BF38_RS00510 SM01018 B12 binding domain BF38_RS01000 SM00849 Metallo-beta-lactamase superfamily BF38_RS01030 SM00382 ATPases associated with a variety of cellular activities BF38_RS01350 SM00849 Metallo-beta-lactamase superfamily BF38_RS01490 SM00098 Alkaline phosphatase homologues BF38_RS02915 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BF38_RS02930 SM00482 DNA polymerase A domain BF38_RS02965 SM00091 PAS domain BF38_RS02965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS02975 SM00448 cheY-homologous receiver domain BF38_RS03020 SM00382 ATPases associated with a variety of cellular activities BF38_RS03070 SM01018 B12 binding domain BF38_RS03100 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF38_RS03110 SM00849 Metallo-beta-lactamase superfamily BF38_RS03150 SM00382 ATPases associated with a variety of cellular activities BF38_RS03215 SM00382 ATPases associated with a variety of cellular activities BF38_RS03230 SM00518 AP endonuclease family 2 BF38_RS03235 SM00487 DEAD-like helicases superfamily BF38_RS03235 SM00490 helicase superfamily c-terminal domain BF38_RS03270 SM00400 zinc finger BF38_RS03270 SM00493 BF38_RS03270 BF38_RS03270 SM00766 DNA primase DnaG DnaB-binding BF38_RS03290 SM00116 Domain in cystathionine beta-synthase and other proteins. BF38_RS03325 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF38_RS03360 SM00729 Elongator protein 3, MiaB family, Radical SAM BF38_RS03375 SM00271 DnaJ molecular chaperone homology domain BF38_RS03395 SM00729 Elongator protein 3, MiaB family, Radical SAM BF38_RS03405 SM00838 Elongation factor G C-terminus BF38_RS03435 SM00849 Metallo-beta-lactamase superfamily BF38_RS03445 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BF38_RS03465 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF38_RS03475 SM01103 BF38_RS03475 BF38_RS03530 SM00954 Region found in RelA / SpoT proteins BF38_RS03540 SM00098 Alkaline phosphatase homologues BF38_RS03565 SM00855 Phosphoglycerate mutase family BF38_RS03610 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS03635 SM00382 ATPases associated with a variety of cellular activities BF38_RS03730 SM00732 Likely ribonuclease with RNase H fold. BF38_RS03740 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BF38_RS03775 SM00028 Tetratricopeptide repeats BF38_RS03795 SM00382 ATPases associated with a variety of cellular activities BF38_RS03835 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF38_RS03835 SM00954 Region found in RelA / SpoT proteins BF38_RS03880 SM01323 BF38_RS03880 BF38_RS03900 SM00382 ATPases associated with a variety of cellular activities BF38_RS03905 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BF38_RS03935 SM00257 Lysin motif BF38_RS03985 SM00382 ATPases associated with a variety of cellular activities BF38_RS03990 SM00387 Histidine kinase-like ATPases BF38_RS03995 SM00448 cheY-homologous receiver domain BF38_RS03995 SM00862 Transcriptional regulatory protein, C terminal BF38_RS04005 SM01317 BF38_RS04005 BF38_RS04095 SM00257 Lysin motif BF38_RS04105 SM01004 Delta-aminolevulinic acid dehydratase BF38_RS04130 SM00347 helix_turn_helix multiple antibiotic resistance protein BF38_RS04145 SM00382 ATPases associated with a variety of cellular activities BF38_RS04145 SM00464 Found in ATP-dependent protease La (LON) BF38_RS04150 SM00382 ATPases associated with a variety of cellular activities BF38_RS04155 SM00382 ATPases associated with a variety of cellular activities BF38_RS04155 SM00994 ClpX C4-type zinc finger BF38_RS04155 SM01086 C-terminal, D2-small domain, of ClpB protein BF38_RS04215 SM00909 Sporulation and spore germination BF38_RS04250 SM00421 helix_turn_helix, Lux Regulon BF38_RS04290 SM00382 ATPases associated with a variety of cellular activities BF38_RS04295 SM00382 ATPases associated with a variety of cellular activities BF38_RS04305 SM00342 helix_turn_helix, arabinose operon control protein BF38_RS04305 SM00448 cheY-homologous receiver domain BF38_RS04320 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS04345 SM00382 ATPases associated with a variety of cellular activities BF38_RS04395 SM00465 GIY-YIG type nucleases (URI domain) BF38_RS04405 SM00893 Electron transfer flavoprotein domain BF38_RS04410 SM00893 Electron transfer flavoprotein domain BF38_RS04470 SM00382 ATPases associated with a variety of cellular activities BF38_RS04475 SM00387 Histidine kinase-like ATPases BF38_RS04475 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS04480 SM00448 cheY-homologous receiver domain BF38_RS04480 SM00862 Transcriptional regulatory protein, C terminal BF38_RS04495 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BF38_RS04515 SM00382 ATPases associated with a variety of cellular activities BF38_RS04530 SM00725 NEAr Transporter domain BF38_RS04535 SM00725 NEAr Transporter domain BF38_RS04540 SM00725 NEAr Transporter domain BF38_RS04550 SM00363 S4 RNA-binding domain BF38_RS04560 SM00463 Small MutS-related domain BF38_RS04560 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BF38_RS04560 SM00534 ATPase domain of DNA mismatch repair MUTS family BF38_RS04565 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BF38_RS04565 SM00481 DNA polymerase alpha chain like domain BF38_RS04565 SM00483 DNA polymerase X family BF38_RS04605 SM00873 B3/4 domain BF38_RS04605 SM00874 tRNA synthetase B5 domain BF38_RS04605 SM00896 Ferredoxin-fold anticodon binding domain BF38_RS04615 SM00967 RNA 2'-O ribose methyltransferase substrate binding BF38_RS04690 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BF38_RS04700 SM00382 ATPases associated with a variety of cellular activities BF38_RS04720 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF38_RS04735 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BF38_RS04735 SM01232 BF38_RS04735 BF38_RS04740 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BF38_RS04740 SM00474 3'-5' exonuclease BF38_RS04740 SM00475 5'-3' exonuclease BF38_RS04740 SM00482 DNA polymerase A domain BF38_RS04745 SM00091 PAS domain BF38_RS04745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS04745 SM00387 Histidine kinase-like ATPases BF38_RS04745 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS04750 SM00448 cheY-homologous receiver domain BF38_RS04750 SM00862 Transcriptional regulatory protein, C terminal BF38_RS04770 SM01329 BF38_RS04770 BF38_RS04820 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS04825 SM00919 Malic enzyme, NAD binding domain BF38_RS04825 SM01274 BF38_RS04825 BF38_RS04830 SM00481 DNA polymerase alpha chain like domain BF38_RS04865 SM00116 Domain in cystathionine beta-synthase and other proteins. BF38_RS04875 SM00849 Metallo-beta-lactamase superfamily BF38_RS04945 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS04955 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BF38_RS04955 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BF38_RS05075 SM00981 BF38_RS05075 BF38_RS05115 SM00363 S4 RNA-binding domain BF38_RS05115 SM01390 BF38_RS05115 BF38_RS05130 SM00363 S4 RNA-binding domain BF38_RS05160 SM00116 Domain in cystathionine beta-synthase and other proteins. BF38_RS05180 SM00448 cheY-homologous receiver domain BF38_RS05180 SM00862 Transcriptional regulatory protein, C terminal BF38_RS05185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS05185 SM00387 Histidine kinase-like ATPases BF38_RS05185 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS05190 SM00248 ankyrin repeats BF38_RS05225 SM00354 helix_turn _helix lactose operon repressor BF38_RS05285 SM00422 helix_turn_helix, mercury resistance BF38_RS05300 SM00843 BF38_RS05300 BF38_RS05340 SM00849 Metallo-beta-lactamase superfamily BF38_RS05360 SM00642 Alpha-amylase domain BF38_RS05380 SM00420 helix_turn_helix, Deoxyribose operon repressor BF38_RS05385 SM00363 S4 RNA-binding domain BF38_RS05405 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF38_RS05435 SM01058 CarD-like/TRCF domain BF38_RS05470 SM00852 Probable molybdopterin binding domain BF38_RS05485 SM00729 Elongator protein 3, MiaB family, Radical SAM BF38_RS05505 SM00450 Rhodanese Homology Domain BF38_RS05585 SM00382 ATPases associated with a variety of cellular activities BF38_RS05605 SM00729 Elongator protein 3, MiaB family, Radical SAM BF38_RS05615 SM00382 ATPases associated with a variety of cellular activities BF38_RS05655 SM00014 Acid phosphatase homologues BF38_RS05670 SM00852 Probable molybdopterin binding domain BF38_RS05730 SM00387 Histidine kinase-like ATPases BF38_RS05735 SM00387 Histidine kinase-like ATPases BF38_RS05735 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS05765 SM00382 ATPases associated with a variety of cellular activities BF38_RS05825 SM01234 BF38_RS05825 BF38_RS05830 SM00947 Carbonic anhydrase BF38_RS05850 SM00894 Excalibur calcium-binding domain BF38_RS05905 SM00899 BF38_RS05905 BF38_RS05915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS05915 SM00387 Histidine kinase-like ATPases BF38_RS05915 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS05920 SM00448 cheY-homologous receiver domain BF38_RS05920 SM00862 Transcriptional regulatory protein, C terminal BF38_RS05950 SM00046 Diacylglycerol kinase catalytic domain (presumed) BF38_RS05990 SM00382 ATPases associated with a variety of cellular activities BF38_RS05995 SM00342 helix_turn_helix, arabinose operon control protein BF38_RS05995 SM00871 Bacterial transcription activator, effector binding domain BF38_RS06000 SM00448 cheY-homologous receiver domain BF38_RS06000 SM00862 Transcriptional regulatory protein, C terminal BF38_RS06005 SM00387 Histidine kinase-like ATPases BF38_RS06020 SM00382 ATPases associated with a variety of cellular activities BF38_RS06045 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS06045 SM00866 BF38_RS06045 BF38_RS06085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS06085 SM00387 Histidine kinase-like ATPases BF38_RS06085 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS06090 SM00448 cheY-homologous receiver domain BF38_RS06090 SM00862 Transcriptional regulatory protein, C terminal BF38_RS06095 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BF38_RS06135 SM00357 Cold shock protein domain BF38_RS06175 SM00642 Alpha-amylase domain BF38_RS06350 SM00316 Ribosomal protein S1-like RNA-binding domain BF38_RS06360 SM00344 helix_turn_helix ASNC type BF38_RS06395 SM01298 BF38_RS06395 BF38_RS06400 SM00479 BF38_RS06400 BF38_RS06495 SM00871 Bacterial transcription activator, effector binding domain BF38_RS06635 SM00420 helix_turn_helix, Deoxyribose operon repressor BF38_RS06675 SM00422 helix_turn_helix, mercury resistance BF38_RS06690 SM00855 Phosphoglycerate mutase family BF38_RS06700 SM00729 Elongator protein 3, MiaB family, Radical SAM BF38_RS06755 SM00382 ATPases associated with a variety of cellular activities BF38_RS06775 SM00382 ATPases associated with a variety of cellular activities BF38_RS06775 SM00930 BF38_RS06775 BF38_RS06795 SM00493 BF38_RS06795 BF38_RS06890 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS06900 SM00849 Metallo-beta-lactamase superfamily BF38_RS06945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF38_RS06945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS07015 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS07040 SM00448 cheY-homologous receiver domain BF38_RS07040 SM00862 Transcriptional regulatory protein, C terminal BF38_RS07045 SM00387 Histidine kinase-like ATPases BF38_RS07045 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS07065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF38_RS07065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS07070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF38_RS07070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS07090 SM00347 helix_turn_helix multiple antibiotic resistance protein BF38_RS07175 SM01276 BF38_RS07175 BF38_RS07180 SM01276 BF38_RS07180 BF38_RS07215 SM00363 S4 RNA-binding domain BF38_RS07235 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BF38_RS07240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF38_RS07290 SM00382 ATPases associated with a variety of cellular activities BF38_RS07310 SM00448 cheY-homologous receiver domain BF38_RS07310 SM00862 Transcriptional regulatory protein, C terminal BF38_RS07325 SM00382 ATPases associated with a variety of cellular activities BF38_RS07345 SM00487 DEAD-like helicases superfamily BF38_RS07365 SM00316 Ribosomal protein S1-like RNA-binding domain BF38_RS07365 SM00357 Cold shock protein domain BF38_RS07365 SM00955 BF38_RS07365 BF38_RS07395 SM01192 BF38_RS07395 BF38_RS07395 SM01193 BF38_RS07395 BF38_RS07415 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF38_RS07515 SM00028 Tetratricopeptide repeats BF38_RS07555 SM00487 DEAD-like helicases superfamily BF38_RS07555 SM00490 helicase superfamily c-terminal domain BF38_RS07570 SM00422 helix_turn_helix, mercury resistance BF38_RS07590 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS07605 SM00422 helix_turn_helix, mercury resistance BF38_RS07615 SM00382 ATPases associated with a variety of cellular activities BF38_RS07625 SM00382 ATPases associated with a variety of cellular activities BF38_RS07635 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF38_RS07635 SM00245 tail specific protease BF38_RS07645 SM00382 ATPases associated with a variety of cellular activities BF38_RS07660 SM00937 BF38_RS07660 BF38_RS07665 SM00957 SecA DEAD-like domain BF38_RS07665 SM00958 SecA preprotein cross-linking domain BF38_RS07675 SM00357 Cold shock protein domain BF38_RS07685 SM00487 DEAD-like helicases superfamily BF38_RS07685 SM00490 helicase superfamily c-terminal domain BF38_RS07725 SM00984 UDP binding domain BF38_RS07740 SM00382 ATPases associated with a variety of cellular activities BF38_RS07745 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BF38_RS07890 SM00287 Bacterial SH3 domain homologues BF38_RS07920 SM00287 Bacterial SH3 domain homologues BF38_RS07950 SM00487 DEAD-like helicases superfamily BF38_RS07950 SM00490 helicase superfamily c-terminal domain BF38_RS08000 SM00382 ATPases associated with a variety of cellular activities BF38_RS08010 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS08035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS08035 SM00387 Histidine kinase-like ATPases BF38_RS08035 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS08040 SM00448 cheY-homologous receiver domain BF38_RS08040 SM00862 Transcriptional regulatory protein, C terminal BF38_RS08065 SM00984 UDP binding domain BF38_RS08150 SM00382 ATPases associated with a variety of cellular activities BF38_RS08155 SM00850 LytTr DNA-binding domain BF38_RS08235 SM00052 Putative diguanylate phosphodiesterase BF38_RS08235 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BF38_RS08235 SM00091 PAS domain BF38_RS08235 SM00267 diguanylate cyclase BF38_RS08255 SM00382 ATPases associated with a variety of cellular activities BF38_RS08325 SM00226 Low molecular weight phosphatase family BF38_RS08340 SM00903 Flavin reductase like domain BF38_RS08375 SM00937 BF38_RS08375 BF38_RS08390 SM00357 Cold shock protein domain BF38_RS08390 SM00382 ATPases associated with a variety of cellular activities BF38_RS08390 SM00959 Rho termination factor, N-terminal domain BF38_RS08410 SM00448 cheY-homologous receiver domain BF38_RS08460 SM00155 Phospholipase D. Active site motifs. BF38_RS08470 SM00052 Putative diguanylate phosphodiesterase BF38_RS08470 SM00267 diguanylate cyclase BF38_RS08480 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS08525 SM00836 DALR anticodon binding domain BF38_RS08525 SM01016 Arginyl tRNA synthetase N terminal dom BF38_RS08570 SM00422 helix_turn_helix, mercury resistance BF38_RS08600 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF38_RS08610 SM00382 ATPases associated with a variety of cellular activities BF38_RS08655 SM00936 Penicillin-binding protein 5, C-terminal domain BF38_RS08700 SM00986 Uracil DNA glycosylase superfamily BF38_RS08700 SM00987 UreE urease accessory protein, C-terminal domain BF38_RS08710 SM00382 ATPases associated with a variety of cellular activities BF38_RS08720 SM00354 helix_turn _helix lactose operon repressor BF38_RS08755 SM00100 Cyclic nucleotide-monophosphate binding domain BF38_RS08765 SM00421 helix_turn_helix, Lux Regulon BF38_RS08765 SM00448 cheY-homologous receiver domain BF38_RS08770 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BF38_RS08780 SM00267 diguanylate cyclase BF38_RS08795 SM00448 cheY-homologous receiver domain BF38_RS08795 SM00850 LytTr DNA-binding domain BF38_RS08825 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF38_RS08850 SM00382 ATPases associated with a variety of cellular activities BF38_RS08905 SM00448 cheY-homologous receiver domain BF38_RS08905 SM00850 LytTr DNA-binding domain BF38_RS08910 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BF38_RS08910 SM00387 Histidine kinase-like ATPases BF38_RS08965 SM00487 DEAD-like helicases superfamily BF38_RS08965 SM00490 helicase superfamily c-terminal domain BF38_RS08975 SM01240 BF38_RS08975 BF38_RS09000 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF38_RS09005 SM00849 Metallo-beta-lactamase superfamily BF38_RS09020 SM00091 PAS domain BF38_RS09020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS09020 SM00387 Histidine kinase-like ATPases BF38_RS09020 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS09025 SM00448 cheY-homologous receiver domain BF38_RS09025 SM00862 Transcriptional regulatory protein, C terminal BF38_RS09050 SM00788 Adenylosuccinate synthetase BF38_RS09065 SM00267 diguanylate cyclase BF38_RS09110 SM00470 ParB-like nuclease domain BF38_RS09120 SM00470 ParB-like nuclease domain BF38_RS09130 SM01228 BF38_RS09130 BF38_RS09140 SM00393 Putative single-stranded nucleic acids-binding domain BF38_RS09140 SM01245 BF38_RS09140 BF38_RS09160 SM00382 ATPases associated with a variety of cellular activities BF38_RS09160 SM00760 Bacterial dnaA protein helix-turn-helix domain BF38_RS09165 SM00480 DNA polymerase III beta subunit BF38_RS09185 SM00434 DNA Topoisomerase IV BF38_RS09210 SM00116 Domain in cystathionine beta-synthase and other proteins. BF38_RS09210 SM01240 BF38_RS09210 BF38_RS09215 SM00936 Penicillin-binding protein 5, C-terminal domain BF38_RS09270 SM00382 ATPases associated with a variety of cellular activities BF38_RS09280 SM00493 BF38_RS09280 BF38_RS09365 SM00966 SpoVT / AbrB like domain BF38_RS09380 SM00493 BF38_RS09380 BF38_RS09385 SM00650 Ribosomal RNA adenine dimethylases BF38_RS09430 SM01400 BF38_RS09430 BF38_RS09445 SM00487 DEAD-like helicases superfamily BF38_RS09445 SM00490 helicase superfamily c-terminal domain BF38_RS09445 SM00982 BF38_RS09445 BF38_RS09445 SM01058 CarD-like/TRCF domain BF38_RS09450 SM00966 SpoVT / AbrB like domain BF38_RS09465 SM00363 S4 RNA-binding domain BF38_RS09485 SM00316 Ribosomal protein S1-like RNA-binding domain BF38_RS09500 SM00331 Sigma factor PP2C-like phosphatases BF38_RS09500 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BF38_RS09505 SM00977 TilS substrate C-terminal domain BF38_RS09515 SM00382 ATPases associated with a variety of cellular activities BF38_RS09555 SM00905 Dihydroneopterin aldolase BF38_RS09565 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS09670 SM00382 ATPases associated with a variety of cellular activities BF38_RS09670 SM01086 C-terminal, D2-small domain, of ClpB protein BF38_RS09675 SM00382 ATPases associated with a variety of cellular activities BF38_RS09685 SM00670 Large family of predicted nucleotide-binding domains BF38_RS09710 SM00840 BF38_RS09710 BF38_RS09715 SM00535 Ribonuclease III family BF38_RS09720 SM00967 RNA 2'-O ribose methyltransferase substrate binding BF38_RS09730 SM00421 helix_turn_helix, Lux Regulon BF38_RS09745 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BF38_RS09750 SM00649 Ribosomal protein L11/L12 BF38_RS09780 SM00663 RNA polymerase I subunit A N-terminus BF38_RS09800 SM00838 Elongation factor G C-terminus BF38_RS09800 SM00889 Elongation factor G, domain IV BF38_RS09810 SM01403 BF38_RS09810 BF38_RS09830 SM01382 BF38_RS09830 BF38_RS09830 SM01383 BF38_RS09830 BF38_RS09845 SM00322 K homology RNA-binding domain BF38_RS09865 SM01374 BF38_RS09865 BF38_RS09870 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BF38_RS09930 SM00316 Ribosomal protein S1-like RNA-binding domain BF38_RS09950 SM00662 RNA polymerases D BF38_RS09960 SM00382 ATPases associated with a variety of cellular activities BF38_RS09965 SM00382 ATPases associated with a variety of cellular activities BF38_RS09995 SM00646 BF38_RS09995 BF38_RS10010 SM01251 BF38_RS10010 BF38_RS10125 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS10125 SM00895 BF38_RS10125 BF38_RS10140 SM01350 BF38_RS10140 BF38_RS10195 SM00382 ATPases associated with a variety of cellular activities BF38_RS10195 SM00930 BF38_RS10195 BF38_RS10205 SM00829 Enoylreductase BF38_RS10255 SM00382 ATPases associated with a variety of cellular activities BF38_RS10260 SM00382 ATPases associated with a variety of cellular activities BF38_RS10275 SM00342 helix_turn_helix, arabinose operon control protein BF38_RS10370 SM00563 Phosphate acyltransferases BF38_RS10380 SM00354 helix_turn _helix lactose operon repressor BF38_RS10435 SM00382 ATPases associated with a variety of cellular activities BF38_RS10440 SM00387 Histidine kinase-like ATPases BF38_RS10445 SM00421 helix_turn_helix, Lux Regulon BF38_RS10445 SM00448 cheY-homologous receiver domain BF38_RS10450 SM00382 ATPases associated with a variety of cellular activities BF38_RS10485 SM00382 ATPases associated with a variety of cellular activities BF38_RS10490 SM00382 ATPases associated with a variety of cellular activities BF38_RS10555 SM00487 DEAD-like helicases superfamily BF38_RS10555 SM00490 helicase superfamily c-terminal domain BF38_RS10580 SM01005 Alanine racemase, C-terminal domain BF38_RS10595 SM00316 Ribosomal protein S1-like RNA-binding domain BF38_RS10595 SM00732 Likely ribonuclease with RNase H fold. BF38_RS10605 SM00731 SprT homologues. BF38_RS10710 SM00382 ATPases associated with a variety of cellular activities BF38_RS10715 SM00881 CoA binding domain BF38_RS10730 SM00883 Chaperonin 10 Kd subunit BF38_RS10750 SM00448 cheY-homologous receiver domain BF38_RS10750 SM00862 Transcriptional regulatory protein, C terminal BF38_RS10755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS10755 SM00387 Histidine kinase-like ATPases BF38_RS10755 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS10860 SM00382 ATPases associated with a variety of cellular activities BF38_RS10865 SM00387 Histidine kinase-like ATPases BF38_RS10865 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS10870 SM00448 cheY-homologous receiver domain BF38_RS10870 SM00862 Transcriptional regulatory protein, C terminal BF38_RS10915 SM01001 AIR carboxylase BF38_RS10925 SM00998 Adenylosuccinate lyase C-terminus BF38_RS10940 SM01211 BF38_RS10940 BF38_RS10965 SM00798 AICARFT/IMPCHase bienzyme BF38_RS10965 SM00851 MGS-like domain BF38_RS10970 SM01209 BF38_RS10970 BF38_RS10970 SM01210 BF38_RS10970 BF38_RS10980 SM00244 prohibitin homologues BF38_RS11005 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BF38_RS11005 SM00292 breast cancer carboxy-terminal domain BF38_RS11005 SM00532 Ligase N family BF38_RS11035 SM00382 ATPases associated with a variety of cellular activities BF38_RS11035 SM00930 BF38_RS11035 BF38_RS11065 SM00347 helix_turn_helix multiple antibiotic resistance protein BF38_RS11085 SM00845 GatB domain BF38_RS11090 SM00046 Diacylglycerol kinase catalytic domain (presumed) BF38_RS11105 SM00382 ATPases associated with a variety of cellular activities BF38_RS11170 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BF38_RS11215 SM01007 Class II Aldolase and Adducin N-terminal domain BF38_RS11325 SM00062 Bacterial periplasmic substrate-binding proteins BF38_RS11325 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BF38_RS11330 SM00382 ATPases associated with a variety of cellular activities BF38_RS11335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF38_RS11335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS11365 SM00100 Cyclic nucleotide-monophosphate binding domain BF38_RS11365 SM00419 helix_turn_helix, cAMP Regulatory protein BF38_RS11375 SM00642 Alpha-amylase domain BF38_RS11395 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BF38_RS11395 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BF38_RS11395 SM00493 BF38_RS11395 BF38_RS11415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF38_RS11415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS11435 SM00382 ATPases associated with a variety of cellular activities BF38_RS11440 SM00382 ATPases associated with a variety of cellular activities BF38_RS11445 SM00060 Fibronectin type 3 domain BF38_RS11445 SM00636 BF38_RS11445 BF38_RS11445 SM00637 BF38_RS11445 BF38_RS11480 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS11505 SM00946 Prolyl-tRNA synthetase, C-terminal BF38_RS11550 SM00831 Cation transporter/ATPase, N-terminus BF38_RS11560 SM00226 Low molecular weight phosphatase family BF38_RS11655 SM00478 endonuclease III BF38_RS11680 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS11735 SM00984 UDP binding domain BF38_RS11815 SM00478 endonuclease III BF38_RS11815 SM00525 BF38_RS11815 BF38_RS11840 SM00382 ATPases associated with a variety of cellular activities BF38_RS11860 SM00382 ATPases associated with a variety of cellular activities BF38_RS12015 SM00567 E-Z type HEAT repeats BF38_RS12030 SM00052 Putative diguanylate phosphodiesterase BF38_RS12030 SM00091 PAS domain BF38_RS12030 SM00267 diguanylate cyclase BF38_RS12040 SM00763 PrkA AAA domain BF38_RS12055 SM00365 Leucine-rich repeat, SDS22-like subfamily BF38_RS12055 SM00369 Leucine-rich repeats, typical (most populated) subfamily BF38_RS12055 SM00725 NEAr Transporter domain BF38_RS12070 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BF38_RS12080 SM00244 prohibitin homologues BF38_RS12085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF38_RS12085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS12090 SM00091 PAS domain BF38_RS12090 SM00387 Histidine kinase-like ATPases BF38_RS12095 SM00448 cheY-homologous receiver domain BF38_RS12115 SM00248 ankyrin repeats BF38_RS12125 SM00382 ATPases associated with a variety of cellular activities BF38_RS12150 SM00448 cheY-homologous receiver domain BF38_RS12150 SM00862 Transcriptional regulatory protein, C terminal BF38_RS12155 SM00387 Histidine kinase-like ATPases BF38_RS12155 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS12170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF38_RS12170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS12175 SM00387 Histidine kinase-like ATPases BF38_RS12180 SM00448 cheY-homologous receiver domain BF38_RS12190 SM00919 Malic enzyme, NAD binding domain BF38_RS12190 SM01274 BF38_RS12190 BF38_RS12205 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS12215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS12215 SM00387 Histidine kinase-like ATPases BF38_RS12215 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS12220 SM00448 cheY-homologous receiver domain BF38_RS12220 SM00862 Transcriptional regulatory protein, C terminal BF38_RS12240 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BF38_RS12240 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BF38_RS12255 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BF38_RS12255 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BF38_RS12265 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF38_RS12280 SM00028 Tetratricopeptide repeats BF38_RS12280 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS12325 SM01091 Transporter associated domain BF38_RS12340 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF38_RS12370 SM00382 ATPases associated with a variety of cellular activities BF38_RS12400 SM00327 von Willebrand factor (vWF) type A domain BF38_RS12405 SM00382 ATPases associated with a variety of cellular activities BF38_RS12410 SM00155 Phospholipase D. Active site motifs. BF38_RS12425 SM00052 Putative diguanylate phosphodiesterase BF38_RS12425 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BF38_RS12425 SM00091 PAS domain BF38_RS12425 SM00267 diguanylate cyclase BF38_RS12435 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS12435 SM00866 BF38_RS12435 BF38_RS12445 SM00642 Alpha-amylase domain BF38_RS12480 SM00382 ATPases associated with a variety of cellular activities BF38_RS12485 SM00062 Bacterial periplasmic substrate-binding proteins BF38_RS12485 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BF38_RS12535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS12535 SM00387 Histidine kinase-like ATPases BF38_RS12535 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS12540 SM00448 cheY-homologous receiver domain BF38_RS12540 SM00862 Transcriptional regulatory protein, C terminal BF38_RS12580 SM00382 ATPases associated with a variety of cellular activities BF38_RS12585 SM00382 ATPases associated with a variety of cellular activities BF38_RS12595 SM00347 helix_turn_helix multiple antibiotic resistance protein BF38_RS12605 SM00354 helix_turn _helix lactose operon repressor BF38_RS12620 SM00382 ATPases associated with a variety of cellular activities BF38_RS12650 SM00829 Enoylreductase BF38_RS12660 SM00770 Zinc dependent phospholipase C (alpha toxin) BF38_RS12695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF38_RS12705 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS12750 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS12850 SM00899 BF38_RS12850 BF38_RS12995 SM00116 Domain in cystathionine beta-synthase and other proteins. BF38_RS13015 SM00287 Bacterial SH3 domain homologues BF38_RS13025 SM00382 ATPases associated with a variety of cellular activities BF38_RS13115 SM00347 helix_turn_helix multiple antibiotic resistance protein BF38_RS13220 SM00450 Rhodanese Homology Domain BF38_RS13230 SM00450 Rhodanese Homology Domain BF38_RS13235 SM00450 Rhodanese Homology Domain BF38_RS13235 SM00849 Metallo-beta-lactamase superfamily BF38_RS13245 SM00450 Rhodanese Homology Domain BF38_RS13250 SM00450 Rhodanese Homology Domain BF38_RS13325 SM00287 Bacterial SH3 domain homologues BF38_RS13335 SM00382 ATPases associated with a variety of cellular activities BF38_RS13390 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BF38_RS13490 SM00344 helix_turn_helix ASNC type BF38_RS13560 SM01060 BF38_RS13560 BF38_RS13595 SM00382 ATPases associated with a variety of cellular activities BF38_RS13600 SM00382 ATPases associated with a variety of cellular activities BF38_RS13605 SM00062 Bacterial periplasmic substrate-binding proteins BF38_RS13605 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BF38_RS13615 SM00382 ATPases associated with a variety of cellular activities BF38_RS13685 SM00644 BF38_RS13685 BF38_RS13690 SM00729 Elongator protein 3, MiaB family, Radical SAM BF38_RS13730 SM00957 SecA DEAD-like domain BF38_RS13730 SM00958 SecA preprotein cross-linking domain BF38_RS13745 SM00635 Bacterial Ig-like domain 2 BF38_RS13805 SM00646 BF38_RS13805 BF38_RS13870 SM00382 ATPases associated with a variety of cellular activities BF38_RS13875 SM00382 ATPases associated with a variety of cellular activities BF38_RS13890 SM00091 PAS domain BF38_RS13890 SM00387 Histidine kinase-like ATPases BF38_RS13895 SM00448 cheY-homologous receiver domain BF38_RS13975 SM00422 helix_turn_helix, mercury resistance BF38_RS14100 SM00347 helix_turn_helix multiple antibiotic resistance protein BF38_RS14155 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF38_RS14175 SM00460 Transglutaminase/protease-like homologues BF38_RS14240 SM00331 Sigma factor PP2C-like phosphatases BF38_RS14240 SM00448 cheY-homologous receiver domain BF38_RS14245 SM00138 Methyltransferase, chemotaxis proteins BF38_RS14250 SM00387 Histidine kinase-like ATPases BF38_RS14250 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS14250 SM00448 cheY-homologous receiver domain BF38_RS14290 SM00829 Enoylreductase BF38_RS14325 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF38_RS14365 SM00028 Tetratricopeptide repeats BF38_RS14390 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS14440 SM00347 helix_turn_helix multiple antibiotic resistance protein BF38_RS14490 SM00347 helix_turn_helix multiple antibiotic resistance protein BF38_RS14505 SM00382 ATPases associated with a variety of cellular activities BF38_RS14615 SM00422 helix_turn_helix, mercury resistance BF38_RS14720 SM00354 helix_turn _helix lactose operon repressor BF38_RS14730 SM00849 Metallo-beta-lactamase superfamily BF38_RS14755 SM00725 NEAr Transporter domain BF38_RS14780 SM00860 SMI1 / KNR4 family BF38_RS14805 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF38_RS14820 SM00342 helix_turn_helix, arabinose operon control protein BF38_RS14820 SM00871 Bacterial transcription activator, effector binding domain BF38_RS14835 SM00387 Histidine kinase-like ATPases BF38_RS14835 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS14840 SM00448 cheY-homologous receiver domain BF38_RS14840 SM00862 Transcriptional regulatory protein, C terminal BF38_RS14870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF38_RS14870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS14910 SM00357 Cold shock protein domain BF38_RS15025 SM01060 BF38_RS15025 BF38_RS15040 SM00642 Alpha-amylase domain BF38_RS15045 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS15055 SM00316 Ribosomal protein S1-like RNA-binding domain BF38_RS15105 SM00382 ATPases associated with a variety of cellular activities BF38_RS15105 SM01086 C-terminal, D2-small domain, of ClpB protein BF38_RS15135 SM00825 Beta-ketoacyl synthase BF38_RS15175 SM00382 ATPases associated with a variety of cellular activities BF38_RS15180 SM00382 ATPases associated with a variety of cellular activities BF38_RS15220 SM00155 Phospholipase D. Active site motifs. BF38_RS15250 SM01118 BF38_RS15250 BF38_RS15260 SM00954 Region found in RelA / SpoT proteins BF38_RS15415 SM00635 Bacterial Ig-like domain 2 BF38_RS15530 SM00861 Transketolase, pyrimidine binding domain BF38_RS15535 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS15630 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS15650 SM00382 ATPases associated with a variety of cellular activities BF38_RS15670 SM00014 Acid phosphatase homologues BF38_RS15720 SM00448 cheY-homologous receiver domain BF38_RS15720 SM00862 Transcriptional regulatory protein, C terminal BF38_RS15725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS15725 SM00387 Histidine kinase-like ATPases BF38_RS15725 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS15730 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS15730 SM00895 BF38_RS15730 BF38_RS15800 SM00822 BF38_RS15800 BF38_RS15835 SM00382 ATPases associated with a variety of cellular activities BF38_RS15860 SM00420 helix_turn_helix, Deoxyribose operon repressor BF38_RS15860 SM01134 BF38_RS15860 BF38_RS15870 SM00365 Leucine-rich repeat, SDS22-like subfamily BF38_RS15870 SM00369 Leucine-rich repeats, typical (most populated) subfamily BF38_RS15870 SM00725 NEAr Transporter domain BF38_RS15875 SM01007 Class II Aldolase and Adducin N-terminal domain BF38_RS15895 SM00387 Histidine kinase-like ATPases BF38_RS15895 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS15900 SM00347 helix_turn_helix multiple antibiotic resistance protein BF38_RS15920 SM00387 Histidine kinase-like ATPases BF38_RS15920 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS15995 SM00465 GIY-YIG type nucleases (URI domain) BF38_RS15995 SM00496 Intron-encoded nuclease repeat 2 BF38_RS16010 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS16015 SM00382 ATPases associated with a variety of cellular activities BF38_RS16025 SM00382 ATPases associated with a variety of cellular activities BF38_RS16045 SM00344 helix_turn_helix ASNC type BF38_RS16165 SM00347 helix_turn_helix multiple antibiotic resistance protein BF38_RS16240 SM00917 LeuA allosteric (dimerisation) domain BF38_RS16245 SM01329 BF38_RS16245 BF38_RS16430 SM00387 Histidine kinase-like ATPases BF38_RS16435 SM00421 helix_turn_helix, Lux Regulon BF38_RS16435 SM00448 cheY-homologous receiver domain BF38_RS16530 SM00091 PAS domain BF38_RS16530 SM00387 Histidine kinase-like ATPases BF38_RS16530 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS16550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS16550 SM00387 Histidine kinase-like ATPases BF38_RS16550 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS16605 SM00363 S4 RNA-binding domain BF38_RS16625 SM00448 cheY-homologous receiver domain BF38_RS16625 SM00862 Transcriptional regulatory protein, C terminal BF38_RS16630 SM00091 PAS domain BF38_RS16630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS16630 SM00387 Histidine kinase-like ATPases BF38_RS16630 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS16640 SM00257 Lysin motif BF38_RS16665 SM00487 DEAD-like helicases superfamily BF38_RS16665 SM00490 helicase superfamily c-terminal domain BF38_RS16675 SM00257 Lysin motif BF38_RS16685 SM00422 helix_turn_helix, mercury resistance BF38_RS16695 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BF38_RS16710 SM00644 BF38_RS16710 BF38_RS16720 SM00870 BF38_RS16720 BF38_RS16735 SM00316 Ribosomal protein S1-like RNA-binding domain BF38_RS16740 SM01240 BF38_RS16740 BF38_RS16795 SM00411 bacterial (prokaryotic) histone like domain BF38_RS16820 SM00562 BF38_RS16820 BF38_RS16840 SM00028 Tetratricopeptide repeats BF38_RS16845 SM00914 BF38_RS16845 BF38_RS16890 SM00986 Uracil DNA glycosylase superfamily BF38_RS16890 SM00987 UreE urease accessory protein, C-terminal domain BF38_RS16910 SM00851 MGS-like domain BF38_RS16960 SM00479 BF38_RS16960 BF38_RS16960 SM00491 BF38_RS16960 BF38_RS16985 SM00478 endonuclease III BF38_RS16985 SM00525 BF38_RS16985 BF38_RS16995 SM00060 Fibronectin type 3 domain BF38_RS17045 SM00981 BF38_RS17045 BF38_RS17055 SM00491 BF38_RS17055 BF38_RS17115 SM00450 Rhodanese Homology Domain BF38_RS17145 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BF38_RS17145 SM00475 5'-3' exonuclease BF38_RS17255 SM00357 Cold shock protein domain BF38_RS17305 SM00849 Metallo-beta-lactamase superfamily BF38_RS17310 SM00422 helix_turn_helix, mercury resistance BF38_RS17310 SM00871 Bacterial transcription activator, effector binding domain BF38_RS17400 SM00448 cheY-homologous receiver domain BF38_RS17405 SM00073 Histidine Phosphotransfer domain BF38_RS17405 SM00260 Two component signalling adaptor domain BF38_RS17405 SM00387 Histidine kinase-like ATPases BF38_RS17405 SM01231 BF38_RS17405 BF38_RS17425 SM00138 Methyltransferase, chemotaxis proteins BF38_RS17500 SM00382 ATPases associated with a variety of cellular activities BF38_RS17535 SM00260 Two component signalling adaptor domain BF38_RS17535 SM00448 cheY-homologous receiver domain BF38_RS17605 SM00382 ATPases associated with a variety of cellular activities BF38_RS17605 SM00962 SRP54-type protein, GTPase domain BF38_RS17615 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BF38_RS17660 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS17680 SM00382 ATPases associated with a variety of cellular activities BF38_RS17695 SM00849 Metallo-beta-lactamase superfamily BF38_RS17695 SM01027 Beta-Casp domain BF38_RS17715 SM00835 Cupin BF38_RS17730 SM00855 Phosphoglycerate mutase family BF38_RS17750 SM00347 helix_turn_helix multiple antibiotic resistance protein BF38_RS17790 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS17790 SM00895 BF38_RS17790 BF38_RS17800 SM00833 Cobalamin synthesis protein cobW C-terminal domain BF38_RS17825 SM00422 helix_turn_helix, mercury resistance BF38_RS17900 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS17940 SM00421 helix_turn_helix, Lux Regulon BF38_RS17940 SM00448 cheY-homologous receiver domain BF38_RS17950 SM00382 ATPases associated with a variety of cellular activities BF38_RS17965 SM00155 Phospholipase D. Active site motifs. BF38_RS17985 SM00919 Malic enzyme, NAD binding domain BF38_RS17985 SM01274 BF38_RS17985 BF38_RS17990 SM00387 Histidine kinase-like ATPases BF38_RS17995 SM00448 cheY-homologous receiver domain BF38_RS18000 SM00487 DEAD-like helicases superfamily BF38_RS18000 SM00490 helicase superfamily c-terminal domain BF38_RS18065 SM00646 BF38_RS18065 BF38_RS18070 SM00047 Lysozyme subfamily 2 BF38_RS18225 SM00854 Bacterial capsule synthesis protein PGA_cap BF38_RS18255 SM00850 LytTr DNA-binding domain BF38_RS18295 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS18315 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS18320 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS18345 SM00382 ATPases associated with a variety of cellular activities BF38_RS18455 SM00843 BF38_RS18455 BF38_RS18490 SM00507 HNH nucleases BF38_RS18585 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS18635 SM00729 Elongator protein 3, MiaB family, Radical SAM BF38_RS18645 SM00448 cheY-homologous receiver domain BF38_RS18645 SM00862 Transcriptional regulatory protein, C terminal BF38_RS18650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS18650 SM00387 Histidine kinase-like ATPases BF38_RS18650 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS18665 SM00450 Rhodanese Homology Domain BF38_RS18715 SM01133 BF38_RS18715 BF38_RS18725 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BF38_RS18760 SM01011 Aminopeptidase P, N-terminal domain BF38_RS18770 SM00287 Bacterial SH3 domain homologues BF38_RS18780 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BF38_RS18780 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BF38_RS18780 SM00493 BF38_RS18780 BF38_RS18875 SM00833 Cobalamin synthesis protein cobW C-terminal domain BF38_RS18910 SM00382 ATPases associated with a variety of cellular activities BF38_RS18915 SM00382 ATPases associated with a variety of cellular activities BF38_RS18950 SM00347 helix_turn_helix multiple antibiotic resistance protein BF38_RS18970 SM00382 ATPases associated with a variety of cellular activities BF38_RS18975 SM00382 ATPases associated with a variety of cellular activities BF38_RS19010 SM00287 Bacterial SH3 domain homologues BF38_RS19020 SM00382 ATPases associated with a variety of cellular activities BF38_RS19025 SM00448 cheY-homologous receiver domain BF38_RS19025 SM00862 Transcriptional regulatory protein, C terminal BF38_RS19030 SM00387 Histidine kinase-like ATPases BF38_RS19030 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS19110 SM00448 cheY-homologous receiver domain BF38_RS19110 SM00862 Transcriptional regulatory protein, C terminal BF38_RS19115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS19115 SM00387 Histidine kinase-like ATPases BF38_RS19115 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS19205 SM00460 Transglutaminase/protease-like homologues BF38_RS19230 SM00966 SpoVT / AbrB like domain BF38_RS19250 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF38_RS19285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF38_RS19285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS19350 SM00833 Cobalamin synthesis protein cobW C-terminal domain BF38_RS19465 SM00855 Phosphoglycerate mutase family BF38_RS19515 SM00155 Phospholipase D. Active site motifs. BF38_RS19540 SM01091 Transporter associated domain BF38_RS19615 SM00244 prohibitin homologues BF38_RS19620 SM00855 Phosphoglycerate mutase family BF38_RS19635 SM01005 Alanine racemase, C-terminal domain BF38_RS19665 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS19800 SM00487 DEAD-like helicases superfamily BF38_RS19800 SM00490 helicase superfamily c-terminal domain BF38_RS19820 SM00829 Enoylreductase BF38_RS19845 SM00849 Metallo-beta-lactamase superfamily BF38_RS19860 SM00460 Transglutaminase/protease-like homologues BF38_RS19875 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BF38_RS19935 SM00100 Cyclic nucleotide-monophosphate binding domain BF38_RS19935 SM00419 helix_turn_helix, cAMP Regulatory protein BF38_RS19940 SM00729 Elongator protein 3, MiaB family, Radical SAM BF38_RS19950 SM00852 Probable molybdopterin binding domain BF38_RS20010 SM00894 Excalibur calcium-binding domain BF38_RS20055 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF38_RS20060 SM00382 ATPases associated with a variety of cellular activities BF38_RS20080 SM00567 E-Z type HEAT repeats BF38_RS20080 SM00932 Scaffold protein Nfu/NifU N terminal BF38_RS20100 SM00836 DALR anticodon binding domain BF38_RS20100 SM01016 Arginyl tRNA synthetase N terminal dom BF38_RS20120 SM00028 Tetratricopeptide repeats BF38_RS20150 SM00327 von Willebrand factor (vWF) type A domain BF38_RS20165 SM00382 ATPases associated with a variety of cellular activities BF38_RS20175 SM00028 Tetratricopeptide repeats BF38_RS20275 SM00448 cheY-homologous receiver domain BF38_RS20275 SM00862 Transcriptional regulatory protein, C terminal BF38_RS20280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS20280 SM00387 Histidine kinase-like ATPases BF38_RS20280 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS20355 SM00382 ATPases associated with a variety of cellular activities BF38_RS20410 SM00563 Phosphate acyltransferases BF38_RS20515 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BF38_RS20520 SM00421 helix_turn_helix, Lux Regulon BF38_RS20520 SM00448 cheY-homologous receiver domain BF38_RS20535 SM00829 Enoylreductase BF38_RS20595 SM00382 ATPases associated with a variety of cellular activities BF38_RS20635 SM01091 Transporter associated domain BF38_RS20650 SM00387 Histidine kinase-like ATPases BF38_RS20650 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS20665 SM00882 Coenzyme A transferase BF38_RS20670 SM00882 Coenzyme A transferase BF38_RS20685 SM00382 ATPases associated with a variety of cellular activities BF38_RS20725 SM00219 Tyrosine kinase, catalytic domain BF38_RS20735 SM00014 Acid phosphatase homologues BF38_RS20755 SM00860 SMI1 / KNR4 family BF38_RS20815 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BF38_RS20955 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF38_RS20995 SM00823 Phosphopantetheine attachment site BF38_RS20995 SM00824 Thioesterase BF38_RS21000 SM00923 MbtH-like protein BF38_RS21020 SM00411 bacterial (prokaryotic) histone like domain BF38_RS21065 SM00363 S4 RNA-binding domain BF38_RS21070 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BF38_RS21075 SM00382 ATPases associated with a variety of cellular activities BF38_RS21110 SM00849 Metallo-beta-lactamase superfamily BF38_RS21140 SM00849 Metallo-beta-lactamase superfamily BF38_RS21160 SM01059 Chloramphenicol acetyltransferase BF38_RS21185 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS21225 SM00357 Cold shock protein domain BF38_RS21300 SM00859 Semialdehyde dehydrogenase, NAD binding domain BF38_RS21335 SM00382 ATPases associated with a variety of cellular activities BF38_RS21340 SM00382 ATPases associated with a variety of cellular activities BF38_RS21350 SM00646 BF38_RS21350 BF38_RS21360 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS21385 SM00835 Cupin BF38_RS21390 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF38_RS21465 SM01207 BF38_RS21465 BF38_RS21505 SM00849 Metallo-beta-lactamase superfamily BF38_RS21520 SM00487 DEAD-like helicases superfamily BF38_RS21520 SM00490 helicase superfamily c-terminal domain BF38_RS21625 SM00382 ATPases associated with a variety of cellular activities BF38_RS21650 SM00347 helix_turn_helix multiple antibiotic resistance protein BF38_RS21655 SM00855 Phosphoglycerate mutase family BF38_RS21725 SM00014 Acid phosphatase homologues BF38_RS21730 SM00354 helix_turn _helix lactose operon repressor BF38_RS21800 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS21825 SM00646 BF38_RS21825 BF38_RS21840 SM00382 ATPases associated with a variety of cellular activities BF38_RS21845 SM00052 Putative diguanylate phosphodiesterase BF38_RS21845 SM00091 PAS domain BF38_RS21845 SM00267 diguanylate cyclase BF38_RS21865 SM00450 Rhodanese Homology Domain BF38_RS21865 SM00849 Metallo-beta-lactamase superfamily BF38_RS21880 SM00382 ATPases associated with a variety of cellular activities BF38_RS21910 SM00878 Biotin carboxylase C-terminal domain BF38_RS21970 SM00387 Histidine kinase-like ATPases BF38_RS21970 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS21975 SM00448 cheY-homologous receiver domain BF38_RS21975 SM00862 Transcriptional regulatory protein, C terminal BF38_RS22045 SM00422 helix_turn_helix, mercury resistance BF38_RS22045 SM00871 Bacterial transcription activator, effector binding domain BF38_RS22075 SM00342 helix_turn_helix, arabinose operon control protein BF38_RS22085 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS22145 SM00448 cheY-homologous receiver domain BF38_RS22145 SM00862 Transcriptional regulatory protein, C terminal BF38_RS22150 SM00387 Histidine kinase-like ATPases BF38_RS22160 SM00382 ATPases associated with a variety of cellular activities BF38_RS22175 SM00382 ATPases associated with a variety of cellular activities BF38_RS22205 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS22210 SM01209 BF38_RS22210 BF38_RS22330 SM00091 PAS domain BF38_RS22330 SM00387 Histidine kinase-like ATPases BF38_RS22330 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS22355 SM00382 ATPases associated with a variety of cellular activities BF38_RS22365 SM00387 Histidine kinase-like ATPases BF38_RS22365 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS22380 SM00829 Enoylreductase BF38_RS22385 SM00740 BF38_RS22385 BF38_RS22460 SM00422 helix_turn_helix, mercury resistance BF38_RS22495 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS22560 SM00480 DNA polymerase III beta subunit BF38_RS22665 SM00465 GIY-YIG type nucleases (URI domain) BF38_RS22770 SM00642 Alpha-amylase domain BF38_RS22790 SM00871 Bacterial transcription activator, effector binding domain BF38_RS22810 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS22930 SM00382 ATPases associated with a variety of cellular activities BF38_RS22950 SM00420 helix_turn_helix, Deoxyribose operon repressor BF38_RS22950 SM01134 BF38_RS22950 BF38_RS22980 SM00861 Transketolase, pyrimidine binding domain BF38_RS23040 SM00116 Domain in cystathionine beta-synthase and other proteins. BF38_RS23040 SM00382 ATPases associated with a variety of cellular activities BF38_RS23075 SM00060 Fibronectin type 3 domain BF38_RS23075 SM00495 Chitin-binding domain type 3 BF38_RS23120 SM00849 Metallo-beta-lactamase superfamily BF38_RS23190 SM00341 Helicase and RNase D C-terminal BF38_RS23190 SM00487 DEAD-like helicases superfamily BF38_RS23190 SM00490 helicase superfamily c-terminal domain BF38_RS23190 SM00956 BF38_RS23190 BF38_RS23240 SM01131 BF38_RS23240 BF38_RS23270 SM01130 BF38_RS23270 BF38_RS23290 SM00091 PAS domain BF38_RS23290 SM00382 ATPases associated with a variety of cellular activities BF38_RS23360 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BF38_RS23395 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BF38_RS23400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS23400 SM00387 Histidine kinase-like ATPases BF38_RS23400 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS23405 SM00448 cheY-homologous receiver domain BF38_RS23405 SM00862 Transcriptional regulatory protein, C terminal BF38_RS23590 SM00382 ATPases associated with a variety of cellular activities BF38_RS23595 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS23670 SM00062 Bacterial periplasmic substrate-binding proteins BF38_RS23675 SM00382 ATPases associated with a variety of cellular activities BF38_RS23705 SM00028 Tetratricopeptide repeats BF38_RS23795 SM00382 ATPases associated with a variety of cellular activities BF38_RS23840 SM00830 Chorismate mutase type II BF38_RS23875 SM00287 Bacterial SH3 domain homologues BF38_RS23900 SM00091 PAS domain BF38_RS23900 SM00382 ATPases associated with a variety of cellular activities BF38_RS23930 SM00382 ATPases associated with a variety of cellular activities BF38_RS23950 SM01133 BF38_RS23950 BF38_RS23980 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF38_RS24000 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BF38_RS24025 SM00346 helix_turn_helix isocitrate lyase regulation BF38_RS24045 SM00098 Alkaline phosphatase homologues BF38_RS24055 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS24080 SM00850 LytTr DNA-binding domain BF38_RS24180 SM01060 BF38_RS24180 BF38_RS24215 SM00382 ATPases associated with a variety of cellular activities BF38_RS24230 SM00347 helix_turn_helix multiple antibiotic resistance protein BF38_RS24235 SM00889 Elongation factor G, domain IV BF38_RS24305 SM00855 Phosphoglycerate mutase family BF38_RS24320 SM00422 helix_turn_helix, mercury resistance BF38_RS24360 SM00382 ATPases associated with a variety of cellular activities BF38_RS24365 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS24375 SM00382 ATPases associated with a variety of cellular activities BF38_RS24400 SM00342 helix_turn_helix, arabinose operon control protein BF38_RS24400 SM00871 Bacterial transcription activator, effector binding domain BF38_RS24425 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS24555 SM00797 Allophanate hydrolase subunit 2 BF38_RS24560 SM00796 Allophanate hydrolase subunit 1 BF38_RS24565 SM00346 helix_turn_helix isocitrate lyase regulation BF38_RS24585 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF38_RS24655 SM00849 Metallo-beta-lactamase superfamily BF38_RS24730 SM00870 BF38_RS24730 BF38_RS24735 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS24760 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BF38_RS24760 SM00091 PAS domain BF38_RS24760 SM00387 Histidine kinase-like ATPases BF38_RS24760 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS24785 SM00342 helix_turn_helix, arabinose operon control protein BF38_RS24795 SM00465 GIY-YIG type nucleases (URI domain) BF38_RS24835 SM00448 cheY-homologous receiver domain BF38_RS24840 SM00387 Histidine kinase-like ATPases BF38_RS24865 SM01060 BF38_RS24865 BF38_RS24990 SM00421 helix_turn_helix, Lux Regulon BF38_RS25010 SM00226 Low molecular weight phosphatase family BF38_RS25025 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF38_RS25050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS25050 SM00387 Histidine kinase-like ATPases BF38_RS25050 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS25055 SM00448 cheY-homologous receiver domain BF38_RS25055 SM00862 Transcriptional regulatory protein, C terminal BF38_RS25080 SM00344 helix_turn_helix ASNC type BF38_RS25115 SM00342 helix_turn_helix, arabinose operon control protein BF38_RS25145 SM00347 helix_turn_helix multiple antibiotic resistance protein BF38_RS25185 SM00448 cheY-homologous receiver domain BF38_RS25185 SM00862 Transcriptional regulatory protein, C terminal BF38_RS25190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS25190 SM00387 Histidine kinase-like ATPases BF38_RS25190 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS25250 SM00849 Metallo-beta-lactamase superfamily BF38_RS25290 SM00422 helix_turn_helix, mercury resistance BF38_RS25310 SM00382 ATPases associated with a variety of cellular activities BF38_RS25320 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF38_RS25335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS25335 SM00387 Histidine kinase-like ATPases BF38_RS25335 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS25340 SM00448 cheY-homologous receiver domain BF38_RS25340 SM00862 Transcriptional regulatory protein, C terminal BF38_RS25425 SM00354 helix_turn _helix lactose operon repressor BF38_RS25430 SM00028 Tetratricopeptide repeats BF38_RS25465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF38_RS25465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF38_RS25465 SM00319 Homologues of the ligand binding domain of Tar BF38_RS25520 SM00344 helix_turn_helix ASNC type BF38_RS25565 SM00342 helix_turn_helix, arabinose operon control protein BF38_RS25585 SM00287 Bacterial SH3 domain homologues BF38_RS25585 SM00644 BF38_RS25585 BF38_RS25635 SM00347 helix_turn_helix multiple antibiotic resistance protein BF38_RS25715 SM00382 ATPases associated with a variety of cellular activities BF38_RS25770 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS25830 SM00382 ATPases associated with a variety of cellular activities BF38_RS25845 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS25905 SM01266 BF38_RS25905 BF38_RS25915 SM00382 ATPases associated with a variety of cellular activities BF38_RS25965 SM00028 Tetratricopeptide repeats BF38_RS25990 SM01091 Transporter associated domain BF38_RS25995 SM00422 helix_turn_helix, mercury resistance BF38_RS26035 SM01350 BF38_RS26035 BF38_RS26040 SM00861 Transketolase, pyrimidine binding domain BF38_RS26065 SM00829 Enoylreductase BF38_RS26085 SM01276 BF38_RS26085 BF38_RS26125 SM00914 BF38_RS26125 BF38_RS26155 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS26155 SM00866 BF38_RS26155 BF38_RS26195 SM00849 Metallo-beta-lactamase superfamily BF38_RS26250 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF38_RS26255 SM00636 BF38_RS26255 BF38_RS26290 SM00871 Bacterial transcription activator, effector binding domain BF38_RS26310 SM00382 ATPases associated with a variety of cellular activities BF38_RS26335 SM00849 Metallo-beta-lactamase superfamily BF38_RS26405 SM00849 Metallo-beta-lactamase superfamily BF38_RS26410 SM00829 Enoylreductase BF38_RS26530 SM00829 Enoylreductase BF38_RS26535 SM00855 Phosphoglycerate mutase family BF38_RS26545 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BF38_RS26545 SM00534 ATPase domain of DNA mismatch repair MUTS family BF38_RS26555 SM00642 Alpha-amylase domain BF38_RS26620 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF38_RS26625 SM00829 Enoylreductase BF38_RS26650 SM00028 Tetratricopeptide repeats BF38_RS26735 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BF38_RS26780 SM00479 BF38_RS26780 BF38_RS26785 SM00357 Cold shock protein domain BF38_RS26810 SM01022 BF38_RS26810 BF38_RS26890 SM00530 Helix-turn-helix XRE-family like proteins BF38_RS27015 SM00852 Probable molybdopterin binding domain BF38_RS27030 SM00729 Elongator protein 3, MiaB family, Radical SAM BF38_RS27050 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BF38_RS27050 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BF38_RS27165 SM00382 ATPases associated with a variety of cellular activities BF38_RS27180 SM00434 DNA Topoisomerase IV BF38_RS27185 SM00387 Histidine kinase-like ATPases BF38_RS27185 SM00433 TopoisomeraseII BF38_RS27195 SM00881 CoA binding domain BF38_RS27200 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF38_RS27205 SM00448 cheY-homologous receiver domain BF38_RS27205 SM00862 Transcriptional regulatory protein, C terminal BF38_RS27220 SM01207 BF38_RS27220 BF38_RS27235 SM00257 Lysin motif BF38_RS27235 SM00636 BF38_RS27235 BF38_RS27255 SM00479 BF38_RS27255 BF38_RS27270 SM00382 ATPases associated with a variety of cellular activities BF38_RS27315 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BF38_RS27380 SM00644 BF38_RS27380 BF38_RS27380 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BF38_RS27385 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BF38_RS27400 SM00091 PAS domain BF38_RS27400 SM00387 Histidine kinase-like ATPases BF38_RS27400 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS27430 SM01058 CarD-like/TRCF domain BF38_RS27525 SM00382 ATPases associated with a variety of cellular activities BF38_RS27570 SM00644 BF38_RS27570 BF38_RS27585 SM00382 ATPases associated with a variety of cellular activities BF38_RS27590 SM00382 ATPases associated with a variety of cellular activities BF38_RS27605 SM00861 Transketolase, pyrimidine binding domain BF38_RS27630 SM00382 ATPases associated with a variety of cellular activities BF38_RS27635 SM00062 Bacterial periplasmic substrate-binding proteins BF38_RS27650 SM00857 Resolvase, N terminal domain BF38_RS27700 SM01230 BF38_RS27700 BF38_RS27705 SM00422 helix_turn_helix, mercury resistance BF38_RS27730 SM00382 ATPases associated with a variety of cellular activities BF38_RS27760 SM00287 Bacterial SH3 domain homologues BF38_RS27775 SM00420 helix_turn_helix, Deoxyribose operon repressor BF38_RS27775 SM01134 BF38_RS27775 BF38_RS27805 SM00636 BF38_RS27805 BF38_RS27820 SM00411 bacterial (prokaryotic) histone like domain BF38_RS27850 SM00382 ATPases associated with a variety of cellular activities BF38_RS27875 SM00342 helix_turn_helix, arabinose operon control protein BF38_RS27885 SM00478 endonuclease III BF38_RS27920 SM00052 Putative diguanylate phosphodiesterase BF38_RS27920 SM00091 PAS domain BF38_RS27920 SM00267 diguanylate cyclase BF38_RS27950 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS27970 SM00148 Phospholipase C, catalytic domain (part); domain X BF38_RS27980 SM00257 Lysin motif BF38_RS28010 SM00853 MutL C terminal dimerisation domain BF38_RS28010 SM01340 BF38_RS28010 BF38_RS28015 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BF38_RS28015 SM00534 ATPase domain of DNA mismatch repair MUTS family BF38_RS28030 SM00729 Elongator protein 3, MiaB family, Radical SAM BF38_RS28060 SM00322 K homology RNA-binding domain BF38_RS28060 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF38_RS28070 SM00382 ATPases associated with a variety of cellular activities BF38_RS28075 SM00852 Probable molybdopterin binding domain BF38_RS28125 SM00382 ATPases associated with a variety of cellular activities BF38_RS28135 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS28135 SM00866 BF38_RS28135 BF38_RS28140 SM00382 ATPases associated with a variety of cellular activities BF38_RS28140 SM00843 BF38_RS28140 BF38_RS28155 SM00849 Metallo-beta-lactamase superfamily BF38_RS28165 SM01130 BF38_RS28165 BF38_RS28175 SM00859 Semialdehyde dehydrogenase, NAD binding domain BF38_RS28205 SM00316 Ribosomal protein S1-like RNA-binding domain BF38_RS28205 SM00322 K homology RNA-binding domain BF38_RS28210 SM01387 BF38_RS28210 BF38_RS28215 SM00904 Riboflavin kinase BF38_RS28250 SM00316 Ribosomal protein S1-like RNA-binding domain BF38_RS28250 SM00322 K homology RNA-binding domain BF38_RS28260 SM00479 BF38_RS28260 BF38_RS28260 SM00481 DNA polymerase alpha chain like domain BF38_RS28270 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF38_RS28315 SM00382 ATPases associated with a variety of cellular activities BF38_RS28315 SM01086 C-terminal, D2-small domain, of ClpB protein BF38_RS28335 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BF38_RS28335 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BF38_RS28335 SM00493 BF38_RS28335 BF38_RS28345 SM00881 CoA binding domain BF38_RS28395 SM00382 ATPases associated with a variety of cellular activities BF38_RS28395 SM00962 SRP54-type protein, GTPase domain BF38_RS28395 SM00963 SRP54-type protein, helical bundle domain BF38_RS28405 SM00382 ATPases associated with a variety of cellular activities BF38_RS28405 SM00962 SRP54-type protein, GTPase domain BF38_RS28405 SM00963 SRP54-type protein, helical bundle domain BF38_RS28410 SM00968 SMC proteins Flexible Hinge Domain BF38_RS28415 SM00358 Double-stranded RNA binding motif BF38_RS28415 SM00535 Ribonuclease III family BF38_RS28425 SM00822 BF38_RS28425 BF38_RS28430 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BF38_RS28445 SM00487 DEAD-like helicases superfamily BF38_RS28445 SM00490 helicase superfamily c-terminal domain BF38_RS28450 SM01120 BF38_RS28450 BF38_RS28450 SM01121 BF38_RS28450 BF38_RS28470 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BF38_RS28485 SM00220 Serine/Threonine protein kinases, catalytic domain BF38_RS28485 SM00740 BF38_RS28485 BF38_RS28490 SM00331 Sigma factor PP2C-like phosphatases BF38_RS28490 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BF38_RS28515 SM00487 DEAD-like helicases superfamily BF38_RS28515 SM00490 helicase superfamily c-terminal domain BF38_RS28525 SM01409 BF38_RS28525 BF38_RS28530 SM00072 Guanylate kinase homologues. BF38_RS28545 SM00831 Cation transporter/ATPase, N-terminus BF38_RS28595 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BF38_RS28610 SM00851 MGS-like domain BF38_RS28610 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BF38_RS28610 SM01209 BF38_RS28610 BF38_RS28615 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BF38_RS28640 SM00363 S4 RNA-binding domain BF38_RS28665 SM00363 S4 RNA-binding domain BF38_RS28710 SM00864 Tubulin/FtsZ family, GTPase domain BF38_RS28710 SM00865 Tubulin/FtsZ family, C-terminal domain BF38_RS28715 SM00842 Cell division protein FtsA BF38_RS28755 SM00740 BF38_RS28755 BF38_RS28760 SM00740 BF38_RS28760 BF38_RS28790 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains BF38_RS28810 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF38_RS28850 SM00855 Phosphoglycerate mutase family BF38_RS28915 SM00878 Biotin carboxylase C-terminal domain BF38_RS28935 SM00670 Large family of predicted nucleotide-binding domains BF38_RS28960 SM00838 Elongation factor G C-terminus BF38_RS29040 SM00861 Transketolase, pyrimidine binding domain BF38_RS29070 SM00849 Metallo-beta-lactamase superfamily BF38_RS29135 SM00052 Putative diguanylate phosphodiesterase BF38_RS29180 SM00267 diguanylate cyclase BF38_RS29230 SM00387 Histidine kinase-like ATPases BF38_RS29230 SM00388 His Kinase A (phosphoacceptor) domain BF38_RS29245 SM00354 helix_turn _helix lactose operon repressor BF38_RS29265 SM00642 Alpha-amylase domain BF38_RS29270 SM00642 Alpha-amylase domain BF38_RS29275 SM00382 ATPases associated with a variety of cellular activities BF38_RS29310 SM00382 ATPases associated with a variety of cellular activities BF38_RS29395 SM01007 Class II Aldolase and Adducin N-terminal domain BF38_RS29420 SM00267 diguanylate cyclase BF38_RS29455 SM01061 CAT RNA binding domain BF38_RS29465 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS29465 SM00866 BF38_RS29465 BF38_RS29480 SM00849 Metallo-beta-lactamase superfamily BF38_RS29585 SM00387 Histidine kinase-like ATPases BF38_RS29595 SM00936 Penicillin-binding protein 5, C-terminal domain BF38_RS29600 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS29605 SM00382 ATPases associated with a variety of cellular activities BF38_RS29630 SM00347 helix_turn_helix multiple antibiotic resistance protein BF38_RS29650 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BF38_RS29745 SM00354 helix_turn _helix lactose operon repressor BF38_RS29765 SM00704 CDGSH-type zinc finger. Function unknown. BF38_RS29795 SM00729 Elongator protein 3, MiaB family, Radical SAM BF38_RS29795 SM00876 Biotin and Thiamin Synthesis associated domain BF38_RS29845 SM00347 helix_turn_helix multiple antibiotic resistance protein BF38_RS29880 SM00859 Semialdehyde dehydrogenase, NAD binding domain BF38_RS29895 SM00849 Metallo-beta-lactamase superfamily BF38_RS29920 SM00849 Metallo-beta-lactamase superfamily BF38_RS29970 SM00382 ATPases associated with a variety of cellular activities BF38_RS29980 SM00062 Bacterial periplasmic substrate-binding proteins BF38_RS29980 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BF38_RS30020 SM00861 Transketolase, pyrimidine binding domain BF38_RS30040 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BF38_RS30055 SM00091 PAS domain BF38_RS30055 SM00382 ATPases associated with a variety of cellular activities BF38_RS30080 SM00448 cheY-homologous receiver domain BF38_RS30085 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF38_RS30100 SM00363 S4 RNA-binding domain BF38_RS30105 SM00861 Transketolase, pyrimidine binding domain BF38_RS30140 SM00878 Biotin carboxylase C-terminal domain BF38_RS30190 SM00382 ATPases associated with a variety of cellular activities BF38_RS30210 SM00841 Elongation factor P, C-terminal BF38_RS30210 SM01185 BF38_RS30210 BF38_RS30245 SM00529 Helix-turn-helix diphteria tox regulatory element BF38_RS30265 SM00450 Rhodanese Homology Domain BF38_RS30270 SM00354 helix_turn _helix lactose operon repressor BF38_RS30325 SM00382 ATPases associated with a variety of cellular activities BF38_RS30330 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF38_RS30360 SM00487 DEAD-like helicases superfamily BF38_RS30360 SM00490 helicase superfamily c-terminal domain BF38_RS30395 SM00702 Prolyl 4-hydroxylase alpha subunit homologues.