BALH_RS00005	SM00382	ATPases associated with a variety of cellular activities
BALH_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
BALH_RS00010	SM00480	DNA polymerase III beta subunit
BALH_RS00025	SM00387	Histidine kinase-like ATPases
BALH_RS00025	SM00433	TopoisomeraseII
BALH_RS00030	SM00434	DNA Topoisomerase IV
BALH_RS00065	SM00116	Domain in cystathionine beta-synthase and other proteins.
BALH_RS00065	SM01240	BALH_RS00065
BALH_RS00070	SM00936	Penicillin-binding protein 5, C-terminal domain 
BALH_RS00125	SM00382	ATPases associated with a variety of cellular activities
BALH_RS00135	SM00493	BALH_RS00135
BALH_RS00220	SM00966	SpoVT / AbrB like domain 
BALH_RS00235	SM00493	BALH_RS00235
BALH_RS00240	SM00650	Ribosomal RNA adenine dimethylases
BALH_RS00285	SM01400	BALH_RS00285
BALH_RS00300	SM00487	DEAD-like helicases superfamily
BALH_RS00300	SM00490	helicase superfamily c-terminal domain
BALH_RS00300	SM00982	BALH_RS00300
BALH_RS00300	SM01058	CarD-like/TRCF domain
BALH_RS00305	SM00966	SpoVT / AbrB like domain 
BALH_RS00320	SM00363	S4 RNA-binding domain
BALH_RS00340	SM00316	Ribosomal protein S1-like RNA-binding domain
BALH_RS00355	SM00331	Sigma factor PP2C-like phosphatases
BALH_RS00355	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BALH_RS00360	SM00977	TilS substrate C-terminal domain
BALH_RS00370	SM00382	ATPases associated with a variety of cellular activities
BALH_RS00410	SM00905	Dihydroneopterin aldolase
BALH_RS00420	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS00525	SM00382	ATPases associated with a variety of cellular activities
BALH_RS00525	SM01086	C-terminal, D2-small domain, of ClpB protein
BALH_RS00530	SM00382	ATPases associated with a variety of cellular activities
BALH_RS00540	SM00670	Large family of predicted nucleotide-binding domains
BALH_RS00565	SM00840	BALH_RS00565
BALH_RS00570	SM00535	Ribonuclease III family
BALH_RS00575	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BALH_RS00585	SM00421	helix_turn_helix, Lux Regulon
BALH_RS00600	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BALH_RS00605	SM00649	Ribosomal protein L11/L12
BALH_RS00635	SM00663	RNA polymerase I subunit A N-terminus
BALH_RS00655	SM00838	Elongation factor G C-terminus
BALH_RS00655	SM00889	Elongation factor G, domain IV
BALH_RS00665	SM01403	BALH_RS00665
BALH_RS00685	SM01382	BALH_RS00685
BALH_RS00685	SM01383	BALH_RS00685
BALH_RS00700	SM00322	K homology RNA-binding domain
BALH_RS00720	SM01374	BALH_RS00720
BALH_RS00725	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BALH_RS00785	SM00316	Ribosomal protein S1-like RNA-binding domain
BALH_RS00805	SM00662	RNA polymerases D
BALH_RS00815	SM00382	ATPases associated with a variety of cellular activities
BALH_RS00820	SM00382	ATPases associated with a variety of cellular activities
BALH_RS00850	SM00646	BALH_RS00850
BALH_RS00865	SM01251	BALH_RS00865
BALH_RS00985	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS00985	SM00895	BALH_RS00985
BALH_RS01000	SM01350	BALH_RS01000
BALH_RS01055	SM00382	ATPases associated with a variety of cellular activities
BALH_RS01055	SM00930	BALH_RS01055
BALH_RS01065	SM00829	Enoylreductase
BALH_RS01115	SM00382	ATPases associated with a variety of cellular activities
BALH_RS01120	SM00382	ATPases associated with a variety of cellular activities
BALH_RS01135	SM00342	helix_turn_helix, arabinose operon control protein
BALH_RS01225	SM00563	Phosphate acyltransferases
BALH_RS01235	SM00354	helix_turn _helix lactose operon repressor
BALH_RS01295	SM00382	ATPases associated with a variety of cellular activities
BALH_RS01325	SM00382	ATPases associated with a variety of cellular activities
BALH_RS01330	SM00382	ATPases associated with a variety of cellular activities
BALH_RS01405	SM00487	DEAD-like helicases superfamily
BALH_RS01405	SM00490	helicase superfamily c-terminal domain
BALH_RS01430	SM01005	Alanine racemase, C-terminal domain
BALH_RS01445	SM00316	Ribosomal protein S1-like RNA-binding domain
BALH_RS01445	SM00732	Likely ribonuclease with RNase H fold.
BALH_RS01455	SM00731	SprT homologues.
BALH_RS01560	SM00382	ATPases associated with a variety of cellular activities
BALH_RS01565	SM00881	CoA binding domain
BALH_RS01580	SM00883	Chaperonin 10 Kd subunit
BALH_RS01595	SM00860	SMI1 / KNR4 family
BALH_RS01630	SM00382	ATPases associated with a variety of cellular activities
BALH_RS01655	SM00448	cheY-homologous receiver domain
BALH_RS01655	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS01660	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS01660	SM00387	Histidine kinase-like ATPases
BALH_RS01660	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS01745	SM00382	ATPases associated with a variety of cellular activities
BALH_RS01750	SM00387	Histidine kinase-like ATPases
BALH_RS01750	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS01755	SM00448	cheY-homologous receiver domain
BALH_RS01755	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS01800	SM01001	AIR carboxylase
BALH_RS01810	SM00998	Adenylosuccinate lyase C-terminus
BALH_RS01825	SM01211	BALH_RS01825
BALH_RS01850	SM00798	AICARFT/IMPCHase bienzyme
BALH_RS01850	SM00851	MGS-like domain
BALH_RS01855	SM01209	BALH_RS01855
BALH_RS01855	SM01210	BALH_RS01855
BALH_RS01865	SM00244	prohibitin homologues
BALH_RS01890	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BALH_RS01890	SM00292	breast cancer carboxy-terminal domain
BALH_RS01890	SM00532	Ligase N family
BALH_RS01920	SM00382	ATPases associated with a variety of cellular activities
BALH_RS01920	SM00930	BALH_RS01920
BALH_RS01960	SM00347	helix_turn_helix multiple antibiotic resistance protein
BALH_RS01980	SM00845	GatB domain
BALH_RS01985	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BALH_RS02000	SM00382	ATPases associated with a variety of cellular activities
BALH_RS02045	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BALH_RS02045	SM00387	Histidine kinase-like ATPases
BALH_RS02045	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS02065	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BALH_RS02110	SM01007	Class II Aldolase and Adducin N-terminal domain
BALH_RS02220	SM00062	Bacterial periplasmic substrate-binding proteins
BALH_RS02220	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BALH_RS02225	SM00382	ATPases associated with a variety of cellular activities
BALH_RS02230	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BALH_RS02230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS02260	SM00100	Cyclic nucleotide-monophosphate binding domain
BALH_RS02260	SM00419	helix_turn_helix, cAMP Regulatory protein
BALH_RS02270	SM00642	Alpha-amylase domain
BALH_RS02290	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BALH_RS02290	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BALH_RS02290	SM00493	BALH_RS02290
BALH_RS02310	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BALH_RS02310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS02330	SM00382	ATPases associated with a variety of cellular activities
BALH_RS02345	SM00060	Fibronectin type 3 domain
BALH_RS02345	SM00636	BALH_RS02345
BALH_RS02345	SM00637	BALH_RS02345
BALH_RS02375	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS02400	SM00946	Prolyl-tRNA synthetase, C-terminal
BALH_RS02445	SM00831	Cation transporter/ATPase, N-terminus
BALH_RS02455	SM00226	Low molecular weight phosphatase family
BALH_RS02545	SM00478	endonuclease III
BALH_RS02565	SM00382	ATPases associated with a variety of cellular activities
BALH_RS02585	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS02640	SM00984	UDP binding domain
BALH_RS02725	SM00478	endonuclease III
BALH_RS02725	SM00525	BALH_RS02725
BALH_RS02750	SM00382	ATPases associated with a variety of cellular activities
BALH_RS02770	SM00382	ATPases associated with a variety of cellular activities
BALH_RS02920	SM00382	ATPases associated with a variety of cellular activities
BALH_RS02955	SM00567	E-Z type HEAT repeats
BALH_RS02970	SM00052	Putative diguanylate phosphodiesterase
BALH_RS02970	SM00091	PAS domain
BALH_RS02970	SM00267	diguanylate cyclase
BALH_RS02980	SM00763	PrkA AAA domain
BALH_RS02995	SM00364	Leucine-rich repeats, bacterial type
BALH_RS02995	SM00365	Leucine-rich repeat, SDS22-like subfamily
BALH_RS02995	SM00369	Leucine-rich repeats, typical (most populated) subfamily
BALH_RS02995	SM00725	NEAr Transporter domain
BALH_RS03010	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
BALH_RS03020	SM00244	prohibitin homologues
BALH_RS03025	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BALH_RS03025	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS03030	SM00091	PAS domain
BALH_RS03030	SM00387	Histidine kinase-like ATPases
BALH_RS03035	SM00448	cheY-homologous receiver domain
BALH_RS03055	SM00248	ankyrin repeats
BALH_RS03065	SM00382	ATPases associated with a variety of cellular activities
BALH_RS03090	SM00448	cheY-homologous receiver domain
BALH_RS03090	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS03095	SM00387	Histidine kinase-like ATPases
BALH_RS03095	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS03110	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BALH_RS03110	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS03115	SM00387	Histidine kinase-like ATPases
BALH_RS03120	SM00448	cheY-homologous receiver domain
BALH_RS03130	SM00919	Malic enzyme, NAD binding domain
BALH_RS03130	SM01274	BALH_RS03130
BALH_RS03145	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS03155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS03155	SM00387	Histidine kinase-like ATPases
BALH_RS03155	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS03160	SM00448	cheY-homologous receiver domain
BALH_RS03160	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS03180	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BALH_RS03180	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BALH_RS03195	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BALH_RS03195	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BALH_RS03205	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BALH_RS03220	SM00028	Tetratricopeptide repeats
BALH_RS03220	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS03265	SM01091	Transporter associated domain
BALH_RS03280	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BALH_RS03310	SM00382	ATPases associated with a variety of cellular activities
BALH_RS03335	SM00327	von Willebrand factor (vWF) type A domain
BALH_RS03340	SM00382	ATPases associated with a variety of cellular activities
BALH_RS03345	SM00155	Phospholipase D. Active site motifs.
BALH_RS03355	SM00052	Putative diguanylate phosphodiesterase
BALH_RS03355	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BALH_RS03355	SM00091	PAS domain
BALH_RS03355	SM00267	diguanylate cyclase
BALH_RS03365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS03365	SM00866	BALH_RS03365
BALH_RS03375	SM00642	Alpha-amylase domain
BALH_RS03395	SM00387	Histidine kinase-like ATPases
BALH_RS03400	SM00421	helix_turn_helix, Lux Regulon
BALH_RS03400	SM00448	cheY-homologous receiver domain
BALH_RS03430	SM00382	ATPases associated with a variety of cellular activities
BALH_RS03435	SM00062	Bacterial periplasmic substrate-binding proteins
BALH_RS03435	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BALH_RS03485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS03485	SM00387	Histidine kinase-like ATPases
BALH_RS03485	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS03490	SM00448	cheY-homologous receiver domain
BALH_RS03490	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS03530	SM00382	ATPases associated with a variety of cellular activities
BALH_RS03535	SM00382	ATPases associated with a variety of cellular activities
BALH_RS03545	SM00347	helix_turn_helix multiple antibiotic resistance protein
BALH_RS03555	SM00354	helix_turn _helix lactose operon repressor
BALH_RS03570	SM00382	ATPases associated with a variety of cellular activities
BALH_RS03600	SM00829	Enoylreductase
BALH_RS03610	SM00770	Zinc dependent phospholipase C (alpha toxin)
BALH_RS03645	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BALH_RS03655	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS03700	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS03800	SM00899	BALH_RS03800
BALH_RS03945	SM00116	Domain in cystathionine beta-synthase and other proteins.
BALH_RS03965	SM00287	Bacterial SH3 domain homologues
BALH_RS03975	SM00382	ATPases associated with a variety of cellular activities
BALH_RS04065	SM00347	helix_turn_helix multiple antibiotic resistance protein
BALH_RS04090	SM00382	ATPases associated with a variety of cellular activities
BALH_RS04125	SM00640	Glycosyl hydrolases family 32
BALH_RS04135	SM00354	helix_turn _helix lactose operon repressor
BALH_RS04195	SM00450	Rhodanese Homology Domain
BALH_RS04205	SM00450	Rhodanese Homology Domain
BALH_RS04210	SM00450	Rhodanese Homology Domain
BALH_RS04210	SM00849	Metallo-beta-lactamase superfamily
BALH_RS04220	SM00450	Rhodanese Homology Domain
BALH_RS04225	SM00450	Rhodanese Homology Domain
BALH_RS04250	SM00829	Enoylreductase
BALH_RS04300	SM00287	Bacterial SH3 domain homologues
BALH_RS04310	SM00382	ATPases associated with a variety of cellular activities
BALH_RS04370	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
BALH_RS04475	SM00344	helix_turn_helix ASNC type
BALH_RS04525	SM01060	BALH_RS04525
BALH_RS04560	SM00382	ATPases associated with a variety of cellular activities
BALH_RS04565	SM00382	ATPases associated with a variety of cellular activities
BALH_RS04570	SM00062	Bacterial periplasmic substrate-binding proteins
BALH_RS04570	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BALH_RS04580	SM00382	ATPases associated with a variety of cellular activities
BALH_RS04645	SM00644	BALH_RS04645
BALH_RS04650	SM00729	Elongator protein 3, MiaB family, Radical SAM
BALH_RS04690	SM00957	SecA DEAD-like domain
BALH_RS04690	SM00958	SecA preprotein cross-linking domain
BALH_RS04755	SM00646	BALH_RS04755
BALH_RS04800	SM00382	ATPases associated with a variety of cellular activities
BALH_RS04805	SM00382	ATPases associated with a variety of cellular activities
BALH_RS04845	SM00860	SMI1 / KNR4 family
BALH_RS04855	SM00091	PAS domain
BALH_RS04855	SM00387	Histidine kinase-like ATPases
BALH_RS04860	SM00448	cheY-homologous receiver domain
BALH_RS04910	SM00487	DEAD-like helicases superfamily
BALH_RS05020	SM00347	helix_turn_helix multiple antibiotic resistance protein
BALH_RS05095	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BALH_RS05115	SM00460	Transglutaminase/protease-like homologues
BALH_RS05180	SM00331	Sigma factor PP2C-like phosphatases
BALH_RS05180	SM00448	cheY-homologous receiver domain
BALH_RS05185	SM00138	Methyltransferase, chemotaxis proteins 
BALH_RS05190	SM00387	Histidine kinase-like ATPases
BALH_RS05190	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS05190	SM00448	cheY-homologous receiver domain
BALH_RS05225	SM00829	Enoylreductase
BALH_RS05235	SM00387	Histidine kinase-like ATPases
BALH_RS05240	SM00421	helix_turn_helix, Lux Regulon
BALH_RS05240	SM00448	cheY-homologous receiver domain
BALH_RS05280	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BALH_RS05315	SM00028	Tetratricopeptide repeats
BALH_RS05340	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS05395	SM00347	helix_turn_helix multiple antibiotic resistance protein
BALH_RS05445	SM00347	helix_turn_helix multiple antibiotic resistance protein
BALH_RS05460	SM00382	ATPases associated with a variety of cellular activities
BALH_RS05655	SM00354	helix_turn _helix lactose operon repressor
BALH_RS05665	SM00849	Metallo-beta-lactamase superfamily
BALH_RS05690	SM00725	NEAr Transporter domain
BALH_RS05725	SM00860	SMI1 / KNR4 family
BALH_RS05760	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BALH_RS05775	SM00342	helix_turn_helix, arabinose operon control protein
BALH_RS05775	SM00871	Bacterial transcription activator, effector binding domain
BALH_RS05780	SM00387	Histidine kinase-like ATPases
BALH_RS05780	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS05785	SM00448	cheY-homologous receiver domain
BALH_RS05785	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS05845	SM00357	Cold shock protein domain
BALH_RS05960	SM01060	BALH_RS05960
BALH_RS05975	SM00642	Alpha-amylase domain
BALH_RS05980	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS05990	SM00316	Ribosomal protein S1-like RNA-binding domain
BALH_RS06040	SM00382	ATPases associated with a variety of cellular activities
BALH_RS06040	SM01086	C-terminal, D2-small domain, of ClpB protein
BALH_RS06070	SM00825	Beta-ketoacyl synthase
BALH_RS06110	SM00382	ATPases associated with a variety of cellular activities
BALH_RS06115	SM00382	ATPases associated with a variety of cellular activities
BALH_RS06155	SM00155	Phospholipase D. Active site motifs.
BALH_RS06185	SM01118	BALH_RS06185
BALH_RS06195	SM00954	Region found in RelA / SpoT proteins
BALH_RS06350	SM00635	Bacterial Ig-like domain 2
BALH_RS06460	SM00861	Transketolase, pyrimidine binding domain
BALH_RS06465	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS06530	SM00382	ATPases associated with a variety of cellular activities
BALH_RS06570	SM00857	Resolvase, N terminal domain
BALH_RS06575	SM00465	GIY-YIG type nucleases (URI domain)
BALH_RS06640	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS06660	SM00382	ATPases associated with a variety of cellular activities
BALH_RS06680	SM00014	Acid phosphatase homologues
BALH_RS06730	SM00448	cheY-homologous receiver domain
BALH_RS06730	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS06735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS06735	SM00387	Histidine kinase-like ATPases
BALH_RS06735	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS06740	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS06740	SM00895	BALH_RS06740
BALH_RS06810	SM00822	BALH_RS06810
BALH_RS06845	SM00382	ATPases associated with a variety of cellular activities
BALH_RS06870	SM00420	helix_turn_helix, Deoxyribose operon repressor
BALH_RS06870	SM01134	BALH_RS06870
BALH_RS06880	SM00365	Leucine-rich repeat, SDS22-like subfamily
BALH_RS06880	SM00369	Leucine-rich repeats, typical (most populated) subfamily
BALH_RS06880	SM00725	NEAr Transporter domain
BALH_RS06885	SM01007	Class II Aldolase and Adducin N-terminal domain
BALH_RS06905	SM00387	Histidine kinase-like ATPases
BALH_RS06905	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS06910	SM00347	helix_turn_helix multiple antibiotic resistance protein
BALH_RS06930	SM00387	Histidine kinase-like ATPases
BALH_RS06930	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS07005	SM00507	HNH nucleases
BALH_RS07020	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS07025	SM00382	ATPases associated with a variety of cellular activities
BALH_RS07035	SM00382	ATPases associated with a variety of cellular activities
BALH_RS07055	SM00344	helix_turn_helix ASNC type
BALH_RS07175	SM00347	helix_turn_helix multiple antibiotic resistance protein
BALH_RS07250	SM00917	LeuA allosteric (dimerisation) domain
BALH_RS07255	SM01329	BALH_RS07255
BALH_RS07440	SM00387	Histidine kinase-like ATPases
BALH_RS07445	SM00421	helix_turn_helix, Lux Regulon
BALH_RS07445	SM00448	cheY-homologous receiver domain
BALH_RS07540	SM00091	PAS domain
BALH_RS07540	SM00387	Histidine kinase-like ATPases
BALH_RS07540	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS07560	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS07560	SM00387	Histidine kinase-like ATPases
BALH_RS07560	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS07610	SM00363	S4 RNA-binding domain
BALH_RS07630	SM00448	cheY-homologous receiver domain
BALH_RS07630	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS07635	SM00091	PAS domain
BALH_RS07635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS07635	SM00387	Histidine kinase-like ATPases
BALH_RS07635	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS07645	SM00257	Lysin motif
BALH_RS07670	SM00487	DEAD-like helicases superfamily
BALH_RS07670	SM00490	helicase superfamily c-terminal domain
BALH_RS07680	SM00257	Lysin motif
BALH_RS07690	SM00422	helix_turn_helix, mercury resistance
BALH_RS07700	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BALH_RS07715	SM00644	BALH_RS07715
BALH_RS07725	SM00870	BALH_RS07725
BALH_RS07740	SM00316	Ribosomal protein S1-like RNA-binding domain
BALH_RS07745	SM01240	BALH_RS07745
BALH_RS07800	SM00411	bacterial (prokaryotic) histone like domain
BALH_RS07825	SM00562	BALH_RS07825
BALH_RS07845	SM00028	Tetratricopeptide repeats
BALH_RS07850	SM00914	BALH_RS07850
BALH_RS07895	SM00986	Uracil DNA glycosylase superfamily
BALH_RS07895	SM00987	UreE urease accessory protein, C-terminal domain 
BALH_RS07915	SM00851	MGS-like domain
BALH_RS07965	SM00479	BALH_RS07965
BALH_RS07965	SM00491	BALH_RS07965
BALH_RS07990	SM00478	endonuclease III
BALH_RS07990	SM00525	BALH_RS07990
BALH_RS08000	SM00060	Fibronectin type 3 domain
BALH_RS08050	SM00981	BALH_RS08050
BALH_RS08060	SM00491	BALH_RS08060
BALH_RS08120	SM00450	Rhodanese Homology Domain
BALH_RS08150	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BALH_RS08150	SM00475	5'-3' exonuclease
BALH_RS08215	SM00357	Cold shock protein domain
BALH_RS08265	SM00849	Metallo-beta-lactamase superfamily
BALH_RS08270	SM00422	helix_turn_helix, mercury resistance
BALH_RS08270	SM00871	Bacterial transcription activator, effector binding domain
BALH_RS08360	SM00448	cheY-homologous receiver domain
BALH_RS08365	SM00073	Histidine Phosphotransfer domain
BALH_RS08365	SM00260	Two component signalling adaptor domain
BALH_RS08365	SM00387	Histidine kinase-like ATPases
BALH_RS08365	SM01231	BALH_RS08365
BALH_RS08385	SM00138	Methyltransferase, chemotaxis proteins 
BALH_RS08460	SM00382	ATPases associated with a variety of cellular activities
BALH_RS08495	SM00260	Two component signalling adaptor domain
BALH_RS08495	SM00448	cheY-homologous receiver domain
BALH_RS08570	SM00382	ATPases associated with a variety of cellular activities
BALH_RS08570	SM00962	SRP54-type protein, GTPase domain
BALH_RS08580	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BALH_RS08645	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS08665	SM00382	ATPases associated with a variety of cellular activities
BALH_RS08680	SM00849	Metallo-beta-lactamase superfamily
BALH_RS08680	SM01027	Beta-Casp domain
BALH_RS08700	SM00835	Cupin
BALH_RS08715	SM00855	Phosphoglycerate mutase family
BALH_RS08735	SM00347	helix_turn_helix multiple antibiotic resistance protein
BALH_RS08775	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS08775	SM00895	BALH_RS08775
BALH_RS08785	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BALH_RS08870	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS08910	SM00421	helix_turn_helix, Lux Regulon
BALH_RS08910	SM00448	cheY-homologous receiver domain
BALH_RS08920	SM00382	ATPases associated with a variety of cellular activities
BALH_RS08935	SM00155	Phospholipase D. Active site motifs.
BALH_RS08955	SM00919	Malic enzyme, NAD binding domain
BALH_RS08955	SM01274	BALH_RS08955
BALH_RS08960	SM00387	Histidine kinase-like ATPases
BALH_RS08965	SM00448	cheY-homologous receiver domain
BALH_RS08970	SM00487	DEAD-like helicases superfamily
BALH_RS08970	SM00490	helicase superfamily c-terminal domain
BALH_RS08995	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS09030	SM00646	BALH_RS09030
BALH_RS09035	SM00047	Lysozyme subfamily 2
BALH_RS09200	SM00854	Bacterial capsule synthesis protein PGA_cap
BALH_RS09240	SM00850	LytTr DNA-binding domain
BALH_RS09270	SM00860	SMI1 / KNR4 family
BALH_RS09300	SM00729	Elongator protein 3, MiaB family, Radical SAM
BALH_RS09310	SM00448	cheY-homologous receiver domain
BALH_RS09310	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS09315	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS09315	SM00387	Histidine kinase-like ATPases
BALH_RS09315	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS09335	SM00450	Rhodanese Homology Domain
BALH_RS09380	SM00382	ATPases associated with a variety of cellular activities
BALH_RS09400	SM00448	cheY-homologous receiver domain
BALH_RS09400	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS09405	SM00387	Histidine kinase-like ATPases
BALH_RS09405	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS09415	SM01133	BALH_RS09415
BALH_RS09425	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
BALH_RS09455	SM01011	Aminopeptidase P, N-terminal domain
BALH_RS09465	SM00287	Bacterial SH3 domain homologues
BALH_RS09475	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BALH_RS09475	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BALH_RS09475	SM00493	BALH_RS09475
BALH_RS09565	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BALH_RS09600	SM00382	ATPases associated with a variety of cellular activities
BALH_RS09605	SM00382	ATPases associated with a variety of cellular activities
BALH_RS09640	SM00347	helix_turn_helix multiple antibiotic resistance protein
BALH_RS09660	SM00382	ATPases associated with a variety of cellular activities
BALH_RS09665	SM00382	ATPases associated with a variety of cellular activities
BALH_RS09695	SM00287	Bacterial SH3 domain homologues
BALH_RS09705	SM00382	ATPases associated with a variety of cellular activities
BALH_RS09710	SM00448	cheY-homologous receiver domain
BALH_RS09710	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS09715	SM00387	Histidine kinase-like ATPases
BALH_RS09715	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS09795	SM00448	cheY-homologous receiver domain
BALH_RS09795	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS09800	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS09800	SM00387	Histidine kinase-like ATPases
BALH_RS09800	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS09870	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS09895	SM00460	Transglutaminase/protease-like homologues
BALH_RS09920	SM00966	SpoVT / AbrB like domain 
BALH_RS09930	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BALH_RS09965	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BALH_RS09965	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS10030	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BALH_RS10100	SM00855	Phosphoglycerate mutase family
BALH_RS10150	SM00155	Phospholipase D. Active site motifs.
BALH_RS10175	SM01091	Transporter associated domain
BALH_RS10250	SM00244	prohibitin homologues
BALH_RS10260	SM00346	helix_turn_helix isocitrate lyase regulation
BALH_RS10295	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BALH_RS10315	SM00855	Phosphoglycerate mutase family
BALH_RS10330	SM01005	Alanine racemase, C-terminal domain
BALH_RS10360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS10505	SM00487	DEAD-like helicases superfamily
BALH_RS10505	SM00490	helicase superfamily c-terminal domain
BALH_RS10525	SM00829	Enoylreductase
BALH_RS10545	SM00849	Metallo-beta-lactamase superfamily
BALH_RS10560	SM00460	Transglutaminase/protease-like homologues
BALH_RS10585	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BALH_RS10605	SM00100	Cyclic nucleotide-monophosphate binding domain
BALH_RS10605	SM00419	helix_turn_helix, cAMP Regulatory protein
BALH_RS10610	SM00729	Elongator protein 3, MiaB family, Radical SAM
BALH_RS10760	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BALH_RS10765	SM00382	ATPases associated with a variety of cellular activities
BALH_RS10795	SM00567	E-Z type HEAT repeats
BALH_RS10795	SM00932	Scaffold protein Nfu/NifU N terminal
BALH_RS10815	SM00836	DALR anticodon binding domain
BALH_RS10815	SM01016	Arginyl tRNA synthetase N terminal dom
BALH_RS10830	SM00028	Tetratricopeptide repeats
BALH_RS10860	SM00327	von Willebrand factor (vWF) type A domain
BALH_RS10875	SM00382	ATPases associated with a variety of cellular activities
BALH_RS10885	SM00028	Tetratricopeptide repeats
BALH_RS10920	SM00857	Resolvase, N terminal domain
BALH_RS11005	SM00448	cheY-homologous receiver domain
BALH_RS11005	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS11010	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS11010	SM00387	Histidine kinase-like ATPases
BALH_RS11010	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS11085	SM00382	ATPases associated with a variety of cellular activities
BALH_RS11150	SM00563	Phosphate acyltransferases
BALH_RS11210	SM00014	Acid phosphatase homologues
BALH_RS11260	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BALH_RS11265	SM00421	helix_turn_helix, Lux Regulon
BALH_RS11265	SM00448	cheY-homologous receiver domain
BALH_RS11275	SM00829	Enoylreductase
BALH_RS11330	SM00382	ATPases associated with a variety of cellular activities
BALH_RS11370	SM01091	Transporter associated domain
BALH_RS11385	SM00387	Histidine kinase-like ATPases
BALH_RS11385	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS11400	SM00882	Coenzyme A transferase
BALH_RS11405	SM00882	Coenzyme A transferase
BALH_RS11420	SM00382	ATPases associated with a variety of cellular activities
BALH_RS11460	SM00219	Tyrosine kinase, catalytic domain
BALH_RS11470	SM00014	Acid phosphatase homologues
BALH_RS11525	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
BALH_RS11680	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BALH_RS11720	SM00823	Phosphopantetheine attachment site
BALH_RS11720	SM00824	Thioesterase
BALH_RS11725	SM00923	MbtH-like protein
BALH_RS11745	SM00411	bacterial (prokaryotic) histone like domain
BALH_RS11790	SM00363	S4 RNA-binding domain
BALH_RS11795	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BALH_RS11805	SM00382	ATPases associated with a variety of cellular activities
BALH_RS11855	SM00849	Metallo-beta-lactamase superfamily
BALH_RS11885	SM00849	Metallo-beta-lactamase superfamily
BALH_RS11905	SM01059	Chloramphenicol acetyltransferase
BALH_RS11930	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS11975	SM00357	Cold shock protein domain
BALH_RS12005	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BALH_RS12040	SM00382	ATPases associated with a variety of cellular activities
BALH_RS12045	SM00382	ATPases associated with a variety of cellular activities
BALH_RS12055	SM00646	BALH_RS12055
BALH_RS12065	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS12090	SM00835	Cupin
BALH_RS12095	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BALH_RS12165	SM01207	BALH_RS12165
BALH_RS12210	SM00849	Metallo-beta-lactamase superfamily
BALH_RS12225	SM00487	DEAD-like helicases superfamily
BALH_RS12225	SM00490	helicase superfamily c-terminal domain
BALH_RS12325	SM00382	ATPases associated with a variety of cellular activities
BALH_RS12380	SM00110	Complement component C1q domain.
BALH_RS12430	SM00347	helix_turn_helix multiple antibiotic resistance protein
BALH_RS12435	SM00855	Phosphoglycerate mutase family
BALH_RS12530	SM00354	helix_turn _helix lactose operon repressor
BALH_RS12605	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS12630	SM00646	BALH_RS12630
BALH_RS12645	SM00382	ATPases associated with a variety of cellular activities
BALH_RS12660	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BALH_RS12660	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS12660	SM00319	Homologues of the ligand binding domain of Tar
BALH_RS12680	SM00450	Rhodanese Homology Domain
BALH_RS12680	SM00849	Metallo-beta-lactamase superfamily
BALH_RS12710	SM00878	Biotin carboxylase C-terminal domain
BALH_RS12770	SM00387	Histidine kinase-like ATPases
BALH_RS12770	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS12775	SM00448	cheY-homologous receiver domain
BALH_RS12775	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS12830	SM00382	ATPases associated with a variety of cellular activities
BALH_RS12850	SM00422	helix_turn_helix, mercury resistance
BALH_RS12850	SM00871	Bacterial transcription activator, effector binding domain
BALH_RS12880	SM00342	helix_turn_helix, arabinose operon control protein
BALH_RS12895	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS12955	SM00448	cheY-homologous receiver domain
BALH_RS12955	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS12960	SM00387	Histidine kinase-like ATPases
BALH_RS12970	SM00382	ATPases associated with a variety of cellular activities
BALH_RS12985	SM00382	ATPases associated with a variety of cellular activities
BALH_RS13015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS13020	SM01209	BALH_RS13020
BALH_RS13155	SM00091	PAS domain
BALH_RS13155	SM00387	Histidine kinase-like ATPases
BALH_RS13155	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS13180	SM00382	ATPases associated with a variety of cellular activities
BALH_RS13190	SM00387	Histidine kinase-like ATPases
BALH_RS13190	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS13205	SM00829	Enoylreductase
BALH_RS13210	SM00014	Acid phosphatase homologues
BALH_RS13215	SM00740	BALH_RS13215
BALH_RS13290	SM00422	helix_turn_helix, mercury resistance
BALH_RS13330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS13380	SM00480	DNA polymerase III beta subunit
BALH_RS13405	SM00855	Phosphoglycerate mutase family
BALH_RS13480	SM00465	GIY-YIG type nucleases (URI domain)
BALH_RS13555	SM00014	Acid phosphatase homologues
BALH_RS13560	SM00642	Alpha-amylase domain
BALH_RS13580	SM00871	Bacterial transcription activator, effector binding domain
BALH_RS13605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS13715	SM00382	ATPases associated with a variety of cellular activities
BALH_RS13735	SM00420	helix_turn_helix, Deoxyribose operon repressor
BALH_RS13735	SM01134	BALH_RS13735
BALH_RS13780	SM00861	Transketolase, pyrimidine binding domain
BALH_RS13845	SM00116	Domain in cystathionine beta-synthase and other proteins.
BALH_RS13845	SM00382	ATPases associated with a variety of cellular activities
BALH_RS13880	SM00060	Fibronectin type 3 domain
BALH_RS13880	SM00495	Chitin-binding domain type 3
BALH_RS13910	SM00849	Metallo-beta-lactamase superfamily
BALH_RS13980	SM00341	Helicase and RNase D C-terminal
BALH_RS13980	SM00487	DEAD-like helicases superfamily
BALH_RS13980	SM00490	helicase superfamily c-terminal domain
BALH_RS13980	SM00956	BALH_RS13980
BALH_RS14030	SM01131	BALH_RS14030
BALH_RS14060	SM01130	BALH_RS14060
BALH_RS14080	SM00091	PAS domain
BALH_RS14080	SM00382	ATPases associated with a variety of cellular activities
BALH_RS14150	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BALH_RS14190	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BALH_RS14195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS14195	SM00387	Histidine kinase-like ATPases
BALH_RS14195	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS14200	SM00448	cheY-homologous receiver domain
BALH_RS14200	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS14240	SM00344	helix_turn_helix ASNC type
BALH_RS14400	SM00382	ATPases associated with a variety of cellular activities
BALH_RS14405	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS14475	SM00062	Bacterial periplasmic substrate-binding proteins
BALH_RS14480	SM00382	ATPases associated with a variety of cellular activities
BALH_RS14500	SM00028	Tetratricopeptide repeats
BALH_RS14590	SM00382	ATPases associated with a variety of cellular activities
BALH_RS14635	SM00830	Chorismate mutase type II
BALH_RS14675	SM00287	Bacterial SH3 domain homologues
BALH_RS14700	SM00091	PAS domain
BALH_RS14700	SM00382	ATPases associated with a variety of cellular activities
BALH_RS14730	SM00382	ATPases associated with a variety of cellular activities
BALH_RS14750	SM01133	BALH_RS14750
BALH_RS14785	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BALH_RS14805	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BALH_RS14820	SM00346	helix_turn_helix isocitrate lyase regulation
BALH_RS14840	SM00098	Alkaline phosphatase homologues
BALH_RS14850	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS14875	SM00850	LytTr DNA-binding domain
BALH_RS14975	SM01060	BALH_RS14975
BALH_RS15005	SM00860	SMI1 / KNR4 family
BALH_RS15020	SM00347	helix_turn_helix multiple antibiotic resistance protein
BALH_RS15025	SM00889	Elongation factor G, domain IV
BALH_RS15050	SM00382	ATPases associated with a variety of cellular activities
BALH_RS15055	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS15060	SM00860	SMI1 / KNR4 family
BALH_RS15070	SM00382	ATPases associated with a variety of cellular activities
BALH_RS15095	SM00342	helix_turn_helix, arabinose operon control protein
BALH_RS15095	SM00871	Bacterial transcription activator, effector binding domain
BALH_RS15120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS15240	SM00797	Allophanate hydrolase subunit 2
BALH_RS15245	SM00796	Allophanate hydrolase subunit 1
BALH_RS15250	SM00346	helix_turn_helix isocitrate lyase regulation
BALH_RS15270	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BALH_RS15330	SM00849	Metallo-beta-lactamase superfamily
BALH_RS15405	SM00870	BALH_RS15405
BALH_RS15410	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS15435	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BALH_RS15435	SM00091	PAS domain
BALH_RS15435	SM00387	Histidine kinase-like ATPases
BALH_RS15435	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS15460	SM00342	helix_turn_helix, arabinose operon control protein
BALH_RS15490	SM00448	cheY-homologous receiver domain
BALH_RS15495	SM00387	Histidine kinase-like ATPases
BALH_RS15635	SM00382	ATPases associated with a variety of cellular activities
BALH_RS15650	SM00421	helix_turn_helix, Lux Regulon
BALH_RS15650	SM00448	cheY-homologous receiver domain
BALH_RS15665	SM00382	ATPases associated with a variety of cellular activities
BALH_RS15685	SM00226	Low molecular weight phosphatase family
BALH_RS15700	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BALH_RS15710	SM00028	Tetratricopeptide repeats
BALH_RS15795	SM00448	cheY-homologous receiver domain
BALH_RS15795	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS15800	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS15800	SM00387	Histidine kinase-like ATPases
BALH_RS15800	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS15855	SM00849	Metallo-beta-lactamase superfamily
BALH_RS15895	SM00422	helix_turn_helix, mercury resistance
BALH_RS15915	SM00382	ATPases associated with a variety of cellular activities
BALH_RS15925	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BALH_RS15940	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS15940	SM00387	Histidine kinase-like ATPases
BALH_RS15940	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS15945	SM00448	cheY-homologous receiver domain
BALH_RS15945	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS15955	SM00347	helix_turn_helix multiple antibiotic resistance protein
BALH_RS15995	SM00450	Rhodanese Homology Domain
BALH_RS15995	SM00849	Metallo-beta-lactamase superfamily
BALH_RS16025	SM00387	Histidine kinase-like ATPases
BALH_RS16025	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS16030	SM00448	cheY-homologous receiver domain
BALH_RS16030	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS16065	SM00354	helix_turn _helix lactose operon repressor
BALH_RS16070	SM00028	Tetratricopeptide repeats
BALH_RS16115	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BALH_RS16115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS16115	SM00319	Homologues of the ligand binding domain of Tar
BALH_RS16165	SM00344	helix_turn_helix ASNC type
BALH_RS16210	SM00342	helix_turn_helix, arabinose operon control protein
BALH_RS16220	SM00860	SMI1 / KNR4 family
BALH_RS16240	SM00287	Bacterial SH3 domain homologues
BALH_RS16240	SM00644	BALH_RS16240
BALH_RS16290	SM00347	helix_turn_helix multiple antibiotic resistance protein
BALH_RS16315	SM00382	ATPases associated with a variety of cellular activities
BALH_RS16325	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BALH_RS16400	SM00382	ATPases associated with a variety of cellular activities
BALH_RS16455	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS16470	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS16495	SM00387	Histidine kinase-like ATPases
BALH_RS16495	SM00421	helix_turn_helix, Lux Regulon
BALH_RS16495	SM00448	cheY-homologous receiver domain
BALH_RS16550	SM00382	ATPases associated with a variety of cellular activities
BALH_RS16565	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS16640	SM01266	BALH_RS16640
BALH_RS16680	SM00028	Tetratricopeptide repeats
BALH_RS16705	SM01091	Transporter associated domain
BALH_RS16710	SM00422	helix_turn_helix, mercury resistance
BALH_RS16750	SM01350	BALH_RS16750
BALH_RS16755	SM00861	Transketolase, pyrimidine binding domain
BALH_RS16790	SM00914	BALH_RS16790
BALH_RS16815	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS16815	SM00866	BALH_RS16815
BALH_RS16835	SM00849	Metallo-beta-lactamase superfamily
BALH_RS16900	SM00248	ankyrin repeats
BALH_RS16905	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BALH_RS16910	SM00636	BALH_RS16910
BALH_RS16980	SM00382	ATPases associated with a variety of cellular activities
BALH_RS17005	SM00849	Metallo-beta-lactamase superfamily
BALH_RS17010	SM00641	Glycosyl hydrolases family 25
BALH_RS17075	SM00849	Metallo-beta-lactamase superfamily
BALH_RS17095	SM00829	Enoylreductase
BALH_RS17200	SM00829	Enoylreductase
BALH_RS17205	SM00855	Phosphoglycerate mutase family
BALH_RS17215	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BALH_RS17215	SM00534	ATPase domain of DNA mismatch repair MUTS family
BALH_RS17230	SM00642	Alpha-amylase domain
BALH_RS17300	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BALH_RS17305	SM00829	Enoylreductase
BALH_RS17315	SM00028	Tetratricopeptide repeats
BALH_RS17385	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
BALH_RS17430	SM00479	BALH_RS17430
BALH_RS17435	SM00357	Cold shock protein domain
BALH_RS17570	SM00852	Probable molybdopterin binding domain
BALH_RS17585	SM00729	Elongator protein 3, MiaB family, Radical SAM
BALH_RS17605	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BALH_RS17605	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BALH_RS17720	SM00382	ATPases associated with a variety of cellular activities
BALH_RS17740	SM00434	DNA Topoisomerase IV
BALH_RS17745	SM00387	Histidine kinase-like ATPases
BALH_RS17745	SM00433	TopoisomeraseII
BALH_RS17755	SM00881	CoA binding domain
BALH_RS17760	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BALH_RS17765	SM00448	cheY-homologous receiver domain
BALH_RS17765	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS17780	SM01207	BALH_RS17780
BALH_RS17795	SM00257	Lysin motif
BALH_RS17795	SM00636	BALH_RS17795
BALH_RS17815	SM00479	BALH_RS17815
BALH_RS17830	SM00382	ATPases associated with a variety of cellular activities
BALH_RS17875	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BALH_RS17945	SM00644	BALH_RS17945
BALH_RS17945	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
BALH_RS17950	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BALH_RS17965	SM00091	PAS domain
BALH_RS17965	SM00387	Histidine kinase-like ATPases
BALH_RS17965	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS17995	SM01058	CarD-like/TRCF domain
BALH_RS18095	SM00382	ATPases associated with a variety of cellular activities
BALH_RS18140	SM00644	BALH_RS18140
BALH_RS18155	SM00382	ATPases associated with a variety of cellular activities
BALH_RS18160	SM00382	ATPases associated with a variety of cellular activities
BALH_RS18175	SM00861	Transketolase, pyrimidine binding domain
BALH_RS18190	SM00382	ATPases associated with a variety of cellular activities
BALH_RS18195	SM00062	Bacterial periplasmic substrate-binding proteins
BALH_RS18210	SM00857	Resolvase, N terminal domain
BALH_RS18235	SM01230	BALH_RS18235
BALH_RS18240	SM00422	helix_turn_helix, mercury resistance
BALH_RS18260	SM00382	ATPases associated with a variety of cellular activities
BALH_RS18295	SM00287	Bacterial SH3 domain homologues
BALH_RS18310	SM00420	helix_turn_helix, Deoxyribose operon repressor
BALH_RS18310	SM01134	BALH_RS18310
BALH_RS18340	SM00636	BALH_RS18340
BALH_RS18355	SM00411	bacterial (prokaryotic) histone like domain
BALH_RS18380	SM00421	helix_turn_helix, Lux Regulon
BALH_RS18390	SM00382	ATPases associated with a variety of cellular activities
BALH_RS18415	SM00342	helix_turn_helix, arabinose operon control protein
BALH_RS18425	SM00478	endonuclease III
BALH_RS18460	SM00052	Putative diguanylate phosphodiesterase
BALH_RS18460	SM00091	PAS domain
BALH_RS18460	SM00267	diguanylate cyclase
BALH_RS18515	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS18525	SM00148	Phospholipase C, catalytic domain (part); domain X
BALH_RS18535	SM00257	Lysin motif
BALH_RS18565	SM00853	MutL C terminal dimerisation domain
BALH_RS18565	SM01340	BALH_RS18565
BALH_RS18570	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BALH_RS18570	SM00534	ATPase domain of DNA mismatch repair MUTS family
BALH_RS18585	SM00729	Elongator protein 3, MiaB family, Radical SAM
BALH_RS18615	SM00322	K homology RNA-binding domain
BALH_RS18615	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BALH_RS18620	SM00382	ATPases associated with a variety of cellular activities
BALH_RS18625	SM00852	Probable molybdopterin binding domain
BALH_RS18675	SM00382	ATPases associated with a variety of cellular activities
BALH_RS18685	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS18685	SM00866	BALH_RS18685
BALH_RS18690	SM00382	ATPases associated with a variety of cellular activities
BALH_RS18690	SM00843	BALH_RS18690
BALH_RS18705	SM00849	Metallo-beta-lactamase superfamily
BALH_RS18715	SM01130	BALH_RS18715
BALH_RS18725	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BALH_RS18755	SM00316	Ribosomal protein S1-like RNA-binding domain
BALH_RS18755	SM00322	K homology RNA-binding domain
BALH_RS18760	SM01387	BALH_RS18760
BALH_RS18765	SM00904	Riboflavin kinase
BALH_RS18800	SM00316	Ribosomal protein S1-like RNA-binding domain
BALH_RS18800	SM00322	K homology RNA-binding domain
BALH_RS18815	SM00507	HNH nucleases
BALH_RS18825	SM00479	BALH_RS18825
BALH_RS18825	SM00481	DNA polymerase alpha chain like domain
BALH_RS18835	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BALH_RS18880	SM00382	ATPases associated with a variety of cellular activities
BALH_RS18880	SM01086	C-terminal, D2-small domain, of ClpB protein
BALH_RS18900	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BALH_RS18900	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BALH_RS18900	SM00493	BALH_RS18900
BALH_RS18910	SM00881	CoA binding domain
BALH_RS18960	SM00382	ATPases associated with a variety of cellular activities
BALH_RS18960	SM00962	SRP54-type protein, GTPase domain
BALH_RS18960	SM00963	SRP54-type protein, helical bundle domain
BALH_RS18970	SM00382	ATPases associated with a variety of cellular activities
BALH_RS18970	SM00962	SRP54-type protein, GTPase domain
BALH_RS18970	SM00963	SRP54-type protein, helical bundle domain
BALH_RS18975	SM00968	SMC proteins Flexible Hinge Domain
BALH_RS18980	SM00358	Double-stranded RNA binding motif
BALH_RS18980	SM00535	Ribonuclease III family
BALH_RS18990	SM00822	BALH_RS18990
BALH_RS18995	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BALH_RS19010	SM00487	DEAD-like helicases superfamily
BALH_RS19010	SM00490	helicase superfamily c-terminal domain
BALH_RS19015	SM01120	BALH_RS19015
BALH_RS19015	SM01121	BALH_RS19015
BALH_RS19035	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
BALH_RS19050	SM00220	Serine/Threonine protein kinases, catalytic domain
BALH_RS19050	SM00740	BALH_RS19050
BALH_RS19055	SM00331	Sigma factor PP2C-like phosphatases
BALH_RS19055	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BALH_RS19080	SM00487	DEAD-like helicases superfamily
BALH_RS19080	SM00490	helicase superfamily c-terminal domain
BALH_RS19090	SM01409	BALH_RS19090
BALH_RS19095	SM00072	Guanylate kinase homologues.
BALH_RS19110	SM00831	Cation transporter/ATPase, N-terminus
BALH_RS19165	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BALH_RS19180	SM00851	MGS-like domain
BALH_RS19180	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BALH_RS19180	SM01209	BALH_RS19180
BALH_RS19185	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BALH_RS19210	SM00363	S4 RNA-binding domain
BALH_RS19235	SM00363	S4 RNA-binding domain
BALH_RS19280	SM00864	Tubulin/FtsZ family, GTPase domain
BALH_RS19280	SM00865	Tubulin/FtsZ family, C-terminal domain
BALH_RS19285	SM00842	Cell division protein FtsA
BALH_RS19325	SM00740	BALH_RS19325
BALH_RS19330	SM00740	BALH_RS19330
BALH_RS19360	SM00717	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
BALH_RS19380	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BALH_RS19420	SM00855	Phosphoglycerate mutase family
BALH_RS19485	SM00878	Biotin carboxylase C-terminal domain
BALH_RS19505	SM00670	Large family of predicted nucleotide-binding domains
BALH_RS19530	SM00838	Elongation factor G C-terminus
BALH_RS19610	SM00861	Transketolase, pyrimidine binding domain
BALH_RS19640	SM00849	Metallo-beta-lactamase superfamily
BALH_RS19705	SM00052	Putative diguanylate phosphodiesterase
BALH_RS19750	SM00267	diguanylate cyclase
BALH_RS19800	SM00387	Histidine kinase-like ATPases
BALH_RS19800	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS19815	SM00354	helix_turn _helix lactose operon repressor
BALH_RS19835	SM00642	Alpha-amylase domain
BALH_RS19840	SM00642	Alpha-amylase domain
BALH_RS19845	SM00382	ATPases associated with a variety of cellular activities
BALH_RS19885	SM00382	ATPases associated with a variety of cellular activities
BALH_RS19970	SM01007	Class II Aldolase and Adducin N-terminal domain
BALH_RS19995	SM00267	diguanylate cyclase
BALH_RS20030	SM01061	CAT RNA binding domain
BALH_RS20040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS20040	SM00866	BALH_RS20040
BALH_RS20055	SM00849	Metallo-beta-lactamase superfamily
BALH_RS20160	SM00387	Histidine kinase-like ATPases
BALH_RS20170	SM00936	Penicillin-binding protein 5, C-terminal domain 
BALH_RS20175	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS20180	SM00382	ATPases associated with a variety of cellular activities
BALH_RS20200	SM00347	helix_turn_helix multiple antibiotic resistance protein
BALH_RS20220	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
BALH_RS20315	SM00354	helix_turn _helix lactose operon repressor
BALH_RS20335	SM00704	CDGSH-type zinc finger. Function unknown.
BALH_RS20365	SM00729	Elongator protein 3, MiaB family, Radical SAM
BALH_RS20365	SM00876	Biotin and Thiamin Synthesis associated domain
BALH_RS20415	SM00347	helix_turn_helix multiple antibiotic resistance protein
BALH_RS20450	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BALH_RS20465	SM00849	Metallo-beta-lactamase superfamily
BALH_RS20490	SM00849	Metallo-beta-lactamase superfamily
BALH_RS20540	SM00382	ATPases associated with a variety of cellular activities
BALH_RS20550	SM00062	Bacterial periplasmic substrate-binding proteins
BALH_RS20550	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BALH_RS20590	SM00861	Transketolase, pyrimidine binding domain
BALH_RS20610	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BALH_RS20625	SM00091	PAS domain
BALH_RS20625	SM00382	ATPases associated with a variety of cellular activities
BALH_RS20650	SM00448	cheY-homologous receiver domain
BALH_RS20660	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BALH_RS20675	SM00363	S4 RNA-binding domain
BALH_RS20680	SM00861	Transketolase, pyrimidine binding domain
BALH_RS20715	SM00878	Biotin carboxylase C-terminal domain
BALH_RS20765	SM00382	ATPases associated with a variety of cellular activities
BALH_RS20785	SM00841	Elongation factor P, C-terminal
BALH_RS20785	SM01185	BALH_RS20785
BALH_RS20820	SM00529	Helix-turn-helix diphteria tox regulatory element
BALH_RS20850	SM00450	Rhodanese Homology Domain
BALH_RS20855	SM00354	helix_turn _helix lactose operon repressor
BALH_RS20910	SM00382	ATPases associated with a variety of cellular activities
BALH_RS20915	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS20945	SM00487	DEAD-like helicases superfamily
BALH_RS20945	SM00490	helicase superfamily c-terminal domain
BALH_RS20980	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
BALH_RS21015	SM00382	ATPases associated with a variety of cellular activities
BALH_RS21065	SM01018	B12 binding domain
BALH_RS21095	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BALH_RS21105	SM00849	Metallo-beta-lactamase superfamily
BALH_RS21145	SM00382	ATPases associated with a variety of cellular activities
BALH_RS21210	SM00382	ATPases associated with a variety of cellular activities
BALH_RS21225	SM00518	AP endonuclease family 2
BALH_RS21230	SM00487	DEAD-like helicases superfamily
BALH_RS21230	SM00490	helicase superfamily c-terminal domain
BALH_RS21265	SM00400	zinc finger
BALH_RS21265	SM00493	BALH_RS21265
BALH_RS21265	SM00766	DNA primase DnaG DnaB-binding
BALH_RS21285	SM00116	Domain in cystathionine beta-synthase and other proteins.
BALH_RS21320	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BALH_RS21355	SM00729	Elongator protein 3, MiaB family, Radical SAM
BALH_RS21370	SM00271	DnaJ molecular chaperone homology domain
BALH_RS21390	SM00729	Elongator protein 3, MiaB family, Radical SAM
BALH_RS21400	SM00838	Elongation factor G C-terminus
BALH_RS21430	SM00849	Metallo-beta-lactamase superfamily
BALH_RS21440	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BALH_RS21460	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BALH_RS21470	SM01103	BALH_RS21470
BALH_RS21535	SM00954	Region found in RelA / SpoT proteins
BALH_RS21545	SM00098	Alkaline phosphatase homologues
BALH_RS21570	SM00855	Phosphoglycerate mutase family
BALH_RS21615	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS21640	SM00382	ATPases associated with a variety of cellular activities
BALH_RS21735	SM00732	Likely ribonuclease with RNase H fold.
BALH_RS21745	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BALH_RS21780	SM00028	Tetratricopeptide repeats
BALH_RS21800	SM00382	ATPases associated with a variety of cellular activities
BALH_RS21840	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BALH_RS21840	SM00954	Region found in RelA / SpoT proteins
BALH_RS21885	SM01323	BALH_RS21885
BALH_RS21905	SM00382	ATPases associated with a variety of cellular activities
BALH_RS21910	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BALH_RS21930	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BALH_RS21945	SM00257	Lysin motif
BALH_RS21995	SM00382	ATPases associated with a variety of cellular activities
BALH_RS22000	SM00387	Histidine kinase-like ATPases
BALH_RS22005	SM00448	cheY-homologous receiver domain
BALH_RS22005	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS22015	SM01317	BALH_RS22015
BALH_RS22105	SM00382	ATPases associated with a variety of cellular activities
BALH_RS22155	SM00257	Lysin motif
BALH_RS22165	SM01004	Delta-aminolevulinic acid dehydratase
BALH_RS22190	SM00347	helix_turn_helix multiple antibiotic resistance protein
BALH_RS22205	SM00382	ATPases associated with a variety of cellular activities
BALH_RS22205	SM00464	Found in ATP-dependent protease La (LON)
BALH_RS22210	SM00382	ATPases associated with a variety of cellular activities
BALH_RS22215	SM00382	ATPases associated with a variety of cellular activities
BALH_RS22215	SM00994	ClpX C4-type zinc finger
BALH_RS22215	SM01086	C-terminal, D2-small domain, of ClpB protein
BALH_RS22270	SM00909	Sporulation and spore germination
BALH_RS22305	SM00421	helix_turn_helix, Lux Regulon
BALH_RS22325	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS22350	SM00382	ATPases associated with a variety of cellular activities
BALH_RS22400	SM00465	GIY-YIG type nucleases (URI domain)
BALH_RS22410	SM00893	Electron transfer flavoprotein domain
BALH_RS22415	SM00893	Electron transfer flavoprotein domain
BALH_RS22475	SM00382	ATPases associated with a variety of cellular activities
BALH_RS22480	SM00387	Histidine kinase-like ATPases
BALH_RS22480	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS22485	SM00448	cheY-homologous receiver domain
BALH_RS22485	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS22500	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BALH_RS22520	SM00382	ATPases associated with a variety of cellular activities
BALH_RS22535	SM00725	NEAr Transporter domain
BALH_RS22540	SM00725	NEAr Transporter domain
BALH_RS22550	SM00363	S4 RNA-binding domain
BALH_RS22560	SM00463	Small MutS-related domain
BALH_RS22560	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BALH_RS22560	SM00534	ATPase domain of DNA mismatch repair MUTS family
BALH_RS22565	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BALH_RS22565	SM00481	DNA polymerase alpha chain like domain
BALH_RS22565	SM00483	DNA polymerase X family
BALH_RS22605	SM00873	B3/4 domain
BALH_RS22605	SM00874	tRNA synthetase B5 domain
BALH_RS22605	SM00896	Ferredoxin-fold anticodon binding domain
BALH_RS22615	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BALH_RS22700	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BALH_RS22710	SM00382	ATPases associated with a variety of cellular activities
BALH_RS22730	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BALH_RS22745	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BALH_RS22745	SM01232	BALH_RS22745
BALH_RS22750	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BALH_RS22750	SM00474	3'-5' exonuclease
BALH_RS22750	SM00475	5'-3' exonuclease
BALH_RS22750	SM00482	DNA polymerase A domain
BALH_RS22755	SM00091	PAS domain
BALH_RS22755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS22755	SM00387	Histidine kinase-like ATPases
BALH_RS22755	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS22760	SM00448	cheY-homologous receiver domain
BALH_RS22760	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS22780	SM01329	BALH_RS22780
BALH_RS22830	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS22835	SM00919	Malic enzyme, NAD binding domain
BALH_RS22835	SM01274	BALH_RS22835
BALH_RS22840	SM00481	DNA polymerase alpha chain like domain
BALH_RS22880	SM00116	Domain in cystathionine beta-synthase and other proteins.
BALH_RS22890	SM00849	Metallo-beta-lactamase superfamily
BALH_RS22950	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS22960	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BALH_RS22960	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BALH_RS23075	SM00981	BALH_RS23075
BALH_RS23115	SM00363	S4 RNA-binding domain
BALH_RS23115	SM01390	BALH_RS23115
BALH_RS23135	SM00860	SMI1 / KNR4 family
BALH_RS23150	SM00363	S4 RNA-binding domain
BALH_RS23180	SM00116	Domain in cystathionine beta-synthase and other proteins.
BALH_RS23200	SM00448	cheY-homologous receiver domain
BALH_RS23200	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS23205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS23205	SM00387	Histidine kinase-like ATPases
BALH_RS23205	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS23210	SM00248	ankyrin repeats
BALH_RS23245	SM00354	helix_turn _helix lactose operon repressor
BALH_RS23305	SM00382	ATPases associated with a variety of cellular activities
BALH_RS23305	SM00843	BALH_RS23305
BALH_RS23345	SM00849	Metallo-beta-lactamase superfamily
BALH_RS23365	SM00642	Alpha-amylase domain
BALH_RS23385	SM00420	helix_turn_helix, Deoxyribose operon repressor
BALH_RS23390	SM00363	S4 RNA-binding domain
BALH_RS23410	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BALH_RS23435	SM01058	CarD-like/TRCF domain
BALH_RS23470	SM00852	Probable molybdopterin binding domain
BALH_RS23485	SM00729	Elongator protein 3, MiaB family, Radical SAM
BALH_RS23505	SM00450	Rhodanese Homology Domain
BALH_RS23585	SM00382	ATPases associated with a variety of cellular activities
BALH_RS23605	SM00729	Elongator protein 3, MiaB family, Radical SAM
BALH_RS23615	SM00382	ATPases associated with a variety of cellular activities
BALH_RS23670	SM00014	Acid phosphatase homologues
BALH_RS23685	SM00852	Probable molybdopterin binding domain
BALH_RS23745	SM00420	helix_turn_helix, Deoxyribose operon repressor
BALH_RS23745	SM01134	BALH_RS23745
BALH_RS23755	SM00387	Histidine kinase-like ATPases
BALH_RS23760	SM00387	Histidine kinase-like ATPases
BALH_RS23760	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS23790	SM00382	ATPases associated with a variety of cellular activities
BALH_RS23850	SM01234	BALH_RS23850
BALH_RS23855	SM00947	Carbonic anhydrase
BALH_RS23875	SM00894	Excalibur calcium-binding domain
BALH_RS23975	SM00899	BALH_RS23975
BALH_RS23985	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS23985	SM00387	Histidine kinase-like ATPases
BALH_RS23985	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS23990	SM00448	cheY-homologous receiver domain
BALH_RS23990	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS24020	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BALH_RS24060	SM00342	helix_turn_helix, arabinose operon control protein
BALH_RS24075	SM00382	ATPases associated with a variety of cellular activities
BALH_RS24080	SM00342	helix_turn_helix, arabinose operon control protein
BALH_RS24080	SM00871	Bacterial transcription activator, effector binding domain
BALH_RS24085	SM00448	cheY-homologous receiver domain
BALH_RS24085	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS24090	SM00387	Histidine kinase-like ATPases
BALH_RS24105	SM00382	ATPases associated with a variety of cellular activities
BALH_RS24125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BALH_RS24125	SM00866	BALH_RS24125
BALH_RS24155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS24155	SM00387	Histidine kinase-like ATPases
BALH_RS24155	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS24160	SM00448	cheY-homologous receiver domain
BALH_RS24160	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS24165	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BALH_RS24205	SM00357	Cold shock protein domain
BALH_RS24245	SM00642	Alpha-amylase domain
BALH_RS24420	SM00316	Ribosomal protein S1-like RNA-binding domain
BALH_RS24430	SM00344	helix_turn_helix ASNC type
BALH_RS24465	SM01298	BALH_RS24465
BALH_RS24470	SM00479	BALH_RS24470
BALH_RS24560	SM00871	Bacterial transcription activator, effector binding domain
BALH_RS24610	SM00382	ATPases associated with a variety of cellular activities
BALH_RS24680	SM00382	ATPases associated with a variety of cellular activities
BALH_RS24735	SM00422	helix_turn_helix, mercury resistance
BALH_RS24750	SM00855	Phosphoglycerate mutase family
BALH_RS24760	SM00729	Elongator protein 3, MiaB family, Radical SAM
BALH_RS24820	SM00382	ATPases associated with a variety of cellular activities
BALH_RS24840	SM00382	ATPases associated with a variety of cellular activities
BALH_RS24840	SM00930	BALH_RS24840
BALH_RS24855	SM00493	BALH_RS24855
BALH_RS24940	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS24950	SM00849	Metallo-beta-lactamase superfamily
BALH_RS24965	SM00382	ATPases associated with a variety of cellular activities
BALH_RS25030	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BALH_RS25030	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS25105	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS25130	SM00448	cheY-homologous receiver domain
BALH_RS25130	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS25135	SM00387	Histidine kinase-like ATPases
BALH_RS25135	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS25155	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BALH_RS25155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS25160	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BALH_RS25160	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS25180	SM00347	helix_turn_helix multiple antibiotic resistance protein
BALH_RS25270	SM01276	BALH_RS25270
BALH_RS25305	SM00363	S4 RNA-binding domain
BALH_RS25315	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
BALH_RS25320	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BALH_RS25355	SM00382	ATPases associated with a variety of cellular activities
BALH_RS25380	SM00382	ATPases associated with a variety of cellular activities
BALH_RS25400	SM00448	cheY-homologous receiver domain
BALH_RS25400	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS25415	SM00316	Ribosomal protein S1-like RNA-binding domain
BALH_RS25415	SM00357	Cold shock protein domain
BALH_RS25415	SM00955	BALH_RS25415
BALH_RS25445	SM01192	BALH_RS25445
BALH_RS25445	SM01193	BALH_RS25445
BALH_RS25465	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BALH_RS25565	SM00028	Tetratricopeptide repeats
BALH_RS25610	SM00382	ATPases associated with a variety of cellular activities
BALH_RS25645	SM00487	DEAD-like helicases superfamily
BALH_RS25645	SM00490	helicase superfamily c-terminal domain
BALH_RS25660	SM00422	helix_turn_helix, mercury resistance
BALH_RS25680	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS25695	SM00422	helix_turn_helix, mercury resistance
BALH_RS25715	SM00382	ATPases associated with a variety of cellular activities
BALH_RS25725	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BALH_RS25725	SM00245	tail specific protease
BALH_RS25735	SM00382	ATPases associated with a variety of cellular activities
BALH_RS25750	SM00937	BALH_RS25750
BALH_RS25755	SM00957	SecA DEAD-like domain
BALH_RS25755	SM00958	SecA preprotein cross-linking domain
BALH_RS25765	SM00357	Cold shock protein domain
BALH_RS25775	SM00487	DEAD-like helicases superfamily
BALH_RS25775	SM00490	helicase superfamily c-terminal domain
BALH_RS25815	SM00984	UDP binding domain
BALH_RS25830	SM00382	ATPases associated with a variety of cellular activities
BALH_RS25835	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
BALH_RS25885	SM00850	LytTr DNA-binding domain
BALH_RS26010	SM00287	Bacterial SH3 domain homologues
BALH_RS26040	SM00287	Bacterial SH3 domain homologues
BALH_RS26070	SM00487	DEAD-like helicases superfamily
BALH_RS26070	SM00490	helicase superfamily c-terminal domain
BALH_RS26120	SM00382	ATPases associated with a variety of cellular activities
BALH_RS26130	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS26155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS26155	SM00387	Histidine kinase-like ATPases
BALH_RS26155	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS26160	SM00448	cheY-homologous receiver domain
BALH_RS26160	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS26215	SM00984	UDP binding domain
BALH_RS26295	SM00382	ATPases associated with a variety of cellular activities
BALH_RS26300	SM00850	LytTr DNA-binding domain
BALH_RS26380	SM00052	Putative diguanylate phosphodiesterase
BALH_RS26380	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BALH_RS26380	SM00091	PAS domain
BALH_RS26380	SM00267	diguanylate cyclase
BALH_RS26400	SM00382	ATPases associated with a variety of cellular activities
BALH_RS26470	SM00226	Low molecular weight phosphatase family
BALH_RS26485	SM00903	Flavin reductase like domain
BALH_RS26520	SM00937	BALH_RS26520
BALH_RS26535	SM00357	Cold shock protein domain
BALH_RS26535	SM00382	ATPases associated with a variety of cellular activities
BALH_RS26535	SM00959	Rho termination factor, N-terminal domain
BALH_RS26555	SM00448	cheY-homologous receiver domain
BALH_RS26605	SM00155	Phospholipase D. Active site motifs.
BALH_RS26615	SM00052	Putative diguanylate phosphodiesterase
BALH_RS26615	SM00267	diguanylate cyclase
BALH_RS26625	SM00530	Helix-turn-helix XRE-family like proteins 
BALH_RS26635	SM00421	helix_turn_helix, Lux Regulon
BALH_RS26635	SM00448	cheY-homologous receiver domain
BALH_RS26650	SM00382	ATPases associated with a variety of cellular activities
BALH_RS26690	SM00836	DALR anticodon binding domain
BALH_RS26690	SM01016	Arginyl tRNA synthetase N terminal dom
BALH_RS26735	SM00422	helix_turn_helix, mercury resistance
BALH_RS26765	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BALH_RS26775	SM00382	ATPases associated with a variety of cellular activities
BALH_RS26820	SM00936	Penicillin-binding protein 5, C-terminal domain 
BALH_RS26865	SM00986	Uracil DNA glycosylase superfamily
BALH_RS26865	SM00987	UreE urease accessory protein, C-terminal domain 
BALH_RS26875	SM00382	ATPases associated with a variety of cellular activities
BALH_RS26885	SM00354	helix_turn _helix lactose operon repressor
BALH_RS26915	SM00100	Cyclic nucleotide-monophosphate binding domain
BALH_RS26925	SM00421	helix_turn_helix, Lux Regulon
BALH_RS26925	SM00448	cheY-homologous receiver domain
BALH_RS26930	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BALH_RS26940	SM00267	diguanylate cyclase
BALH_RS26955	SM00448	cheY-homologous receiver domain
BALH_RS26955	SM00850	LytTr DNA-binding domain
BALH_RS26985	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BALH_RS27010	SM00382	ATPases associated with a variety of cellular activities
BALH_RS27065	SM00448	cheY-homologous receiver domain
BALH_RS27065	SM00850	LytTr DNA-binding domain
BALH_RS27070	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BALH_RS27070	SM00387	Histidine kinase-like ATPases
BALH_RS27125	SM00487	DEAD-like helicases superfamily
BALH_RS27125	SM00490	helicase superfamily c-terminal domain
BALH_RS27135	SM01240	BALH_RS27135
BALH_RS27160	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BALH_RS27165	SM00849	Metallo-beta-lactamase superfamily
BALH_RS27180	SM00091	PAS domain
BALH_RS27180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BALH_RS27180	SM00387	Histidine kinase-like ATPases
BALH_RS27180	SM00388	His Kinase A (phosphoacceptor) domain
BALH_RS27185	SM00448	cheY-homologous receiver domain
BALH_RS27185	SM00862	Transcriptional regulatory protein, C terminal
BALH_RS27210	SM00788	Adenylosuccinate synthetase
BALH_RS27225	SM00267	diguanylate cyclase
BALH_RS27270	SM00470	ParB-like nuclease domain
BALH_RS27280	SM00470	ParB-like nuclease domain
BALH_RS27290	SM01228	BALH_RS27290
BALH_RS27300	SM00393	Putative single-stranded nucleic acids-binding domain
BALH_RS27300	SM01245	BALH_RS27300
