NF53_RS00005 SM00382 ATPases associated with a variety of cellular activities NF53_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain NF53_RS00010 SM00480 DNA polymerase III beta subunit NF53_RS00025 SM00387 Histidine kinase-like ATPases NF53_RS00025 SM00433 TopoisomeraseII NF53_RS00030 SM00434 DNA Topoisomerase IV NF53_RS00065 SM00116 Domain in cystathionine beta-synthase and other proteins. NF53_RS00065 SM01240 NF53_RS00065 NF53_RS00070 SM00936 Penicillin-binding protein 5, C-terminal domain NF53_RS00125 SM00382 ATPases associated with a variety of cellular activities NF53_RS00135 SM00493 NF53_RS00135 NF53_RS00210 SM00465 GIY-YIG type nucleases (URI domain) NF53_RS00220 SM00966 SpoVT / AbrB like domain NF53_RS00235 SM00493 NF53_RS00235 NF53_RS00240 SM00650 Ribosomal RNA adenine dimethylases NF53_RS00285 SM01400 NF53_RS00285 NF53_RS00300 SM00487 DEAD-like helicases superfamily NF53_RS00300 SM00490 helicase superfamily c-terminal domain NF53_RS00300 SM00982 NF53_RS00300 NF53_RS00300 SM01058 CarD-like/TRCF domain NF53_RS00305 SM00966 SpoVT / AbrB like domain NF53_RS00320 SM00363 S4 RNA-binding domain NF53_RS00340 SM00316 Ribosomal protein S1-like RNA-binding domain NF53_RS00355 SM00331 Sigma factor PP2C-like phosphatases NF53_RS00355 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain NF53_RS00360 SM00977 TilS substrate C-terminal domain NF53_RS00370 SM00382 ATPases associated with a variety of cellular activities NF53_RS00410 SM00905 Dihydroneopterin aldolase NF53_RS00420 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS00465 SM00382 ATPases associated with a variety of cellular activities NF53_RS00465 SM01086 C-terminal, D2-small domain, of ClpB protein NF53_RS00470 SM00382 ATPases associated with a variety of cellular activities NF53_RS00480 SM00670 Large family of predicted nucleotide-binding domains NF53_RS00505 SM00840 NF53_RS00505 NF53_RS00510 SM00535 Ribonuclease III family NF53_RS00515 SM00967 RNA 2'-O ribose methyltransferase substrate binding NF53_RS00525 SM00421 helix_turn_helix, Lux Regulon NF53_RS00540 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. NF53_RS00545 SM00649 Ribosomal protein L11/L12 NF53_RS00575 SM00663 RNA polymerase I subunit A N-terminus NF53_RS00595 SM00838 Elongation factor G C-terminus NF53_RS00595 SM00889 Elongation factor G, domain IV NF53_RS00605 SM01403 NF53_RS00605 NF53_RS00625 SM01382 NF53_RS00625 NF53_RS00625 SM01383 NF53_RS00625 NF53_RS00640 SM00322 K homology RNA-binding domain NF53_RS00660 SM01374 NF53_RS00660 NF53_RS00665 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. NF53_RS00725 SM00316 Ribosomal protein S1-like RNA-binding domain NF53_RS00745 SM00662 RNA polymerases D NF53_RS00755 SM00382 ATPases associated with a variety of cellular activities NF53_RS00760 SM00382 ATPases associated with a variety of cellular activities NF53_RS00790 SM00646 NF53_RS00790 NF53_RS00805 SM01251 NF53_RS00805 NF53_RS00945 SM00382 ATPases associated with a variety of cellular activities NF53_RS00945 SM00930 NF53_RS00945 NF53_RS00955 SM00829 Enoylreductase NF53_RS00995 SM00342 helix_turn_helix, arabinose operon control protein NF53_RS01080 SM00563 Phosphate acyltransferases NF53_RS01090 SM00354 helix_turn _helix lactose operon repressor NF53_RS01150 SM00382 ATPases associated with a variety of cellular activities NF53_RS01175 SM00382 ATPases associated with a variety of cellular activities NF53_RS01180 SM00382 ATPases associated with a variety of cellular activities NF53_RS01240 SM00487 DEAD-like helicases superfamily NF53_RS01240 SM00490 helicase superfamily c-terminal domain NF53_RS01265 SM01005 Alanine racemase, C-terminal domain NF53_RS01280 SM00316 Ribosomal protein S1-like RNA-binding domain NF53_RS01280 SM00732 Likely ribonuclease with RNase H fold. NF53_RS01290 SM00731 SprT homologues. NF53_RS01400 SM00382 ATPases associated with a variety of cellular activities NF53_RS01405 SM00881 CoA binding domain NF53_RS01420 SM00883 Chaperonin 10 Kd subunit NF53_RS01440 SM00448 cheY-homologous receiver domain NF53_RS01440 SM00862 Transcriptional regulatory protein, C terminal NF53_RS01445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS01445 SM00387 Histidine kinase-like ATPases NF53_RS01445 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS01490 SM01022 NF53_RS01490 NF53_RS01505 SM00382 ATPases associated with a variety of cellular activities NF53_RS01510 SM00387 Histidine kinase-like ATPases NF53_RS01510 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS01515 SM00448 cheY-homologous receiver domain NF53_RS01515 SM00862 Transcriptional regulatory protein, C terminal NF53_RS01610 SM01001 AIR carboxylase NF53_RS01620 SM00998 Adenylosuccinate lyase C-terminus NF53_RS01635 SM01211 NF53_RS01635 NF53_RS01660 SM00798 AICARFT/IMPCHase bienzyme NF53_RS01660 SM00851 MGS-like domain NF53_RS01665 SM01209 NF53_RS01665 NF53_RS01665 SM01210 NF53_RS01665 NF53_RS01675 SM00244 prohibitin homologues NF53_RS01700 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NF53_RS01700 SM00292 breast cancer carboxy-terminal domain NF53_RS01700 SM00532 Ligase N family NF53_RS01725 SM00382 ATPases associated with a variety of cellular activities NF53_RS01725 SM00930 NF53_RS01725 NF53_RS01755 SM00347 helix_turn_helix multiple antibiotic resistance protein NF53_RS01775 SM00845 GatB domain NF53_RS01780 SM00046 Diacylglycerol kinase catalytic domain (presumed) NF53_RS01800 SM00382 ATPases associated with a variety of cellular activities NF53_RS01875 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NF53_RS01920 SM01007 Class II Aldolase and Adducin N-terminal domain NF53_RS01985 SM00387 Histidine kinase-like ATPases NF53_RS01985 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS02030 SM00062 Bacterial periplasmic substrate-binding proteins NF53_RS02030 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. NF53_RS02035 SM00382 ATPases associated with a variety of cellular activities NF53_RS02040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NF53_RS02040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS02070 SM00100 Cyclic nucleotide-monophosphate binding domain NF53_RS02070 SM00419 helix_turn_helix, cAMP Regulatory protein NF53_RS02085 SM00642 Alpha-amylase domain NF53_RS02105 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain NF53_RS02105 SM00437 Bacterial DNA topoisomerase I DNA-binding domain NF53_RS02105 SM00493 NF53_RS02105 NF53_RS02125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NF53_RS02125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS02150 SM00382 ATPases associated with a variety of cellular activities NF53_RS02155 SM00060 Fibronectin type 3 domain NF53_RS02155 SM00636 NF53_RS02155 NF53_RS02155 SM00637 NF53_RS02155 NF53_RS02190 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS02210 SM00946 Prolyl-tRNA synthetase, C-terminal NF53_RS02255 SM00831 Cation transporter/ATPase, N-terminus NF53_RS02265 SM00226 Low molecular weight phosphatase family NF53_RS02355 SM00478 endonuclease III NF53_RS02375 SM00382 ATPases associated with a variety of cellular activities NF53_RS02395 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS02450 SM00984 UDP binding domain NF53_RS02535 SM00478 endonuclease III NF53_RS02535 SM00525 NF53_RS02535 NF53_RS02560 SM00382 ATPases associated with a variety of cellular activities NF53_RS02580 SM00382 ATPases associated with a variety of cellular activities NF53_RS02740 SM00567 E-Z type HEAT repeats NF53_RS02755 SM00052 Putative diguanylate phosphodiesterase NF53_RS02755 SM00091 PAS domain NF53_RS02755 SM00267 diguanylate cyclase NF53_RS02765 SM00763 PrkA AAA domain NF53_RS02780 SM00365 Leucine-rich repeat, SDS22-like subfamily NF53_RS02780 SM00725 NEAr Transporter domain NF53_RS02795 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NF53_RS02805 SM00244 prohibitin homologues NF53_RS02810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NF53_RS02810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS02815 SM00091 PAS domain NF53_RS02815 SM00387 Histidine kinase-like ATPases NF53_RS02820 SM00448 cheY-homologous receiver domain NF53_RS02840 SM00248 ankyrin repeats NF53_RS02855 SM00382 ATPases associated with a variety of cellular activities NF53_RS02880 SM00448 cheY-homologous receiver domain NF53_RS02880 SM00862 Transcriptional regulatory protein, C terminal NF53_RS02885 SM00387 Histidine kinase-like ATPases NF53_RS02885 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS02900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NF53_RS02900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS02905 SM00387 Histidine kinase-like ATPases NF53_RS02910 SM00448 cheY-homologous receiver domain NF53_RS02920 SM00919 Malic enzyme, NAD binding domain NF53_RS02920 SM01274 NF53_RS02920 NF53_RS02935 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS02945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS02945 SM00387 Histidine kinase-like ATPases NF53_RS02945 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS02950 SM00448 cheY-homologous receiver domain NF53_RS02950 SM00862 Transcriptional regulatory protein, C terminal NF53_RS02970 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NF53_RS02970 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NF53_RS02985 SM01002 Alanine dehydrogenase/PNT, C-terminal domain NF53_RS02985 SM01003 Alanine dehydrogenase/PNT, N-terminal domain NF53_RS02995 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NF53_RS03010 SM00028 Tetratricopeptide repeats NF53_RS03010 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS03055 SM01091 Transporter associated domain NF53_RS03070 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NF53_RS03100 SM00382 ATPases associated with a variety of cellular activities NF53_RS03125 SM00327 von Willebrand factor (vWF) type A domain NF53_RS03130 SM00382 ATPases associated with a variety of cellular activities NF53_RS03135 SM00155 Phospholipase D. Active site motifs. NF53_RS03145 SM00052 Putative diguanylate phosphodiesterase NF53_RS03145 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NF53_RS03145 SM00267 diguanylate cyclase NF53_RS03155 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS03155 SM00866 NF53_RS03155 NF53_RS03165 SM00642 Alpha-amylase domain NF53_RS03200 SM00382 ATPases associated with a variety of cellular activities NF53_RS03205 SM00062 Bacterial periplasmic substrate-binding proteins NF53_RS03205 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. NF53_RS03255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS03255 SM00387 Histidine kinase-like ATPases NF53_RS03255 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS03260 SM00448 cheY-homologous receiver domain NF53_RS03260 SM00862 Transcriptional regulatory protein, C terminal NF53_RS03290 SM00347 helix_turn_helix multiple antibiotic resistance protein NF53_RS03300 SM00354 helix_turn _helix lactose operon repressor NF53_RS03315 SM00382 ATPases associated with a variety of cellular activities NF53_RS03350 SM00829 Enoylreductase NF53_RS03360 SM00770 Zinc dependent phospholipase C (alpha toxin) NF53_RS03400 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NF53_RS03410 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS03460 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS03560 SM00899 NF53_RS03560 NF53_RS03700 SM00116 Domain in cystathionine beta-synthase and other proteins. NF53_RS03720 SM00287 Bacterial SH3 domain homologues NF53_RS03730 SM00382 ATPases associated with a variety of cellular activities NF53_RS03820 SM00347 helix_turn_helix multiple antibiotic resistance protein NF53_RS03865 SM00640 Glycosyl hydrolases family 32 NF53_RS03875 SM00354 helix_turn _helix lactose operon repressor NF53_RS03950 SM00450 Rhodanese Homology Domain NF53_RS03960 SM00450 Rhodanese Homology Domain NF53_RS03965 SM00450 Rhodanese Homology Domain NF53_RS03965 SM00849 Metallo-beta-lactamase superfamily NF53_RS03975 SM00450 Rhodanese Homology Domain NF53_RS03980 SM00450 Rhodanese Homology Domain NF53_RS04005 SM00829 Enoylreductase NF53_RS04060 SM00287 Bacterial SH3 domain homologues NF53_RS04070 SM00382 ATPases associated with a variety of cellular activities NF53_RS04125 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen NF53_RS04225 SM00344 helix_turn_helix ASNC type NF53_RS04240 SM00422 helix_turn_helix, mercury resistance NF53_RS04270 SM00448 cheY-homologous receiver domain NF53_RS04270 SM00862 Transcriptional regulatory protein, C terminal NF53_RS04275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS04275 SM00387 Histidine kinase-like ATPases NF53_RS04275 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS04285 SM00382 ATPases associated with a variety of cellular activities NF53_RS04295 SM00382 ATPases associated with a variety of cellular activities NF53_RS04305 SM00849 Metallo-beta-lactamase superfamily NF53_RS04350 SM01060 NF53_RS04350 NF53_RS04385 SM00382 ATPases associated with a variety of cellular activities NF53_RS04390 SM00382 ATPases associated with a variety of cellular activities NF53_RS04395 SM00062 Bacterial periplasmic substrate-binding proteins NF53_RS04395 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. NF53_RS04405 SM00382 ATPases associated with a variety of cellular activities NF53_RS04475 SM00644 NF53_RS04475 NF53_RS04480 SM00729 Elongator protein 3, MiaB family, Radical SAM NF53_RS04515 SM00047 Lysozyme subfamily 2 NF53_RS04550 SM00646 NF53_RS04550 NF53_RS04595 SM00382 ATPases associated with a variety of cellular activities NF53_RS04600 SM00382 ATPases associated with a variety of cellular activities NF53_RS04610 SM00849 Metallo-beta-lactamase superfamily NF53_RS04735 SM00091 PAS domain NF53_RS04735 SM00387 Histidine kinase-like ATPases NF53_RS04740 SM00448 cheY-homologous receiver domain NF53_RS04755 SM00487 DEAD-like helicases superfamily NF53_RS04755 SM00490 helicase superfamily c-terminal domain NF53_RS04785 SM00091 PAS domain NF53_RS04785 SM00382 ATPases associated with a variety of cellular activities NF53_RS04835 SM00894 Excalibur calcium-binding domain NF53_RS04845 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NF53_RS04950 SM00347 helix_turn_helix multiple antibiotic resistance protein NF53_RS04990 SM00287 Bacterial SH3 domain homologues NF53_RS05005 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS05015 SM00460 Transglutaminase/protease-like homologues NF53_RS05095 SM00331 Sigma factor PP2C-like phosphatases NF53_RS05095 SM00448 cheY-homologous receiver domain NF53_RS05100 SM00138 Methyltransferase, chemotaxis proteins NF53_RS05105 SM00387 Histidine kinase-like ATPases NF53_RS05105 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS05105 SM00448 cheY-homologous receiver domain NF53_RS05140 SM00829 Enoylreductase NF53_RS05175 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NF53_RS05205 SM00028 Tetratricopeptide repeats NF53_RS05235 SM00835 Cupin NF53_RS05330 SM00347 helix_turn_helix multiple antibiotic resistance protein NF53_RS05345 SM00382 ATPases associated with a variety of cellular activities NF53_RS05510 SM00354 helix_turn _helix lactose operon repressor NF53_RS05520 SM00849 Metallo-beta-lactamase superfamily NF53_RS05585 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NF53_RS05600 SM00342 helix_turn_helix, arabinose operon control protein NF53_RS05600 SM00871 Bacterial transcription activator, effector binding domain NF53_RS05610 SM00387 Histidine kinase-like ATPases NF53_RS05610 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS05615 SM00448 cheY-homologous receiver domain NF53_RS05615 SM00862 Transcriptional regulatory protein, C terminal NF53_RS05640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NF53_RS05640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS05675 SM00357 Cold shock protein domain NF53_RS05790 SM01060 NF53_RS05790 NF53_RS05805 SM00642 Alpha-amylase domain NF53_RS05815 SM00316 Ribosomal protein S1-like RNA-binding domain NF53_RS05860 SM00382 ATPases associated with a variety of cellular activities NF53_RS05860 SM01086 C-terminal, D2-small domain, of ClpB protein NF53_RS05890 SM00825 Beta-ketoacyl synthase NF53_RS05930 SM00382 ATPases associated with a variety of cellular activities NF53_RS05935 SM00382 ATPases associated with a variety of cellular activities NF53_RS05975 SM00155 Phospholipase D. Active site motifs. NF53_RS06005 SM01118 NF53_RS06005 NF53_RS06015 SM00954 Region found in RelA / SpoT proteins NF53_RS06170 SM00635 Bacterial Ig-like domain 2 NF53_RS06245 SM01324 NF53_RS06245 NF53_RS06285 SM00861 Transketolase, pyrimidine binding domain NF53_RS06345 SM00857 Resolvase, N terminal domain NF53_RS06375 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS06440 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS06460 SM00382 ATPases associated with a variety of cellular activities NF53_RS06480 SM00014 Acid phosphatase homologues NF53_RS06530 SM00448 cheY-homologous receiver domain NF53_RS06530 SM00862 Transcriptional regulatory protein, C terminal NF53_RS06535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS06535 SM00387 Histidine kinase-like ATPases NF53_RS06535 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS06540 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS06540 SM00895 NF53_RS06540 NF53_RS06610 SM00822 NF53_RS06610 NF53_RS06645 SM00382 ATPases associated with a variety of cellular activities NF53_RS06670 SM00420 helix_turn_helix, Deoxyribose operon repressor NF53_RS06670 SM01134 NF53_RS06670 NF53_RS06680 SM00365 Leucine-rich repeat, SDS22-like subfamily NF53_RS06680 SM00369 Leucine-rich repeats, typical (most populated) subfamily NF53_RS06680 SM00725 NEAr Transporter domain NF53_RS06685 SM01007 Class II Aldolase and Adducin N-terminal domain NF53_RS06705 SM00387 Histidine kinase-like ATPases NF53_RS06705 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS06710 SM00347 helix_turn_helix multiple antibiotic resistance protein NF53_RS06730 SM00387 Histidine kinase-like ATPases NF53_RS06730 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS06815 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS06820 SM00382 ATPases associated with a variety of cellular activities NF53_RS06830 SM00382 ATPases associated with a variety of cellular activities NF53_RS06850 SM00344 helix_turn_helix ASNC type NF53_RS06965 SM00347 helix_turn_helix multiple antibiotic resistance protein NF53_RS07040 SM00917 LeuA allosteric (dimerisation) domain NF53_RS07045 SM01329 NF53_RS07045 NF53_RS07230 SM00387 Histidine kinase-like ATPases NF53_RS07235 SM00421 helix_turn_helix, Lux Regulon NF53_RS07235 SM00448 cheY-homologous receiver domain NF53_RS07330 SM00387 Histidine kinase-like ATPases NF53_RS07330 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS07350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS07350 SM00387 Histidine kinase-like ATPases NF53_RS07350 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS07400 SM00363 S4 RNA-binding domain NF53_RS07420 SM00448 cheY-homologous receiver domain NF53_RS07420 SM00862 Transcriptional regulatory protein, C terminal NF53_RS07425 SM00091 PAS domain NF53_RS07425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS07425 SM00387 Histidine kinase-like ATPases NF53_RS07425 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS07435 SM00257 Lysin motif NF53_RS07460 SM00487 DEAD-like helicases superfamily NF53_RS07460 SM00490 helicase superfamily c-terminal domain NF53_RS07470 SM00257 Lysin motif NF53_RS07480 SM00422 helix_turn_helix, mercury resistance NF53_RS07490 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NF53_RS07505 SM00644 NF53_RS07505 NF53_RS07515 SM00870 NF53_RS07515 NF53_RS07530 SM00316 Ribosomal protein S1-like RNA-binding domain NF53_RS07535 SM01240 NF53_RS07535 NF53_RS07595 SM00411 bacterial (prokaryotic) histone like domain NF53_RS07620 SM00562 NF53_RS07620 NF53_RS07640 SM00028 Tetratricopeptide repeats NF53_RS07645 SM00914 NF53_RS07645 NF53_RS07690 SM00986 Uracil DNA glycosylase superfamily NF53_RS07690 SM00987 UreE urease accessory protein, C-terminal domain NF53_RS07710 SM00851 MGS-like domain NF53_RS07760 SM00479 NF53_RS07760 NF53_RS07760 SM00487 DEAD-like helicases superfamily NF53_RS07760 SM00491 NF53_RS07760 NF53_RS07785 SM00478 endonuclease III NF53_RS07795 SM00060 Fibronectin type 3 domain NF53_RS07845 SM00981 NF53_RS07845 NF53_RS07855 SM00491 NF53_RS07855 NF53_RS07910 SM00450 Rhodanese Homology Domain NF53_RS07940 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs NF53_RS07940 SM00475 5'-3' exonuclease NF53_RS08050 SM00357 Cold shock protein domain NF53_RS08100 SM00849 Metallo-beta-lactamase superfamily NF53_RS08105 SM00422 helix_turn_helix, mercury resistance NF53_RS08105 SM00871 Bacterial transcription activator, effector binding domain NF53_RS08180 SM00448 cheY-homologous receiver domain NF53_RS08185 SM00073 Histidine Phosphotransfer domain NF53_RS08185 SM00260 Two component signalling adaptor domain NF53_RS08185 SM00387 Histidine kinase-like ATPases NF53_RS08185 SM01231 NF53_RS08185 NF53_RS08205 SM00138 Methyltransferase, chemotaxis proteins NF53_RS08280 SM00382 ATPases associated with a variety of cellular activities NF53_RS08315 SM00260 Two component signalling adaptor domain NF53_RS08315 SM00448 cheY-homologous receiver domain NF53_RS08385 SM00382 ATPases associated with a variety of cellular activities NF53_RS08385 SM00962 SRP54-type protein, GTPase domain NF53_RS08395 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NF53_RS08440 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS08460 SM00382 ATPases associated with a variety of cellular activities NF53_RS08475 SM00849 Metallo-beta-lactamase superfamily NF53_RS08475 SM01027 Beta-Casp domain NF53_RS08500 SM00855 Phosphoglycerate mutase family NF53_RS08520 SM00347 helix_turn_helix multiple antibiotic resistance protein NF53_RS08560 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS08560 SM00895 NF53_RS08560 NF53_RS08575 SM00833 Cobalamin synthesis protein cobW C-terminal domain NF53_RS08600 SM00422 helix_turn_helix, mercury resistance NF53_RS08675 SM00028 Tetratricopeptide repeats NF53_RS08685 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS08720 SM00421 helix_turn_helix, Lux Regulon NF53_RS08720 SM00448 cheY-homologous receiver domain NF53_RS08730 SM00382 ATPases associated with a variety of cellular activities NF53_RS08750 SM00155 Phospholipase D. Active site motifs. NF53_RS08770 SM00919 Malic enzyme, NAD binding domain NF53_RS08770 SM01274 NF53_RS08770 NF53_RS08775 SM00387 Histidine kinase-like ATPases NF53_RS08780 SM00448 cheY-homologous receiver domain NF53_RS08785 SM00487 DEAD-like helicases superfamily NF53_RS08785 SM00490 helicase superfamily c-terminal domain NF53_RS08985 SM00854 Bacterial capsule synthesis protein PGA_cap NF53_RS09015 SM00850 LytTr DNA-binding domain NF53_RS09050 SM00448 cheY-homologous receiver domain NF53_RS09050 SM00862 Transcriptional regulatory protein, C terminal NF53_RS09055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS09055 SM00387 Histidine kinase-like ATPases NF53_RS09055 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS09070 SM00450 Rhodanese Homology Domain NF53_RS09135 SM01133 NF53_RS09135 NF53_RS09145 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain NF53_RS09185 SM01011 Aminopeptidase P, N-terminal domain NF53_RS09205 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain NF53_RS09205 SM00437 Bacterial DNA topoisomerase I DNA-binding domain NF53_RS09205 SM00493 NF53_RS09205 NF53_RS09295 SM00833 Cobalamin synthesis protein cobW C-terminal domain NF53_RS09305 SM00382 ATPases associated with a variety of cellular activities NF53_RS09310 SM00382 ATPases associated with a variety of cellular activities NF53_RS09345 SM00347 helix_turn_helix multiple antibiotic resistance protein NF53_RS09365 SM00382 ATPases associated with a variety of cellular activities NF53_RS09370 SM00382 ATPases associated with a variety of cellular activities NF53_RS09435 SM00287 Bacterial SH3 domain homologues NF53_RS09445 SM00382 ATPases associated with a variety of cellular activities NF53_RS09450 SM00448 cheY-homologous receiver domain NF53_RS09450 SM00862 Transcriptional regulatory protein, C terminal NF53_RS09455 SM00387 Histidine kinase-like ATPases NF53_RS09455 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS09525 SM00448 cheY-homologous receiver domain NF53_RS09525 SM00862 Transcriptional regulatory protein, C terminal NF53_RS09530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS09530 SM00387 Histidine kinase-like ATPases NF53_RS09530 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS09600 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS09625 SM00460 Transglutaminase/protease-like homologues NF53_RS09650 SM00966 SpoVT / AbrB like domain NF53_RS09690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NF53_RS09690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS09755 SM00833 Cobalamin synthesis protein cobW C-terminal domain NF53_RS09810 SM00855 Phosphoglycerate mutase family NF53_RS09860 SM00155 Phospholipase D. Active site motifs. NF53_RS09885 SM01091 Transporter associated domain NF53_RS09960 SM00244 prohibitin homologues NF53_RS09970 SM00855 Phosphoglycerate mutase family NF53_RS09990 SM01005 Alanine racemase, C-terminal domain NF53_RS10010 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS10175 SM00487 DEAD-like helicases superfamily NF53_RS10175 SM00490 helicase superfamily c-terminal domain NF53_RS10195 SM00829 Enoylreductase NF53_RS10215 SM00849 Metallo-beta-lactamase superfamily NF53_RS10230 SM00460 Transglutaminase/protease-like homologues NF53_RS10245 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NF53_RS10265 SM00100 Cyclic nucleotide-monophosphate binding domain NF53_RS10265 SM00419 helix_turn_helix, cAMP Regulatory protein NF53_RS10270 SM00729 Elongator protein 3, MiaB family, Radical SAM NF53_RS10280 SM00852 Probable molybdopterin binding domain NF53_RS10345 SM00894 Excalibur calcium-binding domain NF53_RS10395 SM00028 Tetratricopeptide repeats NF53_RS10425 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS10430 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS10535 SM00857 Resolvase, N terminal domain NF53_RS10685 SM00287 Bacterial SH3 domain homologues NF53_RS10685 SM00644 NF53_RS10685 NF53_RS10690 SM00028 Tetratricopeptide repeats NF53_RS10705 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NF53_RS10710 SM00382 ATPases associated with a variety of cellular activities NF53_RS10735 SM00567 E-Z type HEAT repeats NF53_RS10735 SM00932 Scaffold protein Nfu/NifU N terminal NF53_RS10755 SM00836 DALR anticodon binding domain NF53_RS10755 SM01016 Arginyl tRNA synthetase N terminal dom NF53_RS10775 SM00028 Tetratricopeptide repeats NF53_RS10855 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS10870 SM00382 ATPases associated with a variety of cellular activities NF53_RS10925 SM00563 Phosphate acyltransferases NF53_RS10985 SM00646 NF53_RS10985 NF53_RS11030 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NF53_RS11035 SM00421 helix_turn_helix, Lux Regulon NF53_RS11035 SM00448 cheY-homologous receiver domain NF53_RS11050 SM00829 Enoylreductase NF53_RS11075 SM01350 NF53_RS11075 NF53_RS11105 SM00382 ATPases associated with a variety of cellular activities NF53_RS11145 SM01091 Transporter associated domain NF53_RS11160 SM00387 Histidine kinase-like ATPases NF53_RS11160 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS11175 SM00882 Coenzyme A transferase NF53_RS11180 SM00882 Coenzyme A transferase NF53_RS11195 SM00382 ATPases associated with a variety of cellular activities NF53_RS11235 SM00219 Tyrosine kinase, catalytic domain NF53_RS11245 SM00014 Acid phosphatase homologues NF53_RS11425 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NF53_RS11445 SM00822 NF53_RS11445 NF53_RS11465 SM00823 Phosphopantetheine attachment site NF53_RS11465 SM00824 Thioesterase NF53_RS11470 SM00923 MbtH-like protein NF53_RS11490 SM00411 bacterial (prokaryotic) histone like domain NF53_RS11535 SM00363 S4 RNA-binding domain NF53_RS11540 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NF53_RS11545 SM00382 ATPases associated with a variety of cellular activities NF53_RS11580 SM00849 Metallo-beta-lactamase superfamily NF53_RS11585 SM00860 SMI1 / KNR4 family NF53_RS11610 SM00100 Cyclic nucleotide-monophosphate binding domain NF53_RS11625 SM00849 Metallo-beta-lactamase superfamily NF53_RS11645 SM01059 Chloramphenicol acetyltransferase NF53_RS11670 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS11705 SM00357 Cold shock protein domain NF53_RS11730 SM00859 Semialdehyde dehydrogenase, NAD binding domain NF53_RS11765 SM00382 ATPases associated with a variety of cellular activities NF53_RS11770 SM00382 ATPases associated with a variety of cellular activities NF53_RS11815 SM00835 Cupin NF53_RS11885 SM01207 NF53_RS11885 NF53_RS11900 SM00347 helix_turn_helix multiple antibiotic resistance protein NF53_RS11920 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS11925 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS11975 SM00487 DEAD-like helicases superfamily NF53_RS11975 SM00490 helicase superfamily c-terminal domain NF53_RS11995 SM00482 DNA polymerase A domain NF53_RS12075 SM00966 SpoVT / AbrB like domain NF53_RS12110 SM00857 Resolvase, N terminal domain NF53_RS12230 SM00644 NF53_RS12230 NF53_RS12245 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS12250 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS12285 SM00857 Resolvase, N terminal domain NF53_RS12295 SM00849 Metallo-beta-lactamase superfamily NF53_RS12300 SM00487 DEAD-like helicases superfamily NF53_RS12300 SM00490 helicase superfamily c-terminal domain NF53_RS12430 SM00347 helix_turn_helix multiple antibiotic resistance protein NF53_RS12435 SM00855 Phosphoglycerate mutase family NF53_RS12475 SM00421 helix_turn_helix, Lux Regulon NF53_RS12480 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS12485 SM00966 SpoVT / AbrB like domain NF53_RS12505 SM00936 Penicillin-binding protein 5, C-terminal domain NF53_RS12525 SM00823 Phosphopantetheine attachment site NF53_RS12530 SM00823 Phosphopantetheine attachment site NF53_RS12575 SM00047 Lysozyme subfamily 2 NF53_RS12655 SM00116 Domain in cystathionine beta-synthase and other proteins. NF53_RS12655 SM00924 MgtE intracellular N domain NF53_RS12705 SM00382 ATPases associated with a variety of cellular activities NF53_RS12735 SM00878 Biotin carboxylase C-terminal domain NF53_RS12805 SM00387 Histidine kinase-like ATPases NF53_RS12805 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS12810 SM00448 cheY-homologous receiver domain NF53_RS12810 SM00862 Transcriptional regulatory protein, C terminal NF53_RS12845 SM00342 helix_turn_helix, arabinose operon control protein NF53_RS12875 SM00382 ATPases associated with a variety of cellular activities NF53_RS12895 SM00422 helix_turn_helix, mercury resistance NF53_RS12895 SM00871 Bacterial transcription activator, effector binding domain NF53_RS12945 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS13010 SM00448 cheY-homologous receiver domain NF53_RS13010 SM00862 Transcriptional regulatory protein, C terminal NF53_RS13015 SM00387 Histidine kinase-like ATPases NF53_RS13020 SM00382 ATPases associated with a variety of cellular activities NF53_RS13030 SM00382 ATPases associated with a variety of cellular activities NF53_RS13060 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS13065 SM01209 NF53_RS13065 NF53_RS13175 SM00091 PAS domain NF53_RS13175 SM00387 Histidine kinase-like ATPases NF53_RS13175 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS13205 SM00382 ATPases associated with a variety of cellular activities NF53_RS13215 SM00387 Histidine kinase-like ATPases NF53_RS13215 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS13260 SM00448 cheY-homologous receiver domain NF53_RS13260 SM00862 Transcriptional regulatory protein, C terminal NF53_RS13265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS13265 SM00387 Histidine kinase-like ATPases NF53_RS13265 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS13270 SM00829 Enoylreductase NF53_RS13275 SM00014 Acid phosphatase homologues NF53_RS13280 SM00740 NF53_RS13280 NF53_RS13345 SM00287 Bacterial SH3 domain homologues NF53_RS13360 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS13425 SM00480 DNA polymerase III beta subunit NF53_RS13510 SM00465 GIY-YIG type nucleases (URI domain) NF53_RS13580 SM00448 cheY-homologous receiver domain NF53_RS13580 SM00862 Transcriptional regulatory protein, C terminal NF53_RS13585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS13585 SM00387 Histidine kinase-like ATPases NF53_RS13585 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS13600 SM00382 ATPases associated with a variety of cellular activities NF53_RS13635 SM00642 Alpha-amylase domain NF53_RS13655 SM00871 Bacterial transcription activator, effector binding domain NF53_RS13670 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS13795 SM00382 ATPases associated with a variety of cellular activities NF53_RS13815 SM00420 helix_turn_helix, Deoxyribose operon repressor NF53_RS13815 SM01134 NF53_RS13815 NF53_RS13855 SM00861 Transketolase, pyrimidine binding domain NF53_RS13915 SM00116 Domain in cystathionine beta-synthase and other proteins. NF53_RS13915 SM00382 ATPases associated with a variety of cellular activities NF53_RS13950 SM00060 Fibronectin type 3 domain NF53_RS13950 SM00495 Chitin-binding domain type 3 NF53_RS14045 SM00341 Helicase and RNase D C-terminal NF53_RS14045 SM00487 DEAD-like helicases superfamily NF53_RS14045 SM00490 helicase superfamily c-terminal domain NF53_RS14045 SM00956 NF53_RS14045 NF53_RS14070 SM00646 NF53_RS14070 NF53_RS14085 SM01131 NF53_RS14085 NF53_RS14100 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NF53_RS14125 SM01130 NF53_RS14125 NF53_RS14145 SM00091 PAS domain NF53_RS14145 SM00382 ATPases associated with a variety of cellular activities NF53_RS14215 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NF53_RS14240 SM00248 ankyrin repeats NF53_RS14265 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain NF53_RS14275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS14275 SM00387 Histidine kinase-like ATPases NF53_RS14275 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS14280 SM00448 cheY-homologous receiver domain NF53_RS14280 SM00862 Transcriptional regulatory protein, C terminal NF53_RS14545 SM00062 Bacterial periplasmic substrate-binding proteins NF53_RS14550 SM00382 ATPases associated with a variety of cellular activities NF53_RS14565 SM00028 Tetratricopeptide repeats NF53_RS14645 SM00382 ATPases associated with a variety of cellular activities NF53_RS14685 SM00830 Chorismate mutase type II NF53_RS14725 SM00860 SMI1 / KNR4 family NF53_RS14730 SM00287 Bacterial SH3 domain homologues NF53_RS14785 SM00382 ATPases associated with a variety of cellular activities NF53_RS14805 SM01133 NF53_RS14805 NF53_RS14820 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NF53_RS14840 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase NF53_RS14855 SM00346 helix_turn_helix isocitrate lyase regulation NF53_RS14885 SM00098 Alkaline phosphatase homologues NF53_RS14895 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS15010 SM01060 NF53_RS15010 NF53_RS15095 SM00347 helix_turn_helix multiple antibiotic resistance protein NF53_RS15100 SM00889 Elongation factor G, domain IV NF53_RS15115 SM00773 Proposed nucleic acid binding domain NF53_RS15120 SM00860 SMI1 / KNR4 family NF53_RS15130 SM00382 ATPases associated with a variety of cellular activities NF53_RS15155 SM00342 helix_turn_helix, arabinose operon control protein NF53_RS15155 SM00871 Bacterial transcription activator, effector binding domain NF53_RS15185 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS15200 SM00387 Histidine kinase-like ATPases NF53_RS15200 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS15205 SM00448 cheY-homologous receiver domain NF53_RS15205 SM00862 Transcriptional regulatory protein, C terminal NF53_RS15340 SM00797 Allophanate hydrolase subunit 2 NF53_RS15345 SM00796 Allophanate hydrolase subunit 1 NF53_RS15350 SM00346 helix_turn_helix isocitrate lyase regulation NF53_RS15365 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NF53_RS15485 SM00849 Metallo-beta-lactamase superfamily NF53_RS15520 SM00870 NF53_RS15520 NF53_RS15525 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS15550 SM00387 Histidine kinase-like ATPases NF53_RS15550 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS15555 SM00448 cheY-homologous receiver domain NF53_RS15555 SM00862 Transcriptional regulatory protein, C terminal NF53_RS15565 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NF53_RS15565 SM00091 PAS domain NF53_RS15565 SM00387 Histidine kinase-like ATPases NF53_RS15565 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS15590 SM00342 helix_turn_helix, arabinose operon control protein NF53_RS15605 SM00465 GIY-YIG type nucleases (URI domain) NF53_RS15635 SM00448 cheY-homologous receiver domain NF53_RS15640 SM00387 Histidine kinase-like ATPases NF53_RS15725 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NF53_RS15795 SM00347 helix_turn_helix multiple antibiotic resistance protein NF53_RS15805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS15805 SM00387 Histidine kinase-like ATPases NF53_RS15805 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS15810 SM00448 cheY-homologous receiver domain NF53_RS15810 SM00862 Transcriptional regulatory protein, C terminal NF53_RS15880 SM00646 NF53_RS15880 NF53_RS15885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS15885 SM00387 Histidine kinase-like ATPases NF53_RS15885 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS15890 SM00448 cheY-homologous receiver domain NF53_RS15890 SM00862 Transcriptional regulatory protein, C terminal NF53_RS15915 SM01058 CarD-like/TRCF domain NF53_RS15935 SM00155 Phospholipase D. Active site motifs. NF53_RS15960 SM00226 Low molecular weight phosphatase family NF53_RS15975 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NF53_RS16085 SM00421 helix_turn_helix, Lux Regulon NF53_RS16085 SM00448 cheY-homologous receiver domain NF53_RS16155 SM00382 ATPases associated with a variety of cellular activities NF53_RS16165 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NF53_RS16175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS16175 SM00387 Histidine kinase-like ATPases NF53_RS16175 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS16180 SM00448 cheY-homologous receiver domain NF53_RS16180 SM00862 Transcriptional regulatory protein, C terminal NF53_RS16250 SM00644 NF53_RS16250 NF53_RS16340 SM00857 Resolvase, N terminal domain NF53_RS16405 SM00854 Bacterial capsule synthesis protein PGA_cap NF53_RS16430 SM00347 helix_turn_helix multiple antibiotic resistance protein NF53_RS16485 SM00382 ATPases associated with a variety of cellular activities NF53_RS16600 SM00382 ATPases associated with a variety of cellular activities NF53_RS16615 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS16705 SM00028 Tetratricopeptide repeats NF53_RS16730 SM01091 Transporter associated domain NF53_RS16735 SM00422 helix_turn_helix, mercury resistance NF53_RS16815 SM01350 NF53_RS16815 NF53_RS16820 SM00861 Transketolase, pyrimidine binding domain NF53_RS16835 SM00829 Enoylreductase NF53_RS16845 SM01276 NF53_RS16845 NF53_RS16850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NF53_RS16850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS16910 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NF53_RS16920 SM00914 NF53_RS16920 NF53_RS16940 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS16940 SM00866 NF53_RS16940 NF53_RS16965 SM00849 Metallo-beta-lactamase superfamily NF53_RS17010 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NF53_RS17015 SM00636 NF53_RS17015 NF53_RS17055 SM00871 Bacterial transcription activator, effector binding domain NF53_RS17060 SM00420 helix_turn_helix, Deoxyribose operon repressor NF53_RS17070 SM00382 ATPases associated with a variety of cellular activities NF53_RS17090 SM00849 Metallo-beta-lactamase superfamily NF53_RS17095 SM00641 Glycosyl hydrolases family 25 NF53_RS17155 SM00849 Metallo-beta-lactamase superfamily NF53_RS17265 SM00829 Enoylreductase NF53_RS17280 SM00855 Phosphoglycerate mutase family NF53_RS17290 SM00533 DNA-binding domain of DNA mismatch repair MUTS family NF53_RS17290 SM00534 ATPase domain of DNA mismatch repair MUTS family NF53_RS17300 SM00642 Alpha-amylase domain NF53_RS17355 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NF53_RS17360 SM00829 Enoylreductase NF53_RS17370 SM00028 Tetratricopeptide repeats NF53_RS17430 SM00450 Rhodanese Homology Domain NF53_RS17430 SM00849 Metallo-beta-lactamase superfamily NF53_RS17465 SM00028 Tetratricopeptide repeats NF53_RS17475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NF53_RS17475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS17475 SM00319 Homologues of the ligand binding domain of Tar NF53_RS17610 SM00257 Lysin motif NF53_RS17720 SM00306 Hint (Hedgehog/Intein) domain N-terminal region NF53_RS17790 SM00387 Histidine kinase-like ATPases NF53_RS17790 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS17795 SM00387 Histidine kinase-like ATPases NF53_RS17795 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS17800 SM00448 cheY-homologous receiver domain NF53_RS17800 SM00862 Transcriptional regulatory protein, C terminal NF53_RS17855 SM00287 Bacterial SH3 domain homologues NF53_RS17855 SM00644 NF53_RS17855 NF53_RS17910 SM00052 Putative diguanylate phosphodiesterase NF53_RS17910 SM00091 PAS domain NF53_RS17910 SM00267 diguanylate cyclase NF53_RS17915 SM00382 ATPases associated with a variety of cellular activities NF53_RS17940 SM00387 Histidine kinase-like ATPases NF53_RS17940 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS17945 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NF53_RS17990 SM00479 NF53_RS17990 NF53_RS17995 SM00357 Cold shock protein domain NF53_RS18020 SM01022 NF53_RS18020 NF53_RS18130 SM00852 Probable molybdopterin binding domain NF53_RS18145 SM00729 Elongator protein 3, MiaB family, Radical SAM NF53_RS18165 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NF53_RS18165 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NF53_RS18265 SM00382 ATPases associated with a variety of cellular activities NF53_RS18280 SM00434 DNA Topoisomerase IV NF53_RS18285 SM00387 Histidine kinase-like ATPases NF53_RS18285 SM00433 TopoisomeraseII NF53_RS18295 SM00881 CoA binding domain NF53_RS18300 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NF53_RS18305 SM00448 cheY-homologous receiver domain NF53_RS18305 SM00862 Transcriptional regulatory protein, C terminal NF53_RS18320 SM01207 NF53_RS18320 NF53_RS18335 SM00257 Lysin motif NF53_RS18335 SM00636 NF53_RS18335 NF53_RS18355 SM00479 NF53_RS18355 NF53_RS18375 SM00382 ATPases associated with a variety of cellular activities NF53_RS18420 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NF53_RS18455 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS18495 SM00644 NF53_RS18495 NF53_RS18495 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. NF53_RS18500 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain NF53_RS18515 SM00091 PAS domain NF53_RS18515 SM00387 Histidine kinase-like ATPases NF53_RS18515 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS18550 SM01058 CarD-like/TRCF domain NF53_RS18635 SM00382 ATPases associated with a variety of cellular activities NF53_RS18695 SM00287 Bacterial SH3 domain homologues NF53_RS18695 SM00641 Glycosyl hydrolases family 25 NF53_RS18700 SM00382 ATPases associated with a variety of cellular activities NF53_RS18705 SM00382 ATPases associated with a variety of cellular activities NF53_RS18720 SM00861 Transketolase, pyrimidine binding domain NF53_RS18735 SM00382 ATPases associated with a variety of cellular activities NF53_RS18740 SM00062 Bacterial periplasmic substrate-binding proteins NF53_RS18755 SM00857 Resolvase, N terminal domain NF53_RS18780 SM01230 NF53_RS18780 NF53_RS18785 SM00422 helix_turn_helix, mercury resistance NF53_RS18810 SM00382 ATPases associated with a variety of cellular activities NF53_RS18840 SM00287 Bacterial SH3 domain homologues NF53_RS18855 SM00420 helix_turn_helix, Deoxyribose operon repressor NF53_RS18855 SM01134 NF53_RS18855 NF53_RS18885 SM00636 NF53_RS18885 NF53_RS18900 SM00411 bacterial (prokaryotic) histone like domain NF53_RS18940 SM00382 ATPases associated with a variety of cellular activities NF53_RS18960 SM00342 helix_turn_helix, arabinose operon control protein NF53_RS18970 SM00478 endonuclease III NF53_RS19000 SM00052 Putative diguanylate phosphodiesterase NF53_RS19000 SM00091 PAS domain NF53_RS19000 SM00267 diguanylate cyclase NF53_RS19050 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS19060 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS19060 SM00866 NF53_RS19060 NF53_RS19070 SM00148 Phospholipase C, catalytic domain (part); domain X NF53_RS19080 SM00257 Lysin motif NF53_RS19105 SM00853 MutL C terminal dimerisation domain NF53_RS19105 SM01340 NF53_RS19105 NF53_RS19110 SM00533 DNA-binding domain of DNA mismatch repair MUTS family NF53_RS19110 SM00534 ATPase domain of DNA mismatch repair MUTS family NF53_RS19125 SM00729 Elongator protein 3, MiaB family, Radical SAM NF53_RS19155 SM00322 K homology RNA-binding domain NF53_RS19155 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NF53_RS19165 SM00382 ATPases associated with a variety of cellular activities NF53_RS19170 SM00852 Probable molybdopterin binding domain NF53_RS19220 SM00382 ATPases associated with a variety of cellular activities NF53_RS19230 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS19230 SM00866 NF53_RS19230 NF53_RS19235 SM00382 ATPases associated with a variety of cellular activities NF53_RS19235 SM00843 NF53_RS19235 NF53_RS19250 SM00849 Metallo-beta-lactamase superfamily NF53_RS19260 SM01130 NF53_RS19260 NF53_RS19270 SM00859 Semialdehyde dehydrogenase, NAD binding domain NF53_RS19290 SM00644 NF53_RS19290 NF53_RS19385 SM00507 HNH nucleases NF53_RS19390 SM00220 Serine/Threonine protein kinases, catalytic domain NF53_RS19405 SM00357 Cold shock protein domain NF53_RS19480 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS19485 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS19505 SM00857 Resolvase, N terminal domain NF53_RS19535 SM00316 Ribosomal protein S1-like RNA-binding domain NF53_RS19535 SM00322 K homology RNA-binding domain NF53_RS19540 SM01387 NF53_RS19540 NF53_RS19545 SM00904 Riboflavin kinase NF53_RS19580 SM00316 Ribosomal protein S1-like RNA-binding domain NF53_RS19580 SM00322 K homology RNA-binding domain NF53_RS19590 SM00479 NF53_RS19590 NF53_RS19590 SM00481 DNA polymerase alpha chain like domain NF53_RS19600 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NF53_RS19645 SM00382 ATPases associated with a variety of cellular activities NF53_RS19645 SM01086 C-terminal, D2-small domain, of ClpB protein NF53_RS19665 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain NF53_RS19665 SM00437 Bacterial DNA topoisomerase I DNA-binding domain NF53_RS19665 SM00493 NF53_RS19665 NF53_RS19675 SM00881 CoA binding domain NF53_RS19725 SM00382 ATPases associated with a variety of cellular activities NF53_RS19725 SM00962 SRP54-type protein, GTPase domain NF53_RS19725 SM00963 SRP54-type protein, helical bundle domain NF53_RS19735 SM00382 ATPases associated with a variety of cellular activities NF53_RS19735 SM00962 SRP54-type protein, GTPase domain NF53_RS19735 SM00963 SRP54-type protein, helical bundle domain NF53_RS19740 SM00968 SMC proteins Flexible Hinge Domain NF53_RS19745 SM00358 Double-stranded RNA binding motif NF53_RS19745 SM00535 Ribonuclease III family NF53_RS19755 SM00822 NF53_RS19755 NF53_RS19760 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. NF53_RS19775 SM00487 DEAD-like helicases superfamily NF53_RS19775 SM00490 helicase superfamily c-terminal domain NF53_RS19780 SM01120 NF53_RS19780 NF53_RS19780 SM01121 NF53_RS19780 NF53_RS19800 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain NF53_RS19815 SM00220 Serine/Threonine protein kinases, catalytic domain NF53_RS19815 SM00740 NF53_RS19815 NF53_RS19820 SM00331 Sigma factor PP2C-like phosphatases NF53_RS19820 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain NF53_RS19845 SM00487 DEAD-like helicases superfamily NF53_RS19845 SM00490 helicase superfamily c-terminal domain NF53_RS19855 SM01409 NF53_RS19855 NF53_RS19860 SM00072 Guanylate kinase homologues. NF53_RS19875 SM00831 Cation transporter/ATPase, N-terminus NF53_RS19915 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family NF53_RS19930 SM00851 MGS-like domain NF53_RS19930 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NF53_RS19930 SM01209 NF53_RS19930 NF53_RS19935 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain NF53_RS19960 SM00363 S4 RNA-binding domain NF53_RS19985 SM00363 S4 RNA-binding domain NF53_RS20030 SM00864 Tubulin/FtsZ family, GTPase domain NF53_RS20030 SM00865 Tubulin/FtsZ family, C-terminal domain NF53_RS20035 SM00842 Cell division protein FtsA NF53_RS20075 SM00740 NF53_RS20075 NF53_RS20080 SM00740 NF53_RS20080 NF53_RS20110 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains NF53_RS20130 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NF53_RS20170 SM00855 Phosphoglycerate mutase family NF53_RS20235 SM00878 Biotin carboxylase C-terminal domain NF53_RS20255 SM00670 Large family of predicted nucleotide-binding domains NF53_RS20280 SM00838 Elongation factor G C-terminus NF53_RS20360 SM00861 Transketolase, pyrimidine binding domain NF53_RS20390 SM00849 Metallo-beta-lactamase superfamily NF53_RS20455 SM00052 Putative diguanylate phosphodiesterase NF53_RS20545 SM00387 Histidine kinase-like ATPases NF53_RS20545 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS20560 SM00354 helix_turn _helix lactose operon repressor NF53_RS20580 SM00642 Alpha-amylase domain NF53_RS20585 SM00642 Alpha-amylase domain NF53_RS20590 SM00382 ATPases associated with a variety of cellular activities NF53_RS20625 SM00382 ATPases associated with a variety of cellular activities NF53_RS20710 SM01007 Class II Aldolase and Adducin N-terminal domain NF53_RS20740 SM00267 diguanylate cyclase NF53_RS20775 SM01061 CAT RNA binding domain NF53_RS20785 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS20785 SM00866 NF53_RS20785 NF53_RS20800 SM00849 Metallo-beta-lactamase superfamily NF53_RS20900 SM00387 Histidine kinase-like ATPases NF53_RS20910 SM00936 Penicillin-binding protein 5, C-terminal domain NF53_RS20915 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS20920 SM00382 ATPases associated with a variety of cellular activities NF53_RS20935 SM00347 helix_turn_helix multiple antibiotic resistance protein NF53_RS20955 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain NF53_RS21050 SM00354 helix_turn _helix lactose operon repressor NF53_RS21070 SM00704 CDGSH-type zinc finger. Function unknown. NF53_RS21100 SM00729 Elongator protein 3, MiaB family, Radical SAM NF53_RS21100 SM00876 Biotin and Thiamin Synthesis associated domain NF53_RS21150 SM00347 helix_turn_helix multiple antibiotic resistance protein NF53_RS21185 SM00859 Semialdehyde dehydrogenase, NAD binding domain NF53_RS21200 SM00849 Metallo-beta-lactamase superfamily NF53_RS21220 SM00849 Metallo-beta-lactamase superfamily NF53_RS21235 SM00831 Cation transporter/ATPase, N-terminus NF53_RS21275 SM00382 ATPases associated with a variety of cellular activities NF53_RS21285 SM00062 Bacterial periplasmic substrate-binding proteins NF53_RS21285 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. NF53_RS21330 SM00861 Transketolase, pyrimidine binding domain NF53_RS21350 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NF53_RS21365 SM00091 PAS domain NF53_RS21365 SM00382 ATPases associated with a variety of cellular activities NF53_RS21390 SM00448 cheY-homologous receiver domain NF53_RS21400 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NF53_RS21415 SM00363 S4 RNA-binding domain NF53_RS21420 SM00861 Transketolase, pyrimidine binding domain NF53_RS21455 SM00878 Biotin carboxylase C-terminal domain NF53_RS21505 SM00382 ATPases associated with a variety of cellular activities NF53_RS21525 SM00841 Elongation factor P, C-terminal NF53_RS21525 SM01185 NF53_RS21525 NF53_RS21560 SM00529 Helix-turn-helix diphteria tox regulatory element NF53_RS21585 SM00450 Rhodanese Homology Domain NF53_RS21595 SM00354 helix_turn _helix lactose operon repressor NF53_RS21655 SM00487 DEAD-like helicases superfamily NF53_RS21655 SM00490 helicase superfamily c-terminal domain NF53_RS21690 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. NF53_RS21725 SM00382 ATPases associated with a variety of cellular activities NF53_RS21780 SM01018 B12 binding domain NF53_RS21810 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NF53_RS21820 SM00849 Metallo-beta-lactamase superfamily NF53_RS21860 SM00382 ATPases associated with a variety of cellular activities NF53_RS21925 SM00382 ATPases associated with a variety of cellular activities NF53_RS21940 SM00518 AP endonuclease family 2 NF53_RS21945 SM00487 DEAD-like helicases superfamily NF53_RS21945 SM00490 helicase superfamily c-terminal domain NF53_RS21980 SM00400 zinc finger NF53_RS21980 SM00493 NF53_RS21980 NF53_RS21980 SM00766 DNA primase DnaG DnaB-binding NF53_RS21995 SM00116 Domain in cystathionine beta-synthase and other proteins. NF53_RS22030 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NF53_RS22060 SM00729 Elongator protein 3, MiaB family, Radical SAM NF53_RS22075 SM00271 DnaJ molecular chaperone homology domain NF53_RS22095 SM00729 Elongator protein 3, MiaB family, Radical SAM NF53_RS22105 SM00838 Elongation factor G C-terminus NF53_RS22135 SM00849 Metallo-beta-lactamase superfamily NF53_RS22145 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NF53_RS22165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NF53_RS22175 SM01103 NF53_RS22175 NF53_RS22230 SM00954 Region found in RelA / SpoT proteins NF53_RS22240 SM00098 Alkaline phosphatase homologues NF53_RS22265 SM00855 Phosphoglycerate mutase family NF53_RS22315 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS22340 SM00382 ATPases associated with a variety of cellular activities NF53_RS22440 SM00732 Likely ribonuclease with RNase H fold. NF53_RS22450 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NF53_RS22485 SM00028 Tetratricopeptide repeats NF53_RS22505 SM00382 ATPases associated with a variety of cellular activities NF53_RS22545 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NF53_RS22545 SM00954 Region found in RelA / SpoT proteins NF53_RS22590 SM01323 NF53_RS22590 NF53_RS22610 SM00382 ATPases associated with a variety of cellular activities NF53_RS22615 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NF53_RS22640 SM00257 Lysin motif NF53_RS22695 SM00382 ATPases associated with a variety of cellular activities NF53_RS22700 SM00387 Histidine kinase-like ATPases NF53_RS22705 SM00448 cheY-homologous receiver domain NF53_RS22705 SM00862 Transcriptional regulatory protein, C terminal NF53_RS22715 SM01317 NF53_RS22715 NF53_RS22805 SM00257 Lysin motif NF53_RS22815 SM01004 Delta-aminolevulinic acid dehydratase NF53_RS22840 SM00347 helix_turn_helix multiple antibiotic resistance protein NF53_RS22855 SM00382 ATPases associated with a variety of cellular activities NF53_RS22855 SM00464 Found in ATP-dependent protease La (LON) NF53_RS22860 SM00382 ATPases associated with a variety of cellular activities NF53_RS22865 SM00382 ATPases associated with a variety of cellular activities NF53_RS22865 SM00994 ClpX C4-type zinc finger NF53_RS22865 SM01086 C-terminal, D2-small domain, of ClpB protein NF53_RS22920 SM00909 Sporulation and spore germination NF53_RS22935 SM00421 helix_turn_helix, Lux Regulon NF53_RS22955 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS22980 SM00382 ATPases associated with a variety of cellular activities NF53_RS23030 SM00465 GIY-YIG type nucleases (URI domain) NF53_RS23040 SM00893 Electron transfer flavoprotein domain NF53_RS23045 SM00893 Electron transfer flavoprotein domain NF53_RS23115 SM00382 ATPases associated with a variety of cellular activities NF53_RS23120 SM00387 Histidine kinase-like ATPases NF53_RS23120 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS23125 SM00448 cheY-homologous receiver domain NF53_RS23125 SM00862 Transcriptional regulatory protein, C terminal NF53_RS23140 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase NF53_RS23155 SM00382 ATPases associated with a variety of cellular activities NF53_RS23170 SM00725 NEAr Transporter domain NF53_RS23175 SM00725 NEAr Transporter domain NF53_RS23180 SM00725 NEAr Transporter domain NF53_RS23190 SM00363 S4 RNA-binding domain NF53_RS23200 SM00463 Small MutS-related domain NF53_RS23200 SM00533 DNA-binding domain of DNA mismatch repair MUTS family NF53_RS23200 SM00534 ATPase domain of DNA mismatch repair MUTS family NF53_RS23205 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NF53_RS23205 SM00481 DNA polymerase alpha chain like domain NF53_RS23205 SM00483 DNA polymerase X family NF53_RS23245 SM00873 B3/4 domain NF53_RS23245 SM00874 tRNA synthetase B5 domain NF53_RS23245 SM00896 Ferredoxin-fold anticodon binding domain NF53_RS23255 SM00967 RNA 2'-O ribose methyltransferase substrate binding NF53_RS23325 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NF53_RS23340 SM00382 ATPases associated with a variety of cellular activities NF53_RS23360 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NF53_RS23375 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain NF53_RS23375 SM01232 NF53_RS23375 NF53_RS23380 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs NF53_RS23380 SM00474 3'-5' exonuclease NF53_RS23380 SM00475 5'-3' exonuclease NF53_RS23380 SM00482 DNA polymerase A domain NF53_RS23385 SM00091 PAS domain NF53_RS23385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS23385 SM00387 Histidine kinase-like ATPases NF53_RS23385 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS23390 SM00448 cheY-homologous receiver domain NF53_RS23390 SM00862 Transcriptional regulatory protein, C terminal NF53_RS23405 SM01329 NF53_RS23405 NF53_RS23455 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS23460 SM00919 Malic enzyme, NAD binding domain NF53_RS23460 SM01274 NF53_RS23460 NF53_RS23465 SM00481 DNA polymerase alpha chain like domain NF53_RS23495 SM00116 Domain in cystathionine beta-synthase and other proteins. NF53_RS23505 SM00849 Metallo-beta-lactamase superfamily NF53_RS23555 SM01002 Alanine dehydrogenase/PNT, C-terminal domain NF53_RS23555 SM01003 Alanine dehydrogenase/PNT, N-terminal domain NF53_RS23670 SM00981 NF53_RS23670 NF53_RS23710 SM00363 S4 RNA-binding domain NF53_RS23710 SM01390 NF53_RS23710 NF53_RS23760 SM00363 S4 RNA-binding domain NF53_RS23780 SM01266 NF53_RS23780 NF53_RS23795 SM00116 Domain in cystathionine beta-synthase and other proteins. NF53_RS23815 SM00448 cheY-homologous receiver domain NF53_RS23815 SM00862 Transcriptional regulatory protein, C terminal NF53_RS23820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS23820 SM00387 Histidine kinase-like ATPases NF53_RS23820 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS23825 SM00248 ankyrin repeats NF53_RS23850 SM00354 helix_turn _helix lactose operon repressor NF53_RS23860 SM00830 Chorismate mutase type II NF53_RS23910 SM00382 ATPases associated with a variety of cellular activities NF53_RS23910 SM00843 NF53_RS23910 NF53_RS23915 SM00646 NF53_RS23915 NF53_RS23955 SM00849 Metallo-beta-lactamase superfamily NF53_RS23975 SM00642 Alpha-amylase domain NF53_RS23990 SM00420 helix_turn_helix, Deoxyribose operon repressor NF53_RS23995 SM00363 S4 RNA-binding domain NF53_RS24015 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NF53_RS24040 SM01058 CarD-like/TRCF domain NF53_RS24075 SM00852 Probable molybdopterin binding domain NF53_RS24090 SM00729 Elongator protein 3, MiaB family, Radical SAM NF53_RS24110 SM00450 Rhodanese Homology Domain NF53_RS24190 SM00382 ATPases associated with a variety of cellular activities NF53_RS24210 SM00729 Elongator protein 3, MiaB family, Radical SAM NF53_RS24220 SM00382 ATPases associated with a variety of cellular activities NF53_RS24275 SM00014 Acid phosphatase homologues NF53_RS24290 SM00852 Probable molybdopterin binding domain NF53_RS24345 SM00387 Histidine kinase-like ATPases NF53_RS24350 SM00387 Histidine kinase-like ATPases NF53_RS24350 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS24380 SM00382 ATPases associated with a variety of cellular activities NF53_RS24445 SM01234 NF53_RS24445 NF53_RS24450 SM00947 Carbonic anhydrase NF53_RS24515 SM00899 NF53_RS24515 NF53_RS24525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS24525 SM00387 Histidine kinase-like ATPases NF53_RS24525 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS24530 SM00448 cheY-homologous receiver domain NF53_RS24530 SM00862 Transcriptional regulatory protein, C terminal NF53_RS24560 SM00046 Diacylglycerol kinase catalytic domain (presumed) NF53_RS24620 SM00382 ATPases associated with a variety of cellular activities NF53_RS24625 SM00342 helix_turn_helix, arabinose operon control protein NF53_RS24625 SM00871 Bacterial transcription activator, effector binding domain NF53_RS24635 SM00382 ATPases associated with a variety of cellular activities NF53_RS24645 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NF53_RS24650 SM00448 cheY-homologous receiver domain NF53_RS24650 SM00862 Transcriptional regulatory protein, C terminal NF53_RS24655 SM00387 Histidine kinase-like ATPases NF53_RS24670 SM00382 ATPases associated with a variety of cellular activities NF53_RS24690 SM00345 helix_turn_helix gluconate operon transcriptional repressor NF53_RS24690 SM00866 NF53_RS24690 NF53_RS24720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS24720 SM00387 Histidine kinase-like ATPases NF53_RS24720 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS24725 SM00448 cheY-homologous receiver domain NF53_RS24725 SM00862 Transcriptional regulatory protein, C terminal NF53_RS24730 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NF53_RS24770 SM00357 Cold shock protein domain NF53_RS24815 SM00642 Alpha-amylase domain NF53_RS24985 SM00316 Ribosomal protein S1-like RNA-binding domain NF53_RS24995 SM00344 helix_turn_helix ASNC type NF53_RS25030 SM01298 NF53_RS25030 NF53_RS25035 SM00479 NF53_RS25035 NF53_RS25150 SM00871 Bacterial transcription activator, effector binding domain NF53_RS25200 SM00382 ATPases associated with a variety of cellular activities NF53_RS25230 SM00860 SMI1 / KNR4 family NF53_RS25360 SM00422 helix_turn_helix, mercury resistance NF53_RS25375 SM00855 Phosphoglycerate mutase family NF53_RS25385 SM00729 Elongator protein 3, MiaB family, Radical SAM NF53_RS25430 SM00382 ATPases associated with a variety of cellular activities NF53_RS25445 SM00382 ATPases associated with a variety of cellular activities NF53_RS25445 SM00930 NF53_RS25445 NF53_RS25465 SM00493 NF53_RS25465 NF53_RS25515 SM00849 Metallo-beta-lactamase superfamily NF53_RS25560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NF53_RS25560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS25635 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS25655 SM00448 cheY-homologous receiver domain NF53_RS25655 SM00862 Transcriptional regulatory protein, C terminal NF53_RS25660 SM00387 Histidine kinase-like ATPases NF53_RS25660 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS25685 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NF53_RS25685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS25690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NF53_RS25690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS25710 SM00347 helix_turn_helix multiple antibiotic resistance protein NF53_RS25805 SM01276 NF53_RS25805 NF53_RS25840 SM00363 S4 RNA-binding domain NF53_RS25850 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain NF53_RS25855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NF53_RS25890 SM00382 ATPases associated with a variety of cellular activities NF53_RS25925 SM00382 ATPases associated with a variety of cellular activities NF53_RS25945 SM00448 cheY-homologous receiver domain NF53_RS25945 SM00862 Transcriptional regulatory protein, C terminal NF53_RS25960 SM00316 Ribosomal protein S1-like RNA-binding domain NF53_RS25960 SM00357 Cold shock protein domain NF53_RS25960 SM00955 NF53_RS25960 NF53_RS25990 SM01192 NF53_RS25990 NF53_RS25990 SM01193 NF53_RS25990 NF53_RS26010 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NF53_RS26115 SM00028 Tetratricopeptide repeats NF53_RS26155 SM00487 DEAD-like helicases superfamily NF53_RS26155 SM00490 helicase superfamily c-terminal domain NF53_RS26170 SM00422 helix_turn_helix, mercury resistance NF53_RS26180 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS26195 SM00422 helix_turn_helix, mercury resistance NF53_RS26205 SM00382 ATPases associated with a variety of cellular activities NF53_RS26215 SM00382 ATPases associated with a variety of cellular activities NF53_RS26225 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NF53_RS26225 SM00245 tail specific protease NF53_RS26235 SM00382 ATPases associated with a variety of cellular activities NF53_RS26250 SM00937 NF53_RS26250 NF53_RS26255 SM00957 SecA DEAD-like domain NF53_RS26255 SM00958 SecA preprotein cross-linking domain NF53_RS26265 SM00382 ATPases associated with a variety of cellular activities NF53_RS26300 SM00357 Cold shock protein domain NF53_RS26310 SM00487 DEAD-like helicases superfamily NF53_RS26310 SM00490 helicase superfamily c-terminal domain NF53_RS26345 SM00984 UDP binding domain NF53_RS26360 SM00382 ATPases associated with a variety of cellular activities NF53_RS26365 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. NF53_RS26500 SM00287 Bacterial SH3 domain homologues NF53_RS26530 SM00287 Bacterial SH3 domain homologues NF53_RS26560 SM00487 DEAD-like helicases superfamily NF53_RS26560 SM00490 helicase superfamily c-terminal domain NF53_RS26605 SM00382 ATPases associated with a variety of cellular activities NF53_RS26630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS26630 SM00387 Histidine kinase-like ATPases NF53_RS26630 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS26635 SM00448 cheY-homologous receiver domain NF53_RS26635 SM00862 Transcriptional regulatory protein, C terminal NF53_RS26715 SM01002 Alanine dehydrogenase/PNT, C-terminal domain NF53_RS26715 SM01003 Alanine dehydrogenase/PNT, N-terminal domain NF53_RS26730 SM00984 UDP binding domain NF53_RS26795 SM00382 ATPases associated with a variety of cellular activities NF53_RS26800 SM00850 LytTr DNA-binding domain NF53_RS26880 SM00052 Putative diguanylate phosphodiesterase NF53_RS26880 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NF53_RS26880 SM00091 PAS domain NF53_RS26880 SM00267 diguanylate cyclase NF53_RS26900 SM00382 ATPases associated with a variety of cellular activities NF53_RS26970 SM00226 Low molecular weight phosphatase family NF53_RS26985 SM00903 Flavin reductase like domain NF53_RS27020 SM00937 NF53_RS27020 NF53_RS27035 SM00357 Cold shock protein domain NF53_RS27035 SM00382 ATPases associated with a variety of cellular activities NF53_RS27035 SM00959 Rho termination factor, N-terminal domain NF53_RS27060 SM00448 cheY-homologous receiver domain NF53_RS27110 SM00155 Phospholipase D. Active site motifs. NF53_RS27120 SM00052 Putative diguanylate phosphodiesterase NF53_RS27120 SM00267 diguanylate cyclase NF53_RS27130 SM00530 Helix-turn-helix XRE-family like proteins NF53_RS27140 SM00421 helix_turn_helix, Lux Regulon NF53_RS27140 SM00448 cheY-homologous receiver domain NF53_RS27155 SM00382 ATPases associated with a variety of cellular activities NF53_RS27200 SM00836 DALR anticodon binding domain NF53_RS27200 SM01016 Arginyl tRNA synthetase N terminal dom NF53_RS27240 SM00422 helix_turn_helix, mercury resistance NF53_RS27270 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NF53_RS27280 SM00382 ATPases associated with a variety of cellular activities NF53_RS27320 SM00936 Penicillin-binding protein 5, C-terminal domain NF53_RS27365 SM00986 Uracil DNA glycosylase superfamily NF53_RS27365 SM00987 UreE urease accessory protein, C-terminal domain NF53_RS27375 SM00382 ATPases associated with a variety of cellular activities NF53_RS27385 SM00354 helix_turn _helix lactose operon repressor NF53_RS27420 SM00100 Cyclic nucleotide-monophosphate binding domain NF53_RS27430 SM00421 helix_turn_helix, Lux Regulon NF53_RS27430 SM00448 cheY-homologous receiver domain NF53_RS27435 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NF53_RS27445 SM00267 diguanylate cyclase NF53_RS27460 SM00448 cheY-homologous receiver domain NF53_RS27460 SM00850 LytTr DNA-binding domain NF53_RS27490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NF53_RS27530 SM00382 ATPases associated with a variety of cellular activities NF53_RS27565 SM00448 cheY-homologous receiver domain NF53_RS27565 SM00850 LytTr DNA-binding domain NF53_RS27570 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NF53_RS27570 SM00387 Histidine kinase-like ATPases NF53_RS27620 SM00487 DEAD-like helicases superfamily NF53_RS27620 SM00490 helicase superfamily c-terminal domain NF53_RS27625 SM01240 NF53_RS27625 NF53_RS27640 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NF53_RS27640 SM00387 Histidine kinase-like ATPases NF53_RS27640 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS27655 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NF53_RS27660 SM00849 Metallo-beta-lactamase superfamily NF53_RS27675 SM00091 PAS domain NF53_RS27675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NF53_RS27675 SM00387 Histidine kinase-like ATPases NF53_RS27675 SM00388 His Kinase A (phosphoacceptor) domain NF53_RS27680 SM00448 cheY-homologous receiver domain NF53_RS27680 SM00862 Transcriptional regulatory protein, C terminal NF53_RS27705 SM00788 Adenylosuccinate synthetase NF53_RS27720 SM00267 diguanylate cyclase NF53_RS27765 SM00470 ParB-like nuclease domain NF53_RS27775 SM00470 ParB-like nuclease domain NF53_RS27785 SM01228 NF53_RS27785 NF53_RS27795 SM00393 Putative single-stranded nucleic acids-binding domain NF53_RS27795 SM01245 NF53_RS27795 NF53_RS27910 SM00433 TopoisomeraseII NF53_RS29240 SM00487 DEAD-like helicases superfamily NF53_RS29240 SM01058 CarD-like/TRCF domain NF53_RS29415 SM00382 ATPases associated with a variety of cellular activities NF53_RS29525 SM00663 RNA polymerase I subunit A N-terminus NF53_RS30910 SM00731 SprT homologues.