locus-tag class description MC28_RS00080 PF00571 CBS domain MC28_RS00095 PF00246 Zinc carboxypeptidase MC28_RS00095 PF08239 Bacterial SH3 domain MC28_RS00100 PF03070 TENA/THI-4/PQQC family MC28_RS00105 PF00005 ABC transporter MC28_RS00110 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS00115 PF09084 NMT1/THI5 like MC28_RS00120 PF02581 Thiamine monophosphate synthase MC28_RS00125 PF01266 FAD dependent oxidoreductase MC28_RS00130 PF02597 ThiS family MC28_RS00135 PF05690 Thiazole biosynthesis protein ThiG MC28_RS00140 PF00899 ThiF family MC28_RS00145 PF08543 Phosphomethylpyrimidine kinase MC28_RS00170 PF03814 Potassium-transporting ATPase A subunit MC28_RS00180 PF02669 K+-transporting ATPase, c chain MC28_RS00185 PF02702 Osmosensitive K+ channel His kinase sensor domain MC28_RS00190 PF07690 Major Facilitator Superfamily MC28_RS00195 PF01047 MarR family MC28_RS00215 PF02653 Branched-chain amino acid transport system / permease component MC28_RS00220 PF00005 ABC transporter MC28_RS00225 PF13407 Periplasmic binding protein domain MC28_RS00230 PF00860 Permease family MC28_RS00240 PF03734 L,D-transpeptidase catalytic domain MC28_RS00240 PF17969 L,D-transpeptidase C-terminal domain MC28_RS00255 PF00085 Thioredoxin MC28_RS00260 PF02600 Disulfide bond formation protein DsbB MC28_RS00265 PF14148 YhdB-like protein MC28_RS00275 PF03845 Spore germination protein MC28_RS00285 PF03323 Bacillus/Clostridium GerA spore germination protein MC28_RS00295 PF00881 Nitroreductase family MC28_RS00300 PF04293 SpoVR like protein MC28_RS00325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MC28_RS00325 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC28_RS00330 PF02583 Metal-sensitive transcriptional repressor MC28_RS00335 PF01206 Sulfurtransferase TusA MC28_RS00335 PF00581 Rhodanese-like domain MC28_RS00340 PF00581 Rhodanese-like domain MC28_RS00340 PF00753 Metallo-beta-lactamase superfamily MC28_RS00345 PF01206 Sulfurtransferase TusA MC28_RS00350 PF00581 Rhodanese-like domain MC28_RS00350 PF01206 Sulfurtransferase TusA MC28_RS00355 PF00581 Rhodanese-like domain MC28_RS00360 PF13686 DsrE/DsrF/DrsH-like family MC28_RS00365 PF01925 Sulfite exporter TauE/SafE MC28_RS00375 PF03816 Cell envelope-related transcriptional attenuator domain MC28_RS00380 PF08240 Alcohol dehydrogenase GroES-like domain MC28_RS00380 PF00107 Zinc-binding dehydrogenase MC28_RS00385 PF02690 Na+/Pi-cotransporter MC28_RS00390 PF00107 Zinc-binding dehydrogenase MC28_RS00390 PF08240 Alcohol dehydrogenase GroES-like domain MC28_RS00395 PF07690 Major Facilitator Superfamily MC28_RS00405 PF08279 HTH domain MC28_RS00405 PF05043 Mga helix-turn-helix domain MC28_RS00405 PF00874 PRD domain MC28_RS00405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MC28_RS00410 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit MC28_RS00415 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MC28_RS00420 PF02378 Phosphotransferase system, EIIC MC28_RS00435 PF06725 3D domain MC28_RS00435 PF01476 LysM domain MC28_RS00440 PF12704 MacB-like periplasmic core domain MC28_RS00440 PF02687 FtsX-like permease family MC28_RS00445 PF00005 ABC transporter MC28_RS00470 PF05525 Branched-chain amino acid transport protein MC28_RS00475 PF05067 Manganese containing catalase MC28_RS00480 PF12652 CotJB protein MC28_RS00485 PF11007 Spore coat associated protein JA (CotJA) MC28_RS00510 PF09335 SNARE associated Golgi protein MC28_RS00545 PF13520 Amino acid permease MC28_RS00550 PF00999 Sodium/hydrogen exchanger family MC28_RS00560 PF01418 Helix-turn-helix domain, rpiR family MC28_RS00560 PF01380 SIS domain MC28_RS00565 PF13580 SIS domain MC28_RS00570 PF00367 phosphotransferase system, EIIB MC28_RS00570 PF02378 Phosphotransferase system, EIIC MC28_RS00580 PF07681 DoxX MC28_RS00595 PF00892 EamA-like transporter family MC28_RS00600 PF01037 Lrp/AsnC ligand binding domain MC28_RS00610 PF00561 alpha/beta hydrolase fold MC28_RS00610 PF00106 short chain dehydrogenase MC28_RS00615 PF13411 MerR HTH family regulatory protein MC28_RS00625 PF00893 Small Multidrug Resistance protein MC28_RS00630 PF00893 Small Multidrug Resistance protein MC28_RS00635 PF17934 Tetracyclin repressor-like, C-terminal domain MC28_RS00635 PF00440 Bacterial regulatory proteins, tetR family MC28_RS00640 PF07690 Major Facilitator Superfamily MC28_RS00645 PF01638 HxlR-like helix-turn-helix MC28_RS00655 PF02525 Flavodoxin-like fold MC28_RS00665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC28_RS00665 PF12793 Sugar transport-related sRNA regulator N-term MC28_RS00670 PF07690 Major Facilitator Superfamily MC28_RS00680 PF01965 DJ-1/PfpI family MC28_RS00690 PF13520 Amino acid permease MC28_RS00695 PF01177 Asp/Glu/Hydantoin racemase MC28_RS00700 PF00171 Aldehyde dehydrogenase family MC28_RS00705 PF00005 ABC transporter MC28_RS00705 PF00664 ABC transporter transmembrane region MC28_RS00710 PF00005 ABC transporter MC28_RS00710 PF00664 ABC transporter transmembrane region MC28_RS00715 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC28_RS00720 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS00725 PF00005 ABC transporter MC28_RS00730 PF00269 Small, acid-soluble spore proteins, alpha/beta type MC28_RS00745 PF14398 YheC/D like ATP-grasp MC28_RS00755 PF04286 Protein of unknown function (DUF445) MC28_RS00760 PF06133 Control of competence regulator ComK, YlbF/YmcA MC28_RS00765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MC28_RS00765 PF00205 Thiamine pyrophosphate enzyme, central domain MC28_RS00765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MC28_RS00770 PF03306 Alpha-acetolactate decarboxylase MC28_RS00775 PF02245 Methylpurine-DNA glycosylase (MPG) MC28_RS00795 PF04055 Radical SAM superfamily MC28_RS00800 PF00501 AMP-binding enzyme MC28_RS00800 PF13193 AMP-binding enzyme C-terminal domain MC28_RS00810 PF01740 STAS domain MC28_RS00810 PF00916 Sulfate permease family MC28_RS00820 PF00378 Enoyl-CoA hydratase/isomerase MC28_RS00840 PF05343 M42 glutamyl aminopeptidase MC28_RS00855 PF11121 Protein of unknown function (DUF2639) MC28_RS00865 PF08943 CsiD MC28_RS00870 PF01266 FAD dependent oxidoreductase MC28_RS00875 PF05544 Proline racemase MC28_RS00880 PF02423 Ornithine cyclodeaminase/mu-crystallin family MC28_RS00885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC28_RS00890 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS00895 PF12911 N-terminal TM domain of oligopeptide transport permease C MC28_RS00895 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS00900 PF00005 ABC transporter MC28_RS00900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MC28_RS00905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MC28_RS00905 PF00005 ABC transporter MC28_RS00910 PF04740 LXG domain of WXG superfamily MC28_RS00915 PF04634 Protein of unknown function, DUF600 MC28_RS00950 PF00083 Sugar (and other) transporter MC28_RS00955 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MC28_RS00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS00960 PF08279 HTH domain MC28_RS00960 PF12431 Transcriptional regulator MC28_RS00960 PF00072 Response regulator receiver domain MC28_RS00965 PF03401 Tripartite tricarboxylate transporter family receptor MC28_RS00970 PF00293 NUDIX domain MC28_RS00975 PF08463 EcoEI R protein C-terminal MC28_RS00975 PF00271 Helicase conserved C-terminal domain MC28_RS00975 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) MC28_RS00975 PF04851 Type III restriction enzyme, res subunit MC28_RS00995 PF03796 DnaB-like helicase C terminal domain MC28_RS00995 PF00772 DnaB-like helicase N terminal domain MC28_RS01010 PF01925 Sulfite exporter TauE/SafE MC28_RS01025 PF07690 Major Facilitator Superfamily MC28_RS01070 PF03123 CAT RNA binding domain MC28_RS01070 PF00874 PRD domain MC28_RS01075 PF00367 phosphotransferase system, EIIB MC28_RS01075 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MC28_RS01075 PF02378 Phosphotransferase system, EIIC MC28_RS01080 PF00232 Glycosyl hydrolase family 1 MC28_RS01090 PF01066 CDP-alcohol phosphatidyltransferase MC28_RS01115 PF07690 Major Facilitator Superfamily MC28_RS01140 PF02733 Dak1 domain MC28_RS01155 PF02525 Flavodoxin-like fold MC28_RS01160 PF02082 Transcriptional regulator MC28_RS01175 PF00486 Transcriptional regulatory protein, C terminal MC28_RS01175 PF00072 Response regulator receiver domain MC28_RS01180 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS01180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS01180 PF00672 HAMP domain MC28_RS01195 PF05547 Immune inhibitor A peptidase M6 MC28_RS01210 PF11181 Heat induced stress protein YflT MC28_RS01215 PF05532 CsbD-like MC28_RS01230 PF01740 STAS domain MC28_RS01235 PF13581 Histidine kinase-like ATPase domain MC28_RS01240 PF04545 Sigma-70, region 4 MC28_RS01240 PF04539 Sigma-70 region 3 MC28_RS01240 PF04542 Sigma-70 region 2 MC28_RS01250 PF07228 Stage II sporulation protein E (SpoIIE) MC28_RS01250 PF13426 PAS domain MC28_RS01255 PF01739 CheR methyltransferase, SAM binding domain MC28_RS01255 PF03705 CheR methyltransferase, all-alpha domain MC28_RS01260 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC28_RS01260 PF00072 Response regulator receiver domain MC28_RS01260 PF01627 Hpt domain MC28_RS01260 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS01260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS01280 PF01906 Putative heavy-metal-binding MC28_RS01285 PF00107 Zinc-binding dehydrogenase MC28_RS01285 PF08240 Alcohol dehydrogenase GroES-like domain MC28_RS01300 PF11121 Protein of unknown function (DUF2639) MC28_RS01315 PF00149 Calcineurin-like phosphoesterase MC28_RS01320 PF13514 AAA domain MC28_RS01325 PF01336 OB-fold nucleic acid binding domain MC28_RS01325 PF01966 HD domain MC28_RS01335 PF17863 AAA lid domain MC28_RS01335 PF07726 ATPase family associated with various cellular activities (AAA) MC28_RS01340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC28_RS01345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC28_RS01350 PF17874 MalT-like TPR region MC28_RS01350 PF18801 response regulator aspartate phosphatase H, N terminal MC28_RS01360 PF00561 alpha/beta hydrolase fold MC28_RS01360 PF08386 TAP-like protein MC28_RS01365 PF14147 Sporulation protein YhaL MC28_RS01370 PF01381 Helix-turn-helix MC28_RS01375 PF04309 Glycerol-3-phosphate responsive antiterminator MC28_RS01380 PF00230 Major intrinsic protein MC28_RS01385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MC28_RS01385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MC28_RS01390 PF16901 C-terminal domain of alpha-glycerophosphate oxidase MC28_RS01390 PF01266 FAD dependent oxidoreductase MC28_RS01395 PF04542 Sigma-70 region 2 MC28_RS01395 PF08281 Sigma-70, region 4 MC28_RS01405 PF01098 Cell cycle protein MC28_RS01415 PF13538 UvrD-like helicase C-terminal domain MC28_RS01440 PF01047 MarR family MC28_RS01450 PF01230 HIT domain MC28_RS01455 PF00005 ABC transporter MC28_RS01460 PF05975 Bacterial ABC transporter protein EcsB MC28_RS01465 PF12787 EcsC protein family MC28_RS01475 PF00440 Bacterial regulatory proteins, tetR family MC28_RS01475 PF17934 Tetracyclin repressor-like, C-terminal domain MC28_RS01485 PF03703 Bacterial PH domain MC28_RS01490 PF03703 Bacterial PH domain MC28_RS01540 PF03703 Bacterial PH domain MC28_RS01545 PF03703 Bacterial PH domain MC28_RS01550 PF03992 Antibiotic biosynthesis monooxygenase MC28_RS01555 PF00912 Transglycosylase MC28_RS01555 PF00905 Penicillin binding protein transpeptidase domain MC28_RS01560 PF01208 Uroporphyrinogen decarboxylase (URO-D) MC28_RS01565 PF00762 Ferrochelatase MC28_RS01570 PF01593 Flavin containing amine oxidoreductase MC28_RS01595 PF03965 Penicillinase repressor MC28_RS01605 PF00440 Bacterial regulatory proteins, tetR family MC28_RS01605 PF17932 Tetracyclin repressor-like, C-terminal domain MC28_RS01635 PF00356 Bacterial regulatory proteins, lacI family MC28_RS01640 PF14149 YhfH-like protein MC28_RS01645 PF12706 Beta-lactamase superfamily domain MC28_RS01650 PF03099 Biotin/lipoate A/B protein ligase family MC28_RS01650 PF10437 Bacterial lipoate protein ligase C-terminus MC28_RS01660 PF13193 AMP-binding enzyme C-terminal domain MC28_RS01660 PF00501 AMP-binding enzyme MC28_RS01680 PF00149 Calcineurin-like phosphoesterase MC28_RS01690 PF01966 HD domain MC28_RS01700 PF04542 Sigma-70 region 2 MC28_RS01700 PF08281 Sigma-70, region 4 MC28_RS01705 PF06445 GyrI-like small molecule binding domain MC28_RS01705 PF12833 Helix-turn-helix domain MC28_RS01715 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS01715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS01720 PF00486 Transcriptional regulatory protein, C terminal MC28_RS01720 PF00072 Response regulator receiver domain MC28_RS01740 PF16491 CAAX prenyl protease N-terminal, five membrane helices MC28_RS01740 PF01435 Peptidase family M48 MC28_RS01745 PF00672 HAMP domain MC28_RS01745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC28_RS01745 PF02743 Cache domain MC28_RS01750 PF00892 EamA-like transporter family MC28_RS01755 PF01274 Malate synthase MC28_RS01760 PF00463 Isocitrate lyase family MC28_RS01780 PF00313 'Cold-shock' DNA-binding domain MC28_RS01790 PF06338 ComK protein MC28_RS01795 PF09335 SNARE associated Golgi protein MC28_RS01800 PF10502 Signal peptidase, peptidase S26 MC28_RS01805 PF13361 UvrD-like helicase C-terminal domain MC28_RS01805 PF12705 PD-(D/E)XK nuclease superfamily MC28_RS01810 PF12705 PD-(D/E)XK nuclease superfamily MC28_RS01810 PF00580 UvrD/REP helicase N-terminal domain MC28_RS01810 PF13361 UvrD-like helicase C-terminal domain MC28_RS01815 PF01000 RNA polymerase Rpb3/RpoA insert domain MC28_RS01815 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MC28_RS01815 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MC28_RS01820 PF10676 Spore germination protein gerPA/gerPF MC28_RS01825 PF10970 Spore germination protein GerPE MC28_RS01835 PF10737 Spore germination protein GerPC MC28_RS01840 PF10803 Spore germination GerPB MC28_RS01845 PF10676 Spore germination protein gerPA/gerPF MC28_RS01850 PF09388 Spo0E like sporulation regulatory protein MC28_RS01855 PF01557 Fumarylacetoacetate (FAA) hydrolase family MC28_RS01865 PF00202 Aminotransferase class-III MC28_RS01870 PF07457 Protein of unknown function (DUF1516) MC28_RS01880 PF13537 Glutamine amidotransferase domain MC28_RS01880 PF00733 Asparagine synthase MC28_RS01885 PF00762 Ferrochelatase MC28_RS01890 PF00199 Catalase MC28_RS01890 PF06628 Catalase-related immune-responsive MC28_RS01895 PF00909 Ammonium Transporter Family MC28_RS01900 PF00128 Alpha amylase, catalytic domain MC28_RS01910 PF04461 Protein of unknown function (DUF520) MC28_RS01915 PF13509 S1 domain MC28_RS01915 PF17783 CvfB-like winged helix domain MC28_RS01920 PF05593 RHS Repeat MC28_RS01925 PF05593 RHS Repeat MC28_RS01940 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 MC28_RS01940 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) MC28_RS01945 PF12758 Protein of unknown function (DUF3813) MC28_RS01960 PF14168 YjzC-like protein MC28_RS01965 PF07724 AAA domain (Cdc48 subfamily) MC28_RS01965 PF02861 Clp amino terminal domain, pathogenicity island component MC28_RS01965 PF10431 C-terminal, D2-small domain, of ClpB protein MC28_RS01965 PF00004 ATPase family associated with various cellular activities (AAA) MC28_RS01965 PF17871 AAA lid domain MC28_RS01985 PF10815 ComZ MC28_RS01990 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MC28_RS01990 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MC28_RS01995 PF02801 Beta-ketoacyl synthase, C-terminal domain MC28_RS01995 PF00109 Beta-ketoacyl synthase, N-terminal domain MC28_RS02000 PF10026 Predicted Zn-dependent protease (DUF2268) MC28_RS02005 PF12227 Protein of unknown function (DUF3603) MC28_RS02015 PF00579 tRNA synthetases class I (W and Y) MC28_RS02025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC28_RS02030 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS02035 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS02035 PF12911 N-terminal TM domain of oligopeptide transport permease C MC28_RS02040 PF00005 ABC transporter MC28_RS02040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MC28_RS02045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MC28_RS02045 PF00005 ABC transporter MC28_RS02060 PF01554 MatE MC28_RS02065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC28_RS02075 PF03960 ArsC family MC28_RS02080 PF03741 Integral membrane protein TerC family MC28_RS02085 PF05389 Negative regulator of genetic competence (MecA) MC28_RS02090 PF13396 Phospholipase_D-nuclease N-terminal MC28_RS02090 PF13091 PLD-like domain MC28_RS02100 PF01432 Peptidase family M3 MC28_RS02100 PF08439 Oligopeptidase F MC28_RS02110 PF01152 Bacterial-like globin MC28_RS02115 PF01928 CYTH domain MC28_RS02125 PF04607 Region found in RelA / SpoT proteins MC28_RS02130 PF01513 ATP-NAD kinase MC28_RS02135 PF00849 RNA pseudouridylate synthase MC28_RS02145 PF00149 Calcineurin-like phosphoesterase MC28_RS02150 PF01098 Cell cycle protein MC28_RS02155 PF00535 Glycosyl transferase family 2 MC28_RS02160 PF08241 Methyltransferase domain MC28_RS02165 PF05711 Macrocin-O-methyltransferase (TylF) MC28_RS02175 PF00535 Glycosyl transferase family 2 MC28_RS02175 PF13181 Tetratricopeptide repeat MC28_RS02195 PF00483 Nucleotidyl transferase MC28_RS02200 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MC28_RS02205 PF16363 GDP-mannose 4,6 dehydratase MC28_RS02210 PF04321 RmlD substrate binding domain MC28_RS02230 PF07098 Protein of unknown function (DUF1360) MC28_RS02250 PF00580 UvrD/REP helicase N-terminal domain MC28_RS02250 PF13361 UvrD-like helicase C-terminal domain MC28_RS02255 PF13673 Acetyltransferase (GNAT) domain MC28_RS02265 PF00756 Putative esterase MC28_RS02280 PF02368 Bacterial Ig-like domain (group 2) MC28_RS02285 PF00474 Sodium:solute symporter family MC28_RS02290 PF04715 Anthranilate synthase component I, N terminal region MC28_RS02290 PF00425 chorismate binding enzyme MC28_RS02295 PF02885 Glycosyl transferase family, helical bundle domain MC28_RS02295 PF00117 Glutamine amidotransferase class-I MC28_RS02295 PF00591 Glycosyl transferase family, a/b domain MC28_RS02300 PF02885 Glycosyl transferase family, helical bundle domain MC28_RS02300 PF00591 Glycosyl transferase family, a/b domain MC28_RS02305 PF00218 Indole-3-glycerol phosphate synthase MC28_RS02310 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MC28_RS02315 PF00291 Pyridoxal-phosphate dependent enzyme MC28_RS02320 PF00290 Tryptophan synthase alpha chain MC28_RS02330 PF02652 L-lactate permease MC28_RS02335 PF10042 Uncharacterized conserved protein (DUF2278) MC28_RS02385 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC28_RS02385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MC28_RS02400 PF01209 ubiE/COQ5 methyltransferase family MC28_RS02420 PF00364 Biotin-requiring enzyme MC28_RS02420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MC28_RS02420 PF02817 e3 binding domain MC28_RS02425 PF02779 Transketolase, pyrimidine binding domain MC28_RS02425 PF00676 Dehydrogenase E1 component MC28_RS02425 PF16870 2-oxoglutarate dehydrogenase C-terminal MC28_RS02430 PF01381 Helix-turn-helix MC28_RS02465 PF13732 Domain of unknown function (DUF4162) MC28_RS02465 PF00005 ABC transporter MC28_RS02510 PF14659 Phage integrase, N-terminal SAM-like domain MC28_RS02510 PF00589 Phage integrase family MC28_RS02540 PF00768 D-alanyl-D-alanine carboxypeptidase MC28_RS02540 PF07943 Penicillin-binding protein 5, C-terminal domain MC28_RS02550 PF12389 Camelysin metallo-endopeptidase MC28_RS02565 PF12389 Camelysin metallo-endopeptidase MC28_RS02570 PF08671 Anti-repressor SinI MC28_RS02570 PF01381 Helix-turn-helix MC28_RS02580 PF05547 Immune inhibitor A peptidase M6 MC28_RS02585 PF00171 Aldehyde dehydrogenase family MC28_RS02590 PF00005 ABC transporter MC28_RS02590 PF08402 TOBE domain MC28_RS02595 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS02600 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS02605 PF13416 Bacterial extracellular solute-binding protein MC28_RS02610 PF01569 PAP2 superfamily MC28_RS02615 PF03176 MMPL family MC28_RS02625 PF01479 S4 domain MC28_RS02625 PF00849 RNA pseudouridylate synthase MC28_RS02635 PF00188 Cysteine-rich secretory protein family MC28_RS02640 PF02754 Cysteine-rich domain MC28_RS02640 PF13183 4Fe-4S dicluster domain MC28_RS02645 PF02913 FAD linked oxidases, C-terminal domain MC28_RS02645 PF01565 FAD binding domain MC28_RS02650 PF05651 Putative sugar diacid recognition MC28_RS02650 PF13556 PucR C-terminal helix-turn-helix domain MC28_RS02650 PF17853 GGDEF-like domain MC28_RS02660 PF00486 Transcriptional regulatory protein, C terminal MC28_RS02660 PF00072 Response regulator receiver domain MC28_RS02665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS02665 PF00989 PAS fold MC28_RS02665 PF18698 Histidine kinase sensor domain MC28_RS02665 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS02665 PF00672 HAMP domain MC28_RS02670 PF07729 FCD domain MC28_RS02670 PF00392 Bacterial regulatory proteins, gntR family MC28_RS02675 PF02754 Cysteine-rich domain MC28_RS02680 PF11870 Domain of unknown function (DUF3390) MC28_RS02680 PF02589 LUD domain MC28_RS02680 PF13183 4Fe-4S dicluster domain MC28_RS02685 PF02589 LUD domain MC28_RS02690 PF06750 Bacterial Peptidase A24 N-terminal domain MC28_RS02690 PF01478 Type IV leader peptidase family MC28_RS02700 PF01226 Formate/nitrite transporter MC28_RS02705 PF03741 Integral membrane protein TerC family MC28_RS02710 PF02386 Cation transport protein MC28_RS02715 PF00269 Small, acid-soluble spore proteins, alpha/beta type MC28_RS02720 PF01575 MaoC like domain MC28_RS02745 PF00561 alpha/beta hydrolase fold MC28_RS02755 PF02386 Cation transport protein MC28_RS02775 PF00005 ABC transporter MC28_RS02775 PF08402 TOBE domain MC28_RS02780 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS02785 PF13419 Haloacid dehalogenase-like hydrolase MC28_RS02790 PF00266 Aminotransferase class-V MC28_RS02800 PF08220 DeoR-like helix-turn-helix domain MC28_RS02800 PF00455 DeoR C terminal sensor domain MC28_RS02815 PF00596 Class II Aldolase and Adducin N-terminal domain MC28_RS02825 PF04748 Divergent polysaccharide deacetylase MC28_RS02830 PF09388 Spo0E like sporulation regulatory protein MC28_RS02835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS02835 PF02743 Cache domain MC28_RS02835 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS02840 PF01047 MarR family MC28_RS02850 PF12867 DinB superfamily MC28_RS02860 PF13426 PAS domain MC28_RS02860 PF13188 PAS domain MC28_RS02860 PF00989 PAS fold MC28_RS02860 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS02860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS02865 PF06508 Queuosine biosynthesis protein QueC MC28_RS02870 PF01242 6-pyruvoyl tetrahydropterin synthase MC28_RS02875 PF04055 Radical SAM superfamily MC28_RS02880 PF14489 QueF-like protein MC28_RS02885 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) MC28_RS02900 PF00583 Acetyltransferase (GNAT) family MC28_RS02915 PF07972 NrdI Flavodoxin like MC28_RS02920 PF00317 Ribonucleotide reductase, all-alpha domain MC28_RS02920 PF02867 Ribonucleotide reductase, barrel domain MC28_RS02920 PF08343 Ribonucleotide reductase N-terminal MC28_RS02925 PF00317 Ribonucleotide reductase, all-alpha domain MC28_RS02925 PF02867 Ribonucleotide reductase, barrel domain MC28_RS02925 PF08343 Ribonucleotide reductase N-terminal MC28_RS02930 PF00268 Ribonucleotide reductase, small chain MC28_RS02935 PF00324 Amino acid permease MC28_RS02940 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MC28_RS02940 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MC28_RS02955 PF00158 Sigma-54 interaction domain MC28_RS02955 PF02954 Bacterial regulatory protein, Fis family MC28_RS02955 PF00072 Response regulator receiver domain MC28_RS02960 PF00171 Aldehyde dehydrogenase family MC28_RS02965 PF00202 Aminotransferase class-III MC28_RS02970 PF00392 Bacterial regulatory proteins, gntR family MC28_RS02975 PF00005 ABC transporter MC28_RS02985 PF00005 ABC transporter MC28_RS03005 PF01037 Lrp/AsnC ligand binding domain MC28_RS03015 PF00857 Isochorismatase family MC28_RS03025 PF17676 LD-carboxypeptidase C-terminal domain MC28_RS03025 PF02016 LD-carboxypeptidase N-terminal domain MC28_RS03030 PF03060 Nitronate monooxygenase MC28_RS03035 PF04914 DltD protein MC28_RS03040 PF00550 Phosphopantetheine attachment site MC28_RS03045 PF03062 MBOAT, membrane-bound O-acyltransferase family MC28_RS03050 PF13193 AMP-binding enzyme C-terminal domain MC28_RS03050 PF00501 AMP-binding enzyme MC28_RS03060 PF01546 Peptidase family M20/M25/M40 MC28_RS03060 PF07687 Peptidase dimerisation domain MC28_RS03070 PF00258 Flavodoxin MC28_RS03085 PF01636 Phosphotransferase enzyme family MC28_RS03105 PF01554 MatE MC28_RS03110 PF02673 Bacitracin resistance protein BacA MC28_RS03130 PF01047 MarR family MC28_RS03140 PF00375 Sodium:dicarboxylate symporter family MC28_RS03145 PF02386 Cation transport protein MC28_RS03155 PF09579 Sporulation protein YtfJ (Spore_YtfJ) MC28_RS03165 PF03698 Uncharacterised protein family (UPF0180) MC28_RS03175 PF01063 Amino-transferase class IV MC28_RS03180 PF00205 Thiamine pyrophosphate enzyme, central domain MC28_RS03180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MC28_RS03180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MC28_RS03185 PF10369 Small subunit of acetolactate synthase MC28_RS03185 PF01842 ACT domain MC28_RS03190 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MC28_RS03190 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MC28_RS03195 PF08502 LeuA allosteric (dimerisation) domain MC28_RS03195 PF00682 HMGL-like MC28_RS03200 PF00180 Isocitrate/isopropylmalate dehydrogenase MC28_RS03205 PF00330 Aconitase family (aconitate hydratase) MC28_RS03210 PF00694 Aconitase C-terminal domain MC28_RS03215 PF13393 Histidyl-tRNA synthetase MC28_RS03220 PF01634 ATP phosphoribosyltransferase MC28_RS03225 PF00815 Histidinol dehydrogenase MC28_RS03230 PF00475 Imidazoleglycerol-phosphate dehydratase MC28_RS03235 PF00117 Glutamine amidotransferase class-I MC28_RS03240 PF00977 Histidine biosynthesis protein MC28_RS03245 PF00977 Histidine biosynthesis protein MC28_RS03250 PF01502 Phosphoribosyl-AMP cyclohydrolase MC28_RS03255 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase MC28_RS03260 PF02811 PHP domain MC28_RS03270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MC28_RS03270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MC28_RS03275 PF01066 CDP-alcohol phosphatidyltransferase MC28_RS03280 PF00884 Sulfatase MC28_RS03290 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MC28_RS03290 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MC28_RS03300 PF01507 Phosphoadenosine phosphosulfate reductase family MC28_RS03305 PF01747 ATP-sulfurylase MC28_RS03305 PF14306 PUA-like domain MC28_RS03315 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MC28_RS03315 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MC28_RS03325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MC28_RS03330 PF01903 CbiX MC28_RS03340 PF00209 Sodium:neurotransmitter symporter family MC28_RS03350 PF00375 Sodium:dicarboxylate symporter family MC28_RS03360 PF03553 Na+/H+ antiporter family MC28_RS03375 PF09922 Cell wall-active antibiotics response 4TMS YvqF MC28_RS03380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS03380 PF07730 Histidine kinase MC28_RS03380 PF00672 HAMP domain MC28_RS03385 PF00072 Response regulator receiver domain MC28_RS03385 PF00196 Bacterial regulatory proteins, luxR family MC28_RS03395 PF05525 Branched-chain amino acid transport protein MC28_RS03405 PF01209 ubiE/COQ5 methyltransferase family MC28_RS03430 PF00175 Oxidoreductase NAD-binding domain MC28_RS03430 PF00970 Oxidoreductase FAD-binding domain MC28_RS03430 PF00042 Globin MC28_RS03445 PF01925 Sulfite exporter TauE/SafE MC28_RS03450 PF01384 Phosphate transporter family MC28_RS03455 PF01865 Protein of unknown function DUF47 MC28_RS03460 PF00905 Penicillin binding protein transpeptidase domain MC28_RS03460 PF00912 Transglycosylase MC28_RS03475 PF00989 PAS fold MC28_RS03475 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS03480 PF01904 Protein of unknown function DUF72 MC28_RS03490 PF00589 Phage integrase family MC28_RS03495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS03495 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS03495 PF00989 PAS fold MC28_RS03495 PF16736 Single Cache-like MC28_RS03500 PF01048 Phosphorylase superfamily MC28_RS03510 PF03706 Lysylphosphatidylglycerol synthase TM region MC28_RS03510 PF09924 Uncharacterised conserved protein (DUF2156) MC28_RS03525 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MC28_RS03525 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MC28_RS03530 PF00768 D-alanyl-D-alanine carboxypeptidase MC28_RS03530 PF07943 Penicillin-binding protein 5, C-terminal domain MC28_RS03535 PF07670 Nucleoside recognition MC28_RS03540 PF07670 Nucleoside recognition MC28_RS03545 PF00849 RNA pseudouridylate synthase MC28_RS03545 PF01479 S4 domain MC28_RS03550 PF00578 AhpC/TSA family MC28_RS03555 PF05140 ResB-like family MC28_RS03560 PF01578 Cytochrome C assembly protein MC28_RS03565 PF00486 Transcriptional regulatory protein, C terminal MC28_RS03565 PF00072 Response regulator receiver domain MC28_RS03570 PF00989 PAS fold MC28_RS03570 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS03570 PF00672 HAMP domain MC28_RS03570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS03570 PF18698 Histidine kinase sensor domain MC28_RS03575 PF01923 Cobalamin adenosyltransferase MC28_RS03580 PF01551 Peptidase family M23 MC28_RS03590 PF12822 ECF transporter, substrate-specific component MC28_RS03600 PF14493 Helix-turn-helix domain MC28_RS03605 PF00271 Helicase conserved C-terminal domain MC28_RS03605 PF00270 DEAD/DEAH box helicase MC28_RS03610 PF02517 CPBP intramembrane metalloprotease MC28_RS03620 PF00149 Calcineurin-like phosphoesterase MC28_RS03625 PF13411 MerR HTH family regulatory protein MC28_RS03630 PF05389 Negative regulator of genetic competence (MecA) MC28_RS03635 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MC28_RS03635 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MC28_RS03660 PF17763 Glutaminase/Asparaginase C-terminal domain MC28_RS03660 PF00710 Asparaginase, N-terminal MC28_RS03665 PF02224 Cytidylate kinase MC28_RS03670 PF00575 S1 RNA binding domain MC28_RS03675 PF01070 FMN-dependent dehydrogenase MC28_RS03680 PF14140 YpzI-like protein MC28_RS03690 PF14045 YIEGIA protein MC28_RS03700 PF01926 50S ribosome-binding GTPase MC28_RS03700 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MC28_RS03705 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MC28_RS03705 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MC28_RS03715 PF10966 Protein of unknown function (DUF2768) MC28_RS03725 PF09547 Stage IV sporulation protein A (spore_IV_A) MC28_RS03730 PF00216 Bacterial DNA-binding protein MC28_RS03735 PF01227 GTP cyclohydrolase I MC28_RS03740 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 MC28_RS03745 PF01209 ubiE/COQ5 methyltransferase family MC28_RS03750 PF00348 Polyprenyl synthetase MC28_RS03755 PF00334 Nucleoside diphosphate kinase MC28_RS03760 PF01264 Chorismate synthase MC28_RS03765 PF01761 3-dehydroquinate synthase MC28_RS03770 PF00155 Aminotransferase class I and II MC28_RS03780 PF08864 UPF0302 domain MC28_RS03780 PF08858 IDEAL domain MC28_RS03785 PF10673 Protein of unknown function (DUF2487) MC28_RS03790 PF00355 Rieske [2Fe-2S] domain MC28_RS03795 PF00033 Cytochrome b/b6/petB MC28_RS03800 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MC28_RS03800 PF00032 Cytochrome b(C-terminal)/b6/petD MC28_RS03805 PF07187 Protein of unknown function (DUF1405) MC28_RS03815 PF09577 Sporulation protein YpjB (SpoYpjB) MC28_RS03820 PF04298 Putative neutral zinc metallopeptidase MC28_RS03830 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 MC28_RS03830 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) MC28_RS03835 PF03819 MazG nucleotide pyrophosphohydrolase domain MC28_RS03840 PF01113 Dihydrodipicolinate reductase, N-terminus MC28_RS03840 PF05173 Dihydrodipicolinate reductase, C-terminus MC28_RS03845 PF02142 MGS-like domain MC28_RS03850 PF02585 GlcNAc-PI de-N-acetylase MC28_RS03855 PF00534 Glycosyl transferases group 1 MC28_RS03855 PF13439 Glycosyltransferase Family 4 MC28_RS03860 PF13735 tRNA nucleotidyltransferase domain 2 putative MC28_RS03860 PF01743 Poly A polymerase head domain MC28_RS03860 PF12627 Probable RNA and SrmB- binding site of polymerase A MC28_RS03865 PF02237 Biotin protein ligase C terminal domain MC28_RS03865 PF08279 HTH domain MC28_RS03865 PF03099 Biotin/lipoate A/B protein ligase family MC28_RS03875 PF02548 Ketopantoate hydroxymethyltransferase MC28_RS03880 PF02569 Pantoate-beta-alanine ligase MC28_RS03885 PF02261 Aspartate decarboxylase MC28_RS03890 PF13307 Helicase C-terminal domain MC28_RS03890 PF04851 Type III restriction enzyme, res subunit MC28_RS03890 PF00929 Exonuclease MC28_RS03895 PF14084 Protein of unknown function (DUF4264) MC28_RS03905 PF00155 Aminotransferase class I and II MC28_RS03910 PF07261 Replication initiation and membrane attachment MC28_RS03915 PF10576 Iron-sulfur binding domain of endonuclease III MC28_RS03915 PF00633 Helix-hairpin-helix motif MC28_RS03915 PF00730 HhH-GPD superfamily base excision DNA repair protein MC28_RS03925 PF00912 Transglycosylase MC28_RS03925 PF00905 Penicillin binding protein transpeptidase domain MC28_RS03930 PF03838 Recombination protein U MC28_RS03935 PF10720 Protein of unknown function (DUF2515) MC28_RS03965 PF06908 YspA SLOG family MC28_RS03970 PF05103 DivIVA protein MC28_RS03975 PF01170 Putative RNA methylase family UPF0020 MC28_RS03975 PF02926 THUMP domain MC28_RS03980 PF02899 Phage integrase, N-terminal SAM-like domain MC28_RS03980 PF00589 Phage integrase family MC28_RS04070 PF13307 Helicase C-terminal domain MC28_RS04075 PF02074 Carboxypeptidase Taq (M32) metallopeptidase MC28_RS04085 PF01636 Phosphotransferase enzyme family MC28_RS04090 PF00557 Metallopeptidase family M24 MC28_RS04095 PF00156 Phosphoribosyl transferase domain MC28_RS04100 PF00860 Permease family MC28_RS04105 PF04235 Protein of unknown function (DUF418) MC28_RS04110 PF00350 Dynamin family MC28_RS04120 PF00583 Acetyltransferase (GNAT) family MC28_RS04125 PF10752 Protein of unknown function (DUF2533) MC28_RS04130 PF00581 Rhodanese-like domain MC28_RS04140 PF07282 Putative transposase DNA-binding domain MC28_RS04140 PF01385 Probable transposase MC28_RS04140 PF12323 Helix-turn-helix domain MC28_RS04155 PF03738 Glutathionylspermidine synthase preATP-grasp MC28_RS04165 PF00689 Cation transporting ATPase, C-terminus MC28_RS04165 PF00690 Cation transporter/ATPase, N-terminus MC28_RS04170 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MC28_RS04170 PF01367 5'-3' exonuclease, C-terminal SAM fold MC28_RS04185 PF18014 Acetyltransferase (GNAT) domain MC28_RS04185 PF13673 Acetyltransferase (GNAT) domain MC28_RS04205 PF13456 Reverse transcriptase-like MC28_RS04235 PF00313 'Cold-shock' DNA-binding domain MC28_RS04240 PF08892 YqcI/YcgG family MC28_RS04245 PF01810 LysE type translocator MC28_RS04260 PF04341 Protein of unknown function, DUF485 MC28_RS04265 PF00474 Sodium:solute symporter family MC28_RS04270 PF00202 Aminotransferase class-III MC28_RS04280 PF00999 Sodium/hydrogen exchanger family MC28_RS04285 PF06445 GyrI-like small molecule binding domain MC28_RS04285 PF13411 MerR HTH family regulatory protein MC28_RS04295 PF04239 Protein of unknown function (DUF421) MC28_RS04300 PF02698 DUF218 domain MC28_RS04310 PF00881 Nitroreductase family MC28_RS04330 PF07690 Major Facilitator Superfamily MC28_RS04350 PF17209 Hfq protein MC28_RS04360 PF01618 MotA/TolQ/ExbB proton channel family MC28_RS04365 PF00691 OmpA family MC28_RS04365 PF13677 Membrane MotB of proton-channel complex MotA/MotB MC28_RS04370 PF00072 Response regulator receiver domain MC28_RS04375 PF01584 CheW-like domain MC28_RS04375 PF02895 Signal transducing histidine kinase, homodimeric domain MC28_RS04375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS04375 PF01627 Hpt domain MC28_RS04375 PF07194 P2 response regulator binding domain MC28_RS04380 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MC28_RS04380 PF04509 CheC-like family MC28_RS04395 PF01739 CheR methyltransferase, SAM binding domain MC28_RS04395 PF03705 CheR methyltransferase, all-alpha domain MC28_RS04415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MC28_RS04415 PF00460 Flagella basal body rod protein MC28_RS04420 PF00700 Bacterial flagellin C-terminal helical region MC28_RS04420 PF00669 Bacterial flagellin N-terminal helical region MC28_RS04440 PF00460 Flagella basal body rod protein MC28_RS04445 PF00460 Flagella basal body rod protein MC28_RS04445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MC28_RS04450 PF02049 Flagellar hook-basal body complex protein FliE MC28_RS04455 PF01514 Secretory protein of YscJ/FliF family MC28_RS04455 PF08345 Flagellar M-ring protein C-terminal MC28_RS04460 PF14841 FliG middle domain MC28_RS04460 PF14842 FliG N-terminal domain MC28_RS04460 PF01706 FliG C-terminal domain MC28_RS04470 PF02874 ATP synthase alpha/beta family, beta-barrel domain MC28_RS04470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MC28_RS04470 PF18269 T3SS EscN ATPase C-terminal domain MC28_RS04490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MC28_RS04490 PF07559 Flagellar basal body protein FlaE MC28_RS04490 PF00460 Flagella basal body rod protein MC28_RS04505 PF01584 CheW-like domain MC28_RS04505 PF00072 Response regulator receiver domain MC28_RS04510 PF12181 DNA binding domain of the motility gene repressor (MogR) MC28_RS04515 PF00669 Bacterial flagellin N-terminal helical region MC28_RS04515 PF00700 Bacterial flagellin C-terminal helical region MC28_RS04520 PF00669 Bacterial flagellin N-terminal helical region MC28_RS04520 PF00700 Bacterial flagellin C-terminal helical region MC28_RS04525 PF01464 Transglycosylase SLT domain MC28_RS04535 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MC28_RS04535 PF02154 Flagellar motor switch protein FliM MC28_RS04540 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MC28_RS04540 PF04509 CheC-like family MC28_RS04550 PF00813 FliP family MC28_RS04555 PF01313 Bacterial export proteins, family 3 MC28_RS04565 PF01312 FlhB HrpN YscU SpaS Family MC28_RS04570 PF00771 FHIPEP family MC28_RS04575 PF00448 SRP54-type protein, GTPase domain MC28_RS04580 PF00460 Flagella basal body rod protein MC28_RS04580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MC28_RS04585 PF00296 Luciferase-like monooxygenase MC28_RS04620 PF03992 Antibiotic biosynthesis monooxygenase MC28_RS04625 PF08141 Small acid-soluble spore protein H family MC28_RS04635 PF07690 Major Facilitator Superfamily MC28_RS04645 PF03466 LysR substrate binding domain MC28_RS04645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC28_RS04650 PF00005 ABC transporter MC28_RS04650 PF08402 TOBE domain MC28_RS04660 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS04665 PF00753 Metallo-beta-lactamase superfamily MC28_RS04665 PF12706 Beta-lactamase superfamily domain MC28_RS04675 PF10787 Uncharacterised protein from bacillus cereus group MC28_RS04695 PF00300 Histidine phosphatase superfamily (branch 1) MC28_RS04705 PF00561 alpha/beta hydrolase fold MC28_RS04715 PF01047 MarR family MC28_RS04725 PF13537 Glutamine amidotransferase domain MC28_RS04725 PF00733 Asparagine synthase MC28_RS04745 PF01545 Cation efflux family MC28_RS04745 PF16916 Dimerisation domain of Zinc Transporter MC28_RS04755 PF07729 FCD domain MC28_RS04755 PF00392 Bacterial regulatory proteins, gntR family MC28_RS04760 PF00892 EamA-like transporter family MC28_RS04770 PF02492 CobW/HypB/UreG, nucleotide-binding domain MC28_RS04770 PF07683 Cobalamin synthesis protein cobW C-terminal domain MC28_RS04775 PF03773 Predicted permease MC28_RS04785 PF00535 Glycosyl transferase family 2 MC28_RS04790 PF03553 Na+/H+ antiporter family MC28_RS04795 PF13411 MerR HTH family regulatory protein MC28_RS04800 PF00106 short chain dehydrogenase MC28_RS04805 PF00206 Lyase MC28_RS04805 PF10415 Fumarase C C-terminus MC28_RS04820 PF01554 MatE MC28_RS04825 PF03575 Peptidase family S51 MC28_RS04845 PF02683 Cytochrome C biogenesis protein transmembrane region MC28_RS04850 PF00578 AhpC/TSA family MC28_RS04865 PF00291 Pyridoxal-phosphate dependent enzyme MC28_RS04870 PF04286 Protein of unknown function (DUF445) MC28_RS04895 PF00072 Response regulator receiver domain MC28_RS04895 PF00196 Bacterial regulatory proteins, luxR family MC28_RS04905 PF00005 ABC transporter MC28_RS04920 PF13091 PLD-like domain MC28_RS04925 PF00696 Amino acid kinase family MC28_RS04930 PF00375 Sodium:dicarboxylate symporter family MC28_RS04935 PF10415 Fumarase C C-terminus MC28_RS04935 PF00206 Lyase MC28_RS04940 PF00390 Malic enzyme, N-terminal domain MC28_RS04940 PF03949 Malic enzyme, NAD binding domain MC28_RS04945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS04950 PF00072 Response regulator receiver domain MC28_RS04950 PF08664 YcbB domain MC28_RS04955 PF01047 MarR family MC28_RS04960 PF07690 Major Facilitator Superfamily MC28_RS04965 PF00176 SNF2 family N-terminal domain MC28_RS04965 PF00271 Helicase conserved C-terminal domain MC28_RS04965 PF12419 SNF2 Helicase protein MC28_RS04975 PF03590 Aspartate-ammonia ligase MC28_RS04980 PF01381 Helix-turn-helix MC28_RS04985 PF00696 Amino acid kinase family MC28_RS04985 PF13840 ACT domain MC28_RS04995 PF13761 Domain of unknown function (DUF4166) MC28_RS05000 PF14158 YndJ-like protein MC28_RS05005 PF09297 NADH pyrophosphatase zinc ribbon domain MC28_RS05005 PF00293 NUDIX domain MC28_RS05030 PF03976 Polyphosphate kinase 2 (PPK2) MC28_RS05035 PF07690 Major Facilitator Superfamily MC28_RS05040 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MC28_RS05040 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MC28_RS05050 PF13167 GTP-binding GTPase N-terminal MC28_RS05050 PF01926 50S ribosome-binding GTPase MC28_RS05050 PF16360 GTP-binding GTPase Middle Region MC28_RS05055 PF07690 Major Facilitator Superfamily MC28_RS05060 PF00291 Pyridoxal-phosphate dependent enzyme MC28_RS05075 PF01943 Polysaccharide biosynthesis protein MC28_RS05075 PF14667 Polysaccharide biosynthesis C-terminal domain MC28_RS05080 PF00209 Sodium:neurotransmitter symporter family MC28_RS05085 PF03422 Carbohydrate binding module (family 6) MC28_RS05085 PF00457 Glycosyl hydrolases family 11 MC28_RS05085 PF01522 Polysaccharide deacetylase MC28_RS05095 PF04239 Protein of unknown function (DUF421) MC28_RS05110 PF01625 Peptide methionine sulfoxide reductase MC28_RS05120 PF01063 Amino-transferase class IV MC28_RS05125 PF00205 Thiamine pyrophosphate enzyme, central domain MC28_RS05125 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MC28_RS05125 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MC28_RS05135 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MC28_RS05135 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MC28_RS05140 PF00920 Dehydratase family MC28_RS05145 PF00291 Pyridoxal-phosphate dependent enzyme MC28_RS05145 PF00585 C-terminal regulatory domain of Threonine dehydratase MC28_RS05150 PF09587 Bacterial capsule synthesis protein PGA_cap MC28_RS05165 PF07690 Major Facilitator Superfamily MC28_RS05170 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase MC28_RS05180 PF01048 Phosphorylase superfamily MC28_RS05195 PF01979 Amidohydrolase family MC28_RS05200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC28_RS05210 PF04055 Radical SAM superfamily MC28_RS05210 PF13186 Iron-sulfur cluster-binding domain MC28_RS05215 PF13302 Acetyltransferase (GNAT) domain MC28_RS05220 PF00072 Response regulator receiver domain MC28_RS05220 PF00486 Transcriptional regulatory protein, C terminal MC28_RS05225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS05225 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS05235 PF01566 Natural resistance-associated macrophage protein MC28_RS05240 PF00581 Rhodanese-like domain MC28_RS05240 PF12368 Rhodanase C-terminal MC28_RS05240 PF17773 UPF0176 acylphosphatase like domain MC28_RS05250 PF02558 Ketopantoate reductase PanE/ApbA MC28_RS05250 PF08546 Ketopantoate reductase PanE/ApbA C terminal MC28_RS05260 PF13520 Amino acid permease MC28_RS05270 PF05791 Bacillus haemolytic enterotoxin (HBL) MC28_RS05275 PF05791 Bacillus haemolytic enterotoxin (HBL) MC28_RS05280 PF01810 LysE type translocator MC28_RS05285 PF04198 Putative sugar-binding domain MC28_RS05290 PF01791 DeoC/LacD family aldolase MC28_RS05295 PF07662 Na+ dependent nucleoside transporter C-terminus MC28_RS05295 PF01773 Na+ dependent nucleoside transporter N-terminus MC28_RS05300 PF00591 Glycosyl transferase family, a/b domain MC28_RS05300 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain MC28_RS05300 PF02885 Glycosyl transferase family, helical bundle domain MC28_RS05305 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MC28_RS05320 PF05979 Bacterial protein of unknown function (DUF896) MC28_RS05335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC28_RS05335 PF03466 LysR substrate binding domain MC28_RS05350 PF05195 Aminopeptidase P, N-terminal domain MC28_RS05350 PF00557 Metallopeptidase family M24 MC28_RS05355 PF07731 Multicopper oxidase MC28_RS05355 PF07732 Multicopper oxidase MC28_RS05355 PF00394 Multicopper oxidase MC28_RS05360 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MC28_RS05360 PF08239 Bacterial SH3 domain MC28_RS05360 PF05036 Sporulation related domain MC28_RS05365 PF13026 Protein of unknown function (DUF3887) MC28_RS05365 PF12146 Serine aminopeptidase, S33 MC28_RS05400 PF01842 ACT domain MC28_RS05400 PF03315 Serine dehydratase beta chain MC28_RS05405 PF03313 Serine dehydratase alpha chain MC28_RS05420 PF00005 ABC transporter MC28_RS05425 PF02687 FtsX-like permease family MC28_RS05430 PF00072 Response regulator receiver domain MC28_RS05430 PF00486 Transcriptional regulatory protein, C terminal MC28_RS05435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS05450 PF00882 Zinc dependent phospholipase C MC28_RS05460 PF01098 Cell cycle protein MC28_RS05465 PF03448 MgtE intracellular N domain MC28_RS05465 PF00571 CBS domain MC28_RS05465 PF01769 Divalent cation transporter MC28_RS05475 PF16916 Dimerisation domain of Zinc Transporter MC28_RS05475 PF01545 Cation efflux family MC28_RS05490 PF00144 Beta-lactamase MC28_RS05495 PF12146 Serine aminopeptidase, S33 MC28_RS05495 PF13026 Protein of unknown function (DUF3887) MC28_RS05500 PF00196 Bacterial regulatory proteins, luxR family MC28_RS05500 PF00072 Response regulator receiver domain MC28_RS05520 PF01751 Toprim domain MC28_RS05520 PF01396 Topoisomerase DNA binding C4 zinc finger MC28_RS05520 PF13342 C-terminal repeat of topoisomerase MC28_RS05520 PF01131 DNA topoisomerase MC28_RS05530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC28_RS05530 PF03466 LysR substrate binding domain MC28_RS05545 PF02525 Flavodoxin-like fold MC28_RS05550 PF05525 Branched-chain amino acid transport protein MC28_RS05560 PF05425 Copper resistance protein D MC28_RS05560 PF04234 CopC domain MC28_RS05560 PF13115 YtkA-like MC28_RS05565 PF07987 Domain of unkown function (DUF1775) MC28_RS05570 PF00892 EamA-like transporter family MC28_RS05575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC28_RS05575 PF03466 LysR substrate binding domain MC28_RS05580 PF02082 Transcriptional regulator MC28_RS05585 PF01323 DSBA-like thioredoxin domain MC28_RS05590 PF00881 Nitroreductase family MC28_RS05600 PF01425 Amidase MC28_RS05605 PF01594 AI-2E family transporter MC28_RS05615 PF00056 lactate/malate dehydrogenase, NAD binding domain MC28_RS05615 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MC28_RS05620 PF01593 Flavin containing amine oxidoreductase MC28_RS05625 PF02492 CobW/HypB/UreG, nucleotide-binding domain MC28_RS05625 PF07683 Cobalamin synthesis protein cobW C-terminal domain MC28_RS05635 PF12399 Branched-chain amino acid ATP-binding cassette transporter MC28_RS05635 PF00005 ABC transporter MC28_RS05640 PF00005 ABC transporter MC28_RS05645 PF02653 Branched-chain amino acid transport system / permease component MC28_RS05655 PF03466 LysR substrate binding domain MC28_RS05655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC28_RS05675 PF01047 MarR family MC28_RS05685 PF01654 Cytochrome bd terminal oxidase subunit I MC28_RS05690 PF02322 Cytochrome bd terminal oxidase subunit II MC28_RS05695 PF00005 ABC transporter MC28_RS05695 PF00664 ABC transporter transmembrane region MC28_RS05700 PF00664 ABC transporter transmembrane region MC28_RS05700 PF00005 ABC transporter MC28_RS05705 PF00535 Glycosyl transferase family 2 MC28_RS05720 PF17676 LD-carboxypeptidase C-terminal domain MC28_RS05720 PF02016 LD-carboxypeptidase N-terminal domain MC28_RS05725 PF00768 D-alanyl-D-alanine carboxypeptidase MC28_RS05725 PF07943 Penicillin-binding protein 5, C-terminal domain MC28_RS05740 PF01476 LysM domain MC28_RS05740 PF00877 NlpC/P60 family MC28_RS05750 PF00005 ABC transporter MC28_RS05750 PF00664 ABC transporter transmembrane region MC28_RS05755 PF00486 Transcriptional regulatory protein, C terminal MC28_RS05755 PF00072 Response regulator receiver domain MC28_RS05760 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS05760 PF00989 PAS fold MC28_RS05760 PF16736 Single Cache-like MC28_RS05760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS05770 PF00106 short chain dehydrogenase MC28_RS05780 PF04439 Streptomycin adenylyltransferase MC28_RS05785 PF01522 Polysaccharide deacetylase MC28_RS05790 PF13630 SdpI/YhfL protein family MC28_RS05805 PF03447 Homoserine dehydrogenase, NAD binding domain MC28_RS05805 PF00742 Homoserine dehydrogenase MC28_RS05805 PF01842 ACT domain MC28_RS05810 PF00291 Pyridoxal-phosphate dependent enzyme MC28_RS05815 PF00288 GHMP kinases N terminal domain MC28_RS05815 PF08544 GHMP kinases C terminal MC28_RS05830 PF03816 Cell envelope-related transcriptional attenuator domain MC28_RS05840 PF00072 Response regulator receiver domain MC28_RS05840 PF00486 Transcriptional regulatory protein, C terminal MC28_RS05845 PF16736 Single Cache-like MC28_RS05845 PF00989 PAS fold MC28_RS05845 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS05845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS05850 PF01522 Polysaccharide deacetylase MC28_RS05860 PF02308 MgtC family MC28_RS05865 PF00583 Acetyltransferase (GNAT) family MC28_RS05870 PF04183 IucA / IucC family MC28_RS05870 PF06276 Ferric iron reductase FhuF-like transporter MC28_RS05875 PF04183 IucA / IucC family MC28_RS05875 PF06276 Ferric iron reductase FhuF-like transporter MC28_RS05880 PF13193 AMP-binding enzyme C-terminal domain MC28_RS05880 PF00501 AMP-binding enzyme MC28_RS05895 PF01261 Xylose isomerase-like TIM barrel MC28_RS05900 PF00269 Small, acid-soluble spore proteins, alpha/beta type MC28_RS05905 PF07690 Major Facilitator Superfamily MC28_RS05910 PF01810 LysE type translocator MC28_RS05915 PF00392 Bacterial regulatory proteins, gntR family MC28_RS05915 PF00155 Aminotransferase class I and II MC28_RS05925 PF01734 Patatin-like phospholipase MC28_RS05950 PF13344 Haloacid dehalogenase-like hydrolase MC28_RS05950 PF00293 NUDIX domain MC28_RS05955 PF02540 NAD synthase MC28_RS06015 PF04860 Phage portal protein MC28_RS06050 PF02687 FtsX-like permease family MC28_RS06055 PF18277 AbrB C-terminal domain MC28_RS06055 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin MC28_RS06060 PF00082 Subtilase family MC28_RS06065 PF01022 Bacterial regulatory protein, arsR family MC28_RS06070 PF00248 Aldo/keto reductase family MC28_RS06090 PF03193 RsgA GTPase MC28_RS06095 PF02743 Cache domain MC28_RS06095 PF00672 HAMP domain MC28_RS06095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC28_RS06115 PF00210 Ferritin-like domain MC28_RS06130 PF00296 Luciferase-like monooxygenase MC28_RS06140 PF01593 Flavin containing amine oxidoreductase MC28_RS06145 PF13302 Acetyltransferase (GNAT) domain MC28_RS06150 PF00248 Aldo/keto reductase family MC28_RS06155 PF02492 CobW/HypB/UreG, nucleotide-binding domain MC28_RS06155 PF07683 Cobalamin synthesis protein cobW C-terminal domain MC28_RS06165 PF01297 Zinc-uptake complex component A periplasmic MC28_RS06170 PF13460 NAD(P)H-binding MC28_RS06175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MC28_RS06180 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MC28_RS06180 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MC28_RS06190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC28_RS06195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC28_RS06205 PF00300 Histidine phosphatase superfamily (branch 1) MC28_RS06215 PF08757 CotH kinase protein MC28_RS06220 PF00293 NUDIX domain MC28_RS06225 PF09335 SNARE associated Golgi protein MC28_RS06230 PF14667 Polysaccharide biosynthesis C-terminal domain MC28_RS06230 PF01943 Polysaccharide biosynthesis protein MC28_RS06240 PF03773 Predicted permease MC28_RS06245 PF09323 Domain of unknown function (DUF1980) MC28_RS06250 PF03061 Thioesterase superfamily MC28_RS06255 PF13091 PLD-like domain MC28_RS06270 PF13460 NAD(P)H-binding MC28_RS06275 PF04306 Protein of unknown function (DUF456) MC28_RS06280 PF00571 CBS domain MC28_RS06280 PF03471 Transporter associated domain MC28_RS06280 PF01595 Cyclin M transmembrane N-terminal domain MC28_RS06305 PF05525 Branched-chain amino acid transport protein MC28_RS06310 PF01588 Putative tRNA binding domain MC28_RS06325 PF07454 Stage II sporulation protein P (SpoIIP) MC28_RS06335 PF02557 D-alanyl-D-alanine carboxypeptidase MC28_RS06345 PF01425 Amidase MC28_RS06350 PF07690 Major Facilitator Superfamily MC28_RS06360 PF01145 SPFH domain / Band 7 family MC28_RS06365 PF07454 Stage II sporulation protein P (SpoIIP) MC28_RS06380 PF01047 MarR family MC28_RS06385 PF07690 Major Facilitator Superfamily MC28_RS06395 PF01168 Alanine racemase, N-terminal domain MC28_RS06395 PF00842 Alanine racemase, C-terminal domain MC28_RS06410 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase MC28_RS06415 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 MC28_RS06415 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) MC28_RS06420 PF00392 Bacterial regulatory proteins, gntR family MC28_RS06420 PF00155 Aminotransferase class I and II MC28_RS06450 PF00583 Acetyltransferase (GNAT) family MC28_RS06465 PF06013 Proteins of 100 residues with WXG MC28_RS06480 PF08817 WXG100 protein secretion system (Wss), protein YukD MC28_RS06485 PF10140 WXG100 protein secretion system (Wss), protein YukC MC28_RS06490 PF12538 DNA transporter MC28_RS06490 PF01580 FtsK/SpoIIIE family MC28_RS06530 PF09579 Sporulation protein YtfJ (Spore_YtfJ) MC28_RS06555 PF08241 Methyltransferase domain MC28_RS06560 PF01268 Formate--tetrahydrofolate ligase MC28_RS06570 PF00270 DEAD/DEAH box helicase MC28_RS06570 PF00271 Helicase conserved C-terminal domain MC28_RS06575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC28_RS06585 PF08240 Alcohol dehydrogenase GroES-like domain MC28_RS06585 PF00107 Zinc-binding dehydrogenase MC28_RS06610 PF01613 Flavin reductase like domain MC28_RS06610 PF00258 Flavodoxin MC28_RS06620 PF00255 Glutathione peroxidase MC28_RS06625 PF13559 Domain of unknown function (DUF4129) MC28_RS06625 PF01841 Transglutaminase-like superfamily MC28_RS06625 PF11992 Domain of unknown function (DUF3488) MC28_RS06630 PF01882 Protein of unknown function DUF58 MC28_RS06635 PF07726 ATPase family associated with various cellular activities (AAA) MC28_RS06635 PF17863 AAA lid domain MC28_RS06640 PF14710 Respiratory nitrate reductase alpha N-terminal MC28_RS06640 PF01568 Molydopterin dinucleotide binding domain MC28_RS06640 PF00384 Molybdopterin oxidoreductase MC28_RS06645 PF14711 Respiratory nitrate reductase beta C-terminal MC28_RS06645 PF13247 4Fe-4S dicluster domain MC28_RS06650 PF02613 Nitrate reductase delta subunit MC28_RS06655 PF02665 Nitrate reductase gamma subunit MC28_RS06660 PF00325 Bacterial regulatory proteins, crp family MC28_RS06660 PF00027 Cyclic nucleotide-binding domain MC28_RS06665 PF06463 Molybdenum Cofactor Synthesis C MC28_RS06665 PF04055 Radical SAM superfamily MC28_RS06670 PF00899 ThiF family MC28_RS06675 PF00994 Probable molybdopterin binding domain MC28_RS06675 PF03454 MoeA C-terminal region (domain IV) MC28_RS06675 PF03453 MoeA N-terminal region (domain I and II) MC28_RS06680 PF02391 MoaE protein MC28_RS06690 PF07690 Major Facilitator Superfamily MC28_RS06705 PF01903 CbiX MC28_RS06710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MC28_RS06715 PF00355 Rieske [2Fe-2S] domain MC28_RS06720 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MC28_RS06720 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC28_RS06720 PF04324 BFD-like [2Fe-2S] binding domain MC28_RS06720 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MC28_RS06720 PF18267 Rubredoxin NAD+ reductase C-terminal domain MC28_RS06725 PF01814 Hemerythrin HHE cation binding domain MC28_RS06725 PF04405 Domain of Unknown function (DUF542) MC28_RS06755 PF13302 Acetyltransferase (GNAT) domain MC28_RS06800 PF04232 Stage V sporulation protein S (SpoVS) MC28_RS06815 PF01966 HD domain MC28_RS06820 PF00005 ABC transporter MC28_RS06820 PF12848 ABC transporter MC28_RS06820 PF16326 ABC transporter C-terminal domain MC28_RS06835 PF00436 Single-strand binding protein family MC28_RS06850 PF13769 Virulence factor MC28_RS06850 PF08712 Scaffold protein Nfu/NifU N terminal MC28_RS06860 PF06491 Disulphide isomerase MC28_RS06865 PF04445 Putative SAM-dependent methyltransferase MC28_RS06870 PF00750 tRNA synthetases class I (R) MC28_RS06870 PF03485 Arginyl tRNA synthetase N terminal domain MC28_RS06870 PF05746 DALR anticodon binding domain MC28_RS06895 PF08264 Anticodon-binding domain of tRNA MC28_RS06895 PF00133 tRNA synthetases class I (I, L, M and V) MC28_RS06905 PF00440 Bacterial regulatory proteins, tetR family MC28_RS06920 PF01336 OB-fold nucleic acid binding domain MC28_RS06920 PF00152 tRNA synthetases class II (D, K and N) MC28_RS06925 PF00209 Sodium:neurotransmitter symporter family MC28_RS06930 PF00561 alpha/beta hydrolase fold MC28_RS06940 PF10997 Alternate to MurJ MC28_RS06945 PF13419 Haloacid dehalogenase-like hydrolase MC28_RS06955 PF00465 Iron-containing alcohol dehydrogenase MC28_RS06960 PF01177 Asp/Glu/Hydantoin racemase MC28_RS06965 PF01980 tRNA-methyltransferase O MC28_RS06970 PF00583 Acetyltransferase (GNAT) family MC28_RS06975 PF08645 Polynucleotide kinase 3 phosphatase MC28_RS06985 PF14005 YpjP-like protein MC28_RS06990 PF13419 Haloacid dehalogenase-like hydrolase MC28_RS07005 PF00144 Beta-lactamase MC28_RS07005 PF07930 D-aminopeptidase, domain B MC28_RS07010 PF00303 Thymidylate synthase MC28_RS07015 PF00186 Dihydrofolate reductase MC28_RS07020 PF00905 Penicillin binding protein transpeptidase domain MC28_RS07020 PF05223 NTF2-like N-terminal transpeptidase domain MC28_RS07020 PF03717 Penicillin-binding Protein dimerisation domain MC28_RS07025 PF02525 Flavodoxin-like fold MC28_RS07030 PF01553 Acyltransferase MC28_RS07035 PF03006 Haemolysin-III related MC28_RS07040 PF02416 mttA/Hcf106 family MC28_RS07045 PF00902 Sec-independent protein translocase protein (TatC) MC28_RS07055 PF02645 Uncharacterised protein, DegV family COG1307 MC28_RS07065 PF02630 SCO1/SenC MC28_RS07070 PF00011 Hsp20/alpha crystallin family MC28_RS07075 PF00733 Asparagine synthase MC28_RS07075 PF13537 Glutamine amidotransferase domain MC28_RS07090 PF01520 N-acetylmuramoyl-L-alanine amidase MC28_RS07090 PF05036 Sporulation related domain MC28_RS07095 PF01497 Periplasmic binding protein MC28_RS07100 PF01063 Amino-transferase class IV MC28_RS07105 PF00881 Nitroreductase family MC28_RS07115 PF00857 Isochorismatase family MC28_RS07120 PF00293 NUDIX domain MC28_RS07125 PF00924 Mechanosensitive ion channel MC28_RS07130 PF13185 GAF domain MC28_RS07130 PF07730 Histidine kinase MC28_RS07135 PF00072 Response regulator receiver domain MC28_RS07135 PF00196 Bacterial regulatory proteins, luxR family MC28_RS07140 PF01418 Helix-turn-helix domain, rpiR family MC28_RS07140 PF01380 SIS domain MC28_RS07145 PF08240 Alcohol dehydrogenase GroES-like domain MC28_RS07145 PF00107 Zinc-binding dehydrogenase MC28_RS07160 PF00144 Beta-lactamase MC28_RS07170 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain MC28_RS07170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MC28_RS07185 PF03358 NADPH-dependent FMN reductase MC28_RS07200 PF00571 CBS domain MC28_RS07200 PF00005 ABC transporter MC28_RS07205 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS07210 PF13520 Amino acid permease MC28_RS07240 PF01595 Cyclin M transmembrane N-terminal domain MC28_RS07240 PF00571 CBS domain MC28_RS07240 PF03471 Transporter associated domain MC28_RS07245 PF00171 Aldehyde dehydrogenase family MC28_RS07250 PF07997 Protein of unknown function (DUF1694) MC28_RS07255 PF09385 Histidine kinase N terminal MC28_RS07265 PF00202 Aminotransferase class-III MC28_RS07270 PF01144 Coenzyme A transferase MC28_RS07275 PF01144 Coenzyme A transferase MC28_RS07280 PF01546 Peptidase family M20/M25/M40 MC28_RS07280 PF07687 Peptidase dimerisation domain MC28_RS07285 PF00583 Acetyltransferase (GNAT) family MC28_RS07290 PF13426 PAS domain MC28_RS07290 PF02954 Bacterial regulatory protein, Fis family MC28_RS07290 PF00158 Sigma-54 interaction domain MC28_RS07295 PF12544 Lysine-2,3-aminomutase MC28_RS07300 PF14122 YokU-like protein, putative antitoxin MC28_RS07305 PF06855 YozE SAM-like fold MC28_RS07315 PF14162 YozD-like protein MC28_RS07325 PF00069 Protein kinase domain MC28_RS07325 PF08239 Bacterial SH3 domain MC28_RS07335 PF01569 PAP2 superfamily MC28_RS07340 PF01545 Cation efflux family MC28_RS07340 PF16916 Dimerisation domain of Zinc Transporter MC28_RS07345 PF00085 Thioredoxin MC28_RS07350 PF00589 Phage integrase family MC28_RS07350 PF14659 Phage integrase, N-terminal SAM-like domain MC28_RS07355 PF13614 AAA domain MC28_RS07385 PF01381 Helix-turn-helix MC28_RS07410 PF09588 YqaJ-like viral recombinase domain MC28_RS07415 PF03837 RecT family MC28_RS07570 PF01510 N-acetylmuramoyl-L-alanine amidase MC28_RS07570 PF13457 GW (Gly-Tryp) dipeptide domain MC28_RS07670 PF10676 Spore germination protein gerPA/gerPF MC28_RS07705 PF00912 Transglycosylase MC28_RS07705 PF00905 Penicillin binding protein transpeptidase domain MC28_RS07715 PF07690 Major Facilitator Superfamily MC28_RS07725 PF00285 Citrate synthase, C-terminal domain MC28_RS07730 PF03972 MmgE/PrpD family MC28_RS07740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MC28_RS07740 PF02770 Acyl-CoA dehydrogenase, middle domain MC28_RS07740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MC28_RS07745 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MC28_RS07745 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MC28_RS07750 PF00171 Aldehyde dehydrogenase family MC28_RS07755 PF01810 LysE type translocator MC28_RS07760 PF00378 Enoyl-CoA hydratase/isomerase MC28_RS07770 PF10763 Protein of unknown function (DUF2584) MC28_RS07775 PF00149 Calcineurin-like phosphoesterase MC28_RS07775 PF12320 Type 5 capsule protein repressor C-terminal domain MC28_RS07780 PF13476 AAA domain MC28_RS07790 PF01022 Bacterial regulatory protein, arsR family MC28_RS07805 PF07690 Major Facilitator Superfamily MC28_RS07810 PF00106 short chain dehydrogenase MC28_RS07815 PF00425 chorismate binding enzyme MC28_RS07820 PF13193 AMP-binding enzyme C-terminal domain MC28_RS07820 PF00501 AMP-binding enzyme MC28_RS07825 PF00857 Isochorismatase family MC28_RS07825 PF00550 Phosphopantetheine attachment site MC28_RS07830 PF13193 AMP-binding enzyme C-terminal domain MC28_RS07830 PF00975 Thioesterase domain MC28_RS07830 PF00501 AMP-binding enzyme MC28_RS07830 PF00550 Phosphopantetheine attachment site MC28_RS07830 PF00668 Condensation domain MC28_RS07835 PF03621 MbtH-like protein MC28_RS07840 PF07690 Major Facilitator Superfamily MC28_RS07855 PF00216 Bacterial DNA-binding protein MC28_RS07865 PF05163 DinB family MC28_RS07870 PF00082 Subtilase family MC28_RS07875 PF01235 Sodium:alanine symporter family MC28_RS07885 PF16291 Domain of unknown function (DUF4937 MC28_RS07890 PF01479 S4 domain MC28_RS07890 PF00849 RNA pseudouridylate synthase MC28_RS07895 PF03129 Anticodon binding domain MC28_RS07895 PF02824 TGS domain MC28_RS07895 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MC28_RS07895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MC28_RS07900 PF00005 ABC transporter MC28_RS07910 PF12146 Serine aminopeptidase, S33 MC28_RS07925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MC28_RS07925 PF00205 Thiamine pyrophosphate enzyme, central domain MC28_RS07925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MC28_RS07935 PF00753 Metallo-beta-lactamase superfamily MC28_RS07960 PF00027 Cyclic nucleotide-binding domain MC28_RS07970 PF12833 Helix-turn-helix domain MC28_RS07970 PF17853 GGDEF-like domain MC28_RS07985 PF05791 Bacillus haemolytic enterotoxin (HBL) MC28_RS07990 PF05791 Bacillus haemolytic enterotoxin (HBL) MC28_RS08005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS08005 PF13426 PAS domain MC28_RS08005 PF13188 PAS domain MC28_RS08005 PF00989 PAS fold MC28_RS08005 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS08015 PF00486 Transcriptional regulatory protein, C terminal MC28_RS08015 PF00072 Response regulator receiver domain MC28_RS08020 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS08020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS08035 PF01047 MarR family MC28_RS08050 PF00440 Bacterial regulatory proteins, tetR family MC28_RS08055 PF03176 MMPL family MC28_RS08060 PF00302 Chloramphenicol acetyltransferase MC28_RS08070 PF00583 Acetyltransferase (GNAT) family MC28_RS08095 PF01593 Flavin containing amine oxidoreductase MC28_RS08105 PF13302 Acetyltransferase (GNAT) domain MC28_RS08115 PF00313 'Cold-shock' DNA-binding domain MC28_RS08135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC28_RS08135 PF03466 LysR substrate binding domain MC28_RS08140 PF02774 Semialdehyde dehydrogenase, dimerisation domain MC28_RS08140 PF01118 Semialdehyde dehydrogenase, NAD binding domain MC28_RS08145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC28_RS08145 PF03466 LysR substrate binding domain MC28_RS08150 PF00202 Aminotransferase class-III MC28_RS08155 PF03475 3-alpha domain MC28_RS08155 PF03473 MOSC domain MC28_RS08170 PF00664 ABC transporter transmembrane region MC28_RS08170 PF00005 ABC transporter MC28_RS08175 PF00005 ABC transporter MC28_RS08175 PF00664 ABC transporter transmembrane region MC28_RS08185 PF01810 LysE type translocator MC28_RS08190 PF01381 Helix-turn-helix MC28_RS08190 PF07883 Cupin domain MC28_RS08225 PF00890 FAD binding domain MC28_RS08230 PF04542 Sigma-70 region 2 MC28_RS08230 PF08281 Sigma-70, region 4 MC28_RS08230 PF12680 SnoaL-like domain MC28_RS08240 PF01596 O-methyltransferase MC28_RS08255 PF02638 Glycosyl hydrolase-like 10 MC28_RS08265 PF02378 Phosphotransferase system, EIIC MC28_RS08275 PF03702 Anhydro-N-acetylmuramic acid kinase MC28_RS08280 PF01869 BadF/BadG/BcrA/BcrD ATPase family MC28_RS08285 PF02660 Glycerol-3-phosphate acyltransferase MC28_RS08290 PF00266 Aminotransferase class-V MC28_RS08305 PF00753 Metallo-beta-lactamase superfamily MC28_RS08305 PF16123 Hydroxyacylglutathione hydrolase C-terminus MC28_RS08320 PF00270 DEAD/DEAH box helicase MC28_RS08320 PF00271 Helicase conserved C-terminal domain MC28_RS08325 PF03848 Tellurite resistance protein TehB MC28_RS08325 PF09313 Domain of unknown function (DUF1971) MC28_RS08335 PF08241 Methyltransferase domain MC28_RS08340 PF00205 Thiamine pyrophosphate enzyme, central domain MC28_RS08340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MC28_RS08340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MC28_RS08350 PF00300 Histidine phosphatase superfamily (branch 1) MC28_RS08355 PF14171 Toxin SpoIISA, type II toxin-antitoxin system MC28_RS08390 PF04371 Porphyromonas-type peptidyl-arginine deiminase MC28_RS08395 PF00196 Bacterial regulatory proteins, luxR family MC28_RS08405 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin MC28_RS08405 PF18277 AbrB C-terminal domain MC28_RS08415 PF01925 Sulfite exporter TauE/SafE MC28_RS08420 PF00132 Bacterial transferase hexapeptide (six repeats) MC28_RS08425 PF00768 D-alanyl-D-alanine carboxypeptidase MC28_RS08425 PF07943 Penicillin-binding protein 5, C-terminal domain MC28_RS08440 PF00905 Penicillin binding protein transpeptidase domain MC28_RS08440 PF03717 Penicillin-binding Protein dimerisation domain MC28_RS08440 PF05223 NTF2-like N-terminal transpeptidase domain MC28_RS08445 PF04542 Sigma-70 region 2 MC28_RS08445 PF08281 Sigma-70, region 4 MC28_RS08455 PF00905 Penicillin binding protein transpeptidase domain MC28_RS08455 PF03717 Penicillin-binding Protein dimerisation domain MC28_RS08460 PF03717 Penicillin-binding Protein dimerisation domain MC28_RS08460 PF00905 Penicillin binding protein transpeptidase domain MC28_RS08480 PF05791 Bacillus haemolytic enterotoxin (HBL) MC28_RS08500 PF03323 Bacillus/Clostridium GerA spore germination protein MC28_RS08510 PF18416 N-acetylglucosamine binding protein domain 2 MC28_RS08510 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading MC28_RS08515 PF00388 Phosphatidylinositol-specific phospholipase C, X domain MC28_RS08525 PF00149 Calcineurin-like phosphoesterase MC28_RS08535 PF00005 ABC transporter MC28_RS08545 PF00440 Bacterial regulatory proteins, tetR family MC28_RS08545 PF08359 YsiA-like protein, C-terminal region MC28_RS08555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MC28_RS08555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MC28_RS08555 PF02770 Acyl-CoA dehydrogenase, middle domain MC28_RS08560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MC28_RS08560 PF00289 Biotin carboxylase, N-terminal domain MC28_RS08560 PF02785 Biotin carboxylase C-terminal domain MC28_RS08565 PF00364 Biotin-requiring enzyme MC28_RS08570 PF00682 HMGL-like MC28_RS08575 PF00378 Enoyl-CoA hydratase/isomerase MC28_RS08580 PF01039 Carboxyl transferase domain MC28_RS08585 PF00501 AMP-binding enzyme MC28_RS08585 PF13193 AMP-binding enzyme C-terminal domain MC28_RS08585 PF16177 Acetyl-coenzyme A synthetase N-terminus MC28_RS08630 PF00485 Phosphoribulokinase / Uridine kinase family MC28_RS08640 PF05163 DinB family MC28_RS08645 PF00768 D-alanyl-D-alanine carboxypeptidase MC28_RS08645 PF07943 Penicillin-binding protein 5, C-terminal domain MC28_RS08650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS08650 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS08655 PF00072 Response regulator receiver domain MC28_RS08655 PF00486 Transcriptional regulatory protein, C terminal MC28_RS08665 PF13021 Domain of unknown function (DUF3885) MC28_RS08670 PF01048 Phosphorylase superfamily MC28_RS08690 PF01447 Thermolysin metallopeptidase, catalytic domain MC28_RS08690 PF03413 Peptidase propeptide and YPEB domain MC28_RS08690 PF07504 Fungalysin/Thermolysin Propeptide Motif MC28_RS08690 PF02868 Thermolysin metallopeptidase, alpha-helical domain MC28_RS08695 PF17853 GGDEF-like domain MC28_RS08695 PF12833 Helix-turn-helix domain MC28_RS08725 PF17760 UvrA interaction domain MC28_RS08725 PF17755 UvrA DNA-binding domain MC28_RS08725 PF00005 ABC transporter MC28_RS08740 PF00144 Beta-lactamase MC28_RS08745 PF00376 MerR family regulatory protein MC28_RS08745 PF09278 MerR, DNA binding MC28_RS08755 PF01638 HxlR-like helix-turn-helix MC28_RS08760 PF13847 Methyltransferase domain MC28_RS08780 PF12833 Helix-turn-helix domain MC28_RS08780 PF14525 AraC-binding-like domain MC28_RS08790 PF00892 EamA-like transporter family MC28_RS08795 PF00155 Aminotransferase class I and II MC28_RS08795 PF00392 Bacterial regulatory proteins, gntR family MC28_RS08820 PF04239 Protein of unknown function (DUF421) MC28_RS08830 PF01965 DJ-1/PfpI family MC28_RS08840 PF08450 SMP-30/Gluconolactonase/LRE-like region MC28_RS08845 PF01921 tRNA synthetases class I (K) MC28_RS08850 PF07486 Cell Wall Hydrolase MC28_RS08860 PF00486 Transcriptional regulatory protein, C terminal MC28_RS08860 PF00072 Response regulator receiver domain MC28_RS08865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS08875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC28_RS08875 PF03466 LysR substrate binding domain MC28_RS08880 PF00248 Aldo/keto reductase family MC28_RS08885 PF00005 ABC transporter MC28_RS08885 PF12848 ABC transporter MC28_RS08895 PF00005 ABC transporter MC28_RS08900 PF02687 FtsX-like permease family MC28_RS08920 PF03447 Homoserine dehydrogenase, NAD binding domain MC28_RS08920 PF01842 ACT domain MC28_RS08920 PF00742 Homoserine dehydrogenase MC28_RS08925 PF00155 Aminotransferase class I and II MC28_RS08925 PF00392 Bacterial regulatory proteins, gntR family MC28_RS08930 PF01820 D-ala D-ala ligase N-terminus MC28_RS08930 PF07478 D-ala D-ala ligase C-terminus MC28_RS08935 PF03070 TENA/THI-4/PQQC family MC28_RS09060 PF00067 Cytochrome P450 MC28_RS09070 PF00132 Bacterial transferase hexapeptide (six repeats) MC28_RS09075 PF07561 Domain of Unknown Function (DUF1540) MC28_RS09085 PF00067 Cytochrome P450 MC28_RS09100 PF00989 PAS fold MC28_RS09100 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS09100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS09100 PF13188 PAS domain MC28_RS09100 PF13426 PAS domain MC28_RS09105 PF00905 Penicillin binding protein transpeptidase domain MC28_RS09105 PF03717 Penicillin-binding Protein dimerisation domain MC28_RS09110 PF10502 Signal peptidase, peptidase S26 MC28_RS09115 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase MC28_RS09120 PF01177 Asp/Glu/Hydantoin racemase MC28_RS09125 PF07155 ECF-type riboflavin transporter, S component MC28_RS09130 PF00005 ABC transporter MC28_RS09130 PF12558 ATP-binding cassette cobalt transporter MC28_RS09140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS09140 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS09150 PF04229 GrpB protein MC28_RS09155 PF00107 Zinc-binding dehydrogenase MC28_RS09155 PF08240 Alcohol dehydrogenase GroES-like domain MC28_RS09160 PF01569 PAP2 superfamily MC28_RS09165 PF00905 Penicillin binding protein transpeptidase domain MC28_RS09165 PF03793 PASTA domain MC28_RS09165 PF03717 Penicillin-binding Protein dimerisation domain MC28_RS09220 PF13411 MerR HTH family regulatory protein MC28_RS09220 PF07739 TipAS antibiotic-recognition domain MC28_RS09225 PF05977 Transmembrane secretion effector MC28_RS09240 PF03009 Glycerophosphoryl diester phosphodiesterase family MC28_RS09260 PF00392 Bacterial regulatory proteins, gntR family MC28_RS09260 PF00155 Aminotransferase class I and II MC28_RS09265 PF00892 EamA-like transporter family MC28_RS09270 PF01270 Glycosyl hydrolases family 8 MC28_RS09275 PF01156 Inosine-uridine preferring nucleoside hydrolase MC28_RS09285 PF00293 NUDIX domain MC28_RS09285 PF13344 Haloacid dehalogenase-like hydrolase MC28_RS09295 PF00144 Beta-lactamase MC28_RS09305 PF07690 Major Facilitator Superfamily MC28_RS09315 PF00293 NUDIX domain MC28_RS09315 PF09297 NADH pyrophosphatase zinc ribbon domain MC28_RS09320 PF00712 DNA polymerase III beta subunit, N-terminal domain MC28_RS09320 PF02767 DNA polymerase III beta subunit, central domain MC28_RS09320 PF02768 DNA polymerase III beta subunit, C-terminal domain MC28_RS09330 PF12706 Beta-lactamase superfamily domain MC28_RS09350 PF09234 Domain of unknown function (DUF1963) MC28_RS09375 PF01734 Patatin-like phospholipase MC28_RS09380 PF08000 Bacterial PH domain MC28_RS09390 PF12867 DinB superfamily MC28_RS09405 PF02673 Bacitracin resistance protein BacA MC28_RS09415 PF01541 GIY-YIG catalytic domain MC28_RS09445 PF01266 FAD dependent oxidoreductase MC28_RS09470 PF13419 Haloacid dehalogenase-like hydrolase MC28_RS09475 PF00072 Response regulator receiver domain MC28_RS09475 PF00486 Transcriptional regulatory protein, C terminal MC28_RS09480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS09480 PF16736 Single Cache-like MC28_RS09480 PF00989 PAS fold MC28_RS09480 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS09510 PF00005 ABC transporter MC28_RS09515 PF12704 MacB-like periplasmic core domain MC28_RS09515 PF02687 FtsX-like permease family MC28_RS09530 PF07859 alpha/beta hydrolase fold MC28_RS09535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MC28_RS09535 PF03714 Bacterial pullanase-associated domain MC28_RS09535 PF00128 Alpha amylase, catalytic domain MC28_RS09540 PF01447 Thermolysin metallopeptidase, catalytic domain MC28_RS09540 PF02868 Thermolysin metallopeptidase, alpha-helical domain MC28_RS09540 PF07504 Fungalysin/Thermolysin Propeptide Motif MC28_RS09540 PF03413 Peptidase propeptide and YPEB domain MC28_RS09545 PF02872 5'-nucleotidase, C-terminal domain MC28_RS09545 PF00149 Calcineurin-like phosphoesterase MC28_RS09555 PF00344 SecY translocase MC28_RS09560 PF00892 EamA-like transporter family MC28_RS09565 PF00155 Aminotransferase class I and II MC28_RS09565 PF00392 Bacterial regulatory proteins, gntR family MC28_RS09570 PF00107 Zinc-binding dehydrogenase MC28_RS09570 PF08240 Alcohol dehydrogenase GroES-like domain MC28_RS09575 PF00561 alpha/beta hydrolase fold MC28_RS09610 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) MC28_RS09615 PF03413 Peptidase propeptide and YPEB domain MC28_RS09615 PF14620 YpeB sporulation MC28_RS09620 PF01471 Putative peptidoglycan binding domain MC28_RS09620 PF07486 Cell Wall Hydrolase MC28_RS09640 PF03301 Tryptophan 2,3-dioxygenase MC28_RS09645 PF04199 Putative cyclase MC28_RS09650 PF00266 Aminotransferase class-V MC28_RS09655 PF08359 YsiA-like protein, C-terminal region MC28_RS09655 PF00440 Bacterial regulatory proteins, tetR family MC28_RS09665 PF01590 GAF domain MC28_RS09665 PF00158 Sigma-54 interaction domain MC28_RS09665 PF02954 Bacterial regulatory protein, Fis family MC28_RS09680 PF13302 Acetyltransferase (GNAT) domain MC28_RS09685 PF08220 DeoR-like helix-turn-helix domain MC28_RS09685 PF00455 DeoR C terminal sensor domain MC28_RS09705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MC28_RS09705 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC28_RS09710 PF00364 Biotin-requiring enzyme MC28_RS09710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MC28_RS09710 PF02817 e3 binding domain MC28_RS09715 PF02779 Transketolase, pyrimidine binding domain MC28_RS09715 PF02780 Transketolase, C-terminal domain MC28_RS09720 PF00676 Dehydrogenase E1 component MC28_RS09730 PF00106 short chain dehydrogenase MC28_RS09735 PF13789 Domain of unknown function (DUF4181) MC28_RS09760 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS09765 PF00571 CBS domain MC28_RS09765 PF00005 ABC transporter MC28_RS09770 PF04069 Substrate binding domain of ABC-type glycine betaine transport system MC28_RS09775 PF00574 Clp protease MC28_RS09790 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MC28_RS09795 PF13673 Acetyltransferase (GNAT) domain MC28_RS09810 PF18416 N-acetylglucosamine binding protein domain 2 MC28_RS09810 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading MC28_RS09820 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase MC28_RS09825 PF03781 Sulfatase-modifying factor enzyme 1 MC28_RS09840 PF10990 Protein of unknown function (DUF2809) MC28_RS09850 PF04237 YjbR MC28_RS09900 PF13538 UvrD-like helicase C-terminal domain MC28_RS09905 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like MC28_RS09910 PF00270 DEAD/DEAH box helicase MC28_RS09910 PF00570 HRDC domain MC28_RS09910 PF00271 Helicase conserved C-terminal domain MC28_RS09910 PF09382 RQC domain MC28_RS09910 PF16124 RecQ zinc-binding MC28_RS09945 PF02833 DHHA2 domain MC28_RS09945 PF01368 DHH family MC28_RS09950 PF18416 N-acetylglucosamine binding protein domain 2 MC28_RS09950 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading MC28_RS09955 PF05163 DinB family MC28_RS09970 PF03193 RsgA GTPase MC28_RS09975 PF02627 Carboxymuconolactone decarboxylase family MC28_RS09980 PF01235 Sodium:alanine symporter family MC28_RS09985 PF00171 Aldehyde dehydrogenase family MC28_RS09990 PF00701 Dihydrodipicolinate synthetase family MC28_RS09995 PF05544 Proline racemase MC28_RS10000 PF05544 Proline racemase MC28_RS10005 PF01266 FAD dependent oxidoreductase MC28_RS10010 PF02954 Bacterial regulatory protein, Fis family MC28_RS10010 PF13188 PAS domain MC28_RS10010 PF00158 Sigma-54 interaction domain MC28_RS10015 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC28_RS10015 PF04324 BFD-like [2Fe-2S] binding domain MC28_RS10025 PF04324 BFD-like [2Fe-2S] binding domain MC28_RS10025 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC28_RS10040 PF08876 Domain of unknown function (DUF1836) MC28_RS10050 PF01636 Phosphotransferase enzyme family MC28_RS10055 PF01966 HD domain MC28_RS10060 PF09335 SNARE associated Golgi protein MC28_RS10070 PF04914 DltD protein MC28_RS10075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC28_RS10080 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain MC28_RS10080 PF00877 NlpC/P60 family MC28_RS10085 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MC28_RS10085 PF13378 Enolase C-terminal domain-like MC28_RS10130 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain MC28_RS10130 PF02129 X-Pro dipeptidyl-peptidase (S15 family) MC28_RS10135 PF00672 HAMP domain MC28_RS10135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS10135 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS10140 PF00072 Response regulator receiver domain MC28_RS10140 PF00486 Transcriptional regulatory protein, C terminal MC28_RS10160 PF13419 Haloacid dehalogenase-like hydrolase MC28_RS10165 PF01432 Peptidase family M3 MC28_RS10165 PF08439 Oligopeptidase F MC28_RS10170 PF00583 Acetyltransferase (GNAT) family MC28_RS10175 PF02645 Uncharacterised protein, DegV family COG1307 MC28_RS10215 PF07690 Major Facilitator Superfamily MC28_RS10225 PF04519 Polymer-forming cytoskeletal MC28_RS10230 PF13171 Protein of unknown function (DUF4004) MC28_RS10235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC28_RS10235 PF12793 Sugar transport-related sRNA regulator N-term MC28_RS10265 PF04226 Transglycosylase associated protein MC28_RS10280 PF08241 Methyltransferase domain MC28_RS10315 PF00155 Aminotransferase class I and II MC28_RS10320 PF07977 FabA-like domain MC28_RS10325 PF03630 Fumble MC28_RS10345 PF00005 ABC transporter MC28_RS10390 PF01594 AI-2E family transporter MC28_RS10400 PF00296 Luciferase-like monooxygenase MC28_RS10405 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS10410 PF09084 NMT1/THI5 like MC28_RS10415 PF00005 ABC transporter MC28_RS10440 PF02522 Aminoglycoside 3-N-acetyltransferase MC28_RS10470 PF13536 Putative multidrug resistance efflux transporter MC28_RS10500 PF00291 Pyridoxal-phosphate dependent enzyme MC28_RS10505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC28_RS10515 PF01965 DJ-1/PfpI family MC28_RS10520 PF01522 Polysaccharide deacetylase MC28_RS10535 PF07690 Major Facilitator Superfamily MC28_RS10540 PF03741 Integral membrane protein TerC family MC28_RS10545 PF00884 Sulfatase MC28_RS10550 PF12848 ABC transporter MC28_RS10550 PF00005 ABC transporter MC28_RS10555 PF03176 MMPL family MC28_RS10560 PF00440 Bacterial regulatory proteins, tetR family MC28_RS10560 PF16295 Tetracyclin repressor-like, C-terminal domain MC28_RS10570 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MC28_RS10575 PF02153 Prephenate dehydrogenase MC28_RS10575 PF01842 ACT domain MC28_RS10580 PF00155 Aminotransferase class I and II MC28_RS10585 PF01264 Chorismate synthase MC28_RS10590 PF01817 Chorismate mutase type II MC28_RS10590 PF00793 DAHP synthetase I family MC28_RS10610 PF01636 Phosphotransferase enzyme family MC28_RS10630 PF01476 LysM domain MC28_RS10630 PF06725 3D domain MC28_RS10640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC28_RS10645 PF13673 Acetyltransferase (GNAT) domain MC28_RS10645 PF00117 Glutamine amidotransferase class-I MC28_RS10645 PF13302 Acetyltransferase (GNAT) domain MC28_RS10645 PF03352 Methyladenine glycosylase MC28_RS10645 PF00958 GMP synthase C terminal domain MC28_RS10650 PF03358 NADPH-dependent FMN reductase MC28_RS10665 PF06039 Malate:quinone oxidoreductase (Mqo) MC28_RS10670 PF13407 Periplasmic binding protein domain MC28_RS10675 PF02653 Branched-chain amino acid transport system / permease component MC28_RS10680 PF02653 Branched-chain amino acid transport system / permease component MC28_RS10685 PF00005 ABC transporter MC28_RS10690 PF04198 Putative sugar-binding domain MC28_RS10690 PF00325 Bacterial regulatory proteins, crp family MC28_RS10695 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MC28_RS10695 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MC28_RS10705 PF01791 DeoC/LacD family aldolase MC28_RS10730 PF03992 Antibiotic biosynthesis monooxygenase MC28_RS10750 PF14310 Fibronectin type III-like domain MC28_RS10750 PF00933 Glycosyl hydrolase family 3 N terminal domain MC28_RS10750 PF01915 Glycosyl hydrolase family 3 C-terminal domain MC28_RS10755 PF12833 Helix-turn-helix domain MC28_RS10755 PF17853 GGDEF-like domain MC28_RS10760 PF07662 Na+ dependent nucleoside transporter C-terminus MC28_RS10760 PF01773 Na+ dependent nucleoside transporter N-terminus MC28_RS10765 PF00171 Aldehyde dehydrogenase family MC28_RS10770 PF00696 Amino acid kinase family MC28_RS10770 PF01472 PUA domain MC28_RS10775 PF14748 Pyrroline-5-carboxylate reductase dimerisation MC28_RS10775 PF03807 NADP oxidoreductase coenzyme F420-dependent MC28_RS10780 PF01546 Peptidase family M20/M25/M40 MC28_RS10785 PF09339 IclR helix-turn-helix domain MC28_RS10785 PF01614 Bacterial transcriptional regulator MC28_RS10790 PF00324 Amino acid permease MC28_RS10800 PF00487 Fatty acid desaturase MC28_RS10810 PF00245 Alkaline phosphatase MC28_RS10815 PF11188 Protein of unknown function (DUF2975) MC28_RS10820 PF13443 Cro/C1-type HTH DNA-binding domain MC28_RS10845 PF13302 Acetyltransferase (GNAT) domain MC28_RS10850 PF12681 Glyoxalase-like domain MC28_RS10870 PF17863 AAA lid domain MC28_RS10870 PF07726 ATPase family associated with various cellular activities (AAA) MC28_RS10885 PF07690 Major Facilitator Superfamily MC28_RS10890 PF00202 Aminotransferase class-III MC28_RS10895 PF00199 Catalase MC28_RS10895 PF06628 Catalase-related immune-responsive MC28_RS10900 PF01752 Collagenase MC28_RS10900 PF08453 Peptidase family M9 N-terminal MC28_RS10900 PF18496 Collagenase G catalytic helper subdomain MC28_RS10900 PF04151 Bacterial pre-peptidase C-terminal domain MC28_RS10910 PF13382 Adenine deaminase C-terminal domain MC28_RS10910 PF01979 Amidohydrolase family MC28_RS10915 PF00144 Beta-lactamase MC28_RS10935 PF07726 ATPase family associated with various cellular activities (AAA) MC28_RS10935 PF17863 AAA lid domain MC28_RS10945 PF09346 SMI1 / KNR4 family (SUKH-1) MC28_RS10960 PF14436 Bacterial EndoU nuclease MC28_RS10960 PF04740 LXG domain of WXG superfamily MC28_RS10980 PF00881 Nitroreductase family MC28_RS10985 PF01047 MarR family MC28_RS10990 PF03764 Elongation factor G, domain IV MC28_RS10990 PF14492 Elongation Factor G, domain II MC28_RS10990 PF00679 Elongation factor G C-terminus MC28_RS10990 PF00009 Elongation factor Tu GTP binding domain MC28_RS11000 PF00293 NUDIX domain MC28_RS11005 PF05139 Erythromycin esterase MC28_RS11010 PF16363 GDP-mannose 4,6 dehydratase MC28_RS11025 PF12833 Helix-turn-helix domain MC28_RS11025 PF02311 AraC-like ligand binding domain MC28_RS11030 PF00583 Acetyltransferase (GNAT) family MC28_RS11045 PF00892 EamA-like transporter family MC28_RS11050 PF00392 Bacterial regulatory proteins, gntR family MC28_RS11050 PF00155 Aminotransferase class I and II MC28_RS11060 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 MC28_RS11065 PF13031 Protein of unknown function (DUF3892) MC28_RS11070 PF00672 HAMP domain MC28_RS11070 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS11075 PF00072 Response regulator receiver domain MC28_RS11075 PF00486 Transcriptional regulatory protein, C terminal MC28_RS11080 PF00561 alpha/beta hydrolase fold MC28_RS11110 PF01925 Sulfite exporter TauE/SafE MC28_RS11120 PF00324 Amino acid permease MC28_RS11130 PF08713 DNA alkylation repair enzyme MC28_RS11135 PF10898 Protein of unknown function (DUF2716) MC28_RS11145 PF00293 NUDIX domain MC28_RS11150 PF04989 Cephalosporin hydroxylase MC28_RS11155 PF10502 Signal peptidase, peptidase S26 MC28_RS11160 PF03717 Penicillin-binding Protein dimerisation domain MC28_RS11160 PF00905 Penicillin binding protein transpeptidase domain MC28_RS11165 PF02146 Sir2 family MC28_RS11170 PF01470 Pyroglutamyl peptidase MC28_RS11185 PF03746 LamB/YcsF family MC28_RS11190 PF02626 Carboxyltransferase domain, subdomain A and B MC28_RS11195 PF02682 Carboxyltransferase domain, subdomain C and D MC28_RS11200 PF01614 Bacterial transcriptional regulator MC28_RS11200 PF09339 IclR helix-turn-helix domain MC28_RS11210 PF10502 Signal peptidase, peptidase S26 MC28_RS11215 PF03932 CutC family MC28_RS11235 PF08028 Acyl-CoA dehydrogenase, C-terminal domain MC28_RS11235 PF02770 Acyl-CoA dehydrogenase, middle domain MC28_RS11235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MC28_RS11250 PF07670 Nucleoside recognition MC28_RS11255 PF07859 alpha/beta hydrolase fold MC28_RS11275 PF10903 Protein of unknown function (DUF2691) MC28_RS11280 PF02915 Rubrerythrin MC28_RS11290 PF00440 Bacterial regulatory proteins, tetR family MC28_RS11295 PF05547 Immune inhibitor A peptidase M6 MC28_RS11300 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MC28_RS11300 PF00391 PEP-utilising enzyme, mobile domain MC28_RS11315 PF11799 impB/mucB/samB family C-terminal domain MC28_RS11315 PF00817 impB/mucB/samB family MC28_RS11315 PF11798 IMS family HHH motif MC28_RS11325 PF02557 D-alanyl-D-alanine carboxypeptidase MC28_RS11330 PF02872 5'-nucleotidase, C-terminal domain MC28_RS11330 PF17936 Bacterial Ig domain MC28_RS11330 PF00149 Calcineurin-like phosphoesterase MC28_RS11335 PF00561 alpha/beta hydrolase fold MC28_RS11340 PF00857 Isochorismatase family MC28_RS11355 PF01979 Amidohydrolase family MC28_RS11360 PF03466 LysR substrate binding domain MC28_RS11360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC28_RS11375 PF01544 CorA-like Mg2+ transporter protein MC28_RS11410 PF03073 TspO/MBR family MC28_RS11415 PF00875 DNA photolyase MC28_RS11415 PF03441 FAD binding domain of DNA photolyase MC28_RS11425 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) MC28_RS11430 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MC28_RS11430 PF00361 Proton-conducting membrane transporter MC28_RS11435 PF10057 Uncharacterized conserved protein (DUF2294) MC28_RS11445 PF05504 Spore germination B3/ GerAC like, C-terminal MC28_RS11450 PF03323 Bacillus/Clostridium GerA spore germination protein MC28_RS11460 PF01040 UbiA prenyltransferase family MC28_RS11465 PF12833 Helix-turn-helix domain MC28_RS11465 PF01965 DJ-1/PfpI family MC28_RS11485 PF01451 Low molecular weight phosphotyrosine protein phosphatase MC28_RS11490 PF01758 Sodium Bile acid symporter family MC28_RS11495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC28_RS11500 PF01022 Bacterial regulatory protein, arsR family MC28_RS11520 PF18665 Tetracyclin repressor-like, C-terminal domain MC28_RS11520 PF00440 Bacterial regulatory proteins, tetR family MC28_RS11530 PF07840 FadR C-terminal domain MC28_RS11530 PF00392 Bacterial regulatory proteins, gntR family MC28_RS11545 PF03845 Spore germination protein MC28_RS11550 PF03323 Bacillus/Clostridium GerA spore germination protein MC28_RS11555 PF07690 Major Facilitator Superfamily MC28_RS11565 PF01037 Lrp/AsnC ligand binding domain MC28_RS11580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC28_RS11590 PF08803 Putative mono-oxygenase ydhR MC28_RS11600 PF12802 MarR family MC28_RS11635 PF00067 Cytochrome P450 MC28_RS11635 PF00175 Oxidoreductase NAD-binding domain MC28_RS11635 PF00258 Flavodoxin MC28_RS11635 PF00667 FAD binding domain MC28_RS11640 PF02567 Phenazine biosynthesis-like protein MC28_RS11645 PF07690 Major Facilitator Superfamily MC28_RS11650 PF00291 Pyridoxal-phosphate dependent enzyme MC28_RS11660 PF00144 Beta-lactamase MC28_RS11675 PF00753 Metallo-beta-lactamase superfamily MC28_RS11680 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family MC28_RS11690 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MC28_RS11690 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MC28_RS11715 PF04072 Leucine carboxyl methyltransferase MC28_RS11730 PF00005 ABC transporter MC28_RS11735 PF02687 FtsX-like permease family MC28_RS11745 PF00672 HAMP domain MC28_RS11745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS11745 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS11750 PF00486 Transcriptional regulatory protein, C terminal MC28_RS11750 PF00072 Response regulator receiver domain MC28_RS11755 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) MC28_RS11755 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 MC28_RS11765 PF02016 LD-carboxypeptidase N-terminal domain MC28_RS11765 PF17676 LD-carboxypeptidase C-terminal domain MC28_RS11785 PF01842 ACT domain MC28_RS11785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MC28_RS11785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MC28_RS11790 PF00266 Aminotransferase class-V MC28_RS11815 PF01804 Penicillin amidase MC28_RS11830 PF07690 Major Facilitator Superfamily MC28_RS11855 PF04740 LXG domain of WXG superfamily MC28_RS11890 PF02557 D-alanyl-D-alanine carboxypeptidase MC28_RS11895 PF09587 Bacterial capsule synthesis protein PGA_cap MC28_RS11900 PF07969 Amidohydrolase family MC28_RS11905 PF00202 Aminotransferase class-III MC28_RS11910 PF00171 Aldehyde dehydrogenase family MC28_RS11920 PF01554 MatE MC28_RS11930 PF01266 FAD dependent oxidoreductase MC28_RS11940 PF14044 NETI protein MC28_RS11945 PF07690 Major Facilitator Superfamily MC28_RS11955 PF12697 Alpha/beta hydrolase family MC28_RS11960 PF01047 MarR family MC28_RS11965 PF07690 Major Facilitator Superfamily MC28_RS11975 PF00144 Beta-lactamase MC28_RS11985 PF00005 ABC transporter MC28_RS11990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS11990 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS11995 PF00072 Response regulator receiver domain MC28_RS11995 PF00486 Transcriptional regulatory protein, C terminal MC28_RS12005 PF01289 Thiol-activated cytolysin MC28_RS12005 PF17440 Thiol-activated cytolysin beta sandwich domain MC28_RS12015 PF02667 Short chain fatty acid transporter MC28_RS12025 PF02525 Flavodoxin-like fold MC28_RS12045 PF14256 YwiC-like protein MC28_RS12055 PF00005 ABC transporter MC28_RS12080 PF03737 Aldolase/RraA MC28_RS12085 PF03606 C4-dicarboxylate anaerobic carrier MC28_RS12090 PF04231 Endonuclease I MC28_RS12100 PF01048 Phosphorylase superfamily MC28_RS12105 PF04073 Aminoacyl-tRNA editing domain MC28_RS12110 PF13393 Histidyl-tRNA synthetase MC28_RS12110 PF03129 Anticodon binding domain MC28_RS12125 PF01638 HxlR-like helix-turn-helix MC28_RS12130 PF00881 Nitroreductase family MC28_RS12140 PF00224 Pyruvate kinase, barrel domain MC28_RS12140 PF02887 Pyruvate kinase, alpha/beta domain MC28_RS12140 PF00391 PEP-utilising enzyme, mobile domain MC28_RS12175 PF00005 ABC transporter MC28_RS12200 PF13419 Haloacid dehalogenase-like hydrolase MC28_RS12210 PF13350 Tyrosine phosphatase family MC28_RS12225 PF13344 Haloacid dehalogenase-like hydrolase MC28_RS12225 PF00293 NUDIX domain MC28_RS12235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC28_RS12240 PF00480 ROK family MC28_RS12245 PF07690 Major Facilitator Superfamily MC28_RS12250 PF12464 Maltose acetyltransferase MC28_RS12250 PF14602 Hexapeptide repeat of succinyl-transferase MC28_RS12255 PF00579 tRNA synthetases class I (W and Y) MC28_RS12260 PF13288 DXP reductoisomerase C-terminal domain MC28_RS12260 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MC28_RS12260 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MC28_RS12265 PF01594 AI-2E family transporter MC28_RS12300 PF07690 Major Facilitator Superfamily MC28_RS12315 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) MC28_RS12325 PF01595 Cyclin M transmembrane N-terminal domain MC28_RS12325 PF03471 Transporter associated domain MC28_RS12325 PF00571 CBS domain MC28_RS12330 PF13411 MerR HTH family regulatory protein MC28_RS12340 PF00483 Nucleotidyl transferase MC28_RS12345 PF16363 GDP-mannose 4,6 dehydratase MC28_RS12350 PF08421 Putative zinc binding domain MC28_RS12350 PF08484 C-methyltransferase C-terminal domain MC28_RS12355 PF01370 NAD dependent epimerase/dehydratase family MC28_RS12365 PF00892 EamA-like transporter family MC28_RS12370 PF00805 Pentapeptide repeats (8 copies) MC28_RS12375 PF06906 Protein of unknown function (DUF1272) MC28_RS12380 PF10282 Lactonase, 7-bladed beta-propeller MC28_RS12385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MC28_RS12385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MC28_RS12390 PF02447 GntP family permease MC28_RS12395 PF00923 Transaldolase/Fructose-6-phosphate aldolase MC28_RS12400 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MC28_RS12400 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain MC28_RS12405 PF00456 Transketolase, thiamine diphosphate binding domain MC28_RS12405 PF02779 Transketolase, pyrimidine binding domain MC28_RS12405 PF02780 Transketolase, C-terminal domain MC28_RS12410 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain MC28_RS12410 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain MC28_RS12415 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain MC28_RS12415 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain MC28_RS12420 PF00107 Zinc-binding dehydrogenase MC28_RS12420 PF08240 Alcohol dehydrogenase GroES-like domain MC28_RS12425 PF00296 Luciferase-like monooxygenase MC28_RS12430 PF00107 Zinc-binding dehydrogenase MC28_RS12430 PF08659 KR domain MC28_RS12430 PF00109 Beta-ketoacyl synthase, N-terminal domain MC28_RS12430 PF00550 Phosphopantetheine attachment site MC28_RS12430 PF14765 Polyketide synthase dehydratase MC28_RS12430 PF08240 Alcohol dehydrogenase GroES-like domain MC28_RS12430 PF00698 Acyl transferase domain MC28_RS12430 PF16197 Ketoacyl-synthetase C-terminal extension MC28_RS12430 PF02801 Beta-ketoacyl synthase, C-terminal domain MC28_RS12440 PF00106 short chain dehydrogenase MC28_RS12445 PF02868 Thermolysin metallopeptidase, alpha-helical domain MC28_RS12445 PF01447 Thermolysin metallopeptidase, catalytic domain MC28_RS12445 PF03413 Peptidase propeptide and YPEB domain MC28_RS12445 PF07504 Fungalysin/Thermolysin Propeptide Motif MC28_RS12455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC28_RS12455 PF00672 HAMP domain MC28_RS12455 PF12729 Four helix bundle sensory module for signal transduction MC28_RS12460 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) MC28_RS12465 PF01872 RibD C-terminal domain MC28_RS12465 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MC28_RS12470 PF00925 GTP cyclohydrolase II MC28_RS12470 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MC28_RS12475 PF01638 HxlR-like helix-turn-helix MC28_RS12490 PF00248 Aldo/keto reductase family MC28_RS12495 PF07690 Major Facilitator Superfamily MC28_RS12505 PF03928 Haem-degrading MC28_RS12515 PF01047 MarR family MC28_RS12520 PF03831 PhnA domain MC28_RS12520 PF08274 PhnA Zinc-Ribbon MC28_RS12525 PF01740 STAS domain MC28_RS12525 PF00916 Sulfate permease family MC28_RS12545 PF13443 Cro/C1-type HTH DNA-binding domain MC28_RS12550 PF11188 Protein of unknown function (DUF2975) MC28_RS12575 PF03960 ArsC family MC28_RS12580 PF01638 HxlR-like helix-turn-helix MC28_RS12585 PF07702 UTRA domain MC28_RS12585 PF00392 Bacterial regulatory proteins, gntR family MC28_RS12590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MC28_RS12590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MC28_RS12600 PF01638 HxlR-like helix-turn-helix MC28_RS12610 PF01638 HxlR-like helix-turn-helix MC28_RS12615 PF00248 Aldo/keto reductase family MC28_RS12630 PF13472 GDSL-like Lipase/Acylhydrolase family MC28_RS12660 PF02567 Phenazine biosynthesis-like protein MC28_RS12680 PF00501 AMP-binding enzyme MC28_RS12680 PF13193 AMP-binding enzyme C-terminal domain MC28_RS12685 PF02525 Flavodoxin-like fold MC28_RS12690 PF01638 HxlR-like helix-turn-helix MC28_RS12700 PF01022 Bacterial regulatory protein, arsR family MC28_RS12705 PF01522 Polysaccharide deacetylase MC28_RS12710 PF12791 Anti-sigma factor N-terminus MC28_RS12715 PF04542 Sigma-70 region 2 MC28_RS12720 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 MC28_RS12720 PF00535 Glycosyl transferase family 2 MC28_RS12725 PF01810 LysE type translocator MC28_RS12755 PF01061 ABC-2 type transporter MC28_RS12760 PF13732 Domain of unknown function (DUF4162) MC28_RS12760 PF00005 ABC transporter MC28_RS12775 PF03063 Prismane/CO dehydrogenase family MC28_RS12780 PF00753 Metallo-beta-lactamase superfamily MC28_RS12785 PF01183 Glycosyl hydrolases family 25 MC28_RS12785 PF01471 Putative peptidoglycan binding domain MC28_RS12810 PF00144 Beta-lactamase MC28_RS12850 PF00753 Metallo-beta-lactamase superfamily MC28_RS12855 PF08240 Alcohol dehydrogenase GroES-like domain MC28_RS12855 PF00107 Zinc-binding dehydrogenase MC28_RS12860 PF00324 Amino acid permease MC28_RS12865 PF00583 Acetyltransferase (GNAT) family MC28_RS12865 PF13508 Acetyltransferase (GNAT) domain MC28_RS12870 PF07690 Major Facilitator Superfamily MC28_RS12915 PF02585 GlcNAc-PI de-N-acetylase MC28_RS12920 PF08830 Protein of unknown function (DUF1806) MC28_RS12925 PF03600 Citrate transporter MC28_RS12935 PF00583 Acetyltransferase (GNAT) family MC28_RS12940 PF01497 Periplasmic binding protein MC28_RS12945 PF01032 FecCD transport family MC28_RS12950 PF01032 FecCD transport family MC28_RS12955 PF05675 Protein of unknown function (DUF817) MC28_RS12960 PF13170 Protein of unknown function (DUF4003) MC28_RS12975 PF10901 Protein of unknown function (DUF2690) MC28_RS12985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC28_RS12985 PF03466 LysR substrate binding domain MC28_RS12990 PF08240 Alcohol dehydrogenase GroES-like domain MC28_RS12990 PF00107 Zinc-binding dehydrogenase MC28_RS13005 PF01713 Smr domain MC28_RS13005 PF00488 MutS domain V MC28_RS13010 PF09154 Domain of unknown function (DUF1939) MC28_RS13010 PF00128 Alpha amylase, catalytic domain MC28_RS13015 PF00797 N-acetyltransferase MC28_RS13020 PF08439 Oligopeptidase F MC28_RS13020 PF01432 Peptidase family M3 MC28_RS13025 PF04371 Porphyromonas-type peptidyl-arginine deiminase MC28_RS13030 PF07969 Amidohydrolase family MC28_RS13045 PF01062 Bestrophin, RFP-TM, chloride channel MC28_RS13050 PF06146 Phosphate-starvation-inducible E MC28_RS13055 PF04371 Porphyromonas-type peptidyl-arginine deiminase MC28_RS13060 PF00144 Beta-lactamase MC28_RS13075 PF03466 LysR substrate binding domain MC28_RS13075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC28_RS13090 PF03009 Glycerophosphoryl diester phosphodiesterase family MC28_RS13095 PF01494 FAD binding domain MC28_RS13105 PF01022 Bacterial regulatory protein, arsR family MC28_RS13110 PF00107 Zinc-binding dehydrogenase MC28_RS13110 PF08240 Alcohol dehydrogenase GroES-like domain MC28_RS13115 PF02696 Uncharacterized ACR, YdiU/UPF0061 family MC28_RS13120 PF18801 response regulator aspartate phosphatase H, N terminal MC28_RS13130 PF04299 Putative FMN-binding domain MC28_RS13135 PF04229 GrpB protein MC28_RS13145 PF02913 FAD linked oxidases, C-terminal domain MC28_RS13145 PF01565 FAD binding domain MC28_RS13160 PF00704 Glycosyl hydrolases family 18 MC28_RS13170 PF00563 EAL domain MC28_RS13170 PF00990 Diguanylate cyclase, GGDEF domain MC28_RS13170 PF03707 Bacterial signalling protein N terminal repeat MC28_RS13180 PF02557 D-alanyl-D-alanine carboxypeptidase MC28_RS13195 PF01022 Bacterial regulatory protein, arsR family MC28_RS13210 PF13333 Integrase core domain MC28_RS13210 PF00665 Integrase core domain MC28_RS13210 PF13276 HTH-like domain MC28_RS13220 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS13220 PF00989 PAS fold MC28_RS13220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS13225 PF18496 Collagenase G catalytic helper subdomain MC28_RS13225 PF01752 Collagenase MC28_RS13225 PF08453 Peptidase family M9 N-terminal MC28_RS13230 PF02308 MgtC family MC28_RS13240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC28_RS13245 PF04294 VanW like protein MC28_RS13255 PF13037 Domain of unknown function (DUF3898) MC28_RS13255 PF13039 Protein of unknown function (DUF3900) MC28_RS13270 PF00313 'Cold-shock' DNA-binding domain MC28_RS13280 PF00258 Flavodoxin MC28_RS13290 PF00293 NUDIX domain MC28_RS13300 PF00132 Bacterial transferase hexapeptide (six repeats) MC28_RS13310 PF00106 short chain dehydrogenase MC28_RS13320 PF00206 Lyase MC28_RS13320 PF14698 Argininosuccinate lyase C-terminal MC28_RS13330 PF01156 Inosine-uridine preferring nucleoside hydrolase MC28_RS13335 PF00474 Sodium:solute symporter family MC28_RS13345 PF00171 Aldehyde dehydrogenase family MC28_RS13355 PF14151 YfhD-like protein MC28_RS13360 PF13249 Squalene-hopene cyclase N-terminal domain MC28_RS13360 PF13243 Squalene-hopene cyclase C-terminal domain MC28_RS13365 PF02681 Divergent PAP2 family MC28_RS13370 PF00892 EamA-like transporter family MC28_RS13375 PF06961 Protein of unknown function (DUF1294) MC28_RS13390 PF10609 NUBPL iron-transfer P-loop NTPase MC28_RS13400 PF02391 MoaE protein MC28_RS13405 PF03453 MoeA N-terminal region (domain I and II) MC28_RS13405 PF00994 Probable molybdopterin binding domain MC28_RS13405 PF03454 MoeA C-terminal region (domain IV) MC28_RS13410 PF00899 ThiF family MC28_RS13415 PF01226 Formate/nitrite transporter MC28_RS13420 PF06463 Molybdenum Cofactor Synthesis C MC28_RS13420 PF04055 Radical SAM superfamily MC28_RS13425 PF02634 FdhD/NarQ family MC28_RS13430 PF10057 Uncharacterized conserved protein (DUF2294) MC28_RS13435 PF07849 Protein of unknown function (DUF1641) MC28_RS13440 PF01568 Molydopterin dinucleotide binding domain MC28_RS13440 PF00037 4Fe-4S binding domain MC28_RS13440 PF00384 Molybdopterin oxidoreductase MC28_RS13440 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MC28_RS13440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MC28_RS13450 PF03323 Bacillus/Clostridium GerA spore germination protein MC28_RS13460 PF05504 Spore germination B3/ GerAC like, C-terminal MC28_RS13465 PF13520 Amino acid permease MC28_RS13500 PF08241 Methyltransferase domain MC28_RS13505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC28_RS13510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC28_RS13515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC28_RS13520 PF00375 Sodium:dicarboxylate symporter family MC28_RS13525 PF03816 Cell envelope-related transcriptional attenuator domain MC28_RS13535 PF04542 Sigma-70 region 2 MC28_RS13535 PF08281 Sigma-70, region 4 MC28_RS13545 PF00005 ABC transporter MC28_RS13545 PF13732 Domain of unknown function (DUF4162) MC28_RS13555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MC28_RS13555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MC28_RS13560 PF03989 DNA gyrase C-terminal domain, beta-propeller MC28_RS13560 PF00521 DNA gyrase/topoisomerase IV, subunit A MC28_RS13565 PF00204 DNA gyrase B MC28_RS13565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS13565 PF01751 Toprim domain MC28_RS13565 PF00986 DNA gyrase B subunit, carboxyl terminus MC28_RS13570 PF13380 CoA binding domain MC28_RS13575 PF13180 PDZ domain MC28_RS13580 PF00072 Response regulator receiver domain MC28_RS13580 PF00486 Transcriptional regulatory protein, C terminal MC28_RS13590 PF13597 Anaerobic ribonucleoside-triphosphate reductase MC28_RS13590 PF03477 ATP cone domain MC28_RS13595 PF02660 Glycerol-3-phosphate acyltransferase MC28_RS13600 PF01521 Iron-sulphur cluster biosynthesis MC28_RS13605 PF03061 Thioesterase superfamily MC28_RS13610 PF00704 Glycosyl hydrolases family 18 MC28_RS13610 PF01476 LysM domain MC28_RS13615 PF08177 Small acid-soluble spore protein N family MC28_RS13620 PF13040 Fur-regulated basic protein B MC28_RS13625 PF02811 PHP domain MC28_RS13625 PF11490 DNA polymerase III polC-type N-terminus II MC28_RS13625 PF07733 Bacterial DNA polymerase III alpha NTPase domain MC28_RS13625 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MC28_RS13625 PF01336 OB-fold nucleic acid binding domain MC28_RS13625 PF14579 Helix-hairpin-helix motif MC28_RS13625 PF00929 Exonuclease MC28_RS13630 PF00578 AhpC/TSA family MC28_RS13640 PF00664 ABC transporter transmembrane region MC28_RS13640 PF00005 ABC transporter MC28_RS13645 PF00330 Aconitase family (aconitate hydratase) MC28_RS13645 PF00694 Aconitase C-terminal domain MC28_RS13655 PF01522 Polysaccharide deacetylase MC28_RS13665 PF08179 Small acid-soluble spore protein P family MC28_RS13675 PF07690 Major Facilitator Superfamily MC28_RS13685 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MC28_RS13685 PF01411 tRNA synthetases class II (A) MC28_RS13685 PF02272 DHHA1 domain MC28_RS13690 PF13344 Haloacid dehalogenase-like hydrolase MC28_RS13690 PF00293 NUDIX domain MC28_RS13700 PF02803 Thiolase, C-terminal domain MC28_RS13700 PF00108 Thiolase, N-terminal domain MC28_RS13705 PF00501 AMP-binding enzyme MC28_RS13705 PF13193 AMP-binding enzyme C-terminal domain MC28_RS13710 PF02632 BioY family MC28_RS13715 PF00501 AMP-binding enzyme MC28_RS13715 PF13193 AMP-binding enzyme C-terminal domain MC28_RS13720 PF01381 Helix-turn-helix MC28_RS13740 PF05532 CsbD-like MC28_RS13760 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) MC28_RS13760 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 MC28_RS13770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS13770 PF13426 PAS domain MC28_RS13770 PF13188 PAS domain MC28_RS13770 PF00989 PAS fold MC28_RS13770 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS13775 PF01738 Dienelactone hydrolase family MC28_RS13780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC28_RS13785 PF01645 Conserved region in glutamate synthase MC28_RS13790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MC28_RS13795 PF02559 CarD-like/TRCF domain MC28_RS13800 PF00491 Arginase family MC28_RS13805 PF01979 Amidohydrolase family MC28_RS13810 PF01175 Urocanase Rossmann-like domain MC28_RS13810 PF17392 Urocanase C-terminal domain MC28_RS13810 PF17391 Urocanase N-terminal domain MC28_RS13815 PF00221 Aromatic amino acid lyase MC28_RS13820 PF09021 HutP MC28_RS13845 PF11084 Protein of unknown function (DUF2621) MC28_RS13850 PF07301 Protein of unknown function (DUF1453) MC28_RS13855 PF02683 Cytochrome C biogenesis protein transmembrane region MC28_RS13865 PF01546 Peptidase family M20/M25/M40 MC28_RS13865 PF07687 Peptidase dimerisation domain MC28_RS13875 PF00005 ABC transporter MC28_RS13890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC28_RS13890 PF03466 LysR substrate binding domain MC28_RS13895 PF03788 LrgA family MC28_RS13900 PF04172 LrgB-like family MC28_RS13905 PF13344 Haloacid dehalogenase-like hydrolase MC28_RS13905 PF00293 NUDIX domain MC28_RS13915 PF01925 Sulfite exporter TauE/SafE MC28_RS13940 PF01183 Glycosyl hydrolases family 25 MC28_RS13940 PF08239 Bacterial SH3 domain MC28_RS13945 PF00664 ABC transporter transmembrane region MC28_RS13945 PF00005 ABC transporter MC28_RS13950 PF00005 ABC transporter MC28_RS13950 PF00664 ABC transporter transmembrane region MC28_RS13955 PF03672 Uncharacterised protein family (UPF0154) MC28_RS13960 PF10747 Sporulation inhibitor of replication protein SirA MC28_RS13965 PF00456 Transketolase, thiamine diphosphate binding domain MC28_RS13965 PF02779 Transketolase, pyrimidine binding domain MC28_RS13965 PF02780 Transketolase, C-terminal domain MC28_RS13970 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS13975 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS13980 PF00005 ABC transporter MC28_RS13990 PF00149 Calcineurin-like phosphoesterase MC28_RS13990 PF02872 5'-nucleotidase, C-terminal domain MC28_RS13995 PF05979 Bacterial protein of unknown function (DUF896) MC28_RS14000 PF00239 Resolvase, N terminal domain MC28_RS14005 PF00717 Peptidase S24-like MC28_RS14005 PF01726 LexA DNA binding domain MC28_RS14020 PF03551 Transcriptional regulator PadR-like family MC28_RS14025 PF00005 ABC transporter MC28_RS14025 PF00664 ABC transporter transmembrane region MC28_RS14055 PF00733 Asparagine synthase MC28_RS14055 PF13537 Glutamine amidotransferase domain MC28_RS14060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MC28_RS14070 PF07478 D-ala D-ala ligase C-terminus MC28_RS14070 PF01820 D-ala D-ala ligase N-terminus MC28_RS14075 PF02397 Bacterial sugar transferase MC28_RS14105 PF00534 Glycosyl transferases group 1 MC28_RS14105 PF13439 Glycosyltransferase Family 4 MC28_RS14115 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase MC28_RS14115 PF00535 Glycosyl transferase family 2 MC28_RS14120 PF13439 Glycosyltransferase Family 4 MC28_RS14120 PF00534 Glycosyl transferases group 1 MC28_RS14125 PF00534 Glycosyl transferases group 1 MC28_RS14125 PF13439 Glycosyltransferase Family 4 MC28_RS14130 PF02719 Polysaccharide biosynthesis protein MC28_RS14135 PF13614 AAA domain MC28_RS14145 PF03951 Glutamine synthetase, beta-Grasp domain MC28_RS14145 PF00120 Glutamine synthetase, catalytic domain MC28_RS14150 PF13411 MerR HTH family regulatory protein MC28_RS14155 PF06838 Methionine gamma-lyase MC28_RS14160 PF16360 GTP-binding GTPase Middle Region MC28_RS14160 PF13167 GTP-binding GTPase N-terminal MC28_RS14160 PF01926 50S ribosome-binding GTPase MC28_RS14165 PF03458 UPF0126 domain MC28_RS14175 PF00004 ATPase family associated with various cellular activities (AAA) MC28_RS14175 PF17866 AAA lid domain MC28_RS14205 PF00665 Integrase core domain MC28_RS14205 PF13333 Integrase core domain MC28_RS14205 PF13276 HTH-like domain MC28_RS14210 PF17209 Hfq protein MC28_RS14225 PF06725 3D domain MC28_RS14225 PF01476 LysM domain MC28_RS14230 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MC28_RS14230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MC28_RS14235 PF00294 pfkB family carbohydrate kinase MC28_RS14240 PF00455 DeoR C terminal sensor domain MC28_RS14240 PF08220 DeoR-like helix-turn-helix domain MC28_RS14245 PF00465 Iron-containing alcohol dehydrogenase MC28_RS14250 PF04238 Protein of unknown function (DUF420) MC28_RS14265 PF00324 Amino acid permease MC28_RS14270 PF00041 Fibronectin type III domain MC28_RS14270 PF00704 Glycosyl hydrolases family 18 MC28_RS14275 PF07687 Peptidase dimerisation domain MC28_RS14275 PF01546 Peptidase family M20/M25/M40 MC28_RS14280 PF00149 Calcineurin-like phosphoesterase MC28_RS14280 PF10518 TAT (twin-arginine translocation) pathway signal sequence MC28_RS14285 PF00216 Bacterial DNA-binding protein MC28_RS14295 PF00403 Heavy-metal-associated domain MC28_RS14300 PF00403 Heavy-metal-associated domain MC28_RS14305 PF02583 Metal-sensitive transcriptional repressor MC28_RS14320 PF08241 Methyltransferase domain MC28_RS14325 PF00756 Putative esterase MC28_RS14330 PF00005 ABC transporter MC28_RS14335 PF01032 FecCD transport family MC28_RS14340 PF01032 FecCD transport family MC28_RS14345 PF01497 Periplasmic binding protein MC28_RS14350 PF03372 Endonuclease/Exonuclease/phosphatase family MC28_RS14355 PF12833 Helix-turn-helix domain MC28_RS14355 PF02805 Metal binding domain of Ada MC28_RS14360 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MC28_RS14360 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MC28_RS14365 PF00730 HhH-GPD superfamily base excision DNA repair protein MC28_RS14365 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain MC28_RS14370 PF07687 Peptidase dimerisation domain MC28_RS14370 PF01546 Peptidase family M20/M25/M40 MC28_RS14395 PF03707 Bacterial signalling protein N terminal repeat MC28_RS14395 PF00990 Diguanylate cyclase, GGDEF domain MC28_RS14395 PF00563 EAL domain MC28_RS14400 PF03033 Glycosyltransferase family 28 N-terminal domain MC28_RS14400 PF04101 Glycosyltransferase family 28 C-terminal domain MC28_RS14410 PF16363 GDP-mannose 4,6 dehydratase MC28_RS14415 PF02719 Polysaccharide biosynthesis protein MC28_RS14415 PF08485 Polysaccharide biosynthesis protein C-terminal MC28_RS14430 PF10787 Uncharacterised protein from bacillus cereus group MC28_RS14435 PF04172 LrgB-like family MC28_RS14440 PF03788 LrgA family MC28_RS14445 PF00392 Bacterial regulatory proteins, gntR family MC28_RS14445 PF00155 Aminotransferase class I and II MC28_RS14450 PF00364 Biotin-requiring enzyme MC28_RS14450 PF00561 alpha/beta hydrolase fold MC28_RS14455 PF02585 GlcNAc-PI de-N-acetylase MC28_RS14465 PF07702 UTRA domain MC28_RS14465 PF00392 Bacterial regulatory proteins, gntR family MC28_RS14470 PF00232 Glycosyl hydrolase family 1 MC28_RS14475 PF00388 Phosphatidylinositol-specific phospholipase C, X domain MC28_RS14480 PF00082 Subtilase family MC28_RS14485 PF07486 Cell Wall Hydrolase MC28_RS14495 PF00884 Sulfatase MC28_RS14510 PF01119 DNA mismatch repair protein, C-terminal domain MC28_RS14510 PF08676 MutL C terminal dimerisation domain MC28_RS14515 PF05192 MutS domain III MC28_RS14515 PF05190 MutS family domain IV MC28_RS14515 PF00488 MutS domain V MC28_RS14515 PF01624 MutS domain I MC28_RS14515 PF05188 MutS domain II MC28_RS14520 PF10628 Outer spore coat protein E (CotE) MC28_RS14525 PF06133 Control of competence regulator ComK, YlbF/YmcA MC28_RS14530 PF04055 Radical SAM superfamily MC28_RS14530 PF01938 TRAM domain MC28_RS14530 PF00919 Uncharacterized protein family UPF0004 MC28_RS14535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MC28_RS14540 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MC28_RS14540 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MC28_RS14540 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase MC28_RS14545 PF01244 Membrane dipeptidase (Peptidase family M19) MC28_RS14550 PF04232 Stage V sporulation protein S (SpoVS) MC28_RS14555 PF13277 YmdB-like protein MC28_RS14560 PF00013 KH domain MC28_RS14560 PF12072 Domain of unknown function (DUF3552) MC28_RS14560 PF01966 HD domain MC28_RS14580 PF00154 recA bacterial DNA recombination protein MC28_RS14585 PF18146 Damage-inducible protein CinA KH domain MC28_RS14585 PF02464 Competence-damaged protein MC28_RS14585 PF00994 Probable molybdopterin binding domain MC28_RS14590 PF01066 CDP-alcohol phosphatidyltransferase MC28_RS14595 PF13464 Domain of unknown function (DUF4115) MC28_RS14600 PF11868 Protein of unknown function (DUF3388) MC28_RS14605 PF11588 Protein of unknown function (DUF3243) MC28_RS14615 PF00675 Insulinase (Peptidase family M16) MC28_RS14615 PF05193 Peptidase M16 inactive domain MC28_RS14620 PF05193 Peptidase M16 inactive domain MC28_RS14625 PF02653 Branched-chain amino acid transport system / permease component MC28_RS14630 PF02653 Branched-chain amino acid transport system / permease component MC28_RS14635 PF00005 ABC transporter MC28_RS14640 PF02608 ABC transporter substrate-binding protein PnrA-like MC28_RS14645 PF00392 Bacterial regulatory proteins, gntR family MC28_RS14645 PF07702 UTRA domain MC28_RS14650 PF09397 Ftsk gamma domain MC28_RS14650 PF17854 FtsK alpha domain MC28_RS14650 PF01580 FtsK/SpoIIIE family MC28_RS14655 PF14035 YlzJ-like protein MC28_RS14660 PF00574 Clp protease MC28_RS14665 PF00753 Metallo-beta-lactamase superfamily MC28_RS14665 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MC28_RS14665 PF17770 Ribonuclease J C-terminal domain MC28_RS14670 PF00701 Dihydrodipicolinate synthetase family MC28_RS14675 PF00696 Amino acid kinase family MC28_RS14675 PF13840 ACT domain MC28_RS14680 PF01118 Semialdehyde dehydrogenase, NAD binding domain MC28_RS14680 PF02774 Semialdehyde dehydrogenase, dimerisation domain MC28_RS14685 PF02441 Flavoprotein MC28_RS14705 PF11799 impB/mucB/samB family C-terminal domain MC28_RS14705 PF00817 impB/mucB/samB family MC28_RS14705 PF11798 IMS family HHH motif MC28_RS14735 PF01510 N-acetylmuramoyl-L-alanine amidase MC28_RS14805 PF00574 Clp protease MC28_RS14845 PF06725 3D domain MC28_RS14845 PF01476 LysM domain MC28_RS14855 PF00589 Phage integrase family MC28_RS14895 PF00772 DnaB-like helicase N terminal domain MC28_RS14895 PF03796 DnaB-like helicase C terminal domain MC28_RS14930 PF01381 Helix-turn-helix MC28_RS14950 PF02441 Flavoprotein MC28_RS14955 PF16924 Dipicolinate synthase subunit A N-terminal domain MC28_RS14955 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MC28_RS14960 PF05239 PRC-barrel domain MC28_RS14965 PF05193 Peptidase M16 inactive domain MC28_RS14965 PF00675 Insulinase (Peptidase family M16) MC28_RS14970 PF01522 Polysaccharide deacetylase MC28_RS14975 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MC28_RS14975 PF03725 3' exoribonuclease family, domain 2 MC28_RS14975 PF01138 3' exoribonuclease family, domain 1 MC28_RS14975 PF00575 S1 RNA binding domain MC28_RS14975 PF00013 KH domain MC28_RS14980 PF00312 Ribosomal protein S15 MC28_RS14985 PF06574 FAD synthetase MC28_RS14985 PF01687 Riboflavin kinase MC28_RS14990 PF01509 TruB family pseudouridylate synthase (N terminal domain) MC28_RS14990 PF16198 tRNA pseudouridylate synthase B C-terminal domain MC28_RS14995 PF02033 Ribosome-binding factor A MC28_RS15005 PF04760 Translation initiation factor IF-2, N-terminal region MC28_RS15005 PF00009 Elongation factor Tu GTP binding domain MC28_RS15005 PF11987 Translation-initiation factor 2 MC28_RS15010 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family MC28_RS15015 PF04296 Protein of unknown function (DUF448) MC28_RS15020 PF00575 S1 RNA binding domain MC28_RS15020 PF08529 NusA N-terminal domain MC28_RS15020 PF13184 NusA-like KH domain MC28_RS15025 PF17384 RimP C-terminal SH3 domain MC28_RS15025 PF02576 RimP N-terminal domain MC28_RS15030 PF00929 Exonuclease MC28_RS15030 PF11490 DNA polymerase III polC-type N-terminus II MC28_RS15030 PF07733 Bacterial DNA polymerase III alpha NTPase domain MC28_RS15030 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MC28_RS15030 PF14579 Helix-hairpin-helix motif MC28_RS15030 PF14480 DNA polymerase III polC-type N-terminus I MC28_RS15030 PF02811 PHP domain MC28_RS15035 PF04073 Aminoacyl-tRNA editing domain MC28_RS15035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MC28_RS15035 PF03129 Anticodon binding domain MC28_RS15040 PF02163 Peptidase family M50 MC28_RS15040 PF17820 PDZ domain MC28_RS15045 PF13288 DXP reductoisomerase C-terminal domain MC28_RS15045 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MC28_RS15045 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MC28_RS15055 PF01255 Putative undecaprenyl diphosphate synthase MC28_RS15060 PF01765 Ribosome recycling factor MC28_RS15065 PF00696 Amino acid kinase family MC28_RS15070 PF00889 Elongation factor TS MC28_RS15075 PF00318 Ribosomal protein S2 MC28_RS15080 PF06018 CodY GAF-like domain MC28_RS15080 PF08222 CodY helix-turn-helix domain MC28_RS15085 PF10431 C-terminal, D2-small domain, of ClpB protein MC28_RS15085 PF07724 AAA domain (Cdc48 subfamily) MC28_RS15085 PF00004 ATPase family associated with various cellular activities (AAA) MC28_RS15090 PF00227 Proteasome subunit MC28_RS15095 PF00589 Phage integrase family MC28_RS15095 PF02899 Phage integrase, N-terminal SAM-like domain MC28_RS15100 PF01134 Glucose inhibited division protein A MC28_RS15105 PF01131 DNA topoisomerase MC28_RS15105 PF01396 Topoisomerase DNA binding C4 zinc finger MC28_RS15105 PF01751 Toprim domain MC28_RS15110 PF02481 DNA recombination-mediator protein A MC28_RS15115 PF02629 CoA binding domain MC28_RS15115 PF00549 CoA-ligase MC28_RS15120 PF08442 ATP-grasp domain MC28_RS15120 PF00549 CoA-ligase MC28_RS15125 PF01351 Ribonuclease HII MC28_RS15130 PF01926 50S ribosome-binding GTPase MC28_RS15135 PF10502 Signal peptidase, peptidase S26 MC28_RS15140 PF01245 Ribosomal protein L19 MC28_RS15145 PF01746 tRNA (Guanine-1)-methyltransferase MC28_RS15150 PF01782 RimM N-terminal domain MC28_RS15150 PF05239 PRC-barrel domain MC28_RS15160 PF00886 Ribosomal protein S16 MC28_RS15165 PF02881 SRP54-type protein, helical bundle domain MC28_RS15165 PF00448 SRP54-type protein, GTPase domain MC28_RS15165 PF02978 Signal peptide binding domain MC28_RS15170 PF04297 Putative helix-turn-helix protein, YlxM / p13 like MC28_RS15175 PF02881 SRP54-type protein, helical bundle domain MC28_RS15175 PF00448 SRP54-type protein, GTPase domain MC28_RS15180 PF06470 SMC proteins Flexible Hinge Domain MC28_RS15180 PF02463 RecF/RecN/SMC N terminal domain MC28_RS15185 PF14622 Ribonuclease-III-like MC28_RS15185 PF00035 Double-stranded RNA binding motif MC28_RS15190 PF00550 Phosphopantetheine attachment site MC28_RS15200 PF00698 Acyl transferase domain MC28_RS15205 PF02504 Fatty acid synthesis protein MC28_RS15210 PF03061 Thioesterase superfamily MC28_RS15215 PF17191 RecG wedge domain MC28_RS15215 PF00271 Helicase conserved C-terminal domain MC28_RS15215 PF00270 DEAD/DEAH box helicase MC28_RS15220 PF13684 Dihydroxyacetone kinase family MC28_RS15220 PF02734 DAK2 domain MC28_RS15225 PF03780 Asp23 family, cell envelope-related function MC28_RS15230 PF00830 Ribosomal L28 family MC28_RS15235 PF08183 Stage V sporulation protein family MC28_RS15240 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain MC28_RS15240 PF04263 Thiamin pyrophosphokinase, catalytic domain MC28_RS15245 PF00834 Ribulose-phosphate 3 epimerase family MC28_RS15250 PF16745 RsgA N-terminal domain MC28_RS15250 PF03193 RsgA GTPase MC28_RS15255 PF00069 Protein kinase domain MC28_RS15255 PF03793 PASTA domain MC28_RS15265 PF04055 Radical SAM superfamily MC28_RS15270 PF01189 16S rRNA methyltransferase RsmB/F MC28_RS15270 PF01029 NusB family MC28_RS15275 PF00551 Formyl transferase MC28_RS15275 PF02911 Formyl transferase, C-terminal domain MC28_RS15280 PF01327 Polypeptide deformylase MC28_RS15285 PF00271 Helicase conserved C-terminal domain MC28_RS15285 PF17764 3′ DNA-binding domain (3′BD) MC28_RS15285 PF18074 Primosomal protein N C-terminal domain MC28_RS15285 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MC28_RS15285 PF04851 Type III restriction enzyme, res subunit MC28_RS15290 PF04127 DNA / pantothenate metabolism flavoprotein MC28_RS15290 PF02441 Flavoprotein MC28_RS15295 PF01192 RNA polymerase Rpb6 MC28_RS15300 PF00625 Guanylate kinase MC28_RS15305 PF04025 Domain of unknown function (DUF370) MC28_RS15310 PF08340 Domain of unknown function (DUF1732) MC28_RS15310 PF03755 YicC-like family, N-terminal region MC28_RS15315 PF00690 Cation transporter/ATPase, N-terminus MC28_RS15315 PF00689 Cation transporting ATPase, C-terminus MC28_RS15320 PF05670 NFACT protein RNA binding domain MC28_RS15325 PF01321 Creatinase/Prolidase N-terminal domain MC28_RS15325 PF00557 Metallopeptidase family M24 MC28_RS15355 PF00156 Phosphoribosyl transferase domain MC28_RS15360 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MC28_RS15365 PF01180 Dihydroorotate dehydrogenase MC28_RS15370 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B MC28_RS15375 PF02142 MGS-like domain MC28_RS15375 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MC28_RS15375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MC28_RS15380 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MC28_RS15380 PF00117 Glutamine amidotransferase class-I MC28_RS15385 PF01979 Amidohydrolase family MC28_RS15390 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MC28_RS15390 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MC28_RS15395 PF00860 Permease family MC28_RS15400 PF00156 Phosphoribosyl transferase domain MC28_RS15405 PF01479 S4 domain MC28_RS15405 PF00849 RNA pseudouridylate synthase MC28_RS15410 PF01252 Signal peptidase (SPase) II MC28_RS15420 PF08264 Anticodon-binding domain of tRNA MC28_RS15420 PF06827 Zinc finger found in FPG and IleRS MC28_RS15420 PF00133 tRNA synthetases class I (I, L, M and V) MC28_RS15425 PF05103 DivIVA protein MC28_RS15430 PF01479 S4 domain MC28_RS15430 PF17774 Putative RNA-binding domain in YlmH MC28_RS15435 PF02325 YGGT family MC28_RS15440 PF04472 Cell division protein SepF MC28_RS15445 PF01168 Alanine racemase, N-terminal domain MC28_RS15450 PF02578 Multi-copper polyphenol oxidoreductase laccase MC28_RS15455 PF05239 PRC-barrel domain MC28_RS15460 PF04545 Sigma-70, region 4 MC28_RS15460 PF04539 Sigma-70 region 3 MC28_RS15460 PF04542 Sigma-70 region 2 MC28_RS15465 PF04545 Sigma-70, region 4 MC28_RS15465 PF04542 Sigma-70 region 2 MC28_RS15470 PF03419 Sporulation factor SpoIIGA MC28_RS15475 PF12327 FtsZ family, C-terminal domain MC28_RS15475 PF00091 Tubulin/FtsZ family, GTPase domain MC28_RS15480 PF02491 SHS2 domain inserted in FTSA MC28_RS15485 PF03799 Cell division protein FtsQ MC28_RS15485 PF08478 POTRA domain, FtsQ-type MC28_RS15490 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MC28_RS15490 PF01565 FAD binding domain MC28_RS15495 PF03033 Glycosyltransferase family 28 N-terminal domain MC28_RS15495 PF04101 Glycosyltransferase family 28 C-terminal domain MC28_RS15500 PF01098 Cell cycle protein MC28_RS15505 PF08245 Mur ligase middle domain MC28_RS15505 PF02875 Mur ligase family, glutamate ligase domain MC28_RS15510 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MC28_RS15510 PF00953 Glycosyl transferase family 4 MC28_RS15515 PF08245 Mur ligase middle domain MC28_RS15515 PF01225 Mur ligase family, catalytic domain MC28_RS15515 PF02875 Mur ligase family, glutamate ligase domain MC28_RS15520 PF03717 Penicillin-binding Protein dimerisation domain MC28_RS15520 PF00905 Penicillin binding protein transpeptidase domain MC28_RS15520 PF03793 PASTA domain MC28_RS15525 PF00905 Penicillin binding protein transpeptidase domain MC28_RS15525 PF03793 PASTA domain MC28_RS15525 PF03717 Penicillin-binding Protein dimerisation domain MC28_RS15530 PF04977 Septum formation initiator MC28_RS15535 PF01795 MraW methylase family MC28_RS15540 PF10079 Bacillithiol biosynthesis BshC MC28_RS15545 PF02558 Ketopantoate reductase PanE/ApbA MC28_RS15545 PF08546 Ketopantoate reductase PanE/ApbA C terminal MC28_RS15550 PF00583 Acetyltransferase (GNAT) family MC28_RS15560 PF01783 Ribosomal L32p protein family MC28_RS15565 PF02620 Large ribosomal RNA subunit accumulation protein YceD MC28_RS15610 PF05105 Bacteriophage holin family MC28_RS15695 PF00574 Clp protease MC28_RS15705 PF03354 Phage Terminase MC28_RS15740 PF00589 Phage integrase family MC28_RS15830 PF18277 AbrB C-terminal domain MC28_RS15830 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin MC28_RS15855 PF01381 Helix-turn-helix MC28_RS15885 PF00589 Phage integrase family MC28_RS15885 PF14659 Phage integrase, N-terminal SAM-like domain MC28_RS15890 PF05636 HIGH Nucleotidyl Transferase MC28_RS15895 PF13180 PDZ domain MC28_RS15895 PF05362 Lon protease (S16) C-terminal proteolytic domain MC28_RS15900 PF01734 Patatin-like phospholipase MC28_RS15905 PF07670 Nucleoside recognition MC28_RS15910 PF01467 Cytidylyltransferase-like MC28_RS15925 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) MC28_RS15930 PF06133 Control of competence regulator ComK, YlbF/YmcA MC28_RS15935 PF00300 Histidine phosphatase superfamily (branch 1) MC28_RS15940 PF14003 YlbE-like protein MC28_RS15945 PF14071 Putative coat protein MC28_RS15950 PF14504 CAP-associated N-terminal MC28_RS15950 PF00188 Cysteine-rich secretory protein family MC28_RS15955 PF08868 YugN-like family MC28_RS15960 PF00795 Carbon-nitrogen hydrolase MC28_RS15965 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) MC28_RS15970 PF03626 Prokaryotic Cytochrome C oxidase subunit IV MC28_RS15975 PF00510 Cytochrome c oxidase subunit III MC28_RS15980 PF00115 Cytochrome C and Quinol oxidase polypeptide I MC28_RS15985 PF00034 Cytochrome c MC28_RS15985 PF02790 Cytochrome C oxidase subunit II, transmembrane domain MC28_RS15985 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MC28_RS15990 PF01040 UbiA prenyltransferase family MC28_RS15995 PF02628 Cytochrome oxidase assembly protein MC28_RS16000 PF00289 Biotin carboxylase, N-terminal domain MC28_RS16000 PF00364 Biotin-requiring enzyme MC28_RS16000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MC28_RS16000 PF00682 HMGL-like MC28_RS16000 PF02436 Conserved carboxylase domain MC28_RS16000 PF02785 Biotin carboxylase C-terminal domain MC28_RS16005 PF01098 Cell cycle protein MC28_RS16010 PF07408 Protein of unknown function (DUF1507) MC28_RS16020 PF13638 PIN domain MC28_RS16020 PF02562 PhoH-like protein MC28_RS16030 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) MC28_RS16040 PF14036 YlaH-like protein MC28_RS16045 PF00009 Elongation factor Tu GTP binding domain MC28_RS16045 PF14492 Elongation Factor G, domain II MC28_RS16045 PF00679 Elongation factor G C-terminus MC28_RS16045 PF03144 Elongation factor Tu domain 2 MC28_RS16055 PF00459 Inositol monophosphatase family MC28_RS16065 PF06335 Protein of unknown function (DUF1054) MC28_RS16070 PF05256 Uncharacterised protein family (UPF0223) MC28_RS16075 PF01276 Orn/Lys/Arg decarboxylase, major domain MC28_RS16075 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain MC28_RS16115 PF03062 MBOAT, membrane-bound O-acyltransferase family MC28_RS16125 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC28_RS16125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MC28_RS16130 PF00364 Biotin-requiring enzyme MC28_RS16130 PF02817 e3 binding domain MC28_RS16130 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MC28_RS16135 PF02779 Transketolase, pyrimidine binding domain MC28_RS16135 PF02780 Transketolase, C-terminal domain MC28_RS16140 PF00676 Dehydrogenase E1 component MC28_RS16150 PF01327 Polypeptide deformylase MC28_RS16160 PF07288 Protein of unknown function (DUF1447) MC28_RS16165 PF17770 Ribonuclease J C-terminal domain MC28_RS16165 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MC28_RS16165 PF00753 Metallo-beta-lactamase superfamily MC28_RS16170 PF02254 TrkA-N domain MC28_RS16170 PF02080 TrkA-C domain MC28_RS16180 PF07687 Peptidase dimerisation domain MC28_RS16180 PF01546 Peptidase family M20/M25/M40 MC28_RS16185 PF14602 Hexapeptide repeat of succinyl-transferase MC28_RS16185 PF00132 Bacterial transferase hexapeptide (six repeats) MC28_RS16185 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal MC28_RS16190 PF03466 LysR substrate binding domain MC28_RS16190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC28_RS16205 PF04308 Ribonuclease H-like MC28_RS16215 PF08796 Protein of unknown function (DUF1797) MC28_RS16235 PF10388 EAL-domain associated signalling protein domain MC28_RS16235 PF00563 EAL domain MC28_RS16245 PF00149 Calcineurin-like phosphoesterase MC28_RS16245 PF10518 TAT (twin-arginine translocation) pathway signal sequence MC28_RS16255 PF17941 Polyphosphate kinase C-terminal domain 1 MC28_RS16255 PF13089 Polyphosphate kinase N-terminal domain MC28_RS16255 PF13090 Polyphosphate kinase C-terminal domain 2 MC28_RS16255 PF02503 Polyphosphate kinase middle domain MC28_RS16260 PF02541 Ppx/GppA phosphatase family MC28_RS16265 PF14177 YkyB-like protein MC28_RS16290 PF07690 Major Facilitator Superfamily MC28_RS16300 PF01717 Cobalamin-independent synthase, Catalytic domain MC28_RS16300 PF08267 Cobalamin-independent synthase, N-terminal domain MC28_RS16310 PF14040 Deoxyribonuclease NucA/NucB MC28_RS16320 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS16320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS16330 PF00155 Aminotransferase class I and II MC28_RS16335 PF00356 Bacterial regulatory proteins, lacI family MC28_RS16335 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MC28_RS16340 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS16345 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS16350 PF13416 Bacterial extracellular solute-binding protein MC28_RS16355 PF00128 Alpha amylase, catalytic domain MC28_RS16355 PF02903 Alpha amylase, N-terminal ig-like domain MC28_RS16355 PF16657 Maltogenic Amylase, C-terminal domain MC28_RS16360 PF16657 Maltogenic Amylase, C-terminal domain MC28_RS16360 PF00128 Alpha amylase, catalytic domain MC28_RS16365 PF17912 MalK OB fold domain MC28_RS16365 PF00005 ABC transporter MC28_RS16365 PF03459 TOBE domain MC28_RS16405 PF02803 Thiolase, C-terminal domain MC28_RS16405 PF00108 Thiolase, N-terminal domain MC28_RS16410 PF00293 NUDIX domain MC28_RS16435 PF03551 Transcriptional regulator PadR-like family MC28_RS16450 PF01008 Initiation factor 2 subunit family MC28_RS16455 PF01636 Phosphotransferase enzyme family MC28_RS16460 PF00795 Carbon-nitrogen hydrolase MC28_RS16465 PF00155 Aminotransferase class I and II MC28_RS16470 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain MC28_RS16470 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain MC28_RS16480 PF00596 Class II Aldolase and Adducin N-terminal domain MC28_RS16485 PF03079 ARD/ARD' family MC28_RS16500 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MC28_RS16500 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MC28_RS16505 PF00144 Beta-lactamase MC28_RS16510 PF08448 PAS fold MC28_RS16510 PF00990 Diguanylate cyclase, GGDEF domain MC28_RS16515 PF00881 Nitroreductase family MC28_RS16530 PF02896 PEP-utilising enzyme, TIM barrel domain MC28_RS16530 PF05524 PEP-utilising enzyme, N-terminal MC28_RS16530 PF00391 PEP-utilising enzyme, mobile domain MC28_RS16535 PF00381 PTS HPr component phosphorylation site MC28_RS16540 PF00367 phosphotransferase system, EIIB MC28_RS16540 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MC28_RS16540 PF02378 Phosphotransferase system, EIIC MC28_RS16545 PF00874 PRD domain MC28_RS16545 PF03123 CAT RNA binding domain MC28_RS16555 PF00392 Bacterial regulatory proteins, gntR family MC28_RS16555 PF07702 UTRA domain MC28_RS16560 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MC28_RS16565 PF01979 Amidohydrolase family MC28_RS16575 PF04079 Segregation and condensation complex subunit ScpB MC28_RS16580 PF02616 Segregation and condensation protein ScpA MC28_RS16585 PF03745 Domain of unknown function (DUF309) MC28_RS16590 PF00583 Acetyltransferase (GNAT) family MC28_RS16595 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MC28_RS16600 PF06207 Protein of unknown function (DUF1002) MC28_RS16610 PF03323 Bacillus/Clostridium GerA spore germination protein MC28_RS16615 PF14097 Stage V sporulation protein AE1 MC28_RS16620 PF03862 SpoVAC/SpoVAEB sporulation membrane protein MC28_RS16625 PF07451 Stage V sporulation protein AD (SpoVAD) MC28_RS16630 PF03862 SpoVAC/SpoVAEB sporulation membrane protein MC28_RS16635 PF13782 Stage V sporulation protein AB MC28_RS16640 PF12164 Stage V sporulation protein AA MC28_RS16650 PF00209 Sodium:neurotransmitter symporter family MC28_RS16655 PF04545 Sigma-70, region 4 MC28_RS16655 PF04539 Sigma-70 region 3 MC28_RS16655 PF04542 Sigma-70 region 2 MC28_RS16660 PF13581 Histidine kinase-like ATPase domain MC28_RS16665 PF01740 STAS domain MC28_RS16670 PF00768 D-alanyl-D-alanine carboxypeptidase MC28_RS16670 PF07943 Penicillin-binding protein 5, C-terminal domain MC28_RS16675 PF00392 Bacterial regulatory proteins, gntR family MC28_RS16680 PF00005 ABC transporter MC28_RS16700 PF01047 MarR family MC28_RS16710 PF00860 Permease family MC28_RS16715 PF01544 CorA-like Mg2+ transporter protein MC28_RS16720 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain MC28_RS16720 PF00591 Glycosyl transferase family, a/b domain MC28_RS16720 PF02885 Glycosyl transferase family, helical bundle domain MC28_RS16725 PF01048 Phosphorylase superfamily MC28_RS16730 PF01676 Metalloenzyme superfamily MC28_RS16735 PF13115 YtkA-like MC28_RS16740 PF02899 Phage integrase, N-terminal SAM-like domain MC28_RS16740 PF00589 Phage integrase family MC28_RS16745 PF14004 Protein of unknown function (DUF4227) MC28_RS16750 PF01475 Ferric uptake regulator family MC28_RS16755 PF01944 Stage II sporulation protein M MC28_RS16765 PF00293 NUDIX domain MC28_RS16770 PF13072 Mother cell inhibitor of FtsZ MC28_RS16775 PF00248 Aldo/keto reductase family MC28_RS16780 PF00248 Aldo/keto reductase family MC28_RS16785 PF13673 Acetyltransferase (GNAT) domain MC28_RS16785 PF04229 GrpB protein MC28_RS16795 PF00746 LPXTG cell wall anchor motif MC28_RS16795 PF00565 Staphylococcal nuclease homologue MC28_RS16795 PF00149 Calcineurin-like phosphoesterase MC28_RS16795 PF02872 5'-nucleotidase, C-terminal domain MC28_RS16805 PF12146 Serine aminopeptidase, S33 MC28_RS16810 PF03553 Na+/H+ antiporter family MC28_RS16810 PF13726 Na+-H+ antiporter family MC28_RS16815 PF00356 Bacterial regulatory proteins, lacI family MC28_RS16820 PF00583 Acetyltransferase (GNAT) family MC28_RS16825 PF12146 Serine aminopeptidase, S33 MC28_RS16830 PF10827 Protein of unknown function (DUF2552) MC28_RS16840 PF01872 RibD C-terminal domain MC28_RS16840 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MC28_RS16845 PF00677 Lumazine binding domain MC28_RS16850 PF00925 GTP cyclohydrolase II MC28_RS16850 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MC28_RS16855 PF00885 6,7-dimethyl-8-ribityllumazine synthase MC28_RS16865 PF06968 Biotin and Thiamin Synthesis associated domain MC28_RS16865 PF04055 Radical SAM superfamily MC28_RS16870 PF13847 Methyltransferase domain MC28_RS16875 PF12697 Alpha/beta hydrolase family MC28_RS16875 PF08241 Methyltransferase domain MC28_RS16880 PF00155 Aminotransferase class I and II MC28_RS16890 PF00202 Aminotransferase class-III MC28_RS16900 PF03553 Na+/H+ antiporter family MC28_RS16905 PF02872 5'-nucleotidase, C-terminal domain MC28_RS16905 PF00149 Calcineurin-like phosphoesterase MC28_RS16915 PF13404 AsnC-type helix-turn-helix domain MC28_RS16915 PF01037 Lrp/AsnC ligand binding domain MC28_RS16930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MC28_RS16930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MC28_RS16935 PF00202 Aminotransferase class-III MC28_RS16940 PF00696 Amino acid kinase family MC28_RS16945 PF01960 ArgJ family MC28_RS16950 PF01118 Semialdehyde dehydrogenase, NAD binding domain MC28_RS16950 PF02774 Semialdehyde dehydrogenase, dimerisation domain MC28_RS16960 PF00106 short chain dehydrogenase MC28_RS16965 PF00753 Metallo-beta-lactamase superfamily MC28_RS16970 PF14748 Pyrroline-5-carboxylate reductase dimerisation MC28_RS16970 PF03807 NADP oxidoreductase coenzyme F420-dependent MC28_RS16975 PF03313 Serine dehydratase alpha chain MC28_RS16980 PF01842 ACT domain MC28_RS16980 PF03315 Serine dehydratase beta chain MC28_RS16995 PF12706 Beta-lactamase superfamily domain MC28_RS16995 PF00753 Metallo-beta-lactamase superfamily MC28_RS17005 PF00690 Cation transporter/ATPase, N-terminus MC28_RS17005 PF00689 Cation transporting ATPase, C-terminus MC28_RS17010 PF02308 MgtC family MC28_RS17015 PF11798 IMS family HHH motif MC28_RS17015 PF11799 impB/mucB/samB family C-terminal domain MC28_RS17015 PF00817 impB/mucB/samB family MC28_RS17020 PF07687 Peptidase dimerisation domain MC28_RS17020 PF01546 Peptidase family M20/M25/M40 MC28_RS17025 PF13302 Acetyltransferase (GNAT) domain MC28_RS17035 PF03734 L,D-transpeptidase catalytic domain MC28_RS17040 PF06081 Aromatic acid exporter family member 1 MC28_RS17040 PF11728 Putative aromatic acid exporter C-terminal domain MC28_RS17045 PF00005 ABC transporter MC28_RS17050 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS17055 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC28_RS17060 PF06491 Disulphide isomerase MC28_RS17065 PF11208 Protein of unknown function (DUF2992) MC28_RS17070 PF00293 NUDIX domain MC28_RS17070 PF09297 NADH pyrophosphatase zinc ribbon domain MC28_RS17075 PF04239 Protein of unknown function (DUF421) MC28_RS17080 PF01098 Cell cycle protein MC28_RS17085 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MC28_RS17085 PF00364 Biotin-requiring enzyme MC28_RS17085 PF02817 e3 binding domain MC28_RS17090 PF02779 Transketolase, pyrimidine binding domain MC28_RS17090 PF02780 Transketolase, C-terminal domain MC28_RS17095 PF00676 Dehydrogenase E1 component MC28_RS17100 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC28_RS17100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MC28_RS17105 PF00871 Acetokinase family MC28_RS17110 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MC28_RS17110 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MC28_RS17115 PF01515 Phosphate acetyl/butaryl transferase MC28_RS17120 PF00989 PAS fold MC28_RS17120 PF00158 Sigma-54 interaction domain MC28_RS17120 PF02954 Bacterial regulatory protein, Fis family MC28_RS17130 PF03009 Glycerophosphoryl diester phosphodiesterase family MC28_RS17135 PF14174 YycC-like protein MC28_RS17150 PF08769 Sporulation initiation factor Spo0A C terminal MC28_RS17150 PF00072 Response regulator receiver domain MC28_RS17155 PF05580 SpoIVB peptidase S55 MC28_RS17155 PF17820 PDZ domain MC28_RS17160 PF13476 AAA domain MC28_RS17165 PF01316 Arginine repressor, DNA binding domain MC28_RS17165 PF02863 Arginine repressor, C-terminal domain MC28_RS17170 PF01479 S4 domain MC28_RS17170 PF01728 FtsJ-like methyltransferase MC28_RS17175 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MC28_RS17175 PF02779 Transketolase, pyrimidine binding domain MC28_RS17175 PF02780 Transketolase, C-terminal domain MC28_RS17180 PF00348 Polyprenyl synthetase MC28_RS17185 PF02609 Exonuclease VII small subunit MC28_RS17190 PF02601 Exonuclease VII, large subunit MC28_RS17190 PF13742 OB-fold nucleic acid binding domain MC28_RS17195 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MC28_RS17195 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MC28_RS17200 PF01029 NusB family MC28_RS17205 PF03780 Asp23 family, cell envelope-related function MC28_RS17210 PF02785 Biotin carboxylase C-terminal domain MC28_RS17210 PF00289 Biotin carboxylase, N-terminal domain MC28_RS17210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MC28_RS17215 PF00364 Biotin-requiring enzyme MC28_RS17225 PF12685 SpoIIIAH-like protein MC28_RS17235 PF09581 Stage III sporulation protein AF (Spore_III_AF) MC28_RS17240 PF09546 Stage III sporulation protein AE (spore_III_AE) MC28_RS17245 PF06686 Stage III sporulation protein AC/AD protein family MC28_RS17250 PF06686 Stage III sporulation protein AC/AD protein family MC28_RS17255 PF09548 Stage III sporulation protein AB (spore_III_AB) MC28_RS17280 PF09285 Elongation factor P, C-terminal MC28_RS17280 PF08207 Elongation factor P (EF-P) KOW-like domain MC28_RS17280 PF01132 Elongation factor P (EF-P) OB domain MC28_RS17285 PF00557 Metallopeptidase family M24 MC28_RS17285 PF01321 Creatinase/Prolidase N-terminal domain MC28_RS17290 PF01220 Dehydroquinase class II MC28_RS17295 PF11085 Conserved membrane protein YqhR MC28_RS17300 PF07136 Protein of unknown function (DUF1385) MC28_RS17310 PF13419 Haloacid dehalogenase-like hydrolase MC28_RS17315 PF01325 Iron dependent repressor, N-terminal DNA binding domain MC28_RS17315 PF02742 Iron dependent repressor, metal binding and dimerisation domain MC28_RS17340 PF03099 Biotin/lipoate A/B protein ligase family MC28_RS17345 PF00581 Rhodanese-like domain MC28_RS17355 PF00356 Bacterial regulatory proteins, lacI family MC28_RS17355 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MC28_RS17365 PF00893 Small Multidrug Resistance protein MC28_RS17370 PF00893 Small Multidrug Resistance protein MC28_RS17400 PF00005 ABC transporter MC28_RS17405 PF00392 Bacterial regulatory proteins, gntR family MC28_RS17420 PF02347 Glycine cleavage system P-protein MC28_RS17425 PF02347 Glycine cleavage system P-protein MC28_RS17430 PF08669 Glycine cleavage T-protein C-terminal barrel domain MC28_RS17430 PF01571 Aminomethyltransferase folate-binding domain MC28_RS17435 PF00271 Helicase conserved C-terminal domain MC28_RS17435 PF00176 SNF2 family N-terminal domain MC28_RS17440 PF11079 Bacterial protein YqhG of unknown function MC28_RS17460 PF14038 YqzE-like protein MC28_RS17465 PF01202 Shikimate kinase MC28_RS17490 PF07963 Prokaryotic N-terminal methylation motif MC28_RS17500 PF00482 Type II secretion system (T2SS), protein F MC28_RS17505 PF00437 Type II/IV secretion system protein MC28_RS17515 PF11117 Protein of unknown function (DUF2626) MC28_RS17520 PF00375 Sodium:dicarboxylate symporter family MC28_RS17555 PF04101 Glycosyltransferase family 28 C-terminal domain MC28_RS17555 PF03033 Glycosyltransferase family 28 N-terminal domain MC28_RS17560 PF02607 B12 binding domain MC28_RS17560 PF02965 Vitamin B12 dependent methionine synthase, activation domain MC28_RS17560 PF00809 Pterin binding enzyme MC28_RS17560 PF02310 B12 binding domain MC28_RS17560 PF02574 Homocysteine S-methyltransferase MC28_RS17565 PF02219 Methylenetetrahydrofolate reductase MC28_RS17565 PF02574 Homocysteine S-methyltransferase MC28_RS17570 PF01053 Cys/Met metabolism PLP-dependent enzyme MC28_RS17575 PF01053 Cys/Met metabolism PLP-dependent enzyme MC28_RS17590 PF01022 Bacterial regulatory protein, arsR family MC28_RS17600 PF00753 Metallo-beta-lactamase superfamily MC28_RS17610 PF00480 ROK family MC28_RS17615 PF06014 Bacterial protein of unknown function (DUF910) MC28_RS17620 PF01812 5-formyltetrahydrofolate cyclo-ligase family MC28_RS17625 PF00471 Ribosomal protein L33 MC28_RS17630 PF00483 Nucleotidyl transferase MC28_RS17635 PF01895 PhoU domain MC28_RS17640 PF00005 ABC transporter MC28_RS17645 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS17650 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS17655 PF12849 PBP superfamily domain MC28_RS17660 PF03717 Penicillin-binding Protein dimerisation domain MC28_RS17660 PF00905 Penicillin binding protein transpeptidase domain MC28_RS17665 PF07690 Major Facilitator Superfamily MC28_RS17670 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MC28_RS17670 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MC28_RS17690 PF04551 GcpE protein MC28_RS17695 PF01475 Ferric uptake regulator family MC28_RS17700 PF00950 ABC 3 transport family MC28_RS17705 PF00005 ABC transporter MC28_RS17710 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) MC28_RS17710 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 MC28_RS17715 PF11116 Protein of unknown function (DUF2624) MC28_RS17720 PF01261 Xylose isomerase-like TIM barrel MC28_RS17725 PF00270 DEAD/DEAH box helicase MC28_RS17725 PF00271 Helicase conserved C-terminal domain MC28_RS17735 PF02401 LytB protein MC28_RS17740 PF01784 NIF3 (NGG1p interacting factor 3) MC28_RS17745 PF04816 tRNA (adenine(22)-N(1))-methyltransferase MC28_RS17750 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MC28_RS17755 PF00140 Sigma-70 factor, region 1.2 MC28_RS17755 PF04542 Sigma-70 region 2 MC28_RS17755 PF04539 Sigma-70 region 3 MC28_RS17755 PF03979 Sigma-70 factor, region 1.1 MC28_RS17755 PF04545 Sigma-70, region 4 MC28_RS17760 PF01807 CHC2 zinc finger MC28_RS17760 PF10410 DnaB-helicase binding domain of primase MC28_RS17760 PF08275 DNA primase catalytic core, N-terminal domain MC28_RS17765 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 MC28_RS17770 PF03618 Kinase/pyrophosphorylase MC28_RS17775 PF00571 CBS domain MC28_RS17775 PF08279 HTH domain MC28_RS17780 PF02565 Recombination protein O C terminal MC28_RS17780 PF11967 Recombination protein O N terminal MC28_RS17790 PF01926 50S ribosome-binding GTPase MC28_RS17790 PF07650 KH domain MC28_RS17795 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MC28_RS17800 PF01219 Prokaryotic diacylglycerol kinase MC28_RS17805 PF02130 Uncharacterized protein family UPF0054 MC28_RS17810 PF07698 7TM receptor with intracellular HD hydrolase MC28_RS17810 PF01966 HD domain MC28_RS17810 PF07697 7TM-HD extracellular MC28_RS17815 PF02562 PhoH-like protein MC28_RS17820 PF06898 Putative stage IV sporulation protein YqfD MC28_RS17825 PF07873 YabP family MC28_RS17830 PF09424 Yqey-like protein MC28_RS17835 PF01165 Ribosomal protein S21 MC28_RS17840 PF04055 Radical SAM superfamily MC28_RS17840 PF00919 Uncharacterized protein family UPF0004 MC28_RS17840 PF01938 TRAM domain MC28_RS17845 PF04452 RNA methyltransferase MC28_RS17855 PF01556 DnaJ C terminal domain MC28_RS17855 PF00684 DnaJ central domain MC28_RS17855 PF00226 DnaJ domain MC28_RS17860 PF00012 Hsp70 protein MC28_RS17865 PF01025 GrpE MC28_RS17870 PF01628 HrcA protein C terminal domain MC28_RS17875 PF06969 HemN C-terminal domain MC28_RS17875 PF04055 Radical SAM superfamily MC28_RS17880 PF01638 HxlR-like helix-turn-helix MC28_RS17885 PF00679 Elongation factor G C-terminus MC28_RS17885 PF00009 Elongation factor Tu GTP binding domain MC28_RS17885 PF03144 Elongation factor Tu domain 2 MC28_RS17885 PF06421 GTP-binding protein LepA C-terminus MC28_RS17895 PF03418 Germination protease MC28_RS17900 PF01649 Ribosomal protein S20 MC28_RS17905 PF06144 DNA polymerase III, delta subunit MC28_RS17910 PF14141 YqzM-like protein MC28_RS17915 PF03772 Competence protein MC28_RS17915 PF00753 Metallo-beta-lactamase superfamily MC28_RS17915 PF13567 Domain of unknown function (DUF4131) MC28_RS17920 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MC28_RS17925 PF10531 SLBB domain MC28_RS17930 PF03807 NADP oxidoreductase coenzyme F420-dependent MC28_RS17930 PF14748 Pyrroline-5-carboxylate reductase dimerisation MC28_RS17935 PF13649 Methyltransferase domain MC28_RS17945 PF01966 HD domain MC28_RS17950 PF01467 Cytidylyltransferase-like MC28_RS17955 PF01985 CRS1 / YhbY (CRM) domain MC28_RS17960 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MC28_RS17960 PF01488 Shikimate / quinate 5-dehydrogenase MC28_RS17960 PF08501 Shikimate dehydrogenase substrate binding domain MC28_RS17965 PF01926 50S ribosome-binding GTPase MC28_RS17980 PF02666 Phosphatidylserine decarboxylase MC28_RS17985 PF04542 Sigma-70 region 2 MC28_RS17985 PF04545 Sigma-70, region 4 MC28_RS18000 PF00471 Ribosomal protein L33 MC28_RS18005 PF00881 Nitroreductase family MC28_RS18010 PF04607 Region found in RelA / SpoT proteins MC28_RS18020 PF00245 Alkaline phosphatase MC28_RS18030 PF08386 TAP-like protein MC28_RS18030 PF00561 alpha/beta hydrolase fold MC28_RS18065 PF13860 FlgD Ig-like domain MC28_RS18065 PF05922 Peptidase inhibitor I9 MC28_RS18065 PF02225 PA domain MC28_RS18065 PF00082 Subtilase family MC28_RS18070 PF00351 Biopterin-dependent aromatic amino acid hydroxylase MC28_RS18080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC28_RS18085 PF07681 DoxX MC28_RS18115 PF00005 ABC transporter MC28_RS18120 PF01032 FecCD transport family MC28_RS18125 PF01497 Periplasmic binding protein MC28_RS18135 PF00171 Aldehyde dehydrogenase family MC28_RS18135 PF00465 Iron-containing alcohol dehydrogenase MC28_RS18140 PF01053 Cys/Met metabolism PLP-dependent enzyme MC28_RS18145 PF00291 Pyridoxal-phosphate dependent enzyme MC28_RS18150 PF01048 Phosphorylase superfamily MC28_RS18155 PF08241 Methyltransferase domain MC28_RS18170 PF00905 Penicillin binding protein transpeptidase domain MC28_RS18170 PF03717 Penicillin-binding Protein dimerisation domain MC28_RS18175 PF01272 Transcription elongation factor, GreA/GreB, C-term MC28_RS18175 PF03449 Transcription elongation factor, N-terminal MC28_RS18180 PF00485 Phosphoribulokinase / Uridine kinase family MC28_RS18185 PF16325 Peptidase family U32 C-terminal domain MC28_RS18185 PF01136 Peptidase family U32 MC28_RS18190 PF01136 Peptidase family U32 MC28_RS18195 PF01596 O-methyltransferase MC28_RS18200 PF02618 YceG-like family MC28_RS18205 PF06949 Protein of unknown function (DUF1292) MC28_RS18210 PF03652 Holliday junction resolvase MC28_RS18215 PF06135 IreB regulatory phosphoprotein MC28_RS18220 PF01411 tRNA synthetases class II (A) MC28_RS18220 PF02272 DHHA1 domain MC28_RS18220 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MC28_RS18230 PF01594 AI-2E family transporter MC28_RS18250 PF13538 UvrD-like helicase C-terminal domain MC28_RS18250 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain MC28_RS18250 PF14490 Helix-hairpin-helix containing domain MC28_RS18265 PF00266 Aminotransferase class-V MC28_RS18270 PF02082 Transcriptional regulator MC28_RS18275 PF05496 Holliday junction DNA helicase RuvB P-loop domain MC28_RS18275 PF16193 AAA C-terminal domain MC28_RS18275 PF12002 MgsA AAA+ ATPase C terminal MC28_RS18285 PF00899 ThiF family MC28_RS18290 PF02938 GAD domain MC28_RS18290 PF01336 OB-fold nucleic acid binding domain MC28_RS18290 PF00152 tRNA synthetases class II (D, K and N) MC28_RS18295 PF03129 Anticodon binding domain MC28_RS18295 PF13393 Histidyl-tRNA synthetase MC28_RS18315 PF02580 D-Tyr-tRNA(Tyr) deacylase MC28_RS18320 PF04607 Region found in RelA / SpoT proteins MC28_RS18320 PF02824 TGS domain MC28_RS18320 PF13291 ACT domain MC28_RS18325 PF00156 Phosphoribosyl transferase domain MC28_RS18330 PF01368 DHH family MC28_RS18330 PF17768 RecJ OB domain MC28_RS18330 PF02272 DHHA1 domain MC28_RS18330 PF10141 Single-strand DNA-specific exonuclease, C terminal domain MC28_RS18335 PF16916 Dimerisation domain of Zinc Transporter MC28_RS18335 PF01545 Cation efflux family MC28_RS18340 PF07549 SecD/SecF GG Motif MC28_RS18340 PF02355 Protein export membrane protein MC28_RS18350 PF01943 Polysaccharide biosynthesis protein MC28_RS18350 PF14667 Polysaccharide biosynthesis C-terminal domain MC28_RS18355 PF04239 Protein of unknown function (DUF421) MC28_RS18365 PF02699 Preprotein translocase subunit MC28_RS18370 PF01702 Queuine tRNA-ribosyltransferase MC28_RS18375 PF02547 Queuosine biosynthesis protein MC28_RS18380 PF11146 Protein of unknown function (DUF2905) MC28_RS18385 PF05491 RuvB C-terminal winged helix domain MC28_RS18385 PF05496 Holliday junction DNA helicase RuvB P-loop domain MC28_RS18385 PF17864 RuvB AAA lid domain MC28_RS18390 PF01330 RuvA N terminal domain MC28_RS18390 PF07499 RuvA, C-terminal domain MC28_RS18395 PF01497 Periplasmic binding protein MC28_RS18415 PF01476 LysM domain MC28_RS18420 PF02445 Quinolinate synthetase A protein MC28_RS18425 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain MC28_RS18425 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain MC28_RS18430 PF02910 Fumarate reductase flavoprotein C-term MC28_RS18430 PF00890 FAD binding domain MC28_RS18435 PF00266 Aminotransferase class-V MC28_RS18440 PF08279 HTH domain MC28_RS18440 PF02829 3H domain MC28_RS18445 PF03473 MOSC domain MC28_RS18445 PF03475 3-alpha domain MC28_RS18450 PF00800 Prephenate dehydratase MC28_RS18450 PF01842 ACT domain MC28_RS18455 PF02687 FtsX-like permease family MC28_RS18460 PF02687 FtsX-like permease family MC28_RS18465 PF00005 ABC transporter MC28_RS18470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS18475 PF00486 Transcriptional regulatory protein, C terminal MC28_RS18475 PF00072 Response regulator receiver domain MC28_RS18480 PF01926 50S ribosome-binding GTPase MC28_RS18480 PF09269 Domain of unknown function (DUF1967) MC28_RS18480 PF01018 GTP1/OBG MC28_RS18485 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MC28_RS18485 PF14682 Sporulation initiation phospho-transferase B, C-terminal MC28_RS18490 PF01016 Ribosomal L27 protein MC28_RS18495 PF04327 Cysteine protease Prp MC28_RS18500 PF00829 Ribosomal prokaryotic L21 protein MC28_RS18505 PF00575 S1 RNA binding domain MC28_RS18505 PF10150 Ribonuclease E/G family MC28_RS18510 PF02163 Peptidase family M50 MC28_RS18515 PF01551 Peptidase family M23 MC28_RS18520 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MC28_RS18525 PF03775 Septum formation inhibitor MinC, C-terminal domain MC28_RS18535 PF04085 rod shape-determining protein MreC MC28_RS18545 PF04002 RadC-like JAB domain MC28_RS18550 PF02545 Maf-like protein MC28_RS18560 PF02875 Mur ligase family, glutamate ligase domain MC28_RS18560 PF08245 Mur ligase middle domain MC28_RS18565 PF08264 Anticodon-binding domain of tRNA MC28_RS18565 PF10458 Valyl tRNA synthetase tRNA binding arm MC28_RS18565 PF00133 tRNA synthetases class I (I, L, M and V) MC28_RS18575 PF01476 LysM domain MC28_RS18580 PF00202 Aminotransferase class-III MC28_RS18585 PF00490 Delta-aminolevulinic acid dehydratase MC28_RS18590 PF02602 Uroporphyrinogen-III synthase HemD MC28_RS18595 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MC28_RS18595 PF03900 Porphobilinogen deaminase, C-terminal domain MC28_RS18600 PF01578 Cytochrome C assembly protein MC28_RS18605 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MC28_RS18605 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MC28_RS18605 PF01488 Shikimate / quinate 5-dehydrogenase MC28_RS18610 PF01047 MarR family MC28_RS18615 PF02566 OsmC-like protein MC28_RS18620 PF01926 50S ribosome-binding GTPase MC28_RS18625 PF00004 ATPase family associated with various cellular activities (AAA) MC28_RS18625 PF02190 ATP-dependent protease La (LON) substrate-binding domain MC28_RS18625 PF05362 Lon protease (S16) C-terminal proteolytic domain MC28_RS18630 PF05362 Lon protease (S16) C-terminal proteolytic domain MC28_RS18630 PF00004 ATPase family associated with various cellular activities (AAA) MC28_RS18635 PF10431 C-terminal, D2-small domain, of ClpB protein MC28_RS18635 PF06689 ClpX C4-type zinc finger MC28_RS18635 PF07724 AAA domain (Cdc48 subfamily) MC28_RS18640 PF05697 Bacterial trigger factor protein (TF) MC28_RS18640 PF05698 Bacterial trigger factor protein (TF) C-terminus MC28_RS18640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MC28_RS18650 PF11724 YvbH-like oligomerisation region MC28_RS18650 PF08000 Bacterial PH domain MC28_RS18670 PF12850 Calcineurin-like phosphoesterase superfamily domain MC28_RS18675 PF01725 Ham1 family MC28_RS18680 PF03725 3' exoribonuclease family, domain 2 MC28_RS18680 PF01138 3' exoribonuclease family, domain 1 MC28_RS18685 PF10646 Sporulation and spore germination MC28_RS18690 PF01177 Asp/Glu/Hydantoin racemase MC28_RS18695 PF07690 Major Facilitator Superfamily MC28_RS18705 PF00440 Bacterial regulatory proteins, tetR family MC28_RS18715 PF00196 Bacterial regulatory proteins, luxR family MC28_RS18720 PF00860 Permease family MC28_RS18725 PF07969 Amidohydrolase family MC28_RS18730 PF04024 PspC domain MC28_RS18735 PF07883 Cupin domain MC28_RS18735 PF01381 Helix-turn-helix MC28_RS18740 PF13536 Putative multidrug resistance efflux transporter MC28_RS18745 PF00230 Major intrinsic protein MC28_RS18750 PF02082 Transcriptional regulator MC28_RS18760 PF13732 Domain of unknown function (DUF4162) MC28_RS18760 PF00005 ABC transporter MC28_RS18765 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) MC28_RS18770 PF00691 OmpA family MC28_RS18770 PF13677 Membrane MotB of proton-channel complex MotA/MotB MC28_RS18775 PF01618 MotA/TolQ/ExbB proton channel family MC28_RS18780 PF02557 D-alanyl-D-alanine carboxypeptidase MC28_RS18785 PF03061 Thioesterase superfamily MC28_RS18790 PF13183 4Fe-4S dicluster domain MC28_RS18790 PF13085 2Fe-2S iron-sulfur cluster binding domain MC28_RS18795 PF02910 Fumarate reductase flavoprotein C-term MC28_RS18795 PF00890 FAD binding domain MC28_RS18800 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MC28_RS18805 PF10702 Protein of unknown function (DUF2507) MC28_RS18810 PF08459 UvrC Helix-hairpin-helix N-terminal MC28_RS18810 PF02151 UvrB/uvrC motif MC28_RS18810 PF01541 GIY-YIG catalytic domain MC28_RS18815 PF00085 Thioredoxin MC28_RS18820 PF01012 Electron transfer flavoprotein domain MC28_RS18820 PF00766 Electron transfer flavoprotein FAD-binding domain MC28_RS18825 PF01012 Electron transfer flavoprotein domain MC28_RS18830 PF00378 Enoyl-CoA hydratase/isomerase MC28_RS18835 PF08359 YsiA-like protein, C-terminal region MC28_RS18835 PF00440 Bacterial regulatory proteins, tetR family MC28_RS18840 PF13193 AMP-binding enzyme C-terminal domain MC28_RS18840 PF00501 AMP-binding enzyme MC28_RS18850 PF01497 Periplasmic binding protein MC28_RS18855 PF01032 FecCD transport family MC28_RS18870 PF05163 DinB family MC28_RS18895 PF00005 ABC transporter MC28_RS18900 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS18900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS18905 PF00072 Response regulator receiver domain MC28_RS18905 PF00486 Transcriptional regulatory protein, C terminal MC28_RS18915 PF09962 Uncharacterized conserved protein (DUF2196) MC28_RS18920 PF17785 PUA-like domain MC28_RS18920 PF10672 S-adenosylmethionine-dependent methyltransferase MC28_RS18925 PF03992 Antibiotic biosynthesis monooxygenase MC28_RS18930 PF04203 Sortase domain MC28_RS18935 PF00005 ABC transporter MC28_RS18940 PF01032 FecCD transport family MC28_RS18945 PF01497 Periplasmic binding protein MC28_RS18950 PF05031 Iron Transport-associated domain MC28_RS18960 PF05031 Iron Transport-associated domain MC28_RS18965 PF05525 Branched-chain amino acid transport protein MC28_RS18970 PF01479 S4 domain MC28_RS18970 PF00849 RNA pseudouridylate synthase MC28_RS18975 PF00488 MutS domain V MC28_RS18975 PF01713 Smr domain MC28_RS18980 PF02811 PHP domain MC28_RS18980 PF14716 Helix-hairpin-helix domain MC28_RS18980 PF14791 DNA polymerase beta thumb MC28_RS18985 PF02674 Colicin V production protein MC28_RS18990 PF05164 Cell division protein ZapA MC28_RS18995 PF11858 Domain of unknown function (DUF3378) MC28_RS18995 PF01351 Ribonuclease HII MC28_RS19005 PF00152 tRNA synthetases class II (D, K and N) MC28_RS19005 PF01336 OB-fold nucleic acid binding domain MC28_RS19010 PF01588 Putative tRNA binding domain MC28_RS19010 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MC28_RS19010 PF03147 Ferredoxin-fold anticodon binding domain MC28_RS19010 PF03484 tRNA synthetase B5 domain MC28_RS19010 PF03483 B3/4 domain MC28_RS19015 PF01409 tRNA synthetases class II core domain (F) MC28_RS19015 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MC28_RS19020 PF00588 SpoU rRNA Methylase family MC28_RS19020 PF08032 RNA 2'-O ribose methyltransferase substrate binding MC28_RS19025 PF14098 Small, acid-soluble spore protein I MC28_RS19030 PF01966 HD domain MC28_RS19045 PF07690 Major Facilitator Superfamily MC28_RS19055 PF00440 Bacterial regulatory proteins, tetR family MC28_RS19055 PF16859 Tetracyclin repressor-like, C-terminal domain MC28_RS19060 PF05343 M42 glutamyl aminopeptidase MC28_RS19070 PF00453 Ribosomal protein L20 MC28_RS19075 PF01632 Ribosomal protein L35 MC28_RS19080 PF05198 Translation initiation factor IF-3, N-terminal domain MC28_RS19080 PF00707 Translation initiation factor IF-3, C-terminal domain MC28_RS19085 PF02824 TGS domain MC28_RS19085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MC28_RS19085 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MC28_RS19085 PF03129 Anticodon binding domain MC28_RS19090 PF08812 YtxC-like family MC28_RS19095 PF01695 IstB-like ATP binding protein MC28_RS19095 PF07319 Primosomal protein DnaI N-terminus MC28_RS19100 PF07261 Replication initiation and membrane attachment MC28_RS19105 PF03477 ATP cone domain MC28_RS19110 PF02675 S-adenosylmethionine decarboxylase MC28_RS19115 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MC28_RS19115 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MC28_RS19120 PF01121 Dephospho-CoA kinase MC28_RS19125 PF02659 Putative manganese efflux pump MC28_RS19130 PF06827 Zinc finger found in FPG and IleRS MC28_RS19130 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MC28_RS19130 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MC28_RS19135 PF00476 DNA polymerase family A MC28_RS19135 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MC28_RS19135 PF01367 5'-3' exonuclease, C-terminal SAM fold MC28_RS19140 PF00989 PAS fold MC28_RS19140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS19140 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS19140 PF16736 Single Cache-like MC28_RS19145 PF00072 Response regulator receiver domain MC28_RS19145 PF00486 Transcriptional regulatory protein, C terminal MC28_RS19160 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MC28_RS19160 PF00056 lactate/malate dehydrogenase, NAD binding domain MC28_RS19165 PF00180 Isocitrate/isopropylmalate dehydrogenase MC28_RS19170 PF00285 Citrate synthase, C-terminal domain MC28_RS19175 PF04284 Protein of unknown function (DUF441) MC28_RS19180 PF01594 AI-2E family transporter MC28_RS19185 PF04186 FxsA cytoplasmic membrane protein MC28_RS19190 PF00224 Pyruvate kinase, barrel domain MC28_RS19190 PF00391 PEP-utilising enzyme, mobile domain MC28_RS19190 PF02887 Pyruvate kinase, alpha/beta domain MC28_RS19195 PF00365 Phosphofructokinase MC28_RS19200 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MC28_RS19205 PF01039 Carboxyl transferase domain MC28_RS19205 PF17848 Acetyl-coA carboxylase zinc finger domain MC28_RS19210 PF00392 Bacterial regulatory proteins, gntR family MC28_RS19215 PF03949 Malic enzyme, NAD binding domain MC28_RS19215 PF00390 Malic enzyme, N-terminal domain MC28_RS19220 PF07733 Bacterial DNA polymerase III alpha NTPase domain MC28_RS19220 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MC28_RS19220 PF14579 Helix-hairpin-helix motif MC28_RS19220 PF02811 PHP domain MC28_RS19220 PF01336 OB-fold nucleic acid binding domain MC28_RS19225 PF14034 Sporulation protein YtrH MC28_RS19235 PF02272 DHHA1 domain MC28_RS19235 PF01368 DHH family MC28_RS19240 PF14007 YtpI-like protein MC28_RS19250 PF00392 Bacterial regulatory proteins, gntR family MC28_RS19250 PF07085 DRTGG domain MC28_RS19250 PF00571 CBS domain MC28_RS19250 PF03061 Thioesterase superfamily MC28_RS19265 PF00557 Metallopeptidase family M24 MC28_RS19265 PF01321 Creatinase/Prolidase N-terminal domain MC28_RS19270 PF11518 Protein of unknown function (DUF3221) MC28_RS19300 PF07883 Cupin domain MC28_RS19310 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MC28_RS19310 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MC28_RS19320 PF00582 Universal stress protein family MC28_RS19325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC28_RS19345 PF14698 Argininosuccinate lyase C-terminal MC28_RS19345 PF00206 Lyase MC28_RS19350 PF00764 Arginosuccinate synthase MC28_RS19365 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) MC28_RS19365 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 MC28_RS19370 PF12787 EcsC protein family MC28_RS19385 PF00871 Acetokinase family MC28_RS19390 PF02384 N-6 DNA Methylase MC28_RS19395 PF08534 Redoxin MC28_RS19400 PF09579 Sporulation protein YtfJ (Spore_YtfJ) MC28_RS19410 PF01513 ATP-NAD kinase MC28_RS19415 PF07969 Amidohydrolase family MC28_RS19425 PF13193 AMP-binding enzyme C-terminal domain MC28_RS19425 PF00501 AMP-binding enzyme MC28_RS19430 PF00269 Small, acid-soluble spore proteins, alpha/beta type MC28_RS19435 PF02926 THUMP domain MC28_RS19435 PF02568 Thiamine biosynthesis protein (ThiI) MC28_RS19440 PF00266 Aminotransferase class-V MC28_RS19445 PF06160 Septation ring formation regulator, EzrA MC28_RS19450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC28_RS19450 PF03466 LysR substrate binding domain MC28_RS19455 PF00892 EamA-like transporter family MC28_RS19460 PF00440 Bacterial regulatory proteins, tetR family MC28_RS19465 PF13185 GAF domain MC28_RS19470 PF01053 Cys/Met metabolism PLP-dependent enzyme MC28_RS19475 PF00163 Ribosomal protein S4/S9 N-terminal domain MC28_RS19475 PF01479 S4 domain MC28_RS19495 PF01479 S4 domain MC28_RS19495 PF00579 tRNA synthetases class I (W and Y) MC28_RS19505 PF04542 Sigma-70 region 2 MC28_RS19505 PF08281 Sigma-70, region 4 MC28_RS19515 PF14602 Hexapeptide repeat of succinyl-transferase MC28_RS19515 PF12464 Maltose acetyltransferase MC28_RS19520 PF00501 AMP-binding enzyme MC28_RS19520 PF13193 AMP-binding enzyme C-terminal domain MC28_RS19525 PF00583 Acetyltransferase (GNAT) family MC28_RS19530 PF00571 CBS domain MC28_RS19535 PF00850 Histone deacetylase domain MC28_RS19550 PF00486 Transcriptional regulatory protein, C terminal MC28_RS19550 PF00072 Response regulator receiver domain MC28_RS19555 PF00672 HAMP domain MC28_RS19555 PF13426 PAS domain MC28_RS19555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS19555 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS19560 PF12796 Ankyrin repeats (3 copies) MC28_RS19565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MC28_RS19570 PF01741 Large-conductance mechanosensitive channel, MscL MC28_RS19590 PF00356 Bacterial regulatory proteins, lacI family MC28_RS19595 PF00793 DAHP synthetase I family MC28_RS19595 PF01817 Chorismate mutase type II MC28_RS19600 PF07537 CamS sex pheromone cAM373 precursor MC28_RS19605 PF11009 Protein of unknown function (DUF2847) MC28_RS19615 PF02073 Thermophilic metalloprotease (M29) MC28_RS19635 PF00892 EamA-like transporter family MC28_RS19640 PF13411 MerR HTH family regulatory protein MC28_RS19645 PF08245 Mur ligase middle domain MC28_RS19645 PF02875 Mur ligase family, glutamate ligase domain MC28_RS19645 PF01225 Mur ligase family, catalytic domain MC28_RS19655 PF09397 Ftsk gamma domain MC28_RS19655 PF01580 FtsK/SpoIIIE family MC28_RS19655 PF17854 FtsK alpha domain MC28_RS19660 PF01476 LysM domain MC28_RS19660 PF01520 N-acetylmuramoyl-L-alanine amidase MC28_RS19670 PF01588 Putative tRNA binding domain MC28_RS19670 PF14794 Domain of unknown function (DUF4479) MC28_RS19675 PF07285 Protein of unknown function (DUF1444) MC28_RS19680 PF00085 Thioredoxin MC28_RS19685 PF01931 Protein of unknown function DUF84 MC28_RS19690 PF05343 M42 glutamyl aminopeptidase MC28_RS19700 PF00753 Metallo-beta-lactamase superfamily MC28_RS19705 PF02390 Putative methyltransferase MC28_RS19710 PF14165 YtzH-like protein MC28_RS19715 PF01636 Phosphotransferase enzyme family MC28_RS19720 PF17999 Pullulanase N1-terminal domain MC28_RS19720 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MC28_RS19720 PF00128 Alpha amylase, catalytic domain MC28_RS19725 PF02834 LigT like Phosphoesterase MC28_RS19730 PF01546 Peptidase family M20/M25/M40 MC28_RS19735 PF08220 DeoR-like helix-turn-helix domain MC28_RS19740 PF00849 RNA pseudouridylate synthase MC28_RS19740 PF01479 S4 domain MC28_RS19745 PF01943 Polysaccharide biosynthesis protein MC28_RS19745 PF14667 Polysaccharide biosynthesis C-terminal domain MC28_RS19755 PF07690 Major Facilitator Superfamily MC28_RS19760 PF01022 Bacterial regulatory protein, arsR family MC28_RS19765 PF08327 Activator of Hsp90 ATPase homolog 1-like protein MC28_RS19775 PF10957 Sporulation protein Cse60 MC28_RS19785 PF02559 CarD-like/TRCF domain MC28_RS19795 PF06800 Sugar transport protein MC28_RS19810 PF02391 MoaE protein MC28_RS19815 PF03205 Molybdopterin guanine dinucleotide synthesis protein B MC28_RS19820 PF03453 MoeA N-terminal region (domain I and II) MC28_RS19820 PF03454 MoeA C-terminal region (domain IV) MC28_RS19820 PF00994 Probable molybdopterin binding domain MC28_RS19825 PF01967 MoaC family MC28_RS19830 PF00899 ThiF family MC28_RS19835 PF04055 Radical SAM superfamily MC28_RS19835 PF06463 Molybdenum Cofactor Synthesis C MC28_RS19855 PF00581 Rhodanese-like domain MC28_RS19865 PF00561 alpha/beta hydrolase fold MC28_RS19870 PF03323 Bacillus/Clostridium GerA spore germination protein MC28_RS19875 PF03845 Spore germination protein MC28_RS19905 PF08264 Anticodon-binding domain of tRNA MC28_RS19905 PF00133 tRNA synthetases class I (I, L, M and V) MC28_RS19905 PF13603 Leucyl-tRNA synthetase, Domain 2 MC28_RS19905 PF09334 tRNA synthetases class I (M) MC28_RS19910 PF07690 Major Facilitator Superfamily MC28_RS19915 PF00999 Sodium/hydrogen exchanger family MC28_RS19920 PF02080 TrkA-C domain MC28_RS19925 PF00589 Phage integrase family MC28_RS19940 PF00005 ABC transporter MC28_RS19945 PF07786 Protein of unknown function (DUF1624) MC28_RS19945 PF04235 Protein of unknown function (DUF418) MC28_RS19955 PF10732 Protein of unknown function (DUF2524) MC28_RS19960 PF16199 Radical_SAM C-terminal domain MC28_RS19960 PF04055 Radical SAM superfamily MC28_RS19965 PF06962 Putative rRNA methylase MC28_RS19970 PF00005 ABC transporter MC28_RS19980 PF00571 CBS domain MC28_RS19980 PF03471 Transporter associated domain MC28_RS19980 PF01595 Cyclin M transmembrane N-terminal domain MC28_RS20005 PF00248 Aldo/keto reductase family MC28_RS20025 PF10776 Protein of unknown function (DUF2600) MC28_RS20030 PF12146 Serine aminopeptidase, S33 MC28_RS20035 PF00132 Bacterial transferase hexapeptide (six repeats) MC28_RS20040 PF01569 PAP2 superfamily MC28_RS20045 PF00534 Glycosyl transferases group 1 MC28_RS20045 PF13439 Glycosyltransferase Family 4 MC28_RS20050 PF12804 MobA-like NTP transferase domain MC28_RS20055 PF00994 Probable molybdopterin binding domain MC28_RS20065 PF02772 S-adenosylmethionine synthetase, central domain MC28_RS20065 PF00438 S-adenosylmethionine synthetase, N-terminal domain MC28_RS20065 PF02773 S-adenosylmethionine synthetase, C-terminal domain MC28_RS20070 PF01293 Phosphoenolpyruvate carboxykinase MC28_RS20100 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS20100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS20100 PF00989 PAS fold MC28_RS20105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS20105 PF02743 Cache domain MC28_RS20105 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS20110 PF18011 C-terminal domain found in long catalases MC28_RS20110 PF00199 Catalase MC28_RS20110 PF06628 Catalase-related immune-responsive MC28_RS20115 PF08386 TAP-like protein MC28_RS20115 PF00561 alpha/beta hydrolase fold MC28_RS20120 PF00884 Sulfatase MC28_RS20140 PF00005 ABC transporter MC28_RS20145 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS20170 PF00293 NUDIX domain MC28_RS20195 PF02664 S-Ribosylhomocysteinase (LuxS) MC28_RS20200 PF01809 Putative membrane protein insertion efficiency factor MC28_RS20205 PF00484 Carbonic anhydrase MC28_RS20210 PF01654 Cytochrome bd terminal oxidase subunit I MC28_RS20215 PF02322 Cytochrome bd terminal oxidase subunit II MC28_RS20220 PF10676 Spore germination protein gerPA/gerPF MC28_RS20230 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 MC28_RS20230 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) MC28_RS20255 PF04012 PspA/IM30 family MC28_RS20270 PF07670 Nucleoside recognition MC28_RS20270 PF02421 Ferrous iron transport protein B MC28_RS20270 PF07664 Ferrous iron transport protein B C terminus MC28_RS20270 PF17910 FeoB cytosolic helical domain MC28_RS20280 PF09515 Thiamine transporter protein (Thia_YuaJ) MC28_RS20285 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS20285 PF00672 HAMP domain MC28_RS20285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS20290 PF00486 Transcriptional regulatory protein, C terminal MC28_RS20290 PF00072 Response regulator receiver domain MC28_RS20315 PF00156 Phosphoribosyl transferase domain MC28_RS20320 PF00781 Diacylglycerol kinase catalytic domain MC28_RS20340 PF02687 FtsX-like permease family MC28_RS20345 PF00005 ABC transporter MC28_RS20355 PF00248 Aldo/keto reductase family MC28_RS20370 PF09335 SNARE associated Golgi protein MC28_RS20375 PF00398 Ribosomal RNA adenine dimethylase MC28_RS20380 PF02687 FtsX-like permease family MC28_RS20385 PF00005 ABC transporter MC28_RS20390 PF06445 GyrI-like small molecule binding domain MC28_RS20390 PF12833 Helix-turn-helix domain MC28_RS20400 PF00005 ABC transporter MC28_RS20405 PF13630 SdpI/YhfL protein family MC28_RS20405 PF07853 Protein of unknown function (DUF1648) MC28_RS20410 PF01022 Bacterial regulatory protein, arsR family MC28_RS20420 PF08281 Sigma-70, region 4 MC28_RS20420 PF04542 Sigma-70 region 2 MC28_RS20425 PF00072 Response regulator receiver domain MC28_RS20425 PF00486 Transcriptional regulatory protein, C terminal MC28_RS20430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS20435 PF02687 FtsX-like permease family MC28_RS20440 PF02687 FtsX-like permease family MC28_RS20445 PF00005 ABC transporter MC28_RS20450 PF02687 FtsX-like permease family MC28_RS20460 PF02447 GntP family permease MC28_RS20465 PF07702 UTRA domain MC28_RS20465 PF00392 Bacterial regulatory proteins, gntR family MC28_RS20475 PF07071 KDGP aldolase MC28_RS20480 PF03841 L-seryl-tRNA selenium transferase MC28_RS20485 PF01979 Amidohydrolase family MC28_RS20490 PF02557 D-alanyl-D-alanine carboxypeptidase MC28_RS20495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS20495 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS20500 PF00486 Transcriptional regulatory protein, C terminal MC28_RS20500 PF00072 Response regulator receiver domain MC28_RS20505 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MC28_RS20505 PF13378 Enolase C-terminal domain-like MC28_RS20510 PF00501 AMP-binding enzyme MC28_RS20510 PF13193 AMP-binding enzyme C-terminal domain MC28_RS20515 PF00378 Enoyl-CoA hydratase/isomerase MC28_RS20520 PF00561 alpha/beta hydrolase fold MC28_RS20525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MC28_RS20525 PF16582 Middle domain of thiamine pyrophosphate MC28_RS20525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MC28_RS20530 PF00425 chorismate binding enzyme MC28_RS20535 PF01040 UbiA prenyltransferase family MC28_RS20540 PF01258 Prokaryotic dksA/traR C4-type zinc finger MC28_RS20545 PF00313 'Cold-shock' DNA-binding domain MC28_RS20565 PF00343 Carbohydrate phosphorylase MC28_RS20570 PF08323 Starch synthase catalytic domain MC28_RS20570 PF00534 Glycosyl transferases group 1 MC28_RS20575 PF00483 Nucleotidyl transferase MC28_RS20580 PF00483 Nucleotidyl transferase MC28_RS20585 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MC28_RS20585 PF00128 Alpha amylase, catalytic domain MC28_RS20585 PF02806 Alpha amylase, C-terminal all-beta domain MC28_RS20595 PF00082 Subtilase family MC28_RS20595 PF05922 Peptidase inhibitor I9 MC28_RS20595 PF13860 FlgD Ig-like domain MC28_RS20595 PF02225 PA domain MC28_RS20600 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MC28_RS20600 PF00056 lactate/malate dehydrogenase, NAD binding domain MC28_RS20635 PF02308 MgtC family MC28_RS20640 PF02254 TrkA-N domain MC28_RS20640 PF07885 Ion channel MC28_RS20645 PF08868 YugN-like family MC28_RS20650 PF00342 Phosphoglucose isomerase MC28_RS20655 PF04070 Domain of unknown function (DUF378) MC28_RS20660 PF00575 S1 RNA binding domain MC28_RS20665 PF00155 Aminotransferase class I and II MC28_RS20670 PF01037 Lrp/AsnC ligand binding domain MC28_RS20675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MC28_RS20675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MC28_RS20680 PF08386 TAP-like protein MC28_RS20680 PF00561 alpha/beta hydrolase fold MC28_RS20690 PF00155 Aminotransferase class I and II MC28_RS20705 PF08810 Kinase associated protein B MC28_RS20710 PF00929 Exonuclease MC28_RS20715 PF03600 Citrate transporter MC28_RS20730 PF03129 Anticodon binding domain MC28_RS20730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MC28_RS20735 PF03061 Thioesterase superfamily MC28_RS20745 PF02632 BioY family MC28_RS20750 PF00483 Nucleotidyl transferase MC28_RS20755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MC28_RS20755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MC28_RS20755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MC28_RS20755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MC28_RS20760 PF10372 Bacterial membrane-spanning protein N-terminus MC28_RS20760 PF02457 DisA bacterial checkpoint controller nucleotide-binding MC28_RS20765 PF02789 Cytosol aminopeptidase family, N-terminal domain MC28_RS20765 PF00883 Cytosol aminopeptidase family, catalytic domain MC28_RS20770 PF06725 3D domain MC28_RS20780 PF13344 Haloacid dehalogenase-like hydrolase MC28_RS20780 PF00293 NUDIX domain MC28_RS20785 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC28_RS20790 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC28_RS20795 PF06445 GyrI-like small molecule binding domain MC28_RS20810 PF04463 Protein of unknown function (DUF523) MC28_RS20830 PF01521 Iron-sulphur cluster biosynthesis MC28_RS20835 PF01678 Diaminopimelate epimerase MC28_RS20840 PF07293 Protein of unknown function (DUF1450) MC28_RS20845 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC28_RS20855 PF03412 Peptidase C39 family MC28_RS20855 PF00664 ABC transporter transmembrane region MC28_RS20855 PF00005 ABC transporter MC28_RS20860 PF03649 Uncharacterised protein family (UPF0014) MC28_RS20865 PF08274 PhnA Zinc-Ribbon MC28_RS20865 PF03831 PhnA domain MC28_RS20880 PF13427 Domain of unknown function (DUF4111) MC28_RS20880 PF01909 Nucleotidyltransferase domain MC28_RS20885 PF07315 Protein of unknown function (DUF1462) MC28_RS20890 PF01106 NifU-like domain MC28_RS20905 PF04608 Phosphatidylglycerophosphatase A MC28_RS20920 PF00005 ABC transporter MC28_RS20920 PF02687 FtsX-like permease family MC28_RS20920 PF12704 MacB-like periplasmic core domain MC28_RS20925 PF02525 Flavodoxin-like fold MC28_RS20935 PF13344 Haloacid dehalogenase-like hydrolase MC28_RS20945 PF01934 Protein of unknown function DUF86 MC28_RS20950 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded MC28_RS20970 PF06265 Protein of unknown function (DUF1027) MC28_RS20975 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) MC28_RS20980 PF13411 MerR HTH family regulatory protein MC28_RS20980 PF07739 TipAS antibiotic-recognition domain MC28_RS20985 PF10086 YhfC intramembrane metalloprotease MC28_RS21005 PF04055 Radical SAM superfamily MC28_RS21005 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MC28_RS21010 PF01551 Peptidase family M23 MC28_RS21015 PF09560 Sporulation protein YunB (Spo_YunB) MC28_RS21020 PF08827 Domain of unknown function (DUF1805) MC28_RS21025 PF02872 5'-nucleotidase, C-terminal domain MC28_RS21030 PF01458 Uncharacterized protein family (UPF0051) MC28_RS21035 PF01592 NifU-like N terminal domain MC28_RS21040 PF00266 Aminotransferase class-V MC28_RS21045 PF01458 Uncharacterized protein family (UPF0051) MC28_RS21050 PF00005 ABC transporter MC28_RS21055 PF03180 NLPA lipoprotein MC28_RS21060 PF03180 NLPA lipoprotein MC28_RS21065 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS21070 PF09383 NIL domain MC28_RS21070 PF00005 ABC transporter MC28_RS21080 PF00085 Thioredoxin MC28_RS21085 PF01751 Toprim domain MC28_RS21090 PF01597 Glycine cleavage H-protein MC28_RS21095 PF03960 ArsC family MC28_RS21125 PF00056 lactate/malate dehydrogenase, NAD binding domain MC28_RS21125 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MC28_RS21145 PF00753 Metallo-beta-lactamase superfamily MC28_RS21150 PF02770 Acyl-CoA dehydrogenase, middle domain MC28_RS21150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MC28_RS21150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MC28_RS21160 PF02803 Thiolase, C-terminal domain MC28_RS21160 PF00108 Thiolase, N-terminal domain MC28_RS21165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MC28_RS21165 PF00378 Enoyl-CoA hydratase/isomerase MC28_RS21165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MC28_RS21170 PF14115 YuzL-like protein MC28_RS21175 PF00768 D-alanyl-D-alanine carboxypeptidase MC28_RS21175 PF07943 Penicillin-binding protein 5, C-terminal domain MC28_RS21180 PF01619 Proline dehydrogenase MC28_RS21185 PF10835 Protein of unknown function (DUF2573) MC28_RS21190 PF01910 Thiamine-binding protein MC28_RS21195 PF02743 Cache domain MC28_RS21195 PF00672 HAMP domain MC28_RS21195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC28_RS21210 PF07690 Major Facilitator Superfamily MC28_RS21215 PF13520 Amino acid permease MC28_RS21225 PF02096 60Kd inner membrane protein MC28_RS21235 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) MC28_RS21235 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 MC28_RS21265 PF09335 SNARE associated Golgi protein MC28_RS21275 PF17969 L,D-transpeptidase C-terminal domain MC28_RS21275 PF03734 L,D-transpeptidase catalytic domain MC28_RS21280 PF00486 Transcriptional regulatory protein, C terminal MC28_RS21280 PF00072 Response regulator receiver domain MC28_RS21285 PF16736 Single Cache-like MC28_RS21285 PF00989 PAS fold MC28_RS21285 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS21285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS21295 PF09334 tRNA synthetases class I (M) MC28_RS21295 PF08264 Anticodon-binding domain of tRNA MC28_RS21305 PF02743 Cache domain MC28_RS21305 PF00672 HAMP domain MC28_RS21305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC28_RS21310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC28_RS21310 PF00672 HAMP domain MC28_RS21310 PF02743 Cache domain MC28_RS21315 PF01883 Iron-sulfur cluster assembly protein MC28_RS21320 PF07504 Fungalysin/Thermolysin Propeptide Motif MC28_RS21320 PF03413 Peptidase propeptide and YPEB domain MC28_RS21320 PF01447 Thermolysin metallopeptidase, catalytic domain MC28_RS21320 PF02868 Thermolysin metallopeptidase, alpha-helical domain MC28_RS21325 PF17954 Quercetinase C-terminal cupin domain MC28_RS21325 PF02678 Pirin MC28_RS21330 PF01047 MarR family MC28_RS21340 PF09335 SNARE associated Golgi protein MC28_RS21345 PF00999 Sodium/hydrogen exchanger family MC28_RS21350 PF02080 TrkA-C domain MC28_RS21355 PF01235 Sodium:alanine symporter family MC28_RS21360 PF00210 Ferritin-like domain MC28_RS21380 PF03641 Possible lysine decarboxylase MC28_RS21390 PF00210 Ferritin-like domain MC28_RS21395 PF04235 Protein of unknown function (DUF418) MC28_RS21400 PF07662 Na+ dependent nucleoside transporter C-terminus MC28_RS21400 PF01773 Na+ dependent nucleoside transporter N-terminus MC28_RS21405 PF07662 Na+ dependent nucleoside transporter C-terminus MC28_RS21405 PF01773 Na+ dependent nucleoside transporter N-terminus MC28_RS21410 PF01235 Sodium:alanine symporter family MC28_RS21415 PF01235 Sodium:alanine symporter family MC28_RS21420 PF13460 NAD(P)H-binding MC28_RS21435 PF00248 Aldo/keto reductase family MC28_RS21440 PF07690 Major Facilitator Superfamily MC28_RS21445 PF01638 HxlR-like helix-turn-helix MC28_RS21450 PF07849 Protein of unknown function (DUF1641) MC28_RS21455 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC28_RS21460 PF00579 tRNA synthetases class I (W and Y) MC28_RS21460 PF01479 S4 domain MC28_RS21465 PF01565 FAD binding domain MC28_RS21465 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MC28_RS21475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC28_RS21475 PF00672 HAMP domain MC28_RS21475 PF17202 Single cache domain 3 MC28_RS21485 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MC28_RS21490 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MC28_RS21505 PF07690 Major Facilitator Superfamily MC28_RS21510 PF00005 ABC transporter MC28_RS21510 PF12848 ABC transporter MC28_RS21515 PF13302 Acetyltransferase (GNAT) domain MC28_RS21520 PF06146 Phosphate-starvation-inducible E MC28_RS21530 PF00857 Isochorismatase family MC28_RS21535 PF01037 Lrp/AsnC ligand binding domain MC28_RS21545 PF01037 Lrp/AsnC ligand binding domain MC28_RS21550 PF00484 Carbonic anhydrase MC28_RS21555 PF02560 Cyanate lyase C-terminal domain MC28_RS21560 PF00860 Permease family MC28_RS21570 PF00005 ABC transporter MC28_RS21575 PF01032 FecCD transport family MC28_RS21580 PF01032 FecCD transport family MC28_RS21590 PF00072 Response regulator receiver domain MC28_RS21590 PF00486 Transcriptional regulatory protein, C terminal MC28_RS21595 PF01668 SmpB protein MC28_RS21600 PF00575 S1 RNA binding domain MC28_RS21600 PF00773 RNB domain MC28_RS21600 PF17876 Cold shock domain MC28_RS21600 PF08206 Ribonuclease B OB domain MC28_RS21605 PF12146 Serine aminopeptidase, S33 MC28_RS21610 PF03840 Preprotein translocase SecG subunit MC28_RS21615 PF04172 LrgB-like family MC28_RS21620 PF03788 LrgA family MC28_RS21625 PF01156 Inosine-uridine preferring nucleoside hydrolase MC28_RS21630 PF00113 Enolase, C-terminal TIM barrel domain MC28_RS21630 PF03952 Enolase, N-terminal domain MC28_RS21635 PF06415 BPG-independent PGAM N-terminus (iPGM_N) MC28_RS21635 PF01676 Metalloenzyme superfamily MC28_RS21640 PF00121 Triosephosphate isomerase MC28_RS21645 PF00162 Phosphoglycerate kinase MC28_RS21650 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MC28_RS21650 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MC28_RS21655 PF04198 Putative sugar-binding domain MC28_RS21665 PF04552 Sigma-54, DNA binding domain MC28_RS21665 PF04963 Sigma-54 factor, core binding domain MC28_RS21665 PF00309 Sigma-54 factor, Activator interacting domain (AID) MC28_RS21695 PF03862 SpoVAC/SpoVAEB sporulation membrane protein MC28_RS21700 PF07451 Stage V sporulation protein AD (SpoVAD) MC28_RS21705 PF03862 SpoVAC/SpoVAEB sporulation membrane protein MC28_RS21715 PF04239 Protein of unknown function (DUF421) MC28_RS21720 PF00574 Clp protease MC28_RS21725 PF00381 PTS HPr component phosphorylation site MC28_RS21730 PF02650 WhiA C-terminal HTH domain MC28_RS21730 PF14527 WhiA LAGLIDADG-like domain MC28_RS21730 PF10298 WhiA N-terminal LAGLIDADG-like domain MC28_RS21735 PF01933 Uncharacterised protein family UPF0052 MC28_RS21740 PF03668 P-loop ATPase protein family MC28_RS21745 PF00293 NUDIX domain MC28_RS21755 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC28_RS21765 PF14602 Hexapeptide repeat of succinyl-transferase MC28_RS21770 PF13419 Haloacid dehalogenase-like hydrolase MC28_RS21775 PF01790 Prolipoprotein diacylglyceryl transferase MC28_RS21780 PF02603 HPr Serine kinase N terminus MC28_RS21780 PF07475 HPr Serine kinase C-terminal domain MC28_RS21785 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV MC28_RS21795 PF17760 UvrA interaction domain MC28_RS21795 PF17755 UvrA DNA-binding domain MC28_RS21795 PF00005 ABC transporter MC28_RS21800 PF02151 UvrB/uvrC motif MC28_RS21800 PF17757 UvrB interaction domain MC28_RS21800 PF12344 Ultra-violet resistance protein B MC28_RS21800 PF04851 Type III restriction enzyme, res subunit MC28_RS21800 PF00271 Helicase conserved C-terminal domain MC28_RS21810 PF07739 TipAS antibiotic-recognition domain MC28_RS21810 PF13411 MerR HTH family regulatory protein MC28_RS21825 PF03601 Conserved hypothetical protein 698 MC28_RS21830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC28_RS21830 PF03466 LysR substrate binding domain MC28_RS21835 PF13411 MerR HTH family regulatory protein MC28_RS21840 PF03358 NADPH-dependent FMN reductase MC28_RS21845 PF00005 ABC transporter MC28_RS21845 PF12848 ABC transporter MC28_RS21850 PF01906 Putative heavy-metal-binding MC28_RS21855 PF00005 ABC transporter MC28_RS21855 PF00664 ABC transporter transmembrane region MC28_RS21860 PF17820 PDZ domain MC28_RS21865 PF03572 Peptidase family S41 MC28_RS21865 PF01471 Putative peptidoglycan binding domain MC28_RS21865 PF17820 PDZ domain MC28_RS21870 PF18075 FtsX extracellular domain MC28_RS21870 PF02687 FtsX-like permease family MC28_RS21875 PF00005 ABC transporter MC28_RS21880 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MC28_RS21885 PF03462 PCRF domain MC28_RS21885 PF00472 RF-1 domain MC28_RS21890 PF02810 SEC-C motif MC28_RS21890 PF07517 SecA DEAD-like domain MC28_RS21890 PF01043 SecA preprotein cross-linking domain MC28_RS21890 PF07516 SecA Wing and Scaffold domain MC28_RS21895 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus MC28_RS21895 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MC28_RS21900 PF00313 'Cold-shock' DNA-binding domain MC28_RS21910 PF04851 Type III restriction enzyme, res subunit MC28_RS21910 PF00271 Helicase conserved C-terminal domain MC28_RS21915 PF00877 NlpC/P60 family MC28_RS21915 PF01476 LysM domain MC28_RS21920 PF01638 HxlR-like helix-turn-helix MC28_RS21925 PF02645 Uncharacterised protein, DegV family COG1307 MC28_RS21930 PF09186 Domain of unknown function (DUF1949) MC28_RS21930 PF01205 Uncharacterized protein family UPF0029 MC28_RS21935 PF03816 Cell envelope-related transcriptional attenuator domain MC28_RS21940 PF02350 UDP-N-acetylglucosamine 2-epimerase MC28_RS21945 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MC28_RS21945 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MC28_RS21945 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MC28_RS21950 PF00953 Glycosyl transferase family 4 MC28_RS21955 PF01522 Polysaccharide deacetylase MC28_RS21960 PF03610 PTS system fructose IIA component MC28_RS21960 PF00158 Sigma-54 interaction domain MC28_RS21960 PF00874 PRD domain MC28_RS21975 PF04794 YdjC-like protein MC28_RS21980 PF02056 Family 4 glycosyl hydrolase MC28_RS21980 PF11975 Family 4 glycosyl hydrolase C-terminal domain MC28_RS21985 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit MC28_RS21990 PF02378 Phosphotransferase system, EIIC MC28_RS21995 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MC28_RS22010 PF02675 S-adenosylmethionine decarboxylase MC28_RS22015 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit MC28_RS22020 PF02378 Phosphotransferase system, EIIC MC28_RS22025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MC28_RS22030 PF00375 Sodium:dicarboxylate symporter family MC28_RS22050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC28_RS22050 PF03466 LysR substrate binding domain MC28_RS22065 PF01654 Cytochrome bd terminal oxidase subunit I MC28_RS22070 PF02322 Cytochrome bd terminal oxidase subunit II MC28_RS22075 PF02040 Arsenical pump membrane protein MC28_RS22080 PF13667 ThiC-associated domain MC28_RS22080 PF01964 Radical SAM ThiC family MC28_RS22085 PF02652 L-lactate permease MC28_RS22095 PF09988 Uncharacterized metal-binding protein (DUF2227) MC28_RS22105 PF00884 Sulfatase MC28_RS22110 PF01063 Amino-transferase class IV MC28_RS22115 PF00877 NlpC/P60 family MC28_RS22115 PF01476 LysM domain MC28_RS22120 PF01773 Na+ dependent nucleoside transporter N-terminus MC28_RS22120 PF07662 Na+ dependent nucleoside transporter C-terminus MC28_RS22140 PF02028 BCCT, betaine/carnitine/choline family transporter MC28_RS22145 PF06725 3D domain MC28_RS22145 PF01476 LysM domain MC28_RS22155 PF04434 SWIM zinc finger MC28_RS22160 PF00271 Helicase conserved C-terminal domain MC28_RS22160 PF12419 SNF2 Helicase protein MC28_RS22160 PF00176 SNF2 family N-terminal domain MC28_RS22195 PF04893 Yip1 domain MC28_RS22200 PF02687 FtsX-like permease family MC28_RS22200 PF12704 MacB-like periplasmic core domain MC28_RS22205 PF00005 ABC transporter MC28_RS22215 PF07690 Major Facilitator Superfamily MC28_RS22230 PF00672 HAMP domain MC28_RS22230 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS22230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS22235 PF00486 Transcriptional regulatory protein, C terminal MC28_RS22235 PF00072 Response regulator receiver domain MC28_RS22240 PF16363 GDP-mannose 4,6 dehydratase MC28_RS22245 PF12804 MobA-like NTP transferase domain MC28_RS22250 PF00892 EamA-like transporter family MC28_RS22260 PF04991 LicD family MC28_RS22270 PF03816 Cell envelope-related transcriptional attenuator domain MC28_RS22275 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MC28_RS22275 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MC28_RS22275 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MC28_RS22280 PF00534 Glycosyl transferases group 1 MC28_RS22285 PF00535 Glycosyl transferase family 2 MC28_RS22300 PF13439 Glycosyltransferase Family 4 MC28_RS22300 PF00534 Glycosyl transferases group 1 MC28_RS22310 PF02397 Bacterial sugar transferase MC28_RS22315 PF00483 Nucleotidyl transferase MC28_RS22325 PF13614 AAA domain MC28_RS22330 PF02706 Chain length determinant protein MC28_RS22330 PF13807 G-rich domain on putative tyrosine kinase MC28_RS22335 PF13614 AAA domain MC28_RS22340 PF07977 FabA-like domain MC28_RS22350 PF12116 Stage III sporulation protein D MC28_RS22360 PF01551 Peptidase family M23 MC28_RS22370 PF00005 ABC transporter MC28_RS22375 PF00072 Response regulator receiver domain MC28_RS22375 PF04397 LytTr DNA-binding domain MC28_RS22380 PF08486 Stage II sporulation protein MC28_RS22385 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MC28_RS22395 PF06612 Protein of unknown function (DUF1146) MC28_RS22400 PF00361 Proton-conducting membrane transporter MC28_RS22405 PF00361 Proton-conducting membrane transporter MC28_RS22410 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MC28_RS22410 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus MC28_RS22410 PF00361 Proton-conducting membrane transporter MC28_RS22415 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MC28_RS22420 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 MC28_RS22430 PF00146 NADH dehydrogenase MC28_RS22435 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MC28_RS22440 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MC28_RS22445 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MC28_RS22450 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 MC28_RS22455 PF00990 Diguanylate cyclase, GGDEF domain MC28_RS22455 PF03707 Bacterial signalling protein N terminal repeat MC28_RS22455 PF00563 EAL domain MC28_RS22470 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MC28_RS22470 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain MC28_RS22475 PF02874 ATP synthase alpha/beta family, beta-barrel domain MC28_RS22475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MC28_RS22480 PF00231 ATP synthase MC28_RS22485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MC28_RS22485 PF00306 ATP synthase alpha/beta chain, C terminal domain MC28_RS22485 PF02874 ATP synthase alpha/beta family, beta-barrel domain MC28_RS22490 PF00213 ATP synthase delta (OSCP) subunit MC28_RS22495 PF00430 ATP synthase B/B' CF(0) MC28_RS22500 PF00137 ATP synthase subunit C MC28_RS22505 PF00119 ATP synthase A chain MC28_RS22510 PF03899 ATP synthase I chain MC28_RS22530 PF00464 Serine hydroxymethyltransferase MC28_RS22535 PF04260 Protein of unknown function (DUF436) MC28_RS22540 PF02502 Ribose/Galactose Isomerase MC28_RS22545 PF01451 Low molecular weight phosphotyrosine protein phosphatase MC28_RS22550 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MC28_RS22555 PF07681 DoxX MC28_RS22560 PF01613 Flavin reductase like domain MC28_RS22570 PF02659 Putative manganese efflux pump MC28_RS22575 PF03481 Putative GTP-binding controlling metal-binding MC28_RS22575 PF01300 Telomere recombination MC28_RS22585 PF09551 Stage II sporulation protein R (spore_II_R) MC28_RS22590 PF17827 PrmC N-terminal domain MC28_RS22590 PF13847 Methyltransferase domain MC28_RS22595 PF00472 RF-1 domain MC28_RS22595 PF03462 PCRF domain MC28_RS22600 PF00265 Thymidine kinase MC28_RS22605 PF01197 Ribosomal protein L31 MC28_RS22610 PF07497 Rho termination factor, RNA-binding domain MC28_RS22610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MC28_RS22610 PF07498 Rho termination factor, N-terminal domain MC28_RS22615 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded MC28_RS22620 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MC28_RS22625 PF01116 Fructose-bisphosphate aldolase class-II MC28_RS22630 PF00072 Response regulator receiver domain MC28_RS22635 PF10740 Domain of unknown function (DUF2529) MC28_RS22640 PF00117 Glutamine amidotransferase class-I MC28_RS22640 PF06418 CTP synthase N-terminus MC28_RS22645 PF05066 HB1, ASXL, restriction endonuclease HTH domain MC28_RS22655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MC28_RS22655 PF02770 Acyl-CoA dehydrogenase, middle domain MC28_RS22655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MC28_RS22660 PF02770 Acyl-CoA dehydrogenase, middle domain MC28_RS22660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MC28_RS22660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MC28_RS22665 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MC28_RS22665 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MC28_RS22670 PF00108 Thiolase, N-terminal domain MC28_RS22670 PF02803 Thiolase, C-terminal domain MC28_RS22675 PF02754 Cysteine-rich domain MC28_RS22675 PF13183 4Fe-4S dicluster domain MC28_RS22680 PF13091 PLD-like domain MC28_RS22685 PF03851 UV-endonuclease UvdE MC28_RS22690 PF00990 Diguanylate cyclase, GGDEF domain MC28_RS22690 PF03707 Bacterial signalling protein N terminal repeat MC28_RS22690 PF00563 EAL domain MC28_RS22705 PF01447 Thermolysin metallopeptidase, catalytic domain MC28_RS22705 PF03413 Peptidase propeptide and YPEB domain MC28_RS22705 PF02868 Thermolysin metallopeptidase, alpha-helical domain MC28_RS22705 PF07504 Fungalysin/Thermolysin Propeptide Motif MC28_RS22710 PF00072 Response regulator receiver domain MC28_RS22710 PF00196 Bacterial regulatory proteins, luxR family MC28_RS22715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS22715 PF07730 Histidine kinase MC28_RS22725 PF00005 ABC transporter MC28_RS22730 PF00557 Metallopeptidase family M24 MC28_RS22740 PF02225 PA domain MC28_RS22740 PF04389 Peptidase family M28 MC28_RS22760 PF00750 tRNA synthetases class I (R) MC28_RS22760 PF05746 DALR anticodon binding domain MC28_RS22760 PF03485 Arginyl tRNA synthetase N terminal domain MC28_RS22765 PF09148 Domain of unknown function (DUF1934) MC28_RS22770 PF02016 LD-carboxypeptidase N-terminal domain MC28_RS22770 PF17676 LD-carboxypeptidase C-terminal domain MC28_RS22785 PF00491 Arginase family MC28_RS22790 PF17284 Spermidine synthase tetramerisation domain MC28_RS22795 PF07690 Major Facilitator Superfamily MC28_RS22800 PF13411 MerR HTH family regulatory protein MC28_RS22805 PF03009 Glycerophosphoryl diester phosphodiesterase family MC28_RS22810 PF00905 Penicillin binding protein transpeptidase domain MC28_RS22810 PF00912 Transglycosylase MC28_RS22815 PF08741 YwhD family MC28_RS22820 PF02163 Peptidase family M50 MC28_RS22825 PF01361 Tautomerase enzyme MC28_RS22830 PF01966 HD domain MC28_RS22835 PF01497 Periplasmic binding protein MC28_RS22840 PF00005 ABC transporter MC28_RS22845 PF01032 FecCD transport family MC28_RS22850 PF01032 FecCD transport family MC28_RS22855 PF07293 Protein of unknown function (DUF1450) MC28_RS22865 PF03099 Biotin/lipoate A/B protein ligase family MC28_RS22870 PF01515 Phosphate acetyl/butaryl transferase MC28_RS22875 PF06778 Chlorite dismutase MC28_RS22880 PF00768 D-alanyl-D-alanine carboxypeptidase MC28_RS22880 PF07943 Penicillin-binding protein 5, C-terminal domain MC28_RS22885 PF07486 Cell Wall Hydrolase MC28_RS22890 PF09671 Spore coat protein (Spore_GerQ) MC28_RS22895 PF04241 Protein of unknown function (DUF423) MC28_RS22905 PF02254 TrkA-N domain MC28_RS22905 PF07885 Ion channel MC28_RS22910 PF00860 Permease family MC28_RS22920 PF12823 Domain of unknown function (DUF3817) MC28_RS22925 PF03167 Uracil DNA glycosylase superfamily MC28_RS22930 PF12679 ABC-2 family transporter protein MC28_RS22935 PF00005 ABC transporter MC28_RS22940 PF13472 GDSL-like Lipase/Acylhydrolase family MC28_RS22945 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MC28_RS22945 PF00356 Bacterial regulatory proteins, lacI family MC28_RS22955 PF01842 ACT domain MC28_RS22955 PF00742 Homoserine dehydrogenase MC28_RS22955 PF03447 Homoserine dehydrogenase, NAD binding domain MC28_RS22960 PF04204 Homoserine O-succinyltransferase MC28_RS22965 PF01053 Cys/Met metabolism PLP-dependent enzyme MC28_RS22975 PF13419 Haloacid dehalogenase-like hydrolase MC28_RS22980 PF00027 Cyclic nucleotide-binding domain MC28_RS22985 PF02525 Flavodoxin-like fold MC28_RS22990 PF00072 Response regulator receiver domain MC28_RS22990 PF00196 Bacterial regulatory proteins, luxR family MC28_RS22995 PF07730 Histidine kinase MC28_RS22995 PF13185 GAF domain MC28_RS23000 PF08543 Phosphomethylpyrimidine kinase MC28_RS23005 PF07694 5TMR of 5TMR-LYT MC28_RS23005 PF00990 Diguanylate cyclase, GGDEF domain MC28_RS23010 PF04328 Selenoprotein, putative MC28_RS23015 PF02554 Carbon starvation protein CstA MC28_RS23015 PF13722 5TM C-terminal transporter carbon starvation CstA MC28_RS23020 PF04397 LytTr DNA-binding domain MC28_RS23020 PF00072 Response regulator receiver domain MC28_RS23025 PF07690 Major Facilitator Superfamily MC28_RS23030 PF03808 Glycosyl transferase WecB/TagA/CpsF family MC28_RS23035 PF00534 Glycosyl transferases group 1 MC28_RS23035 PF13439 Glycosyltransferase Family 4 MC28_RS23045 PF03458 UPF0126 domain MC28_RS23050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC28_RS23060 PF03061 Thioesterase superfamily MC28_RS23070 PF00535 Glycosyl transferase family 2 MC28_RS23080 PF00440 Bacterial regulatory proteins, tetR family MC28_RS23080 PF08361 MAATS-type transcriptional repressor, C-terminal region MC28_RS23085 PF12848 ABC transporter MC28_RS23085 PF00005 ABC transporter MC28_RS23100 PF00535 Glycosyl transferase family 2 MC28_RS23105 PF00440 Bacterial regulatory proteins, tetR family MC28_RS23110 PF00873 AcrB/AcrD/AcrF family MC28_RS23115 PF01625 Peptide methionine sulfoxide reductase MC28_RS23115 PF01641 SelR domain MC28_RS23120 PF01594 AI-2E family transporter MC28_RS23125 PF04172 LrgB-like family MC28_RS23130 PF03788 LrgA family MC28_RS23135 PF00072 Response regulator receiver domain MC28_RS23135 PF04397 LytTr DNA-binding domain MC28_RS23140 PF07694 5TMR of 5TMR-LYT MC28_RS23140 PF13492 GAF domain MC28_RS23140 PF06580 Histidine kinase MC28_RS23140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS23145 PF07690 Major Facilitator Superfamily MC28_RS23150 PF02028 BCCT, betaine/carnitine/choline family transporter MC28_RS23155 PF02898 Nitric oxide synthase, oxygenase domain MC28_RS23160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MC28_RS23160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MC28_RS23170 PF02293 AmiS/UreI family transporter MC28_RS23180 PF16363 GDP-mannose 4,6 dehydratase MC28_RS23185 PF03006 Haemolysin-III related MC28_RS23195 PF00270 DEAD/DEAH box helicase MC28_RS23195 PF03880 DbpA RNA binding domain MC28_RS23195 PF00271 Helicase conserved C-terminal domain MC28_RS23205 PF00478 IMP dehydrogenase / GMP reductase domain MC28_RS23210 PF08439 Oligopeptidase F MC28_RS23210 PF01432 Peptidase family M3 MC28_RS23220 PF02590 Predicted SPOUT methyltransferase MC28_RS23230 PF13180 PDZ domain MC28_RS23235 PF00753 Metallo-beta-lactamase superfamily MC28_RS23240 PF09648 YycH protein MC28_RS23250 PF13426 PAS domain MC28_RS23250 PF00672 HAMP domain MC28_RS23250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS23250 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS23255 PF00486 Transcriptional regulatory protein, C terminal MC28_RS23255 PF00072 Response regulator receiver domain MC28_RS23280 PF00709 Adenylosuccinate synthetase MC28_RS23285 PF03796 DnaB-like helicase C terminal domain MC28_RS23285 PF00772 DnaB-like helicase N terminal domain MC28_RS23290 PF03948 Ribosomal protein L9, C-terminal domain MC28_RS23290 PF01281 Ribosomal protein L9, N-terminal domain MC28_RS23295 PF02272 DHHA1 domain MC28_RS23295 PF01368 DHH family MC28_RS23300 PF09991 Predicted membrane protein (DUF2232) MC28_RS23305 PF01084 Ribosomal protein S18 MC28_RS23310 PF00436 Single-strand binding protein family MC28_RS23315 PF01250 Ribosomal protein S6 MC28_RS23320 PF06071 Protein of unknown function (DUF933) MC28_RS23320 PF01926 50S ribosome-binding GTPase MC28_RS23325 PF06107 Bacterial protein of unknown function (DUF951) MC28_RS23330 PF00924 Mechanosensitive ion channel MC28_RS23335 PF06866 Protein of unknown function (DUF1256) MC28_RS23340 PF02195 ParB-like nuclease domain MC28_RS23340 PF17762 HTH domain found in ParB protein MC28_RS23345 PF13614 AAA domain MC28_RS23350 PF17762 HTH domain found in ParB protein MC28_RS23350 PF02195 ParB-like nuclease domain MC28_RS23355 PF02527 rRNA small subunit methyltransferase G MC28_RS23360 PF01134 Glucose inhibited division protein A MC28_RS23360 PF13932 GidA associated domain MC28_RS23365 PF01926 50S ribosome-binding GTPase MC28_RS23365 PF12631 MnmE helical domain MC28_RS23365 PF10396 GTP-binding protein TrmE N-terminus MC28_RS23370 PF01424 R3H domain MC28_RS23370 PF14804 Jag N-terminus MC28_RS23375 PF02096 60Kd inner membrane protein MC28_RS23380 PF00825 Ribonuclease P MC28_RS23385 PF00468 Ribosomal protein L34 MC28_RS23390 PF08299 Bacterial dnaA protein helix-turn-helix MC28_RS23390 PF00308 Bacterial dnaA protein MC28_RS23390 PF11638 DnaA N-terminal domain MC28_RS23395 PF00712 DNA polymerase III beta subunit, N-terminal domain MC28_RS23395 PF02768 DNA polymerase III beta subunit, C-terminal domain MC28_RS23395 PF02767 DNA polymerase III beta subunit, central domain MC28_RS23405 PF02463 RecF/RecN/SMC N terminal domain MC28_RS23410 PF00204 DNA gyrase B MC28_RS23410 PF00986 DNA gyrase B subunit, carboxyl terminus MC28_RS23410 PF01751 Toprim domain MC28_RS23410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS23415 PF03989 DNA gyrase C-terminal domain, beta-propeller MC28_RS23415 PF00521 DNA gyrase/topoisomerase IV, subunit A MC28_RS23435 PF14175 YaaC-like Protein MC28_RS23440 PF00571 CBS domain MC28_RS23440 PF00478 IMP dehydrogenase / GMP reductase domain MC28_RS23445 PF00768 D-alanyl-D-alanine carboxypeptidase MC28_RS23445 PF07943 Penicillin-binding protein 5, C-terminal domain MC28_RS23450 PF01680 SOR/SNZ family MC28_RS23455 PF01174 SNO glutamine amidotransferase family MC28_RS23460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MC28_RS23460 PF02403 Seryl-tRNA synthetase N-terminal domain MC28_RS23475 PF01712 Deoxynucleoside kinase MC28_RS23480 PF01712 Deoxynucleoside kinase MC28_RS23485 PF00857 Isochorismatase family MC28_RS23490 PF14437 MafB19-like deaminase MC28_RS23495 PF12169 DNA polymerase III subunits gamma and tau domain III MC28_RS23500 PF02575 YbaB/EbfC DNA-binding family MC28_RS23505 PF13662 Toprim domain MC28_RS23505 PF02132 RecR protein MC28_RS23510 PF10704 Protein of unknown function (DUF2508) MC28_RS23515 PF07441 SigmaK-factor processing regulatory protein BofA MC28_RS23540 PF01276 Orn/Lys/Arg decarboxylase, major domain MC28_RS23540 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain MC28_RS23545 PF02223 Thymidylate kinase MC28_RS23550 PF09115 DNA polymerase III, delta subunit, C terminal MC28_RS23555 PF04468 PSP1 C-terminal conserved region MC28_RS23560 PF06156 Initiation control protein YabA MC28_RS23565 PF05175 Methyltransferase small domain MC28_RS23570 PF01541 GIY-YIG catalytic domain MC28_RS23575 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MC28_RS23580 PF18277 AbrB C-terminal domain MC28_RS23580 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin MC28_RS23585 PF09334 tRNA synthetases class I (M) MC28_RS23585 PF01588 Putative tRNA binding domain MC28_RS23585 PF08264 Anticodon-binding domain of tRNA MC28_RS23590 PF01026 TatD related DNase MC28_RS23595 PF13331 Domain of unknown function (DUF4093) MC28_RS23595 PF13662 Toprim domain MC28_RS23600 PF00398 Ribosomal RNA adenine dimethylase MC28_RS23605 PF05582 YabG peptidase U57 MC28_RS23610 PF06257 Biofilm formation stimulator VEG MC28_RS23615 PF00269 Small, acid-soluble spore proteins, alpha/beta type MC28_RS23620 PF00288 GHMP kinases N terminal domain MC28_RS23620 PF08544 GHMP kinases C terminal MC28_RS23625 PF09182 Bacterial purine repressor, N-terminal MC28_RS23625 PF00156 Phosphoribosyl transferase domain MC28_RS23630 PF01042 Endoribonuclease L-PSP MC28_RS23635 PF04026 SpoVG MC28_RS23640 PF00483 Nucleotidyl transferase MC28_RS23640 PF00132 Bacterial transferase hexapeptide (six repeats) MC28_RS23645 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MC28_RS23645 PF14572 Phosphoribosyl synthetase-associated domain MC28_RS23650 PF01195 Peptidyl-tRNA hydrolase MC28_RS23660 PF02559 CarD-like/TRCF domain MC28_RS23660 PF00270 DEAD/DEAH box helicase MC28_RS23660 PF00271 Helicase conserved C-terminal domain MC28_RS23660 PF03461 TRCF domain MC28_RS23660 PF17757 UvrB interaction domain MC28_RS23665 PF15714 Stage V sporulation protein T C-terminal, transcription factor MC28_RS23665 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin MC28_RS23670 PF14667 Polysaccharide biosynthesis C-terminal domain MC28_RS23670 PF01943 Polysaccharide biosynthesis protein MC28_RS23675 PF03819 MazG nucleotide pyrophosphohydrolase domain MC28_RS23675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MC28_RS23680 PF01479 S4 domain MC28_RS23685 PF07873 YabP family MC28_RS23690 PF09578 Spore cortex protein YabQ (Spore_YabQ) MC28_RS23700 PF00575 S1 RNA binding domain MC28_RS23715 PF07228 Stage II sporulation protein E (SpoIIE) MC28_RS23720 PF01171 PP-loop family MC28_RS23720 PF09179 TilS substrate binding domain MC28_RS23720 PF11734 TilS substrate C-terminal domain MC28_RS23725 PF00156 Phosphoribosyl transferase domain MC28_RS23730 PF00004 ATPase family associated with various cellular activities (AAA) MC28_RS23730 PF17862 AAA+ lid domain MC28_RS23730 PF06480 FtsH Extracellular MC28_RS23730 PF01434 Peptidase family M41 MC28_RS23735 PF03309 Type III pantothenate kinase MC28_RS23740 PF01430 Hsp33 protein MC28_RS23745 PF00291 Pyridoxal-phosphate dependent enzyme MC28_RS23750 PF00425 chorismate binding enzyme MC28_RS23750 PF04715 Anthranilate synthase component I, N terminal region MC28_RS23755 PF00117 Glutamine amidotransferase class-I MC28_RS23760 PF01063 Amino-transferase class IV MC28_RS23765 PF00809 Pterin binding enzyme MC28_RS23770 PF02152 Dihydroneopterin aldolase MC28_RS23775 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MC28_RS23780 PF01381 Helix-turn-helix MC28_RS23785 PF01207 Dihydrouridine synthase (Dus) MC28_RS23790 PF00152 tRNA synthetases class II (D, K and N) MC28_RS23790 PF01336 OB-fold nucleic acid binding domain MC28_RS23810 PF05848 CtsR N-terminal HTH domain MC28_RS23810 PF17727 CtsR C-terminal dimerization domain MC28_RS23815 PF02151 UvrB/uvrC motif MC28_RS23820 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain MC28_RS23825 PF07724 AAA domain (Cdc48 subfamily) MC28_RS23825 PF00004 ATPase family associated with various cellular activities (AAA) MC28_RS23825 PF17871 AAA lid domain MC28_RS23825 PF02861 Clp amino terminal domain, pathogenicity island component MC28_RS23825 PF10431 C-terminal, D2-small domain, of ClpB protein MC28_RS23830 PF18073 Rubredoxin metal binding domain MC28_RS23835 PF02457 DisA bacterial checkpoint controller nucleotide-binding MC28_RS23835 PF10635 DisA bacterial checkpoint controller linker region MC28_RS23845 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MC28_RS23850 PF02542 YgbB family MC28_RS23855 PF00749 tRNA synthetases class I (E and Q), catalytic domain MC28_RS23860 PF06426 Serine acetyltransferase, N-terminal MC28_RS23860 PF00132 Bacterial transferase hexapeptide (six repeats) MC28_RS23865 PF09190 DALR domain MC28_RS23865 PF01406 tRNA synthetases class I (C) catalytic domain MC28_RS23870 PF00636 Ribonuclease III domain MC28_RS23875 PF00588 SpoU rRNA Methylase family MC28_RS23875 PF08032 RNA 2'-O ribose methyltransferase substrate binding MC28_RS23880 PF05991 YacP-like NYN domain MC28_RS23885 PF08281 Sigma-70, region 4 MC28_RS23885 PF04542 Sigma-70 region 2 MC28_RS23890 PF00584 SecE/Sec61-gamma subunits of protein translocation complex MC28_RS23895 PF02357 Transcription termination factor nusG MC28_RS23895 PF00467 KOW motif MC28_RS23900 PF00298 Ribosomal protein L11, RNA binding domain MC28_RS23900 PF03946 Ribosomal protein L11, N-terminal domain MC28_RS23905 PF00687 Ribosomal protein L1p/L10e family MC28_RS23910 PF00466 Ribosomal protein L10 MC28_RS23915 PF00542 Ribosomal protein L7/L12 C-terminal domain MC28_RS23915 PF16320 Ribosomal protein L7/L12 dimerisation domain MC28_RS23920 PF05175 Methyltransferase small domain MC28_RS23925 PF04563 RNA polymerase beta subunit MC28_RS23925 PF00562 RNA polymerase Rpb2, domain 6 MC28_RS23925 PF04560 RNA polymerase Rpb2, domain 7 MC28_RS23925 PF04561 RNA polymerase Rpb2, domain 2 MC28_RS23925 PF04565 RNA polymerase Rpb2, domain 3 MC28_RS23925 PF10385 RNA polymerase beta subunit external 1 domain MC28_RS23930 PF04997 RNA polymerase Rpb1, domain 1 MC28_RS23930 PF05000 RNA polymerase Rpb1, domain 4 MC28_RS23930 PF04983 RNA polymerase Rpb1, domain 3 MC28_RS23930 PF04998 RNA polymerase Rpb1, domain 5 MC28_RS23930 PF00623 RNA polymerase Rpb1, domain 2 MC28_RS23935 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family MC28_RS23940 PF00164 Ribosomal protein S12/S23 MC28_RS23945 PF00177 Ribosomal protein S7p/S5e MC28_RS23950 PF03764 Elongation factor G, domain IV MC28_RS23950 PF00679 Elongation factor G C-terminus MC28_RS23950 PF14492 Elongation Factor G, domain II MC28_RS23950 PF00009 Elongation factor Tu GTP binding domain MC28_RS23950 PF03144 Elongation factor Tu domain 2 MC28_RS23955 PF03143 Elongation factor Tu C-terminal domain MC28_RS23955 PF03144 Elongation factor Tu domain 2 MC28_RS23955 PF00009 Elongation factor Tu GTP binding domain MC28_RS23960 PF00338 Ribosomal protein S10p/S20e MC28_RS23965 PF00297 Ribosomal protein L3 MC28_RS23970 PF00573 Ribosomal protein L4/L1 family MC28_RS23975 PF00276 Ribosomal protein L23 MC28_RS23980 PF03947 Ribosomal Proteins L2, C-terminal domain MC28_RS23980 PF00181 Ribosomal Proteins L2, RNA binding domain MC28_RS23985 PF00203 Ribosomal protein S19 MC28_RS23990 PF00237 Ribosomal protein L22p/L17e MC28_RS23995 PF07650 KH domain MC28_RS23995 PF00189 Ribosomal protein S3, C-terminal domain MC28_RS24000 PF00252 Ribosomal protein L16p/L10e MC28_RS24005 PF00831 Ribosomal L29 protein MC28_RS24010 PF00366 Ribosomal protein S17 MC28_RS24015 PF00238 Ribosomal protein L14p/L23e MC28_RS24020 PF00467 KOW motif MC28_RS24020 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MC28_RS24025 PF00673 ribosomal L5P family C-terminus MC28_RS24025 PF00281 Ribosomal protein L5 MC28_RS24030 PF00253 Ribosomal protein S14p/S29e MC28_RS24035 PF00410 Ribosomal protein S8 MC28_RS24040 PF00347 Ribosomal protein L6 MC28_RS24045 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MC28_RS24050 PF03719 Ribosomal protein S5, C-terminal domain MC28_RS24050 PF00333 Ribosomal protein S5, N-terminal domain MC28_RS24055 PF00327 Ribosomal protein L30p/L7e MC28_RS24060 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MC28_RS24065 PF00344 SecY translocase MC28_RS24070 PF05191 Adenylate kinase, active site lid MC28_RS24075 PF00557 Metallopeptidase family M24 MC28_RS24080 PF01176 Translation initiation factor 1A / IF-1 MC28_RS24085 PF00444 Ribosomal protein L36 MC28_RS24090 PF00416 Ribosomal protein S13/S18 MC28_RS24095 PF00411 Ribosomal protein S11 MC28_RS24100 PF01000 RNA polymerase Rpb3/RpoA insert domain MC28_RS24100 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MC28_RS24100 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MC28_RS24105 PF01196 Ribosomal protein L17 MC28_RS24110 PF00005 ABC transporter MC28_RS24115 PF00005 ABC transporter MC28_RS24120 PF02361 Cobalt transport protein MC28_RS24125 PF01416 tRNA pseudouridine synthase MC28_RS24130 PF00572 Ribosomal protein L13 MC28_RS24135 PF00380 Ribosomal protein S9/S16 MC28_RS24145 PF01520 N-acetylmuramoyl-L-alanine amidase MC28_RS24150 PF10609 NUBPL iron-transfer P-loop NTPase MC28_RS24155 PF17898 Spore germination GerD central core domain MC28_RS24160 PF14089 KinB-signalling pathway activation in sporulation MC28_RS24165 PF01522 Polysaccharide deacetylase MC28_RS24235 PF02595 Glycerate kinase family MC28_RS24240 PF00491 Arginase family MC28_RS24245 PF02457 DisA bacterial checkpoint controller nucleotide-binding MC28_RS24250 PF07949 YbbR-like protein MC28_RS24255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MC28_RS24255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MC28_RS24255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MC28_RS24255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MC28_RS24260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MC28_RS24260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MC28_RS24260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MC28_RS24260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MC28_RS24270 PF01380 SIS domain MC28_RS24275 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region MC28_RS24275 PF00326 Prolyl oligopeptidase family MC28_RS24300 PF09383 NIL domain MC28_RS24300 PF00005 ABC transporter MC28_RS24305 PF03180 NLPA lipoprotein MC28_RS24310 PF00107 Zinc-binding dehydrogenase MC28_RS24310 PF08240 Alcohol dehydrogenase GroES-like domain MC28_RS24320 PF01565 FAD binding domain MC28_RS24325 PF07690 Major Facilitator Superfamily MC28_RS24335 PF07690 Major Facilitator Superfamily MC28_RS24350 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS24355 PF12911 N-terminal TM domain of oligopeptide transport permease C MC28_RS24355 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS24360 PF00005 ABC transporter MC28_RS24360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MC28_RS24365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MC28_RS24365 PF00005 ABC transporter MC28_RS24370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC28_RS24380 PF12833 Helix-turn-helix domain MC28_RS24390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC28_RS24395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC28_RS24400 PF00248 Aldo/keto reductase family MC28_RS24405 PF14748 Pyrroline-5-carboxylate reductase dimerisation MC28_RS24405 PF03807 NADP oxidoreductase coenzyme F420-dependent MC28_RS24410 PF04973 Nicotinamide mononucleotide transporter MC28_RS24415 PF06800 Sugar transport protein MC28_RS24420 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS24430 PF12727 PBP superfamily domain MC28_RS24430 PF12728 Helix-turn-helix domain MC28_RS24435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MC28_RS24435 PF03466 LysR substrate binding domain MC28_RS24440 PF00892 EamA-like transporter family MC28_RS24445 PF14142 YrzO-like protein MC28_RS24450 PF00356 Bacterial regulatory proteins, lacI family MC28_RS24450 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MC28_RS24460 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) MC28_RS24460 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 MC28_RS24480 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) MC28_RS24500 PF12848 ABC transporter MC28_RS24500 PF00005 ABC transporter MC28_RS24500 PF16326 ABC transporter C-terminal domain MC28_RS24510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MC28_RS24515 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS24520 PF12911 N-terminal TM domain of oligopeptide transport permease C MC28_RS24520 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS24525 PF00005 ABC transporter MC28_RS24525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MC28_RS24530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MC28_RS24530 PF00005 ABC transporter MC28_RS24570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC28_RS24575 PF01557 Fumarylacetoacetate (FAA) hydrolase family MC28_RS24585 PF13520 Amino acid permease MC28_RS24590 PF07690 Major Facilitator Superfamily MC28_RS24595 PF01820 D-ala D-ala ligase N-terminus MC28_RS24595 PF07478 D-ala D-ala ligase C-terminus MC28_RS24600 PF08245 Mur ligase middle domain MC28_RS24600 PF02875 Mur ligase family, glutamate ligase domain MC28_RS24600 PF01225 Mur ligase family, catalytic domain MC28_RS24605 PF00270 DEAD/DEAH box helicase MC28_RS24605 PF00271 Helicase conserved C-terminal domain MC28_RS24610 PF03851 UV-endonuclease UvdE MC28_RS24615 PF01694 Rhomboid family MC28_RS24620 PF01648 4'-phosphopantetheinyl transferase superfamily MC28_RS24630 PF01168 Alanine racemase, N-terminal domain MC28_RS24630 PF00842 Alanine racemase, C-terminal domain MC28_RS24635 PF01402 Ribbon-helix-helix protein, copG family MC28_RS24640 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system MC28_RS24645 PF00575 S1 RNA binding domain MC28_RS24645 PF09371 Tex-like protein N-terminal domain MC28_RS24645 PF17674 HHH domain MC28_RS24645 PF16921 Tex protein YqgF-like domain MC28_RS24650 PF10263 SprT-like family MC28_RS24650 PF17283 SprT-like zinc ribbon domain MC28_RS24740 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MC28_RS24745 PF00814 Glycoprotease family MC28_RS24750 PF00583 Acetyltransferase (GNAT) family MC28_RS24755 PF00814 Glycoprotease family MC28_RS24760 PF12848 ABC transporter MC28_RS24760 PF00005 ABC transporter MC28_RS24760 PF16326 ABC transporter C-terminal domain MC28_RS24765 PF06971 Putative DNA-binding protein N-terminus MC28_RS24765 PF02629 CoA binding domain MC28_RS24775 PF02517 CPBP intramembrane metalloprotease MC28_RS24780 PF00166 Chaperonin 10 Kd subunit MC28_RS24785 PF00118 TCP-1/cpn60 chaperonin family MC28_RS24795 PF02540 NAD synthase MC28_RS24795 PF00958 GMP synthase C terminal domain MC28_RS24795 PF00117 Glutamine amidotransferase class-I MC28_RS24840 PF18106 Rolling Circle replication initiation protein N-terminal domain MC28_RS24840 PF02486 Replication initiation factor MC28_RS24855 PF00149 Calcineurin-like phosphoesterase MC28_RS24865 PF00860 Permease family MC28_RS24870 PF00486 Transcriptional regulatory protein, C terminal MC28_RS24870 PF00072 Response regulator receiver domain MC28_RS24875 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS24875 PF16736 Single Cache-like MC28_RS24875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS24875 PF00989 PAS fold MC28_RS24900 PF01323 DSBA-like thioredoxin domain MC28_RS24920 PF14307 Glycosyltransferase WbsX MC28_RS24920 PF05045 Rhamnan synthesis protein F MC28_RS24930 PF08241 Methyltransferase domain MC28_RS24950 PF00535 Glycosyl transferase family 2 MC28_RS24970 PF00892 EamA-like transporter family MC28_RS25005 PF02673 Bacitracin resistance protein BacA MC28_RS25015 PF00005 ABC transporter MC28_RS25020 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS25020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS25025 PF00486 Transcriptional regulatory protein, C terminal MC28_RS25025 PF00072 Response regulator receiver domain MC28_RS25045 PF14307 Glycosyltransferase WbsX MC28_RS25045 PF05045 Rhamnan synthesis protein F MC28_RS25055 PF08241 Methyltransferase domain MC28_RS25065 PF16363 GDP-mannose 4,6 dehydratase MC28_RS25075 PF00535 Glycosyl transferase family 2 MC28_RS25095 PF00892 EamA-like transporter family MC28_RS25125 PF00731 AIR carboxylase MC28_RS25130 PF02222 ATP-grasp domain MC28_RS25130 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MC28_RS25135 PF00206 Lyase MC28_RS25135 PF10397 Adenylosuccinate lyase C-terminus MC28_RS25140 PF01259 SAICAR synthetase MC28_RS25145 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase MC28_RS25155 PF02769 AIR synthase related protein, C-terminal domain MC28_RS25155 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MC28_RS25155 PF00586 AIR synthase related protein, N-terminal domain MC28_RS25160 PF00156 Phosphoribosyl transferase domain MC28_RS25165 PF00586 AIR synthase related protein, N-terminal domain MC28_RS25165 PF02769 AIR synthase related protein, C-terminal domain MC28_RS25170 PF00551 Formyl transferase MC28_RS25175 PF02142 MGS-like domain MC28_RS25175 PF01808 AICARFT/IMPCHase bienzyme MC28_RS25180 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MC28_RS25180 PF02844 Phosphoribosylglycinamide synthetase, N domain MC28_RS25180 PF02843 Phosphoribosylglycinamide synthetase, C domain MC28_RS25200 PF01884 PcrB family MC28_RS25205 PF13361 UvrD-like helicase C-terminal domain MC28_RS25205 PF00580 UvrD/REP helicase N-terminal domain MC28_RS25210 PF12826 Helix-hairpin-helix motif MC28_RS25210 PF03120 NAD-dependent DNA ligase OB-fold domain MC28_RS25210 PF00533 BRCA1 C Terminus (BRCT) domain MC28_RS25210 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MC28_RS25210 PF01653 NAD-dependent DNA ligase adenylation domain MC28_RS25215 PF07537 CamS sex pheromone cAM373 precursor MC28_RS25220 PF01925 Sulfite exporter TauE/SafE MC28_RS25225 PF00171 Aldehyde dehydrogenase family MC28_RS25230 PF00857 Isochorismatase family MC28_RS25235 PF00005 ABC transporter MC28_RS25235 PF09383 NIL domain MC28_RS25240 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS25245 PF03180 NLPA lipoprotein MC28_RS25255 PF02374 Anion-transporting ATPase MC28_RS25255 PF17886 HSP20-like domain found in ArsA MC28_RS25260 PF01047 MarR family MC28_RS25265 PF05360 yiaA/B two helix domain MC28_RS25270 PF02686 Glu-tRNAGln amidotransferase C subunit MC28_RS25275 PF01425 Amidase MC28_RS25280 PF02934 GatB/GatE catalytic domain MC28_RS25280 PF02637 GatB domain MC28_RS25285 PF00781 Diacylglycerol kinase catalytic domain MC28_RS25290 PF13419 Haloacid dehalogenase-like hydrolase MC28_RS25295 PF00202 Aminotransferase class-III MC28_RS25300 PF00158 Sigma-54 interaction domain MC28_RS25305 PF00171 Aldehyde dehydrogenase family MC28_RS25310 PF00893 Small Multidrug Resistance protein MC28_RS25320 PF02073 Thermophilic metalloprotease (M29) MC28_RS25335 PF01773 Na+ dependent nucleoside transporter N-terminus MC28_RS25335 PF07670 Nucleoside recognition MC28_RS25335 PF07662 Na+ dependent nucleoside transporter C-terminus MC28_RS25340 PF01938 TRAM domain MC28_RS25340 PF05958 tRNA (Uracil-5-)-methyltransferase MC28_RS25340 PF13847 Methyltransferase domain MC28_RS25345 PF01207 Dihydrouridine synthase (Dus) MC28_RS25350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS25350 PF13426 PAS domain MC28_RS25350 PF13188 PAS domain MC28_RS25350 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS25350 PF00989 PAS fold MC28_RS25355 PF07308 Protein of unknown function (DUF1456) MC28_RS25370 PF13378 Enolase C-terminal domain-like MC28_RS25370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MC28_RS25380 PF03553 Na+/H+ antiporter family MC28_RS25385 PF01546 Peptidase family M20/M25/M40 MC28_RS25385 PF07687 Peptidase dimerisation domain MC28_RS25395 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC28_RS25395 PF13192 Thioredoxin domain MC28_RS25400 PF00578 AhpC/TSA family MC28_RS25405 PF01636 Phosphotransferase enzyme family MC28_RS25410 PF01008 Initiation factor 2 subunit family MC28_RS25415 PF00596 Class II Aldolase and Adducin N-terminal domain MC28_RS25420 PF01032 FecCD transport family MC28_RS25425 PF01032 FecCD transport family MC28_RS25430 PF01497 Periplasmic binding protein MC28_RS25435 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC28_RS25445 PF12728 Helix-turn-helix domain MC28_RS25470 PF13188 PAS domain MC28_RS25470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS25470 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS25470 PF00989 PAS fold MC28_RS25470 PF13426 PAS domain MC28_RS25490 PF10127 RNA repair pathway DNA polymerase beta family MC28_RS25495 PF07690 Major Facilitator Superfamily MC28_RS25500 PF01266 FAD dependent oxidoreductase MC28_RS25500 PF00355 Rieske [2Fe-2S] domain MC28_RS25510 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS25515 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC28_RS25520 PF00005 ABC transporter MC28_RS25525 PF00672 HAMP domain MC28_RS25525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC28_RS25525 PF12729 Four helix bundle sensory module for signal transduction MC28_RS25530 PF02863 Arginine repressor, C-terminal domain MC28_RS25530 PF01316 Arginine repressor, DNA binding domain MC28_RS25540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MC28_RS25540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MC28_RS25545 PF13520 Amino acid permease MC28_RS25550 PF00696 Amino acid kinase family MC28_RS25565 PF01565 FAD binding domain MC28_RS25565 PF08031 Berberine and berberine like MC28_RS25570 PF16657 Maltogenic Amylase, C-terminal domain MC28_RS25570 PF00128 Alpha amylase, catalytic domain MC28_RS25575 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MC28_RS25575 PF00367 phosphotransferase system, EIIB MC28_RS25575 PF02378 Phosphotransferase system, EIIC MC28_RS25580 PF03372 Endonuclease/Exonuclease/phosphatase family MC28_RS25585 PF01061 ABC-2 type transporter MC28_RS25590 PF01131 DNA topoisomerase MC28_RS25590 PF01751 Toprim domain MC28_RS25595 PF02110 Hydroxyethylthiazole kinase family MC28_RS25600 PF02581 Thiamine monophosphate synthase MC28_RS25605 PF13291 ACT domain MC28_RS25605 PF00291 Pyridoxal-phosphate dependent enzyme MC28_RS25610 PF03605 Anaerobic c4-dicarboxylate membrane transporter MC28_RS25615 PF00672 HAMP domain MC28_RS25615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC28_RS25620 PF00668 Condensation domain MC28_RS25620 PF07993 Male sterility protein MC28_RS25620 PF00550 Phosphopantetheine attachment site MC28_RS25620 PF13193 AMP-binding enzyme C-terminal domain MC28_RS25620 PF00501 AMP-binding enzyme MC28_RS25625 PF01910 Thiamine-binding protein MC28_RS25630 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS25640 PF00005 ABC transporter MC28_RS25645 PF00041 Fibronectin type III domain MC28_RS25645 PF00704 Glycosyl hydrolases family 18 MC28_RS25670 PF00440 Bacterial regulatory proteins, tetR family MC28_RS25670 PF08360 QacR-like protein, C-terminal region MC28_RS25685 PF11700 Vacuole effluxer Atg22 like MC28_RS25700 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MC28_RS25700 PF03129 Anticodon binding domain MC28_RS25700 PF09180 Prolyl-tRNA synthetase, C-terminal MC28_RS25710 PF08239 Bacterial SH3 domain MC28_RS25710 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MC28_RS25710 PF05036 Sporulation related domain MC28_RS25715 PF00480 ROK family MC28_RS25720 PF02342 TerD domain MC28_RS25725 PF02342 TerD domain MC28_RS25730 PF02342 TerD domain MC28_RS25735 PF03741 Integral membrane protein TerC family MC28_RS25740 PF14266 Putative component of 'biosynthetic module' MC28_RS25745 PF05816 Toxic anion resistance protein (TelA) MC28_RS25750 PF00689 Cation transporting ATPase, C-terminus MC28_RS25750 PF00690 Cation transporter/ATPase, N-terminus MC28_RS25755 PF06569 Protein of unknown function (DUF1128) MC28_RS25760 PF01451 Low molecular weight phosphotyrosine protein phosphatase MC28_RS25770 PF03631 Virulence factor BrkB MC28_RS25780 PF00892 EamA-like transporter family MC28_RS25790 PF10502 Signal peptidase, peptidase S26 MC28_RS25800 PF09335 SNARE associated Golgi protein MC28_RS25815 PF16242 Pyridoxamine 5'-phosphate oxidase like MC28_RS25820 PF01699 Sodium/calcium exchanger protein MC28_RS25825 PF14167 YfkD-like protein MC28_RS25830 PF04055 Radical SAM superfamily MC28_RS25830 PF08756 YfkB-like domain MC28_RS25840 PF05681 Fumarate hydratase (Fumerase) MC28_RS25840 PF05683 Fumarase C-terminus MC28_RS25845 PF01522 Polysaccharide deacetylase MC28_RS25850 PF00730 HhH-GPD superfamily base excision DNA repair protein MC28_RS25855 PF05958 tRNA (Uracil-5-)-methyltransferase MC28_RS25855 PF01938 TRAM domain MC28_RS25860 PF00589 Phage integrase family MC28_RS25860 PF14659 Phage integrase, N-terminal SAM-like domain MC28_RS25920 PF01695 IstB-like ATP binding protein MC28_RS26015 PF00589 Phage integrase family MC28_RS26070 PF00574 Clp protease MC28_RS26135 PF01661 Macro domain MC28_RS26155 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MC28_RS26155 PF13457 GW (Gly-Tryp) dipeptide domain MC28_RS26170 PF01416 tRNA pseudouridine synthase MC28_RS26180 PF02954 Bacterial regulatory protein, Fis family MC28_RS26180 PF13426 PAS domain MC28_RS26180 PF00158 Sigma-54 interaction domain MC28_RS26190 PF00324 Amino acid permease MC28_RS26195 PF01546 Peptidase family M20/M25/M40 MC28_RS26195 PF07687 Peptidase dimerisation domain MC28_RS26215 PF04960 Glutaminase MC28_RS26220 PF02378 Phosphotransferase system, EIIC MC28_RS26220 PF00367 phosphotransferase system, EIIB MC28_RS26225 PF00144 Beta-lactamase MC28_RS26245 PF00535 Glycosyl transferase family 2 MC28_RS26250 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MC28_RS26250 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MC28_RS26250 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MC28_RS26255 PF01370 NAD dependent epimerase/dehydratase family MC28_RS26255 PF02911 Formyl transferase, C-terminal domain MC28_RS26255 PF00551 Formyl transferase MC28_RS26260 PF00535 Glycosyl transferase family 2 MC28_RS26265 PF02901 Pyruvate formate lyase-like MC28_RS26265 PF01228 Glycine radical MC28_RS26270 PF04055 Radical SAM superfamily MC28_RS26275 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase MC28_RS26275 PF04101 Glycosyltransferase family 28 C-terminal domain MC28_RS26290 PF01979 Amidohydrolase family MC28_RS26295 PF08338 Domain of unknown function (DUF1731) MC28_RS26295 PF01370 NAD dependent epimerase/dehydratase family MC28_RS26300 PF02631 RecX family MC28_RS26315 PF08176 Small acid-soluble spore protein K family MC28_RS26320 PF14043 WVELL protein MC28_RS26325 PF04307 LexA-binding, inner membrane-associated putative hydrolase MC28_RS26330 PF14815 NUDIX domain MC28_RS26330 PF00730 HhH-GPD superfamily base excision DNA repair protein MC28_RS26340 PF04259 Small, acid-soluble spore protein, gamma-type MC28_RS26345 PF14182 YgaB-like protein MC28_RS26350 PF04167 Protein of unknown function (DUF402) MC28_RS26355 PF00664 ABC transporter transmembrane region MC28_RS26355 PF00005 ABC transporter MC28_RS26360 PF06081 Aromatic acid exporter family member 1 MC28_RS26365 PF01493 GXGXG motif MC28_RS26365 PF01645 Conserved region in glutamate synthase MC28_RS26365 PF04898 Glutamate synthase central domain MC28_RS26365 PF00310 Glutamine amidotransferases class-II MC28_RS26370 PF00202 Aminotransferase class-III MC28_RS26375 PF00005 ABC transporter MC28_RS26390 PF07885 Ion channel MC28_RS26395 PF00578 AhpC/TSA family MC28_RS26400 PF01475 Ferric uptake regulator family MC28_RS26410 PF11023 Zinc-ribbon containing domain MC28_RS26510 PF01709 Transcriptional regulator MC28_RS26515 PF00293 NUDIX domain MC28_RS26515 PF13344 Haloacid dehalogenase-like hydrolase MC28_RS26520 PF00905 Penicillin binding protein transpeptidase domain MC28_RS26520 PF00912 Transglycosylase MC28_RS26525 PF13462 Thioredoxin MC28_RS26535 PF08331 Domain of unknown function (DUF1730) MC28_RS26540 PF12671 Putative amidase domain MC28_RS26545 PF00588 SpoU rRNA Methylase family MC28_RS26550 PF00498 FHA domain MC28_RS26550 PF00990 Diguanylate cyclase, GGDEF domain MC28_RS26550 PF00563 EAL domain MC28_RS26555 PF08298 PrkA AAA domain MC28_RS26555 PF06798 PrkA serine protein kinase C-terminal domain MC28_RS26560 PF04285 Protein of unknown function (DUF444) MC28_RS26570 PF01752 Collagenase MC28_RS26570 PF08453 Peptidase family M9 N-terminal MC28_RS26570 PF18496 Collagenase G catalytic helper subdomain MC28_RS26580 PF01145 SPFH domain / Band 7 family MC28_RS26580 PF15975 Flotillin MC28_RS26585 PF00672 HAMP domain MC28_RS26585 PF02743 Cache domain MC28_RS26585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC28_RS26590 PF17203 Single cache domain 3 MC28_RS26590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS26590 PF00989 PAS fold MC28_RS26590 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MC28_RS26595 PF12431 Transcriptional regulator MC28_RS26595 PF00072 Response regulator receiver domain MC28_RS26600 PF03600 Citrate transporter MC28_RS26625 PF04309 Glycerol-3-phosphate responsive antiterminator MC28_RS26630 PF00005 ABC transporter MC28_RS26630 PF17912 MalK OB fold domain MC28_RS26635 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS26640 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS26645 PF13416 Bacterial extracellular solute-binding protein MC28_RS26650 PF00149 Calcineurin-like phosphoesterase MC28_RS26655 PF00072 Response regulator receiver domain MC28_RS26655 PF00486 Transcriptional regulatory protein, C terminal MC28_RS26660 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS26660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS26670 PF13529 Peptidase_C39 like family MC28_RS26675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC28_RS26675 PF00672 HAMP domain MC28_RS26675 PF02743 Cache domain MC28_RS26680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS26680 PF00989 PAS fold MC28_RS26680 PF17203 Single cache domain 3 MC28_RS26680 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MC28_RS26685 PF00072 Response regulator receiver domain MC28_RS26690 PF03390 2-hydroxycarboxylate transporter family MC28_RS26695 PF03949 Malic enzyme, NAD binding domain MC28_RS26695 PF00390 Malic enzyme, N-terminal domain MC28_RS26705 PF00892 EamA-like transporter family MC28_RS26710 PF00392 Bacterial regulatory proteins, gntR family MC28_RS26710 PF00155 Aminotransferase class I and II MC28_RS26720 PF00672 HAMP domain MC28_RS26720 PF18698 Histidine kinase sensor domain MC28_RS26720 PF00989 PAS fold MC28_RS26720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS26720 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS26725 PF00486 Transcriptional regulatory protein, C terminal MC28_RS26725 PF00072 Response regulator receiver domain MC28_RS26735 PF13508 Acetyltransferase (GNAT) domain MC28_RS26735 PF00583 Acetyltransferase (GNAT) family MC28_RS26740 PF02634 FdhD/NarQ family MC28_RS26745 PF00037 4Fe-4S binding domain MC28_RS26745 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MC28_RS26745 PF01568 Molydopterin dinucleotide binding domain MC28_RS26745 PF00384 Molybdopterin oxidoreductase MC28_RS26745 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MC28_RS26750 PF07849 Protein of unknown function (DUF1641) MC28_RS26760 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MC28_RS26760 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MC28_RS26765 PF13520 Amino acid permease MC28_RS26775 PF01022 Bacterial regulatory protein, arsR family MC28_RS26780 PF00403 Heavy-metal-associated domain MC28_RS26785 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family MC28_RS26785 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain MC28_RS26785 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain MC28_RS26795 PF03413 Peptidase propeptide and YPEB domain MC28_RS26795 PF07504 Fungalysin/Thermolysin Propeptide Motif MC28_RS26795 PF01447 Thermolysin metallopeptidase, catalytic domain MC28_RS26795 PF02868 Thermolysin metallopeptidase, alpha-helical domain MC28_RS26815 PF04294 VanW like protein MC28_RS26820 PF03816 Cell envelope-related transcriptional attenuator domain MC28_RS26825 PF01773 Na+ dependent nucleoside transporter N-terminus MC28_RS26825 PF07662 Na+ dependent nucleoside transporter C-terminus MC28_RS26830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MC28_RS26835 PF00571 CBS domain MC28_RS26835 PF03471 Transporter associated domain MC28_RS26835 PF01595 Cyclin M transmembrane N-terminal domain MC28_RS26840 PF00206 Lyase MC28_RS26840 PF10415 Fumarase C C-terminus MC28_RS26845 PF02652 L-lactate permease MC28_RS26850 PF01022 Bacterial regulatory protein, arsR family MC28_RS26855 PF08141 Small acid-soluble spore protein H family MC28_RS26860 PF00854 POT family MC28_RS26865 PF01497 Periplasmic binding protein MC28_RS26870 PF01032 FecCD transport family MC28_RS26875 PF01032 FecCD transport family MC28_RS26880 PF00005 ABC transporter MC28_RS26885 PF08241 Methyltransferase domain MC28_RS26890 PF00155 Aminotransferase class I and II MC28_RS26895 PF01370 NAD dependent epimerase/dehydratase family MC28_RS26900 PF13344 Haloacid dehalogenase-like hydrolase MC28_RS26900 PF00293 NUDIX domain MC28_RS26905 PF00092 von Willebrand factor type A domain MC28_RS26910 PF07728 AAA domain (dynein-related subfamily) MC28_RS26915 PF13396 Phospholipase_D-nuclease N-terminal MC28_RS26915 PF13091 PLD-like domain MC28_RS26925 PF00990 Diguanylate cyclase, GGDEF domain MC28_RS26925 PF03707 Bacterial signalling protein N terminal repeat MC28_RS26925 PF00563 EAL domain MC28_RS26930 PF13520 Amino acid permease MC28_RS26935 PF00392 Bacterial regulatory proteins, gntR family MC28_RS26935 PF07702 UTRA domain MC28_RS26940 PF02378 Phosphotransferase system, EIIC MC28_RS26940 PF00367 phosphotransferase system, EIIB MC28_RS26945 PF00128 Alpha amylase, catalytic domain MC28_RS26945 PF16657 Maltogenic Amylase, C-terminal domain MC28_RS26960 PF03323 Bacillus/Clostridium GerA spore germination protein MC28_RS26965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS26965 PF07730 Histidine kinase MC28_RS26970 PF00196 Bacterial regulatory proteins, luxR family MC28_RS26970 PF00072 Response regulator receiver domain MC28_RS26975 PF00082 Subtilase family MC28_RS26975 PF05922 Peptidase inhibitor I9 MC28_RS26975 PF02225 PA domain MC28_RS26975 PF13860 FlgD Ig-like domain MC28_RS26980 PF12389 Camelysin metallo-endopeptidase MC28_RS26985 PF01636 Phosphotransferase enzyme family MC28_RS26990 PF01235 Sodium:alanine symporter family MC28_RS26995 PF00005 ABC transporter MC28_RS27000 PF00497 Bacterial extracellular solute-binding proteins, family 3 MC28_RS27005 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS27010 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS27015 PF00324 Amino acid permease MC28_RS27040 PF13280 WYL domain MC28_RS27040 PF08279 HTH domain MC28_RS27045 PF01872 RibD C-terminal domain MC28_RS27050 PF00672 HAMP domain MC28_RS27050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS27050 PF18698 Histidine kinase sensor domain MC28_RS27050 PF00512 His Kinase A (phospho-acceptor) domain MC28_RS27050 PF00989 PAS fold MC28_RS27055 PF00486 Transcriptional regulatory protein, C terminal MC28_RS27055 PF00072 Response regulator receiver domain MC28_RS27065 PF00916 Sulfate permease family MC28_RS27065 PF01740 STAS domain MC28_RS27070 PF00582 Universal stress protein family MC28_RS27080 PF07690 Major Facilitator Superfamily MC28_RS27085 PF01047 MarR family MC28_RS27090 PF07690 Major Facilitator Superfamily MC28_RS27095 PF00356 Bacterial regulatory proteins, lacI family MC28_RS27100 PF00294 pfkB family carbohydrate kinase MC28_RS27105 PF05025 RbsD / FucU transport protein family MC28_RS27110 PF00005 ABC transporter MC28_RS27115 PF02653 Branched-chain amino acid transport system / permease component MC28_RS27120 PF13407 Periplasmic binding protein domain MC28_RS27125 PF00923 Transaldolase/Fructose-6-phosphate aldolase MC28_RS27130 PF05547 Immune inhibitor A peptidase M6 MC28_RS27150 PF00107 Zinc-binding dehydrogenase MC28_RS27150 PF08240 Alcohol dehydrogenase GroES-like domain MC28_RS27160 PF00882 Zinc dependent phospholipase C MC28_RS27165 PF03372 Endonuclease/Exonuclease/phosphatase family MC28_RS27195 PF02673 Bacitracin resistance protein BacA MC28_RS27200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MC28_RS27200 PF00672 HAMP domain MC28_RS27200 PF02743 Cache domain MC28_RS27205 PF06725 3D domain MC28_RS27205 PF01476 LysM domain MC28_RS27210 PF01381 Helix-turn-helix MC28_RS27220 PF04203 Sortase domain MC28_RS27230 PF00854 POT family MC28_RS27235 PF05525 Branched-chain amino acid transport protein MC28_RS27250 PF00324 Amino acid permease MC28_RS27255 PF00860 Permease family MC28_RS27275 PF02254 TrkA-N domain MC28_RS27275 PF00999 Sodium/hydrogen exchanger family MC28_RS27275 PF02080 TrkA-C domain MC28_RS27285 PF00510 Cytochrome c oxidase subunit III MC28_RS27290 PF00115 Cytochrome C and Quinol oxidase polypeptide I MC28_RS27295 PF02790 Cytochrome C oxidase subunit II, transmembrane domain MC28_RS27300 PF00324 Amino acid permease MC28_RS27305 PF13529 Peptidase_C39 like family MC28_RS27310 PF01546 Peptidase family M20/M25/M40 MC28_RS27310 PF07687 Peptidase dimerisation domain MC28_RS27315 PF11755 Protein of unknown function (DUF3311) MC28_RS27320 PF00474 Sodium:solute symporter family MC28_RS27325 PF03323 Bacillus/Clostridium GerA spore germination protein MC28_RS27330 PF03845 Spore germination protein MC28_RS27335 PF05504 Spore germination B3/ GerAC like, C-terminal MC28_RS27340 PF02421 Ferrous iron transport protein B MC28_RS27340 PF17910 FeoB cytosolic helical domain MC28_RS27340 PF07664 Ferrous iron transport protein B C terminus MC28_RS27340 PF07670 Nucleoside recognition MC28_RS27345 PF07670 Nucleoside recognition MC28_RS27345 PF17910 FeoB cytosolic helical domain MC28_RS27345 PF07664 Ferrous iron transport protein B C terminus MC28_RS27345 PF02421 Ferrous iron transport protein B MC28_RS27350 PF04023 FeoA domain MC28_RS27350 PF07670 Nucleoside recognition MC28_RS27350 PF17910 FeoB cytosolic helical domain MC28_RS27350 PF02421 Ferrous iron transport protein B MC28_RS27350 PF07664 Ferrous iron transport protein B C terminus MC28_RS27355 PF12849 PBP superfamily domain MC28_RS27360 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS27365 PF00528 Binding-protein-dependent transport system inner membrane component MC28_RS27370 PF00873 AcrB/AcrD/AcrF family MC28_RS27505 PF03070 TENA/THI-4/PQQC family MC28_RS27595 PF00005 ABC transporter MC28_RS27690 PF00881 Nitroreductase family MC28_RS27700 PF04293 SpoVR like protein MC28_RS27765 PF00581 Rhodanese-like domain MC28_RS27795 PF01925 Sulfite exporter TauE/SafE MC28_RS27840 PF00005 ABC transporter MC28_RS28015 PF04293 SpoVR like protein MC28_RS28020 PF04293 SpoVR like protein MC28_RS28045 PF18113 Rubredoxin binding C-terminal domain MC28_RS28045 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC28_RS28055 PF00581 Rhodanese-like domain MC28_RS28055 PF00753 Metallo-beta-lactamase superfamily MC28_RS28085 PF01925 Sulfite exporter TauE/SafE MC28_RS28095 PF03816 Cell envelope-related transcriptional attenuator domain MC28_RS28175 PF02735 Ku70/Ku80 beta-barrel domain MC28_RS28215 PF01418 Helix-turn-helix domain, rpiR family MC28_RS28215 PF01380 SIS domain MC28_RS28225 PF13580 SIS domain MC28_RS28485 PF04293 SpoVR like protein MC28_RS28530 PF00581 Rhodanese-like domain MC28_RS28530 PF00753 Metallo-beta-lactamase superfamily MC28_RS28535 PF00581 Rhodanese-like domain MC28_RS28535 PF00753 Metallo-beta-lactamase superfamily MC28_RS28585 PF00107 Zinc-binding dehydrogenase MC28_RS28585 PF08240 Alcohol dehydrogenase GroES-like domain MC28_RS28790 PF02378 Phosphotransferase system, EIIC MC28_RS28790 PF00367 phosphotransferase system, EIIB MC28_RS28795 PF00367 phosphotransferase system, EIIB MC28_RS28795 PF02378 Phosphotransferase system, EIIC MC28_RS28835 PF00440 Bacterial regulatory proteins, tetR family MC28_RS28835 PF17934 Tetracyclin repressor-like, C-terminal domain MC28_RS28945 PF04286 Protein of unknown function (DUF445) MC28_RS28955 PF00205 Thiamine pyrophosphate enzyme, central domain MC28_RS28955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MC28_RS28955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MC28_RS29095 PF05544 Proline racemase MC28_RS29175 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MC28_RS29175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS29190 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) MC28_RS29190 PF04851 Type III restriction enzyme, res subunit MC28_RS29190 PF08463 EcoEI R protein C-terminal MC28_RS29190 PF00271 Helicase conserved C-terminal domain MC28_RS29200 PF00271 Helicase conserved C-terminal domain MC28_RS29200 PF00270 DEAD/DEAH box helicase MC28_RS29445 PF04293 SpoVR like protein MC28_RS29470 PF07992 Pyridine nucleotide-disulphide oxidoreductase MC28_RS29470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MC28_RS29720 PF01177 Asp/Glu/Hydantoin racemase MC28_RS29925 PF02423 Ornithine cyclodeaminase/mu-crystallin family MC28_RS30185 PF00005 ABC transporter MC28_RS30210 PF00860 Permease family MC28_RS30395 PF00999 Sodium/hydrogen exchanger family MC28_RS30420 PF00367 phosphotransferase system, EIIB MC28_RS30420 PF02378 Phosphotransferase system, EIIC MC28_RS30505 PF00171 Aldehyde dehydrogenase family MC28_RS30520 PF00005 ABC transporter MC28_RS30520 PF00664 ABC transporter transmembrane region MC28_RS30615 PF00501 AMP-binding enzyme MC28_RS30615 PF13193 AMP-binding enzyme C-terminal domain MC28_RS30625 PF00916 Sulfate permease family MC28_RS30625 PF01740 STAS domain MC28_RS30745 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MC28_RS30745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MC28_RS30875 PF01066 CDP-alcohol phosphatidyltransferase MC28_RS30965 PF05547 Immune inhibitor A peptidase M6 MC28_RS31465 PF03814 Potassium-transporting ATPase A subunit MC28_RS31550 PF03323 Bacillus/Clostridium GerA spore germination protein MC28_RS31710 PF05067 Manganese containing catalase MC28_RS31905 PF00171 Aldehyde dehydrogenase family MC28_RS31980 PF17210 SdrD B-like domain MC28_RS31980 PF17961 Bacterial Ig domain MC28_RS31980 PF00746 LPXTG cell wall anchor motif MC28_RS31980 PF10425 C-terminus of bacterial fibrinogen-binding adhesin MC28_RS31980 PF04650 YSIRK type signal peptide MC28_RS32115 PF00083 Sugar (and other) transporter MC28_RS32255 PF07690 Major Facilitator Superfamily MC28_RS32710 PF03099 Biotin/lipoate A/B protein ligase family MC28_RS32710 PF10437 Bacterial lipoate protein ligase C-terminus MC28_RS32810 PF00892 EamA-like transporter family MC28_RS32905 PF00202 Aminotransferase class-III MC28_RS32925 PF00762 Ferrochelatase MC28_RS33020 PF02861 Clp amino terminal domain, pathogenicity island component MC28_RS33020 PF17871 AAA lid domain MC28_RS33020 PF00004 ATPase family associated with various cellular activities (AAA) MC28_RS33020 PF07724 AAA domain (Cdc48 subfamily) MC28_RS33020 PF10431 C-terminal, D2-small domain, of ClpB protein MC28_RS33145 PF13396 Phospholipase_D-nuclease N-terminal MC28_RS33145 PF13091 PLD-like domain MC28_RS33295 PF10425 C-terminus of bacterial fibrinogen-binding adhesin MC28_RS33295 PF00746 LPXTG cell wall anchor motif MC28_RS33295 PF04650 YSIRK type signal peptide MC28_RS33295 PF17210 SdrD B-like domain MC28_RS33295 PF17961 Bacterial Ig domain MC28_RS33300 PF01471 Putative peptidoglycan binding domain MC28_RS33300 PF01510 N-acetylmuramoyl-L-alanine amidase MC28_RS33305 PF02733 Dak1 domain MC28_RS33325 PF06458 MucBP domain