locus-tag	class	description
SD98_RS00020	COG0516	GMP reductase activity
SD98_RS00020	COG0517	IMP dehydrogenase activity
SD98_RS00025	COG1686	Belongs to the peptidase S11 family
SD98_RS00055	COG1428	Deoxynucleoside kinase
SD98_RS00060	COG1428	Deoxynucleoside kinase
SD98_RS00065	COG1335	isochorismatase
SD98_RS00075	COG0590	tRNA wobble adenosine to inosine editing
SD98_RS00080	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
SD98_RS00135	COG1982	Orn Lys Arg decarboxylase major
SD98_RS00145	COG0470	DNA polymerase III
SD98_RS00150	COG1774	PSP1 C-terminal conserved region
SD98_RS00160	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
SD98_RS00170	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
SD98_RS00175	COG2002	toxin-antitoxin pair type II binding
SD98_RS00185	COG0084	hydrolase, TatD family'
SD98_RS00205	COG4466	Protein conserved in bacteria
SD98_RS00220	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
SD98_RS00225	COG0251	oxidation-reduction process
SD98_RS00255	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
SD98_RS00260	COG2002	toxin-antitoxin pair type II binding
SD98_RS00265	COG2244	polysaccharide biosynthetic process
SD98_RS00270	COG3956	TIGRFAM MazG family protein
SD98_RS00275	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
SD98_RS00295	COG1098	S1 RNA binding domain
SD98_RS00310	COG2208	phosphoserine phosphatase activity
SD98_RS00320	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
SD98_RS00325	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SD98_RS00340	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
SD98_RS00345	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
SD98_RS00350	COG0512	Glutamine amidotransferase of anthranilate synthase
SD98_RS00355	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
SD98_RS00360	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
SD98_RS00365	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
SD98_RS00370	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
SD98_RS00375	COG1396	sequence-specific DNA binding
SD98_RS00380	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
SD98_RS00410	COG3880	PFAM UvrB UvrC protein
SD98_RS00420	COG0542	response to heat
SD98_RS00425	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
SD98_RS00435	COG4956	integral membrane protein (PIN domain superfamily)
SD98_RS00455	COG1045	serine acetyltransferase
SD98_RS00470	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SD98_RS00475	COG3688	RNA-binding protein containing a PIN domain
SD98_RS00490	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
SD98_RS00495	COG0250	Participates in transcription elongation, termination and antitermination
SD98_RS00500	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
SD98_RS00520	COG2813	Specifically methylates the guanine in position
SD98_RS00530	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
SD98_RS00535	COG1358	cellular component organization or biogenesis
SD98_RS00540	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
SD98_RS00560	COG0051	transcription antitermination factor activity, RNA binding
SD98_RS00565	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
SD98_RS00605	COG0255	Belongs to the universal ribosomal protein uL29 family
SD98_RS00665	COG0201	protein transport
SD98_RS00675	COG0024	Methionine aminopeptidase
SD98_RS00685	COG0257	Belongs to the bacterial ribosomal protein bL36 family
SD98_RS00720	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
SD98_RS00745	COG0860	N-Acetylmuramoyl-L-alanine amidase
SD98_RS00750	COG0489	protein tyrosine kinase activity
SD98_RS00760	COG2194	sulfuric ester hydrolase activity
SD98_RS00765	COG0726	polysaccharide deacetylase
SD98_RS00845	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
SD98_RS00850	COG4856	YbbR-like protein
SD98_RS00885	COG1028	Short-chain dehydrogenase reductase Sdr
SD98_RS00890	COG2011	ABC-type metal ion transport system permease component
SD98_RS00895	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
SD98_RS00900	COG1464	Belongs to the NlpA lipoprotein family
SD98_RS00905	COG0604	alcohol dehydrogenase
SD98_RS00915	COG0277	FAD linked oxidase domain protein
SD98_RS00920	COG2271	Major facilitator Superfamily
SD98_RS00930	COG2814	Major facilitator Superfamily
SD98_RS00950	COG0601	transmembrane transport
SD98_RS00955	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SD98_RS00960	COG0444	Belongs to the ABC transporter superfamily
SD98_RS00965	COG4608	Belongs to the ABC transporter superfamily
SD98_RS00970	COG4166	transmembrane transport
SD98_RS00985	COG4166	transmembrane transport
SD98_RS00990	COG4166	transmembrane transport
SD98_RS00995	COG0656	L-ascorbic acid biosynthetic process
SD98_RS01015	COG4149	molybdate abc transporter
SD98_RS01020	COG0725	ABC transporter, periplasmic molybdate-binding protein
SD98_RS01025	COG1910	domain protein
SD98_RS01035	COG0697	spore germination
SD98_RS01050	COG0204	Acyl-transferase
SD98_RS01060	COG1609	Transcriptional regulator
SD98_RS01070	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SD98_RS01090	COG5298	Protein conserved in bacteria
SD98_RS01125	COG0488	(ABC) transporter
SD98_RS01135	COG0747	negative chemotaxis
SD98_RS01140	COG0601	transmembrane transport
SD98_RS01145	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SD98_RS01150	COG0444	Belongs to the ABC transporter superfamily
SD98_RS01155	COG4608	Belongs to the ABC transporter superfamily
SD98_RS01160	COG0561	phosphatase activity
SD98_RS01185	COG3185	4-Hydroxyphenylpyruvate dioxygenase
SD98_RS01190	COG0179	Fumarylacetoacetate (FAA) hydrolase
SD98_RS01200	COG0531	amino acid
SD98_RS01205	COG2814	Major facilitator Superfamily
SD98_RS01215	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
SD98_RS01225	COG4294	response to UV
SD98_RS01230	COG0705	Rhomboid family
SD98_RS01240	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
SD98_RS01245	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
SD98_RS01250	COG0864	Transcriptional regulator
SD98_RS01255	COG2337	Toxic component of a toxin-antitoxin (TA) module
SD98_RS01260	COG2183	response to ionizing radiation
SD98_RS01360	COG0802	atpase or kinase
SD98_RS01365	COG1214	PFAM Peptidase M22, glycoprotease
SD98_RS01370	COG0456	acetyltransferase
SD98_RS01380	COG0488	(ABC) transporter
SD98_RS01395	COG1266	CAAX protease self-immunity
SD98_RS01415	COG2252	PERMEase
SD98_RS01425	COG5002	protein histidine kinase activity
SD98_RS01450	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
SD98_RS01470	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SD98_RS01515	COG2205	protein histidine kinase activity
SD98_RS01520	COG0745	RESPONSE REGULATOR receiver
SD98_RS01540	COG0697	spore germination
SD98_RS01575	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
SD98_RS01580	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
SD98_RS01585	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
SD98_RS01595	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
SD98_RS01610	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
SD98_RS01620	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
SD98_RS01630	COG0151	Belongs to the GarS family
SD98_RS01655	COG0210	DNA helicase
SD98_RS01665	COG4851	CamS sex pheromone cAM373 precursor
SD98_RS01680	COG1335	isochorismatase
SD98_RS01690	COG2011	ABC-type metal ion transport system permease component
SD98_RS01695	COG1464	Belongs to the NlpA lipoprotein family
SD98_RS01710	COG0003	Pfam Anion-transporting ATPase
SD98_RS01715	COG1846	Transcriptional regulator
SD98_RS01720	COG4682	membrane
SD98_RS01740	COG1597	lipid kinase activity
SD98_RS01745	COG0546	phosphoglycolate phosphatase activity
SD98_RS01750	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
SD98_RS01760	COG1012	belongs to the aldehyde dehydrogenase family
SD98_RS01765	COG2076	Multidrug Resistance protein
SD98_RS01775	COG2309	aminopeptidase activity
SD98_RS01790	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SD98_RS01800	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
SD98_RS01805	COG4807	Protein conserved in bacteria
SD98_RS01835	COG1757	Na H antiporter
SD98_RS01840	COG1473	amidohydrolase
SD98_RS01855	COG0450	alkyl hydroperoxide reductase
SD98_RS01865	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
SD98_RS01875	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SD98_RS01880	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SD98_RS01885	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SD98_RS01905	COG0166	Belongs to the GPI family
SD98_RS01930	COG5002	protein histidine kinase activity
SD98_RS01950	COG3541	Predicted nucleotidyltransferase
SD98_RS01955	COG2814	Major facilitator Superfamily
SD98_RS01960	COG0723	plastoquinol--plastocyanin reductase activity
SD98_RS01960	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
SD98_RS01970	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
SD98_RS01970	COG0723	plastoquinol--plastocyanin reductase activity
SD98_RS01980	COG0765	amino acid transport
SD98_RS01985	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SD98_RS01995	COG0840	transmembrane signaling receptor activity
SD98_RS02020	COG0549	Belongs to the carbamate kinase family
SD98_RS02025	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
SD98_RS02035	COG0277	FAD linked oxidase domain protein
SD98_RS02040	COG0366	Alpha amylase catalytic
SD98_RS02045	COG1263	PTS System
SD98_RS02045	COG2190	(PTS) system
SD98_RS02045	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SD98_RS02075	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
SD98_RS02095	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
SD98_RS02100	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
SD98_RS02105	COG1116	anion transmembrane transporter activity
SD98_RS02150	COG2270	Major facilitator Superfamily
SD98_RS02180	COG2310	stress, protein
SD98_RS02185	COG2310	stress, protein
SD98_RS02190	COG2310	stress, protein
SD98_RS02195	COG0861	Integral membrane protein TerC family
SD98_RS02205	COG3853	Toxic anion resistance protein (TelA)
SD98_RS02220	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
SD98_RS02230	COG1295	ribonuclease BN
SD98_RS02235	COG2217	Heavy metal translocating P-type atpase
SD98_RS02240	COG0697	spore germination
SD98_RS02250	COG0681	Belongs to the peptidase S26 family
SD98_RS02260	COG0586	Pfam SNARE associated Golgi protein
SD98_RS02275	COG3871	stress protein (general stress protein 26)
SD98_RS02280	COG0387	Pfam Sodium calcium exchanger
SD98_RS02290	COG0535	radical SAM domain protein
SD98_RS02310	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
SD98_RS02315	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
SD98_RS02335	COG3829	transcription factor binding
SD98_RS02345	COG0833	amino acid
SD98_RS02350	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SD98_RS02385	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SD98_RS02385	COG1263	PTS System
SD98_RS02390	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
SD98_RS02405	COG1216	Glycosyl transferase, family 2
SD98_RS02415	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
SD98_RS02415	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SD98_RS02420	COG0463	Glycosyl transferase, family 2
SD98_RS02435	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SD98_RS02455	COG1228	amidohydrolase
SD98_RS02460	COG1090	epimerase
SD98_RS02490	COG1988	membrane-bound metal-dependent
SD98_RS02495	COG1194	a g-specific adenine glycosylase
SD98_RS02520	COG1132	(ABC) transporter
SD98_RS02525	COG4129	membrane
SD98_RS02530	COG0069	glutamate synthase activity
SD98_RS02530	COG0067	glutamate synthase
SD98_RS02530	COG0070	glutamate synthase
SD98_RS02540	COG4555	ABC transporter
SD98_RS02560	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
SD98_RS02565	COG0735	belongs to the Fur family
SD98_RS02685	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
SD98_RS02710	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
SD98_RS02725	COG2766	serine protein kinase
SD98_RS02745	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
SD98_RS02755	COG1585	Membrane protein implicated in regulation of membrane protease activity
SD98_RS02760	COG2268	Band 7 protein
SD98_RS02770	COG3290	protein histidine kinase activity
SD98_RS02775	COG4565	transcriptional regulatory protein
SD98_RS02780	COG2851	Citrate transporter
SD98_RS02805	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
SD98_RS02810	COG3842	ATPase activity
SD98_RS02815	COG1175	transmembrane transport
SD98_RS02820	COG0395	ABC-type sugar transport system, permease component
SD98_RS02830	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
SD98_RS02835	COG0745	RESPONSE REGULATOR receiver
SD98_RS02840	COG5002	protein histidine kinase activity
SD98_RS02850	COG4990	cell redox homeostasis
SD98_RS02860	COG3290	protein histidine kinase activity
SD98_RS02865	COG4565	transcriptional regulatory protein
SD98_RS02870	COG3493	citrate carrier protein
SD98_RS02875	COG0281	malic enzyme
SD98_RS02890	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SD98_RS02900	COG5002	protein histidine kinase activity
SD98_RS02925	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
SD98_RS02930	COG3383	formate dehydrogenase (NAD+) activity
SD98_RS02935	COG2427	Protein of unknown function (DUF1641)
SD98_RS02950	COG0531	amino acid
SD98_RS02955	COG0640	Transcriptional regulator
SD98_RS02960	COG2217	Heavy metal translocating P-type atpase
SD98_RS02965	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
SD98_RS02975	COG3227	Zinc metalloprotease (Elastase)
SD98_RS02995	COG2720	vancomycin resistance protein
SD98_RS03000	COG1316	TRANSCRIPTIONal
SD98_RS03005	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SD98_RS03010	COG0346	lactoylglutathione lyase activity
SD98_RS03015	COG1253	flavin adenine dinucleotide binding
SD98_RS03020	COG1027	Aspartate ammonia-lyase
SD98_RS03025	COG1620	l-lactate permease
SD98_RS03040	COG3104	oligopeptide transport
SD98_RS03045	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SD98_RS03050	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SD98_RS03055	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SD98_RS03070	COG0156	8-amino-7-oxononanoate synthase activity
SD98_RS03075	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SD98_RS03085	COG4548	von Willebrand factor, type A
SD98_RS03090	COG0714	Associated with various cellular activities
SD98_RS03110	COG0531	amino acid
SD98_RS03115	COG2188	Transcriptional regulator
SD98_RS03120	COG1263	PTS System
SD98_RS03120	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SD98_RS03125	COG0366	Alpha amylase catalytic
SD98_RS03140	COG0697	spore germination
SD98_RS03145	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
SD98_RS03150	COG1115	amino acid carrier protein
SD98_RS03160	COG1126	abc transporter atp-binding protein
SD98_RS03165	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SD98_RS03170	COG0765	amino acid transport
SD98_RS03175	COG0765	amino acid transport
SD98_RS03180	COG0833	amino acid
SD98_RS03195	COG1595	DNA-templated transcription, initiation
SD98_RS03205	COG2378	regulation of single-species biofilm formation
SD98_RS03210	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
SD98_RS03215	COG5002	protein histidine kinase activity
SD98_RS03230	COG0659	secondary active sulfate transmembrane transporter activity
SD98_RS03245	COG2271	Major facilitator Superfamily
SD98_RS03250	COG1846	Transcriptional regulator
SD98_RS03255	COG0477	Major facilitator Superfamily
SD98_RS03260	COG1609	Transcriptional regulator
SD98_RS03265	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SD98_RS03280	COG4974	Belongs to the 'phage' integrase family
SD98_RS03365	COG3331	DNA recombination
SD98_RS03500	COG5632	N-Acetylmuramoyl-L-alanine amidase
SD98_RS03540	COG1172	Belongs to the binding-protein-dependent transport system permease family
SD98_RS03545	COG1879	ABC-type sugar transport system periplasmic component
SD98_RS03575	COG1063	alcohol dehydrogenase
SD98_RS03625	COG0840	transmembrane signaling receptor activity
SD98_RS03630	COG3584	3D domain protein
SD98_RS03630	COG1388	LysM domain
SD98_RS03635	COG1476	TRANSCRIPTIONal
SD98_RS03655	COG3104	oligopeptide transport
SD98_RS03660	COG1114	Component of the transport system for branched-chain amino acids
SD98_RS03675	COG1113	amino acid transport
SD98_RS03680	COG2252	PERMEase
SD98_RS03695	COG2153	protein acetylation
SD98_RS03705	COG0569	domain protein
SD98_RS03705	COG0475	glutathione-regulated potassium exporter activity
SD98_RS03720	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
SD98_RS03730	COG0833	amino acid
SD98_RS03735	COG4990	cell redox homeostasis
SD98_RS03750	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
SD98_RS03755	COG0697	spore germination
SD98_RS03760	COG0531	amino acid
SD98_RS03775	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
SD98_RS03780	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
SD98_RS03785	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
SD98_RS03785	COG1918	ferrous iron import across plasma membrane
SD98_RS03790	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
SD98_RS03795	COG0573	inorganic phosphate transmembrane transporter activity
SD98_RS03800	COG0581	inorganic phosphate transmembrane transporter activity
SD98_RS03810	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
SD98_RS03930	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
SD98_RS03955	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
SD98_RS03960	COG1116	anion transmembrane transporter activity
SD98_RS03965	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
SD98_RS03970	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
SD98_RS03975	COG0352	thiamine-phosphate diphosphorylase activity
SD98_RS03980	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
SD98_RS03985	COG2104	thiamine diphosphate biosynthetic process
SD98_RS03995	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
SD98_RS04000	COG0351	phosphomethylpyrimidine kinase
SD98_RS04040	COG2205	protein histidine kinase activity
SD98_RS04045	COG2814	Major facilitator Superfamily
SD98_RS04050	COG1846	Transcriptional regulator
SD98_RS04075	COG1136	(ABC) transporter
SD98_RS04085	COG2252	PERMEase
SD98_RS04090	COG1028	Short-chain dehydrogenase reductase Sdr
SD98_RS04105	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SD98_RS04110	COG1621	beta-fructofuranosidase activity
SD98_RS04115	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SD98_RS04115	COG1263	PTS System
SD98_RS04120	COG1609	Transcriptional regulator
SD98_RS04170	COG0778	Nitroreductase
SD98_RS04175	COG2719	SpoVR family
SD98_RS04185	COG3591	Belongs to the peptidase S1B family
SD98_RS04195	COG1937	Protein conserved in bacteria
SD98_RS04200	COG0425	Belongs to the sulfur carrier protein TusA family
SD98_RS04200	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SD98_RS04205	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SD98_RS04205	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SD98_RS04210	COG0425	Belongs to the sulfur carrier protein TusA family
SD98_RS04215	COG0425	Belongs to the sulfur carrier protein TusA family
SD98_RS04215	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SD98_RS04225	COG2210	Belongs to the sulfur carrier protein TusA family
SD98_RS04230	COG0730	response to heat
SD98_RS04240	COG1316	TRANSCRIPTIONal
SD98_RS04245	COG0604	alcohol dehydrogenase
SD98_RS04250	COG1283	sodium-dependent phosphate transmembrane transporter activity
SD98_RS04275	COG3711	transcriptional antiterminator
SD98_RS04275	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SD98_RS04280	COG1447	Phosphotransferase system cellobiose-specific component IIA
SD98_RS04285	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SD98_RS04310	COG3584	3D domain protein
SD98_RS04310	COG1388	LysM domain
SD98_RS04315	COG0577	efflux transmembrane transporter activity
SD98_RS04320	COG1136	(ABC) transporter
SD98_RS04330	COG5522	Integral membrane protein (intg_mem_TP0381)
SD98_RS04345	COG1114	Component of the transport system for branched-chain amino acids
SD98_RS04350	COG3546	catalase activity
SD98_RS04385	COG0586	Pfam SNARE associated Golgi protein
SD98_RS04420	COG0531	amino acid
SD98_RS04425	COG0475	glutathione-regulated potassium exporter activity
SD98_RS04435	COG1737	Transcriptional regulator
SD98_RS04445	COG1263	PTS System
SD98_RS04445	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SD98_RS04455	COG2259	Doxx family
SD98_RS04475	COG1522	sequence-specific DNA binding
SD98_RS04495	COG1309	transcriptional regulator
SD98_RS04500	COG2814	Major facilitator Superfamily
SD98_RS04505	COG2801	Transposase and inactivated derivatives
SD98_RS04525	COG1132	(ABC) transporter
SD98_RS04530	COG1131	(ABC) transporter
SD98_RS04570	COG1136	(ABC) transporter
SD98_RS04575	COG0577	efflux transmembrane transporter activity
SD98_RS04580	COG1136	(ABC) transporter
SD98_RS04585	COG0577	efflux transmembrane transporter activity
SD98_RS04600	COG1733	regulation of RNA biosynthetic process
SD98_RS04620	COG0693	protein deglycase activity
SD98_RS04630	COG0531	amino acid
SD98_RS04635	COG1012	belongs to the aldehyde dehydrogenase family
SD98_RS04645	COG1132	(ABC) transporter
SD98_RS04650	COG1132	(ABC) transporter
SD98_RS04655	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SD98_RS04660	COG0765	amino acid transport
SD98_RS04665	COG1126	abc transporter atp-binding protein
SD98_RS04680	COG0189	ligase activity
SD98_RS04710	COG0028	Belongs to the TPP enzyme family
SD98_RS04715	COG3527	Alpha-acetolactate decarboxylase
SD98_RS04730	COG0561	phosphatase activity
SD98_RS04740	COG3409	Peptidoglycan-binding domain 1 protein
SD98_RS04740	COG5632	N-Acetylmuramoyl-L-alanine amidase
SD98_RS04745	COG0635	Involved in the biosynthesis of porphyrin-containing compound
SD98_RS04750	COG0318	PFAM AMP-dependent synthetase and ligase
SD98_RS04765	COG0659	secondary active sulfate transmembrane transporter activity
SD98_RS04770	COG2244	polysaccharide biosynthetic process
SD98_RS04790	COG1024	Enoyl-CoA hydratase
SD98_RS04810	COG1363	Peptidase, m42
SD98_RS04845	COG0601	transmembrane transport
SD98_RS04850	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SD98_RS04855	COG0444	Belongs to the ABC transporter superfamily
SD98_RS04860	COG4608	Belongs to the ABC transporter superfamily
SD98_RS04885	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SD98_RS04910	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
SD98_RS04925	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
SD98_RS04930	COG2814	Major facilitator Superfamily
SD98_RS04955	COG2801	Transposase and inactivated derivatives
SD98_RS05085	COG0582	viral genome integration into host DNA
SD98_RS05090	COG0477	Major facilitator Superfamily
SD98_RS05095	COG3290	protein histidine kinase activity
SD98_RS05100	COG4565	transcriptional regulatory protein
SD98_RS05105	COG3181	Tripartite tricarboxylate transporter family receptor
SD98_RS05110	COG0494	nUDIX hydrolase
SD98_RS05115	COG0513	Belongs to the DEAD box helicase family
SD98_RS05130	COG0305	Participates in initiation and elongation during chromosome replication
SD98_RS05170	COG0477	Major facilitator Superfamily
SD98_RS05265	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
SD98_RS05265	COG3320	Male sterility
SD98_RS05270	COG1309	transcriptional regulator
SD98_RS05285	COG1183	phosphatidylcholine synthase activity
SD98_RS05300	COG2376	Dihydroxyacetone kinase
SD98_RS05320	COG1959	2 iron, 2 sulfur cluster binding
SD98_RS05350	COG2373	Large extracellular alpha-helical protein
SD98_RS05395	COG3237	CsbD-like
SD98_RS05420	COG1191	sigma factor activity
SD98_RS05430	COG2208	phosphoserine phosphatase activity
SD98_RS05435	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
SD98_RS05440	COG0784	Response regulator, receiver
SD98_RS05440	COG5002	protein histidine kinase activity
SD98_RS05440	COG2205	protein histidine kinase activity
SD98_RS05485	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
SD98_RS05505	COG0420	3'-5' exonuclease activity
SD98_RS05510	COG4717	serine-type aminopeptidase activity
SD98_RS05530	COG1280	lysine exporter protein (LysE YggA)
SD98_RS05535	COG0346	lactoylglutathione lyase activity
SD98_RS05540	COG0346	lactoylglutathione lyase activity
SD98_RS05545	COG0457	Tetratricopeptide repeat
SD98_RS05565	COG2267	carboxylic ester hydrolase activity
SD98_RS05590	COG2140	Oxalate decarboxylase
SD98_RS05595	COG3620	sequence-specific DNA binding
SD98_RS05600	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
SD98_RS05605	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
SD98_RS05615	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
SD98_RS05625	COG3344	reverse transcriptase
SD98_RS05635	COG1404	Belongs to the peptidase S8 family
SD98_RS05670	COG3973	AAA domain
SD98_RS05700	COG4980	gas vesicle protein
SD98_RS05705	COG0537	adenosine 5'-monophosphoramidase activity
SD98_RS05710	COG1131	(ABC) transporter
SD98_RS05715	COG4473	ABC transporter
SD98_RS05725	COG1309	transcriptional regulator
SD98_RS05735	COG3402	PFAM membrane-flanked domain
SD98_RS05740	COG3428	Bacterial PH domain
SD98_RS05775	COG0697	spore germination
SD98_RS05780	COG3402	PFAM membrane-flanked domain
SD98_RS05785	COG3428	Bacterial PH domain
SD98_RS05790	COG2329	Antibiotic biosynthesis monooxygenase
SD98_RS05795	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SD98_RS05810	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
SD98_RS05835	COG1309	transcriptional regulator
SD98_RS05840	COG1511	domain protein
SD98_RS05865	COG1609	Transcriptional regulator
SD98_RS05875	COG1234	tRNA 3'-trailer cleavage
SD98_RS05880	COG0095	Lipoate-protein ligase
SD98_RS05890	COG0318	PFAM AMP-dependent synthetase and ligase
SD98_RS05910	COG1309	transcriptional regulator
SD98_RS05915	COG1073	alpha beta
SD98_RS05920	COG1408	metallophosphoesterase
SD98_RS05925	COG1078	dGTPase activity
SD98_RS05935	COG1595	DNA-templated transcription, initiation
SD98_RS05940	COG3708	Transcriptional regulator
SD98_RS05940	COG2207	Transcriptional regulator
SD98_RS05955	COG2205	protein histidine kinase activity
SD98_RS05960	COG0745	RESPONSE REGULATOR receiver
SD98_RS05985	COG0501	Belongs to the peptidase M48B family
SD98_RS05990	COG0840	transmembrane signaling receptor activity
SD98_RS06000	COG3693	PFAM glycoside hydrolase, family 10
SD98_RS06010	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
SD98_RS06015	COG2224	Isocitrate lyase
SD98_RS06030	COG1278	Cold shock
SD98_RS06045	COG4903	ComK protein
SD98_RS06050	COG0398	Pfam SNARE associated Golgi protein
SD98_RS06110	COG0179	Fumarylacetoacetate (FAA) hydrolase
SD98_RS06135	COG0367	asparagine synthase
SD98_RS06160	COG3646	Phage regulatory protein
SD98_RS06220	COG3331	DNA recombination
SD98_RS06370	COG4824	toxin secretion phage lysis holin
SD98_RS06385	COG3611	Membrane attachment protein
SD98_RS06395	COG0367	asparagine synthase
SD98_RS06405	COG0753	catalase activity
SD98_RS06410	COG0004	ammonium transporteR
SD98_RS06430	COG2996	Protein conserved in bacteria
SD98_RS06445	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SD98_RS06460	COG0561	phosphatase activity
SD98_RS06485	COG2267	carboxylic ester hydrolase activity
SD98_RS06500	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
SD98_RS06505	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
SD98_RS06510	COG5504	Zn-dependent protease
SD98_RS06525	COG0180	Tryptophanyl-tRNA synthetase
SD98_RS06535	COG4166	transmembrane transport
SD98_RS06540	COG0601	transmembrane transport
SD98_RS06545	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SD98_RS06550	COG0444	Belongs to the ABC transporter superfamily
SD98_RS06555	COG4608	Belongs to the ABC transporter superfamily
SD98_RS06560	COG0534	Mate efflux family protein
SD98_RS06565	COG4166	transmembrane transport
SD98_RS06585	COG0861	Integral membrane protein TerC family
SD98_RS06595	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
SD98_RS06615	COG1164	Oligoendopeptidase f
SD98_RS06630	COG2346	COG2346, Truncated hemoglobins
SD98_RS06635	COG4116	CYTH
SD98_RS06645	COG2357	RelA SpoT domain protein
SD98_RS06655	COG0564	pseudouridine synthase activity
SD98_RS06670	COG0772	Belongs to the SEDS family
SD98_RS06675	COG1216	Glycosyl transferase, family 2
SD98_RS06695	COG0457	Tetratricopeptide repeat
SD98_RS06695	COG0463	Glycosyl transferase, family 2
SD98_RS06715	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
SD98_RS06730	COG1091	dTDP-4-dehydrorhamnose reductase activity
SD98_RS06775	COG2153	protein acetylation
SD98_RS06785	COG2382	esterase
SD98_RS06805	COG5492	domain, Protein
SD98_RS06810	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
SD98_RS06825	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
SD98_RS06825	COG0512	Glutamine amidotransferase of anthranilate synthase
SD98_RS06860	COG1620	l-lactate permease
SD98_RS06865	COG5634	Uncharacterized conserved protein (DUF2278)
SD98_RS06920	COG0508	dehydrogenase complex catalyzes the overall conversion of
SD98_RS06930	COG1476	TRANSCRIPTIONal
SD98_RS06960	COG4152	abc transporter atp-binding protein
SD98_RS06965	COG1668	transmembrane transport
SD98_RS06985	COG2226	methyltransferase
SD98_RS06995	COG1686	Belongs to the peptidase S11 family
SD98_RS07000	COG0681	Belongs to the peptidase S26 family
SD98_RS07035	COG1012	belongs to the aldehyde dehydrogenase family
SD98_RS07045	COG1176	ABC-type spermidine putrescine transport system, permease component I
SD98_RS07050	COG1177	transmembrane transport
SD98_RS07060	COG0671	phosphoesterase, PA-phosphatase related
SD98_RS07065	COG2409	Drug exporters of the RND superfamily
SD98_RS07075	COG0564	pseudouridine synthase activity
SD98_RS07085	COG2340	Cysteine-rich secretory protein family
SD98_RS07090	COG0247	lactate metabolic process
SD98_RS07095	COG0277	FAD linked oxidase domain protein
SD98_RS07100	COG3835	regulator
SD98_RS07110	COG0745	RESPONSE REGULATOR receiver
SD98_RS07115	COG5002	protein histidine kinase activity
SD98_RS07120	COG2186	Transcriptional regulator
SD98_RS07140	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
SD98_RS07150	COG2116	formate transmembrane transporter activity
SD98_RS07155	COG0861	Integral membrane protein TerC family
SD98_RS07160	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
SD98_RS07170	COG2030	dehydratase
SD98_RS07190	COG1028	Short-chain dehydrogenase reductase Sdr
SD98_RS07195	COG3243	poly(R)-hydroxyalkanoic acid synthase
SD98_RS07205	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
SD98_RS07220	COG1840	ABC-type Fe3 transport system, periplasmic component
SD98_RS07225	COG3842	ATPase activity
SD98_RS07250	COG1349	DNA-binding transcription factor activity
SD98_RS07265	COG0235	Class ii aldolase
SD98_RS07275	COG2861	carbohydrate metabolic process
SD98_RS07285	COG3852	Histidine kinase
SD98_RS07290	COG1846	Transcriptional regulator
SD98_RS07300	COG2318	DinB family
SD98_RS07310	COG5002	protein histidine kinase activity
SD98_RS07320	COG0720	synthase
SD98_RS07335	COG4873	Protein conserved in bacteria
SD98_RS07375	COG1780	Probably involved in ribonucleotide reductase function
SD98_RS07380	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SD98_RS07385	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SD98_RS07390	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SD98_RS07395	COG1725	Transcriptional regulator
SD98_RS07400	COG1131	(ABC) transporter
SD98_RS07410	COG1131	(ABC) transporter
SD98_RS07430	COG1522	sequence-specific DNA binding
SD98_RS07440	COG1335	isochorismatase
SD98_RS07450	COG1619	proteins homologs of microcin C7 resistance protein MccF
SD98_RS07455	COG2070	2-Nitropropane dioxygenase
SD98_RS07460	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
SD98_RS07470	COG1696	Membrane protein involved in D-alanine export
SD98_RS07495	COG0716	FMN binding
SD98_RS07550	COG1846	Transcriptional regulator
SD98_RS07560	COG1301	dicarboxylic acid transport
SD98_RS07575	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
SD98_RS07580	COG4709	membrane
SD98_RS07585	COG3874	Sporulation protein YtfJ
SD98_RS07615	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
SD98_RS07620	COG0028	Belongs to the TPP enzyme family
SD98_RS07625	COG0440	acetolactate synthase activity
SD98_RS07700	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
SD98_RS07715	COG1183	phosphatidylcholine synthase activity
SD98_RS07720	COG1368	sulfuric ester hydrolase activity
SD98_RS07730	COG0019	diaminopimelate decarboxylase activity
SD98_RS07750	COG0529	Catalyzes the synthesis of activated sulfate
SD98_RS07755	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
SD98_RS07775	COG1648	precorrin-2 dehydrogenase activity
SD98_RS07785	COG0733	neurotransmitter:sodium symporter activity
SD98_RS07805	COG1757	Na H antiporter
SD98_RS07820	COG4758	membrane
SD98_RS07825	COG4585	Histidine kinase
SD98_RS07830	COG2197	response regulator
SD98_RS07840	COG1114	Component of the transport system for branched-chain amino acids
SD98_RS07895	COG0730	response to heat
SD98_RS07900	COG0306	phosphate transporter
SD98_RS07905	COG1392	Phosphate transport regulator
SD98_RS07910	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SD98_RS07925	COG3852	Histidine kinase
SD98_RS07930	COG1801	Protein of unknown function DUF72
SD98_RS07940	COG0582	viral genome integration into host DNA
SD98_RS07945	COG5002	protein histidine kinase activity
SD98_RS07960	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
SD98_RS07960	COG0392	lysyltransferase activity
SD98_RS07975	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
SD98_RS07980	COG1686	Belongs to the peptidase S11 family
SD98_RS07985	COG2715	membrane protein required for spore maturation
SD98_RS07990	COG0700	Nucleoside recognition
SD98_RS07995	COG1187	pseudouridine synthase activity
SD98_RS08005	COG1333	cytochrome c biogenesis protein
SD98_RS08010	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
SD98_RS08015	COG0745	RESPONSE REGULATOR receiver
SD98_RS08020	COG5002	protein histidine kinase activity
SD98_RS08025	COG2096	Adenosyltransferase
SD98_RS08040	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
SD98_RS08045	COG1141	Ferredoxin
SD98_RS08055	COG0514	ATP-dependent DNA helicase (RecQ)
SD98_RS08060	COG1266	CAAX protease self-immunity
SD98_RS08070	COG1408	metallophosphoesterase
SD98_RS08075	COG0789	Transcriptional regulator
SD98_RS08085	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
SD98_RS08105	COG0492	ferredoxin-NADP+ reductase activity
SD98_RS08110	COG0252	asparaginase activity
SD98_RS08180	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
SD98_RS08195	COG0142	geranyltranstransferase activity
SD98_RS08205	COG0142	geranyltranstransferase activity
SD98_RS08250	COG0457	Tetratricopeptide repeat
SD98_RS08270	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
SD98_RS08275	COG2010	Cytochrome c
SD98_RS08275	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
SD98_RS08280	COG4347	Protein of unknown function (DUF1405)
SD98_RS08295	COG2738	Putative neutral zinc metallopeptidase
SD98_RS08305	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SD98_RS08310	COG1694	Mazg nucleotide pyrophosphohydrolase
SD98_RS08330	COG0438	transferase activity, transferring glycosyl groups
SD98_RS08370	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
SD98_RS08370	COG1199	ATP-dependent helicase activity
SD98_RS08390	COG3935	DnaD domain protein
SD98_RS08395	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
SD98_RS08405	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SD98_RS08405	COG4499	WXG100 protein secretion system (Wss), protein YukC
SD98_RS08455	COG0116	Belongs to the methyltransferase superfamily
SD98_RS08465	COG1199	ATP-dependent helicase activity
SD98_RS08470	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
SD98_RS08475	COG2801	Transposase and inactivated derivatives
SD98_RS08490	COG3173	Aminoglycoside phosphotransferase
SD98_RS08500	COG0024	Methionine aminopeptidase
SD98_RS08510	COG2233	PERMEase
SD98_RS08520	COG2311	Membrane
SD98_RS08525	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
SD98_RS08535	COG0456	acetyltransferase
SD98_RS08560	COG0754	glutathionylspermidine amidase activity
SD98_RS08575	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SD98_RS08600	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
SD98_RS08615	COG1215	transferase activity, transferring glycosyl groups
SD98_RS08620	COG0438	transferase activity, transferring glycosyl groups
SD98_RS08635	COG0454	-acetyltransferase
SD98_RS08655	COG0328	RNA-DNA hybrid ribonuclease activity
SD98_RS08690	COG3403	YqcI/YcgG family
SD98_RS08695	COG1280	lysine exporter protein (LysE YggA)
SD98_RS08715	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
SD98_RS08720	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
SD98_RS08730	COG0475	glutathione-regulated potassium exporter activity
SD98_RS08735	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
SD98_RS08740	COG4978	Transcriptional regulator
SD98_RS08740	COG0789	Transcriptional regulator
SD98_RS08750	COG2323	membrane
SD98_RS08755	COG1434	Gram-negative-bacterium-type cell wall biogenesis
SD98_RS08790	COG1923	regulation of RNA biosynthetic process
SD98_RS08800	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
SD98_RS08805	COG1360	Flagellar Motor Protein
SD98_RS08810	COG2201	protein-glutamate methylesterase activity
SD98_RS08815	COG0643	Histidine kinase
SD98_RS08815	COG2198	Histidine kinase
SD98_RS08820	COG1776	CheC inhibitor of MCP methylation
SD98_RS08820	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
SD98_RS08835	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
SD98_RS08855	COG1256	bacterial-type flagellum assembly
SD98_RS08860	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
SD98_RS08865	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
SD98_RS08880	COG1815	bacterial-type flagellum-dependent cell motility
SD98_RS08885	COG1558	bacterial-type flagellum-dependent cell motility
SD98_RS08895	COG1766	The M ring may be actively involved in energy transduction
SD98_RS08900	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
SD98_RS08910	COG1157	protein secretion by the type III secretion system
SD98_RS08930	COG1749	Flagellar hook protein flgE
SD98_RS08945	COG0835	chemotaxis
SD98_RS08945	COG0784	Response regulator, receiver
SD98_RS08955	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
SD98_RS08960	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
SD98_RS08965	COG0741	lytic transglycosylase activity
SD98_RS08975	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
SD98_RS08980	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
SD98_RS08980	COG1776	CheC inhibitor of MCP methylation
SD98_RS08990	COG1338	Plays a role in the flagellum-specific transport system
SD98_RS08995	COG1987	bacterial-type flagellum assembly
SD98_RS09005	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
SD98_RS09010	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
SD98_RS09015	COG1419	protein localization to endoplasmic reticulum
SD98_RS09020	COG4786	Flagellar basal body rod
SD98_RS09025	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
SD98_RS09030	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
SD98_RS09060	COG2329	Antibiotic biosynthesis monooxygenase
SD98_RS09065	COG1215	transferase activity, transferring glycosyl groups
SD98_RS09090	COG0583	DNA-binding transcription factor activity
SD98_RS09095	COG3842	ATPase activity
SD98_RS09145	COG0406	alpha-ribazole phosphatase activity
SD98_RS09165	COG1846	Transcriptional regulator
SD98_RS09175	COG0367	asparagine synthase
SD98_RS09210	COG0523	cobalamin synthesis protein
SD98_RS09215	COG0701	Predicted permease
SD98_RS09225	COG1216	Glycosyl transferase, family 2
SD98_RS09225	COG0438	transferase activity, transferring glycosyl groups
SD98_RS09230	COG1757	Na H antiporter
SD98_RS09235	COG0789	Transcriptional regulator
SD98_RS09270	COG0534	Mate efflux family protein
SD98_RS09275	COG3340	Belongs to the peptidase S51 family
SD98_RS09295	COG0785	Cytochrome C biogenesis protein
SD98_RS09300	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SD98_RS09325	COG2733	membrane
SD98_RS09360	COG1131	(ABC) transporter
SD98_RS09375	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
SD98_RS09380	COG0528	UMP kinase activity
SD98_RS09390	COG1027	Aspartate ammonia-lyase
SD98_RS09395	COG0281	malic enzyme
SD98_RS09400	COG4191	Histidine kinase
SD98_RS09405	COG0784	Response regulator, receiver
SD98_RS09410	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
SD98_RS09465	COG2814	Major facilitator Superfamily
SD98_RS09480	COG1695	Transcriptional regulator
SD98_RS09490	COG0477	Major facilitator Superfamily
SD98_RS09500	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
SD98_RS09505	COG2223	nitrite transmembrane transporter activity
SD98_RS09510	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
SD98_RS09530	COG0733	neurotransmitter:sodium symporter activity
SD98_RS09540	COG5566	PFAM Mor transcription activator
SD98_RS09545	COG2323	membrane
SD98_RS09565	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
SD98_RS09575	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
SD98_RS09580	COG0028	Belongs to the TPP enzyme family
SD98_RS09600	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
SD98_RS09625	COG2814	Major facilitator Superfamily
SD98_RS09630	COG3384	dioxygenase
SD98_RS09645	COG3279	Response regulator of the LytR AlgR family
SD98_RS09650	COG0427	acetyl-CoA hydrolase
SD98_RS09670	COG4166	transmembrane transport
SD98_RS09675	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SD98_RS09680	COG1914	H( )-stimulated, divalent metal cation uptake system
SD98_RS09695	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
SD98_RS09705	COG0531	amino acid
SD98_RS09725	COG2309	aminopeptidase activity
SD98_RS09740	COG0456	acetyltransferase
SD98_RS09755	COG1309	transcriptional regulator
SD98_RS09760	COG2390	Transcriptional regulator
SD98_RS09770	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SD98_RS09775	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
SD98_RS09815	COG4846	Membrane protein involved in cytochrome C biogenesis
SD98_RS09825	COG0006	proline dipeptidase activity
SD98_RS09835	COG2132	Multicopper oxidase
SD98_RS09845	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
SD98_RS09865	COG1114	Component of the transport system for branched-chain amino acids
SD98_RS09875	COG2372	response to copper ion
SD98_RS09875	COG1276	copper resistance
SD98_RS09880	COG4549	nuclear export factor GLE1
SD98_RS09885	COG0697	spore germination
SD98_RS09890	COG0583	DNA-binding transcription factor activity
SD98_RS09895	COG1959	2 iron, 2 sulfur cluster binding
SD98_RS09900	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
SD98_RS09905	COG0778	Nitroreductase
SD98_RS09920	COG0628	permease
SD98_RS09930	COG1231	oxidoreductase activity
SD98_RS09935	COG0523	cobalamin synthesis protein
SD98_RS09945	COG0411	ABC transporter
SD98_RS09965	COG0583	DNA-binding transcription factor activity
SD98_RS09975	COG1942	4-Oxalocrotonate Tautomerase
SD98_RS09995	COG1271	oxidase subunit
SD98_RS10000	COG1294	oxidase, subunit
SD98_RS10005	COG4988	ABC transporter
SD98_RS10010	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
SD98_RS10020	COG1216	Glycosyl transferase, family 2
SD98_RS10060	COG1686	Belongs to the peptidase S11 family
SD98_RS10075	COG0791	NLP P60 protein
SD98_RS10075	COG1388	LysM domain
SD98_RS10085	COG1132	(ABC) transporter
SD98_RS10150	COG3646	Phage regulatory protein
SD98_RS10175	COG0305	Participates in initiation and elongation during chromosome replication
SD98_RS10340	COG1132	(ABC) transporter
SD98_RS10345	COG0745	RESPONSE REGULATOR receiver
SD98_RS10350	COG5002	protein histidine kinase activity
SD98_RS10355	COG0300	oxidoreductase activity
SD98_RS10360	COG4122	O-methyltransferase activity
SD98_RS10395	COG0460	homoserine dehydrogenase
SD98_RS10420	COG1316	TRANSCRIPTIONal
SD98_RS10435	COG1285	pathogenesis
SD98_RS10440	COG1247	-acetyltransferase
SD98_RS10460	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
SD98_RS10470	COG1082	Xylose isomerase domain protein TIM barrel
SD98_RS10480	COG2814	Major facilitator Superfamily
SD98_RS10485	COG1279	arginine transmembrane transporter activity
SD98_RS10490	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SD98_RS10500	COG1752	Esterase of the alpha-beta hydrolase superfamily
SD98_RS10535	COG0577	efflux transmembrane transporter activity
SD98_RS10540	COG2002	toxin-antitoxin pair type II binding
SD98_RS10545	COG1404	Belongs to the peptidase S8 family
SD98_RS10550	COG0640	Transcriptional regulator
SD98_RS10555	COG0667	Aldo Keto reductase
SD98_RS10560	COG2814	Major facilitator Superfamily
SD98_RS10585	COG0840	transmembrane signaling receptor activity
SD98_RS10605	COG3949	Membrane
SD98_RS10610	COG0783	Belongs to the Dps family
SD98_RS10625	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
SD98_RS10635	COG1231	oxidoreductase activity
SD98_RS10640	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SD98_RS10645	COG4989	oxidoreductase activity
SD98_RS10650	COG0523	cobalamin synthesis protein
SD98_RS10655	COG0456	acetyltransferase
SD98_RS10660	COG0803	Belongs to the bacterial solute-binding protein 9 family
SD98_RS10670	COG0702	epimerase
SD98_RS10680	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
SD98_RS10690	COG4166	transmembrane transport
SD98_RS10705	COG0406	alpha-ribazole phosphatase activity
SD98_RS10715	COG5337	Spore coat protein CotH
SD98_RS10720	COG1051	belongs to the nudix hydrolase family
SD98_RS10725	COG0586	Pfam SNARE associated Golgi protein
SD98_RS10730	COG2244	polysaccharide biosynthetic process
SD98_RS10740	COG0701	Predicted permease
SD98_RS10745	COG3689	TIGRFAM TIGR03943 family protein
SD98_RS10750	COG1607	acyl-coa hydrolase
SD98_RS10755	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
SD98_RS10770	COG0702	epimerase
SD98_RS10775	COG2839	Protein conserved in bacteria
SD98_RS10780	COG1253	flavin adenine dinucleotide binding
SD98_RS10805	COG1114	Component of the transport system for branched-chain amino acids
SD98_RS10810	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SD98_RS10830	COG0860	N-Acetylmuramoyl-L-alanine amidase
SD98_RS10840	COG1876	peptidase activity
SD98_RS10855	COG2211	Major facilitator Superfamily
SD98_RS10870	COG0860	N-Acetylmuramoyl-L-alanine amidase
SD98_RS10885	COG1846	Transcriptional regulator
SD98_RS10890	COG2814	Major facilitator Superfamily
SD98_RS10900	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
SD98_RS10905	COG4106	trans-aconitate 2-methyltransferase activity
SD98_RS10920	COG1819	glycosyl
SD98_RS10925	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SD98_RS10930	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SD98_RS10960	COG0456	acetyltransferase
SD98_RS11060	COG3874	Sporulation protein YtfJ
SD98_RS11085	COG2226	methyltransferase
SD98_RS11105	COG1082	Xylose isomerase domain protein TIM barrel
SD98_RS11110	COG0346	lactoylglutathione lyase activity
SD98_RS11120	COG0604	alcohol dehydrogenase
SD98_RS11125	COG1595	DNA-templated transcription, initiation
SD98_RS11135	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
SD98_RS11145	COG0426	domain, Protein
SD98_RS11145	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
SD98_RS11155	COG0386	Belongs to the glutathione peroxidase family
SD98_RS11160	COG1305	Transglutaminase-like
SD98_RS11165	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
SD98_RS11170	COG0714	Associated with various cellular activities
SD98_RS11175	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
SD98_RS11180	COG1140	nitrate reductase beta subunit
SD98_RS11185	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
SD98_RS11190	COG2181	nitrate reductase activity
SD98_RS11195	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
SD98_RS11200	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
SD98_RS11205	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
SD98_RS11210	COG0303	'Molybdopterin
SD98_RS11215	COG0314	molybdopterin synthase activity
SD98_RS11225	COG2223	nitrite transmembrane transporter activity
SD98_RS11245	COG1648	precorrin-2 dehydrogenase activity
SD98_RS11250	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
SD98_RS11255	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
SD98_RS11255	COG1587	Uroporphyrinogen-III synthase
SD98_RS11260	COG2146	nitrite reductase [NAD(P)H] activity
SD98_RS11265	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
SD98_RS11270	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
SD98_RS11305	COG2359	stage V sporulation protein S
SD98_RS11325	COG0457	Tetratricopeptide repeat
SD98_RS11340	COG1418	mRNA catabolic process
SD98_RS11345	COG0488	(ABC) transporter
SD98_RS11360	COG0629	single-stranded DNA binding
SD98_RS11375	COG1413	lyase activity
SD98_RS11390	COG2136	Putative SAM-dependent methyltransferase
SD98_RS11390	COG2521	methyltransferase
SD98_RS11395	COG0018	arginyl-trna synthetase
SD98_RS11425	COG0017	Asparaginyl-tRNA synthetase
SD98_RS11430	COG0733	neurotransmitter:sodium symporter activity
SD98_RS11455	COG2610	gluconate transmembrane transporter activity
SD98_RS11465	COG1794	racemase activity, acting on amino acids and derivatives
SD98_RS11475	COG0456	acetyltransferase
SD98_RS11490	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
SD98_RS11500	COG1131	(ABC) transporter
SD98_RS11515	COG0546	phosphoglycolate phosphatase activity
SD98_RS11530	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
SD98_RS11545	COG0768	penicillin binding
SD98_RS11555	COG0204	Acyl-transferase
SD98_RS11560	COG1272	protein, Hemolysin III
SD98_RS11570	COG0805	protein transport
SD98_RS11580	COG1307	EDD domain protein, DegV family
SD98_RS11590	COG1999	signal sequence binding
SD98_RS11595	COG0071	Belongs to the small heat shock protein (HSP20) family
SD98_RS11600	COG0367	asparagine synthase
SD98_RS11615	COG0860	N-Acetylmuramoyl-L-alanine amidase
SD98_RS11620	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SD98_RS11625	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
SD98_RS11645	COG1335	isochorismatase
SD98_RS11650	COG1051	belongs to the nudix hydrolase family
SD98_RS11655	COG0668	transmembrane transport
SD98_RS11660	COG2203	Gaf domain
SD98_RS11660	COG4585	Histidine kinase
SD98_RS11665	COG2197	response regulator
SD98_RS11670	COG1737	Transcriptional regulator
SD98_RS11675	COG0384	phenazine biosynthesis protein PhzF
SD98_RS11680	COG1064	alcohol dehydrogenase
SD98_RS11695	COG1070	Carbohydrate kinase
SD98_RS11705	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
SD98_RS11740	COG0517	IMP dehydrogenase activity
SD98_RS11740	COG1125	glycine betaine transport
SD98_RS11745	COG1174	glycine betaine transport
SD98_RS11780	COG1253	flavin adenine dinucleotide binding
SD98_RS11785	COG1012	belongs to the aldehyde dehydrogenase family
SD98_RS11790	COG5506	Protein of unknown function (DUF1694)
SD98_RS11805	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
SD98_RS11810	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
SD98_RS11815	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
SD98_RS11820	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SD98_RS11825	COG0456	acetyltransferase
SD98_RS11830	COG3829	transcription factor binding
SD98_RS11835	COG1509	lysine 2,3-aminomutase activity
SD98_RS11870	COG0515	serine threonine protein kinase
SD98_RS11870	COG3064	Membrane
SD98_RS11870	COG4991	sh3 domain protein
SD98_RS11880	COG0671	phosphoesterase, PA-phosphatase related
SD98_RS11885	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
SD98_RS11890	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SD98_RS11990	COG0300	oxidoreductase activity
SD98_RS12010	COG4499	WXG100 protein secretion system (Wss), protein YukC
SD98_RS12010	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SD98_RS12020	COG2814	Major facilitator Superfamily
SD98_RS12025	COG4841	protein insertion into membrane
SD98_RS12030	COG0372	Belongs to the citrate synthase family
SD98_RS12035	COG2079	MmgE PrpD family protein
SD98_RS12040	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
SD98_RS12045	COG1960	acyl-CoA dehydrogenase activity
SD98_RS12050	COG2084	Dehydrogenase
SD98_RS12060	COG1280	lysine exporter protein (LysE YggA)
SD98_RS12065	COG1024	Enoyl-CoA hydratase
SD98_RS12080	COG0420	3'-5' exonuclease activity
SD98_RS12085	COG0419	ATPase involved in DNA repair
SD98_RS12110	COG2223	nitrite transmembrane transporter activity
SD98_RS12115	COG1028	Short-chain dehydrogenase reductase Sdr
SD98_RS12120	COG1169	isochorismate synthase
SD98_RS12125	COG1021	2,3-dihydroxybenzoate-AMP ligase
SD98_RS12130	COG3433	isochorismatase activity
SD98_RS12130	COG1535	isochorismatase
SD98_RS12135	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
SD98_RS12140	COG3251	PFAM MbtH domain protein
SD98_RS12145	COG2814	Major facilitator Superfamily
SD98_RS12160	COG0776	regulation of translation
SD98_RS12170	COG2318	DinB family
SD98_RS12180	COG1115	amino acid carrier protein
SD98_RS12200	COG1187	pseudouridine synthase activity
SD98_RS12205	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
SD98_RS12210	COG1136	(ABC) transporter
SD98_RS12250	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
SD98_RS12265	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SD98_RS12300	COG1247	-acetyltransferase
SD98_RS12325	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
SD98_RS12335	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SD98_RS12365	COG0583	DNA-binding transcription factor activity
SD98_RS12370	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
SD98_RS12380	COG0583	DNA-binding transcription factor activity
SD98_RS12385	COG2258	MOSC domain
SD98_RS12400	COG1132	(ABC) transporter
SD98_RS12405	COG1132	(ABC) transporter
SD98_RS12435	COG1396	sequence-specific DNA binding
SD98_RS12465	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SD98_RS12470	COG1595	DNA-templated transcription, initiation
SD98_RS12500	COG1649	PFAM Uncharacterised BCR, COG1649
SD98_RS12525	COG2971	BadF BadG BcrA BcrD
SD98_RS12535	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
SD98_RS12545	COG1846	Transcriptional regulator
SD98_RS12560	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SD98_RS12585	COG1309	transcriptional regulator
SD98_RS12700	COG0500	methyltransferase
SD98_RS12700	COG3615	Tellurite resistance protein tehB
SD98_RS12710	COG2226	methyltransferase
SD98_RS12715	COG3961	Belongs to the TPP enzyme family
SD98_RS12750	COG2195	Cleaves the N-terminal amino acid of tripeptides
SD98_RS12775	COG2002	toxin-antitoxin pair type II binding
SD98_RS12785	COG0730	response to heat
SD98_RS12795	COG1686	Belongs to the peptidase S11 family
SD98_RS12810	COG2814	Major facilitator Superfamily
SD98_RS12840	COG1028	Short-chain dehydrogenase reductase Sdr
SD98_RS12885	COG0741	lytic transglycosylase activity
SD98_RS12890	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SD98_RS12900	COG0456	acetyltransferase
SD98_RS12910	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
SD98_RS12915	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SD98_RS12920	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
SD98_RS12935	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
SD98_RS12945	COG2234	aminopeptidase activity
SD98_RS12950	COG2814	Major facilitator Superfamily
SD98_RS13000	COG1396	sequence-specific DNA binding
SD98_RS13020	COG1309	transcriptional regulator
SD98_RS13025	COG0367	asparagine synthase
SD98_RS13030	COG4585	Histidine kinase
SD98_RS13040	COG1404	Belongs to the peptidase S8 family
SD98_RS13095	COG0768	penicillin binding
SD98_RS13100	COG1595	DNA-templated transcription, initiation
SD98_RS13110	COG0768	penicillin binding
SD98_RS13115	COG0768	penicillin binding
SD98_RS13125	COG1408	metallophosphoesterase
SD98_RS13135	COG1131	(ABC) transporter
SD98_RS13145	COG1309	transcriptional regulator
SD98_RS13160	COG1960	acyl-CoA dehydrogenase activity
SD98_RS13165	COG0439	Biotin carboxylase
SD98_RS13170	COG0511	ligase activity, forming carbon-carbon bonds
SD98_RS13175	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
SD98_RS13180	COG1024	Enoyl-CoA hydratase
SD98_RS13185	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
SD98_RS13190	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
SD98_RS13210	COG0572	uridine kinase
SD98_RS13215	COG2318	DinB family
SD98_RS13225	COG1686	Belongs to the peptidase S11 family
SD98_RS13255	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
SD98_RS13270	COG3227	Zinc metalloprotease (Elastase)
SD98_RS13275	COG2207	Transcriptional regulator
SD98_RS13305	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
SD98_RS13315	COG1028	Short-chain dehydrogenase reductase Sdr
SD98_RS13320	COG1733	regulation of RNA biosynthetic process
SD98_RS13360	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SD98_RS13380	COG1063	alcohol dehydrogenase
SD98_RS13390	COG2323	membrane
SD98_RS13400	COG0693	protein deglycase activity
SD98_RS13410	COG3386	PFAM SMP-30 Gluconolaconase
SD98_RS13420	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
SD98_RS13425	COG3773	Cell wall hydrolase
SD98_RS13435	COG0745	RESPONSE REGULATOR receiver
SD98_RS13440	COG2205	protein histidine kinase activity
SD98_RS13445	COG0583	DNA-binding transcription factor activity
SD98_RS13450	COG0667	Aldo Keto reductase
SD98_RS13455	COG0488	(ABC) transporter
SD98_RS13470	COG1136	(ABC) transporter
SD98_RS13475	COG0577	efflux transmembrane transporter activity
SD98_RS13500	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SD98_RS13510	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
SD98_RS13535	COG0582	viral genome integration into host DNA
SD98_RS13545	COG1396	sequence-specific DNA binding
SD98_RS13575	COG1484	DNA-dependent DNA replication
SD98_RS13640	COG0582	viral genome integration into host DNA
SD98_RS13680	COG0740	serine-type endopeptidase activity
SD98_RS13755	COG5632	N-Acetylmuramoyl-L-alanine amidase
SD98_RS13760	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
SD98_RS13805	COG2124	cytochrome p450
SD98_RS13840	COG0561	phosphatase activity
SD98_RS13845	COG5002	protein histidine kinase activity
SD98_RS13850	COG0768	penicillin binding
SD98_RS13860	COG1819	glycosyl
SD98_RS13865	COG1794	racemase activity, acting on amino acids and derivatives
SD98_RS13885	COG2205	protein histidine kinase activity
SD98_RS13945	COG2169	Transcriptional regulator
SD98_RS13970	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
SD98_RS13975	COG0604	alcohol dehydrogenase
SD98_RS13980	COG0671	phosphoesterase, PA-phosphatase related
SD98_RS13985	COG0768	penicillin binding
SD98_RS14065	COG0584	glycerophosphoryl diester phosphodiesterase
SD98_RS14085	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SD98_RS14090	COG0697	spore germination
SD98_RS14115	COG0494	nUDIX hydrolase
SD98_RS14125	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
SD98_RS14135	COG2223	nitrite transmembrane transporter activity
SD98_RS14150	COG0592	DNA-directed DNA polymerase activity
SD98_RS14155	COG1051	belongs to the nudix hydrolase family
SD98_RS14180	COG3878	Protein conserved in bacteria
SD98_RS14200	COG4667	esterase of the alpha-beta hydrolase superfamily
SD98_RS14240	COG0322	excinuclease ABC activity
SD98_RS14275	COG1819	glycosyl
SD98_RS14280	COG1819	glycosyl
SD98_RS14300	COG1131	(ABC) transporter
SD98_RS14305	COG1132	(ABC) transporter
SD98_RS14325	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
SD98_RS14350	COG1011	Hydrolase
SD98_RS14355	COG0745	RESPONSE REGULATOR receiver
SD98_RS14360	COG5002	protein histidine kinase activity
SD98_RS14375	COG1136	(ABC) transporter
SD98_RS14380	COG0577	efflux transmembrane transporter activity
SD98_RS14385	COG1073	alpha beta
SD98_RS14390	COG0657	acetylesterase activity
SD98_RS14395	COG0076	glutamate decarboxylase activity
SD98_RS14410	COG1523	belongs to the glycosyl hydrolase 13 family
SD98_RS14415	COG3227	Zinc metalloprotease (Elastase)
SD98_RS14420	COG0737	Belongs to the 5'-nucleotidase family
SD98_RS14440	COG0201	protein transport
SD98_RS14445	COG0697	spore germination
SD98_RS14450	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SD98_RS14490	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SD98_RS14505	COG2959	enzyme of heme biosynthesis
SD98_RS14545	COG1309	transcriptional regulator
SD98_RS14560	COG3284	Transcriptional regulator
SD98_RS14580	COG1349	DNA-binding transcription factor activity
SD98_RS14595	COG1959	2 iron, 2 sulfur cluster binding
SD98_RS14610	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SD98_RS14615	COG0508	dehydrogenase complex catalyzes the overall conversion of
SD98_RS14620	COG0022	dehydrogenase e1 component
SD98_RS14625	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
SD98_RS14635	COG1028	Short-chain dehydrogenase reductase Sdr
SD98_RS14665	COG4176	ABC-type proline glycine betaine transport system permease component
SD98_RS14670	COG0517	IMP dehydrogenase activity
SD98_RS14670	COG4175	Glycine betaine
SD98_RS14700	COG2153	protein acetylation
SD98_RS14720	COG3397	chitin binding
SD98_RS14735	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
SD98_RS14745	COG2205	protein histidine kinase activity
SD98_RS14750	COG2226	methyltransferase
SD98_RS14755	COG2315	Protein conserved in bacteria
SD98_RS14805	COG0456	acetyltransferase
SD98_RS14810	COG3973	AAA domain
SD98_RS14820	COG2105	PFAM AIG2 family protein
SD98_RS14825	COG0514	ATP-dependent DNA helicase (RecQ)
SD98_RS14855	COG2801	Transposase and inactivated derivatives
SD98_RS14880	COG4637	Psort location Cytoplasmic, score
SD98_RS14895	COG3397	chitin binding
SD98_RS14910	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
SD98_RS14915	COG1115	amino acid carrier protein
SD98_RS14920	COG1012	belongs to the aldehyde dehydrogenase family
SD98_RS14925	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
SD98_RS14935	COG3938	Belongs to the proline racemase family
SD98_RS14940	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
SD98_RS14980	COG0586	Pfam SNARE associated Golgi protein
SD98_RS14990	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
SD98_RS14995	COG4166	transmembrane transport
SD98_RS15005	COG4948	Mandelate Racemase Muconate Lactonizing
SD98_RS15020	COG0667	Aldo Keto reductase
SD98_RS15065	COG5002	protein histidine kinase activity
SD98_RS15065	COG3850	Histidine kinase
SD98_RS15070	COG0745	RESPONSE REGULATOR receiver
SD98_RS15095	COG1164	Oligoendopeptidase f
SD98_RS15100	COG1307	EDD domain protein, DegV family
SD98_RS15140	COG2814	Major facilitator Superfamily
SD98_RS15150	COG1664	Polymer-forming cytoskeletal
SD98_RS15155	COG0789	Transcriptional regulator
SD98_RS15160	COG4533	DNA binding
SD98_RS15165	COG2814	Major facilitator Superfamily
SD98_RS15165	COG0477	Major facilitator Superfamily
SD98_RS15185	COG2261	transglycosylase associated protein
SD98_RS15240	COG0436	Aminotransferase
SD98_RS15245	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
SD98_RS15255	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
SD98_RS15270	COG1131	(ABC) transporter
SD98_RS15320	COG0628	permease
SD98_RS15340	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
SD98_RS15345	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
SD98_RS15375	COG2746	aminoglycoside 3-N-acetyltransferase activity
SD98_RS15385	COG0697	spore germination
SD98_RS15390	COG2318	DinB family
SD98_RS15410	COG4912	Dna alkylation repair
SD98_RS15415	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
SD98_RS15420	COG0346	lactoylglutathione lyase activity
SD98_RS15425	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SD98_RS15455	COG0861	Integral membrane protein TerC family
SD98_RS15460	COG1368	sulfuric ester hydrolase activity
SD98_RS15465	COG0488	(ABC) transporter
SD98_RS15470	COG1033	growth of symbiont in host cell
SD98_RS15470	COG2409	Drug exporters of the RND superfamily
SD98_RS15475	COG1309	transcriptional regulator
SD98_RS15490	COG0287	Prephenate dehydrogenase
SD98_RS15505	COG1605	Chorismate mutase
SD98_RS15505	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
SD98_RS15540	COG3584	3D domain protein
SD98_RS15540	COG1388	LysM domain
SD98_RS15570	COG1879	ABC-type sugar transport system periplasmic component
SD98_RS15580	COG1172	Belongs to the binding-protein-dependent transport system permease family
SD98_RS15585	COG1129	ABC transporter
SD98_RS15590	COG2390	Transcriptional regulator
SD98_RS15595	COG1070	Carbohydrate kinase
SD98_RS15625	COG2329	Antibiotic biosynthesis monooxygenase
SD98_RS15640	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SD98_RS15655	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
SD98_RS15660	COG4187	Peptidase family M20/M25/M40
SD98_RS15665	COG1414	Transcriptional regulator
SD98_RS15670	COG0833	amino acid
SD98_RS15685	COG3239	Fatty acid desaturase
SD98_RS15695	COG2720	vancomycin resistance protein
SD98_RS15700	COG1785	Belongs to the alkaline phosphatase family
SD98_RS15710	COG3655	Transcriptional regulator
SD98_RS15735	COG0346	lactoylglutathione lyase activity
SD98_RS15755	COG0714	Associated with various cellular activities
SD98_RS15780	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
SD98_RS15785	COG0753	catalase activity
SD98_RS15815	COG5444	nuclease activity
SD98_RS15855	COG0778	Nitroreductase
SD98_RS15860	COG1846	Transcriptional regulator
SD98_RS15880	COG4884	unkown
SD98_RS15880	COG3831	ATPase activity
SD98_RS15900	COG2207	Transcriptional regulator
SD98_RS15905	COG0456	acetyltransferase
SD98_RS15915	COG2816	NAD+ diphosphatase activity
SD98_RS15920	COG0697	spore germination
SD98_RS15925	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SD98_RS15965	COG0730	response to heat
SD98_RS15975	COG0833	amino acid
SD98_RS16020	COG1329	Transcriptional regulator
SD98_RS16050	COG0768	penicillin binding
SD98_RS16080	COG1984	allophanate hydrolase subunit 2
SD98_RS16085	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
SD98_RS16090	COG1414	Transcriptional regulator
SD98_RS16105	COG0640	Transcriptional regulator
SD98_RS16115	COG1960	acyl-CoA dehydrogenase activity
SD98_RS16130	COG3314	Sporulation integral membrane protein YlbJ
SD98_RS16150	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
SD98_RS16170	COG3848	Pyruvate phosphate dikinase
SD98_RS16170	COG0574	Belongs to the PEP-utilizing enzyme family
SD98_RS16175	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SD98_RS16180	COG2801	Transposase and inactivated derivatives
SD98_RS16200	COG5577	PFAM Coat F domain
SD98_RS16205	COG3403	YqcI/YcgG family
SD98_RS16210	COG1280	lysine exporter protein (LysE YggA)
SD98_RS16215	COG1113	amino acid transport
SD98_RS16245	COG1063	alcohol dehydrogenase
SD98_RS16255	COG1027	Aspartate ammonia-lyase
SD98_RS16260	COG0252	asparaginase activity
SD98_RS16265	COG1396	sequence-specific DNA binding
SD98_RS16285	COG5002	protein histidine kinase activity
SD98_RS16310	COG2207	Transcriptional regulator
SD98_RS16320	COG0322	excinuclease ABC activity
SD98_RS16325	COG0531	amino acid
SD98_RS16330	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
SD98_RS16340	COG0531	amino acid
SD98_RS16345	COG0697	spore germination
SD98_RS16350	COG0784	Response regulator, receiver
SD98_RS16355	COG4191	Histidine kinase
SD98_RS16365	COG1115	amino acid carrier protein
SD98_RS16375	COG2124	cytochrome p450
SD98_RS16390	COG0737	Belongs to the 5'-nucleotidase family
SD98_RS16395	COG2267	carboxylic ester hydrolase activity
SD98_RS16400	COG1335	isochorismatase
SD98_RS16420	COG0583	DNA-binding transcription factor activity
SD98_RS16425	COG1846	Transcriptional regulator
SD98_RS16435	COG1476	TRANSCRIPTIONal
SD98_RS16450	COG0598	Magnesium transport protein CorA
SD98_RS16470	COG1073	alpha beta
SD98_RS16490	COG0415	Belongs to the DNA photolyase family
SD98_RS16495	COG0288	reversible hydration of carbon dioxide
SD98_RS16505	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
SD98_RS16510	COG5609	conserved protein (DUF2294)
SD98_RS16525	COG0697	spore germination
SD98_RS16540	COG1575	Belongs to the MenA family. Type 1 subfamily
SD98_RS16545	COG0803	Belongs to the bacterial solute-binding protein 9 family
SD98_RS16550	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SD98_RS16555	COG1121	(ABC) transporter
SD98_RS16580	COG0798	PFAM Bile acid sodium symporter
SD98_RS16585	COG0640	Transcriptional regulator
SD98_RS16605	COG0346	lactoylglutathione lyase activity
SD98_RS16630	COG0745	RESPONSE REGULATOR receiver
SD98_RS16635	COG3850	Histidine kinase
SD98_RS16635	COG5002	protein histidine kinase activity
SD98_RS16670	COG0277	FAD linked oxidase domain protein
SD98_RS16680	COG1136	(ABC) transporter
SD98_RS16715	COG2814	Major facilitator Superfamily
SD98_RS16725	COG2515	1-aminocyclopropane-1-carboxylate deaminase
SD98_RS16745	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
SD98_RS16770	COG0577	efflux transmembrane transporter activity
SD98_RS16790	COG5002	protein histidine kinase activity
SD98_RS16790	COG3850	Histidine kinase
SD98_RS16800	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SD98_RS16815	COG1619	proteins homologs of microcin C7 resistance protein MccF
SD98_RS16835	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
SD98_RS16855	COG0662	Cupin 2, conserved barrel domain protein
SD98_RS16860	COG2207	Transcriptional regulator
SD98_RS16860	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SD98_RS16880	COG5632	N-Acetylmuramoyl-L-alanine amidase
SD98_RS16880	COG3409	Peptidoglycan-binding domain 1 protein
SD98_RS16890	COG2814	Major facilitator Superfamily
SD98_RS16930	COG5444	nuclease activity
SD98_RS16955	COG5444	nuclease activity
SD98_RS16975	COG5444	nuclease activity
SD98_RS17020	COG1876	peptidase activity
SD98_RS17025	COG2843	Capsule synthesis protein
SD98_RS17035	COG0477	Major facilitator Superfamily
SD98_RS17050	COG1846	Transcriptional regulator
SD98_RS17055	COG2814	Major facilitator Superfamily
SD98_RS17065	COG2031	fatty acid transporter
SD98_RS17075	COG2249	NAD(P)H dehydrogenase (quinone) activity
SD98_RS17130	COG1288	antiporter activity
SD98_RS17135	COG2356	endonuclease I
SD98_RS17145	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
SD98_RS17150	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
SD98_RS17170	COG1733	regulation of RNA biosynthetic process
SD98_RS17175	COG0778	Nitroreductase
SD98_RS17205	COG1028	Short-chain dehydrogenase reductase Sdr
SD98_RS17215	COG1131	(ABC) transporter
SD98_RS17240	COG1011	Hydrolase
SD98_RS17250	COG2365	Tyrosine phosphatase family
SD98_RS17265	COG1051	belongs to the nudix hydrolase family
SD98_RS17275	COG0346	lactoylglutathione lyase activity
SD98_RS17280	COG1940	carbohydrate kinase activity
SD98_RS17285	COG0738	Major facilitator superfamily
SD98_RS17290	COG0110	maltose O-acetyltransferase activity
SD98_RS17305	COG0628	permease
SD98_RS17340	COG0500	methyltransferase
SD98_RS17350	COG0477	Major facilitator Superfamily
SD98_RS17380	COG1253	flavin adenine dinucleotide binding
SD98_RS17385	COG0789	Transcriptional regulator
SD98_RS17395	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
SD98_RS17420	COG0697	spore germination
SD98_RS17435	COG1357	PFAM Pentapeptide repeats (8 copies)
SD98_RS17440	COG3813	Protein conserved in bacteria
SD98_RS17445	COG2706	6-phosphogluconolactonase activity
SD98_RS17450	COG1070	Carbohydrate kinase
SD98_RS17455	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
SD98_RS17460	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
SD98_RS17465	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
SD98_RS17470	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
SD98_RS17485	COG0814	amino acid
SD98_RS17515	COG1733	regulation of RNA biosynthetic process
SD98_RS17520	COG2188	Transcriptional regulator
SD98_RS17525	COG0673	inositol 2-dehydrogenase activity
SD98_RS17555	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SD98_RS17580	COG0384	phenazine biosynthesis protein PhzF
SD98_RS17590	COG0318	PFAM AMP-dependent synthetase and ligase
SD98_RS17595	COG2249	NAD(P)H dehydrogenase (quinone) activity
SD98_RS17600	COG1733	regulation of RNA biosynthetic process
SD98_RS17605	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
SD98_RS17635	COG1191	sigma factor activity
SD98_RS17685	COG1151	hydroxylamine reductase activity
SD98_RS17690	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SD98_RS17720	COG2072	flavoprotein involved in K transport
SD98_RS17750	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SD98_RS17755	COG0604	alcohol dehydrogenase
SD98_RS17760	COG1113	amino acid transport
SD98_RS17765	COG2814	Major facilitator Superfamily
SD98_RS17795	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
SD98_RS17800	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
SD98_RS17810	COG1247	-acetyltransferase
SD98_RS17815	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SD98_RS17820	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SD98_RS17825	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SD98_RS17830	COG3739	integral membrane protein
SD98_RS17865	COG0583	DNA-binding transcription factor activity
SD98_RS17885	COG1193	negative regulation of DNA recombination
SD98_RS17900	COG2162	N-hydroxyarylamine O-acetyltransferase activity
SD98_RS17910	COG2162	N-hydroxyarylamine O-acetyltransferase activity
SD98_RS17915	COG1164	Oligoendopeptidase f
SD98_RS17920	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
SD98_RS17930	COG2271	Major facilitator Superfamily
SD98_RS17945	COG0584	glycerophosphoryl diester phosphodiesterase
SD98_RS17960	COG0640	Transcriptional regulator
SD98_RS17965	COG0604	alcohol dehydrogenase
SD98_RS17980	COG0457	Tetratricopeptide repeat
SD98_RS17990	COG0385	Bile acid
SD98_RS17995	COG0277	FAD linked oxidase domain protein
SD98_RS18015	COG1252	NADH dehydrogenase
SD98_RS18030	COG4641	Protein conserved in bacteria
SD98_RS18040	COG2089	acid synthase
SD98_RS18055	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
SD98_RS18060	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
SD98_RS18065	COG1088	dTDP-glucose 4,6-dehydratase activity
SD98_RS18075	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
SD98_RS18080	COG0463	Glycosyl transferase, family 2
SD98_RS18085	COG0463	Glycosyl transferase, family 2
SD98_RS18095	COG0823	Involved in the tonB-independent uptake of proteins
SD98_RS18100	COG3397	chitin binding
SD98_RS18110	COG0697	spore germination
SD98_RS18130	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
SD98_RS18150	COG0457	Tetratricopeptide repeat
SD98_RS18205	COG0488	(ABC) transporter
SD98_RS18210	COG1309	transcriptional regulator
SD98_RS18225	COG1876	peptidase activity
SD98_RS18250	COG3852	Histidine kinase
SD98_RS18260	COG1285	pathogenesis
SD98_RS18270	COG2514	catechol 2,3-dioxygenase activity
SD98_RS18275	COG2720	vancomycin resistance protein
SD98_RS18315	COG0716	FMN binding
SD98_RS18325	COG0494	nUDIX hydrolase
SD98_RS18345	COG1028	Short-chain dehydrogenase reductase Sdr
SD98_RS18355	COG0165	Argininosuccinate lyase
SD98_RS18370	COG4145	pantothenate transmembrane transporter activity
SD98_RS18380	COG1012	belongs to the aldehyde dehydrogenase family
SD98_RS18385	COG1028	Short-chain dehydrogenase reductase Sdr
SD98_RS18395	COG1657	PFAM Prenyltransferase squalene oxidase
SD98_RS18400	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
SD98_RS18405	COG2962	Rard protein
SD98_RS18410	COG3326	Membrane
SD98_RS18425	COG0489	protein tyrosine kinase activity
SD98_RS18435	COG0314	molybdopterin synthase activity
SD98_RS18440	COG0303	'Molybdopterin
SD98_RS18445	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
SD98_RS18450	COG2116	formate transmembrane transporter activity
SD98_RS18460	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
SD98_RS18465	COG5609	conserved protein (DUF2294)
SD98_RS18470	COG2427	Protein of unknown function (DUF1641)
SD98_RS18475	COG3383	formate dehydrogenase (NAD+) activity
SD98_RS18485	COG0697	spore germination
SD98_RS18500	COG0531	amino acid
SD98_RS18535	COG2226	methyltransferase
SD98_RS18540	COG4166	transmembrane transport
SD98_RS18555	COG4166	transmembrane transport
SD98_RS18560	COG1301	dicarboxylic acid transport
SD98_RS18565	COG1316	TRANSCRIPTIONal
SD98_RS18575	COG1595	DNA-templated transcription, initiation
SD98_RS18585	COG1131	(ABC) transporter
SD98_RS18605	COG0673	inositol 2-dehydrogenase activity
SD98_RS18610	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
SD98_RS18615	COG0187	DNA topoisomerase II activity
SD98_RS18625	COG1832	CoA-binding protein
SD98_RS18630	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SD98_RS18635	COG0745	RESPONSE REGULATOR receiver
SD98_RS18655	COG4841	protein insertion into membrane
SD98_RS18660	COG0824	Thioesterase
SD98_RS18685	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SD98_RS18695	COG1132	(ABC) transporter
SD98_RS18700	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
SD98_RS18730	COG2211	Major facilitator Superfamily
SD98_RS18740	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
SD98_RS18755	COG0183	Belongs to the thiolase family
SD98_RS18760	COG0318	PFAM AMP-dependent synthetase and ligase
SD98_RS18765	COG1268	BioY protein
SD98_RS18770	COG0318	PFAM AMP-dependent synthetase and ligase
SD98_RS18775	COG1396	sequence-specific DNA binding
SD98_RS18810	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SD98_RS18820	COG5002	protein histidine kinase activity
SD98_RS18825	COG0400	carboxylic ester hydrolase activity
SD98_RS18830	COG0346	lactoylglutathione lyase activity
SD98_RS18835	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
SD98_RS18845	COG0069	glutamate synthase activity
SD98_RS18850	COG1902	pentaerythritol trinitrate reductase activity
SD98_RS18855	COG1329	Transcriptional regulator
SD98_RS18860	COG0010	Belongs to the arginase family
SD98_RS18915	COG4846	Membrane protein involved in cytochrome C biogenesis
SD98_RS18920	COG0785	Cytochrome C biogenesis protein
SD98_RS18930	COG1473	amidohydrolase
SD98_RS18940	COG1131	(ABC) transporter
SD98_RS18960	COG0583	DNA-binding transcription factor activity
SD98_RS18970	COG1346	cytolysis
SD98_RS18985	COG0730	response to heat
SD98_RS19010	COG1132	(ABC) transporter
SD98_RS19015	COG1132	(ABC) transporter
SD98_RS19050	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SD98_RS19055	COG0737	Belongs to the 5'-nucleotidase family
SD98_RS19080	COG0142	geranyltranstransferase activity
SD98_RS19090	COG0142	geranyltranstransferase activity
SD98_RS19105	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
SD98_RS19175	COG0252	asparaginase activity
SD98_RS19180	COG0492	ferredoxin-NADP+ reductase activity
SD98_RS19200	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
SD98_RS19210	COG0789	Transcriptional regulator
SD98_RS19215	COG1408	metallophosphoesterase
SD98_RS19225	COG1266	CAAX protease self-immunity
SD98_RS19230	COG0514	ATP-dependent DNA helicase (RecQ)
SD98_RS19240	COG1141	Ferredoxin
SD98_RS19245	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
SD98_RS19260	COG2096	Adenosyltransferase
SD98_RS19265	COG5002	protein histidine kinase activity
SD98_RS19270	COG0745	RESPONSE REGULATOR receiver
SD98_RS19275	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
SD98_RS19280	COG1333	cytochrome c biogenesis protein
SD98_RS19290	COG1187	pseudouridine synthase activity
SD98_RS19295	COG0700	Nucleoside recognition
SD98_RS19300	COG2715	membrane protein required for spore maturation
SD98_RS19305	COG1686	Belongs to the peptidase S11 family
SD98_RS19310	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
SD98_RS19325	COG0392	lysyltransferase activity
SD98_RS19325	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
SD98_RS19340	COG5002	protein histidine kinase activity
SD98_RS19345	COG0582	viral genome integration into host DNA
SD98_RS19355	COG1801	Protein of unknown function DUF72
SD98_RS19360	COG3852	Histidine kinase
SD98_RS19375	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SD98_RS19380	COG1392	Phosphate transport regulator
SD98_RS19385	COG0306	phosphate transporter
SD98_RS19390	COG0730	response to heat
SD98_RS19440	COG1114	Component of the transport system for branched-chain amino acids
SD98_RS19450	COG2197	response regulator
SD98_RS19455	COG4585	Histidine kinase
SD98_RS19460	COG4758	membrane
SD98_RS19475	COG1757	Na H antiporter
SD98_RS19495	COG0733	neurotransmitter:sodium symporter activity
SD98_RS19500	COG1648	precorrin-2 dehydrogenase activity
SD98_RS19520	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
SD98_RS19525	COG0529	Catalyzes the synthesis of activated sulfate
SD98_RS19545	COG0019	diaminopimelate decarboxylase activity
SD98_RS19555	COG1368	sulfuric ester hydrolase activity
SD98_RS19560	COG1183	phosphatidylcholine synthase activity
SD98_RS19575	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
SD98_RS19650	COG0440	acetolactate synthase activity
SD98_RS19655	COG0028	Belongs to the TPP enzyme family
SD98_RS19660	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
SD98_RS19680	COG3874	Sporulation protein YtfJ
SD98_RS19685	COG4709	membrane
SD98_RS19690	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
SD98_RS19740	COG1404	Belongs to the peptidase S8 family
SD98_RS19750	COG4585	Histidine kinase
SD98_RS19755	COG0367	asparagine synthase
SD98_RS19760	COG1309	transcriptional regulator
SD98_RS19775	COG1396	sequence-specific DNA binding
SD98_RS19810	COG4550	Control of competence regulator ComK, YlbF/YmcA
SD98_RS19820	COG1013	pyruvate-flavodoxin oxidoreductase activity
SD98_RS19825	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
SD98_RS19825	COG0674	pyruvate-flavodoxin oxidoreductase activity
SD98_RS19835	COG2359	stage V sporulation protein S
SD98_RS19840	COG1692	metallophosphoesterase
SD98_RS19865	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
SD98_RS19870	COG1426	Protein conserved in bacteria
SD98_RS19885	COG0300	oxidoreductase activity
SD98_RS19890	COG0612	Peptidase, M16
SD98_RS19895	COG0612	Peptidase, M16
SD98_RS19900	COG1079	Belongs to the binding-protein-dependent transport system permease family
SD98_RS19905	COG4603	Belongs to the binding-protein-dependent transport system permease family
SD98_RS19910	COG3845	ABC transporter
SD98_RS19915	COG1744	ABC transporter substrate-binding protein PnrA-like
SD98_RS19920	COG2188	Transcriptional regulator
SD98_RS19935	COG0740	serine-type endopeptidase activity
SD98_RS19940	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
SD98_RS19950	COG0527	aspartate kinase activity
SD98_RS19955	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
SD98_RS19960	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
SD98_RS20110	COG1278	Cold shock
SD98_RS20120	COG0582	viral genome integration into host DNA
SD98_RS20165	COG0305	Participates in initiation and elongation during chromosome replication
SD98_RS20200	COG1396	sequence-specific DNA binding
SD98_RS20220	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
SD98_RS20225	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
SD98_RS20230	COG1873	PFAM PRC-barrel domain
SD98_RS20235	COG0612	Peptidase, M16
SD98_RS20240	COG0726	polysaccharide deacetylase
SD98_RS20255	COG0196	riboflavin kinase activity
SD98_RS20265	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
SD98_RS20270	COG1550	Protein conserved in bacteria
SD98_RS20280	COG1358	cellular component organization or biogenesis
SD98_RS20285	COG2740	Nucleic-acid-binding protein implicated in transcription termination
SD98_RS20290	COG0195	Participates in both transcription termination and antitermination
SD98_RS20310	COG0750	zinc metalloprotease
SD98_RS20320	COG4589	Belongs to the CDS family
SD98_RS20365	COG4974	Belongs to the 'phage' integrase family
SD98_RS20375	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
SD98_RS20380	COG0758	DNA mediated transformation
SD98_RS20385	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
SD98_RS20425	COG1837	Belongs to the UPF0109 family
SD98_RS20435	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
SD98_RS20445	COG0552	protein localization to endoplasmic reticulum
SD98_RS20450	COG1196	nuclear chromosome segregation
SD98_RS20460	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
SD98_RS20465	COG1028	Short-chain dehydrogenase reductase Sdr
SD98_RS20470	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
SD98_RS20485	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
SD98_RS20490	COG1461	Dihydroxyacetone kinase
SD98_RS20495	COG1302	Protein conserved in bacteria
SD98_RS20510	COG1564	THIamine pyrophosphokinase
SD98_RS20515	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
SD98_RS20525	COG0515	serine threonine protein kinase
SD98_RS20525	COG2815	serine threonine protein kinase
SD98_RS20530	COG0631	protein serine/threonine phosphatase activity
SD98_RS20540	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
SD98_RS20540	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
SD98_RS20555	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
SD98_RS20560	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
SD98_RS20580	COG1561	YicC-like family, N-terminal region
SD98_RS20585	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
SD98_RS20620	COG3069	C4-dicarboxylate transmembrane transporter activity
SD98_RS20680	COG0564	pseudouridine synthase activity
SD98_RS20700	COG3599	regulation of cell shape
SD98_RS20705	COG2302	S4 RNA-binding domain
SD98_RS20710	COG0762	integral membrane protein
SD98_RS20720	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
SD98_RS20730	COG1873	PFAM PRC-barrel domain
SD98_RS20735	COG1191	sigma factor activity
SD98_RS20740	COG1191	sigma factor activity
SD98_RS20750	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
SD98_RS20755	COG0849	cell division
SD98_RS20775	COG0772	Belongs to the SEDS family
SD98_RS20795	COG0768	penicillin binding
SD98_RS20800	COG0768	penicillin binding
SD98_RS20820	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
SD98_RS20835	COG0333	Belongs to the bacterial ribosomal protein bL32 family
SD98_RS20840	COG1399	metal-binding, possibly nucleic acid-binding protein
SD98_RS20850	COG3480	Lon protease (S16) C-terminal proteolytic domain
SD98_RS20855	COG1752	Esterase of the alpha-beta hydrolase superfamily
SD98_RS20860	COG3314	Sporulation integral membrane protein YlbJ
SD98_RS20870	COG0742	ribosomal rna small subunit methyltransferase
SD98_RS20885	COG3679	Belongs to the UPF0342 family
SD98_RS20890	COG0406	alpha-ribazole phosphatase activity
SD98_RS20905	COG2340	Cysteine-rich secretory protein family
SD98_RS20920	COG3336	cytochrome c oxidase
SD98_RS20955	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
SD98_RS20960	COG0772	Belongs to the SEDS family
SD98_RS20970	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
SD98_RS20975	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
SD98_RS20985	COG4896	Protein conserved in bacteria
SD98_RS21000	COG1217	gtp-binding protein TYPA
SD98_RS21010	COG0483	inositol monophosphate 1-phosphatase activity
SD98_RS21030	COG1982	Orn Lys Arg decarboxylase major
SD98_RS21080	COG0022	dehydrogenase e1 component
SD98_RS21085	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
SD98_RS21100	COG0561	phosphatase activity
SD98_RS21110	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
SD98_RS21115	COG0569	domain protein
SD98_RS21135	COG0583	DNA-binding transcription factor activity
SD98_RS21140	COG0517	IMP dehydrogenase activity
SD98_RS21150	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
SD98_RS21160	COG4703	Protein of unknown function (DUF1797)
SD98_RS21175	COG2200	EAL domain
SD98_RS21180	COG1028	Short-chain dehydrogenase reductase Sdr
SD98_RS21185	COG1408	metallophosphoesterase
SD98_RS21230	COG2814	Major facilitator Superfamily
SD98_RS21265	COG3209	COG3209 Rhs family protein
SD98_RS21275	COG2205	protein histidine kinase activity
SD98_RS21285	COG0436	Aminotransferase
SD98_RS21290	COG1609	Transcriptional regulator
SD98_RS21295	COG3833	ABC-type maltose transport systems, permease component
SD98_RS21300	COG1175	transmembrane transport
SD98_RS21305	COG2182	Extracellular solute-binding protein
SD98_RS21315	COG0366	Alpha amylase catalytic
SD98_RS21320	COG3842	ATPase activity
SD98_RS21360	COG0183	Belongs to the thiolase family
SD98_RS21395	COG1695	Transcriptional regulator
SD98_RS21400	COG1028	Short-chain dehydrogenase reductase Sdr
SD98_RS21420	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
SD98_RS21425	COG0436	Aminotransferase
SD98_RS21460	COG2084	Dehydrogenase
SD98_RS21470	COG2199	diguanylate cyclase activity
SD98_RS21475	COG0778	Nitroreductase
SD98_RS21500	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SD98_RS21500	COG2190	(PTS) system
SD98_RS21500	COG1263	PTS System
SD98_RS21505	COG3711	transcriptional antiterminator
SD98_RS21515	COG2188	Transcriptional regulator
SD98_RS21525	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
SD98_RS21555	COG1547	Domain of unknown function (DUF309)
SD98_RS21560	COG0456	acetyltransferase
SD98_RS21565	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
SD98_RS21570	COG4086	secreted protein
SD98_RS21575	COG0561	phosphatase activity
SD98_RS21580	COG0697	spore germination
SD98_RS21595	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
SD98_RS21620	COG0733	neurotransmitter:sodium symporter activity
SD98_RS21640	COG1686	Belongs to the peptidase S11 family
SD98_RS21645	COG1725	Transcriptional regulator
SD98_RS21650	COG1131	(ABC) transporter
SD98_RS21675	COG1846	Transcriptional regulator
SD98_RS21690	COG0598	Magnesium transport protein CorA
SD98_RS21715	COG4974	Belongs to the 'phage' integrase family
SD98_RS21725	COG0735	belongs to the Fur family
SD98_RS21730	COG1300	Membrane
SD98_RS21750	COG0667	Aldo Keto reductase
SD98_RS21755	COG0656	L-ascorbic acid biosynthetic process
SD98_RS21760	COG0456	acetyltransferase
SD98_RS21760	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
SD98_RS21770	COG1525	nuclease
SD98_RS21770	COG4085	toxin activity
SD98_RS21770	COG0737	Belongs to the 5'-nucleotidase family
SD98_RS21780	COG0596	Alpha beta hydrolase
SD98_RS21785	COG2056	Na+-H+ antiporter family
SD98_RS21790	COG1609	Transcriptional regulator
SD98_RS21795	COG0456	acetyltransferase
SD98_RS21800	COG1073	alpha beta
SD98_RS21815	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
SD98_RS21815	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
SD98_RS21820	COG0307	riboflavin synthase, alpha
SD98_RS21850	COG1073	alpha beta
SD98_RS21850	COG2226	methyltransferase
SD98_RS21865	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
SD98_RS21875	COG1757	Na H antiporter
SD98_RS21880	COG0737	Belongs to the 5'-nucleotidase family
SD98_RS21890	COG1522	sequence-specific DNA binding
SD98_RS21935	COG0300	oxidoreductase activity
SD98_RS21940	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SD98_RS21945	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
SD98_RS21950	COG1760	l-serine dehydratase
SD98_RS21955	COG1760	l-serine dehydratase
SD98_RS21985	COG1285	pathogenesis
SD98_RS21995	COG2195	Cleaves the N-terminal amino acid of tripeptides
SD98_RS22000	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SD98_RS22015	COG1376	ErfK ybiS ycfS ynhG family protein
SD98_RS22020	COG4129	membrane
SD98_RS22025	COG1126	abc transporter atp-binding protein
SD98_RS22030	COG0765	amino acid transport
SD98_RS22035	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SD98_RS22060	COG2323	membrane
SD98_RS22065	COG0772	Belongs to the SEDS family
SD98_RS22075	COG0508	dehydrogenase complex catalyzes the overall conversion of
SD98_RS22080	COG0022	dehydrogenase e1 component
SD98_RS22085	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
SD98_RS22090	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SD98_RS22105	COG0280	phosphate acetyltransferase
SD98_RS22115	COG3290	protein histidine kinase activity
SD98_RS22115	COG3829	transcription factor binding
SD98_RS22125	COG0584	glycerophosphoryl diester phosphodiesterase
SD98_RS22130	COG3093	addiction module antidote protein HigA
SD98_RS22145	COG0750	zinc metalloprotease
SD98_RS22150	COG0497	DNA recombination
SD98_RS22160	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
SD98_RS22170	COG0142	geranyltranstransferase activity
SD98_RS22195	COG1302	Protein conserved in bacteria
SD98_RS22200	COG0439	Biotin carboxylase
SD98_RS22205	COG0511	ligase activity, forming carbon-carbon bonds
SD98_RS22250	COG3854	ATPases associated with a variety of cellular activities
SD98_RS22275	COG0006	proline dipeptidase activity
SD98_RS22290	COG3872	metal-dependent enzyme
SD98_RS22300	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SD98_RS22335	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SD98_RS22345	COG1609	Transcriptional regulator
SD98_RS22355	COG2076	Multidrug Resistance protein
SD98_RS22360	COG2076	Multidrug Resistance protein
SD98_RS22405	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
SD98_RS22470	COG1459	type II secretion system
SD98_RS22475	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
SD98_RS22530	COG1410	methionine synthase
SD98_RS22530	COG0646	methionine synthase
SD98_RS22535	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
SD98_RS22535	COG0646	methionine synthase
SD98_RS22540	COG0626	cystathionine gamma-synthase activity
SD98_RS22545	COG0626	cystathionine gamma-synthase activity
SD98_RS22565	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SD98_RS22575	COG1940	carbohydrate kinase activity
SD98_RS22580	COG4483	Protein conserved in bacteria
SD98_RS22585	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
SD98_RS22590	COG0267	Belongs to the bacterial ribosomal protein bL33 family
SD98_RS22595	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
SD98_RS22600	COG0704	Plays a role in the regulation of phosphate uptake
SD98_RS22610	COG0573	inorganic phosphate transmembrane transporter activity
SD98_RS22615	COG0573	inorganic phosphate transmembrane transporter activity
SD98_RS22625	COG0768	penicillin binding
SD98_RS22630	COG0477	Major facilitator Superfamily
SD98_RS22635	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
SD98_RS22645	COG5521	maltodextrose utilization protein MalA
SD98_RS22660	COG0735	belongs to the Fur family
SD98_RS22665	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SD98_RS22670	COG1121	(ABC) transporter
SD98_RS22675	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SD98_RS22705	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
SD98_RS22710	COG2384	SAM-dependent methyltransferase
SD98_RS22720	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SD98_RS22725	COG0358	DNA primase activity
SD98_RS22740	COG0517	IMP dehydrogenase activity
SD98_RS22755	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
SD98_RS22760	COG0295	cytidine deaminase activity
SD98_RS22765	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
SD98_RS22775	COG1480	7TM receptor with intracellular HD hydrolase
SD98_RS22780	COG1702	phosphate starvation-inducible protein PhoH
SD98_RS22795	COG1610	YqeY-like protein
SD98_RS22800	COG0828	Belongs to the bacterial ribosomal protein bS21 family
SD98_RS22805	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
SD98_RS22810	COG1385	rRNA (uridine-N3-)-methyltransferase activity
SD98_RS22840	COG0635	Involved in the biosynthesis of porphyrin-containing compound
SD98_RS22845	COG1733	regulation of RNA biosynthetic process
SD98_RS22870	COG1466	dna polymerase III delta subunit
SD98_RS22880	COG2333	competence protein COMEC
SD98_RS22880	COG0658	competence protein
SD98_RS22885	COG2131	deaminase
SD98_RS22890	COG1555	photosystem II stabilization
SD98_RS22890	COG1596	polysaccharide export
SD98_RS22895	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
SD98_RS22900	COG2226	methyltransferase
SD98_RS22905	COG0799	negative regulation of ribosome biogenesis
SD98_RS22910	COG1713	HD superfamily hydrolase involved in NAD metabolism
SD98_RS22920	COG1534	Rna-binding protein
SD98_RS22930	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
SD98_RS22935	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
SD98_RS22960	COG1595	DNA-templated transcription, initiation
SD98_RS22970	COG0778	Nitroreductase
SD98_RS22975	COG2357	RelA SpoT domain protein
SD98_RS22985	COG1785	Belongs to the alkaline phosphatase family
SD98_RS22995	COG2267	carboxylic ester hydrolase activity
SD98_RS23030	COG1404	Belongs to the peptidase S8 family
SD98_RS23035	COG3186	Phenylalanine-4-hydroxylase
SD98_RS23045	COG2514	catechol 2,3-dioxygenase activity
SD98_RS23050	COG2259	Doxx family
SD98_RS23090	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SD98_RS23100	COG1454	alcohol dehydrogenase
SD98_RS23100	COG1012	belongs to the aldehyde dehydrogenase family
SD98_RS23105	COG0626	cystathionine gamma-synthase activity
SD98_RS23110	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
SD98_RS23135	COG0768	penicillin binding
SD98_RS23155	COG0826	peptidase U32
SD98_RS23160	COG0826	peptidase U32
SD98_RS23165	COG4122	O-methyltransferase activity
SD98_RS23170	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
SD98_RS23185	COG4472	Bacterial protein of unknown function (DUF965)
SD98_RS23200	COG0628	permease
SD98_RS23220	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
SD98_RS23235	COG1104	cysteine desulfurase activity
SD98_RS23240	COG1959	2 iron, 2 sulfur cluster binding
SD98_RS23245	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
SD98_RS23255	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
SD98_RS23285	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
SD98_RS23295	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
SD98_RS23295	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
SD98_RS23300	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
SD98_RS23305	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
SD98_RS23305	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
SD98_RS23315	COG2244	polysaccharide biosynthetic process
SD98_RS23320	COG2323	membrane
SD98_RS23330	COG1862	Preprotein translocase
SD98_RS23360	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
SD98_RS23390	COG0157	Belongs to the NadC ModD family
SD98_RS23395	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
SD98_RS23400	COG1104	cysteine desulfurase activity
SD98_RS23405	COG1827	regulation of RNA biosynthetic process
SD98_RS23410	COG2258	MOSC domain
SD98_RS23420	COG0077	Prephenate dehydratase
SD98_RS23425	COG0577	efflux transmembrane transporter activity
SD98_RS23430	COG0577	efflux transmembrane transporter activity
SD98_RS23435	COG1136	(ABC) transporter
SD98_RS23440	COG5002	protein histidine kinase activity
SD98_RS23445	COG0745	RESPONSE REGULATOR receiver
SD98_RS23455	COG3290	protein histidine kinase activity
SD98_RS23465	COG2868	ribosomal protein
SD98_RS23475	COG1530	ribonuclease E activity
SD98_RS23480	COG1994	Peptidase M50
SD98_RS23485	COG0739	heme binding
SD98_RS23490	COG2894	cell division
SD98_RS23510	COG1077	Cell shape determining protein MreB Mrl
SD98_RS23530	COG0285	dihydrofolate synthase activity
SD98_RS23545	COG1388	LysM domain
SD98_RS23555	COG0113	porphobilinogen synthase activity
SD98_RS23560	COG1587	Uroporphyrinogen-III synthase
SD98_RS23570	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
SD98_RS23580	COG1846	Transcriptional regulator
SD98_RS23585	COG1764	response to oxidative stress
SD98_RS23600	COG0470	DNA polymerase III
SD98_RS23600	COG1067	ATP-dependent peptidase activity
SD98_RS23650	COG0622	Phosphoesterase
SD98_RS23665	COG5401	PFAM Sporulation and spore germination
SD98_RS23685	COG1309	transcriptional regulator
SD98_RS23695	COG2197	response regulator
SD98_RS23750	COG5632	N-Acetylmuramoyl-L-alanine amidase
SD98_RS23825	COG1802	Transcriptional regulator
SD98_RS23825	COG4626	Terminase
SD98_RS23945	COG1396	sequence-specific DNA binding
SD98_RS23945	COG3800	Transcriptional regulator
SD98_RS23955	COG2197	response regulator
SD98_RS23960	COG2233	PERMEase
SD98_RS23965	COG0402	S-adenosylhomocysteine deaminase activity
SD98_RS23970	COG1983	PspC domain protein
SD98_RS23975	COG1396	sequence-specific DNA binding
SD98_RS23980	COG0697	spore germination
SD98_RS23990	COG1959	2 iron, 2 sulfur cluster binding
SD98_RS23995	COG1668	transmembrane transport
SD98_RS24000	COG4152	abc transporter atp-binding protein
SD98_RS24005	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
SD98_RS24010	COG1360	Flagellar Motor Protein
SD98_RS24015	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
SD98_RS24020	COG1876	peptidase activity
SD98_RS24025	COG0824	Thioesterase
SD98_RS24030	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
SD98_RS24035	COG1053	succinate dehydrogenase
SD98_RS24040	COG2009	succinate dehydrogenase
SD98_RS24045	COG1719	4-vinyl reductase, 4VR
SD98_RS24055	COG3118	belongs to the thioredoxin family
SD98_RS24060	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
SD98_RS24065	COG2086	electron transfer activity
SD98_RS24070	COG1024	Enoyl-CoA hydratase
SD98_RS24075	COG1309	transcriptional regulator
SD98_RS24080	COG0318	PFAM AMP-dependent synthetase and ligase
SD98_RS24105	COG2318	DinB family
SD98_RS24125	COG1131	(ABC) transporter
SD98_RS24130	COG2205	protein histidine kinase activity
SD98_RS24135	COG0745	RESPONSE REGULATOR receiver
SD98_RS24145	COG4895	conserved protein (DUF2196)
SD98_RS24150	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
SD98_RS24160	COG4509	Sortase family
SD98_RS24165	COG1120	ATPase activity
SD98_RS24180	COG5386	Cell surface protein
SD98_RS24190	COG5386	Cell surface protein
SD98_RS24195	COG1114	Component of the transport system for branched-chain amino acids
SD98_RS24200	COG1187	pseudouridine synthase activity
SD98_RS24215	COG1796	DNA polymerase
SD98_RS24215	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
SD98_RS24220	COG1286	toxin biosynthetic process
SD98_RS24260	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SD98_RS24270	COG1418	mRNA catabolic process
SD98_RS24285	COG2814	Major facilitator Superfamily
SD98_RS24290	COG1566	PFAM secretion protein HlyD family protein
SD98_RS24295	COG1309	transcriptional regulator
SD98_RS24300	COG1363	Peptidase, m42
SD98_RS24325	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
SD98_RS24340	COG1484	DNA-dependent DNA replication
SD98_RS24345	COG3611	Membrane attachment protein
SD98_RS24355	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
SD98_RS24360	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
SD98_RS24365	COG0237	dephospho-CoA kinase activity
SD98_RS24370	COG1971	Probably functions as a manganese efflux pump
SD98_RS24380	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SD98_RS24380	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SD98_RS24385	COG5002	protein histidine kinase activity
SD98_RS24390	COG0745	RESPONSE REGULATOR receiver
SD98_RS24410	COG0538	isocitrate dehydrogenase activity
SD98_RS24415	COG0372	Belongs to the citrate synthase family
SD98_RS24430	COG0628	permease
SD98_RS24435	COG3030	protein affecting phage T7 exclusion by the F plasmid
SD98_RS24460	COG1725	Transcriptional regulator
SD98_RS24465	COG0281	malic enzyme
SD98_RS24470	COG0587	DNA-directed DNA polymerase activity
SD98_RS24485	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
SD98_RS24500	COG4109	DRTGG domain
SD98_RS24515	COG0006	proline dipeptidase activity
SD98_RS24550	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SD98_RS24555	COG0662	Cupin 2, conserved barrel domain protein
SD98_RS24570	COG1028	Short-chain dehydrogenase reductase Sdr
SD98_RS24575	COG0589	response to stress
SD98_RS24615	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SD98_RS24640	COG0827	DNA restriction-modification system
SD98_RS24645	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
SD98_RS24650	COG3874	Sporulation protein YtfJ
SD98_RS24665	COG1574	metal-dependent hydrolase with the TIM-barrel fold
SD98_RS24675	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
SD98_RS24690	COG1104	cysteine desulfurase activity
SD98_RS24700	COG0583	DNA-binding transcription factor activity
SD98_RS24705	COG0697	spore germination
SD98_RS24710	COG1309	transcriptional regulator
SD98_RS24715	COG1956	GAF domain-containing protein
SD98_RS24720	COG0626	cystathionine gamma-synthase activity
SD98_RS24755	COG0110	maltose O-acetyltransferase activity
SD98_RS24760	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
SD98_RS24765	COG0454	-acetyltransferase
SD98_RS24770	COG0517	IMP dehydrogenase activity
SD98_RS24775	COG0123	including yeast histone deacetylase and acetoin utilization protein
SD98_RS24790	COG0745	RESPONSE REGULATOR receiver
SD98_RS24795	COG5002	protein histidine kinase activity
SD98_RS24800	COG0666	response to abiotic stimulus
SD98_RS24835	COG1609	Transcriptional regulator
SD98_RS24845	COG1605	Chorismate mutase
SD98_RS24845	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
SD98_RS24850	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
SD98_RS24850	COG1605	Chorismate mutase
SD98_RS24855	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
SD98_RS24855	COG1605	Chorismate mutase
SD98_RS24860	COG4851	CamS sex pheromone cAM373 precursor
SD98_RS24865	COG3118	belongs to the thioredoxin family
SD98_RS24895	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SD98_RS24900	COG0697	spore germination
SD98_RS24905	COG0789	Transcriptional regulator
SD98_RS24920	COG1674	ftsk spoiiie
SD98_RS24935	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SD98_RS24945	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SD98_RS24950	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
SD98_RS24955	COG1363	Peptidase, m42
SD98_RS24965	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SD98_RS24980	COG0510	thiamine kinase activity
SD98_RS24985	COG1523	belongs to the glycosyl hydrolase 13 family
SD98_RS24995	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SD98_RS25000	COG1349	DNA-binding transcription factor activity
SD98_RS25005	COG1187	pseudouridine synthase activity
SD98_RS25010	COG2244	polysaccharide biosynthetic process
SD98_RS25015	COG2081	HI0933 family
SD98_RS25020	COG2814	Major facilitator Superfamily
SD98_RS25030	COG3832	glyoxalase III activity
SD98_RS25050	COG1329	Transcriptional regulator
SD98_RS25075	COG0314	molybdopterin synthase activity
SD98_RS25080	COG1763	Mo-molybdopterin cofactor biosynthetic process
SD98_RS25085	COG0303	'Molybdopterin
SD98_RS25095	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
SD98_RS25100	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
SD98_RS25120	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SD98_RS25130	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
SD98_RS25170	COG2814	Major facilitator Superfamily
SD98_RS25175	COG0475	glutathione-regulated potassium exporter activity
SD98_RS25180	COG0490	domain, Protein
SD98_RS25185	COG0582	viral genome integration into host DNA
SD98_RS25195	COG1136	(ABC) transporter
SD98_RS25215	COG1242	4 iron, 4 sulfur cluster binding
SD98_RS25220	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
SD98_RS25225	COG1794	racemase activity, acting on amino acids and derivatives
SD98_RS25240	COG2267	carboxylic ester hydrolase activity
SD98_RS25245	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
SD98_RS25250	COG0671	phosphoesterase, PA-phosphatase related
SD98_RS25255	COG0438	transferase activity, transferring glycosyl groups
SD98_RS25355	COG5002	protein histidine kinase activity
SD98_RS25360	COG3852	Histidine kinase
SD98_RS25365	COG0753	catalase activity
SD98_RS25370	COG2267	carboxylic ester hydrolase activity
SD98_RS25375	COG1368	sulfuric ester hydrolase activity
SD98_RS25390	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
SD98_RS25395	COG1116	anion transmembrane transporter activity
SD98_RS25400	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
SD98_RS25425	COG0494	nUDIX hydrolase
SD98_RS25455	COG2076	Multidrug Resistance protein
SD98_RS25460	COG2076	Multidrug Resistance protein
SD98_RS25465	COG0789	Transcriptional regulator
SD98_RS25470	COG1854	S-ribosylhomocysteine lyase activity
SD98_RS25480	COG0288	reversible hydration of carbon dioxide
SD98_RS25485	COG1271	oxidase subunit
SD98_RS25490	COG1294	oxidase, subunit
SD98_RS25510	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SD98_RS25535	COG1842	Phage shock protein A
SD98_RS25560	COG3859	Proton-coupled thiamine transporter YuaJ
SD98_RS25565	COG5002	protein histidine kinase activity
SD98_RS25570	COG0745	RESPONSE REGULATOR receiver
SD98_RS25595	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
SD98_RS25600	COG1597	lipid kinase activity
SD98_RS25645	COG0586	Pfam SNARE associated Golgi protein
SD98_RS25655	COG0577	efflux transmembrane transporter activity
SD98_RS25660	COG1136	(ABC) transporter
SD98_RS25665	COG3708	Transcriptional regulator
SD98_RS25665	COG2207	Transcriptional regulator
SD98_RS25675	COG1131	(ABC) transporter
SD98_RS25680	COG5658	integral membrane protein
SD98_RS25685	COG0640	Transcriptional regulator
SD98_RS25695	COG0745	RESPONSE REGULATOR receiver
SD98_RS25700	COG2205	protein histidine kinase activity
SD98_RS25705	COG0577	efflux transmembrane transporter activity
SD98_RS25710	COG0577	efflux transmembrane transporter activity
SD98_RS25715	COG1136	(ABC) transporter
SD98_RS25720	COG0577	efflux transmembrane transporter activity
SD98_RS25735	COG2188	Transcriptional regulator
SD98_RS25755	COG3964	amidohydrolase
SD98_RS25775	COG4948	Mandelate Racemase Muconate Lactonizing
SD98_RS25790	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
SD98_RS25795	COG0596	Alpha beta hydrolase
SD98_RS25805	COG1169	isochorismate synthase
SD98_RS25810	COG1575	Belongs to the MenA family. Type 1 subfamily
SD98_RS25815	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
SD98_RS25820	COG1278	Cold shock
SD98_RS25850	COG0058	SHG alpha-glucan phosphorylase activity
SD98_RS25860	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
SD98_RS25865	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
SD98_RS25885	COG1309	transcriptional regulator
SD98_RS26020	COG1285	pathogenesis
SD98_RS26025	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
SD98_RS26045	COG2155	Conserved Protein
SD98_RS26050	COG1098	S1 RNA binding domain
SD98_RS26055	COG0436	Aminotransferase
SD98_RS26060	COG1522	sequence-specific DNA binding
SD98_RS26065	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
SD98_RS26070	COG2267	carboxylic ester hydrolase activity
SD98_RS26080	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
SD98_RS26100	COG5018	Exonuclease
SD98_RS26105	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
SD98_RS26125	COG2050	protein possibly involved in aromatic compounds catabolism
SD98_RS26135	COG1268	BioY protein
SD98_RS26140	COG1210	Utp--glucose-1-phosphate uridylyltransferase
SD98_RS26145	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
SD98_RS26160	COG3584	3D domain protein
SD98_RS26175	COG1252	NADH dehydrogenase
SD98_RS26190	COG3708	Transcriptional regulator
SD98_RS26205	COG1683	Conserved Protein
SD98_RS26230	COG0316	Belongs to the HesB IscA family
SD98_RS26245	COG1252	NADH dehydrogenase
SD98_RS26255	COG2274	protein secretion by the type I secretion system
SD98_RS26260	COG0390	transport system, permease component
SD98_RS26265	COG2824	Alkylphosphonate utilization operon protein PhnA
SD98_RS26290	COG4837	Protein of unknown function (DUF1462)
SD98_RS26295	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
SD98_RS26305	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
SD98_RS26310	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
SD98_RS26330	COG1358	cellular component organization or biogenesis
SD98_RS26340	COG2249	NAD(P)H dehydrogenase (quinone) activity
SD98_RS26345	COG0647	UMP catabolic process
SD98_RS26355	COG2445	Protein of unknown function DUF86
SD98_RS26360	COG1494	fructose-1,6-bisphosphatase
SD98_RS26380	COG4470	Protein conserved in bacteria
SD98_RS26390	COG0789	Transcriptional regulator
SD98_RS26395	COG4377	Putative membrane peptidase family (DUF2324)
SD98_RS26420	COG0739	heme binding
SD98_RS26430	COG3377	Domain of unknown function (DUF1805)
SD98_RS26435	COG0737	Belongs to the 5'-nucleotidase family
SD98_RS26440	COG0719	Fe-S assembly protein
SD98_RS26445	COG0822	iron-sulfur transferase activity
SD98_RS26450	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
SD98_RS26455	COG0719	Fe-S assembly protein
SD98_RS26460	COG0396	ATPase activity
SD98_RS26465	COG1464	Belongs to the NlpA lipoprotein family
SD98_RS26470	COG1464	Belongs to the NlpA lipoprotein family
SD98_RS26475	COG2011	ABC-type metal ion transport system permease component
SD98_RS26490	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SD98_RS26495	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
SD98_RS26505	COG1393	Belongs to the ArsC family
SD98_RS26525	COG0039	L-malate dehydrogenase activity
SD98_RS26540	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SD98_RS26545	COG1960	acyl-CoA dehydrogenase activity
SD98_RS26550	COG0183	Belongs to the thiolase family
SD98_RS26555	COG1024	Enoyl-CoA hydratase
SD98_RS26555	COG1250	3-hydroxyacyl-CoA dehydrogenase
SD98_RS26565	COG1686	Belongs to the peptidase S11 family
SD98_RS26580	COG0011	TIGRFAM Protein of
SD98_RS26585	COG0840	transmembrane signaling receptor activity
SD98_RS26600	COG2814	Major facilitator Superfamily
SD98_RS26605	COG0531	amino acid
SD98_RS26630	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SD98_RS26670	COG0586	Pfam SNARE associated Golgi protein
SD98_RS26680	COG1376	ErfK ybiS ycfS ynhG family protein
SD98_RS26685	COG0745	RESPONSE REGULATOR receiver
SD98_RS26690	COG5002	protein histidine kinase activity
SD98_RS26720	COG0840	transmembrane signaling receptor activity
SD98_RS26725	COG2151	metal-sulfur cluster biosynthetic enzyme
SD98_RS26730	COG3227	Zinc metalloprotease (Elastase)
SD98_RS26750	COG0586	Pfam SNARE associated Golgi protein
SD98_RS26755	COG0475	glutathione-regulated potassium exporter activity
SD98_RS26760	COG0490	domain, Protein
SD98_RS26770	COG1115	amino acid carrier protein
SD98_RS26775	COG0783	Belongs to the Dps family
SD98_RS26795	COG1611	Belongs to the LOG family
SD98_RS26810	COG2311	Membrane
SD98_RS26815	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SD98_RS26820	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SD98_RS26825	COG1115	amino acid carrier protein
SD98_RS26830	COG1115	amino acid carrier protein
SD98_RS26835	COG2910	NAD(P)H-binding
SD98_RS26850	COG0656	L-ascorbic acid biosynthetic process
SD98_RS26855	COG2814	Major facilitator Superfamily
SD98_RS26860	COG1733	regulation of RNA biosynthetic process
SD98_RS26870	COG1252	NADH dehydrogenase
SD98_RS26890	COG0840	transmembrane signaling receptor activity
SD98_RS26890	COG3290	protein histidine kinase activity
SD98_RS26925	COG0488	(ABC) transporter
SD98_RS26930	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SD98_RS26950	COG1335	isochorismatase
SD98_RS26955	COG1522	sequence-specific DNA binding
SD98_RS26965	COG1522	sequence-specific DNA binding
SD98_RS26970	COG0288	reversible hydration of carbon dioxide
SD98_RS26975	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
SD98_RS26980	COG2233	PERMEase
SD98_RS27025	COG0557	exoribonuclease II activity
SD98_RS27040	COG1674	ftsk spoiiie
SD98_RS27055	COG1388	LysM domain
SD98_RS27055	COG5632	N-Acetylmuramoyl-L-alanine amidase
SD98_RS27055	COG3409	Peptidoglycan-binding domain 1 protein
SD98_RS27060	COG4824	toxin secretion phage lysis holin
SD98_RS27120	COG0740	serine-type endopeptidase activity
SD98_RS27130	COG4626	Terminase
SD98_RS27130	COG1802	Transcriptional regulator
SD98_RS27180	COG0582	viral genome integration into host DNA
SD98_RS27275	COG1396	sequence-specific DNA binding
SD98_RS27290	COG0582	viral genome integration into host DNA
SD98_RS27295	COG1647	Serine aminopeptidase, S33
SD98_RS27300	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
SD98_RS27305	COG1346	cytolysis
SD98_RS27340	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
SD98_RS27355	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
SD98_RS27425	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
SD98_RS27440	COG2323	membrane
SD98_RS27450	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
SD98_RS27460	COG0391	Required for morphogenesis under gluconeogenic growth conditions
SD98_RS27470	COG1051	belongs to the nudix hydrolase family
SD98_RS27480	COG0492	ferredoxin-NADP+ reductase activity
SD98_RS27485	COG0457	Tetratricopeptide repeat
SD98_RS27490	COG0110	maltose O-acetyltransferase activity
SD98_RS27510	COG1950	PFAM Membrane protein of
SD98_RS27520	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
SD98_RS27525	COG0556	nucleotide-excision repair
SD98_RS27540	COG0789	Transcriptional regulator
SD98_RS27560	COG0583	DNA-binding transcription factor activity
SD98_RS27570	COG0655	NAD(P)H dehydrogenase (quinone) activity
SD98_RS27580	COG1132	(ABC) transporter
SD98_RS27585	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SD98_RS27590	COG3409	Peptidoglycan-binding domain 1 protein
SD98_RS27590	COG0793	Belongs to the peptidase S41A family
SD98_RS27595	COG2177	Part of the ABC transporter FtsEX involved in
SD98_RS27600	COG2884	Cell division ATP-binding protein ftsE
SD98_RS27615	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
SD98_RS27630	COG1131	(ABC) transporter
SD98_RS27670	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
SD98_RS27675	COG1278	Cold shock
SD98_RS27680	COG1040	competence protein
SD98_RS27685	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
SD98_RS27690	COG0791	NLP P60 protein
SD98_RS27690	COG1388	LysM domain
SD98_RS27695	COG1733	regulation of RNA biosynthetic process
SD98_RS27700	COG1307	EDD domain protein, DegV family
SD98_RS27705	COG1739	Uncharacterized protein family UPF0029
SD98_RS27710	COG1316	TRANSCRIPTIONal
SD98_RS27715	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
SD98_RS27720	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
SD98_RS27725	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SD98_RS27735	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
SD98_RS27735	COG3933	PFAM sigma-54 factor interaction domain-containing protein
SD98_RS27755	COG1486	melibiose metabolic process
SD98_RS27760	COG1447	Phosphotransferase system cellobiose-specific component IIA
SD98_RS27765	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SD98_RS27775	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
SD98_RS27785	COG1447	Phosphotransferase system cellobiose-specific component IIA
SD98_RS27795	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SD98_RS27800	COG1301	dicarboxylic acid transport
SD98_RS27815	COG1511	domain protein
SD98_RS27820	COG0583	DNA-binding transcription factor activity
SD98_RS27835	COG1271	oxidase subunit
SD98_RS27840	COG1294	oxidase, subunit
SD98_RS27845	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
SD98_RS27855	COG1620	l-lactate permease
SD98_RS27865	COG2389	metal-binding protein
SD98_RS27875	COG1368	sulfuric ester hydrolase activity
SD98_RS27885	COG1388	LysM domain
SD98_RS27885	COG0791	NLP P60 protein
SD98_RS27890	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SD98_RS27905	COG1215	transferase activity, transferring glycosyl groups
SD98_RS27915	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
SD98_RS27920	COG1388	LysM domain
SD98_RS27920	COG3584	3D domain protein
SD98_RS27945	COG4715	Zinc finger, swim domain protein
SD98_RS27950	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
SD98_RS27990	COG0577	efflux transmembrane transporter activity
SD98_RS27995	COG1136	(ABC) transporter
SD98_RS28020	COG5002	protein histidine kinase activity
SD98_RS28025	COG0745	RESPONSE REGULATOR receiver
SD98_RS28035	COG1316	TRANSCRIPTIONal
SD98_RS28040	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
SD98_RS28050	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
SD98_RS28060	COG1215	transferase activity, transferring glycosyl groups
SD98_RS28085	COG1215	transferase activity, transferring glycosyl groups
SD98_RS28090	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
SD98_RS28100	COG1210	Utp--glucose-1-phosphate uridylyltransferase
SD98_RS28105	COG4464	protein tyrosine phosphatase activity
SD98_RS28110	COG0489	protein tyrosine kinase activity
SD98_RS28115	COG3944	biosynthesis protein
SD98_RS28120	COG0489	protein tyrosine kinase activity
SD98_RS28135	COG1609	Transcriptional regulator
SD98_RS28145	COG0739	heme binding
SD98_RS28160	COG3279	Response regulator of the LytR AlgR family
SD98_RS28165	COG2385	sporulation resulting in formation of a cellular spore
SD98_RS28180	COG4836	Membrane
SD98_RS28185	COG1007	ATP synthesis coupled electron transport
SD98_RS28190	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SD98_RS28195	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
SD98_RS28205	COG0839	Belongs to the complex I subunit 6 family
SD98_RS28225	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SD98_RS28240	COG3300	MHYT domain
SD98_RS28240	COG5001	Diguanylate cyclase
SD98_RS28290	COG0356	it plays a direct role in the translocation of protons across the membrane
SD98_RS28325	COG0698	ribose 5-phosphate isomerase
SD98_RS28335	COG2190	(PTS) system
SD98_RS28340	COG2259	Doxx family
SD98_RS28345	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
SD98_RS28360	COG0009	L-threonylcarbamoyladenylate synthase
SD98_RS28395	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
SD98_RS28400	COG1494	fructose-1,6-bisphosphatase
SD98_RS28420	COG4821	SIS domain
SD98_RS28440	COG1960	acyl-CoA dehydrogenase activity
SD98_RS28445	COG1960	acyl-CoA dehydrogenase activity
SD98_RS28450	COG1250	3-hydroxyacyl-CoA dehydrogenase
SD98_RS28455	COG0183	Belongs to the thiolase family
SD98_RS28460	COG0247	lactate metabolic process
SD98_RS28460	COG2181	nitrate reductase activity
SD98_RS28465	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
SD98_RS28475	COG3300	MHYT domain
SD98_RS28475	COG5001	Diguanylate cyclase
SD98_RS28490	COG3227	Zinc metalloprotease (Elastase)
SD98_RS28495	COG2197	response regulator
SD98_RS28500	COG4585	Histidine kinase
SD98_RS28505	COG0842	Transport permease protein
SD98_RS28510	COG1131	(ABC) transporter
SD98_RS28515	COG0024	Methionine aminopeptidase
SD98_RS28525	COG2234	aminopeptidase activity
SD98_RS28545	COG1595	DNA-templated transcription, initiation
SD98_RS28555	COG4506	Protein conserved in bacteria
SD98_RS28560	COG1619	proteins homologs of microcin C7 resistance protein MccF
SD98_RS28585	COG2814	Major facilitator Superfamily
SD98_RS28590	COG0789	Transcriptional regulator
SD98_RS28595	COG0584	glycerophosphoryl diester phosphodiesterase
SD98_RS28600	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SD98_RS28610	COG1994	Peptidase M50
SD98_RS28620	COG1078	dGTPase activity
SD98_RS28625	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SD98_RS28630	COG1120	ATPase activity
SD98_RS28635	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SD98_RS28640	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SD98_RS28660	COG0280	phosphate acetyltransferase
SD98_RS28675	COG3773	Cell wall hydrolase
SD98_RS28685	COG2363	Small membrane protein
SD98_RS28695	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
SD98_RS28700	COG2233	PERMEase
SD98_RS28705	COG0561	phosphatase activity
SD98_RS28710	COG2814	Major facilitator Superfamily
SD98_RS28720	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
SD98_RS28725	COG1131	(ABC) transporter
SD98_RS28730	COG2755	lipolytic protein G-D-S-L family
SD98_RS28735	COG1609	Transcriptional regulator
SD98_RS28745	COG0460	homoserine dehydrogenase
SD98_RS28755	COG2873	o-acetylhomoserine
SD98_RS28760	COG1011	Hydrolase
SD98_RS28765	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
SD98_RS28775	COG2197	response regulator
SD98_RS28780	COG4585	Histidine kinase
SD98_RS28780	COG2203	Gaf domain
SD98_RS28785	COG0351	phosphomethylpyrimidine kinase
SD98_RS28790	COG3706	GGDEF domain
SD98_RS28795	COG2879	small protein
SD98_RS28800	COG1966	Carbon starvation protein
SD98_RS28805	COG3279	Response regulator of the LytR AlgR family
SD98_RS28810	COG0477	Major facilitator Superfamily
SD98_RS28820	COG0438	transferase activity, transferring glycosyl groups
SD98_RS28835	COG0840	transmembrane signaling receptor activity
SD98_RS28845	COG1607	acyl-coa hydrolase
SD98_RS28850	COG1216	Glycosyl transferase, family 2
SD98_RS28865	COG1216	Glycosyl transferase, family 2
SD98_RS28880	COG0463	Glycosyl transferase, family 2
SD98_RS28890	COG1309	transcriptional regulator
SD98_RS28895	COG0488	(ABC) transporter
SD98_RS28900	COG1309	transcriptional regulator
SD98_RS28905	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
SD98_RS28910	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
SD98_RS28910	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
SD98_RS28915	COG0628	permease
SD98_RS28935	COG3275	phosphorelay sensor kinase activity
SD98_RS28940	COG2814	Major facilitator Superfamily
SD98_RS28945	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
SD98_RS28950	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
SD98_RS28975	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
SD98_RS28980	COG1272	protein, Hemolysin III
SD98_RS29000	COG1164	Oligoendopeptidase f
SD98_RS29015	COG5002	protein histidine kinase activity
SD98_RS29030	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SD98_RS29035	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
SD98_RS29040	COG4853	Protein conserved in bacteria
SD98_RS29050	COG5002	protein histidine kinase activity
SD98_RS29055	COG0745	RESPONSE REGULATOR receiver
SD98_RS29085	COG0305	Participates in initiation and elongation during chromosome replication
SD98_RS29095	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
SD98_RS29100	COG4241	membrane
SD98_RS29110	COG0629	single-stranded DNA binding
SD98_RS29120	COG0012	GTP binding
SD98_RS29125	COG4481	Protein conserved in bacteria
SD98_RS29130	COG0668	transmembrane transport
SD98_RS29140	COG1475	DNA binding
SD98_RS29145	COG1192	Involved in chromosome partitioning
SD98_RS29170	COG1847	R3H domain protein
SD98_RS29185	COG0230	Belongs to the bacterial ribosomal protein bL34 family
SD98_RS29195	COG0592	DNA-directed DNA polymerase activity
SD98_RS29200	COG2501	S4 domain
SD98_RS29210	COG0187	DNA topoisomerase II activity
SD98_RS29215	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
SD98_RS29245	COG1132	(ABC) transporter
SD98_RS29275	COG2311	Membrane
SD98_RS29295	COG3344	reverse transcriptase
SD98_RS29470	COG1482	cell wall glycoprotein biosynthetic process
SD98_RS29475	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SD98_RS29475	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SD98_RS29475	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SD98_RS29480	COG3711	transcriptional antiterminator
SD98_RS29480	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SD98_RS29485	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
SD98_RS29495	COG1309	transcriptional regulator
SD98_RS29515	COG0456	acetyltransferase
SD98_RS29520	COG0456	acetyltransferase
SD98_RS29530	COG3293	Transposase
SD98_RS29545	COG1131	(ABC) transporter
SD98_RS29550	COG2205	protein histidine kinase activity
SD98_RS29555	COG0745	RESPONSE REGULATOR receiver
SD98_RS29780	COG1674	ftsk spoiiie
SD98_RS29895	COG5632	N-Acetylmuramoyl-L-alanine amidase
SD98_RS29895	COG3409	Peptidoglycan-binding domain 1 protein
SD98_RS30065	COG0457	Tetratricopeptide repeat
SD98_RS30085	COG0657	acetylesterase activity
SD98_RS30100	COG2162	N-hydroxyarylamine O-acetyltransferase activity
SD98_RS30115	COG0840	transmembrane signaling receptor activity
SD98_RS30125	COG2162	N-hydroxyarylamine O-acetyltransferase activity
SD98_RS30165	COG4974	Belongs to the 'phage' integrase family
SD98_RS30180	COG4166	transmembrane transport
SD98_RS30210	COG2002	toxin-antitoxin pair type II binding
SD98_RS30220	COG0776	regulation of translation
SD98_RS30225	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
SD98_RS30250	COG0457	Tetratricopeptide repeat
SD98_RS30335	COG3409	Peptidoglycan-binding domain 1 protein
SD98_RS30335	COG5632	N-Acetylmuramoyl-L-alanine amidase
SD98_RS30420	COG3344	reverse transcriptase
SD98_RS30660	COG0457	Tetratricopeptide repeat
SD98_RS30705	COG0739	heme binding
SD98_RS30860	COG0741	lytic transglycosylase activity
SD98_RS30860	COG0791	NLP P60 protein
SD98_RS31260	COG0741	lytic transglycosylase activity
SD98_RS31260	COG0791	NLP P60 protein
SD98_RS31440	COG0457	Tetratricopeptide repeat
SD98_RS31450	COG1923	regulation of RNA biosynthetic process
SD98_RS31540	COG2162	N-hydroxyarylamine O-acetyltransferase activity
SD98_RS31550	COG0840	transmembrane signaling receptor activity
SD98_RS31560	COG2162	N-hydroxyarylamine O-acetyltransferase activity
SD98_RS31600	COG4974	Belongs to the 'phage' integrase family
SD98_RS31680	COG2814	Major facilitator Superfamily
SD98_RS31695	COG2376	Dihydroxyacetone kinase