locus-tag	class	description
CT43_RS00005	PF11638	DnaA N-terminal domain
CT43_RS00005	PF00308	Bacterial dnaA  protein
CT43_RS00005	PF08299	Bacterial dnaA protein helix-turn-helix
CT43_RS00010	PF02768	DNA polymerase III beta subunit, C-terminal domain
CT43_RS00010	PF00712	DNA polymerase III beta subunit, N-terminal domain
CT43_RS00010	PF02767	DNA polymerase III beta subunit, central domain
CT43_RS00020	PF02463	RecF/RecN/SMC N terminal domain
CT43_RS00025	PF00204	DNA gyrase B
CT43_RS00025	PF00986	DNA gyrase B subunit, carboxyl terminus
CT43_RS00025	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS00025	PF01751	Toprim domain
CT43_RS00050	PF14175	YaaC-like Protein
CT43_RS00055	PF00478	IMP dehydrogenase / GMP reductase domain
CT43_RS00055	PF00571	CBS domain
CT43_RS00060	PF07943	Penicillin-binding protein 5, C-terminal domain
CT43_RS00060	PF00768	D-alanyl-D-alanine carboxypeptidase
CT43_RS00065	PF01680	SOR/SNZ family
CT43_RS00070	PF01174	SNO glutamine amidotransferase family
CT43_RS00075	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CT43_RS00075	PF02403	Seryl-tRNA synthetase N-terminal domain
CT43_RS00090	PF01712	Deoxynucleoside kinase
CT43_RS00095	PF01712	Deoxynucleoside kinase
CT43_RS00100	PF00857	Isochorismatase family
CT43_RS00105	PF14437	MafB19-like deaminase
CT43_RS00110	PF12169	DNA polymerase III subunits gamma and tau domain III
CT43_RS00115	PF02575	YbaB/EbfC DNA-binding family
CT43_RS00120	PF02132	RecR protein
CT43_RS00120	PF13662	Toprim domain
CT43_RS00125	PF10704	Protein of unknown function (DUF2508)
CT43_RS00130	PF07441	SigmaK-factor processing regulatory protein BofA
CT43_RS00155	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
CT43_RS00155	PF01276	Orn/Lys/Arg decarboxylase, major domain
CT43_RS00160	PF02223	Thymidylate kinase
CT43_RS00165	PF09115	DNA polymerase III, delta subunit, C terminal
CT43_RS00170	PF04468	PSP1 C-terminal conserved region
CT43_RS00175	PF06156	Initiation control protein YabA
CT43_RS00180	PF05175	Methyltransferase small domain
CT43_RS00185	PF01541	GIY-YIG catalytic domain
CT43_RS00190	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CT43_RS00195	PF18277	AbrB C-terminal domain
CT43_RS00195	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
CT43_RS00200	PF08264	Anticodon-binding domain of tRNA
CT43_RS00200	PF09334	tRNA synthetases class I (M)
CT43_RS00200	PF01588	Putative tRNA binding domain
CT43_RS00205	PF01026	TatD related DNase
CT43_RS00210	PF13331	Domain of unknown function (DUF4093)
CT43_RS00210	PF13662	Toprim domain
CT43_RS00215	PF00398	Ribosomal RNA adenine dimethylase
CT43_RS00220	PF05582	YabG peptidase U57
CT43_RS00225	PF06257	Biofilm formation stimulator VEG
CT43_RS00230	PF00269	Small, acid-soluble spore proteins, alpha/beta type
CT43_RS00235	PF08544	GHMP kinases C terminal 
CT43_RS00235	PF00288	GHMP kinases N terminal domain
CT43_RS00240	PF00156	Phosphoribosyl transferase domain
CT43_RS00240	PF09182	Bacterial purine repressor, N-terminal
CT43_RS00245	PF01042	Endoribonuclease L-PSP
CT43_RS00250	PF04026	SpoVG
CT43_RS00255	PF00483	Nucleotidyl transferase
CT43_RS00255	PF00132	Bacterial transferase hexapeptide (six repeats)
CT43_RS00260	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
CT43_RS00260	PF14572	Phosphoribosyl synthetase-associated domain
CT43_RS00265	PF01195	Peptidyl-tRNA hydrolase
CT43_RS00275	PF03461	TRCF domain
CT43_RS00275	PF00271	Helicase conserved C-terminal domain
CT43_RS00275	PF00270	DEAD/DEAH box helicase
CT43_RS00275	PF02559	CarD-like/TRCF domain
CT43_RS00275	PF17757	UvrB interaction domain
CT43_RS00280	PF15714	Stage V sporulation protein T C-terminal, transcription factor
CT43_RS00280	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
CT43_RS00285	PF01943	Polysaccharide biosynthesis protein
CT43_RS00285	PF14667	Polysaccharide biosynthesis C-terminal domain
CT43_RS00290	PF03819	MazG nucleotide pyrophosphohydrolase domain
CT43_RS00290	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CT43_RS00295	PF01479	S4 domain
CT43_RS00300	PF07873	YabP family
CT43_RS00305	PF09578	Spore cortex protein YabQ (Spore_YabQ)
CT43_RS00315	PF00575	S1 RNA binding domain
CT43_RS00330	PF07228	Stage II sporulation protein E (SpoIIE)
CT43_RS00340	PF00156	Phosphoribosyl transferase domain
CT43_RS00345	PF01434	Peptidase family M41
CT43_RS00345	PF06480	FtsH Extracellular
CT43_RS00345	PF17862	AAA+ lid domain
CT43_RS00345	PF00004	ATPase family associated with various cellular activities (AAA)
CT43_RS00350	PF03309	Type III pantothenate kinase
CT43_RS00355	PF01430	Hsp33 protein
CT43_RS00360	PF00291	Pyridoxal-phosphate dependent enzyme
CT43_RS00365	PF00425	chorismate binding enzyme
CT43_RS00365	PF04715	Anthranilate synthase component I, N terminal region
CT43_RS00370	PF00117	Glutamine amidotransferase class-I
CT43_RS00375	PF01063	Amino-transferase class IV
CT43_RS00380	PF00809	Pterin binding enzyme
CT43_RS00385	PF02152	Dihydroneopterin aldolase
CT43_RS00390	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
CT43_RS00395	PF01381	Helix-turn-helix
CT43_RS00400	PF01207	Dihydrouridine synthase (Dus)
CT43_RS00405	PF01336	OB-fold nucleic acid binding domain
CT43_RS00405	PF00152	tRNA synthetases class II (D, K and N) 
CT43_RS00425	PF00155	Aminotransferase class I and II
CT43_RS00425	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS00430	PF01619	Proline dehydrogenase
CT43_RS00450	PF17727	CtsR C-terminal dimerization domain
CT43_RS00450	PF05848	CtsR N-terminal HTH domain
CT43_RS00455	PF02151	UvrB/uvrC motif
CT43_RS00460	PF00217	ATP:guanido phosphotransferase, C-terminal catalytic domain
CT43_RS00465	PF17871	AAA lid domain
CT43_RS00465	PF02861	Clp amino terminal domain, pathogenicity island component
CT43_RS00465	PF10431	C-terminal, D2-small domain, of ClpB protein 
CT43_RS00465	PF00004	ATPase family associated with various cellular activities (AAA)
CT43_RS00465	PF07724	AAA domain (Cdc48 subfamily)
CT43_RS00470	PF18073	Rubredoxin metal binding domain
CT43_RS00475	PF10635	DisA bacterial checkpoint controller linker region 
CT43_RS00475	PF02457	DisA bacterial checkpoint controller nucleotide-binding
CT43_RS00485	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
CT43_RS00490	PF02542	YgbB family
CT43_RS00495	PF00749	tRNA synthetases class I (E and Q), catalytic domain
CT43_RS00500	PF06426	Serine acetyltransferase, N-terminal 
CT43_RS00500	PF00132	Bacterial transferase hexapeptide (six repeats)
CT43_RS00505	PF09190	DALR domain
CT43_RS00505	PF01406	tRNA synthetases class I (C) catalytic domain
CT43_RS00510	PF00636	Ribonuclease III domain
CT43_RS00515	PF08032	RNA 2'-O ribose methyltransferase substrate binding
CT43_RS00515	PF00588	SpoU rRNA Methylase family
CT43_RS00520	PF05991	YacP-like NYN domain
CT43_RS00525	PF08281	Sigma-70, region 4
CT43_RS00525	PF04542	Sigma-70 region 2 
CT43_RS00530	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
CT43_RS00535	PF02357	Transcription termination factor nusG
CT43_RS00535	PF00467	KOW motif
CT43_RS00540	PF00298	Ribosomal protein L11, RNA binding domain
CT43_RS00540	PF03946	Ribosomal protein L11, N-terminal domain
CT43_RS00545	PF00687	Ribosomal protein L1p/L10e family
CT43_RS00550	PF00466	Ribosomal protein L10
CT43_RS00555	PF16320	Ribosomal protein L7/L12 dimerisation domain
CT43_RS00555	PF00542	Ribosomal protein L7/L12 C-terminal domain
CT43_RS00560	PF05175	Methyltransferase small domain
CT43_RS00565	PF10385	RNA polymerase beta subunit external 1 domain
CT43_RS00565	PF04560	RNA polymerase Rpb2, domain 7
CT43_RS00565	PF00562	RNA polymerase Rpb2, domain 6
CT43_RS00565	PF04563	RNA polymerase beta subunit
CT43_RS00565	PF04565	RNA polymerase Rpb2, domain 3
CT43_RS00565	PF04561	RNA polymerase Rpb2, domain 2
CT43_RS00570	PF00623	RNA polymerase Rpb1, domain 2
CT43_RS00570	PF04997	RNA polymerase Rpb1, domain 1
CT43_RS00570	PF04998	RNA polymerase Rpb1, domain 5
CT43_RS00570	PF05000	RNA polymerase Rpb1, domain 4
CT43_RS00570	PF04983	RNA polymerase Rpb1, domain 3
CT43_RS00575	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
CT43_RS00580	PF00164	Ribosomal protein S12/S23
CT43_RS00585	PF00177	Ribosomal protein S7p/S5e
CT43_RS00590	PF14492	Elongation Factor G, domain II
CT43_RS00590	PF00679	Elongation factor G C-terminus
CT43_RS00590	PF03764	Elongation factor G, domain IV
CT43_RS00590	PF03144	Elongation factor Tu domain 2
CT43_RS00590	PF00009	Elongation factor Tu GTP binding domain
CT43_RS00595	PF03143	Elongation factor Tu C-terminal domain
CT43_RS00595	PF03144	Elongation factor Tu domain 2
CT43_RS00595	PF00009	Elongation factor Tu GTP binding domain
CT43_RS00600	PF00338	Ribosomal protein S10p/S20e
CT43_RS00605	PF00297	Ribosomal protein L3
CT43_RS00610	PF00573	Ribosomal protein L4/L1 family
CT43_RS00615	PF00276	Ribosomal protein L23
CT43_RS00620	PF00181	Ribosomal Proteins L2, RNA binding domain
CT43_RS00620	PF03947	Ribosomal Proteins L2, C-terminal domain
CT43_RS00625	PF00203	Ribosomal protein S19
CT43_RS00630	PF00237	Ribosomal protein L22p/L17e
CT43_RS00635	PF00189	Ribosomal protein S3, C-terminal domain
CT43_RS00635	PF07650	KH domain
CT43_RS00640	PF00252	Ribosomal protein L16p/L10e
CT43_RS00645	PF00831	Ribosomal L29 protein
CT43_RS00650	PF00366	Ribosomal protein S17
CT43_RS00655	PF00238	Ribosomal protein L14p/L23e
CT43_RS00665	PF00673	ribosomal L5P family C-terminus
CT43_RS00665	PF00281	Ribosomal protein L5
CT43_RS00670	PF00253	Ribosomal protein S14p/S29e
CT43_RS00675	PF00410	Ribosomal protein S8
CT43_RS00680	PF00347	Ribosomal protein L6
CT43_RS00685	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
CT43_RS00690	PF03719	Ribosomal protein S5, C-terminal domain
CT43_RS00690	PF00333	Ribosomal protein S5, N-terminal domain
CT43_RS00695	PF00327	Ribosomal protein L30p/L7e
CT43_RS00700	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
CT43_RS00705	PF00344	SecY translocase
CT43_RS00710	PF05191	Adenylate kinase, active site lid
CT43_RS00715	PF00557	Metallopeptidase family M24
CT43_RS00720	PF01176	Translation initiation factor 1A / IF-1
CT43_RS00725	PF00444	Ribosomal protein L36
CT43_RS00730	PF00416	Ribosomal protein S13/S18
CT43_RS00735	PF00411	Ribosomal protein S11
CT43_RS00740	PF01000	RNA polymerase Rpb3/RpoA insert domain
CT43_RS00740	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
CT43_RS00740	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
CT43_RS00745	PF01196	Ribosomal protein L17
CT43_RS00750	PF00005	ABC transporter
CT43_RS00755	PF00005	ABC transporter
CT43_RS00760	PF02361	Cobalt transport protein
CT43_RS00765	PF01416	tRNA pseudouridine synthase
CT43_RS00770	PF00572	Ribosomal protein L13
CT43_RS00775	PF00380	Ribosomal protein S9/S16
CT43_RS00785	PF01520	N-acetylmuramoyl-L-alanine amidase
CT43_RS00790	PF10609	NUBPL iron-transfer P-loop NTPase
CT43_RS00795	PF17898	Spore germination GerD central core domain
CT43_RS00800	PF14089	KinB-signalling pathway activation in sporulation
CT43_RS00805	PF01522	Polysaccharide deacetylase
CT43_RS00875	PF02595	Glycerate kinase family
CT43_RS00880	PF00491	Arginase family
CT43_RS00885	PF02457	DisA bacterial checkpoint controller nucleotide-binding
CT43_RS00895	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CT43_RS00895	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CT43_RS00895	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CT43_RS00895	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CT43_RS00905	PF01380	SIS domain
CT43_RS00910	PF00326	Prolyl oligopeptidase family
CT43_RS00910	PF00930	Dipeptidyl peptidase IV (DPP IV) N-terminal region
CT43_RS00935	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS00940	PF09383	NIL domain
CT43_RS00940	PF00005	ABC transporter
CT43_RS00945	PF03180	NLPA lipoprotein
CT43_RS00950	PF08240	Alcohol dehydrogenase GroES-like domain
CT43_RS00950	PF00107	Zinc-binding dehydrogenase
CT43_RS00960	PF01565	FAD binding domain 
CT43_RS00965	PF07690	Major Facilitator Superfamily
CT43_RS00975	PF07690	Major Facilitator Superfamily
CT43_RS00995	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS01000	PF12911	N-terminal TM domain of oligopeptide transport permease C
CT43_RS01000	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS01005	PF00005	ABC transporter
CT43_RS01005	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CT43_RS01010	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CT43_RS01010	PF00005	ABC transporter
CT43_RS01015	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CT43_RS01030	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CT43_RS01035	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CT43_RS01040	PF00248	Aldo/keto reductase family
CT43_RS01045	PF03807	NADP oxidoreductase coenzyme F420-dependent
CT43_RS01045	PF14748	Pyrroline-5-carboxylate reductase dimerisation
CT43_RS01050	PF04973	Nicotinamide mononucleotide transporter
CT43_RS01055	PF06800	Sugar transport protein
CT43_RS01060	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS01070	PF12728	Helix-turn-helix domain
CT43_RS01070	PF12727	PBP superfamily domain
CT43_RS01075	PF03466	LysR substrate binding domain
CT43_RS01075	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CT43_RS01080	PF00892	EamA-like transporter family
CT43_RS01085	PF14142	YrzO-like protein
CT43_RS01090	PF01553	Acyltransferase
CT43_RS01095	PF00356	Bacterial regulatory proteins, lacI family
CT43_RS01095	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
CT43_RS01105	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CT43_RS01105	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_RS01125	PF10096	Uncharacterized protein conserved in bacteria (DUF2334)
CT43_RS01145	PF12848	ABC transporter
CT43_RS01145	PF00005	ABC transporter
CT43_RS01145	PF16326	ABC transporter C-terminal domain
CT43_RS01155	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CT43_RS01160	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS01165	PF12911	N-terminal TM domain of oligopeptide transport permease C
CT43_RS01165	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS01170	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CT43_RS01170	PF00005	ABC transporter
CT43_RS01175	PF00005	ABC transporter
CT43_RS01175	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CT43_RS01200	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CT43_RS01205	PF01557	Fumarylacetoacetate (FAA) hydrolase family
CT43_RS01215	PF13520	Amino acid permease
CT43_RS01225	PF07690	Major Facilitator Superfamily
CT43_RS01230	PF07478	D-ala D-ala ligase C-terminus
CT43_RS01230	PF01820	D-ala D-ala ligase N-terminus
CT43_RS01235	PF02875	Mur ligase family, glutamate ligase domain
CT43_RS01235	PF08245	Mur ligase middle domain
CT43_RS01235	PF01225	Mur ligase family, catalytic domain
CT43_RS01240	PF00270	DEAD/DEAH box helicase
CT43_RS01240	PF00271	Helicase conserved C-terminal domain
CT43_RS01245	PF03851	UV-endonuclease UvdE
CT43_RS01250	PF01694	Rhomboid family
CT43_RS01255	PF01648	4'-phosphopantetheinyl transferase superfamily
CT43_RS01265	PF01168	Alanine racemase, N-terminal domain
CT43_RS01265	PF00842	Alanine racemase, C-terminal domain
CT43_RS01270	PF01402	Ribbon-helix-helix protein, copG family
CT43_RS01275	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system
CT43_RS01285	PF10263	SprT-like family
CT43_RS01285	PF17283	SprT-like zinc ribbon domain
CT43_RS01375	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
CT43_RS01380	PF00814	Glycoprotease family
CT43_RS01385	PF00583	Acetyltransferase (GNAT) family
CT43_RS01390	PF00814	Glycoprotease family
CT43_RS01395	PF16326	ABC transporter C-terminal domain
CT43_RS01395	PF12848	ABC transporter
CT43_RS01395	PF00005	ABC transporter
CT43_RS01400	PF02629	CoA binding domain
CT43_RS01400	PF06971	Putative DNA-binding protein N-terminus
CT43_RS01410	PF02517	CPBP intramembrane metalloprotease
CT43_RS01415	PF00166	Chaperonin 10 Kd subunit
CT43_RS01420	PF00118	TCP-1/cpn60 chaperonin family
CT43_RS01430	PF04740	LXG domain of WXG superfamily
CT43_RS01430	PF14449	Pre-toxin TG
CT43_RS01440	PF02540	NAD synthase
CT43_RS01440	PF00958	GMP synthase C terminal domain
CT43_RS01440	PF00117	Glutamine amidotransferase class-I
CT43_RS01445	PF00860	Permease family
CT43_RS01450	PF00072	Response regulator receiver domain
CT43_RS01450	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS01455	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS01455	PF16736	Single Cache-like 
CT43_RS01455	PF00989	PAS fold
CT43_RS01455	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS01480	PF01323	DSBA-like thioredoxin domain
CT43_RS01500	PF05045	Rhamnan synthesis protein F
CT43_RS01500	PF14307	Glycosyltransferase WbsX
CT43_RS01505	PF00665	Integrase core domain
CT43_RS01510	PF01695	IstB-like ATP binding protein
CT43_RS01515	PF14307	Glycosyltransferase WbsX
CT43_RS01515	PF05045	Rhamnan synthesis protein F
CT43_RS01535	PF01370	NAD dependent epimerase/dehydratase family
CT43_RS01545	PF00535	Glycosyl transferase family 2
CT43_RS01565	PF00892	EamA-like transporter family
CT43_RS01590	PF00731	AIR carboxylase
CT43_RS01595	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
CT43_RS01595	PF02222	ATP-grasp domain
CT43_RS01600	PF10397	Adenylosuccinate lyase C-terminus
CT43_RS01600	PF00206	Lyase
CT43_RS01605	PF01259	SAICAR synthetase
CT43_RS01610	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
CT43_RS01620	PF00586	AIR synthase related protein, N-terminal domain
CT43_RS01620	PF02769	AIR synthase related protein, C-terminal domain
CT43_RS01620	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
CT43_RS01625	PF00156	Phosphoribosyl transferase domain
CT43_RS01630	PF00586	AIR synthase related protein, N-terminal domain
CT43_RS01630	PF02769	AIR synthase related protein, C-terminal domain
CT43_RS01635	PF00551	Formyl transferase
CT43_RS01640	PF02142	MGS-like domain
CT43_RS01640	PF01808	AICARFT/IMPCHase bienzyme
CT43_RS01645	PF02844	Phosphoribosylglycinamide synthetase, N domain
CT43_RS01645	PF02843	Phosphoribosylglycinamide synthetase, C domain
CT43_RS01645	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
CT43_RS01655	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CT43_RS01655	PF03466	LysR substrate binding domain
CT43_RS01675	PF01884	PcrB family
CT43_RS01680	PF00580	UvrD/REP helicase N-terminal domain
CT43_RS01680	PF13361	UvrD-like helicase C-terminal domain
CT43_RS01685	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
CT43_RS01685	PF12826	Helix-hairpin-helix motif
CT43_RS01685	PF01653	NAD-dependent DNA ligase adenylation domain
CT43_RS01685	PF03120	NAD-dependent DNA ligase OB-fold domain
CT43_RS01685	PF00533	BRCA1 C Terminus (BRCT) domain
CT43_RS01690	PF07537	CamS sex pheromone cAM373 precursor
CT43_RS01695	PF01925	Sulfite exporter TauE/SafE
CT43_RS01700	PF00171	Aldehyde dehydrogenase family
CT43_RS01705	PF00857	Isochorismatase family
CT43_RS01715	PF00005	ABC transporter
CT43_RS01715	PF09383	NIL domain
CT43_RS01720	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS01725	PF03180	NLPA lipoprotein
CT43_RS01735	PF17886	HSP20-like domain found in ArsA
CT43_RS01735	PF02374	Anion-transporting ATPase
CT43_RS01740	PF01047	MarR family
CT43_RS01745	PF05360	yiaA/B two helix domain
CT43_RS01750	PF02686	Glu-tRNAGln amidotransferase C subunit
CT43_RS01755	PF01425	Amidase
CT43_RS01760	PF02637	GatB domain
CT43_RS01760	PF02934	GatB/GatE catalytic domain
CT43_RS01765	PF00781	Diacylglycerol kinase catalytic domain
CT43_RS01770	PF13419	Haloacid dehalogenase-like hydrolase
CT43_RS01775	PF00202	Aminotransferase class-III
CT43_RS01780	PF00158	Sigma-54 interaction domain
CT43_RS01785	PF00171	Aldehyde dehydrogenase family
CT43_RS01790	PF00893	Small Multidrug Resistance protein
CT43_RS01800	PF02073	Thermophilic metalloprotease (M29)
CT43_RS01815	PF01773	Na+ dependent nucleoside transporter N-terminus
CT43_RS01815	PF07662	Na+ dependent nucleoside transporter C-terminus
CT43_RS01815	PF07670	Nucleoside recognition
CT43_RS01820	PF05958	tRNA (Uracil-5-)-methyltransferase
CT43_RS01820	PF13847	Methyltransferase domain
CT43_RS01820	PF01938	TRAM domain
CT43_RS01825	PF01207	Dihydrouridine synthase (Dus)
CT43_RS01830	PF07308	Protein of unknown function (DUF1456)
CT43_RS01845	PF13378	Enolase C-terminal domain-like
CT43_RS01845	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
CT43_RS01855	PF03553	Na+/H+ antiporter family
CT43_RS01860	PF01546	Peptidase family M20/M25/M40
CT43_RS01860	PF07687	Peptidase dimerisation domain
CT43_RS01875	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CT43_RS01875	PF13192	Thioredoxin domain
CT43_RS01880	PF00578	AhpC/TSA family
CT43_RS01885	PF01636	Phosphotransferase enzyme family
CT43_RS01890	PF01008	Initiation factor 2 subunit family
CT43_RS01895	PF00596	Class II Aldolase and Adducin N-terminal domain
CT43_RS01900	PF01032	FecCD transport family
CT43_RS01905	PF01032	FecCD transport family
CT43_RS01910	PF01497	Periplasmic binding protein
CT43_RS01915	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CT43_RS01925	PF12728	Helix-turn-helix domain
CT43_RS01950	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS01950	PF13426	PAS domain
CT43_RS01950	PF00989	PAS fold
CT43_RS01950	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS01950	PF13188	PAS domain
CT43_RS01970	PF10127	RNA repair pathway DNA polymerase beta family
CT43_RS01980	PF00355	Rieske [2Fe-2S] domain
CT43_RS01980	PF01266	FAD dependent oxidoreductase
CT43_RS01995	PF01609	Transposase DDE domain
CT43_RS02000	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS02005	PF00497	Bacterial extracellular solute-binding proteins, family 3
CT43_RS02010	PF00005	ABC transporter
CT43_RS02015	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CT43_RS02015	PF12729	Four helix bundle sensory module for signal transduction
CT43_RS02015	PF00672	HAMP domain
CT43_RS02020	PF02863	Arginine repressor, C-terminal domain
CT43_RS02020	PF01316	Arginine repressor, DNA binding domain
CT43_RS02030	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CT43_RS02030	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
CT43_RS02035	PF13520	Amino acid permease
CT43_RS02040	PF00696	Amino acid kinase family
CT43_RS02045	PF13545	Crp-like helix-turn-helix domain
CT43_RS02045	PF00027	Cyclic nucleotide-binding domain
CT43_RS02055	PF08031	Berberine and berberine like 
CT43_RS02055	PF01565	FAD binding domain 
CT43_RS02060	PF00128	Alpha amylase, catalytic domain
CT43_RS02060	PF16657	Maltogenic Amylase, C-terminal domain
CT43_RS02065	PF02378	Phosphotransferase system, EIIC 
CT43_RS02065	PF00367	phosphotransferase system, EIIB
CT43_RS02065	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CT43_RS02070	PF03372	Endonuclease/Exonuclease/phosphatase family
CT43_RS02075	PF01061	ABC-2 type transporter
CT43_RS02080	PF01751	Toprim domain
CT43_RS02080	PF01131	DNA topoisomerase
CT43_RS02085	PF02110	Hydroxyethylthiazole kinase family
CT43_RS02090	PF02581	Thiamine monophosphate synthase
CT43_RS02095	PF03605	Anaerobic c4-dicarboxylate membrane transporter
CT43_RS02100	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CT43_RS02100	PF00672	HAMP domain
CT43_RS02105	PF00668	Condensation domain
CT43_RS02105	PF00501	AMP-binding enzyme
CT43_RS02105	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS02105	PF00550	Phosphopantetheine attachment site
CT43_RS02105	PF00975	Thioesterase domain
CT43_RS02110	PF01910	Thiamine-binding protein
CT43_RS02115	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS02125	PF00005	ABC transporter
CT43_RS02130	PF00005	ABC transporter
CT43_RS02130	PF12848	ABC transporter
CT43_RS02135	PF00041	Fibronectin type III domain
CT43_RS02135	PF00704	Glycosyl hydrolases family 18
CT43_RS02160	PF08360	QacR-like protein, C-terminal region
CT43_RS02160	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS02175	PF11700	Vacuole effluxer Atg22 like
CT43_RS02190	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CT43_RS02190	PF09180	Prolyl-tRNA synthetase, C-terminal
CT43_RS02190	PF03129	Anticodon binding domain
CT43_RS02200	PF00480	ROK family
CT43_RS02205	PF02342	TerD domain
CT43_RS02210	PF02342	TerD domain
CT43_RS02215	PF02342	TerD domain
CT43_RS02220	PF03741	Integral membrane protein TerC family
CT43_RS02225	PF14266	Putative component of 'biosynthetic module'
CT43_RS02230	PF05816	Toxic anion resistance protein (TelA)
CT43_RS02240	PF06569	Protein of unknown function (DUF1128)
CT43_RS02245	PF01451	Low molecular weight phosphotyrosine protein phosphatase
CT43_RS02255	PF03631	Virulence factor BrkB
CT43_RS02265	PF00892	EamA-like transporter family
CT43_RS02275	PF10502	Signal peptidase, peptidase S26 
CT43_RS02285	PF09335	SNARE associated Golgi protein
CT43_RS02300	PF16242	Pyridoxamine 5'-phosphate oxidase like
CT43_RS02305	PF01699	Sodium/calcium exchanger protein
CT43_RS02310	PF14167	YfkD-like protein
CT43_RS02315	PF04055	Radical SAM superfamily
CT43_RS02315	PF08756	YfkB-like domain
CT43_RS02325	PF05681	Fumarate hydratase (Fumerase)
CT43_RS02325	PF05683	Fumarase C-terminus
CT43_RS02330	PF01522	Polysaccharide deacetylase
CT43_RS02335	PF00730	HhH-GPD superfamily base excision DNA repair protein
CT43_RS02340	PF05958	tRNA (Uracil-5-)-methyltransferase
CT43_RS02340	PF01938	TRAM domain
CT43_RS02345	PF01416	tRNA pseudouridine synthase
CT43_RS02355	PF02954	Bacterial regulatory protein, Fis family
CT43_RS02355	PF13426	PAS domain
CT43_RS02355	PF00158	Sigma-54 interaction domain
CT43_RS02365	PF00324	Amino acid permease
CT43_RS02370	PF01546	Peptidase family M20/M25/M40
CT43_RS02370	PF07687	Peptidase dimerisation domain
CT43_RS02390	PF04960	Glutaminase
CT43_RS02395	PF00367	phosphotransferase system, EIIB
CT43_RS02395	PF02378	Phosphotransferase system, EIIC 
CT43_RS02400	PF00144	Beta-lactamase
CT43_RS02415	PF00535	Glycosyl transferase family 2
CT43_RS02420	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
CT43_RS02420	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
CT43_RS02420	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
CT43_RS02425	PF01370	NAD dependent epimerase/dehydratase family
CT43_RS02425	PF00551	Formyl transferase
CT43_RS02425	PF02911	Formyl transferase, C-terminal domain
CT43_RS02430	PF00535	Glycosyl transferase family 2
CT43_RS02435	PF02901	Pyruvate formate lyase-like
CT43_RS02435	PF01228	Glycine radical
CT43_RS02440	PF04055	Radical SAM superfamily
CT43_RS02445	PF06925	Monogalactosyldiacylglycerol (MGDG) synthase
CT43_RS02445	PF04101	Glycosyltransferase family 28 C-terminal domain
CT43_RS02460	PF01979	Amidohydrolase family
CT43_RS02465	PF08338	Domain of unknown function (DUF1731)
CT43_RS02465	PF01370	NAD dependent epimerase/dehydratase family
CT43_RS02470	PF02631	RecX family
CT43_RS02485	PF08176	Small acid-soluble spore protein K family
CT43_RS02490	PF14043	WVELL protein
CT43_RS02495	PF04307	LexA-binding, inner membrane-associated putative hydrolase
CT43_RS02500	PF00730	HhH-GPD superfamily base excision DNA repair protein
CT43_RS02500	PF14815	NUDIX domain
CT43_RS02510	PF04259	Small, acid-soluble spore protein, gamma-type 
CT43_RS02515	PF14182	YgaB-like protein
CT43_RS02520	PF04167	Protein of unknown function (DUF402)
CT43_RS02525	PF00664	ABC transporter transmembrane region
CT43_RS02525	PF00005	ABC transporter
CT43_RS02530	PF06081	Aromatic acid exporter family member 1
CT43_RS02535	PF01645	Conserved region in glutamate synthase
CT43_RS02535	PF04898	Glutamate synthase central domain
CT43_RS02535	PF01493	GXGXG motif
CT43_RS02535	PF00310	Glutamine amidotransferases class-II
CT43_RS02540	PF00202	Aminotransferase class-III
CT43_RS02545	PF00005	ABC transporter
CT43_RS02560	PF07885	Ion channel
CT43_RS02565	PF00578	AhpC/TSA family
CT43_RS02570	PF01475	Ferric uptake regulator family
CT43_RS02580	PF11023	Zinc-ribbon containing domain
CT43_RS02680	PF01709	Transcriptional regulator
CT43_RS02685	PF13344	Haloacid dehalogenase-like hydrolase
CT43_RS02685	PF00293	NUDIX domain
CT43_RS02690	PF00905	Penicillin binding protein transpeptidase domain
CT43_RS02690	PF00912	Transglycosylase
CT43_RS02695	PF13462	Thioredoxin
CT43_RS02705	PF08331	Domain of unknown function (DUF1730)
CT43_RS02710	PF12671	Putative amidase domain
CT43_RS02715	PF00588	SpoU rRNA Methylase family
CT43_RS02720	PF03707	Bacterial signalling protein N terminal repeat
CT43_RS02720	PF00563	EAL domain
CT43_RS02720	PF00990	Diguanylate cyclase, GGDEF domain
CT43_RS02725	PF06798	PrkA serine protein kinase C-terminal domain
CT43_RS02725	PF08298	PrkA AAA domain
CT43_RS02730	PF04285	Protein of unknown function (DUF444)
CT43_RS02745	PF02028	BCCT, betaine/carnitine/choline family transporter
CT43_RS02750	PF08453	Peptidase family M9 N-terminal
CT43_RS02750	PF01752	Collagenase
CT43_RS02750	PF18496	Collagenase G catalytic helper subdomain
CT43_RS02760	PF01145	SPFH domain / Band 7 family
CT43_RS02760	PF15975	Flotillin
CT43_RS02765	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CT43_RS02765	PF00672	HAMP domain
CT43_RS02765	PF02743	Cache domain
CT43_RS02770	PF17203	Single cache domain 3
CT43_RS02770	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS02770	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
CT43_RS02770	PF00989	PAS fold
CT43_RS02775	PF00072	Response regulator receiver domain
CT43_RS02775	PF12431	Transcriptional regulator 
CT43_RS02780	PF03600	Citrate transporter
CT43_RS02805	PF04309	Glycerol-3-phosphate responsive antiterminator
CT43_RS02810	PF17912	MalK OB fold domain
CT43_RS02810	PF00005	ABC transporter
CT43_RS02815	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS02820	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS02825	PF13416	Bacterial extracellular solute-binding protein
CT43_RS02830	PF00149	Calcineurin-like phosphoesterase
CT43_RS02835	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS02835	PF00072	Response regulator receiver domain
CT43_RS02840	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS02840	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS02850	PF13529	Peptidase_C39 like family
CT43_RS02855	PF02743	Cache domain
CT43_RS02855	PF00672	HAMP domain
CT43_RS02855	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CT43_RS02860	PF00989	PAS fold
CT43_RS02860	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS02860	PF17203	Single cache domain 3
CT43_RS02860	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
CT43_RS02865	PF00072	Response regulator receiver domain
CT43_RS02870	PF03390	2-hydroxycarboxylate transporter family
CT43_RS02875	PF00390	Malic enzyme, N-terminal domain
CT43_RS02875	PF03949	Malic enzyme, NAD binding domain
CT43_RS02885	PF00892	EamA-like transporter family
CT43_RS02890	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS02890	PF00155	Aminotransferase class I and II
CT43_RS02900	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS02900	PF00672	HAMP domain
CT43_RS02900	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS02900	PF00989	PAS fold
CT43_RS02900	PF18698	Histidine kinase sensor domain
CT43_RS02905	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS02905	PF00072	Response regulator receiver domain
CT43_RS02915	PF00583	Acetyltransferase (GNAT) family
CT43_RS02915	PF13508	Acetyltransferase (GNAT) domain
CT43_RS02920	PF02634	FdhD/NarQ family
CT43_RS02925	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CT43_RS02925	PF00384	Molybdopterin oxidoreductase
CT43_RS02925	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CT43_RS02925	PF01568	Molydopterin dinucleotide binding domain
CT43_RS02925	PF00037	4Fe-4S binding domain
CT43_RS02930	PF07849	Protein of unknown function (DUF1641)
CT43_RS02940	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
CT43_RS02940	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
CT43_RS02945	PF13520	Amino acid permease
CT43_RS02950	PF01022	Bacterial regulatory protein, arsR family
CT43_RS02955	PF00403	Heavy-metal-associated domain
CT43_RS02960	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
CT43_RS02960	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
CT43_RS02960	PF17956	Nicotinate phosphoribosyltransferase C-terminal domain
CT43_RS02970	PF07504	Fungalysin/Thermolysin Propeptide Motif
CT43_RS02970	PF03413	Peptidase propeptide and YPEB domain
CT43_RS02970	PF01447	Thermolysin metallopeptidase, catalytic domain
CT43_RS02970	PF02868	Thermolysin metallopeptidase, alpha-helical domain
CT43_RS02990	PF04294	VanW like protein
CT43_RS02995	PF03816	Cell envelope-related transcriptional attenuator domain
CT43_RS03000	PF01773	Na+ dependent nucleoside transporter N-terminus
CT43_RS03000	PF07662	Na+ dependent nucleoside transporter C-terminus
CT43_RS03005	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CT43_RS03010	PF00571	CBS domain
CT43_RS03010	PF03471	Transporter associated domain
CT43_RS03010	PF01595	Cyclin M transmembrane N-terminal domain
CT43_RS03015	PF00206	Lyase
CT43_RS03015	PF10415	Fumarase C C-terminus
CT43_RS03020	PF02652	L-lactate permease
CT43_RS03025	PF01022	Bacterial regulatory protein, arsR family
CT43_RS03030	PF08141	Small acid-soluble spore protein H family
CT43_RS03035	PF00854	POT family
CT43_RS03040	PF01497	Periplasmic binding protein
CT43_RS03045	PF01032	FecCD transport family
CT43_RS03050	PF01032	FecCD transport family
CT43_RS03055	PF00005	ABC transporter
CT43_RS03065	PF00155	Aminotransferase class I and II
CT43_RS03070	PF01370	NAD dependent epimerase/dehydratase family
CT43_RS03075	PF13344	Haloacid dehalogenase-like hydrolase
CT43_RS03075	PF00293	NUDIX domain
CT43_RS03080	PF00092	von Willebrand factor type A domain
CT43_RS03085	PF07728	AAA domain (dynein-related subfamily)
CT43_RS03090	PF13091	PLD-like domain
CT43_RS03090	PF13396	Phospholipase_D-nuclease N-terminal
CT43_RS03100	PF00563	EAL domain
CT43_RS03100	PF00990	Diguanylate cyclase, GGDEF domain
CT43_RS03100	PF03707	Bacterial signalling protein N terminal repeat
CT43_RS03105	PF13520	Amino acid permease
CT43_RS03110	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS03110	PF07702	UTRA domain
CT43_RS03115	PF02378	Phosphotransferase system, EIIC 
CT43_RS03115	PF00367	phosphotransferase system, EIIB
CT43_RS03120	PF16657	Maltogenic Amylase, C-terminal domain
CT43_RS03120	PF00128	Alpha amylase, catalytic domain
CT43_RS03135	PF03323	Bacillus/Clostridium GerA spore germination protein
CT43_RS03145	PF01636	Phosphotransferase enzyme family
CT43_RS03150	PF01235	Sodium:alanine symporter family
CT43_RS03155	PF00005	ABC transporter
CT43_RS03160	PF00497	Bacterial extracellular solute-binding proteins, family 3
CT43_RS03165	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS03170	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS03175	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
CT43_RS03185	PF00324	Amino acid permease
CT43_RS03200	PF04542	Sigma-70 region 2 
CT43_RS03200	PF08281	Sigma-70, region 4
CT43_RS03210	PF13280	WYL domain
CT43_RS03210	PF08279	HTH domain
CT43_RS03220	PF00989	PAS fold
CT43_RS03220	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS03220	PF18698	Histidine kinase sensor domain
CT43_RS03220	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS03220	PF00672	HAMP domain
CT43_RS03225	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS03225	PF00072	Response regulator receiver domain
CT43_RS03245	PF00916	Sulfate permease family
CT43_RS03245	PF01740	STAS domain
CT43_RS03250	PF00582	Universal stress protein family
CT43_RS03260	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CT43_RS03265	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS03270	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS03275	PF00005	ABC transporter
CT43_RS03275	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CT43_RS03280	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CT43_RS03280	PF00005	ABC transporter
CT43_RS03285	PF07690	Major Facilitator Superfamily
CT43_RS03290	PF01047	MarR family
CT43_RS03295	PF07690	Major Facilitator Superfamily
CT43_RS03300	PF00356	Bacterial regulatory proteins, lacI family
CT43_RS03305	PF00294	pfkB family carbohydrate kinase
CT43_RS03310	PF05025	RbsD / FucU transport protein family
CT43_RS03315	PF00005	ABC transporter
CT43_RS03320	PF02653	Branched-chain amino acid transport system / permease component
CT43_RS03325	PF13407	Periplasmic binding protein domain
CT43_RS03330	PF00923	Transaldolase/Fructose-6-phosphate aldolase
CT43_RS03335	PF05547	Immune inhibitor A peptidase M6
CT43_RS03345	PF00107	Zinc-binding dehydrogenase
CT43_RS03345	PF08240	Alcohol dehydrogenase GroES-like domain
CT43_RS03355	PF00882	Zinc dependent phospholipase C
CT43_RS03360	PF03372	Endonuclease/Exonuclease/phosphatase family
CT43_RS03365	PF00589	Phage integrase family
CT43_RS03375	PF01381	Helix-turn-helix
CT43_RS03415	PF09588	YqaJ-like viral recombinase domain
CT43_RS03420	PF03837	RecT family
CT43_RS03435	PF01695	IstB-like ATP binding protein
CT43_RS03465	PF04542	Sigma-70 region 2 
CT43_RS03465	PF04545	Sigma-70, region 4
CT43_RS03465	PF00140	Sigma-70 factor, region 1.2
CT43_RS03480	PF02498	BRO family, N-terminal domain
CT43_RS03480	PF10548	P22AR C-terminal domain
CT43_RS03505	PF00239	Resolvase, N terminal domain
CT43_RS03505	PF02796	Helix-turn-helix domain of resolvase
CT43_RS03600	PF01476	LysM domain
CT43_RS03600	PF01510	N-acetylmuramoyl-L-alanine amidase
CT43_RS03600	PF01471	Putative peptidoglycan binding domain
CT43_RS03620	PF01580	FtsK/SpoIIIE family
CT43_RS03620	PF09397	Ftsk gamma domain
CT43_RS03620	PF17854	FtsK alpha domain
CT43_RS03640	PF01565	FAD binding domain 
CT43_RS03640	PF04030	D-arabinono-1,4-lactone oxidase 
CT43_RS03660	PF02673	Bacitracin resistance protein BacA
CT43_RS03665	PF02743	Cache domain
CT43_RS03665	PF00672	HAMP domain
CT43_RS03665	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CT43_RS03670	PF01476	LysM domain
CT43_RS03670	PF06725	3D domain
CT43_RS03675	PF01381	Helix-turn-helix
CT43_RS03685	PF04203	Sortase domain
CT43_RS03700	PF05525	Branched-chain amino acid transport protein
CT43_RS03715	PF00324	Amino acid permease
CT43_RS03720	PF00860	Permease family
CT43_RS03735	PF13673	Acetyltransferase (GNAT) domain
CT43_RS03745	PF00999	Sodium/hydrogen exchanger family
CT43_RS03745	PF02254	TrkA-N domain
CT43_RS03745	PF02080	TrkA-C domain
CT43_RS03750	PF02254	TrkA-N domain
CT43_RS03750	PF02080	TrkA-C domain
CT43_RS03750	PF00999	Sodium/hydrogen exchanger family
CT43_RS03760	PF00510	Cytochrome c oxidase subunit III
CT43_RS03765	PF00115	Cytochrome C and Quinol oxidase polypeptide I
CT43_RS03770	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
CT43_RS03775	PF00324	Amino acid permease
CT43_RS03780	PF13529	Peptidase_C39 like family
CT43_RS03785	PF01546	Peptidase family M20/M25/M40
CT43_RS03785	PF07687	Peptidase dimerisation domain
CT43_RS03790	PF11755	Protein of unknown function (DUF3311)
CT43_RS03795	PF00474	Sodium:solute symporter family
CT43_RS03800	PF03323	Bacillus/Clostridium GerA spore germination protein
CT43_RS03805	PF03845	Spore germination protein
CT43_RS03810	PF05504	Spore germination B3/ GerAC like, C-terminal 
CT43_RS03815	PF17910	FeoB cytosolic helical domain
CT43_RS03815	PF02421	Ferrous iron transport protein B
CT43_RS03815	PF07670	Nucleoside recognition
CT43_RS03815	PF07664	Ferrous iron transport protein B C terminus
CT43_RS03820	PF17910	FeoB cytosolic helical domain
CT43_RS03820	PF07670	Nucleoside recognition
CT43_RS03820	PF07664	Ferrous iron transport protein B C terminus
CT43_RS03820	PF02421	Ferrous iron transport protein B
CT43_RS03825	PF17910	FeoB cytosolic helical domain
CT43_RS03825	PF04023	FeoA domain
CT43_RS03825	PF07664	Ferrous iron transport protein B C terminus
CT43_RS03825	PF02421	Ferrous iron transport protein B
CT43_RS03825	PF07670	Nucleoside recognition
CT43_RS03830	PF12849	PBP superfamily domain
CT43_RS03835	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS03840	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS03850	PF00873	AcrB/AcrD/AcrF family
CT43_RS03965	PF00571	CBS domain
CT43_RS03980	PF08239	Bacterial SH3 domain
CT43_RS03980	PF00246	Zinc carboxypeptidase
CT43_RS03985	PF03070	TENA/THI-4/PQQC family
CT43_RS03990	PF00005	ABC transporter
CT43_RS03995	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS04005	PF02581	Thiamine monophosphate synthase
CT43_RS04010	PF01266	FAD dependent oxidoreductase
CT43_RS04015	PF02597	ThiS family
CT43_RS04020	PF05690	Thiazole biosynthesis protein ThiG
CT43_RS04025	PF00899	ThiF family
CT43_RS04030	PF08543	Phosphomethylpyrimidine kinase
CT43_RS04055	PF03814	Potassium-transporting ATPase A subunit
CT43_RS04065	PF02669	K+-transporting ATPase, c chain
CT43_RS04070	PF02702	Osmosensitive K+ channel His kinase sensor domain
CT43_RS04075	PF07690	Major Facilitator Superfamily
CT43_RS04080	PF01047	MarR family
CT43_RS04095	PF00860	Permease family
CT43_RS04105	PF17969	L,D-transpeptidase C-terminal domain
CT43_RS04105	PF03734	L,D-transpeptidase catalytic domain
CT43_RS04115	PF00294	pfkB family carbohydrate kinase
CT43_RS04120	PF00251	Glycosyl hydrolases family 32 N-terminal domain
CT43_RS04120	PF08244	Glycosyl hydrolases family 32 C terminal
CT43_RS04125	PF00367	phosphotransferase system, EIIB
CT43_RS04125	PF02378	Phosphotransferase system, EIIC 
CT43_RS04130	PF13407	Periplasmic binding protein domain
CT43_RS04130	PF00356	Bacterial regulatory proteins, lacI family
CT43_RS04140	PF00085	Thioredoxin
CT43_RS04145	PF02600	Disulfide bond formation protein DsbB
CT43_RS04150	PF14148	YhdB-like protein
CT43_RS04160	PF03845	Spore germination protein
CT43_RS04175	PF03323	Bacillus/Clostridium GerA spore germination protein
CT43_RS04185	PF00881	Nitroreductase family
CT43_RS04190	PF04293	SpoVR like protein
CT43_RS04195	PF09339	IclR helix-turn-helix domain
CT43_RS04195	PF01614	Bacterial transcriptional regulator
CT43_RS04210	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CT43_RS04210	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CT43_RS04215	PF02583	Metal-sensitive transcriptional repressor
CT43_RS04220	PF00581	Rhodanese-like domain
CT43_RS04220	PF01206	Sulfurtransferase TusA
CT43_RS04225	PF00753	Metallo-beta-lactamase superfamily
CT43_RS04225	PF00581	Rhodanese-like domain
CT43_RS04230	PF01206	Sulfurtransferase TusA
CT43_RS04235	PF00581	Rhodanese-like domain
CT43_RS04245	PF13686	DsrE/DsrF/DrsH-like family
CT43_RS04250	PF01925	Sulfite exporter TauE/SafE
CT43_RS04265	PF08240	Alcohol dehydrogenase GroES-like domain
CT43_RS04265	PF00107	Zinc-binding dehydrogenase
CT43_RS04270	PF02690	Na+/Pi-cotransporter
CT43_RS04275	PF07690	Major Facilitator Superfamily
CT43_RS04285	PF08279	HTH domain
CT43_RS04285	PF05043	Mga helix-turn-helix domain
CT43_RS04285	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CT43_RS04285	PF00874	PRD domain
CT43_RS04290	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
CT43_RS04295	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CT43_RS04300	PF02378	Phosphotransferase system, EIIC 
CT43_RS04315	PF01476	LysM domain
CT43_RS04315	PF06725	3D domain
CT43_RS04320	PF12704	MacB-like periplasmic core domain
CT43_RS04320	PF02687	FtsX-like permease family
CT43_RS04325	PF00005	ABC transporter
CT43_RS04335	PF09529	Integral membrane protein (intg_mem_TP0381)
CT43_RS04350	PF05525	Branched-chain amino acid transport protein
CT43_RS04355	PF05067	Manganese containing catalase
CT43_RS04360	PF12652	CotJB protein
CT43_RS04365	PF11007	Spore coat associated protein JA (CotJA)
CT43_RS04380	PF02735	Ku70/Ku80 beta-barrel domain
CT43_RS04390	PF09335	SNARE associated Golgi protein
CT43_RS04425	PF13520	Amino acid permease
CT43_RS04430	PF00999	Sodium/hydrogen exchanger family
CT43_RS04440	PF01380	SIS domain
CT43_RS04440	PF01418	Helix-turn-helix domain, rpiR family
CT43_RS04445	PF13580	SIS domain
CT43_RS04450	PF00367	phosphotransferase system, EIIB
CT43_RS04450	PF02378	Phosphotransferase system, EIIC 
CT43_RS04460	PF07681	DoxX
CT43_RS04475	PF00892	EamA-like transporter family
CT43_RS04480	PF01037	Lrp/AsnC ligand binding domain
CT43_RS04485	PF00206	Lyase
CT43_RS04485	PF00583	Acetyltransferase (GNAT) family
CT43_RS04485	PF14698	Argininosuccinate lyase C-terminal
CT43_RS04490	PF00106	short chain dehydrogenase
CT43_RS04495	PF13411	MerR HTH family regulatory protein
CT43_RS04510	PF17934	Tetracyclin repressor-like, C-terminal domain
CT43_RS04510	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS04515	PF07690	Major Facilitator Superfamily
CT43_RS04520	PF01638	HxlR-like helix-turn-helix
CT43_RS04530	PF02525	Flavodoxin-like fold
CT43_RS04535	PF12793	Sugar transport-related sRNA regulator N-term
CT43_RS04535	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CT43_RS04540	PF07690	Major Facilitator Superfamily
CT43_RS04550	PF01965	DJ-1/PfpI family
CT43_RS04555	PF18011	C-terminal domain found in long catalases
CT43_RS04555	PF06628	Catalase-related immune-responsive
CT43_RS04555	PF00199	Catalase
CT43_RS04565	PF13520	Amino acid permease
CT43_RS04570	PF01177	Asp/Glu/Hydantoin racemase
CT43_RS04580	PF00171	Aldehyde dehydrogenase family
CT43_RS04585	PF00005	ABC transporter
CT43_RS04585	PF00664	ABC transporter transmembrane region
CT43_RS04590	PF00005	ABC transporter
CT43_RS04590	PF00664	ABC transporter transmembrane region
CT43_RS04595	PF00497	Bacterial extracellular solute-binding proteins, family 3
CT43_RS04600	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS04605	PF00005	ABC transporter
CT43_RS04610	PF00269	Small, acid-soluble spore proteins, alpha/beta type
CT43_RS04620	PF14398	YheC/D like ATP-grasp
CT43_RS04630	PF04286	Protein of unknown function (DUF445)
CT43_RS04635	PF06133	Control of competence regulator ComK, YlbF/YmcA
CT43_RS04655	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CT43_RS04655	PF00205	Thiamine pyrophosphate enzyme, central domain
CT43_RS04655	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CT43_RS04660	PF03306	Alpha-acetolactate decarboxylase
CT43_RS04670	PF02245	Methylpurine-DNA glycosylase (MPG)
CT43_RS04680	PF17210	SdrD B-like domain
CT43_RS04680	PF00746	LPXTG cell wall anchor motif
CT43_RS04680	PF17961	Bacterial Ig domain
CT43_RS04680	PF04650	YSIRK type signal peptide
CT43_RS04680	PF10425	C-terminus of bacterial fibrinogen-binding adhesin
CT43_RS04690	PF04055	Radical SAM superfamily
CT43_RS04695	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS04695	PF00501	AMP-binding enzyme
CT43_RS04710	PF00916	Sulfate permease family
CT43_RS04710	PF01740	STAS domain
CT43_RS04715	PF01943	Polysaccharide biosynthesis protein
CT43_RS04715	PF14667	Polysaccharide biosynthesis C-terminal domain
CT43_RS04735	PF00378	Enoyl-CoA hydratase/isomerase
CT43_RS04755	PF05343	M42 glutamyl aminopeptidase
CT43_RS04760	PF00395	S-layer homology domain
CT43_RS04760	PF01520	N-acetylmuramoyl-L-alanine amidase
CT43_RS04770	PF11121	Protein of unknown function (DUF2639)
CT43_RS04775	PF05544	Proline racemase
CT43_RS04780	PF02423	Ornithine cyclodeaminase/mu-crystallin family
CT43_RS04790	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CT43_RS04795	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS04800	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS04800	PF12911	N-terminal TM domain of oligopeptide transport permease C
CT43_RS04805	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CT43_RS04805	PF00005	ABC transporter
CT43_RS04835	PF16123	Hydroxyacylglutathione hydrolase C-terminus
CT43_RS04835	PF00753	Metallo-beta-lactamase superfamily
CT43_RS04850	PF00083	Sugar (and other) transporter
CT43_RS04855	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS04855	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
CT43_RS04860	PF00072	Response regulator receiver domain
CT43_RS04860	PF12431	Transcriptional regulator 
CT43_RS04860	PF08279	HTH domain
CT43_RS04865	PF03401	Tripartite tricarboxylate transporter family receptor
CT43_RS04870	PF00293	NUDIX domain
CT43_RS04875	PF08463	EcoEI R protein C-terminal
CT43_RS04875	PF00271	Helicase conserved C-terminal domain
CT43_RS04875	PF13588	Type I restriction enzyme R protein N terminus (HSDR_N)
CT43_RS04875	PF04851	Type III restriction enzyme, res subunit
CT43_RS04885	PF03796	DnaB-like helicase C terminal domain
CT43_RS04885	PF00772	DnaB-like helicase N terminal domain
CT43_RS04900	PF01925	Sulfite exporter TauE/SafE
CT43_RS04915	PF07690	Major Facilitator Superfamily
CT43_RS04940	PF13026	Protein of unknown function (DUF3887)
CT43_RS04940	PF12146	Serine aminopeptidase, S33
CT43_RS04980	PF01066	CDP-alcohol phosphatidyltransferase
CT43_RS04990	PF07690	Major Facilitator Superfamily
CT43_RS05005	PF02733	Dak1 domain
CT43_RS05045	PF01695	IstB-like ATP binding protein
CT43_RS05050	PF00665	Integrase core domain
CT43_RS05060	PF18801	response regulator aspartate phosphatase H, N terminal
CT43_RS05065	PF00395	S-layer homology domain
CT43_RS05095	PF12697	Alpha/beta hydrolase family
CT43_RS05120	PF05532	CsbD-like
CT43_RS05135	PF01740	STAS domain
CT43_RS05140	PF13581	Histidine kinase-like ATPase domain
CT43_RS05145	PF04539	Sigma-70 region 3
CT43_RS05145	PF04542	Sigma-70 region 2 
CT43_RS05145	PF04545	Sigma-70, region 4
CT43_RS05155	PF07228	Stage II sporulation protein E (SpoIIE)
CT43_RS05155	PF13426	PAS domain
CT43_RS05160	PF03705	CheR methyltransferase, all-alpha domain
CT43_RS05160	PF01739	CheR methyltransferase, SAM binding domain
CT43_RS05165	PF00072	Response regulator receiver domain
CT43_RS05165	PF01627	Hpt domain
CT43_RS05165	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS05165	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS05185	PF01906	Putative heavy-metal-binding
CT43_RS05195	PF13333	Integrase core domain
CT43_RS05195	PF13276	HTH-like domain
CT43_RS05195	PF00665	Integrase core domain
CT43_RS05205	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
CT43_RS05210	PF08240	Alcohol dehydrogenase GroES-like domain
CT43_RS05210	PF00107	Zinc-binding dehydrogenase
CT43_RS05215	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
CT43_RS05220	PF11121	Protein of unknown function (DUF2639)
CT43_RS05235	PF00149	Calcineurin-like phosphoesterase
CT43_RS05240	PF13514	AAA domain
CT43_RS05245	PF01336	OB-fold nucleic acid binding domain
CT43_RS05245	PF01966	HD domain
CT43_RS05255	PF01810	LysE type translocator
CT43_RS05260	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CT43_RS05265	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CT43_RS05275	PF17874	MalT-like TPR region
CT43_RS05275	PF18801	response regulator aspartate phosphatase H, N terminal
CT43_RS05285	PF08386	TAP-like protein
CT43_RS05285	PF00561	alpha/beta hydrolase fold
CT43_RS05290	PF14147	Sporulation protein YhaL
CT43_RS05310	PF00190	Cupin
CT43_RS05315	PF01381	Helix-turn-helix
CT43_RS05320	PF04309	Glycerol-3-phosphate responsive antiterminator
CT43_RS05325	PF00230	Major intrinsic protein
CT43_RS05330	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CT43_RS05330	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CT43_RS05335	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
CT43_RS05335	PF01266	FAD dependent oxidoreductase
CT43_RS05340	PF03551	Transcriptional regulator PadR-like family
CT43_RS05350	PF08281	Sigma-70, region 4
CT43_RS05350	PF04542	Sigma-70 region 2 
CT43_RS05365	PF13538	UvrD-like helicase C-terminal domain
CT43_RS05390	PF01047	MarR family
CT43_RS05395	PF12732	YtxH-like protein
CT43_RS05400	PF01230	HIT domain
CT43_RS05405	PF00005	ABC transporter
CT43_RS05415	PF12787	EcsC protein family
CT43_RS05455	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS05455	PF17934	Tetracyclin repressor-like, C-terminal domain
CT43_RS05465	PF03703	Bacterial PH domain
CT43_RS05470	PF03703	Bacterial PH domain
CT43_RS05505	PF10014	2OG-Fe dioxygenase
CT43_RS05515	PF00892	EamA-like transporter family
CT43_RS05520	PF03703	Bacterial PH domain
CT43_RS05525	PF03703	Bacterial PH domain
CT43_RS05530	PF03992	Antibiotic biosynthesis monooxygenase
CT43_RS05535	PF00912	Transglycosylase
CT43_RS05535	PF00905	Penicillin binding protein transpeptidase domain
CT43_RS05540	PF01208	Uroporphyrinogen decarboxylase (URO-D)
CT43_RS05545	PF00762	Ferrochelatase
CT43_RS05550	PF01593	Flavin containing amine oxidoreductase
CT43_RS05575	PF03965	Penicillinase repressor
CT43_RS05585	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS05585	PF17932	Tetracyclin repressor-like, C-terminal domain
CT43_RS05610	PF13302	Acetyltransferase (GNAT) domain
CT43_RS05615	PF00356	Bacterial regulatory proteins, lacI family
CT43_RS05620	PF14149	YhfH-like protein
CT43_RS05625	PF12706	Beta-lactamase superfamily domain
CT43_RS05640	PF00501	AMP-binding enzyme
CT43_RS05640	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS05645	PF00395	S-layer homology domain
CT43_RS05645	PF01520	N-acetylmuramoyl-L-alanine amidase
CT43_RS05655	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS05660	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS05665	PF00005	ABC transporter
CT43_RS05665	PF17850	CysA C-terminal regulatory domain
CT43_RS05665	PF12857	TOBE-like domain
CT43_RS05670	PF07968	Leukocidin/Hemolysin toxin family
CT43_RS05675	PF00149	Calcineurin-like phosphoesterase
CT43_RS05680	PF01966	HD domain
CT43_RS05690	PF08281	Sigma-70, region 4
CT43_RS05690	PF04542	Sigma-70 region 2 
CT43_RS05695	PF06445	GyrI-like small molecule binding domain
CT43_RS05695	PF12833	Helix-turn-helix domain
CT43_RS05700	PF02371	Transposase IS116/IS110/IS902 family
CT43_RS05700	PF01548	Transposase
CT43_RS05705	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS05705	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS05710	PF00072	Response regulator receiver domain
CT43_RS05710	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS05730	PF01435	Peptidase family M48
CT43_RS05730	PF16491	CAAX prenyl protease N-terminal, five membrane helices
CT43_RS05735	PF00672	HAMP domain
CT43_RS05735	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CT43_RS05735	PF02743	Cache domain
CT43_RS05740	PF02018	Carbohydrate binding domain
CT43_RS05740	PF06452	Carbohydrate family 9 binding domain-like
CT43_RS05740	PF00331	Glycosyl hydrolase family 10
CT43_RS05740	PF00395	S-layer homology domain
CT43_RS05750	PF01274	Malate synthase
CT43_RS05755	PF00463	Isocitrate lyase family
CT43_RS05770	PF00313	'Cold-shock' DNA-binding domain
CT43_RS05790	PF09335	SNARE associated Golgi protein
CT43_RS05795	PF10502	Signal peptidase, peptidase S26 
CT43_RS05800	PF13361	UvrD-like helicase C-terminal domain
CT43_RS05800	PF12705	PD-(D/E)XK nuclease superfamily
CT43_RS05805	PF12705	PD-(D/E)XK nuclease superfamily
CT43_RS05805	PF00580	UvrD/REP helicase N-terminal domain
CT43_RS05805	PF13361	UvrD-like helicase C-terminal domain
CT43_RS05810	PF01000	RNA polymerase Rpb3/RpoA insert domain
CT43_RS05810	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
CT43_RS05810	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
CT43_RS05815	PF10676	Spore germination protein gerPA/gerPF
CT43_RS05820	PF10970	Spore germination protein GerPE 
CT43_RS05830	PF10737	Spore germination protein GerPC
CT43_RS05835	PF10803	Spore germination GerPB
CT43_RS05840	PF10676	Spore germination protein gerPA/gerPF
CT43_RS05845	PF09388	Spo0E like sporulation regulatory protein
CT43_RS05850	PF01557	Fumarylacetoacetate (FAA) hydrolase family
CT43_RS05860	PF00202	Aminotransferase class-III
CT43_RS05865	PF07457	Protein of unknown function (DUF1516)
CT43_RS05875	PF00733	Asparagine synthase
CT43_RS05875	PF13537	Glutamine amidotransferase domain
CT43_RS05880	PF00762	Ferrochelatase
CT43_RS05885	PF00199	Catalase
CT43_RS05885	PF06628	Catalase-related immune-responsive
CT43_RS05890	PF00909	Ammonium Transporter Family
CT43_RS05895	PF00128	Alpha amylase, catalytic domain
CT43_RS05905	PF04461	Protein of unknown function (DUF520)
CT43_RS05910	PF17783	CvfB-like winged helix domain
CT43_RS05910	PF13509	S1 domain
CT43_RS05920	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_RS05920	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CT43_RS05925	PF12758	Protein of unknown function (DUF3813)
CT43_RS05940	PF14168	YjzC-like protein
CT43_RS05945	PF02861	Clp amino terminal domain, pathogenicity island component
CT43_RS05945	PF17871	AAA lid domain
CT43_RS05945	PF07724	AAA domain (Cdc48 subfamily)
CT43_RS05945	PF10431	C-terminal, D2-small domain, of ClpB protein 
CT43_RS05945	PF00004	ATPase family associated with various cellular activities (AAA)
CT43_RS05965	PF10815	ComZ
CT43_RS05970	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
CT43_RS05970	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
CT43_RS05975	PF02801	Beta-ketoacyl synthase, C-terminal domain
CT43_RS05975	PF00109	Beta-ketoacyl synthase, N-terminal domain
CT43_RS05980	PF10026	Predicted Zn-dependent protease (DUF2268)
CT43_RS05985	PF12227	Protein of unknown function (DUF3603)
CT43_RS05990	PF00579	tRNA synthetases class I (W and Y)
CT43_RS06000	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CT43_RS06005	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS06010	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS06010	PF12911	N-terminal TM domain of oligopeptide transport permease C
CT43_RS06015	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CT43_RS06015	PF00005	ABC transporter
CT43_RS06020	PF00005	ABC transporter
CT43_RS06020	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CT43_RS06025	PF01554	MatE
CT43_RS06030	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CT43_RS06040	PF03960	ArsC family
CT43_RS06045	PF03741	Integral membrane protein TerC family
CT43_RS06050	PF05389	Negative regulator of genetic competence (MecA)
CT43_RS06055	PF13091	PLD-like domain
CT43_RS06055	PF13396	Phospholipase_D-nuclease N-terminal
CT43_RS06065	PF08439	Oligopeptidase F
CT43_RS06065	PF01432	Peptidase family M3
CT43_RS06075	PF01152	Bacterial-like globin
CT43_RS06080	PF01928	CYTH domain
CT43_RS06090	PF04607	Region found in RelA / SpoT proteins
CT43_RS06095	PF01513	ATP-NAD kinase
CT43_RS06100	PF00849	RNA pseudouridylate synthase
CT43_RS06110	PF00149	Calcineurin-like phosphoesterase
CT43_RS06115	PF01098	Cell cycle protein
CT43_RS06120	PF00535	Glycosyl transferase family 2
CT43_RS06125	PF08241	Methyltransferase domain
CT43_RS06130	PF05711	Macrocin-O-methyltransferase (TylF)
CT43_RS06160	PF00483	Nucleotidyl transferase
CT43_RS06165	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
CT43_RS06170	PF16363	GDP-mannose 4,6 dehydratase
CT43_RS06175	PF04321	RmlD substrate binding domain
CT43_RS06195	PF07098	Protein of unknown function (DUF1360)
CT43_RS06215	PF13361	UvrD-like helicase C-terminal domain
CT43_RS06215	PF00580	UvrD/REP helicase N-terminal domain
CT43_RS06220	PF13673	Acetyltransferase (GNAT) domain
CT43_RS06230	PF00756	Putative esterase
CT43_RS06245	PF02368	Bacterial Ig-like domain (group 2)
CT43_RS06250	PF00474	Sodium:solute symporter family
CT43_RS06255	PF04715	Anthranilate synthase component I, N terminal region
CT43_RS06255	PF00425	chorismate binding enzyme
CT43_RS06260	PF02885	Glycosyl transferase family, helical bundle domain
CT43_RS06260	PF00117	Glutamine amidotransferase class-I
CT43_RS06260	PF00591	Glycosyl transferase family, a/b domain
CT43_RS06265	PF02885	Glycosyl transferase family, helical bundle domain
CT43_RS06265	PF00591	Glycosyl transferase family, a/b domain
CT43_RS06270	PF00218	Indole-3-glycerol phosphate synthase
CT43_RS06275	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
CT43_RS06280	PF00291	Pyridoxal-phosphate dependent enzyme
CT43_RS06285	PF00290	Tryptophan synthase alpha chain
CT43_RS06295	PF02652	L-lactate permease
CT43_RS06300	PF10042	Uncharacterized conserved protein (DUF2278)
CT43_RS06315	PF13240	zinc-ribbon domain
CT43_RS06325	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CT43_RS06325	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CT43_RS06340	PF01209	ubiE/COQ5 methyltransferase family
CT43_RS06345	PF00881	Nitroreductase family
CT43_RS06360	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CT43_RS06360	PF00364	Biotin-requiring enzyme
CT43_RS06360	PF02817	e3 binding domain
CT43_RS06365	PF16870	2-oxoglutarate dehydrogenase C-terminal
CT43_RS06365	PF00676	Dehydrogenase E1 component
CT43_RS06365	PF02779	Transketolase, pyrimidine binding domain
CT43_RS06370	PF01381	Helix-turn-helix
CT43_RS06440	PF07943	Penicillin-binding protein 5, C-terminal domain
CT43_RS06440	PF00768	D-alanyl-D-alanine carboxypeptidase
CT43_RS06450	PF12389	Camelysin metallo-endopeptidase
CT43_RS06460	PF12389	Camelysin metallo-endopeptidase
CT43_RS06465	PF08671	Anti-repressor SinI
CT43_RS06465	PF01381	Helix-turn-helix
CT43_RS06475	PF05547	Immune inhibitor A peptidase M6
CT43_RS06480	PF00171	Aldehyde dehydrogenase family
CT43_RS06485	PF08402	TOBE domain
CT43_RS06485	PF00005	ABC transporter
CT43_RS06490	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS06495	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS06500	PF13416	Bacterial extracellular solute-binding protein
CT43_RS06510	PF03176	MMPL family
CT43_RS06520	PF00849	RNA pseudouridylate synthase
CT43_RS06520	PF01479	S4 domain
CT43_RS06530	PF00188	Cysteine-rich secretory protein family
CT43_RS06535	PF13183	4Fe-4S dicluster domain
CT43_RS06535	PF02754	Cysteine-rich domain
CT43_RS06540	PF02913	FAD linked oxidases, C-terminal domain
CT43_RS06540	PF01565	FAD binding domain 
CT43_RS06545	PF05651	Putative sugar diacid recognition
CT43_RS06545	PF17853	GGDEF-like domain
CT43_RS06545	PF13556	PucR C-terminal helix-turn-helix domain
CT43_RS06555	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS06555	PF00072	Response regulator receiver domain
CT43_RS06565	PF07729	FCD domain
CT43_RS06565	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS06570	PF02754	Cysteine-rich domain
CT43_RS06575	PF11870	Domain of unknown function (DUF3390)
CT43_RS06575	PF13183	4Fe-4S dicluster domain
CT43_RS06575	PF02589	LUD domain
CT43_RS06580	PF02589	LUD domain
CT43_RS06585	PF06750	Bacterial Peptidase A24 N-terminal domain
CT43_RS06585	PF01478	Type IV leader peptidase family
CT43_RS06595	PF01226	Formate/nitrite transporter
CT43_RS06600	PF03741	Integral membrane protein TerC family
CT43_RS06605	PF02386	Cation transport protein
CT43_RS06610	PF00269	Small, acid-soluble spore proteins, alpha/beta type
CT43_RS06615	PF01575	MaoC like domain
CT43_RS06640	PF00561	alpha/beta hydrolase fold
CT43_RS06650	PF02386	Cation transport protein
CT43_RS06670	PF00005	ABC transporter
CT43_RS06670	PF08402	TOBE domain
CT43_RS06675	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS06680	PF13419	Haloacid dehalogenase-like hydrolase
CT43_RS06685	PF00266	Aminotransferase class-V
CT43_RS06695	PF00455	DeoR C terminal sensor domain
CT43_RS06695	PF08220	DeoR-like helix-turn-helix domain
CT43_RS06710	PF00596	Class II Aldolase and Adducin N-terminal domain
CT43_RS06720	PF04748	Divergent polysaccharide deacetylase
CT43_RS06725	PF09388	Spo0E like sporulation regulatory protein
CT43_RS06730	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS06730	PF02743	Cache domain
CT43_RS06730	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS06735	PF01047	MarR family
CT43_RS06745	PF12867	DinB superfamily
CT43_RS06755	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS06755	PF00989	PAS fold
CT43_RS06755	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS06755	PF13426	PAS domain
CT43_RS06755	PF13188	PAS domain
CT43_RS06760	PF06508	Queuosine biosynthesis protein QueC
CT43_RS06765	PF01242	6-pyruvoyl tetrahydropterin synthase
CT43_RS06770	PF04055	Radical SAM superfamily
CT43_RS06775	PF14489	QueF-like protein
CT43_RS06780	PF09953	Uncharacterized protein conserved in bacteria (DUF2187)
CT43_RS06810	PF07972	NrdI Flavodoxin like 
CT43_RS06815	PF08343	Ribonucleotide reductase N-terminal
CT43_RS06815	PF00317	Ribonucleotide reductase, all-alpha domain
CT43_RS06815	PF02867	Ribonucleotide reductase, barrel domain
CT43_RS06820	PF00268	Ribonucleotide reductase, small chain
CT43_RS06825	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS06830	PF00005	ABC transporter
CT43_RS06840	PF00005	ABC transporter
CT43_RS06860	PF01037	Lrp/AsnC ligand binding domain
CT43_RS06870	PF00857	Isochorismatase family
CT43_RS06880	PF02016	LD-carboxypeptidase N-terminal domain
CT43_RS06880	PF17676	LD-carboxypeptidase C-terminal domain
CT43_RS06885	PF03060	Nitronate monooxygenase
CT43_RS06890	PF04914	DltD protein
CT43_RS06895	PF00550	Phosphopantetheine attachment site
CT43_RS06900	PF03062	MBOAT, membrane-bound O-acyltransferase family
CT43_RS06905	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS06905	PF00501	AMP-binding enzyme
CT43_RS06915	PF01546	Peptidase family M20/M25/M40
CT43_RS06915	PF07687	Peptidase dimerisation domain
CT43_RS06925	PF00258	Flavodoxin
CT43_RS06940	PF01636	Phosphotransferase enzyme family
CT43_RS06960	PF01554	MatE
CT43_RS06965	PF02673	Bacitracin resistance protein BacA
CT43_RS06980	PF01047	MarR family
CT43_RS06990	PF00375	Sodium:dicarboxylate symporter family
CT43_RS07005	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
CT43_RS07015	PF03698	Uncharacterised protein family (UPF0180)
CT43_RS07025	PF01063	Amino-transferase class IV
CT43_RS07030	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CT43_RS07030	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CT43_RS07030	PF00205	Thiamine pyrophosphate enzyme, central domain
CT43_RS07035	PF10369	Small subunit of acetolactate synthase
CT43_RS07035	PF01842	ACT domain
CT43_RS07040	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
CT43_RS07040	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
CT43_RS07045	PF00682	HMGL-like
CT43_RS07045	PF08502	LeuA allosteric (dimerisation) domain
CT43_RS07050	PF00180	Isocitrate/isopropylmalate dehydrogenase
CT43_RS07055	PF00330	Aconitase family (aconitate hydratase)
CT43_RS07060	PF00694	Aconitase C-terminal domain
CT43_RS07065	PF13393	Histidyl-tRNA synthetase
CT43_RS07070	PF01634	ATP phosphoribosyltransferase
CT43_RS07075	PF00815	Histidinol dehydrogenase
CT43_RS07080	PF00475	Imidazoleglycerol-phosphate dehydratase
CT43_RS07085	PF00117	Glutamine amidotransferase class-I
CT43_RS07090	PF00977	Histidine biosynthesis protein
CT43_RS07095	PF00977	Histidine biosynthesis protein
CT43_RS07100	PF01502	Phosphoribosyl-AMP cyclohydrolase
CT43_RS07105	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
CT43_RS07110	PF02811	PHP domain
CT43_RS07120	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CT43_RS07120	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CT43_RS07125	PF01066	CDP-alcohol phosphatidyltransferase
CT43_RS07130	PF00884	Sulfatase
CT43_RS07140	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
CT43_RS07140	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
CT43_RS07150	PF01507	Phosphoadenosine phosphosulfate reductase family
CT43_RS07155	PF14306	PUA-like domain
CT43_RS07155	PF01747	ATP-sulfurylase
CT43_RS07165	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
CT43_RS07165	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
CT43_RS07175	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CT43_RS07180	PF01903	CbiX
CT43_RS07190	PF00209	Sodium:neurotransmitter symporter family
CT43_RS07200	PF00375	Sodium:dicarboxylate symporter family
CT43_RS07210	PF03553	Na+/H+ antiporter family
CT43_RS07230	PF07730	Histidine kinase
CT43_RS07230	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS07230	PF00672	HAMP domain
CT43_RS07235	PF00072	Response regulator receiver domain
CT43_RS07235	PF00196	Bacterial regulatory proteins, luxR family
CT43_RS07245	PF05525	Branched-chain amino acid transport protein
CT43_RS07255	PF01209	ubiE/COQ5 methyltransferase family
CT43_RS07280	PF00175	Oxidoreductase NAD-binding domain 
CT43_RS07280	PF00970	Oxidoreductase FAD-binding domain
CT43_RS07280	PF00042	Globin
CT43_RS07295	PF01925	Sulfite exporter TauE/SafE
CT43_RS07300	PF01384	Phosphate transporter family
CT43_RS07305	PF01865	Protein of unknown function DUF47
CT43_RS07310	PF00905	Penicillin binding protein transpeptidase domain
CT43_RS07310	PF00912	Transglycosylase
CT43_RS07325	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS07325	PF00989	PAS fold
CT43_RS07325	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS07330	PF01904	Protein of unknown function DUF72
CT43_RS07340	PF00589	Phage integrase family
CT43_RS07345	PF16736	Single Cache-like 
CT43_RS07345	PF00989	PAS fold
CT43_RS07345	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS07345	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS07350	PF01048	Phosphorylase superfamily
CT43_RS07360	PF09924	Uncharacterised conserved protein (DUF2156)
CT43_RS07360	PF03706	Lysylphosphatidylglycerol synthase TM region
CT43_RS07375	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
CT43_RS07375	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
CT43_RS07380	PF07943	Penicillin-binding protein 5, C-terminal domain
CT43_RS07380	PF00768	D-alanyl-D-alanine carboxypeptidase
CT43_RS07385	PF07670	Nucleoside recognition
CT43_RS07390	PF07670	Nucleoside recognition
CT43_RS07395	PF00849	RNA pseudouridylate synthase
CT43_RS07395	PF01479	S4 domain
CT43_RS07400	PF00578	AhpC/TSA family
CT43_RS07405	PF05140	ResB-like family 
CT43_RS07410	PF01578	Cytochrome C assembly protein
CT43_RS07415	PF00072	Response regulator receiver domain
CT43_RS07415	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS07420	PF00989	PAS fold
CT43_RS07420	PF00672	HAMP domain
CT43_RS07420	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS07420	PF18698	Histidine kinase sensor domain
CT43_RS07420	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS07425	PF01923	Cobalamin adenosyltransferase
CT43_RS07440	PF12822	ECF transporter, substrate-specific component
CT43_RS07455	PF00271	Helicase conserved C-terminal domain
CT43_RS07455	PF00270	DEAD/DEAH box helicase
CT43_RS07460	PF02517	CPBP intramembrane metalloprotease
CT43_RS07470	PF00149	Calcineurin-like phosphoesterase
CT43_RS07475	PF13411	MerR HTH family regulatory protein
CT43_RS07480	PF05389	Negative regulator of genetic competence (MecA)
CT43_RS07485	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CT43_RS07485	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
CT43_RS07510	PF17763	Glutaminase/Asparaginase C-terminal domain
CT43_RS07510	PF00710	Asparaginase, N-terminal
CT43_RS07515	PF02224	Cytidylate kinase
CT43_RS07520	PF00575	S1 RNA binding domain
CT43_RS07525	PF01070	FMN-dependent dehydrogenase
CT43_RS07530	PF14140	YpzI-like protein
CT43_RS07540	PF14045	YIEGIA protein
CT43_RS07550	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
CT43_RS07550	PF01926	50S ribosome-binding GTPase
CT43_RS07555	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
CT43_RS07555	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
CT43_RS07565	PF10966	Protein of unknown function (DUF2768)
CT43_RS07575	PF09547	Stage IV sporulation protein A (spore_IV_A)
CT43_RS07580	PF00216	Bacterial DNA-binding protein
CT43_RS07585	PF01227	GTP cyclohydrolase I
CT43_RS07590	PF07307	Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
CT43_RS07595	PF01209	ubiE/COQ5 methyltransferase family
CT43_RS07600	PF00348	Polyprenyl synthetase
CT43_RS07605	PF00334	Nucleoside diphosphate kinase
CT43_RS07610	PF01264	Chorismate synthase
CT43_RS07615	PF01761	3-dehydroquinate synthase
CT43_RS07620	PF00155	Aminotransferase class I and II
CT43_RS07630	PF08858	IDEAL domain
CT43_RS07630	PF08864	UPF0302 domain
CT43_RS07635	PF10673	Protein of unknown function (DUF2487)
CT43_RS07640	PF00355	Rieske [2Fe-2S] domain
CT43_RS07645	PF00033	Cytochrome b/b6/petB
CT43_RS07650	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
CT43_RS07650	PF00032	Cytochrome b(C-terminal)/b6/petD
CT43_RS07655	PF07187	Protein of unknown function (DUF1405)
CT43_RS07665	PF09577	Sporulation protein YpjB (SpoYpjB)
CT43_RS07670	PF04298	Putative neutral zinc metallopeptidase
CT43_RS07680	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_RS07680	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CT43_RS07685	PF03819	MazG nucleotide pyrophosphohydrolase domain
CT43_RS07690	PF01113	Dihydrodipicolinate reductase, N-terminus
CT43_RS07690	PF05173	Dihydrodipicolinate reductase, C-terminus
CT43_RS07695	PF02142	MGS-like domain
CT43_RS07700	PF02585	GlcNAc-PI de-N-acetylase
CT43_RS07705	PF00534	Glycosyl transferases group 1
CT43_RS07705	PF13439	Glycosyltransferase Family 4
CT43_RS07710	PF12627	Probable RNA and SrmB- binding site of polymerase A
CT43_RS07710	PF13735	tRNA nucleotidyltransferase domain 2 putative
CT43_RS07710	PF01743	Poly A polymerase head domain
CT43_RS07715	PF08279	HTH domain
CT43_RS07715	PF03099	Biotin/lipoate A/B protein ligase family
CT43_RS07715	PF02237	Biotin protein ligase C terminal domain
CT43_RS07725	PF02548	Ketopantoate hydroxymethyltransferase
CT43_RS07730	PF02569	Pantoate-beta-alanine ligase
CT43_RS07735	PF02261	Aspartate decarboxylase
CT43_RS07740	PF00929	Exonuclease
CT43_RS07740	PF13307	Helicase C-terminal domain
CT43_RS07740	PF04851	Type III restriction enzyme, res subunit
CT43_RS07745	PF14084	Protein of unknown function (DUF4264)
CT43_RS07755	PF00155	Aminotransferase class I and II
CT43_RS07760	PF07261	Replication initiation and membrane attachment
CT43_RS07765	PF00730	HhH-GPD superfamily base excision DNA repair protein
CT43_RS07765	PF10576	Iron-sulfur binding domain of endonuclease III
CT43_RS07765	PF00633	Helix-hairpin-helix motif
CT43_RS07775	PF00912	Transglycosylase
CT43_RS07775	PF00905	Penicillin binding protein transpeptidase domain
CT43_RS07780	PF03838	Recombination protein U
CT43_RS07785	PF10720	Protein of unknown function (DUF2515)
CT43_RS07815	PF06908	YspA SLOG family
CT43_RS07820	PF05103	DivIVA protein
CT43_RS07825	PF02926	THUMP domain
CT43_RS07825	PF01170	Putative RNA methylase family UPF0020
CT43_RS07840	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
CT43_RS07850	PF00557	Metallopeptidase family M24
CT43_RS07855	PF00156	Phosphoribosyl transferase domain
CT43_RS07860	PF00860	Permease family
CT43_RS07865	PF04235	Protein of unknown function (DUF418)
CT43_RS07870	PF00350	Dynamin family
CT43_RS07880	PF00583	Acetyltransferase (GNAT) family
CT43_RS07885	PF10752	Protein of unknown function (DUF2533) 
CT43_RS07890	PF00581	Rhodanese-like domain
CT43_RS07915	PF00690	Cation transporter/ATPase, N-terminus
CT43_RS07915	PF00689	Cation transporting ATPase, C-terminus
CT43_RS07920	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
CT43_RS07920	PF01367	5'-3' exonuclease, C-terminal SAM fold
CT43_RS07935	PF13807	G-rich domain on putative tyrosine kinase
CT43_RS07935	PF02706	Chain length determinant protein
CT43_RS07945	PF02397	Bacterial sugar transferase
CT43_RS07960	PF00535	Glycosyl transferase family 2
CT43_RS07965	PF13439	Glycosyltransferase Family 4
CT43_RS07965	PF00534	Glycosyl transferases group 1
CT43_RS07980	PF18014	Acetyltransferase (GNAT) domain
CT43_RS07980	PF13673	Acetyltransferase (GNAT) domain
CT43_RS08000	PF13456	Reverse transcriptase-like
CT43_RS08005	PF01263	Aldose 1-epimerase
CT43_RS08030	PF00313	'Cold-shock' DNA-binding domain
CT43_RS08035	PF08892	YqcI/YcgG family
CT43_RS08040	PF01810	LysE type translocator
CT43_RS08060	PF00474	Sodium:solute symporter family
CT43_RS08065	PF00202	Aminotransferase class-III
CT43_RS08075	PF00999	Sodium/hydrogen exchanger family
CT43_RS08080	PF06445	GyrI-like small molecule binding domain
CT43_RS08080	PF13411	MerR HTH family regulatory protein
CT43_RS08090	PF04239	Protein of unknown function (DUF421)
CT43_RS08095	PF02698	DUF218 domain
CT43_RS08105	PF00881	Nitroreductase family
CT43_RS08155	PF17209	Hfq protein
CT43_RS08165	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
CT43_RS08165	PF04509	CheC-like family
CT43_RS08180	PF03705	CheR methyltransferase, all-alpha domain
CT43_RS08180	PF01739	CheR methyltransferase, SAM binding domain
CT43_RS08200	PF00460	Flagella basal body rod protein
CT43_RS08200	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CT43_RS08205	PF00669	Bacterial flagellin N-terminal helical region
CT43_RS08205	PF00700	Bacterial flagellin C-terminal helical region
CT43_RS08225	PF00460	Flagella basal body rod protein
CT43_RS08230	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CT43_RS08230	PF00460	Flagella basal body rod protein
CT43_RS08235	PF02049	Flagellar hook-basal body complex protein FliE
CT43_RS08240	PF01514	Secretory protein of YscJ/FliF family
CT43_RS08240	PF08345	Flagellar M-ring protein C-terminal
CT43_RS08245	PF01706	FliG C-terminal domain
CT43_RS08245	PF14842	FliG N-terminal domain
CT43_RS08245	PF14841	FliG middle domain
CT43_RS08255	PF18269	T3SS EscN ATPase C-terminal domain
CT43_RS08255	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CT43_RS08255	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CT43_RS08275	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CT43_RS08275	PF07559	Flagellar basal body protein FlaE
CT43_RS08275	PF00460	Flagella basal body rod protein
CT43_RS08290	PF00072	Response regulator receiver domain
CT43_RS08290	PF01584	CheW-like domain
CT43_RS08295	PF12181	DNA binding domain of the motility gene repressor (MogR)
CT43_RS08300	PF00700	Bacterial flagellin C-terminal helical region
CT43_RS08300	PF00669	Bacterial flagellin N-terminal helical region
CT43_RS08305	PF00700	Bacterial flagellin C-terminal helical region
CT43_RS08305	PF00669	Bacterial flagellin N-terminal helical region
CT43_RS08310	PF01464	Transglycosylase SLT domain
CT43_RS08320	PF02154	Flagellar motor switch protein FliM
CT43_RS08320	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
CT43_RS08325	PF04509	CheC-like family
CT43_RS08325	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
CT43_RS08335	PF00813	FliP family
CT43_RS08340	PF01313	Bacterial export proteins, family 3
CT43_RS08350	PF01312	FlhB HrpN YscU SpaS Family
CT43_RS08355	PF00771	FHIPEP family
CT43_RS08360	PF00448	SRP54-type protein, GTPase domain
CT43_RS08365	PF00460	Flagella basal body rod protein
CT43_RS08365	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CT43_RS08370	PF00296	Luciferase-like monooxygenase
CT43_RS08375	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CT43_RS08375	PF01411	tRNA synthetases class II (A)
CT43_RS08375	PF02272	DHHA1 domain
CT43_RS08405	PF03992	Antibiotic biosynthesis monooxygenase
CT43_RS08410	PF00535	Glycosyl transferase family 2
CT43_RS08410	PF07238	PilZ domain
CT43_RS08415	PF08141	Small acid-soluble spore protein H family
CT43_RS08435	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CT43_RS08435	PF03466	LysR substrate binding domain
CT43_RS08440	PF00005	ABC transporter
CT43_RS08440	PF08402	TOBE domain
CT43_RS08450	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS08465	PF00144	Beta-lactamase
CT43_RS08470	PF10787	Uncharacterised protein from bacillus cereus group
CT43_RS08485	PF13021	Domain of unknown function (DUF3885)
CT43_RS08490	PF00300	Histidine phosphatase superfamily (branch 1)
CT43_RS08500	PF00561	alpha/beta hydrolase fold
CT43_RS08510	PF01047	MarR family
CT43_RS08520	PF00733	Asparagine synthase
CT43_RS08520	PF13537	Glutamine amidotransferase domain
CT43_RS08540	PF16916	Dimerisation domain of Zinc Transporter
CT43_RS08540	PF01545	Cation efflux family
CT43_RS08550	PF07729	FCD domain
CT43_RS08550	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS08555	PF00892	EamA-like transporter family
CT43_RS08565	PF02492	CobW/HypB/UreG, nucleotide-binding domain
CT43_RS08565	PF07683	Cobalamin synthesis protein cobW C-terminal domain
CT43_RS08570	PF03773	Predicted permease
CT43_RS08585	PF03553	Na+/H+ antiporter family
CT43_RS08590	PF13411	MerR HTH family regulatory protein
CT43_RS08600	PF00206	Lyase
CT43_RS08600	PF10415	Fumarase C C-terminus
CT43_RS08615	PF01554	MatE
CT43_RS08620	PF03575	Peptidase family S51
CT43_RS08640	PF02683	Cytochrome C biogenesis protein transmembrane region
CT43_RS08645	PF00578	AhpC/TSA family
CT43_RS08655	PF18801	response regulator aspartate phosphatase H, N terminal
CT43_RS08670	PF00291	Pyridoxal-phosphate dependent enzyme
CT43_RS08675	PF04286	Protein of unknown function (DUF445)
CT43_RS08700	PF00196	Bacterial regulatory proteins, luxR family
CT43_RS08700	PF00072	Response regulator receiver domain
CT43_RS08705	PF13185	GAF domain
CT43_RS08705	PF13492	GAF domain
CT43_RS08705	PF07730	Histidine kinase
CT43_RS08705	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS08710	PF00005	ABC transporter
CT43_RS08725	PF13091	PLD-like domain
CT43_RS08730	PF00696	Amino acid kinase family
CT43_RS08735	PF00375	Sodium:dicarboxylate symporter family
CT43_RS08740	PF10415	Fumarase C C-terminus
CT43_RS08740	PF00206	Lyase
CT43_RS08745	PF03949	Malic enzyme, NAD binding domain
CT43_RS08745	PF00390	Malic enzyme, N-terminal domain
CT43_RS08750	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS08755	PF08664	YcbB domain
CT43_RS08755	PF00072	Response regulator receiver domain
CT43_RS08760	PF00271	Helicase conserved C-terminal domain
CT43_RS08760	PF00176	SNF2 family N-terminal domain
CT43_RS08760	PF04434	SWIM zinc finger
CT43_RS08775	PF03590	Aspartate-ammonia ligase
CT43_RS08790	PF00696	Amino acid kinase family
CT43_RS08790	PF13840	ACT domain 
CT43_RS08800	PF13761	Domain of unknown function (DUF4166)
CT43_RS08805	PF14158	YndJ-like protein
CT43_RS08815	PF03976	Polyphosphate kinase 2 (PPK2)
CT43_RS08820	PF03551	Transcriptional regulator PadR-like family
CT43_RS08820	PF10400	Virulence activator alpha C-term
CT43_RS08825	PF07690	Major Facilitator Superfamily
CT43_RS08830	PF07690	Major Facilitator Superfamily
CT43_RS08835	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
CT43_RS08835	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
CT43_RS08845	PF01926	50S ribosome-binding GTPase
CT43_RS08845	PF16360	GTP-binding GTPase Middle Region
CT43_RS08845	PF13167	GTP-binding GTPase N-terminal
CT43_RS08850	PF07690	Major Facilitator Superfamily
CT43_RS08855	PF00291	Pyridoxal-phosphate dependent enzyme
CT43_RS08875	PF00209	Sodium:neurotransmitter symporter family
CT43_RS08880	PF03422	Carbohydrate binding module (family 6)
CT43_RS08880	PF00457	Glycosyl hydrolases family 11
CT43_RS08880	PF01522	Polysaccharide deacetylase
CT43_RS08890	PF04239	Protein of unknown function (DUF421)
CT43_RS08910	PF01625	Peptide methionine sulfoxide reductase
CT43_RS08920	PF01063	Amino-transferase class IV
CT43_RS08925	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CT43_RS08925	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CT43_RS08925	PF00205	Thiamine pyrophosphate enzyme, central domain
CT43_RS08935	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
CT43_RS08935	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
CT43_RS08940	PF00920	Dehydratase family
CT43_RS08945	PF00291	Pyridoxal-phosphate dependent enzyme
CT43_RS08945	PF00585	C-terminal regulatory domain of Threonine dehydratase
CT43_RS08955	PF09587	Bacterial capsule synthesis protein PGA_cap
CT43_RS08970	PF07690	Major Facilitator Superfamily
CT43_RS08975	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
CT43_RS08985	PF04397	LytTr DNA-binding domain
CT43_RS08985	PF00072	Response regulator receiver domain
CT43_RS08990	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
CT43_RS08990	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
CT43_RS09005	PF01979	Amidohydrolase family
CT43_RS09010	PF07690	Major Facilitator Superfamily
CT43_RS09015	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS09020	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CT43_RS09025	PF13302	Acetyltransferase (GNAT) domain
CT43_RS09030	PF00072	Response regulator receiver domain
CT43_RS09030	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS09035	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS09035	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS09050	PF01566	Natural resistance-associated macrophage protein
CT43_RS09055	PF17773	UPF0176 acylphosphatase like domain
CT43_RS09055	PF12368	Rhodanase C-terminal
CT43_RS09055	PF00581	Rhodanese-like domain
CT43_RS09065	PF08546	Ketopantoate reductase PanE/ApbA C terminal
CT43_RS09065	PF02558	Ketopantoate reductase PanE/ApbA
CT43_RS09075	PF13520	Amino acid permease
CT43_RS09085	PF05791	Bacillus haemolytic enterotoxin (HBL)
CT43_RS09090	PF05791	Bacillus haemolytic enterotoxin (HBL)
CT43_RS09095	PF10633	NPCBM-associated, NEW3 domain of alpha-galactosidase
CT43_RS09095	PF00754	F5/8 type C domain
CT43_RS09095	PF13088	BNR repeat-like domain
CT43_RS09100	PF02073	Thermophilic metalloprotease (M29)
CT43_RS09115	PF00583	Acetyltransferase (GNAT) family
CT43_RS09120	PF01906	Putative heavy-metal-binding
CT43_RS09125	PF02517	CPBP intramembrane metalloprotease
CT43_RS09130	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS09135	PF04198	Putative sugar-binding domain
CT43_RS09140	PF01791	DeoC/LacD family aldolase
CT43_RS09145	PF01773	Na+ dependent nucleoside transporter N-terminus
CT43_RS09145	PF07662	Na+ dependent nucleoside transporter C-terminus
CT43_RS09150	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
CT43_RS09150	PF00591	Glycosyl transferase family, a/b domain
CT43_RS09150	PF02885	Glycosyl transferase family, helical bundle domain
CT43_RS09155	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
CT43_RS09160	PF07301	Protein of unknown function (DUF1453)
CT43_RS09165	PF05979	Bacterial protein of unknown function (DUF896)
CT43_RS09180	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CT43_RS09180	PF03466	LysR substrate binding domain
CT43_RS09195	PF00557	Metallopeptidase family M24
CT43_RS09195	PF05195	Aminopeptidase P, N-terminal domain
CT43_RS09205	PF07732	Multicopper oxidase
CT43_RS09205	PF07731	Multicopper oxidase
CT43_RS09205	PF00394	Multicopper oxidase
CT43_RS09215	PF01751	Toprim domain
CT43_RS09215	PF01131	DNA topoisomerase
CT43_RS09215	PF13342	C-terminal repeat of topoisomerase
CT43_RS09215	PF01396	Topoisomerase DNA binding C4 zinc finger
CT43_RS09230	PF02525	Flavodoxin-like fold
CT43_RS09235	PF05525	Branched-chain amino acid transport protein
CT43_RS09245	PF04234	CopC domain
CT43_RS09245	PF13115	YtkA-like
CT43_RS09245	PF05425	Copper resistance protein D
CT43_RS09255	PF00892	EamA-like transporter family
CT43_RS09260	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CT43_RS09260	PF03466	LysR substrate binding domain
CT43_RS09265	PF02082	Transcriptional regulator
CT43_RS09270	PF01323	DSBA-like thioredoxin domain
CT43_RS09275	PF00881	Nitroreductase family
CT43_RS09285	PF01425	Amidase
CT43_RS09290	PF01381	Helix-turn-helix
CT43_RS09310	PF02371	Transposase IS116/IS110/IS902 family
CT43_RS09310	PF01548	Transposase
CT43_RS09380	PF00476	DNA polymerase family A
CT43_RS09380	PF01612	3'-5' exonuclease
CT43_RS09380	PF01367	5'-3' exonuclease, C-terminal SAM fold
CT43_RS09380	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
CT43_RS09465	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
CT43_RS09465	PF18277	AbrB C-terminal domain
CT43_RS09500	PF00239	Resolvase, N terminal domain
CT43_RS09500	PF18010	Cry35Ab1 HTH C-terminal domain
CT43_RS09610	PF05105	Bacteriophage holin family 
CT43_RS09615	PF01510	N-acetylmuramoyl-L-alanine amidase
CT43_RS09615	PF12123	N-acetylmuramoyl-l-alanine amidase
CT43_RS09685	PF01609	Transposase DDE domain
CT43_RS09700	PF01594	AI-2E family transporter
CT43_RS09710	PF01594	AI-2E family transporter
CT43_RS09715	PF00056	lactate/malate dehydrogenase, NAD binding domain
CT43_RS09715	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CT43_RS09720	PF01593	Flavin containing amine oxidoreductase
CT43_RS09725	PF07683	Cobalamin synthesis protein cobW C-terminal domain
CT43_RS09725	PF02492	CobW/HypB/UreG, nucleotide-binding domain
CT43_RS09735	PF12399	Branched-chain amino acid ATP-binding cassette transporter
CT43_RS09735	PF00005	ABC transporter
CT43_RS09740	PF00005	ABC transporter
CT43_RS09745	PF02653	Branched-chain amino acid transport system / permease component
CT43_RS09755	PF03466	LysR substrate binding domain
CT43_RS09755	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CT43_RS09765	PF14552	Tautomerase enzyme
CT43_RS09775	PF01047	MarR family
CT43_RS09785	PF01654	Cytochrome bd terminal oxidase subunit I
CT43_RS09790	PF02322	Cytochrome bd terminal oxidase subunit II
CT43_RS09795	PF00664	ABC transporter transmembrane region
CT43_RS09795	PF00005	ABC transporter
CT43_RS09800	PF00664	ABC transporter transmembrane region
CT43_RS09800	PF00005	ABC transporter
CT43_RS09810	PF00535	Glycosyl transferase family 2
CT43_RS09815	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
CT43_RS09820	PF00132	Bacterial transferase hexapeptide (six repeats)
CT43_RS09845	PF02016	LD-carboxypeptidase N-terminal domain
CT43_RS09845	PF17676	LD-carboxypeptidase C-terminal domain
CT43_RS09850	PF07943	Penicillin-binding protein 5, C-terminal domain
CT43_RS09850	PF00768	D-alanyl-D-alanine carboxypeptidase
CT43_RS09865	PF01476	LysM domain
CT43_RS09865	PF00877	NlpC/P60 family
CT43_RS09875	PF00664	ABC transporter transmembrane region
CT43_RS09875	PF00005	ABC transporter
CT43_RS09880	PF00072	Response regulator receiver domain
CT43_RS09880	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS09885	PF16736	Single Cache-like 
CT43_RS09885	PF00989	PAS fold
CT43_RS09885	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS09885	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS09895	PF00106	short chain dehydrogenase
CT43_RS09900	PF01596	O-methyltransferase
CT43_RS09905	PF04439	Streptomycin adenylyltransferase
CT43_RS09910	PF01522	Polysaccharide deacetylase
CT43_RS09930	PF01842	ACT domain
CT43_RS09930	PF03447	Homoserine dehydrogenase, NAD binding domain
CT43_RS09930	PF00742	Homoserine dehydrogenase
CT43_RS09935	PF00291	Pyridoxal-phosphate dependent enzyme
CT43_RS09940	PF08544	GHMP kinases C terminal 
CT43_RS09940	PF00288	GHMP kinases N terminal domain
CT43_RS09955	PF03816	Cell envelope-related transcriptional attenuator domain
CT43_RS09965	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS09965	PF00072	Response regulator receiver domain
CT43_RS09970	PF16736	Single Cache-like 
CT43_RS09970	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS09970	PF00989	PAS fold
CT43_RS09970	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS09975	PF01522	Polysaccharide deacetylase
CT43_RS09985	PF02308	MgtC family
CT43_RS09990	PF00583	Acetyltransferase (GNAT) family
CT43_RS09995	PF06276	Ferric iron reductase FhuF-like transporter
CT43_RS09995	PF04183	IucA / IucC family
CT43_RS10000	PF04183	IucA / IucC family
CT43_RS10000	PF06276	Ferric iron reductase FhuF-like transporter
CT43_RS10005	PF00501	AMP-binding enzyme
CT43_RS10005	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS10020	PF01261	Xylose isomerase-like TIM barrel
CT43_RS10025	PF00269	Small, acid-soluble spore proteins, alpha/beta type
CT43_RS10030	PF07690	Major Facilitator Superfamily
CT43_RS10035	PF01810	LysE type translocator
CT43_RS10040	PF00155	Aminotransferase class I and II
CT43_RS10040	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS10050	PF01734	Patatin-like phospholipase
CT43_RS10075	PF00293	NUDIX domain
CT43_RS10075	PF13344	Haloacid dehalogenase-like hydrolase
CT43_RS10080	PF02540	NAD synthase
CT43_RS10085	PF02687	FtsX-like permease family
CT43_RS10090	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
CT43_RS10090	PF18277	AbrB C-terminal domain
CT43_RS10095	PF00082	Subtilase family
CT43_RS10100	PF01022	Bacterial regulatory protein, arsR family
CT43_RS10105	PF00248	Aldo/keto reductase family
CT43_RS10110	PF07690	Major Facilitator Superfamily
CT43_RS10130	PF03193	RsgA GTPase
CT43_RS10135	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CT43_RS10135	PF02743	Cache domain
CT43_RS10135	PF00672	HAMP domain
CT43_RS10155	PF00210	Ferritin-like domain
CT43_RS10170	PF00296	Luciferase-like monooxygenase
CT43_RS10180	PF01593	Flavin containing amine oxidoreductase
CT43_RS10185	PF13302	Acetyltransferase (GNAT) domain
CT43_RS10190	PF00248	Aldo/keto reductase family
CT43_RS10195	PF07683	Cobalamin synthesis protein cobW C-terminal domain
CT43_RS10195	PF02492	CobW/HypB/UreG, nucleotide-binding domain
CT43_RS10200	PF00583	Acetyltransferase (GNAT) family
CT43_RS10205	PF01297	Zinc-uptake complex component A periplasmic
CT43_RS10210	PF13460	NAD(P)H-binding 
CT43_RS10215	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
CT43_RS10230	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CT43_RS10235	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CT43_RS10245	PF00300	Histidine phosphatase superfamily (branch 1)
CT43_RS10255	PF08757	CotH kinase protein
CT43_RS10260	PF00293	NUDIX domain
CT43_RS10265	PF09335	SNARE associated Golgi protein
CT43_RS10270	PF14667	Polysaccharide biosynthesis C-terminal domain
CT43_RS10270	PF01943	Polysaccharide biosynthesis protein
CT43_RS10280	PF03773	Predicted permease
CT43_RS10285	PF09323	Domain of unknown function (DUF1980)
CT43_RS10290	PF03061	Thioesterase superfamily
CT43_RS10295	PF13091	PLD-like domain
CT43_RS10295	PF13396	Phospholipase_D-nuclease N-terminal
CT43_RS10310	PF13460	NAD(P)H-binding 
CT43_RS10315	PF04306	Protein of unknown function (DUF456)
CT43_RS10320	PF01595	Cyclin M transmembrane N-terminal domain
CT43_RS10320	PF03471	Transporter associated domain
CT43_RS10320	PF00571	CBS domain
CT43_RS10345	PF05525	Branched-chain amino acid transport protein
CT43_RS10350	PF01588	Putative tRNA binding domain
CT43_RS10365	PF07454	Stage II sporulation protein P (SpoIIP)
CT43_RS10375	PF02557	D-alanyl-D-alanine carboxypeptidase
CT43_RS10385	PF01425	Amidase
CT43_RS10390	PF07690	Major Facilitator Superfamily
CT43_RS10420	PF01047	MarR family
CT43_RS10425	PF07690	Major Facilitator Superfamily
CT43_RS10435	PF00842	Alanine racemase, C-terminal domain
CT43_RS10435	PF01168	Alanine racemase, N-terminal domain
CT43_RS10440	PF13847	Methyltransferase domain
CT43_RS10455	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
CT43_RS10460	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_RS10460	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CT43_RS10465	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS10465	PF00155	Aminotransferase class I and II
CT43_RS10495	PF00583	Acetyltransferase (GNAT) family
CT43_RS10540	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
CT43_RS10565	PF01209	ubiE/COQ5 methyltransferase family
CT43_RS10570	PF01268	Formate--tetrahydrofolate ligase
CT43_RS10580	PF00270	DEAD/DEAH box helicase
CT43_RS10580	PF00271	Helicase conserved C-terminal domain
CT43_RS10585	PF01261	Xylose isomerase-like TIM barrel
CT43_RS10590	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CT43_RS10600	PF00107	Zinc-binding dehydrogenase
CT43_RS10600	PF08240	Alcohol dehydrogenase GroES-like domain
CT43_RS10605	PF04542	Sigma-70 region 2 
CT43_RS10605	PF08281	Sigma-70, region 4
CT43_RS10620	PF00258	Flavodoxin
CT43_RS10620	PF01613	Flavin reductase like domain
CT43_RS10630	PF00255	Glutathione peroxidase
CT43_RS10635	PF13559	Domain of unknown function (DUF4129)
CT43_RS10635	PF11992	Domain of unknown function (DUF3488)
CT43_RS10635	PF01841	Transglutaminase-like superfamily
CT43_RS10640	PF01882	Protein of unknown function DUF58
CT43_RS10645	PF17863	AAA lid domain
CT43_RS10645	PF07726	ATPase family associated with various cellular activities (AAA)
CT43_RS10650	PF14710	Respiratory nitrate reductase alpha N-terminal
CT43_RS10650	PF00384	Molybdopterin oxidoreductase
CT43_RS10650	PF01568	Molydopterin dinucleotide binding domain
CT43_RS10655	PF13247	4Fe-4S dicluster domain
CT43_RS10655	PF14711	Respiratory nitrate reductase beta C-terminal
CT43_RS10660	PF02613	Nitrate reductase delta subunit
CT43_RS10665	PF02665	Nitrate reductase gamma subunit
CT43_RS10670	PF00325	Bacterial regulatory proteins, crp family
CT43_RS10670	PF00027	Cyclic nucleotide-binding domain
CT43_RS10675	PF04055	Radical SAM superfamily
CT43_RS10675	PF06463	Molybdenum Cofactor Synthesis C
CT43_RS10680	PF00899	ThiF family
CT43_RS10685	PF00994	Probable molybdopterin binding domain
CT43_RS10685	PF03453	MoeA N-terminal region (domain I and II)
CT43_RS10685	PF03454	MoeA C-terminal region (domain IV)
CT43_RS10690	PF02391	MoaE protein
CT43_RS10700	PF07690	Major Facilitator Superfamily
CT43_RS10720	PF01903	CbiX
CT43_RS10725	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CT43_RS10730	PF00355	Rieske [2Fe-2S] domain
CT43_RS10735	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
CT43_RS10735	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CT43_RS10735	PF18267	Rubredoxin NAD+ reductase C-terminal domain
CT43_RS10735	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
CT43_RS10735	PF04324	BFD-like [2Fe-2S] binding domain
CT43_RS10740	PF04405	Domain of Unknown function (DUF542)  
CT43_RS10740	PF01814	Hemerythrin HHE cation binding domain
CT43_RS10775	PF04232	Stage V sporulation protein S (SpoVS)
CT43_RS10780	PF18593	CdiI immunity protein
CT43_RS10785	PF04740	LXG domain of WXG superfamily
CT43_RS10785	PF14436	Bacterial EndoU nuclease
CT43_RS10795	PF01966	HD domain
CT43_RS10800	PF00005	ABC transporter
CT43_RS10800	PF16326	ABC transporter C-terminal domain
CT43_RS10800	PF12848	ABC transporter
CT43_RS10815	PF00436	Single-strand binding protein family
CT43_RS10825	PF08712	Scaffold protein Nfu/NifU N terminal
CT43_RS10825	PF13769	Virulence factor
CT43_RS10835	PF06491	Disulphide isomerase
CT43_RS10840	PF04445	Putative SAM-dependent methyltransferase
CT43_RS10845	PF00750	tRNA synthetases class I (R)
CT43_RS10845	PF03485	Arginyl tRNA synthetase N terminal domain
CT43_RS10845	PF05746	DALR anticodon binding domain
CT43_RS10860	PF00133	tRNA synthetases class I (I, L, M and V)
CT43_RS10860	PF08264	Anticodon-binding domain of tRNA
CT43_RS10885	PF02875	Mur ligase family, glutamate ligase domain
CT43_RS10885	PF01225	Mur ligase family, catalytic domain
CT43_RS10885	PF08245	Mur ligase middle domain
CT43_RS10890	PF01336	OB-fold nucleic acid binding domain
CT43_RS10890	PF00152	tRNA synthetases class II (D, K and N) 
CT43_RS10910	PF12538	DNA transporter 
CT43_RS10910	PF01580	FtsK/SpoIIIE family
CT43_RS10985	PF00209	Sodium:neurotransmitter symporter family
CT43_RS11000	PF10997	Alternate to MurJ
CT43_RS11005	PF13419	Haloacid dehalogenase-like hydrolase
CT43_RS11015	PF00465	Iron-containing alcohol dehydrogenase 
CT43_RS11020	PF01177	Asp/Glu/Hydantoin racemase
CT43_RS11025	PF01980	tRNA-methyltransferase O
CT43_RS11030	PF00583	Acetyltransferase (GNAT) family
CT43_RS11035	PF11188	Protein of unknown function (DUF2975)
CT43_RS11040	PF13443	Cro/C1-type HTH DNA-binding domain
CT43_RS11045	PF08645	Polynucleotide kinase 3 phosphatase
CT43_RS11055	PF00005	ABC transporter
CT43_RS11060	PF05975	Bacterial ABC transporter protein EcsB
CT43_RS11065	PF14005	YpjP-like protein
CT43_RS11070	PF13419	Haloacid dehalogenase-like hydrolase
CT43_RS11080	PF00144	Beta-lactamase
CT43_RS11080	PF07930	D-aminopeptidase, domain B
CT43_RS11085	PF00303	Thymidylate synthase
CT43_RS11090	PF00186	Dihydrofolate reductase
CT43_RS11095	PF05223	NTF2-like N-terminal transpeptidase domain
CT43_RS11095	PF03717	Penicillin-binding Protein dimerisation domain
CT43_RS11095	PF00905	Penicillin binding protein transpeptidase domain
CT43_RS11100	PF02525	Flavodoxin-like fold
CT43_RS11105	PF01553	Acyltransferase
CT43_RS11110	PF03006	Haemolysin-III related
CT43_RS11115	PF02416	mttA/Hcf106 family
CT43_RS11120	PF00902	Sec-independent protein translocase protein (TatC)
CT43_RS11130	PF02645	Uncharacterised protein, DegV family COG1307
CT43_RS11140	PF02630	SCO1/SenC
CT43_RS11145	PF00011	Hsp20/alpha crystallin family
CT43_RS11150	PF13537	Glutamine amidotransferase domain
CT43_RS11150	PF00733	Asparagine synthase
CT43_RS11165	PF01520	N-acetylmuramoyl-L-alanine amidase
CT43_RS11165	PF05036	Sporulation related domain
CT43_RS11170	PF01497	Periplasmic binding protein
CT43_RS11175	PF01063	Amino-transferase class IV
CT43_RS11180	PF00881	Nitroreductase family
CT43_RS11195	PF00857	Isochorismatase family
CT43_RS11200	PF00293	NUDIX domain
CT43_RS11205	PF00924	Mechanosensitive ion channel
CT43_RS11210	PF07730	Histidine kinase
CT43_RS11210	PF13185	GAF domain
CT43_RS11215	PF00072	Response regulator receiver domain
CT43_RS11215	PF00196	Bacterial regulatory proteins, luxR family
CT43_RS11220	PF01418	Helix-turn-helix domain, rpiR family
CT43_RS11220	PF01380	SIS domain
CT43_RS11225	PF02567	Phenazine biosynthesis-like protein
CT43_RS11230	PF00107	Zinc-binding dehydrogenase
CT43_RS11230	PF08240	Alcohol dehydrogenase GroES-like domain
CT43_RS11245	PF00665	Integrase core domain
CT43_RS11250	PF01695	IstB-like ATP binding protein
CT43_RS11255	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CT43_RS11255	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CT43_RS11260	PF02447	GntP family permease
CT43_RS11265	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
CT43_RS11265	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
CT43_RS11270	PF10924	Protein of unknown function (DUF2711)
CT43_RS11285	PF03358	NADPH-dependent FMN reductase
CT43_RS11300	PF00005	ABC transporter
CT43_RS11300	PF00571	CBS domain
CT43_RS11305	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS11310	PF13520	Amino acid permease
CT43_RS11340	PF01595	Cyclin M transmembrane N-terminal domain
CT43_RS11340	PF03471	Transporter associated domain
CT43_RS11340	PF00571	CBS domain
CT43_RS11345	PF00171	Aldehyde dehydrogenase family
CT43_RS11350	PF07997	Protein of unknown function (DUF1694)
CT43_RS11355	PF09385	Histidine kinase N terminal
CT43_RS11365	PF00202	Aminotransferase class-III
CT43_RS11370	PF01144	Coenzyme A transferase
CT43_RS11375	PF01144	Coenzyme A transferase
CT43_RS11380	PF07687	Peptidase dimerisation domain
CT43_RS11380	PF01546	Peptidase family M20/M25/M40
CT43_RS11385	PF00583	Acetyltransferase (GNAT) family
CT43_RS11390	PF13426	PAS domain
CT43_RS11390	PF00158	Sigma-54 interaction domain
CT43_RS11390	PF02954	Bacterial regulatory protein, Fis family
CT43_RS11395	PF12544	Lysine-2,3-aminomutase 
CT43_RS11400	PF14122	YokU-like protein, putative antitoxin
CT43_RS11405	PF06855	YozE SAM-like fold
CT43_RS11415	PF14162	YozD-like protein
CT43_RS11425	PF08239	Bacterial SH3 domain
CT43_RS11425	PF00069	Protein kinase domain
CT43_RS11435	PF01569	PAP2 superfamily
CT43_RS11440	PF01545	Cation efflux family
CT43_RS11440	PF16916	Dimerisation domain of Zinc Transporter
CT43_RS11445	PF00085	Thioredoxin
CT43_RS11450	PF13302	Acetyltransferase (GNAT) domain
CT43_RS11500	PF10676	Spore germination protein gerPA/gerPF
CT43_RS11515	PF00106	short chain dehydrogenase
CT43_RS11535	PF00912	Transglycosylase
CT43_RS11535	PF00905	Penicillin binding protein transpeptidase domain
CT43_RS11545	PF07690	Major Facilitator Superfamily
CT43_RS11550	PF01521	Iron-sulphur cluster biosynthesis
CT43_RS11555	PF00285	Citrate synthase, C-terminal domain
CT43_RS11560	PF03972	MmgE/PrpD family
CT43_RS11570	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
CT43_RS11570	PF02770	Acyl-CoA dehydrogenase, middle domain
CT43_RS11570	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
CT43_RS11575	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
CT43_RS11575	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
CT43_RS11580	PF00171	Aldehyde dehydrogenase family
CT43_RS11585	PF01810	LysE type translocator
CT43_RS11590	PF00378	Enoyl-CoA hydratase/isomerase
CT43_RS11605	PF12320	Type 5 capsule protein repressor C-terminal domain
CT43_RS11605	PF00149	Calcineurin-like phosphoesterase
CT43_RS11610	PF13476	AAA domain
CT43_RS11620	PF01022	Bacterial regulatory protein, arsR family
CT43_RS11630	PF07690	Major Facilitator Superfamily
CT43_RS11635	PF00106	short chain dehydrogenase
CT43_RS11640	PF00425	chorismate binding enzyme
CT43_RS11645	PF00501	AMP-binding enzyme
CT43_RS11645	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS11650	PF00550	Phosphopantetheine attachment site
CT43_RS11650	PF00857	Isochorismatase family
CT43_RS11655	PF00550	Phosphopantetheine attachment site
CT43_RS11655	PF00668	Condensation domain
CT43_RS11655	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS11655	PF00501	AMP-binding enzyme
CT43_RS11655	PF00975	Thioesterase domain
CT43_RS11660	PF03621	MbtH-like protein
CT43_RS11665	PF07690	Major Facilitator Superfamily
CT43_RS11680	PF00216	Bacterial DNA-binding protein
CT43_RS11690	PF05163	DinB family
CT43_RS11695	PF00082	Subtilase family
CT43_RS11700	PF01235	Sodium:alanine symporter family
CT43_RS11720	PF00849	RNA pseudouridylate synthase
CT43_RS11720	PF01479	S4 domain
CT43_RS11725	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CT43_RS11725	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CT43_RS11725	PF02824	TGS domain
CT43_RS11725	PF03129	Anticodon binding domain
CT43_RS11730	PF00005	ABC transporter
CT43_RS11740	PF07690	Major Facilitator Superfamily
CT43_RS11755	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CT43_RS11755	PF00205	Thiamine pyrophosphate enzyme, central domain
CT43_RS11755	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CT43_RS11765	PF00753	Metallo-beta-lactamase superfamily
CT43_RS11790	PF00027	Cyclic nucleotide-binding domain
CT43_RS11805	PF01047	MarR family
CT43_RS11815	PF00753	Metallo-beta-lactamase superfamily
CT43_RS11815	PF16123	Hydroxyacylglutathione hydrolase C-terminus
CT43_RS11825	PF03176	MMPL family
CT43_RS11835	PF00302	Chloramphenicol acetyltransferase
CT43_RS11850	PF00583	Acetyltransferase (GNAT) family
CT43_RS11875	PF01593	Flavin containing amine oxidoreductase
CT43_RS11885	PF13302	Acetyltransferase (GNAT) domain
CT43_RS11895	PF00313	'Cold-shock' DNA-binding domain
CT43_RS11915	PF03466	LysR substrate binding domain
CT43_RS11915	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CT43_RS11920	PF02774	Semialdehyde dehydrogenase, dimerisation domain
CT43_RS11920	PF01118	Semialdehyde dehydrogenase, NAD binding domain
CT43_RS11940	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CT43_RS11940	PF03466	LysR substrate binding domain
CT43_RS11945	PF03475	3-alpha domain
CT43_RS11945	PF03473	MOSC domain
CT43_RS11960	PF00005	ABC transporter
CT43_RS11960	PF00664	ABC transporter transmembrane region
CT43_RS11965	PF00664	ABC transporter transmembrane region
CT43_RS11965	PF00005	ABC transporter
CT43_RS12005	PF00589	Phage integrase family
CT43_RS12010	PF00561	alpha/beta hydrolase fold
CT43_RS12050	PF01510	N-acetylmuramoyl-L-alanine amidase
CT43_RS12060	PF14436	Bacterial EndoU nuclease
CT43_RS12060	PF04740	LXG domain of WXG superfamily
CT43_RS12075	PF01810	LysE type translocator
CT43_RS12080	PF01381	Helix-turn-helix
CT43_RS12080	PF07883	Cupin domain
CT43_RS12110	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CT43_RS12110	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CT43_RS12115	PF08281	Sigma-70, region 4
CT43_RS12115	PF04542	Sigma-70 region 2 
CT43_RS12115	PF12680	SnoaL-like domain
CT43_RS12140	PF02638	Glycosyl hydrolase-like 10
CT43_RS12150	PF02378	Phosphotransferase system, EIIC 
CT43_RS12160	PF03702	Anhydro-N-acetylmuramic acid kinase
CT43_RS12165	PF01869	BadF/BadG/BcrA/BcrD ATPase family
CT43_RS12170	PF02660	Glycerol-3-phosphate acyltransferase
CT43_RS12175	PF00266	Aminotransferase class-V
CT43_RS12180	PF00291	Pyridoxal-phosphate dependent enzyme
CT43_RS12185	PF01047	MarR family
CT43_RS12190	PF07690	Major Facilitator Superfamily
CT43_RS12200	PF00753	Metallo-beta-lactamase superfamily
CT43_RS12200	PF16123	Hydroxyacylglutathione hydrolase C-terminus
CT43_RS12205	PF00271	Helicase conserved C-terminal domain
CT43_RS12205	PF00270	DEAD/DEAH box helicase
CT43_RS12220	PF16925	Tetracyclin repressor-like, C-terminal domain
CT43_RS12220	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS12235	PF09313	Domain of unknown function (DUF1971)
CT43_RS12235	PF03848	Tellurite resistance protein TehB
CT43_RS12245	PF08241	Methyltransferase domain
CT43_RS12250	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CT43_RS12250	PF00205	Thiamine pyrophosphate enzyme, central domain
CT43_RS12250	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CT43_RS12255	PF01047	MarR family
CT43_RS12260	PF00300	Histidine phosphatase superfamily (branch 1)
CT43_RS12265	PF14171	Toxin SpoIISA, type II toxin-antitoxin system
CT43_RS12295	PF01546	Peptidase family M20/M25/M40
CT43_RS12295	PF07687	Peptidase dimerisation domain
CT43_RS12310	PF04371	Porphyromonas-type peptidyl-arginine deiminase
CT43_RS12315	PF00196	Bacterial regulatory proteins, luxR family
CT43_RS12315	PF00072	Response regulator receiver domain
CT43_RS12325	PF18277	AbrB C-terminal domain
CT43_RS12325	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
CT43_RS12335	PF01925	Sulfite exporter TauE/SafE
CT43_RS12340	PF00132	Bacterial transferase hexapeptide (six repeats)
CT43_RS12345	PF00768	D-alanyl-D-alanine carboxypeptidase
CT43_RS12345	PF07943	Penicillin-binding protein 5, C-terminal domain
CT43_RS12360	PF07690	Major Facilitator Superfamily
CT43_RS12365	PF00668	Condensation domain
CT43_RS12365	PF00550	Phosphopantetheine attachment site
CT43_RS12365	PF00501	AMP-binding enzyme
CT43_RS12365	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS12370	PF07993	Male sterility protein
CT43_RS12370	PF00668	Condensation domain
CT43_RS12370	PF00550	Phosphopantetheine attachment site
CT43_RS12370	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS12370	PF00501	AMP-binding enzyme
CT43_RS12375	PF00501	AMP-binding enzyme
CT43_RS12375	PF00668	Condensation domain
CT43_RS12375	PF00550	Phosphopantetheine attachment site
CT43_RS12375	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS12380	PF01648	4'-phosphopantetheinyl transferase superfamily
CT43_RS12385	PF00975	Thioesterase domain
CT43_RS12395	PF01235	Sodium:alanine symporter family
CT43_RS12400	PF04960	Glutaminase
CT43_RS12405	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS12410	PF00072	Response regulator receiver domain
CT43_RS12410	PF08664	YcbB domain
CT43_RS12415	PF03323	Bacillus/Clostridium GerA spore germination protein
CT43_RS12420	PF03845	Spore germination protein
CT43_RS12425	PF05504	Spore germination B3/ GerAC like, C-terminal 
CT43_RS12430	PF14748	Pyrroline-5-carboxylate reductase dimerisation
CT43_RS12430	PF03807	NADP oxidoreductase coenzyme F420-dependent
CT43_RS12435	PF13520	Amino acid permease
CT43_RS12440	PF08459	UvrC Helix-hairpin-helix N-terminal
CT43_RS12440	PF01541	GIY-YIG catalytic domain
CT43_RS12440	PF12826	Helix-hairpin-helix motif
CT43_RS12440	PF02151	UvrB/uvrC motif
CT43_RS12445	PF12833	Helix-turn-helix domain
CT43_RS12445	PF17853	GGDEF-like domain
CT43_RS12460	PF05791	Bacillus haemolytic enterotoxin (HBL)
CT43_RS12465	PF05791	Bacillus haemolytic enterotoxin (HBL)
CT43_RS12470	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS12470	PF00989	PAS fold
CT43_RS12470	PF13426	PAS domain
CT43_RS12470	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS12470	PF13188	PAS domain
CT43_RS12475	PF03323	Bacillus/Clostridium GerA spore germination protein
CT43_RS12480	PF08386	TAP-like protein
CT43_RS12480	PF00561	alpha/beta hydrolase fold
CT43_RS12490	PF00269	Small, acid-soluble spore proteins, alpha/beta type
CT43_RS12525	PF01734	Patatin-like phospholipase
CT43_RS12525	PF00027	Cyclic nucleotide-binding domain
CT43_RS12530	PF01548	Transposase
CT43_RS12530	PF02371	Transposase IS116/IS110/IS902 family
CT43_RS12540	PF03717	Penicillin-binding Protein dimerisation domain
CT43_RS12540	PF05223	NTF2-like N-terminal transpeptidase domain
CT43_RS12540	PF00905	Penicillin binding protein transpeptidase domain
CT43_RS12545	PF08281	Sigma-70, region 4
CT43_RS12545	PF04542	Sigma-70 region 2 
CT43_RS12555	PF00905	Penicillin binding protein transpeptidase domain
CT43_RS12555	PF03717	Penicillin-binding Protein dimerisation domain
CT43_RS12560	PF00905	Penicillin binding protein transpeptidase domain
CT43_RS12560	PF03717	Penicillin-binding Protein dimerisation domain
CT43_RS12575	PF00149	Calcineurin-like phosphoesterase
CT43_RS12585	PF00005	ABC transporter
CT43_RS12595	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS12595	PF08359	YsiA-like protein, C-terminal region
CT43_RS12610	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
CT43_RS12610	PF02770	Acyl-CoA dehydrogenase, middle domain
CT43_RS12610	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
CT43_RS12615	PF02785	Biotin carboxylase C-terminal domain
CT43_RS12615	PF00289	Biotin carboxylase, N-terminal domain
CT43_RS12615	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CT43_RS12620	PF00364	Biotin-requiring enzyme
CT43_RS12625	PF00682	HMGL-like
CT43_RS12630	PF00378	Enoyl-CoA hydratase/isomerase
CT43_RS12635	PF01039	Carboxyl transferase domain
CT43_RS12640	PF00501	AMP-binding enzyme
CT43_RS12640	PF16177	Acetyl-coenzyme A synthetase N-terminus
CT43_RS12640	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS12650	PF02371	Transposase IS116/IS110/IS902 family
CT43_RS12650	PF01548	Transposase
CT43_RS12675	PF07943	Penicillin-binding protein 5, C-terminal domain
CT43_RS12675	PF00768	D-alanyl-D-alanine carboxypeptidase
CT43_RS12680	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS12680	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS12685	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS12685	PF00072	Response regulator receiver domain
CT43_RS12690	PF01966	HD domain
CT43_RS12695	PF13021	Domain of unknown function (DUF3885)
CT43_RS12700	PF01048	Phosphorylase superfamily
CT43_RS12715	PF02868	Thermolysin metallopeptidase, alpha-helical domain
CT43_RS12715	PF01447	Thermolysin metallopeptidase, catalytic domain
CT43_RS12715	PF03413	Peptidase propeptide and YPEB domain
CT43_RS12715	PF07504	Fungalysin/Thermolysin Propeptide Motif
CT43_RS12720	PF17853	GGDEF-like domain
CT43_RS12720	PF12833	Helix-turn-helix domain
CT43_RS12735	PF18002	T6 antigen Ig like domain
CT43_RS12735	PF17802	Prealbumin-like fold domain
CT43_RS12735	PF16569	Gram-positive pilin backbone subunit 2, Cna-B-like domain
CT43_RS12735	PF00746	LPXTG cell wall anchor motif
CT43_RS12750	PF17760	UvrA interaction domain
CT43_RS12750	PF00005	ABC transporter
CT43_RS12750	PF17755	UvrA DNA-binding domain
CT43_RS12755	PF09278	MerR, DNA binding
CT43_RS12755	PF00376	MerR family regulatory protein
CT43_RS12770	PF00665	Integrase core domain
CT43_RS12775	PF01695	IstB-like ATP binding protein
CT43_RS12780	PF01638	HxlR-like helix-turn-helix
CT43_RS12800	PF01636	Phosphotransferase enzyme family
CT43_RS12805	PF12833	Helix-turn-helix domain
CT43_RS12820	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS12820	PF00155	Aminotransferase class I and II
CT43_RS12830	PF03241	4-hydroxyphenylacetate 3-hydroxylase C terminal
CT43_RS12830	PF11794	4-hydroxyphenylacetate 3-hydroxylase N terminal
CT43_RS12845	PF08240	Alcohol dehydrogenase GroES-like domain
CT43_RS12845	PF00107	Zinc-binding dehydrogenase
CT43_RS12855	PF04239	Protein of unknown function (DUF421)
CT43_RS12860	PF08241	Methyltransferase domain
CT43_RS12865	PF01965	DJ-1/PfpI family
CT43_RS12875	PF08450	SMP-30/Gluconolactonase/LRE-like region
CT43_RS12880	PF01921	tRNA synthetases class I (K)
CT43_RS12885	PF07486	Cell Wall Hydrolase
CT43_RS12895	PF00072	Response regulator receiver domain
CT43_RS12895	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS12900	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS12915	PF00005	ABC transporter
CT43_RS12915	PF12848	ABC transporter
CT43_RS12930	PF00005	ABC transporter
CT43_RS12935	PF02687	FtsX-like permease family
CT43_RS12955	PF03447	Homoserine dehydrogenase, NAD binding domain
CT43_RS12955	PF00742	Homoserine dehydrogenase
CT43_RS12955	PF01842	ACT domain
CT43_RS12960	PF00155	Aminotransferase class I and II
CT43_RS12960	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS12965	PF07478	D-ala D-ala ligase C-terminus
CT43_RS12965	PF01820	D-ala D-ala ligase N-terminus
CT43_RS12970	PF03070	TENA/THI-4/PQQC family
CT43_RS12995	PF00589	Phage integrase family
CT43_RS12995	PF14659	Phage integrase, N-terminal SAM-like domain
CT43_RS13050	PF07319	Primosomal protein DnaI N-terminus
CT43_RS13050	PF01695	IstB-like ATP binding protein
CT43_RS13070	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
CT43_RS13070	PF18277	AbrB C-terminal domain
CT43_RS13075	PF01609	Transposase DDE domain
CT43_RS13080	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
CT43_RS13080	PF18277	AbrB C-terminal domain
CT43_RS13140	PF00589	Phage integrase family
CT43_RS13190	PF00574	Clp protease
CT43_RS13250	PF01548	Transposase
CT43_RS13250	PF02371	Transposase IS116/IS110/IS902 family
CT43_RS13260	PF13457	GW (Gly-Tryp) dipeptide domain
CT43_RS13260	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CT43_RS13315	PF00067	Cytochrome P450
CT43_RS13325	PF00132	Bacterial transferase hexapeptide (six repeats)
CT43_RS13330	PF07561	Domain of Unknown Function (DUF1540)
CT43_RS13340	PF00067	Cytochrome P450
CT43_RS13355	PF00989	PAS fold
CT43_RS13355	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS13355	PF13426	PAS domain
CT43_RS13355	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS13355	PF13188	PAS domain
CT43_RS13360	PF00905	Penicillin binding protein transpeptidase domain
CT43_RS13360	PF03717	Penicillin-binding Protein dimerisation domain
CT43_RS13370	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
CT43_RS13375	PF01177	Asp/Glu/Hydantoin racemase
CT43_RS13380	PF07155	ECF-type riboflavin transporter, S component
CT43_RS13385	PF00005	ABC transporter
CT43_RS13385	PF12558	ATP-binding cassette cobalt transporter
CT43_RS13395	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS13395	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS13440	PF13344	Haloacid dehalogenase-like hydrolase
CT43_RS13440	PF00293	NUDIX domain
CT43_RS13455	PF04229	GrpB protein
CT43_RS13460	PF00107	Zinc-binding dehydrogenase
CT43_RS13460	PF08240	Alcohol dehydrogenase GroES-like domain
CT43_RS13465	PF01569	PAP2 superfamily
CT43_RS13470	PF03793	PASTA domain
CT43_RS13470	PF03717	Penicillin-binding Protein dimerisation domain
CT43_RS13470	PF00905	Penicillin binding protein transpeptidase domain
CT43_RS13520	PF07739	TipAS antibiotic-recognition domain
CT43_RS13520	PF13411	MerR HTH family regulatory protein
CT43_RS13540	PF03009	Glycerophosphoryl diester phosphodiesterase family
CT43_RS13560	PF00155	Aminotransferase class I and II
CT43_RS13560	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS13565	PF00892	EamA-like transporter family
CT43_RS13570	PF01270	Glycosyl hydrolases family 8
CT43_RS13575	PF01156	Inosine-uridine preferring nucleoside hydrolase
CT43_RS13590	PF00293	NUDIX domain
CT43_RS13590	PF13344	Haloacid dehalogenase-like hydrolase
CT43_RS13600	PF00144	Beta-lactamase
CT43_RS13610	PF07690	Major Facilitator Superfamily
CT43_RS13620	PF09297	NADH pyrophosphatase zinc ribbon domain
CT43_RS13620	PF00293	NUDIX domain
CT43_RS13625	PF02768	DNA polymerase III beta subunit, C-terminal domain
CT43_RS13625	PF02767	DNA polymerase III beta subunit, central domain
CT43_RS13625	PF00712	DNA polymerase III beta subunit, N-terminal domain
CT43_RS13635	PF12706	Beta-lactamase superfamily domain
CT43_RS13660	PF09234	Domain of unknown function (DUF1963)
CT43_RS13685	PF01734	Patatin-like phospholipase
CT43_RS13690	PF08000	Bacterial PH domain
CT43_RS13700	PF12867	DinB superfamily
CT43_RS13715	PF02673	Bacitracin resistance protein BacA
CT43_RS13725	PF01541	GIY-YIG catalytic domain
CT43_RS13765	PF01266	FAD dependent oxidoreductase
CT43_RS13795	PF13419	Haloacid dehalogenase-like hydrolase
CT43_RS13800	PF00072	Response regulator receiver domain
CT43_RS13800	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS13805	PF16736	Single Cache-like 
CT43_RS13805	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS13805	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS13805	PF00989	PAS fold
CT43_RS13815	PF06906	Protein of unknown function (DUF1272)
CT43_RS13820	PF01037	Lrp/AsnC ligand binding domain
CT43_RS13835	PF00005	ABC transporter
CT43_RS13840	PF12704	MacB-like periplasmic core domain
CT43_RS13840	PF02687	FtsX-like permease family
CT43_RS13850	PF07859	alpha/beta hydrolase fold
CT43_RS13855	PF00282	Pyridoxal-dependent decarboxylase conserved domain
CT43_RS13860	PF00501	AMP-binding enzyme
CT43_RS13860	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS13860	PF00668	Condensation domain
CT43_RS13860	PF00550	Phosphopantetheine attachment site
CT43_RS13870	PF00128	Alpha amylase, catalytic domain
CT43_RS13870	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
CT43_RS13870	PF03714	Bacterial pullanase-associated domain
CT43_RS13875	PF07504	Fungalysin/Thermolysin Propeptide Motif
CT43_RS13875	PF01447	Thermolysin metallopeptidase, catalytic domain
CT43_RS13875	PF02868	Thermolysin metallopeptidase, alpha-helical domain
CT43_RS13875	PF03413	Peptidase propeptide and YPEB domain
CT43_RS13880	PF00149	Calcineurin-like phosphoesterase
CT43_RS13880	PF02872	5'-nucleotidase, C-terminal domain
CT43_RS13895	PF00344	SecY translocase
CT43_RS13900	PF02909	Tetracyclin repressor-like, C-terminal domain
CT43_RS13900	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS13905	PF01494	FAD binding domain
CT43_RS13910	PF00892	EamA-like transporter family
CT43_RS13915	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS13915	PF00155	Aminotransferase class I and II
CT43_RS13920	PF08240	Alcohol dehydrogenase GroES-like domain
CT43_RS13920	PF00107	Zinc-binding dehydrogenase
CT43_RS13925	PF00561	alpha/beta hydrolase fold
CT43_RS13950	PF06081	Aromatic acid exporter family member 1
CT43_RS13965	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
CT43_RS13975	PF07486	Cell Wall Hydrolase
CT43_RS13975	PF01471	Putative peptidoglycan binding domain
CT43_RS13995	PF03301	Tryptophan 2,3-dioxygenase
CT43_RS14000	PF04199	Putative cyclase
CT43_RS14005	PF00266	Aminotransferase class-V
CT43_RS14010	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS14010	PF08359	YsiA-like protein, C-terminal region
CT43_RS14035	PF01590	GAF domain
CT43_RS14035	PF02954	Bacterial regulatory protein, Fis family
CT43_RS14035	PF00158	Sigma-54 interaction domain
CT43_RS14050	PF13302	Acetyltransferase (GNAT) domain
CT43_RS14055	PF00455	DeoR C terminal sensor domain
CT43_RS14055	PF08220	DeoR-like helix-turn-helix domain
CT43_RS14070	PF02082	Transcriptional regulator
CT43_RS14085	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CT43_RS14085	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CT43_RS14090	PF02817	e3 binding domain
CT43_RS14090	PF00364	Biotin-requiring enzyme
CT43_RS14090	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CT43_RS14095	PF02779	Transketolase, pyrimidine binding domain
CT43_RS14095	PF02780	Transketolase, C-terminal domain
CT43_RS14100	PF00676	Dehydrogenase E1 component
CT43_RS14110	PF00106	short chain dehydrogenase
CT43_RS14115	PF13673	Acetyltransferase (GNAT) domain
CT43_RS14115	PF04229	GrpB protein
CT43_RS14150	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS14155	PF00571	CBS domain
CT43_RS14155	PF00005	ABC transporter
CT43_RS14160	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
CT43_RS14165	PF00574	Clp protease
CT43_RS14180	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
CT43_RS14185	PF13673	Acetyltransferase (GNAT) domain
CT43_RS14190	PF18416	N-acetylglucosamine binding protein domain 2
CT43_RS14190	PF03067	Lytic polysaccharide mono-oxygenase, cellulose-degrading
CT43_RS14195	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
CT43_RS14200	PF03781	Sulfatase-modifying factor enzyme 1
CT43_RS14210	PF10990	Protein of unknown function (DUF2809)
CT43_RS14220	PF04237	YjbR
CT43_RS14270	PF00583	Acetyltransferase (GNAT) family
CT43_RS14275	PF13538	UvrD-like helicase C-terminal domain
CT43_RS14285	PF13333	Integrase core domain
CT43_RS14285	PF00665	Integrase core domain
CT43_RS14285	PF13276	HTH-like domain
CT43_RS14305	PF00271	Helicase conserved C-terminal domain
CT43_RS14305	PF00570	HRDC domain
CT43_RS14305	PF16124	RecQ zinc-binding
CT43_RS14305	PF09382	RQC domain
CT43_RS14305	PF00270	DEAD/DEAH box helicase
CT43_RS14345	PF01368	DHH family
CT43_RS14345	PF02833	DHHA2 domain
CT43_RS14350	PF03067	Lytic polysaccharide mono-oxygenase, cellulose-degrading
CT43_RS14350	PF18416	N-acetylglucosamine binding protein domain 2
CT43_RS14365	PF02627	Carboxymuconolactone decarboxylase family
CT43_RS14370	PF01235	Sodium:alanine symporter family
CT43_RS14375	PF00171	Aldehyde dehydrogenase family
CT43_RS14380	PF00701	Dihydrodipicolinate synthetase family
CT43_RS14385	PF05544	Proline racemase
CT43_RS14390	PF05544	Proline racemase
CT43_RS14395	PF01266	FAD dependent oxidoreductase
CT43_RS14400	PF02954	Bacterial regulatory protein, Fis family
CT43_RS14400	PF13188	PAS domain
CT43_RS14400	PF00158	Sigma-54 interaction domain
CT43_RS14405	PF04324	BFD-like [2Fe-2S] binding domain
CT43_RS14405	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CT43_RS14415	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CT43_RS14415	PF04324	BFD-like [2Fe-2S] binding domain
CT43_RS14430	PF08876	Domain of unknown function (DUF1836)
CT43_RS14440	PF01966	HD domain
CT43_RS14445	PF09335	SNARE associated Golgi protein
CT43_RS14455	PF04914	DltD protein
CT43_RS14465	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CT43_RS14470	PF00877	NlpC/P60 family
CT43_RS14470	PF18348	Bacterial dipeptidyl-peptidase Sh3 domain
CT43_RS14475	PF13378	Enolase C-terminal domain-like
CT43_RS14475	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
CT43_RS14490	PF00248	Aldo/keto reductase family
CT43_RS14520	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
CT43_RS14520	PF08530	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CT43_RS14530	PF00672	HAMP domain
CT43_RS14530	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS14530	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS14535	PF00072	Response regulator receiver domain
CT43_RS14535	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS14550	PF13419	Haloacid dehalogenase-like hydrolase
CT43_RS14555	PF01048	Phosphorylase superfamily
CT43_RS14565	PF03808	Glycosyl transferase WecB/TagA/CpsF family
CT43_RS14570	PF01432	Peptidase family M3
CT43_RS14570	PF08439	Oligopeptidase F
CT43_RS14575	PF02645	Uncharacterised protein, DegV family COG1307
CT43_RS14600	PF07690	Major Facilitator Superfamily
CT43_RS14610	PF04519	Polymer-forming cytoskeletal
CT43_RS14615	PF13171	Protein of unknown function (DUF4004)
CT43_RS14620	PF12793	Sugar transport-related sRNA regulator N-term
CT43_RS14620	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CT43_RS14625	PF07690	Major Facilitator Superfamily
CT43_RS14650	PF04226	Transglycosylase associated protein
CT43_RS14665	PF08241	Methyltransferase domain
CT43_RS14700	PF00155	Aminotransferase class I and II
CT43_RS14705	PF07977	FabA-like domain
CT43_RS14710	PF03630	Fumble 
CT43_RS14730	PF00005	ABC transporter
CT43_RS14775	PF01594	AI-2E family transporter
CT43_RS14785	PF00296	Luciferase-like monooxygenase
CT43_RS14790	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS14795	PF09084	NMT1/THI5 like
CT43_RS14800	PF00005	ABC transporter
CT43_RS14835	PF02522	Aminoglycoside 3-N-acetyltransferase
CT43_RS14845	PF13536	Putative multidrug resistance efflux transporter
CT43_RS14855	PF12867	DinB superfamily
CT43_RS14885	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CT43_RS14895	PF01965	DJ-1/PfpI family
CT43_RS14900	PF01522	Polysaccharide deacetylase
CT43_RS14910	PF03741	Integral membrane protein TerC family
CT43_RS14915	PF00884	Sulfatase
CT43_RS14920	PF00005	ABC transporter
CT43_RS14920	PF12848	ABC transporter
CT43_RS14925	PF03176	MMPL family
CT43_RS14930	PF16295	Tetracyclin repressor-like, C-terminal domain
CT43_RS14930	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS14940	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CT43_RS14945	PF01842	ACT domain
CT43_RS14945	PF02153	Prephenate dehydrogenase
CT43_RS14950	PF00155	Aminotransferase class I and II
CT43_RS14955	PF01264	Chorismate synthase
CT43_RS14960	PF01817	Chorismate mutase type II
CT43_RS14960	PF00793	DAHP synthetase I family
CT43_RS14980	PF01636	Phosphotransferase enzyme family
CT43_RS15005	PF01476	LysM domain
CT43_RS15005	PF06725	3D domain
CT43_RS15015	PF08031	Berberine and berberine like 
CT43_RS15015	PF01565	FAD binding domain 
CT43_RS15035	PF06039	Malate:quinone oxidoreductase (Mqo)
CT43_RS15040	PF13407	Periplasmic binding protein domain
CT43_RS15045	PF02653	Branched-chain amino acid transport system / permease component
CT43_RS15050	PF02653	Branched-chain amino acid transport system / permease component
CT43_RS15055	PF00005	ABC transporter
CT43_RS15060	PF00005	ABC transporter
CT43_RS15065	PF00325	Bacterial regulatory proteins, crp family
CT43_RS15065	PF04198	Putative sugar-binding domain
CT43_RS15070	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CT43_RS15070	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CT43_RS15080	PF01791	DeoC/LacD family aldolase
CT43_RS15090	PF03992	Antibiotic biosynthesis monooxygenase
CT43_RS15100	PF01022	Bacterial regulatory protein, arsR family
CT43_RS15105	PF01773	Na+ dependent nucleoside transporter N-terminus
CT43_RS15105	PF07662	Na+ dependent nucleoside transporter C-terminus
CT43_RS15110	PF00171	Aldehyde dehydrogenase family
CT43_RS15115	PF00696	Amino acid kinase family
CT43_RS15115	PF01472	PUA domain
CT43_RS15120	PF03807	NADP oxidoreductase coenzyme F420-dependent
CT43_RS15120	PF14748	Pyrroline-5-carboxylate reductase dimerisation
CT43_RS15125	PF01546	Peptidase family M20/M25/M40
CT43_RS15130	PF09339	IclR helix-turn-helix domain
CT43_RS15130	PF01614	Bacterial transcriptional regulator
CT43_RS15135	PF00324	Amino acid permease
CT43_RS15155	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
CT43_RS15160	PF00487	Fatty acid desaturase
CT43_RS15165	PF05547	Immune inhibitor A peptidase M6
CT43_RS15170	PF04294	VanW like protein
CT43_RS15175	PF00245	Alkaline phosphatase
CT43_RS15180	PF11188	Protein of unknown function (DUF2975)
CT43_RS15185	PF13443	Cro/C1-type HTH DNA-binding domain
CT43_RS15205	PF13302	Acetyltransferase (GNAT) domain
CT43_RS15210	PF12681	Glyoxalase-like domain
CT43_RS15235	PF17863	AAA lid domain
CT43_RS15235	PF07726	ATPase family associated with various cellular activities (AAA)
CT43_RS15250	PF07690	Major Facilitator Superfamily
CT43_RS15255	PF00202	Aminotransferase class-III
CT43_RS15260	PF00199	Catalase
CT43_RS15260	PF06628	Catalase-related immune-responsive
CT43_RS15265	PF08453	Peptidase family M9 N-terminal
CT43_RS15265	PF18496	Collagenase G catalytic helper subdomain
CT43_RS15265	PF04151	Bacterial pre-peptidase C-terminal domain
CT43_RS15265	PF01752	Collagenase
CT43_RS15275	PF13382	Adenine deaminase C-terminal domain
CT43_RS15275	PF01979	Amidohydrolase family
CT43_RS15280	PF00144	Beta-lactamase
CT43_RS15295	PF00881	Nitroreductase family
CT43_RS15300	PF01047	MarR family
CT43_RS15305	PF00679	Elongation factor G C-terminus
CT43_RS15305	PF03764	Elongation factor G, domain IV
CT43_RS15305	PF14492	Elongation Factor G, domain II
CT43_RS15305	PF00009	Elongation factor Tu GTP binding domain
CT43_RS15320	PF05406	WGR domain
CT43_RS15325	PF16363	GDP-mannose 4,6 dehydratase
CT43_RS15330	PF01695	IstB-like ATP binding protein
CT43_RS15335	PF00665	Integrase core domain
CT43_RS15350	PF12833	Helix-turn-helix domain
CT43_RS15355	PF00583	Acetyltransferase (GNAT) family
CT43_RS15370	PF00892	EamA-like transporter family
CT43_RS15375	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS15375	PF00155	Aminotransferase class I and II
CT43_RS15380	PF02639	Uncharacterized BCR, YaiI/YqxD family COG1671
CT43_RS15385	PF13031	Protein of unknown function (DUF3892)
CT43_RS15420	PF01925	Sulfite exporter TauE/SafE
CT43_RS15430	PF00324	Amino acid permease
CT43_RS15440	PF08713	DNA alkylation repair enzyme
CT43_RS15450	PF00989	PAS fold
CT43_RS15450	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS15450	PF18698	Histidine kinase sensor domain
CT43_RS15450	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS15450	PF00672	HAMP domain
CT43_RS15455	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS15455	PF00072	Response regulator receiver domain
CT43_RS15465	PF02687	FtsX-like permease family
CT43_RS15465	PF12704	MacB-like periplasmic core domain
CT43_RS15465	PF00005	ABC transporter
CT43_RS15485	PF00293	NUDIX domain
CT43_RS15490	PF04989	Cephalosporin hydroxylase
CT43_RS15495	PF10502	Signal peptidase, peptidase S26 
CT43_RS15500	PF03717	Penicillin-binding Protein dimerisation domain
CT43_RS15500	PF00905	Penicillin binding protein transpeptidase domain
CT43_RS15505	PF02146	Sir2 family
CT43_RS15510	PF01470	Pyroglutamyl peptidase
CT43_RS15525	PF03746	LamB/YcsF family
CT43_RS15530	PF02626	Carboxyltransferase domain, subdomain A and B 
CT43_RS15535	PF02682	Carboxyltransferase domain, subdomain C and D
CT43_RS15540	PF01614	Bacterial transcriptional regulator
CT43_RS15540	PF09339	IclR helix-turn-helix domain
CT43_RS15550	PF10502	Signal peptidase, peptidase S26 
CT43_RS15555	PF03932	CutC family
CT43_RS15570	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
CT43_RS15570	PF02770	Acyl-CoA dehydrogenase, middle domain
CT43_RS15570	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
CT43_RS15585	PF07670	Nucleoside recognition
CT43_RS15600	PF10903	Protein of unknown function (DUF2691)
CT43_RS15605	PF02915	Rubrerythrin
CT43_RS15620	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS15625	PF05547	Immune inhibitor A peptidase M6
CT43_RS15630	PF00144	Beta-lactamase
CT43_RS15640	PF02872	5'-nucleotidase, C-terminal domain
CT43_RS15640	PF17936	Bacterial Ig domain
CT43_RS15640	PF00149	Calcineurin-like phosphoesterase
CT43_RS15645	PF00561	alpha/beta hydrolase fold
CT43_RS15650	PF00857	Isochorismatase family
CT43_RS15670	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CT43_RS15670	PF03466	LysR substrate binding domain
CT43_RS15675	PF01047	MarR family
CT43_RS15680	PF01544	CorA-like Mg2+ transporter protein
CT43_RS15725	PF03845	Spore germination protein
CT43_RS15745	PF03073	TspO/MBR family
CT43_RS15750	PF00875	DNA photolyase
CT43_RS15750	PF03441	FAD binding domain of DNA photolyase
CT43_RS15760	PF10070	Uncharacterized protein conserved in bacteria (DUF2309)
CT43_RS15765	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
CT43_RS15765	PF00361	Proton-conducting membrane transporter
CT43_RS15770	PF10057	Uncharacterized conserved protein (DUF2294)
CT43_RS15775	PF01522	Polysaccharide deacetylase
CT43_RS15780	PF00583	Acetyltransferase (GNAT) family
CT43_RS15785	PF01040	UbiA prenyltransferase family
CT43_RS15790	PF01451	Low molecular weight phosphotyrosine protein phosphatase
CT43_RS15795	PF01758	Sodium Bile acid symporter family
CT43_RS15800	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CT43_RS15805	PF01022	Bacterial regulatory protein, arsR family
CT43_RS15815	PF01872	RibD C-terminal domain
CT43_RS15825	PF00550	Phosphopantetheine attachment site
CT43_RS15825	PF07993	Male sterility protein
CT43_RS15830	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS15830	PF18665	Tetracyclin repressor-like, C-terminal domain
CT43_RS15850	PF08453	Peptidase family M9 N-terminal
CT43_RS15850	PF18496	Collagenase G catalytic helper subdomain
CT43_RS15850	PF01752	Collagenase
CT43_RS15880	PF07690	Major Facilitator Superfamily
CT43_RS15885	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS15895	PF01037	Lrp/AsnC ligand binding domain
CT43_RS15910	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CT43_RS15935	PF00144	Beta-lactamase
CT43_RS15940	PF00144	Beta-lactamase
CT43_RS15945	PF08803	Putative mono-oxygenase ydhR
CT43_RS15955	PF12802	MarR family
CT43_RS15970	PF02371	Transposase IS116/IS110/IS902 family
CT43_RS15970	PF01548	Transposase
CT43_RS15985	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS15985	PF00072	Response regulator receiver domain
CT43_RS15990	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS15990	PF00672	HAMP domain
CT43_RS15990	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS16020	PF00196	Bacterial regulatory proteins, luxR family
CT43_RS16020	PF00072	Response regulator receiver domain
CT43_RS16030	PF00005	ABC transporter
CT43_RS16035	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS16035	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS16040	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS16040	PF00072	Response regulator receiver domain
CT43_RS16065	PF00258	Flavodoxin
CT43_RS16065	PF00067	Cytochrome P450
CT43_RS16065	PF00175	Oxidoreductase NAD-binding domain 
CT43_RS16065	PF00667	FAD binding domain
CT43_RS16070	PF07690	Major Facilitator Superfamily
CT43_RS16080	PF00326	Prolyl oligopeptidase family
CT43_RS16090	PF00291	Pyridoxal-phosphate dependent enzyme
CT43_RS16105	PF02073	Thermophilic metalloprotease (M29)
CT43_RS16115	PF01139	tRNA-splicing ligase RtcB
CT43_RS16125	PF04072	Leucine carboxyl methyltransferase
CT43_RS16140	PF01565	FAD binding domain 
CT43_RS16140	PF08031	Berberine and berberine like 
CT43_RS16145	PF00005	ABC transporter
CT43_RS16150	PF02687	FtsX-like permease family
CT43_RS16170	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS16170	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS16170	PF00672	HAMP domain
CT43_RS16175	PF00072	Response regulator receiver domain
CT43_RS16175	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS16180	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CT43_RS16180	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_RS16195	PF17676	LD-carboxypeptidase C-terminal domain
CT43_RS16195	PF02016	LD-carboxypeptidase N-terminal domain
CT43_RS16215	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CT43_RS16215	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CT43_RS16215	PF01842	ACT domain
CT43_RS16220	PF00266	Aminotransferase class-V
CT43_RS16235	PF07883	Cupin domain
CT43_RS16240	PF01497	Periplasmic binding protein
CT43_RS16240	PF12833	Helix-turn-helix domain
CT43_RS16245	PF01804	Penicillin amidase
CT43_RS16255	PF01476	LysM domain
CT43_RS16255	PF01510	N-acetylmuramoyl-L-alanine amidase
CT43_RS16255	PF01471	Putative peptidoglycan binding domain
CT43_RS16275	PF02557	D-alanyl-D-alanine carboxypeptidase
CT43_RS16280	PF09587	Bacterial capsule synthesis protein PGA_cap
CT43_RS16285	PF14044	NETI protein
CT43_RS16290	PF07690	Major Facilitator Superfamily
CT43_RS16300	PF12697	Alpha/beta hydrolase family
CT43_RS16305	PF01047	MarR family
CT43_RS16310	PF07690	Major Facilitator Superfamily
CT43_RS16325	PF00144	Beta-lactamase
CT43_RS16330	PF17440	Thiol-activated cytolysin beta sandwich domain
CT43_RS16330	PF01289	Thiol-activated cytolysin
CT43_RS16335	PF02667	Short chain fatty acid transporter
CT43_RS16345	PF02525	Flavodoxin-like fold
CT43_RS16365	PF14256	YwiC-like protein
CT43_RS16375	PF00005	ABC transporter
CT43_RS16395	PF03737	Aldolase/RraA
CT43_RS16400	PF03606	C4-dicarboxylate anaerobic carrier
CT43_RS16405	PF04231	Endonuclease I
CT43_RS16415	PF01048	Phosphorylase superfamily
CT43_RS16425	PF01381	Helix-turn-helix
CT43_RS16440	PF04073	Aminoacyl-tRNA editing domain
CT43_RS16445	PF13393	Histidyl-tRNA synthetase
CT43_RS16445	PF03129	Anticodon binding domain
CT43_RS16460	PF01638	HxlR-like helix-turn-helix
CT43_RS16465	PF00881	Nitroreductase family
CT43_RS16475	PF00224	Pyruvate kinase, barrel domain
CT43_RS16475	PF00391	PEP-utilising enzyme, mobile domain
CT43_RS16475	PF02887	Pyruvate kinase, alpha/beta domain
CT43_RS16505	PF00005	ABC transporter
CT43_RS16530	PF13419	Haloacid dehalogenase-like hydrolase
CT43_RS16540	PF13350	Tyrosine phosphatase family
CT43_RS16555	PF00293	NUDIX domain
CT43_RS16555	PF13344	Haloacid dehalogenase-like hydrolase
CT43_RS16565	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CT43_RS16570	PF00480	ROK family
CT43_RS16580	PF14602	Hexapeptide repeat of succinyl-transferase
CT43_RS16580	PF12464	Maltose acetyltransferase 
CT43_RS16585	PF00579	tRNA synthetases class I (W and Y)
CT43_RS16590	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
CT43_RS16590	PF13288	DXP reductoisomerase C-terminal domain
CT43_RS16590	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
CT43_RS16620	PF08003	Protein of unknown function (DUF1698)
CT43_RS16630	PF07690	Major Facilitator Superfamily
CT43_RS16645	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CT43_RS16655	PF01595	Cyclin M transmembrane N-terminal domain
CT43_RS16655	PF03471	Transporter associated domain
CT43_RS16655	PF00571	CBS domain
CT43_RS16660	PF13411	MerR HTH family regulatory protein
CT43_RS16670	PF00483	Nucleotidyl transferase
CT43_RS16675	PF16363	GDP-mannose 4,6 dehydratase
CT43_RS16680	PF08421	Putative zinc binding domain
CT43_RS16680	PF08484	C-methyltransferase C-terminal domain
CT43_RS16685	PF01370	NAD dependent epimerase/dehydratase family
CT43_RS16695	PF00892	EamA-like transporter family
CT43_RS16705	PF00805	Pentapeptide repeats (8 copies)
CT43_RS16710	PF06906	Protein of unknown function (DUF1272)
CT43_RS16715	PF10282	Lactonase, 7-bladed beta-propeller
CT43_RS16725	PF02447	GntP family permease
CT43_RS16730	PF00923	Transaldolase/Fructose-6-phosphate aldolase
CT43_RS16735	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
CT43_RS16735	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
CT43_RS16740	PF02780	Transketolase, C-terminal domain
CT43_RS16740	PF00456	Transketolase, thiamine diphosphate binding domain
CT43_RS16740	PF02779	Transketolase, pyrimidine binding domain
CT43_RS16745	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
CT43_RS16745	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
CT43_RS16750	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
CT43_RS16750	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
CT43_RS16755	PF08240	Alcohol dehydrogenase GroES-like domain
CT43_RS16755	PF00107	Zinc-binding dehydrogenase
CT43_RS16760	PF00296	Luciferase-like monooxygenase
CT43_RS16765	PF00109	Beta-ketoacyl synthase, N-terminal domain
CT43_RS16765	PF08659	KR domain
CT43_RS16765	PF00550	Phosphopantetheine attachment site
CT43_RS16765	PF08240	Alcohol dehydrogenase GroES-like domain
CT43_RS16765	PF02801	Beta-ketoacyl synthase, C-terminal domain
CT43_RS16765	PF16197	Ketoacyl-synthetase C-terminal extension
CT43_RS16765	PF00698	Acyl transferase domain
CT43_RS16765	PF00107	Zinc-binding dehydrogenase
CT43_RS16765	PF14765	Polyketide synthase dehydratase
CT43_RS16770	PF00106	short chain dehydrogenase
CT43_RS16775	PF01447	Thermolysin metallopeptidase, catalytic domain
CT43_RS16775	PF03413	Peptidase propeptide and YPEB domain
CT43_RS16775	PF07504	Fungalysin/Thermolysin Propeptide Motif
CT43_RS16775	PF02868	Thermolysin metallopeptidase, alpha-helical domain
CT43_RS16785	PF12729	Four helix bundle sensory module for signal transduction
CT43_RS16785	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CT43_RS16785	PF00672	HAMP domain
CT43_RS16790	PF06941	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
CT43_RS16795	PF01872	RibD C-terminal domain
CT43_RS16795	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
CT43_RS16800	PF00925	GTP cyclohydrolase II
CT43_RS16800	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
CT43_RS16805	PF01638	HxlR-like helix-turn-helix
CT43_RS16820	PF00248	Aldo/keto reductase family
CT43_RS16825	PF07690	Major Facilitator Superfamily
CT43_RS16835	PF03928	Haem-degrading
CT43_RS16845	PF08274	PhnA Zinc-Ribbon 
CT43_RS16845	PF03831	PhnA domain
CT43_RS16850	PF01740	STAS domain
CT43_RS16850	PF00916	Sulfate permease family
CT43_RS16895	PF03960	ArsC family
CT43_RS16900	PF01638	HxlR-like helix-turn-helix
CT43_RS16905	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS16905	PF07702	UTRA domain
CT43_RS16915	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CT43_RS16915	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CT43_RS16925	PF01638	HxlR-like helix-turn-helix
CT43_RS16930	PF01638	HxlR-like helix-turn-helix
CT43_RS16935	PF00248	Aldo/keto reductase family
CT43_RS16980	PF02567	Phenazine biosynthesis-like protein
CT43_RS17000	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS17000	PF00501	AMP-binding enzyme
CT43_RS17005	PF02525	Flavodoxin-like fold
CT43_RS17010	PF01638	HxlR-like helix-turn-helix
CT43_RS17015	PF01022	Bacterial regulatory protein, arsR family
CT43_RS17025	PF12791	Anti-sigma factor N-terminus
CT43_RS17030	PF04542	Sigma-70 region 2 
CT43_RS17035	PF00535	Glycosyl transferase family 2
CT43_RS17035	PF18674	TarS beta-glycosyltransferase C-terminal domain 1
CT43_RS17040	PF01810	LysE type translocator
CT43_RS17070	PF01061	ABC-2 type transporter
CT43_RS17075	PF00005	ABC transporter
CT43_RS17075	PF13732	Domain of unknown function (DUF4162)
CT43_RS17090	PF03063	Prismane/CO dehydrogenase family
CT43_RS17095	PF00753	Metallo-beta-lactamase superfamily
CT43_RS17100	PF01471	Putative peptidoglycan binding domain
CT43_RS17100	PF01183	Glycosyl hydrolases family 25
CT43_RS17125	PF00144	Beta-lactamase
CT43_RS17165	PF00753	Metallo-beta-lactamase superfamily
CT43_RS17170	PF00324	Amino acid permease
CT43_RS17175	PF07690	Major Facilitator Superfamily
CT43_RS17200	PF02585	GlcNAc-PI de-N-acetylase
CT43_RS17205	PF08830	Protein of unknown function (DUF1806)
CT43_RS17210	PF03600	Citrate transporter
CT43_RS17225	PF01497	Periplasmic binding protein
CT43_RS17230	PF01032	FecCD transport family
CT43_RS17235	PF01032	FecCD transport family
CT43_RS17240	PF05675	Protein of unknown function (DUF817)
CT43_RS17245	PF13170	Protein of unknown function (DUF4003)
CT43_RS17260	PF10901	Protein of unknown function (DUF2690)
CT43_RS17270	PF03466	LysR substrate binding domain
CT43_RS17270	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CT43_RS17275	PF08240	Alcohol dehydrogenase GroES-like domain
CT43_RS17275	PF00107	Zinc-binding dehydrogenase
CT43_RS17290	PF00488	MutS domain V
CT43_RS17290	PF01713	Smr domain
CT43_RS17300	PF00128	Alpha amylase, catalytic domain
CT43_RS17300	PF09154	Domain of unknown function (DUF1939)
CT43_RS17305	PF00797	N-acetyltransferase
CT43_RS17310	PF01432	Peptidase family M3
CT43_RS17310	PF08439	Oligopeptidase F
CT43_RS17315	PF04371	Porphyromonas-type peptidyl-arginine deiminase
CT43_RS17330	PF01062	Bestrophin, RFP-TM, chloride channel
CT43_RS17335	PF06146	Phosphate-starvation-inducible E
CT43_RS17340	PF04371	Porphyromonas-type peptidyl-arginine deiminase
CT43_RS17345	PF00144	Beta-lactamase
CT43_RS17360	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CT43_RS17360	PF03466	LysR substrate binding domain
CT43_RS17370	PF03009	Glycerophosphoryl diester phosphodiesterase family
CT43_RS17375	PF01494	FAD binding domain
CT43_RS17385	PF01022	Bacterial regulatory protein, arsR family
CT43_RS17390	PF00107	Zinc-binding dehydrogenase
CT43_RS17390	PF08240	Alcohol dehydrogenase GroES-like domain
CT43_RS17395	PF02696	Uncharacterized ACR, YdiU/UPF0061 family
CT43_RS17400	PF18801	response regulator aspartate phosphatase H, N terminal
CT43_RS17410	PF04299	Putative FMN-binding domain
CT43_RS17415	PF04229	GrpB protein
CT43_RS17425	PF01565	FAD binding domain 
CT43_RS17425	PF02913	FAD linked oxidases, C-terminal domain
CT43_RS17450	PF00388	Phosphatidylinositol-specific phospholipase C, X domain
CT43_RS17455	PF18416	N-acetylglucosamine binding protein domain 2
CT43_RS17455	PF03067	Lytic polysaccharide mono-oxygenase, cellulose-degrading
CT43_RS17465	PF03323	Bacillus/Clostridium GerA spore germination protein
CT43_RS17490	PF00704	Glycosyl hydrolases family 18
CT43_RS17490	PF00041	Fibronectin type III domain
CT43_RS17490	PF00553	Cellulose binding domain
CT43_RS17505	PF03707	Bacterial signalling protein N terminal repeat
CT43_RS17505	PF00563	EAL domain
CT43_RS17505	PF00990	Diguanylate cyclase, GGDEF domain
CT43_RS17510	PF00005	ABC transporter
CT43_RS17510	PF16326	ABC transporter C-terminal domain
CT43_RS17515	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS17520	PF07968	Leukocidin/Hemolysin toxin family
CT43_RS17525	PF00395	S-layer homology domain
CT43_RS17525	PF01520	N-acetylmuramoyl-L-alanine amidase
CT43_RS17530	PF02557	D-alanyl-D-alanine carboxypeptidase
CT43_RS17555	PF00989	PAS fold
CT43_RS17555	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS17555	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS17560	PF01752	Collagenase
CT43_RS17560	PF08453	Peptidase family M9 N-terminal
CT43_RS17560	PF18496	Collagenase G catalytic helper subdomain
CT43_RS17565	PF02308	MgtC family
CT43_RS17580	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CT43_RS17585	PF00497	Bacterial extracellular solute-binding proteins, family 3
CT43_RS17590	PF00005	ABC transporter
CT43_RS17595	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS17600	PF04294	VanW like protein
CT43_RS17610	PF13037	Domain of unknown function (DUF3898)
CT43_RS17610	PF13039	Protein of unknown function (DUF3900)
CT43_RS17625	PF00313	'Cold-shock' DNA-binding domain
CT43_RS17635	PF00258	Flavodoxin
CT43_RS17645	PF00293	NUDIX domain
CT43_RS17655	PF00132	Bacterial transferase hexapeptide (six repeats)
CT43_RS17665	PF00106	short chain dehydrogenase
CT43_RS17675	PF00206	Lyase
CT43_RS17675	PF14698	Argininosuccinate lyase C-terminal
CT43_RS17685	PF01156	Inosine-uridine preferring nucleoside hydrolase
CT43_RS17690	PF00474	Sodium:solute symporter family
CT43_RS17700	PF00171	Aldehyde dehydrogenase family
CT43_RS17710	PF14151	YfhD-like protein
CT43_RS17715	PF13243	Squalene-hopene cyclase C-terminal domain
CT43_RS17715	PF13249	Squalene-hopene cyclase N-terminal domain
CT43_RS17720	PF02681	Divergent PAP2 family
CT43_RS17725	PF00892	EamA-like transporter family
CT43_RS17730	PF06961	Protein of unknown function (DUF1294)
CT43_RS17745	PF10609	NUBPL iron-transfer P-loop NTPase
CT43_RS17755	PF02391	MoaE protein
CT43_RS17760	PF03454	MoeA C-terminal region (domain IV)
CT43_RS17760	PF00994	Probable molybdopterin binding domain
CT43_RS17760	PF03453	MoeA N-terminal region (domain I and II)
CT43_RS17765	PF00899	ThiF family
CT43_RS17770	PF01226	Formate/nitrite transporter
CT43_RS17775	PF04055	Radical SAM superfamily
CT43_RS17775	PF06463	Molybdenum Cofactor Synthesis C
CT43_RS17780	PF02634	FdhD/NarQ family
CT43_RS17785	PF10057	Uncharacterized conserved protein (DUF2294)
CT43_RS17790	PF07849	Protein of unknown function (DUF1641)
CT43_RS17795	PF00037	4Fe-4S binding domain
CT43_RS17795	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CT43_RS17795	PF00384	Molybdopterin oxidoreductase
CT43_RS17795	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CT43_RS17795	PF01568	Molydopterin dinucleotide binding domain
CT43_RS17805	PF03323	Bacillus/Clostridium GerA spore germination protein
CT43_RS17820	PF13520	Amino acid permease
CT43_RS17855	PF08241	Methyltransferase domain
CT43_RS17860	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CT43_RS17865	PF00665	Integrase core domain
CT43_RS17865	PF13276	HTH-like domain
CT43_RS17865	PF13333	Integrase core domain
CT43_RS17875	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CT43_RS17880	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CT43_RS17885	PF03816	Cell envelope-related transcriptional attenuator domain
CT43_RS17905	PF00005	ABC transporter
CT43_RS17905	PF13732	Domain of unknown function (DUF4162)
CT43_RS17925	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CT43_RS17925	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CT43_RS17930	PF00521	DNA gyrase/topoisomerase IV, subunit A
CT43_RS17930	PF03989	DNA gyrase C-terminal domain, beta-propeller
CT43_RS17935	PF01751	Toprim domain
CT43_RS17935	PF00986	DNA gyrase B subunit, carboxyl terminus
CT43_RS17935	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS17935	PF00204	DNA gyrase B
CT43_RS17940	PF13380	CoA binding domain
CT43_RS17945	PF13180	PDZ domain
CT43_RS17955	PF04055	Radical SAM superfamily
CT43_RS17960	PF13597	Anaerobic ribonucleoside-triphosphate reductase
CT43_RS17960	PF03477	ATP cone domain
CT43_RS17965	PF02660	Glycerol-3-phosphate acyltransferase
CT43_RS17970	PF01521	Iron-sulphur cluster biosynthesis
CT43_RS17975	PF03061	Thioesterase superfamily
CT43_RS17980	PF01476	LysM domain
CT43_RS17980	PF00704	Glycosyl hydrolases family 18
CT43_RS17985	PF08177	Small acid-soluble spore protein N family
CT43_RS17990	PF13040	Fur-regulated basic protein B
CT43_RS18000	PF14579	Helix-hairpin-helix motif
CT43_RS18000	PF02811	PHP domain
CT43_RS18000	PF00929	Exonuclease
CT43_RS18000	PF01336	OB-fold nucleic acid binding domain
CT43_RS18000	PF11490	DNA polymerase III polC-type N-terminus II
CT43_RS18000	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
CT43_RS18000	PF07733	Bacterial DNA polymerase III alpha NTPase domain
CT43_RS18005	PF00578	AhpC/TSA family
CT43_RS18015	PF00664	ABC transporter transmembrane region
CT43_RS18015	PF03412	Peptidase C39 family
CT43_RS18015	PF00005	ABC transporter
CT43_RS18020	PF00694	Aconitase C-terminal domain
CT43_RS18020	PF00330	Aconitase family (aconitate hydratase)
CT43_RS18030	PF01522	Polysaccharide deacetylase
CT43_RS18040	PF08179	Small acid-soluble spore protein P family
CT43_RS18050	PF07690	Major Facilitator Superfamily
CT43_RS18060	PF02272	DHHA1 domain
CT43_RS18060	PF01411	tRNA synthetases class II (A)
CT43_RS18060	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CT43_RS18065	PF13344	Haloacid dehalogenase-like hydrolase
CT43_RS18065	PF00293	NUDIX domain
CT43_RS18075	PF02803	Thiolase, C-terminal domain
CT43_RS18075	PF00108	Thiolase, N-terminal domain
CT43_RS18080	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS18080	PF00501	AMP-binding enzyme
CT43_RS18085	PF02632	BioY family
CT43_RS18090	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS18090	PF00501	AMP-binding enzyme
CT43_RS18095	PF01381	Helix-turn-helix
CT43_RS18110	PF05532	CsbD-like
CT43_RS18130	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_RS18130	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CT43_RS18140	PF13188	PAS domain
CT43_RS18140	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS18140	PF00989	PAS fold
CT43_RS18140	PF13426	PAS domain
CT43_RS18140	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS18145	PF01738	Dienelactone hydrolase family
CT43_RS18150	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CT43_RS18155	PF00474	Sodium:solute symporter family
CT43_RS18160	PF01645	Conserved region in glutamate synthase
CT43_RS18165	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
CT43_RS18170	PF02559	CarD-like/TRCF domain
CT43_RS18175	PF00491	Arginase family
CT43_RS18180	PF01979	Amidohydrolase family
CT43_RS18185	PF01175	Urocanase Rossmann-like domain
CT43_RS18185	PF17392	Urocanase C-terminal domain
CT43_RS18185	PF17391	Urocanase N-terminal domain
CT43_RS18190	PF00221	Aromatic amino acid lyase
CT43_RS18195	PF09021	HutP
CT43_RS18200	PF01209	ubiE/COQ5 methyltransferase family
CT43_RS18220	PF11084	Protein of unknown function (DUF2621)
CT43_RS18225	PF07301	Protein of unknown function (DUF1453)
CT43_RS18230	PF02683	Cytochrome C biogenesis protein transmembrane region
CT43_RS18240	PF07687	Peptidase dimerisation domain
CT43_RS18240	PF01546	Peptidase family M20/M25/M40
CT43_RS18250	PF00005	ABC transporter
CT43_RS18265	PF03466	LysR substrate binding domain
CT43_RS18265	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CT43_RS18270	PF03788	LrgA family
CT43_RS18275	PF04172	LrgB-like family 
CT43_RS18280	PF13344	Haloacid dehalogenase-like hydrolase
CT43_RS18280	PF00293	NUDIX domain
CT43_RS18290	PF01925	Sulfite exporter TauE/SafE
CT43_RS18310	PF08239	Bacterial SH3 domain
CT43_RS18310	PF01183	Glycosyl hydrolases family 25
CT43_RS18315	PF00664	ABC transporter transmembrane region
CT43_RS18315	PF00005	ABC transporter
CT43_RS18320	PF00664	ABC transporter transmembrane region
CT43_RS18320	PF00005	ABC transporter
CT43_RS18325	PF03672	Uncharacterised protein family (UPF0154)
CT43_RS18330	PF10747	Sporulation inhibitor of replication protein SirA 
CT43_RS18335	PF02779	Transketolase, pyrimidine binding domain
CT43_RS18335	PF02780	Transketolase, C-terminal domain
CT43_RS18335	PF00456	Transketolase, thiamine diphosphate binding domain
CT43_RS18340	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS18345	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS18350	PF00005	ABC transporter
CT43_RS18355	PF00497	Bacterial extracellular solute-binding proteins, family 3
CT43_RS18360	PF00149	Calcineurin-like phosphoesterase
CT43_RS18360	PF02872	5'-nucleotidase, C-terminal domain
CT43_RS18365	PF01609	Transposase DDE domain
CT43_RS18370	PF00149	Calcineurin-like phosphoesterase
CT43_RS18370	PF02872	5'-nucleotidase, C-terminal domain
CT43_RS18375	PF05979	Bacterial protein of unknown function (DUF896)
CT43_RS18380	PF00239	Resolvase, N terminal domain
CT43_RS18385	PF01726	LexA DNA binding domain
CT43_RS18385	PF00717	Peptidase S24-like
CT43_RS18400	PF03551	Transcriptional regulator PadR-like family
CT43_RS18405	PF03951	Glutamine synthetase, beta-Grasp domain
CT43_RS18405	PF00120	Glutamine synthetase, catalytic domain
CT43_RS18410	PF13411	MerR HTH family regulatory protein
CT43_RS18415	PF06838	Methionine gamma-lyase 
CT43_RS18420	PF01926	50S ribosome-binding GTPase
CT43_RS18420	PF16360	GTP-binding GTPase Middle Region
CT43_RS18420	PF13167	GTP-binding GTPase N-terminal
CT43_RS18425	PF03458	UPF0126 domain
CT43_RS18435	PF17866	AAA lid domain
CT43_RS18435	PF00004	ATPase family associated with various cellular activities (AAA)
CT43_RS18450	PF13276	HTH-like domain
CT43_RS18450	PF00665	Integrase core domain
CT43_RS18450	PF13333	Integrase core domain
CT43_RS18460	PF17209	Hfq protein
CT43_RS18475	PF06725	3D domain
CT43_RS18475	PF01476	LysM domain
CT43_RS18480	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CT43_RS18480	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CT43_RS18485	PF00294	pfkB family carbohydrate kinase
CT43_RS18490	PF00455	DeoR C terminal sensor domain
CT43_RS18490	PF08220	DeoR-like helix-turn-helix domain
CT43_RS18495	PF00465	Iron-containing alcohol dehydrogenase 
CT43_RS18500	PF04238	Protein of unknown function (DUF420)
CT43_RS18515	PF00324	Amino acid permease
CT43_RS18520	PF00041	Fibronectin type III domain
CT43_RS18520	PF00704	Glycosyl hydrolases family 18
CT43_RS18525	PF00149	Calcineurin-like phosphoesterase
CT43_RS18525	PF10518	TAT (twin-arginine translocation) pathway signal sequence
CT43_RS18530	PF01226	Formate/nitrite transporter
CT43_RS18535	PF00216	Bacterial DNA-binding protein
CT43_RS18545	PF00403	Heavy-metal-associated domain
CT43_RS18550	PF00403	Heavy-metal-associated domain
CT43_RS18555	PF02583	Metal-sensitive transcriptional repressor
CT43_RS18570	PF08241	Methyltransferase domain
CT43_RS18575	PF00756	Putative esterase
CT43_RS18580	PF00005	ABC transporter
CT43_RS18585	PF01032	FecCD transport family
CT43_RS18590	PF01032	FecCD transport family
CT43_RS18595	PF01497	Periplasmic binding protein
CT43_RS18600	PF03372	Endonuclease/Exonuclease/phosphatase family
CT43_RS18605	PF02805	Metal binding domain of Ada
CT43_RS18605	PF12833	Helix-turn-helix domain
CT43_RS18610	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
CT43_RS18610	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
CT43_RS18615	PF00730	HhH-GPD superfamily base excision DNA repair protein
CT43_RS18615	PF07934	8-oxoguanine DNA glycosylase, N-terminal domain
CT43_RS18620	PF07687	Peptidase dimerisation domain
CT43_RS18620	PF01546	Peptidase family M20/M25/M40
CT43_RS18640	PF00561	alpha/beta hydrolase fold
CT43_RS18645	PF00990	Diguanylate cyclase, GGDEF domain
CT43_RS18645	PF00563	EAL domain
CT43_RS18645	PF03707	Bacterial signalling protein N terminal repeat
CT43_RS18650	PF04101	Glycosyltransferase family 28 C-terminal domain
CT43_RS18650	PF03033	Glycosyltransferase family 28 N-terminal domain
CT43_RS18660	PF16363	GDP-mannose 4,6 dehydratase
CT43_RS18665	PF08485	Polysaccharide biosynthesis protein C-terminal
CT43_RS18665	PF02719	Polysaccharide biosynthesis protein
CT43_RS18675	PF10787	Uncharacterised protein from bacillus cereus group
CT43_RS18680	PF04172	LrgB-like family 
CT43_RS18685	PF03788	LrgA family
CT43_RS18690	PF00155	Aminotransferase class I and II
CT43_RS18690	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS18700	PF07702	UTRA domain
CT43_RS18700	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS18705	PF00232	Glycosyl hydrolase family 1
CT43_RS18710	PF00388	Phosphatidylinositol-specific phospholipase C, X domain
CT43_RS18715	PF00082	Subtilase family
CT43_RS18720	PF07486	Cell Wall Hydrolase
CT43_RS18730	PF00884	Sulfatase
CT43_RS18740	PF01695	IstB-like ATP binding protein
CT43_RS18745	PF00665	Integrase core domain
CT43_RS18750	PF00350	Dynamin family
CT43_RS18760	PF01119	DNA mismatch repair protein, C-terminal domain
CT43_RS18760	PF08676	MutL C terminal dimerisation domain
CT43_RS18765	PF05190	MutS family domain IV
CT43_RS18765	PF00488	MutS domain V
CT43_RS18765	PF05188	MutS domain II
CT43_RS18765	PF01624	MutS domain I
CT43_RS18765	PF05192	MutS domain III
CT43_RS18770	PF10628	Outer spore coat protein E (CotE)
CT43_RS18775	PF06133	Control of competence regulator ComK, YlbF/YmcA
CT43_RS18780	PF01938	TRAM domain
CT43_RS18780	PF00919	Uncharacterized protein family UPF0004
CT43_RS18780	PF04055	Radical SAM superfamily
CT43_RS18785	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CT43_RS18790	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
CT43_RS18790	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
CT43_RS18790	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
CT43_RS18795	PF01244	Membrane dipeptidase (Peptidase family M19)
CT43_RS18800	PF04232	Stage V sporulation protein S (SpoVS)
CT43_RS18805	PF13277	YmdB-like protein
CT43_RS18810	PF01966	HD domain
CT43_RS18810	PF12072	Domain of unknown function (DUF3552)
CT43_RS18810	PF00013	KH domain
CT43_RS18820	PF00154	recA bacterial DNA recombination protein
CT43_RS18825	PF02464	Competence-damaged protein
CT43_RS18825	PF18146	Damage-inducible protein CinA KH domain
CT43_RS18825	PF00994	Probable molybdopterin binding domain
CT43_RS18830	PF01066	CDP-alcohol phosphatidyltransferase
CT43_RS18835	PF13464	Domain of unknown function (DUF4115)
CT43_RS18840	PF11868	Protein of unknown function (DUF3388)
CT43_RS18845	PF11588	Protein of unknown function (DUF3243)
CT43_RS18855	PF05193	Peptidase M16 inactive domain
CT43_RS18855	PF00675	Insulinase (Peptidase family M16)
CT43_RS18860	PF05193	Peptidase M16 inactive domain
CT43_RS18865	PF02653	Branched-chain amino acid transport system / permease component
CT43_RS18870	PF02653	Branched-chain amino acid transport system / permease component
CT43_RS18875	PF00005	ABC transporter
CT43_RS18880	PF02608	ABC transporter substrate-binding protein PnrA-like
CT43_RS18885	PF07702	UTRA domain
CT43_RS18885	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS18895	PF17854	FtsK alpha domain
CT43_RS18895	PF01580	FtsK/SpoIIIE family
CT43_RS18895	PF09397	Ftsk gamma domain
CT43_RS18900	PF14035	YlzJ-like protein
CT43_RS18905	PF00574	Clp protease
CT43_RS18910	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
CT43_RS18910	PF17770	Ribonuclease J C-terminal domain
CT43_RS18910	PF00753	Metallo-beta-lactamase superfamily
CT43_RS18915	PF00701	Dihydrodipicolinate synthetase family
CT43_RS18920	PF00696	Amino acid kinase family
CT43_RS18920	PF13840	ACT domain 
CT43_RS18930	PF02441	Flavoprotein
CT43_RS18940	PF14431	YwqJ-like deaminase
CT43_RS18940	PF14449	Pre-toxin TG
CT43_RS18940	PF04740	LXG domain of WXG superfamily
CT43_RS18965	PF01548	Transposase
CT43_RS18965	PF02371	Transposase IS116/IS110/IS902 family
CT43_RS19080	PF00589	Phage integrase family
CT43_RS19095	PF10676	Spore germination protein gerPA/gerPF
CT43_RS19125	PF00772	DnaB-like helicase N terminal domain
CT43_RS19125	PF03796	DnaB-like helicase C terminal domain
CT43_RS19160	PF01381	Helix-turn-helix
CT43_RS19185	PF02441	Flavoprotein
CT43_RS19190	PF16924	Dipicolinate synthase subunit A N-terminal domain
CT43_RS19190	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
CT43_RS19195	PF05239	PRC-barrel domain
CT43_RS19200	PF00675	Insulinase (Peptidase family M16)
CT43_RS19200	PF05193	Peptidase M16 inactive domain
CT43_RS19205	PF01522	Polysaccharide deacetylase
CT43_RS19210	PF00575	S1 RNA binding domain
CT43_RS19210	PF00013	KH domain
CT43_RS19210	PF01138	3' exoribonuclease family, domain 1
CT43_RS19210	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
CT43_RS19210	PF03725	3' exoribonuclease family, domain 2
CT43_RS19215	PF00312	Ribosomal protein S15
CT43_RS19220	PF06574	FAD synthetase
CT43_RS19220	PF01687	Riboflavin kinase
CT43_RS19225	PF01509	TruB family pseudouridylate synthase (N terminal domain)
CT43_RS19225	PF16198	tRNA pseudouridylate synthase B C-terminal domain
CT43_RS19230	PF02033	Ribosome-binding factor A
CT43_RS19235	PF04456	Protein of unknown function (DUF503)
CT43_RS19240	PF11987	Translation-initiation factor 2
CT43_RS19240	PF04760	Translation initiation factor IF-2, N-terminal region
CT43_RS19240	PF00009	Elongation factor Tu GTP binding domain
CT43_RS19245	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
CT43_RS19250	PF04296	Protein of unknown function (DUF448)
CT43_RS19255	PF08529	NusA N-terminal domain
CT43_RS19255	PF00575	S1 RNA binding domain
CT43_RS19255	PF13184	NusA-like KH domain
CT43_RS19260	PF02576	RimP N-terminal domain
CT43_RS19260	PF17384	RimP C-terminal SH3 domain
CT43_RS19265	PF02811	PHP domain
CT43_RS19265	PF14579	Helix-hairpin-helix motif
CT43_RS19265	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
CT43_RS19265	PF07733	Bacterial DNA polymerase III alpha NTPase domain
CT43_RS19265	PF11490	DNA polymerase III polC-type N-terminus II
CT43_RS19265	PF14480	DNA polymerase III polC-type N-terminus I
CT43_RS19265	PF00929	Exonuclease
CT43_RS19270	PF03129	Anticodon binding domain
CT43_RS19270	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CT43_RS19270	PF04073	Aminoacyl-tRNA editing domain
CT43_RS19275	PF17820	PDZ domain
CT43_RS19275	PF02163	Peptidase family M50
CT43_RS19280	PF13288	DXP reductoisomerase C-terminal domain
CT43_RS19280	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
CT43_RS19280	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
CT43_RS19290	PF01255	Putative undecaprenyl diphosphate synthase
CT43_RS19295	PF01765	Ribosome recycling factor
CT43_RS19300	PF00696	Amino acid kinase family
CT43_RS19305	PF00889	Elongation factor TS
CT43_RS19310	PF00318	Ribosomal protein S2
CT43_RS19315	PF08222	CodY helix-turn-helix domain
CT43_RS19315	PF06018	CodY GAF-like domain
CT43_RS19325	PF00227	Proteasome subunit
CT43_RS19330	PF02899	Phage integrase, N-terminal SAM-like domain
CT43_RS19330	PF00589	Phage integrase family
CT43_RS19335	PF01134	Glucose inhibited division protein A
CT43_RS19340	PF01751	Toprim domain
CT43_RS19340	PF01396	Topoisomerase DNA binding C4 zinc finger
CT43_RS19340	PF01131	DNA topoisomerase
CT43_RS19345	PF02481	DNA recombination-mediator protein A
CT43_RS19350	PF00549	CoA-ligase
CT43_RS19350	PF02629	CoA binding domain
CT43_RS19355	PF08442	ATP-grasp domain
CT43_RS19355	PF00549	CoA-ligase
CT43_RS19360	PF01351	Ribonuclease HII
CT43_RS19365	PF01926	50S ribosome-binding GTPase
CT43_RS19370	PF10502	Signal peptidase, peptidase S26 
CT43_RS19375	PF01245	Ribosomal protein L19
CT43_RS19380	PF01746	tRNA (Guanine-1)-methyltransferase
CT43_RS19385	PF05239	PRC-barrel domain
CT43_RS19385	PF01782	RimM N-terminal domain
CT43_RS19395	PF00886	Ribosomal protein S16
CT43_RS19400	PF02881	SRP54-type protein, helical bundle domain
CT43_RS19400	PF02978	Signal peptide binding domain
CT43_RS19400	PF00448	SRP54-type protein, GTPase domain
CT43_RS19405	PF04297	Putative helix-turn-helix protein, YlxM / p13 like
CT43_RS19410	PF02881	SRP54-type protein, helical bundle domain
CT43_RS19410	PF00448	SRP54-type protein, GTPase domain
CT43_RS19415	PF06470	SMC proteins Flexible Hinge Domain
CT43_RS19415	PF02463	RecF/RecN/SMC N terminal domain
CT43_RS19420	PF14622	Ribonuclease-III-like
CT43_RS19420	PF00035	Double-stranded RNA binding motif
CT43_RS19425	PF00550	Phosphopantetheine attachment site
CT43_RS19435	PF00698	Acyl transferase domain
CT43_RS19440	PF02504	Fatty acid synthesis protein
CT43_RS19445	PF03061	Thioesterase superfamily
CT43_RS19450	PF00270	DEAD/DEAH box helicase
CT43_RS19450	PF17191	RecG wedge domain
CT43_RS19450	PF00271	Helicase conserved C-terminal domain
CT43_RS19455	PF13684	Dihydroxyacetone kinase family
CT43_RS19455	PF02734	DAK2 domain
CT43_RS19460	PF03780	Asp23 family, cell envelope-related function
CT43_RS19465	PF00830	Ribosomal L28 family
CT43_RS19470	PF08183	Stage V sporulation protein family
CT43_RS19480	PF00834	Ribulose-phosphate 3 epimerase family
CT43_RS19485	PF16745	RsgA N-terminal domain
CT43_RS19485	PF03193	RsgA GTPase
CT43_RS19490	PF03793	PASTA domain
CT43_RS19490	PF00069	Protein kinase domain
CT43_RS19500	PF04055	Radical SAM superfamily
CT43_RS19505	PF01029	NusB family
CT43_RS19505	PF01189	16S rRNA methyltransferase RsmB/F
CT43_RS19510	PF02911	Formyl transferase, C-terminal domain
CT43_RS19510	PF00551	Formyl transferase
CT43_RS19515	PF01327	Polypeptide deformylase
CT43_RS19520	PF04851	Type III restriction enzyme, res subunit
CT43_RS19520	PF00271	Helicase conserved C-terminal domain
CT43_RS19520	PF17764	3′ DNA-binding domain (3′BD)
CT43_RS19520	PF18074	Primosomal protein N C-terminal domain
CT43_RS19520	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
CT43_RS19525	PF02441	Flavoprotein
CT43_RS19525	PF04127	DNA / pantothenate metabolism flavoprotein
CT43_RS19530	PF01192	RNA polymerase Rpb6 
CT43_RS19535	PF00625	Guanylate kinase
CT43_RS19540	PF04025	Domain of unknown function (DUF370)
CT43_RS19545	PF03755	YicC-like family, N-terminal region 
CT43_RS19545	PF08340	Domain of unknown function (DUF1732)
CT43_RS19550	PF00689	Cation transporting ATPase, C-terminus
CT43_RS19550	PF00690	Cation transporter/ATPase, N-terminus
CT43_RS19555	PF05670	NFACT protein RNA binding domain
CT43_RS19565	PF01321	Creatinase/Prolidase N-terminal domain
CT43_RS19565	PF00557	Metallopeptidase family M24
CT43_RS19600	PF00156	Phosphoribosyl transferase domain
CT43_RS19605	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
CT43_RS19610	PF01180	Dihydroorotate dehydrogenase
CT43_RS19615	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
CT43_RS19620	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CT43_RS19620	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CT43_RS19620	PF02142	MGS-like domain
CT43_RS19625	PF00117	Glutamine amidotransferase class-I
CT43_RS19625	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
CT43_RS19630	PF01979	Amidohydrolase family
CT43_RS19635	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CT43_RS19635	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
CT43_RS19640	PF00860	Permease family
CT43_RS19645	PF00156	Phosphoribosyl transferase domain
CT43_RS19650	PF01479	S4 domain
CT43_RS19650	PF00849	RNA pseudouridylate synthase
CT43_RS19655	PF01252	Signal peptidase (SPase) II
CT43_RS19665	PF00133	tRNA synthetases class I (I, L, M and V)
CT43_RS19665	PF08264	Anticodon-binding domain of tRNA
CT43_RS19665	PF06827	Zinc finger found in FPG and IleRS
CT43_RS19670	PF05103	DivIVA protein
CT43_RS19675	PF17774	Putative RNA-binding domain in YlmH
CT43_RS19675	PF01479	S4 domain
CT43_RS19680	PF02325	YGGT family
CT43_RS19685	PF04472	Cell division protein SepF
CT43_RS19690	PF01168	Alanine racemase, N-terminal domain
CT43_RS19695	PF02578	Multi-copper polyphenol oxidoreductase laccase
CT43_RS19700	PF05239	PRC-barrel domain
CT43_RS19705	PF04539	Sigma-70 region 3
CT43_RS19705	PF04545	Sigma-70, region 4
CT43_RS19705	PF04542	Sigma-70 region 2 
CT43_RS19710	PF04545	Sigma-70, region 4
CT43_RS19710	PF04542	Sigma-70 region 2 
CT43_RS19715	PF03419	Sporulation factor SpoIIGA 
CT43_RS19720	PF12327	FtsZ family, C-terminal domain
CT43_RS19720	PF00091	Tubulin/FtsZ family, GTPase domain
CT43_RS19725	PF02491	SHS2 domain inserted in FTSA
CT43_RS19735	PF01565	FAD binding domain 
CT43_RS19735	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
CT43_RS19740	PF04101	Glycosyltransferase family 28 C-terminal domain
CT43_RS19740	PF03033	Glycosyltransferase family 28 N-terminal domain
CT43_RS19745	PF01098	Cell cycle protein
CT43_RS19750	PF02875	Mur ligase family, glutamate ligase domain
CT43_RS19750	PF08245	Mur ligase middle domain
CT43_RS19755	PF00953	Glycosyl transferase family 4
CT43_RS19755	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
CT43_RS19760	PF08245	Mur ligase middle domain
CT43_RS19760	PF02875	Mur ligase family, glutamate ligase domain
CT43_RS19760	PF01225	Mur ligase family, catalytic domain
CT43_RS19765	PF03793	PASTA domain
CT43_RS19765	PF00905	Penicillin binding protein transpeptidase domain
CT43_RS19765	PF03717	Penicillin-binding Protein dimerisation domain
CT43_RS19770	PF03717	Penicillin-binding Protein dimerisation domain
CT43_RS19770	PF03793	PASTA domain
CT43_RS19770	PF00905	Penicillin binding protein transpeptidase domain
CT43_RS19775	PF04977	Septum formation initiator
CT43_RS19780	PF01795	MraW methylase family
CT43_RS19785	PF10079	Bacillithiol biosynthesis BshC 
CT43_RS19790	PF08546	Ketopantoate reductase PanE/ApbA C terminal
CT43_RS19790	PF02558	Ketopantoate reductase PanE/ApbA
CT43_RS19795	PF00583	Acetyltransferase (GNAT) family
CT43_RS19805	PF01783	Ribosomal L32p protein family
CT43_RS19810	PF02620	Large ribosomal RNA subunit accumulation protein YceD
CT43_RS19815	PF05636	HIGH Nucleotidyl Transferase
CT43_RS19820	PF13180	PDZ domain
CT43_RS19820	PF05362	Lon protease (S16) C-terminal proteolytic domain
CT43_RS19825	PF01734	Patatin-like phospholipase
CT43_RS19830	PF07670	Nucleoside recognition
CT43_RS19835	PF01467	Cytidylyltransferase-like
CT43_RS19850	PF09902	Uncharacterized protein conserved in bacteria (DUF2129)
CT43_RS19855	PF06133	Control of competence regulator ComK, YlbF/YmcA
CT43_RS19860	PF00300	Histidine phosphatase superfamily (branch 1)
CT43_RS19865	PF14003	YlbE-like protein
CT43_RS19875	PF14504	CAP-associated N-terminal
CT43_RS19875	PF00188	Cysteine-rich secretory protein family
CT43_RS19880	PF08868	YugN-like family
CT43_RS19890	PF13333	Integrase core domain
CT43_RS19890	PF13276	HTH-like domain
CT43_RS19890	PF00665	Integrase core domain
CT43_RS19895	PF00795	Carbon-nitrogen hydrolase
CT43_RS19900	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
CT43_RS19905	PF00795	Carbon-nitrogen hydrolase
CT43_RS19910	PF09678	Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
CT43_RS19915	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
CT43_RS19920	PF00510	Cytochrome c oxidase subunit III
CT43_RS19930	PF00034	Cytochrome c
CT43_RS19930	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
CT43_RS19930	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
CT43_RS19935	PF01040	UbiA prenyltransferase family
CT43_RS19940	PF02628	Cytochrome oxidase assembly protein
CT43_RS19945	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CT43_RS19945	PF00289	Biotin carboxylase, N-terminal domain
CT43_RS19945	PF02785	Biotin carboxylase C-terminal domain
CT43_RS19945	PF00682	HMGL-like
CT43_RS19945	PF02436	Conserved carboxylase domain
CT43_RS19945	PF00364	Biotin-requiring enzyme
CT43_RS19950	PF01098	Cell cycle protein
CT43_RS19955	PF07408	Protein of unknown function (DUF1507)
CT43_RS19965	PF02562	PhoH-like protein
CT43_RS19965	PF13638	PIN domain
CT43_RS19975	PF09963	Uncharacterized protein conserved in bacteria (DUF2197)
CT43_RS19985	PF14036	YlaH-like protein
CT43_RS19990	PF03144	Elongation factor Tu domain 2
CT43_RS19990	PF00679	Elongation factor G C-terminus
CT43_RS19990	PF14492	Elongation Factor G, domain II
CT43_RS19990	PF00009	Elongation factor Tu GTP binding domain
CT43_RS20000	PF00459	Inositol monophosphatase family
CT43_RS20010	PF06335	Protein of unknown function (DUF1054)
CT43_RS20015	PF05256	Uncharacterised protein family (UPF0223)
CT43_RS20020	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
CT43_RS20020	PF01276	Orn/Lys/Arg decarboxylase, major domain
CT43_RS20060	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CT43_RS20060	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CT43_RS20065	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CT43_RS20065	PF00364	Biotin-requiring enzyme
CT43_RS20065	PF02817	e3 binding domain
CT43_RS20070	PF02780	Transketolase, C-terminal domain
CT43_RS20070	PF02779	Transketolase, pyrimidine binding domain
CT43_RS20075	PF00676	Dehydrogenase E1 component
CT43_RS20085	PF01327	Polypeptide deformylase
CT43_RS20095	PF07288	Protein of unknown function (DUF1447)
CT43_RS20100	PF00753	Metallo-beta-lactamase superfamily
CT43_RS20100	PF17770	Ribonuclease J C-terminal domain
CT43_RS20100	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
CT43_RS20105	PF02080	TrkA-C domain
CT43_RS20105	PF02254	TrkA-N domain
CT43_RS20115	PF07687	Peptidase dimerisation domain
CT43_RS20115	PF01546	Peptidase family M20/M25/M40
CT43_RS20120	PF00132	Bacterial transferase hexapeptide (six repeats)
CT43_RS20120	PF08503	Tetrahydrodipicolinate succinyltransferase N-terminal
CT43_RS20120	PF14602	Hexapeptide repeat of succinyl-transferase
CT43_RS20125	PF03466	LysR substrate binding domain
CT43_RS20125	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CT43_RS20140	PF04308	Ribonuclease H-like
CT43_RS20150	PF08796	Protein of unknown function (DUF1797)
CT43_RS20165	PF10388	EAL-domain associated signalling protein domain
CT43_RS20165	PF00563	EAL domain
CT43_RS20175	PF00149	Calcineurin-like phosphoesterase
CT43_RS20175	PF10518	TAT (twin-arginine translocation) pathway signal sequence
CT43_RS20185	PF13090	Polyphosphate kinase C-terminal domain 2
CT43_RS20185	PF02503	Polyphosphate kinase middle domain
CT43_RS20185	PF17941	Polyphosphate kinase C-terminal domain 1
CT43_RS20185	PF13089	Polyphosphate kinase N-terminal domain
CT43_RS20190	PF02541	Ppx/GppA phosphatase family
CT43_RS20195	PF14177	YkyB-like protein
CT43_RS20220	PF07690	Major Facilitator Superfamily
CT43_RS20230	PF01717	Cobalamin-independent synthase, Catalytic domain
CT43_RS20230	PF08267	Cobalamin-independent synthase, N-terminal domain
CT43_RS20240	PF14040	Deoxyribonuclease NucA/NucB
CT43_RS20250	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS20250	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS20260	PF00155	Aminotransferase class I and II
CT43_RS20265	PF00356	Bacterial regulatory proteins, lacI family
CT43_RS20265	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
CT43_RS20270	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS20275	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS20280	PF13416	Bacterial extracellular solute-binding protein
CT43_RS20285	PF16657	Maltogenic Amylase, C-terminal domain
CT43_RS20285	PF02903	Alpha amylase, N-terminal ig-like domain
CT43_RS20285	PF00128	Alpha amylase, catalytic domain
CT43_RS20290	PF00128	Alpha amylase, catalytic domain
CT43_RS20290	PF16657	Maltogenic Amylase, C-terminal domain
CT43_RS20295	PF17912	MalK OB fold domain
CT43_RS20295	PF03459	TOBE domain
CT43_RS20295	PF00005	ABC transporter
CT43_RS20335	PF02803	Thiolase, C-terminal domain
CT43_RS20335	PF00108	Thiolase, N-terminal domain
CT43_RS20340	PF00293	NUDIX domain
CT43_RS20365	PF03551	Transcriptional regulator PadR-like family
CT43_RS20380	PF01008	Initiation factor 2 subunit family
CT43_RS20385	PF01636	Phosphotransferase enzyme family
CT43_RS20390	PF00795	Carbon-nitrogen hydrolase
CT43_RS20395	PF00155	Aminotransferase class I and II
CT43_RS20400	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
CT43_RS20400	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
CT43_RS20410	PF00596	Class II Aldolase and Adducin N-terminal domain
CT43_RS20415	PF03079	ARD/ARD' family
CT43_RS20430	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
CT43_RS20430	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
CT43_RS20435	PF00144	Beta-lactamase
CT43_RS20440	PF08448	PAS fold
CT43_RS20440	PF00990	Diguanylate cyclase, GGDEF domain
CT43_RS20445	PF00881	Nitroreductase family
CT43_RS20460	PF05524	PEP-utilising enzyme, N-terminal
CT43_RS20460	PF00391	PEP-utilising enzyme, mobile domain
CT43_RS20460	PF02896	PEP-utilising enzyme, TIM barrel domain
CT43_RS20465	PF00381	PTS HPr component phosphorylation site
CT43_RS20475	PF00874	PRD domain
CT43_RS20475	PF03123	CAT RNA binding domain
CT43_RS20485	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS20485	PF07702	UTRA domain
CT43_RS20490	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
CT43_RS20495	PF01979	Amidohydrolase family
CT43_RS20505	PF04079	Segregation and condensation complex subunit ScpB
CT43_RS20510	PF02616	Segregation and condensation protein ScpA
CT43_RS20515	PF03745	Domain of unknown function (DUF309)
CT43_RS20520	PF00583	Acetyltransferase (GNAT) family
CT43_RS20525	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
CT43_RS20530	PF06207	Protein of unknown function (DUF1002)
CT43_RS20540	PF03323	Bacillus/Clostridium GerA spore germination protein
CT43_RS20545	PF14097	Stage V sporulation protein AE1
CT43_RS20550	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
CT43_RS20555	PF07451	Stage V sporulation protein AD (SpoVAD)
CT43_RS20560	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
CT43_RS20565	PF13782	Stage V sporulation protein AB
CT43_RS20570	PF12164	Stage V sporulation protein AA
CT43_RS20580	PF00209	Sodium:neurotransmitter symporter family
CT43_RS20585	PF04542	Sigma-70 region 2 
CT43_RS20585	PF04545	Sigma-70, region 4
CT43_RS20585	PF04539	Sigma-70 region 3
CT43_RS20590	PF13581	Histidine kinase-like ATPase domain
CT43_RS20595	PF01740	STAS domain
CT43_RS20600	PF00768	D-alanyl-D-alanine carboxypeptidase
CT43_RS20600	PF07943	Penicillin-binding protein 5, C-terminal domain
CT43_RS20605	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS20610	PF00005	ABC transporter
CT43_RS20630	PF01047	MarR family
CT43_RS20640	PF00860	Permease family
CT43_RS20645	PF01544	CorA-like Mg2+ transporter protein
CT43_RS20650	PF00591	Glycosyl transferase family, a/b domain
CT43_RS20650	PF02885	Glycosyl transferase family, helical bundle domain
CT43_RS20650	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
CT43_RS20655	PF01048	Phosphorylase superfamily
CT43_RS20660	PF01676	Metalloenzyme superfamily
CT43_RS20665	PF13115	YtkA-like
CT43_RS20670	PF00589	Phage integrase family
CT43_RS20670	PF02899	Phage integrase, N-terminal SAM-like domain
CT43_RS20675	PF14004	Protein of unknown function (DUF4227)
CT43_RS20680	PF01475	Ferric uptake regulator family
CT43_RS20685	PF01944	Stage II sporulation protein M
CT43_RS20695	PF00293	NUDIX domain
CT43_RS20700	PF13072	Mother cell inhibitor of FtsZ
CT43_RS20705	PF00248	Aldo/keto reductase family
CT43_RS20710	PF00248	Aldo/keto reductase family
CT43_RS20715	PF04229	GrpB protein
CT43_RS20715	PF13673	Acetyltransferase (GNAT) domain
CT43_RS20725	PF02872	5'-nucleotidase, C-terminal domain
CT43_RS20725	PF00746	LPXTG cell wall anchor motif
CT43_RS20725	PF00149	Calcineurin-like phosphoesterase
CT43_RS20725	PF00565	Staphylococcal nuclease homologue
CT43_RS20735	PF12146	Serine aminopeptidase, S33
CT43_RS20740	PF13726	Na+-H+ antiporter family
CT43_RS20740	PF03553	Na+/H+ antiporter family
CT43_RS20745	PF00356	Bacterial regulatory proteins, lacI family
CT43_RS20750	PF00583	Acetyltransferase (GNAT) family
CT43_RS20755	PF12146	Serine aminopeptidase, S33
CT43_RS20760	PF10827	Protein of unknown function (DUF2552) 
CT43_RS20770	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
CT43_RS20770	PF01872	RibD C-terminal domain
CT43_RS20775	PF00677	Lumazine binding domain
CT43_RS20780	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
CT43_RS20780	PF00925	GTP cyclohydrolase II
CT43_RS20785	PF00885	6,7-dimethyl-8-ribityllumazine synthase
CT43_RS20795	PF04055	Radical SAM superfamily
CT43_RS20795	PF06968	Biotin and Thiamin Synthesis associated domain
CT43_RS20800	PF13847	Methyltransferase domain
CT43_RS20805	PF08241	Methyltransferase domain
CT43_RS20805	PF12697	Alpha/beta hydrolase family
CT43_RS20810	PF00155	Aminotransferase class I and II
CT43_RS20820	PF00202	Aminotransferase class-III
CT43_RS20830	PF03553	Na+/H+ antiporter family
CT43_RS20835	PF00149	Calcineurin-like phosphoesterase
CT43_RS20835	PF02872	5'-nucleotidase, C-terminal domain
CT43_RS20845	PF01037	Lrp/AsnC ligand binding domain
CT43_RS20845	PF13404	AsnC-type helix-turn-helix domain
CT43_RS20885	PF14431	YwqJ-like deaminase
CT43_RS20885	PF14449	Pre-toxin TG
CT43_RS20885	PF04740	LXG domain of WXG superfamily
CT43_RS20890	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
CT43_RS20890	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CT43_RS20895	PF00202	Aminotransferase class-III
CT43_RS20900	PF00696	Amino acid kinase family
CT43_RS20905	PF01960	ArgJ family
CT43_RS20910	PF01118	Semialdehyde dehydrogenase, NAD binding domain
CT43_RS20910	PF02774	Semialdehyde dehydrogenase, dimerisation domain
CT43_RS20920	PF00106	short chain dehydrogenase
CT43_RS20925	PF00753	Metallo-beta-lactamase superfamily
CT43_RS20930	PF14748	Pyrroline-5-carboxylate reductase dimerisation
CT43_RS20930	PF03807	NADP oxidoreductase coenzyme F420-dependent
CT43_RS20935	PF03313	Serine dehydratase alpha chain
CT43_RS20940	PF03315	Serine dehydratase beta chain
CT43_RS20940	PF01842	ACT domain
CT43_RS20950	PF12706	Beta-lactamase superfamily domain
CT43_RS20950	PF00753	Metallo-beta-lactamase superfamily
CT43_RS20965	PF00689	Cation transporting ATPase, C-terminus
CT43_RS20965	PF00690	Cation transporter/ATPase, N-terminus
CT43_RS20970	PF02308	MgtC family
CT43_RS20975	PF11798	IMS family HHH motif
CT43_RS20975	PF00817	impB/mucB/samB family
CT43_RS20975	PF11799	impB/mucB/samB family C-terminal domain
CT43_RS20980	PF07687	Peptidase dimerisation domain
CT43_RS20980	PF01546	Peptidase family M20/M25/M40
CT43_RS20985	PF13302	Acetyltransferase (GNAT) domain
CT43_RS20995	PF03734	L,D-transpeptidase catalytic domain
CT43_RS21000	PF11728	Putative aromatic acid exporter C-terminal domain
CT43_RS21000	PF06081	Aromatic acid exporter family member 1
CT43_RS21005	PF00005	ABC transporter
CT43_RS21010	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS21015	PF00497	Bacterial extracellular solute-binding proteins, family 3
CT43_RS21020	PF06491	Disulphide isomerase
CT43_RS21025	PF11208	Protein of unknown function (DUF2992)
CT43_RS21030	PF09297	NADH pyrophosphatase zinc ribbon domain
CT43_RS21030	PF00293	NUDIX domain
CT43_RS21035	PF04239	Protein of unknown function (DUF421)
CT43_RS21040	PF01098	Cell cycle protein
CT43_RS21045	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CT43_RS21045	PF00364	Biotin-requiring enzyme
CT43_RS21045	PF02817	e3 binding domain
CT43_RS21050	PF02780	Transketolase, C-terminal domain
CT43_RS21050	PF02779	Transketolase, pyrimidine binding domain
CT43_RS21055	PF00676	Dehydrogenase E1 component
CT43_RS21060	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CT43_RS21060	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CT43_RS21065	PF00871	Acetokinase family
CT43_RS21070	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CT43_RS21070	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
CT43_RS21075	PF01515	Phosphate acetyl/butaryl transferase
CT43_RS21080	PF00989	PAS fold
CT43_RS21080	PF02954	Bacterial regulatory protein, Fis family
CT43_RS21080	PF00158	Sigma-54 interaction domain
CT43_RS21090	PF03009	Glycerophosphoryl diester phosphodiesterase family
CT43_RS21095	PF14174	YycC-like protein
CT43_RS21105	PF00072	Response regulator receiver domain
CT43_RS21105	PF08769	Sporulation initiation factor Spo0A C terminal
CT43_RS21110	PF05580	SpoIVB peptidase S55
CT43_RS21110	PF17820	PDZ domain
CT43_RS21120	PF02863	Arginine repressor, C-terminal domain
CT43_RS21120	PF01316	Arginine repressor, DNA binding domain
CT43_RS21125	PF01728	FtsJ-like methyltransferase
CT43_RS21125	PF01479	S4 domain
CT43_RS21130	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
CT43_RS21130	PF02779	Transketolase, pyrimidine binding domain
CT43_RS21130	PF02780	Transketolase, C-terminal domain
CT43_RS21135	PF00348	Polyprenyl synthetase
CT43_RS21140	PF02609	Exonuclease VII small subunit
CT43_RS21145	PF02601	Exonuclease VII, large subunit
CT43_RS21145	PF13742	OB-fold nucleic acid binding domain
CT43_RS21150	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
CT43_RS21150	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
CT43_RS21155	PF01029	NusB family
CT43_RS21160	PF03780	Asp23 family, cell envelope-related function
CT43_RS21165	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CT43_RS21165	PF02785	Biotin carboxylase C-terminal domain
CT43_RS21165	PF00289	Biotin carboxylase, N-terminal domain
CT43_RS21170	PF00364	Biotin-requiring enzyme
CT43_RS21185	PF09581	Stage III sporulation protein AF (Spore_III_AF)
CT43_RS21190	PF09546	Stage III sporulation protein AE (spore_III_AE)
CT43_RS21195	PF06686	Stage III sporulation protein AC/AD protein family
CT43_RS21200	PF06686	Stage III sporulation protein AC/AD protein family
CT43_RS21205	PF09548	Stage III sporulation protein AB (spore_III_AB)
CT43_RS21230	PF01132	Elongation factor P (EF-P) OB domain
CT43_RS21230	PF08207	Elongation factor P (EF-P) KOW-like domain
CT43_RS21230	PF09285	Elongation factor P, C-terminal
CT43_RS21235	PF00557	Metallopeptidase family M24
CT43_RS21235	PF01321	Creatinase/Prolidase N-terminal domain
CT43_RS21240	PF01220	Dehydroquinase class II
CT43_RS21245	PF11085	Conserved membrane protein YqhR
CT43_RS21250	PF07136	Protein of unknown function (DUF1385)
CT43_RS21260	PF13419	Haloacid dehalogenase-like hydrolase
CT43_RS21265	PF01325	Iron dependent repressor, N-terminal DNA binding domain
CT43_RS21265	PF02742	Iron dependent repressor, metal binding and dimerisation domain
CT43_RS21290	PF03099	Biotin/lipoate A/B protein ligase family
CT43_RS21295	PF00581	Rhodanese-like domain
CT43_RS21305	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
CT43_RS21305	PF00356	Bacterial regulatory proteins, lacI family
CT43_RS21315	PF00893	Small Multidrug Resistance protein
CT43_RS21320	PF00893	Small Multidrug Resistance protein
CT43_RS21350	PF00005	ABC transporter
CT43_RS21355	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS21370	PF02347	Glycine cleavage system P-protein
CT43_RS21375	PF02347	Glycine cleavage system P-protein
CT43_RS21380	PF01571	Aminomethyltransferase folate-binding domain
CT43_RS21380	PF08669	Glycine cleavage T-protein C-terminal barrel domain
CT43_RS21385	PF00176	SNF2 family N-terminal domain
CT43_RS21385	PF00271	Helicase conserved C-terminal domain
CT43_RS21390	PF11079	Bacterial protein YqhG of unknown function
CT43_RS21410	PF14038	YqzE-like protein
CT43_RS21415	PF01202	Shikimate kinase
CT43_RS21450	PF00482	Type II secretion system (T2SS), protein F
CT43_RS21465	PF11117	Protein of unknown function (DUF2626)
CT43_RS21470	PF00375	Sodium:dicarboxylate symporter family
CT43_RS21505	PF04101	Glycosyltransferase family 28 C-terminal domain
CT43_RS21505	PF03033	Glycosyltransferase family 28 N-terminal domain
CT43_RS21510	PF01385	Probable transposase
CT43_RS21510	PF07282	Putative transposase DNA-binding domain
CT43_RS21510	PF12323	Helix-turn-helix domain
CT43_RS21515	PF03033	Glycosyltransferase family 28 N-terminal domain
CT43_RS21515	PF04101	Glycosyltransferase family 28 C-terminal domain
CT43_RS21520	PF02607	B12 binding domain
CT43_RS21520	PF02310	B12 binding domain
CT43_RS21520	PF02965	Vitamin B12 dependent methionine synthase, activation domain
CT43_RS21520	PF02574	Homocysteine S-methyltransferase
CT43_RS21520	PF00809	Pterin binding enzyme
CT43_RS21525	PF02574	Homocysteine S-methyltransferase
CT43_RS21525	PF02219	Methylenetetrahydrofolate reductase
CT43_RS21530	PF01053	Cys/Met metabolism PLP-dependent enzyme
CT43_RS21535	PF01053	Cys/Met metabolism PLP-dependent enzyme
CT43_RS21545	PF01022	Bacterial regulatory protein, arsR family
CT43_RS21555	PF00753	Metallo-beta-lactamase superfamily
CT43_RS21565	PF00480	ROK family
CT43_RS21570	PF06014	Bacterial protein of unknown function (DUF910)
CT43_RS21575	PF01812	5-formyltetrahydrofolate cyclo-ligase family
CT43_RS21580	PF00471	Ribosomal protein L33
CT43_RS21585	PF00483	Nucleotidyl transferase
CT43_RS21590	PF01895	PhoU domain
CT43_RS21595	PF00005	ABC transporter
CT43_RS21600	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS21605	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS21610	PF12849	PBP superfamily domain
CT43_RS21615	PF00905	Penicillin binding protein transpeptidase domain
CT43_RS21615	PF03717	Penicillin-binding Protein dimerisation domain
CT43_RS21620	PF07690	Major Facilitator Superfamily
CT43_RS21625	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
CT43_RS21625	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
CT43_RS21635	PF06691	Protein of unknown function (DUF1189)
CT43_RS21645	PF04551	GcpE protein
CT43_RS21650	PF01475	Ferric uptake regulator family
CT43_RS21655	PF00950	ABC 3 transport family
CT43_RS21660	PF00005	ABC transporter
CT43_RS21665	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_RS21665	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CT43_RS21670	PF11116	Protein of unknown function (DUF2624)
CT43_RS21675	PF01261	Xylose isomerase-like TIM barrel
CT43_RS21690	PF02401	LytB protein
CT43_RS21695	PF01784	NIF3 (NGG1p interacting factor 3)
CT43_RS21700	PF04816	tRNA (adenine(22)-N(1))-methyltransferase
CT43_RS21705	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
CT43_RS21710	PF04545	Sigma-70, region 4
CT43_RS21710	PF00140	Sigma-70 factor, region 1.2
CT43_RS21710	PF04539	Sigma-70 region 3
CT43_RS21710	PF04542	Sigma-70 region 2 
CT43_RS21710	PF03979	Sigma-70 factor, region 1.1
CT43_RS21715	PF08275	DNA primase catalytic core, N-terminal domain
CT43_RS21715	PF10410	DnaB-helicase binding domain of primase
CT43_RS21715	PF01807	CHC2 zinc finger
CT43_RS21720	PF03618	Kinase/pyrophosphorylase
CT43_RS21725	PF08279	HTH domain
CT43_RS21725	PF00571	CBS domain
CT43_RS21730	PF11967	Recombination protein O N terminal
CT43_RS21730	PF02565	Recombination protein O C terminal
CT43_RS21740	PF07650	KH domain
CT43_RS21740	PF01926	50S ribosome-binding GTPase
CT43_RS21745	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
CT43_RS21750	PF01219	Prokaryotic diacylglycerol kinase
CT43_RS21755	PF02130	Uncharacterized protein family UPF0054
CT43_RS21760	PF07697	7TM-HD extracellular
CT43_RS21760	PF07698	7TM receptor with intracellular HD hydrolase
CT43_RS21760	PF01966	HD domain
CT43_RS21765	PF02562	PhoH-like protein
CT43_RS21770	PF06898	Putative stage IV sporulation protein YqfD
CT43_RS21775	PF07873	YabP family
CT43_RS21785	PF09424	Yqey-like protein
CT43_RS21790	PF01165	Ribosomal protein S21
CT43_RS21795	PF01938	TRAM domain
CT43_RS21795	PF04055	Radical SAM superfamily
CT43_RS21795	PF00919	Uncharacterized protein family UPF0004
CT43_RS21800	PF04452	RNA methyltransferase
CT43_RS21810	PF01556	DnaJ C terminal domain
CT43_RS21810	PF00226	DnaJ domain
CT43_RS21810	PF00684	DnaJ central domain
CT43_RS21815	PF00012	Hsp70 protein
CT43_RS21820	PF01025	GrpE
CT43_RS21825	PF01628	HrcA protein C terminal domain
CT43_RS21830	PF04055	Radical SAM superfamily
CT43_RS21830	PF06969	HemN C-terminal domain
CT43_RS21835	PF01638	HxlR-like helix-turn-helix
CT43_RS21840	PF00679	Elongation factor G C-terminus
CT43_RS21840	PF03144	Elongation factor Tu domain 2
CT43_RS21840	PF00009	Elongation factor Tu GTP binding domain
CT43_RS21840	PF06421	GTP-binding protein LepA C-terminus
CT43_RS21850	PF03418	Germination protease
CT43_RS21855	PF01649	Ribosomal protein S20
CT43_RS21860	PF06144	DNA polymerase III, delta subunit
CT43_RS21865	PF14141	YqzM-like protein
CT43_RS21870	PF03772	Competence protein
CT43_RS21870	PF13567	Domain of unknown function (DUF4131)
CT43_RS21870	PF00753	Metallo-beta-lactamase superfamily
CT43_RS21875	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
CT43_RS21880	PF10531	SLBB domain
CT43_RS21885	PF03807	NADP oxidoreductase coenzyme F420-dependent
CT43_RS21885	PF14748	Pyrroline-5-carboxylate reductase dimerisation
CT43_RS21890	PF13649	Methyltransferase domain
CT43_RS21900	PF01966	HD domain
CT43_RS21905	PF01467	Cytidylyltransferase-like
CT43_RS21910	PF01985	CRS1 / YhbY (CRM) domain
CT43_RS21915	PF01488	Shikimate / quinate 5-dehydrogenase
CT43_RS21915	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
CT43_RS21915	PF08501	Shikimate dehydrogenase substrate binding domain
CT43_RS21920	PF01926	50S ribosome-binding GTPase
CT43_RS21935	PF02666	Phosphatidylserine decarboxylase
CT43_RS21940	PF04545	Sigma-70, region 4
CT43_RS21940	PF04542	Sigma-70 region 2 
CT43_RS21950	PF16244	Domain of unknown function (DUF4901)
CT43_RS21955	PF00471	Ribosomal protein L33
CT43_RS21960	PF00881	Nitroreductase family
CT43_RS21965	PF04607	Region found in RelA / SpoT proteins
CT43_RS21975	PF00245	Alkaline phosphatase
CT43_RS21980	PF00583	Acetyltransferase (GNAT) family
CT43_RS21985	PF00561	alpha/beta hydrolase fold
CT43_RS21985	PF08386	TAP-like protein
CT43_RS22020	PF00082	Subtilase family
CT43_RS22020	PF05922	Peptidase inhibitor I9
CT43_RS22020	PF02225	PA domain
CT43_RS22020	PF13860	FlgD Ig-like domain
CT43_RS22025	PF00351	Biopterin-dependent aromatic amino acid hydroxylase
CT43_RS22040	PF07681	DoxX
CT43_RS22070	PF00005	ABC transporter
CT43_RS22075	PF01032	FecCD transport family
CT43_RS22080	PF01497	Periplasmic binding protein
CT43_RS22085	PF14143	YrhC-like protein
CT43_RS22090	PF00171	Aldehyde dehydrogenase family
CT43_RS22090	PF00465	Iron-containing alcohol dehydrogenase 
CT43_RS22095	PF01053	Cys/Met metabolism PLP-dependent enzyme
CT43_RS22100	PF00291	Pyridoxal-phosphate dependent enzyme
CT43_RS22105	PF01048	Phosphorylase superfamily
CT43_RS22110	PF08241	Methyltransferase domain
CT43_RS22125	PF03717	Penicillin-binding Protein dimerisation domain
CT43_RS22125	PF00905	Penicillin binding protein transpeptidase domain
CT43_RS22130	PF03449	Transcription elongation factor, N-terminal
CT43_RS22130	PF01272	Transcription elongation factor, GreA/GreB, C-term
CT43_RS22135	PF00485	Phosphoribulokinase / Uridine kinase family
CT43_RS22140	PF16325	Peptidase family U32 C-terminal domain
CT43_RS22140	PF01136	Peptidase family U32
CT43_RS22145	PF01136	Peptidase family U32
CT43_RS22150	PF01596	O-methyltransferase
CT43_RS22155	PF02618	YceG-like family
CT43_RS22160	PF06949	Protein of unknown function (DUF1292)
CT43_RS22165	PF03652	Holliday junction resolvase
CT43_RS22170	PF06135	IreB regulatory phosphoprotein
CT43_RS22175	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CT43_RS22175	PF01411	tRNA synthetases class II (A)
CT43_RS22175	PF02272	DHHA1 domain
CT43_RS22185	PF01594	AI-2E family transporter
CT43_RS22205	PF14490	Helix-hairpin-helix containing domain
CT43_RS22205	PF13538	UvrD-like helicase C-terminal domain
CT43_RS22205	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
CT43_RS22220	PF00266	Aminotransferase class-V
CT43_RS22225	PF02082	Transcriptional regulator
CT43_RS22230	PF12002	MgsA AAA+ ATPase C terminal
CT43_RS22230	PF05496	Holliday junction DNA helicase RuvB P-loop domain
CT43_RS22230	PF16193	AAA C-terminal domain
CT43_RS22240	PF00899	ThiF family
CT43_RS22245	PF00152	tRNA synthetases class II (D, K and N) 
CT43_RS22245	PF01336	OB-fold nucleic acid binding domain
CT43_RS22245	PF02938	GAD domain
CT43_RS22250	PF03129	Anticodon binding domain
CT43_RS22250	PF13393	Histidyl-tRNA synthetase
CT43_RS22260	PF02580	D-Tyr-tRNA(Tyr) deacylase
CT43_RS22265	PF04607	Region found in RelA / SpoT proteins
CT43_RS22265	PF02824	TGS domain
CT43_RS22265	PF13291	ACT domain
CT43_RS22270	PF00156	Phosphoribosyl transferase domain
CT43_RS22275	PF17768	RecJ OB domain
CT43_RS22275	PF01368	DHH family
CT43_RS22275	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
CT43_RS22275	PF02272	DHHA1 domain
CT43_RS22280	PF01545	Cation efflux family
CT43_RS22280	PF16916	Dimerisation domain of Zinc Transporter
CT43_RS22285	PF02355	Protein export membrane protein
CT43_RS22285	PF07549	SecD/SecF GG Motif
CT43_RS22290	PF13797	Post-transcriptional regulator
CT43_RS22295	PF14667	Polysaccharide biosynthesis C-terminal domain
CT43_RS22295	PF01943	Polysaccharide biosynthesis protein
CT43_RS22300	PF04239	Protein of unknown function (DUF421)
CT43_RS22310	PF02699	Preprotein translocase subunit
CT43_RS22315	PF01702	Queuine tRNA-ribosyltransferase
CT43_RS22320	PF02547	Queuosine biosynthesis protein
CT43_RS22325	PF11146	Protein of unknown function (DUF2905)
CT43_RS22330	PF17864	RuvB AAA lid domain
CT43_RS22330	PF05491	RuvB C-terminal winged helix domain
CT43_RS22330	PF05496	Holliday junction DNA helicase RuvB P-loop domain
CT43_RS22335	PF07499	RuvA, C-terminal domain
CT43_RS22335	PF01330	RuvA N terminal domain
CT43_RS22340	PF01497	Periplasmic binding protein
CT43_RS22360	PF01476	LysM domain
CT43_RS22365	PF02445	Quinolinate synthetase A protein
CT43_RS22370	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
CT43_RS22370	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
CT43_RS22375	PF00890	FAD binding domain
CT43_RS22375	PF02910	Fumarate reductase flavoprotein C-term
CT43_RS22380	PF00266	Aminotransferase class-V
CT43_RS22385	PF02829	3H domain
CT43_RS22385	PF08279	HTH domain
CT43_RS22390	PF03473	MOSC domain
CT43_RS22390	PF03475	3-alpha domain
CT43_RS22395	PF01842	ACT domain
CT43_RS22395	PF00800	Prephenate dehydratase
CT43_RS22400	PF02687	FtsX-like permease family
CT43_RS22405	PF02687	FtsX-like permease family
CT43_RS22410	PF00005	ABC transporter
CT43_RS22415	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS22420	PF00072	Response regulator receiver domain
CT43_RS22420	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS22425	PF01926	50S ribosome-binding GTPase
CT43_RS22425	PF01018	GTP1/OBG
CT43_RS22425	PF09269	Domain of unknown function (DUF1967)
CT43_RS22430	PF14682	Sporulation initiation phospho-transferase B, C-terminal
CT43_RS22430	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
CT43_RS22435	PF01016	Ribosomal L27 protein
CT43_RS22440	PF04327	Cysteine protease Prp
CT43_RS22445	PF00829	Ribosomal prokaryotic L21 protein
CT43_RS22450	PF10150	Ribonuclease E/G family
CT43_RS22450	PF00575	S1 RNA binding domain
CT43_RS22455	PF02163	Peptidase family M50
CT43_RS22460	PF01551	Peptidase family M23
CT43_RS22465	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
CT43_RS22470	PF03775	Septum formation inhibitor MinC, C-terminal domain
CT43_RS22480	PF04085	rod shape-determining protein MreC
CT43_RS22490	PF04002	RadC-like JAB domain
CT43_RS22495	PF02545	Maf-like protein
CT43_RS22505	PF02875	Mur ligase family, glutamate ligase domain
CT43_RS22505	PF08245	Mur ligase middle domain
CT43_RS22510	PF00133	tRNA synthetases class I (I, L, M and V)
CT43_RS22510	PF10458	Valyl tRNA synthetase tRNA binding arm
CT43_RS22510	PF08264	Anticodon-binding domain of tRNA
CT43_RS22520	PF01476	LysM domain
CT43_RS22525	PF00202	Aminotransferase class-III
CT43_RS22530	PF00490	Delta-aminolevulinic acid dehydratase
CT43_RS22535	PF02602	Uroporphyrinogen-III synthase HemD
CT43_RS22540	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
CT43_RS22540	PF03900	Porphobilinogen deaminase, C-terminal domain
CT43_RS22545	PF01578	Cytochrome C assembly protein
CT43_RS22550	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
CT43_RS22550	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
CT43_RS22550	PF01488	Shikimate / quinate 5-dehydrogenase
CT43_RS22555	PF01047	MarR family
CT43_RS22560	PF02566	OsmC-like protein
CT43_RS22565	PF01926	50S ribosome-binding GTPase
CT43_RS22570	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
CT43_RS22570	PF05362	Lon protease (S16) C-terminal proteolytic domain
CT43_RS22570	PF00004	ATPase family associated with various cellular activities (AAA)
CT43_RS22575	PF00004	ATPase family associated with various cellular activities (AAA)
CT43_RS22575	PF05362	Lon protease (S16) C-terminal proteolytic domain
CT43_RS22580	PF07724	AAA domain (Cdc48 subfamily)
CT43_RS22580	PF06689	ClpX C4-type zinc finger
CT43_RS22580	PF10431	C-terminal, D2-small domain, of ClpB protein 
CT43_RS22585	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
CT43_RS22585	PF05697	Bacterial trigger factor protein (TF)
CT43_RS22585	PF05698	Bacterial trigger factor protein (TF) C-terminus
CT43_RS22595	PF11724	YvbH-like oligomerisation region
CT43_RS22595	PF08000	Bacterial PH domain
CT43_RS22660	PF00239	Resolvase, N terminal domain
CT43_RS22660	PF02796	Helix-turn-helix domain of resolvase
CT43_RS22670	PF07261	Replication initiation and membrane attachment
CT43_RS22695	PF00589	Phage integrase family
CT43_RS22695	PF02899	Phage integrase, N-terminal SAM-like domain
CT43_RS22710	PF12850	Calcineurin-like phosphoesterase superfamily domain
CT43_RS22715	PF01725	Ham1 family
CT43_RS22720	PF01138	3' exoribonuclease family, domain 1
CT43_RS22720	PF03725	3' exoribonuclease family, domain 2
CT43_RS22725	PF10646	Sporulation and spore germination
CT43_RS22730	PF01177	Asp/Glu/Hydantoin racemase
CT43_RS22735	PF07690	Major Facilitator Superfamily
CT43_RS22745	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS22755	PF00196	Bacterial regulatory proteins, luxR family
CT43_RS22760	PF00860	Permease family
CT43_RS22765	PF07969	Amidohydrolase family
CT43_RS22770	PF04024	PspC domain
CT43_RS22775	PF01381	Helix-turn-helix
CT43_RS22775	PF07883	Cupin domain
CT43_RS22780	PF13536	Putative multidrug resistance efflux transporter
CT43_RS22785	PF00230	Major intrinsic protein
CT43_RS22790	PF02082	Transcriptional regulator
CT43_RS22800	PF00005	ABC transporter
CT43_RS22800	PF13732	Domain of unknown function (DUF4162)
CT43_RS22805	PF03767	HAD superfamily, subfamily IIIB (Acid phosphatase)
CT43_RS22810	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
CT43_RS22810	PF00691	OmpA family
CT43_RS22815	PF01618	MotA/TolQ/ExbB proton channel family
CT43_RS22820	PF02557	D-alanyl-D-alanine carboxypeptidase
CT43_RS22825	PF03061	Thioesterase superfamily
CT43_RS22830	PF13085	2Fe-2S iron-sulfur cluster binding domain
CT43_RS22830	PF13183	4Fe-4S dicluster domain
CT43_RS22835	PF02910	Fumarate reductase flavoprotein C-term
CT43_RS22835	PF00890	FAD binding domain
CT43_RS22840	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
CT43_RS22845	PF10702	Protein of unknown function (DUF2507)
CT43_RS22850	PF02151	UvrB/uvrC motif
CT43_RS22850	PF08459	UvrC Helix-hairpin-helix N-terminal
CT43_RS22850	PF01541	GIY-YIG catalytic domain
CT43_RS22855	PF00085	Thioredoxin
CT43_RS22860	PF01012	Electron transfer flavoprotein domain
CT43_RS22860	PF00766	Electron transfer flavoprotein FAD-binding domain
CT43_RS22865	PF01012	Electron transfer flavoprotein domain
CT43_RS22870	PF00378	Enoyl-CoA hydratase/isomerase
CT43_RS22875	PF08359	YsiA-like protein, C-terminal region
CT43_RS22875	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS22880	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS22880	PF00501	AMP-binding enzyme
CT43_RS22890	PF01497	Periplasmic binding protein
CT43_RS22895	PF01032	FecCD transport family
CT43_RS22905	PF05163	DinB family
CT43_RS22930	PF00005	ABC transporter
CT43_RS22935	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS22935	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS22940	PF00072	Response regulator receiver domain
CT43_RS22940	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS22950	PF09962	Uncharacterized conserved protein (DUF2196)
CT43_RS22955	PF10672	S-adenosylmethionine-dependent methyltransferase
CT43_RS22955	PF17785	PUA-like domain
CT43_RS22960	PF03992	Antibiotic biosynthesis monooxygenase
CT43_RS22965	PF04203	Sortase domain
CT43_RS22970	PF00005	ABC transporter
CT43_RS22975	PF01032	FecCD transport family
CT43_RS22980	PF01497	Periplasmic binding protein
CT43_RS22985	PF05031	Iron Transport-associated domain 
CT43_RS22995	PF05031	Iron Transport-associated domain 
CT43_RS23000	PF05525	Branched-chain amino acid transport protein
CT43_RS23005	PF01479	S4 domain
CT43_RS23005	PF00849	RNA pseudouridylate synthase
CT43_RS23010	PF00488	MutS domain V
CT43_RS23010	PF01713	Smr domain
CT43_RS23015	PF14716	Helix-hairpin-helix domain
CT43_RS23015	PF02811	PHP domain
CT43_RS23015	PF14791	DNA polymerase beta thumb 
CT43_RS23020	PF02674	Colicin V production protein
CT43_RS23025	PF05164	Cell division protein ZapA
CT43_RS23030	PF11858	Domain of unknown function (DUF3378)
CT43_RS23030	PF01351	Ribonuclease HII
CT43_RS23045	PF01336	OB-fold nucleic acid binding domain
CT43_RS23045	PF00152	tRNA synthetases class II (D, K and N) 
CT43_RS23050	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
CT43_RS23050	PF03483	B3/4 domain
CT43_RS23050	PF03147	Ferredoxin-fold anticodon binding domain
CT43_RS23050	PF03484	tRNA synthetase B5 domain
CT43_RS23050	PF01588	Putative tRNA binding domain
CT43_RS23055	PF01409	tRNA synthetases class II core domain (F)
CT43_RS23055	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
CT43_RS23060	PF00588	SpoU rRNA Methylase family
CT43_RS23060	PF08032	RNA 2'-O ribose methyltransferase substrate binding
CT43_RS23065	PF14098	Small, acid-soluble spore protein I
CT43_RS23070	PF01966	HD domain
CT43_RS23090	PF07690	Major Facilitator Superfamily
CT43_RS23100	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS23100	PF16859	Tetracyclin repressor-like, C-terminal domain
CT43_RS23105	PF05343	M42 glutamyl aminopeptidase
CT43_RS23115	PF00453	Ribosomal protein L20
CT43_RS23120	PF01632	Ribosomal protein L35
CT43_RS23125	PF05198	Translation initiation factor IF-3, N-terminal domain
CT43_RS23125	PF00707	Translation initiation factor IF-3, C-terminal domain
CT43_RS23130	PF03129	Anticodon binding domain
CT43_RS23130	PF02824	TGS domain
CT43_RS23130	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CT43_RS23130	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CT43_RS23135	PF08812	YtxC-like family
CT43_RS23145	PF07319	Primosomal protein DnaI N-terminus
CT43_RS23145	PF01695	IstB-like ATP binding protein
CT43_RS23150	PF07261	Replication initiation and membrane attachment
CT43_RS23155	PF03477	ATP cone domain
CT43_RS23160	PF02675	S-adenosylmethionine decarboxylase 
CT43_RS23165	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
CT43_RS23165	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CT43_RS23170	PF01121	Dephospho-CoA kinase
CT43_RS23175	PF02659	Putative manganese efflux pump
CT43_RS23180	PF06827	Zinc finger found in FPG and IleRS
CT43_RS23180	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
CT43_RS23180	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
CT43_RS23185	PF01367	5'-3' exonuclease, C-terminal SAM fold
CT43_RS23185	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
CT43_RS23185	PF00476	DNA polymerase family A
CT43_RS23190	PF00989	PAS fold
CT43_RS23190	PF16736	Single Cache-like 
CT43_RS23190	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS23190	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS23195	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS23195	PF00072	Response regulator receiver domain
CT43_RS23210	PF00056	lactate/malate dehydrogenase, NAD binding domain
CT43_RS23210	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CT43_RS23215	PF00180	Isocitrate/isopropylmalate dehydrogenase
CT43_RS23220	PF00285	Citrate synthase, C-terminal domain
CT43_RS23225	PF04284	Protein of unknown function (DUF441)
CT43_RS23230	PF01594	AI-2E family transporter
CT43_RS23235	PF04186	FxsA cytoplasmic membrane protein 
CT43_RS23240	PF00391	PEP-utilising enzyme, mobile domain
CT43_RS23240	PF02887	Pyruvate kinase, alpha/beta domain
CT43_RS23240	PF00224	Pyruvate kinase, barrel domain
CT43_RS23245	PF00365	Phosphofructokinase
CT43_RS23250	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
CT43_RS23255	PF17848	Acetyl-coA carboxylase zinc finger domain
CT43_RS23255	PF01039	Carboxyl transferase domain
CT43_RS23260	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS23265	PF00390	Malic enzyme, N-terminal domain
CT43_RS23265	PF03949	Malic enzyme, NAD binding domain
CT43_RS23270	PF01336	OB-fold nucleic acid binding domain
CT43_RS23270	PF02811	PHP domain
CT43_RS23270	PF07733	Bacterial DNA polymerase III alpha NTPase domain
CT43_RS23270	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
CT43_RS23270	PF14579	Helix-hairpin-helix motif
CT43_RS23275	PF14034	Sporulation protein YtrH
CT43_RS23285	PF01368	DHH family
CT43_RS23285	PF02272	DHHA1 domain
CT43_RS23290	PF14007	YtpI-like protein
CT43_RS23300	PF07085	DRTGG domain
CT43_RS23300	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS23300	PF03061	Thioesterase superfamily
CT43_RS23300	PF00571	CBS domain
CT43_RS23315	PF01321	Creatinase/Prolidase N-terminal domain
CT43_RS23315	PF00557	Metallopeptidase family M24
CT43_RS23350	PF12746	GNAT acetyltransferase
CT43_RS23355	PF07883	Cupin domain
CT43_RS23365	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
CT43_RS23365	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
CT43_RS23375	PF00582	Universal stress protein family
CT43_RS23395	PF00206	Lyase
CT43_RS23395	PF14698	Argininosuccinate lyase C-terminal
CT43_RS23400	PF00764	Arginosuccinate synthase
CT43_RS23415	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_RS23415	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CT43_RS23420	PF12787	EcsC protein family
CT43_RS23435	PF00871	Acetokinase family
CT43_RS23440	PF02384	N-6 DNA Methylase
CT43_RS23445	PF08534	Redoxin
CT43_RS23450	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
CT43_RS23460	PF01513	ATP-NAD kinase
CT43_RS23465	PF07969	Amidohydrolase family
CT43_RS23475	PF00501	AMP-binding enzyme
CT43_RS23475	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS23480	PF00269	Small, acid-soluble spore proteins, alpha/beta type
CT43_RS23485	PF02568	Thiamine biosynthesis protein (ThiI)
CT43_RS23485	PF02926	THUMP domain
CT43_RS23490	PF00266	Aminotransferase class-V
CT43_RS23495	PF06160	Septation ring formation regulator, EzrA 
CT43_RS23500	PF03466	LysR substrate binding domain
CT43_RS23500	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CT43_RS23505	PF00892	EamA-like transporter family
CT43_RS23510	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS23515	PF13185	GAF domain
CT43_RS23520	PF01053	Cys/Met metabolism PLP-dependent enzyme
CT43_RS23525	PF00163	Ribosomal protein S4/S9 N-terminal domain
CT43_RS23525	PF01479	S4 domain
CT43_RS23540	PF00579	tRNA synthetases class I (W and Y)
CT43_RS23540	PF01479	S4 domain
CT43_RS23550	PF04542	Sigma-70 region 2 
CT43_RS23550	PF08281	Sigma-70, region 4
CT43_RS23560	PF14602	Hexapeptide repeat of succinyl-transferase
CT43_RS23560	PF12464	Maltose acetyltransferase 
CT43_RS23565	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS23565	PF00501	AMP-binding enzyme
CT43_RS23570	PF00583	Acetyltransferase (GNAT) family
CT43_RS23575	PF00571	CBS domain
CT43_RS23580	PF00850	Histone deacetylase domain
CT43_RS23585	PF00561	alpha/beta hydrolase fold
CT43_RS23595	PF00072	Response regulator receiver domain
CT43_RS23595	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS23605	PF12796	Ankyrin repeats (3 copies)
CT43_RS23610	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CT43_RS23615	PF01741	Large-conductance mechanosensitive channel, MscL
CT43_RS23635	PF00356	Bacterial regulatory proteins, lacI family
CT43_RS23640	PF00793	DAHP synthetase I family
CT43_RS23640	PF01817	Chorismate mutase type II
CT43_RS23645	PF00793	DAHP synthetase I family
CT43_RS23645	PF01817	Chorismate mutase type II
CT43_RS23650	PF01817	Chorismate mutase type II
CT43_RS23650	PF00793	DAHP synthetase I family
CT43_RS23655	PF07537	CamS sex pheromone cAM373 precursor
CT43_RS23660	PF11009	Protein of unknown function (DUF2847)
CT43_RS23670	PF02073	Thermophilic metalloprotease (M29)
CT43_RS23685	PF13302	Acetyltransferase (GNAT) domain
CT43_RS23690	PF00892	EamA-like transporter family
CT43_RS23695	PF13411	MerR HTH family regulatory protein
CT43_RS23700	PF08245	Mur ligase middle domain
CT43_RS23700	PF01225	Mur ligase family, catalytic domain
CT43_RS23700	PF02875	Mur ligase family, glutamate ligase domain
CT43_RS23710	PF17854	FtsK alpha domain
CT43_RS23710	PF01580	FtsK/SpoIIIE family
CT43_RS23710	PF09397	Ftsk gamma domain
CT43_RS23715	PF01520	N-acetylmuramoyl-L-alanine amidase
CT43_RS23715	PF08239	Bacterial SH3 domain
CT43_RS23725	PF01588	Putative tRNA binding domain
CT43_RS23725	PF14794	Domain of unknown function (DUF4479)
CT43_RS23730	PF07285	Protein of unknown function (DUF1444)
CT43_RS23735	PF00085	Thioredoxin
CT43_RS23740	PF01931	Protein of unknown function DUF84
CT43_RS23745	PF05343	M42 glutamyl aminopeptidase
CT43_RS23755	PF00753	Metallo-beta-lactamase superfamily
CT43_RS23760	PF02390	Putative methyltransferase 
CT43_RS23765	PF14165	YtzH-like protein
CT43_RS23770	PF01636	Phosphotransferase enzyme family
CT43_RS23775	PF17999	Pullulanase N1-terminal domain
CT43_RS23775	PF00128	Alpha amylase, catalytic domain
CT43_RS23775	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
CT43_RS23780	PF02834	LigT like Phosphoesterase
CT43_RS23785	PF01546	Peptidase family M20/M25/M40
CT43_RS23790	PF08220	DeoR-like helix-turn-helix domain
CT43_RS23795	PF01479	S4 domain
CT43_RS23795	PF00849	RNA pseudouridylate synthase
CT43_RS23800	PF01943	Polysaccharide biosynthesis protein
CT43_RS23800	PF14667	Polysaccharide biosynthesis C-terminal domain
CT43_RS23810	PF07690	Major Facilitator Superfamily
CT43_RS23815	PF01022	Bacterial regulatory protein, arsR family
CT43_RS23820	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
CT43_RS23830	PF10957	Sporulation protein Cse60 
CT43_RS23840	PF02559	CarD-like/TRCF domain
CT43_RS23850	PF06800	Sugar transport protein
CT43_RS23865	PF02391	MoaE protein
CT43_RS23870	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
CT43_RS23875	PF03453	MoeA N-terminal region (domain I and II)
CT43_RS23875	PF03454	MoeA C-terminal region (domain IV)
CT43_RS23875	PF00994	Probable molybdopterin binding domain
CT43_RS23880	PF01967	MoaC family
CT43_RS23885	PF00899	ThiF family
CT43_RS23890	PF04055	Radical SAM superfamily
CT43_RS23890	PF06463	Molybdenum Cofactor Synthesis C
CT43_RS23910	PF00581	Rhodanese-like domain
CT43_RS23920	PF00561	alpha/beta hydrolase fold
CT43_RS23925	PF03323	Bacillus/Clostridium GerA spore germination protein
CT43_RS23930	PF03845	Spore germination protein
CT43_RS23955	PF08264	Anticodon-binding domain of tRNA
CT43_RS23955	PF00133	tRNA synthetases class I (I, L, M and V)
CT43_RS23955	PF13603	Leucyl-tRNA synthetase, Domain 2
CT43_RS23955	PF09334	tRNA synthetases class I (M)
CT43_RS23960	PF07690	Major Facilitator Superfamily
CT43_RS23965	PF00999	Sodium/hydrogen exchanger family
CT43_RS23970	PF02080	TrkA-C domain
CT43_RS23975	PF00589	Phage integrase family
CT43_RS23985	PF00005	ABC transporter
CT43_RS23990	PF07786	Protein of unknown function (DUF1624)
CT43_RS23990	PF04235	Protein of unknown function (DUF418)
CT43_RS23995	PF07282	Putative transposase DNA-binding domain
CT43_RS23995	PF01385	Probable transposase
CT43_RS23995	PF12323	Helix-turn-helix domain
CT43_RS24010	PF10732	Protein of unknown function (DUF2524)
CT43_RS24015	PF04055	Radical SAM superfamily
CT43_RS24015	PF16199	Radical_SAM C-terminal domain
CT43_RS24020	PF06962	Putative rRNA methylase
CT43_RS24025	PF00005	ABC transporter
CT43_RS24025	PF13732	Domain of unknown function (DUF4162)
CT43_RS24035	PF01177	Asp/Glu/Hydantoin racemase
CT43_RS24050	PF10776	Protein of unknown function (DUF2600)
CT43_RS24055	PF12146	Serine aminopeptidase, S33
CT43_RS24060	PF00132	Bacterial transferase hexapeptide (six repeats)
CT43_RS24065	PF01569	PAP2 superfamily
CT43_RS24070	PF00534	Glycosyl transferases group 1
CT43_RS24070	PF13439	Glycosyltransferase Family 4
CT43_RS24075	PF12804	MobA-like NTP transferase domain
CT43_RS24080	PF00994	Probable molybdopterin binding domain
CT43_RS24090	PF02773	S-adenosylmethionine synthetase, C-terminal domain
CT43_RS24090	PF02772	S-adenosylmethionine synthetase, central domain
CT43_RS24090	PF00438	S-adenosylmethionine synthetase, N-terminal domain
CT43_RS24095	PF01293	Phosphoenolpyruvate carboxykinase
CT43_RS24150	PF13188	PAS domain
CT43_RS24150	PF13426	PAS domain
CT43_RS24150	PF00989	PAS fold
CT43_RS24150	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS24150	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS24155	PF02743	Cache domain
CT43_RS24155	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS24155	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS24160	PF00199	Catalase
CT43_RS24160	PF18011	C-terminal domain found in long catalases
CT43_RS24160	PF06628	Catalase-related immune-responsive
CT43_RS24165	PF08386	TAP-like protein
CT43_RS24165	PF00561	alpha/beta hydrolase fold
CT43_RS24170	PF00884	Sulfatase
CT43_RS24195	PF00005	ABC transporter
CT43_RS24200	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS24215	PF13419	Haloacid dehalogenase-like hydrolase
CT43_RS24225	PF00293	NUDIX domain
CT43_RS24255	PF00893	Small Multidrug Resistance protein
CT43_RS24260	PF00893	Small Multidrug Resistance protein
CT43_RS24265	PF00376	MerR family regulatory protein
CT43_RS24265	PF09278	MerR, DNA binding
CT43_RS24270	PF02664	S-Ribosylhomocysteinase (LuxS)
CT43_RS24275	PF01809	Putative membrane protein insertion efficiency factor
CT43_RS24280	PF00484	Carbonic anhydrase
CT43_RS24285	PF01654	Cytochrome bd terminal oxidase subunit I
CT43_RS24290	PF02322	Cytochrome bd terminal oxidase subunit II
CT43_RS24295	PF10676	Spore germination protein gerPA/gerPF
CT43_RS24305	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_RS24305	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CT43_RS24325	PF04012	PspA/IM30 family
CT43_RS24340	PF07670	Nucleoside recognition
CT43_RS24340	PF07664	Ferrous iron transport protein B C terminus
CT43_RS24340	PF02421	Ferrous iron transport protein B
CT43_RS24340	PF17910	FeoB cytosolic helical domain
CT43_RS24350	PF09515	Thiamine transporter protein (Thia_YuaJ)
CT43_RS24355	PF00672	HAMP domain
CT43_RS24355	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS24355	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS24360	PF00072	Response regulator receiver domain
CT43_RS24360	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS24385	PF00156	Phosphoribosyl transferase domain
CT43_RS24390	PF00781	Diacylglycerol kinase catalytic domain
CT43_RS24400	PF02687	FtsX-like permease family
CT43_RS24405	PF00005	ABC transporter
CT43_RS24420	PF09335	SNARE associated Golgi protein
CT43_RS24425	PF00398	Ribosomal RNA adenine dimethylase
CT43_RS24430	PF02687	FtsX-like permease family
CT43_RS24435	PF00005	ABC transporter
CT43_RS24440	PF06445	GyrI-like small molecule binding domain
CT43_RS24440	PF12833	Helix-turn-helix domain
CT43_RS24450	PF13630	SdpI/YhfL protein family
CT43_RS24450	PF07853	Protein of unknown function (DUF1648)
CT43_RS24455	PF01022	Bacterial regulatory protein, arsR family
CT43_RS24460	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS24460	PF00072	Response regulator receiver domain
CT43_RS24465	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS24470	PF02687	FtsX-like permease family
CT43_RS24475	PF02687	FtsX-like permease family
CT43_RS24480	PF00005	ABC transporter
CT43_RS24485	PF02687	FtsX-like permease family
CT43_RS24495	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS24495	PF13977	BetI-type transcriptional repressor, C-terminal
CT43_RS24505	PF02447	GntP family permease
CT43_RS24510	PF07702	UTRA domain
CT43_RS24510	PF00392	Bacterial regulatory proteins, gntR family
CT43_RS24520	PF07071	KDGP aldolase
CT43_RS24525	PF03841	L-seryl-tRNA selenium transferase
CT43_RS24530	PF01979	Amidohydrolase family
CT43_RS24535	PF02557	D-alanyl-D-alanine carboxypeptidase
CT43_RS24540	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS24540	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS24545	PF00072	Response regulator receiver domain
CT43_RS24545	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS24550	PF13378	Enolase C-terminal domain-like
CT43_RS24550	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
CT43_RS24555	PF13193	AMP-binding enzyme C-terminal domain
CT43_RS24555	PF00501	AMP-binding enzyme
CT43_RS24560	PF00378	Enoyl-CoA hydratase/isomerase
CT43_RS24565	PF00561	alpha/beta hydrolase fold
CT43_RS24570	PF16582	Middle domain of thiamine pyrophosphate
CT43_RS24570	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CT43_RS24570	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CT43_RS24575	PF00425	chorismate binding enzyme
CT43_RS24580	PF01040	UbiA prenyltransferase family
CT43_RS24585	PF01258	Prokaryotic dksA/traR C4-type zinc finger
CT43_RS24590	PF00313	'Cold-shock' DNA-binding domain
CT43_RS24615	PF00343	Carbohydrate phosphorylase
CT43_RS24620	PF08323	Starch synthase catalytic domain
CT43_RS24620	PF00534	Glycosyl transferases group 1
CT43_RS24625	PF00483	Nucleotidyl transferase
CT43_RS24630	PF00483	Nucleotidyl transferase
CT43_RS24635	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
CT43_RS24635	PF00128	Alpha amylase, catalytic domain
CT43_RS24635	PF02806	Alpha amylase, C-terminal all-beta domain
CT43_RS24650	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CT43_RS24650	PF00056	lactate/malate dehydrogenase, NAD binding domain
CT43_RS24740	PF02308	MgtC family
CT43_RS24745	PF02254	TrkA-N domain
CT43_RS24745	PF07885	Ion channel
CT43_RS24750	PF08868	YugN-like family
CT43_RS24755	PF00342	Phosphoglucose isomerase
CT43_RS24760	PF04070	Domain of unknown function (DUF378)
CT43_RS24765	PF00575	S1 RNA binding domain
CT43_RS24770	PF00155	Aminotransferase class I and II
CT43_RS24775	PF01037	Lrp/AsnC ligand binding domain
CT43_RS24780	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CT43_RS24780	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CT43_RS24785	PF08386	TAP-like protein
CT43_RS24785	PF00561	alpha/beta hydrolase fold
CT43_RS24795	PF00155	Aminotransferase class I and II
CT43_RS24810	PF08810	Kinase associated protein B
CT43_RS24815	PF00929	Exonuclease
CT43_RS24820	PF03600	Citrate transporter
CT43_RS24835	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CT43_RS24835	PF03129	Anticodon binding domain
CT43_RS24840	PF03061	Thioesterase superfamily
CT43_RS24850	PF02632	BioY family
CT43_RS24855	PF00483	Nucleotidyl transferase
CT43_RS24860	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CT43_RS24860	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CT43_RS24860	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CT43_RS24860	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CT43_RS24865	PF10372	Bacterial membrane-spanning protein N-terminus
CT43_RS24865	PF02457	DisA bacterial checkpoint controller nucleotide-binding
CT43_RS24880	PF00892	EamA-like transporter family
CT43_RS24885	PF01040	UbiA prenyltransferase family
CT43_RS24890	PF02789	Cytosol aminopeptidase family, N-terminal domain
CT43_RS24890	PF00883	Cytosol aminopeptidase family, catalytic domain
CT43_RS24895	PF06725	3D domain
CT43_RS24905	PF00293	NUDIX domain
CT43_RS24905	PF13344	Haloacid dehalogenase-like hydrolase
CT43_RS24910	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CT43_RS24915	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CT43_RS24925	PF06445	GyrI-like small molecule binding domain
CT43_RS24940	PF04463	Protein of unknown function (DUF523)
CT43_RS24990	PF01510	N-acetylmuramoyl-L-alanine amidase
CT43_RS24990	PF01471	Putative peptidoglycan binding domain
CT43_RS24990	PF01476	LysM domain
CT43_RS24995	PF05105	Bacteriophage holin family 
CT43_RS25000	PF10779	Haemolysin XhlA
CT43_RS25130	PF04539	Sigma-70 region 3
CT43_RS25130	PF04542	Sigma-70 region 2 
CT43_RS25130	PF04545	Sigma-70, region 4
CT43_RS25155	PF09669	Phage regulatory protein Rha (Phage_pRha)
CT43_RS25155	PF03374	Phage antirepressor protein KilAC domain
CT43_RS25175	PF01381	Helix-turn-helix
CT43_RS25210	PF01596	O-methyltransferase
CT43_RS25225	PF01521	Iron-sulphur cluster biosynthesis
CT43_RS25230	PF01678	Diaminopimelate epimerase
CT43_RS25235	PF07293	Protein of unknown function (DUF1450)
CT43_RS25240	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CT43_RS25250	PF03412	Peptidase C39 family
CT43_RS25250	PF00005	ABC transporter
CT43_RS25250	PF00664	ABC transporter transmembrane region
CT43_RS25255	PF03649	Uncharacterised protein family (UPF0014)
CT43_RS25260	PF03831	PhnA domain
CT43_RS25260	PF08274	PhnA Zinc-Ribbon 
CT43_RS25280	PF01909	Nucleotidyltransferase domain
CT43_RS25280	PF13427	Domain of unknown function (DUF4111)
CT43_RS25285	PF07315	Protein of unknown function (DUF1462)
CT43_RS25290	PF01106	NifU-like domain
CT43_RS25305	PF04608	Phosphatidylglycerophosphatase A
CT43_RS25325	PF15608	PELOTA RNA binding domain
CT43_RS25325	PF11202	Phosphoribosyl transferase (PRTase)
CT43_RS25335	PF02525	Flavodoxin-like fold
CT43_RS25340	PF13344	Haloacid dehalogenase-like hydrolase
CT43_RS25350	PF01934	Protein of unknown function DUF86
CT43_RS25355	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
CT43_RS25375	PF06265	Protein of unknown function (DUF1027)
CT43_RS25380	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
CT43_RS25385	PF13411	MerR HTH family regulatory protein
CT43_RS25385	PF07739	TipAS antibiotic-recognition domain
CT43_RS25390	PF10086	YhfC intramembrane metalloprotease
CT43_RS25410	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
CT43_RS25410	PF04055	Radical SAM superfamily
CT43_RS25415	PF01551	Peptidase family M23
CT43_RS25420	PF09560	Sporulation protein YunB (Spo_YunB)
CT43_RS25425	PF08827	Domain of unknown function (DUF1805)
CT43_RS25430	PF02872	5'-nucleotidase, C-terminal domain
CT43_RS25435	PF01458	Uncharacterized protein family (UPF0051)
CT43_RS25440	PF01592	NifU-like N terminal domain
CT43_RS25445	PF00266	Aminotransferase class-V
CT43_RS25450	PF01458	Uncharacterized protein family (UPF0051)
CT43_RS25455	PF00005	ABC transporter
CT43_RS25460	PF03180	NLPA lipoprotein
CT43_RS25465	PF03180	NLPA lipoprotein
CT43_RS25470	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS25475	PF09383	NIL domain
CT43_RS25475	PF00005	ABC transporter
CT43_RS25485	PF00085	Thioredoxin
CT43_RS25490	PF01751	Toprim domain
CT43_RS25495	PF01597	Glycine cleavage H-protein
CT43_RS25500	PF03960	ArsC family
CT43_RS25535	PF00056	lactate/malate dehydrogenase, NAD binding domain
CT43_RS25535	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CT43_RS25555	PF13305	Tetracyclin repressor-like, C-terminal domain
CT43_RS25555	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS25560	PF00753	Metallo-beta-lactamase superfamily
CT43_RS25565	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
CT43_RS25565	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
CT43_RS25565	PF02770	Acyl-CoA dehydrogenase, middle domain
CT43_RS25570	PF02803	Thiolase, C-terminal domain
CT43_RS25570	PF00108	Thiolase, N-terminal domain
CT43_RS25575	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
CT43_RS25575	PF00378	Enoyl-CoA hydratase/isomerase
CT43_RS25575	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
CT43_RS25580	PF14115	YuzL-like protein
CT43_RS25585	PF07943	Penicillin-binding protein 5, C-terminal domain
CT43_RS25585	PF00768	D-alanyl-D-alanine carboxypeptidase
CT43_RS25590	PF01619	Proline dehydrogenase
CT43_RS25595	PF10835	Protein of unknown function (DUF2573)
CT43_RS25600	PF01910	Thiamine-binding protein
CT43_RS25605	PF02743	Cache domain
CT43_RS25605	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CT43_RS25605	PF00672	HAMP domain
CT43_RS25620	PF07690	Major Facilitator Superfamily
CT43_RS25625	PF13520	Amino acid permease
CT43_RS25640	PF02096	60Kd inner membrane protein
CT43_RS25650	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CT43_RS25650	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_RS25680	PF09335	SNARE associated Golgi protein
CT43_RS25690	PF03734	L,D-transpeptidase catalytic domain
CT43_RS25690	PF17969	L,D-transpeptidase C-terminal domain
CT43_RS25695	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS25695	PF00072	Response regulator receiver domain
CT43_RS25700	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS25700	PF16736	Single Cache-like 
CT43_RS25700	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS25700	PF00989	PAS fold
CT43_RS25715	PF09334	tRNA synthetases class I (M)
CT43_RS25715	PF08264	Anticodon-binding domain of tRNA
CT43_RS25725	PF01609	Transposase DDE domain
CT43_RS25730	PF00672	HAMP domain
CT43_RS25730	PF02743	Cache domain
CT43_RS25730	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CT43_RS25735	PF00672	HAMP domain
CT43_RS25735	PF02743	Cache domain
CT43_RS25735	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CT43_RS25740	PF01883	Iron-sulfur cluster assembly protein
CT43_RS25745	PF03413	Peptidase propeptide and YPEB domain
CT43_RS25745	PF07504	Fungalysin/Thermolysin Propeptide Motif
CT43_RS25745	PF02868	Thermolysin metallopeptidase, alpha-helical domain
CT43_RS25745	PF01447	Thermolysin metallopeptidase, catalytic domain
CT43_RS25750	PF02678	Pirin
CT43_RS25750	PF17954	Quercetinase C-terminal cupin domain
CT43_RS25755	PF01047	MarR family
CT43_RS25765	PF09335	SNARE associated Golgi protein
CT43_RS25770	PF00999	Sodium/hydrogen exchanger family
CT43_RS25775	PF02080	TrkA-C domain
CT43_RS25780	PF01235	Sodium:alanine symporter family
CT43_RS25785	PF00210	Ferritin-like domain
CT43_RS25795	PF05163	DinB family
CT43_RS25805	PF03641	Possible lysine decarboxylase
CT43_RS25815	PF00210	Ferritin-like domain
CT43_RS25820	PF04235	Protein of unknown function (DUF418)
CT43_RS25820	PF07786	Protein of unknown function (DUF1624)
CT43_RS25825	PF07662	Na+ dependent nucleoside transporter C-terminus
CT43_RS25825	PF01773	Na+ dependent nucleoside transporter N-terminus
CT43_RS25830	PF01773	Na+ dependent nucleoside transporter N-terminus
CT43_RS25830	PF07662	Na+ dependent nucleoside transporter C-terminus
CT43_RS25835	PF01235	Sodium:alanine symporter family
CT43_RS25840	PF01235	Sodium:alanine symporter family
CT43_RS25845	PF13460	NAD(P)H-binding 
CT43_RS25860	PF00248	Aldo/keto reductase family
CT43_RS25865	PF07690	Major Facilitator Superfamily
CT43_RS25870	PF01638	HxlR-like helix-turn-helix
CT43_RS25875	PF07849	Protein of unknown function (DUF1641)
CT43_RS25880	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CT43_RS25885	PF00579	tRNA synthetases class I (W and Y)
CT43_RS25885	PF01479	S4 domain
CT43_RS25890	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
CT43_RS25890	PF01565	FAD binding domain 
CT43_RS25915	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
CT43_RS25920	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
CT43_RS25935	PF13302	Acetyltransferase (GNAT) domain
CT43_RS25940	PF06146	Phosphate-starvation-inducible E
CT43_RS25950	PF00857	Isochorismatase family
CT43_RS25955	PF01037	Lrp/AsnC ligand binding domain
CT43_RS25975	PF17440	Thiol-activated cytolysin beta sandwich domain
CT43_RS25975	PF01289	Thiol-activated cytolysin
CT43_RS25985	PF00005	ABC transporter
CT43_RS25990	PF01032	FecCD transport family
CT43_RS25995	PF01032	FecCD transport family
CT43_RS26005	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS26005	PF00072	Response regulator receiver domain
CT43_RS26015	PF01668	SmpB protein
CT43_RS26020	PF17876	Cold shock domain
CT43_RS26020	PF00773	RNB domain
CT43_RS26020	PF00575	S1 RNA binding domain
CT43_RS26020	PF08206	Ribonuclease B OB domain
CT43_RS26025	PF12146	Serine aminopeptidase, S33
CT43_RS26030	PF03840	Preprotein translocase SecG subunit
CT43_RS26035	PF04172	LrgB-like family 
CT43_RS26040	PF03788	LrgA family
CT43_RS26045	PF01156	Inosine-uridine preferring nucleoside hydrolase
CT43_RS26050	PF00113	Enolase, C-terminal TIM barrel domain
CT43_RS26050	PF03952	Enolase, N-terminal domain
CT43_RS26055	PF01676	Metalloenzyme superfamily
CT43_RS26055	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
CT43_RS26060	PF00121	Triosephosphate isomerase
CT43_RS26065	PF00162	Phosphoglycerate kinase
CT43_RS26070	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
CT43_RS26070	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CT43_RS26075	PF04198	Putative sugar-binding domain
CT43_RS26085	PF04552	Sigma-54, DNA binding domain
CT43_RS26085	PF04963	Sigma-54 factor, core binding domain
CT43_RS26085	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
CT43_RS26095	PF07730	Histidine kinase
CT43_RS26095	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS26100	PF00196	Bacterial regulatory proteins, luxR family
CT43_RS26100	PF00072	Response regulator receiver domain
CT43_RS26120	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
CT43_RS26125	PF07451	Stage V sporulation protein AD (SpoVAD)
CT43_RS26130	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
CT43_RS26140	PF04239	Protein of unknown function (DUF421)
CT43_RS26145	PF00574	Clp protease
CT43_RS26150	PF00381	PTS HPr component phosphorylation site
CT43_RS26155	PF10298	WhiA N-terminal LAGLIDADG-like domain
CT43_RS26155	PF14527	WhiA LAGLIDADG-like domain
CT43_RS26155	PF02650	WhiA C-terminal HTH domain
CT43_RS26160	PF01933	Uncharacterised protein family UPF0052
CT43_RS26165	PF03668	P-loop ATPase protein family
CT43_RS26170	PF00293	NUDIX domain
CT43_RS26180	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CT43_RS26190	PF14602	Hexapeptide repeat of succinyl-transferase
CT43_RS26195	PF13419	Haloacid dehalogenase-like hydrolase
CT43_RS26200	PF01790	Prolipoprotein diacylglyceryl transferase
CT43_RS26205	PF07475	HPr Serine kinase C-terminal domain
CT43_RS26205	PF02603	HPr Serine kinase N terminus
CT43_RS26210	PF04020	Mycobacterial 4 TMS phage holin, superfamily IV
CT43_RS26220	PF17755	UvrA DNA-binding domain
CT43_RS26220	PF17760	UvrA interaction domain
CT43_RS26220	PF00005	ABC transporter
CT43_RS26225	PF17757	UvrB interaction domain
CT43_RS26225	PF12344	Ultra-violet resistance protein B
CT43_RS26225	PF00271	Helicase conserved C-terminal domain
CT43_RS26225	PF04851	Type III restriction enzyme, res subunit
CT43_RS26225	PF02151	UvrB/uvrC motif
CT43_RS26240	PF13411	MerR HTH family regulatory protein
CT43_RS26240	PF07739	TipAS antibiotic-recognition domain
CT43_RS26255	PF03601	Conserved hypothetical protein 698
CT43_RS26260	PF03466	LysR substrate binding domain
CT43_RS26260	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CT43_RS26265	PF00376	MerR family regulatory protein
CT43_RS26265	PF09278	MerR, DNA binding
CT43_RS26270	PF03358	NADPH-dependent FMN reductase
CT43_RS26275	PF12848	ABC transporter
CT43_RS26275	PF16326	ABC transporter C-terminal domain
CT43_RS26275	PF00005	ABC transporter
CT43_RS26280	PF01906	Putative heavy-metal-binding
CT43_RS26285	PF00005	ABC transporter
CT43_RS26285	PF00664	ABC transporter transmembrane region
CT43_RS26290	PF17820	PDZ domain
CT43_RS26295	PF17820	PDZ domain
CT43_RS26295	PF03572	Peptidase family S41
CT43_RS26295	PF01471	Putative peptidoglycan binding domain
CT43_RS26300	PF02687	FtsX-like permease family
CT43_RS26300	PF18075	FtsX extracellular domain
CT43_RS26305	PF00005	ABC transporter
CT43_RS26310	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
CT43_RS26315	PF00472	RF-1 domain
CT43_RS26315	PF03462	PCRF domain
CT43_RS26320	PF00271	Helicase conserved C-terminal domain
CT43_RS26320	PF02810	SEC-C motif
CT43_RS26320	PF07516	SecA Wing and Scaffold domain
CT43_RS26320	PF01043	SecA preprotein cross-linking domain
CT43_RS26320	PF07517	SecA DEAD-like domain
CT43_RS26325	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
CT43_RS26325	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus
CT43_RS26330	PF00313	'Cold-shock' DNA-binding domain
CT43_RS26340	PF04851	Type III restriction enzyme, res subunit
CT43_RS26340	PF00271	Helicase conserved C-terminal domain
CT43_RS26345	PF00877	NlpC/P60 family
CT43_RS26345	PF01476	LysM domain
CT43_RS26350	PF01638	HxlR-like helix-turn-helix
CT43_RS26355	PF02645	Uncharacterised protein, DegV family COG1307
CT43_RS26360	PF09186	Domain of unknown function (DUF1949)
CT43_RS26360	PF01205	Uncharacterized protein family UPF0029
CT43_RS26370	PF02350	UDP-N-acetylglucosamine 2-epimerase
CT43_RS26375	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
CT43_RS26375	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
CT43_RS26375	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
CT43_RS26380	PF00953	Glycosyl transferase family 4
CT43_RS26385	PF01522	Polysaccharide deacetylase
CT43_RS26390	PF00158	Sigma-54 interaction domain
CT43_RS26390	PF03610	PTS system fructose IIA component
CT43_RS26390	PF00874	PRD domain
CT43_RS26400	PF02417	Chromate transporter
CT43_RS26405	PF04794	YdjC-like protein
CT43_RS26410	PF11975	Family 4 glycosyl hydrolase C-terminal domain
CT43_RS26410	PF02056	Family 4 glycosyl hydrolase
CT43_RS26415	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
CT43_RS26420	PF02378	Phosphotransferase system, EIIC 
CT43_RS26425	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CT43_RS26435	PF02675	S-adenosylmethionine decarboxylase 
CT43_RS26440	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
CT43_RS26445	PF02378	Phosphotransferase system, EIIC 
CT43_RS26450	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CT43_RS26455	PF00375	Sodium:dicarboxylate symporter family
CT43_RS26475	PF03466	LysR substrate binding domain
CT43_RS26475	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CT43_RS26490	PF01654	Cytochrome bd terminal oxidase subunit I
CT43_RS26495	PF02322	Cytochrome bd terminal oxidase subunit II
CT43_RS26500	PF02040	Arsenical pump membrane protein
CT43_RS26505	PF13667	ThiC-associated domain 
CT43_RS26505	PF01964	Radical SAM ThiC family
CT43_RS26530	PF02652	L-lactate permease
CT43_RS26540	PF09988	Uncharacterized metal-binding protein (DUF2227)
CT43_RS26550	PF00884	Sulfatase
CT43_RS26555	PF01063	Amino-transferase class IV
CT43_RS26560	PF01476	LysM domain
CT43_RS26560	PF00877	NlpC/P60 family
CT43_RS26565	PF01773	Na+ dependent nucleoside transporter N-terminus
CT43_RS26565	PF07662	Na+ dependent nucleoside transporter C-terminus
CT43_RS26585	PF02028	BCCT, betaine/carnitine/choline family transporter
CT43_RS26590	PF06725	3D domain
CT43_RS26590	PF01476	LysM domain
CT43_RS26615	PF04434	SWIM zinc finger
CT43_RS26620	PF00271	Helicase conserved C-terminal domain
CT43_RS26620	PF00176	SNF2 family N-terminal domain
CT43_RS26620	PF12419	SNF2 Helicase protein 
CT43_RS26630	PF02371	Transposase IS116/IS110/IS902 family
CT43_RS26630	PF01548	Transposase
CT43_RS26655	PF04542	Sigma-70 region 2 
CT43_RS26655	PF04545	Sigma-70, region 4
CT43_RS26660	PF04893	Yip1 domain
CT43_RS26665	PF12704	MacB-like periplasmic core domain
CT43_RS26665	PF02687	FtsX-like permease family
CT43_RS26670	PF00005	ABC transporter
CT43_RS26690	PF07690	Major Facilitator Superfamily
CT43_RS26705	PF16736	Single Cache-like 
CT43_RS26705	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS26705	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS26705	PF00989	PAS fold
CT43_RS26710	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS26710	PF00072	Response regulator receiver domain
CT43_RS26715	PF01238	Phosphomannose isomerase type I
CT43_RS26725	PF05043	Mga helix-turn-helix domain
CT43_RS26725	PF00874	PRD domain
CT43_RS26725	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CT43_RS26725	PF08279	HTH domain
CT43_RS26730	PF16363	GDP-mannose 4,6 dehydratase
CT43_RS26740	PF03816	Cell envelope-related transcriptional attenuator domain
CT43_RS26745	PF01238	Phosphomannose isomerase type I
CT43_RS26750	PF00483	Nucleotidyl transferase
CT43_RS26750	PF01050	Mannose-6-phosphate isomerase
CT43_RS26760	PF00534	Glycosyl transferases group 1
CT43_RS26780	PF12464	Maltose acetyltransferase 
CT43_RS26780	PF00132	Bacterial transferase hexapeptide (six repeats)
CT43_RS26790	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
CT43_RS26790	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
CT43_RS26790	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
CT43_RS26795	PF02397	Bacterial sugar transferase
CT43_RS26800	PF00483	Nucleotidyl transferase
CT43_RS26810	PF13614	AAA domain
CT43_RS26815	PF02706	Chain length determinant protein
CT43_RS26815	PF13807	G-rich domain on putative tyrosine kinase
CT43_RS26820	PF13614	AAA domain
CT43_RS26825	PF07977	FabA-like domain
CT43_RS26835	PF12116	Stage III sporulation protein D
CT43_RS26845	PF01551	Peptidase family M23
CT43_RS26855	PF00005	ABC transporter
CT43_RS26860	PF04397	LytTr DNA-binding domain
CT43_RS26860	PF00072	Response regulator receiver domain
CT43_RS26865	PF08486	Stage II sporulation protein
CT43_RS26870	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CT43_RS26880	PF06612	Protein of unknown function (DUF1146)
CT43_RS26885	PF00361	Proton-conducting membrane transporter
CT43_RS26890	PF00361	Proton-conducting membrane transporter
CT43_RS26895	PF01010	NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus
CT43_RS26895	PF00361	Proton-conducting membrane transporter
CT43_RS26895	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
CT43_RS26900	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
CT43_RS26905	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
CT43_RS26915	PF00146	NADH dehydrogenase
CT43_RS26920	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
CT43_RS26925	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
CT43_RS26930	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
CT43_RS26935	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
CT43_RS26940	PF03707	Bacterial signalling protein N terminal repeat
CT43_RS26940	PF00990	Diguanylate cyclase, GGDEF domain
CT43_RS26940	PF00563	EAL domain
CT43_RS26955	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
CT43_RS26955	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
CT43_RS26960	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CT43_RS26960	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CT43_RS26965	PF00231	ATP synthase
CT43_RS26970	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CT43_RS26970	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CT43_RS26970	PF00306	ATP synthase alpha/beta chain, C terminal domain
CT43_RS26975	PF00213	ATP synthase delta (OSCP) subunit
CT43_RS26980	PF00430	ATP synthase B/B' CF(0)
CT43_RS26985	PF00137	ATP synthase subunit C
CT43_RS26990	PF00119	ATP synthase A chain
CT43_RS26995	PF03899	ATP synthase I chain
CT43_RS27015	PF00464	Serine hydroxymethyltransferase
CT43_RS27020	PF04260	Protein of unknown function (DUF436) 
CT43_RS27025	PF02502	Ribose/Galactose Isomerase
CT43_RS27030	PF01451	Low molecular weight phosphotyrosine protein phosphatase
CT43_RS27035	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CT43_RS27040	PF07681	DoxX
CT43_RS27045	PF01613	Flavin reductase like domain
CT43_RS27055	PF02659	Putative manganese efflux pump
CT43_RS27060	PF03481	Putative GTP-binding controlling metal-binding
CT43_RS27060	PF01300	Telomere recombination
CT43_RS27070	PF09551	Stage II sporulation protein R (spore_II_R)
CT43_RS27075	PF13847	Methyltransferase domain
CT43_RS27075	PF17827	PrmC N-terminal domain
CT43_RS27080	PF00472	RF-1 domain
CT43_RS27080	PF03462	PCRF domain
CT43_RS27085	PF00265	Thymidine kinase
CT43_RS27090	PF01197	Ribosomal protein L31
CT43_RS27095	PF07498	Rho termination factor, N-terminal domain
CT43_RS27095	PF07497	Rho termination factor, RNA-binding domain
CT43_RS27095	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CT43_RS27100	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
CT43_RS27105	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CT43_RS27110	PF01116	Fructose-bisphosphate aldolase class-II
CT43_RS27115	PF00072	Response regulator receiver domain
CT43_RS27120	PF10740	Domain of unknown function (DUF2529)
CT43_RS27125	PF06418	CTP synthase N-terminus
CT43_RS27125	PF00117	Glutamine amidotransferase class-I
CT43_RS27130	PF05066	HB1, ASXL, restriction endonuclease HTH domain
CT43_RS27140	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
CT43_RS27140	PF02770	Acyl-CoA dehydrogenase, middle domain
CT43_RS27140	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
CT43_RS27145	PF02770	Acyl-CoA dehydrogenase, middle domain
CT43_RS27145	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
CT43_RS27145	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
CT43_RS27150	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
CT43_RS27150	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
CT43_RS27155	PF00108	Thiolase, N-terminal domain
CT43_RS27155	PF02803	Thiolase, C-terminal domain
CT43_RS27160	PF02754	Cysteine-rich domain
CT43_RS27160	PF13183	4Fe-4S dicluster domain
CT43_RS27165	PF13091	PLD-like domain
CT43_RS27170	PF03851	UV-endonuclease UvdE
CT43_RS27175	PF03707	Bacterial signalling protein N terminal repeat
CT43_RS27175	PF00563	EAL domain
CT43_RS27175	PF00990	Diguanylate cyclase, GGDEF domain
CT43_RS27190	PF02868	Thermolysin metallopeptidase, alpha-helical domain
CT43_RS27190	PF07504	Fungalysin/Thermolysin Propeptide Motif
CT43_RS27190	PF03413	Peptidase propeptide and YPEB domain
CT43_RS27190	PF01447	Thermolysin metallopeptidase, catalytic domain
CT43_RS27195	PF00196	Bacterial regulatory proteins, luxR family
CT43_RS27195	PF00072	Response regulator receiver domain
CT43_RS27200	PF07730	Histidine kinase
CT43_RS27200	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS27210	PF00005	ABC transporter
CT43_RS27215	PF00557	Metallopeptidase family M24
CT43_RS27225	PF02225	PA domain
CT43_RS27225	PF04389	Peptidase family M28
CT43_RS27245	PF04542	Sigma-70 region 2 
CT43_RS27245	PF08281	Sigma-70, region 4
CT43_RS27250	PF05746	DALR anticodon binding domain
CT43_RS27250	PF03485	Arginyl tRNA synthetase N terminal domain
CT43_RS27250	PF00750	tRNA synthetases class I (R)
CT43_RS27255	PF09148	Domain of unknown function (DUF1934)
CT43_RS27260	PF17676	LD-carboxypeptidase C-terminal domain
CT43_RS27260	PF02016	LD-carboxypeptidase N-terminal domain
CT43_RS27280	PF00491	Arginase family
CT43_RS27285	PF17284	Spermidine synthase tetramerisation domain
CT43_RS27290	PF07690	Major Facilitator Superfamily
CT43_RS27295	PF13411	MerR HTH family regulatory protein
CT43_RS27300	PF03009	Glycerophosphoryl diester phosphodiesterase family
CT43_RS27305	PF00912	Transglycosylase
CT43_RS27305	PF00905	Penicillin binding protein transpeptidase domain
CT43_RS27310	PF08741	YwhD family
CT43_RS27315	PF02163	Peptidase family M50
CT43_RS27320	PF01361	Tautomerase enzyme
CT43_RS27325	PF01966	HD domain
CT43_RS27330	PF01497	Periplasmic binding protein
CT43_RS27335	PF00005	ABC transporter
CT43_RS27340	PF01032	FecCD transport family
CT43_RS27345	PF01032	FecCD transport family
CT43_RS27350	PF07293	Protein of unknown function (DUF1450)
CT43_RS27360	PF03099	Biotin/lipoate A/B protein ligase family
CT43_RS27365	PF01515	Phosphate acetyl/butaryl transferase
CT43_RS27370	PF06778	Chlorite dismutase
CT43_RS27375	PF07943	Penicillin-binding protein 5, C-terminal domain
CT43_RS27375	PF00768	D-alanyl-D-alanine carboxypeptidase
CT43_RS27380	PF07486	Cell Wall Hydrolase
CT43_RS27385	PF09671	Spore coat protein (Spore_GerQ)
CT43_RS27390	PF04241	Protein of unknown function (DUF423)
CT43_RS27400	PF02254	TrkA-N domain
CT43_RS27400	PF07885	Ion channel
CT43_RS27405	PF00860	Permease family
CT43_RS27415	PF12823	Domain of unknown function (DUF3817)
CT43_RS27420	PF03167	Uracil DNA glycosylase superfamily
CT43_RS27425	PF12679	ABC-2 family transporter protein
CT43_RS27430	PF00005	ABC transporter
CT43_RS27435	PF13472	GDSL-like Lipase/Acylhydrolase family
CT43_RS27440	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
CT43_RS27440	PF00356	Bacterial regulatory proteins, lacI family
CT43_RS27450	PF03447	Homoserine dehydrogenase, NAD binding domain
CT43_RS27450	PF00742	Homoserine dehydrogenase
CT43_RS27450	PF01842	ACT domain
CT43_RS27455	PF04204	Homoserine O-succinyltransferase 
CT43_RS27460	PF01053	Cys/Met metabolism PLP-dependent enzyme
CT43_RS27470	PF13419	Haloacid dehalogenase-like hydrolase
CT43_RS27475	PF00027	Cyclic nucleotide-binding domain
CT43_RS27480	PF02525	Flavodoxin-like fold
CT43_RS27485	PF00072	Response regulator receiver domain
CT43_RS27485	PF00196	Bacterial regulatory proteins, luxR family
CT43_RS27490	PF13185	GAF domain
CT43_RS27490	PF07730	Histidine kinase
CT43_RS27495	PF08543	Phosphomethylpyrimidine kinase
CT43_RS27500	PF00990	Diguanylate cyclase, GGDEF domain
CT43_RS27500	PF07694	5TMR of 5TMR-LYT
CT43_RS27505	PF04328	Selenoprotein, putative 
CT43_RS27510	PF02554	Carbon starvation protein CstA
CT43_RS27510	PF13722	5TM C-terminal transporter carbon starvation CstA
CT43_RS27515	PF00072	Response regulator receiver domain
CT43_RS27515	PF04397	LytTr DNA-binding domain
CT43_RS27525	PF03808	Glycosyl transferase WecB/TagA/CpsF family
CT43_RS27530	PF13439	Glycosyltransferase Family 4
CT43_RS27530	PF00534	Glycosyl transferases group 1
CT43_RS27540	PF03458	UPF0126 domain
CT43_RS27545	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CT43_RS27555	PF03061	Thioesterase superfamily
CT43_RS27570	PF00535	Glycosyl transferase family 2
CT43_RS27580	PF09586	Bacterial membrane protein YfhO
CT43_RS27585	PF00535	Glycosyl transferase family 2
CT43_RS27595	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS27595	PF08361	MAATS-type transcriptional repressor, C-terminal region
CT43_RS27600	PF12848	ABC transporter
CT43_RS27600	PF00005	ABC transporter
CT43_RS27605	PF00440	Bacterial regulatory proteins, tetR family
CT43_RS27610	PF00873	AcrB/AcrD/AcrF family
CT43_RS27615	PF01641	SelR domain
CT43_RS27615	PF01625	Peptide methionine sulfoxide reductase
CT43_RS27620	PF01594	AI-2E family transporter
CT43_RS27625	PF04172	LrgB-like family 
CT43_RS27630	PF03788	LrgA family
CT43_RS27635	PF00072	Response regulator receiver domain
CT43_RS27635	PF04397	LytTr DNA-binding domain
CT43_RS27640	PF06580	Histidine kinase
CT43_RS27640	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS27640	PF07694	5TMR of 5TMR-LYT
CT43_RS27640	PF13492	GAF domain
CT43_RS27645	PF07690	Major Facilitator Superfamily
CT43_RS27650	PF02028	BCCT, betaine/carnitine/choline family transporter
CT43_RS27655	PF02898	Nitric oxide synthase, oxygenase domain
CT43_RS27660	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
CT43_RS27660	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
CT43_RS27670	PF02293	AmiS/UreI family transporter
CT43_RS27680	PF16363	GDP-mannose 4,6 dehydratase
CT43_RS27685	PF03006	Haemolysin-III related
CT43_RS27695	PF00270	DEAD/DEAH box helicase
CT43_RS27695	PF00271	Helicase conserved C-terminal domain
CT43_RS27695	PF03880	DbpA RNA binding domain   
CT43_RS27700	PF00478	IMP dehydrogenase / GMP reductase domain
CT43_RS27705	PF08439	Oligopeptidase F
CT43_RS27705	PF01432	Peptidase family M3
CT43_RS27715	PF00989	PAS fold
CT43_RS27715	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS27715	PF13188	PAS domain
CT43_RS27715	PF13426	PAS domain
CT43_RS27715	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS27720	PF02590	Predicted SPOUT methyltransferase
CT43_RS27730	PF13180	PDZ domain
CT43_RS27735	PF00753	Metallo-beta-lactamase superfamily
CT43_RS27740	PF09648	YycH protein
CT43_RS27750	PF00512	His Kinase A (phospho-acceptor) domain
CT43_RS27750	PF13426	PAS domain
CT43_RS27750	PF00672	HAMP domain
CT43_RS27750	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS27755	PF00486	Transcriptional regulatory protein, C terminal
CT43_RS27755	PF00072	Response regulator receiver domain
CT43_RS27780	PF00709	Adenylosuccinate synthetase
CT43_RS27785	PF03796	DnaB-like helicase C terminal domain
CT43_RS27785	PF00772	DnaB-like helicase N terminal domain
CT43_RS27790	PF03948	Ribosomal protein L9, C-terminal domain
CT43_RS27790	PF01281	Ribosomal protein L9, N-terminal domain
CT43_RS27795	PF01368	DHH family
CT43_RS27795	PF02272	DHHA1 domain
CT43_RS27800	PF09991	Predicted membrane protein (DUF2232)
CT43_RS27805	PF01084	Ribosomal protein S18
CT43_RS27810	PF00436	Single-strand binding protein family
CT43_RS27815	PF01250	Ribosomal protein S6
CT43_RS27820	PF06071	Protein of unknown function (DUF933)
CT43_RS27820	PF01926	50S ribosome-binding GTPase
CT43_RS27825	PF06107	Bacterial protein of unknown function (DUF951)
CT43_RS27830	PF00924	Mechanosensitive ion channel
CT43_RS27835	PF06866	Protein of unknown function (DUF1256)
CT43_RS27840	PF02195	ParB-like nuclease domain
CT43_RS27840	PF17762	HTH domain found in ParB protein
CT43_RS27845	PF13614	AAA domain
CT43_RS27850	PF17762	HTH domain found in ParB protein
CT43_RS27850	PF02195	ParB-like nuclease domain
CT43_RS27855	PF02527	rRNA small subunit methyltransferase G
CT43_RS27860	PF13932	GidA associated domain
CT43_RS27860	PF01134	Glucose inhibited division protein A
CT43_RS27865	PF12631	MnmE helical domain
CT43_RS27865	PF10396	GTP-binding protein TrmE N-terminus
CT43_RS27865	PF01926	50S ribosome-binding GTPase
CT43_RS27870	PF01424	R3H domain
CT43_RS27870	PF14804	Jag N-terminus
CT43_RS27875	PF02096	60Kd inner membrane protein
CT43_RS27880	PF00825	Ribonuclease P
CT43_RS27885	PF00468	Ribosomal protein L34
CT43_RS27915	PF00521	DNA gyrase/topoisomerase IV, subunit A
CT43_RS27915	PF03989	DNA gyrase C-terminal domain, beta-propeller
CT43_RS27930	PF03989	DNA gyrase C-terminal domain, beta-propeller
CT43_RS27930	PF00521	DNA gyrase/topoisomerase IV, subunit A
CT43_RS27935	PF00521	DNA gyrase/topoisomerase IV, subunit A
CT43_RS27935	PF03989	DNA gyrase C-terminal domain, beta-propeller
CT43_RS28350	PF00217	ATP:guanido phosphotransferase, C-terminal catalytic domain
CT43_RS28365	PF00004	ATPase family associated with various cellular activities (AAA)
CT43_RS28365	PF07724	AAA domain (Cdc48 subfamily)
CT43_RS28365	PF17871	AAA lid domain
CT43_RS28365	PF02861	Clp amino terminal domain, pathogenicity island component
CT43_RS28365	PF10431	C-terminal, D2-small domain, of ClpB protein 
CT43_RS28370	PF07724	AAA domain (Cdc48 subfamily)
CT43_RS28370	PF10431	C-terminal, D2-small domain, of ClpB protein 
CT43_RS28370	PF00004	ATPase family associated with various cellular activities (AAA)
CT43_RS28370	PF17871	AAA lid domain
CT43_RS28370	PF02861	Clp amino terminal domain, pathogenicity island component
CT43_RS28375	PF17871	AAA lid domain
CT43_RS28375	PF00004	ATPase family associated with various cellular activities (AAA)
CT43_RS28375	PF07724	AAA domain (Cdc48 subfamily)
CT43_RS28375	PF10431	C-terminal, D2-small domain, of ClpB protein 
CT43_RS28375	PF02861	Clp amino terminal domain, pathogenicity island component
CT43_RS28420	PF09190	DALR domain
CT43_RS28420	PF01406	tRNA synthetases class I (C) catalytic domain
CT43_RS28425	PF01406	tRNA synthetases class I (C) catalytic domain
CT43_RS28425	PF09190	DALR domain
CT43_RS28430	PF00636	Ribonuclease III domain
CT43_RS28480	PF00687	Ribosomal protein L1p/L10e family
CT43_RS28525	PF04565	RNA polymerase Rpb2, domain 3
CT43_RS28525	PF04560	RNA polymerase Rpb2, domain 7
CT43_RS28525	PF04563	RNA polymerase beta subunit
CT43_RS28525	PF00562	RNA polymerase Rpb2, domain 6
CT43_RS28525	PF04561	RNA polymerase Rpb2, domain 2
CT43_RS28525	PF10385	RNA polymerase beta subunit external 1 domain
CT43_RS28565	PF00679	Elongation factor G C-terminus
CT43_RS28565	PF14492	Elongation Factor G, domain II
CT43_RS28565	PF03144	Elongation factor Tu domain 2
CT43_RS28565	PF00009	Elongation factor Tu GTP binding domain
CT43_RS28565	PF03764	Elongation factor G, domain IV
CT43_RS28690	PF01751	Toprim domain
CT43_RS28690	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS28690	PF00986	DNA gyrase B subunit, carboxyl terminus
CT43_RS28690	PF00204	DNA gyrase B
CT43_RS28705	PF03989	DNA gyrase C-terminal domain, beta-propeller
CT43_RS28705	PF00521	DNA gyrase/topoisomerase IV, subunit A
CT43_RS28760	PF00768	D-alanyl-D-alanine carboxypeptidase
CT43_RS28760	PF07943	Penicillin-binding protein 5, C-terminal domain
CT43_RS28865	PF05175	Methyltransferase small domain
CT43_RS28890	PF01026	TatD related DNase
CT43_RS28945	PF02559	CarD-like/TRCF domain
CT43_RS28945	PF00270	DEAD/DEAH box helicase
CT43_RS28945	PF00271	Helicase conserved C-terminal domain
CT43_RS28945	PF03461	TRCF domain
CT43_RS28945	PF17757	UvrB interaction domain
CT43_RS28950	PF00271	Helicase conserved C-terminal domain
CT43_RS28950	PF02559	CarD-like/TRCF domain
CT43_RS28950	PF17757	UvrB interaction domain
CT43_RS28950	PF00270	DEAD/DEAH box helicase
CT43_RS28950	PF03461	TRCF domain
CT43_RS29570	PF00528	Binding-protein-dependent transport system inner membrane component
CT43_RS29660	PF00892	EamA-like transporter family
CT43_RS29790	PF01225	Mur ligase family, catalytic domain
CT43_RS29790	PF02875	Mur ligase family, glutamate ligase domain
CT43_RS29790	PF08245	Mur ligase middle domain
CT43_RS29815	PF03851	UV-endonuclease UvdE
CT43_RS29970	PF02463	RecF/RecN/SMC N terminal domain
CT43_RS29975	PF02463	RecF/RecN/SMC N terminal domain
CT43_RS30080	PF12169	DNA polymerase III subunits gamma and tau domain III
CT43_RS30085	PF12169	DNA polymerase III subunits gamma and tau domain III
CT43_RS30185	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CT43_RS30200	PF01588	Putative tRNA binding domain
CT43_RS30200	PF09334	tRNA synthetases class I (M)
CT43_RS30200	PF08264	Anticodon-binding domain of tRNA
CT43_RS30215	PF08264	Anticodon-binding domain of tRNA
CT43_RS30215	PF01588	Putative tRNA binding domain
CT43_RS30215	PF09334	tRNA synthetases class I (M)
CT43_RS30260	PF05582	YabG peptidase U57
CT43_RS30295	PF00132	Bacterial transferase hexapeptide (six repeats)
CT43_RS30295	PF00483	Nucleotidyl transferase
CT43_RS30360	PF00986	DNA gyrase B subunit, carboxyl terminus
CT43_RS30360	PF00204	DNA gyrase B
CT43_RS30360	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CT43_RS30360	PF01751	Toprim domain
CT43_RS30370	PF00521	DNA gyrase/topoisomerase IV, subunit A
CT43_RS30370	PF03989	DNA gyrase C-terminal domain, beta-propeller
CT43_RS30550	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CT43_RS30575	PF01588	Putative tRNA binding domain
CT43_RS30575	PF08264	Anticodon-binding domain of tRNA
CT43_RS30575	PF09334	tRNA synthetases class I (M)
CT43_RS30600	PF00288	GHMP kinases N terminal domain
CT43_RS30600	PF08544	GHMP kinases C terminal 
CT43_RS30635	PF14572	Phosphoribosyl synthetase-associated domain
CT43_RS30635	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
CT43_RS30655	PF17757	UvrB interaction domain
CT43_RS30655	PF03461	TRCF domain
CT43_RS30655	PF00270	DEAD/DEAH box helicase
CT43_RS30655	PF02559	CarD-like/TRCF domain
CT43_RS30655	PF00271	Helicase conserved C-terminal domain
CT43_RS30725	PF09179	TilS substrate binding domain
CT43_RS30725	PF11734	TilS substrate C-terminal domain
CT43_RS30725	PF01171	PP-loop family
CT43_RS30740	PF01434	Peptidase family M41
CT43_RS30740	PF00004	ATPase family associated with various cellular activities (AAA)
CT43_RS30740	PF17862	AAA+ lid domain
CT43_RS30740	PF06480	FtsH Extracellular
CT43_RS30810	PF11638	DnaA N-terminal domain
CT43_RS30810	PF08299	Bacterial dnaA protein helix-turn-helix
CT43_RS30810	PF00308	Bacterial dnaA  protein
CT43_RS30840	PF00521	DNA gyrase/topoisomerase IV, subunit A
CT43_RS30840	PF03989	DNA gyrase C-terminal domain, beta-propeller
CT43_RS31050	PF01026	TatD related DNase
CT43_RS31275	PF00308	Bacterial dnaA  protein
CT43_RS31275	PF11638	DnaA N-terminal domain
CT43_RS31275	PF08299	Bacterial dnaA protein helix-turn-helix
CT43_RS31290	PF02463	RecF/RecN/SMC N terminal domain
CT43_RS31355	PF02733	Dak1 domain
CT43_RS31360	PF01555	DNA methylase
