locus-tag	class	description
CFN60_RS00005	PF11638	DnaA N-terminal domain
CFN60_RS00005	PF08299	Bacterial dnaA protein helix-turn-helix
CFN60_RS00005	PF00308	Bacterial dnaA  protein
CFN60_RS00010	PF00712	DNA polymerase III beta subunit, N-terminal domain
CFN60_RS00010	PF02767	DNA polymerase III beta subunit, central domain
CFN60_RS00010	PF02768	DNA polymerase III beta subunit, C-terminal domain
CFN60_RS00020	PF02463	RecF/RecN/SMC N terminal domain
CFN60_RS00025	PF04025	Domain of unknown function (DUF370)
CFN60_RS00030	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS00030	PF01751	Toprim domain
CFN60_RS00030	PF00986	DNA gyrase B subunit, carboxyl terminus
CFN60_RS00030	PF00204	DNA gyrase B
CFN60_RS00035	PF03989	DNA gyrase C-terminal domain, beta-propeller
CFN60_RS00035	PF00521	DNA gyrase/topoisomerase IV, subunit A
CFN60_RS00065	PF14175	YaaC-like Protein
CFN60_RS00070	PF00478	IMP dehydrogenase / GMP reductase domain
CFN60_RS00070	PF00571	CBS domain
CFN60_RS00075	PF07943	Penicillin-binding protein 5, C-terminal domain
CFN60_RS00075	PF00768	D-alanyl-D-alanine carboxypeptidase
CFN60_RS00080	PF01680	SOR/SNZ family
CFN60_RS00085	PF01174	SNO glutamine amidotransferase family
CFN60_RS00090	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CFN60_RS00090	PF02403	Seryl-tRNA synthetase N-terminal domain
CFN60_RS00095	PF02595	Glycerate kinase family
CFN60_RS00105	PF01712	Deoxynucleoside kinase
CFN60_RS00110	PF01712	Deoxynucleoside kinase
CFN60_RS00115	PF00704	Glycosyl hydrolases family 18
CFN60_RS00115	PF01476	LysM domain
CFN60_RS00120	PF00857	Isochorismatase family
CFN60_RS00125	PF14437	MafB19-like deaminase
CFN60_RS00135	PF12169	DNA polymerase III subunits gamma and tau domain III
CFN60_RS00140	PF02575	YbaB/EbfC DNA-binding family
CFN60_RS00145	PF02132	RecR protein
CFN60_RS00145	PF13662	Toprim domain
CFN60_RS00150	PF10704	Protein of unknown function (DUF2508)
CFN60_RS00155	PF07441	SigmaK-factor processing regulatory protein BofA
CFN60_RS00185	PF10764	Inhibitor of sigma-G Gin
CFN60_RS00190	PF10112	5-bromo-4-chloroindolyl phosphate hydrolysis protein
CFN60_RS00195	PF05816	Toxic anion resistance protein (TelA)
CFN60_RS00200	PF01276	Orn/Lys/Arg decarboxylase, major domain
CFN60_RS00200	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
CFN60_RS00205	PF02223	Thymidylate kinase
CFN60_RS00210	PF06153	Cyclic-di-AMP receptor
CFN60_RS00215	PF03885	Protein of unknown function (DUF327)
CFN60_RS00220	PF09115	DNA polymerase III, delta subunit, C terminal
CFN60_RS00225	PF04468	PSP1 C-terminal conserved region
CFN60_RS00230	PF06156	Initiation control protein YabA
CFN60_RS00235	PF05175	Methyltransferase small domain
CFN60_RS00240	PF01541	GIY-YIG catalytic domain
CFN60_RS00245	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CFN60_RS00250	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
CFN60_RS00250	PF18277	AbrB C-terminal domain
CFN60_RS00255	PF08264	Anticodon-binding domain of tRNA
CFN60_RS00255	PF09334	tRNA synthetases class I (M)
CFN60_RS00255	PF01588	Putative tRNA binding domain
CFN60_RS00260	PF01026	TatD related DNase
CFN60_RS00265	PF07501	G5 domain
CFN60_RS00265	PF06725	3D domain
CFN60_RS00265	PF03990	G5-linked-Ubiquitin-like domain
CFN60_RS00270	PF13331	Domain of unknown function (DUF4093)
CFN60_RS00270	PF13662	Toprim domain
CFN60_RS00275	PF00398	Ribosomal RNA adenine dimethylase
CFN60_RS00280	PF05582	YabG peptidase U57
CFN60_RS00285	PF06257	Biofilm formation stimulator VEG
CFN60_RS00290	PF00269	Small, acid-soluble spore proteins, alpha/beta type
CFN60_RS00295	PF08544	GHMP kinases C terminal 
CFN60_RS00295	PF00288	GHMP kinases N terminal domain
CFN60_RS00300	PF00156	Phosphoribosyl transferase domain
CFN60_RS00300	PF09182	Bacterial purine repressor, N-terminal
CFN60_RS00305	PF01042	Endoribonuclease L-PSP
CFN60_RS00310	PF04026	SpoVG
CFN60_RS00315	PF00132	Bacterial transferase hexapeptide (six repeats)
CFN60_RS00315	PF00483	Nucleotidyl transferase
CFN60_RS00320	PF14572	Phosphoribosyl synthetase-associated domain
CFN60_RS00320	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
CFN60_RS00325	PF14693	Ribosomal protein TL5, C-terminal domain
CFN60_RS00325	PF01386	Ribosomal L25p family
CFN60_RS00330	PF01195	Peptidyl-tRNA hydrolase
CFN60_RS00335	PF10955	Protein of unknown function (DUF2757)
CFN60_RS00340	PF17757	UvrB interaction domain
CFN60_RS00340	PF03461	TRCF domain
CFN60_RS00340	PF00270	DEAD/DEAH box helicase
CFN60_RS00340	PF02559	CarD-like/TRCF domain
CFN60_RS00340	PF00271	Helicase conserved C-terminal domain
CFN60_RS00345	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
CFN60_RS00345	PF15714	Stage V sporulation protein T C-terminal, transcription factor
CFN60_RS00350	PF01943	Polysaccharide biosynthesis protein
CFN60_RS00350	PF14667	Polysaccharide biosynthesis C-terminal domain
CFN60_RS00355	PF03819	MazG nucleotide pyrophosphohydrolase domain
CFN60_RS00355	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CFN60_RS00360	PF01479	S4 domain
CFN60_RS00365	PF07873	YabP family
CFN60_RS00370	PF09578	Spore cortex protein YabQ (Spore_YabQ)
CFN60_RS00375	PF04977	Septum formation initiator
CFN60_RS00380	PF00575	S1 RNA binding domain
CFN60_RS00395	PF07228	Stage II sporulation protein E (SpoIIE)
CFN60_RS00400	PF00092	von Willebrand factor type A domain
CFN60_RS00405	PF00069	Protein kinase domain
CFN60_RS00410	PF01171	PP-loop family
CFN60_RS00410	PF11734	TilS substrate C-terminal domain
CFN60_RS00410	PF09179	TilS substrate binding domain
CFN60_RS00415	PF00156	Phosphoribosyl transferase domain
CFN60_RS00420	PF06480	FtsH Extracellular
CFN60_RS00420	PF17862	AAA+ lid domain
CFN60_RS00420	PF00004	ATPase family associated with various cellular activities (AAA)
CFN60_RS00420	PF01434	Peptidase family M41
CFN60_RS00425	PF03309	Type III pantothenate kinase
CFN60_RS00430	PF01430	Hsp33 protein
CFN60_RS00435	PF13145	PPIC-type PPIASE domain
CFN60_RS00440	PF00291	Pyridoxal-phosphate dependent enzyme
CFN60_RS00445	PF00425	chorismate binding enzyme
CFN60_RS00445	PF04715	Anthranilate synthase component I, N terminal region
CFN60_RS00450	PF00117	Glutamine amidotransferase class-I
CFN60_RS00455	PF01063	Amino-transferase class IV
CFN60_RS00460	PF00809	Pterin binding enzyme
CFN60_RS00465	PF02152	Dihydroneopterin aldolase
CFN60_RS00470	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
CFN60_RS00475	PF01381	Helix-turn-helix
CFN60_RS00480	PF01207	Dihydrouridine synthase (Dus)
CFN60_RS00485	PF00152	tRNA synthetases class II (D, K and N) 
CFN60_RS00485	PF01336	OB-fold nucleic acid binding domain
CFN60_RS00565	PF17727	CtsR C-terminal dimerization domain
CFN60_RS00565	PF05848	CtsR N-terminal HTH domain
CFN60_RS00570	PF02151	UvrB/uvrC motif
CFN60_RS00575	PF00217	ATP:guanido phosphotransferase, C-terminal catalytic domain
CFN60_RS00580	PF10431	C-terminal, D2-small domain, of ClpB protein 
CFN60_RS00580	PF02861	Clp amino terminal domain, pathogenicity island component
CFN60_RS00580	PF17871	AAA lid domain
CFN60_RS00580	PF00004	ATPase family associated with various cellular activities (AAA)
CFN60_RS00580	PF07724	AAA domain (Cdc48 subfamily)
CFN60_RS00585	PF18073	Rubredoxin metal binding domain
CFN60_RS00590	PF02457	DisA bacterial checkpoint controller nucleotide-binding
CFN60_RS00590	PF10635	DisA bacterial checkpoint controller linker region 
CFN60_RS00600	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
CFN60_RS00605	PF02542	YgbB family
CFN60_RS00610	PF00749	tRNA synthetases class I (E and Q), catalytic domain
CFN60_RS00615	PF00132	Bacterial transferase hexapeptide (six repeats)
CFN60_RS00615	PF06426	Serine acetyltransferase, N-terminal 
CFN60_RS00620	PF09190	DALR domain
CFN60_RS00620	PF01406	tRNA synthetases class I (C) catalytic domain
CFN60_RS00625	PF00636	Ribonuclease III domain
CFN60_RS00630	PF08032	RNA 2'-O ribose methyltransferase substrate binding
CFN60_RS00630	PF00588	SpoU rRNA Methylase family
CFN60_RS00635	PF05991	YacP-like NYN domain
CFN60_RS00640	PF08281	Sigma-70, region 4
CFN60_RS00640	PF04542	Sigma-70 region 2 
CFN60_RS00645	PF00471	Ribosomal protein L33
CFN60_RS00650	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
CFN60_RS00655	PF00467	KOW motif
CFN60_RS00655	PF02357	Transcription termination factor nusG
CFN60_RS00660	PF00298	Ribosomal protein L11, RNA binding domain
CFN60_RS00660	PF03946	Ribosomal protein L11, N-terminal domain
CFN60_RS00665	PF00687	Ribosomal protein L1p/L10e family
CFN60_RS00670	PF00466	Ribosomal protein L10
CFN60_RS00675	PF00542	Ribosomal protein L7/L12 C-terminal domain
CFN60_RS00675	PF16320	Ribosomal protein L7/L12 dimerisation domain
CFN60_RS00680	PF05175	Methyltransferase small domain
CFN60_RS00685	PF04560	RNA polymerase Rpb2, domain 7
CFN60_RS00685	PF00562	RNA polymerase Rpb2, domain 6
CFN60_RS00685	PF04563	RNA polymerase beta subunit
CFN60_RS00685	PF04561	RNA polymerase Rpb2, domain 2
CFN60_RS00685	PF10385	RNA polymerase beta subunit external 1 domain
CFN60_RS00685	PF04565	RNA polymerase Rpb2, domain 3
CFN60_RS00690	PF04998	RNA polymerase Rpb1, domain 5
CFN60_RS00690	PF04983	RNA polymerase Rpb1, domain 3
CFN60_RS00690	PF04997	RNA polymerase Rpb1, domain 1
CFN60_RS00690	PF00623	RNA polymerase Rpb1, domain 2
CFN60_RS00690	PF05000	RNA polymerase Rpb1, domain 4
CFN60_RS00695	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
CFN60_RS00700	PF00164	Ribosomal protein S12/S23
CFN60_RS00705	PF00177	Ribosomal protein S7p/S5e
CFN60_RS00710	PF00679	Elongation factor G C-terminus
CFN60_RS00710	PF00009	Elongation factor Tu GTP binding domain
CFN60_RS00710	PF03144	Elongation factor Tu domain 2
CFN60_RS00710	PF14492	Elongation Factor G, domain II
CFN60_RS00710	PF03764	Elongation factor G, domain IV
CFN60_RS00715	PF00009	Elongation factor Tu GTP binding domain
CFN60_RS00715	PF03143	Elongation factor Tu C-terminal domain
CFN60_RS00715	PF03144	Elongation factor Tu domain 2
CFN60_RS00720	PF12146	Serine aminopeptidase, S33
CFN60_RS00725	PF00338	Ribosomal protein S10p/S20e
CFN60_RS00730	PF00297	Ribosomal protein L3
CFN60_RS00735	PF00573	Ribosomal protein L4/L1 family
CFN60_RS00740	PF00276	Ribosomal protein L23
CFN60_RS00745	PF00181	Ribosomal Proteins L2, RNA binding domain
CFN60_RS00745	PF03947	Ribosomal Proteins L2, C-terminal domain
CFN60_RS00750	PF00203	Ribosomal protein S19
CFN60_RS00755	PF00237	Ribosomal protein L22p/L17e
CFN60_RS00760	PF07650	KH domain
CFN60_RS00760	PF00189	Ribosomal protein S3, C-terminal domain
CFN60_RS00765	PF00252	Ribosomal protein L16p/L10e
CFN60_RS00770	PF00831	Ribosomal L29 protein
CFN60_RS00775	PF00366	Ribosomal protein S17
CFN60_RS00780	PF00238	Ribosomal protein L14p/L23e
CFN60_RS00785	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
CFN60_RS00785	PF00467	KOW motif
CFN60_RS00790	PF00673	ribosomal L5P family C-terminus
CFN60_RS00790	PF00281	Ribosomal protein L5
CFN60_RS00795	PF00253	Ribosomal protein S14p/S29e
CFN60_RS00800	PF00410	Ribosomal protein S8
CFN60_RS00805	PF00347	Ribosomal protein L6
CFN60_RS00810	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
CFN60_RS00815	PF03719	Ribosomal protein S5, C-terminal domain
CFN60_RS00815	PF00333	Ribosomal protein S5, N-terminal domain
CFN60_RS00820	PF00327	Ribosomal protein L30p/L7e
CFN60_RS00825	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
CFN60_RS00830	PF00344	SecY translocase
CFN60_RS00835	PF05191	Adenylate kinase, active site lid
CFN60_RS00840	PF00557	Metallopeptidase family M24
CFN60_RS00845	PF01176	Translation initiation factor 1A / IF-1
CFN60_RS00850	PF00444	Ribosomal protein L36
CFN60_RS00855	PF00416	Ribosomal protein S13/S18
CFN60_RS00860	PF00411	Ribosomal protein S11
CFN60_RS00865	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
CFN60_RS00865	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
CFN60_RS00865	PF01000	RNA polymerase Rpb3/RpoA insert domain
CFN60_RS00870	PF01196	Ribosomal protein L17
CFN60_RS00875	PF00005	ABC transporter
CFN60_RS00880	PF00005	ABC transporter
CFN60_RS00885	PF02361	Cobalt transport protein
CFN60_RS00890	PF01416	tRNA pseudouridine synthase
CFN60_RS00895	PF00572	Ribosomal protein L13
CFN60_RS00900	PF00380	Ribosomal protein S9/S16
CFN60_RS00905	PF08241	Methyltransferase domain
CFN60_RS00910	PF05163	DinB family
CFN60_RS00915	PF10730	Protein of unknown function (DUF2521)
CFN60_RS00920	PF01520	N-acetylmuramoyl-L-alanine amidase
CFN60_RS00925	PF10609	NUBPL iron-transfer P-loop NTPase
CFN60_RS00930	PF17898	Spore germination GerD central core domain
CFN60_RS00935	PF14089	KinB-signalling pathway activation in sporulation
CFN60_RS00940	PF01522	Polysaccharide deacetylase
CFN60_RS01000	PF07690	Major Facilitator Superfamily
CFN60_RS01005	PF00202	Aminotransferase class-III
CFN60_RS01015	PF08240	Alcohol dehydrogenase GroES-like domain
CFN60_RS01015	PF00107	Zinc-binding dehydrogenase
CFN60_RS01020	PF00916	Sulfate permease family
CFN60_RS01020	PF01740	STAS domain
CFN60_RS01025	PF01758	Sodium Bile acid symporter family
CFN60_RS01035	PF01032	FecCD transport family
CFN60_RS01040	PF01032	FecCD transport family
CFN60_RS01045	PF01497	Periplasmic binding protein
CFN60_RS01050	PF01497	Periplasmic binding protein
CFN60_RS01050	PF12833	Helix-turn-helix domain
CFN60_RS01055	PF07075	Protein of unknown function (DUF1343)
CFN60_RS01060	PF00933	Glycosyl hydrolase family 3 N terminal domain
CFN60_RS01060	PF01915	Glycosyl hydrolase family 3 C-terminal domain
CFN60_RS01065	PF00144	Beta-lactamase
CFN60_RS01070	PF02378	Phosphotransferase system, EIIC 
CFN60_RS01070	PF00367	phosphotransferase system, EIIB
CFN60_RS01075	PF01380	SIS domain
CFN60_RS01085	PF04463	Protein of unknown function (DUF523)
CFN60_RS01115	PF04542	Sigma-70 region 2 
CFN60_RS01115	PF08281	Sigma-70, region 4
CFN60_RS01120	PF13490	Putative zinc-finger
CFN60_RS01125	PF02457	DisA bacterial checkpoint controller nucleotide-binding
CFN60_RS01130	PF07949	YbbR-like protein
CFN60_RS01135	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CFN60_RS01135	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CFN60_RS01135	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CFN60_RS01135	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CFN60_RS01140	PF01380	SIS domain
CFN60_RS01150	PF00005	ABC transporter
CFN60_RS01165	PF16226	Domain of unknown function (DUF4885)
CFN60_RS01170	PF00248	Aldo/keto reductase family
CFN60_RS01175	PF04172	LrgB-like family 
CFN60_RS01180	PF03788	LrgA family
CFN60_RS01185	PF01047	MarR family
CFN60_RS01190	PF00324	Amino acid permease
CFN60_RS01195	PF13419	Haloacid dehalogenase-like hydrolase
CFN60_RS01200	PF07730	Histidine kinase
CFN60_RS01205	PF00196	Bacterial regulatory proteins, luxR family
CFN60_RS01205	PF00072	Response regulator receiver domain
CFN60_RS01210	PF00005	ABC transporter
CFN60_RS01235	PF17334	Minor curli fiber component A
CFN60_RS01250	PF13520	Amino acid permease
CFN60_RS01265	PF10852	Protein of unknown function (DUF2651)   
CFN60_RS01270	PF03009	Glycerophosphoryl diester phosphodiesterase family
CFN60_RS01275	PF07690	Major Facilitator Superfamily
CFN60_RS01285	PF10852	Protein of unknown function (DUF2651)   
CFN60_RS01290	PF03241	4-hydroxyphenylacetate 3-hydroxylase C terminal
CFN60_RS01290	PF11794	4-hydroxyphenylacetate 3-hydroxylase N terminal
CFN60_RS01300	PF08924	Domain of unknown function (DUF1906)
CFN60_RS01300	PF01471	Putative peptidoglycan binding domain
CFN60_RS01315	PF00465	Iron-containing alcohol dehydrogenase 
CFN60_RS01320	PF02222	ATP-grasp domain
CFN60_RS01325	PF01066	CDP-alcohol phosphatidyltransferase
CFN60_RS01330	PF09335	SNARE associated Golgi protein
CFN60_RS01335	PF02666	Phosphatidylserine decarboxylase
CFN60_RS01345	PF17773	UPF0176 acylphosphatase like domain
CFN60_RS01345	PF12368	Rhodanase C-terminal
CFN60_RS01345	PF00581	Rhodanese-like domain
CFN60_RS01350	PF00375	Sodium:dicarboxylate symporter family
CFN60_RS01355	PF01063	Amino-transferase class IV
CFN60_RS01360	PF00324	Amino acid permease
CFN60_RS01365	PF02574	Homocysteine S-methyltransferase
CFN60_RS01370	PF01235	Sodium:alanine symporter family
CFN60_RS01375	PF04960	Glutaminase
CFN60_RS01380	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS01385	PF08664	YcbB domain
CFN60_RS01385	PF00072	Response regulator receiver domain
CFN60_RS01390	PF01636	Phosphotransferase enzyme family
CFN60_RS01395	PF15777	Tryptophan RNA-binding attenuator protein inhibitory protein
CFN60_RS01400	PF10710	Protein of unknown function (DUF2512)
CFN60_RS01410	PF07486	Cell Wall Hydrolase
CFN60_RS01420	PF16655	PhoD-like phosphatase, N-terminal domain
CFN60_RS01420	PF09423	PhoD-like phosphatase
CFN60_RS01425	PF02416	mttA/Hcf106 family
CFN60_RS01430	PF00902	Sec-independent protein translocase protein (TatC)
CFN60_RS01435	PF01470	Pyroglutamyl peptidase
CFN60_RS01440	PF00266	Aminotransferase class-V
CFN60_RS01445	PF07690	Major Facilitator Superfamily
CFN60_RS01450	PF00440	Bacterial regulatory proteins, tetR family
CFN60_RS01455	PF00710	Asparaginase, N-terminal
CFN60_RS01455	PF17763	Glutaminase/Asparaginase C-terminal domain
CFN60_RS01460	PF01674	Lipase (class 2)
CFN60_RS01465	PF05225	helix-turn-helix, Psq domain
CFN60_RS01465	PF02810	SEC-C motif
CFN60_RS01470	PF00248	Aldo/keto reductase family
CFN60_RS01475	PF11611	Domain of unknown function (DUF4352)
CFN60_RS01475	PF17118	Domain of unknown function (DUF5105)
CFN60_RS01480	PF16244	Domain of unknown function (DUF4901)
CFN60_RS01485	PF16244	Domain of unknown function (DUF4901)
CFN60_RS01490	PF13539	D-alanyl-D-alanine carboxypeptidase
CFN60_RS01495	PF18801	response regulator aspartate phosphatase H, N terminal
CFN60_RS01510	PF00128	Alpha amylase, catalytic domain
CFN60_RS01515	PF01297	Zinc-uptake complex component A periplasmic
CFN60_RS01520	PF00005	ABC transporter
CFN60_RS01525	PF00950	ABC 3 transport family
CFN60_RS01530	PF00296	Luciferase-like monooxygenase
CFN60_RS01535	PF02342	TerD domain
CFN60_RS01540	PF02342	TerD domain
CFN60_RS01545	PF02342	TerD domain
CFN60_RS01550	PF03741	Integral membrane protein TerC family
CFN60_RS01555	PF14266	Putative component of 'biosynthetic module'
CFN60_RS01560	PF05816	Toxic anion resistance protein (TelA)
CFN60_RS01565	PF07690	Major Facilitator Superfamily
CFN60_RS01570	PF00571	CBS domain
CFN60_RS01570	PF00005	ABC transporter
CFN60_RS01575	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS01580	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
CFN60_RS01585	PF07687	Peptidase dimerisation domain
CFN60_RS01585	PF01546	Peptidase family M20/M25/M40
CFN60_RS01590	PF03606	C4-dicarboxylate anaerobic carrier
CFN60_RS01600	PF16738	Starch-binding module 26
CFN60_RS01600	PF00128	Alpha amylase, catalytic domain
CFN60_RS01605	PF00056	lactate/malate dehydrogenase, NAD binding domain
CFN60_RS01605	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CFN60_RS01610	PF07690	Major Facilitator Superfamily
CFN60_RS01615	PF01047	MarR family
CFN60_RS01620	PF01810	LysE type translocator
CFN60_RS01625	PF08892	YqcI/YcgG family
CFN60_RS01630	PF00324	Amino acid permease
CFN60_RS01635	PF09347	Domain of unknown function (DUF1989)
CFN60_RS01640	PF02540	NAD synthase
CFN60_RS01645	PF12197	Bacillus cereus group antimicrobial protein
CFN60_RS01660	PF07690	Major Facilitator Superfamily
CFN60_RS01665	PF01202	Shikimate kinase
CFN60_RS01670	PF08241	Methyltransferase domain
CFN60_RS01675	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CFN60_RS01675	PF03466	LysR substrate binding domain
CFN60_RS01680	PF05448	Acetyl xylan esterase (AXE1)
CFN60_RS01685	PF10127	RNA repair pathway DNA polymerase beta family
CFN60_RS01690	PF01619	Proline dehydrogenase
CFN60_RS01695	PF00171	Aldehyde dehydrogenase family
CFN60_RS01700	PF00474	Sodium:solute symporter family
CFN60_RS01705	PF13556	PucR C-terminal helix-turn-helix domain
CFN60_RS01705	PF17853	GGDEF-like domain
CFN60_RS01710	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFN60_RS01715	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CFN60_RS01720	PF00355	Rieske [2Fe-2S] domain
CFN60_RS01725	PF04324	BFD-like [2Fe-2S] binding domain
CFN60_RS01725	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
CFN60_RS01725	PF18267	Rubredoxin NAD+ reductase C-terminal domain
CFN60_RS01725	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
CFN60_RS01725	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFN60_RS01730	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CFN60_RS01730	PF00384	Molybdopterin oxidoreductase
CFN60_RS01730	PF01568	Molydopterin dinucleotide binding domain
CFN60_RS01735	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFN60_RS01735	PF04324	BFD-like [2Fe-2S] binding domain
CFN60_RS01735	PF18267	Rubredoxin NAD+ reductase C-terminal domain
CFN60_RS01735	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
CFN60_RS01740	PF07690	Major Facilitator Superfamily
CFN60_RS01745	PF02492	CobW/HypB/UreG, nucleotide-binding domain
CFN60_RS01745	PF07683	Cobalamin synthesis protein cobW C-terminal domain
CFN60_RS01750	PF00107	Zinc-binding dehydrogenase
CFN60_RS01750	PF13823	Alcohol dehydrogenase GroES-associated
CFN60_RS01750	PF08240	Alcohol dehydrogenase GroES-like domain
CFN60_RS01755	PF06271	RDD family
CFN60_RS01760	PF10925	Protein of unknown function (DUF2680)
CFN60_RS01765	PF00232	Glycosyl hydrolase family 1
CFN60_RS01770	PF11033	Competence protein J (ComJ)
CFN60_RS01775	PF14040	Deoxyribonuclease NucA/NucB
CFN60_RS01780	PF01380	SIS domain
CFN60_RS01785	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
CFN60_RS01790	PF01638	HxlR-like helix-turn-helix
CFN60_RS01800	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS01800	PF00501	AMP-binding enzyme
CFN60_RS01800	PF00550	Phosphopantetheine attachment site
CFN60_RS01800	PF00668	Condensation domain
CFN60_RS01805	PF00501	AMP-binding enzyme
CFN60_RS01805	PF00668	Condensation domain
CFN60_RS01805	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS01805	PF00550	Phosphopantetheine attachment site
CFN60_RS01810	PF00975	Thioesterase domain
CFN60_RS01810	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS01810	PF00550	Phosphopantetheine attachment site
CFN60_RS01810	PF00501	AMP-binding enzyme
CFN60_RS01810	PF00668	Condensation domain
CFN60_RS01815	PF00975	Thioesterase domain
CFN60_RS01820	PF07685	CobB/CobQ-like glutamine amidotransferase domain
CFN60_RS01820	PF00155	Aminotransferase class I and II
CFN60_RS01820	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
CFN60_RS01825	PF01648	4'-phosphopantetheinyl transferase superfamily
CFN60_RS01835	PF00005	ABC transporter
CFN60_RS01840	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS01845	PF00497	Bacterial extracellular solute-binding proteins, family 3
CFN60_RS01850	PF03466	LysR substrate binding domain
CFN60_RS01850	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CFN60_RS01855	PF02441	Flavoprotein
CFN60_RS01860	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
CFN60_RS01875	PF00854	POT family
CFN60_RS01880	PF12708	Pectate lyase superfamily protein
CFN60_RS01880	PF13229	Right handed beta helix region
CFN60_RS01890	PF03323	Bacillus/Clostridium GerA spore germination protein
CFN60_RS01895	PF05504	Spore germination B3/ GerAC like, C-terminal 
CFN60_RS01900	PF03845	Spore germination protein
CFN60_RS01905	PF00296	Luciferase-like monooxygenase
CFN60_RS01910	PF00583	Acetyltransferase (GNAT) family
CFN60_RS01915	PF00497	Bacterial extracellular solute-binding proteins, family 3
CFN60_RS01920	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS01925	PF00005	ABC transporter
CFN60_RS01930	PF07687	Peptidase dimerisation domain
CFN60_RS01930	PF01546	Peptidase family M20/M25/M40
CFN60_RS01935	PF03972	MmgE/PrpD family
CFN60_RS01940	PF00005	ABC transporter
CFN60_RS01945	PF12704	MacB-like periplasmic core domain
CFN60_RS01945	PF02687	FtsX-like permease family
CFN60_RS01950	PF00486	Transcriptional regulatory protein, C terminal
CFN60_RS01950	PF00072	Response regulator receiver domain
CFN60_RS01955	PF00512	His Kinase A (phospho-acceptor) domain
CFN60_RS01955	PF00672	HAMP domain
CFN60_RS01955	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS01960	PF18801	response regulator aspartate phosphatase H, N terminal
CFN60_RS01965	PF11131	Rap-phr extracellular signalling
CFN60_RS01970	PF09680	Family of unknown function
CFN60_RS01975	PF00696	Amino acid kinase family
CFN60_RS01975	PF13840	ACT domain 
CFN60_RS01980	PF01032	FecCD transport family
CFN60_RS01985	PF01032	FecCD transport family
CFN60_RS01990	PF00005	ABC transporter
CFN60_RS01995	PF01497	Periplasmic binding protein
CFN60_RS02000	PF07690	Major Facilitator Superfamily
CFN60_RS02005	PF00440	Bacterial regulatory proteins, tetR family
CFN60_RS02010	PF00881	Nitroreductase family
CFN60_RS02015	PF03992	Antibiotic biosynthesis monooxygenase
CFN60_RS02020	PF01022	Bacterial regulatory protein, arsR family
CFN60_RS02025	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS02025	PF00155	Aminotransferase class I and II
CFN60_RS02030	PF00202	Aminotransferase class-III
CFN60_RS02035	PF00171	Aldehyde dehydrogenase family
CFN60_RS02040	PF06800	Sugar transport protein
CFN60_RS02050	PF07987	Domain of unkown function (DUF1775)
CFN60_RS02055	PF05425	Copper resistance protein D
CFN60_RS02055	PF04234	CopC domain
CFN60_RS02055	PF13115	YtkA-like
CFN60_RS02060	PF08220	DeoR-like helix-turn-helix domain
CFN60_RS02060	PF05573	NosL
CFN60_RS02070	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CFN60_RS02070	PF02378	Phosphotransferase system, EIIC 
CFN60_RS02075	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CFN60_RS02080	PF01232	Mannitol dehydrogenase Rossmann domain
CFN60_RS02080	PF08125	Mannitol dehydrogenase C-terminal domain
CFN60_RS02085	PF07977	FabA-like domain
CFN60_RS02100	PF03746	LamB/YcsF family
CFN60_RS02105	PF01566	Natural resistance-associated macrophage protein
CFN60_RS02110	PF07286	Protein of unknown function (DUF1445)
CFN60_RS02115	PF02682	Carboxyltransferase domain, subdomain C and D
CFN60_RS02120	PF02626	Carboxyltransferase domain, subdomain A and B 
CFN60_RS02125	PF09339	IclR helix-turn-helix domain
CFN60_RS02125	PF01614	Bacterial transcriptional regulator
CFN60_RS02130	PF13472	GDSL-like Lipase/Acylhydrolase family
CFN60_RS02135	PF13129	Protein of unknown function (DUF3953)
CFN60_RS02140	PF03992	Antibiotic biosynthesis monooxygenase
CFN60_RS02145	PF05223	NTF2-like N-terminal transpeptidase domain
CFN60_RS02145	PF00905	Penicillin binding protein transpeptidase domain
CFN60_RS02145	PF03717	Penicillin-binding Protein dimerisation domain
CFN60_RS02150	PF00248	Aldo/keto reductase family
CFN60_RS02155	PF08279	HTH domain
CFN60_RS02155	PF00874	PRD domain
CFN60_RS02155	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CFN60_RS02155	PF05043	Mga helix-turn-helix domain
CFN60_RS02155	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CFN60_RS02160	PF00501	AMP-binding enzyme
CFN60_RS02160	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS02175	PF13302	Acetyltransferase (GNAT) domain
CFN60_RS02180	PF16242	Pyridoxamine 5'-phosphate oxidase like
CFN60_RS02185	PF10997	Alternate to MurJ
CFN60_RS02190	PF12823	Domain of unknown function (DUF3817)
CFN60_RS02195	PF01037	Lrp/AsnC ligand binding domain
CFN60_RS02200	PF01131	DNA topoisomerase
CFN60_RS02200	PF01751	Toprim domain
CFN60_RS02210	PF00990	Diguanylate cyclase, GGDEF domain
CFN60_RS02215	PF10096	Uncharacterized protein conserved in bacteria (DUF2334)
CFN60_RS02225	PF03170	Bacterial cellulose synthase subunit
CFN60_RS02230	PF13520	Amino acid permease
CFN60_RS02235	PF00293	NUDIX domain
CFN60_RS02240	PF00205	Thiamine pyrophosphate enzyme, central domain
CFN60_RS02240	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CFN60_RS02240	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CFN60_RS02245	PF01510	N-acetylmuramoyl-L-alanine amidase
CFN60_RS02245	PF01476	LysM domain
CFN60_RS02245	PF01471	Putative peptidoglycan binding domain
CFN60_RS02260	PF09346	SMI1 / KNR4 family (SUKH-1)
CFN60_RS02300	PF01566	Natural resistance-associated macrophage protein
CFN60_RS02315	PF09954	Uncharacterized protein conserved in bacteria (DUF2188)
CFN60_RS02320	PF17314	Family of unknown function (DUF5360)
CFN60_RS02325	PF00893	Small Multidrug Resistance protein
CFN60_RS02330	PF12787	EcsC protein family
CFN60_RS02335	PF10685	Stress-induced bacterial acidophilic repeat motif
CFN60_RS02335	PF00477	Small hydrophilic plant seed protein
CFN60_RS02340	PF07883	Cupin domain
CFN60_RS02345	PF16291	Domain of unknown function (DUF4937
CFN60_RS02350	PF05067	Manganese containing catalase
CFN60_RS02355	PF03480	Bacterial extracellular solute-binding protein, family 7
CFN60_RS02360	PF17203	Single cache domain 3
CFN60_RS02360	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS02360	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
CFN60_RS02365	PF00072	Response regulator receiver domain
CFN60_RS02365	PF08279	HTH domain
CFN60_RS02370	PF00375	Sodium:dicarboxylate symporter family
CFN60_RS02375	PF01594	AI-2E family transporter
CFN60_RS02380	PF00005	ABC transporter
CFN60_RS02395	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
CFN60_RS02395	PF02770	Acyl-CoA dehydrogenase, middle domain
CFN60_RS02395	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
CFN60_RS02400	PF13040	Fur-regulated basic protein B
CFN60_RS02410	PF01545	Cation efflux family
CFN60_RS02410	PF16916	Dimerisation domain of Zinc Transporter
CFN60_RS02415	PF00085	Thioredoxin
CFN60_RS02420	PF01820	D-ala D-ala ligase N-terminus
CFN60_RS02420	PF07478	D-ala D-ala ligase C-terminus
CFN60_RS02425	PF01225	Mur ligase family, catalytic domain
CFN60_RS02425	PF02875	Mur ligase family, glutamate ligase domain
CFN60_RS02425	PF08245	Mur ligase middle domain
CFN60_RS02430	PF00270	DEAD/DEAH box helicase
CFN60_RS02430	PF00271	Helicase conserved C-terminal domain
CFN60_RS02435	PF03703	Bacterial PH domain
CFN60_RS02440	PF03703	Bacterial PH domain
CFN60_RS02445	PF01694	Rhomboid family
CFN60_RS02450	PF01648	4'-phosphopantetheinyl transferase superfamily
CFN60_RS02460	PF01168	Alanine racemase, N-terminal domain
CFN60_RS02460	PF00842	Alanine racemase, C-terminal domain
CFN60_RS02465	PF01402	Ribbon-helix-helix protein, copG family
CFN60_RS02470	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system
CFN60_RS02475	PF08678	Rsbr N terminal
CFN60_RS02475	PF01740	STAS domain
CFN60_RS02480	PF01740	STAS domain
CFN60_RS02485	PF13581	Histidine kinase-like ATPase domain
CFN60_RS02490	PF08673	Phosphoserine phosphatase RsbU, N-terminal domain
CFN60_RS02490	PF07228	Stage II sporulation protein E (SpoIIE)
CFN60_RS02495	PF01740	STAS domain
CFN60_RS02500	PF13581	Histidine kinase-like ATPase domain
CFN60_RS02505	PF04542	Sigma-70 region 2 
CFN60_RS02505	PF04545	Sigma-70, region 4
CFN60_RS02505	PF04539	Sigma-70 region 3
CFN60_RS02510	PF07228	Stage II sporulation protein E (SpoIIE)
CFN60_RS02515	PF00575	S1 RNA binding domain
CFN60_RS02515	PF09371	Tex-like protein N-terminal domain
CFN60_RS02515	PF16921	Tex protein YqgF-like domain
CFN60_RS02515	PF17674	HHH domain
CFN60_RS02525	PF10263	SprT-like family
CFN60_RS02565	PF18801	response regulator aspartate phosphatase H, N terminal
CFN60_RS02570	PF02028	BCCT, betaine/carnitine/choline family transporter
CFN60_RS02575	PF07690	Major Facilitator Superfamily
CFN60_RS02585	PF14729	Domain of unknown function with cystatin-like fold (DUF4467) 
CFN60_RS02590	PF01575	MaoC like domain
CFN60_RS02605	PF02082	Transcriptional regulator
CFN60_RS02610	PF13460	NAD(P)H-binding 
CFN60_RS02620	PF00440	Bacterial regulatory proteins, tetR family
CFN60_RS02625	PF00487	Fatty acid desaturase
CFN60_RS02635	PF00313	'Cold-shock' DNA-binding domain
CFN60_RS02640	PF02559	CarD-like/TRCF domain
CFN60_RS02645	PF02583	Metal-sensitive transcriptional repressor
CFN60_RS02650	PF13686	DsrE/DsrF/DrsH-like family
CFN60_RS02655	PF12368	Rhodanase C-terminal
CFN60_RS02655	PF00581	Rhodanese-like domain
CFN60_RS02655	PF17773	UPF0176 acylphosphatase like domain
CFN60_RS02660	PF01206	Sulfurtransferase TusA
CFN60_RS02660	PF00581	Rhodanese-like domain
CFN60_RS02670	PF01206	Sulfurtransferase TusA
CFN60_RS02675	PF01925	Sulfite exporter TauE/SafE
CFN60_RS02680	PF01177	Asp/Glu/Hydantoin racemase
CFN60_RS02695	PF01734	Patatin-like phospholipase
CFN60_RS02705	PF00291	Pyridoxal-phosphate dependent enzyme
CFN60_RS02710	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS02710	PF07729	FCD domain
CFN60_RS02715	PF01042	Endoribonuclease L-PSP
CFN60_RS02725	PF07687	Peptidase dimerisation domain
CFN60_RS02725	PF01546	Peptidase family M20/M25/M40
CFN60_RS02730	PF02311	AraC-like ligand binding domain
CFN60_RS02730	PF12833	Helix-turn-helix domain
CFN60_RS02735	PF01546	Peptidase family M20/M25/M40
CFN60_RS02735	PF07687	Peptidase dimerisation domain
CFN60_RS02740	PF00155	Aminotransferase class I and II
CFN60_RS02740	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS02745	PF07690	Major Facilitator Superfamily
CFN60_RS02750	PF00293	NUDIX domain
CFN60_RS02750	PF13344	Haloacid dehalogenase-like hydrolase
CFN60_RS02765	PF01565	FAD binding domain 
CFN60_RS02765	PF08031	Berberine and berberine like 
CFN60_RS02775	PF01545	Cation efflux family
CFN60_RS02775	PF16916	Dimerisation domain of Zinc Transporter
CFN60_RS02790	PF07883	Cupin domain
CFN60_RS02795	PF12867	DinB superfamily
CFN60_RS02800	PF00701	Dihydrodipicolinate synthetase family
CFN60_RS02810	PF04055	Radical SAM superfamily
CFN60_RS02825	PF00107	Zinc-binding dehydrogenase
CFN60_RS02825	PF08240	Alcohol dehydrogenase GroES-like domain
CFN60_RS02830	PF13411	MerR HTH family regulatory protein
CFN60_RS02840	PF00155	Aminotransferase class I and II
CFN60_RS02840	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS02855	PF07690	Major Facilitator Superfamily
CFN60_RS02860	PF16859	Tetracyclin repressor-like, C-terminal domain
CFN60_RS02860	PF00440	Bacterial regulatory proteins, tetR family
CFN60_RS02865	PF00892	EamA-like transporter family
CFN60_RS02870	PF00155	Aminotransferase class I and II
CFN60_RS02870	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS02875	PF07875	Coat F domain
CFN60_RS02885	PF08240	Alcohol dehydrogenase GroES-like domain
CFN60_RS02885	PF13823	Alcohol dehydrogenase GroES-associated
CFN60_RS02885	PF00107	Zinc-binding dehydrogenase
CFN60_RS02890	PF07875	Coat F domain
CFN60_RS02900	PF07690	Major Facilitator Superfamily
CFN60_RS02915	PF12804	MobA-like NTP transferase domain
CFN60_RS02915	PF00132	Bacterial transferase hexapeptide (six repeats)
CFN60_RS02920	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS02920	PF07730	Histidine kinase
CFN60_RS02925	PF00196	Bacterial regulatory proteins, luxR family
CFN60_RS02925	PF00072	Response regulator receiver domain
CFN60_RS02930	PF03176	MMPL family
CFN60_RS02935	PF07722	Peptidase C26
CFN60_RS02940	PF00005	ABC transporter
CFN60_RS02940	PF12848	ABC transporter
CFN60_RS02945	PF13302	Acetyltransferase (GNAT) domain
CFN60_RS02950	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CFN60_RS02950	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CFN60_RS02955	PF00465	Iron-containing alcohol dehydrogenase 
CFN60_RS02960	PF07690	Major Facilitator Superfamily
CFN60_RS02965	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS02965	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS02975	PF01925	Sulfite exporter TauE/SafE
CFN60_RS02980	PF00583	Acetyltransferase (GNAT) family
CFN60_RS02985	PF06445	GyrI-like small molecule binding domain
CFN60_RS02985	PF13411	MerR HTH family regulatory protein
CFN60_RS02990	PF00892	EamA-like transporter family
CFN60_RS02995	PF00293	NUDIX domain
CFN60_RS03000	PF08241	Methyltransferase domain
CFN60_RS03005	PF00180	Isocitrate/isopropylmalate dehydrogenase
CFN60_RS03010	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS03010	PF07729	FCD domain
CFN60_RS03015	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
CFN60_RS03030	PF11954	Domain of unknown function (DUF3471)
CFN60_RS03030	PF00144	Beta-lactamase
CFN60_RS03035	PF07563	Protein of unknown function (DUF1541)
CFN60_RS03040	PF07690	Major Facilitator Superfamily
CFN60_RS03045	PF07702	UTRA domain
CFN60_RS03045	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS03050	PF07729	FCD domain
CFN60_RS03050	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS03055	PF07690	Major Facilitator Superfamily
CFN60_RS03060	PF00893	Small Multidrug Resistance protein
CFN60_RS03065	PF00893	Small Multidrug Resistance protein
CFN60_RS03070	PF17934	Tetracyclin repressor-like, C-terminal domain
CFN60_RS03070	PF00440	Bacterial regulatory proteins, tetR family
CFN60_RS03075	PF13520	Amino acid permease
CFN60_RS03085	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
CFN60_RS03090	PF00107	Zinc-binding dehydrogenase
CFN60_RS03090	PF08240	Alcohol dehydrogenase GroES-like domain
CFN60_RS03095	PF00083	Sugar (and other) transporter
CFN60_RS03135	PF00586	AIR synthase related protein, N-terminal domain
CFN60_RS03135	PF02769	AIR synthase related protein, C-terminal domain
CFN60_RS03140	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
CFN60_RS03145	PF00814	Glycoprotease family
CFN60_RS03150	PF00583	Acetyltransferase (GNAT) family
CFN60_RS03155	PF00814	Glycoprotease family
CFN60_RS03160	PF12848	ABC transporter
CFN60_RS03160	PF16326	ABC transporter C-terminal domain
CFN60_RS03160	PF00005	ABC transporter
CFN60_RS03165	PF01967	MoaC family
CFN60_RS03170	PF02629	CoA binding domain
CFN60_RS03170	PF06971	Putative DNA-binding protein N-terminus
CFN60_RS03175	PF02416	mttA/Hcf106 family
CFN60_RS03180	PF00902	Sec-independent protein translocase protein (TatC)
CFN60_RS03185	PF14146	Domain of unknown function (DUF4305)
CFN60_RS03190	PF02517	CPBP intramembrane metalloprotease
CFN60_RS03195	PF00166	Chaperonin 10 Kd subunit
CFN60_RS03200	PF00118	TCP-1/cpn60 chaperonin family
CFN60_RS03205	PF01471	Putative peptidoglycan binding domain
CFN60_RS03205	PF08924	Domain of unknown function (DUF1906)
CFN60_RS03225	PF00931	NB-ARC domain
CFN60_RS03225	PF13176	Tetratricopeptide repeat
CFN60_RS03230	PF08240	Alcohol dehydrogenase GroES-like domain
CFN60_RS03230	PF00107	Zinc-binding dehydrogenase
CFN60_RS03240	PF00294	pfkB family carbohydrate kinase
CFN60_RS03245	PF14154	Domain of unknown function (DUF4306)
CFN60_RS03250	PF04012	PspA/IM30 family
CFN60_RS03255	PF08271	TFIIB zinc-binding
CFN60_RS03260	PF04536	TPM domain
CFN60_RS03265	PF13421	SPFH domain-Band 7 family
CFN60_RS03270	PF01757	Acyltransferase family
CFN60_RS03275	PF11738	Protein of unknown function (DUF3298)
CFN60_RS03275	PF13739	Deacetylase PdaC
CFN60_RS03280	PF08281	Sigma-70, region 4
CFN60_RS03280	PF04542	Sigma-70 region 2 
CFN60_RS03285	PF00107	Zinc-binding dehydrogenase
CFN60_RS03285	PF08240	Alcohol dehydrogenase GroES-like domain
CFN60_RS03290	PF03330	Lytic transglycolase
CFN60_RS03295	PF07676	WD40-like Beta Propeller Repeat
CFN60_RS03300	PF14169	Cold-inducible protein YdjO
CFN60_RS03305	PF00394	Multicopper oxidase
CFN60_RS03305	PF07731	Multicopper oxidase
CFN60_RS03305	PF07732	Multicopper oxidase
CFN60_RS03310	PF00324	Amino acid permease
CFN60_RS03315	PF01545	Cation efflux family
CFN60_RS03315	PF16916	Dimerisation domain of Zinc Transporter
CFN60_RS03320	PF17863	AAA lid domain
CFN60_RS03320	PF07726	ATPase family associated with various cellular activities (AAA)
CFN60_RS03325	PF01882	Protein of unknown function DUF58
CFN60_RS03330	PF01841	Transglutaminase-like superfamily
CFN60_RS03330	PF13559	Domain of unknown function (DUF4129)
CFN60_RS03330	PF11992	Domain of unknown function (DUF3488)
CFN60_RS03335	PF00117	Glutamine amidotransferase class-I
CFN60_RS03335	PF00958	GMP synthase C terminal domain
CFN60_RS03335	PF02540	NAD synthase
CFN60_RS03340	PF02142	MGS-like domain
CFN60_RS03340	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CFN60_RS03340	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CFN60_RS03345	PF00206	Lyase
CFN60_RS03345	PF02655	ATP-grasp domain
CFN60_RS03355	PF00155	Aminotransferase class I and II
CFN60_RS03360	PF07690	Major Facilitator Superfamily
CFN60_RS03365	PF04545	Sigma-70, region 4
CFN60_RS03365	PF04542	Sigma-70 region 2 
CFN60_RS03375	PF00860	Permease family
CFN60_RS03385	PF13076	Fur-regulated basic protein A
CFN60_RS03390	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CFN60_RS03395	PF14044	NETI protein
CFN60_RS03400	PF00731	AIR carboxylase
CFN60_RS03405	PF02222	ATP-grasp domain
CFN60_RS03405	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
CFN60_RS03410	PF10397	Adenylosuccinate lyase C-terminus
CFN60_RS03410	PF00206	Lyase
CFN60_RS03415	PF01259	SAICAR synthetase
CFN60_RS03420	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
CFN60_RS03430	PF00586	AIR synthase related protein, N-terminal domain
CFN60_RS03430	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
CFN60_RS03430	PF02769	AIR synthase related protein, C-terminal domain
CFN60_RS03435	PF00156	Phosphoribosyl transferase domain
CFN60_RS03440	PF00586	AIR synthase related protein, N-terminal domain
CFN60_RS03440	PF02769	AIR synthase related protein, C-terminal domain
CFN60_RS03445	PF00551	Formyl transferase
CFN60_RS03450	PF02142	MGS-like domain
CFN60_RS03450	PF01808	AICARFT/IMPCHase bienzyme
CFN60_RS03455	PF02844	Phosphoribosylglycinamide synthetase, N domain
CFN60_RS03455	PF02843	Phosphoribosylglycinamide synthetase, C domain
CFN60_RS03455	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
CFN60_RS03460	PF11127	Protein of unknown function (DUF2892)
CFN60_RS03465	PF01979	Amidohydrolase family
CFN60_RS03465	PF13382	Adenine deaminase C-terminal domain
CFN60_RS03470	PF17479	Protein of unknown function (DUF3048) C-terminal domain
CFN60_RS03470	PF11258	Protein of unknown function (DUF3048) N-terminal domain
CFN60_RS03475	PF01371	Trp repressor protein
CFN60_RS03480	PF01645	Conserved region in glutamate synthase
CFN60_RS03490	PF01884	PcrB family
CFN60_RS03495	PF00580	UvrD/REP helicase N-terminal domain
CFN60_RS03495	PF13361	UvrD-like helicase C-terminal domain
CFN60_RS03500	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
CFN60_RS03500	PF00533	BRCA1 C Terminus (BRCT) domain
CFN60_RS03500	PF01653	NAD-dependent DNA ligase adenylation domain
CFN60_RS03500	PF12826	Helix-hairpin-helix motif
CFN60_RS03500	PF03120	NAD-dependent DNA ligase OB-fold domain
CFN60_RS03505	PF07537	CamS sex pheromone cAM373 precursor
CFN60_RS03510	PF01636	Phosphotransferase enzyme family
CFN60_RS03515	PF02308	MgtC family
CFN60_RS03520	PF00474	Sodium:solute symporter family
CFN60_RS03525	PF02686	Glu-tRNAGln amidotransferase C subunit
CFN60_RS03530	PF01425	Amidase
CFN60_RS03535	PF02637	GatB domain
CFN60_RS03535	PF02934	GatB/GatE catalytic domain
CFN60_RS03540	PF00440	Bacterial regulatory proteins, tetR family
CFN60_RS03545	PF00873	AcrB/AcrD/AcrF family
CFN60_RS03550	PF00781	Diacylglycerol kinase catalytic domain
CFN60_RS03555	PF01938	TRAM domain
CFN60_RS03555	PF05958	tRNA (Uracil-5-)-methyltransferase
CFN60_RS03590	PF04634	Protein of unknown function, DUF600
CFN60_RS03595	PF04634	Protein of unknown function, DUF600
CFN60_RS03600	PF04634	Protein of unknown function, DUF600
CFN60_RS03620	PF18593	CdiI immunity protein
CFN60_RS03625	PF04740	LXG domain of WXG superfamily
CFN60_RS03625	PF14411	A nuclease of the HNH/ENDO VII superfamily with conserved LHH
CFN60_RS03630	PF01709	Transcriptional regulator
CFN60_RS03640	PF04439	Streptomycin adenylyltransferase
CFN60_RS03645	PF11007	Spore coat associated protein JA (CotJA)
CFN60_RS03650	PF12652	CotJB protein
CFN60_RS03655	PF05067	Manganese containing catalase
CFN60_RS03660	PF00583	Acetyltransferase (GNAT) family
CFN60_RS03670	PF04239	Protein of unknown function (DUF421)
CFN60_RS03675	PF03992	Antibiotic biosynthesis monooxygenase
CFN60_RS03690	PF01740	STAS domain
CFN60_RS03690	PF14361	RsbT co-antagonist protein rsbRD N-terminal domain
CFN60_RS03695	PF10055	Uncharacterized small protein (DUF2292)
CFN60_RS03700	PF01687	Riboflavin kinase
CFN60_RS03705	PF01027	Inhibitor of apoptosis-promoting Bax1
CFN60_RS03710	PF01047	MarR family
CFN60_RS03715	PF01494	FAD binding domain
CFN60_RS03720	PF13037	Domain of unknown function (DUF3898)
CFN60_RS03720	PF13039	Protein of unknown function (DUF3900)
CFN60_RS03725	PF00175	Oxidoreductase NAD-binding domain 
CFN60_RS03725	PF00258	Flavodoxin
CFN60_RS03725	PF00067	Cytochrome P450
CFN60_RS03725	PF00667	FAD binding domain
CFN60_RS03730	PF00884	Sulfatase
CFN60_RS03735	PF00483	Nucleotidyl transferase
CFN60_RS03740	PF16363	GDP-mannose 4,6 dehydratase
CFN60_RS03745	PF03407	Nucleotide-diphospho-sugar transferase
CFN60_RS03750	PF00535	Glycosyl transferase family 2
CFN60_RS03755	PF03407	Nucleotide-diphospho-sugar transferase
CFN60_RS03760	PF07690	Major Facilitator Superfamily
CFN60_RS03765	PF13520	Amino acid permease
CFN60_RS03770	PF00171	Aldehyde dehydrogenase family
CFN60_RS03775	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFN60_RS03785	PF00535	Glycosyl transferase family 2
CFN60_RS03790	PF00005	ABC transporter
CFN60_RS03790	PF16326	ABC transporter C-terminal domain
CFN60_RS03790	PF12848	ABC transporter
CFN60_RS03795	PF13411	MerR HTH family regulatory protein
CFN60_RS03800	PF07690	Major Facilitator Superfamily
CFN60_RS03805	PF00005	ABC transporter
CFN60_RS03805	PF12848	ABC transporter
CFN60_RS03810	PF00271	Helicase conserved C-terminal domain
CFN60_RS03810	PF00270	DEAD/DEAH box helicase
CFN60_RS03815	PF00583	Acetyltransferase (GNAT) family
CFN60_RS03820	PF00107	Zinc-binding dehydrogenase
CFN60_RS03820	PF16884	N-terminal domain of oxidoreductase
CFN60_RS03825	PF11486	Protein of unknown function (DUF3212)
CFN60_RS03830	PF11181	Heat induced stress protein YflT
CFN60_RS03835	PF00544	Pectate lyase
CFN60_RS03840	PF00939	Sodium:sulfate symporter transmembrane region
CFN60_RS03860	PF06580	Histidine kinase
CFN60_RS03860	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS03865	PF00072	Response regulator receiver domain
CFN60_RS03865	PF04397	LytTr DNA-binding domain
CFN60_RS03875	PF04203	Sortase domain
CFN60_RS03880	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
CFN60_RS03880	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS03885	PF08279	HTH domain
CFN60_RS03885	PF00072	Response regulator receiver domain
CFN60_RS03885	PF12431	Transcriptional regulator 
CFN60_RS03890	PF03401	Tripartite tricarboxylate transporter family receptor
CFN60_RS03895	PF03600	Citrate transporter
CFN60_RS03900	PF00753	Metallo-beta-lactamase superfamily
CFN60_RS03905	PF02898	Nitric oxide synthase, oxygenase domain
CFN60_RS03910	PF00708	Acylphosphatase
CFN60_RS03915	PF03473	MOSC domain
CFN60_RS03915	PF03475	3-alpha domain
CFN60_RS03920	PF11121	Protein of unknown function (DUF2639)
CFN60_RS03930	PF11588	Protein of unknown function (DUF3243)
CFN60_RS03935	PF00557	Metallopeptidase family M24
CFN60_RS03940	PF00367	phosphotransferase system, EIIB
CFN60_RS03940	PF02378	Phosphotransferase system, EIIC 
CFN60_RS03945	PF10787	Uncharacterised protein from bacillus cereus group
CFN60_RS03950	PF00884	Sulfatase
CFN60_RS03955	PF09350	Domain of unknown function (DUF1992)
CFN60_RS03960	PF00011	Hsp20/alpha crystallin family
CFN60_RS03965	PF10676	Spore germination protein gerPA/gerPF
CFN60_RS03970	PF10676	Spore germination protein gerPA/gerPF
CFN60_RS03975	PF02378	Phosphotransferase system, EIIC 
CFN60_RS03975	PF00367	phosphotransferase system, EIIB
CFN60_RS03980	PF00128	Alpha amylase, catalytic domain
CFN60_RS03980	PF16657	Maltogenic Amylase, C-terminal domain
CFN60_RS03985	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS03985	PF07702	UTRA domain
CFN60_RS03990	PF00881	Nitroreductase family
CFN60_RS04005	PF00149	Calcineurin-like phosphoesterase
CFN60_RS04005	PF02872	5'-nucleotidase, C-terminal domain
CFN60_RS04010	PF01965	DJ-1/PfpI family
CFN60_RS04015	PF00356	Bacterial regulatory proteins, lacI family
CFN60_RS04020	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
CFN60_RS04020	PF08501	Shikimate dehydrogenase substrate binding domain
CFN60_RS04025	PF01487	Type I 3-dehydroquinase
CFN60_RS04030	PF07690	Major Facilitator Superfamily
CFN60_RS04035	PF06569	Protein of unknown function (DUF1128)
CFN60_RS04040	PF01451	Low molecular weight phosphotyrosine protein phosphatase
CFN60_RS04050	PF03631	Virulence factor BrkB
CFN60_RS04055	PF07690	Major Facilitator Superfamily
CFN60_RS04060	PF01699	Sodium/calcium exchanger protein
CFN60_RS04065	PF14167	YfkD-like protein
CFN60_RS04070	PF00924	Mechanosensitive ion channel
CFN60_RS04075	PF04055	Radical SAM superfamily
CFN60_RS04075	PF08756	YfkB-like domain
CFN60_RS04085	PF01522	Polysaccharide deacetylase
CFN60_RS04090	PF00005	ABC transporter
CFN60_RS04100	PF01569	PAP2 superfamily
CFN60_RS04105	PF00072	Response regulator receiver domain
CFN60_RS04105	PF00486	Transcriptional regulatory protein, C terminal
CFN60_RS04110	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS04110	PF00512	His Kinase A (phospho-acceptor) domain
CFN60_RS04115	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
CFN60_RS04115	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
CFN60_RS04125	PF01544	CorA-like Mg2+ transporter protein
CFN60_RS04130	PF00730	HhH-GPD superfamily base excision DNA repair protein
CFN60_RS04135	PF01938	TRAM domain
CFN60_RS04135	PF05958	tRNA (Uracil-5-)-methyltransferase
CFN60_RS04140	PF14118	YfzA-like protein
CFN60_RS04150	PF01207	Dihydrouridine synthase (Dus)
CFN60_RS04160	PF00676	Dehydrogenase E1 component
CFN60_RS04165	PF02780	Transketolase, C-terminal domain
CFN60_RS04165	PF02779	Transketolase, pyrimidine binding domain
CFN60_RS04170	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CFN60_RS04170	PF00364	Biotin-requiring enzyme
CFN60_RS04170	PF02817	e3 binding domain
CFN60_RS04175	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CFN60_RS04175	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFN60_RS04180	PF00158	Sigma-54 interaction domain
CFN60_RS04180	PF01590	GAF domain
CFN60_RS04180	PF02954	Bacterial regulatory protein, Fis family
CFN60_RS04185	PF08141	Small acid-soluble spore protein H family
CFN60_RS04190	PF11975	Family 4 glycosyl hydrolase C-terminal domain
CFN60_RS04190	PF02056	Family 4 glycosyl hydrolase
CFN60_RS04195	PF01380	SIS domain
CFN60_RS04195	PF01418	Helix-turn-helix domain, rpiR family
CFN60_RS04200	PF00367	phosphotransferase system, EIIB
CFN60_RS04200	PF02378	Phosphotransferase system, EIIC 
CFN60_RS04205	PF00005	ABC transporter
CFN60_RS04205	PF00664	ABC transporter transmembrane region
CFN60_RS04210	PF00664	ABC transporter transmembrane region
CFN60_RS04210	PF00005	ABC transporter
CFN60_RS04215	PF07681	DoxX
CFN60_RS04220	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CFN60_RS04225	PF01040	UbiA prenyltransferase family
CFN60_RS04230	PF03551	Transcriptional regulator PadR-like family
CFN60_RS04230	PF10400	Virulence activator alpha C-term
CFN60_RS04235	PF02525	Flavodoxin-like fold
CFN60_RS04240	PF01757	Acyltransferase family
CFN60_RS04245	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
CFN60_RS04245	PF00391	PEP-utilising enzyme, mobile domain
CFN60_RS04250	PF01337	Barstar (barnase inhibitor)
CFN60_RS04255	PF12867	DinB superfamily
CFN60_RS04260	PF07690	Major Facilitator Superfamily
CFN60_RS04265	PF01047	MarR family
CFN60_RS04270	PF03706	Lysylphosphatidylglycerol synthase TM region
CFN60_RS04270	PF09924	Uncharacterised conserved protein (DUF2156)
CFN60_RS04275	PF02567	Phenazine biosynthesis-like protein
CFN60_RS04280	PF00881	Nitroreductase family
CFN60_RS04285	PF14151	YfhD-like protein
CFN60_RS04290	PF14152	YfhE-like protein
CFN60_RS04295	PF01370	NAD dependent epimerase/dehydratase family
CFN60_RS04295	PF08338	Domain of unknown function (DUF1731)
CFN60_RS04300	PF02631	RecX family
CFN60_RS04305	PF08838	Protein of unknown function (DUF1811)
CFN60_RS04310	PF07690	Major Facilitator Superfamily
CFN60_RS04315	PF10794	Protein of unknown function (DUF2606)
CFN60_RS04320	PF00089	Trypsin
CFN60_RS04325	PF08176	Small acid-soluble spore protein K family
CFN60_RS04330	PF14043	WVELL protein
CFN60_RS04335	PF08239	Bacterial SH3 domain
CFN60_RS04340	PF13630	SdpI/YhfL protein family
CFN60_RS04345	PF00561	alpha/beta hydrolase fold
CFN60_RS04350	PF00535	Glycosyl transferase family 2
CFN60_RS04355	PF09586	Bacterial membrane protein YfhO
CFN60_RS04360	PF04307	LexA-binding, inner membrane-associated putative hydrolase
CFN60_RS04365	PF14815	NUDIX domain
CFN60_RS04365	PF00730	HhH-GPD superfamily base excision DNA repair protein
CFN60_RS04380	PF04259	Small, acid-soluble spore protein, gamma-type 
CFN60_RS04385	PF14182	YgaB-like protein
CFN60_RS04390	PF04167	Protein of unknown function (DUF402)
CFN60_RS04395	PF00664	ABC transporter transmembrane region
CFN60_RS04395	PF00005	ABC transporter
CFN60_RS04400	PF06081	Aromatic acid exporter family member 1
CFN60_RS04405	PF00202	Aminotransferase class-III
CFN60_RS04410	PF00578	AhpC/TSA family
CFN60_RS04415	PF01475	Ferric uptake regulator family
CFN60_RS04420	PF11023	Zinc-ribbon containing domain
CFN60_RS04425	PF18576	Helix-turn-helix domain
CFN60_RS04425	PF14540	Nucleotidyltransferase-like
CFN60_RS04530	PF03575	Peptidase family S51
CFN60_RS04535	PF01964	Radical SAM ThiC family
CFN60_RS04535	PF13667	ThiC-associated domain 
CFN60_RS04540	PF08031	Berberine and berberine like 
CFN60_RS04540	PF01565	FAD binding domain 
CFN60_RS04545	PF13040	Fur-regulated basic protein B
CFN60_RS04550	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CFN60_RS04555	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS04560	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS04560	PF12911	N-terminal TM domain of oligopeptide transport permease C
CFN60_RS04565	PF00005	ABC transporter
CFN60_RS04565	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CFN60_RS04570	PF00005	ABC transporter
CFN60_RS04570	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CFN60_RS04575	PF06628	Catalase-related immune-responsive
CFN60_RS04575	PF00199	Catalase
CFN60_RS04585	PF00005	ABC transporter
CFN60_RS04590	PF09084	NMT1/THI5 like
CFN60_RS04595	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS04600	PF00296	Luciferase-like monooxygenase
CFN60_RS04605	PF00253	Ribosomal protein S14p/S29e
CFN60_RS04615	PF01381	Helix-turn-helix
CFN60_RS04630	PF08331	Domain of unknown function (DUF1730)
CFN60_RS04635	PF12671	Putative amidase domain
CFN60_RS04640	PF00588	SpoU rRNA Methylase family
CFN60_RS04645	PF13171	Protein of unknown function (DUF4004)
CFN60_RS04650	PF04519	Polymer-forming cytoskeletal
CFN60_RS04660	PF08298	PrkA AAA domain
CFN60_RS04660	PF06798	PrkA serine protein kinase C-terminal domain
CFN60_RS04670	PF04285	Protein of unknown function (DUF444)
CFN60_RS04675	PF01047	MarR family
CFN60_RS04685	PF07690	Major Facilitator Superfamily
CFN60_RS04690	PF03358	NADPH-dependent FMN reductase
CFN60_RS04705	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS04710	PF00005	ABC transporter
CFN60_RS04715	PF00005	ABC transporter
CFN60_RS04720	PF12679	ABC-2 family transporter protein
CFN60_RS04725	PF00313	'Cold-shock' DNA-binding domain
CFN60_RS04735	PF03180	NLPA lipoprotein
CFN60_RS04740	PF00990	Diguanylate cyclase, GGDEF domain
CFN60_RS04740	PF07694	5TMR of 5TMR-LYT
CFN60_RS04745	PF00375	Sodium:dicarboxylate symporter family
CFN60_RS04755	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
CFN60_RS04765	PF07875	Coat F domain
CFN60_RS04770	PF00746	LPXTG cell wall anchor motif
CFN60_RS04770	PF02872	5'-nucleotidase, C-terminal domain
CFN60_RS04770	PF00149	Calcineurin-like phosphoesterase
CFN60_RS04770	PF00565	Staphylococcal nuclease homologue
CFN60_RS04775	PF04203	Sortase domain
CFN60_RS04780	PF00849	RNA pseudouridylate synthase
CFN60_RS04780	PF01479	S4 domain
CFN60_RS04785	PF17326	Family of unknown function (DUF5365)
CFN60_RS04790	PF00571	CBS domain
CFN60_RS04795	PF13419	Haloacid dehalogenase-like hydrolase
CFN60_RS04800	PF00583	Acetyltransferase (GNAT) family
CFN60_RS04800	PF00795	Carbon-nitrogen hydrolase
CFN60_RS04805	PF00202	Aminotransferase class-III
CFN60_RS04810	PF04309	Glycerol-3-phosphate responsive antiterminator
CFN60_RS04815	PF00230	Major intrinsic protein
CFN60_RS04820	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CFN60_RS04820	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CFN60_RS04825	PF01266	FAD dependent oxidoreductase
CFN60_RS04825	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
CFN60_RS04830	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CFN60_RS04830	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CFN60_RS04830	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CFN60_RS04830	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CFN60_RS04835	PF07730	Histidine kinase
CFN60_RS04835	PF13185	GAF domain
CFN60_RS04840	PF00072	Response regulator receiver domain
CFN60_RS04840	PF00196	Bacterial regulatory proteins, luxR family
CFN60_RS04845	PF03358	NADPH-dependent FMN reductase
CFN60_RS04850	PF14148	YhdB-like protein
CFN60_RS04855	PF13028	Protein of unknown function (DUF3889)
CFN60_RS04860	PF00877	NlpC/P60 family
CFN60_RS04860	PF01476	LysM domain
CFN60_RS04865	PF02082	Transcriptional regulator
CFN60_RS04875	PF05552	Conserved TM helix
CFN60_RS04880	PF04293	SpoVR like protein
CFN60_RS04885	PF00245	Alkaline phosphatase
CFN60_RS04890	PF01476	LysM domain
CFN60_RS04890	PF00877	NlpC/P60 family
CFN60_RS04895	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CFN60_RS04895	PF03466	LysR substrate binding domain
CFN60_RS04900	PF00285	Citrate synthase, C-terminal domain
CFN60_RS04910	PF13520	Amino acid permease
CFN60_RS04915	PF00209	Sodium:neurotransmitter symporter family
CFN60_RS04920	PF17453	Sigma-M inhibitor
CFN60_RS04925	PF13791	Sigma factor regulator C-terminal
CFN60_RS04925	PF13800	Sigma factor regulator N-terminal
CFN60_RS04930	PF08281	Sigma-70, region 4
CFN60_RS04930	PF04542	Sigma-70 region 2 
CFN60_RS04935	PF01553	Acyltransferase
CFN60_RS04940	PF03471	Transporter associated domain
CFN60_RS04940	PF01595	Cyclin M transmembrane N-terminal domain
CFN60_RS04940	PF00571	CBS domain
CFN60_RS04945	PF13411	MerR HTH family regulatory protein
CFN60_RS04950	PF00155	Aminotransferase class I and II
CFN60_RS04955	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS04955	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS04960	PF00571	CBS domain
CFN60_RS04960	PF03471	Transporter associated domain
CFN60_RS04960	PF01595	Cyclin M transmembrane N-terminal domain
CFN60_RS04965	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
CFN60_RS04970	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
CFN60_RS04975	PF03009	Glycerophosphoryl diester phosphodiesterase family
CFN60_RS04980	PF17444	Uncharacterized YhdX-like
CFN60_RS04985	PF00924	Mechanosensitive ion channel
CFN60_RS04990	PF02146	Sir2 family
CFN60_RS04995	PF01522	Polysaccharide deacetylase
CFN60_RS05000	PF01063	Amino-transferase class IV
CFN60_RS05005	PF13977	BetI-type transcriptional repressor, C-terminal
CFN60_RS05005	PF00440	Bacterial regulatory proteins, tetR family
CFN60_RS05015	PF00582	Universal stress protein family
CFN60_RS05020	PF00005	ABC transporter
CFN60_RS05020	PF00664	ABC transporter transmembrane region
CFN60_RS05025	PF00664	ABC transporter transmembrane region
CFN60_RS05025	PF00005	ABC transporter
CFN60_RS05030	PF13460	NAD(P)H-binding 
CFN60_RS05040	PF00269	Small, acid-soluble spore proteins, alpha/beta type
CFN60_RS05050	PF17277	Family of unknown function (DUF5342)
CFN60_RS05055	PF14398	YheC/D like ATP-grasp
CFN60_RS05060	PF14398	YheC/D like ATP-grasp
CFN60_RS05065	PF04286	Protein of unknown function (DUF445)
CFN60_RS05070	PF06133	Control of competence regulator ComK, YlbF/YmcA
CFN60_RS05075	PF08713	DNA alkylation repair enzyme
CFN60_RS05085	PF04055	Radical SAM superfamily
CFN60_RS05090	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
CFN60_RS05095	PF00999	Sodium/hydrogen exchanger family
CFN60_RS05100	PF02080	TrkA-C domain
CFN60_RS05110	PF00378	Enoyl-CoA hydratase/isomerase
CFN60_RS05115	PF14120	YhzD-like protein
CFN60_RS05120	PF13732	Domain of unknown function (DUF4162)
CFN60_RS05120	PF00005	ABC transporter
CFN60_RS05130	PF00149	Calcineurin-like phosphoesterase
CFN60_RS05135	PF13514	AAA domain
CFN60_RS05140	PF01966	HD domain
CFN60_RS05145	PF14147	Sporulation protein YhaL
CFN60_RS05155	PF09680	Family of unknown function
CFN60_RS05160	PF09680	Family of unknown function
CFN60_RS05170	PF11667	Putative zincin peptidase
CFN60_RS05180	PF08963	Protein of unknown function (DUF1878)
CFN60_RS05185	PF01047	MarR family
CFN60_RS05190	PF12732	YtxH-like protein
CFN60_RS05200	PF17099	Tryptophan transporter TrpP
CFN60_RS05205	PF00266	Aminotransferase class-V
CFN60_RS05210	PF01230	HIT domain
CFN60_RS05215	PF00005	ABC transporter
CFN60_RS05220	PF05975	Bacterial ABC transporter protein EcsB
CFN60_RS05225	PF12787	EcsC protein family
CFN60_RS05230	PF01546	Peptidase family M20/M25/M40
CFN60_RS05230	PF07687	Peptidase dimerisation domain
CFN60_RS05240	PF03992	Antibiotic biosynthesis monooxygenase
CFN60_RS05245	PF00905	Penicillin binding protein transpeptidase domain
CFN60_RS05245	PF00912	Transglycosylase
CFN60_RS05250	PF01208	Uroporphyrinogen decarboxylase (URO-D)
CFN60_RS05255	PF00762	Ferrochelatase
CFN60_RS05260	PF01593	Flavin containing amine oxidoreductase
CFN60_RS05265	PF17932	Tetracyclin repressor-like, C-terminal domain
CFN60_RS05265	PF00440	Bacterial regulatory proteins, tetR family
CFN60_RS05275	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
CFN60_RS05275	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
CFN60_RS05285	PF05343	M42 glutamyl aminopeptidase
CFN60_RS05290	PF00375	Sodium:dicarboxylate symporter family
CFN60_RS05295	PF14149	YhfH-like protein
CFN60_RS05300	PF12706	Beta-lactamase superfamily domain
CFN60_RS05305	PF10437	Bacterial lipoate protein ligase C-terminus
CFN60_RS05305	PF03099	Biotin/lipoate A/B protein ligase family
CFN60_RS05310	PF13460	NAD(P)H-binding 
CFN60_RS05315	PF00501	AMP-binding enzyme
CFN60_RS05315	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS05325	PF01435	Peptidase family M48
CFN60_RS05325	PF16491	CAAX prenyl protease N-terminal, five membrane helices
CFN60_RS05330	PF05922	Peptidase inhibitor I9
CFN60_RS05330	PF00082	Subtilase family
CFN60_RS05340	PF01497	Periplasmic binding protein
CFN60_RS05345	PF00300	Histidine phosphatase superfamily (branch 1)
CFN60_RS05350	PF02803	Thiolase, C-terminal domain
CFN60_RS05350	PF00108	Thiolase, N-terminal domain
CFN60_RS05355	PF00501	AMP-binding enzyme
CFN60_RS05355	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS05360	PF02632	BioY family
CFN60_RS05365	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFN60_RS05370	PF01266	FAD dependent oxidoreductase
CFN60_RS05370	PF00355	Rieske [2Fe-2S] domain
CFN60_RS05380	PF08858	IDEAL domain
CFN60_RS05385	PF06338	ComK protein
CFN60_RS05390	PF08818	Domain of unknown function (DU1801)
CFN60_RS05400	PF15493	Domain of unknown function, YrpD
CFN60_RS05405	PF05901	Excalibur calcium-binding domain
CFN60_RS05410	PF01906	Putative heavy-metal-binding
CFN60_RS05415	PF00474	Sodium:solute symporter family
CFN60_RS05420	PF11755	Protein of unknown function (DUF3311)
CFN60_RS05430	PF09335	SNARE associated Golgi protein
CFN60_RS05435	PF10502	Signal peptidase, peptidase S26 
CFN60_RS05440	PF01494	FAD binding domain
CFN60_RS05445	PF01047	MarR family
CFN60_RS05450	PF05145	Transition state regulatory protein AbrB
CFN60_RS05455	PF07690	Major Facilitator Superfamily
CFN60_RS05460	PF00440	Bacterial regulatory proteins, tetR family
CFN60_RS05460	PF08361	MAATS-type transcriptional repressor, C-terminal region
CFN60_RS05465	PF02915	Rubrerythrin
CFN60_RS05470	PF04239	Protein of unknown function (DUF421)
CFN60_RS05475	PF13361	UvrD-like helicase C-terminal domain
CFN60_RS05475	PF12705	PD-(D/E)XK nuclease superfamily
CFN60_RS05480	PF13361	UvrD-like helicase C-terminal domain
CFN60_RS05480	PF00580	UvrD/REP helicase N-terminal domain
CFN60_RS05480	PF12705	PD-(D/E)XK nuclease superfamily
CFN60_RS05485	PF12320	Type 5 capsule protein repressor C-terminal domain
CFN60_RS05485	PF00149	Calcineurin-like phosphoesterase
CFN60_RS05490	PF13476	AAA domain
CFN60_RS05500	PF10676	Spore germination protein gerPA/gerPF
CFN60_RS05505	PF10970	Spore germination protein GerPE 
CFN60_RS05515	PF10737	Spore germination protein GerPC
CFN60_RS05520	PF10803	Spore germination GerPB
CFN60_RS05525	PF10676	Spore germination protein gerPA/gerPF
CFN60_RS05530	PF09388	Spo0E like sporulation regulatory protein
CFN60_RS05535	PF01557	Fumarylacetoacetate (FAA) hydrolase family
CFN60_RS05540	PF07457	Protein of unknown function (DUF1516)
CFN60_RS05545	PF10949	Protein of unknown function (DUF2777)
CFN60_RS05550	PF13537	Glutamine amidotransferase domain
CFN60_RS05550	PF00733	Asparagine synthase
CFN60_RS05560	PF01554	MatE
CFN60_RS05565	PF02311	AraC-like ligand binding domain
CFN60_RS05565	PF12833	Helix-turn-helix domain
CFN60_RS05570	PF00356	Bacterial regulatory proteins, lacI family
CFN60_RS05575	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CFN60_RS05575	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CFN60_RS05580	PF05163	DinB family
CFN60_RS05585	PF13599	Pentapeptide repeats (9 copies)
CFN60_RS05590	PF13673	Acetyltransferase (GNAT) domain
CFN60_RS05595	PF02574	Homocysteine S-methyltransferase
CFN60_RS05595	PF02219	Methylenetetrahydrofolate reductase
CFN60_RS05600	PF04461	Protein of unknown function (DUF520)
CFN60_RS05605	PF13509	S1 domain
CFN60_RS05605	PF17783	CvfB-like winged helix domain
CFN60_RS05610	PF02608	ABC transporter substrate-binding protein PnrA-like
CFN60_RS05615	PF12729	Four helix bundle sensory module for signal transduction
CFN60_RS05615	PF00672	HAMP domain
CFN60_RS05615	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFN60_RS05620	PF00067	Cytochrome P450
CFN60_RS05630	PF02645	Uncharacterised protein, DegV family COG1307
CFN60_RS05635	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CFN60_RS05635	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CFN60_RS05640	PF12690	Intracellular proteinase inhibitor
CFN60_RS05645	PF12758	Protein of unknown function (DUF3813)
CFN60_RS05655	PF00326	Prolyl oligopeptidase family
CFN60_RS05660	PF01883	Iron-sulfur cluster assembly protein
CFN60_RS05665	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CFN60_RS05670	PF01565	FAD binding domain 
CFN60_RS05675	PF07690	Major Facilitator Superfamily
CFN60_RS05680	PF01118	Semialdehyde dehydrogenase, NAD binding domain
CFN60_RS05680	PF02774	Semialdehyde dehydrogenase, dimerisation domain
CFN60_RS05685	PF01960	ArgJ family
CFN60_RS05690	PF00696	Amino acid kinase family
CFN60_RS05695	PF00202	Aminotransferase class-III
CFN60_RS05700	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
CFN60_RS05700	PF00117	Glutamine amidotransferase class-I
CFN60_RS05705	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CFN60_RS05705	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CFN60_RS05710	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
CFN60_RS05710	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CFN60_RS05715	PF14168	YjzC-like protein
CFN60_RS05720	PF11151	Protein of unknown function (DUF2929)
CFN60_RS05740	PF02608	ABC transporter substrate-binding protein PnrA-like
CFN60_RS05745	PF10815	ComZ
CFN60_RS05755	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
CFN60_RS05755	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
CFN60_RS05760	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS05760	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS05765	PF10026	Predicted Zn-dependent protease (DUF2268)
CFN60_RS05770	PF00005	ABC transporter
CFN60_RS05770	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CFN60_RS05775	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CFN60_RS05775	PF00005	ABC transporter
CFN60_RS05780	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CFN60_RS05785	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS05790	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS05790	PF12911	N-terminal TM domain of oligopeptide transport permease C
CFN60_RS05795	PF12227	Protein of unknown function (DUF3603)
CFN60_RS05800	PF00579	tRNA synthetases class I (W and Y)
CFN60_RS05805	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CFN60_RS05810	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS05815	PF12911	N-terminal TM domain of oligopeptide transport permease C
CFN60_RS05815	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS05820	PF00005	ABC transporter
CFN60_RS05820	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CFN60_RS05825	PF00005	ABC transporter
CFN60_RS05825	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CFN60_RS05835	PF13508	Acetyltransferase (GNAT) domain
CFN60_RS05840	PF03960	ArsC family
CFN60_RS05845	PF03741	Integral membrane protein TerC family
CFN60_RS05850	PF05389	Negative regulator of genetic competence (MecA)
CFN60_RS05855	PF06054	Competence protein CoiA-like family
CFN60_RS05860	PF08439	Oligopeptidase F
CFN60_RS05860	PF01432	Peptidase family M3
CFN60_RS05875	PF01152	Bacterial-like globin
CFN60_RS05880	PF01464	Transglycosylase SLT domain
CFN60_RS05885	PF01928	CYTH domain
CFN60_RS05895	PF04607	Region found in RelA / SpoT proteins
CFN60_RS05900	PF01513	ATP-NAD kinase
CFN60_RS05905	PF00849	RNA pseudouridylate synthase
CFN60_RS05910	PF00149	Calcineurin-like phosphoesterase
CFN60_RS05920	PF02080	TrkA-C domain
CFN60_RS05920	PF00999	Sodium/hydrogen exchanger family
CFN60_RS05920	PF02254	TrkA-N domain
CFN60_RS05925	PF03070	TENA/THI-4/PQQC family
CFN60_RS05930	PF02581	Thiamine monophosphate synthase
CFN60_RS05935	PF01266	FAD dependent oxidoreductase
CFN60_RS05940	PF02597	ThiS family
CFN60_RS05945	PF05690	Thiazole biosynthesis protein ThiG
CFN60_RS05950	PF00899	ThiF family
CFN60_RS05955	PF08543	Phosphomethylpyrimidine kinase
CFN60_RS05965	PF14153	Spore coat protein CotO
CFN60_RS05970	PF10612	Spore coat protein Z
CFN60_RS05975	PF10612	Spore coat protein Z
CFN60_RS05980	PF07552	Spore Coat Protein X and V domain
CFN60_RS05990	PF07552	Spore Coat Protein X and V domain
CFN60_RS05995	PF07098	Protein of unknown function (DUF1360)
CFN60_RS06010	PF14069	Stage VI sporulation protein F
CFN60_RS06015	PF13361	UvrD-like helicase C-terminal domain
CFN60_RS06015	PF00580	UvrD/REP helicase N-terminal domain
CFN60_RS06025	PF00753	Metallo-beta-lactamase superfamily
CFN60_RS06035	PF00005	ABC transporter
CFN60_RS06045	PF13673	Acetyltransferase (GNAT) domain
CFN60_RS06055	PF00756	Putative esterase
CFN60_RS06060	PF01053	Cys/Met metabolism PLP-dependent enzyme
CFN60_RS06065	PF01053	Cys/Met metabolism PLP-dependent enzyme
CFN60_RS06130	PF08281	Sigma-70, region 4
CFN60_RS06145	PF07516	SecA Wing and Scaffold domain
CFN60_RS06145	PF01043	SecA preprotein cross-linking domain
CFN60_RS06145	PF07517	SecA DEAD-like domain
CFN60_RS06145	PF02810	SEC-C motif
CFN60_RS06160	PF03992	Antibiotic biosynthesis monooxygenase
CFN60_RS06165	PF07690	Major Facilitator Superfamily
CFN60_RS06170	PF01047	MarR family
CFN60_RS06175	PF07745	Glycosyl hydrolase family 53
CFN60_RS06180	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
CFN60_RS06180	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
CFN60_RS06185	PF16363	GDP-mannose 4,6 dehydratase
CFN60_RS06190	PF10509	Galactokinase galactose-binding signature
CFN60_RS06190	PF08544	GHMP kinases C terminal 
CFN60_RS06190	PF00288	GHMP kinases N terminal domain
CFN60_RS06195	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CFN60_RS06195	PF02378	Phosphotransferase system, EIIC 
CFN60_RS06200	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
CFN60_RS06205	PF00232	Glycosyl hydrolase family 1
CFN60_RS06210	PF08220	DeoR-like helix-turn-helix domain
CFN60_RS06210	PF00455	DeoR C terminal sensor domain
CFN60_RS06235	PF02308	MgtC family
CFN60_RS06245	PF14070	Putative motility protein
CFN60_RS06250	PF10990	Protein of unknown function (DUF2809)
CFN60_RS06255	PF14172	Domain of unknown function (DUF4309)
CFN60_RS06260	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CFN60_RS06260	PF01568	Molydopterin dinucleotide binding domain
CFN60_RS06260	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CFN60_RS06260	PF00384	Molybdopterin oxidoreductase
CFN60_RS06260	PF12838	4Fe-4S dicluster domain
CFN60_RS06265	PF07849	Protein of unknown function (DUF1641)
CFN60_RS06270	PF00067	Cytochrome P450
CFN60_RS06275	PF04101	Glycosyltransferase family 28 C-terminal domain
CFN60_RS06285	PF02602	Uroporphyrinogen-III synthase HemD
CFN60_RS06290	PF03649	Uncharacterised protein family (UPF0014)
CFN60_RS06295	PF00005	ABC transporter
CFN60_RS06300	PF13536	Putative multidrug resistance efflux transporter
CFN60_RS06310	PF07849	Protein of unknown function (DUF1641)
CFN60_RS06315	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFN60_RS06320	PF02614	Glucuronate isomerase
CFN60_RS06330	PF00356	Bacterial regulatory proteins, lacI family
CFN60_RS06335	PF08125	Mannitol dehydrogenase C-terminal domain
CFN60_RS06335	PF01232	Mannitol dehydrogenase Rossmann domain
CFN60_RS06340	PF04295	D-galactarate dehydratase / Altronate hydrolase, C terminus
CFN60_RS06340	PF08666	SAF domain
CFN60_RS06345	PF01925	Sulfite exporter TauE/SafE
CFN60_RS06350	PF05163	DinB family
CFN60_RS06355	PF18801	response regulator aspartate phosphatase H, N terminal
CFN60_RS06365	PF01476	LysM domain
CFN60_RS06365	PF01510	N-acetylmuramoyl-L-alanine amidase
CFN60_RS06365	PF01471	Putative peptidoglycan binding domain
CFN60_RS06370	PF08000	Bacterial PH domain
CFN60_RS06375	PF05908	Poly-gamma-glutamate hydrolase
CFN60_RS06380	PF06114	IrrE N-terminal-like domain
CFN60_RS06385	PF01381	Helix-turn-helix
CFN60_RS06400	PF01695	IstB-like ATP binding protein
CFN60_RS06415	PF17356	Phage-like element PBSX protein XtrA
CFN60_RS06420	PF08281	Sigma-70, region 4
CFN60_RS06425	PF03592	Terminase small subunit 
CFN60_RS06425	PF10668	Phage terminase small subunit
CFN60_RS06430	PF17288	Terminase RNAseH like domain
CFN60_RS06430	PF04466	Phage terminase large subunit
CFN60_RS06435	PF04860	Phage portal protein
CFN60_RS06440	PF14550	Putative phage serine protease XkdF
CFN60_RS06445	PF05065	Phage capsid family 
CFN60_RS06450	PF11436	Protein of unknown function (DUF3199)
CFN60_RS06455	PF12206	Domain of unknown function (DUF3599)
CFN60_RS06460	PF04883	Bacteriophage HK97-gp10, putative tail-component
CFN60_RS06475	PF17481	Phage tail sheath protein beta-sandwich domain
CFN60_RS06475	PF04984	Phage tail sheath protein subtilisin-like domain
CFN60_RS06475	PF17482	Phage tail sheath C-terminal domain
CFN60_RS06480	PF09393	Phage tail tube protein
CFN60_RS06485	PF08890	Phage XkdN-like tail assembly chaperone protein, TAC
CFN60_RS06495	PF01464	Transglycosylase SLT domain
CFN60_RS06495	PF01464	Transglycosylase SLT domain
CFN60_RS06495	PF01464	Transglycosylase SLT domain
CFN60_RS06500	PF01476	LysM domain
CFN60_RS06510	PF10844	Protein of unknown function (DUF2577)
CFN60_RS06515	PF10934	Protein of unknown function (DUF2634)
CFN60_RS06520	PF04865	Baseplate J-like protein
CFN60_RS06525	PF10076	Uncharacterised protein conserved in bacteria (DUF2313)
CFN60_RS06545	PF09693	Phage uncharacterised protein (Phage_XkdX)
CFN60_RS06555	PF10779	Haemolysin XhlA
CFN60_RS06560	PF04688	SPP1 phage holin
CFN60_RS06565	PF01471	Putative peptidoglycan binding domain
CFN60_RS06565	PF01476	LysM domain
CFN60_RS06565	PF01510	N-acetylmuramoyl-L-alanine amidase
CFN60_RS06570	PF14185	Antitoxin SpoIISB, type II toxin-antitoxin system 
CFN60_RS06575	PF14171	Toxin SpoIISA, type II toxin-antitoxin system
CFN60_RS06580	PF01384	Phosphate transporter family
CFN60_RS06585	PF01865	Protein of unknown function DUF47
CFN60_RS06590	PF13520	Amino acid permease
CFN60_RS06595	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CFN60_RS06600	PF13231	Dolichyl-phosphate-mannose-protein mannosyltransferase
CFN60_RS06605	PF00535	Glycosyl transferase family 2
CFN60_RS06615	PF13180	PDZ domain
CFN60_RS06620	PF07690	Major Facilitator Superfamily
CFN60_RS06625	PF04951	D-aminopeptidase
CFN60_RS06630	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS06635	PF12911	N-terminal TM domain of oligopeptide transport permease C
CFN60_RS06635	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS06640	PF00005	ABC transporter
CFN60_RS06640	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CFN60_RS06645	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CFN60_RS06650	PF17676	LD-carboxypeptidase C-terminal domain
CFN60_RS06650	PF02016	LD-carboxypeptidase N-terminal domain
CFN60_RS06655	PF13378	Enolase C-terminal domain-like
CFN60_RS06655	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
CFN60_RS06660	PF00877	NlpC/P60 family
CFN60_RS06665	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CFN60_RS06665	PF00005	ABC transporter
CFN60_RS06670	PF10282	Lactonase, 7-bladed beta-propeller
CFN60_RS06680	PF03061	Thioesterase superfamily
CFN60_RS06685	PF13302	Acetyltransferase (GNAT) domain
CFN60_RS06690	PF00893	Small Multidrug Resistance protein
CFN60_RS06695	PF00893	Small Multidrug Resistance protein
CFN60_RS06700	PF01842	ACT domain
CFN60_RS06700	PF00551	Formyl transferase
CFN60_RS06705	PF01472	PUA domain
CFN60_RS06705	PF00696	Amino acid kinase family
CFN60_RS06710	PF00171	Aldehyde dehydrogenase family
CFN60_RS06715	PF02566	OsmC-like protein
CFN60_RS06720	PF01047	MarR family
CFN60_RS06725	PF02566	OsmC-like protein
CFN60_RS06740	PF00535	Glycosyl transferase family 2
CFN60_RS06740	PF13181	Tetratricopeptide repeat
CFN60_RS06750	PF12832	MFS_1 like family
CFN60_RS06760	PF01717	Cobalamin-independent synthase, Catalytic domain
CFN60_RS06760	PF08267	Cobalamin-independent synthase, N-terminal domain
CFN60_RS06765	PF00082	Subtilase family
CFN60_RS06770	PF01740	STAS domain
CFN60_RS06775	PF02361	Cobalt transport protein
CFN60_RS06780	PF00005	ABC transporter
CFN60_RS06785	PF09819	ABC-type cobalt transport system, permease component
CFN60_RS06790	PF01476	LysM domain
CFN60_RS06790	PF00704	Glycosyl hydrolases family 18
CFN60_RS06795	PF11132	Transcriptional regulator protein (SplA)
CFN60_RS06810	PF01769	Divalent cation transporter
CFN60_RS06810	PF00571	CBS domain
CFN60_RS06810	PF03448	MgtE intracellular N domain
CFN60_RS06815	PF13411	MerR HTH family regulatory protein
CFN60_RS06830	PF01047	MarR family
CFN60_RS06840	PF01068	ATP dependent DNA ligase domain
CFN60_RS06845	PF02735	Ku70/Ku80 beta-barrel domain
CFN60_RS06850	PF09335	SNARE associated Golgi protein
CFN60_RS06855	PF03741	Integral membrane protein TerC family
CFN60_RS06860	PF04542	Sigma-70 region 2 
CFN60_RS06865	PF12791	Anti-sigma factor N-terminus
CFN60_RS06870	PF00269	Small, acid-soluble spore proteins, alpha/beta type
CFN60_RS06875	PF08876	Domain of unknown function (DUF1836)
CFN60_RS06880	PF01435	Peptidase family M48
CFN60_RS06885	PF02386	Cation transport protein
CFN60_RS06890	PF04239	Protein of unknown function (DUF421)
CFN60_RS06900	PF01757	Acyltransferase family
CFN60_RS06905	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS06905	PF00512	His Kinase A (phospho-acceptor) domain
CFN60_RS06905	PF13426	PAS domain
CFN60_RS06905	PF13188	PAS domain
CFN60_RS06905	PF00989	PAS fold
CFN60_RS06910	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
CFN60_RS06910	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
CFN60_RS06915	PF01008	Initiation factor 2 subunit family
CFN60_RS06920	PF01636	Phosphotransferase enzyme family
CFN60_RS06925	PF00795	Carbon-nitrogen hydrolase
CFN60_RS06930	PF00155	Aminotransferase class I and II
CFN60_RS06935	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
CFN60_RS06935	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
CFN60_RS06945	PF00596	Class II Aldolase and Adducin N-terminal domain
CFN60_RS06950	PF03079	ARD/ARD' family
CFN60_RS06955	PF09388	Spo0E like sporulation regulatory protein
CFN60_RS06960	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS06960	PF00512	His Kinase A (phospho-acceptor) domain
CFN60_RS06960	PF02743	Cache domain
CFN60_RS06965	PF01047	MarR family
CFN60_RS06970	PF00691	OmpA family
CFN60_RS06970	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
CFN60_RS06975	PF01618	MotA/TolQ/ExbB proton channel family
CFN60_RS06980	PF07724	AAA domain (Cdc48 subfamily)
CFN60_RS06980	PF17871	AAA lid domain
CFN60_RS06980	PF10431	C-terminal, D2-small domain, of ClpB protein 
CFN60_RS06980	PF00004	ATPase family associated with various cellular activities (AAA)
CFN60_RS07000	PF06508	Queuosine biosynthesis protein QueC
CFN60_RS07005	PF01242	6-pyruvoyl tetrahydropterin synthase
CFN60_RS07010	PF04055	Radical SAM superfamily
CFN60_RS07015	PF14489	QueF-like protein
CFN60_RS07020	PF01638	HxlR-like helix-turn-helix
CFN60_RS07030	PF14489	QueF-like protein
CFN60_RS07035	PF11514	Protein of unknown function (DUF3219)
CFN60_RS07040	PF09953	Uncharacterized protein conserved in bacteria (DUF2187)
CFN60_RS07050	PF07486	Cell Wall Hydrolase
CFN60_RS07055	PF01943	Polysaccharide biosynthesis protein
CFN60_RS07060	PF00578	AhpC/TSA family
CFN60_RS07070	PF01321	Creatinase/Prolidase N-terminal domain
CFN60_RS07070	PF00557	Metallopeptidase family M24
CFN60_RS07075	PF00356	Bacterial regulatory proteins, lacI family
CFN60_RS07075	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
CFN60_RS07080	PF00874	PRD domain
CFN60_RS07080	PF03123	CAT RNA binding domain
CFN60_RS07085	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CFN60_RS07085	PF02378	Phosphotransferase system, EIIC 
CFN60_RS07085	PF00367	phosphotransferase system, EIIB
CFN60_RS07090	PF00381	PTS HPr component phosphorylation site
CFN60_RS07095	PF00391	PEP-utilising enzyme, mobile domain
CFN60_RS07095	PF02896	PEP-utilising enzyme, TIM barrel domain
CFN60_RS07095	PF05524	PEP-utilising enzyme, N-terminal
CFN60_RS07100	PF11132	Transcriptional regulator protein (SplA)
CFN60_RS07110	PF02743	Cache domain
CFN60_RS07110	PF00672	HAMP domain
CFN60_RS07110	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFN60_RS07115	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
CFN60_RS07115	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
CFN60_RS07125	PF00543	Nitrogen regulatory protein P-II
CFN60_RS07130	PF00188	Cysteine-rich secretory protein family
CFN60_RS07135	PF00905	Penicillin binding protein transpeptidase domain
CFN60_RS07135	PF03717	Penicillin-binding Protein dimerisation domain
CFN60_RS07145	PF00155	Aminotransferase class I and II
CFN60_RS07160	PF01584	CheW-like domain
CFN60_RS07160	PF00072	Response regulator receiver domain
CFN60_RS07165	PF14177	YkyB-like protein
CFN60_RS07170	PF07690	Major Facilitator Superfamily
CFN60_RS07175	PF01476	LysM domain
CFN60_RS07175	PF03734	L,D-transpeptidase catalytic domain
CFN60_RS07180	PF10518	TAT (twin-arginine translocation) pathway signal sequence
CFN60_RS07180	PF00149	Calcineurin-like phosphoesterase
CFN60_RS07195	PF00563	EAL domain
CFN60_RS07195	PF10388	EAL-domain associated signalling protein domain
CFN60_RS07200	PF08796	Protein of unknown function (DUF1797)
CFN60_RS07205	PF04308	Ribonuclease H-like
CFN60_RS07210	PF14156	Antirepressor AbbA
CFN60_RS07220	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CFN60_RS07220	PF03466	LysR substrate binding domain
CFN60_RS07225	PF00258	Flavodoxin
CFN60_RS07235	PF00258	Flavodoxin
CFN60_RS07240	PF14602	Hexapeptide repeat of succinyl-transferase
CFN60_RS07240	PF00132	Bacterial transferase hexapeptide (six repeats)
CFN60_RS07240	PF08503	Tetrahydrodipicolinate succinyltransferase N-terminal
CFN60_RS07245	PF01546	Peptidase family M20/M25/M40
CFN60_RS07245	PF07687	Peptidase dimerisation domain
CFN60_RS07250	PF03698	Uncharacterised protein family (UPF0180)
CFN60_RS07255	PF00924	Mechanosensitive ion channel
CFN60_RS07260	PF00578	AhpC/TSA family
CFN60_RS07275	PF12804	MobA-like NTP transferase domain
CFN60_RS07280	PF00899	ThiF family
CFN60_RS07285	PF00994	Probable molybdopterin binding domain
CFN60_RS07285	PF03453	MoeA N-terminal region (domain I and II)
CFN60_RS07285	PF03454	MoeA C-terminal region (domain IV)
CFN60_RS07290	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
CFN60_RS07295	PF02391	MoaE protein
CFN60_RS07300	PF02597	ThiS family
CFN60_RS07305	PF04893	Yip1 domain
CFN60_RS07310	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
CFN60_RS07315	PF00005	ABC transporter
CFN60_RS07320	PF12704	MacB-like periplasmic core domain
CFN60_RS07320	PF02687	FtsX-like permease family
CFN60_RS07325	PF08220	DeoR-like helix-turn-helix domain
CFN60_RS07325	PF00455	DeoR C terminal sensor domain
CFN60_RS07330	PF00294	pfkB family carbohydrate kinase
CFN60_RS07335	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CFN60_RS07335	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CFN60_RS07340	PF10502	Signal peptidase, peptidase S26 
CFN60_RS07350	PF12848	ABC transporter
CFN60_RS07350	PF00005	ABC transporter
CFN60_RS07355	PF02558	Ketopantoate reductase PanE/ApbA
CFN60_RS07355	PF08546	Ketopantoate reductase PanE/ApbA C terminal
CFN60_RS07360	PF02073	Thermophilic metalloprotease (M29)
CFN60_RS07365	PF17447	Uncharacterized YkpC-like
CFN60_RS07380	PF18277	AbrB C-terminal domain
CFN60_RS07380	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
CFN60_RS07385	PF00989	PAS fold
CFN60_RS07385	PF00512	His Kinase A (phospho-acceptor) domain
CFN60_RS07385	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS07390	PF06094	Gamma-glutamyl cyclotransferase, AIG2-like
CFN60_RS07395	PF02254	TrkA-N domain
CFN60_RS07395	PF02080	TrkA-C domain
CFN60_RS07400	PF13382	Adenine deaminase C-terminal domain
CFN60_RS07400	PF01979	Amidohydrolase family
CFN60_RS07405	PF00753	Metallo-beta-lactamase superfamily
CFN60_RS07405	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
CFN60_RS07405	PF17770	Ribonuclease J C-terminal domain
CFN60_RS07410	PF07288	Protein of unknown function (DUF1447)
CFN60_RS07425	PF01327	Polypeptide deformylase
CFN60_RS07435	PF10368	Putative cell-wall binding lipoprotein
CFN60_RS07445	PF00698	Acyl transferase domain
CFN60_RS07455	PF08659	KR domain
CFN60_RS07455	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS07455	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS07455	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS07455	PF14765	Polyketide synthase dehydratase
CFN60_RS07455	PF00550	Phosphopantetheine attachment site
CFN60_RS07460	PF00501	AMP-binding enzyme
CFN60_RS07460	PF00668	Condensation domain
CFN60_RS07460	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS07460	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS07460	PF14765	Polyketide synthase dehydratase
CFN60_RS07460	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS07460	PF08659	KR domain
CFN60_RS07460	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS07460	PF00550	Phosphopantetheine attachment site
CFN60_RS07465	PF08659	KR domain
CFN60_RS07465	PF14765	Polyketide synthase dehydratase
CFN60_RS07465	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS07465	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS07465	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS07465	PF00550	Phosphopantetheine attachment site
CFN60_RS07470	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS07470	PF00550	Phosphopantetheine attachment site
CFN60_RS07470	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS07470	PF08659	KR domain
CFN60_RS07470	PF14765	Polyketide synthase dehydratase
CFN60_RS07470	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS07475	PF00550	Phosphopantetheine attachment site
CFN60_RS07475	PF08659	KR domain
CFN60_RS07475	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS07475	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS07475	PF14765	Polyketide synthase dehydratase
CFN60_RS07475	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS07480	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS07480	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS07480	PF14765	Polyketide synthase dehydratase
CFN60_RS07480	PF00501	AMP-binding enzyme
CFN60_RS07480	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS07480	PF00668	Condensation domain
CFN60_RS07480	PF08659	KR domain
CFN60_RS07480	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS07480	PF00550	Phosphopantetheine attachment site
CFN60_RS07485	PF00144	Beta-lactamase
CFN60_RS07485	PF11954	Domain of unknown function (DUF3471)
CFN60_RS07490	PF00676	Dehydrogenase E1 component
CFN60_RS07495	PF02780	Transketolase, C-terminal domain
CFN60_RS07495	PF02779	Transketolase, pyrimidine binding domain
CFN60_RS07500	PF02817	e3 binding domain
CFN60_RS07500	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CFN60_RS07500	PF00364	Biotin-requiring enzyme
CFN60_RS07505	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CFN60_RS07505	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFN60_RS07520	PF13790	SR1 protein
CFN60_RS07525	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
CFN60_RS07525	PF01276	Orn/Lys/Arg decarboxylase, major domain
CFN60_RS07530	PF05256	Uncharacterised protein family (UPF0223)
CFN60_RS07535	PF06335	Protein of unknown function (DUF1054)
CFN60_RS07550	PF00459	Inositol monophosphatase family
CFN60_RS07555	PF00583	Acetyltransferase (GNAT) family
CFN60_RS07560	PF01447	Thermolysin metallopeptidase, catalytic domain
CFN60_RS07560	PF02868	Thermolysin metallopeptidase, alpha-helical domain
CFN60_RS07560	PF03413	Peptidase propeptide and YPEB domain
CFN60_RS07560	PF07504	Fungalysin/Thermolysin Propeptide Motif
CFN60_RS07575	PF04542	Sigma-70 region 2 
CFN60_RS07575	PF08281	Sigma-70, region 4
CFN60_RS07580	PF13490	Putative zinc-finger
CFN60_RS07590	PF17259	Family of unknown function (DUF5325)
CFN60_RS07595	PF03144	Elongation factor Tu domain 2
CFN60_RS07595	PF14492	Elongation Factor G, domain II
CFN60_RS07595	PF00009	Elongation factor Tu GTP binding domain
CFN60_RS07595	PF00679	Elongation factor G C-terminus
CFN60_RS07600	PF14036	YlaH-like protein
CFN60_RS07605	PF09963	Uncharacterized protein conserved in bacteria (DUF2197)
CFN60_RS07610	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
CFN60_RS07615	PF13638	PIN domain
CFN60_RS07615	PF02562	PhoH-like protein
CFN60_RS07625	PF04960	Glutaminase
CFN60_RS07630	PF07408	Protein of unknown function (DUF1507)
CFN60_RS07635	PF01098	Cell cycle protein
CFN60_RS07640	PF00364	Biotin-requiring enzyme
CFN60_RS07640	PF00289	Biotin carboxylase, N-terminal domain
CFN60_RS07640	PF02436	Conserved carboxylase domain
CFN60_RS07640	PF02785	Biotin carboxylase C-terminal domain
CFN60_RS07640	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CFN60_RS07640	PF00682	HMGL-like
CFN60_RS07645	PF02628	Cytochrome oxidase assembly protein
CFN60_RS07650	PF01040	UbiA prenyltransferase family
CFN60_RS07655	PF00034	Cytochrome c
CFN60_RS07655	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
CFN60_RS07655	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
CFN60_RS07660	PF00115	Cytochrome C and Quinol oxidase polypeptide I
CFN60_RS07665	PF00510	Cytochrome c oxidase subunit III
CFN60_RS07670	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
CFN60_RS07675	PF09678	Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
CFN60_RS07680	PF08868	YugN-like family
CFN60_RS07685	PF00571	CBS domain
CFN60_RS07690	PF00188	Cysteine-rich secretory protein family
CFN60_RS07690	PF14504	CAP-associated N-terminal
CFN60_RS07695	PF14071	Putative coat protein
CFN60_RS07700	PF14003	YlbE-like protein
CFN60_RS07705	PF06133	Control of competence regulator ComK, YlbF/YmcA
CFN60_RS07710	PF09902	Uncharacterized protein conserved in bacteria (DUF2129)
CFN60_RS07720	PF01467	Cytidylyltransferase-like
CFN60_RS07725	PF07670	Nucleoside recognition
CFN60_RS07730	PF01734	Patatin-like phospholipase
CFN60_RS07735	PF05362	Lon protease (S16) C-terminal proteolytic domain
CFN60_RS07735	PF13180	PDZ domain
CFN60_RS07740	PF05636	HIGH Nucleotidyl Transferase
CFN60_RS07745	PF02620	Large ribosomal RNA subunit accumulation protein YceD
CFN60_RS07750	PF01783	Ribosomal L32p protein family
CFN60_RS07760	PF00583	Acetyltransferase (GNAT) family
CFN60_RS07765	PF08546	Ketopantoate reductase PanE/ApbA C terminal
CFN60_RS07765	PF02558	Ketopantoate reductase PanE/ApbA
CFN60_RS07770	PF10079	Bacillithiol biosynthesis BshC 
CFN60_RS07775	PF02381	MraZ protein, putative antitoxin-like
CFN60_RS07780	PF01795	MraW methylase family
CFN60_RS07790	PF03717	Penicillin-binding Protein dimerisation domain
CFN60_RS07790	PF03793	PASTA domain
CFN60_RS07790	PF00905	Penicillin binding protein transpeptidase domain
CFN60_RS07795	PF03793	PASTA domain
CFN60_RS07795	PF03717	Penicillin-binding Protein dimerisation domain
CFN60_RS07795	PF00905	Penicillin binding protein transpeptidase domain
CFN60_RS07800	PF01225	Mur ligase family, catalytic domain
CFN60_RS07800	PF02875	Mur ligase family, glutamate ligase domain
CFN60_RS07800	PF08245	Mur ligase middle domain
CFN60_RS07805	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
CFN60_RS07805	PF00953	Glycosyl transferase family 4
CFN60_RS07810	PF08245	Mur ligase middle domain
CFN60_RS07810	PF02875	Mur ligase family, glutamate ligase domain
CFN60_RS07815	PF01098	Cell cycle protein
CFN60_RS07820	PF04101	Glycosyltransferase family 28 C-terminal domain
CFN60_RS07820	PF03033	Glycosyltransferase family 28 N-terminal domain
CFN60_RS07825	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
CFN60_RS07825	PF01565	FAD binding domain 
CFN60_RS07830	PF08478	POTRA domain, FtsQ-type
CFN60_RS07835	PF02491	SHS2 domain inserted in FTSA
CFN60_RS07840	PF00091	Tubulin/FtsZ family, GTPase domain
CFN60_RS07840	PF12327	FtsZ family, C-terminal domain
CFN60_RS07845	PF05922	Peptidase inhibitor I9
CFN60_RS07845	PF00082	Subtilase family
CFN60_RS07850	PF03419	Sporulation factor SpoIIGA 
CFN60_RS07855	PF04542	Sigma-70 region 2 
CFN60_RS07855	PF04545	Sigma-70, region 4
CFN60_RS07860	PF04545	Sigma-70, region 4
CFN60_RS07860	PF04539	Sigma-70 region 3
CFN60_RS07860	PF04542	Sigma-70 region 2 
CFN60_RS07865	PF00005	ABC transporter
CFN60_RS07870	PF01546	Peptidase family M20/M25/M40
CFN60_RS07870	PF07687	Peptidase dimerisation domain
CFN60_RS07875	PF05239	PRC-barrel domain
CFN60_RS07880	PF02578	Multi-copper polyphenol oxidoreductase laccase
CFN60_RS07885	PF01168	Alanine racemase, N-terminal domain
CFN60_RS07890	PF04472	Cell division protein SepF
CFN60_RS07895	PF02325	YGGT family
CFN60_RS07900	PF17774	Putative RNA-binding domain in YlmH
CFN60_RS07900	PF01479	S4 domain
CFN60_RS07905	PF05103	DivIVA protein
CFN60_RS07915	PF08264	Anticodon-binding domain of tRNA
CFN60_RS07915	PF00133	tRNA synthetases class I (I, L, M and V)
CFN60_RS07920	PF01258	Prokaryotic dksA/traR C4-type zinc finger
CFN60_RS07925	PF01252	Signal peptidase (SPase) II
CFN60_RS07930	PF00849	RNA pseudouridylate synthase
CFN60_RS07930	PF01479	S4 domain
CFN60_RS07935	PF00156	Phosphoribosyl transferase domain
CFN60_RS07940	PF00860	Permease family
CFN60_RS07945	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CFN60_RS07945	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
CFN60_RS07950	PF01979	Amidohydrolase family
CFN60_RS07955	PF00117	Glutamine amidotransferase class-I
CFN60_RS07955	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
CFN60_RS07960	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CFN60_RS07960	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CFN60_RS07960	PF02142	MGS-like domain
CFN60_RS07965	PF00175	Oxidoreductase NAD-binding domain 
CFN60_RS07965	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
CFN60_RS07970	PF01180	Dihydroorotate dehydrogenase
CFN60_RS07975	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
CFN60_RS07980	PF00156	Phosphoribosyl transferase domain
CFN60_RS07985	PF01507	Phosphoadenosine phosphosulfate reductase family
CFN60_RS07990	PF01384	Phosphate transporter family
CFN60_RS07995	PF01747	ATP-sulfurylase
CFN60_RS07995	PF14306	PUA-like domain
CFN60_RS08005	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CFN60_RS08010	PF01903	CbiX
CFN60_RS08025	PF05670	NFACT protein RNA binding domain
CFN60_RS08030	PF00689	Cation transporting ATPase, C-terminus
CFN60_RS08030	PF00690	Cation transporter/ATPase, N-terminus
CFN60_RS08035	PF03755	YicC-like family, N-terminal region 
CFN60_RS08035	PF08340	Domain of unknown function (DUF1732)
CFN60_RS08040	PF04025	Domain of unknown function (DUF370)
CFN60_RS08045	PF00625	Guanylate kinase
CFN60_RS08050	PF01192	RNA polymerase Rpb6 
CFN60_RS08055	PF04127	DNA / pantothenate metabolism flavoprotein
CFN60_RS08055	PF02441	Flavoprotein
CFN60_RS08060	PF00271	Helicase conserved C-terminal domain
CFN60_RS08060	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
CFN60_RS08060	PF18074	Primosomal protein N C-terminal domain
CFN60_RS08060	PF04851	Type III restriction enzyme, res subunit
CFN60_RS08060	PF17764	3′ DNA-binding domain (3′BD)
CFN60_RS08065	PF01327	Polypeptide deformylase
CFN60_RS08070	PF02911	Formyl transferase, C-terminal domain
CFN60_RS08070	PF00551	Formyl transferase
CFN60_RS08075	PF01029	NusB family
CFN60_RS08075	PF01189	16S rRNA methyltransferase RsmB/F
CFN60_RS08080	PF04055	Radical SAM superfamily
CFN60_RS08090	PF00069	Protein kinase domain
CFN60_RS08090	PF03793	PASTA domain
CFN60_RS08095	PF16745	RsgA N-terminal domain
CFN60_RS08095	PF03193	RsgA GTPase
CFN60_RS08100	PF00834	Ribulose-phosphate 3 epimerase family
CFN60_RS08105	PF04263	Thiamin pyrophosphokinase, catalytic domain
CFN60_RS08105	PF04265	Thiamin pyrophosphokinase, vitamin B1 binding domain
CFN60_RS08110	PF08183	Stage V sporulation protein family
CFN60_RS08115	PF00830	Ribosomal L28 family
CFN60_RS08120	PF03780	Asp23 family, cell envelope-related function
CFN60_RS08125	PF02734	DAK2 domain
CFN60_RS08125	PF13684	Dihydroxyacetone kinase family
CFN60_RS08130	PF01842	ACT domain
CFN60_RS08130	PF03315	Serine dehydratase beta chain
CFN60_RS08135	PF03313	Serine dehydratase alpha chain
CFN60_RS08140	PF17191	RecG wedge domain
CFN60_RS08140	PF00270	DEAD/DEAH box helicase
CFN60_RS08140	PF00271	Helicase conserved C-terminal domain
CFN60_RS08145	PF03061	Thioesterase superfamily
CFN60_RS08150	PF02504	Fatty acid synthesis protein
CFN60_RS08155	PF00698	Acyl transferase domain
CFN60_RS08165	PF00550	Phosphopantetheine attachment site
CFN60_RS08170	PF14622	Ribonuclease-III-like
CFN60_RS08170	PF00035	Double-stranded RNA binding motif
CFN60_RS08175	PF06470	SMC proteins Flexible Hinge Domain
CFN60_RS08175	PF02463	RecF/RecN/SMC N terminal domain
CFN60_RS08180	PF02881	SRP54-type protein, helical bundle domain
CFN60_RS08180	PF00448	SRP54-type protein, GTPase domain
CFN60_RS08190	PF04297	Putative helix-turn-helix protein, YlxM / p13 like
CFN60_RS08195	PF02978	Signal peptide binding domain
CFN60_RS08195	PF02881	SRP54-type protein, helical bundle domain
CFN60_RS08195	PF00448	SRP54-type protein, GTPase domain
CFN60_RS08200	PF00886	Ribosomal protein S16
CFN60_RS08210	PF11068	YlqD protein
CFN60_RS08215	PF05239	PRC-barrel domain
CFN60_RS08215	PF01782	RimM N-terminal domain
CFN60_RS08220	PF01746	tRNA (Guanine-1)-methyltransferase
CFN60_RS08225	PF01245	Ribosomal protein L19
CFN60_RS08230	PF01926	50S ribosome-binding GTPase
CFN60_RS08235	PF01351	Ribonuclease HII
CFN60_RS08245	PF01312	FlhB HrpN YscU SpaS Family
CFN60_RS08250	PF08442	ATP-grasp domain
CFN60_RS08250	PF00549	CoA-ligase
CFN60_RS08255	PF00549	CoA-ligase
CFN60_RS08255	PF02629	CoA binding domain
CFN60_RS08260	PF02481	DNA recombination-mediator protein A
CFN60_RS08265	PF01131	DNA topoisomerase
CFN60_RS08265	PF01751	Toprim domain
CFN60_RS08265	PF01396	Topoisomerase DNA binding C4 zinc finger
CFN60_RS08270	PF01134	Glucose inhibited division protein A
CFN60_RS08275	PF02899	Phage integrase, N-terminal SAM-like domain
CFN60_RS08275	PF00589	Phage integrase family
CFN60_RS08280	PF00227	Proteasome subunit
CFN60_RS08285	PF00004	ATPase family associated with various cellular activities (AAA)
CFN60_RS08285	PF07724	AAA domain (Cdc48 subfamily)
CFN60_RS08285	PF10431	C-terminal, D2-small domain, of ClpB protein 
CFN60_RS08290	PF08222	CodY helix-turn-helix domain
CFN60_RS08290	PF06018	CodY GAF-like domain
CFN60_RS08295	PF00460	Flagella basal body rod protein
CFN60_RS08300	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CFN60_RS08300	PF00460	Flagella basal body rod protein
CFN60_RS08305	PF02049	Flagellar hook-basal body complex protein FliE
CFN60_RS08310	PF01514	Secretory protein of YscJ/FliF family
CFN60_RS08310	PF08345	Flagellar M-ring protein C-terminal
CFN60_RS08315	PF14842	FliG N-terminal domain
CFN60_RS08315	PF14841	FliG middle domain
CFN60_RS08315	PF01706	FliG C-terminal domain
CFN60_RS08320	PF02108	Flagellar assembly protein FliH
CFN60_RS08325	PF18269	T3SS EscN ATPase C-terminal domain
CFN60_RS08325	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CFN60_RS08325	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CFN60_RS08330	PF02050	Flagellar FliJ protein
CFN60_RS08335	PF03448	MgtE intracellular N domain
CFN60_RS08340	PF02120	Flagellar hook-length control protein FliK
CFN60_RS08345	PF03963	Flagellar hook capping protein - N-terminal region
CFN60_RS08350	PF00460	Flagella basal body rod protein
CFN60_RS08350	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CFN60_RS08355	PF06289	Flagellar and Swarming motility proteins
CFN60_RS08360	PF03748	Flagellar basal body-associated protein FliL
CFN60_RS08365	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
CFN60_RS08365	PF02154	Flagellar motor switch protein FliM
CFN60_RS08370	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
CFN60_RS08370	PF04509	CheC-like family
CFN60_RS08375	PF00072	Response regulator receiver domain
CFN60_RS08380	PF04347	Flagellar biosynthesis protein, FliO
CFN60_RS08385	PF00813	FliP family
CFN60_RS08390	PF01313	Bacterial export proteins, family 3
CFN60_RS08395	PF01311	Bacterial export proteins, family 1
CFN60_RS08400	PF01312	FlhB HrpN YscU SpaS Family
CFN60_RS08405	PF00771	FHIPEP family
CFN60_RS08410	PF00448	SRP54-type protein, GTPase domain
CFN60_RS08415	PF10609	NUBPL iron-transfer P-loop NTPase
CFN60_RS08420	PF00072	Response regulator receiver domain
CFN60_RS08420	PF01339	CheB methylesterase
CFN60_RS08425	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS08425	PF02895	Signal transducing histidine kinase, homodimeric domain
CFN60_RS08425	PF01584	CheW-like domain
CFN60_RS08425	PF07194	P2 response regulator binding domain
CFN60_RS08425	PF01627	Hpt domain
CFN60_RS08430	PF01584	CheW-like domain
CFN60_RS08435	PF04509	CheC-like family
CFN60_RS08440	PF03975	CheD chemotactic sensory transduction
CFN60_RS08445	PF04542	Sigma-70 region 2 
CFN60_RS08445	PF04545	Sigma-70, region 4
CFN60_RS08445	PF04539	Sigma-70 region 3
CFN60_RS08455	PF00318	Ribosomal protein S2
CFN60_RS08460	PF00889	Elongation factor TS
CFN60_RS08465	PF00696	Amino acid kinase family
CFN60_RS08470	PF01765	Ribosome recycling factor
CFN60_RS08475	PF01255	Putative undecaprenyl diphosphate synthase
CFN60_RS08485	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
CFN60_RS08485	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
CFN60_RS08485	PF13288	DXP reductoisomerase C-terminal domain
CFN60_RS08490	PF02163	Peptidase family M50
CFN60_RS08490	PF17820	PDZ domain
CFN60_RS08495	PF03129	Anticodon binding domain
CFN60_RS08495	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CFN60_RS08495	PF04073	Aminoacyl-tRNA editing domain
CFN60_RS08500	PF11490	DNA polymerase III polC-type N-terminus II
CFN60_RS08500	PF14579	Helix-hairpin-helix motif
CFN60_RS08500	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
CFN60_RS08500	PF07733	Bacterial DNA polymerase III alpha NTPase domain
CFN60_RS08500	PF02811	PHP domain
CFN60_RS08500	PF00929	Exonuclease
CFN60_RS08500	PF14480	DNA polymerase III polC-type N-terminus I
CFN60_RS08505	PF17384	RimP C-terminal SH3 domain
CFN60_RS08505	PF02576	RimP N-terminal domain
CFN60_RS08510	PF13184	NusA-like KH domain
CFN60_RS08510	PF00575	S1 RNA binding domain
CFN60_RS08510	PF08529	NusA N-terminal domain
CFN60_RS08515	PF04296	Protein of unknown function (DUF448)
CFN60_RS08520	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
CFN60_RS08525	PF00009	Elongation factor Tu GTP binding domain
CFN60_RS08525	PF11987	Translation-initiation factor 2
CFN60_RS08525	PF04760	Translation initiation factor IF-2, N-terminal region
CFN60_RS08530	PF04456	Protein of unknown function (DUF503)
CFN60_RS08535	PF02033	Ribosome-binding factor A
CFN60_RS08540	PF01509	TruB family pseudouridylate synthase (N terminal domain)
CFN60_RS08540	PF16198	tRNA pseudouridylate synthase B C-terminal domain
CFN60_RS08545	PF06574	FAD synthetase
CFN60_RS08545	PF01687	Riboflavin kinase
CFN60_RS08550	PF00312	Ribosomal protein S15
CFN60_RS08555	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
CFN60_RS08555	PF00013	KH domain
CFN60_RS08555	PF03725	3' exoribonuclease family, domain 2
CFN60_RS08555	PF00575	S1 RNA binding domain
CFN60_RS08555	PF01138	3' exoribonuclease family, domain 1
CFN60_RS08560	PF01522	Polysaccharide deacetylase
CFN60_RS08565	PF00675	Insulinase (Peptidase family M16)
CFN60_RS08565	PF05193	Peptidase M16 inactive domain
CFN60_RS08570	PF05239	PRC-barrel domain
CFN60_RS08575	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
CFN60_RS08575	PF16924	Dipicolinate synthase subunit A N-terminal domain
CFN60_RS08580	PF02441	Flavoprotein
CFN60_RS08585	PF02774	Semialdehyde dehydrogenase, dimerisation domain
CFN60_RS08585	PF01118	Semialdehyde dehydrogenase, NAD binding domain
CFN60_RS08590	PF13840	ACT domain 
CFN60_RS08590	PF00696	Amino acid kinase family
CFN60_RS08595	PF00701	Dihydrodipicolinate synthetase family
CFN60_RS08600	PF17770	Ribonuclease J C-terminal domain
CFN60_RS08600	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
CFN60_RS08600	PF00753	Metallo-beta-lactamase superfamily
CFN60_RS08605	PF00574	Clp protease
CFN60_RS08610	PF14035	YlzJ-like protein
CFN60_RS08615	PF01580	FtsK/SpoIIIE family
CFN60_RS08615	PF09397	Ftsk gamma domain
CFN60_RS08615	PF17854	FtsK alpha domain
CFN60_RS08620	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS08620	PF07702	UTRA domain
CFN60_RS08625	PF07690	Major Facilitator Superfamily
CFN60_RS08630	PF01047	MarR family
CFN60_RS08635	PF03176	MMPL family
CFN60_RS08640	PF05193	Peptidase M16 inactive domain
CFN60_RS08645	PF05193	Peptidase M16 inactive domain
CFN60_RS08645	PF00675	Insulinase (Peptidase family M16)
CFN60_RS08655	PF11588	Protein of unknown function (DUF3243)
CFN60_RS08660	PF11868	Protein of unknown function (DUF3388)
CFN60_RS08665	PF13464	Domain of unknown function (DUF4115)
CFN60_RS08670	PF01066	CDP-alcohol phosphatidyltransferase
CFN60_RS08675	PF00994	Probable molybdopterin binding domain
CFN60_RS08675	PF02464	Competence-damaged protein
CFN60_RS08675	PF18146	Damage-inducible protein CinA KH domain
CFN60_RS08680	PF00154	recA bacterial DNA recombination protein
CFN60_RS08685	PF00144	Beta-lactamase
CFN60_RS08690	PF01966	HD domain
CFN60_RS08690	PF00013	KH domain
CFN60_RS08690	PF12072	Domain of unknown function (DUF3552)
CFN60_RS08695	PF13277	YmdB-like protein
CFN60_RS08700	PF04232	Stage V sporulation protein S (SpoVS)
CFN60_RS08705	PF00107	Zinc-binding dehydrogenase
CFN60_RS08705	PF08240	Alcohol dehydrogenase GroES-like domain
CFN60_RS08710	PF00155	Aminotransferase class I and II
CFN60_RS08715	PF01938	TRAM domain
CFN60_RS08715	PF04055	Radical SAM superfamily
CFN60_RS08715	PF00919	Uncharacterized protein family UPF0004
CFN60_RS08720	PF06133	Control of competence regulator ComK, YlbF/YmcA
CFN60_RS08725	PF10628	Outer spore coat protein E (CotE)
CFN60_RS08730	PF05190	MutS family domain IV
CFN60_RS08730	PF05188	MutS domain II
CFN60_RS08730	PF01624	MutS domain I
CFN60_RS08730	PF05192	MutS domain III
CFN60_RS08730	PF00488	MutS domain V
CFN60_RS08735	PF01119	DNA mismatch repair protein, C-terminal domain
CFN60_RS08735	PF08676	MutL C terminal dimerisation domain
CFN60_RS08780	PF00753	Metallo-beta-lactamase superfamily
CFN60_RS08785	PF00698	Acyl transferase domain
CFN60_RS08790	PF00698	Acyl transferase domain
CFN60_RS08795	PF00698	Acyl transferase domain
CFN60_RS08800	PF00550	Phosphopantetheine attachment site
CFN60_RS08805	PF08540	Hydroxymethylglutaryl-coenzyme A synthase C terminal
CFN60_RS08805	PF01154	Hydroxymethylglutaryl-coenzyme A synthase N terminal
CFN60_RS08810	PF00378	Enoyl-CoA hydratase/isomerase
CFN60_RS08815	PF00378	Enoyl-CoA hydratase/isomerase
CFN60_RS08820	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS08820	PF00501	AMP-binding enzyme
CFN60_RS08820	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS08820	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS08820	PF00668	Condensation domain
CFN60_RS08820	PF00550	Phosphopantetheine attachment site
CFN60_RS08820	PF14765	Polyketide synthase dehydratase
CFN60_RS08820	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS08820	PF08659	KR domain
CFN60_RS08825	PF00550	Phosphopantetheine attachment site
CFN60_RS08825	PF14765	Polyketide synthase dehydratase
CFN60_RS08825	PF08659	KR domain
CFN60_RS08825	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS08825	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS08825	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS08830	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS08830	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS08830	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS08830	PF08659	KR domain
CFN60_RS08830	PF08242	Methyltransferase domain
CFN60_RS08830	PF00550	Phosphopantetheine attachment site
CFN60_RS08830	PF14765	Polyketide synthase dehydratase
CFN60_RS08830	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS08830	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS08830	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS08830	PF08659	KR domain
CFN60_RS08830	PF08242	Methyltransferase domain
CFN60_RS08830	PF00550	Phosphopantetheine attachment site
CFN60_RS08830	PF14765	Polyketide synthase dehydratase
CFN60_RS08835	PF14765	Polyketide synthase dehydratase
CFN60_RS08835	PF00550	Phosphopantetheine attachment site
CFN60_RS08835	PF00501	AMP-binding enzyme
CFN60_RS08835	PF08659	KR domain
CFN60_RS08835	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS08835	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS08835	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS08835	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS08835	PF00668	Condensation domain
CFN60_RS08840	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS08840	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS08840	PF14765	Polyketide synthase dehydratase
CFN60_RS08840	PF00550	Phosphopantetheine attachment site
CFN60_RS08840	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS08840	PF08242	Methyltransferase domain
CFN60_RS08840	PF00975	Thioesterase domain
CFN60_RS08845	PF00067	Cytochrome P450
CFN60_RS08850	PF14040	Deoxyribonuclease NucA/NucB
CFN60_RS08855	PF06912	Protein of unknown function (DUF1275)
CFN60_RS08865	PF00082	Subtilase family
CFN60_RS08875	PF05908	Poly-gamma-glutamate hydrolase
CFN60_RS08880	PF02566	OsmC-like protein
CFN60_RS08885	PF00893	Small Multidrug Resistance protein
CFN60_RS08890	PF00893	Small Multidrug Resistance protein
CFN60_RS08900	PF12788	YmaF family
CFN60_RS08910	PF17209	Hfq protein
CFN60_RS08915	PF14157	YmzC-like protein
CFN60_RS08925	PF07972	NrdI Flavodoxin like 
CFN60_RS08930	PF08343	Ribonucleotide reductase N-terminal
CFN60_RS08930	PF00317	Ribonucleotide reductase, all-alpha domain
CFN60_RS08930	PF02867	Ribonucleotide reductase, barrel domain
CFN60_RS08935	PF00268	Ribonucleotide reductase, small chain
CFN60_RS08945	PF01520	N-acetylmuramoyl-L-alanine amidase
CFN60_RS08945	PF05036	Sporulation related domain
CFN60_RS08955	PF17866	AAA lid domain
CFN60_RS08955	PF00004	ATPase family associated with various cellular activities (AAA)
CFN60_RS08960	PF13167	GTP-binding GTPase N-terminal
CFN60_RS08960	PF01926	50S ribosome-binding GTPase
CFN60_RS08960	PF16360	GTP-binding GTPase Middle Region
CFN60_RS08965	PF06838	Methionine gamma-lyase 
CFN60_RS08970	PF13411	MerR HTH family regulatory protein
CFN60_RS08975	PF00120	Glutamine synthetase, catalytic domain
CFN60_RS08975	PF03951	Glutamine synthetase, beta-Grasp domain
CFN60_RS09020	PF04616	Glycosyl hydrolases family 43
CFN60_RS09020	PF17851	Beta xylosidase C-terminal Concanavalin A-like domain 
CFN60_RS09025	PF00480	ROK family
CFN60_RS09030	PF01261	Xylose isomerase-like TIM barrel
CFN60_RS09035	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CFN60_RS09035	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CFN60_RS09040	PF00391	PEP-utilising enzyme, mobile domain
CFN60_RS09040	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
CFN60_RS09070	PF08279	HTH domain
CFN60_RS09070	PF13280	WYL domain
CFN60_RS09075	PF05163	DinB family
CFN60_RS09080	PF08240	Alcohol dehydrogenase GroES-like domain
CFN60_RS09080	PF00107	Zinc-binding dehydrogenase
CFN60_RS09100	PF17094	Uncharacterised protein family (UPF0715)
CFN60_RS09105	PF00583	Acetyltransferase (GNAT) family
CFN60_RS09105	PF14268	YoaP-like
CFN60_RS09110	PF14411	A nuclease of the HNH/ENDO VII superfamily with conserved LHH
CFN60_RS09110	PF04740	LXG domain of WXG superfamily
CFN60_RS09135	PF16302	Domain of unknown function (DUF4944)
CFN60_RS09145	PF13021	Domain of unknown function (DUF3885)
CFN60_RS09155	PF03067	Lytic polysaccharide mono-oxygenase, cellulose-degrading
CFN60_RS09155	PF18416	N-acetylglucosamine binding protein domain 2
CFN60_RS09160	PF09680	Family of unknown function
CFN60_RS09165	PF13302	Acetyltransferase (GNAT) domain
CFN60_RS09175	PF11962	Peptidase_G2, IMC autoproteolytic cleavage domain
CFN60_RS09175	PF12708	Pectate lyase superfamily protein
CFN60_RS09185	PF00692	dUTPase
CFN60_RS09190	PF05908	Poly-gamma-glutamate hydrolase
CFN60_RS09200	PF10710	Protein of unknown function (DUF2512)
CFN60_RS09210	PF01726	LexA DNA binding domain
CFN60_RS09210	PF00717	Peptidase S24-like
CFN60_RS09215	PF01476	LysM domain
CFN60_RS09220	PF00239	Resolvase, N terminal domain
CFN60_RS09225	PF05979	Bacterial protein of unknown function (DUF896)
CFN60_RS09230	PF02779	Transketolase, pyrimidine binding domain
CFN60_RS09230	PF00456	Transketolase, thiamine diphosphate binding domain
CFN60_RS09230	PF02780	Transketolase, C-terminal domain
CFN60_RS09235	PF10747	Sporulation inhibitor of replication protein SirA 
CFN60_RS09240	PF03672	Uncharacterised protein family (UPF0154)
CFN60_RS09245	PF09388	Spo0E like sporulation regulatory protein
CFN60_RS09250	PF02683	Cytochrome C biogenesis protein transmembrane region
CFN60_RS09255	PF00072	Response regulator receiver domain
CFN60_RS09260	PF07301	Protein of unknown function (DUF1453)
CFN60_RS09265	PF11084	Protein of unknown function (DUF2621)
CFN60_RS09275	PF08179	Small acid-soluble spore protein P family
CFN60_RS09285	PF00330	Aconitase family (aconitate hydratase)
CFN60_RS09285	PF00694	Aconitase C-terminal domain
CFN60_RS09290	PF00578	AhpC/TSA family
CFN60_RS09295	PF13040	Fur-regulated basic protein B
CFN60_RS09300	PF08177	Small acid-soluble spore protein N family
CFN60_RS09310	PF03061	Thioesterase superfamily
CFN60_RS09320	PF01521	Iron-sulphur cluster biosynthesis
CFN60_RS09325	PF02660	Glycerol-3-phosphate acyltransferase
CFN60_RS09330	PF13380	CoA binding domain
CFN60_RS09335	PF00986	DNA gyrase B subunit, carboxyl terminus
CFN60_RS09335	PF00204	DNA gyrase B
CFN60_RS09335	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS09335	PF01751	Toprim domain
CFN60_RS09340	PF03989	DNA gyrase C-terminal domain, beta-propeller
CFN60_RS09340	PF00521	DNA gyrase/topoisomerase IV, subunit A
CFN60_RS09350	PF01235	Sodium:alanine symporter family
CFN60_RS09355	PF00294	pfkB family carbohydrate kinase
CFN60_RS09360	PF08240	Alcohol dehydrogenase GroES-like domain
CFN60_RS09360	PF00107	Zinc-binding dehydrogenase
CFN60_RS09365	PF01081	KDPG and KHG aldolase
CFN60_RS09370	PF03786	D-mannonate dehydratase (UxuA)
CFN60_RS09375	PF00106	short chain dehydrogenase
CFN60_RS09380	PF00356	Bacterial regulatory proteins, lacI family
CFN60_RS09385	PF07690	Major Facilitator Superfamily
CFN60_RS09395	PF13761	Domain of unknown function (DUF4166)
CFN60_RS09400	PF14158	YndJ-like protein
CFN60_RS09420	PF00942	Cellulose binding domain
CFN60_RS09420	PF00150	Cellulase (glycosyl hydrolase family 5)
CFN60_RS09430	PF00512	His Kinase A (phospho-acceptor) domain
CFN60_RS09430	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS09435	PF00486	Transcriptional regulatory protein, C terminal
CFN60_RS09435	PF00072	Response regulator receiver domain
CFN60_RS09440	PF17189	Glycosyl hydrolase family 30 beta sandwich domain
CFN60_RS09440	PF02055	Glycosyl hydrolase family 30 TIM-barrel domain
CFN60_RS09445	PF04616	Glycosyl hydrolases family 43
CFN60_RS09445	PF03422	Carbohydrate binding module (family 6)
CFN60_RS09450	PF00501	AMP-binding enzyme
CFN60_RS09450	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS09450	PF00975	Thioesterase domain
CFN60_RS09450	PF00550	Phosphopantetheine attachment site
CFN60_RS09450	PF00668	Condensation domain
CFN60_RS09455	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS09455	PF00550	Phosphopantetheine attachment site
CFN60_RS09455	PF00501	AMP-binding enzyme
CFN60_RS09455	PF00668	Condensation domain
CFN60_RS09460	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS09460	PF00202	Aminotransferase class-III
CFN60_RS09460	PF00501	AMP-binding enzyme
CFN60_RS09460	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS09460	PF00550	Phosphopantetheine attachment site
CFN60_RS09460	PF00668	Condensation domain
CFN60_RS09460	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS09460	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS09465	PF00698	Acyl transferase domain
CFN60_RS09475	PF01144	Coenzyme A transferase
CFN60_RS09480	PF01144	Coenzyme A transferase
CFN60_RS09490	PF00067	Cytochrome P450
CFN60_RS09495	PF06968	Biotin and Thiamin Synthesis associated domain
CFN60_RS09495	PF04055	Radical SAM superfamily
CFN60_RS09505	PF00155	Aminotransferase class I and II
CFN60_RS09510	PF00202	Aminotransferase class-III
CFN60_RS09515	PF03744	6-carboxyhexanoate--CoA ligase
CFN60_RS09520	PF04138	GtrA-like protein
CFN60_RS09525	PF00483	Nucleotidyl transferase
CFN60_RS09530	PF09335	SNARE associated Golgi protein
CFN60_RS09535	PF01039	Carboxyl transferase domain
CFN60_RS09540	PF00378	Enoyl-CoA hydratase/isomerase
CFN60_RS09545	PF00682	HMGL-like
CFN60_RS09550	PF00364	Biotin-requiring enzyme
CFN60_RS09555	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CFN60_RS09555	PF00289	Biotin carboxylase, N-terminal domain
CFN60_RS09555	PF02785	Biotin carboxylase C-terminal domain
CFN60_RS09560	PF00501	AMP-binding enzyme
CFN60_RS09560	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS09565	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
CFN60_RS09565	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
CFN60_RS09565	PF02770	Acyl-CoA dehydrogenase, middle domain
CFN60_RS09570	PF02638	Glycosyl hydrolase-like 10
CFN60_RS09575	PF07098	Protein of unknown function (DUF1360)
CFN60_RS09580	PF00975	Thioesterase domain
CFN60_RS09580	PF00668	Condensation domain
CFN60_RS09580	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS09580	PF00501	AMP-binding enzyme
CFN60_RS09580	PF00550	Phosphopantetheine attachment site
CFN60_RS09585	PF00501	AMP-binding enzyme
CFN60_RS09585	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS09585	PF00668	Condensation domain
CFN60_RS09585	PF00550	Phosphopantetheine attachment site
CFN60_RS09590	PF00668	Condensation domain
CFN60_RS09590	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS09590	PF00501	AMP-binding enzyme
CFN60_RS09590	PF00550	Phosphopantetheine attachment site
CFN60_RS09595	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS09595	PF00501	AMP-binding enzyme
CFN60_RS09595	PF00668	Condensation domain
CFN60_RS09595	PF00550	Phosphopantetheine attachment site
CFN60_RS09600	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS09600	PF00668	Condensation domain
CFN60_RS09600	PF00550	Phosphopantetheine attachment site
CFN60_RS09600	PF00501	AMP-binding enzyme
CFN60_RS09605	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
CFN60_RS09610	PF01263	Aldose 1-epimerase
CFN60_RS09615	PF01554	MatE
CFN60_RS09620	PF16800	IseA DL-endopeptidase inhibitor
CFN60_RS09630	PF00589	Phage integrase family
CFN60_RS09635	PF12728	Helix-turn-helix domain
CFN60_RS09645	PF07690	Major Facilitator Superfamily
CFN60_RS09655	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CFN60_RS09655	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CFN60_RS09655	PF02824	TGS domain
CFN60_RS09655	PF03129	Anticodon binding domain
CFN60_RS09660	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CFN60_RS09660	PF03466	LysR substrate binding domain
CFN60_RS09665	PF08240	Alcohol dehydrogenase GroES-like domain
CFN60_RS09665	PF00107	Zinc-binding dehydrogenase
CFN60_RS09675	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
CFN60_RS09675	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFN60_RS09680	PF00310	Glutamine amidotransferases class-II
CFN60_RS09680	PF04898	Glutamate synthase central domain
CFN60_RS09680	PF01645	Conserved region in glutamate synthase
CFN60_RS09680	PF01493	GXGXG motif
CFN60_RS09685	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CFN60_RS09685	PF03466	LysR substrate binding domain
CFN60_RS09690	PF00696	Amino acid kinase family
CFN60_RS09690	PF01472	PUA domain
CFN60_RS09695	PF03807	NADP oxidoreductase coenzyme F420-dependent
CFN60_RS09695	PF14748	Pyrroline-5-carboxylate reductase dimerisation
CFN60_RS09700	PF02334	Replication terminator protein
CFN60_RS09705	PF00106	short chain dehydrogenase
CFN60_RS09710	PF06103	Bacterial protein of unknown function (DUF948)
CFN60_RS09720	PF07690	Major Facilitator Superfamily
CFN60_RS09725	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CFN60_RS09725	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CFN60_RS09730	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CFN60_RS09730	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CFN60_RS09735	PF00384	Molybdopterin oxidoreductase
CFN60_RS09735	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CFN60_RS09735	PF01568	Molydopterin dinucleotide binding domain
CFN60_RS09765	PF04740	LXG domain of WXG superfamily
CFN60_RS09765	PF14411	A nuclease of the HNH/ENDO VII superfamily with conserved LHH
CFN60_RS09770	PF01588	Putative tRNA binding domain
CFN60_RS09775	PF12833	Helix-turn-helix domain
CFN60_RS09775	PF07883	Cupin domain
CFN60_RS09780	PF00440	Bacterial regulatory proteins, tetR family
CFN60_RS09780	PF13305	Tetracyclin repressor-like, C-terminal domain
CFN60_RS09785	PF00753	Metallo-beta-lactamase superfamily
CFN60_RS09795	PF01022	Bacterial regulatory protein, arsR family
CFN60_RS09805	PF04238	Protein of unknown function (DUF420)
CFN60_RS09810	PF18846	Bacterial archaeo-eukaryotic release factor family 5
CFN60_RS09820	PF17676	LD-carboxypeptidase C-terminal domain
CFN60_RS09820	PF02016	LD-carboxypeptidase N-terminal domain
CFN60_RS09830	PF06725	3D domain
CFN60_RS09830	PF01476	LysM domain
CFN60_RS09835	PF09382	RQC domain
CFN60_RS09835	PF16124	RecQ zinc-binding
CFN60_RS09835	PF00570	HRDC domain
CFN60_RS09835	PF00271	Helicase conserved C-terminal domain
CFN60_RS09835	PF00270	DEAD/DEAH box helicase
CFN60_RS09845	PF02525	Flavodoxin-like fold
CFN60_RS09850	PF01258	Prokaryotic dksA/traR C4-type zinc finger
CFN60_RS09865	PF00011	Hsp20/alpha crystallin family
CFN60_RS09880	PF08000	Bacterial PH domain
CFN60_RS09895	PF00171	Aldehyde dehydrogenase family
CFN60_RS09900	PF13249	Squalene-hopene cyclase N-terminal domain
CFN60_RS09900	PF13243	Squalene-hopene cyclase C-terminal domain
CFN60_RS09905	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
CFN60_RS09905	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
CFN60_RS09910	PF00209	Sodium:neurotransmitter symporter family
CFN60_RS09915	PF01758	Sodium Bile acid symporter family
CFN60_RS09920	PF00753	Metallo-beta-lactamase superfamily
CFN60_RS09925	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CFN60_RS09925	PF00364	Biotin-requiring enzyme
CFN60_RS09925	PF02817	e3 binding domain
CFN60_RS09930	PF02779	Transketolase, pyrimidine binding domain
CFN60_RS09930	PF00676	Dehydrogenase E1 component
CFN60_RS09930	PF16870	2-oxoglutarate dehydrogenase C-terminal
CFN60_RS09935	PF00092	von Willebrand factor type A domain
CFN60_RS09940	PF07728	AAA domain (dynein-related subfamily)
CFN60_RS09945	PF00080	Copper/zinc superoxide dismutase (SODC)
CFN60_RS09945	PF13627	Prokaryotic lipoprotein-attachment site
CFN60_RS09950	PF00877	NlpC/P60 family
CFN60_RS09950	PF01476	LysM domain
CFN60_RS09955	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
CFN60_RS09960	PF02457	DisA bacterial checkpoint controller nucleotide-binding
CFN60_RS09960	PF10372	Bacterial membrane-spanning protein N-terminus
CFN60_RS09965	PF01554	MatE
CFN60_RS09970	PF01740	STAS domain
CFN60_RS09975	PF02585	GlcNAc-PI de-N-acetylase
CFN60_RS09980	PF08830	Protein of unknown function (DUF1806)
CFN60_RS09990	PF00892	EamA-like transporter family
CFN60_RS10005	PF14552	Tautomerase enzyme
CFN60_RS10015	PF01638	HxlR-like helix-turn-helix
CFN60_RS10020	PF00881	Nitroreductase family
CFN60_RS10025	PF01738	Dienelactone hydrolase family
CFN60_RS10030	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CFN60_RS10035	PF11755	Protein of unknown function (DUF3311)
CFN60_RS10040	PF00474	Sodium:solute symporter family
CFN60_RS10050	PF00232	Glycosyl hydrolase family 1
CFN60_RS10055	PF07702	UTRA domain
CFN60_RS10055	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS10060	PF03572	Peptidase family S41
CFN60_RS10060	PF17820	PDZ domain
CFN60_RS10060	PF01471	Putative peptidoglycan binding domain
CFN60_RS10065	PF08241	Methyltransferase domain
CFN60_RS10075	PF02557	D-alanyl-D-alanine carboxypeptidase
CFN60_RS10080	PF01048	Phosphorylase superfamily
CFN60_RS10090	PF14191	YodL-like
CFN60_RS10095	PF01569	PAP2 superfamily
CFN60_RS10100	PF14162	YozD-like protein
CFN60_RS10120	PF06855	YozE SAM-like fold
CFN60_RS10125	PF14122	YokU-like protein, putative antitoxin
CFN60_RS10130	PF12544	Lysine-2,3-aminomutase 
CFN60_RS10135	PF00583	Acetyltransferase (GNAT) family
CFN60_RS10140	PF01546	Peptidase family M20/M25/M40
CFN60_RS10140	PF07687	Peptidase dimerisation domain
CFN60_RS10145	PF01144	Coenzyme A transferase
CFN60_RS10150	PF01144	Coenzyme A transferase
CFN60_RS10155	PF00202	Aminotransferase class-III
CFN60_RS10160	PF06445	GyrI-like small molecule binding domain
CFN60_RS10170	PF00583	Acetyltransferase (GNAT) family
CFN60_RS10175	PF00535	Glycosyl transferase family 2
CFN60_RS10190	PF12996	DUF based on E. rectale Gene description (DUF3880)
CFN60_RS10195	PF02333	Phytase
CFN60_RS10200	PF08485	Polysaccharide biosynthesis protein C-terminal
CFN60_RS10200	PF02719	Polysaccharide biosynthesis protein
CFN60_RS10215	PF11518	Protein of unknown function (DUF3221)
CFN60_RS10225	PF14037	YoqO-like protein
CFN60_RS10235	PF18801	response regulator aspartate phosphatase H, N terminal
CFN60_RS10255	PF16219	Domain of unknown function (DUF4879)
CFN60_RS10265	PF13443	Cro/C1-type HTH DNA-binding domain
CFN60_RS10275	PF01757	Acyltransferase family
CFN60_RS10295	PF18801	response regulator aspartate phosphatase H, N terminal
CFN60_RS10310	PF00753	Metallo-beta-lactamase superfamily
CFN60_RS10320	PF00072	Response regulator receiver domain
CFN60_RS10320	PF00196	Bacterial regulatory proteins, luxR family
CFN60_RS10325	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS10325	PF07730	Histidine kinase
CFN60_RS10330	PF01925	Sulfite exporter TauE/SafE
CFN60_RS10355	PF14411	A nuclease of the HNH/ENDO VII superfamily with conserved LHH
CFN60_RS10355	PF04740	LXG domain of WXG superfamily
CFN60_RS10365	PF05901	Excalibur calcium-binding domain
CFN60_RS10365	PF00565	Staphylococcal nuclease homologue
CFN60_RS10390	PF02719	Polysaccharide biosynthesis protein
CFN60_RS10395	PF01641	SelR domain
CFN60_RS10400	PF01625	Peptide methionine sulfoxide reductase
CFN60_RS10405	PF01047	MarR family
CFN60_RS10410	PF09911	Uncharacterized protein conserved in bacteria (DUF2140)
CFN60_RS10415	PF13472	GDSL-like Lipase/Acylhydrolase family
CFN60_RS10420	PF02630	SCO1/SenC
CFN60_RS10425	PF10751	Protein of unknown function (DUF2535)
CFN60_RS10430	PF00585	C-terminal regulatory domain of Threonine dehydratase
CFN60_RS10430	PF00291	Pyridoxal-phosphate dependent enzyme
CFN60_RS10435	PF00158	Sigma-54 interaction domain
CFN60_RS10435	PF08461	Ribonuclease R winged-helix domain
CFN60_RS10440	PF03006	Haemolysin-III related
CFN60_RS10450	PF00186	Dihydrofolate reductase
CFN60_RS10455	PF00303	Thymidylate synthase
CFN60_RS10460	PF14005	YpjP-like protein
CFN60_RS10465	PF04445	Putative SAM-dependent methyltransferase
CFN60_RS10470	PF06491	Disulphide isomerase
CFN60_RS10475	PF00920	Dehydratase family
CFN60_RS10480	PF08712	Scaffold protein Nfu/NifU N terminal
CFN60_RS10480	PF13769	Virulence factor
CFN60_RS10485	PF01966	HD domain
CFN60_RS10490	PF00255	Glutathione peroxidase
CFN60_RS10495	PF04204	Homoserine O-succinyltransferase 
CFN60_RS10500	PF06925	Monogalactosyldiacylglycerol (MGDG) synthase
CFN60_RS10500	PF00534	Glycosyl transferases group 1
CFN60_RS10505	PF00313	'Cold-shock' DNA-binding domain
CFN60_RS10515	PF10819	Protein of unknown function (DUF2564)     
CFN60_RS10520	PF10782	Zinc-finger
CFN60_RS10525	PF13456	Reverse transcriptase-like
CFN60_RS10530	PF02592	Putative vitamin uptake transporter
CFN60_RS10535	PF13456	Reverse transcriptase-like
CFN60_RS10545	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
CFN60_RS10545	PF01367	5'-3' exonuclease, C-terminal SAM fold
CFN60_RS10555	PF10752	Protein of unknown function (DUF2533) 
CFN60_RS10560	PF00350	Dynamin family
CFN60_RS10565	PF04140	Isoprenylcysteine carboxyl methyltransferase (ICMT) family 
CFN60_RS10570	PF02797	Chalcone and stilbene synthases, C-terminal domain
CFN60_RS10570	PF00195	Chalcone and stilbene synthases, N-terminal domain
CFN60_RS10595	PF00857	Isochorismatase family
CFN60_RS10610	PF00860	Permease family
CFN60_RS10615	PF00156	Phosphoribosyl transferase domain
CFN60_RS10620	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
CFN60_RS10625	PF13307	Helicase C-terminal domain
CFN60_RS10635	PF14139	YpzG-like protein
CFN60_RS10640	PF01170	Putative RNA methylase family UPF0020
CFN60_RS10640	PF02926	THUMP domain
CFN60_RS10650	PF05103	DivIVA protein
CFN60_RS10655	PF06908	YspA SLOG family
CFN60_RS10660	PF11122	Inner spore coat protein D
CFN60_RS10665	PF13482	RNase_H superfamily
CFN60_RS10670	PF00270	DEAD/DEAH box helicase
CFN60_RS10670	PF09369	Domain of unknown function (DUF1998)
CFN60_RS10670	PF00271	Helicase conserved C-terminal domain
CFN60_RS10675	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CFN60_RS10685	PF14179	YppG-like protein
CFN60_RS10690	PF14178	YppF-like protein
CFN60_RS10695	PF08807	Bacterial domain of unknown function (DUF1798)
CFN60_RS10700	PF17522	Family of unknown function (DUF5446)
CFN60_RS10710	PF10720	Protein of unknown function (DUF2515)
CFN60_RS10715	PF03838	Recombination protein U
CFN60_RS10720	PF00905	Penicillin binding protein transpeptidase domain
CFN60_RS10720	PF00912	Transglycosylase
CFN60_RS10730	PF10576	Iron-sulfur binding domain of endonuclease III
CFN60_RS10730	PF00633	Helix-hairpin-helix motif
CFN60_RS10730	PF00730	HhH-GPD superfamily base excision DNA repair protein
CFN60_RS10735	PF07261	Replication initiation and membrane attachment
CFN60_RS10740	PF01336	OB-fold nucleic acid binding domain
CFN60_RS10740	PF00152	tRNA synthetases class II (D, K and N) 
CFN60_RS10745	PF00155	Aminotransferase class I and II
CFN60_RS10750	PF17881	Domain of unknown function (DUF5590)
CFN60_RS10750	PF03413	Peptidase propeptide and YPEB domain
CFN60_RS10755	PF14084	Protein of unknown function (DUF4264)
CFN60_RS10760	PF04851	Type III restriction enzyme, res subunit
CFN60_RS10760	PF13307	Helicase C-terminal domain
CFN60_RS10760	PF00929	Exonuclease
CFN60_RS10765	PF02261	Aspartate decarboxylase
CFN60_RS10770	PF02569	Pantoate-beta-alanine ligase
CFN60_RS10775	PF02548	Ketopantoate hydroxymethyltransferase
CFN60_RS10780	PF08279	HTH domain
CFN60_RS10780	PF03099	Biotin/lipoate A/B protein ligase family
CFN60_RS10780	PF02237	Biotin protein ligase C terminal domain
CFN60_RS10785	PF13735	tRNA nucleotidyltransferase domain 2 putative
CFN60_RS10785	PF12627	Probable RNA and SrmB- binding site of polymerase A
CFN60_RS10785	PF01743	Poly A polymerase head domain
CFN60_RS10790	PF00534	Glycosyl transferases group 1
CFN60_RS10790	PF13439	Glycosyltransferase Family 4
CFN60_RS10795	PF02585	GlcNAc-PI de-N-acetylase
CFN60_RS10800	PF02142	MGS-like domain
CFN60_RS10805	PF01113	Dihydrodipicolinate reductase, N-terminus
CFN60_RS10805	PF05173	Dihydrodipicolinate reductase, C-terminus
CFN60_RS10810	PF03819	MazG nucleotide pyrophosphohydrolase domain
CFN60_RS10815	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CFN60_RS10815	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CFN60_RS10820	PF00190	Cupin
CFN60_RS10825	PF09577	Sporulation protein YpjB (SpoYpjB)
CFN60_RS10830	PF07187	Protein of unknown function (DUF1405)
CFN60_RS10835	PF00032	Cytochrome b(C-terminal)/b6/petD
CFN60_RS10835	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
CFN60_RS10840	PF00033	Cytochrome b/b6/petB
CFN60_RS10845	PF00355	Rieske [2Fe-2S] domain
CFN60_RS10850	PF10673	Protein of unknown function (DUF2487)
CFN60_RS10855	PF08864	UPF0302 domain
CFN60_RS10855	PF08858	IDEAL domain
CFN60_RS10865	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CFN60_RS10870	PF02153	Prephenate dehydrogenase
CFN60_RS10870	PF01842	ACT domain
CFN60_RS10875	PF00155	Aminotransferase class I and II
CFN60_RS10880	PF00290	Tryptophan synthase alpha chain
CFN60_RS10885	PF00291	Pyridoxal-phosphate dependent enzyme
CFN60_RS10890	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
CFN60_RS10895	PF00218	Indole-3-glycerol phosphate synthase
CFN60_RS10900	PF02885	Glycosyl transferase family, helical bundle domain
CFN60_RS10900	PF00591	Glycosyl transferase family, a/b domain
CFN60_RS10905	PF00425	chorismate binding enzyme
CFN60_RS10905	PF04715	Anthranilate synthase component I, N terminal region
CFN60_RS10910	PF07736	Chorismate mutase type I
CFN60_RS10915	PF01761	3-dehydroquinate synthase
CFN60_RS10920	PF01264	Chorismate synthase
CFN60_RS10925	PF01739	CheR methyltransferase, SAM binding domain
CFN60_RS10925	PF03705	CheR methyltransferase, all-alpha domain
CFN60_RS10930	PF00334	Nucleoside diphosphate kinase
CFN60_RS10935	PF00348	Polyprenyl synthetase
CFN60_RS10940	PF01209	ubiE/COQ5 methyltransferase family
CFN60_RS10945	PF07307	Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
CFN60_RS10950	PF02081	Tryptophan RNA-binding attenuator protein
CFN60_RS10955	PF01227	GTP cyclohydrolase I
CFN60_RS10960	PF00216	Bacterial DNA-binding protein
CFN60_RS10965	PF09547	Stage IV sporulation protein A (spore_IV_A)
CFN60_RS10975	PF10966	Protein of unknown function (DUF2768)
CFN60_RS10980	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
CFN60_RS10980	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
CFN60_RS10985	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
CFN60_RS10985	PF01926	50S ribosome-binding GTPase
CFN60_RS10995	PF14140	YpzI-like protein
CFN60_RS11000	PF01070	FMN-dependent dehydrogenase
CFN60_RS11005	PF00575	S1 RNA binding domain
CFN60_RS11010	PF02224	Cytidylate kinase
CFN60_RS11015	PF17313	Family of unknown function (DUF5359)
CFN60_RS11020	PF07238	PilZ domain
CFN60_RS11020	PF12945	Flagellar protein YcgR
CFN60_RS11025	PF03413	Peptidase propeptide and YPEB domain
CFN60_RS11025	PF14620	YpeB sporulation
CFN60_RS11030	PF01471	Putative peptidoglycan binding domain
CFN60_RS11030	PF07486	Cell Wall Hydrolase
CFN60_RS11035	PF13367	PrsW family intramembrane metalloprotease
CFN60_RS11045	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
CFN60_RS11045	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CFN60_RS11050	PF05389	Negative regulator of genetic competence (MecA)
CFN60_RS11055	PF00149	Calcineurin-like phosphoesterase
CFN60_RS11060	PF10864	Protein of unknown function (DUF2663)
CFN60_RS11065	PF01476	LysM domain
CFN60_RS11070	PF02517	CPBP intramembrane metalloprotease
CFN60_RS11075	PF00270	DEAD/DEAH box helicase
CFN60_RS11075	PF00271	Helicase conserved C-terminal domain
CFN60_RS11080	PF14493	Helix-turn-helix domain
CFN60_RS11090	PF12822	ECF transporter, substrate-specific component
CFN60_RS11095	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CFN60_RS11095	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CFN60_RS11095	PF01842	ACT domain
CFN60_RS11105	PF08281	Sigma-70, region 4
CFN60_RS11105	PF04542	Sigma-70 region 2 
CFN60_RS11110	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS11110	PF00512	His Kinase A (phospho-acceptor) domain
CFN60_RS11110	PF00989	PAS fold
CFN60_RS11110	PF00672	HAMP domain
CFN60_RS11110	PF18698	Histidine kinase sensor domain
CFN60_RS11115	PF00486	Transcriptional regulatory protein, C terminal
CFN60_RS11115	PF00072	Response regulator receiver domain
CFN60_RS11120	PF01578	Cytochrome C assembly protein
CFN60_RS11125	PF05140	ResB-like family 
CFN60_RS11130	PF00578	AhpC/TSA family
CFN60_RS11135	PF00849	RNA pseudouridylate synthase
CFN60_RS11135	PF01479	S4 domain
CFN60_RS11140	PF07670	Nucleoside recognition
CFN60_RS11145	PF07670	Nucleoside recognition
CFN60_RS11150	PF00768	D-alanyl-D-alanine carboxypeptidase
CFN60_RS11150	PF07943	Penicillin-binding protein 5, C-terminal domain
CFN60_RS11155	PF13047	Protein of unknown function (DUF3907)
CFN60_RS11160	PF04079	Segregation and condensation complex subunit ScpB
CFN60_RS11165	PF02616	Segregation and condensation protein ScpA
CFN60_RS11175	PF03745	Domain of unknown function (DUF309)
CFN60_RS11185	PF00583	Acetyltransferase (GNAT) family
CFN60_RS11190	PF00885	6,7-dimethyl-8-ribityllumazine synthase
CFN60_RS11195	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
CFN60_RS11195	PF00925	GTP cyclohydrolase II
CFN60_RS11200	PF00677	Lumazine binding domain
CFN60_RS11205	PF01872	RibD C-terminal domain
CFN60_RS11205	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
CFN60_RS11215	PF10502	Signal peptidase, peptidase S26 
CFN60_RS11225	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
CFN60_RS11230	PF06207	Protein of unknown function (DUF1002)
CFN60_RS11235	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
CFN60_RS11235	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
CFN60_RS11240	PF03323	Bacillus/Clostridium GerA spore germination protein
CFN60_RS11245	PF14097	Stage V sporulation protein AE1
CFN60_RS11250	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
CFN60_RS11255	PF07451	Stage V sporulation protein AD (SpoVAD)
CFN60_RS11260	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
CFN60_RS11265	PF13782	Stage V sporulation protein AB
CFN60_RS11270	PF12164	Stage V sporulation protein AA
CFN60_RS11275	PF04542	Sigma-70 region 2 
CFN60_RS11275	PF04539	Sigma-70 region 3
CFN60_RS11275	PF04545	Sigma-70, region 4
CFN60_RS11280	PF13581	Histidine kinase-like ATPase domain
CFN60_RS11285	PF01740	STAS domain
CFN60_RS11290	PF00768	D-alanyl-D-alanine carboxypeptidase
CFN60_RS11290	PF07943	Penicillin-binding protein 5, C-terminal domain
CFN60_RS11295	PF01048	Phosphorylase superfamily
CFN60_RS11300	PF01676	Metalloenzyme superfamily
CFN60_RS11305	PF02899	Phage integrase, N-terminal SAM-like domain
CFN60_RS11305	PF00589	Phage integrase family
CFN60_RS11310	PF14004	Protein of unknown function (DUF4227)
CFN60_RS11315	PF01475	Ferric uptake regulator family
CFN60_RS11320	PF01944	Stage II sporulation protein M
CFN60_RS11335	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CFN60_RS11335	PF00390	Malic enzyme, N-terminal domain
CFN60_RS11335	PF03949	Malic enzyme, NAD binding domain
CFN60_RS11340	PF03553	Na+/H+ antiporter family
CFN60_RS11345	PF00206	Lyase
CFN60_RS11345	PF10415	Fumarase C C-terminus
CFN60_RS11350	PF17763	Glutaminase/Asparaginase C-terminal domain
CFN60_RS11350	PF00710	Asparaginase, N-terminal
CFN60_RS11355	PF01381	Helix-turn-helix
CFN60_RS11365	PF00293	NUDIX domain
CFN60_RS11370	PF13072	Mother cell inhibitor of FtsZ
CFN60_RS11375	PF00248	Aldo/keto reductase family
CFN60_RS11385	PF12146	Serine aminopeptidase, S33
CFN60_RS11390	PF10827	Protein of unknown function (DUF2552) 
CFN60_RS11395	PF01521	Iron-sulphur cluster biosynthesis
CFN60_RS11400	PF04229	GrpB protein
CFN60_RS11400	PF13673	Acetyltransferase (GNAT) domain
CFN60_RS11405	PF03992	Antibiotic biosynthesis monooxygenase
CFN60_RS11410	PF00583	Acetyltransferase (GNAT) family
CFN60_RS11415	PF11799	impB/mucB/samB family C-terminal domain
CFN60_RS11415	PF00817	impB/mucB/samB family
CFN60_RS11420	PF08863	YolD-like protein
CFN60_RS11425	PF14164	YqzH-like protein
CFN60_RS11430	PF01594	AI-2E family transporter
CFN60_RS11445	PF00485	Phosphoribulokinase / Uridine kinase family
CFN60_RS11450	PF00291	Pyridoxal-phosphate dependent enzyme
CFN60_RS11455	PF00106	short chain dehydrogenase
CFN60_RS11460	PF00753	Metallo-beta-lactamase superfamily
CFN60_RS11465	PF03807	NADP oxidoreductase coenzyme F420-dependent
CFN60_RS11465	PF14748	Pyrroline-5-carboxylate reductase dimerisation
CFN60_RS11470	PF00378	Enoyl-CoA hydratase/isomerase
CFN60_RS11475	PF01154	Hydroxymethylglutaryl-coenzyme A synthase N terminal
CFN60_RS11475	PF08540	Hydroxymethylglutaryl-coenzyme A synthase C terminal
CFN60_RS11480	PF00067	Cytochrome P450
CFN60_RS11485	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS11485	PF08659	KR domain
CFN60_RS11485	PF08242	Methyltransferase domain
CFN60_RS11485	PF00550	Phosphopantetheine attachment site
CFN60_RS11485	PF14765	Polyketide synthase dehydratase
CFN60_RS11485	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS11485	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS11490	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS11490	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS11490	PF14765	Polyketide synthase dehydratase
CFN60_RS11490	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS11490	PF08659	KR domain
CFN60_RS11490	PF08242	Methyltransferase domain
CFN60_RS11490	PF00550	Phosphopantetheine attachment site
CFN60_RS11495	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS11495	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS11495	PF14765	Polyketide synthase dehydratase
CFN60_RS11495	PF00501	AMP-binding enzyme
CFN60_RS11495	PF00550	Phosphopantetheine attachment site
CFN60_RS11495	PF00668	Condensation domain
CFN60_RS11495	PF08659	KR domain
CFN60_RS11495	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS11495	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS11500	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS11500	PF00501	AMP-binding enzyme
CFN60_RS11500	PF00668	Condensation domain
CFN60_RS11500	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS11500	PF00550	Phosphopantetheine attachment site
CFN60_RS11500	PF08659	KR domain
CFN60_RS11500	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS11500	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS11500	PF14765	Polyketide synthase dehydratase
CFN60_RS11505	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS11505	PF14765	Polyketide synthase dehydratase
CFN60_RS11505	PF00550	Phosphopantetheine attachment site
CFN60_RS11505	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS11505	PF08242	Methyltransferase domain
CFN60_RS11505	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS11505	PF08659	KR domain
CFN60_RS11510	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS11510	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS11510	PF00501	AMP-binding enzyme
CFN60_RS11510	PF08659	KR domain
CFN60_RS11510	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS11510	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS11510	PF00550	Phosphopantetheine attachment site
CFN60_RS11510	PF00668	Condensation domain
CFN60_RS11510	PF14765	Polyketide synthase dehydratase
CFN60_RS11515	PF14765	Polyketide synthase dehydratase
CFN60_RS11515	PF16197	Ketoacyl-synthetase C-terminal extension
CFN60_RS11515	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFN60_RS11515	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFN60_RS11515	PF08659	KR domain
CFN60_RS11515	PF08242	Methyltransferase domain
CFN60_RS11515	PF00550	Phosphopantetheine attachment site
CFN60_RS11525	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS11525	PF00501	AMP-binding enzyme
CFN60_RS11540	PF03060	Nitronate monooxygenase
CFN60_RS11540	PF00698	Acyl transferase domain
CFN60_RS11550	PF00467	KOW motif
CFN60_RS11550	PF02357	Transcription termination factor nusG
CFN60_RS11560	PF03466	LysR substrate binding domain
CFN60_RS11560	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CFN60_RS11570	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
CFN60_RS11575	PF12146	Serine aminopeptidase, S33
CFN60_RS11580	PF00471	Ribosomal protein L33
CFN60_RS11585	PF12706	Beta-lactamase superfamily domain
CFN60_RS11590	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
CFN60_RS11590	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
CFN60_RS11595	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
CFN60_RS11595	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
CFN60_RS11600	PF11799	impB/mucB/samB family C-terminal domain
CFN60_RS11600	PF11798	IMS family HHH motif
CFN60_RS11600	PF00817	impB/mucB/samB family
CFN60_RS11610	PF02096	60Kd inner membrane protein
CFN60_RS11615	PF07687	Peptidase dimerisation domain
CFN60_RS11615	PF01546	Peptidase family M20/M25/M40
CFN60_RS11620	PF01039	Carboxyl transferase domain
CFN60_RS11630	PF03734	L,D-transpeptidase catalytic domain
CFN60_RS11635	PF06081	Aromatic acid exporter family member 1
CFN60_RS11635	PF11728	Putative aromatic acid exporter C-terminal domain
CFN60_RS11640	PF00005	ABC transporter
CFN60_RS11645	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS11650	PF00497	Bacterial extracellular solute-binding proteins, family 3
CFN60_RS11655	PF06491	Disulphide isomerase
CFN60_RS11660	PF00781	Diacylglycerol kinase catalytic domain
CFN60_RS11665	PF00364	Biotin-requiring enzyme
CFN60_RS11665	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CFN60_RS11665	PF02817	e3 binding domain
CFN60_RS11670	PF02779	Transketolase, pyrimidine binding domain
CFN60_RS11670	PF02780	Transketolase, C-terminal domain
CFN60_RS11675	PF00676	Dehydrogenase E1 component
CFN60_RS11680	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CFN60_RS11680	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFN60_RS11685	PF00871	Acetokinase family
CFN60_RS11690	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
CFN60_RS11690	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CFN60_RS11695	PF01515	Phosphate acetyl/butaryl transferase
CFN60_RS11700	PF02954	Bacterial regulatory protein, Fis family
CFN60_RS11700	PF00989	PAS fold
CFN60_RS11700	PF00158	Sigma-54 interaction domain
CFN60_RS11705	PF11118	Protein of unknown function (DUF2627)
CFN60_RS11715	PF03972	MmgE/PrpD family
CFN60_RS11720	PF00285	Citrate synthase, C-terminal domain
CFN60_RS11725	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
CFN60_RS11725	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
CFN60_RS11725	PF02770	Acyl-CoA dehydrogenase, middle domain
CFN60_RS11730	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
CFN60_RS11730	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
CFN60_RS11735	PF00108	Thiolase, N-terminal domain
CFN60_RS11735	PF02803	Thiolase, C-terminal domain
CFN60_RS11740	PF03009	Glycerophosphoryl diester phosphodiesterase family
CFN60_RS11745	PF01520	N-acetylmuramoyl-L-alanine amidase
CFN60_RS11765	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
CFN60_RS11770	PF10676	Spore germination protein gerPA/gerPF
CFN60_RS11775	PF10676	Spore germination protein gerPA/gerPF
CFN60_RS11780	PF00842	Alanine racemase, C-terminal domain
CFN60_RS11780	PF01168	Alanine racemase, N-terminal domain
CFN60_RS11785	PF08769	Sporulation initiation factor Spo0A C terminal
CFN60_RS11785	PF00072	Response regulator receiver domain
CFN60_RS11790	PF05580	SpoIVB peptidase S55
CFN60_RS11790	PF17820	PDZ domain
CFN60_RS11795	PF13476	AAA domain
CFN60_RS11800	PF02863	Arginine repressor, C-terminal domain
CFN60_RS11800	PF01316	Arginine repressor, DNA binding domain
CFN60_RS11805	PF01728	FtsJ-like methyltransferase
CFN60_RS11805	PF01479	S4 domain
CFN60_RS11810	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
CFN60_RS11810	PF02779	Transketolase, pyrimidine binding domain
CFN60_RS11810	PF02780	Transketolase, C-terminal domain
CFN60_RS11815	PF00348	Polyprenyl synthetase
CFN60_RS11820	PF02609	Exonuclease VII small subunit
CFN60_RS11825	PF13742	OB-fold nucleic acid binding domain
CFN60_RS11825	PF02601	Exonuclease VII, large subunit
CFN60_RS11830	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
CFN60_RS11830	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
CFN60_RS11835	PF01029	NusB family
CFN60_RS11840	PF03780	Asp23 family, cell envelope-related function
CFN60_RS11845	PF02785	Biotin carboxylase C-terminal domain
CFN60_RS11845	PF00289	Biotin carboxylase, N-terminal domain
CFN60_RS11845	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CFN60_RS11850	PF00364	Biotin-requiring enzyme
CFN60_RS11855	PF12685	SpoIIIAH-like protein
CFN60_RS11865	PF09581	Stage III sporulation protein AF (Spore_III_AF)
CFN60_RS11870	PF09546	Stage III sporulation protein AE (spore_III_AE)
CFN60_RS11875	PF06686	Stage III sporulation protein AC/AD protein family
CFN60_RS11880	PF06686	Stage III sporulation protein AC/AD protein family
CFN60_RS11885	PF09548	Stage III sporulation protein AB (spore_III_AB)
CFN60_RS11895	PF10942	Protein of unknown function (DUF2619)
CFN60_RS11900	PF01132	Elongation factor P (EF-P) OB domain
CFN60_RS11900	PF08207	Elongation factor P (EF-P) KOW-like domain
CFN60_RS11900	PF09285	Elongation factor P, C-terminal
CFN60_RS11905	PF01321	Creatinase/Prolidase N-terminal domain
CFN60_RS11905	PF00557	Metallopeptidase family M24
CFN60_RS11910	PF11085	Conserved membrane protein YqhR
CFN60_RS11915	PF07136	Protein of unknown function (DUF1385)
CFN60_RS11925	PF01734	Patatin-like phospholipase
CFN60_RS11930	PF02742	Iron dependent repressor, metal binding and dimerisation domain
CFN60_RS11930	PF01325	Iron dependent repressor, N-terminal DNA binding domain
CFN60_RS11935	PF03099	Biotin/lipoate A/B protein ligase family
CFN60_RS11940	PF00581	Rhodanese-like domain
CFN60_RS11945	PF02347	Glycine cleavage system P-protein
CFN60_RS11950	PF02347	Glycine cleavage system P-protein
CFN60_RS11955	PF01571	Aminomethyltransferase folate-binding domain
CFN60_RS11955	PF08669	Glycine cleavage T-protein C-terminal barrel domain
CFN60_RS11960	PF00176	SNF2 family N-terminal domain
CFN60_RS11960	PF00271	Helicase conserved C-terminal domain
CFN60_RS11965	PF11079	Bacterial protein YqhG of unknown function
CFN60_RS11970	PF08671	Anti-repressor SinI
CFN60_RS11975	PF08671	Anti-repressor SinI
CFN60_RS11975	PF01381	Helix-turn-helix
CFN60_RS11980	PF12389	Camelysin metallo-endopeptidase
CFN60_RS11995	PF13028	Protein of unknown function (DUF3889)
CFN60_RS12000	PF14038	YqzE-like protein
CFN60_RS12005	PF14173	ComG operon protein 7
CFN60_RS12010	PF15980	Putative Competence protein ComGF
CFN60_RS12020	PF07963	Prokaryotic N-terminal methylation motif
CFN60_RS12025	PF07963	Prokaryotic N-terminal methylation motif
CFN60_RS12030	PF00482	Type II secretion system (T2SS), protein F
CFN60_RS12035	PF00437	Type II/IV secretion system protein
CFN60_RS12040	PF01544	CorA-like Mg2+ transporter protein
CFN60_RS12045	PF00571	CBS domain
CFN60_RS12045	PF03471	Transporter associated domain
CFN60_RS12045	PF01595	Cyclin M transmembrane N-terminal domain
CFN60_RS12050	PF14361	RsbT co-antagonist protein rsbRD N-terminal domain
CFN60_RS12050	PF01740	STAS domain
CFN60_RS12060	PF03960	ArsC family
CFN60_RS12065	PF11117	Protein of unknown function (DUF2626)
CFN60_RS12070	PF00753	Metallo-beta-lactamase superfamily
CFN60_RS12075	PF10958	Protein of unknown function (DUF2759)
CFN60_RS12080	PF01910	Thiamine-binding protein
CFN60_RS12090	PF00246	Zinc carboxypeptidase
CFN60_RS12095	PF00480	ROK family
CFN60_RS12100	PF06014	Bacterial protein of unknown function (DUF910)
CFN60_RS12105	PF03553	Na+/H+ antiporter family
CFN60_RS12115	PF01812	5-formyltetrahydrofolate cyclo-ligase family
CFN60_RS12120	PF00471	Ribosomal protein L33
CFN60_RS12135	PF00005	ABC transporter
CFN60_RS12140	PF00005	ABC transporter
CFN60_RS12145	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS12150	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS12155	PF12849	PBP superfamily domain
CFN60_RS12160	PF03717	Penicillin-binding Protein dimerisation domain
CFN60_RS12160	PF00905	Penicillin binding protein transpeptidase domain
CFN60_RS12165	PF07690	Major Facilitator Superfamily
CFN60_RS12170	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
CFN60_RS12170	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
CFN60_RS12175	PF04306	Protein of unknown function (DUF456)
CFN60_RS12180	PF06691	Protein of unknown function (DUF1189)
CFN60_RS12190	PF04551	GcpE protein
CFN60_RS12205	PF01475	Ferric uptake regulator family
CFN60_RS12210	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CFN60_RS12210	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CFN60_RS12215	PF11116	Protein of unknown function (DUF2624)
CFN60_RS12220	PF01261	Xylose isomerase-like TIM barrel
CFN60_RS12225	PF00270	DEAD/DEAH box helicase
CFN60_RS12225	PF00271	Helicase conserved C-terminal domain
CFN60_RS12230	PF14181	YqfQ-like protein
CFN60_RS12235	PF02401	LytB protein
CFN60_RS12240	PF01784	NIF3 (NGG1p interacting factor 3)
CFN60_RS12245	PF04816	tRNA (adenine(22)-N(1))-methyltransferase
CFN60_RS12250	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
CFN60_RS12255	PF03979	Sigma-70 factor, region 1.1
CFN60_RS12255	PF00140	Sigma-70 factor, region 1.2
CFN60_RS12255	PF04542	Sigma-70 region 2 
CFN60_RS12255	PF04545	Sigma-70, region 4
CFN60_RS12255	PF04539	Sigma-70 region 3
CFN60_RS12260	PF10410	DnaB-helicase binding domain of primase
CFN60_RS12260	PF08275	DNA primase catalytic core, N-terminal domain
CFN60_RS12260	PF01807	CHC2 zinc finger
CFN60_RS12265	PF02639	Uncharacterized BCR, YaiI/YqxD family COG1671
CFN60_RS12270	PF03618	Kinase/pyrophosphorylase
CFN60_RS12275	PF00571	CBS domain
CFN60_RS12275	PF08279	HTH domain
CFN60_RS12280	PF02092	Glycyl-tRNA synthetase beta subunit
CFN60_RS12285	PF02091	Glycyl-tRNA synthetase alpha subunit
CFN60_RS12290	PF02565	Recombination protein O C terminal
CFN60_RS12290	PF11967	Recombination protein O N terminal
CFN60_RS12295	PF14006	YqzL-like protein
CFN60_RS12300	PF07650	KH domain
CFN60_RS12300	PF01926	50S ribosome-binding GTPase
CFN60_RS12305	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
CFN60_RS12310	PF01219	Prokaryotic diacylglycerol kinase
CFN60_RS12315	PF02130	Uncharacterized protein family UPF0054
CFN60_RS12320	PF07698	7TM receptor with intracellular HD hydrolase
CFN60_RS12320	PF01966	HD domain
CFN60_RS12320	PF07697	7TM-HD extracellular
CFN60_RS12325	PF02562	PhoH-like protein
CFN60_RS12330	PF06898	Putative stage IV sporulation protein YqfD
CFN60_RS12335	PF07873	YabP family
CFN60_RS12345	PF12127	SigmaW regulon antibacterial
CFN60_RS12350	PF01957	NfeD-like C-terminal, partner-binding
CFN60_RS12350	PF01972	Serine dehydrogenase proteinase
CFN60_RS12355	PF09424	Yqey-like protein
CFN60_RS12360	PF01165	Ribosomal protein S21
CFN60_RS12365	PF02690	Na+/Pi-cotransporter
CFN60_RS12370	PF00919	Uncharacterized protein family UPF0004
CFN60_RS12370	PF04055	Radical SAM superfamily
CFN60_RS12370	PF01938	TRAM domain
CFN60_RS12375	PF04452	RNA methyltransferase
CFN60_RS12385	PF00226	DnaJ domain
CFN60_RS12385	PF00684	DnaJ central domain
CFN60_RS12385	PF01556	DnaJ C terminal domain
CFN60_RS12390	PF00012	Hsp70 protein
CFN60_RS12395	PF01025	GrpE
CFN60_RS12400	PF01628	HrcA protein C terminal domain
CFN60_RS12405	PF04055	Radical SAM superfamily
CFN60_RS12405	PF06969	HemN C-terminal domain
CFN60_RS12410	PF06421	GTP-binding protein LepA C-terminus
CFN60_RS12410	PF03144	Elongation factor Tu domain 2
CFN60_RS12410	PF00009	Elongation factor Tu GTP binding domain
CFN60_RS12410	PF00679	Elongation factor G C-terminus
CFN60_RS12415	PF12438	Protein of unknown function (DUF3679) 
CFN60_RS12420	PF07454	Stage II sporulation protein P (SpoIIP)
CFN60_RS12425	PF03418	Germination protease
CFN60_RS12430	PF01649	Ribosomal protein S20
CFN60_RS12435	PF06144	DNA polymerase III, delta subunit
CFN60_RS12440	PF14141	YqzM-like protein
CFN60_RS12445	PF03772	Competence protein
CFN60_RS12445	PF00753	Metallo-beta-lactamase superfamily
CFN60_RS12445	PF13567	Domain of unknown function (DUF4131)
CFN60_RS12450	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
CFN60_RS12455	PF10531	SLBB domain
CFN60_RS12460	PF03807	NADP oxidoreductase coenzyme F420-dependent
CFN60_RS12460	PF14748	Pyrroline-5-carboxylate reductase dimerisation
CFN60_RS12465	PF13649	Methyltransferase domain
CFN60_RS12475	PF01966	HD domain
CFN60_RS12480	PF01467	Cytidylyltransferase-like
CFN60_RS12485	PF01985	CRS1 / YhbY (CRM) domain
CFN60_RS12490	PF01488	Shikimate / quinate 5-dehydrogenase
CFN60_RS12490	PF08501	Shikimate dehydrogenase substrate binding domain
CFN60_RS12490	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
CFN60_RS12495	PF01926	50S ribosome-binding GTPase
CFN60_RS12505	PF08970	Sporulation inhibitor A
CFN60_RS12510	PF00657	GDSL-like Lipase/Acylhydrolase
CFN60_RS12515	PF01522	Polysaccharide deacetylase
CFN60_RS12520	PF09335	SNARE associated Golgi protein
CFN60_RS12535	PF04545	Sigma-70, region 4
CFN60_RS12535	PF04542	Sigma-70 region 2 
CFN60_RS12555	PF06445	GyrI-like small molecule binding domain
CFN60_RS12555	PF12833	Helix-turn-helix domain
CFN60_RS12560	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CFN60_RS12560	PF03466	LysR substrate binding domain
CFN60_RS12570	PF06146	Phosphate-starvation-inducible E
CFN60_RS12575	PF00512	His Kinase A (phospho-acceptor) domain
CFN60_RS12580	PF00072	Response regulator receiver domain
CFN60_RS12580	PF00486	Transcriptional regulatory protein, C terminal
CFN60_RS12585	PF04235	Protein of unknown function (DUF418)
CFN60_RS12590	PF00583	Acetyltransferase (GNAT) family
CFN60_RS12605	PF07690	Major Facilitator Superfamily
CFN60_RS12620	PF04740	LXG domain of WXG superfamily
CFN60_RS12660	PF00583	Acetyltransferase (GNAT) family
CFN60_RS12665	PF05163	DinB family
CFN60_RS12685	PF01418	Helix-turn-helix domain, rpiR family
CFN60_RS12685	PF01380	SIS domain
CFN60_RS12690	PF01238	Phosphomannose isomerase type I
CFN60_RS12695	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CFN60_RS12695	PF02378	Phosphotransferase system, EIIC 
CFN60_RS12695	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CFN60_RS12700	PF05043	Mga helix-turn-helix domain
CFN60_RS12700	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CFN60_RS12700	PF00874	PRD domain
CFN60_RS12700	PF08279	HTH domain
CFN60_RS12705	PF12706	Beta-lactamase superfamily domain
CFN60_RS12710	PF04073	Aminoacyl-tRNA editing domain
CFN60_RS12715	PF03466	LysR substrate binding domain
CFN60_RS12715	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CFN60_RS12720	PF07690	Major Facilitator Superfamily
CFN60_RS12725	PF00258	Flavodoxin
CFN60_RS12725	PF00667	FAD binding domain
CFN60_RS12725	PF00175	Oxidoreductase NAD-binding domain 
CFN60_RS12725	PF00067	Cytochrome P450
CFN60_RS12730	PF16295	Tetracyclin repressor-like, C-terminal domain
CFN60_RS12730	PF00440	Bacterial regulatory proteins, tetR family
CFN60_RS12735	PF08241	Methyltransferase domain
CFN60_RS12740	PF09501	Probable sporulation protein (Bac_small_yrzI)
CFN60_RS12750	PF01226	Formate/nitrite transporter
CFN60_RS12755	PF10057	Uncharacterized conserved protein (DUF2294)
CFN60_RS12760	PF00037	4Fe-4S binding domain
CFN60_RS12760	PF00384	Molybdopterin oxidoreductase
CFN60_RS12760	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CFN60_RS12760	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CFN60_RS12760	PF01568	Molydopterin dinucleotide binding domain
CFN60_RS12765	PF07849	Protein of unknown function (DUF1641)
CFN60_RS12770	PF14143	YrhC-like protein
CFN60_RS12775	PF01053	Cys/Met metabolism PLP-dependent enzyme
CFN60_RS12780	PF00291	Pyridoxal-phosphate dependent enzyme
CFN60_RS12785	PF01048	Phosphorylase superfamily
CFN60_RS12790	PF13649	Methyltransferase domain
CFN60_RS12795	PF10750	Protein of unknown function (DUF2536)
CFN60_RS12800	PF07423	Domain of unknown function (DUF1510)
CFN60_RS12805	PF03717	Penicillin-binding Protein dimerisation domain
CFN60_RS12805	PF00905	Penicillin binding protein transpeptidase domain
CFN60_RS12810	PF01272	Transcription elongation factor, GreA/GreB, C-term
CFN60_RS12810	PF03449	Transcription elongation factor, N-terminal
CFN60_RS12815	PF00485	Phosphoribulokinase / Uridine kinase family
CFN60_RS12820	PF01136	Peptidase family U32
CFN60_RS12820	PF16325	Peptidase family U32 C-terminal domain
CFN60_RS12825	PF01136	Peptidase family U32
CFN60_RS12830	PF01596	O-methyltransferase
CFN60_RS12835	PF02618	YceG-like family
CFN60_RS12840	PF06949	Protein of unknown function (DUF1292)
CFN60_RS12845	PF03652	Holliday junction resolvase
CFN60_RS12850	PF06135	IreB regulatory phosphoprotein
CFN60_RS12855	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CFN60_RS12855	PF01411	tRNA synthetases class II (A)
CFN60_RS12855	PF02272	DHHA1 domain
CFN60_RS12860	PF01594	AI-2E family transporter
CFN60_RS12865	PF00005	ABC transporter
CFN60_RS12870	PF00497	Bacterial extracellular solute-binding proteins, family 3
CFN60_RS12875	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS12880	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS12885	PF13056	Protein of unknown function (DUF3918)
CFN60_RS12895	PF05239	PRC-barrel domain
CFN60_RS12900	PF13538	UvrD-like helicase C-terminal domain
CFN60_RS12900	PF14490	Helix-hairpin-helix containing domain
CFN60_RS12900	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
CFN60_RS12905	PF07719	Tetratricopeptide repeat
CFN60_RS12905	PF13181	Tetratricopeptide repeat
CFN60_RS12915	PF00266	Aminotransferase class-V
CFN60_RS12920	PF02082	Transcriptional regulator
CFN60_RS12925	PF05496	Holliday junction DNA helicase RuvB P-loop domain
CFN60_RS12925	PF12002	MgsA AAA+ ATPase C terminal
CFN60_RS12925	PF16193	AAA C-terminal domain
CFN60_RS12930	PF00899	ThiF family
CFN60_RS12940	PF01336	OB-fold nucleic acid binding domain
CFN60_RS12940	PF02938	GAD domain
CFN60_RS12940	PF00152	tRNA synthetases class II (D, K and N) 
CFN60_RS12945	PF13393	Histidyl-tRNA synthetase
CFN60_RS12945	PF03129	Anticodon binding domain
CFN60_RS12950	PF17449	Uncharacterized YrzK-like
CFN60_RS12955	PF01520	N-acetylmuramoyl-L-alanine amidase
CFN60_RS12955	PF08239	Bacterial SH3 domain
CFN60_RS12960	PF02580	D-Tyr-tRNA(Tyr) deacylase
CFN60_RS12965	PF02824	TGS domain
CFN60_RS12965	PF04607	Region found in RelA / SpoT proteins
CFN60_RS12965	PF13291	ACT domain
CFN60_RS12970	PF00156	Phosphoribosyl transferase domain
CFN60_RS12975	PF02272	DHHA1 domain
CFN60_RS12975	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
CFN60_RS12975	PF17768	RecJ OB domain
CFN60_RS12975	PF01368	DHH family
CFN60_RS12980	PF06305	Lipopolysaccharide assembly protein A domain
CFN60_RS12985	PF02080	TrkA-C domain
CFN60_RS12990	PF07549	SecD/SecF GG Motif
CFN60_RS12990	PF02355	Protein export membrane protein
CFN60_RS12995	PF13797	Post-transcriptional regulator
CFN60_RS13000	PF14667	Polysaccharide biosynthesis C-terminal domain
CFN60_RS13000	PF01943	Polysaccharide biosynthesis protein
CFN60_RS13005	PF04239	Protein of unknown function (DUF421)
CFN60_RS13010	PF12670	Protein of unknown function (DUF3792)
CFN60_RS13015	PF02699	Preprotein translocase subunit
CFN60_RS13020	PF01702	Queuine tRNA-ribosyltransferase
CFN60_RS13025	PF02547	Queuosine biosynthesis protein
CFN60_RS13030	PF11146	Protein of unknown function (DUF2905)
CFN60_RS13035	PF17864	RuvB AAA lid domain
CFN60_RS13035	PF05491	RuvB C-terminal winged helix domain
CFN60_RS13035	PF05496	Holliday junction DNA helicase RuvB P-loop domain
CFN60_RS13040	PF07499	RuvA, C-terminal domain
CFN60_RS13040	PF01330	RuvA N terminal domain
CFN60_RS13045	PF08977	Bypass of Forespore C, N terminal
CFN60_RS13045	PF08955	BofC C-terminal domain
CFN60_RS13055	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
CFN60_RS13060	PF01476	LysM domain
CFN60_RS13065	PF02445	Quinolinate synthetase A protein
CFN60_RS13070	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
CFN60_RS13070	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
CFN60_RS13075	PF02910	Fumarate reductase flavoprotein C-term
CFN60_RS13075	PF00890	FAD binding domain
CFN60_RS13080	PF00266	Aminotransferase class-V
CFN60_RS13085	PF08279	HTH domain
CFN60_RS13085	PF02829	3H domain
CFN60_RS13090	PF00800	Prephenate dehydratase
CFN60_RS13090	PF01842	ACT domain
CFN60_RS13095	PF01842	ACT domain
CFN60_RS13100	PF01926	50S ribosome-binding GTPase
CFN60_RS13100	PF09269	Domain of unknown function (DUF1967)
CFN60_RS13100	PF01018	GTP1/OBG
CFN60_RS13105	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
CFN60_RS13105	PF14682	Sporulation initiation phospho-transferase B, C-terminal
CFN60_RS13110	PF01016	Ribosomal L27 protein
CFN60_RS13115	PF04327	Cysteine protease Prp
CFN60_RS13120	PF00829	Ribosomal prokaryotic L21 protein
CFN60_RS13125	PF02163	Peptidase family M50
CFN60_RS13130	PF01551	Peptidase family M23
CFN60_RS13135	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
CFN60_RS13140	PF03775	Septum formation inhibitor MinC, C-terminal domain
CFN60_RS13145	PF04093	rod shape-determining protein MreD
CFN60_RS13150	PF04085	rod shape-determining protein MreC
CFN60_RS13160	PF04002	RadC-like JAB domain
CFN60_RS13165	PF02545	Maf-like protein
CFN60_RS13170	PF05036	Sporulation related domain
CFN60_RS13175	PF06750	Bacterial Peptidase A24 N-terminal domain
CFN60_RS13175	PF01478	Type IV leader peptidase family
CFN60_RS13180	PF08245	Mur ligase middle domain
CFN60_RS13180	PF02875	Mur ligase family, glutamate ligase domain
CFN60_RS13185	PF00133	tRNA synthetases class I (I, L, M and V)
CFN60_RS13185	PF08264	Anticodon-binding domain of tRNA
CFN60_RS13185	PF10458	Valyl tRNA synthetase tRNA binding arm
CFN60_RS13200	PF01476	LysM domain
CFN60_RS13205	PF00202	Aminotransferase class-III
CFN60_RS13210	PF00490	Delta-aminolevulinic acid dehydratase
CFN60_RS13215	PF02602	Uroporphyrinogen-III synthase HemD
CFN60_RS13220	PF03900	Porphobilinogen deaminase, C-terminal domain
CFN60_RS13220	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
CFN60_RS13225	PF01578	Cytochrome C assembly protein
CFN60_RS13230	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
CFN60_RS13230	PF01488	Shikimate / quinate 5-dehydrogenase
CFN60_RS13230	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
CFN60_RS13240	PF01926	50S ribosome-binding GTPase
CFN60_RS13245	PF05362	Lon protease (S16) C-terminal proteolytic domain
CFN60_RS13245	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
CFN60_RS13245	PF00004	ATPase family associated with various cellular activities (AAA)
CFN60_RS13250	PF00004	ATPase family associated with various cellular activities (AAA)
CFN60_RS13250	PF05362	Lon protease (S16) C-terminal proteolytic domain
CFN60_RS13255	PF10431	C-terminal, D2-small domain, of ClpB protein 
CFN60_RS13255	PF07724	AAA domain (Cdc48 subfamily)
CFN60_RS13255	PF06689	ClpX C4-type zinc finger
CFN60_RS13260	PF05698	Bacterial trigger factor protein (TF) C-terminus
CFN60_RS13260	PF05697	Bacterial trigger factor protein (TF)
CFN60_RS13260	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
CFN60_RS13270	PF00694	Aconitase C-terminal domain
CFN60_RS13275	PF00330	Aconitase family (aconitate hydratase)
CFN60_RS13280	PF00180	Isocitrate/isopropylmalate dehydrogenase
CFN60_RS13285	PF00682	HMGL-like
CFN60_RS13285	PF08502	LeuA allosteric (dimerisation) domain
CFN60_RS13290	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
CFN60_RS13290	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
CFN60_RS13295	PF10369	Small subunit of acetolactate synthase
CFN60_RS13295	PF01842	ACT domain
CFN60_RS13300	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CFN60_RS13300	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CFN60_RS13300	PF00205	Thiamine pyrophosphate enzyme, central domain
CFN60_RS13320	PF01420	Type I restriction modification DNA specificity domain
CFN60_RS13325	PF02384	N-6 DNA Methylase
CFN60_RS13330	PF08463	EcoEI R protein C-terminal
CFN60_RS13330	PF00271	Helicase conserved C-terminal domain
CFN60_RS13330	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
CFN60_RS13330	PF04851	Type III restriction enzyme, res subunit
CFN60_RS13355	PF12850	Calcineurin-like phosphoesterase superfamily domain
CFN60_RS13360	PF01725	Ham1 family
CFN60_RS13365	PF03725	3' exoribonuclease family, domain 2
CFN60_RS13365	PF01138	3' exoribonuclease family, domain 1
CFN60_RS13370	PF10646	Sporulation and spore germination
CFN60_RS13375	PF01177	Asp/Glu/Hydantoin racemase
CFN60_RS13380	PF01047	MarR family
CFN60_RS13385	PF00196	Bacterial regulatory proteins, luxR family
CFN60_RS13390	PF03061	Thioesterase superfamily
CFN60_RS13395	PF13085	2Fe-2S iron-sulfur cluster binding domain
CFN60_RS13395	PF13183	4Fe-4S dicluster domain
CFN60_RS13400	PF02910	Fumarate reductase flavoprotein C-term
CFN60_RS13400	PF00890	FAD binding domain
CFN60_RS13405	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
CFN60_RS13410	PF10702	Protein of unknown function (DUF2507)
CFN60_RS13415	PF13840	ACT domain 
CFN60_RS13415	PF01842	ACT domain
CFN60_RS13415	PF00696	Amino acid kinase family
CFN60_RS13425	PF08459	UvrC Helix-hairpin-helix N-terminal
CFN60_RS13425	PF02151	UvrB/uvrC motif
CFN60_RS13425	PF01541	GIY-YIG catalytic domain
CFN60_RS13430	PF00085	Thioredoxin
CFN60_RS13435	PF06964	Alpha-L-arabinofuranosidase C-terminal domain
CFN60_RS13440	PF00766	Electron transfer flavoprotein FAD-binding domain
CFN60_RS13440	PF01012	Electron transfer flavoprotein domain
CFN60_RS13465	PF10924	Protein of unknown function (DUF2711)
CFN60_RS13470	PF03994	Domain of Unknown Function (DUF350) 
CFN60_RS13480	PF14716	Helix-hairpin-helix domain
CFN60_RS13480	PF14791	DNA polymerase beta thumb 
CFN60_RS13480	PF02811	PHP domain
CFN60_RS13485	PF02674	Colicin V production protein
CFN60_RS13490	PF05164	Cell division protein ZapA
CFN60_RS13495	PF11858	Domain of unknown function (DUF3378)
CFN60_RS13495	PF01351	Ribonuclease HII
CFN60_RS13500	PF03147	Ferredoxin-fold anticodon binding domain
CFN60_RS13500	PF03484	tRNA synthetase B5 domain
CFN60_RS13500	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
CFN60_RS13500	PF01588	Putative tRNA binding domain
CFN60_RS13500	PF03483	B3/4 domain
CFN60_RS13505	PF01409	tRNA synthetases class II core domain (F)
CFN60_RS13505	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
CFN60_RS13510	PF08032	RNA 2'-O ribose methyltransferase substrate binding
CFN60_RS13510	PF00588	SpoU rRNA Methylase family
CFN60_RS13515	PF14098	Small, acid-soluble spore protein I
CFN60_RS13520	PF17853	GGDEF-like domain
CFN60_RS13520	PF13556	PucR C-terminal helix-turn-helix domain
CFN60_RS13520	PF05651	Putative sugar diacid recognition
CFN60_RS13525	PF02913	FAD linked oxidases, C-terminal domain
CFN60_RS13525	PF01565	FAD binding domain 
CFN60_RS13530	PF02754	Cysteine-rich domain
CFN60_RS13530	PF13183	4Fe-4S dicluster domain
CFN60_RS13535	PF13722	5TM C-terminal transporter carbon starvation CstA
CFN60_RS13535	PF02554	Carbon starvation protein CstA
CFN60_RS13540	PF06964	Alpha-L-arabinofuranosidase C-terminal domain
CFN60_RS13545	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS13550	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS13555	PF01547	Bacterial extracellular solute-binding protein
CFN60_RS13560	PF13685	Iron-containing alcohol dehydrogenase
CFN60_RS13565	PF13344	Haloacid dehalogenase-like hydrolase
CFN60_RS13570	PF00596	Class II Aldolase and Adducin N-terminal domain
CFN60_RS13575	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CFN60_RS13575	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CFN60_RS13580	PF02610	L-arabinose isomerase
CFN60_RS13580	PF11762	L-arabinose isomerase C-terminal domain
CFN60_RS13585	PF04616	Glycosyl hydrolases family 43
CFN60_RS13590	PF05343	M42 glutamyl aminopeptidase
CFN60_RS13600	PF06961	Protein of unknown function (DUF1294)
CFN60_RS13605	PF00453	Ribosomal protein L20
CFN60_RS13610	PF01632	Ribosomal protein L35
CFN60_RS13615	PF05198	Translation initiation factor IF-3, N-terminal domain
CFN60_RS13615	PF00707	Translation initiation factor IF-3, C-terminal domain
CFN60_RS13620	PF04172	LrgB-like family 
CFN60_RS13625	PF03788	LrgA family
CFN60_RS13630	PF00072	Response regulator receiver domain
CFN60_RS13630	PF04397	LytTr DNA-binding domain
CFN60_RS13635	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS13635	PF07694	5TMR of 5TMR-LYT
CFN60_RS13635	PF06580	Histidine kinase
CFN60_RS13645	PF13419	Haloacid dehalogenase-like hydrolase
CFN60_RS13650	PF03129	Anticodon binding domain
CFN60_RS13650	PF02824	TGS domain
CFN60_RS13650	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CFN60_RS13650	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CFN60_RS13655	PF08812	YtxC-like family
CFN60_RS13660	PF09335	SNARE associated Golgi protein
CFN60_RS13665	PF01695	IstB-like ATP binding protein
CFN60_RS13665	PF07319	Primosomal protein DnaI N-terminus
CFN60_RS13670	PF07261	Replication initiation and membrane attachment
CFN60_RS13675	PF03477	ATP cone domain
CFN60_RS13680	PF02675	S-adenosylmethionine decarboxylase 
CFN60_RS13685	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
CFN60_RS13685	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CFN60_RS13690	PF01638	HxlR-like helix-turn-helix
CFN60_RS13695	PF07690	Major Facilitator Superfamily
CFN60_RS13700	PF00248	Aldo/keto reductase family
CFN60_RS13705	PF01121	Dephospho-CoA kinase
CFN60_RS13710	PF02659	Putative manganese efflux pump
CFN60_RS13715	PF06827	Zinc finger found in FPG and IleRS
CFN60_RS13715	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
CFN60_RS13715	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
CFN60_RS13720	PF00476	DNA polymerase family A
CFN60_RS13720	PF01367	5'-3' exonuclease, C-terminal SAM fold
CFN60_RS13720	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
CFN60_RS13725	PF00989	PAS fold
CFN60_RS13725	PF00512	His Kinase A (phospho-acceptor) domain
CFN60_RS13725	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS13725	PF16736	Single Cache-like 
CFN60_RS13730	PF00072	Response regulator receiver domain
CFN60_RS13730	PF00486	Transcriptional regulatory protein, C terminal
CFN60_RS13735	PF00056	lactate/malate dehydrogenase, NAD binding domain
CFN60_RS13735	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CFN60_RS13740	PF00180	Isocitrate/isopropylmalate dehydrogenase
CFN60_RS13745	PF00285	Citrate synthase, C-terminal domain
CFN60_RS13750	PF18801	response regulator aspartate phosphatase H, N terminal
CFN60_RS13750	PF13176	Tetratricopeptide repeat
CFN60_RS13760	PF01510	N-acetylmuramoyl-L-alanine amidase
CFN60_RS13760	PF01471	Putative peptidoglycan binding domain
CFN60_RS13765	PF11208	Protein of unknown function (DUF2992)
CFN60_RS13775	PF04284	Protein of unknown function (DUF441)
CFN60_RS13780	PF01594	AI-2E family transporter
CFN60_RS13785	PF04186	FxsA cytoplasmic membrane protein 
CFN60_RS13790	PF00391	PEP-utilising enzyme, mobile domain
CFN60_RS13790	PF00224	Pyruvate kinase, barrel domain
CFN60_RS13790	PF02887	Pyruvate kinase, alpha/beta domain
CFN60_RS13795	PF00365	Phosphofructokinase
CFN60_RS13800	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
CFN60_RS13805	PF17848	Acetyl-coA carboxylase zinc finger domain
CFN60_RS13805	PF01039	Carboxyl transferase domain
CFN60_RS13810	PF03949	Malic enzyme, NAD binding domain
CFN60_RS13810	PF00390	Malic enzyme, N-terminal domain
CFN60_RS13815	PF07733	Bacterial DNA polymerase III alpha NTPase domain
CFN60_RS13815	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
CFN60_RS13815	PF14579	Helix-hairpin-helix motif
CFN60_RS13815	PF02811	PHP domain
CFN60_RS13815	PF01336	OB-fold nucleic acid binding domain
CFN60_RS13820	PF14034	Sporulation protein YtrH
CFN60_RS13835	PF01368	DHH family
CFN60_RS13835	PF02272	DHHA1 domain
CFN60_RS13840	PF14007	YtpI-like protein
CFN60_RS13845	PF07085	DRTGG domain
CFN60_RS13845	PF00571	CBS domain
CFN60_RS13845	PF03061	Thioesterase superfamily
CFN60_RS13845	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS13865	PF14698	Argininosuccinate lyase C-terminal
CFN60_RS13865	PF00206	Lyase
CFN60_RS13870	PF00764	Arginosuccinate synthase
CFN60_RS13875	PF00994	Probable molybdopterin binding domain
CFN60_RS13880	PF00871	Acetokinase family
CFN60_RS13885	PF02384	N-6 DNA Methylase
CFN60_RS13890	PF08534	Redoxin
CFN60_RS13895	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
CFN60_RS13900	PF11167	Protein of unknown function (DUF2953)
CFN60_RS13905	PF06271	RDD family
CFN60_RS13910	PF01343	Peptidase family S49
CFN60_RS13915	PF01513	ATP-NAD kinase
CFN60_RS13920	PF07969	Amidohydrolase family
CFN60_RS13925	PF00501	AMP-binding enzyme
CFN60_RS13925	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS13930	PF00269	Small, acid-soluble spore proteins, alpha/beta type
CFN60_RS13935	PF02568	Thiamine biosynthesis protein (ThiI)
CFN60_RS13935	PF02926	THUMP domain
CFN60_RS13940	PF00266	Aminotransferase class-V
CFN60_RS13945	PF05525	Branched-chain amino acid transport protein
CFN60_RS13950	PF06160	Septation ring formation regulator, EzrA 
CFN60_RS13955	PF02811	PHP domain
CFN60_RS13960	PF00440	Bacterial regulatory proteins, tetR family
CFN60_RS13965	PF13185	GAF domain
CFN60_RS13970	PF00990	Diguanylate cyclase, GGDEF domain
CFN60_RS13980	PF00163	Ribosomal protein S4/S9 N-terminal domain
CFN60_RS13980	PF01479	S4 domain
CFN60_RS13985	PF00171	Aldehyde dehydrogenase family
CFN60_RS14000	PF03796	DnaB-like helicase C terminal domain
CFN60_RS14000	PF00772	DnaB-like helicase N terminal domain
CFN60_RS14005	PF00175	Oxidoreductase NAD-binding domain 
CFN60_RS14005	PF00042	Globin
CFN60_RS14005	PF00970	Oxidoreductase FAD-binding domain
CFN60_RS14015	PF01965	DJ-1/PfpI family
CFN60_RS14030	PF01545	Cation efflux family
CFN60_RS14030	PF16916	Dimerisation domain of Zinc Transporter
CFN60_RS14035	PF11495	Archaeal transcriptional regulator TrmB
CFN60_RS14035	PF01978	Sugar-specific transcriptional regulator TrmB
CFN60_RS14050	PF01479	S4 domain
CFN60_RS14050	PF00579	tRNA synthetases class I (W and Y)
CFN60_RS14060	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS14060	PF00501	AMP-binding enzyme
CFN60_RS14065	PF00583	Acetyltransferase (GNAT) family
CFN60_RS14070	PF00571	CBS domain
CFN60_RS14075	PF00850	Histone deacetylase domain
CFN60_RS14080	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
CFN60_RS14080	PF00691	OmpA family
CFN60_RS14085	PF01618	MotA/TolQ/ExbB proton channel family
CFN60_RS14090	PF00356	Bacterial regulatory proteins, lacI family
CFN60_RS14095	PF01817	Chorismate mutase type II
CFN60_RS14095	PF00793	DAHP synthetase I family
CFN60_RS14100	PF11009	Protein of unknown function (DUF2847)
CFN60_RS14105	PF12732	YtxH-like protein
CFN60_RS14110	PF06103	Bacterial protein of unknown function (DUF948)
CFN60_RS14115	PF02875	Mur ligase family, glutamate ligase domain
CFN60_RS14115	PF01225	Mur ligase family, catalytic domain
CFN60_RS14115	PF08245	Mur ligase middle domain
CFN60_RS14120	PF17854	FtsK alpha domain
CFN60_RS14120	PF09397	Ftsk gamma domain
CFN60_RS14120	PF01580	FtsK/SpoIIIE family
CFN60_RS14125	PF14794	Domain of unknown function (DUF4479)
CFN60_RS14125	PF01588	Putative tRNA binding domain
CFN60_RS14130	PF07285	Protein of unknown function (DUF1444)
CFN60_RS14135	PF00085	Thioredoxin
CFN60_RS14140	PF11071	Nucleoside 2-deoxyribosyltransferase YtoQ
CFN60_RS14145	PF05343	M42 glutamyl aminopeptidase
CFN60_RS14150	PF03413	Peptidase propeptide and YPEB domain
CFN60_RS14155	PF00390	Malic enzyme, N-terminal domain
CFN60_RS14155	PF03949	Malic enzyme, NAD binding domain
CFN60_RS14160	PF00753	Metallo-beta-lactamase superfamily
CFN60_RS14165	PF02390	Putative methyltransferase 
CFN60_RS14170	PF14165	YtzH-like protein
CFN60_RS14175	PF01636	Phosphotransferase enzyme family
CFN60_RS14180	PF00781	Diacylglycerol kinase catalytic domain
CFN60_RS14195	PF00291	Pyridoxal-phosphate dependent enzyme
CFN60_RS14200	PF01546	Peptidase family M20/M25/M40
CFN60_RS14205	PF00860	Permease family
CFN60_RS14210	PF05975	Bacterial ABC transporter protein EcsB
CFN60_RS14215	PF00005	ABC transporter
CFN60_RS14220	PF08220	DeoR-like helix-turn-helix domain
CFN60_RS14225	PF00849	RNA pseudouridylate synthase
CFN60_RS14225	PF01479	S4 domain
CFN60_RS14230	PF01943	Polysaccharide biosynthesis protein
CFN60_RS14230	PF14667	Polysaccharide biosynthesis C-terminal domain
CFN60_RS14240	PF02028	BCCT, betaine/carnitine/choline family transporter
CFN60_RS14245	PF10957	Sporulation protein Cse60 
CFN60_RS14250	PF00356	Bacterial regulatory proteins, lacI family
CFN60_RS14255	PF01547	Bacterial extracellular solute-binding protein
CFN60_RS14260	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS14265	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS14270	PF11975	Family 4 glycosyl hydrolase C-terminal domain
CFN60_RS14270	PF02056	Family 4 glycosyl hydrolase
CFN60_RS14280	PF00581	Rhodanese-like domain
CFN60_RS14285	PF13603	Leucyl-tRNA synthetase, Domain 2
CFN60_RS14285	PF00133	tRNA synthetases class I (I, L, M and V)
CFN60_RS14285	PF09334	tRNA synthetases class I (M)
CFN60_RS14285	PF08264	Anticodon-binding domain of tRNA
CFN60_RS14290	PF14074	Protein of unknown function (DUF4257)
CFN60_RS14295	PF13426	PAS domain
CFN60_RS14295	PF01740	STAS domain
CFN60_RS14300	PF07690	Major Facilitator Superfamily
CFN60_RS14305	PF09529	Integral membrane protein (intg_mem_TP0381)
CFN60_RS14310	PF02687	FtsX-like permease family
CFN60_RS14315	PF00005	ABC transporter
CFN60_RS14320	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS14325	PF00486	Transcriptional regulatory protein, C terminal
CFN60_RS14325	PF00072	Response regulator receiver domain
CFN60_RS14330	PF12704	MacB-like periplasmic core domain
CFN60_RS14330	PF02687	FtsX-like permease family
CFN60_RS14335	PF00005	ABC transporter
CFN60_RS14355	PF00005	ABC transporter
CFN60_RS14360	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS14365	PF10732	Protein of unknown function (DUF2524)
CFN60_RS14370	PF16199	Radical_SAM C-terminal domain
CFN60_RS14370	PF04055	Radical SAM superfamily
CFN60_RS14375	PF06962	Putative rRNA methylase
CFN60_RS14385	PF03009	Glycerophosphoryl diester phosphodiesterase family
CFN60_RS14390	PF10776	Protein of unknown function (DUF2600)
CFN60_RS14395	PF12146	Serine aminopeptidase, S33
CFN60_RS14400	PF00132	Bacterial transferase hexapeptide (six repeats)
CFN60_RS14405	PF00324	Amino acid permease
CFN60_RS14410	PF00733	Asparagine synthase
CFN60_RS14410	PF13537	Glutamine amidotransferase domain
CFN60_RS14415	PF02772	S-adenosylmethionine synthetase, central domain
CFN60_RS14415	PF02773	S-adenosylmethionine synthetase, C-terminal domain
CFN60_RS14415	PF00438	S-adenosylmethionine synthetase, N-terminal domain
CFN60_RS14420	PF01293	Phosphoenolpyruvate carboxykinase
CFN60_RS14425	PF10763	Protein of unknown function (DUF2584)
CFN60_RS14430	PF00326	Prolyl oligopeptidase family
CFN60_RS14440	PF00005	ABC transporter
CFN60_RS14445	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS14450	PF00293	NUDIX domain
CFN60_RS14455	PF05105	Bacteriophage holin family 
CFN60_RS14460	PF00210	Ferritin-like domain
CFN60_RS14470	PF13115	YtkA-like
CFN60_RS14475	PF02664	S-Ribosylhomocysteinase (LuxS)
CFN60_RS14480	PF01809	Putative membrane protein insertion efficiency factor
CFN60_RS14485	PF00484	Carbonic anhydrase
CFN60_RS14490	PF01197	Ribosomal protein L31
CFN60_RS14495	PF01654	Cytochrome bd terminal oxidase subunit I
CFN60_RS14500	PF02322	Cytochrome bd terminal oxidase subunit II
CFN60_RS14505	PF07561	Domain of Unknown Function (DUF1540)
CFN60_RS14510	PF00950	ABC 3 transport family
CFN60_RS14515	PF00950	ABC 3 transport family
CFN60_RS14520	PF00005	ABC transporter
CFN60_RS14525	PF01297	Zinc-uptake complex component A periplasmic
CFN60_RS14530	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
CFN60_RS14530	PF13378	Enolase C-terminal domain-like
CFN60_RS14535	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS14535	PF00501	AMP-binding enzyme
CFN60_RS14540	PF00378	Enoyl-CoA hydratase/isomerase
CFN60_RS14545	PF00561	alpha/beta hydrolase fold
CFN60_RS14550	PF16582	Middle domain of thiamine pyrophosphate
CFN60_RS14550	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CFN60_RS14550	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CFN60_RS14555	PF00425	chorismate binding enzyme
CFN60_RS14560	PF01258	Prokaryotic dksA/traR C4-type zinc finger
CFN60_RS14565	PF03073	TspO/MBR family
CFN60_RS14690	PF09515	Thiamine transporter protein (Thia_YuaJ)
CFN60_RS14695	PF01145	SPFH domain / Band 7 family
CFN60_RS14695	PF15975	Flotillin
CFN60_RS14705	PF12867	DinB superfamily
CFN60_RS14715	PF00465	Iron-containing alcohol dehydrogenase 
CFN60_RS14720	PF00171	Aldehyde dehydrogenase family
CFN60_RS14730	PF17735	Biofilm surface layer A
CFN60_RS14735	PF02254	TrkA-N domain
CFN60_RS14735	PF02080	TrkA-C domain
CFN60_RS14740	PF13457	GW (Gly-Tryp) dipeptide domain
CFN60_RS14740	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CFN60_RS14745	PF00970	Oxidoreductase FAD-binding domain
CFN60_RS14745	PF00175	Oxidoreductase NAD-binding domain 
CFN60_RS14745	PF00042	Globin
CFN60_RS14765	PF02673	Bacitracin resistance protein BacA
CFN60_RS14770	PF01594	AI-2E family transporter
CFN60_RS14775	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CFN60_RS14775	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CFN60_RS14780	PF01965	DJ-1/PfpI family
CFN60_RS14785	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFN60_RS14785	PF00672	HAMP domain
CFN60_RS14785	PF02743	Cache domain
CFN60_RS14790	PF02743	Cache domain
CFN60_RS14790	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFN60_RS14790	PF00672	HAMP domain
CFN60_RS14795	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFN60_RS14795	PF00672	HAMP domain
CFN60_RS14795	PF02743	Cache domain
CFN60_RS14800	PF00672	HAMP domain
CFN60_RS14800	PF02743	Cache domain
CFN60_RS14800	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFN60_RS14815	PF03060	Nitronate monooxygenase
CFN60_RS14820	PF01894	Uncharacterised protein family UPF0047
CFN60_RS14825	PF00128	Alpha amylase, catalytic domain
CFN60_RS14825	PF16657	Maltogenic Amylase, C-terminal domain
CFN60_RS14830	PF03471	Transporter associated domain
CFN60_RS14830	PF00571	CBS domain
CFN60_RS14830	PF01595	Cyclin M transmembrane N-terminal domain
CFN60_RS14835	PF04298	Putative neutral zinc metallopeptidase
CFN60_RS14845	PF11458	Membrane-integrating protein Mistic
CFN60_RS14850	PF02254	TrkA-N domain
CFN60_RS14850	PF07885	Ion channel
CFN60_RS14855	PF08868	YugN-like family
CFN60_RS14865	PF00342	Phosphoglucose isomerase
CFN60_RS14875	PF03358	NADPH-dependent FMN reductase
CFN60_RS14880	PF00857	Isochorismatase family
CFN60_RS14885	PF00465	Iron-containing alcohol dehydrogenase 
CFN60_RS14890	PF00465	Iron-containing alcohol dehydrogenase 
CFN60_RS14895	PF04070	Domain of unknown function (DUF378)
CFN60_RS14900	PF00575	S1 RNA binding domain
CFN60_RS14905	PF00155	Aminotransferase class I and II
CFN60_RS14910	PF01037	Lrp/AsnC ligand binding domain
CFN60_RS14915	PF08386	TAP-like protein
CFN60_RS14915	PF00561	alpha/beta hydrolase fold
CFN60_RS14920	PF08958	Domain of unknown function (DUF1871)
CFN60_RS14925	PF00155	Aminotransferase class I and II
CFN60_RS14930	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS14930	PF00512	His Kinase A (phospho-acceptor) domain
CFN60_RS14935	PF08810	Kinase associated protein B
CFN60_RS14940	PF00929	Exonuclease
CFN60_RS14945	PF07690	Major Facilitator Superfamily
CFN60_RS14950	PF00905	Penicillin binding protein transpeptidase domain
CFN60_RS14950	PF00912	Transglycosylase
CFN60_RS14955	PF04134	Protein of unknown function, DUF393
CFN60_RS14960	PF17328	Family of unknown function (DUF5366)
CFN60_RS14965	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
CFN60_RS14965	PF17203	Single cache domain 3
CFN60_RS14965	PF00989	PAS fold
CFN60_RS14965	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS14970	PF00072	Response regulator receiver domain
CFN60_RS14975	PF02608	ABC transporter substrate-binding protein PnrA-like
CFN60_RS14980	PF00005	ABC transporter
CFN60_RS14985	PF02653	Branched-chain amino acid transport system / permease component
CFN60_RS14990	PF02653	Branched-chain amino acid transport system / permease component
CFN60_RS15000	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
CFN60_RS15000	PF00361	Proton-conducting membrane transporter
CFN60_RS15000	PF13244	Domain of unknown function (DUF4040)
CFN60_RS15005	PF04039	Domain related to MnhB subunit of Na+/H+ antiporter
CFN60_RS15010	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
CFN60_RS15015	PF00361	Proton-conducting membrane transporter
CFN60_RS15020	PF01899	Na+/H+ ion antiporter subunit
CFN60_RS15025	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
CFN60_RS15030	PF03334	Na+/H+ antiporter subunit
CFN60_RS15035	PF03061	Thioesterase superfamily
CFN60_RS15040	PF00196	Bacterial regulatory proteins, luxR family
CFN60_RS15040	PF00072	Response regulator receiver domain
CFN60_RS15045	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS15045	PF07730	Histidine kinase
CFN60_RS15050	PF05952	Bacillus competence pheromone ComX
CFN60_RS15055	PF00348	Polyprenyl synthetase
CFN60_RS15060	PF08181	DegQ (SacQ) family
CFN60_RS15075	PF08668	HDOD domain
CFN60_RS15075	PF00563	EAL domain
CFN60_RS15080	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
CFN60_RS15080	PF17956	Nicotinate phosphoribosyltransferase C-terminal domain
CFN60_RS15080	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
CFN60_RS15085	PF00857	Isochorismatase family
CFN60_RS15090	PF07997	Protein of unknown function (DUF1694)
CFN60_RS15095	PF14166	YueH-like protein
CFN60_RS15100	PF10676	Spore germination protein gerPA/gerPF
CFN60_RS15105	PF01594	AI-2E family transporter
CFN60_RS15110	PF10842	Protein of unknown function (DUF2642)
CFN60_RS15115	PF01966	HD domain
CFN60_RS15120	PF00106	short chain dehydrogenase
CFN60_RS15125	PF17355	Family of unknown function (DUF5383)
CFN60_RS15135	PF01580	FtsK/SpoIIIE family
CFN60_RS15135	PF12538	DNA transporter 
CFN60_RS15140	PF10140	WXG100 protein secretion system (Wss), protein YukC
CFN60_RS15145	PF08817	WXG100 protein secretion system (Wss), protein YukD
CFN60_RS15150	PF06013	Proteins of 100 residues with WXG
CFN60_RS15155	PF13556	PucR C-terminal helix-turn-helix domain
CFN60_RS15155	PF06018	CodY GAF-like domain
CFN60_RS15155	PF17853	GGDEF-like domain
CFN60_RS15160	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
CFN60_RS15160	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
CFN60_RS15165	PF10042	Uncharacterized conserved protein (DUF2278)
CFN60_RS15170	PF03621	MbtH-like protein
CFN60_RS15175	PF00550	Phosphopantetheine attachment site
CFN60_RS15175	PF00501	AMP-binding enzyme
CFN60_RS15175	PF00975	Thioesterase domain
CFN60_RS15175	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS15175	PF00668	Condensation domain
CFN60_RS15180	PF00857	Isochorismatase family
CFN60_RS15180	PF00550	Phosphopantetheine attachment site
CFN60_RS15185	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS15185	PF00501	AMP-binding enzyme
CFN60_RS15190	PF00425	chorismate binding enzyme
CFN60_RS15195	PF00106	short chain dehydrogenase
CFN60_RS15200	PF00756	Putative esterase
CFN60_RS15205	PF00174	Oxidoreductase molybdopterin binding domain
CFN60_RS15210	PF02632	BioY family
CFN60_RS15215	PF13726	Na+-H+ antiporter family
CFN60_RS15215	PF03553	Na+/H+ antiporter family
CFN60_RS15220	PF00883	Cytosol aminopeptidase family, catalytic domain
CFN60_RS15220	PF02789	Cytosol aminopeptidase family, N-terminal domain
CFN60_RS15225	PF02681	Divergent PAP2 family
CFN60_RS15230	PF06725	3D domain
CFN60_RS15235	PF14068	Putative membrane protein
CFN60_RS15240	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFN60_RS15250	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFN60_RS15255	PF00478	IMP dehydrogenase / GMP reductase domain
CFN60_RS15270	PF00005	ABC transporter
CFN60_RS15280	PF09221	Bacteriocin class IId cyclical uberolysin-like
CFN60_RS15290	PF13302	Acetyltransferase (GNAT) domain
CFN60_RS15295	PF00106	short chain dehydrogenase
CFN60_RS15300	PF01521	Iron-sulphur cluster biosynthesis
CFN60_RS15305	PF01678	Diaminopimelate epimerase
CFN60_RS15310	PF01773	Na+ dependent nucleoside transporter N-terminus
CFN60_RS15310	PF07662	Na+ dependent nucleoside transporter C-terminus
CFN60_RS15315	PF07293	Protein of unknown function (DUF1450)
CFN60_RS15320	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFN60_RS15325	PF07315	Protein of unknown function (DUF1462)
CFN60_RS15330	PF01106	NifU-like domain
CFN60_RS15335	PF00326	Prolyl oligopeptidase family
CFN60_RS15335	PF07676	WD40-like Beta Propeller Repeat
CFN60_RS15340	PF08544	GHMP kinases C terminal 
CFN60_RS15340	PF00288	GHMP kinases N terminal domain
CFN60_RS15345	PF00291	Pyridoxal-phosphate dependent enzyme
CFN60_RS15350	PF03447	Homoserine dehydrogenase, NAD binding domain
CFN60_RS15350	PF01842	ACT domain
CFN60_RS15350	PF00742	Homoserine dehydrogenase
CFN60_RS15360	PF04608	Phosphatidylglycerophosphatase A
CFN60_RS15365	PF13344	Haloacid dehalogenase-like hydrolase
CFN60_RS15370	PF01934	Protein of unknown function DUF86
CFN60_RS15375	PF06265	Protein of unknown function (DUF1027)
CFN60_RS15385	PF04055	Radical SAM superfamily
CFN60_RS15385	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
CFN60_RS15390	PF01551	Peptidase family M23
CFN60_RS15395	PF09560	Sporulation protein YunB (Spo_YunB)
CFN60_RS15400	PF02872	5'-nucleotidase, C-terminal domain
CFN60_RS15405	PF01925	Sulfite exporter TauE/SafE
CFN60_RS15410	PF01904	Protein of unknown function DUF72
CFN60_RS15420	PF01979	Amidohydrolase family
CFN60_RS15425	PF07905	Purine catabolism regulatory protein-like family
CFN60_RS15425	PF17853	GGDEF-like domain
CFN60_RS15425	PF13556	PucR C-terminal helix-turn-helix domain
CFN60_RS15430	PF13176	Tetratricopeptide repeat
CFN60_RS15430	PF18801	response regulator aspartate phosphatase H, N terminal
CFN60_RS15445	PF07690	Major Facilitator Superfamily
CFN60_RS15450	PF00266	Aminotransferase class-V
CFN60_RS15455	PF01546	Peptidase family M20/M25/M40
CFN60_RS15460	PF04231	Endonuclease I
CFN60_RS15465	PF00005	ABC transporter
CFN60_RS15465	PF17912	MalK OB fold domain
CFN60_RS15465	PF03459	TOBE domain
CFN60_RS15470	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS15470	PF07702	UTRA domain
CFN60_RS15475	PF00294	pfkB family carbohydrate kinase
CFN60_RS15480	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS15485	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS15490	PF01547	Bacterial extracellular solute-binding protein
CFN60_RS15495	PF01380	SIS domain
CFN60_RS15500	PF13411	MerR HTH family regulatory protein
CFN60_RS15515	PF17418	Sporulation delaying protein SdpA
CFN60_RS15520	PF07853	Protein of unknown function (DUF1648)
CFN60_RS15525	PF01541	GIY-YIG catalytic domain
CFN60_RS15530	PF01266	FAD dependent oxidoreductase
CFN60_RS15545	PF10903	Protein of unknown function (DUF2691)
CFN60_RS15555	PF01374	Glycosyl hydrolase family 46
CFN60_RS15560	PF01458	Uncharacterized protein family (UPF0051)
CFN60_RS15565	PF01592	NifU-like N terminal domain
CFN60_RS15570	PF00266	Aminotransferase class-V
CFN60_RS15575	PF01458	Uncharacterized protein family (UPF0051)
CFN60_RS15580	PF00005	ABC transporter
CFN60_RS15590	PF02627	Carboxymuconolactone decarboxylase family
CFN60_RS15595	PF03180	NLPA lipoprotein
CFN60_RS15600	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS15605	PF00005	ABC transporter
CFN60_RS15605	PF09383	NIL domain
CFN60_RS15610	PF02036	SCP-2 sterol transfer family
CFN60_RS15615	PF00085	Thioredoxin
CFN60_RS15620	PF01751	Toprim domain
CFN60_RS15625	PF10830	Protein of unknown function (DUF2553)
CFN60_RS15630	PF01597	Glycine cleavage H-protein
CFN60_RS15635	PF03960	ArsC family
CFN60_RS15640	PF02770	Acyl-CoA dehydrogenase, middle domain
CFN60_RS15640	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
CFN60_RS15640	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
CFN60_RS15645	PF00108	Thiolase, N-terminal domain
CFN60_RS15645	PF02803	Thiolase, C-terminal domain
CFN60_RS15650	PF00378	Enoyl-CoA hydratase/isomerase
CFN60_RS15650	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
CFN60_RS15650	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
CFN60_RS15655	PF14115	YuzL-like protein
CFN60_RS15660	PF01619	Proline dehydrogenase
CFN60_RS15670	PF07875	Coat F domain
CFN60_RS15675	PF01047	MarR family
CFN60_RS15680	PF07690	Major Facilitator Superfamily
CFN60_RS15685	PF03466	LysR substrate binding domain
CFN60_RS15685	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CFN60_RS15690	PF06314	Acetoacetate decarboxylase (ADC)
CFN60_RS15700	PF10835	Protein of unknown function (DUF2573)
CFN60_RS15705	PF00005	ABC transporter
CFN60_RS15710	PF14039	YusW-like protein
CFN60_RS15720	PF00106	short chain dehydrogenase
CFN60_RS15725	PF00210	Ferritin-like domain
CFN60_RS15730	PF13180	PDZ domain
CFN60_RS15735	PF00486	Transcriptional regulatory protein, C terminal
CFN60_RS15735	PF00072	Response regulator receiver domain
CFN60_RS15740	PF00512	His Kinase A (phospho-acceptor) domain
CFN60_RS15740	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS15740	PF00672	HAMP domain
CFN60_RS15750	PF00440	Bacterial regulatory proteins, tetR family
CFN60_RS15755	PF00206	Lyase
CFN60_RS15755	PF10415	Fumarase C C-terminus
CFN60_RS15760	PF13113	Protein of unknown function (DUF3970)
CFN60_RS15765	PF03323	Bacillus/Clostridium GerA spore germination protein
CFN60_RS15770	PF03845	Spore germination protein
CFN60_RS15775	PF05504	Spore germination B3/ GerAC like, C-terminal 
CFN60_RS15780	PF00072	Response regulator receiver domain
CFN60_RS15780	PF00196	Bacterial regulatory proteins, luxR family
CFN60_RS15785	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS15785	PF07730	Histidine kinase
CFN60_RS15785	PF00672	HAMP domain
CFN60_RS15790	PF09922	Cell wall-active antibiotics response 4TMS YvqF
CFN60_RS15795	PF13349	Putative adhesin
CFN60_RS15800	PF04012	PspA/IM30 family
CFN60_RS15810	PF07690	Major Facilitator Superfamily
CFN60_RS15815	PF01923	Cobalamin adenosyltransferase
CFN60_RS15820	PF00005	ABC transporter
CFN60_RS15825	PF01032	FecCD transport family
CFN60_RS15830	PF01497	Periplasmic binding protein
CFN60_RS15835	PF00106	short chain dehydrogenase
CFN60_RS15840	PF08450	SMP-30/Gluconolactonase/LRE-like region
CFN60_RS15845	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS15845	PF00512	His Kinase A (phospho-acceptor) domain
CFN60_RS15850	PF00072	Response regulator receiver domain
CFN60_RS15850	PF00486	Transcriptional regulatory protein, C terminal
CFN60_RS15860	PF04545	Sigma-70, region 4
CFN60_RS15865	PF12841	YvrJ protein family
CFN60_RS15870	PF00190	Cupin
CFN60_RS15875	PF14184	Regulatory protein YrvL
CFN60_RS15880	PF00005	ABC transporter
CFN60_RS15885	PF01032	FecCD transport family
CFN60_RS15890	PF01032	FecCD transport family
CFN60_RS15895	PF01497	Periplasmic binding protein
CFN60_RS15900	PF01053	Cys/Met metabolism PLP-dependent enzyme
CFN60_RS15915	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
CFN60_RS15915	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFN60_RS15920	PF00085	Thioredoxin
CFN60_RS15925	PF01597	Glycine cleavage H-protein
CFN60_RS15930	PF03449	Transcription elongation factor, N-terminal
CFN60_RS15930	PF01272	Transcription elongation factor, GreA/GreB, C-term
CFN60_RS15945	PF02627	Carboxymuconolactone decarboxylase family
CFN60_RS15950	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFN60_RS15955	PF00085	Thioredoxin
CFN60_RS15965	PF00085	Thioredoxin
CFN60_RS15975	PF01597	Glycine cleavage H-protein
CFN60_RS15985	PF16925	Tetracyclin repressor-like, C-terminal domain
CFN60_RS15985	PF00440	Bacterial regulatory proteins, tetR family
CFN60_RS15990	PF04072	Leucine carboxyl methyltransferase
CFN60_RS15995	PF13520	Amino acid permease
CFN60_RS16005	PF09575	Small spore protein J (Spore_SspJ)
CFN60_RS16010	PF04307	LexA-binding, inner membrane-associated putative hydrolase
CFN60_RS16015	PF00884	Sulfatase
CFN60_RS16020	PF12728	Helix-turn-helix domain
CFN60_RS16020	PF12727	PBP superfamily domain
CFN60_RS16030	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS16035	PF00196	Bacterial regulatory proteins, luxR family
CFN60_RS16035	PF00072	Response regulator receiver domain
CFN60_RS16040	PF07730	Histidine kinase
CFN60_RS16040	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
CFN60_RS16040	PF00672	HAMP domain
CFN60_RS16040	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS16045	PF00005	ABC transporter
CFN60_RS16060	PF00248	Aldo/keto reductase family
CFN60_RS16070	PF00999	Sodium/hydrogen exchanger family
CFN60_RS16080	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
CFN60_RS16080	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
CFN60_RS16085	PF00175	Oxidoreductase NAD-binding domain 
CFN60_RS16085	PF00258	Flavodoxin
CFN60_RS16085	PF00667	FAD binding domain
CFN60_RS16090	PF13538	UvrD-like helicase C-terminal domain
CFN60_RS16095	PF03458	UPF0126 domain
CFN60_RS16105	PF02600	Disulfide bond formation protein DsbB
CFN60_RS16110	PF13462	Thioredoxin
CFN60_RS16115	PF00403	Heavy-metal-associated domain
CFN60_RS16120	PF00403	Heavy-metal-associated domain
CFN60_RS16125	PF00403	Heavy-metal-associated domain
CFN60_RS16130	PF02583	Metal-sensitive transcriptional repressor
CFN60_RS16135	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CFN60_RS16135	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CFN60_RS16140	PF02525	Flavodoxin-like fold
CFN60_RS16145	PF00296	Luciferase-like monooxygenase
CFN60_RS16150	PF00462	Glutaredoxin
CFN60_RS16155	PF00296	Luciferase-like monooxygenase
CFN60_RS16160	PF00005	ABC transporter
CFN60_RS16165	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS16170	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS16175	PF00497	Bacterial extracellular solute-binding proteins, family 3
CFN60_RS16180	PF00497	Bacterial extracellular solute-binding proteins, family 3
CFN60_RS16185	PF00583	Acetyltransferase (GNAT) family
CFN60_RS16190	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CFN60_RS16190	PF03466	LysR substrate binding domain
CFN60_RS16195	PF00106	short chain dehydrogenase
CFN60_RS16200	PF01337	Barstar (barnase inhibitor)
CFN60_RS16205	PF01337	Barstar (barnase inhibitor)
CFN60_RS16215	PF01668	SmpB protein
CFN60_RS16220	PF00575	S1 RNA binding domain
CFN60_RS16220	PF17876	Cold shock domain
CFN60_RS16220	PF08206	Ribonuclease B OB domain
CFN60_RS16220	PF00773	RNB domain
CFN60_RS16225	PF12146	Serine aminopeptidase, S33
CFN60_RS16230	PF03840	Preprotein translocase SecG subunit
CFN60_RS16235	PF01381	Helix-turn-helix
CFN60_RS16250	PF01638	HxlR-like helix-turn-helix
CFN60_RS16255	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS16255	PF00512	His Kinase A (phospho-acceptor) domain
CFN60_RS16260	PF00072	Response regulator receiver domain
CFN60_RS16260	PF00486	Transcriptional regulatory protein, C terminal
CFN60_RS16275	PF00005	ABC transporter
CFN60_RS16280	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS16285	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
CFN60_RS16290	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS16295	PF00005	ABC transporter
CFN60_RS16295	PF00571	CBS domain
CFN60_RS16300	PF12802	MarR family
CFN60_RS16305	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS16310	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
CFN60_RS16315	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS16320	PF00571	CBS domain
CFN60_RS16320	PF00005	ABC transporter
CFN60_RS16325	PF12802	MarR family
CFN60_RS16330	PF01914	MarC family integral membrane protein
CFN60_RS16345	PF13240	zinc-ribbon domain
CFN60_RS16350	PF00583	Acetyltransferase (GNAT) family
CFN60_RS16355	PF03952	Enolase, N-terminal domain
CFN60_RS16355	PF00113	Enolase, C-terminal TIM barrel domain
CFN60_RS16360	PF01676	Metalloenzyme superfamily
CFN60_RS16360	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
CFN60_RS16365	PF00121	Triosephosphate isomerase
CFN60_RS16370	PF00162	Phosphoglycerate kinase
CFN60_RS16380	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
CFN60_RS16380	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CFN60_RS16385	PF04198	Putative sugar-binding domain
CFN60_RS16390	PF00083	Sugar (and other) transporter
CFN60_RS16395	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS16400	PF00296	Luciferase-like monooxygenase
CFN60_RS16405	PF03466	LysR substrate binding domain
CFN60_RS16405	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CFN60_RS16410	PF00892	EamA-like transporter family
CFN60_RS16415	PF00324	Amino acid permease
CFN60_RS16420	PF01418	Helix-turn-helix domain, rpiR family
CFN60_RS16420	PF01380	SIS domain
CFN60_RS16425	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CFN60_RS16425	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CFN60_RS16430	PF02447	GntP family permease
CFN60_RS16435	PF02589	LUD domain
CFN60_RS16440	PF11870	Domain of unknown function (DUF3390)
CFN60_RS16440	PF13183	4Fe-4S dicluster domain
CFN60_RS16440	PF02589	LUD domain
CFN60_RS16445	PF02754	Cysteine-rich domain
CFN60_RS16450	PF00155	Aminotransferase class I and II
CFN60_RS16450	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS16455	PF07729	FCD domain
CFN60_RS16455	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS16460	PF02652	L-lactate permease
CFN60_RS16465	PF04963	Sigma-54 factor, core binding domain
CFN60_RS16465	PF04552	Sigma-54, DNA binding domain
CFN60_RS16465	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
CFN60_RS16470	PF09628	YvfG protein
CFN60_RS16475	PF04230	Polysaccharide pyruvyl transferase
CFN60_RS16480	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
CFN60_RS16485	PF17836	PglD N-terminal domain
CFN60_RS16485	PF00132	Bacterial transferase hexapeptide (six repeats)
CFN60_RS16490	PF02397	Bacterial sugar transferase
CFN60_RS16495	PF14667	Polysaccharide biosynthesis C-terminal domain
CFN60_RS16495	PF01943	Polysaccharide biosynthesis protein
CFN60_RS16500	PF00535	Glycosyl transferase family 2
CFN60_RS16505	PF04230	Polysaccharide pyruvyl transferase
CFN60_RS16510	PF00535	Glycosyl transferase family 2
CFN60_RS16520	PF00534	Glycosyl transferases group 1
CFN60_RS16520	PF13439	Glycosyltransferase Family 4
CFN60_RS16525	PF00535	Glycosyl transferase family 2
CFN60_RS16530	PF00534	Glycosyl transferases group 1
CFN60_RS16530	PF13439	Glycosyltransferase Family 4
CFN60_RS16535	PF02719	Polysaccharide biosynthesis protein
CFN60_RS16540	PF13614	AAA domain
CFN60_RS16545	PF02706	Chain length determinant protein
CFN60_RS16550	PF08671	Anti-repressor SinI
CFN60_RS16550	PF01381	Helix-turn-helix
CFN60_RS16555	PF00135	Carboxylesterase family
CFN60_RS16565	PF01872	RibD C-terminal domain
CFN60_RS16575	PF00583	Acetyltransferase (GNAT) family
CFN60_RS16580	PF05870	Phenolic acid decarboxylase (PAD)
CFN60_RS16630	PF00251	Glycosyl hydrolases family 32 N-terminal domain
CFN60_RS16630	PF08244	Glycosyl hydrolases family 32 C terminal
CFN60_RS16635	PF01306	LacY proton/sugar symporter
CFN60_RS16640	PF00356	Bacterial regulatory proteins, lacI family
CFN60_RS16645	PF00574	Clp protease
CFN60_RS16650	PF13419	Haloacid dehalogenase-like hydrolase
CFN60_RS16655	PF00128	Alpha amylase, catalytic domain
CFN60_RS16655	PF16657	Maltogenic Amylase, C-terminal domain
CFN60_RS16660	PF03636	Glycosyl hydrolase family 65, N-terminal domain 
CFN60_RS16660	PF03633	Glycosyl hydrolase family 65, C-terminal domain 
CFN60_RS16660	PF03632	Glycosyl hydrolase family 65 central catalytic domain
CFN60_RS16665	PF06691	Protein of unknown function (DUF1189)
CFN60_RS16670	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS16675	PF00528	Binding-protein-dependent transport system inner membrane component
CFN60_RS16680	PF13416	Bacterial extracellular solute-binding protein
CFN60_RS16685	PF00128	Alpha amylase, catalytic domain
CFN60_RS16685	PF02903	Alpha amylase, N-terminal ig-like domain
CFN60_RS16690	PF00356	Bacterial regulatory proteins, lacI family
CFN60_RS16695	PF03641	Possible lysine decarboxylase
CFN60_RS16700	PF03819	MazG nucleotide pyrophosphohydrolase domain
CFN60_RS16705	PF00916	Sulfate permease family
CFN60_RS16705	PF01740	STAS domain
CFN60_RS16710	PF00484	Carbonic anhydrase
CFN60_RS16720	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CFN60_RS16720	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CFN60_RS16725	PF00545	ribonuclease
CFN60_RS16730	PF00797	N-acetyltransferase
CFN60_RS16735	PF00381	PTS HPr component phosphorylation site
CFN60_RS16740	PF10298	WhiA N-terminal LAGLIDADG-like domain
CFN60_RS16740	PF14527	WhiA LAGLIDADG-like domain
CFN60_RS16740	PF02650	WhiA C-terminal HTH domain
CFN60_RS16745	PF01933	Uncharacterised protein family UPF0052
CFN60_RS16750	PF03668	P-loop ATPase protein family
CFN60_RS16755	PF00293	NUDIX domain
CFN60_RS16760	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFN60_RS16765	PF00877	NlpC/P60 family
CFN60_RS16775	PF00989	PAS fold
CFN60_RS16775	PF00512	His Kinase A (phospho-acceptor) domain
CFN60_RS16775	PF18698	Histidine kinase sensor domain
CFN60_RS16775	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS16775	PF00672	HAMP domain
CFN60_RS16780	PF00072	Response regulator receiver domain
CFN60_RS16780	PF00486	Transcriptional regulatory protein, C terminal
CFN60_RS16790	PF00664	ABC transporter transmembrane region
CFN60_RS16790	PF00005	ABC transporter
CFN60_RS16795	PF01502	Phosphoribosyl-AMP cyclohydrolase
CFN60_RS16795	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
CFN60_RS16800	PF00977	Histidine biosynthesis protein
CFN60_RS16805	PF00977	Histidine biosynthesis protein
CFN60_RS16810	PF00117	Glutamine amidotransferase class-I
CFN60_RS16815	PF00475	Imidazoleglycerol-phosphate dehydratase
CFN60_RS16820	PF00815	Histidinol dehydrogenase
CFN60_RS16825	PF01634	ATP phosphoribosyltransferase
CFN60_RS16830	PF13393	Histidyl-tRNA synthetase
CFN60_RS16835	PF13529	Peptidase_C39 like family
CFN60_RS16840	PF14602	Hexapeptide repeat of succinyl-transferase
CFN60_RS16845	PF13419	Haloacid dehalogenase-like hydrolase
CFN60_RS16850	PF01790	Prolipoprotein diacylglyceryl transferase
CFN60_RS16855	PF02603	HPr Serine kinase N terminus
CFN60_RS16855	PF07475	HPr Serine kinase C-terminal domain
CFN60_RS16860	PF01979	Amidohydrolase family
CFN60_RS16865	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
CFN60_RS16870	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS16870	PF07702	UTRA domain
CFN60_RS16875	PF00440	Bacterial regulatory proteins, tetR family
CFN60_RS16880	PF00149	Calcineurin-like phosphoesterase
CFN60_RS16885	PF04020	Mycobacterial 4 TMS phage holin, superfamily IV
CFN60_RS16890	PF04024	PspC domain
CFN60_RS16895	PF13349	Putative adhesin
CFN60_RS16910	PF00005	ABC transporter
CFN60_RS16910	PF17760	UvrA interaction domain
CFN60_RS16910	PF17755	UvrA DNA-binding domain
CFN60_RS16915	PF00271	Helicase conserved C-terminal domain
CFN60_RS16915	PF17757	UvrB interaction domain
CFN60_RS16915	PF04851	Type III restriction enzyme, res subunit
CFN60_RS16915	PF12344	Ultra-violet resistance protein B
CFN60_RS16915	PF02151	UvrB/uvrC motif
CFN60_RS16920	PF09964	Uncharacterized protein conserved in bacteria (DUF2198)
CFN60_RS16925	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
CFN60_RS16925	PF00391	PEP-utilising enzyme, mobile domain
CFN60_RS16930	PF00440	Bacterial regulatory proteins, tetR family
CFN60_RS16935	PF07690	Major Facilitator Superfamily
CFN60_RS16940	PF00975	Thioesterase domain
CFN60_RS16955	PF00005	ABC transporter
CFN60_RS16955	PF00664	ABC transporter transmembrane region
CFN60_RS16960	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS16960	PF00501	AMP-binding enzyme
CFN60_RS16960	PF00550	Phosphopantetheine attachment site
CFN60_RS16960	PF18563	TubC N-terminal docking domain
CFN60_RS16960	PF00668	Condensation domain
CFN60_RS16965	PF00501	AMP-binding enzyme
CFN60_RS16965	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS16965	PF00550	Phosphopantetheine attachment site
CFN60_RS16965	PF00668	Condensation domain
CFN60_RS16985	PF17820	PDZ domain
CFN60_RS16990	PF17423	Swarming motility protein
CFN60_RS16995	PF01471	Putative peptidoglycan binding domain
CFN60_RS16995	PF03572	Peptidase family S41
CFN60_RS16995	PF17820	PDZ domain
CFN60_RS17000	PF13229	Right handed beta helix region
CFN60_RS17005	PF02687	FtsX-like permease family
CFN60_RS17005	PF18075	FtsX extracellular domain
CFN60_RS17010	PF00005	ABC transporter
CFN60_RS17015	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
CFN60_RS17020	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CFN60_RS17020	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CFN60_RS17030	PF02810	SEC-C motif
CFN60_RS17030	PF07516	SecA Wing and Scaffold domain
CFN60_RS17030	PF01043	SecA preprotein cross-linking domain
CFN60_RS17030	PF07517	SecA DEAD-like domain
CFN60_RS17035	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus
CFN60_RS17035	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
CFN60_RS17050	PF02561	Flagellar protein FliS
CFN60_RS17055	PF02465	Flagellar hook-associated protein 2 N-terminus
CFN60_RS17055	PF07195	Flagellar hook-associated protein 2 C-terminus
CFN60_RS17055	PF07196	Flagellin hook IN motif
CFN60_RS17060	PF00669	Bacterial flagellin N-terminal helical region
CFN60_RS17060	PF00700	Bacterial flagellin C-terminal helical region
CFN60_RS17065	PF02599	Global regulator protein family
CFN60_RS17070	PF02623	FliW protein
CFN60_RS17080	PF00700	Bacterial flagellin C-terminal helical region
CFN60_RS17080	PF00669	Bacterial flagellin N-terminal helical region
CFN60_RS17085	PF00460	Flagella basal body rod protein
CFN60_RS17085	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CFN60_RS17090	PF05130	FlgN protein
CFN60_RS17095	PF04316	Anti-sigma-28 factor, FlgM
CFN60_RS17110	PF10719	Late competence development protein ComFB
CFN60_RS17115	PF00271	Helicase conserved C-terminal domain
CFN60_RS17115	PF04851	Type III restriction enzyme, res subunit
CFN60_RS17120	PF02645	Uncharacterised protein, DegV family COG1307
CFN60_RS17125	PF00196	Bacterial regulatory proteins, luxR family
CFN60_RS17125	PF00072	Response regulator receiver domain
CFN60_RS17130	PF07730	Histidine kinase
CFN60_RS17130	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS17130	PF05384	Sensor protein DegS
CFN60_RS17135	PF09186	Domain of unknown function (DUF1949)
CFN60_RS17135	PF01205	Uncharacterized protein family UPF0029
CFN60_RS17140	PF03816	Cell envelope-related transcriptional attenuator domain
CFN60_RS17145	PF00953	Glycosyl transferase family 4
CFN60_RS17155	PF00535	Glycosyl transferase family 2
CFN60_RS17160	PF02706	Chain length determinant protein
CFN60_RS17165	PF04932	O-Antigen ligase
CFN60_RS17170	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
CFN60_RS17170	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
CFN60_RS17170	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
CFN60_RS17175	PF13439	Glycosyltransferase Family 4
CFN60_RS17175	PF00534	Glycosyl transferases group 1
CFN60_RS17180	PF01943	Polysaccharide biosynthesis protein
CFN60_RS17180	PF14667	Polysaccharide biosynthesis C-terminal domain
CFN60_RS17185	PF02397	Bacterial sugar transferase
CFN60_RS17190	PF01520	N-acetylmuramoyl-L-alanine amidase
CFN60_RS17190	PF04122	Putative cell wall binding repeat 2
CFN60_RS17195	PF04122	Putative cell wall binding repeat 2
CFN60_RS17195	PF08486	Stage II sporulation protein
CFN60_RS17205	PF03816	Cell envelope-related transcriptional attenuator domain
CFN60_RS17210	PF02350	UDP-N-acetylglucosamine 2-epimerase
CFN60_RS17215	PF00483	Nucleotidyl transferase
CFN60_RS17220	PF00005	ABC transporter
CFN60_RS17225	PF01061	ABC-2 type transporter
CFN60_RS17230	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 
CFN60_RS17235	PF00535	Glycosyl transferase family 2
CFN60_RS17235	PF18674	TarS beta-glycosyltransferase C-terminal domain 1
CFN60_RS17240	PF01467	Cytidylyltransferase-like
CFN60_RS17245	PF03808	Glycosyl transferase WecB/TagA/CpsF family
CFN60_RS17250	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 
CFN60_RS17255	PF05036	Sporulation related domain
CFN60_RS17255	PF08239	Bacterial SH3 domain
CFN60_RS17255	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CFN60_RS17260	PF01238	Phosphomannose isomerase type I
CFN60_RS17265	PF03323	Bacillus/Clostridium GerA spore germination protein
CFN60_RS17270	PF03845	Spore germination protein
CFN60_RS17275	PF05504	Spore germination B3/ GerAC like, C-terminal 
CFN60_RS17285	PF00083	Sugar (and other) transporter
CFN60_RS17290	PF03816	Cell envelope-related transcriptional attenuator domain
CFN60_RS17300	PF04791	LMBR1-like membrane protein
CFN60_RS17305	PF00877	NlpC/P60 family
CFN60_RS17315	PF09587	Bacterial capsule synthesis protein PGA_cap
CFN60_RS17320	PF14102	Capsule biosynthesis CapC
CFN60_RS17325	PF08245	Mur ligase middle domain
CFN60_RS17335	PF03323	Bacillus/Clostridium GerA spore germination protein
CFN60_RS17340	PF03845	Spore germination protein
CFN60_RS17350	PF00356	Bacterial regulatory proteins, lacI family
CFN60_RS17355	PF00294	pfkB family carbohydrate kinase
CFN60_RS17360	PF05025	RbsD / FucU transport protein family
CFN60_RS17365	PF00005	ABC transporter
CFN60_RS17370	PF02653	Branched-chain amino acid transport system / permease component
CFN60_RS17375	PF13407	Periplasmic binding protein domain
CFN60_RS17380	PF08239	Bacterial SH3 domain
CFN60_RS17385	PF02525	Flavodoxin-like fold
CFN60_RS17390	PF03306	Alpha-acetolactate decarboxylase
CFN60_RS17395	PF00205	Thiamine pyrophosphate enzyme, central domain
CFN60_RS17395	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CFN60_RS17395	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CFN60_RS17400	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CFN60_RS17400	PF03466	LysR substrate binding domain
CFN60_RS17405	PF02040	Arsenical pump membrane protein
CFN60_RS17420	PF08757	CotH kinase protein
CFN60_RS17430	PF01613	Flavin reductase like domain
CFN60_RS17445	PF13404	AsnC-type helix-turn-helix domain
CFN60_RS17445	PF01037	Lrp/AsnC ligand binding domain
CFN60_RS17450	PF02417	Chromate transporter
CFN60_RS17455	PF02417	Chromate transporter
CFN60_RS17465	PF03358	NADPH-dependent FMN reductase
CFN60_RS17470	PF03466	LysR substrate binding domain
CFN60_RS17470	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CFN60_RS17475	PF04493	Endonuclease V
CFN60_RS17505	PF04740	LXG domain of WXG superfamily
CFN60_RS17505	PF14449	Pre-toxin TG
CFN60_RS17505	PF14431	YwqJ-like deaminase
CFN60_RS17515	PF16888	Domain of unknown function (DUF5082)
CFN60_RS17520	PF09234	Domain of unknown function (DUF1963)
CFN60_RS17525	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
CFN60_RS17525	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
CFN60_RS17525	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
CFN60_RS17535	PF13614	AAA domain
CFN60_RS17540	PF02706	Chain length determinant protein
CFN60_RS17540	PF13807	G-rich domain on putative tyrosine kinase
CFN60_RS17555	PF04434	SWIM zinc finger
CFN60_RS17560	PF12419	SNF2 Helicase protein 
CFN60_RS17560	PF00271	Helicase conserved C-terminal domain
CFN60_RS17560	PF00176	SNF2 family N-terminal domain
CFN60_RS17570	PF00455	DeoR C terminal sensor domain
CFN60_RS17570	PF08220	DeoR-like helix-turn-helix domain
CFN60_RS17575	PF00436	Single-strand binding protein family
CFN60_RS17585	PF14183	YwpF-like protein
CFN60_RS17590	PF01741	Large-conductance mechanosensitive channel, MscL
CFN60_RS17595	PF07977	FabA-like domain
CFN60_RS17600	PF18801	response regulator aspartate phosphatase H, N terminal
CFN60_RS17605	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CFN60_RS17605	PF00460	Flagella basal body rod protein
CFN60_RS17610	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CFN60_RS17610	PF00460	Flagella basal body rod protein
CFN60_RS17620	PF12116	Stage III sporulation protein D
CFN60_RS17625	PF01047	MarR family
CFN60_RS17630	PF07690	Major Facilitator Superfamily
CFN60_RS17635	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
CFN60_RS17640	PF07690	Major Facilitator Superfamily
CFN60_RS17645	PF00857	Isochorismatase family
CFN60_RS17650	PF00909	Ammonium Transporter Family
CFN60_RS17655	PF00543	Nitrogen regulatory protein P-II
CFN60_RS17660	PF01098	Cell cycle protein
CFN60_RS17665	PF01569	PAP2 superfamily
CFN60_RS17670	PF04892	VanZ like family 
CFN60_RS17675	PF01551	Peptidase family M23
CFN60_RS17680	PF00583	Acetyltransferase (GNAT) family
CFN60_RS17685	PF17319	Family of unknown function (DUF5362)
CFN60_RS17690	PF17370	Family of unknown function (DUF5392)
CFN60_RS17695	PF13091	PLD-like domain
CFN60_RS17695	PF13396	Phospholipase_D-nuclease N-terminal
CFN60_RS17700	PF17319	Family of unknown function (DUF5362)
CFN60_RS17705	PF00457	Glycosyl hydrolases family 11
CFN60_RS17715	PF02082	Transcriptional regulator
CFN60_RS17720	PF01979	Amidohydrolase family
CFN60_RS17720	PF00449	Urease alpha-subunit, N-terminal domain
CFN60_RS17725	PF00699	Urease beta subunit
CFN60_RS17730	PF00547	Urease, gamma subunit
CFN60_RS17745	PF18801	response regulator aspartate phosphatase H, N terminal
CFN60_RS17745	PF17874	MalT-like TPR region
CFN60_RS17750	PF06463	Molybdenum Cofactor Synthesis C
CFN60_RS17750	PF04055	Radical SAM superfamily
CFN60_RS17755	PF02634	FdhD/NarQ family
CFN60_RS17765	PF00092	von Willebrand factor type A domain
CFN60_RS17770	PF00092	von Willebrand factor type A domain
CFN60_RS17775	PF08486	Stage II sporulation protein
CFN60_RS17780	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CFN60_RS17785	PF08680	TATA-box binding
CFN60_RS17790	PF06612	Protein of unknown function (DUF1146)
CFN60_RS17800	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
CFN60_RS17800	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
CFN60_RS17805	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CFN60_RS17805	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CFN60_RS17810	PF00231	ATP synthase
CFN60_RS17815	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CFN60_RS17815	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CFN60_RS17815	PF00306	ATP synthase alpha/beta chain, C terminal domain
CFN60_RS17820	PF00213	ATP synthase delta (OSCP) subunit
CFN60_RS17825	PF00430	ATP synthase B/B' CF(0)
CFN60_RS17830	PF00137	ATP synthase subunit C
CFN60_RS17835	PF00119	ATP synthase A chain
CFN60_RS17840	PF03899	ATP synthase I chain
CFN60_RS17850	PF00464	Serine hydroxymethyltransferase
CFN60_RS17855	PF04260	Protein of unknown function (DUF436) 
CFN60_RS17860	PF02502	Ribose/Galactose Isomerase
CFN60_RS17865	PF01451	Low molecular weight phosphotyrosine protein phosphatase
CFN60_RS17870	PF02659	Putative manganese efflux pump
CFN60_RS17875	PF03481	Putative GTP-binding controlling metal-binding
CFN60_RS17875	PF01300	Telomere recombination
CFN60_RS17885	PF09551	Stage II sporulation protein R (spore_II_R)
CFN60_RS17890	PF17094	Uncharacterised protein family (UPF0715)
CFN60_RS17895	PF17247	Family of unknown function (DUF5316)
CFN60_RS17900	PF17827	PrmC N-terminal domain
CFN60_RS17900	PF05175	Methyltransferase small domain
CFN60_RS17905	PF03462	PCRF domain
CFN60_RS17905	PF00472	RF-1 domain
CFN60_RS17910	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CFN60_RS17915	PF13411	MerR HTH family regulatory protein
CFN60_RS17920	PF03547	Membrane transport protein
CFN60_RS17925	PF03949	Malic enzyme, NAD binding domain
CFN60_RS17925	PF00390	Malic enzyme, N-terminal domain
CFN60_RS17930	PF00265	Thymidine kinase
CFN60_RS17935	PF01197	Ribosomal protein L31
CFN60_RS17940	PF07498	Rho termination factor, N-terminal domain
CFN60_RS17940	PF07497	Rho termination factor, RNA-binding domain
CFN60_RS17940	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CFN60_RS17945	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
CFN60_RS17950	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CFN60_RS17955	PF00923	Transaldolase/Fructose-6-phosphate aldolase
CFN60_RS17960	PF01116	Fructose-bisphosphate aldolase class-II
CFN60_RS17965	PF00072	Response regulator receiver domain
CFN60_RS17970	PF10740	Domain of unknown function (DUF2529)
CFN60_RS17975	PF00117	Glutamine amidotransferase class-I
CFN60_RS17975	PF06418	CTP synthase N-terminus
CFN60_RS17980	PF05066	HB1, ASXL, restriction endonuclease HTH domain
CFN60_RS17985	PF13183	4Fe-4S dicluster domain
CFN60_RS17985	PF02754	Cysteine-rich domain
CFN60_RS17990	PF13091	PLD-like domain
CFN60_RS17995	PF03851	UV-endonuclease UvdE
CFN60_RS18005	PF00005	ABC transporter
CFN60_RS18005	PF00664	ABC transporter transmembrane region
CFN60_RS18010	PF13396	Phospholipase_D-nuclease N-terminal
CFN60_RS18010	PF13091	PLD-like domain
CFN60_RS18020	PF02665	Nitrate reductase gamma subunit
CFN60_RS18025	PF02613	Nitrate reductase delta subunit
CFN60_RS18030	PF13247	4Fe-4S dicluster domain
CFN60_RS18030	PF14711	Respiratory nitrate reductase beta C-terminal
CFN60_RS18035	PF00384	Molybdopterin oxidoreductase
CFN60_RS18035	PF01568	Molydopterin dinucleotide binding domain
CFN60_RS18035	PF14710	Respiratory nitrate reductase alpha N-terminal
CFN60_RS18045	PF14256	YwiC-like protein
CFN60_RS18050	PF00027	Cyclic nucleotide-binding domain
CFN60_RS18050	PF00325	Bacterial regulatory proteins, crp family
CFN60_RS18055	PF07690	Major Facilitator Superfamily
CFN60_RS18060	PF03485	Arginyl tRNA synthetase N terminal domain
CFN60_RS18060	PF05746	DALR anticodon binding domain
CFN60_RS18060	PF00750	tRNA synthetases class I (R)
CFN60_RS18065	PF09148	Domain of unknown function (DUF1934)
CFN60_RS18070	PF18801	response regulator aspartate phosphatase H, N terminal
CFN60_RS18115	PF00491	Arginase family
CFN60_RS18120	PF17284	Spermidine synthase tetramerisation domain
CFN60_RS18125	PF00905	Penicillin binding protein transpeptidase domain
CFN60_RS18125	PF00912	Transglycosylase
CFN60_RS18135	PF08741	YwhD family
CFN60_RS18140	PF02163	Peptidase family M50
CFN60_RS18145	PF01361	Tautomerase enzyme
CFN60_RS18150	PF01047	MarR family
CFN60_RS18155	PF13520	Amino acid permease
CFN60_RS18165	PF01966	HD domain
CFN60_RS18170	PF07293	Protein of unknown function (DUF1450)
CFN60_RS18180	PF03551	Transcriptional regulator PadR-like family
CFN60_RS18190	PF00005	ABC transporter
CFN60_RS18195	PF12679	ABC-2 family transporter protein
CFN60_RS18220	PF03099	Biotin/lipoate A/B protein ligase family
CFN60_RS18225	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CFN60_RS18225	PF03466	LysR substrate binding domain
CFN60_RS18230	PF03601	Conserved hypothetical protein 698
CFN60_RS18235	PF01515	Phosphate acetyl/butaryl transferase
CFN60_RS18240	PF06778	Chlorite dismutase
CFN60_RS18250	PF00155	Aminotransferase class I and II
CFN60_RS18255	PF07690	Major Facilitator Superfamily
CFN60_RS18270	PF07883	Cupin domain
CFN60_RS18280	PF07690	Major Facilitator Superfamily
CFN60_RS18285	PF07690	Major Facilitator Superfamily
CFN60_RS18290	PF00324	Amino acid permease
CFN60_RS18295	PF01546	Peptidase family M20/M25/M40
CFN60_RS18300	PF00171	Aldehyde dehydrogenase family
CFN60_RS18305	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CFN60_RS18305	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
CFN60_RS18310	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS18310	PF00512	His Kinase A (phospho-acceptor) domain
CFN60_RS18315	PF00486	Transcriptional regulatory protein, C terminal
CFN60_RS18315	PF00072	Response regulator receiver domain
CFN60_RS18330	PF00005	ABC transporter
CFN60_RS18335	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
CFN60_RS18340	PF04321	RmlD substrate binding domain
CFN60_RS18345	PF16363	GDP-mannose 4,6 dehydratase
CFN60_RS18350	PF00483	Nucleotidyl transferase
CFN60_RS18355	PF04101	Glycosyltransferase family 28 C-terminal domain
CFN60_RS18360	PF02348	Cytidylyltransferase
CFN60_RS18365	PF03102	NeuB family
CFN60_RS18365	PF08666	SAF domain
CFN60_RS18370	PF00583	Acetyltransferase (GNAT) family
CFN60_RS18375	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
CFN60_RS18380	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 
CFN60_RS18385	PF00535	Glycosyl transferase family 2
CFN60_RS18390	PF09671	Spore coat protein (Spore_GerQ)
CFN60_RS18395	PF04241	Protein of unknown function (DUF423)
CFN60_RS18400	PF00860	Permease family
CFN60_RS18405	PF17261	Family of unknown function (DUF5327)
CFN60_RS18410	PF03167	Uracil DNA glycosylase superfamily
CFN60_RS18415	PF00535	Glycosyl transferase family 2
CFN60_RS18430	PF03551	Transcriptional regulator PadR-like family
CFN60_RS18435	PF08543	Phosphomethylpyrimidine kinase
CFN60_RS18445	PF00251	Glycosyl hydrolases family 32 N-terminal domain
CFN60_RS18445	PF08244	Glycosyl hydrolases family 32 C terminal
CFN60_RS18450	PF00367	phosphotransferase system, EIIB
CFN60_RS18450	PF02378	Phosphotransferase system, EIIC 
CFN60_RS18455	PF03123	CAT RNA binding domain
CFN60_RS18455	PF00874	PRD domain
CFN60_RS18465	PF00082	Subtilase family
CFN60_RS18465	PF13860	FlgD Ig-like domain
CFN60_RS18465	PF02225	PA domain
CFN60_RS18465	PF05922	Peptidase inhibitor I9
CFN60_RS18470	PF00296	Luciferase-like monooxygenase
CFN60_RS18475	PF00881	Nitroreductase family
CFN60_RS18480	PF01098	Cell cycle protein
CFN60_RS18485	PF00583	Acetyltransferase (GNAT) family
CFN60_RS18490	PF17368	Spore morphogenesis and germination YwcE
CFN60_RS18495	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
CFN60_RS18500	PF00510	Cytochrome c oxidase subunit III
CFN60_RS18505	PF00115	Cytochrome C and Quinol oxidase polypeptide I
CFN60_RS18510	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
CFN60_RS18510	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
CFN60_RS18515	PF04226	Transglycosylase associated protein
CFN60_RS18520	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
CFN60_RS18520	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
CFN60_RS18525	PF10509	Galactokinase galactose-binding signature
CFN60_RS18525	PF00288	GHMP kinases N terminal domain
CFN60_RS18525	PF08544	GHMP kinases C terminal 
CFN60_RS18530	PF04138	GtrA-like protein
CFN60_RS18535	PF00440	Bacterial regulatory proteins, tetR family
CFN60_RS18540	PF08671	Anti-repressor SinI
CFN60_RS18555	PF01323	DSBA-like thioredoxin domain
CFN60_RS18560	PF04261	Dyp-type peroxidase family 
CFN60_RS18560	PF10518	TAT (twin-arginine translocation) pathway signal sequence
CFN60_RS18565	PF09375	Imelysin
CFN60_RS18570	PF02581	Thiamine monophosphate synthase
CFN60_RS18575	PF02110	Hydroxyethylthiazole kinase family
CFN60_RS18580	PF03466	LysR substrate binding domain
CFN60_RS18580	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CFN60_RS18585	PF03788	LrgA family
CFN60_RS18590	PF04172	LrgB-like family 
CFN60_RS18595	PF09962	Uncharacterized conserved protein (DUF2196)
CFN60_RS18600	PF13411	MerR HTH family regulatory protein
CFN60_RS18600	PF07739	TipAS antibiotic-recognition domain
CFN60_RS18605	PF10026	Predicted Zn-dependent protease (DUF2268)
CFN60_RS18610	PF10672	S-adenosylmethionine-dependent methyltransferase
CFN60_RS18610	PF17785	PUA-like domain
CFN60_RS18615	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CFN60_RS18620	PF02378	Phosphotransferase system, EIIC 
CFN60_RS18625	PF00082	Subtilase family
CFN60_RS18630	PF01501	Glycosyl transferase family 8
CFN60_RS18635	PF01047	MarR family
CFN60_RS18640	PF01479	S4 domain
CFN60_RS18640	PF00579	tRNA synthetases class I (W and Y)
CFN60_RS18645	PF04607	Region found in RelA / SpoT proteins
CFN60_RS18650	PF01040	UbiA prenyltransferase family
CFN60_RS18660	PF12459	D-Ala-teichoic acid biosynthesis protein
CFN60_RS18665	PF00501	AMP-binding enzyme
CFN60_RS18665	PF13193	AMP-binding enzyme C-terminal domain
CFN60_RS18670	PF03062	MBOAT, membrane-bound O-acyltransferase family
CFN60_RS18675	PF00550	Phosphopantetheine attachment site
CFN60_RS18680	PF04914	DltD protein
CFN60_RS18685	PF01063	Amino-transferase class IV
CFN60_RS18690	PF11975	Family 4 glycosyl hydrolase C-terminal domain
CFN60_RS18690	PF02056	Family 4 glycosyl hydrolase
CFN60_RS18695	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
CFN60_RS18700	PF02378	Phosphotransferase system, EIIC 
CFN60_RS18705	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CFN60_RS18710	PF08279	HTH domain
CFN60_RS18710	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CFN60_RS18710	PF05043	Mga helix-turn-helix domain
CFN60_RS18710	PF00874	PRD domain
CFN60_RS18715	PF02245	Methylpurine-DNA glycosylase (MPG)
CFN60_RS18725	PF01032	FecCD transport family
CFN60_RS18730	PF01032	FecCD transport family
CFN60_RS18740	PF01022	Bacterial regulatory protein, arsR family
CFN60_RS18745	PF02040	Arsenical pump membrane protein
CFN60_RS18750	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CFN60_RS18755	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
CFN60_RS18760	PF02378	Phosphotransferase system, EIIC 
CFN60_RS18765	PF00232	Glycosyl hydrolase family 1
CFN60_RS18770	PF00480	ROK family
CFN60_RS18775	PF01238	Phosphomannose isomerase type I
CFN60_RS18780	PF02156	Glycosyl hydrolase family 26
CFN60_RS18785	PF00199	Catalase
CFN60_RS18785	PF06628	Catalase-related immune-responsive
CFN60_RS18790	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
CFN60_RS18795	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
CFN60_RS18800	PF01256	Carbohydrate kinase
CFN60_RS18805	PF00005	ABC transporter
CFN60_RS18805	PF00664	ABC transporter transmembrane region
CFN60_RS18810	PF00664	ABC transporter transmembrane region
CFN60_RS18810	PF00005	ABC transporter
CFN60_RS18815	PF02322	Cytochrome bd terminal oxidase subunit II
CFN60_RS18820	PF01654	Cytochrome bd terminal oxidase subunit I
CFN60_RS18825	PF03390	2-hydroxycarboxylate transporter family
CFN60_RS18830	PF01522	Polysaccharide deacetylase
CFN60_RS18835	PF00005	ABC transporter
CFN60_RS18835	PF03459	TOBE domain
CFN60_RS18835	PF17912	MalK OB fold domain
CFN60_RS18840	PF13556	PucR C-terminal helix-turn-helix domain
CFN60_RS18845	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CFN60_RS18845	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CFN60_RS18850	PF11611	Domain of unknown function (DUF4352)
CFN60_RS18855	PF16363	GDP-mannose 4,6 dehydratase
CFN60_RS18860	PF07687	Peptidase dimerisation domain
CFN60_RS18860	PF01546	Peptidase family M20/M25/M40
CFN60_RS18865	PF04525	LURP-one-related
CFN60_RS18870	PF01717	Cobalamin-independent synthase, Catalytic domain
CFN60_RS18875	PF08241	Methyltransferase domain
CFN60_RS18880	PF01773	Na+ dependent nucleoside transporter N-terminus
CFN60_RS18880	PF07662	Na+ dependent nucleoside transporter C-terminus
CFN60_RS18900	PF06628	Catalase-related immune-responsive
CFN60_RS18900	PF00199	Catalase
CFN60_RS18900	PF18011	C-terminal domain found in long catalases
CFN60_RS18905	PF03600	Citrate transporter
CFN60_RS18910	PF00722	Glycosyl hydrolases family 16
CFN60_RS18915	PF03123	CAT RNA binding domain
CFN60_RS18915	PF00874	PRD domain
CFN60_RS18920	PF11700	Vacuole effluxer Atg22 like
CFN60_RS18925	PF00271	Helicase conserved C-terminal domain
CFN60_RS18925	PF00270	DEAD/DEAH box helicase
CFN60_RS18925	PF03880	DbpA RNA binding domain   
CFN60_RS18940	PF14176	YxiJ-like protein
CFN60_RS18960	PF05593	RHS Repeat
CFN60_RS18965	PF00544	Pectate lyase
CFN60_RS18970	PF00892	EamA-like transporter family
CFN60_RS18975	PF00582	Universal stress protein family
CFN60_RS18985	PF00293	NUDIX domain
CFN60_RS18990	PF16369	C-terminal lipocalin-like domain
CFN60_RS18990	PF04616	Glycosyl hydrolases family 43
CFN60_RS18995	PF09021	HutP
CFN60_RS19000	PF00221	Aromatic amino acid lyase
CFN60_RS19005	PF01175	Urocanase Rossmann-like domain
CFN60_RS19005	PF17391	Urocanase N-terminal domain
CFN60_RS19005	PF17392	Urocanase C-terminal domain
CFN60_RS19010	PF01979	Amidohydrolase family
CFN60_RS19015	PF00491	Arginase family
CFN60_RS19020	PF00324	Amino acid permease
CFN60_RS19025	PF00591	Glycosyl transferase family, a/b domain
CFN60_RS19025	PF02885	Glycosyl transferase family, helical bundle domain
CFN60_RS19025	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
CFN60_RS19030	PF01773	Na+ dependent nucleoside transporter N-terminus
CFN60_RS19030	PF07662	Na+ dependent nucleoside transporter C-terminus
CFN60_RS19035	PF01791	DeoC/LacD family aldolase
CFN60_RS19040	PF04198	Putative sugar-binding domain
CFN60_RS19055	PF11631	Protein of unknown function (DUF3255)
CFN60_RS19075	PF01497	Periplasmic binding protein
CFN60_RS19080	PF06486	Protein of unknown function (DUF1093)
CFN60_RS19085	PF02687	FtsX-like permease family
CFN60_RS19090	PF00005	ABC transporter
CFN60_RS19095	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS19100	PF00486	Transcriptional regulatory protein, C terminal
CFN60_RS19100	PF00072	Response regulator receiver domain
CFN60_RS19105	PF00512	His Kinase A (phospho-acceptor) domain
CFN60_RS19105	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS19110	PF00486	Transcriptional regulatory protein, C terminal
CFN60_RS19110	PF00072	Response regulator receiver domain
CFN60_RS19115	PF00005	ABC transporter
CFN60_RS19130	PF01116	Fructose-bisphosphate aldolase class-II
CFN60_RS19135	PF01261	Xylose isomerase-like TIM barrel
CFN60_RS19140	PF01261	Xylose isomerase-like TIM barrel
CFN60_RS19145	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CFN60_RS19145	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CFN60_RS19150	PF07690	Major Facilitator Superfamily
CFN60_RS19155	PF01261	Xylose isomerase-like TIM barrel
CFN60_RS19160	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CFN60_RS19160	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CFN60_RS19160	PF00205	Thiamine pyrophosphate enzyme, central domain
CFN60_RS19165	PF00294	pfkB family carbohydrate kinase
CFN60_RS19170	PF04962	KduI/IolB family
CFN60_RS19175	PF00171	Aldehyde dehydrogenase family
CFN60_RS19180	PF08220	DeoR-like helix-turn-helix domain
CFN60_RS19180	PF00455	DeoR C terminal sensor domain
CFN60_RS19185	PF00248	Aldo/keto reductase family
CFN60_RS19190	PF00083	Sugar (and other) transporter
CFN60_RS19195	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS19195	PF00183	Hsp90 protein
CFN60_RS19210	PF00196	Bacterial regulatory proteins, luxR family
CFN60_RS19210	PF00072	Response regulator receiver domain
CFN60_RS19215	PF07730	Histidine kinase
CFN60_RS19220	PF00487	Fatty acid desaturase
CFN60_RS19230	PF00440	Bacterial regulatory proteins, tetR family
CFN60_RS19235	PF00171	Aldehyde dehydrogenase family
CFN60_RS19240	PF13570	PQQ-like domain
CFN60_RS19240	PF13360	PQQ-like domain
CFN60_RS19240	PF01011	PQQ enzyme repeat
CFN60_RS19245	PF17369	Family of unknown function (DUF5391)
CFN60_RS19255	PF07690	Major Facilitator Superfamily
CFN60_RS19260	PF06271	RDD family
CFN60_RS19270	PF00578	AhpC/TSA family
CFN60_RS19275	PF13192	Thioredoxin domain
CFN60_RS19275	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFN60_RS19280	PF02661	Fic/DOC family
CFN60_RS19280	PF13784	Fic/DOC family N-terminal
CFN60_RS19285	PF00324	Amino acid permease
CFN60_RS19290	PF06874	Firmicute fructose-1,6-bisphosphatase
CFN60_RS19295	PF00111	2Fe-2S iron-sulfur cluster binding domain
CFN60_RS19295	PF01799	[2Fe-2S] binding domain
CFN60_RS19305	PF00111	2Fe-2S iron-sulfur cluster binding domain
CFN60_RS19305	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
CFN60_RS19305	PF01799	[2Fe-2S] binding domain
CFN60_RS19305	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CFN60_RS19310	PF12804	MobA-like NTP transferase domain
CFN60_RS19315	PF02625	XdhC and CoxI family
CFN60_RS19315	PF13478	XdhC Rossmann domain
CFN60_RS19350	PF02590	Predicted SPOUT methyltransferase
CFN60_RS19355	PF14116	YyzF-like protein
CFN60_RS19375	PF00248	Aldo/keto reductase family
CFN60_RS19380	PF00583	Acetyltransferase (GNAT) family
CFN60_RS19385	PF18801	response regulator aspartate phosphatase H, N terminal
CFN60_RS19390	PF00491	Arginase family
CFN60_RS19395	PF00324	Amino acid permease
CFN60_RS19400	PF00202	Aminotransferase class-III
CFN60_RS19405	PF07853	Protein of unknown function (DUF1648)
CFN60_RS19405	PF13630	SdpI/YhfL protein family
CFN60_RS19410	PF01022	Bacterial regulatory protein, arsR family
CFN60_RS19415	PF13426	PAS domain
CFN60_RS19415	PF00158	Sigma-54 interaction domain
CFN60_RS19415	PF02954	Bacterial regulatory protein, Fis family
CFN60_RS19425	PF16326	ABC transporter C-terminal domain
CFN60_RS19425	PF12848	ABC transporter
CFN60_RS19425	PF00005	ABC transporter
CFN60_RS19440	PF00899	ThiF family
CFN60_RS19445	PF00512	His Kinase A (phospho-acceptor) domain
CFN60_RS19445	PF00672	HAMP domain
CFN60_RS19445	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS19450	PF00486	Transcriptional regulatory protein, C terminal
CFN60_RS19450	PF00072	Response regulator receiver domain
CFN60_RS19460	PF13180	PDZ domain
CFN60_RS19465	PF00753	Metallo-beta-lactamase superfamily
CFN60_RS19470	PF09648	YycH protein
CFN60_RS19475	PF07435	YycH protein
CFN60_RS19480	PF13426	PAS domain
CFN60_RS19480	PF00672	HAMP domain
CFN60_RS19480	PF00512	His Kinase A (phospho-acceptor) domain
CFN60_RS19480	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFN60_RS19485	PF00486	Transcriptional regulatory protein, C terminal
CFN60_RS19485	PF00072	Response regulator receiver domain
CFN60_RS19515	PF00709	Adenylosuccinate synthetase
CFN60_RS19520	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CFN60_RS19525	PF00772	DnaB-like helicase N terminal domain
CFN60_RS19525	PF03796	DnaB-like helicase C terminal domain
CFN60_RS19530	PF09954	Uncharacterized protein conserved in bacteria (DUF2188)
CFN60_RS19540	PF14174	YycC-like protein
CFN60_RS19545	PF13231	Dolichyl-phosphate-mannose-protein mannosyltransferase
CFN60_RS19550	PF00534	Glycosyl transferases group 1
CFN60_RS19550	PF13439	Glycosyltransferase Family 4
CFN60_RS19560	PF02222	ATP-grasp domain
CFN60_RS19565	PF00534	Glycosyl transferases group 1
CFN60_RS19565	PF13439	Glycosyltransferase Family 4
CFN60_RS19580	PF01281	Ribosomal protein L9, N-terminal domain
CFN60_RS19580	PF03948	Ribosomal protein L9, C-terminal domain
CFN60_RS19585	PF02272	DHHA1 domain
CFN60_RS19585	PF01368	DHH family
CFN60_RS19590	PF09991	Predicted membrane protein (DUF2232)
CFN60_RS19600	PF07875	Coat F domain
CFN60_RS19605	PF01638	HxlR-like helix-turn-helix
CFN60_RS19610	PF01368	DHH family
CFN60_RS19610	PF02833	DHHA2 domain
CFN60_RS19615	PF00892	EamA-like transporter family
CFN60_RS19620	PF02435	Levansucrase/Invertase
CFN60_RS19625	PF00251	Glycosyl hydrolases family 32 N-terminal domain
CFN60_RS19625	PF08244	Glycosyl hydrolases family 32 C terminal
CFN60_RS19630	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS19630	PF07729	FCD domain
CFN60_RS19635	PF05163	DinB family
CFN60_RS19640	PF07690	Major Facilitator Superfamily
CFN60_RS19645	PF00892	EamA-like transporter family
CFN60_RS19655	PF00881	Nitroreductase family
CFN60_RS19660	PF01047	MarR family
CFN60_RS19665	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CFN60_RS19665	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CFN60_RS19670	PF01047	MarR family
CFN60_RS19675	PF13673	Acetyltransferase (GNAT) domain
CFN60_RS19685	PF13419	Haloacid dehalogenase-like hydrolase
CFN60_RS19690	PF00293	NUDIX domain
CFN60_RS19690	PF13344	Haloacid dehalogenase-like hydrolase
CFN60_RS19715	PF05922	Peptidase inhibitor I9
CFN60_RS19715	PF00082	Subtilase family
CFN60_RS19725	PF00392	Bacterial regulatory proteins, gntR family
CFN60_RS19725	PF00155	Aminotransferase class I and II
CFN60_RS19730	PF00892	EamA-like transporter family
CFN60_RS19735	PF01966	HD domain
CFN60_RS19740	PF16302	Domain of unknown function (DUF4944)
CFN60_RS19745	PF03190	Protein of unknown function, DUF255
CFN60_RS19750	PF02517	CPBP intramembrane metalloprotease
CFN60_RS19755	PF00083	Sugar (and other) transporter
CFN60_RS19760	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CFN60_RS19765	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
CFN60_RS19765	PF00356	Bacterial regulatory proteins, lacI family
CFN60_RS19775	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
CFN60_RS19775	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
CFN60_RS19780	PF02805	Metal binding domain of Ada
CFN60_RS19780	PF12833	Helix-turn-helix domain
CFN60_RS19785	PF01084	Ribosomal protein S18
CFN60_RS19790	PF00436	Single-strand binding protein family
CFN60_RS19795	PF01250	Ribosomal protein S6
CFN60_RS19800	PF01926	50S ribosome-binding GTPase
CFN60_RS19800	PF06071	Protein of unknown function (DUF933)
CFN60_RS19805	PF01568	Molydopterin dinucleotide binding domain
CFN60_RS19805	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CFN60_RS19805	PF00384	Molybdopterin oxidoreductase
CFN60_RS19810	PF06107	Bacterial protein of unknown function (DUF951)
CFN60_RS19825	PF06866	Protein of unknown function (DUF1256)
CFN60_RS19830	PF17762	HTH domain found in ParB protein
CFN60_RS19830	PF02195	ParB-like nuclease domain
CFN60_RS19835	PF13614	AAA domain
CFN60_RS19840	PF17762	HTH domain found in ParB protein
CFN60_RS19840	PF02195	ParB-like nuclease domain
CFN60_RS19845	PF02527	rRNA small subunit methyltransferase G
CFN60_RS19850	PF01134	Glucose inhibited division protein A
CFN60_RS19850	PF13932	GidA associated domain
CFN60_RS19855	PF12631	MnmE helical domain
CFN60_RS19855	PF10396	GTP-binding protein TrmE N-terminus
CFN60_RS19855	PF01926	50S ribosome-binding GTPase
CFN60_RS19860	PF14804	Jag N-terminus
CFN60_RS19860	PF01424	R3H domain
CFN60_RS19865	PF02096	60Kd inner membrane protein
CFN60_RS19870	PF00825	Ribonuclease P
CFN60_RS19875	PF00468	Ribosomal protein L34
CFN60_RS19880	PF01446	Replication protein
CFN60_RS19890	PF17094	Uncharacterised protein family (UPF0715)
CFN60_RS19895	PF01076	Plasmid recombination enzyme
CFN60_RS19905	PF18801	response regulator aspartate phosphatase H, N terminal
CFN60_RS19905	PF13181	Tetratricopeptide repeat
