CT43_RS00005	SM00382	ATPases associated with a variety of cellular activities
CT43_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CT43_RS00010	SM00480	DNA polymerase III beta subunit
CT43_RS00025	SM00387	Histidine kinase-like ATPases
CT43_RS00025	SM00433	TopoisomeraseII
CT43_RS00055	SM00116	Domain in cystathionine beta-synthase and other proteins.
CT43_RS00055	SM01240	CT43_RS00055
CT43_RS00060	SM00936	Penicillin-binding protein 5, C-terminal domain 
CT43_RS00110	SM00382	ATPases associated with a variety of cellular activities
CT43_RS00120	SM00493	CT43_RS00120
CT43_RS00185	SM00465	GIY-YIG type nucleases (URI domain)
CT43_RS00195	SM00966	SpoVT / AbrB like domain 
CT43_RS00210	SM00493	CT43_RS00210
CT43_RS00215	SM00650	Ribosomal RNA adenine dimethylases
CT43_RS00260	SM01400	CT43_RS00260
CT43_RS00275	SM00487	DEAD-like helicases superfamily
CT43_RS00275	SM00490	helicase superfamily c-terminal domain
CT43_RS00275	SM00982	CT43_RS00275
CT43_RS00275	SM01058	CarD-like/TRCF domain
CT43_RS00280	SM00966	SpoVT / AbrB like domain 
CT43_RS00295	SM00363	S4 RNA-binding domain
CT43_RS00315	SM00316	Ribosomal protein S1-like RNA-binding domain
CT43_RS00330	SM00331	Sigma factor PP2C-like phosphatases
CT43_RS00330	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CT43_RS00345	SM00382	ATPases associated with a variety of cellular activities
CT43_RS00385	SM00905	Dihydroneopterin aldolase
CT43_RS00395	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS00425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS00465	SM00382	ATPases associated with a variety of cellular activities
CT43_RS00465	SM01086	C-terminal, D2-small domain, of ClpB protein
CT43_RS00470	SM00382	ATPases associated with a variety of cellular activities
CT43_RS00480	SM00670	Large family of predicted nucleotide-binding domains
CT43_RS00505	SM00840	CT43_RS00505
CT43_RS00510	SM00535	Ribonuclease III family
CT43_RS00515	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CT43_RS00525	SM00421	helix_turn_helix, Lux Regulon
CT43_RS00535	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CT43_RS00540	SM00649	Ribosomal protein L11/L12
CT43_RS00570	SM00663	RNA polymerase I subunit A N-terminus
CT43_RS00590	SM00838	Elongation factor G C-terminus
CT43_RS00590	SM00889	Elongation factor G, domain IV
CT43_RS00600	SM01403	CT43_RS00600
CT43_RS00620	SM01382	CT43_RS00620
CT43_RS00620	SM01383	CT43_RS00620
CT43_RS00635	SM00322	K homology RNA-binding domain
CT43_RS00655	SM01374	CT43_RS00655
CT43_RS00720	SM00316	Ribosomal protein S1-like RNA-binding domain
CT43_RS00740	SM00662	RNA polymerases D
CT43_RS00750	SM00382	ATPases associated with a variety of cellular activities
CT43_RS00755	SM00382	ATPases associated with a variety of cellular activities
CT43_RS00785	SM00646	CT43_RS00785
CT43_RS00800	SM01251	CT43_RS00800
CT43_RS00940	SM00382	ATPases associated with a variety of cellular activities
CT43_RS00940	SM00930	CT43_RS00940
CT43_RS00950	SM00829	Enoylreductase
CT43_RS01005	SM00382	ATPases associated with a variety of cellular activities
CT43_RS01010	SM00382	ATPases associated with a variety of cellular activities
CT43_RS01090	SM00563	Phosphate acyltransferases
CT43_RS01095	SM00354	helix_turn _helix lactose operon repressor
CT43_RS01145	SM00382	ATPases associated with a variety of cellular activities
CT43_RS01170	SM00382	ATPases associated with a variety of cellular activities
CT43_RS01175	SM00382	ATPases associated with a variety of cellular activities
CT43_RS01240	SM00487	DEAD-like helicases superfamily
CT43_RS01240	SM00490	helicase superfamily c-terminal domain
CT43_RS01265	SM01005	Alanine racemase, C-terminal domain
CT43_RS01285	SM00731	SprT homologues.
CT43_RS01395	SM00382	ATPases associated with a variety of cellular activities
CT43_RS01400	SM00881	CoA binding domain
CT43_RS01415	SM00883	Chaperonin 10 Kd subunit
CT43_RS01435	SM00860	SMI1 / KNR4 family
CT43_RS01450	SM00448	cheY-homologous receiver domain
CT43_RS01450	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS01455	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS01455	SM00387	Histidine kinase-like ATPases
CT43_RS01455	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS01510	SM00382	ATPases associated with a variety of cellular activities
CT43_RS01590	SM01001	AIR carboxylase
CT43_RS01600	SM00998	Adenylosuccinate lyase C-terminus
CT43_RS01615	SM01211	CT43_RS01615
CT43_RS01640	SM00798	AICARFT/IMPCHase bienzyme
CT43_RS01640	SM00851	MGS-like domain
CT43_RS01645	SM01209	CT43_RS01645
CT43_RS01645	SM01210	CT43_RS01645
CT43_RS01665	SM00244	prohibitin homologues
CT43_RS01685	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CT43_RS01685	SM00292	breast cancer carboxy-terminal domain
CT43_RS01685	SM00532	Ligase N family
CT43_RS01715	SM00382	ATPases associated with a variety of cellular activities
CT43_RS01715	SM00930	CT43_RS01715
CT43_RS01740	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS01760	SM00845	GatB domain
CT43_RS01765	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CT43_RS01780	SM00382	ATPases associated with a variety of cellular activities
CT43_RS01845	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CT43_RS01895	SM01007	Class II Aldolase and Adducin N-terminal domain
CT43_RS01950	SM00387	Histidine kinase-like ATPases
CT43_RS01950	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS02005	SM00062	Bacterial periplasmic substrate-binding proteins
CT43_RS02005	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CT43_RS02010	SM00382	ATPases associated with a variety of cellular activities
CT43_RS02015	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CT43_RS02015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS02045	SM00100	Cyclic nucleotide-monophosphate binding domain
CT43_RS02045	SM00419	helix_turn_helix, cAMP Regulatory protein
CT43_RS02060	SM00642	Alpha-amylase domain
CT43_RS02080	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CT43_RS02080	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CT43_RS02080	SM00493	CT43_RS02080
CT43_RS02100	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CT43_RS02100	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS02125	SM00382	ATPases associated with a variety of cellular activities
CT43_RS02130	SM00382	ATPases associated with a variety of cellular activities
CT43_RS02135	SM00060	Fibronectin type 3 domain
CT43_RS02135	SM00636	CT43_RS02135
CT43_RS02135	SM00637	CT43_RS02135
CT43_RS02170	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS02190	SM00946	Prolyl-tRNA synthetase, C-terminal
CT43_RS02245	SM00226	Low molecular weight phosphatase family
CT43_RS02335	SM00478	endonuclease III
CT43_RS02355	SM00382	ATPases associated with a variety of cellular activities
CT43_RS02375	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS02420	SM00984	UDP binding domain
CT43_RS02500	SM00478	endonuclease III
CT43_RS02500	SM00525	CT43_RS02500
CT43_RS02525	SM00382	ATPases associated with a variety of cellular activities
CT43_RS02545	SM00382	ATPases associated with a variety of cellular activities
CT43_RS02705	SM00567	E-Z type HEAT repeats
CT43_RS02720	SM00052	Putative diguanylate phosphodiesterase
CT43_RS02720	SM00091	PAS domain
CT43_RS02720	SM00267	diguanylate cyclase
CT43_RS02725	SM00763	PrkA AAA domain
CT43_RS02735	SM00365	Leucine-rich repeat, SDS22-like subfamily
CT43_RS02735	SM00369	Leucine-rich repeats, typical (most populated) subfamily
CT43_RS02735	SM00725	NEAr Transporter domain
CT43_RS02750	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CT43_RS02760	SM00244	prohibitin homologues
CT43_RS02765	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CT43_RS02765	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS02770	SM00091	PAS domain
CT43_RS02770	SM00387	Histidine kinase-like ATPases
CT43_RS02775	SM00448	cheY-homologous receiver domain
CT43_RS02795	SM00248	ankyrin repeats
CT43_RS02810	SM00382	ATPases associated with a variety of cellular activities
CT43_RS02835	SM00448	cheY-homologous receiver domain
CT43_RS02835	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS02840	SM00387	Histidine kinase-like ATPases
CT43_RS02840	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS02855	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CT43_RS02855	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS02860	SM00387	Histidine kinase-like ATPases
CT43_RS02865	SM00448	cheY-homologous receiver domain
CT43_RS02875	SM00919	Malic enzyme, NAD binding domain
CT43_RS02875	SM01274	CT43_RS02875
CT43_RS02890	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS02900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS02900	SM00387	Histidine kinase-like ATPases
CT43_RS02900	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS02905	SM00448	cheY-homologous receiver domain
CT43_RS02905	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS02925	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CT43_RS02925	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CT43_RS02940	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CT43_RS02940	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CT43_RS02950	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CT43_RS02965	SM00028	Tetratricopeptide repeats
CT43_RS02965	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS03010	SM01091	Transporter associated domain
CT43_RS03025	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CT43_RS03055	SM00382	ATPases associated with a variety of cellular activities
CT43_RS03080	SM00327	von Willebrand factor (vWF) type A domain
CT43_RS03085	SM00382	ATPases associated with a variety of cellular activities
CT43_RS03090	SM00155	Phospholipase D. Active site motifs.
CT43_RS03100	SM00052	Putative diguanylate phosphodiesterase
CT43_RS03100	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CT43_RS03100	SM00267	diguanylate cyclase
CT43_RS03110	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS03110	SM00866	CT43_RS03110
CT43_RS03120	SM00642	Alpha-amylase domain
CT43_RS03155	SM00382	ATPases associated with a variety of cellular activities
CT43_RS03160	SM00062	Bacterial periplasmic substrate-binding proteins
CT43_RS03160	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CT43_RS03175	SM00507	HNH nucleases
CT43_RS03220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS03220	SM00387	Histidine kinase-like ATPases
CT43_RS03220	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS03225	SM00448	cheY-homologous receiver domain
CT43_RS03225	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS03275	SM00382	ATPases associated with a variety of cellular activities
CT43_RS03280	SM00382	ATPases associated with a variety of cellular activities
CT43_RS03290	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS03300	SM00354	helix_turn _helix lactose operon repressor
CT43_RS03315	SM00382	ATPases associated with a variety of cellular activities
CT43_RS03345	SM00829	Enoylreductase
CT43_RS03355	SM00770	Zinc dependent phospholipase C (alpha toxin)
CT43_RS03375	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS03385	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS03435	SM00382	ATPases associated with a variety of cellular activities
CT43_RS03480	SM01040	BRO family, N-terminal domain
CT43_RS03505	SM00857	Resolvase, N terminal domain
CT43_RS03600	SM00287	Bacterial SH3 domain homologues
CT43_RS03600	SM00644	CT43_RS03600
CT43_RS03665	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CT43_RS03675	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS03725	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS03825	SM00899	CT43_RS03825
CT43_RS03965	SM00116	Domain in cystathionine beta-synthase and other proteins.
CT43_RS03980	SM00287	Bacterial SH3 domain homologues
CT43_RS03990	SM00382	ATPases associated with a variety of cellular activities
CT43_RS04080	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS04120	SM00640	Glycosyl hydrolases family 32
CT43_RS04130	SM00354	helix_turn _helix lactose operon repressor
CT43_RS04195	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS04210	SM00450	Rhodanese Homology Domain
CT43_RS04220	SM00450	Rhodanese Homology Domain
CT43_RS04225	SM00450	Rhodanese Homology Domain
CT43_RS04225	SM00849	Metallo-beta-lactamase superfamily
CT43_RS04235	SM00450	Rhodanese Homology Domain
CT43_RS04240	SM00450	Rhodanese Homology Domain
CT43_RS04265	SM00829	Enoylreductase
CT43_RS04315	SM00287	Bacterial SH3 domain homologues
CT43_RS04325	SM00382	ATPases associated with a variety of cellular activities
CT43_RS04380	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
CT43_RS04480	SM00344	helix_turn_helix ASNC type
CT43_RS04495	SM00422	helix_turn_helix, mercury resistance
CT43_RS04555	SM01060	CT43_RS04555
CT43_RS04585	SM00382	ATPases associated with a variety of cellular activities
CT43_RS04590	SM00382	ATPases associated with a variety of cellular activities
CT43_RS04595	SM00062	Bacterial periplasmic substrate-binding proteins
CT43_RS04595	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CT43_RS04605	SM00382	ATPases associated with a variety of cellular activities
CT43_RS04690	SM00729	Elongator protein 3, MiaB family, Radical SAM
CT43_RS04725	SM00047	Lysozyme subfamily 2
CT43_RS04760	SM00646	CT43_RS04760
CT43_RS04805	SM00382	ATPases associated with a variety of cellular activities
CT43_RS04835	SM00849	Metallo-beta-lactamase superfamily
CT43_RS04855	SM00091	PAS domain
CT43_RS04855	SM00387	Histidine kinase-like ATPases
CT43_RS04860	SM00448	cheY-homologous receiver domain
CT43_RS04875	SM00487	DEAD-like helicases superfamily
CT43_RS04875	SM00490	helicase superfamily c-terminal domain
CT43_RS04925	SM00894	Excalibur calcium-binding domain
CT43_RS04975	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS04995	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CT43_RS05020	SM00287	Bacterial SH3 domain homologues
CT43_RS05035	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS05045	SM00382	ATPases associated with a variety of cellular activities
CT43_RS05065	SM00460	Transglutaminase/protease-like homologues
CT43_RS05155	SM00331	Sigma factor PP2C-like phosphatases
CT43_RS05155	SM00448	cheY-homologous receiver domain
CT43_RS05160	SM00138	Methyltransferase, chemotaxis proteins 
CT43_RS05165	SM00387	Histidine kinase-like ATPases
CT43_RS05165	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS05165	SM00448	cheY-homologous receiver domain
CT43_RS05205	SM00507	HNH nucleases
CT43_RS05210	SM00829	Enoylreductase
CT43_RS05245	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CT43_RS05310	SM00835	Cupin
CT43_RS05315	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS05390	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS05405	SM00382	ATPases associated with a variety of cellular activities
CT43_RS05615	SM00354	helix_turn _helix lactose operon repressor
CT43_RS05625	SM00849	Metallo-beta-lactamase superfamily
CT43_RS05665	SM00382	ATPases associated with a variety of cellular activities
CT43_RS05680	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CT43_RS05695	SM00342	helix_turn_helix, arabinose operon control protein
CT43_RS05695	SM00871	Bacterial transcription activator, effector binding domain
CT43_RS05705	SM00387	Histidine kinase-like ATPases
CT43_RS05705	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS05710	SM00448	cheY-homologous receiver domain
CT43_RS05710	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS05735	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CT43_RS05735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS05770	SM00357	Cold shock protein domain
CT43_RS05885	SM01060	CT43_RS05885
CT43_RS05895	SM00642	Alpha-amylase domain
CT43_RS05900	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS05910	SM00316	Ribosomal protein S1-like RNA-binding domain
CT43_RS05945	SM00382	ATPases associated with a variety of cellular activities
CT43_RS05945	SM01086	C-terminal, D2-small domain, of ClpB protein
CT43_RS05975	SM00825	Beta-ketoacyl synthase
CT43_RS06015	SM00382	ATPases associated with a variety of cellular activities
CT43_RS06020	SM00382	ATPases associated with a variety of cellular activities
CT43_RS06055	SM00155	Phospholipase D. Active site motifs.
CT43_RS06080	SM01118	CT43_RS06080
CT43_RS06090	SM00954	Region found in RelA / SpoT proteins
CT43_RS06315	SM01324	CT43_RS06315
CT43_RS06365	SM00861	Transketolase, pyrimidine binding domain
CT43_RS06370	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS06465	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS06485	SM00382	ATPases associated with a variety of cellular activities
CT43_RS06505	SM00014	Acid phosphatase homologues
CT43_RS06555	SM00448	cheY-homologous receiver domain
CT43_RS06555	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS06565	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS06565	SM00895	CT43_RS06565
CT43_RS06635	SM00822	CT43_RS06635
CT43_RS06670	SM00382	ATPases associated with a variety of cellular activities
CT43_RS06695	SM00420	helix_turn_helix, Deoxyribose operon repressor
CT43_RS06695	SM01134	CT43_RS06695
CT43_RS06705	SM00365	Leucine-rich repeat, SDS22-like subfamily
CT43_RS06705	SM00369	Leucine-rich repeats, typical (most populated) subfamily
CT43_RS06705	SM00725	NEAr Transporter domain
CT43_RS06710	SM01007	Class II Aldolase and Adducin N-terminal domain
CT43_RS06730	SM00387	Histidine kinase-like ATPases
CT43_RS06730	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS06735	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS06755	SM00387	Histidine kinase-like ATPases
CT43_RS06755	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS06825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS06830	SM00382	ATPases associated with a variety of cellular activities
CT43_RS06840	SM00382	ATPases associated with a variety of cellular activities
CT43_RS06860	SM00344	helix_turn_helix ASNC type
CT43_RS06980	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS07045	SM00917	LeuA allosteric (dimerisation) domain
CT43_RS07050	SM01329	CT43_RS07050
CT43_RS07230	SM00387	Histidine kinase-like ATPases
CT43_RS07235	SM00421	helix_turn_helix, Lux Regulon
CT43_RS07235	SM00448	cheY-homologous receiver domain
CT43_RS07325	SM00091	PAS domain
CT43_RS07325	SM00387	Histidine kinase-like ATPases
CT43_RS07325	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS07345	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS07345	SM00387	Histidine kinase-like ATPases
CT43_RS07345	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS07395	SM00363	S4 RNA-binding domain
CT43_RS07415	SM00448	cheY-homologous receiver domain
CT43_RS07415	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS07420	SM00091	PAS domain
CT43_RS07420	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS07420	SM00387	Histidine kinase-like ATPases
CT43_RS07420	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS07430	SM00257	Lysin motif
CT43_RS07455	SM00487	DEAD-like helicases superfamily
CT43_RS07455	SM00490	helicase superfamily c-terminal domain
CT43_RS07465	SM00257	Lysin motif
CT43_RS07475	SM00422	helix_turn_helix, mercury resistance
CT43_RS07485	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CT43_RS07500	SM00644	CT43_RS07500
CT43_RS07510	SM00870	CT43_RS07510
CT43_RS07520	SM00316	Ribosomal protein S1-like RNA-binding domain
CT43_RS07525	SM01240	CT43_RS07525
CT43_RS07580	SM00411	bacterial (prokaryotic) histone like domain
CT43_RS07605	SM00562	CT43_RS07605
CT43_RS07625	SM00028	Tetratricopeptide repeats
CT43_RS07630	SM00914	CT43_RS07630
CT43_RS07675	SM00986	Uracil DNA glycosylase superfamily
CT43_RS07675	SM00987	UreE urease accessory protein, C-terminal domain 
CT43_RS07695	SM00851	MGS-like domain
CT43_RS07740	SM00479	CT43_RS07740
CT43_RS07740	SM00487	DEAD-like helicases superfamily
CT43_RS07740	SM00491	CT43_RS07740
CT43_RS07765	SM00478	endonuclease III
CT43_RS07775	SM00060	Fibronectin type 3 domain
CT43_RS07825	SM00981	CT43_RS07825
CT43_RS07890	SM00450	Rhodanese Homology Domain
CT43_RS07920	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CT43_RS07920	SM00475	5'-3' exonuclease
CT43_RS08030	SM00357	Cold shock protein domain
CT43_RS08080	SM00422	helix_turn_helix, mercury resistance
CT43_RS08080	SM00871	Bacterial transcription activator, effector binding domain
CT43_RS08130	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CT43_RS08180	SM00138	Methyltransferase, chemotaxis proteins 
CT43_RS08255	SM00382	ATPases associated with a variety of cellular activities
CT43_RS08290	SM00260	Two component signalling adaptor domain
CT43_RS08290	SM00448	cheY-homologous receiver domain
CT43_RS08360	SM00382	ATPases associated with a variety of cellular activities
CT43_RS08360	SM00962	SRP54-type protein, GTPase domain
CT43_RS08375	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CT43_RS08420	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS08440	SM00382	ATPases associated with a variety of cellular activities
CT43_RS08455	SM00849	Metallo-beta-lactamase superfamily
CT43_RS08455	SM01027	Beta-Casp domain
CT43_RS08490	SM00855	Phosphoglycerate mutase family
CT43_RS08510	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS08550	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS08550	SM00895	CT43_RS08550
CT43_RS08565	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CT43_RS08590	SM00422	helix_turn_helix, mercury resistance
CT43_RS08655	SM00028	Tetratricopeptide repeats
CT43_RS08665	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS08700	SM00421	helix_turn_helix, Lux Regulon
CT43_RS08700	SM00448	cheY-homologous receiver domain
CT43_RS08710	SM00382	ATPases associated with a variety of cellular activities
CT43_RS08725	SM00155	Phospholipase D. Active site motifs.
CT43_RS08745	SM00919	Malic enzyme, NAD binding domain
CT43_RS08745	SM01274	CT43_RS08745
CT43_RS08750	SM00387	Histidine kinase-like ATPases
CT43_RS08755	SM00448	cheY-homologous receiver domain
CT43_RS08760	SM00487	DEAD-like helicases superfamily
CT43_RS08760	SM00490	helicase superfamily c-terminal domain
CT43_RS08780	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS08955	SM00854	Bacterial capsule synthesis protein PGA_cap
CT43_RS08985	SM00850	LytTr DNA-binding domain
CT43_RS09030	SM00448	cheY-homologous receiver domain
CT43_RS09030	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS09035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS09035	SM00387	Histidine kinase-like ATPases
CT43_RS09035	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS09055	SM00450	Rhodanese Homology Domain
CT43_RS09095	SM01276	CT43_RS09095
CT43_RS09140	SM01133	CT43_RS09140
CT43_RS09150	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CT43_RS09195	SM01011	Aminopeptidase P, N-terminal domain
CT43_RS09215	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CT43_RS09215	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CT43_RS09215	SM00493	CT43_RS09215
CT43_RS09290	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS09300	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS09305	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS09360	SM00487	DEAD-like helicases superfamily
CT43_RS09360	SM00490	helicase superfamily c-terminal domain
CT43_RS09380	SM00482	DNA polymerase A domain
CT43_RS09465	SM00966	SpoVT / AbrB like domain 
CT43_RS09500	SM00857	Resolvase, N terminal domain
CT43_RS09635	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS09680	SM00857	Resolvase, N terminal domain
CT43_RS09725	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CT43_RS09735	SM00382	ATPases associated with a variety of cellular activities
CT43_RS09740	SM00382	ATPases associated with a variety of cellular activities
CT43_RS09775	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS09795	SM00382	ATPases associated with a variety of cellular activities
CT43_RS09800	SM00382	ATPases associated with a variety of cellular activities
CT43_RS09865	SM00287	Bacterial SH3 domain homologues
CT43_RS09875	SM00382	ATPases associated with a variety of cellular activities
CT43_RS09880	SM00448	cheY-homologous receiver domain
CT43_RS09880	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS09885	SM00387	Histidine kinase-like ATPases
CT43_RS09885	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS09965	SM00448	cheY-homologous receiver domain
CT43_RS09965	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS09970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS09970	SM00387	Histidine kinase-like ATPases
CT43_RS09970	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS10040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS10065	SM00460	Transglutaminase/protease-like homologues
CT43_RS10090	SM00966	SpoVT / AbrB like domain 
CT43_RS10100	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CT43_RS10135	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CT43_RS10135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS10195	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CT43_RS10245	SM00855	Phosphoglycerate mutase family
CT43_RS10295	SM00155	Phospholipase D. Active site motifs.
CT43_RS10320	SM01091	Transporter associated domain
CT43_RS10410	SM00855	Phosphoglycerate mutase family
CT43_RS10420	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS10435	SM01005	Alanine racemase, C-terminal domain
CT43_RS10465	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS10580	SM00487	DEAD-like helicases superfamily
CT43_RS10580	SM00490	helicase superfamily c-terminal domain
CT43_RS10600	SM00829	Enoylreductase
CT43_RS10620	SM00849	Metallo-beta-lactamase superfamily
CT43_RS10635	SM00460	Transglutaminase/protease-like homologues
CT43_RS10650	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CT43_RS10670	SM00100	Cyclic nucleotide-monophosphate binding domain
CT43_RS10670	SM00419	helix_turn_helix, cAMP Regulatory protein
CT43_RS10675	SM00729	Elongator protein 3, MiaB family, Radical SAM
CT43_RS10685	SM00852	Probable molybdopterin binding domain
CT43_RS10795	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CT43_RS10800	SM00382	ATPases associated with a variety of cellular activities
CT43_RS10825	SM00567	E-Z type HEAT repeats
CT43_RS10825	SM00932	Scaffold protein Nfu/NifU N terminal
CT43_RS10845	SM00836	DALR anticodon binding domain
CT43_RS10845	SM01016	Arginyl tRNA synthetase N terminal dom
CT43_RS10855	SM00028	Tetratricopeptide repeats
CT43_RS10895	SM00327	von Willebrand factor (vWF) type A domain
CT43_RS10910	SM00382	ATPases associated with a variety of cellular activities
CT43_RS11040	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS11055	SM00382	ATPases associated with a variety of cellular activities
CT43_RS11105	SM00563	Phosphate acyltransferases
CT43_RS11165	SM00646	CT43_RS11165
CT43_RS11210	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CT43_RS11215	SM00421	helix_turn_helix, Lux Regulon
CT43_RS11215	SM00448	cheY-homologous receiver domain
CT43_RS11230	SM00829	Enoylreductase
CT43_RS11250	SM00382	ATPases associated with a variety of cellular activities
CT43_RS11265	SM01350	CT43_RS11265
CT43_RS11300	SM00382	ATPases associated with a variety of cellular activities
CT43_RS11340	SM01091	Transporter associated domain
CT43_RS11355	SM00387	Histidine kinase-like ATPases
CT43_RS11355	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS11370	SM00882	Coenzyme A transferase
CT43_RS11375	SM00882	Coenzyme A transferase
CT43_RS11390	SM00382	ATPases associated with a variety of cellular activities
CT43_RS11425	SM00219	Tyrosine kinase, catalytic domain
CT43_RS11435	SM00014	Acid phosphatase homologues
CT43_RS11620	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CT43_RS11655	SM00823	Phosphopantetheine attachment site
CT43_RS11655	SM00824	Thioesterase
CT43_RS11660	SM00923	MbtH-like protein
CT43_RS11680	SM00411	bacterial (prokaryotic) histone like domain
CT43_RS11720	SM00363	S4 RNA-binding domain
CT43_RS11725	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CT43_RS11730	SM00382	ATPases associated with a variety of cellular activities
CT43_RS11765	SM00849	Metallo-beta-lactamase superfamily
CT43_RS11790	SM00100	Cyclic nucleotide-monophosphate binding domain
CT43_RS11805	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS11815	SM00849	Metallo-beta-lactamase superfamily
CT43_RS11835	SM01059	Chloramphenicol acetyltransferase
CT43_RS11860	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS11895	SM00357	Cold shock protein domain
CT43_RS11920	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CT43_RS11960	SM00382	ATPases associated with a variety of cellular activities
CT43_RS11965	SM00382	ATPases associated with a variety of cellular activities
CT43_RS12025	SM00507	HNH nucleases
CT43_RS12050	SM00644	CT43_RS12050
CT43_RS12080	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS12100	SM00835	Cupin
CT43_RS12170	SM01207	CT43_RS12170
CT43_RS12185	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS12200	SM00849	Metallo-beta-lactamase superfamily
CT43_RS12205	SM00487	DEAD-like helicases superfamily
CT43_RS12205	SM00490	helicase superfamily c-terminal domain
CT43_RS12255	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS12260	SM00855	Phosphoglycerate mutase family
CT43_RS12315	SM00421	helix_turn_helix, Lux Regulon
CT43_RS12320	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS12325	SM00966	SpoVT / AbrB like domain 
CT43_RS12345	SM00936	Penicillin-binding protein 5, C-terminal domain 
CT43_RS12370	SM00823	Phosphopantetheine attachment site
CT43_RS12375	SM00823	Phosphopantetheine attachment site
CT43_RS12405	SM00387	Histidine kinase-like ATPases
CT43_RS12410	SM00448	cheY-homologous receiver domain
CT43_RS12440	SM00465	GIY-YIG type nucleases (URI domain)
CT43_RS12445	SM00342	helix_turn_helix, arabinose operon control protein
CT43_RS12470	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CT43_RS12470	SM00091	PAS domain
CT43_RS12470	SM00387	Histidine kinase-like ATPases
CT43_RS12470	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS12485	SM01022	CT43_RS12485
CT43_RS12585	SM00382	ATPases associated with a variety of cellular activities
CT43_RS12615	SM00878	Biotin carboxylase C-terminal domain
CT43_RS12680	SM00387	Histidine kinase-like ATPases
CT43_RS12680	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS12685	SM00448	cheY-homologous receiver domain
CT43_RS12685	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS12720	SM00342	helix_turn_helix, arabinose operon control protein
CT43_RS12750	SM00382	ATPases associated with a variety of cellular activities
CT43_RS12755	SM00422	helix_turn_helix, mercury resistance
CT43_RS12755	SM00871	Bacterial transcription activator, effector binding domain
CT43_RS12775	SM00382	ATPases associated with a variety of cellular activities
CT43_RS12805	SM00342	helix_turn_helix, arabinose operon control protein
CT43_RS12820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS12895	SM00448	cheY-homologous receiver domain
CT43_RS12895	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS12900	SM00387	Histidine kinase-like ATPases
CT43_RS12915	SM00382	ATPases associated with a variety of cellular activities
CT43_RS12930	SM00382	ATPases associated with a variety of cellular activities
CT43_RS12960	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS12965	SM01209	CT43_RS12965
CT43_RS13020	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS13025	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS13050	SM00382	ATPases associated with a variety of cellular activities
CT43_RS13165	SM00507	HNH nucleases
CT43_RS13260	SM00644	CT43_RS13260
CT43_RS13355	SM00091	PAS domain
CT43_RS13355	SM00387	Histidine kinase-like ATPases
CT43_RS13355	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS13385	SM00382	ATPases associated with a variety of cellular activities
CT43_RS13395	SM00387	Histidine kinase-like ATPases
CT43_RS13395	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS13460	SM00829	Enoylreductase
CT43_RS13465	SM00014	Acid phosphatase homologues
CT43_RS13470	SM00740	CT43_RS13470
CT43_RS13505	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS13520	SM00422	helix_turn_helix, mercury resistance
CT43_RS13545	SM00287	Bacterial SH3 domain homologues
CT43_RS13560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS13625	SM00480	DNA polymerase III beta subunit
CT43_RS13725	SM00465	GIY-YIG type nucleases (URI domain)
CT43_RS13800	SM00448	cheY-homologous receiver domain
CT43_RS13800	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS13805	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS13805	SM00387	Histidine kinase-like ATPases
CT43_RS13805	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS13820	SM00344	helix_turn_helix ASNC type
CT43_RS13835	SM00382	ATPases associated with a variety of cellular activities
CT43_RS13870	SM00642	Alpha-amylase domain
CT43_RS13890	SM00871	Bacterial transcription activator, effector binding domain
CT43_RS13915	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS13920	SM00829	Enoylreductase
CT43_RS14035	SM00382	ATPases associated with a variety of cellular activities
CT43_RS14055	SM00420	helix_turn_helix, Deoxyribose operon repressor
CT43_RS14055	SM01134	CT43_RS14055
CT43_RS14095	SM00861	Transketolase, pyrimidine binding domain
CT43_RS14155	SM00116	Domain in cystathionine beta-synthase and other proteins.
CT43_RS14155	SM00382	ATPases associated with a variety of cellular activities
CT43_RS14190	SM00060	Fibronectin type 3 domain
CT43_RS14190	SM00495	Chitin-binding domain type 3
CT43_RS14305	SM00341	Helicase and RNase D C-terminal
CT43_RS14305	SM00487	DEAD-like helicases superfamily
CT43_RS14305	SM00490	helicase superfamily c-terminal domain
CT43_RS14305	SM00956	CT43_RS14305
CT43_RS14325	SM00646	CT43_RS14325
CT43_RS14345	SM01131	CT43_RS14345
CT43_RS14360	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CT43_RS14380	SM01130	CT43_RS14380
CT43_RS14400	SM00091	PAS domain
CT43_RS14400	SM00382	ATPases associated with a variety of cellular activities
CT43_RS14475	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CT43_RS14500	SM00248	ankyrin repeats
CT43_RS14520	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CT43_RS14530	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS14530	SM00387	Histidine kinase-like ATPases
CT43_RS14530	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS14535	SM00448	cheY-homologous receiver domain
CT43_RS14535	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS14730	SM00382	ATPases associated with a variety of cellular activities
CT43_RS14795	SM00062	Bacterial periplasmic substrate-binding proteins
CT43_RS14800	SM00382	ATPases associated with a variety of cellular activities
CT43_RS14825	SM00028	Tetratricopeptide repeats
CT43_RS14890	SM00849	Metallo-beta-lactamase superfamily
CT43_RS14920	SM00382	ATPases associated with a variety of cellular activities
CT43_RS14960	SM00830	Chorismate mutase type II
CT43_RS15000	SM00860	SMI1 / KNR4 family
CT43_RS15005	SM00287	Bacterial SH3 domain homologues
CT43_RS15055	SM00382	ATPases associated with a variety of cellular activities
CT43_RS15080	SM01133	CT43_RS15080
CT43_RS15100	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CT43_RS15115	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CT43_RS15130	SM00346	helix_turn_helix isocitrate lyase regulation
CT43_RS15150	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS15175	SM00098	Alkaline phosphatase homologues
CT43_RS15185	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS15260	SM01060	CT43_RS15260
CT43_RS15300	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS15305	SM00889	Elongation factor G, domain IV
CT43_RS15320	SM00773	Proposed nucleic acid binding domain
CT43_RS15330	SM00382	ATPases associated with a variety of cellular activities
CT43_RS15350	SM00342	helix_turn_helix, arabinose operon control protein
CT43_RS15350	SM00871	Bacterial transcription activator, effector binding domain
CT43_RS15375	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS15450	SM00387	Histidine kinase-like ATPases
CT43_RS15450	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS15455	SM00448	cheY-homologous receiver domain
CT43_RS15455	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS15465	SM00382	ATPases associated with a variety of cellular activities
CT43_RS15530	SM00797	Allophanate hydrolase subunit 2
CT43_RS15535	SM00796	Allophanate hydrolase subunit 1
CT43_RS15540	SM00346	helix_turn_helix isocitrate lyase regulation
CT43_RS15560	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CT43_RS15675	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS15790	SM00226	Low molecular weight phosphatase family
CT43_RS15805	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CT43_RS15855	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CT43_RS15895	SM00344	helix_turn_helix ASNC type
CT43_RS15955	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS15985	SM00448	cheY-homologous receiver domain
CT43_RS15985	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS15990	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS15990	SM00387	Histidine kinase-like ATPases
CT43_RS15990	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS16020	SM00421	helix_turn_helix, Lux Regulon
CT43_RS16020	SM00448	cheY-homologous receiver domain
CT43_RS16030	SM00382	ATPases associated with a variety of cellular activities
CT43_RS16035	SM00387	Histidine kinase-like ATPases
CT43_RS16035	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS16040	SM00448	cheY-homologous receiver domain
CT43_RS16040	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS16145	SM00382	ATPases associated with a variety of cellular activities
CT43_RS16155	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CT43_RS16170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS16170	SM00387	Histidine kinase-like ATPases
CT43_RS16170	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS16175	SM00448	cheY-homologous receiver domain
CT43_RS16175	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS16240	SM00342	helix_turn_helix, arabinose operon control protein
CT43_RS16255	SM00644	CT43_RS16255
CT43_RS16280	SM00854	Bacterial capsule synthesis protein PGA_cap
CT43_RS16305	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS16375	SM00382	ATPases associated with a variety of cellular activities
CT43_RS16425	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS16505	SM00382	ATPases associated with a variety of cellular activities
CT43_RS16520	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS16580	SM01266	CT43_RS16580
CT43_RS16655	SM01091	Transporter associated domain
CT43_RS16660	SM00422	helix_turn_helix, mercury resistance
CT43_RS16735	SM01350	CT43_RS16735
CT43_RS16740	SM00861	Transketolase, pyrimidine binding domain
CT43_RS16755	SM00829	Enoylreductase
CT43_RS16765	SM00829	Enoylreductase
CT43_RS16780	SM01276	CT43_RS16780
CT43_RS16785	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CT43_RS16785	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS16860	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CT43_RS16875	SM00914	CT43_RS16875
CT43_RS16905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS16905	SM00866	CT43_RS16905
CT43_RS16955	SM00849	Metallo-beta-lactamase superfamily
CT43_RS17015	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CT43_RS17060	SM00871	Bacterial transcription activator, effector binding domain
CT43_RS17065	SM00420	helix_turn_helix, Deoxyribose operon repressor
CT43_RS17075	SM00382	ATPases associated with a variety of cellular activities
CT43_RS17095	SM00849	Metallo-beta-lactamase superfamily
CT43_RS17100	SM00641	Glycosyl hydrolases family 25
CT43_RS17165	SM00849	Metallo-beta-lactamase superfamily
CT43_RS17275	SM00829	Enoylreductase
CT43_RS17280	SM00855	Phosphoglycerate mutase family
CT43_RS17290	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CT43_RS17290	SM00534	ATPase domain of DNA mismatch repair MUTS family
CT43_RS17300	SM00642	Alpha-amylase domain
CT43_RS17320	SM00422	helix_turn_helix, mercury resistance
CT43_RS17320	SM00871	Bacterial transcription activator, effector binding domain
CT43_RS17385	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CT43_RS17390	SM00829	Enoylreductase
CT43_RS17400	SM00028	Tetratricopeptide repeats
CT43_RS17450	SM00148	Phospholipase C, catalytic domain (part); domain X
CT43_RS17455	SM00060	Fibronectin type 3 domain
CT43_RS17490	SM00060	Fibronectin type 3 domain
CT43_RS17490	SM00495	Chitin-binding domain type 3
CT43_RS17490	SM01276	CT43_RS17490
CT43_RS17505	SM00052	Putative diguanylate phosphodiesterase
CT43_RS17505	SM00091	PAS domain
CT43_RS17505	SM00267	diguanylate cyclase
CT43_RS17510	SM00382	ATPases associated with a variety of cellular activities
CT43_RS17525	SM00646	CT43_RS17525
CT43_RS17555	SM00387	Histidine kinase-like ATPases
CT43_RS17555	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS17560	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CT43_RS17585	SM00062	Bacterial periplasmic substrate-binding proteins
CT43_RS17585	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CT43_RS17590	SM00382	ATPases associated with a variety of cellular activities
CT43_RS17620	SM00479	CT43_RS17620
CT43_RS17625	SM00357	Cold shock protein domain
CT43_RS17650	SM01022	CT43_RS17650
CT43_RS17705	SM00822	CT43_RS17705
CT43_RS17760	SM00852	Probable molybdopterin binding domain
CT43_RS17775	SM00729	Elongator protein 3, MiaB family, Radical SAM
CT43_RS17795	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CT43_RS17795	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CT43_RS17905	SM00382	ATPases associated with a variety of cellular activities
CT43_RS17915	SM00420	helix_turn_helix, Deoxyribose operon repressor
CT43_RS17930	SM00434	DNA Topoisomerase IV
CT43_RS17935	SM00387	Histidine kinase-like ATPases
CT43_RS17935	SM00433	TopoisomeraseII
CT43_RS17940	SM00881	CoA binding domain
CT43_RS17945	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CT43_RS17965	SM01207	CT43_RS17965
CT43_RS17980	SM00257	Lysin motif
CT43_RS17980	SM00636	CT43_RS17980
CT43_RS18000	SM00479	CT43_RS18000
CT43_RS18015	SM00382	ATPases associated with a variety of cellular activities
CT43_RS18060	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CT43_RS18095	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS18120	SM00644	CT43_RS18120
CT43_RS18120	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CT43_RS18125	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CT43_RS18140	SM00091	PAS domain
CT43_RS18140	SM00387	Histidine kinase-like ATPases
CT43_RS18140	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS18170	SM01058	CarD-like/TRCF domain
CT43_RS18250	SM00382	ATPases associated with a variety of cellular activities
CT43_RS18310	SM00287	Bacterial SH3 domain homologues
CT43_RS18310	SM00641	Glycosyl hydrolases family 25
CT43_RS18315	SM00382	ATPases associated with a variety of cellular activities
CT43_RS18320	SM00382	ATPases associated with a variety of cellular activities
CT43_RS18335	SM00861	Transketolase, pyrimidine binding domain
CT43_RS18350	SM00382	ATPases associated with a variety of cellular activities
CT43_RS18355	SM00062	Bacterial periplasmic substrate-binding proteins
CT43_RS18380	SM00857	Resolvase, N terminal domain
CT43_RS18405	SM01230	CT43_RS18405
CT43_RS18410	SM00422	helix_turn_helix, mercury resistance
CT43_RS18435	SM00382	ATPases associated with a variety of cellular activities
CT43_RS18475	SM00287	Bacterial SH3 domain homologues
CT43_RS18490	SM00420	helix_turn_helix, Deoxyribose operon repressor
CT43_RS18490	SM01134	CT43_RS18490
CT43_RS18520	SM00636	CT43_RS18520
CT43_RS18535	SM00411	bacterial (prokaryotic) histone like domain
CT43_RS18565	SM00421	helix_turn_helix, Lux Regulon
CT43_RS18580	SM00382	ATPases associated with a variety of cellular activities
CT43_RS18605	SM00342	helix_turn_helix, arabinose operon control protein
CT43_RS18615	SM00478	endonuclease III
CT43_RS18645	SM00052	Putative diguanylate phosphodiesterase
CT43_RS18645	SM00091	PAS domain
CT43_RS18645	SM00267	diguanylate cyclase
CT43_RS18690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS18700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS18700	SM00866	CT43_RS18700
CT43_RS18710	SM00148	Phospholipase C, catalytic domain (part); domain X
CT43_RS18720	SM00257	Lysin motif
CT43_RS18740	SM00382	ATPases associated with a variety of cellular activities
CT43_RS18760	SM00853	MutL C terminal dimerisation domain
CT43_RS18760	SM01340	CT43_RS18760
CT43_RS18765	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CT43_RS18765	SM00534	ATPase domain of DNA mismatch repair MUTS family
CT43_RS18780	SM00729	Elongator protein 3, MiaB family, Radical SAM
CT43_RS18810	SM00322	K homology RNA-binding domain
CT43_RS18810	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CT43_RS18820	SM00382	ATPases associated with a variety of cellular activities
CT43_RS18825	SM00852	Probable molybdopterin binding domain
CT43_RS18835	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS18875	SM00382	ATPases associated with a variety of cellular activities
CT43_RS18885	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS18885	SM00866	CT43_RS18885
CT43_RS18895	SM00382	ATPases associated with a variety of cellular activities
CT43_RS18895	SM00843	CT43_RS18895
CT43_RS18910	SM00849	Metallo-beta-lactamase superfamily
CT43_RS18915	SM01130	CT43_RS18915
CT43_RS19050	SM00507	HNH nucleases
CT43_RS19155	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS19160	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS19180	SM00857	Resolvase, N terminal domain
CT43_RS19210	SM00316	Ribosomal protein S1-like RNA-binding domain
CT43_RS19210	SM00322	K homology RNA-binding domain
CT43_RS19215	SM01387	CT43_RS19215
CT43_RS19220	SM00904	Riboflavin kinase
CT43_RS19255	SM00316	Ribosomal protein S1-like RNA-binding domain
CT43_RS19255	SM00322	K homology RNA-binding domain
CT43_RS19265	SM00479	CT43_RS19265
CT43_RS19265	SM00481	DNA polymerase alpha chain like domain
CT43_RS19275	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CT43_RS19340	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CT43_RS19340	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CT43_RS19340	SM00493	CT43_RS19340
CT43_RS19350	SM00881	CoA binding domain
CT43_RS19400	SM00382	ATPases associated with a variety of cellular activities
CT43_RS19400	SM00962	SRP54-type protein, GTPase domain
CT43_RS19400	SM00963	SRP54-type protein, helical bundle domain
CT43_RS19410	SM00382	ATPases associated with a variety of cellular activities
CT43_RS19410	SM00962	SRP54-type protein, GTPase domain
CT43_RS19410	SM00963	SRP54-type protein, helical bundle domain
CT43_RS19415	SM00968	SMC proteins Flexible Hinge Domain
CT43_RS19420	SM00358	Double-stranded RNA binding motif
CT43_RS19420	SM00535	Ribonuclease III family
CT43_RS19430	SM00822	CT43_RS19430
CT43_RS19435	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CT43_RS19450	SM00487	DEAD-like helicases superfamily
CT43_RS19450	SM00490	helicase superfamily c-terminal domain
CT43_RS19455	SM01120	CT43_RS19455
CT43_RS19455	SM01121	CT43_RS19455
CT43_RS19490	SM00220	Serine/Threonine protein kinases, catalytic domain
CT43_RS19490	SM00740	CT43_RS19490
CT43_RS19495	SM00331	Sigma factor PP2C-like phosphatases
CT43_RS19495	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CT43_RS19520	SM00487	DEAD-like helicases superfamily
CT43_RS19520	SM00490	helicase superfamily c-terminal domain
CT43_RS19530	SM01409	CT43_RS19530
CT43_RS19535	SM00072	Guanylate kinase homologues.
CT43_RS19550	SM00831	Cation transporter/ATPase, N-terminus
CT43_RS19605	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CT43_RS19620	SM00851	MGS-like domain
CT43_RS19620	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CT43_RS19620	SM01209	CT43_RS19620
CT43_RS19625	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CT43_RS19650	SM00363	S4 RNA-binding domain
CT43_RS19675	SM00363	S4 RNA-binding domain
CT43_RS19720	SM00864	Tubulin/FtsZ family, GTPase domain
CT43_RS19720	SM00865	Tubulin/FtsZ family, C-terminal domain
CT43_RS19725	SM00842	Cell division protein FtsA
CT43_RS19765	SM00740	CT43_RS19765
CT43_RS19770	SM00740	CT43_RS19770
CT43_RS19800	SM00717	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
CT43_RS19820	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CT43_RS19860	SM00855	Phosphoglycerate mutase family
CT43_RS19900	SM00507	HNH nucleases
CT43_RS19945	SM00878	Biotin carboxylase C-terminal domain
CT43_RS19965	SM00670	Large family of predicted nucleotide-binding domains
CT43_RS19990	SM00838	Elongation factor G C-terminus
CT43_RS20070	SM00861	Transketolase, pyrimidine binding domain
CT43_RS20100	SM00849	Metallo-beta-lactamase superfamily
CT43_RS20165	SM00052	Putative diguanylate phosphodiesterase
CT43_RS20250	SM00387	Histidine kinase-like ATPases
CT43_RS20250	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS20265	SM00354	helix_turn _helix lactose operon repressor
CT43_RS20285	SM00642	Alpha-amylase domain
CT43_RS20290	SM00642	Alpha-amylase domain
CT43_RS20295	SM00382	ATPases associated with a variety of cellular activities
CT43_RS20330	SM00382	ATPases associated with a variety of cellular activities
CT43_RS20410	SM01007	Class II Aldolase and Adducin N-terminal domain
CT43_RS20440	SM00267	diguanylate cyclase
CT43_RS20475	SM01061	CAT RNA binding domain
CT43_RS20485	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS20485	SM00866	CT43_RS20485
CT43_RS20500	SM00849	Metallo-beta-lactamase superfamily
CT43_RS20590	SM00387	Histidine kinase-like ATPases
CT43_RS20600	SM00936	Penicillin-binding protein 5, C-terminal domain 
CT43_RS20605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS20610	SM00382	ATPases associated with a variety of cellular activities
CT43_RS20630	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS20650	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CT43_RS20745	SM00354	helix_turn _helix lactose operon repressor
CT43_RS20765	SM00704	CDGSH-type zinc finger. Function unknown.
CT43_RS20795	SM00729	Elongator protein 3, MiaB family, Radical SAM
CT43_RS20795	SM00876	Biotin and Thiamin Synthesis associated domain
CT43_RS20845	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS20860	SM00860	SMI1 / KNR4 family
CT43_RS20880	SM00248	ankyrin repeats
CT43_RS20910	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CT43_RS20925	SM00849	Metallo-beta-lactamase superfamily
CT43_RS20950	SM00849	Metallo-beta-lactamase superfamily
CT43_RS20965	SM00831	Cation transporter/ATPase, N-terminus
CT43_RS21005	SM00382	ATPases associated with a variety of cellular activities
CT43_RS21015	SM00062	Bacterial periplasmic substrate-binding proteins
CT43_RS21015	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CT43_RS21050	SM00861	Transketolase, pyrimidine binding domain
CT43_RS21070	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CT43_RS21080	SM00091	PAS domain
CT43_RS21080	SM00382	ATPases associated with a variety of cellular activities
CT43_RS21105	SM00448	cheY-homologous receiver domain
CT43_RS21110	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CT43_RS21125	SM00363	S4 RNA-binding domain
CT43_RS21130	SM00861	Transketolase, pyrimidine binding domain
CT43_RS21165	SM00878	Biotin carboxylase C-terminal domain
CT43_RS21210	SM00382	ATPases associated with a variety of cellular activities
CT43_RS21230	SM00841	Elongation factor P, C-terminal
CT43_RS21230	SM01185	CT43_RS21230
CT43_RS21265	SM00529	Helix-turn-helix diphteria tox regulatory element
CT43_RS21295	SM00450	Rhodanese Homology Domain
CT43_RS21305	SM00354	helix_turn _helix lactose operon repressor
CT43_RS21350	SM00382	ATPases associated with a variety of cellular activities
CT43_RS21355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS21385	SM00487	DEAD-like helicases superfamily
CT43_RS21385	SM00490	helicase superfamily c-terminal domain
CT43_RS21420	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CT43_RS21520	SM01018	B12 binding domain
CT43_RS21545	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CT43_RS21555	SM00849	Metallo-beta-lactamase superfamily
CT43_RS21595	SM00382	ATPases associated with a variety of cellular activities
CT43_RS21660	SM00382	ATPases associated with a variety of cellular activities
CT43_RS21675	SM00518	AP endonuclease family 2
CT43_RS21715	SM00400	zinc finger
CT43_RS21715	SM00493	CT43_RS21715
CT43_RS21715	SM00766	DNA primase DnaG DnaB-binding
CT43_RS21725	SM00116	Domain in cystathionine beta-synthase and other proteins.
CT43_RS21760	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CT43_RS21795	SM00729	Elongator protein 3, MiaB family, Radical SAM
CT43_RS21810	SM00271	DnaJ molecular chaperone homology domain
CT43_RS21830	SM00729	Elongator protein 3, MiaB family, Radical SAM
CT43_RS21840	SM00838	Elongation factor G C-terminus
CT43_RS21870	SM00849	Metallo-beta-lactamase superfamily
CT43_RS21880	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CT43_RS21900	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CT43_RS21910	SM01103	CT43_RS21910
CT43_RS21965	SM00954	Region found in RelA / SpoT proteins
CT43_RS21975	SM00098	Alkaline phosphatase homologues
CT43_RS22000	SM00855	Phosphoglycerate mutase family
CT43_RS22045	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS22070	SM00382	ATPases associated with a variety of cellular activities
CT43_RS22165	SM00732	Likely ribonuclease with RNase H fold.
CT43_RS22175	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CT43_RS22210	SM00028	Tetratricopeptide repeats
CT43_RS22230	SM00382	ATPases associated with a variety of cellular activities
CT43_RS22265	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CT43_RS22265	SM00954	Region found in RelA / SpoT proteins
CT43_RS22310	SM01323	CT43_RS22310
CT43_RS22330	SM00382	ATPases associated with a variety of cellular activities
CT43_RS22335	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CT43_RS22360	SM00257	Lysin motif
CT43_RS22410	SM00382	ATPases associated with a variety of cellular activities
CT43_RS22415	SM00387	Histidine kinase-like ATPases
CT43_RS22420	SM00448	cheY-homologous receiver domain
CT43_RS22420	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS22430	SM01317	CT43_RS22430
CT43_RS22520	SM00257	Lysin motif
CT43_RS22530	SM01004	Delta-aminolevulinic acid dehydratase
CT43_RS22555	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS22570	SM00382	ATPases associated with a variety of cellular activities
CT43_RS22570	SM00464	Found in ATP-dependent protease La (LON)
CT43_RS22575	SM00382	ATPases associated with a variety of cellular activities
CT43_RS22580	SM00382	ATPases associated with a variety of cellular activities
CT43_RS22580	SM00994	ClpX C4-type zinc finger
CT43_RS22580	SM01086	C-terminal, D2-small domain, of ClpB protein
CT43_RS22640	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS22660	SM00857	Resolvase, N terminal domain
CT43_RS22725	SM00909	Sporulation and spore germination
CT43_RS22755	SM00421	helix_turn_helix, Lux Regulon
CT43_RS22775	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS22800	SM00382	ATPases associated with a variety of cellular activities
CT43_RS22850	SM00465	GIY-YIG type nucleases (URI domain)
CT43_RS22860	SM00893	Electron transfer flavoprotein domain
CT43_RS22865	SM00893	Electron transfer flavoprotein domain
CT43_RS22930	SM00382	ATPases associated with a variety of cellular activities
CT43_RS22935	SM00387	Histidine kinase-like ATPases
CT43_RS22935	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS22940	SM00448	cheY-homologous receiver domain
CT43_RS22940	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS22955	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CT43_RS22970	SM00382	ATPases associated with a variety of cellular activities
CT43_RS22985	SM00725	NEAr Transporter domain
CT43_RS22990	SM00725	NEAr Transporter domain
CT43_RS22995	SM00725	NEAr Transporter domain
CT43_RS23005	SM00363	S4 RNA-binding domain
CT43_RS23010	SM00463	Small MutS-related domain
CT43_RS23010	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CT43_RS23010	SM00534	ATPase domain of DNA mismatch repair MUTS family
CT43_RS23015	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CT43_RS23015	SM00481	DNA polymerase alpha chain like domain
CT43_RS23015	SM00483	DNA polymerase X family
CT43_RS23050	SM00873	B3/4 domain
CT43_RS23050	SM00874	tRNA synthetase B5 domain
CT43_RS23050	SM00896	Ferredoxin-fold anticodon binding domain
CT43_RS23060	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CT43_RS23130	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CT43_RS23145	SM00382	ATPases associated with a variety of cellular activities
CT43_RS23165	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CT43_RS23180	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CT43_RS23180	SM01232	CT43_RS23180
CT43_RS23185	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CT43_RS23185	SM00474	3'-5' exonuclease
CT43_RS23185	SM00475	5'-3' exonuclease
CT43_RS23185	SM00482	DNA polymerase A domain
CT43_RS23190	SM00091	PAS domain
CT43_RS23190	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS23190	SM00387	Histidine kinase-like ATPases
CT43_RS23190	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS23195	SM00448	cheY-homologous receiver domain
CT43_RS23195	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS23215	SM01329	CT43_RS23215
CT43_RS23260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS23265	SM00919	Malic enzyme, NAD binding domain
CT43_RS23265	SM01274	CT43_RS23265
CT43_RS23270	SM00481	DNA polymerase alpha chain like domain
CT43_RS23300	SM00116	Domain in cystathionine beta-synthase and other proteins.
CT43_RS23310	SM00849	Metallo-beta-lactamase superfamily
CT43_RS23365	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CT43_RS23365	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CT43_RS23485	SM00981	CT43_RS23485
CT43_RS23525	SM00363	S4 RNA-binding domain
CT43_RS23525	SM01390	CT43_RS23525
CT43_RS23540	SM00363	S4 RNA-binding domain
CT43_RS23560	SM01266	CT43_RS23560
CT43_RS23575	SM00116	Domain in cystathionine beta-synthase and other proteins.
CT43_RS23595	SM00448	cheY-homologous receiver domain
CT43_RS23595	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS23605	SM00248	ankyrin repeats
CT43_RS23635	SM00354	helix_turn _helix lactose operon repressor
CT43_RS23695	SM00422	helix_turn_helix, mercury resistance
CT43_RS23710	SM00382	ATPases associated with a variety of cellular activities
CT43_RS23710	SM00843	CT43_RS23710
CT43_RS23715	SM00646	CT43_RS23715
CT43_RS23755	SM00849	Metallo-beta-lactamase superfamily
CT43_RS23775	SM00642	Alpha-amylase domain
CT43_RS23790	SM00420	helix_turn_helix, Deoxyribose operon repressor
CT43_RS23795	SM00363	S4 RNA-binding domain
CT43_RS23815	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CT43_RS23840	SM01058	CarD-like/TRCF domain
CT43_RS23875	SM00852	Probable molybdopterin binding domain
CT43_RS23890	SM00729	Elongator protein 3, MiaB family, Radical SAM
CT43_RS23910	SM00450	Rhodanese Homology Domain
CT43_RS23985	SM00382	ATPases associated with a variety of cellular activities
CT43_RS24015	SM00729	Elongator protein 3, MiaB family, Radical SAM
CT43_RS24025	SM00382	ATPases associated with a variety of cellular activities
CT43_RS24065	SM00014	Acid phosphatase homologues
CT43_RS24080	SM00852	Probable molybdopterin binding domain
CT43_RS24150	SM00387	Histidine kinase-like ATPases
CT43_RS24155	SM00387	Histidine kinase-like ATPases
CT43_RS24155	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS24160	SM01060	CT43_RS24160
CT43_RS24195	SM00382	ATPases associated with a variety of cellular activities
CT43_RS24265	SM00422	helix_turn_helix, mercury resistance
CT43_RS24275	SM01234	CT43_RS24275
CT43_RS24280	SM00947	Carbonic anhydrase
CT43_RS24345	SM00899	CT43_RS24345
CT43_RS24355	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS24355	SM00387	Histidine kinase-like ATPases
CT43_RS24355	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS24360	SM00448	cheY-homologous receiver domain
CT43_RS24360	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS24390	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CT43_RS24405	SM00382	ATPases associated with a variety of cellular activities
CT43_RS24435	SM00382	ATPases associated with a variety of cellular activities
CT43_RS24440	SM00342	helix_turn_helix, arabinose operon control protein
CT43_RS24440	SM00871	Bacterial transcription activator, effector binding domain
CT43_RS24455	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CT43_RS24460	SM00448	cheY-homologous receiver domain
CT43_RS24460	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS24465	SM00387	Histidine kinase-like ATPases
CT43_RS24480	SM00382	ATPases associated with a variety of cellular activities
CT43_RS24510	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CT43_RS24510	SM00866	CT43_RS24510
CT43_RS24540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS24540	SM00387	Histidine kinase-like ATPases
CT43_RS24540	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS24545	SM00448	cheY-homologous receiver domain
CT43_RS24545	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS24550	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CT43_RS24590	SM00357	Cold shock protein domain
CT43_RS24605	SM00422	helix_turn_helix, mercury resistance
CT43_RS24635	SM00642	Alpha-amylase domain
CT43_RS24765	SM00316	Ribosomal protein S1-like RNA-binding domain
CT43_RS24775	SM00344	helix_turn_helix ASNC type
CT43_RS24810	SM01298	CT43_RS24810
CT43_RS24815	SM00479	CT43_RS24815
CT43_RS24925	SM00871	Bacterial transcription activator, effector binding domain
CT43_RS24970	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS24990	SM00287	Bacterial SH3 domain homologues
CT43_RS24990	SM00644	CT43_RS24990
CT43_RS25085	SM00507	HNH nucleases
CT43_RS25160	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS25175	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS25250	SM00382	ATPases associated with a variety of cellular activities
CT43_RS25385	SM00422	helix_turn_helix, mercury resistance
CT43_RS25400	SM00855	Phosphoglycerate mutase family
CT43_RS25410	SM00729	Elongator protein 3, MiaB family, Radical SAM
CT43_RS25455	SM00382	ATPases associated with a variety of cellular activities
CT43_RS25475	SM00382	ATPases associated with a variety of cellular activities
CT43_RS25475	SM00930	CT43_RS25475
CT43_RS25490	SM00493	CT43_RS25490
CT43_RS25560	SM00849	Metallo-beta-lactamase superfamily
CT43_RS25605	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CT43_RS25605	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS25675	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS25695	SM00448	cheY-homologous receiver domain
CT43_RS25695	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS25700	SM00387	Histidine kinase-like ATPases
CT43_RS25700	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS25730	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CT43_RS25730	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS25735	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CT43_RS25735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS25755	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS25850	SM01276	CT43_RS25850
CT43_RS25895	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
CT43_RS25900	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CT43_RS25955	SM00344	helix_turn_helix ASNC type
CT43_RS25965	SM00347	helix_turn_helix multiple antibiotic resistance protein
CT43_RS25985	SM00382	ATPases associated with a variety of cellular activities
CT43_RS26005	SM00448	cheY-homologous receiver domain
CT43_RS26005	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS26020	SM00316	Ribosomal protein S1-like RNA-binding domain
CT43_RS26020	SM00357	Cold shock protein domain
CT43_RS26020	SM00955	CT43_RS26020
CT43_RS26050	SM01192	CT43_RS26050
CT43_RS26050	SM01193	CT43_RS26050
CT43_RS26070	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CT43_RS26095	SM00387	Histidine kinase-like ATPases
CT43_RS26100	SM00421	helix_turn_helix, Lux Regulon
CT43_RS26100	SM00448	cheY-homologous receiver domain
CT43_RS26185	SM00028	Tetratricopeptide repeats
CT43_RS26225	SM00487	DEAD-like helicases superfamily
CT43_RS26225	SM00490	helicase superfamily c-terminal domain
CT43_RS26240	SM00422	helix_turn_helix, mercury resistance
CT43_RS26250	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS26265	SM00422	helix_turn_helix, mercury resistance
CT43_RS26285	SM00382	ATPases associated with a variety of cellular activities
CT43_RS26295	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CT43_RS26295	SM00245	tail specific protease
CT43_RS26305	SM00382	ATPases associated with a variety of cellular activities
CT43_RS26315	SM00937	CT43_RS26315
CT43_RS26320	SM00957	SecA DEAD-like domain
CT43_RS26320	SM00958	SecA preprotein cross-linking domain
CT43_RS26330	SM00357	Cold shock protein domain
CT43_RS26340	SM00487	DEAD-like helicases superfamily
CT43_RS26340	SM00490	helicase superfamily c-terminal domain
CT43_RS26375	SM00984	UDP binding domain
CT43_RS26390	SM00382	ATPases associated with a variety of cellular activities
CT43_RS26395	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
CT43_RS26560	SM00287	Bacterial SH3 domain homologues
CT43_RS26590	SM00287	Bacterial SH3 domain homologues
CT43_RS26620	SM00487	DEAD-like helicases superfamily
CT43_RS26620	SM00490	helicase superfamily c-terminal domain
CT43_RS26670	SM00382	ATPases associated with a variety of cellular activities
CT43_RS26680	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS26705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS26705	SM00387	Histidine kinase-like ATPases
CT43_RS26705	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS26710	SM00448	cheY-homologous receiver domain
CT43_RS26710	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS26790	SM00984	UDP binding domain
CT43_RS26855	SM00382	ATPases associated with a variety of cellular activities
CT43_RS26860	SM00850	LytTr DNA-binding domain
CT43_RS26940	SM00052	Putative diguanylate phosphodiesterase
CT43_RS26940	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CT43_RS26940	SM00091	PAS domain
CT43_RS26940	SM00267	diguanylate cyclase
CT43_RS26960	SM00382	ATPases associated with a variety of cellular activities
CT43_RS27030	SM00226	Low molecular weight phosphatase family
CT43_RS27045	SM00903	Flavin reductase like domain
CT43_RS27080	SM00937	CT43_RS27080
CT43_RS27095	SM00357	Cold shock protein domain
CT43_RS27095	SM00382	ATPases associated with a variety of cellular activities
CT43_RS27095	SM00959	Rho termination factor, N-terminal domain
CT43_RS27115	SM00448	cheY-homologous receiver domain
CT43_RS27165	SM00155	Phospholipase D. Active site motifs.
CT43_RS27175	SM00052	Putative diguanylate phosphodiesterase
CT43_RS27175	SM00267	diguanylate cyclase
CT43_RS27185	SM00530	Helix-turn-helix XRE-family like proteins 
CT43_RS27195	SM00421	helix_turn_helix, Lux Regulon
CT43_RS27195	SM00448	cheY-homologous receiver domain
CT43_RS27210	SM00382	ATPases associated with a variety of cellular activities
CT43_RS27250	SM00836	DALR anticodon binding domain
CT43_RS27250	SM01016	Arginyl tRNA synthetase N terminal dom
CT43_RS27295	SM00422	helix_turn_helix, mercury resistance
CT43_RS27325	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CT43_RS27335	SM00382	ATPases associated with a variety of cellular activities
CT43_RS27375	SM00936	Penicillin-binding protein 5, C-terminal domain 
CT43_RS27420	SM00986	Uracil DNA glycosylase superfamily
CT43_RS27420	SM00987	UreE urease accessory protein, C-terminal domain 
CT43_RS27430	SM00382	ATPases associated with a variety of cellular activities
CT43_RS27440	SM00354	helix_turn _helix lactose operon repressor
CT43_RS27475	SM00100	Cyclic nucleotide-monophosphate binding domain
CT43_RS27485	SM00421	helix_turn_helix, Lux Regulon
CT43_RS27485	SM00448	cheY-homologous receiver domain
CT43_RS27490	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CT43_RS27500	SM00267	diguanylate cyclase
CT43_RS27515	SM00448	cheY-homologous receiver domain
CT43_RS27515	SM00850	LytTr DNA-binding domain
CT43_RS27545	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CT43_RS27600	SM00382	ATPases associated with a variety of cellular activities
CT43_RS27635	SM00448	cheY-homologous receiver domain
CT43_RS27635	SM00850	LytTr DNA-binding domain
CT43_RS27640	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CT43_RS27640	SM00387	Histidine kinase-like ATPases
CT43_RS27695	SM00487	DEAD-like helicases superfamily
CT43_RS27695	SM00490	helicase superfamily c-terminal domain
CT43_RS27700	SM01240	CT43_RS27700
CT43_RS27715	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CT43_RS27715	SM00387	Histidine kinase-like ATPases
CT43_RS27715	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS27730	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CT43_RS27735	SM00849	Metallo-beta-lactamase superfamily
CT43_RS27750	SM00091	PAS domain
CT43_RS27750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CT43_RS27750	SM00387	Histidine kinase-like ATPases
CT43_RS27750	SM00388	His Kinase A (phosphoacceptor) domain
CT43_RS27755	SM00448	cheY-homologous receiver domain
CT43_RS27755	SM00862	Transcriptional regulatory protein, C terminal
CT43_RS27780	SM00788	Adenylosuccinate synthetase
CT43_RS27795	SM00267	diguanylate cyclase
CT43_RS27840	SM00470	ParB-like nuclease domain
CT43_RS27850	SM00470	ParB-like nuclease domain
CT43_RS27860	SM01228	CT43_RS27860
CT43_RS27870	SM00393	Putative single-stranded nucleic acids-binding domain
CT43_RS27870	SM01245	CT43_RS27870
CT43_RS28375	SM01086	C-terminal, D2-small domain, of ClpB protein
CT43_RS28425	SM00840	CT43_RS28425
CT43_RS30360	SM00433	TopoisomeraseII
CT43_RS30635	SM01400	CT43_RS30635
CT43_RS30840	SM00434	DNA Topoisomerase IV
