24225	SM00642	Alpha-amylase domain
CAB88_RS24240	SM00420	helix_turn_helix, Deoxyribose operon repressor
CAB88_RS24245	SM00363	S4 RNA-binding domain
CAB88_RS24270	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS24300	SM01058	CarD-like/TRCF domain
CAB88_RS24335	SM00852	Probable molybdopterin binding domain
CAB88_RS24350	SM00729	Elongator protein 3, MiaB family, Radical SAM
CAB88_RS24370	SM00450	Rhodanese Homology Domain
CAB88_RS24450	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS24480	SM00729	Elongator protein 3, MiaB family, Radical SAM
CAB88_RS24490	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS24535	SM00014	Acid phosphatase homologues
CAB88_RS24550	SM00852	Probable molybdopterin binding domain
CAB88_RS24635	SM00387	Histidine kinase-like ATPases
CAB88_RS24640	SM00387	Histidine kinase-like ATPases
CAB88_RS24640	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS24645	SM01060	CAB88_RS24645
CAB88_RS24685	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS24760	SM00422	helix_turn_helix, mercury resistance
CAB88_RS24770	SM01234	CAB88_RS24770
CAB88_RS24775	SM00947	Carbonic anhydrase
CAB88_RS24840	SM00899	CAB88_RS24840
CAB88_RS24850	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS24850	SM00387	Histidine kinase-like ATPases
CAB88_RS24850	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS24855	SM00448	cheY-homologous receiver domain
CAB88_RS24855	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS24885	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CAB88_RS24900	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS24935	SM00342	helix_turn_helix, arabinose operon control protein
CAB88_RS24935	SM00871	Bacterial transcription activator, effector binding domain
CAB88_RS24950	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS24955	SM00448	cheY-homologous receiver domain
CAB88_RS24955	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS24960	SM00387	Histidine kinase-like ATPases
CAB88_RS24975	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS25005	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS25005	SM00866	CAB88_RS25005
CAB88_RS25035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS25035	SM00387	Histidine kinase-like ATPases
CAB88_RS25035	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS25040	SM00448	cheY-homologous receiver domain
CAB88_RS25040	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS25050	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAB88_RS25090	SM00357	Cold shock protein domain
CAB88_RS25105	SM00422	helix_turn_helix, mercury resistance
CAB88_RS25140	SM00642	Alpha-amylase domain
CAB88_RS25325	SM00316	Ribosomal protein S1-like RNA-binding domain
CAB88_RS25335	SM00344	helix_turn_helix ASNC type
CAB88_RS25370	SM01298	CAB88_RS25370
CAB88_RS25375	SM00479	CAB88_RS25375
CAB88_RS25490	SM00871	Bacterial transcription activator, effector binding domain
CAB88_RS25535	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS25555	SM00287	Bacterial SH3 domain homologues
CAB88_RS25555	SM00644	CAB88_RS25555
CAB88_RS25660	SM00507	HNH nucleases
CAB88_RS25735	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS25750	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS25830	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS25975	SM00422	helix_turn_helix, mercury resistance
CAB88_RS25990	SM00855	Phosphoglycerate mutase family
CAB88_RS26000	SM00729	Elongator protein 3, MiaB family, Radical SAM
CAB88_RS26045	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS26065	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS26065	SM00930	CAB88_RS26065
CAB88_RS26080	SM00493	CAB88_RS26080
CAB88_RS26155	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS26200	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAB88_RS26200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS26280	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS26300	SM00448	cheY-homologous receiver domain
CAB88_RS26300	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS26305	SM00387	Histidine kinase-like ATPases
CAB88_RS26305	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS26330	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAB88_RS26330	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS26335	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAB88_RS26335	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS26355	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS26460	SM01276	CAB88_RS26460
CAB88_RS26510	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
CAB88_RS26515	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAB88_RS26575	SM00344	helix_turn_helix ASNC type
CAB88_RS26585	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS26600	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS26620	SM00448	cheY-homologous receiver domain
CAB88_RS26620	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS26640	SM00316	Ribosomal protein S1-like RNA-binding domain
CAB88_RS26640	SM00357	Cold shock protein domain
CAB88_RS26640	SM00955	CAB88_RS26640
CAB88_RS26670	SM01192	CAB88_RS26670
CAB88_RS26670	SM01193	CAB88_RS26670
CAB88_RS26690	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CAB88_RS26715	SM00387	Histidine kinase-like ATPases
CAB88_RS26720	SM00421	helix_turn_helix, Lux Regulon
CAB88_RS26720	SM00448	cheY-homologous receiver domain
CAB88_RS26805	SM00028	Tetratricopeptide repeats
CAB88_RS26845	SM00487	DEAD-like helicases superfamily
CAB88_RS26845	SM00490	helicase superfamily c-terminal domain
CAB88_RS26860	SM00422	helix_turn_helix, mercury resistance
CAB88_RS26870	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS26885	SM00422	helix_turn_helix, mercury resistance
CAB88_RS26905	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS26920	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CAB88_RS26920	SM00245	tail specific protease
CAB88_RS26930	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS26945	SM00937	CAB88_RS26945
CAB88_RS26955	SM00957	SecA DEAD-like domain
CAB88_RS26955	SM00958	SecA preprotein cross-linking domain
CAB88_RS26965	SM00357	Cold shock protein domain
CAB88_RS26975	SM00487	DEAD-like helicases superfamily
CAB88_RS26975	SM00490	helicase superfamily c-terminal domain
CAB88_RS27015	SM00984	UDP binding domain
CAB88_RS27030	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS27035	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
CAB88_RS27210	SM00287	Bacterial SH3 domain homologues
CAB88_RS27245	SM00287	Bacterial SH3 domain homologues
CAB88_RS27275	SM00487	DEAD-like helicases superfamily
CAB88_RS27275	SM00490	helicase superfamily c-terminal domain
CAB88_RS27330	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS27340	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS27365	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS27365	SM00387	Histidine kinase-like ATPases
CAB88_RS27365	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS27370	SM00448	cheY-homologous receiver domain
CAB88_RS27370	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS27450	SM00984	UDP binding domain
CAB88_RS27520	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS27525	SM00850	LytTr DNA-binding domain
CAB88_RS27605	SM00052	Putative diguanylate phosphodiesterase
CAB88_RS27605	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CAB88_RS27605	SM00091	PAS domain
CAB88_RS27605	SM00267	diguanylate cyclase
CAB88_RS27625	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS27700	SM00226	Low molecular weight phosphatase family
CAB88_RS27720	SM00903	Flavin reductase like domain
CAB88_RS27760	SM00937	CAB88_RS27760
CAB88_RS27780	SM00357	Cold shock protein domain
CAB88_RS27780	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS27780	SM00959	Rho termination factor, N-terminal domain
CAB88_RS27805	SM00448	cheY-homologous receiver domain
CAB88_RS27855	SM00155	Phospholipase D. Active site motifs.
CAB88_RS27865	SM00052	Putative diguanylate phosphodiesterase
CAB88_RS27865	SM00267	diguanylate cyclase
CAB88_RS27875	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS27885	SM00421	helix_turn_helix, Lux Regulon
CAB88_RS27885	SM00448	cheY-homologous receiver domain
CAB88_RS27900	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS27945	SM00836	DALR anticodon binding domain
CAB88_RS27945	SM01016	Arginyl tRNA synthetase N terminal dom
CAB88_RS27990	SM00422	helix_turn_helix, mercury resistance
CAB88_RS28020	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CAB88_RS28030	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS28070	SM00936	Penicillin-binding protein 5, C-terminal domain 
CAB88_RS28115	SM00986	Uracil DNA glycosylase superfamily
CAB88_RS28115	SM00987	UreE urease accessory protein, C-terminal domain 
CAB88_RS28125	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS28135	SM00354	helix_turn _helix lactose operon repressor
CAB88_RS28170	SM00100	Cyclic nucleotide-monophosphate binding domain
CAB88_RS28180	SM00421	helix_turn_helix, Lux Regulon
CAB88_RS28180	SM00448	cheY-homologous receiver domain
CAB88_RS28185	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CAB88_RS28195	SM00267	diguanylate cyclase
CAB88_RS28210	SM00448	cheY-homologous receiver domain
CAB88_RS28210	SM00850	LytTr DNA-binding domain
CAB88_RS28245	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAB88_RS28300	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS28335	SM00448	cheY-homologous receiver domain
CAB88_RS28335	SM00850	LytTr DNA-binding domain
CAB88_RS28340	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CAB88_RS28340	SM00387	Histidine kinase-like ATPases
CAB88_RS28400	SM00487	DEAD-like helicases superfamily
CAB88_RS28400	SM00490	helicase superfamily c-terminal domain
CAB88_RS28405	SM01240	CAB88_RS28405
CAB88_RS28420	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CAB88_RS28420	SM00387	Histidine kinase-like ATPases
CAB88_RS28420	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS28435	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CAB88_RS28440	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS28455	SM00091	PAS domain
CAB88_RS28455	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS28455	SM00387	Histidine kinase-like ATPases
CAB88_RS28455	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS28460	SM00448	cheY-homologous receiver domain
CAB88_RS28460	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS28485	SM00788	Adenylosuccinate synthetase
CAB88_RS28500	SM00267	diguanylate cyclase
CAB88_RS28545	SM00470	ParB-like nuclease domain
CAB88_RS28555	SM00470	ParB-like nuclease domain
CAB88_RS28565	SM01228	CAB88_RS28565
CAB88_RS28575	SM00393	Putative single-stranded nucleic acids-binding domain
CAB88_RS28575	SM01245	CAB88_RS28575
CAB88_RS28595	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS28595	SM00760	Bacterial dnaA protein helix-turn-helix domain
CAB88_RS28600	SM00480	DNA polymerase III beta subunit
CAB88_RS28615	SM00387	Histidine kinase-like ATPases
CAB88_RS28615	SM00433	TopoisomeraseII
CAB88_RS28620	SM00434	DNA Topoisomerase IV
CAB88_RS28655	SM00116	Domain in cystathionine beta-synthase and other proteins.
CAB88_RS28655	SM01240	CAB88_RS28655
CAB88_RS28660	SM00936	Penicillin-binding protein 5, C-terminal domain 
CAB88_RS28720	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS28730	SM00493	CAB88_RS28730
CAB88_RS28810	SM00465	GIY-YIG type nucleases (URI domain)
CAB88_RS28820	SM00966	SpoVT / AbrB like domain 
CAB88_RS28835	SM00493	CAB88_RS28835
CAB88_RS28840	SM00650	Ribosomal RNA adenine dimethylases
CAB88_RS28885	SM01400	CAB88_RS28885
CAB88_RS28900	SM00487	DEAD-like helicases superfamily
CAB88_RS28900	SM00490	helicase superfamily c-terminal domain
CAB88_RS28900	SM00982	CAB88_RS28900
CAB88_RS28900	SM01058	CarD-like/TRCF domain
CAB88_RS28905	SM00966	SpoVT / AbrB like domain 
CAB88_RS28920	SM00363	S4 RNA-binding domain
CAB88_RS28940	SM00316	Ribosomal protein S1-like RNA-binding domain
CAB88_RS28955	SM00331	Sigma factor PP2C-like phosphatases
CAB88_RS28955	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CAB88_RS28960	SM00977	TilS substrate C-terminal domain
CAB88_RS28970	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS29010	SM00905	Dihydroneopterin aldolase
CAB88_RS29020	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS29150	SM00507	HNH nucleases
CAB88_RS29200	SM00843	CAB88_RS29200
CAB88_RS29250	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS29360	SM00974	CAB88_RS29360
CAB88_RS29440	SM00894	Excalibur calcium-binding domain
CAB88_RS29500	SM00507	HNH nucleases
CAB88_RS29520	SM00507	HNH nucleases
CAB88_RS29535	SM00507	HNH nucleases
CAB88_RS29545	SM00507	HNH nucleases
CAB88_RS29655	SM01130	CAB88_RS29655
CAB88_RS29665	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS29675	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAB88_RS29755	SM00422	helix_turn_helix, mercury resistance
CAB88_RS29795	SM00344	helix_turn_helix ASNC type
CAB88_RS29850	SM00966	SpoVT / AbrB like domain 
CAB88_RS29905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS29905	SM00895	CAB88_RS29905
CAB88_RS29915	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS29930	SM00823	Phosphopantetheine attachment site
CAB88_RS29940	SM00823	Phosphopantetheine attachment site
CAB88_RS29990	SM00411	bacterial (prokaryotic) histone like domain
CAB88_RS30045	SM00984	UDP binding domain
CAB88_RS30065	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS30140	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS30170	SM01321	CAB88_RS30170
CAB88_RS30210	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS30250	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS30255	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAB88_RS30255	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS30280	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CAB88_RS30285	SM00357	Cold shock protein domain
CAB88_RS30300	SM01058	CarD-like/TRCF domain
CAB88_RS30330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAB88_RS30330	SM00895	CAB88_RS30330
CAB88_RS30355	SM00116	Domain in cystathionine beta-synthase and other proteins.
CAB88_RS30355	SM00924	MgtE intracellular N domain
CAB88_RS30455	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS30455	SM00387	Histidine kinase-like ATPases
CAB88_RS30455	SM00388	His Kinase A (phosphoacceptor) domain
CAB88_RS30460	SM00448	cheY-homologous receiver domain
CAB88_RS30460	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS30535	SM00632	CAB88_RS30535
CAB88_RS30535	SM00642	Alpha-amylase domain
CAB88_RS30555	SM00387	Histidine kinase-like ATPases
CAB88_RS30560	SM00448	cheY-homologous receiver domain
CAB88_RS30560	SM00862	Transcriptional regulatory protein, C terminal
CAB88_RS30570	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS30590	SM00450	Rhodanese Homology Domain
CAB88_RS30590	SM00849	Metallo-beta-lactamase superfamily
CAB88_RS30640	SM00858	CAB88_RS30640
CAB88_RS30695	SM00028	Tetratricopeptide repeats
CAB88_RS30705	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAB88_RS30705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS30705	SM00319	Homologues of the ligand binding domain of Tar
CAB88_RS30725	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS30760	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS30810	SM00758	CAB88_RS30810
CAB88_RS30835	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS30880	SM00448	cheY-homologous receiver domain
CAB88_RS30885	SM00387	Histidine kinase-like ATPases
CAB88_RS30905	SM00758	CAB88_RS30905
CAB88_RS30910	SM00028	Tetratricopeptide repeats
CAB88_RS30915	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS30985	SM01321	CAB88_RS30985
CAB88_RS30995	SM00855	Phosphoglycerate mutase family
CAB88_RS31080	SM00052	Putative diguanylate phosphodiesterase
CAB88_RS31080	SM00091	PAS domain
CAB88_RS31080	SM00267	diguanylate cyclase
CAB88_RS31110	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS31115	SM00028	Tetratricopeptide repeats
CAB88_RS31140	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS31145	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS31150	SM01260	CAB88_RS31150
CAB88_RS31165	SM00470	ParB-like nuclease domain
CAB88_RS31215	SM00354	helix_turn _helix lactose operon repressor
CAB88_RS31245	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS31255	SM00822	CAB88_RS31255
CAB88_RS31255	SM00823	Phosphopantetheine attachment site
CAB88_RS31255	SM00825	Beta-ketoacyl synthase
CAB88_RS31255	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CAB88_RS31280	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CAB88_RS31310	SM00822	CAB88_RS31310
CAB88_RS31310	SM00823	Phosphopantetheine attachment site
CAB88_RS31310	SM00825	Beta-ketoacyl synthase
CAB88_RS31310	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CAB88_RS31375	SM00644	CAB88_RS31375
CAB88_RS31390	SM00644	CAB88_RS31390
CAB88_RS31420	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS31515	SM01276	CAB88_RS31515
CAB88_RS31530	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAB88_RS31530	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAB88_RS31555	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS31565	SM01260	CAB88_RS31565
CAB88_RS31655	SM00507	HNH nucleases
CAB88_RS31670	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CAB88_RS31670	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CAB88_RS31670	SM00493	CAB88_RS31670
CAB88_RS31690	SM00858	CAB88_RS31690
CAB88_RS31765	SM00155	Phospholipase D. Active site motifs.
CAB88_RS31770	SM00028	Tetratricopeptide repeats
CAB88_RS31855	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS31925	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS31960	SM00857	Resolvase, N terminal domain
CAB88_RS32030	SM00411	bacterial (prokaryotic) histone like domain
CAB88_RS32045	SM01321	CAB88_RS32045
CAB88_RS32120	SM00823	Phosphopantetheine attachment site
CAB88_RS32125	SM00984	UDP binding domain
CAB88_RS32145	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS32170	SM00966	SpoVT / AbrB like domain 
CAB88_RS32395	SM00530	Helix-turn-helix XRE-family like proteins 
CAB88_RS32470	SM00028	Tetratricopeptide repeats
CAB88_RS32495	SM00287	Bacterial SH3 domain homologues
CAB88_RS32495	SM00644	CAB88_RS32495
CAB88_RS32955	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CAB88_RS32955	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CAB88_RS32955	SM00493	CAB88_RS32955
CAB88_RS32970	SM00028	Tetratricopeptide repeats
CAB88_RS33040	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS33065	SM00644	CAB88_RS33065
CAB88_RS33105	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAB88_RS33125	SM00421	helix_turn_helix, Lux Regulon
CAB88_RS33145	SM00966	SpoVT / AbrB like domain 
CAB88_RS33175	SM00382	ATPases associated with a variety of cellular activities
CAB88_RS33230	SM00507	HNH nucleases
CAB88_RS33375	SM00060	Fibronectin type 3 domain
