locus-tag	class	description
NYR47_RS00010	COG0592	DNA-directed DNA polymerase activity
NYR47_RS00015	COG2501	S4 domain
NYR47_RS00025	COG0187	DNA topoisomerase II activity
NYR47_RS00030	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NYR47_RS00065	COG0516	GMP reductase activity
NYR47_RS00065	COG0517	IMP dehydrogenase activity
NYR47_RS00070	COG1686	Belongs to the peptidase S11 family
NYR47_RS00100	COG1428	Deoxynucleoside kinase
NYR47_RS00105	COG1428	Deoxynucleoside kinase
NYR47_RS00110	COG1335	isochorismatase
NYR47_RS00115	COG0590	tRNA wobble adenosine to inosine editing
NYR47_RS00125	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NYR47_RS00180	COG1982	Orn Lys Arg decarboxylase major
NYR47_RS00190	COG0470	DNA polymerase III
NYR47_RS00195	COG1774	PSP1 C-terminal conserved region
NYR47_RS00205	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
NYR47_RS00215	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
NYR47_RS00220	COG2002	toxin-antitoxin pair type II binding
NYR47_RS00230	COG0084	hydrolase, TatD family'
NYR47_RS00240	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
NYR47_RS00250	COG4466	Protein conserved in bacteria
NYR47_RS00265	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NYR47_RS00270	COG0251	oxidation-reduction process
NYR47_RS00275	COG2088	sporulation resulting in formation of a cellular spore
NYR47_RS00300	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NYR47_RS00305	COG2002	toxin-antitoxin pair type II binding
NYR47_RS00310	COG2244	polysaccharide biosynthetic process
NYR47_RS00315	COG3956	TIGRFAM MazG family protein
NYR47_RS00320	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
NYR47_RS00340	COG1098	S1 RNA binding domain
NYR47_RS00355	COG2208	phosphoserine phosphatase activity
NYR47_RS00365	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
NYR47_RS00370	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NYR47_RS00385	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
NYR47_RS00390	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
NYR47_RS00395	COG0512	Glutamine amidotransferase of anthranilate synthase
NYR47_RS00400	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
NYR47_RS00405	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
NYR47_RS00410	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NYR47_RS00415	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
NYR47_RS00420	COG1396	sequence-specific DNA binding
NYR47_RS00425	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NYR47_RS00515	COG3880	PFAM UvrB UvrC protein
NYR47_RS00525	COG0542	response to heat
NYR47_RS00530	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
NYR47_RS00540	COG4956	integral membrane protein (PIN domain superfamily)
NYR47_RS00560	COG1045	serine acetyltransferase
NYR47_RS00575	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NYR47_RS00580	COG3688	RNA-binding protein containing a PIN domain
NYR47_RS00590	COG0267	Belongs to the bacterial ribosomal protein bL33 family
NYR47_RS00595	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
NYR47_RS00600	COG0250	Participates in transcription elongation, termination and antitermination
NYR47_RS00605	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
NYR47_RS00610	COG0081	regulation of translation
NYR47_RS00620	COG0222	ribosome binding
NYR47_RS00625	COG2813	Specifically methylates the guanine in position
NYR47_RS00640	COG1358	cellular component organization or biogenesis
NYR47_RS00645	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
NYR47_RS00665	COG0051	transcription antitermination factor activity, RNA binding
NYR47_RS00670	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
NYR47_RS00710	COG0255	Belongs to the universal ribosomal protein uL29 family
NYR47_RS00760	COG1841	ribosomal large subunit assembly
NYR47_RS00770	COG0201	protein transport
NYR47_RS00780	COG0024	Methionine aminopeptidase
NYR47_RS00790	COG0257	Belongs to the bacterial ribosomal protein bL36 family
NYR47_RS00825	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NYR47_RS00850	COG0860	N-Acetylmuramoyl-L-alanine amidase
NYR47_RS00855	COG0489	protein tyrosine kinase activity
NYR47_RS00865	COG2194	sulfuric ester hydrolase activity
NYR47_RS00870	COG0726	polysaccharide deacetylase
NYR47_RS00950	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
NYR47_RS00955	COG4856	YbbR-like protein
NYR47_RS00980	COG4946	Tricorn protease homolog
NYR47_RS00980	COG1506	peptidase
NYR47_RS00980	COG0823	Involved in the tonB-independent uptake of proteins
NYR47_RS01000	COG2011	ABC-type metal ion transport system permease component
NYR47_RS01005	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NYR47_RS01010	COG1464	Belongs to the NlpA lipoprotein family
NYR47_RS01025	COG0277	FAD linked oxidase domain protein
NYR47_RS01030	COG2271	Major facilitator Superfamily
NYR47_RS01040	COG2814	Major facilitator Superfamily
NYR47_RS01055	COG0601	transmembrane transport
NYR47_RS01060	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NYR47_RS01065	COG0444	Belongs to the ABC transporter superfamily
NYR47_RS01070	COG4608	Belongs to the ABC transporter superfamily
NYR47_RS01075	COG4166	transmembrane transport
NYR47_RS01085	COG2207	Transcriptional regulator
NYR47_RS01095	COG1309	transcriptional regulator
NYR47_RS01105	COG4166	transmembrane transport
NYR47_RS01110	COG4166	transmembrane transport
NYR47_RS01115	COG0656	L-ascorbic acid biosynthetic process
NYR47_RS01135	COG4149	molybdate abc transporter
NYR47_RS01140	COG0725	ABC transporter, periplasmic molybdate-binding protein
NYR47_RS01145	COG1910	domain protein
NYR47_RS01160	COG0697	spore germination
NYR47_RS01175	COG0204	Acyl-transferase
NYR47_RS01185	COG1609	Transcriptional regulator
NYR47_RS01195	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NYR47_RS01210	COG5298	Protein conserved in bacteria
NYR47_RS01235	COG0488	(ABC) transporter
NYR47_RS01245	COG0747	negative chemotaxis
NYR47_RS01250	COG0601	transmembrane transport
NYR47_RS01255	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NYR47_RS01260	COG0444	Belongs to the ABC transporter superfamily
NYR47_RS01265	COG4608	Belongs to the ABC transporter superfamily
NYR47_RS01270	COG0561	phosphatase activity
NYR47_RS01300	COG3185	4-Hydroxyphenylpyruvate dioxygenase
NYR47_RS01305	COG0179	Fumarylacetoacetate (FAA) hydrolase
NYR47_RS01315	COG0531	amino acid
NYR47_RS01320	COG2814	Major facilitator Superfamily
NYR47_RS01330	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
NYR47_RS01340	COG4294	response to UV
NYR47_RS01345	COG0705	Rhomboid family
NYR47_RS01355	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
NYR47_RS01360	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NYR47_RS01365	COG0864	Transcriptional regulator
NYR47_RS01370	COG2337	Toxic component of a toxin-antitoxin (TA) module
NYR47_RS01375	COG2183	response to ionizing radiation
NYR47_RS01475	COG0802	atpase or kinase
NYR47_RS01480	COG1214	PFAM Peptidase M22, glycoprotease
NYR47_RS01485	COG0456	acetyltransferase
NYR47_RS01495	COG0488	(ABC) transporter
NYR47_RS01510	COG1266	CAAX protease self-immunity
NYR47_RS01520	COG0459	protein refolding
NYR47_RS01535	COG2252	PERMEase
NYR47_RS01545	COG5002	protein histidine kinase activity
NYR47_RS01570	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
NYR47_RS01610	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NYR47_RS01620	COG1215	transferase activity, transferring glycosyl groups
NYR47_RS01640	COG0697	spore germination
NYR47_RS01685	COG2205	protein histidine kinase activity
NYR47_RS01690	COG0745	RESPONSE REGULATOR receiver
NYR47_RS01715	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NYR47_RS01720	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NYR47_RS01725	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NYR47_RS01735	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NYR47_RS01750	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
NYR47_RS01760	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NYR47_RS01765	COG0138	bifunctional purine biosynthesis protein purh
NYR47_RS01770	COG0151	Belongs to the GarS family
NYR47_RS01795	COG0210	DNA helicase
NYR47_RS01805	COG4851	CamS sex pheromone cAM373 precursor
NYR47_RS01820	COG1335	isochorismatase
NYR47_RS01830	COG2011	ABC-type metal ion transport system permease component
NYR47_RS01835	COG1464	Belongs to the NlpA lipoprotein family
NYR47_RS01850	COG0003	Pfam Anion-transporting ATPase
NYR47_RS01855	COG1846	Transcriptional regulator
NYR47_RS01860	COG4682	membrane
NYR47_RS01880	COG1597	lipid kinase activity
NYR47_RS01885	COG0546	phosphoglycolate phosphatase activity
NYR47_RS01890	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NYR47_RS01900	COG1012	belongs to the aldehyde dehydrogenase family
NYR47_RS01905	COG2076	Multidrug Resistance protein
NYR47_RS01915	COG2309	aminopeptidase activity
NYR47_RS01930	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NYR47_RS01940	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NYR47_RS01945	COG5002	protein histidine kinase activity
NYR47_RS01955	COG4807	Protein conserved in bacteria
NYR47_RS01980	COG1757	Na H antiporter
NYR47_RS01985	COG1473	amidohydrolase
NYR47_RS02000	COG0450	alkyl hydroperoxide reductase
NYR47_RS02020	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NYR47_RS02025	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NYR47_RS02030	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NYR47_RS02035	COG0492	ferredoxin-NADP+ reductase activity
NYR47_RS02045	COG0166	Belongs to the GPI family
NYR47_RS02070	COG5002	protein histidine kinase activity
NYR47_RS02090	COG3541	Predicted nucleotidyltransferase
NYR47_RS02100	COG2814	Major facilitator Superfamily
NYR47_RS02105	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NYR47_RS02105	COG0723	plastoquinol--plastocyanin reductase activity
NYR47_RS02115	COG0765	amino acid transport
NYR47_RS02120	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NYR47_RS02130	COG0840	transmembrane signaling receptor activity
NYR47_RS02155	COG0549	Belongs to the carbamate kinase family
NYR47_RS02170	COG0277	FAD linked oxidase domain protein
NYR47_RS02175	COG0366	Alpha amylase catalytic
NYR47_RS02180	COG1263	PTS System
NYR47_RS02180	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NYR47_RS02180	COG2190	(PTS) system
NYR47_RS02210	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NYR47_RS02215	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
NYR47_RS02235	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NYR47_RS02245	COG1116	anion transmembrane transporter activity
NYR47_RS02295	COG2270	Major facilitator Superfamily
NYR47_RS02335	COG4193	domain, Protein
NYR47_RS02345	COG2310	stress, protein
NYR47_RS02350	COG2310	stress, protein
NYR47_RS02355	COG2310	stress, protein
NYR47_RS02360	COG0861	Integral membrane protein TerC family
NYR47_RS02370	COG3853	Toxic anion resistance protein (TelA)
NYR47_RS02385	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NYR47_RS02395	COG1295	ribonuclease BN
NYR47_RS02400	COG2217	Heavy metal translocating P-type atpase
NYR47_RS02405	COG0697	spore germination
NYR47_RS02425	COG0586	Pfam SNARE associated Golgi protein
NYR47_RS02440	COG3871	stress protein (general stress protein 26)
NYR47_RS02445	COG0387	Pfam Sodium calcium exchanger
NYR47_RS02455	COG0535	radical SAM domain protein
NYR47_RS02475	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
NYR47_RS02495	COG3829	transcription factor binding
NYR47_RS02505	COG0833	amino acid
NYR47_RS02510	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NYR47_RS02535	COG1263	PTS System
NYR47_RS02535	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NYR47_RS02540	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
NYR47_RS02560	COG0463	Glycosyl transferase, family 2
NYR47_RS02570	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NYR47_RS02570	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NYR47_RS02575	COG0463	Glycosyl transferase, family 2
NYR47_RS02585	COG1882	Formate acetyltransferase
NYR47_RS02590	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NYR47_RS02610	COG1228	amidohydrolase
NYR47_RS02615	COG1090	epimerase
NYR47_RS02645	COG1988	membrane-bound metal-dependent
NYR47_RS02650	COG1194	a g-specific adenine glycosylase
NYR47_RS02670	COG3557	Belongs to the UPF0374 family
NYR47_RS02675	COG1132	(ABC) transporter
NYR47_RS02680	COG4129	membrane
NYR47_RS02685	COG0069	glutamate synthase activity
NYR47_RS02685	COG0070	glutamate synthase
NYR47_RS02685	COG0067	glutamate synthase
NYR47_RS02690	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
NYR47_RS02695	COG4555	ABC transporter
NYR47_RS02715	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
NYR47_RS02720	COG0735	belongs to the Fur family
NYR47_RS02850	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
NYR47_RS02875	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
NYR47_RS02880	COG1716	ATPase activity
NYR47_RS02880	COG5001	Diguanylate cyclase
NYR47_RS02885	COG2766	serine protein kinase
NYR47_RS02890	COG2718	Belongs to the UPF0229 family
NYR47_RS02905	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
NYR47_RS02915	COG1585	Membrane protein implicated in regulation of membrane protease activity
NYR47_RS02920	COG2268	Band 7 protein
NYR47_RS02930	COG3290	protein histidine kinase activity
NYR47_RS02935	COG4565	transcriptional regulatory protein
NYR47_RS02940	COG2851	Citrate transporter
NYR47_RS02965	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
NYR47_RS02970	COG3842	ATPase activity
NYR47_RS02975	COG1175	transmembrane transport
NYR47_RS02980	COG0395	ABC-type sugar transport system, permease component
NYR47_RS02990	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
NYR47_RS02995	COG0745	RESPONSE REGULATOR receiver
NYR47_RS03000	COG5002	protein histidine kinase activity
NYR47_RS03010	COG4990	cell redox homeostasis
NYR47_RS03020	COG3290	protein histidine kinase activity
NYR47_RS03025	COG4565	transcriptional regulatory protein
NYR47_RS03030	COG3493	citrate carrier protein
NYR47_RS03035	COG0281	malic enzyme
NYR47_RS03045	COG0697	spore germination
NYR47_RS03050	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NYR47_RS03060	COG5002	protein histidine kinase activity
NYR47_RS03065	COG0745	RESPONSE REGULATOR receiver
NYR47_RS03075	COG0454	-acetyltransferase
NYR47_RS03075	COG0456	acetyltransferase
NYR47_RS03080	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
NYR47_RS03085	COG3383	formate dehydrogenase (NAD+) activity
NYR47_RS03090	COG2427	Protein of unknown function (DUF1641)
NYR47_RS03105	COG0531	amino acid
NYR47_RS03115	COG0640	Transcriptional regulator
NYR47_RS03120	COG2217	Heavy metal translocating P-type atpase
NYR47_RS03125	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NYR47_RS03140	COG3227	Zinc metalloprotease (Elastase)
NYR47_RS03160	COG2720	vancomycin resistance protein
NYR47_RS03165	COG1316	TRANSCRIPTIONal
NYR47_RS03170	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NYR47_RS03175	COG0346	lactoylglutathione lyase activity
NYR47_RS03180	COG1253	flavin adenine dinucleotide binding
NYR47_RS03185	COG1027	Aspartate ammonia-lyase
NYR47_RS03190	COG1620	l-lactate permease
NYR47_RS03205	COG3104	oligopeptide transport
NYR47_RS03210	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NYR47_RS03215	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NYR47_RS03220	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NYR47_RS03230	COG2226	methyltransferase
NYR47_RS03240	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NYR47_RS03250	COG4548	von Willebrand factor, type A
NYR47_RS03255	COG0714	Associated with various cellular activities
NYR47_RS03280	COG0531	amino acid
NYR47_RS03285	COG2188	Transcriptional regulator
NYR47_RS03290	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NYR47_RS03290	COG1263	PTS System
NYR47_RS03295	COG0366	Alpha amylase catalytic
NYR47_RS03310	COG0697	spore germination
NYR47_RS03315	COG4585	Histidine kinase
NYR47_RS03320	COG2197	response regulator
NYR47_RS03325	COG1404	Belongs to the peptidase S8 family
NYR47_RS03335	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
NYR47_RS03340	COG1115	amino acid carrier protein
NYR47_RS03345	COG1126	abc transporter atp-binding protein
NYR47_RS03350	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NYR47_RS03355	COG0765	amino acid transport
NYR47_RS03360	COG0765	amino acid transport
NYR47_RS03365	COG0833	amino acid
NYR47_RS03390	COG2378	regulation of single-species biofilm formation
NYR47_RS03395	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NYR47_RS03400	COG5002	protein histidine kinase activity
NYR47_RS03415	COG0659	secondary active sulfate transmembrane transporter activity
NYR47_RS03430	COG2271	Major facilitator Superfamily
NYR47_RS03435	COG1846	Transcriptional regulator
NYR47_RS03440	COG0477	Major facilitator Superfamily
NYR47_RS03445	COG1609	Transcriptional regulator
NYR47_RS03450	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NYR47_RS03465	COG1172	Belongs to the binding-protein-dependent transport system permease family
NYR47_RS03470	COG1879	ABC-type sugar transport system periplasmic component
NYR47_RS03500	COG1063	alcohol dehydrogenase
NYR47_RS03550	COG0840	transmembrane signaling receptor activity
NYR47_RS03555	COG1388	LysM domain
NYR47_RS03555	COG3584	3D domain protein
NYR47_RS03560	COG1476	TRANSCRIPTIONal
NYR47_RS03580	COG3104	oligopeptide transport
NYR47_RS03585	COG1114	Component of the transport system for branched-chain amino acids
NYR47_RS03600	COG1113	amino acid transport
NYR47_RS03605	COG2252	PERMEase
NYR47_RS03630	COG0475	glutathione-regulated potassium exporter activity
NYR47_RS03630	COG0569	domain protein
NYR47_RS03645	COG1845	cytochrome c oxidase, subunit III
NYR47_RS03650	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
NYR47_RS03655	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
NYR47_RS03660	COG0833	amino acid
NYR47_RS03665	COG4990	cell redox homeostasis
NYR47_RS03680	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NYR47_RS03685	COG0697	spore germination
NYR47_RS03690	COG0531	amino acid
NYR47_RS03700	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
NYR47_RS03705	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
NYR47_RS03710	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
NYR47_RS03710	COG1918	ferrous iron import across plasma membrane
NYR47_RS03715	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
NYR47_RS03720	COG0573	inorganic phosphate transmembrane transporter activity
NYR47_RS03725	COG0581	inorganic phosphate transmembrane transporter activity
NYR47_RS03735	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NYR47_RS03855	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
NYR47_RS03875	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
NYR47_RS03880	COG1116	anion transmembrane transporter activity
NYR47_RS03885	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NYR47_RS03890	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NYR47_RS03895	COG0352	thiamine-phosphate diphosphorylase activity
NYR47_RS03900	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NYR47_RS03905	COG2104	thiamine diphosphate biosynthetic process
NYR47_RS03910	COG2022	thiamine diphosphate biosynthetic process
NYR47_RS03915	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NYR47_RS03920	COG0351	phosphomethylpyrimidine kinase
NYR47_RS03950	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
NYR47_RS03955	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
NYR47_RS03960	COG2205	protein histidine kinase activity
NYR47_RS03965	COG2814	Major facilitator Superfamily
NYR47_RS03970	COG1846	Transcriptional regulator
NYR47_RS03985	COG1172	Belongs to the binding-protein-dependent transport system permease family
NYR47_RS03990	COG1129	ABC transporter
NYR47_RS04000	COG2252	PERMEase
NYR47_RS04005	COG1028	Short-chain dehydrogenase reductase Sdr
NYR47_RS04065	COG0778	Nitroreductase
NYR47_RS04070	COG2719	SpoVR family
NYR47_RS04095	COG1937	Protein conserved in bacteria
NYR47_RS04100	COG0425	Belongs to the sulfur carrier protein TusA family
NYR47_RS04100	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NYR47_RS04105	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NYR47_RS04105	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NYR47_RS04110	COG0425	Belongs to the sulfur carrier protein TusA family
NYR47_RS04115	COG0425	Belongs to the sulfur carrier protein TusA family
NYR47_RS04115	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NYR47_RS04120	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NYR47_RS04125	COG2210	Belongs to the sulfur carrier protein TusA family
NYR47_RS04130	COG0730	response to heat
NYR47_RS04140	COG1316	TRANSCRIPTIONal
NYR47_RS04145	COG0604	alcohol dehydrogenase
NYR47_RS04150	COG1283	sodium-dependent phosphate transmembrane transporter activity
NYR47_RS04155	COG2814	Major facilitator Superfamily
NYR47_RS04165	COG3711	transcriptional antiterminator
NYR47_RS04165	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NYR47_RS04170	COG1447	Phosphotransferase system cellobiose-specific component IIA
NYR47_RS04175	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
NYR47_RS04195	COG1388	LysM domain
NYR47_RS04195	COG3584	3D domain protein
NYR47_RS04200	COG0577	efflux transmembrane transporter activity
NYR47_RS04205	COG1136	(ABC) transporter
NYR47_RS04215	COG5522	Integral membrane protein (intg_mem_TP0381)
NYR47_RS04230	COG1114	Component of the transport system for branched-chain amino acids
NYR47_RS04235	COG3546	catalase activity
NYR47_RS04270	COG0586	Pfam SNARE associated Golgi protein
NYR47_RS04315	COG0531	amino acid
NYR47_RS04320	COG0475	glutathione-regulated potassium exporter activity
NYR47_RS04330	COG1737	Transcriptional regulator
NYR47_RS04340	COG1263	PTS System
NYR47_RS04340	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NYR47_RS04350	COG2259	Doxx family
NYR47_RS04370	COG1522	sequence-specific DNA binding
NYR47_RS04400	COG2076	Multidrug Resistance protein
NYR47_RS04405	COG1309	transcriptional regulator
NYR47_RS04410	COG2814	Major facilitator Superfamily
NYR47_RS04415	COG1733	regulation of RNA biosynthetic process
NYR47_RS04425	COG2249	NAD(P)H dehydrogenase (quinone) activity
NYR47_RS04435	COG4533	DNA binding
NYR47_RS04440	COG2211	Major facilitator Superfamily
NYR47_RS04450	COG0693	protein deglycase activity
NYR47_RS04460	COG0531	amino acid
NYR47_RS04465	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
NYR47_RS04470	COG1012	belongs to the aldehyde dehydrogenase family
NYR47_RS04475	COG1132	(ABC) transporter
NYR47_RS04480	COG1132	(ABC) transporter
NYR47_RS04485	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NYR47_RS04490	COG0765	amino acid transport
NYR47_RS04495	COG1126	abc transporter atp-binding protein
NYR47_RS04510	COG0189	ligase activity
NYR47_RS04530	COG0028	Belongs to the TPP enzyme family
NYR47_RS04535	COG3527	Alpha-acetolactate decarboxylase
NYR47_RS04545	COG0561	phosphatase activity
NYR47_RS04555	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NYR47_RS04570	COG0586	Pfam SNARE associated Golgi protein
NYR47_RS04580	COG0789	Transcriptional regulator
NYR47_RS04580	COG4978	Transcriptional regulator
NYR47_RS04590	COG0659	secondary active sulfate transmembrane transporter activity
NYR47_RS04600	COG1024	Enoyl-CoA hydratase
NYR47_RS04620	COG1363	Peptidase, m42
NYR47_RS04650	COG0579	oxidoreductase
NYR47_RS04670	COG0601	transmembrane transport
NYR47_RS04675	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NYR47_RS04680	COG0444	Belongs to the ABC transporter superfamily
NYR47_RS04685	COG4608	Belongs to the ABC transporter superfamily
NYR47_RS04825	COG0477	Major facilitator Superfamily
NYR47_RS04830	COG3290	protein histidine kinase activity
NYR47_RS04835	COG4565	transcriptional regulatory protein
NYR47_RS04840	COG3181	Tripartite tricarboxylate transporter family receptor
NYR47_RS04880	COG0305	Participates in initiation and elongation during chromosome replication
NYR47_RS04890	COG1012	belongs to the aldehyde dehydrogenase family
NYR47_RS04915	COG0477	Major facilitator Superfamily
NYR47_RS04955	COG5632	N-Acetylmuramoyl-L-alanine amidase
NYR47_RS04955	COG3409	Peptidoglycan-binding domain 1 protein
NYR47_RS04965	COG3711	transcriptional antiterminator
NYR47_RS04970	COG1263	PTS System
NYR47_RS04970	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NYR47_RS04970	COG2190	(PTS) system
NYR47_RS04975	COG2723	6-phospho-beta-galactosidase activity
NYR47_RS04985	COG1183	phosphatidylcholine synthase activity
NYR47_RS05010	COG2814	Major facilitator Superfamily
NYR47_RS05015	COG0640	Transcriptional regulator
NYR47_RS05040	COG2376	Dihydroxyacetone kinase
NYR47_RS05050	COG2376	Dihydroxyacetone kinase
NYR47_RS05060	COG1959	2 iron, 2 sulfur cluster binding
NYR47_RS05075	COG0745	RESPONSE REGULATOR receiver
NYR47_RS05080	COG3850	Histidine kinase
NYR47_RS05080	COG5002	protein histidine kinase activity
NYR47_RS05120	COG3237	CsbD-like
NYR47_RS05145	COG1191	sigma factor activity
NYR47_RS05155	COG2208	phosphoserine phosphatase activity
NYR47_RS05160	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
NYR47_RS05165	COG0784	Response regulator, receiver
NYR47_RS05165	COG2205	protein histidine kinase activity
NYR47_RS05165	COG5002	protein histidine kinase activity
NYR47_RS05225	COG0420	3'-5' exonuclease activity
NYR47_RS05230	COG4717	serine-type aminopeptidase activity
NYR47_RS05260	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
NYR47_RS05265	COG0346	lactoylglutathione lyase activity
NYR47_RS05270	COG0346	lactoylglutathione lyase activity
NYR47_RS05275	COG0457	Tetratricopeptide repeat
NYR47_RS05310	COG3620	sequence-specific DNA binding
NYR47_RS05315	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
NYR47_RS05320	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
NYR47_RS05330	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
NYR47_RS05350	COG0772	Belongs to the SEDS family
NYR47_RS05365	COG0477	Major facilitator Superfamily
NYR47_RS05370	COG0477	Major facilitator Superfamily
NYR47_RS05380	COG1033	growth of symbiont in host cell
NYR47_RS05380	COG2409	Drug exporters of the RND superfamily
NYR47_RS05390	COG3973	AAA domain
NYR47_RS05395	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NYR47_RS05420	COG0537	adenosine 5'-monophosphoramidase activity
NYR47_RS05425	COG1131	(ABC) transporter
NYR47_RS05430	COG4473	ABC transporter
NYR47_RS05445	COG2222	sugar isomerase
NYR47_RS05455	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NYR47_RS05460	COG3715	PTS system
NYR47_RS05465	COG3716	PTS system mannose fructose sorbose family IID component
NYR47_RS05470	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NYR47_RS05470	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
NYR47_RS05485	COG3684	Belongs to the aldolase LacD family
NYR47_RS05495	COG2188	Transcriptional regulator
NYR47_RS05500	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NYR47_RS05515	COG0247	lactate metabolic process
NYR47_RS05520	COG1139	Iron-sulfur cluster binding protein
NYR47_RS05525	COG1556	Lactate utilization protein
NYR47_RS05535	COG1309	transcriptional regulator
NYR47_RS05545	COG3402	PFAM membrane-flanked domain
NYR47_RS05550	COG3428	Bacterial PH domain
NYR47_RS05600	COG3402	PFAM membrane-flanked domain
NYR47_RS05605	COG3428	Bacterial PH domain
NYR47_RS05610	COG2329	Antibiotic biosynthesis monooxygenase
NYR47_RS05615	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NYR47_RS05630	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
NYR47_RS05665	COG1309	transcriptional regulator
NYR47_RS05670	COG1511	domain protein
NYR47_RS05720	COG1609	Transcriptional regulator
NYR47_RS05730	COG1234	tRNA 3'-trailer cleavage
NYR47_RS05735	COG0095	Lipoate-protein ligase
NYR47_RS05745	COG0318	PFAM AMP-dependent synthetase and ligase
NYR47_RS05770	COG1408	metallophosphoesterase
NYR47_RS05775	COG1078	dGTPase activity
NYR47_RS05785	COG1595	DNA-templated transcription, initiation
NYR47_RS05790	COG3708	Transcriptional regulator
NYR47_RS05790	COG2207	Transcriptional regulator
NYR47_RS05795	COG2205	protein histidine kinase activity
NYR47_RS05800	COG0745	RESPONSE REGULATOR receiver
NYR47_RS05825	COG0501	Belongs to the peptidase M48B family
NYR47_RS05830	COG0840	transmembrane signaling receptor activity
NYR47_RS05835	COG0697	spore germination
NYR47_RS05840	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
NYR47_RS05845	COG2224	Isocitrate lyase
NYR47_RS05860	COG1278	Cold shock
NYR47_RS05875	COG4903	ComK protein
NYR47_RS05880	COG0398	Pfam SNARE associated Golgi protein
NYR47_RS05940	COG0179	Fumarylacetoacetate (FAA) hydrolase
NYR47_RS05965	COG0367	asparagine synthase
NYR47_RS05975	COG0753	catalase activity
NYR47_RS05980	COG0004	ammonium transporteR
NYR47_RS06005	COG2996	Protein conserved in bacteria
NYR47_RS06030	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NYR47_RS06045	COG0561	phosphatase activity
NYR47_RS06055	COG0542	response to heat
NYR47_RS06065	COG2267	carboxylic ester hydrolase activity
NYR47_RS06080	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NYR47_RS06085	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
NYR47_RS06090	COG5504	Zn-dependent protease
NYR47_RS06100	COG0180	Tryptophanyl-tRNA synthetase
NYR47_RS06110	COG4166	transmembrane transport
NYR47_RS06115	COG0601	transmembrane transport
NYR47_RS06120	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NYR47_RS06125	COG0444	Belongs to the ABC transporter superfamily
NYR47_RS06130	COG4608	Belongs to the ABC transporter superfamily
NYR47_RS06135	COG0534	Mate efflux family protein
NYR47_RS06140	COG4166	transmembrane transport
NYR47_RS06155	COG0861	Integral membrane protein TerC family
NYR47_RS06165	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NYR47_RS06175	COG1164	Oligoendopeptidase f
NYR47_RS06185	COG2346	COG2346, Truncated hemoglobins
NYR47_RS06190	COG4116	CYTH
NYR47_RS06200	COG2357	RelA SpoT domain protein
NYR47_RS06210	COG0564	pseudouridine synthase activity
NYR47_RS06225	COG0772	Belongs to the SEDS family
NYR47_RS06230	COG1216	Glycosyl transferase, family 2
NYR47_RS06250	COG0463	Glycosyl transferase, family 2
NYR47_RS06250	COG0457	Tetratricopeptide repeat
NYR47_RS06270	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
NYR47_RS06285	COG1091	dTDP-4-dehydrorhamnose reductase activity
NYR47_RS06330	COG2153	protein acetylation
NYR47_RS06340	COG2382	esterase
NYR47_RS06355	COG5492	domain, Protein
NYR47_RS06360	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NYR47_RS06370	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NYR47_RS06370	COG0512	Glutamine amidotransferase of anthranilate synthase
NYR47_RS06375	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NYR47_RS06390	COG0133	tryptophan synthase activity
NYR47_RS06405	COG1620	l-lactate permease
NYR47_RS06410	COG5634	Uncharacterized conserved protein (DUF2278)
NYR47_RS06490	COG0508	dehydrogenase complex catalyzes the overall conversion of
NYR47_RS06500	COG1476	TRANSCRIPTIONal
NYR47_RS06540	COG4152	abc transporter atp-binding protein
NYR47_RS06545	COG1668	transmembrane transport
NYR47_RS06585	COG1686	Belongs to the peptidase S11 family
NYR47_RS06590	COG0681	Belongs to the peptidase S26 family
NYR47_RS06625	COG1012	belongs to the aldehyde dehydrogenase family
NYR47_RS06635	COG1176	ABC-type spermidine putrescine transport system, permease component I
NYR47_RS06640	COG1177	transmembrane transport
NYR47_RS06645	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
NYR47_RS06655	COG2409	Drug exporters of the RND superfamily
NYR47_RS06665	COG0564	pseudouridine synthase activity
NYR47_RS06675	COG2340	Cysteine-rich secretory protein family
NYR47_RS06680	COG0247	lactate metabolic process
NYR47_RS06685	COG0277	FAD linked oxidase domain protein
NYR47_RS06690	COG3835	regulator
NYR47_RS06700	COG0745	RESPONSE REGULATOR receiver
NYR47_RS06705	COG5002	protein histidine kinase activity
NYR47_RS06710	COG2186	Transcriptional regulator
NYR47_RS06730	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
NYR47_RS06740	COG2116	formate transmembrane transporter activity
NYR47_RS06745	COG0861	Integral membrane protein TerC family
NYR47_RS06750	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
NYR47_RS06760	COG2030	dehydratase
NYR47_RS06780	COG1028	Short-chain dehydrogenase reductase Sdr
NYR47_RS06785	COG3243	poly(R)-hydroxyalkanoic acid synthase
NYR47_RS06795	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
NYR47_RS06810	COG1840	ABC-type Fe3 transport system, periplasmic component
NYR47_RS06815	COG3842	ATPase activity
NYR47_RS06840	COG1349	DNA-binding transcription factor activity
NYR47_RS06850	COG0235	Class ii aldolase
NYR47_RS06860	COG2861	carbohydrate metabolic process
NYR47_RS06870	COG3852	Histidine kinase
NYR47_RS06875	COG1846	Transcriptional regulator
NYR47_RS06885	COG2318	DinB family
NYR47_RS06895	COG5002	protein histidine kinase activity
NYR47_RS06905	COG0720	synthase
NYR47_RS06920	COG4873	Protein conserved in bacteria
NYR47_RS06935	COG0456	acetyltransferase
NYR47_RS06950	COG1780	Probably involved in ribonucleotide reductase function
NYR47_RS06965	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NYR47_RS06970	COG0531	amino acid
NYR47_RS06975	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
NYR47_RS06990	COG2204	response regulator
NYR47_RS06995	COG1012	belongs to the aldehyde dehydrogenase family
NYR47_RS07005	COG1725	Transcriptional regulator
NYR47_RS07010	COG1131	(ABC) transporter
NYR47_RS07020	COG1131	(ABC) transporter
NYR47_RS07025	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
NYR47_RS07040	COG1522	sequence-specific DNA binding
NYR47_RS07050	COG1335	isochorismatase
NYR47_RS07060	COG1619	proteins homologs of microcin C7 resistance protein MccF
NYR47_RS07065	COG2070	2-Nitropropane dioxygenase
NYR47_RS07070	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
NYR47_RS07080	COG1696	Membrane protein involved in D-alanine export
NYR47_RS07105	COG0716	FMN binding
NYR47_RS07140	COG0534	Mate efflux family protein
NYR47_RS07165	COG1846	Transcriptional regulator
NYR47_RS07175	COG1301	dicarboxylic acid transport
NYR47_RS07180	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
NYR47_RS07185	COG4709	membrane
NYR47_RS07190	COG3874	Sporulation protein YtfJ
NYR47_RS07210	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
NYR47_RS07215	COG0028	Belongs to the TPP enzyme family
NYR47_RS07220	COG0440	acetolactate synthase activity
NYR47_RS07240	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NYR47_RS07270	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
NYR47_RS07280	COG0107	imidazoleglycerol-phosphate synthase activity
NYR47_RS07290	COG0140	phosphoribosyl-ATP diphosphatase activity
NYR47_RS07295	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
NYR47_RS07305	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NYR47_RS07310	COG1183	phosphatidylcholine synthase activity
NYR47_RS07315	COG1368	sulfuric ester hydrolase activity
NYR47_RS07325	COG0019	diaminopimelate decarboxylase activity
NYR47_RS07345	COG0529	Catalyzes the synthesis of activated sulfate
NYR47_RS07350	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NYR47_RS07370	COG1648	precorrin-2 dehydrogenase activity
NYR47_RS07375	COG0733	neurotransmitter:sodium symporter activity
NYR47_RS07405	COG1757	Na H antiporter
NYR47_RS07420	COG4758	membrane
NYR47_RS07425	COG4585	Histidine kinase
NYR47_RS07430	COG2197	response regulator
NYR47_RS07440	COG1114	Component of the transport system for branched-chain amino acids
NYR47_RS07450	COG2226	methyltransferase
NYR47_RS07490	COG0730	response to heat
NYR47_RS07495	COG0306	phosphate transporter
NYR47_RS07500	COG1392	Phosphate transport regulator
NYR47_RS07505	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NYR47_RS07520	COG3852	Histidine kinase
NYR47_RS07525	COG1801	Protein of unknown function DUF72
NYR47_RS07535	COG0582	viral genome integration into host DNA
NYR47_RS07540	COG5002	protein histidine kinase activity
NYR47_RS07555	COG0392	lysyltransferase activity
NYR47_RS07555	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
NYR47_RS07570	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
NYR47_RS07575	COG1686	Belongs to the peptidase S11 family
NYR47_RS07580	COG2715	membrane protein required for spore maturation
NYR47_RS07585	COG0700	Nucleoside recognition
NYR47_RS07590	COG1187	pseudouridine synthase activity
NYR47_RS07600	COG1333	cytochrome c biogenesis protein
NYR47_RS07605	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
NYR47_RS07610	COG0745	RESPONSE REGULATOR receiver
NYR47_RS07615	COG5002	protein histidine kinase activity
NYR47_RS07620	COG2096	Adenosyltransferase
NYR47_RS07625	COG4942	peptidase
NYR47_RS07635	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
NYR47_RS07640	COG1141	Ferredoxin
NYR47_RS07645	COG4955	Helix-turn-helix domain
NYR47_RS07650	COG0514	ATP-dependent DNA helicase (RecQ)
NYR47_RS07655	COG1266	CAAX protease self-immunity
NYR47_RS07665	COG1408	metallophosphoesterase
NYR47_RS07670	COG0789	Transcriptional regulator
NYR47_RS07675	COG4862	establishment of competence for transformation
NYR47_RS07680	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
NYR47_RS07700	COG0492	ferredoxin-NADP+ reductase activity
NYR47_RS07775	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
NYR47_RS07790	COG0142	geranyltranstransferase activity
NYR47_RS07800	COG0142	geranyltranstransferase activity
NYR47_RS07830	COG0457	Tetratricopeptide repeat
NYR47_RS07850	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
NYR47_RS07855	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
NYR47_RS07855	COG2010	Cytochrome c
NYR47_RS07860	COG4347	Protein of unknown function (DUF1405)
NYR47_RS07875	COG2738	Putative neutral zinc metallopeptidase
NYR47_RS07885	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NYR47_RS07890	COG1694	Mazg nucleotide pyrophosphohydrolase
NYR47_RS07905	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
NYR47_RS07910	COG0438	transferase activity, transferring glycosyl groups
NYR47_RS07945	COG1199	ATP-dependent helicase activity
NYR47_RS07945	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
NYR47_RS07965	COG3935	DnaD domain protein
NYR47_RS07970	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NYR47_RS07980	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NYR47_RS07980	COG4499	WXG100 protein secretion system (Wss), protein YukC
NYR47_RS08025	COG3599	regulation of cell shape
NYR47_RS08035	COG0116	Belongs to the methyltransferase superfamily
NYR47_RS08045	COG1199	ATP-dependent helicase activity
NYR47_RS08050	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
NYR47_RS08065	COG0024	Methionine aminopeptidase
NYR47_RS08075	COG2233	PERMEase
NYR47_RS08080	COG2311	Membrane
NYR47_RS08090	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
NYR47_RS08100	COG0456	acetyltransferase
NYR47_RS08135	COG0754	glutathionylspermidine amidase activity
NYR47_RS08150	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NYR47_RS08165	COG0454	-acetyltransferase
NYR47_RS08185	COG0328	RNA-DNA hybrid ribonuclease activity
NYR47_RS08220	COG3403	YqcI/YcgG family
NYR47_RS08225	COG1280	lysine exporter protein (LysE YggA)
NYR47_RS08240	COG3162	membrane
NYR47_RS08245	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NYR47_RS08250	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NYR47_RS08265	COG0475	glutathione-regulated potassium exporter activity
NYR47_RS08270	COG0789	Transcriptional regulator
NYR47_RS08270	COG4978	Transcriptional regulator
NYR47_RS08280	COG2323	membrane
NYR47_RS08285	COG1434	Gram-negative-bacterium-type cell wall biogenesis
NYR47_RS08315	COG2814	Major facilitator Superfamily
NYR47_RS08335	COG1923	regulation of RNA biosynthetic process
NYR47_RS08345	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
NYR47_RS08350	COG1360	Flagellar Motor Protein
NYR47_RS08355	COG2201	protein-glutamate methylesterase activity
NYR47_RS08360	COG2198	Histidine kinase
NYR47_RS08360	COG0643	Histidine kinase
NYR47_RS08365	COG1776	CheC inhibitor of MCP methylation
NYR47_RS08365	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
NYR47_RS08380	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
NYR47_RS08400	COG1256	bacterial-type flagellum assembly
NYR47_RS08405	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
NYR47_RS08425	COG1815	bacterial-type flagellum-dependent cell motility
NYR47_RS08430	COG1558	bacterial-type flagellum-dependent cell motility
NYR47_RS08440	COG1766	The M ring may be actively involved in energy transduction
NYR47_RS08445	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
NYR47_RS08455	COG1157	protein secretion by the type III secretion system
NYR47_RS08475	COG1749	Flagellar hook protein flgE
NYR47_RS08490	COG0835	chemotaxis
NYR47_RS08490	COG0784	Response regulator, receiver
NYR47_RS08500	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
NYR47_RS08505	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
NYR47_RS08510	COG0741	lytic transglycosylase activity
NYR47_RS08520	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
NYR47_RS08525	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
NYR47_RS08525	COG1776	CheC inhibitor of MCP methylation
NYR47_RS08535	COG1338	Plays a role in the flagellum-specific transport system
NYR47_RS08540	COG1987	bacterial-type flagellum assembly
NYR47_RS08550	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NYR47_RS08555	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NYR47_RS08560	COG1419	protein localization to endoplasmic reticulum
NYR47_RS08565	COG4786	Flagellar basal body rod
NYR47_RS08570	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NYR47_RS08605	COG2329	Antibiotic biosynthesis monooxygenase
NYR47_RS08620	COG2814	Major facilitator Superfamily
NYR47_RS08630	COG0583	DNA-binding transcription factor activity
NYR47_RS08635	COG3842	ATPase activity
NYR47_RS08640	COG1840	ABC-type Fe3 transport system, periplasmic component
NYR47_RS08685	COG0406	alpha-ribazole phosphatase activity
NYR47_RS08705	COG1846	Transcriptional regulator
NYR47_RS08715	COG0367	asparagine synthase
NYR47_RS08745	COG1802	Transcriptional regulator
NYR47_RS08750	COG0697	spore germination
NYR47_RS08760	COG0523	cobalamin synthesis protein
NYR47_RS08765	COG0438	transferase activity, transferring glycosyl groups
NYR47_RS08765	COG1216	Glycosyl transferase, family 2
NYR47_RS08770	COG1757	Na H antiporter
NYR47_RS08780	COG4221	oxidoreductase activity
NYR47_RS08805	COG0534	Mate efflux family protein
NYR47_RS08810	COG3340	Belongs to the peptidase S51 family
NYR47_RS08830	COG0785	Cytochrome C biogenesis protein
NYR47_RS08835	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NYR47_RS08855	COG2733	membrane
NYR47_RS08890	COG1131	(ABC) transporter
NYR47_RS08910	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NYR47_RS08915	COG0528	UMP kinase activity
NYR47_RS08925	COG1027	Aspartate ammonia-lyase
NYR47_RS08930	COG0281	malic enzyme
NYR47_RS08935	COG4191	Histidine kinase
NYR47_RS08940	COG0784	Response regulator, receiver
NYR47_RS08945	COG1846	Transcriptional regulator
NYR47_RS08955	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
NYR47_RS09020	COG0477	Major facilitator Superfamily
NYR47_RS09025	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NYR47_RS09035	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NYR47_RS09040	COG2223	nitrite transmembrane transporter activity
NYR47_RS09045	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
NYR47_RS09060	COG2244	polysaccharide biosynthetic process
NYR47_RS09065	COG0733	neurotransmitter:sodium symporter activity
NYR47_RS09075	COG5566	PFAM Mor transcription activator
NYR47_RS09080	COG2323	membrane
NYR47_RS09105	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NYR47_RS09115	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
NYR47_RS09120	COG0028	Belongs to the TPP enzyme family
NYR47_RS09140	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NYR47_RS09165	COG2814	Major facilitator Superfamily
NYR47_RS09170	COG3384	dioxygenase
NYR47_RS09195	COG4166	transmembrane transport
NYR47_RS09205	COG0535	radical SAM domain protein
NYR47_RS09210	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NYR47_RS09230	COG1914	H( )-stimulated, divalent metal cation uptake system
NYR47_RS09245	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NYR47_RS09255	COG0531	amino acid
NYR47_RS09280	COG1266	CAAX protease self-immunity
NYR47_RS09285	COG1309	transcriptional regulator
NYR47_RS09290	COG2390	Transcriptional regulator
NYR47_RS09300	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NYR47_RS09305	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
NYR47_RS09310	COG0295	cytidine deaminase activity
NYR47_RS09340	COG0583	DNA-binding transcription factor activity
NYR47_RS09355	COG0006	proline dipeptidase activity
NYR47_RS09360	COG2132	Multicopper oxidase
NYR47_RS09405	COG1760	l-serine dehydratase
NYR47_RS09410	COG1760	l-serine dehydratase
NYR47_RS09415	COG0814	amino acid
NYR47_RS09445	COG1073	alpha beta
NYR47_RS09475	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NYR47_RS09485	COG0583	DNA-binding transcription factor activity
NYR47_RS09505	COG1114	Component of the transport system for branched-chain amino acids
NYR47_RS09515	COG1276	copper resistance
NYR47_RS09515	COG2372	response to copper ion
NYR47_RS09520	COG4549	nuclear export factor GLE1
NYR47_RS09525	COG0697	spore germination
NYR47_RS09530	COG0583	DNA-binding transcription factor activity
NYR47_RS09535	COG1959	2 iron, 2 sulfur cluster binding
NYR47_RS09540	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
NYR47_RS09545	COG0778	Nitroreductase
NYR47_RS09560	COG0628	permease
NYR47_RS09575	COG1231	oxidoreductase activity
NYR47_RS09580	COG0523	cobalamin synthesis protein
NYR47_RS09590	COG0411	ABC transporter
NYR47_RS09600	COG0559	Belongs to the binding-protein-dependent transport system permease family
NYR47_RS09635	COG0346	lactoylglutathione lyase activity
NYR47_RS09645	COG1271	oxidase subunit
NYR47_RS09650	COG1294	oxidase, subunit
NYR47_RS09655	COG4988	ABC transporter
NYR47_RS09660	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
NYR47_RS09665	COG0463	Glycosyl transferase, family 2
NYR47_RS09685	COG1686	Belongs to the peptidase S11 family
NYR47_RS09700	COG1388	LysM domain
NYR47_RS09700	COG0791	NLP P60 protein
NYR47_RS09710	COG1132	(ABC) transporter
NYR47_RS09715	COG0745	RESPONSE REGULATOR receiver
NYR47_RS09720	COG5002	protein histidine kinase activity
NYR47_RS09725	COG0300	oxidoreductase activity
NYR47_RS09730	COG4122	O-methyltransferase activity
NYR47_RS09745	COG5658	integral membrane protein
NYR47_RS09760	COG0460	homoserine dehydrogenase
NYR47_RS09770	COG0083	homoserine kinase activity
NYR47_RS09785	COG1316	TRANSCRIPTIONal
NYR47_RS09795	COG0745	RESPONSE REGULATOR receiver
NYR47_RS09800	COG5002	protein histidine kinase activity
NYR47_RS09815	COG1285	pathogenesis
NYR47_RS09820	COG1247	-acetyltransferase
NYR47_RS09840	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NYR47_RS09850	COG1082	Xylose isomerase domain protein TIM barrel
NYR47_RS09860	COG2814	Major facilitator Superfamily
NYR47_RS09865	COG1279	arginine transmembrane transporter activity
NYR47_RS09870	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NYR47_RS09880	COG1752	Esterase of the alpha-beta hydrolase superfamily
NYR47_RS09915	COG0577	efflux transmembrane transporter activity
NYR47_RS09920	COG2002	toxin-antitoxin pair type II binding
NYR47_RS09925	COG1404	Belongs to the peptidase S8 family
NYR47_RS09930	COG0640	Transcriptional regulator
NYR47_RS09975	COG3949	Membrane
NYR47_RS09980	COG0783	Belongs to the Dps family
NYR47_RS09995	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NYR47_RS10005	COG1231	oxidoreductase activity
NYR47_RS10010	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NYR47_RS10015	COG4989	oxidoreductase activity
NYR47_RS10020	COG0523	cobalamin synthesis protein
NYR47_RS10030	COG0803	Belongs to the bacterial solute-binding protein 9 family
NYR47_RS10040	COG0702	epimerase
NYR47_RS10050	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
NYR47_RS10060	COG4166	transmembrane transport
NYR47_RS10065	COG0346	lactoylglutathione lyase activity
NYR47_RS10075	COG0406	alpha-ribazole phosphatase activity
NYR47_RS10085	COG5337	Spore coat protein CotH
NYR47_RS10090	COG1051	belongs to the nudix hydrolase family
NYR47_RS10095	COG0586	Pfam SNARE associated Golgi protein
NYR47_RS10100	COG2244	polysaccharide biosynthetic process
NYR47_RS10110	COG0701	Predicted permease
NYR47_RS10115	COG3689	TIGRFAM TIGR03943 family protein
NYR47_RS10120	COG1607	acyl-coa hydrolase
NYR47_RS10130	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NYR47_RS10145	COG0702	epimerase
NYR47_RS10150	COG2839	Protein conserved in bacteria
NYR47_RS10155	COG1253	flavin adenine dinucleotide binding
NYR47_RS10170	COG1114	Component of the transport system for branched-chain amino acids
NYR47_RS10175	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NYR47_RS10195	COG0860	N-Acetylmuramoyl-L-alanine amidase
NYR47_RS10205	COG1876	peptidase activity
NYR47_RS10215	COG0154	amidase activity
NYR47_RS10220	COG2211	Major facilitator Superfamily
NYR47_RS10235	COG0860	N-Acetylmuramoyl-L-alanine amidase
NYR47_RS10245	COG0561	phosphatase activity
NYR47_RS10250	COG1846	Transcriptional regulator
NYR47_RS10255	COG2814	Major facilitator Superfamily
NYR47_RS10265	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NYR47_RS10280	COG1819	glycosyl
NYR47_RS10285	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NYR47_RS10290	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NYR47_RS10315	COG0456	acetyltransferase
NYR47_RS10405	COG3874	Sporulation protein YtfJ
NYR47_RS10430	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
NYR47_RS10450	COG0346	lactoylglutathione lyase activity
NYR47_RS10460	COG0604	alcohol dehydrogenase
NYR47_RS10485	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NYR47_RS10485	COG0426	domain, Protein
NYR47_RS10495	COG0386	Belongs to the glutathione peroxidase family
NYR47_RS10500	COG1305	Transglutaminase-like
NYR47_RS10505	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
NYR47_RS10510	COG0714	Associated with various cellular activities
NYR47_RS10525	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
NYR47_RS10530	COG1140	nitrate reductase beta subunit
NYR47_RS10535	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
NYR47_RS10540	COG2181	nitrate reductase activity
NYR47_RS10545	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NYR47_RS10550	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
NYR47_RS10555	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NYR47_RS10560	COG0303	'Molybdopterin
NYR47_RS10565	COG0314	molybdopterin synthase activity
NYR47_RS10575	COG2223	nitrite transmembrane transporter activity
NYR47_RS10585	COG1648	precorrin-2 dehydrogenase activity
NYR47_RS10595	COG1587	Uroporphyrinogen-III synthase
NYR47_RS10595	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NYR47_RS10600	COG2146	nitrite reductase [NAD(P)H] activity
NYR47_RS10605	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NYR47_RS10610	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
NYR47_RS10640	COG2359	stage V sporulation protein S
NYR47_RS10650	COG2856	Zn peptidase
NYR47_RS10660	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NYR47_RS10675	COG1396	sequence-specific DNA binding
NYR47_RS10755	COG0582	viral genome integration into host DNA
NYR47_RS10765	COG1278	Cold shock
NYR47_RS10785	COG0582	viral genome integration into host DNA
NYR47_RS10795	COG5484	DNA packaging
NYR47_RS10800	COG1783	phage Terminase large subunit
NYR47_RS10815	COG0338	D12 class N6 adenine-specific DNA methyltransferase
NYR47_RS10820	COG4653	Phage capsid family
NYR47_RS10955	COG0457	Tetratricopeptide repeat
NYR47_RS10970	COG1418	mRNA catabolic process
NYR47_RS10975	COG0488	(ABC) transporter
NYR47_RS10990	COG0629	single-stranded DNA binding
NYR47_RS11000	COG1413	lyase activity
NYR47_RS11015	COG2136	Putative SAM-dependent methyltransferase
NYR47_RS11015	COG2521	methyltransferase
NYR47_RS11020	COG0018	arginyl-trna synthetase
NYR47_RS11060	COG0017	Asparaginyl-tRNA synthetase
NYR47_RS11065	COG0733	neurotransmitter:sodium symporter activity
NYR47_RS11090	COG2610	gluconate transmembrane transporter activity
NYR47_RS11095	COG1454	alcohol dehydrogenase
NYR47_RS11100	COG1794	racemase activity, acting on amino acids and derivatives
NYR47_RS11110	COG0456	acetyltransferase
NYR47_RS11115	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
NYR47_RS11125	COG1131	(ABC) transporter
NYR47_RS11130	COG4473	ABC transporter
NYR47_RS11140	COG0546	phosphoglycolate phosphatase activity
NYR47_RS11155	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
NYR47_RS11170	COG0768	penicillin binding
NYR47_RS11180	COG0204	Acyl-transferase
NYR47_RS11185	COG1272	protein, Hemolysin III
NYR47_RS11195	COG0805	protein transport
NYR47_RS11205	COG1307	EDD domain protein, DegV family
NYR47_RS11210	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
NYR47_RS11215	COG1999	signal sequence binding
NYR47_RS11220	COG0071	Belongs to the small heat shock protein (HSP20) family
NYR47_RS11225	COG0367	asparagine synthase
NYR47_RS11240	COG0860	N-Acetylmuramoyl-L-alanine amidase
NYR47_RS11245	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NYR47_RS11250	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
NYR47_RS11265	COG1335	isochorismatase
NYR47_RS11270	COG1051	belongs to the nudix hydrolase family
NYR47_RS11275	COG0668	transmembrane transport
NYR47_RS11280	COG4585	Histidine kinase
NYR47_RS11280	COG2203	Gaf domain
NYR47_RS11285	COG2197	response regulator
NYR47_RS11290	COG1737	Transcriptional regulator
NYR47_RS11295	COG1064	alcohol dehydrogenase
NYR47_RS11355	COG1125	glycine betaine transport
NYR47_RS11355	COG0517	IMP dehydrogenase activity
NYR47_RS11360	COG1174	glycine betaine transport
NYR47_RS11395	COG1253	flavin adenine dinucleotide binding
NYR47_RS11400	COG1012	belongs to the aldehyde dehydrogenase family
NYR47_RS11405	COG5506	Protein of unknown function (DUF1694)
NYR47_RS11420	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NYR47_RS11425	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
NYR47_RS11430	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
NYR47_RS11435	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NYR47_RS11440	COG0456	acetyltransferase
NYR47_RS11445	COG3829	transcription factor binding
NYR47_RS11450	COG1509	lysine 2,3-aminomutase activity
NYR47_RS11485	COG0515	serine threonine protein kinase
NYR47_RS11485	COG3064	Membrane
NYR47_RS11485	COG4991	sh3 domain protein
NYR47_RS11495	COG0671	phosphoesterase, PA-phosphatase related
NYR47_RS11500	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NYR47_RS11505	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NYR47_RS11565	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NYR47_RS11590	COG1028	Short-chain dehydrogenase reductase Sdr
NYR47_RS11610	COG4499	WXG100 protein secretion system (Wss), protein YukC
NYR47_RS11610	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NYR47_RS11620	COG2814	Major facilitator Superfamily
NYR47_RS11630	COG0372	Belongs to the citrate synthase family
NYR47_RS11635	COG2079	MmgE PrpD family protein
NYR47_RS11640	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
NYR47_RS11645	COG1960	acyl-CoA dehydrogenase activity
NYR47_RS11650	COG2084	Dehydrogenase
NYR47_RS11660	COG1280	lysine exporter protein (LysE YggA)
NYR47_RS11665	COG1024	Enoyl-CoA hydratase
NYR47_RS11680	COG0420	3'-5' exonuclease activity
NYR47_RS11705	COG2223	nitrite transmembrane transporter activity
NYR47_RS11710	COG1028	Short-chain dehydrogenase reductase Sdr
NYR47_RS11720	COG1021	2,3-dihydroxybenzoate-AMP ligase
NYR47_RS11725	COG1535	isochorismatase
NYR47_RS11725	COG3433	isochorismatase activity
NYR47_RS11730	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NYR47_RS11735	COG3251	PFAM MbtH domain protein
NYR47_RS11740	COG2814	Major facilitator Superfamily
NYR47_RS11755	COG0776	regulation of translation
NYR47_RS11765	COG2318	DinB family
NYR47_RS11790	COG1115	amino acid carrier protein
NYR47_RS11805	COG2329	Antibiotic biosynthesis monooxygenase
NYR47_RS11810	COG1187	pseudouridine synthase activity
NYR47_RS11815	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NYR47_RS11820	COG1136	(ABC) transporter
NYR47_RS11830	COG0596	Alpha beta hydrolase
NYR47_RS11845	COG0028	Belongs to the TPP enzyme family
NYR47_RS11880	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NYR47_RS11890	COG2207	Transcriptional regulator
NYR47_RS11915	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
NYR47_RS11915	COG2755	lipolytic protein G-D-S-L family
NYR47_RS11925	COG5002	protein histidine kinase activity
NYR47_RS11935	COG0745	RESPONSE REGULATOR receiver
NYR47_RS11940	COG5002	protein histidine kinase activity
NYR47_RS11955	COG1846	Transcriptional regulator
NYR47_RS11965	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NYR47_RS11970	COG1309	transcriptional regulator
NYR47_RS11995	COG1247	-acetyltransferase
NYR47_RS12020	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
NYR47_RS12030	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NYR47_RS12060	COG0583	DNA-binding transcription factor activity
NYR47_RS12065	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NYR47_RS12075	COG0583	DNA-binding transcription factor activity
NYR47_RS12080	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NYR47_RS12085	COG2258	MOSC domain
NYR47_RS12100	COG1132	(ABC) transporter
NYR47_RS12105	COG1132	(ABC) transporter
NYR47_RS12125	COG1396	sequence-specific DNA binding
NYR47_RS12165	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
NYR47_RS12170	COG1595	DNA-templated transcription, initiation
NYR47_RS12180	COG4122	O-methyltransferase activity
NYR47_RS12195	COG1649	PFAM Uncharacterised BCR, COG1649
NYR47_RS12215	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
NYR47_RS12220	COG2971	BadF BadG BcrA BcrD
NYR47_RS12255	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NYR47_RS12275	COG1309	transcriptional regulator
NYR47_RS12300	COG3615	Tellurite resistance protein tehB
NYR47_RS12300	COG0500	methyltransferase
NYR47_RS12310	COG2226	methyltransferase
NYR47_RS12315	COG3961	Belongs to the TPP enzyme family
NYR47_RS12350	COG2195	Cleaves the N-terminal amino acid of tripeptides
NYR47_RS12380	COG2002	toxin-antitoxin pair type II binding
NYR47_RS12390	COG0730	response to heat
NYR47_RS12395	COG0110	maltose O-acetyltransferase activity
NYR47_RS12400	COG1686	Belongs to the peptidase S11 family
NYR47_RS12430	COG1115	amino acid carrier protein
NYR47_RS12435	COG2066	Belongs to the glutaminase family
NYR47_RS12440	COG4191	Histidine kinase
NYR47_RS12445	COG0784	Response regulator, receiver
NYR47_RS12450	COG0697	spore germination
NYR47_RS12455	COG0531	amino acid
NYR47_RS12465	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NYR47_RS12470	COG0531	amino acid
NYR47_RS12475	COG0322	excinuclease ABC activity
NYR47_RS12485	COG0778	Nitroreductase
NYR47_RS12490	COG1396	sequence-specific DNA binding
NYR47_RS12495	COG0252	asparaginase activity
NYR47_RS12500	COG1027	Aspartate ammonia-lyase
NYR47_RS12510	COG0768	penicillin binding
NYR47_RS12515	COG1595	DNA-templated transcription, initiation
NYR47_RS12530	COG0768	penicillin binding
NYR47_RS12540	COG1408	metallophosphoesterase
NYR47_RS12550	COG1131	(ABC) transporter
NYR47_RS12560	COG1309	transcriptional regulator
NYR47_RS12575	COG1960	acyl-CoA dehydrogenase activity
NYR47_RS12580	COG0439	Biotin carboxylase
NYR47_RS12585	COG0511	ligase activity, forming carbon-carbon bonds
NYR47_RS12590	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NYR47_RS12595	COG1024	Enoyl-CoA hydratase
NYR47_RS12600	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
NYR47_RS12605	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NYR47_RS12670	COG2318	DinB family
NYR47_RS12675	COG1686	Belongs to the peptidase S11 family
NYR47_RS12700	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NYR47_RS12720	COG3227	Zinc metalloprotease (Elastase)
NYR47_RS12730	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NYR47_RS12760	COG1733	regulation of RNA biosynthetic process
NYR47_RS12765	COG2226	methyltransferase
NYR47_RS12775	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NYR47_RS12785	COG1942	4-Oxalocrotonate Tautomerase
NYR47_RS12790	COG0583	DNA-binding transcription factor activity
NYR47_RS12800	COG1131	(ABC) transporter
NYR47_RS12810	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
NYR47_RS12830	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NYR47_RS12845	COG2368	4-hydroxyphenylacetate
NYR47_RS12875	COG2323	membrane
NYR47_RS12885	COG0693	protein deglycase activity
NYR47_RS12895	COG3386	PFAM SMP-30 Gluconolaconase
NYR47_RS12905	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
NYR47_RS12910	COG3773	Cell wall hydrolase
NYR47_RS12920	COG0745	RESPONSE REGULATOR receiver
NYR47_RS12925	COG2205	protein histidine kinase activity
NYR47_RS12935	COG0583	DNA-binding transcription factor activity
NYR47_RS12945	COG0488	(ABC) transporter
NYR47_RS12955	COG1136	(ABC) transporter
NYR47_RS12960	COG0577	efflux transmembrane transporter activity
NYR47_RS12985	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NYR47_RS12995	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
NYR47_RS13045	COG0582	viral genome integration into host DNA
NYR47_RS13065	COG1396	sequence-specific DNA binding
NYR47_RS13095	COG1484	DNA-dependent DNA replication
NYR47_RS13160	COG0582	viral genome integration into host DNA
NYR47_RS13175	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NYR47_RS13325	COG5632	N-Acetylmuramoyl-L-alanine amidase
NYR47_RS13375	COG2124	cytochrome p450
NYR47_RS13410	COG0561	phosphatase activity
NYR47_RS13415	COG5002	protein histidine kinase activity
NYR47_RS13420	COG0768	penicillin binding
NYR47_RS13430	COG1819	glycosyl
NYR47_RS13435	COG1794	racemase activity, acting on amino acids and derivatives
NYR47_RS13465	COG2205	protein histidine kinase activity
NYR47_RS13475	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NYR47_RS13485	COG0745	RESPONSE REGULATOR receiver
NYR47_RS13490	COG5002	protein histidine kinase activity
NYR47_RS13495	COG0604	alcohol dehydrogenase
NYR47_RS13500	COG0671	phosphoesterase, PA-phosphatase related
NYR47_RS13505	COG0768	penicillin binding
NYR47_RS13565	COG2814	Major facilitator Superfamily
NYR47_RS13580	COG0584	glycerophosphoryl diester phosphodiesterase
NYR47_RS13600	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NYR47_RS13605	COG0697	spore germination
NYR47_RS13645	COG2223	nitrite transmembrane transporter activity
NYR47_RS13655	COG2816	NAD+ diphosphatase activity
NYR47_RS13660	COG0592	DNA-directed DNA polymerase activity
NYR47_RS13685	COG3878	Protein conserved in bacteria
NYR47_RS13710	COG4667	esterase of the alpha-beta hydrolase superfamily
NYR47_RS13750	COG0322	excinuclease ABC activity
NYR47_RS13780	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NYR47_RS13805	COG1011	Hydrolase
NYR47_RS13810	COG0745	RESPONSE REGULATOR receiver
NYR47_RS13815	COG5002	protein histidine kinase activity
NYR47_RS13845	COG0577	efflux transmembrane transporter activity
NYR47_RS13855	COG1073	alpha beta
NYR47_RS13860	COG1523	belongs to the glycosyl hydrolase 13 family
NYR47_RS13865	COG3227	Zinc metalloprotease (Elastase)
NYR47_RS13870	COG0737	Belongs to the 5'-nucleotidase family
NYR47_RS13880	COG0201	protein transport
NYR47_RS13885	COG0697	spore germination
NYR47_RS13890	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NYR47_RS13925	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NYR47_RS13940	COG2959	enzyme of heme biosynthesis
NYR47_RS13980	COG1309	transcriptional regulator
NYR47_RS13990	COG3284	Transcriptional regulator
NYR47_RS14005	COG1349	DNA-binding transcription factor activity
NYR47_RS14025	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NYR47_RS14030	COG0508	dehydrogenase complex catalyzes the overall conversion of
NYR47_RS14035	COG0022	dehydrogenase e1 component
NYR47_RS14040	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
NYR47_RS14050	COG1028	Short-chain dehydrogenase reductase Sdr
NYR47_RS14080	COG4176	ABC-type proline glycine betaine transport system permease component
NYR47_RS14085	COG4175	Glycine betaine
NYR47_RS14085	COG0517	IMP dehydrogenase activity
NYR47_RS14115	COG2153	protein acetylation
NYR47_RS14130	COG3397	chitin binding
NYR47_RS14140	COG1819	glycosyl
NYR47_RS14160	COG2205	protein histidine kinase activity
NYR47_RS14165	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
NYR47_RS14170	COG2315	Protein conserved in bacteria
NYR47_RS14220	COG3973	AAA domain
NYR47_RS14225	COG2105	PFAM AIG2 family protein
NYR47_RS14230	COG0514	ATP-dependent DNA helicase (RecQ)
NYR47_RS14260	COG4637	Psort location Cytoplasmic, score
NYR47_RS14275	COG3397	chitin binding
NYR47_RS14280	COG2318	DinB family
NYR47_RS14295	COG1162	GTPase activity
NYR47_RS14300	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NYR47_RS14305	COG1115	amino acid carrier protein
NYR47_RS14310	COG1012	belongs to the aldehyde dehydrogenase family
NYR47_RS14315	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NYR47_RS14320	COG3938	Belongs to the proline racemase family
NYR47_RS14325	COG3938	Belongs to the proline racemase family
NYR47_RS14330	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NYR47_RS14335	COG2204	response regulator
NYR47_RS14380	COG1078	dGTPase activity
NYR47_RS14385	COG0586	Pfam SNARE associated Golgi protein
NYR47_RS14395	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
NYR47_RS14400	COG4166	transmembrane transport
NYR47_RS14410	COG4948	Mandelate Racemase Muconate Lactonizing
NYR47_RS14455	COG2936	dipeptidyl-peptidase activity
NYR47_RS14460	COG5002	protein histidine kinase activity
NYR47_RS14460	COG3850	Histidine kinase
NYR47_RS14490	COG1164	Oligoendopeptidase f
NYR47_RS14495	COG0456	acetyltransferase
NYR47_RS14500	COG1307	EDD domain protein, DegV family
NYR47_RS14540	COG2814	Major facilitator Superfamily
NYR47_RS14550	COG1664	Polymer-forming cytoskeletal
NYR47_RS14555	COG0789	Transcriptional regulator
NYR47_RS14560	COG4533	DNA binding
NYR47_RS14565	COG0477	Major facilitator Superfamily
NYR47_RS14565	COG2814	Major facilitator Superfamily
NYR47_RS14590	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NYR47_RS14595	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
NYR47_RS14600	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NYR47_RS14605	COG0438	transferase activity, transferring glycosyl groups
NYR47_RS14620	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
NYR47_RS14625	COG0438	transferase activity, transferring glycosyl groups
NYR47_RS14630	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
NYR47_RS14650	COG2261	transglycosylase associated protein
NYR47_RS14665	COG2226	methyltransferase
NYR47_RS14700	COG0436	Aminotransferase
NYR47_RS14705	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
NYR47_RS14715	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
NYR47_RS14730	COG1131	(ABC) transporter
NYR47_RS14785	COG0628	permease
NYR47_RS14800	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NYR47_RS14805	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NYR47_RS14810	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NYR47_RS14840	COG2746	aminoglycoside 3-N-acetyltransferase activity
NYR47_RS14875	COG0697	spore germination
NYR47_RS14915	COG0346	lactoylglutathione lyase activity
NYR47_RS14920	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NYR47_RS14945	COG2814	Major facilitator Superfamily
NYR47_RS14950	COG0861	Integral membrane protein TerC family
NYR47_RS14955	COG1368	sulfuric ester hydrolase activity
NYR47_RS14960	COG0488	(ABC) transporter
NYR47_RS14965	COG1033	growth of symbiont in host cell
NYR47_RS14965	COG2409	Drug exporters of the RND superfamily
NYR47_RS14970	COG1309	transcriptional regulator
NYR47_RS14985	COG0287	Prephenate dehydrogenase
NYR47_RS15000	COG1605	Chorismate mutase
NYR47_RS15000	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
NYR47_RS15040	COG3584	3D domain protein
NYR47_RS15040	COG1388	LysM domain
NYR47_RS15050	COG0346	lactoylglutathione lyase activity
NYR47_RS15055	COG0519	Catalyzes the synthesis of GMP from XMP
NYR47_RS15060	COG0431	NADPH-dependent FMN reductase
NYR47_RS15085	COG1172	Belongs to the binding-protein-dependent transport system permease family
NYR47_RS15090	COG1172	Belongs to the binding-protein-dependent transport system permease family
NYR47_RS15100	COG2390	Transcriptional regulator
NYR47_RS15135	COG2329	Antibiotic biosynthesis monooxygenase
NYR47_RS15155	COG1472	Belongs to the glycosyl hydrolase 3 family
NYR47_RS15160	COG2207	Transcriptional regulator
NYR47_RS15165	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NYR47_RS15170	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NYR47_RS15175	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
NYR47_RS15180	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NYR47_RS15185	COG4187	Peptidase family M20/M25/M40
NYR47_RS15190	COG1414	Transcriptional regulator
NYR47_RS15195	COG0833	amino acid
NYR47_RS15205	COG3239	Fatty acid desaturase
NYR47_RS15210	COG2720	vancomycin resistance protein
NYR47_RS15215	COG1785	Belongs to the alkaline phosphatase family
NYR47_RS15225	COG3655	Transcriptional regulator
NYR47_RS15250	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NYR47_RS15255	COG0346	lactoylglutathione lyase activity
NYR47_RS15275	COG0714	Associated with various cellular activities
NYR47_RS15340	COG0714	Associated with various cellular activities
NYR47_RS15390	COG0778	Nitroreductase
NYR47_RS15395	COG1846	Transcriptional regulator
NYR47_RS15450	COG0456	acetyltransferase
NYR47_RS15465	COG0697	spore germination
NYR47_RS15470	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NYR47_RS15510	COG0730	response to heat
NYR47_RS15520	COG0833	amino acid
NYR47_RS15530	COG4335	DNA alkylation repair
NYR47_RS15560	COG0768	penicillin binding
NYR47_RS15590	COG1984	allophanate hydrolase subunit 2
NYR47_RS15595	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
NYR47_RS15600	COG1414	Transcriptional regulator
NYR47_RS15615	COG3142	Participates in the control of copper homeostasis
NYR47_RS15630	COG0640	Transcriptional regulator
NYR47_RS15640	COG1960	acyl-CoA dehydrogenase activity
NYR47_RS15655	COG3314	Sporulation integral membrane protein YlbJ
NYR47_RS15685	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
NYR47_RS15705	COG3848	Pyruvate phosphate dikinase
NYR47_RS15705	COG0574	Belongs to the PEP-utilizing enzyme family
NYR47_RS15715	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NYR47_RS15740	COG1063	alcohol dehydrogenase
NYR47_RS15745	COG3546	catalase activity
NYR47_RS15750	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NYR47_RS15775	COG0737	Belongs to the 5'-nucleotidase family
NYR47_RS15780	COG2267	carboxylic ester hydrolase activity
NYR47_RS15785	COG1335	isochorismatase
NYR47_RS15810	COG0583	DNA-binding transcription factor activity
NYR47_RS15835	COG0598	Magnesium transport protein CorA
NYR47_RS15870	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NYR47_RS15900	COG0415	Belongs to the DNA photolyase family
NYR47_RS15905	COG0288	reversible hydration of carbon dioxide
NYR47_RS15915	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
NYR47_RS15920	COG5609	conserved protein (DUF2294)
NYR47_RS15935	COG1575	Belongs to the MenA family. Type 1 subfamily
NYR47_RS15955	COG2267	carboxylic ester hydrolase activity
NYR47_RS15960	COG4641	Protein conserved in bacteria
NYR47_RS15980	COG0798	PFAM Bile acid sodium symporter
NYR47_RS15985	COG0346	lactoylglutathione lyase activity
NYR47_RS15990	COG0640	Transcriptional regulator
NYR47_RS16010	COG0109	protoheme IX farnesyltransferase activity
NYR47_RS16025	COG1309	transcriptional regulator
NYR47_RS16030	COG2186	Transcriptional regulator
NYR47_RS16045	COG0814	amino acid
NYR47_RS16050	COG0697	spore germination
NYR47_RS16055	COG2814	Major facilitator Superfamily
NYR47_RS16060	COG1309	transcriptional regulator
NYR47_RS16065	COG1028	Short-chain dehydrogenase reductase Sdr
NYR47_RS16070	COG1522	sequence-specific DNA binding
NYR47_RS16085	COG0346	lactoylglutathione lyase activity
NYR47_RS16165	COG0384	phenazine biosynthesis protein PhzF
NYR47_RS16170	COG2814	Major facilitator Superfamily
NYR47_RS16185	COG2515	1-aminocyclopropane-1-carboxylate deaminase
NYR47_RS16205	COG1476	TRANSCRIPTIONal
NYR47_RS16225	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NYR47_RS16235	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NYR47_RS16255	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
NYR47_RS16275	COG0577	efflux transmembrane transporter activity
NYR47_RS16285	COG3850	Histidine kinase
NYR47_RS16285	COG5002	protein histidine kinase activity
NYR47_RS16295	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NYR47_RS16305	COG1619	proteins homologs of microcin C7 resistance protein MccF
NYR47_RS16325	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NYR47_RS16410	COG5444	nuclease activity
NYR47_RS16445	COG5444	nuclease activity
NYR47_RS16470	COG1876	peptidase activity
NYR47_RS16475	COG2843	Capsule synthesis protein
NYR47_RS16485	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NYR47_RS16490	COG1012	belongs to the aldehyde dehydrogenase family
NYR47_RS16500	COG0534	Mate efflux family protein
NYR47_RS16505	COG1012	belongs to the aldehyde dehydrogenase family
NYR47_RS16510	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NYR47_RS16525	COG0477	Major facilitator Superfamily
NYR47_RS16540	COG1846	Transcriptional regulator
NYR47_RS16545	COG2814	Major facilitator Superfamily
NYR47_RS16570	COG2031	fatty acid transporter
NYR47_RS16580	COG2249	NAD(P)H dehydrogenase (quinone) activity
NYR47_RS16635	COG1288	antiporter activity
NYR47_RS16640	COG2356	endonuclease I
NYR47_RS16650	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NYR47_RS16655	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NYR47_RS16675	COG1733	regulation of RNA biosynthetic process
NYR47_RS16680	COG0778	Nitroreductase
NYR47_RS16715	COG1028	Short-chain dehydrogenase reductase Sdr
NYR47_RS16725	COG1131	(ABC) transporter
NYR47_RS16750	COG1011	Hydrolase
NYR47_RS16760	COG2365	Tyrosine phosphatase family
NYR47_RS16805	COG0346	lactoylglutathione lyase activity
NYR47_RS16810	COG1940	carbohydrate kinase activity
NYR47_RS16815	COG0738	Major facilitator superfamily
NYR47_RS16820	COG0110	maltose O-acetyltransferase activity
NYR47_RS16835	COG0628	permease
NYR47_RS16865	COG0477	Major facilitator Superfamily
NYR47_RS16895	COG1253	flavin adenine dinucleotide binding
NYR47_RS16900	COG0789	Transcriptional regulator
NYR47_RS16910	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
NYR47_RS16935	COG0697	spore germination
NYR47_RS16940	COG1357	PFAM Pentapeptide repeats (8 copies)
NYR47_RS16945	COG3813	Protein conserved in bacteria
NYR47_RS16950	COG2706	6-phosphogluconolactonase activity
NYR47_RS16955	COG1070	Carbohydrate kinase
NYR47_RS16970	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
NYR47_RS16980	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NYR47_RS16990	COG0604	alcohol dehydrogenase
NYR47_RS16995	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NYR47_RS17000	COG0789	Transcriptional regulator
NYR47_RS17005	COG4221	oxidoreductase activity
NYR47_RS17010	COG0604	alcohol dehydrogenase
NYR47_RS17010	COG3321	synthase
NYR47_RS17015	COG1028	Short-chain dehydrogenase reductase Sdr
NYR47_RS17050	COG2309	aminopeptidase activity
NYR47_RS17060	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NYR47_RS17060	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NYR47_RS17065	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NYR47_RS17065	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NYR47_RS17070	COG1733	regulation of RNA biosynthetic process
NYR47_RS17085	COG0656	L-ascorbic acid biosynthetic process
NYR47_RS17090	COG2814	Major facilitator Superfamily
NYR47_RS17105	COG0346	lactoylglutathione lyase activity
NYR47_RS17110	COG2824	Alkylphosphonate utilization operon protein PhnA
NYR47_RS17115	COG0659	secondary active sulfate transmembrane transporter activity
NYR47_RS17130	COG0814	amino acid
NYR47_RS17135	COG3655	Transcriptional regulator
NYR47_RS17165	COG1393	Belongs to the ArsC family
NYR47_RS17170	COG1733	regulation of RNA biosynthetic process
NYR47_RS17175	COG2188	Transcriptional regulator
NYR47_RS17180	COG0673	inositol 2-dehydrogenase activity
NYR47_RS17185	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
NYR47_RS17190	COG1733	regulation of RNA biosynthetic process
NYR47_RS17195	COG1733	regulation of RNA biosynthetic process
NYR47_RS17215	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NYR47_RS17245	COG0318	PFAM AMP-dependent synthetase and ligase
NYR47_RS17250	COG2249	NAD(P)H dehydrogenase (quinone) activity
NYR47_RS17255	COG1733	regulation of RNA biosynthetic process
NYR47_RS17270	COG0640	Transcriptional regulator
NYR47_RS17295	COG1191	sigma factor activity
NYR47_RS17305	COG0076	glutamate decarboxylase activity
NYR47_RS17320	COG2207	Transcriptional regulator
NYR47_RS17340	COG1280	lysine exporter protein (LysE YggA)
NYR47_RS17360	COG3152	Membrane
NYR47_RS17400	COG1151	hydroxylamine reductase activity
NYR47_RS17430	COG2072	flavoprotein involved in K transport
NYR47_RS17465	COG0604	alcohol dehydrogenase
NYR47_RS17470	COG1113	amino acid transport
NYR47_RS17475	COG2814	Major facilitator Superfamily
NYR47_RS17525	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
NYR47_RS17530	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
NYR47_RS17545	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NYR47_RS17550	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NYR47_RS17555	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NYR47_RS17560	COG3739	integral membrane protein
NYR47_RS17590	COG0583	DNA-binding transcription factor activity
NYR47_RS17620	COG1193	negative regulation of DNA recombination
NYR47_RS17630	COG2162	N-hydroxyarylamine O-acetyltransferase activity
NYR47_RS17635	COG1164	Oligoendopeptidase f
NYR47_RS17660	COG3781	membrane
NYR47_RS17675	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
NYR47_RS17690	COG0583	DNA-binding transcription factor activity
NYR47_RS17705	COG0584	glycerophosphoryl diester phosphodiesterase
NYR47_RS17715	COG0640	Transcriptional regulator
NYR47_RS17720	COG0604	alcohol dehydrogenase
NYR47_RS17730	COG0457	Tetratricopeptide repeat
NYR47_RS17750	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NYR47_RS17760	COG0277	FAD linked oxidase domain protein
NYR47_RS17805	COG3852	Histidine kinase
NYR47_RS17815	COG1285	pathogenesis
NYR47_RS17825	COG2514	catechol 2,3-dioxygenase activity
NYR47_RS17830	COG2720	vancomycin resistance protein
NYR47_RS17865	COG0716	FMN binding
NYR47_RS17895	COG1028	Short-chain dehydrogenase reductase Sdr
NYR47_RS17905	COG0165	Argininosuccinate lyase
NYR47_RS17920	COG4145	pantothenate transmembrane transporter activity
NYR47_RS17930	COG1012	belongs to the aldehyde dehydrogenase family
NYR47_RS17935	COG1028	Short-chain dehydrogenase reductase Sdr
NYR47_RS17945	COG1657	PFAM Prenyltransferase squalene oxidase
NYR47_RS17950	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
NYR47_RS17955	COG2962	Rard protein
NYR47_RS17960	COG3326	Membrane
NYR47_RS17975	COG0489	protein tyrosine kinase activity
NYR47_RS17985	COG0314	molybdopterin synthase activity
NYR47_RS17990	COG0303	'Molybdopterin
NYR47_RS17995	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NYR47_RS18000	COG2116	formate transmembrane transporter activity
NYR47_RS18010	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
NYR47_RS18015	COG5609	conserved protein (DUF2294)
NYR47_RS18020	COG2427	Protein of unknown function (DUF1641)
NYR47_RS18025	COG3383	formate dehydrogenase (NAD+) activity
NYR47_RS18045	COG0531	amino acid
NYR47_RS18080	COG2226	methyltransferase
NYR47_RS18085	COG4166	transmembrane transport
NYR47_RS18090	COG4166	transmembrane transport
NYR47_RS18095	COG4166	transmembrane transport
NYR47_RS18105	COG1316	TRANSCRIPTIONal
NYR47_RS18115	COG1595	DNA-templated transcription, initiation
NYR47_RS18125	COG1131	(ABC) transporter
NYR47_RS18135	COG0673	inositol 2-dehydrogenase activity
NYR47_RS18140	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NYR47_RS18145	COG0187	DNA topoisomerase II activity
NYR47_RS18150	COG1832	CoA-binding protein
NYR47_RS18155	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NYR47_RS18160	COG0745	RESPONSE REGULATOR receiver
NYR47_RS18170	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
NYR47_RS18170	COG1328	CTP reductase activity
NYR47_RS18180	COG4841	protein insertion into membrane
NYR47_RS18185	COG0824	Thioesterase
NYR47_RS18210	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NYR47_RS18225	COG1132	(ABC) transporter
NYR47_RS18230	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
NYR47_RS18260	COG2211	Major facilitator Superfamily
NYR47_RS18270	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NYR47_RS18285	COG0183	Belongs to the thiolase family
NYR47_RS18290	COG0318	PFAM AMP-dependent synthetase and ligase
NYR47_RS18295	COG1268	BioY protein
NYR47_RS18300	COG0318	PFAM AMP-dependent synthetase and ligase
NYR47_RS18305	COG1396	sequence-specific DNA binding
NYR47_RS18325	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
NYR47_RS18345	COG0830	nickel cation binding
NYR47_RS18385	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NYR47_RS18395	COG5002	protein histidine kinase activity
NYR47_RS18400	COG0400	carboxylic ester hydrolase activity
NYR47_RS18405	COG0346	lactoylglutathione lyase activity
NYR47_RS18410	COG4846	Membrane protein involved in cytochrome C biogenesis
NYR47_RS18415	COG0069	glutamate synthase activity
NYR47_RS18420	COG1902	pentaerythritol trinitrate reductase activity
NYR47_RS18425	COG1329	Transcriptional regulator
NYR47_RS18430	COG0010	Belongs to the arginase family
NYR47_RS18480	COG4846	Membrane protein involved in cytochrome C biogenesis
NYR47_RS18485	COG0785	Cytochrome C biogenesis protein
NYR47_RS18495	COG1473	amidohydrolase
NYR47_RS18505	COG1131	(ABC) transporter
NYR47_RS18520	COG0583	DNA-binding transcription factor activity
NYR47_RS18530	COG1346	cytolysis
NYR47_RS18545	COG0730	response to heat
NYR47_RS18575	COG1132	(ABC) transporter
NYR47_RS18580	COG1132	(ABC) transporter
NYR47_RS18585	COG3763	UPF0154 protein
NYR47_RS18605	COG3639	organic phosphonate transmembrane transporter activity
NYR47_RS18620	COG0737	Belongs to the 5'-nucleotidase family
NYR47_RS18630	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
NYR47_RS18650	COG1695	Transcriptional regulator
NYR47_RS18655	COG1132	(ABC) transporter
NYR47_RS18685	COG0367	asparagine synthase
NYR47_RS18690	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
NYR47_RS18700	COG1181	Belongs to the D-alanine--D-alanine ligase family
NYR47_RS18705	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
NYR47_RS18710	COG3420	alginic acid biosynthetic process
NYR47_RS18710	COG5434	Belongs to the glycosyl hydrolase 28 family
NYR47_RS18735	COG0438	transferase activity, transferring glycosyl groups
NYR47_RS18745	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
NYR47_RS18745	COG0463	Glycosyl transferase, family 2
NYR47_RS18750	COG0438	transferase activity, transferring glycosyl groups
NYR47_RS18755	COG0438	transferase activity, transferring glycosyl groups
NYR47_RS18760	COG1086	Polysaccharide biosynthesis protein
NYR47_RS18765	COG0489	protein tyrosine kinase activity
NYR47_RS18785	COG0741	lytic transglycosylase activity
NYR47_RS18785	COG1196	nuclear chromosome segregation
NYR47_RS18785	COG0739	heme binding
NYR47_RS18820	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NYR47_RS18825	COG0174	glutamine synthetase
NYR47_RS18830	COG0789	Transcriptional regulator
NYR47_RS18835	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
NYR47_RS18840	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NYR47_RS18845	COG2860	membrane
NYR47_RS18855	COG0464	growth
NYR47_RS18890	COG3584	3D domain protein
NYR47_RS18890	COG1388	LysM domain
NYR47_RS18895	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NYR47_RS18895	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NYR47_RS18895	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NYR47_RS18900	COG1105	Belongs to the carbohydrate kinase PfkB family
NYR47_RS18905	COG1349	DNA-binding transcription factor activity
NYR47_RS18910	COG1979	alcohol dehydrogenase
NYR47_RS18915	COG2322	membrane
NYR47_RS18925	COG1113	amino acid transport
NYR47_RS18935	COG1473	amidohydrolase
NYR47_RS18940	COG1408	metallophosphoesterase
NYR47_RS18960	COG2217	Heavy metal translocating P-type atpase
NYR47_RS18965	COG2608	mercury ion transmembrane transporter activity
NYR47_RS18970	COG1937	Protein conserved in bacteria
NYR47_RS18980	COG2819	hydrolase of the alpha beta superfamily
NYR47_RS18985	COG1120	ATPase activity
NYR47_RS18990	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NYR47_RS18995	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NYR47_RS19000	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NYR47_RS19005	COG0708	Exodeoxyribonuclease III
NYR47_RS19010	COG2169	Transcriptional regulator
NYR47_RS19015	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
NYR47_RS19020	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
NYR47_RS19030	COG2364	Membrane
NYR47_RS19050	COG5001	Diguanylate cyclase
NYR47_RS19050	COG3300	MHYT domain
NYR47_RS19090	COG1346	cytolysis
NYR47_RS19100	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NYR47_RS19105	COG0596	Alpha beta hydrolase
NYR47_RS19105	COG0508	dehydrogenase complex catalyzes the overall conversion of
NYR47_RS19130	COG1404	Belongs to the peptidase S8 family
NYR47_RS19135	COG3773	Cell wall hydrolase
NYR47_RS19145	COG1368	sulfuric ester hydrolase activity
NYR47_RS19165	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NYR47_RS19180	COG4550	Control of competence regulator ComK, YlbF/YmcA
NYR47_RS19190	COG1013	pyruvate-flavodoxin oxidoreductase activity
NYR47_RS19195	COG0674	pyruvate-flavodoxin oxidoreductase activity
NYR47_RS19195	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
NYR47_RS19205	COG2359	stage V sporulation protein S
NYR47_RS19210	COG1692	metallophosphoesterase
NYR47_RS19240	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NYR47_RS19245	COG1426	Protein conserved in bacteria
NYR47_RS19260	COG0300	oxidoreductase activity
NYR47_RS19265	COG0612	Peptidase, M16
NYR47_RS19270	COG0612	Peptidase, M16
NYR47_RS19275	COG1079	Belongs to the binding-protein-dependent transport system permease family
NYR47_RS19280	COG4603	Belongs to the binding-protein-dependent transport system permease family
NYR47_RS19285	COG3845	ABC transporter
NYR47_RS19290	COG1744	ABC transporter substrate-binding protein PnrA-like
NYR47_RS19295	COG2188	Transcriptional regulator
NYR47_RS19300	COG1674	ftsk spoiiie
NYR47_RS19310	COG0740	serine-type endopeptidase activity
NYR47_RS19315	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NYR47_RS19325	COG0527	aspartate kinase activity
NYR47_RS19330	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NYR47_RS19335	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NYR47_RS19340	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NYR47_RS19345	COG1873	PFAM PRC-barrel domain
NYR47_RS19350	COG0612	Peptidase, M16
NYR47_RS19355	COG0726	polysaccharide deacetylase
NYR47_RS19370	COG0196	riboflavin kinase activity
NYR47_RS19380	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NYR47_RS19385	COG1550	Protein conserved in bacteria
NYR47_RS19395	COG1358	cellular component organization or biogenesis
NYR47_RS19400	COG2740	Nucleic-acid-binding protein implicated in transcription termination
NYR47_RS19405	COG0195	Participates in both transcription termination and antitermination
NYR47_RS19425	COG0750	zinc metalloprotease
NYR47_RS19435	COG4589	Belongs to the CDS family
NYR47_RS19450	COG0528	UMP kinase activity
NYR47_RS19455	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NYR47_RS19480	COG4974	Belongs to the 'phage' integrase family
NYR47_RS19490	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NYR47_RS19495	COG0758	DNA mediated transformation
NYR47_RS19500	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
NYR47_RS19525	COG0335	large ribosomal subunit rRNA binding
NYR47_RS19540	COG1837	Belongs to the UPF0109 family
NYR47_RS19550	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NYR47_RS19560	COG0552	protein localization to endoplasmic reticulum
NYR47_RS19565	COG1196	nuclear chromosome segregation
NYR47_RS19575	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NYR47_RS19580	COG1028	Short-chain dehydrogenase reductase Sdr
NYR47_RS19585	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
NYR47_RS19600	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NYR47_RS19605	COG1461	Dihydroxyacetone kinase
NYR47_RS19610	COG1302	Protein conserved in bacteria
NYR47_RS19625	COG1564	THIamine pyrophosphokinase
NYR47_RS19630	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
NYR47_RS19635	COG1162	GTPase activity
NYR47_RS19640	COG2815	serine threonine protein kinase
NYR47_RS19640	COG0515	serine threonine protein kinase
NYR47_RS19645	COG0631	protein serine/threonine phosphatase activity
NYR47_RS19655	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NYR47_RS19655	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NYR47_RS19660	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NYR47_RS19670	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NYR47_RS19675	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NYR47_RS19695	COG1561	YicC-like family, N-terminal region
NYR47_RS19700	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
NYR47_RS19710	COG0006	proline dipeptidase activity
NYR47_RS19800	COG0564	pseudouridine synthase activity
NYR47_RS19820	COG3599	regulation of cell shape
NYR47_RS19825	COG2302	S4 RNA-binding domain
NYR47_RS19830	COG0762	integral membrane protein
NYR47_RS19840	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
NYR47_RS19850	COG1873	PFAM PRC-barrel domain
NYR47_RS19855	COG1191	sigma factor activity
NYR47_RS19860	COG1191	sigma factor activity
NYR47_RS19870	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NYR47_RS19875	COG0849	cell division
NYR47_RS19880	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
NYR47_RS19895	COG0772	Belongs to the SEDS family
NYR47_RS19915	COG0768	penicillin binding
NYR47_RS19920	COG0768	penicillin binding
NYR47_RS19940	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NYR47_RS19955	COG0333	Belongs to the bacterial ribosomal protein bL32 family
NYR47_RS19960	COG1399	metal-binding, possibly nucleic acid-binding protein
NYR47_RS19970	COG3480	Lon protease (S16) C-terminal proteolytic domain
NYR47_RS19975	COG1752	Esterase of the alpha-beta hydrolase superfamily
NYR47_RS19980	COG3314	Sporulation integral membrane protein YlbJ
NYR47_RS19990	COG0742	ribosomal rna small subunit methyltransferase
NYR47_RS20005	COG3679	Belongs to the UPF0342 family
NYR47_RS20010	COG0406	alpha-ribazole phosphatase activity
NYR47_RS20025	COG2340	Cysteine-rich secretory protein family
NYR47_RS20040	COG3336	cytochrome c oxidase
NYR47_RS20075	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
NYR47_RS20080	COG0772	Belongs to the SEDS family
NYR47_RS20090	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
NYR47_RS20095	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
NYR47_RS20105	COG4896	Protein conserved in bacteria
NYR47_RS20120	COG1217	gtp-binding protein TYPA
NYR47_RS20130	COG0483	inositol monophosphate 1-phosphatase activity
NYR47_RS20150	COG1982	Orn Lys Arg decarboxylase major
NYR47_RS20210	COG0022	dehydrogenase e1 component
NYR47_RS20215	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
NYR47_RS20225	COG0242	peptide deformylase activity
NYR47_RS20230	COG0561	phosphatase activity
NYR47_RS20235	COG5503	Protein of unknown function (DUF1447)
NYR47_RS20240	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NYR47_RS20245	COG0569	domain protein
NYR47_RS20260	COG2171	N-acyltransferase activity
NYR47_RS20265	COG0583	DNA-binding transcription factor activity
NYR47_RS20270	COG0517	IMP dehydrogenase activity
NYR47_RS20280	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
NYR47_RS20290	COG4703	Protein of unknown function (DUF1797)
NYR47_RS20310	COG2200	EAL domain
NYR47_RS20315	COG1028	Short-chain dehydrogenase reductase Sdr
NYR47_RS20320	COG1408	metallophosphoesterase
NYR47_RS20330	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NYR47_RS20365	COG2814	Major facilitator Superfamily
NYR47_RS20385	COG3209	COG3209 Rhs family protein
NYR47_RS20395	COG2205	protein histidine kinase activity
NYR47_RS20405	COG0436	Aminotransferase
NYR47_RS20410	COG1609	Transcriptional regulator
NYR47_RS20415	COG3833	ABC-type maltose transport systems, permease component
NYR47_RS20420	COG1175	transmembrane transport
NYR47_RS20425	COG2182	Extracellular solute-binding protein
NYR47_RS20435	COG0366	Alpha amylase catalytic
NYR47_RS20440	COG3842	ATPase activity
NYR47_RS20480	COG0183	Belongs to the thiolase family
NYR47_RS20515	COG1695	Transcriptional regulator
NYR47_RS20520	COG1028	Short-chain dehydrogenase reductase Sdr
NYR47_RS20535	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
NYR47_RS20540	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NYR47_RS20545	COG0436	Aminotransferase
NYR47_RS20580	COG2084	Dehydrogenase
NYR47_RS20590	COG2199	diguanylate cyclase activity
NYR47_RS20595	COG0778	Nitroreductase
NYR47_RS20620	COG1263	PTS System
NYR47_RS20620	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NYR47_RS20620	COG2190	(PTS) system
NYR47_RS20625	COG3711	transcriptional antiterminator
NYR47_RS20635	COG2188	Transcriptional regulator
NYR47_RS20645	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
NYR47_RS20670	COG1547	Domain of unknown function (DUF309)
NYR47_RS20675	COG0456	acetyltransferase
NYR47_RS20680	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NYR47_RS20685	COG4086	secreted protein
NYR47_RS20690	COG0561	phosphatase activity
NYR47_RS20695	COG0697	spore germination
NYR47_RS20710	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NYR47_RS20735	COG0733	neurotransmitter:sodium symporter activity
NYR47_RS20755	COG1686	Belongs to the peptidase S11 family
NYR47_RS20760	COG1725	Transcriptional regulator
NYR47_RS20765	COG1131	(ABC) transporter
NYR47_RS20785	COG1846	Transcriptional regulator
NYR47_RS20800	COG0598	Magnesium transport protein CorA
NYR47_RS20825	COG4974	Belongs to the 'phage' integrase family
NYR47_RS20835	COG0735	belongs to the Fur family
NYR47_RS20840	COG1300	Membrane
NYR47_RS20860	COG0667	Aldo Keto reductase
NYR47_RS20865	COG0656	L-ascorbic acid biosynthetic process
NYR47_RS20870	COG0456	acetyltransferase
NYR47_RS20870	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NYR47_RS20880	COG0737	Belongs to the 5'-nucleotidase family
NYR47_RS20880	COG1525	nuclease
NYR47_RS20880	COG4085	toxin activity
NYR47_RS20890	COG0596	Alpha beta hydrolase
NYR47_RS20895	COG2056	Na+-H+ antiporter family
NYR47_RS20900	COG1609	Transcriptional regulator
NYR47_RS20905	COG0454	-acetyltransferase
NYR47_RS20910	COG1073	alpha beta
NYR47_RS20925	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NYR47_RS20925	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NYR47_RS20930	COG0307	riboflavin synthase, alpha
NYR47_RS20955	COG4106	trans-aconitate 2-methyltransferase activity
NYR47_RS20960	COG1073	alpha beta
NYR47_RS20960	COG2226	methyltransferase
NYR47_RS20975	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NYR47_RS20985	COG1757	Na H antiporter
NYR47_RS20990	COG0737	Belongs to the 5'-nucleotidase family
NYR47_RS21000	COG1522	sequence-specific DNA binding
NYR47_RS21045	COG0300	oxidoreductase activity
NYR47_RS21050	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NYR47_RS21055	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NYR47_RS21060	COG1760	l-serine dehydratase
NYR47_RS21065	COG1760	l-serine dehydratase
NYR47_RS21090	COG1285	pathogenesis
NYR47_RS21105	COG2195	Cleaves the N-terminal amino acid of tripeptides
NYR47_RS21110	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NYR47_RS21125	COG1376	ErfK ybiS ycfS ynhG family protein
NYR47_RS21130	COG4129	membrane
NYR47_RS21135	COG1126	abc transporter atp-binding protein
NYR47_RS21140	COG0765	amino acid transport
NYR47_RS21145	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NYR47_RS21155	COG2816	NAD+ diphosphatase activity
NYR47_RS21160	COG2323	membrane
NYR47_RS21165	COG0772	Belongs to the SEDS family
NYR47_RS21170	COG0508	dehydrogenase complex catalyzes the overall conversion of
NYR47_RS21175	COG0022	dehydrogenase e1 component
NYR47_RS21180	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
NYR47_RS21185	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NYR47_RS21200	COG0280	phosphate acetyltransferase
NYR47_RS21205	COG3290	protein histidine kinase activity
NYR47_RS21205	COG3829	transcription factor binding
NYR47_RS21215	COG0584	glycerophosphoryl diester phosphodiesterase
NYR47_RS21220	COG3093	addiction module antidote protein HigA
NYR47_RS21225	COG1215	transferase activity, transferring glycosyl groups
NYR47_RS21245	COG0745	RESPONSE REGULATOR receiver
NYR47_RS21250	COG0750	zinc metalloprotease
NYR47_RS21255	COG0497	DNA recombination
NYR47_RS21265	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
NYR47_RS21275	COG0142	geranyltranstransferase activity
NYR47_RS21295	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NYR47_RS21300	COG1302	Protein conserved in bacteria
NYR47_RS21305	COG0439	Biotin carboxylase
NYR47_RS21310	COG0511	ligase activity, forming carbon-carbon bonds
NYR47_RS21355	COG3854	ATPases associated with a variety of cellular activities
NYR47_RS21380	COG0006	proline dipeptidase activity
NYR47_RS21395	COG3872	metal-dependent enzyme
NYR47_RS21405	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NYR47_RS21435	COG0095	Lipoate-protein ligase
NYR47_RS21440	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NYR47_RS21450	COG1609	Transcriptional regulator
NYR47_RS21460	COG2076	Multidrug Resistance protein
NYR47_RS21465	COG2076	Multidrug Resistance protein
NYR47_RS21495	COG1131	(ABC) transporter
NYR47_RS21500	COG1725	Transcriptional regulator
NYR47_RS21515	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
NYR47_RS21525	COG0404	The glycine cleavage system catalyzes the degradation of glycine
NYR47_RS21530	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
NYR47_RS21590	COG4970	Tfp pilus assembly protein FimT
NYR47_RS21600	COG1459	type II secretion system
NYR47_RS21605	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NYR47_RS21660	COG1410	methionine synthase
NYR47_RS21660	COG0646	methionine synthase
NYR47_RS21665	COG0646	methionine synthase
NYR47_RS21665	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
NYR47_RS21670	COG0626	cystathionine gamma-synthase activity
NYR47_RS21675	COG0626	cystathionine gamma-synthase activity
NYR47_RS21700	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NYR47_RS21710	COG1940	carbohydrate kinase activity
NYR47_RS21715	COG4483	Protein conserved in bacteria
NYR47_RS21720	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
NYR47_RS21725	COG0267	Belongs to the bacterial ribosomal protein bL33 family
NYR47_RS21730	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
NYR47_RS21735	COG0704	Plays a role in the regulation of phosphate uptake
NYR47_RS21745	COG0581	inorganic phosphate transmembrane transporter activity
NYR47_RS21750	COG0573	inorganic phosphate transmembrane transporter activity
NYR47_RS21755	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
NYR47_RS21760	COG0768	penicillin binding
NYR47_RS21765	COG0477	Major facilitator Superfamily
NYR47_RS21770	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
NYR47_RS21795	COG0735	belongs to the Fur family
NYR47_RS21800	COG1108	ABC-type Mn2 Zn2 transport systems permease components
NYR47_RS21805	COG1121	(ABC) transporter
NYR47_RS21810	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NYR47_RS21840	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NYR47_RS21845	COG2384	SAM-dependent methyltransferase
NYR47_RS21850	COG2010	Cytochrome c
NYR47_RS21855	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NYR47_RS21860	COG0358	DNA primase activity
NYR47_RS21865	COG1671	Belongs to the UPF0178 family
NYR47_RS21875	COG0517	IMP dehydrogenase activity
NYR47_RS21890	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NYR47_RS21895	COG0295	cytidine deaminase activity
NYR47_RS21900	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
NYR47_RS21905	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NYR47_RS21910	COG1480	7TM receptor with intracellular HD hydrolase
NYR47_RS21915	COG1702	phosphate starvation-inducible protein PhoH
NYR47_RS21930	COG1610	YqeY-like protein
NYR47_RS21935	COG0828	Belongs to the bacterial ribosomal protein bS21 family
NYR47_RS21940	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
NYR47_RS21945	COG1385	rRNA (uridine-N3-)-methyltransferase activity
NYR47_RS21955	COG0484	heat shock protein binding
NYR47_RS21970	COG1420	regulation of RNA biosynthetic process
NYR47_RS21975	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NYR47_RS21980	COG1733	regulation of RNA biosynthetic process
NYR47_RS22005	COG1466	dna polymerase III delta subunit
NYR47_RS22015	COG0658	competence protein
NYR47_RS22015	COG2333	competence protein COMEC
NYR47_RS22020	COG2131	deaminase
NYR47_RS22025	COG1596	polysaccharide export
NYR47_RS22025	COG1555	photosystem II stabilization
NYR47_RS22030	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NYR47_RS22035	COG2226	methyltransferase
NYR47_RS22040	COG0799	negative regulation of ribosome biogenesis
NYR47_RS22045	COG1713	HD superfamily hydrolase involved in NAD metabolism
NYR47_RS22050	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NYR47_RS22055	COG1534	Rna-binding protein
NYR47_RS22065	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
NYR47_RS22070	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
NYR47_RS22105	COG0778	Nitroreductase
NYR47_RS22110	COG2357	RelA SpoT domain protein
NYR47_RS22120	COG1785	Belongs to the alkaline phosphatase family
NYR47_RS22130	COG2267	carboxylic ester hydrolase activity
NYR47_RS22165	COG1404	Belongs to the peptidase S8 family
NYR47_RS22170	COG3186	Phenylalanine-4-hydroxylase
NYR47_RS22180	COG2514	catechol 2,3-dioxygenase activity
NYR47_RS22185	COG2259	Doxx family
NYR47_RS22225	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NYR47_RS22235	COG1454	alcohol dehydrogenase
NYR47_RS22235	COG1012	belongs to the aldehyde dehydrogenase family
NYR47_RS22240	COG0626	cystathionine gamma-synthase activity
NYR47_RS22245	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
NYR47_RS22270	COG0768	penicillin binding
NYR47_RS22285	COG0826	peptidase U32
NYR47_RS22290	COG0826	peptidase U32
NYR47_RS22295	COG4122	O-methyltransferase activity
NYR47_RS22300	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NYR47_RS22315	COG4472	Bacterial protein of unknown function (DUF965)
NYR47_RS22330	COG0628	permease
NYR47_RS22350	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
NYR47_RS22365	COG1104	cysteine desulfurase activity
NYR47_RS22370	COG1959	2 iron, 2 sulfur cluster binding
NYR47_RS22375	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
NYR47_RS22385	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
NYR47_RS22420	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NYR47_RS22430	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
NYR47_RS22430	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
NYR47_RS22435	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NYR47_RS22440	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NYR47_RS22440	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NYR47_RS22450	COG2244	polysaccharide biosynthetic process
NYR47_RS22455	COG2323	membrane
NYR47_RS22465	COG1862	Preprotein translocase
NYR47_RS22470	COG0343	queuine tRNA-ribosyltransferase activity
NYR47_RS22485	COG2255	four-way junction helicase activity
NYR47_RS22490	COG0632	four-way junction helicase activity
NYR47_RS22495	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
NYR47_RS22525	COG0157	Belongs to the NadC ModD family
NYR47_RS22530	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
NYR47_RS22535	COG1104	cysteine desulfurase activity
NYR47_RS22540	COG1827	regulation of RNA biosynthetic process
NYR47_RS22545	COG2258	MOSC domain
NYR47_RS22550	COG0077	Prephenate dehydratase
NYR47_RS22555	COG0577	efflux transmembrane transporter activity
NYR47_RS22560	COG0577	efflux transmembrane transporter activity
NYR47_RS22565	COG1136	(ABC) transporter
NYR47_RS22570	COG5002	protein histidine kinase activity
NYR47_RS22575	COG0745	RESPONSE REGULATOR receiver
NYR47_RS22585	COG3290	protein histidine kinase activity
NYR47_RS22595	COG2868	ribosomal protein
NYR47_RS22605	COG1530	ribonuclease E activity
NYR47_RS22610	COG1994	Peptidase M50
NYR47_RS22615	COG0739	heme binding
NYR47_RS22620	COG2894	cell division
NYR47_RS22640	COG1077	Cell shape determining protein MreB Mrl
NYR47_RS22660	COG0285	dihydrofolate synthase activity
NYR47_RS22675	COG1388	LysM domain
NYR47_RS22685	COG0113	porphobilinogen synthase activity
NYR47_RS22690	COG1587	Uroporphyrinogen-III synthase
NYR47_RS22700	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
NYR47_RS22710	COG1846	Transcriptional regulator
NYR47_RS22715	COG1764	response to oxidative stress
NYR47_RS22730	COG0470	DNA polymerase III
NYR47_RS22730	COG1067	ATP-dependent peptidase activity
NYR47_RS22775	COG0622	Phosphoesterase
NYR47_RS22790	COG5401	PFAM Sporulation and spore germination
NYR47_RS22805	COG2197	response regulator
NYR47_RS22810	COG2233	PERMEase
NYR47_RS22815	COG0402	S-adenosylhomocysteine deaminase activity
NYR47_RS22820	COG1983	PspC domain protein
NYR47_RS22825	COG1396	sequence-specific DNA binding
NYR47_RS22830	COG0697	spore germination
NYR47_RS22840	COG1959	2 iron, 2 sulfur cluster binding
NYR47_RS22845	COG1668	transmembrane transport
NYR47_RS22850	COG4152	abc transporter atp-binding protein
NYR47_RS22855	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
NYR47_RS22860	COG1360	Flagellar Motor Protein
NYR47_RS22865	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
NYR47_RS22870	COG1876	peptidase activity
NYR47_RS22875	COG0824	Thioesterase
NYR47_RS22880	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
NYR47_RS22885	COG1053	succinate dehydrogenase
NYR47_RS22890	COG2009	succinate dehydrogenase
NYR47_RS22895	COG1719	4-vinyl reductase, 4VR
NYR47_RS22900	COG0322	excinuclease ABC activity
NYR47_RS22905	COG3118	belongs to the thioredoxin family
NYR47_RS22910	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
NYR47_RS22915	COG2086	electron transfer activity
NYR47_RS22920	COG1024	Enoyl-CoA hydratase
NYR47_RS22925	COG1309	transcriptional regulator
NYR47_RS22930	COG0318	PFAM AMP-dependent synthetase and ligase
NYR47_RS22960	COG2318	DinB family
NYR47_RS22990	COG1131	(ABC) transporter
NYR47_RS22995	COG2205	protein histidine kinase activity
NYR47_RS23000	COG0745	RESPONSE REGULATOR receiver
NYR47_RS23010	COG4895	conserved protein (DUF2196)
NYR47_RS23015	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
NYR47_RS23025	COG4509	Sortase family
NYR47_RS23030	COG1120	ATPase activity
NYR47_RS23045	COG5386	Cell surface protein
NYR47_RS23055	COG5386	Cell surface protein
NYR47_RS23060	COG1114	Component of the transport system for branched-chain amino acids
NYR47_RS23065	COG1187	pseudouridine synthase activity
NYR47_RS23075	COG1796	DNA polymerase
NYR47_RS23075	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
NYR47_RS23080	COG1286	toxin biosynthetic process
NYR47_RS23085	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
NYR47_RS23120	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NYR47_RS23130	COG1418	mRNA catabolic process
NYR47_RS23150	COG2814	Major facilitator Superfamily
NYR47_RS23155	COG1566	PFAM secretion protein HlyD family protein
NYR47_RS23160	COG1309	transcriptional regulator
NYR47_RS23165	COG1363	Peptidase, m42
NYR47_RS23190	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NYR47_RS23200	COG1484	DNA-dependent DNA replication
NYR47_RS23205	COG3611	Membrane attachment protein
NYR47_RS23215	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
NYR47_RS23220	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
NYR47_RS23225	COG0237	dephospho-CoA kinase activity
NYR47_RS23230	COG1971	Probably functions as a manganese efflux pump
NYR47_RS23240	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NYR47_RS23240	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NYR47_RS23245	COG5002	protein histidine kinase activity
NYR47_RS23250	COG0745	RESPONSE REGULATOR receiver
NYR47_RS23275	COG0538	isocitrate dehydrogenase activity
NYR47_RS23280	COG0372	Belongs to the citrate synthase family
NYR47_RS23290	COG0628	permease
NYR47_RS23295	COG3030	protein affecting phage T7 exclusion by the F plasmid
NYR47_RS23320	COG1725	Transcriptional regulator
NYR47_RS23325	COG0281	malic enzyme
NYR47_RS23330	COG0587	DNA-directed DNA polymerase activity
NYR47_RS23345	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
NYR47_RS23360	COG4109	DRTGG domain
NYR47_RS23375	COG0006	proline dipeptidase activity
NYR47_RS23415	COG0662	Cupin 2, conserved barrel domain protein
NYR47_RS23425	COG1476	TRANSCRIPTIONal
NYR47_RS23440	COG1028	Short-chain dehydrogenase reductase Sdr
NYR47_RS23445	COG0589	response to stress
NYR47_RS23485	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NYR47_RS23510	COG0827	DNA restriction-modification system
NYR47_RS23515	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
NYR47_RS23520	COG3874	Sporulation protein YtfJ
NYR47_RS23535	COG1574	metal-dependent hydrolase with the TIM-barrel fold
NYR47_RS23545	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NYR47_RS23560	COG1104	cysteine desulfurase activity
NYR47_RS23565	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
NYR47_RS23570	COG0583	DNA-binding transcription factor activity
NYR47_RS23575	COG0697	spore germination
NYR47_RS23580	COG1309	transcriptional regulator
NYR47_RS23585	COG1956	GAF domain-containing protein
NYR47_RS23625	COG1595	DNA-templated transcription, initiation
NYR47_RS23635	COG0110	maltose O-acetyltransferase activity
NYR47_RS23640	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NYR47_RS23645	COG0454	-acetyltransferase
NYR47_RS23650	COG0517	IMP dehydrogenase activity
NYR47_RS23655	COG0123	including yeast histone deacetylase and acetoin utilization protein
NYR47_RS23670	COG0745	RESPONSE REGULATOR receiver
NYR47_RS23675	COG5002	protein histidine kinase activity
NYR47_RS23680	COG0666	response to abiotic stimulus
NYR47_RS23710	COG1609	Transcriptional regulator
NYR47_RS23720	COG4851	CamS sex pheromone cAM373 precursor
NYR47_RS23725	COG3118	belongs to the thioredoxin family
NYR47_RS23735	COG2309	aminopeptidase activity
NYR47_RS23780	COG1674	ftsk spoiiie
NYR47_RS23785	COG1388	LysM domain
NYR47_RS23785	COG0860	N-Acetylmuramoyl-L-alanine amidase
NYR47_RS23795	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NYR47_RS23800	COG4848	Belongs to the UPF0354 family
NYR47_RS23805	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NYR47_RS23810	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
NYR47_RS23815	COG1363	Peptidase, m42
NYR47_RS23825	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NYR47_RS23840	COG0510	thiamine kinase activity
NYR47_RS23845	COG1523	belongs to the glycosyl hydrolase 13 family
NYR47_RS23855	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NYR47_RS23860	COG1349	DNA-binding transcription factor activity
NYR47_RS23865	COG1187	pseudouridine synthase activity
NYR47_RS23870	COG2244	polysaccharide biosynthetic process
NYR47_RS23875	COG2081	HI0933 family
NYR47_RS23880	COG2814	Major facilitator Superfamily
NYR47_RS23890	COG3832	glyoxalase III activity
NYR47_RS23910	COG1329	Transcriptional regulator
NYR47_RS23935	COG0314	molybdopterin synthase activity
NYR47_RS23940	COG1763	Mo-molybdopterin cofactor biosynthetic process
NYR47_RS23945	COG0303	'Molybdopterin
NYR47_RS23955	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NYR47_RS23960	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
NYR47_RS23980	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NYR47_RS23990	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NYR47_RS24030	COG2814	Major facilitator Superfamily
NYR47_RS24035	COG0475	glutathione-regulated potassium exporter activity
NYR47_RS24040	COG0490	domain, Protein
NYR47_RS24045	COG0582	viral genome integration into host DNA
NYR47_RS24060	COG1136	(ABC) transporter
NYR47_RS24080	COG1242	4 iron, 4 sulfur cluster binding
NYR47_RS24085	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
NYR47_RS24090	COG1794	racemase activity, acting on amino acids and derivatives
NYR47_RS24105	COG2267	carboxylic ester hydrolase activity
NYR47_RS24110	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
NYR47_RS24115	COG0671	phosphoesterase, PA-phosphatase related
NYR47_RS24120	COG0438	transferase activity, transferring glycosyl groups
NYR47_RS24180	COG3852	Histidine kinase
NYR47_RS24185	COG3852	Histidine kinase
NYR47_RS24195	COG2267	carboxylic ester hydrolase activity
NYR47_RS24220	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NYR47_RS24225	COG1116	anion transmembrane transporter activity
NYR47_RS24230	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NYR47_RS24255	COG0494	nUDIX hydrolase
NYR47_RS24285	COG2076	Multidrug Resistance protein
NYR47_RS24290	COG2076	Multidrug Resistance protein
NYR47_RS24295	COG0789	Transcriptional regulator
NYR47_RS24300	COG1854	S-ribosylhomocysteine lyase activity
NYR47_RS24310	COG0288	reversible hydration of carbon dioxide
NYR47_RS24315	COG1271	oxidase subunit
NYR47_RS24320	COG1294	oxidase, subunit
NYR47_RS24335	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NYR47_RS24355	COG1842	Phage shock protein A
NYR47_RS24385	COG5002	protein histidine kinase activity
NYR47_RS24390	COG0745	RESPONSE REGULATOR receiver
NYR47_RS24415	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
NYR47_RS24420	COG1597	lipid kinase activity
NYR47_RS24440	COG0577	efflux transmembrane transporter activity
NYR47_RS24445	COG1136	(ABC) transporter
NYR47_RS24475	COG0586	Pfam SNARE associated Golgi protein
NYR47_RS24480	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
NYR47_RS24485	COG0577	efflux transmembrane transporter activity
NYR47_RS24490	COG1136	(ABC) transporter
NYR47_RS24495	COG3708	Transcriptional regulator
NYR47_RS24495	COG2207	Transcriptional regulator
NYR47_RS24505	COG1131	(ABC) transporter
NYR47_RS24510	COG5658	integral membrane protein
NYR47_RS24515	COG0640	Transcriptional regulator
NYR47_RS24525	COG1595	DNA-templated transcription, initiation
NYR47_RS24530	COG0745	RESPONSE REGULATOR receiver
NYR47_RS24535	COG2205	protein histidine kinase activity
NYR47_RS24540	COG0577	efflux transmembrane transporter activity
NYR47_RS24545	COG0577	efflux transmembrane transporter activity
NYR47_RS24550	COG1136	(ABC) transporter
NYR47_RS24555	COG0577	efflux transmembrane transporter activity
NYR47_RS24580	COG2188	Transcriptional regulator
NYR47_RS24600	COG3964	amidohydrolase
NYR47_RS24615	COG0745	RESPONSE REGULATOR receiver
NYR47_RS24620	COG4948	Mandelate Racemase Muconate Lactonizing
NYR47_RS24630	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
NYR47_RS24635	COG0596	Alpha beta hydrolase
NYR47_RS24645	COG1169	isochorismate synthase
NYR47_RS24650	COG1575	Belongs to the MenA family. Type 1 subfamily
NYR47_RS24655	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
NYR47_RS24660	COG1278	Cold shock
NYR47_RS24685	COG0058	SHG alpha-glucan phosphorylase activity
NYR47_RS24695	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
NYR47_RS24700	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
NYR47_RS24850	COG1285	pathogenesis
NYR47_RS24855	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NYR47_RS24870	COG2155	Conserved Protein
NYR47_RS24875	COG1098	S1 RNA binding domain
NYR47_RS24880	COG0436	Aminotransferase
NYR47_RS24885	COG1522	sequence-specific DNA binding
NYR47_RS24890	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NYR47_RS24895	COG2267	carboxylic ester hydrolase activity
NYR47_RS24905	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
NYR47_RS24925	COG5018	Exonuclease
NYR47_RS24930	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
NYR47_RS24950	COG2050	protein possibly involved in aromatic compounds catabolism
NYR47_RS24960	COG1268	BioY protein
NYR47_RS24965	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NYR47_RS24970	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NYR47_RS24985	COG3584	3D domain protein
NYR47_RS25000	COG1252	NADH dehydrogenase
NYR47_RS25010	COG3708	Transcriptional regulator
NYR47_RS25025	COG1683	Conserved Protein
NYR47_RS25045	COG0316	Belongs to the HesB IscA family
NYR47_RS25060	COG1252	NADH dehydrogenase
NYR47_RS25070	COG2274	protein secretion by the type I secretion system
NYR47_RS25075	COG0390	transport system, permease component
NYR47_RS25080	COG2824	Alkylphosphonate utilization operon protein PhnA
NYR47_RS25125	COG4837	Protein of unknown function (DUF1462)
NYR47_RS25130	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
NYR47_RS25140	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
NYR47_RS25145	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
NYR47_RS25165	COG1358	cellular component organization or biogenesis
NYR47_RS25185	COG2249	NAD(P)H dehydrogenase (quinone) activity
NYR47_RS25190	COG0647	UMP catabolic process
NYR47_RS25200	COG2445	Protein of unknown function DUF86
NYR47_RS25205	COG1494	fructose-1,6-bisphosphatase
NYR47_RS25225	COG4470	Protein conserved in bacteria
NYR47_RS25235	COG0789	Transcriptional regulator
NYR47_RS25240	COG4377	Putative membrane peptidase family (DUF2324)
NYR47_RS25265	COG0739	heme binding
NYR47_RS25275	COG3377	Domain of unknown function (DUF1805)
NYR47_RS25280	COG0737	Belongs to the 5'-nucleotidase family
NYR47_RS25285	COG0719	Fe-S assembly protein
NYR47_RS25290	COG0822	iron-sulfur transferase activity
NYR47_RS25295	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NYR47_RS25300	COG0719	Fe-S assembly protein
NYR47_RS25305	COG0396	ATPase activity
NYR47_RS25310	COG1464	Belongs to the NlpA lipoprotein family
NYR47_RS25315	COG1464	Belongs to the NlpA lipoprotein family
NYR47_RS25320	COG2011	ABC-type metal ion transport system permease component
NYR47_RS25335	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NYR47_RS25340	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
NYR47_RS25355	COG1393	Belongs to the ArsC family
NYR47_RS25385	COG0039	L-malate dehydrogenase activity
NYR47_RS25405	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NYR47_RS25410	COG1960	acyl-CoA dehydrogenase activity
NYR47_RS25415	COG0183	Belongs to the thiolase family
NYR47_RS25420	COG1024	Enoyl-CoA hydratase
NYR47_RS25420	COG1250	3-hydroxyacyl-CoA dehydrogenase
NYR47_RS25430	COG1686	Belongs to the peptidase S11 family
NYR47_RS25445	COG0011	TIGRFAM Protein of
NYR47_RS25450	COG0840	transmembrane signaling receptor activity
NYR47_RS25465	COG2814	Major facilitator Superfamily
NYR47_RS25470	COG0531	amino acid
NYR47_RS25495	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NYR47_RS25530	COG0586	Pfam SNARE associated Golgi protein
NYR47_RS25540	COG1376	ErfK ybiS ycfS ynhG family protein
NYR47_RS25545	COG0745	RESPONSE REGULATOR receiver
NYR47_RS25550	COG5002	protein histidine kinase activity
NYR47_RS25570	COG0840	transmembrane signaling receptor activity
NYR47_RS25575	COG0840	transmembrane signaling receptor activity
NYR47_RS25580	COG2151	metal-sulfur cluster biosynthetic enzyme
NYR47_RS25585	COG3227	Zinc metalloprotease (Elastase)
NYR47_RS25605	COG0586	Pfam SNARE associated Golgi protein
NYR47_RS25610	COG0475	glutathione-regulated potassium exporter activity
NYR47_RS25615	COG0490	domain, Protein
NYR47_RS25620	COG1115	amino acid carrier protein
NYR47_RS25625	COG0783	Belongs to the Dps family
NYR47_RS25640	COG1611	Belongs to the LOG family
NYR47_RS25650	COG1528	Iron-storage protein
NYR47_RS25655	COG2311	Membrane
NYR47_RS25660	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NYR47_RS25665	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NYR47_RS25670	COG1115	amino acid carrier protein
NYR47_RS25675	COG1115	amino acid carrier protein
NYR47_RS25680	COG2910	NAD(P)H-binding
NYR47_RS25695	COG0656	L-ascorbic acid biosynthetic process
NYR47_RS25700	COG2814	Major facilitator Superfamily
NYR47_RS25705	COG1733	regulation of RNA biosynthetic process
NYR47_RS25715	COG1252	NADH dehydrogenase
NYR47_RS25720	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NYR47_RS25735	COG0840	transmembrane signaling receptor activity
NYR47_RS25735	COG3290	protein histidine kinase activity
NYR47_RS25745	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NYR47_RS25770	COG0488	(ABC) transporter
NYR47_RS25775	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NYR47_RS25825	COG1522	sequence-specific DNA binding
NYR47_RS25830	COG0288	reversible hydration of carbon dioxide
NYR47_RS25835	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
NYR47_RS25840	COG2233	PERMEase
NYR47_RS25885	COG0557	exoribonuclease II activity
NYR47_RS25890	COG1647	Serine aminopeptidase, S33
NYR47_RS25895	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
NYR47_RS25900	COG1346	cytolysis
NYR47_RS25935	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
NYR47_RS25950	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
NYR47_RS25990	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NYR47_RS26005	COG2323	membrane
NYR47_RS26015	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NYR47_RS26025	COG0391	Required for morphogenesis under gluconeogenic growth conditions
NYR47_RS26035	COG1051	belongs to the nudix hydrolase family
NYR47_RS26045	COG0492	ferredoxin-NADP+ reductase activity
NYR47_RS26050	COG0457	Tetratricopeptide repeat
NYR47_RS26055	COG0110	maltose O-acetyltransferase activity
NYR47_RS26075	COG1950	PFAM Membrane protein of
NYR47_RS26085	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NYR47_RS26090	COG0556	nucleotide-excision repair
NYR47_RS26105	COG0789	Transcriptional regulator
NYR47_RS26135	COG0583	DNA-binding transcription factor activity
NYR47_RS26145	COG0655	NAD(P)H dehydrogenase (quinone) activity
NYR47_RS26150	COG0488	(ABC) transporter
NYR47_RS26160	COG1132	(ABC) transporter
NYR47_RS26165	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NYR47_RS26170	COG0793	Belongs to the peptidase S41A family
NYR47_RS26170	COG3409	Peptidoglycan-binding domain 1 protein
NYR47_RS26175	COG2177	Part of the ABC transporter FtsEX involved in
NYR47_RS26180	COG2884	Cell division ATP-binding protein ftsE
NYR47_RS26200	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
NYR47_RS26205	COG1278	Cold shock
NYR47_RS26210	COG1040	competence protein
NYR47_RS26215	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
NYR47_RS26220	COG0791	NLP P60 protein
NYR47_RS26220	COG1388	LysM domain
NYR47_RS26225	COG1733	regulation of RNA biosynthetic process
NYR47_RS26230	COG1307	EDD domain protein, DegV family
NYR47_RS26235	COG1739	Uncharacterized protein family UPF0029
NYR47_RS26240	COG1316	TRANSCRIPTIONal
NYR47_RS26245	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
NYR47_RS26250	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
NYR47_RS26255	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NYR47_RS26265	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
NYR47_RS26265	COG3933	PFAM sigma-54 factor interaction domain-containing protein
NYR47_RS26285	COG1486	melibiose metabolic process
NYR47_RS26290	COG1447	Phosphotransferase system cellobiose-specific component IIA
NYR47_RS26295	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
NYR47_RS26305	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
NYR47_RS26305	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
NYR47_RS26315	COG1447	Phosphotransferase system cellobiose-specific component IIA
NYR47_RS26325	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
NYR47_RS26330	COG1301	dicarboxylic acid transport
NYR47_RS26340	COG0346	lactoylglutathione lyase activity
NYR47_RS26345	COG1511	domain protein
NYR47_RS26350	COG0583	DNA-binding transcription factor activity
NYR47_RS26355	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
NYR47_RS26365	COG1271	oxidase subunit
NYR47_RS26370	COG1294	oxidase, subunit
NYR47_RS26375	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
NYR47_RS26385	COG1620	l-lactate permease
NYR47_RS26395	COG2389	metal-binding protein
NYR47_RS26405	COG1368	sulfuric ester hydrolase activity
NYR47_RS26415	COG0791	NLP P60 protein
NYR47_RS26415	COG1388	LysM domain
NYR47_RS26420	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NYR47_RS26430	COG1215	transferase activity, transferring glycosyl groups
NYR47_RS26440	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
NYR47_RS26445	COG1388	LysM domain
NYR47_RS26445	COG3584	3D domain protein
NYR47_RS26455	COG4715	Zinc finger, swim domain protein
NYR47_RS26460	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
NYR47_RS26500	COG0577	efflux transmembrane transporter activity
NYR47_RS26505	COG1136	(ABC) transporter
NYR47_RS26530	COG3850	Histidine kinase
NYR47_RS26530	COG5002	protein histidine kinase activity
NYR47_RS26535	COG0745	RESPONSE REGULATOR receiver
NYR47_RS26540	COG1482	cell wall glycoprotein biosynthetic process
NYR47_RS26545	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NYR47_RS26545	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NYR47_RS26545	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NYR47_RS26550	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NYR47_RS26550	COG3711	transcriptional antiterminator
NYR47_RS26555	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NYR47_RS26560	COG4750	Nucleotidyl transferase
NYR47_RS26565	COG0697	spore germination
NYR47_RS26575	COG3475	LICD family
NYR47_RS26590	COG1482	cell wall glycoprotein biosynthetic process
NYR47_RS26595	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
NYR47_RS26595	COG0662	Cupin 2, conserved barrel domain protein
NYR47_RS26610	COG0438	transferase activity, transferring glycosyl groups
NYR47_RS26650	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NYR47_RS26655	COG4464	protein tyrosine phosphatase activity
NYR47_RS26660	COG0489	protein tyrosine kinase activity
NYR47_RS26665	COG3944	biosynthesis protein
NYR47_RS26670	COG0489	protein tyrosine kinase activity
NYR47_RS26685	COG1609	Transcriptional regulator
NYR47_RS26700	COG0739	heme binding
NYR47_RS26715	COG3279	Response regulator of the LytR AlgR family
NYR47_RS26720	COG2385	sporulation resulting in formation of a cellular spore
NYR47_RS26735	COG4836	Membrane
NYR47_RS26740	COG1007	ATP synthesis coupled electron transport
NYR47_RS26745	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NYR47_RS26750	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
NYR47_RS26760	COG0839	Belongs to the complex I subunit 6 family
NYR47_RS26780	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NYR47_RS26815	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NYR47_RS26825	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NYR47_RS26845	COG0356	it plays a direct role in the translocation of protons across the membrane
NYR47_RS26880	COG0698	ribose 5-phosphate isomerase
NYR47_RS26890	COG2190	(PTS) system
NYR47_RS26895	COG2259	Doxx family
NYR47_RS26900	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NYR47_RS26920	COG0009	L-threonylcarbamoyladenylate synthase
NYR47_RS26940	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NYR47_RS26955	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
NYR47_RS26960	COG1494	fructose-1,6-bisphosphatase
NYR47_RS26980	COG4821	SIS domain
NYR47_RS26985	COG0504	CTP synthase activity
NYR47_RS27000	COG1960	acyl-CoA dehydrogenase activity
NYR47_RS27005	COG1960	acyl-CoA dehydrogenase activity
NYR47_RS27010	COG1250	3-hydroxyacyl-CoA dehydrogenase
NYR47_RS27020	COG0247	lactate metabolic process
NYR47_RS27020	COG2181	nitrate reductase activity
NYR47_RS27025	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NYR47_RS27035	COG3300	MHYT domain
NYR47_RS27035	COG5001	Diguanylate cyclase
NYR47_RS27050	COG3227	Zinc metalloprotease (Elastase)
NYR47_RS27055	COG2197	response regulator
NYR47_RS27060	COG4585	Histidine kinase
NYR47_RS27065	COG0842	Transport permease protein
NYR47_RS27070	COG1131	(ABC) transporter
NYR47_RS27075	COG0024	Methionine aminopeptidase
NYR47_RS27085	COG2234	aminopeptidase activity
NYR47_RS27105	COG4506	Protein conserved in bacteria
NYR47_RS27110	COG1619	proteins homologs of microcin C7 resistance protein MccF
NYR47_RS27130	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
NYR47_RS27135	COG2814	Major facilitator Superfamily
NYR47_RS27140	COG0789	Transcriptional regulator
NYR47_RS27145	COG0584	glycerophosphoryl diester phosphodiesterase
NYR47_RS27150	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NYR47_RS27160	COG1994	Peptidase M50
NYR47_RS27170	COG1078	dGTPase activity
NYR47_RS27175	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NYR47_RS27180	COG1120	ATPase activity
NYR47_RS27185	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NYR47_RS27190	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NYR47_RS27195	COG4844	belongs to the
NYR47_RS27210	COG0280	phosphate acetyltransferase
NYR47_RS27225	COG3773	Cell wall hydrolase
NYR47_RS27235	COG2363	Small membrane protein
NYR47_RS27245	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NYR47_RS27250	COG2233	PERMEase
NYR47_RS27255	COG0561	phosphatase activity
NYR47_RS27260	COG2814	Major facilitator Superfamily
NYR47_RS27270	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
NYR47_RS27275	COG1131	(ABC) transporter
NYR47_RS27280	COG2755	lipolytic protein G-D-S-L family
NYR47_RS27285	COG1609	Transcriptional regulator
NYR47_RS27295	COG0460	homoserine dehydrogenase
NYR47_RS27305	COG2873	o-acetylhomoserine
NYR47_RS27315	COG1011	Hydrolase
NYR47_RS27320	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NYR47_RS27330	COG2197	response regulator
NYR47_RS27335	COG4585	Histidine kinase
NYR47_RS27335	COG2203	Gaf domain
NYR47_RS27340	COG0351	phosphomethylpyrimidine kinase
NYR47_RS27345	COG3706	GGDEF domain
NYR47_RS27350	COG2879	small protein
NYR47_RS27355	COG1966	Carbon starvation protein
NYR47_RS27360	COG3279	Response regulator of the LytR AlgR family
NYR47_RS27365	COG0477	Major facilitator Superfamily
NYR47_RS27375	COG0438	transferase activity, transferring glycosyl groups
NYR47_RS27390	COG0840	transmembrane signaling receptor activity
NYR47_RS27400	COG1607	acyl-coa hydrolase
NYR47_RS27410	COG1215	transferase activity, transferring glycosyl groups
NYR47_RS27420	COG1309	transcriptional regulator
NYR47_RS27425	COG0488	(ABC) transporter
NYR47_RS27445	COG0463	Glycosyl transferase, family 2
NYR47_RS27450	COG1309	transcriptional regulator
NYR47_RS27455	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NYR47_RS27460	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NYR47_RS27460	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NYR47_RS27465	COG0628	permease
NYR47_RS27485	COG3275	phosphorelay sensor kinase activity
NYR47_RS27490	COG2814	Major facilitator Superfamily
NYR47_RS27495	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
NYR47_RS27500	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
NYR47_RS27505	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
NYR47_RS27525	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NYR47_RS27530	COG1272	protein, Hemolysin III
NYR47_RS27555	COG1164	Oligoendopeptidase f
NYR47_RS27590	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
NYR47_RS27635	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NYR47_RS27640	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
NYR47_RS27645	COG4853	Protein conserved in bacteria
NYR47_RS27655	COG5002	protein histidine kinase activity
NYR47_RS27660	COG0745	RESPONSE REGULATOR receiver
NYR47_RS27690	COG0305	Participates in initiation and elongation during chromosome replication
NYR47_RS27700	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
NYR47_RS27705	COG4241	membrane
NYR47_RS27715	COG0629	single-stranded DNA binding
NYR47_RS27725	COG0012	GTP binding
NYR47_RS27730	COG4481	Protein conserved in bacteria
NYR47_RS27735	COG0668	transmembrane transport
NYR47_RS27745	COG1475	DNA binding
NYR47_RS27750	COG1192	Involved in chromosome partitioning
NYR47_RS27775	COG1847	R3H domain protein
NYR47_RS27780	COG0706	membrane insertase activity
NYR47_RS27790	COG0230	Belongs to the bacterial ribosomal protein bL34 family
NYR47_RS27835	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
NYR47_RS27875	COG0741	lytic transglycosylase activity
NYR47_RS27875	COG0791	NLP P60 protein
NYR47_RS27900	COG5504	Zn-dependent protease
NYR47_RS27905	COG0789	Transcriptional regulator
NYR47_RS27910	COG0789	Transcriptional regulator
NYR47_RS27980	COG3409	Peptidoglycan-binding domain 1 protein
NYR47_RS27980	COG3773	Cell wall hydrolase
NYR47_RS28010	COG0741	lytic transglycosylase activity
NYR47_RS28015	COG5002	protein histidine kinase activity
NYR47_RS28020	COG0745	RESPONSE REGULATOR receiver
NYR47_RS28030	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NYR47_RS28035	COG0577	efflux transmembrane transporter activity
NYR47_RS28040	COG1136	(ABC) transporter
NYR47_RS28045	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NYR47_RS28065	COG1404	Belongs to the peptidase S8 family
NYR47_RS28075	COG2239	Acts as a magnesium transporter
NYR47_RS28130	COG1309	transcriptional regulator
NYR47_RS28135	COG2814	Major facilitator Superfamily
NYR47_RS28145	COG0657	acetylesterase activity
NYR47_RS28155	COG1846	Transcriptional regulator
NYR47_RS28200	COG0457	Tetratricopeptide repeat
NYR47_RS28240	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NYR47_RS28260	COG3620	sequence-specific DNA binding
NYR47_RS28285	COG0741	lytic transglycosylase activity
NYR47_RS28285	COG1196	nuclear chromosome segregation
NYR47_RS28285	COG0739	heme binding
NYR47_RS28530	COG1609	Transcriptional regulator
NYR47_RS28535	COG2814	Major facilitator Superfamily
NYR47_RS28540	COG0673	inositol 2-dehydrogenase activity
NYR47_RS28570	COG3718	enzyme involved in inositol metabolism
NYR47_RS28580	COG0772	Belongs to the SEDS family
NYR47_RS28595	COG0457	Tetratricopeptide repeat
NYR47_RS28640	COG2814	Major facilitator Superfamily
NYR47_RS28650	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
NYR47_RS28670	COG0745	RESPONSE REGULATOR receiver
NYR47_RS28675	COG2205	protein histidine kinase activity
NYR47_RS28720	COG1404	Belongs to the peptidase S8 family
NYR47_RS28740	COG0640	Transcriptional regulator
NYR47_RS28745	COG2814	Major facilitator Superfamily
NYR47_RS28775	COG0519	Catalyzes the synthesis of GMP from XMP
NYR47_RS28800	COG0457	Tetratricopeptide repeat
NYR47_RS28815	COG0697	spore germination
NYR47_RS28825	COG3397	chitin binding
NYR47_RS28830	COG0823	Involved in the tonB-independent uptake of proteins
NYR47_RS28840	COG1252	NADH dehydrogenase
NYR47_RS28850	COG1183	phosphatidylcholine synthase activity
NYR47_RS28885	COG3104	oligopeptide transport
NYR47_RS28890	COG1073	alpha beta
NYR47_RS28900	COG1733	regulation of RNA biosynthetic process
NYR47_RS28920	COG1876	peptidase activity
NYR47_RS28925	COG4974	Belongs to the 'phage' integrase family
NYR47_RS28940	COG2239	Acts as a magnesium transporter
NYR47_RS28945	COG0772	Belongs to the SEDS family
NYR47_RS28970	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
NYR47_RS29030	COG0583	DNA-binding transcription factor activity
NYR47_RS29040	COG0367	asparagine synthase
NYR47_RS29060	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
NYR47_RS29075	COG3620	sequence-specific DNA binding
NYR47_RS29085	COG5444	nuclease activity
NYR47_RS29095	COG1073	alpha beta
NYR47_RS29110	COG2732	(Barnase) inhibitor
NYR47_RS29250	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NYR47_RS29250	COG4499	WXG100 protein secretion system (Wss), protein YukC
NYR47_RS29260	COG0577	efflux transmembrane transporter activity
NYR47_RS29265	COG1136	(ABC) transporter
NYR47_RS29270	COG2205	protein histidine kinase activity
NYR47_RS29275	COG0745	RESPONSE REGULATOR receiver
NYR47_RS29280	COG0577	efflux transmembrane transporter activity
NYR47_RS29285	COG1136	(ABC) transporter
NYR47_RS29290	COG5002	protein histidine kinase activity
NYR47_RS29330	COG5002	protein histidine kinase activity
NYR47_RS29360	COG1136	(ABC) transporter
NYR47_RS29385	COG0577	efflux transmembrane transporter activity
NYR47_RS29390	COG1136	(ABC) transporter
NYR47_RS29395	COG0745	RESPONSE REGULATOR receiver
NYR47_RS29400	COG2205	protein histidine kinase activity
NYR47_RS29435	COG2814	Major facilitator Superfamily
NYR47_RS29485	COG1136	(ABC) transporter
NYR47_RS29505	COG0778	Nitroreductase
NYR47_RS29520	COG2409	Drug exporters of the RND superfamily
NYR47_RS29555	COG0768	penicillin binding
NYR47_RS29565	COG1595	DNA-templated transcription, initiation
NYR47_RS29600	COG0456	acetyltransferase
NYR47_RS29600	COG1846	Transcriptional regulator
NYR47_RS29620	COG1136	(ABC) transporter
NYR47_RS29625	COG0577	efflux transmembrane transporter activity
NYR47_RS29630	COG0833	amino acid
NYR47_RS29635	COG2040	homocysteine
NYR47_RS29680	COG2732	(Barnase) inhibitor
NYR47_RS29725	COG0825	malonyl-CoA metabolic process
NYR47_RS29740	COG1278	Cold shock
NYR47_RS29910	COG2814	Major facilitator Superfamily
NYR47_RS29915	COG1309	transcriptional regulator
NYR47_RS29950	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NYR47_RS30005	COG2169	Transcriptional regulator
NYR47_RS30110	COG1136	(ABC) transporter
NYR47_RS30135	COG2002	toxin-antitoxin pair type II binding
NYR47_RS30145	COG1136	(ABC) transporter
NYR47_RS30150	COG0577	efflux transmembrane transporter activity
NYR47_RS30155	COG0745	RESPONSE REGULATOR receiver
NYR47_RS30160	COG2205	protein histidine kinase activity
NYR47_RS30165	COG2133	pyrroloquinoline quinone binding
NYR47_RS30165	COG5183	chlorophyll binding
NYR47_RS30185	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
NYR47_RS30185	COG4797	methyltransferase
NYR47_RS30285	COG4644	lycopene metabolic process
NYR47_RS30300	COG0772	Belongs to the SEDS family
NYR47_RS30310	COG0741	lytic transglycosylase activity
NYR47_RS30335	COG1475	DNA binding
NYR47_RS30340	COG0737	Belongs to the 5'-nucleotidase family
NYR47_RS30355	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NYR47_RS30365	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NYR47_RS30390	COG2211	Major facilitator Superfamily
NYR47_RS30405	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NYR47_RS30410	COG1404	Belongs to the peptidase S8 family
NYR47_RS30520	COG1028	Short-chain dehydrogenase reductase Sdr
NYR47_RS30525	COG1309	transcriptional regulator
NYR47_RS30530	COG2357	RelA SpoT domain protein
NYR47_RS30540	COG2814	Major facilitator Superfamily
NYR47_RS30570	COG1819	glycosyl
NYR47_RS30580	COG0768	penicillin binding
NYR47_RS30595	COG0596	Alpha beta hydrolase
NYR47_RS30605	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NYR47_RS30625	COG1794	racemase activity, acting on amino acids and derivatives
NYR47_RS30630	COG1247	-acetyltransferase
NYR47_RS30640	COG1695	Transcriptional regulator
NYR47_RS30650	COG1902	pentaerythritol trinitrate reductase activity
NYR47_RS30655	COG0667	Aldo Keto reductase
NYR47_RS30675	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NYR47_RS30695	COG1720	tRNA m6t6A37 methyltransferase activity
NYR47_RS30725	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
NYR47_RS30730	COG1522	sequence-specific DNA binding
NYR47_RS30755	COG1695	Transcriptional regulator
NYR47_RS30790	COG2002	toxin-antitoxin pair type II binding
NYR47_RS30860	COG0791	NLP P60 protein
NYR47_RS30860	COG3883	PFAM NLP P60 protein
NYR47_RS30995	COG1192	Involved in chromosome partitioning
NYR47_RS31085	COG1846	Transcriptional regulator
NYR47_RS31120	COG3757	hydrolase, family 25
NYR47_RS31120	COG3409	Peptidoglycan-binding domain 1 protein
NYR47_RS31185	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NYR47_RS31215	COG1136	(ABC) transporter
NYR47_RS31225	COG1192	Involved in chromosome partitioning
NYR47_RS31260	COG1396	sequence-specific DNA binding
NYR47_RS31500	COG4824	toxin secretion phage lysis holin