locus-tag	class	description
LUX28_RS00010	COG0592	DNA-directed DNA polymerase activity
LUX28_RS00015	COG2501	S4 domain
LUX28_RS00030	COG0187	DNA topoisomerase II activity
LUX28_RS00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LUX28_RS00070	COG0516	GMP reductase activity
LUX28_RS00070	COG0517	IMP dehydrogenase activity
LUX28_RS00075	COG1686	Belongs to the peptidase S11 family
LUX28_RS00095	COG1929	Belongs to the glycerate kinase type-1 family
LUX28_RS00105	COG1428	Deoxynucleoside kinase
LUX28_RS00110	COG1428	Deoxynucleoside kinase
LUX28_RS00115	COG1388	LysM domain
LUX28_RS00115	COG3858	chitin binding
LUX28_RS00120	COG1335	isochorismatase
LUX28_RS00125	COG0590	tRNA wobble adenosine to inosine editing
LUX28_RS00135	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LUX28_RS00140	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LUX28_RS00145	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LUX28_RS00180	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
LUX28_RS00185	COG3853	Toxic anion resistance protein (TelA)
LUX28_RS00190	COG1982	Orn Lys Arg decarboxylase major
LUX28_RS00200	COG3870	Protein conserved in bacteria
LUX28_RS00205	COG1728	Protein conserved in bacteria
LUX28_RS00210	COG0470	DNA polymerase III
LUX28_RS00215	COG1774	PSP1 C-terminal conserved region
LUX28_RS00225	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
LUX28_RS00235	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LUX28_RS00240	COG2002	toxin-antitoxin pair type II binding
LUX28_RS00245	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LUX28_RS00245	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LUX28_RS00250	COG0084	hydrolase, TatD family'
LUX28_RS00255	COG3583	domain protein
LUX28_RS00255	COG3584	3D domain protein
LUX28_RS00260	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LUX28_RS00265	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
LUX28_RS00275	COG4466	Protein conserved in bacteria
LUX28_RS00290	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LUX28_RS00295	COG0251	oxidation-reduction process
LUX28_RS00310	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LUX28_RS00330	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LUX28_RS00335	COG2002	toxin-antitoxin pair type II binding
LUX28_RS00340	COG2244	polysaccharide biosynthetic process
LUX28_RS00345	COG3956	TIGRFAM MazG family protein
LUX28_RS00350	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LUX28_RS00365	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LUX28_RS00370	COG1098	S1 RNA binding domain
LUX28_RS00385	COG2208	phosphoserine phosphatase activity
LUX28_RS00390	COG2304	oxidoreductase activity
LUX28_RS00395	COG0515	serine threonine protein kinase
LUX28_RS00400	COG0037	tRNA processing
LUX28_RS00405	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
LUX28_RS00410	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LUX28_RS00425	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LUX28_RS00430	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LUX28_RS00435	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LUX28_RS00440	COG0512	Glutamine amidotransferase of anthranilate synthase
LUX28_RS00445	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LUX28_RS00450	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LUX28_RS00455	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LUX28_RS00460	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LUX28_RS00465	COG1396	sequence-specific DNA binding
LUX28_RS00470	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LUX28_RS00475	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
LUX28_RS00555	COG4463	regulation of RNA biosynthetic process
LUX28_RS00560	COG3880	PFAM UvrB UvrC protein
LUX28_RS00570	COG0542	response to heat
LUX28_RS00575	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LUX28_RS00580	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
LUX28_RS00585	COG4956	integral membrane protein (PIN domain superfamily)
LUX28_RS00605	COG1045	serine acetyltransferase
LUX28_RS00615	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
LUX28_RS00620	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LUX28_RS00625	COG3688	RNA-binding protein containing a PIN domain
LUX28_RS00630	COG1595	DNA-templated transcription, initiation
LUX28_RS00640	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LUX28_RS00645	COG0250	Participates in transcription elongation, termination and antitermination
LUX28_RS00670	COG2813	Specifically methylates the guanine in position
LUX28_RS00685	COG1358	cellular component organization or biogenesis
LUX28_RS00710	COG0596	Alpha beta hydrolase
LUX28_RS00820	COG0201	protein transport
LUX28_RS00830	COG0024	Methionine aminopeptidase
LUX28_RS00845	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LUX28_RS00870	COG1122	ATPase activity
LUX28_RS00875	COG1122	ATPase activity
LUX28_RS00880	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LUX28_RS00900	COG2226	methyltransferase
LUX28_RS00905	COG2318	DinB family
LUX28_RS00915	COG0860	N-Acetylmuramoyl-L-alanine amidase
LUX28_RS00920	COG0489	protein tyrosine kinase activity
LUX28_RS00930	COG2194	sulfuric ester hydrolase activity
LUX28_RS00935	COG0726	polysaccharide deacetylase
LUX28_RS01000	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LUX28_RS01015	COG0659	secondary active sulfate transmembrane transporter activity
LUX28_RS01020	COG0385	Bile acid
LUX28_RS01025	COG2819	hydrolase of the alpha beta superfamily
LUX28_RS01030	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LUX28_RS01035	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LUX28_RS01040	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LUX28_RS01045	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LUX28_RS01045	COG2207	Transcriptional regulator
LUX28_RS01050	COG3876	Protein conserved in bacteria
LUX28_RS01055	COG1472	Belongs to the glycosyl hydrolase 3 family
LUX28_RS01060	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LUX28_RS01065	COG1263	PTS System
LUX28_RS01065	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LUX28_RS01075	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LUX28_RS01080	COG1683	Conserved Protein
LUX28_RS01110	COG1595	DNA-templated transcription, initiation
LUX28_RS01115	COG5662	AntiSigma factor
LUX28_RS01120	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LUX28_RS01125	COG4856	YbbR-like protein
LUX28_RS01165	COG1346	cytolysis
LUX28_RS01170	COG1380	Effector of murein hydrolase LrgA
LUX28_RS01175	COG1846	Transcriptional regulator
LUX28_RS01180	COG1113	amino acid transport
LUX28_RS01185	COG1011	Hydrolase
LUX28_RS01190	COG4585	Histidine kinase
LUX28_RS01195	COG2197	response regulator
LUX28_RS01200	COG1131	(ABC) transporter
LUX28_RS01220	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
LUX28_RS01240	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS01240	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS01240	COG3321	synthase
LUX28_RS01240	COG4221	oxidoreductase activity
LUX28_RS01245	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS01245	COG0318	PFAM AMP-dependent synthetase and ligase
LUX28_RS01245	COG0300	oxidoreductase activity
LUX28_RS01245	COG3321	synthase
LUX28_RS01245	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS01285	COG0531	amino acid
LUX28_RS01295	COG0584	glycerophosphoryl diester phosphodiesterase
LUX28_RS01300	COG2271	Major facilitator Superfamily
LUX28_RS01310	COG2368	4-hydroxyphenylacetate
LUX28_RS01320	COG3409	Peptidoglycan-binding domain 1 protein
LUX28_RS01335	COG0371	Dehydrogenase
LUX28_RS01345	COG1183	phosphatidylcholine synthase activity
LUX28_RS01350	COG0586	Pfam SNARE associated Golgi protein
LUX28_RS01355	COG0688	phosphatidylethanolamine metabolic process
LUX28_RS01370	COG1301	dicarboxylic acid transport
LUX28_RS01375	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LUX28_RS01380	COG0833	amino acid
LUX28_RS01385	COG2040	homocysteine
LUX28_RS01390	COG1115	amino acid carrier protein
LUX28_RS01395	COG2066	Belongs to the glutaminase family
LUX28_RS01400	COG4191	Histidine kinase
LUX28_RS01405	COG0784	Response regulator, receiver
LUX28_RS01425	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LUX28_RS01430	COG0778	Nitroreductase
LUX28_RS01435	COG0346	lactoylglutathione lyase activity
LUX28_RS01440	COG2259	Doxx family
LUX28_RS01445	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LUX28_RS01455	COG3773	Cell wall hydrolase
LUX28_RS01460	COG3540	Alkaline phosphatase
LUX28_RS01465	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LUX28_RS01470	COG0805	protein transport
LUX28_RS01480	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LUX28_RS01485	COG0477	Major facilitator Superfamily
LUX28_RS01490	COG1309	transcriptional regulator
LUX28_RS01495	COG0252	asparaginase activity
LUX28_RS01500	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
LUX28_RS01505	COG1405	negative regulation of cell septum assembly
LUX28_RS01505	COG3012	SEC-C Motif Domain Protein
LUX28_RS01510	COG0667	Aldo Keto reductase
LUX28_RS01520	COG1595	DNA-templated transcription, initiation
LUX28_RS01525	COG1595	DNA-templated transcription, initiation
LUX28_RS01530	COG1876	peptidase activity
LUX28_RS01535	COG0457	Tetratricopeptide repeat
LUX28_RS01540	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS01545	COG0366	Alpha amylase catalytic
LUX28_RS01550	COG0803	Belongs to the bacterial solute-binding protein 9 family
LUX28_RS01555	COG1121	(ABC) transporter
LUX28_RS01560	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LUX28_RS01565	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LUX28_RS01570	COG2310	stress, protein
LUX28_RS01575	COG2310	stress, protein
LUX28_RS01580	COG2310	stress, protein
LUX28_RS01585	COG0861	Integral membrane protein TerC family
LUX28_RS01595	COG3853	Toxic anion resistance protein (TelA)
LUX28_RS01600	COG0477	Major facilitator Superfamily
LUX28_RS01605	COG0517	IMP dehydrogenase activity
LUX28_RS01605	COG4175	Glycine betaine
LUX28_RS01610	COG4176	ABC-type proline glycine betaine transport system permease component
LUX28_RS01615	COG2113	Glycine betaine
LUX28_RS01620	COG1473	amidohydrolase
LUX28_RS01625	COG1288	antiporter activity
LUX28_RS01635	COG0366	Alpha amylase catalytic
LUX28_RS01645	COG2814	Major facilitator Superfamily
LUX28_RS01650	COG1846	Transcriptional regulator
LUX28_RS01655	COG1280	lysine exporter protein (LysE YggA)
LUX28_RS01660	COG3403	YqcI/YcgG family
LUX28_RS01665	COG1113	amino acid transport
LUX28_RS01670	COG3665	Urea carboxylase-associated protein
LUX28_RS01685	COG1660	Displays ATPase and GTPase activities
LUX28_RS01690	COG1082	Xylose isomerase domain protein TIM barrel
LUX28_RS01695	COG2271	Major facilitator Superfamily
LUX28_RS01700	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LUX28_RS01705	COG3458	cephalosporin-C deacetylase activity
LUX28_RS01710	COG3541	Predicted nucleotidyltransferase
LUX28_RS01715	COG0506	proline dehydrogenase activity
LUX28_RS01720	COG1012	belongs to the aldehyde dehydrogenase family
LUX28_RS01725	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LUX28_RS01730	COG2508	Transcriptional regulator
LUX28_RS01740	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LUX28_RS01740	COG1587	Uroporphyrinogen-III synthase
LUX28_RS01745	COG2146	nitrite reductase [NAD(P)H] activity
LUX28_RS01750	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LUX28_RS01755	COG0243	molybdopterin cofactor binding
LUX28_RS01760	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LUX28_RS01765	COG2223	nitrite transmembrane transporter activity
LUX28_RS01770	COG0523	cobalamin synthesis protein
LUX28_RS01775	COG1063	alcohol dehydrogenase
LUX28_RS01780	COG1714	RDD family
LUX28_RS01790	COG2723	6-phospho-beta-galactosidase activity
LUX28_RS01800	COG3209	COG3209 Rhs family protein
LUX28_RS01805	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
LUX28_RS01810	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
LUX28_RS01815	COG1733	regulation of RNA biosynthetic process
LUX28_RS01820	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS01835	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS01845	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS01850	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
LUX28_RS01865	COG2364	Membrane
LUX28_RS01870	COG1126	abc transporter atp-binding protein
LUX28_RS01875	COG0765	amino acid transport
LUX28_RS01880	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LUX28_RS01885	COG0583	DNA-binding transcription factor activity
LUX28_RS01890	COG0163	prenyltransferase activity
LUX28_RS01895	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
LUX28_RS01910	COG3104	oligopeptide transport
LUX28_RS01915	COG5434	Belongs to the glycosyl hydrolase 28 family
LUX28_RS01925	COG0697	spore germination
LUX28_RS01935	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
LUX28_RS01940	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LUX28_RS01945	COG0456	acetyltransferase
LUX28_RS01950	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LUX28_RS01955	COG0765	amino acid transport
LUX28_RS01960	COG1126	abc transporter atp-binding protein
LUX28_RS01965	COG1473	amidohydrolase
LUX28_RS01970	COG2079	MmgE PrpD family protein
LUX28_RS01975	COG1136	(ABC) transporter
LUX28_RS01980	COG0577	efflux transmembrane transporter activity
LUX28_RS01985	COG0745	RESPONSE REGULATOR receiver
LUX28_RS01990	COG3850	Histidine kinase
LUX28_RS01990	COG5002	protein histidine kinase activity
LUX28_RS01995	COG0457	Tetratricopeptide repeat
LUX28_RS02010	COG0527	aspartate kinase activity
LUX28_RS02015	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LUX28_RS02020	COG4605	iron ion homeostasis
LUX28_RS02025	COG4604	ABC transporter, ATP-binding protein
LUX28_RS02030	COG4607	ABC-type enterochelin transport system periplasmic component
LUX28_RS02035	COG2814	Major facilitator Superfamily
LUX28_RS02040	COG1309	transcriptional regulator
LUX28_RS02045	COG0778	Nitroreductase
LUX28_RS02050	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
LUX28_RS02055	COG0640	Transcriptional regulator
LUX28_RS02060	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LUX28_RS02065	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LUX28_RS02070	COG1012	belongs to the aldehyde dehydrogenase family
LUX28_RS02075	COG4975	Glucose uptake
LUX28_RS02080	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS02085	COG4549	nuclear export factor GLE1
LUX28_RS02090	COG1276	copper resistance
LUX28_RS02090	COG2372	response to copper ion
LUX28_RS02095	COG1349	DNA-binding transcription factor activity
LUX28_RS02105	COG2213	PTS system mannitol-specific
LUX28_RS02110	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LUX28_RS02120	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LUX28_RS02130	COG0561	phosphatase activity
LUX28_RS02140	COG1914	H( )-stimulated, divalent metal cation uptake system
LUX28_RS02150	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LUX28_RS02155	COG1984	allophanate hydrolase subunit 2
LUX28_RS02160	COG1414	Transcriptional regulator
LUX28_RS02165	COG2755	lipolytic protein G-D-S-L family
LUX28_RS02175	COG2329	Antibiotic biosynthesis monooxygenase
LUX28_RS02180	COG0768	penicillin binding
LUX28_RS02185	COG4989	oxidoreductase activity
LUX28_RS02190	COG3711	transcriptional antiterminator
LUX28_RS02195	COG0318	PFAM AMP-dependent synthetase and ligase
LUX28_RS02200	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS02205	COG1917	Cupin 2, conserved barrel domain protein
LUX28_RS02210	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LUX28_RS02215	COG3871	stress protein (general stress protein 26)
LUX28_RS02225	COG2814	Major facilitator Superfamily
LUX28_RS02230	COG1522	sequence-specific DNA binding
LUX28_RS02235	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LUX28_RS02235	COG0551	DNA topoisomerase type I activity
LUX28_RS02240	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
LUX28_RS02245	COG3706	GGDEF domain
LUX28_RS02250	COG5298	Protein conserved in bacteria
LUX28_RS02255	COG1215	transferase activity, transferring glycosyl groups
LUX28_RS02265	COG0531	amino acid
LUX28_RS02275	COG0028	Belongs to the TPP enzyme family
LUX28_RS02325	COG1914	H( )-stimulated, divalent metal cation uptake system
LUX28_RS02345	COG2076	Multidrug Resistance protein
LUX28_RS02350	COG2217	Heavy metal translocating P-type atpase
LUX28_RS02355	COG3729	General stress protein
LUX28_RS02360	COG0662	Cupin 2, conserved barrel domain protein
LUX28_RS02365	COG2329	Antibiotic biosynthesis monooxygenase
LUX28_RS02370	COG3546	catalase activity
LUX28_RS02375	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
LUX28_RS02380	COG3290	protein histidine kinase activity
LUX28_RS02385	COG4565	transcriptional regulatory protein
LUX28_RS02390	COG1301	dicarboxylic acid transport
LUX28_RS02395	COG0628	permease
LUX28_RS02400	COG1131	(ABC) transporter
LUX28_RS02405	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
LUX28_RS02415	COG1960	acyl-CoA dehydrogenase activity
LUX28_RS02430	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LUX28_RS02435	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LUX28_RS02445	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LUX28_RS02450	COG0513	Belongs to the DEAD box helicase family
LUX28_RS02455	COG3402	PFAM membrane-flanked domain
LUX28_RS02460	COG3428	Bacterial PH domain
LUX28_RS02465	COG0705	Rhomboid family
LUX28_RS02475	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
LUX28_RS02480	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LUX28_RS02485	COG0864	Transcriptional regulator
LUX28_RS02490	COG2337	Toxic component of a toxin-antitoxin (TA) module
LUX28_RS02495	COG1366	Belongs to the anti-sigma-factor antagonist family
LUX28_RS02500	COG1366	Belongs to the anti-sigma-factor antagonist family
LUX28_RS02505	COG2172	sigma factor antagonist activity
LUX28_RS02510	COG2208	phosphoserine phosphatase activity
LUX28_RS02515	COG1366	Belongs to the anti-sigma-factor antagonist family
LUX28_RS02525	COG1191	sigma factor activity
LUX28_RS02530	COG2208	phosphoserine phosphatase activity
LUX28_RS02535	COG2183	response to ionizing radiation
LUX28_RS02605	COG1959	2 iron, 2 sulfur cluster binding
LUX28_RS02620	COG0457	Tetratricopeptide repeat
LUX28_RS02645	COG0477	Major facilitator Superfamily
LUX28_RS02660	COG2030	dehydratase
LUX28_RS02675	COG1959	2 iron, 2 sulfur cluster binding
LUX28_RS02680	COG2910	NAD(P)H-binding
LUX28_RS02685	COG1278	Cold shock
LUX28_RS02690	COG1329	Transcriptional regulator
LUX28_RS02695	COG1937	Protein conserved in bacteria
LUX28_RS02700	COG2210	Belongs to the sulfur carrier protein TusA family
LUX28_RS02705	COG1054	Belongs to the UPF0176 family
LUX28_RS02710	COG0425	Belongs to the sulfur carrier protein TusA family
LUX28_RS02710	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LUX28_RS02720	COG0425	Belongs to the sulfur carrier protein TusA family
LUX28_RS02725	COG0730	response to heat
LUX28_RS02730	COG1794	racemase activity, acting on amino acids and derivatives
LUX28_RS02745	COG3621	Patatin-like phospholipase
LUX28_RS02755	COG0662	Cupin 2, conserved barrel domain protein
LUX28_RS02770	COG0277	FAD linked oxidase domain protein
LUX28_RS02795	COG0662	Cupin 2, conserved barrel domain protein
LUX28_RS02800	COG2318	DinB family
LUX28_RS02805	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LUX28_RS02840	COG0351	phosphomethylpyrimidine kinase
LUX28_RS02855	COG1064	alcohol dehydrogenase
LUX28_RS02860	COG0789	Transcriptional regulator
LUX28_RS02870	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LUX28_RS02885	COG2814	Major facilitator Superfamily
LUX28_RS02890	COG1309	transcriptional regulator
LUX28_RS02895	COG0697	spore germination
LUX28_RS02900	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LUX28_RS02905	COG5577	PFAM Coat F domain
LUX28_RS02915	COG1063	alcohol dehydrogenase
LUX28_RS02920	COG5577	PFAM Coat F domain
LUX28_RS02935	COG4585	Histidine kinase
LUX28_RS02940	COG2197	response regulator
LUX28_RS02945	COG2409	Drug exporters of the RND superfamily
LUX28_RS02950	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
LUX28_RS02955	COG0488	(ABC) transporter
LUX28_RS02960	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LUX28_RS02965	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LUX28_RS02975	COG2814	Major facilitator Superfamily
LUX28_RS02980	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LUX28_RS02990	COG0730	response to heat
LUX28_RS02995	COG0456	acetyltransferase
LUX28_RS03005	COG1051	belongs to the nudix hydrolase family
LUX28_RS03010	COG2226	methyltransferase
LUX28_RS03015	COG0473	3-isopropylmalate dehydrogenase activity
LUX28_RS03020	COG1802	Transcriptional regulator
LUX28_RS03025	COG1819	glycosyl
LUX28_RS03040	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LUX28_RS03050	COG1388	LysM domain
LUX28_RS03055	COG2814	Major facilitator Superfamily
LUX28_RS03060	COG2188	Transcriptional regulator
LUX28_RS03065	COG2186	Transcriptional regulator
LUX28_RS03070	COG2807	transmembrane transport
LUX28_RS03075	COG2076	Multidrug Resistance protein
LUX28_RS03080	COG2076	Multidrug Resistance protein
LUX28_RS03085	COG1309	transcriptional regulator
LUX28_RS03090	COG0531	amino acid
LUX28_RS03100	COG3832	glyoxalase III activity
LUX28_RS03105	COG0604	alcohol dehydrogenase
LUX28_RS03110	COG2814	Major facilitator Superfamily
LUX28_RS03150	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
LUX28_RS03155	COG0802	atpase or kinase
LUX28_RS03160	COG1214	PFAM Peptidase M22, glycoprotease
LUX28_RS03165	COG0456	acetyltransferase
LUX28_RS03170	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LUX28_RS03175	COG0488	(ABC) transporter
LUX28_RS03190	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LUX28_RS03195	COG0805	protein transport
LUX28_RS03205	COG1266	CAAX protease self-immunity
LUX28_RS03225	COG2856	Zn peptidase
LUX28_RS03235	COG1396	sequence-specific DNA binding
LUX28_RS03280	COG5377	YqaJ viral recombinase family
LUX28_RS03285	COG3723	Recombinational DNA repair protein, rece pathway
LUX28_RS03290	COG3935	DnaD domain protein
LUX28_RS03295	COG1484	DNA-dependent DNA replication
LUX28_RS03395	COG1595	DNA-templated transcription, initiation
LUX28_RS03420	COG5484	DNA packaging
LUX28_RS03570	COG0457	Tetratricopeptide repeat
LUX28_RS03575	COG1063	alcohol dehydrogenase
LUX28_RS03580	COG2211	Major facilitator Superfamily
LUX28_RS03585	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LUX28_RS03595	COG1842	Phage shock protein A
LUX28_RS03600	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LUX28_RS03605	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
LUX28_RS03610	COG4260	virion core protein, lumpy skin disease virus
LUX28_RS03615	COG2755	lipolytic protein G-D-S-L family
LUX28_RS03615	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
LUX28_RS03625	COG1595	DNA-templated transcription, initiation
LUX28_RS03630	COG1063	alcohol dehydrogenase
LUX28_RS03635	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LUX28_RS03640	COG0823	Involved in the tonB-independent uptake of proteins
LUX28_RS03655	COG2132	Multicopper oxidase
LUX28_RS03660	COG1113	amino acid transport
LUX28_RS03665	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LUX28_RS03670	COG0714	Associated with various cellular activities
LUX28_RS03675	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
LUX28_RS03680	COG1305	Transglutaminase-like
LUX28_RS03705	COG2252	PERMEase
LUX28_RS03710	COG3064	Membrane
LUX28_RS03730	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LUX28_RS03735	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LUX28_RS03740	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LUX28_RS03745	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
LUX28_RS03750	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LUX28_RS03765	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LUX28_RS03775	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LUX28_RS03780	COG0138	bifunctional purine biosynthesis protein purh
LUX28_RS03785	COG0151	Belongs to the GarS family
LUX28_RS03795	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
LUX28_RS03800	COG1470	cell adhesion involved in biofilm formation
LUX28_RS03805	COG4496	protein, YerC YecD
LUX28_RS03810	COG0069	glutamate synthase activity
LUX28_RS03820	COG0210	DNA helicase
LUX28_RS03830	COG4851	CamS sex pheromone cAM373 precursor
LUX28_RS03835	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LUX28_RS03840	COG1285	pathogenesis
LUX28_RS03845	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LUX28_RS03865	COG1309	transcriptional regulator
LUX28_RS03870	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LUX28_RS03875	COG1597	lipid kinase activity
LUX28_RS03880	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LUX28_RS03890	COG1131	(ABC) transporter
LUX28_RS03920	COG5444	nuclease activity
LUX28_RS03950	COG3546	catalase activity
LUX28_RS03955	COG0454	-acetyltransferase
LUX28_RS03965	COG2323	membrane
LUX28_RS03970	COG2329	Antibiotic biosynthesis monooxygenase
LUX28_RS03975	COG0346	lactoylglutathione lyase activity
LUX28_RS03980	COG1366	Belongs to the anti-sigma-factor antagonist family
LUX28_RS03985	COG5583	Uncharacterized small protein (DUF2292)
LUX28_RS03990	COG0196	riboflavin kinase activity
LUX28_RS03995	COG0670	Belongs to the BI1 family
LUX28_RS04005	COG1846	Transcriptional regulator
LUX28_RS04010	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LUX28_RS04020	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LUX28_RS04020	COG2124	cytochrome p450
LUX28_RS04025	COG1368	sulfuric ester hydrolase activity
LUX28_RS04030	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LUX28_RS04035	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LUX28_RS04040	COG1442	glycosyl transferase family 8
LUX28_RS04045	COG1216	Glycosyl transferase, family 2
LUX28_RS04050	COG1442	glycosyl transferase family 8
LUX28_RS04055	COG2223	nitrite transmembrane transporter activity
LUX28_RS04060	COG0531	amino acid
LUX28_RS04065	COG1012	belongs to the aldehyde dehydrogenase family
LUX28_RS04070	COG0840	transmembrane signaling receptor activity
LUX28_RS04075	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS04080	COG0457	Tetratricopeptide repeat
LUX28_RS04080	COG0463	Glycosyl transferase, family 2
LUX28_RS04085	COG0488	(ABC) transporter
LUX28_RS04090	COG0789	Transcriptional regulator
LUX28_RS04095	COG2814	Major facilitator Superfamily
LUX28_RS04100	COG0488	(ABC) transporter
LUX28_RS04105	COG0513	Belongs to the DEAD box helicase family
LUX28_RS04110	COG0456	acetyltransferase
LUX28_RS04115	COG2130	NADP-dependent
LUX28_RS04130	COG3866	Pectate lyase
LUX28_RS04135	COG0471	metal ion transport
LUX28_RS04165	COG3290	protein histidine kinase activity
LUX28_RS04170	COG4565	transcriptional regulatory protein
LUX28_RS04175	COG3181	Tripartite tricarboxylate transporter family receptor
LUX28_RS04180	COG2851	Citrate transporter
LUX28_RS04185	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LUX28_RS04190	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
LUX28_RS04200	COG2258	MOSC domain
LUX28_RS04220	COG0024	Methionine aminopeptidase
LUX28_RS04225	COG1263	PTS System
LUX28_RS04225	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LUX28_RS04235	COG1368	sulfuric ester hydrolase activity
LUX28_RS04245	COG0071	Belongs to the small heat shock protein (HSP20) family
LUX28_RS04260	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LUX28_RS04260	COG1263	PTS System
LUX28_RS04265	COG0366	Alpha amylase catalytic
LUX28_RS04270	COG2188	Transcriptional regulator
LUX28_RS04275	COG0778	Nitroreductase
LUX28_RS04290	COG0737	Belongs to the 5'-nucleotidase family
LUX28_RS04295	COG0693	protein deglycase activity
LUX28_RS04300	COG1609	Transcriptional regulator
LUX28_RS04315	COG2814	Major facilitator Superfamily
LUX28_RS04325	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LUX28_RS04330	COG4980	gas vesicle protein
LUX28_RS04335	COG1295	ribonuclease BN
LUX28_RS04340	COG0477	Major facilitator Superfamily
LUX28_RS04345	COG0387	Pfam Sodium calcium exchanger
LUX28_RS04355	COG0668	transmembrane transport
LUX28_RS04360	COG0535	radical SAM domain protein
LUX28_RS04370	COG0726	polysaccharide deacetylase
LUX28_RS04375	COG2084	Dehydrogenase
LUX28_RS04385	COG0598	Magnesium transport protein CorA
LUX28_RS04390	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LUX28_RS04395	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LUX28_RS04410	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LUX28_RS04415	COG4637	Psort location Cytoplasmic, score
LUX28_RS04420	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LUX28_RS04425	COG0022	dehydrogenase e1 component
LUX28_RS04430	COG0508	dehydrogenase complex catalyzes the overall conversion of
LUX28_RS04435	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LUX28_RS04440	COG3284	Transcriptional regulator
LUX28_RS04450	COG1486	melibiose metabolic process
LUX28_RS04455	COG1737	Transcriptional regulator
LUX28_RS04460	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LUX28_RS04460	COG1263	PTS System
LUX28_RS04465	COG5434	Belongs to the glycosyl hydrolase 28 family
LUX28_RS04470	COG1132	(ABC) transporter
LUX28_RS04475	COG1132	(ABC) transporter
LUX28_RS04480	COG2259	Doxx family
LUX28_RS04485	COG2514	catechol 2,3-dioxygenase activity
LUX28_RS04495	COG1695	Transcriptional regulator
LUX28_RS04500	COG2249	NAD(P)H dehydrogenase (quinone) activity
LUX28_RS04505	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
LUX28_RS04515	COG3848	Pyruvate phosphate dikinase
LUX28_RS04515	COG0574	Belongs to the PEP-utilizing enzyme family
LUX28_RS04520	COG2732	(Barnase) inhibitor
LUX28_RS04525	COG2318	DinB family
LUX28_RS04530	COG2814	Major facilitator Superfamily
LUX28_RS04535	COG1846	Transcriptional regulator
LUX28_RS04540	COG0392	lysyltransferase activity
LUX28_RS04540	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LUX28_RS04545	COG0384	phenazine biosynthesis protein PhzF
LUX28_RS04550	COG0778	Nitroreductase
LUX28_RS04565	COG1090	epimerase
LUX28_RS04580	COG2814	Major facilitator Superfamily
LUX28_RS04590	COG3591	Belongs to the peptidase S1B family
LUX28_RS04605	COG3103	Sh3 type 3 domain protein
LUX28_RS04610	COG5658	integral membrane protein
LUX28_RS04615	COG0596	Alpha beta hydrolase
LUX28_RS04620	COG0463	Glycosyl transferase, family 2
LUX28_RS04625	COG4485	Bacterial membrane protein, YfhO
LUX28_RS04630	COG1988	membrane-bound metal-dependent
LUX28_RS04635	COG1194	a g-specific adenine glycosylase
LUX28_RS04645	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS04665	COG1132	(ABC) transporter
LUX28_RS04670	COG4129	membrane
LUX28_RS04680	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LUX28_RS04685	COG0735	belongs to the Fur family
LUX28_RS04800	COG3340	Belongs to the peptidase S51 family
LUX28_RS04810	COG0277	FAD linked oxidase domain protein
LUX28_RS04820	COG0747	negative chemotaxis
LUX28_RS04825	COG0601	transmembrane transport
LUX28_RS04830	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LUX28_RS04835	COG0444	Belongs to the ABC transporter superfamily
LUX28_RS04840	COG4608	Belongs to the ABC transporter superfamily
LUX28_RS04845	COG0753	catalase activity
LUX28_RS04855	COG1116	anion transmembrane transporter activity
LUX28_RS04860	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LUX28_RS04865	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LUX28_RS04885	COG1476	TRANSCRIPTIONal
LUX28_RS04895	COG3382	B3 4 domain protein
LUX28_RS04900	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LUX28_RS04910	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LUX28_RS04915	COG0789	Transcriptional regulator
LUX28_RS04920	COG1664	Polymer-forming cytoskeletal
LUX28_RS04925	COG1664	Polymer-forming cytoskeletal
LUX28_RS04930	COG2766	serine protein kinase
LUX28_RS04940	COG1846	Transcriptional regulator
LUX28_RS04945	COG1566	PFAM secretion protein HlyD family protein
LUX28_RS04950	COG2814	Major facilitator Superfamily
LUX28_RS04955	COG0655	NAD(P)H dehydrogenase (quinone) activity
LUX28_RS04970	COG1725	Transcriptional regulator
LUX28_RS04975	COG1131	(ABC) transporter
LUX28_RS04980	COG1131	(ABC) transporter
LUX28_RS04985	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
LUX28_RS04990	COG1278	Cold shock
LUX28_RS04995	COG1464	Belongs to the NlpA lipoprotein family
LUX28_RS05000	COG3706	GGDEF domain
LUX28_RS05005	COG1823	symporter activity
LUX28_RS05025	COG5577	PFAM Coat F domain
LUX28_RS05030	COG1525	nuclease
LUX28_RS05030	COG0737	Belongs to the 5'-nucleotidase family
LUX28_RS05030	COG4085	toxin activity
LUX28_RS05035	COG3764	Sortase (surface protein transpeptidase)
LUX28_RS05040	COG0564	pseudouridine synthase activity
LUX28_RS05050	COG0517	IMP dehydrogenase activity
LUX28_RS05055	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LUX28_RS05060	COG3153	acetyltransferase
LUX28_RS05060	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LUX28_RS05065	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LUX28_RS05070	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
LUX28_RS05075	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LUX28_RS05085	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LUX28_RS05090	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LUX28_RS05100	COG2197	response regulator
LUX28_RS05105	COG0431	NADPH-dependent FMN reductase
LUX28_RS05120	COG0791	NLP P60 protein
LUX28_RS05120	COG1388	LysM domain
LUX28_RS05125	COG1959	2 iron, 2 sulfur cluster binding
LUX28_RS05135	COG2719	SpoVR family
LUX28_RS05140	COG1785	Belongs to the alkaline phosphatase family
LUX28_RS05145	COG0791	NLP P60 protein
LUX28_RS05145	COG1388	LysM domain
LUX28_RS05150	COG0583	DNA-binding transcription factor activity
LUX28_RS05155	COG0372	Belongs to the citrate synthase family
LUX28_RS05160	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS05165	COG0531	amino acid
LUX28_RS05170	COG0733	neurotransmitter:sodium symporter activity
LUX28_RS05185	COG1595	DNA-templated transcription, initiation
LUX28_RS05190	COG0204	Acyl-transferase
LUX28_RS05195	COG1253	flavin adenine dinucleotide binding
LUX28_RS05200	COG0789	Transcriptional regulator
LUX28_RS05205	COG0436	Aminotransferase
LUX28_RS05210	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LUX28_RS05215	COG1253	flavin adenine dinucleotide binding
LUX28_RS05220	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LUX28_RS05225	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LUX28_RS05230	COG0584	glycerophosphoryl diester phosphodiesterase
LUX28_RS05240	COG0668	transmembrane transport
LUX28_RS05245	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LUX28_RS05250	COG0726	polysaccharide deacetylase
LUX28_RS05255	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LUX28_RS05260	COG3226	Transcriptional regulator
LUX28_RS05270	COG0589	response to stress
LUX28_RS05275	COG1132	(ABC) transporter
LUX28_RS05280	COG1132	(ABC) transporter
LUX28_RS05285	COG0702	epimerase
LUX28_RS05305	COG0189	ligase activity
LUX28_RS05310	COG0189	ligase activity
LUX28_RS05325	COG4335	DNA alkylation repair
LUX28_RS05330	COG0561	phosphatase activity
LUX28_RS05335	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LUX28_RS05345	COG0475	glutathione-regulated potassium exporter activity
LUX28_RS05350	COG0490	domain, Protein
LUX28_RS05360	COG1024	Enoyl-CoA hydratase
LUX28_RS05370	COG4152	abc transporter atp-binding protein
LUX28_RS05375	COG1668	transmembrane transport
LUX28_RS05380	COG0420	3'-5' exonuclease activity
LUX28_RS05385	COG4717	serine-type aminopeptidase activity
LUX28_RS05400	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LUX28_RS05435	COG4980	gas vesicle protein
LUX28_RS05450	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LUX28_RS05455	COG0537	adenosine 5'-monophosphoramidase activity
LUX28_RS05460	COG1131	(ABC) transporter
LUX28_RS05465	COG4473	ABC transporter
LUX28_RS05475	COG1473	amidohydrolase
LUX28_RS05480	COG3069	C4-dicarboxylate transmembrane transporter activity
LUX28_RS05485	COG2329	Antibiotic biosynthesis monooxygenase
LUX28_RS05490	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LUX28_RS05500	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
LUX28_RS05505	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LUX28_RS05510	COG1309	transcriptional regulator
LUX28_RS05515	COG1511	domain protein
LUX28_RS05520	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LUX28_RS05530	COG1363	Peptidase, m42
LUX28_RS05535	COG1301	dicarboxylic acid transport
LUX28_RS05545	COG1234	tRNA 3'-trailer cleavage
LUX28_RS05550	COG0095	Lipoate-protein ligase
LUX28_RS05555	COG0702	epimerase
LUX28_RS05560	COG0318	PFAM AMP-dependent synthetase and ligase
LUX28_RS05570	COG0501	Belongs to the peptidase M48B family
LUX28_RS05575	COG1404	Belongs to the peptidase S8 family
LUX28_RS05580	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
LUX28_RS05585	COG0406	alpha-ribazole phosphatase activity
LUX28_RS05590	COG0183	Belongs to the thiolase family
LUX28_RS05595	COG0318	PFAM AMP-dependent synthetase and ligase
LUX28_RS05600	COG1268	BioY protein
LUX28_RS05605	COG0840	transmembrane signaling receptor activity
LUX28_RS05610	COG0723	plastoquinol--plastocyanin reductase activity
LUX28_RS05610	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LUX28_RS05615	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS05625	COG4903	ComK protein
LUX28_RS05635	COG5646	InterPro IPR014922
LUX28_RS05660	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LUX28_RS05675	COG0398	Pfam SNARE associated Golgi protein
LUX28_RS05680	COG0681	Belongs to the peptidase S26 family
LUX28_RS05685	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LUX28_RS05690	COG1846	Transcriptional regulator
LUX28_RS05695	COG3180	Ammonia monooxygenase
LUX28_RS05700	COG2814	Major facilitator Superfamily
LUX28_RS05710	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
LUX28_RS05730	COG0420	3'-5' exonuclease activity
LUX28_RS05735	COG0419	ATPase involved in DNA repair
LUX28_RS05740	COG1403	HNH endonuclease
LUX28_RS05780	COG0179	Fumarylacetoacetate (FAA) hydrolase
LUX28_RS05800	COG0367	asparagine synthase
LUX28_RS05805	COG1562	ergosterol biosynthetic process
LUX28_RS05810	COG0534	Mate efflux family protein
LUX28_RS05815	COG2207	Transcriptional regulator
LUX28_RS05815	COG1917	Cupin 2, conserved barrel domain protein
LUX28_RS05820	COG2318	DinB family
LUX28_RS05825	COG1279	arginine transmembrane transporter activity
LUX28_RS05830	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LUX28_RS05835	COG1357	PFAM Pentapeptide repeats (8 copies)
LUX28_RS05840	COG2153	protein acetylation
LUX28_RS05845	COG0646	methionine synthase
LUX28_RS05845	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
LUX28_RS05855	COG2996	Protein conserved in bacteria
LUX28_RS05860	COG1744	ABC transporter substrate-binding protein PnrA-like
LUX28_RS05865	COG0840	transmembrane signaling receptor activity
LUX28_RS05870	COG2124	cytochrome p450
LUX28_RS05880	COG1307	EDD domain protein, DegV family
LUX28_RS05885	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LUX28_RS05905	COG0561	phosphatase activity
LUX28_RS05910	COG1073	alpha beta
LUX28_RS05915	COG2151	metal-sulfur cluster biosynthetic enzyme
LUX28_RS05925	COG0277	FAD linked oxidase domain protein
LUX28_RS05930	COG2271	Major facilitator Superfamily
LUX28_RS05940	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LUX28_RS05950	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LUX28_RS05955	COG0505	Belongs to the CarA family
LUX28_RS05960	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
LUX28_RS05965	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LUX28_RS05980	COG2267	carboxylic ester hydrolase activity
LUX28_RS05990	COG1744	ABC transporter substrate-binding protein PnrA-like
LUX28_RS06005	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LUX28_RS06015	COG5504	Zn-dependent protease
LUX28_RS06020	COG0444	Belongs to the ABC transporter superfamily
LUX28_RS06025	COG4608	Belongs to the ABC transporter superfamily
LUX28_RS06035	COG0601	transmembrane transport
LUX28_RS06040	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LUX28_RS06050	COG0180	Tryptophanyl-tRNA synthetase
LUX28_RS06055	COG4166	transmembrane transport
LUX28_RS06060	COG0601	transmembrane transport
LUX28_RS06065	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LUX28_RS06070	COG0444	Belongs to the ABC transporter superfamily
LUX28_RS06075	COG4608	Belongs to the ABC transporter superfamily
LUX28_RS06085	COG0456	acetyltransferase
LUX28_RS06090	COG1393	Belongs to the ArsC family
LUX28_RS06095	COG0861	Integral membrane protein TerC family
LUX28_RS06105	COG4862	establishment of competence for transformation
LUX28_RS06110	COG4469	Competence protein
LUX28_RS06115	COG1164	Oligoendopeptidase f
LUX28_RS06125	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LUX28_RS06130	COG2346	COG2346, Truncated hemoglobins
LUX28_RS06135	COG0741	lytic transglycosylase activity
LUX28_RS06140	COG4116	CYTH
LUX28_RS06150	COG2357	RelA SpoT domain protein
LUX28_RS06155	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LUX28_RS06160	COG0564	pseudouridine synthase activity
LUX28_RS06170	COG0475	glutathione-regulated potassium exporter activity
LUX28_RS06170	COG0569	domain protein
LUX28_RS06175	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LUX28_RS06180	COG0352	thiamine-phosphate diphosphorylase activity
LUX28_RS06185	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LUX28_RS06190	COG2104	thiamine diphosphate biosynthetic process
LUX28_RS06200	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LUX28_RS06205	COG0351	phosphomethylpyrimidine kinase
LUX28_RS06210	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
LUX28_RS06265	COG0210	DNA helicase
LUX28_RS06285	COG1131	(ABC) transporter
LUX28_RS06295	COG2153	protein acetylation
LUX28_RS06305	COG2382	esterase
LUX28_RS06310	COG0626	cystathionine gamma-synthase activity
LUX28_RS06315	COG0626	cystathionine gamma-synthase activity
LUX28_RS06390	COG0135	phosphoribosylanthranilate isomerase activity
LUX28_RS06400	COG2367	Beta-lactamase
LUX28_RS06405	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
LUX28_RS06410	COG0477	Major facilitator Superfamily
LUX28_RS06415	COG1846	Transcriptional regulator
LUX28_RS06425	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
LUX28_RS06430	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LUX28_RS06435	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LUX28_RS06440	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LUX28_RS06440	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LUX28_RS06445	COG1447	Phosphotransferase system cellobiose-specific component IIA
LUX28_RS06455	COG1349	DNA-binding transcription factor activity
LUX28_RS06470	COG1285	pathogenesis
LUX28_RS06485	COG2205	protein histidine kinase activity
LUX28_RS06495	COG3383	formate dehydrogenase (NAD+) activity
LUX28_RS06500	COG2427	Protein of unknown function (DUF1641)
LUX28_RS06505	COG2124	cytochrome p450
LUX28_RS06510	COG1819	glycosyl
LUX28_RS06520	COG1587	Uroporphyrinogen-III synthase
LUX28_RS06525	COG0390	transport system, permease component
LUX28_RS06530	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
LUX28_RS06535	COG0697	spore germination
LUX28_RS06540	COG4297	protein containing double-stranded beta helix domain
LUX28_RS06550	COG1252	NADH dehydrogenase
LUX28_RS06560	COG2211	Major facilitator Superfamily
LUX28_RS06565	COG1609	Transcriptional regulator
LUX28_RS06570	COG0246	Mannitol dehydrogenase
LUX28_RS06575	COG2721	sulfolactate sulfo-lyase activity
LUX28_RS06580	COG0730	response to heat
LUX28_RS06585	COG2318	DinB family
LUX28_RS06590	COG0457	Tetratricopeptide repeat
LUX28_RS06600	COG1388	LysM domain
LUX28_RS06600	COG3409	Peptidoglycan-binding domain 1 protein
LUX28_RS06600	COG5632	N-Acetylmuramoyl-L-alanine amidase
LUX28_RS06610	COG4195	phage-related replication protein
LUX28_RS06615	COG3546	catalase activity
LUX28_RS06620	COG2856	Zn peptidase
LUX28_RS06625	COG1396	sequence-specific DNA binding
LUX28_RS06635	COG1522	sequence-specific DNA binding
LUX28_RS06640	COG1484	DNA-dependent DNA replication
LUX28_RS06660	COG1595	DNA-templated transcription, initiation
LUX28_RS06665	COG3728	DNA packaging
LUX28_RS06665	COG5484	DNA packaging
LUX28_RS06670	COG1783	phage Terminase large subunit
LUX28_RS06675	COG5518	Phage portal protein
LUX28_RS06680	COG0338	D12 class N6 adenine-specific DNA methyltransferase
LUX28_RS06685	COG4653	Phage capsid family
LUX28_RS06735	COG3953	SLT domain
LUX28_RS06735	COG5412	phage tail tape measure protein
LUX28_RS06735	COG3953	SLT domain
LUX28_RS06735	COG5412	phage tail tape measure protein
LUX28_RS06735	COG5412	phage tail tape measure protein
LUX28_RS06735	COG3953	SLT domain
LUX28_RS06740	COG1652	LysM domain
LUX28_RS06745	COG4193	domain, Protein
LUX28_RS06755	COG3628	GPW Gp25 family protein
LUX28_RS06760	COG3299	homolog of phage Mu protein gp47
LUX28_RS06765	COG3778	Protein conserved in bacteria
LUX28_RS06805	COG3409	Peptidoglycan-binding domain 1 protein
LUX28_RS06805	COG5632	N-Acetylmuramoyl-L-alanine amidase
LUX28_RS06825	COG0306	phosphate transporter
LUX28_RS06830	COG1392	Phosphate transport regulator
LUX28_RS06835	COG0531	amino acid
LUX28_RS06840	COG0346	lactoylglutathione lyase activity
LUX28_RS06845	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LUX28_RS06850	COG0463	Glycosyl transferase, family 2
LUX28_RS06855	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LUX28_RS06860	COG0477	Major facilitator Superfamily
LUX28_RS06865	COG2362	D-Aminopeptidase
LUX28_RS06870	COG0601	transmembrane transport
LUX28_RS06875	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LUX28_RS06880	COG0444	Belongs to the ABC transporter superfamily
LUX28_RS06885	COG4166	transmembrane transport
LUX28_RS06890	COG1619	proteins homologs of microcin C7 resistance protein MccF
LUX28_RS06895	COG4948	Mandelate Racemase Muconate Lactonizing
LUX28_RS06900	COG0791	NLP P60 protein
LUX28_RS06905	COG4608	Belongs to the ABC transporter superfamily
LUX28_RS06910	COG2706	6-phosphogluconolactonase activity
LUX28_RS06915	COG1834	amidinotransferase
LUX28_RS06920	COG1607	acyl-coa hydrolase
LUX28_RS06925	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LUX28_RS06930	COG2076	Multidrug Resistance protein
LUX28_RS06935	COG2076	Multidrug Resistance protein
LUX28_RS06940	COG0788	formyltetrahydrofolate deformylase activity
LUX28_RS06945	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LUX28_RS06955	COG1764	response to oxidative stress
LUX28_RS06960	COG1846	Transcriptional regulator
LUX28_RS06965	COG1764	response to oxidative stress
LUX28_RS06980	COG0463	Glycosyl transferase, family 2
LUX28_RS06980	COG0457	Tetratricopeptide repeat
LUX28_RS06990	COG2814	Major facilitator Superfamily
LUX28_RS07005	COG1404	Belongs to the peptidase S8 family
LUX28_RS07010	COG1366	Belongs to the anti-sigma-factor antagonist family
LUX28_RS07015	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LUX28_RS07020	COG1122	ATPase activity
LUX28_RS07025	COG4721	ABC-type cobalt transport system, permease component
LUX28_RS07030	COG1388	LysM domain
LUX28_RS07030	COG3858	chitin binding
LUX28_RS07040	COG2239	Acts as a magnesium transporter
LUX28_RS07045	COG0789	Transcriptional regulator
LUX28_RS07060	COG1846	Transcriptional regulator
LUX28_RS07065	COG0726	polysaccharide deacetylase
LUX28_RS07070	COG1793	dna ligase
LUX28_RS07070	COG3285	dna ligase
LUX28_RS07075	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
LUX28_RS07080	COG0586	Pfam SNARE associated Golgi protein
LUX28_RS07090	COG1191	sigma factor activity
LUX28_RS07115	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LUX28_RS07120	COG2323	membrane
LUX28_RS07130	COG3594	Acyltransferase
LUX28_RS07135	COG5002	protein histidine kinase activity
LUX28_RS07140	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LUX28_RS07160	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LUX28_RS07165	COG0436	Aminotransferase
LUX28_RS07195	COG3852	Histidine kinase
LUX28_RS07200	COG1846	Transcriptional regulator
LUX28_RS07205	COG1360	Flagellar Motor Protein
LUX28_RS07210	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LUX28_RS07215	COG0542	response to heat
LUX28_RS07220	COG3949	Membrane
LUX28_RS07235	COG0720	synthase
LUX28_RS07240	COG0602	queuosine metabolic process
LUX28_RS07250	COG1733	regulation of RNA biosynthetic process
LUX28_RS07255	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS07265	COG4641	Protein conserved in bacteria
LUX28_RS07265	COG1388	LysM domain
LUX28_RS07270	COG1388	LysM domain
LUX28_RS07275	COG3858	chitin binding
LUX28_RS07285	COG4873	Protein conserved in bacteria
LUX28_RS07295	COG3773	Cell wall hydrolase
LUX28_RS07300	COG2244	polysaccharide biosynthetic process
LUX28_RS07305	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LUX28_RS07310	COG2217	Heavy metal translocating P-type atpase
LUX28_RS07315	COG0006	proline dipeptidase activity
LUX28_RS07320	COG1609	Transcriptional regulator
LUX28_RS07325	COG3711	transcriptional antiterminator
LUX28_RS07330	COG1263	PTS System
LUX28_RS07330	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LUX28_RS07330	COG2190	(PTS) system
LUX28_RS07335	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LUX28_RS07340	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LUX28_RS07350	COG1533	DNA photolyase activity
LUX28_RS07355	COG0840	transmembrane signaling receptor activity
LUX28_RS07360	COG2084	Dehydrogenase
LUX28_RS07365	COG2340	Cysteine-rich secretory protein family
LUX28_RS07370	COG0768	penicillin binding
LUX28_RS07375	COG4191	Histidine kinase
LUX28_RS07380	COG0436	Aminotransferase
LUX28_RS07390	COG0784	Response regulator, receiver
LUX28_RS07390	COG0835	chemotaxis
LUX28_RS07400	COG2814	Major facilitator Superfamily
LUX28_RS07405	COG1376	ErfK ybiS ycfS ynhG family protein
LUX28_RS07410	COG1408	metallophosphoesterase
LUX28_RS07415	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS07425	COG2200	EAL domain
LUX28_RS07430	COG4703	Protein of unknown function (DUF1797)
LUX28_RS07435	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
LUX28_RS07445	COG0517	IMP dehydrogenase activity
LUX28_RS07450	COG0583	DNA-binding transcription factor activity
LUX28_RS07455	COG0716	FMN binding
LUX28_RS07465	COG0716	FMN binding
LUX28_RS07485	COG0668	transmembrane transport
LUX28_RS07490	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LUX28_RS07510	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LUX28_RS07515	COG0303	'Molybdopterin
LUX28_RS07520	COG1763	Mo-molybdopterin cofactor biosynthetic process
LUX28_RS07525	COG0314	molybdopterin synthase activity
LUX28_RS07530	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
LUX28_RS07540	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LUX28_RS07545	COG1136	(ABC) transporter
LUX28_RS07550	COG0577	efflux transmembrane transporter activity
LUX28_RS07555	COG1349	DNA-binding transcription factor activity
LUX28_RS07560	COG1105	Belongs to the carbohydrate kinase PfkB family
LUX28_RS07565	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LUX28_RS07565	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LUX28_RS07565	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LUX28_RS07570	COG0681	Belongs to the peptidase S26 family
LUX28_RS07580	COG0488	(ABC) transporter
LUX28_RS07585	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LUX28_RS07590	COG2309	aminopeptidase activity
LUX28_RS07600	COG1077	Cell shape determining protein MreB Mrl
LUX28_RS07605	COG2002	toxin-antitoxin pair type II binding
LUX28_RS07610	COG3852	Histidine kinase
LUX28_RS07615	COG2105	PFAM AIG2 family protein
LUX28_RS07615	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
LUX28_RS07620	COG0569	domain protein
LUX28_RS07630	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LUX28_RS07640	COG0561	phosphatase activity
LUX28_RS07645	COG0242	peptide deformylase activity
LUX28_RS07655	COG0497	DNA recombination
LUX28_RS07665	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS07665	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS07665	COG3321	synthase
LUX28_RS07665	COG4221	oxidoreductase activity
LUX28_RS07670	COG0300	oxidoreductase activity
LUX28_RS07670	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LUX28_RS07670	COG3321	synthase
LUX28_RS07670	COG4221	oxidoreductase activity
LUX28_RS07675	COG4221	oxidoreductase activity
LUX28_RS07675	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS07675	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS07675	COG3321	synthase
LUX28_RS07680	COG0300	oxidoreductase activity
LUX28_RS07680	COG3321	synthase
LUX28_RS07680	COG4221	oxidoreductase activity
LUX28_RS07680	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LUX28_RS07685	COG0300	oxidoreductase activity
LUX28_RS07685	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LUX28_RS07685	COG3321	synthase
LUX28_RS07685	COG4221	oxidoreductase activity
LUX28_RS07690	COG3321	synthase
LUX28_RS07690	COG4221	oxidoreductase activity
LUX28_RS07690	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LUX28_RS07690	COG0300	oxidoreductase activity
LUX28_RS07695	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS07695	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS07695	COG3321	synthase
LUX28_RS07695	COG4221	oxidoreductase activity
LUX28_RS07700	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LUX28_RS07705	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LUX28_RS07710	COG0022	dehydrogenase e1 component
LUX28_RS07715	COG0508	dehydrogenase complex catalyzes the overall conversion of
LUX28_RS07720	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LUX28_RS07725	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LUX28_RS07740	COG1982	Orn Lys Arg decarboxylase major
LUX28_RS07760	COG0483	inositol monophosphate 1-phosphatase activity
LUX28_RS07770	COG3227	Zinc metalloprotease (Elastase)
LUX28_RS07775	COG1595	DNA-templated transcription, initiation
LUX28_RS07795	COG1217	gtp-binding protein TYPA
LUX28_RS07805	COG4896	Protein conserved in bacteria
LUX28_RS07815	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
LUX28_RS07820	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
LUX28_RS07825	COG2066	Belongs to the glutaminase family
LUX28_RS07835	COG0772	Belongs to the SEDS family
LUX28_RS07840	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
LUX28_RS07855	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LUX28_RS07855	COG2010	Cytochrome c
LUX28_RS07860	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LUX28_RS07865	COG1845	cytochrome c oxidase, subunit III
LUX28_RS07870	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
LUX28_RS07875	COG3336	cytochrome c oxidase
LUX28_RS07885	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
LUX28_RS07890	COG2340	Cysteine-rich secretory protein family
LUX28_RS07905	COG3679	Belongs to the UPF0342 family
LUX28_RS07915	COG0742	ribosomal rna small subunit methyltransferase
LUX28_RS07925	COG3314	Sporulation integral membrane protein YlbJ
LUX28_RS07930	COG1752	Esterase of the alpha-beta hydrolase superfamily
LUX28_RS07935	COG3480	Lon protease (S16) C-terminal proteolytic domain
LUX28_RS07945	COG1399	metal-binding, possibly nucleic acid-binding protein
LUX28_RS07965	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LUX28_RS07985	COG4839	cell division protein FtsL
LUX28_RS07990	COG0768	penicillin binding
LUX28_RS07995	COG0768	penicillin binding
LUX28_RS08015	COG0772	Belongs to the SEDS family
LUX28_RS08030	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
LUX28_RS08035	COG0849	cell division
LUX28_RS08040	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LUX28_RS08045	COG4412	M6 family metalloprotease domain protein
LUX28_RS08045	COG1404	Belongs to the peptidase S8 family
LUX28_RS08055	COG1191	sigma factor activity
LUX28_RS08060	COG1191	sigma factor activity
LUX28_RS08065	COG1119	ATPase activity
LUX28_RS08075	COG1873	PFAM PRC-barrel domain
LUX28_RS08080	COG1496	oxidoreductase activity
LUX28_RS08085	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LUX28_RS08095	COG0762	integral membrane protein
LUX28_RS08100	COG2302	S4 RNA-binding domain
LUX28_RS08105	COG3599	regulation of cell shape
LUX28_RS08110	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LUX28_RS08115	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LUX28_RS08125	COG0564	pseudouridine synthase activity
LUX28_RS08135	COG2233	PERMEase
LUX28_RS08145	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
LUX28_RS08150	COG0505	Belongs to the CarA family
LUX28_RS08155	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
LUX28_RS08170	COG0284	orotidine-5'-phosphate decarboxylase activity
LUX28_RS08175	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LUX28_RS08185	COG0306	phosphate transporter
LUX28_RS08200	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LUX28_RS08205	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
LUX28_RS08210	COG1648	precorrin-2 dehydrogenase activity
LUX28_RS08220	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
LUX28_RS08225	COG1561	YicC-like family, N-terminal region
LUX28_RS08235	COG0194	GDP metabolic process
LUX28_RS08245	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LUX28_RS08250	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LUX28_RS08255	COG0242	peptide deformylase activity
LUX28_RS08265	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LUX28_RS08265	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LUX28_RS08275	COG0631	protein serine/threonine phosphatase activity
LUX28_RS08280	COG0515	serine threonine protein kinase
LUX28_RS08280	COG2815	serine threonine protein kinase
LUX28_RS08290	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LUX28_RS08295	COG1564	THIamine pyrophosphokinase
LUX28_RS08310	COG1302	Protein conserved in bacteria
LUX28_RS08315	COG1461	Dihydroxyacetone kinase
LUX28_RS08320	COG1760	l-serine dehydratase
LUX28_RS08325	COG1760	l-serine dehydratase
LUX28_RS08330	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LUX28_RS08345	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
LUX28_RS08350	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS08365	COG1196	nuclear chromosome segregation
LUX28_RS08370	COG0552	protein localization to endoplasmic reticulum
LUX28_RS08385	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LUX28_RS08395	COG1837	Belongs to the UPF0109 family
LUX28_RS08420	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LUX28_RS08435	COG2257	FlhB HrpN YscU SpaS Family
LUX28_RS08445	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LUX28_RS08450	COG0758	DNA mediated transformation
LUX28_RS08455	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LUX28_RS08465	COG4974	Belongs to the 'phage' integrase family
LUX28_RS08485	COG1815	bacterial-type flagellum-dependent cell motility
LUX28_RS08490	COG1558	bacterial-type flagellum-dependent cell motility
LUX28_RS08495	COG1677	Flagellar hook-basal body complex protein FliE
LUX28_RS08500	COG1766	The M ring may be actively involved in energy transduction
LUX28_RS08505	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LUX28_RS08510	COG1317	bacterial-type flagellum organization
LUX28_RS08515	COG1157	protein secretion by the type III secretion system
LUX28_RS08520	COG2882	bacterial-type flagellum organization
LUX28_RS08525	COG3334	PFAM MgtE intracellular
LUX28_RS08530	COG3144	bacterial-type flagellum assembly
LUX28_RS08535	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
LUX28_RS08540	COG4786	Flagellar basal body rod
LUX28_RS08545	COG1582	Flagellar protein (FlbD)
LUX28_RS08550	COG1580	Controls the rotational direction of flagella during chemotaxis
LUX28_RS08555	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LUX28_RS08560	COG1776	CheC inhibitor of MCP methylation
LUX28_RS08560	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LUX28_RS08565	COG2201	protein-glutamate methylesterase activity
LUX28_RS08570	COG3190	flagellar
LUX28_RS08575	COG1338	Plays a role in the flagellum-specific transport system
LUX28_RS08580	COG1987	bacterial-type flagellum assembly
LUX28_RS08585	COG1684	flagellar biosynthetic protein fliR
LUX28_RS08590	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LUX28_RS08595	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LUX28_RS08600	COG1419	protein localization to endoplasmic reticulum
LUX28_RS08605	COG0455	bacterial-type flagellum organization
LUX28_RS08610	COG2201	protein-glutamate methylesterase activity
LUX28_RS08615	COG0643	Histidine kinase
LUX28_RS08615	COG2198	Histidine kinase
LUX28_RS08620	COG0835	chemotaxis
LUX28_RS08625	COG1776	CheC inhibitor of MCP methylation
LUX28_RS08635	COG1191	sigma factor activity
LUX28_RS08665	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LUX28_RS08670	COG4589	Belongs to the CDS family
LUX28_RS08680	COG0750	zinc metalloprotease
LUX28_RS08700	COG0195	Participates in both transcription termination and antitermination
LUX28_RS08705	COG2740	Nucleic-acid-binding protein implicated in transcription termination
LUX28_RS08710	COG1358	cellular component organization or biogenesis
LUX28_RS08720	COG1550	Protein conserved in bacteria
LUX28_RS08735	COG0196	riboflavin kinase activity
LUX28_RS08750	COG0726	polysaccharide deacetylase
LUX28_RS08755	COG0612	Peptidase, M16
LUX28_RS08760	COG1873	PFAM PRC-barrel domain
LUX28_RS08765	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LUX28_RS08770	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LUX28_RS08775	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LUX28_RS08780	COG0527	aspartate kinase activity
LUX28_RS08790	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LUX28_RS08795	COG0740	serine-type endopeptidase activity
LUX28_RS08805	COG1674	ftsk spoiiie
LUX28_RS08805	COG4980	gas vesicle protein
LUX28_RS08810	COG2188	Transcriptional regulator
LUX28_RS08815	COG2814	Major facilitator Superfamily
LUX28_RS08820	COG1846	Transcriptional regulator
LUX28_RS08825	COG1033	growth of symbiont in host cell
LUX28_RS08825	COG2409	Drug exporters of the RND superfamily
LUX28_RS08830	COG0612	Peptidase, M16
LUX28_RS08835	COG0612	Peptidase, M16
LUX28_RS08840	COG0300	oxidoreductase activity
LUX28_RS08855	COG1426	Protein conserved in bacteria
LUX28_RS08860	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LUX28_RS08875	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LUX28_RS08885	COG1692	metallophosphoesterase
LUX28_RS08890	COG2359	stage V sporulation protein S
LUX28_RS08910	COG4550	Control of competence regulator ComK, YlbF/YmcA
LUX28_RS08935	COG0582	viral genome integration into host DNA
LUX28_RS08975	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LUX28_RS08980	COG3425	synthase
LUX28_RS08985	COG1024	Enoyl-CoA hydratase
LUX28_RS08990	COG1024	Enoyl-CoA hydratase
LUX28_RS08995	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS08995	COG0300	oxidoreductase activity
LUX28_RS08995	COG0318	PFAM AMP-dependent synthetase and ligase
LUX28_RS08995	COG3321	synthase
LUX28_RS08995	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS09000	COG3321	synthase
LUX28_RS09000	COG4221	oxidoreductase activity
LUX28_RS09000	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LUX28_RS09000	COG0300	oxidoreductase activity
LUX28_RS09005	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS09005	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS09005	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS09005	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LUX28_RS09005	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LUX28_RS09005	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS09005	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LUX28_RS09005	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LUX28_RS09005	COG3321	synthase
LUX28_RS09005	COG3321	synthase
LUX28_RS09010	COG4221	oxidoreductase activity
LUX28_RS09010	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS09010	COG3321	synthase
LUX28_RS09010	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS09015	COG3321	synthase
LUX28_RS09015	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
LUX28_RS09015	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LUX28_RS09015	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LUX28_RS09020	COG2124	cytochrome p450
LUX28_RS09025	COG3209	COG3209 Rhs family protein
LUX28_RS09030	COG3619	membrane
LUX28_RS09040	COG1404	Belongs to the peptidase S8 family
LUX28_RS09050	COG4195	phage-related replication protein
LUX28_RS09055	COG1764	response to oxidative stress
LUX28_RS09065	COG2076	Multidrug Resistance protein
LUX28_RS09105	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LUX28_RS09110	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LUX28_RS09115	COG4112	unkown
LUX28_RS09120	COG0860	N-Acetylmuramoyl-L-alanine amidase
LUX28_RS09125	COG0464	growth
LUX28_RS09130	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LUX28_RS09135	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
LUX28_RS09140	COG0789	Transcriptional regulator
LUX28_RS09145	COG0174	glutamine synthetase
LUX28_RS09155	COG4282	regulation of fungal-type cell wall biogenesis
LUX28_RS09180	COG2211	Major facilitator Superfamily
LUX28_RS09185	COG3507	Belongs to the glycosyl hydrolase 43 family
LUX28_RS09200	COG1070	Carbohydrate kinase
LUX28_RS09205	COG0574	Belongs to the PEP-utilizing enzyme family
LUX28_RS09205	COG3848	Pyruvate phosphate dikinase
LUX28_RS09220	COG2318	DinB family
LUX28_RS09225	COG1064	alcohol dehydrogenase
LUX28_RS09250	COG0456	acetyltransferase
LUX28_RS09270	COG3397	chitin binding
LUX28_RS09280	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LUX28_RS09295	COG5434	Belongs to the glycosyl hydrolase 28 family
LUX28_RS09300	COG0756	dUTP diphosphatase activity
LUX28_RS09310	COG4195	phage-related replication protein
LUX28_RS09345	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
LUX28_RS09355	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LUX28_RS09375	COG0785	Cytochrome C biogenesis protein
LUX28_RS09380	COG2201	protein-glutamate methylesterase activity
LUX28_RS09385	COG4846	Membrane protein involved in cytochrome C biogenesis
LUX28_RS09395	COG0071	Belongs to the small heat shock protein (HSP20) family
LUX28_RS09410	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LUX28_RS09415	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LUX28_RS09435	COG0824	Thioesterase
LUX28_RS09445	COG4841	protein insertion into membrane
LUX28_RS09455	COG1832	CoA-binding protein
LUX28_RS09460	COG0187	DNA topoisomerase II activity
LUX28_RS09465	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LUX28_RS09475	COG1115	amino acid carrier protein
LUX28_RS09485	COG1063	alcohol dehydrogenase
LUX28_RS09490	COG0800	Aldolase
LUX28_RS09495	COG1312	Catalyzes the dehydration of D-mannonate
LUX28_RS09500	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS09505	COG1609	Transcriptional regulator
LUX28_RS09510	COG2271	Major facilitator Superfamily
LUX28_RS09550	COG2205	protein histidine kinase activity
LUX28_RS09555	COG0745	RESPONSE REGULATOR receiver
LUX28_RS09565	COG3507	Belongs to the glycosyl hydrolase 43 family
LUX28_RS09590	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS09595	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LUX28_RS09600	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LUX28_RS09605	COG2610	gluconate transmembrane transporter activity
LUX28_RS09610	COG2124	cytochrome p450
LUX28_RS09630	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LUX28_RS09640	COG2246	polysaccharide biosynthetic process
LUX28_RS09645	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LUX28_RS09650	COG0586	Pfam SNARE associated Golgi protein
LUX28_RS09655	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
LUX28_RS09660	COG1024	Enoyl-CoA hydratase
LUX28_RS09665	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LUX28_RS09670	COG0511	ligase activity, forming carbon-carbon bonds
LUX28_RS09675	COG0439	Biotin carboxylase
LUX28_RS09680	COG0318	PFAM AMP-dependent synthetase and ligase
LUX28_RS09685	COG1960	acyl-CoA dehydrogenase activity
LUX28_RS09690	COG1649	PFAM Uncharacterised BCR, COG1649
LUX28_RS09700	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS09700	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
LUX28_RS09705	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS09710	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS09715	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS09720	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS09725	COG2027	D-alanyl-D-alanine carboxypeptidase
LUX28_RS09730	COG2017	converts alpha-aldose to the beta-anomer
LUX28_RS09735	COG0534	Mate efflux family protein
LUX28_RS09750	COG0582	viral genome integration into host DNA
LUX28_RS09755	COG0166	Belongs to the GPI family
LUX28_RS09760	COG0405	Gamma-glutamyltransferase
LUX28_RS09765	COG2814	Major facilitator Superfamily
LUX28_RS09770	COG0640	Transcriptional regulator
LUX28_RS09775	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LUX28_RS09785	COG0604	alcohol dehydrogenase
LUX28_RS09790	COG0493	'glutamate synthase
LUX28_RS09795	COG0067	glutamate synthase
LUX28_RS09795	COG0069	glutamate synthase activity
LUX28_RS09795	COG0070	glutamate synthase
LUX28_RS09800	COG0583	DNA-binding transcription factor activity
LUX28_RS09805	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LUX28_RS09820	COG0300	oxidoreductase activity
LUX28_RS09825	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
LUX28_RS09835	COG2814	Major facilitator Superfamily
LUX28_RS09840	COG1070	Carbohydrate kinase
LUX28_RS09845	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LUX28_RS09850	COG0243	molybdopterin cofactor binding
LUX28_RS09880	COG5444	nuclease activity
LUX28_RS09885	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LUX28_RS09890	COG2207	Transcriptional regulator
LUX28_RS09890	COG0662	Cupin 2, conserved barrel domain protein
LUX28_RS09895	COG1309	transcriptional regulator
LUX28_RS09900	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LUX28_RS09910	COG0640	Transcriptional regulator
LUX28_RS09915	COG0741	lytic transglycosylase activity
LUX28_RS09920	COG2322	membrane
LUX28_RS09935	COG1619	proteins homologs of microcin C7 resistance protein MccF
LUX28_RS09945	COG1388	LysM domain
LUX28_RS09945	COG3584	3D domain protein
LUX28_RS09950	COG0514	ATP-dependent DNA helicase (RecQ)
LUX28_RS09960	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LUX28_RS09965	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LUX28_RS09980	COG0071	Belongs to the small heat shock protein (HSP20) family
LUX28_RS10010	COG1012	belongs to the aldehyde dehydrogenase family
LUX28_RS10015	COG1657	PFAM Prenyltransferase squalene oxidase
LUX28_RS10020	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LUX28_RS10025	COG0733	neurotransmitter:sodium symporter activity
LUX28_RS10030	COG0385	Bile acid
LUX28_RS10035	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LUX28_RS10040	COG0508	dehydrogenase complex catalyzes the overall conversion of
LUX28_RS10050	COG4548	von Willebrand factor, type A
LUX28_RS10055	COG0714	Associated with various cellular activities
LUX28_RS10060	COG2032	superoxide dismutase activity
LUX28_RS10065	COG0791	NLP P60 protein
LUX28_RS10065	COG1388	LysM domain
LUX28_RS10070	COG1819	glycosyl
LUX28_RS10075	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LUX28_RS10080	COG0534	Mate efflux family protein
LUX28_RS10085	COG1366	Belongs to the anti-sigma-factor antagonist family
LUX28_RS10090	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
LUX28_RS10095	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
LUX28_RS10105	COG2962	Rard protein
LUX28_RS10120	COG1942	4-Oxalocrotonate Tautomerase
LUX28_RS10130	COG1733	regulation of RNA biosynthetic process
LUX28_RS10135	COG0778	Nitroreductase
LUX28_RS10140	COG0400	carboxylic ester hydrolase activity
LUX28_RS10145	COG0346	lactoylglutathione lyase activity
LUX28_RS10155	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LUX28_RS10165	COG2723	6-phospho-beta-galactosidase activity
LUX28_RS10170	COG2188	Transcriptional regulator
LUX28_RS10175	COG3409	Peptidoglycan-binding domain 1 protein
LUX28_RS10175	COG0793	Belongs to the peptidase S41A family
LUX28_RS10180	COG2226	methyltransferase
LUX28_RS10190	COG1876	peptidase activity
LUX28_RS10210	COG0671	phosphoesterase, PA-phosphatase related
LUX28_RS10245	COG1509	lysine 2,3-aminomutase activity
LUX28_RS10250	COG0456	acetyltransferase
LUX28_RS10255	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LUX28_RS10260	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LUX28_RS10265	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LUX28_RS10270	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LUX28_RS10275	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
LUX28_RS10285	COG0456	acetyltransferase
LUX28_RS10290	COG0463	Glycosyl transferase, family 2
LUX28_RS10305	COG4641	Protein conserved in bacteria
LUX28_RS10315	COG1086	Polysaccharide biosynthesis protein
LUX28_RS10365	COG1388	LysM domain
LUX28_RS10370	COG0457	Tetratricopeptide repeat
LUX28_RS10395	COG4282	regulation of fungal-type cell wall biogenesis
LUX28_RS10400	COG1525	nuclease
LUX28_RS10405	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
LUX28_RS10425	COG1846	Transcriptional regulator
LUX28_RS10430	COG4698	Protein conserved in bacteria
LUX28_RS10435	COG2755	lipolytic protein G-D-S-L family
LUX28_RS10440	COG1999	signal sequence binding
LUX28_RS10450	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LUX28_RS10455	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
LUX28_RS10460	COG1272	protein, Hemolysin III
LUX28_RS10465	COG0204	Acyl-transferase
LUX28_RS10470	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LUX28_RS10485	COG2521	methyltransferase
LUX28_RS10485	COG2136	Putative SAM-dependent methyltransferase
LUX28_RS10500	COG1413	lyase activity
LUX28_RS10505	COG1418	mRNA catabolic process
LUX28_RS10510	COG0386	Belongs to the glutathione peroxidase family
LUX28_RS10520	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LUX28_RS10530	COG1278	Cold shock
LUX28_RS10550	COG0328	RNA-DNA hybrid ribonuclease activity
LUX28_RS10555	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LUX28_RS10560	COG0328	RNA-DNA hybrid ribonuclease activity
LUX28_RS10570	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LUX28_RS10595	COG1755	Isoprenylcysteine carboxyl methyltransferase
LUX28_RS10600	COG3424	synthase
LUX28_RS10625	COG1335	isochorismatase
LUX28_RS10640	COG3331	DNA recombination
LUX28_RS10690	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
LUX28_RS10720	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LUX28_RS10725	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LUX28_RS10750	COG0756	dUTP diphosphatase activity
LUX28_RS10760	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LUX28_RS10770	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LUX28_RS10780	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LUX28_RS10780	COG1372	Participates in initiation and elongation during chromosome replication
LUX28_RS10785	COG1780	Probably involved in ribonucleotide reductase function
LUX28_RS10885	COG4133	protoheme IX ABC transporter activity
LUX28_RS10895	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LUX28_RS10905	COG3584	3D domain protein
LUX28_RS10945	COG2404	hydrolase activity, acting on ester bonds
LUX28_RS10965	COG3420	alginic acid biosynthetic process
LUX28_RS10965	COG5434	Belongs to the glycosyl hydrolase 28 family
LUX28_RS10970	COG4195	phage-related replication protein
LUX28_RS10990	COG2135	peptidase activity
LUX28_RS10995	COG1793	dna ligase
LUX28_RS11035	COG4474	Belongs to the UPF0398 family
LUX28_RS11100	COG3655	Transcriptional regulator
LUX28_RS11230	COG3655	Transcriptional regulator
LUX28_RS11235	COG3655	Transcriptional regulator
LUX28_RS11350	COG0776	regulation of translation
LUX28_RS11485	COG0582	viral genome integration into host DNA
LUX28_RS11505	COG1196	nuclear chromosome segregation
LUX28_RS11505	COG0739	heme binding
LUX28_RS11505	COG0741	lytic transglycosylase activity
LUX28_RS11515	COG2433	Pfam Transposase IS66
LUX28_RS11525	COG5434	Belongs to the glycosyl hydrolase 28 family
LUX28_RS11530	COG3409	Peptidoglycan-binding domain 1 protein
LUX28_RS11530	COG5632	N-Acetylmuramoyl-L-alanine amidase
LUX28_RS11550	COG0457	Tetratricopeptide repeat
LUX28_RS11555	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LUX28_RS11595	COG5444	nuclease activity
LUX28_RS11600	COG4282	regulation of fungal-type cell wall biogenesis
LUX28_RS11605	COG1525	nuclease
LUX28_RS11625	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
LUX28_RS11630	COG1199	ATP-dependent helicase activity
LUX28_RS11645	COG0116	Belongs to the methyltransferase superfamily
LUX28_RS11675	COG3359	exonuclease
LUX28_RS11680	COG1111	helicase
LUX28_RS11680	COG1205	dead DEAH box helicase
LUX28_RS11685	COG2190	(PTS) system
LUX28_RS11690	COG0071	Belongs to the small heat shock protein (HSP20) family
LUX28_RS11730	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LUX28_RS11730	COG4499	WXG100 protein secretion system (Wss), protein YukC
LUX28_RS11740	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LUX28_RS11745	COG3935	DnaD domain protein
LUX28_RS11755	COG0436	Aminotransferase
LUX28_RS11760	COG5353	protein conserved in bacteria
LUX28_RS11770	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LUX28_RS11770	COG1199	ATP-dependent helicase activity
LUX28_RS11800	COG0438	transferase activity, transferring glycosyl groups
LUX28_RS11805	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
LUX28_RS11820	COG1694	Mazg nucleotide pyrophosphohydrolase
LUX28_RS11825	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LUX28_RS11830	COG2140	Oxalate decarboxylase
LUX28_RS11840	COG4347	Protein of unknown function (DUF1405)
LUX28_RS11845	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LUX28_RS11845	COG2010	Cytochrome c
LUX28_RS11850	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LUX28_RS11855	COG0723	plastoquinol--plastocyanin reductase activity
LUX28_RS11870	COG0457	Tetratricopeptide repeat
LUX28_RS11885	COG0287	Prephenate dehydrogenase
LUX28_RS11920	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LUX28_RS11925	COG4401	Chorismate mutase type I
LUX28_RS11940	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LUX28_RS11945	COG0105	UTP biosynthetic process
LUX28_RS11950	COG0142	geranyltranstransferase activity
LUX28_RS11960	COG0142	geranyltranstransferase activity
LUX28_RS11975	COG0776	regulation of translation
LUX28_RS11980	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LUX28_RS12020	COG0539	negative regulation of cytoplasmic translation
LUX28_RS12035	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
LUX28_RS12040	COG2959	enzyme of heme biosynthesis
LUX28_RS12045	COG3409	Peptidoglycan-binding domain 1 protein
LUX28_RS12045	COG3773	Cell wall hydrolase
LUX28_RS12050	COG2339	peptidase activity
LUX28_RS12055	COG0492	ferredoxin-NADP+ reductase activity
LUX28_RS12060	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LUX28_RS12065	COG4862	establishment of competence for transformation
LUX28_RS12070	COG1408	metallophosphoesterase
LUX28_RS12080	COG1388	LysM domain
LUX28_RS12085	COG1266	CAAX protease self-immunity
LUX28_RS12090	COG0514	ATP-dependent DNA helicase (RecQ)
LUX28_RS12095	COG4955	Helix-turn-helix domain
LUX28_RS12100	COG1141	Ferredoxin
LUX28_RS12105	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LUX28_RS12110	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LUX28_RS12120	COG1595	DNA-templated transcription, initiation
LUX28_RS12125	COG5002	protein histidine kinase activity
LUX28_RS12130	COG0745	RESPONSE REGULATOR receiver
LUX28_RS12135	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LUX28_RS12140	COG1333	cytochrome c biogenesis protein
LUX28_RS12145	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LUX28_RS12150	COG1187	pseudouridine synthase activity
LUX28_RS12155	COG0700	Nucleoside recognition
LUX28_RS12160	COG2715	membrane protein required for spore maturation
LUX28_RS12165	COG1686	Belongs to the peptidase S11 family
LUX28_RS12190	COG1547	Domain of unknown function (DUF309)
LUX28_RS12195	COG0456	acetyltransferase
LUX28_RS12210	COG0307	riboflavin synthase, alpha
LUX28_RS12215	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LUX28_RS12215	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LUX28_RS12225	COG0681	Belongs to the peptidase S26 family
LUX28_RS12235	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LUX28_RS12240	COG4086	secreted protein
LUX28_RS12245	COG0019	diaminopimelate decarboxylase activity
LUX28_RS12250	COG0697	spore germination
LUX28_RS12265	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LUX28_RS12285	COG1191	sigma factor activity
LUX28_RS12295	COG1366	Belongs to the anti-sigma-factor antagonist family
LUX28_RS12300	COG1686	Belongs to the peptidase S11 family
LUX28_RS12305	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
LUX28_RS12310	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
LUX28_RS12315	COG4974	Belongs to the 'phage' integrase family
LUX28_RS12325	COG0735	belongs to the Fur family
LUX28_RS12330	COG1300	Membrane
LUX28_RS12345	COG0281	malic enzyme
LUX28_RS12350	COG1757	Na H antiporter
LUX28_RS12355	COG1027	Aspartate ammonia-lyase
LUX28_RS12360	COG0252	asparaginase activity
LUX28_RS12365	COG1396	sequence-specific DNA binding
LUX28_RS12370	COG1379	DNA repair
LUX28_RS12375	COG0494	nUDIX hydrolase
LUX28_RS12385	COG0667	Aldo Keto reductase
LUX28_RS12395	COG1073	alpha beta
LUX28_RS12405	COG4918	Iron-sulphur cluster biosynthesis
LUX28_RS12415	COG2329	Antibiotic biosynthesis monooxygenase
LUX28_RS12420	COG0456	acetyltransferase
LUX28_RS12425	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LUX28_RS12440	COG0628	permease
LUX28_RS12450	COG0346	lactoylglutathione lyase activity
LUX28_RS12460	COG3048	D-serine ammonia-lyase activity
LUX28_RS12465	COG0300	oxidoreductase activity
LUX28_RS12470	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LUX28_RS12475	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LUX28_RS12480	COG1024	Enoyl-CoA hydratase
LUX28_RS12485	COG3425	synthase
LUX28_RS12490	COG2124	cytochrome p450
LUX28_RS12495	COG3321	synthase
LUX28_RS12495	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LUX28_RS12495	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS12495	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LUX28_RS12495	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS12500	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LUX28_RS12500	COG3321	synthase
LUX28_RS12500	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS12500	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS12500	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LUX28_RS12505	COG0300	oxidoreductase activity
LUX28_RS12505	COG0318	PFAM AMP-dependent synthetase and ligase
LUX28_RS12505	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS12505	COG3321	synthase
LUX28_RS12505	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS12510	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS12510	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS12510	COG0318	PFAM AMP-dependent synthetase and ligase
LUX28_RS12510	COG0300	oxidoreductase activity
LUX28_RS12510	COG3321	synthase
LUX28_RS12515	COG3321	synthase
LUX28_RS12515	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS12515	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS12515	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LUX28_RS12515	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LUX28_RS12520	COG0300	oxidoreductase activity
LUX28_RS12520	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS12520	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS12520	COG3321	synthase
LUX28_RS12520	COG0318	PFAM AMP-dependent synthetase and ligase
LUX28_RS12525	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS12525	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS12525	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LUX28_RS12525	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LUX28_RS12525	COG3321	synthase
LUX28_RS12530	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS12535	COG0318	PFAM AMP-dependent synthetase and ligase
LUX28_RS12550	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
LUX28_RS12550	COG2070	2-Nitropropane dioxygenase
LUX28_RS12555	COG0250	Participates in transcription elongation, termination and antitermination
LUX28_RS12575	COG0596	Alpha beta hydrolase
LUX28_RS12590	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LUX28_RS12595	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LUX28_RS12610	COG0706	membrane insertase activity
LUX28_RS12615	COG2195	Cleaves the N-terminal amino acid of tripeptides
LUX28_RS12620	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
LUX28_RS12625	COG0346	lactoylglutathione lyase activity
LUX28_RS12635	COG1376	ErfK ybiS ycfS ynhG family protein
LUX28_RS12640	COG4129	membrane
LUX28_RS12645	COG1126	abc transporter atp-binding protein
LUX28_RS12650	COG0765	amino acid transport
LUX28_RS12655	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LUX28_RS12670	COG1597	lipid kinase activity
LUX28_RS12675	COG0508	dehydrogenase complex catalyzes the overall conversion of
LUX28_RS12680	COG0022	dehydrogenase e1 component
LUX28_RS12685	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LUX28_RS12690	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LUX28_RS12695	COG3426	butyrate kinase activity
LUX28_RS12700	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LUX28_RS12705	COG0280	phosphate acetyltransferase
LUX28_RS12710	COG3290	protein histidine kinase activity
LUX28_RS12710	COG3829	transcription factor binding
LUX28_RS12720	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
LUX28_RS12725	COG2079	MmgE PrpD family protein
LUX28_RS12730	COG0372	Belongs to the citrate synthase family
LUX28_RS12735	COG1960	acyl-CoA dehydrogenase activity
LUX28_RS12740	COG1250	3-hydroxyacyl-CoA dehydrogenase
LUX28_RS12745	COG0183	Belongs to the thiolase family
LUX28_RS12750	COG0584	glycerophosphoryl diester phosphodiesterase
LUX28_RS12755	COG0860	N-Acetylmuramoyl-L-alanine amidase
LUX28_RS12780	COG1902	pentaerythritol trinitrate reductase activity
LUX28_RS12795	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LUX28_RS12800	COG0745	RESPONSE REGULATOR receiver
LUX28_RS12805	COG0750	zinc metalloprotease
LUX28_RS12810	COG0497	DNA recombination
LUX28_RS12820	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
LUX28_RS12830	COG0142	geranyltranstransferase activity
LUX28_RS12840	COG1570	exodeoxyribonuclease VII activity
LUX28_RS12855	COG1302	Protein conserved in bacteria
LUX28_RS12860	COG0439	Biotin carboxylase
LUX28_RS12865	COG0511	ligase activity, forming carbon-carbon bonds
LUX28_RS12905	COG3854	ATPases associated with a variety of cellular activities
LUX28_RS12920	COG0006	proline dipeptidase activity
LUX28_RS12930	COG3872	metal-dependent enzyme
LUX28_RS12940	COG1752	Esterase of the alpha-beta hydrolase superfamily
LUX28_RS12955	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LUX28_RS12975	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LUX28_RS12990	COG1396	sequence-specific DNA binding
LUX28_RS13000	COG0681	Belongs to the peptidase S26 family
LUX28_RS13025	COG4940	Competence protein ComGF
LUX28_RS13035	COG4970	Tfp pilus assembly protein FimT
LUX28_RS13040	COG4537	Required for transformation and DNA binding
LUX28_RS13045	COG1459	type II secretion system
LUX28_RS13050	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LUX28_RS13055	COG0598	Magnesium transport protein CorA
LUX28_RS13060	COG1253	flavin adenine dinucleotide binding
LUX28_RS13065	COG1366	Belongs to the anti-sigma-factor antagonist family
LUX28_RS13075	COG1393	Belongs to the ArsC family
LUX28_RS13085	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LUX28_RS13095	COG0011	TIGRFAM Protein of
LUX28_RS13105	COG2866	Carboxypeptidase
LUX28_RS13110	COG1940	carbohydrate kinase activity
LUX28_RS13115	COG4483	Protein conserved in bacteria
LUX28_RS13120	COG1757	Na H antiporter
LUX28_RS13130	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LUX28_RS13145	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LUX28_RS13150	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
LUX28_RS13155	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
LUX28_RS13160	COG0581	inorganic phosphate transmembrane transporter activity
LUX28_RS13165	COG0573	inorganic phosphate transmembrane transporter activity
LUX28_RS13170	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LUX28_RS13175	COG0768	penicillin binding
LUX28_RS13180	COG0477	Major facilitator Superfamily
LUX28_RS13185	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LUX28_RS13190	COG2839	Protein conserved in bacteria
LUX28_RS13195	COG5521	maltodextrose utilization protein MalA
LUX28_RS13200	COG1388	LysM domain
LUX28_RS13210	COG4709	membrane
LUX28_RS13215	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
LUX28_RS13220	COG0735	belongs to the Fur family
LUX28_RS13225	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LUX28_RS13240	COG0513	Belongs to the DEAD box helicase family
LUX28_RS13255	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LUX28_RS13260	COG2384	SAM-dependent methyltransferase
LUX28_RS13265	COG2010	Cytochrome c
LUX28_RS13270	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LUX28_RS13275	COG0358	DNA primase activity
LUX28_RS13290	COG0517	IMP dehydrogenase activity
LUX28_RS13295	COG0751	glycine-tRNA ligase activity
LUX28_RS13315	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LUX28_RS13320	COG0295	cytidine deaminase activity
LUX28_RS13325	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LUX28_RS13335	COG1480	7TM receptor with intracellular HD hydrolase
LUX28_RS13340	COG1702	phosphate starvation-inducible protein PhoH
LUX28_RS13345	COG0561	phosphatase activity
LUX28_RS13360	COG4864	UPF0365 protein
LUX28_RS13365	COG1030	water channel activity
LUX28_RS13370	COG1610	YqeY-like protein
LUX28_RS13380	COG1283	sodium-dependent phosphate transmembrane transporter activity
LUX28_RS13385	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LUX28_RS13390	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LUX28_RS13420	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LUX28_RS13435	COG0860	N-Acetylmuramoyl-L-alanine amidase
LUX28_RS13465	COG0658	competence protein
LUX28_RS13465	COG2333	competence protein COMEC
LUX28_RS13470	COG2131	deaminase
LUX28_RS13475	COG1555	photosystem II stabilization
LUX28_RS13475	COG1596	polysaccharide export
LUX28_RS13480	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LUX28_RS13485	COG2226	methyltransferase
LUX28_RS13490	COG0799	negative regulation of ribosome biogenesis
LUX28_RS13495	COG1713	HD superfamily hydrolase involved in NAD metabolism
LUX28_RS13505	COG1534	Rna-binding protein
LUX28_RS13510	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LUX28_RS13515	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LUX28_RS13520	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
LUX28_RS13530	COG2755	lipolytic protein G-D-S-L family
LUX28_RS13540	COG0398	Pfam SNARE associated Golgi protein
LUX28_RS13565	COG1794	racemase activity, acting on amino acids and derivatives
LUX28_RS13580	COG0656	L-ascorbic acid biosynthetic process
LUX28_RS13615	COG5002	protein histidine kinase activity
LUX28_RS13615	COG0642	Histidine kinase
LUX28_RS13620	COG0745	RESPONSE REGULATOR receiver
LUX28_RS13625	COG2311	Membrane
LUX28_RS13635	COG0454	-acetyltransferase
LUX28_RS13640	COG0563	adenylate kinase activity
LUX28_RS13650	COG2814	Major facilitator Superfamily
LUX28_RS13655	COG0456	acetyltransferase
LUX28_RS13660	COG2318	DinB family
LUX28_RS13670	COG0561	phosphatase activity
LUX28_RS13675	COG0561	phosphatase activity
LUX28_RS13685	COG1482	cell wall glycoprotein biosynthetic process
LUX28_RS13690	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LUX28_RS13690	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LUX28_RS13690	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LUX28_RS13695	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LUX28_RS13695	COG3711	transcriptional antiterminator
LUX28_RS13705	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LUX28_RS13710	COG0583	DNA-binding transcription factor activity
LUX28_RS13715	COG2814	Major facilitator Superfamily
LUX28_RS13720	COG2124	cytochrome p450
LUX28_RS13720	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LUX28_RS13725	COG1309	transcriptional regulator
LUX28_RS13730	COG2226	methyltransferase
LUX28_RS13745	COG2116	formate transmembrane transporter activity
LUX28_RS13750	COG5609	conserved protein (DUF2294)
LUX28_RS13755	COG3383	formate dehydrogenase (NAD+) activity
LUX28_RS13760	COG2427	Protein of unknown function (DUF1641)
LUX28_RS13770	COG0626	cystathionine gamma-synthase activity
LUX28_RS13775	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LUX28_RS13800	COG0768	penicillin binding
LUX28_RS13825	COG5632	N-Acetylmuramoyl-L-alanine amidase
LUX28_RS13825	COG3409	Peptidoglycan-binding domain 1 protein
LUX28_RS13830	COG4824	toxin secretion phage lysis holin
LUX28_RS13850	COG5434	Belongs to the glycosyl hydrolase 28 family
LUX28_RS13855	COG1388	LysM domain
LUX28_RS13855	COG1705	Flagellar rod assembly protein muramidase FlgJ
LUX28_RS13930	COG4626	Terminase
LUX28_RS13930	COG1802	Transcriptional regulator
LUX28_RS13955	COG0582	viral genome integration into host DNA
LUX28_RS13960	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
LUX28_RS14080	COG1396	sequence-specific DNA binding
LUX28_RS14100	COG0826	peptidase U32
LUX28_RS14105	COG0826	peptidase U32
LUX28_RS14110	COG4122	O-methyltransferase activity
LUX28_RS14115	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LUX28_RS14130	COG4472	Bacterial protein of unknown function (DUF965)
LUX28_RS14140	COG0628	permease
LUX28_RS14145	COG1126	abc transporter atp-binding protein
LUX28_RS14150	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LUX28_RS14155	COG0765	amino acid transport
LUX28_RS14160	COG0765	amino acid transport
LUX28_RS14175	COG3881	PFAM PRC-barrel domain
LUX28_RS14180	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LUX28_RS14185	COG0457	Tetratricopeptide repeat
LUX28_RS14195	COG1104	cysteine desulfurase activity
LUX28_RS14200	COG1959	2 iron, 2 sulfur cluster binding
LUX28_RS14205	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LUX28_RS14210	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LUX28_RS14235	COG0860	N-Acetylmuramoyl-L-alanine amidase
LUX28_RS14235	COG3103	Sh3 type 3 domain protein
LUX28_RS14235	COG4991	sh3 domain protein
LUX28_RS14245	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LUX28_RS14255	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LUX28_RS14255	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
LUX28_RS14260	COG5416	Lipopolysaccharide assembly protein A domain
LUX28_RS14265	COG0490	domain, Protein
LUX28_RS14270	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LUX28_RS14270	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LUX28_RS14280	COG2244	polysaccharide biosynthetic process
LUX28_RS14285	COG2323	membrane
LUX28_RS14295	COG1862	Preprotein translocase
LUX28_RS14335	COG1388	LysM domain
LUX28_RS14345	COG0157	Belongs to the NadC ModD family
LUX28_RS14350	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LUX28_RS14355	COG1104	cysteine desulfurase activity
LUX28_RS14360	COG1827	regulation of RNA biosynthetic process
LUX28_RS14365	COG0077	Prephenate dehydratase
LUX28_RS14380	COG3290	protein histidine kinase activity
LUX28_RS14385	COG0211	Belongs to the bacterial ribosomal protein bL27 family
LUX28_RS14390	COG2868	ribosomal protein
LUX28_RS14400	COG1994	Peptidase M50
LUX28_RS14405	COG0739	heme binding
LUX28_RS14410	COG2894	cell division
LUX28_RS14420	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
LUX28_RS14430	COG1077	Cell shape determining protein MreB Mrl
LUX28_RS14450	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
LUX28_RS14455	COG0285	dihydrofolate synthase activity
LUX28_RS14460	COG0525	valine-tRNA ligase activity
LUX28_RS14470	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LUX28_RS14475	COG1388	LysM domain
LUX28_RS14485	COG0113	porphobilinogen synthase activity
LUX28_RS14490	COG1587	Uroporphyrinogen-III synthase
LUX28_RS14500	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LUX28_RS14520	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LUX28_RS14525	COG0470	DNA polymerase III
LUX28_RS14525	COG1067	ATP-dependent peptidase activity
LUX28_RS14540	COG1477	protein flavinylation
LUX28_RS14540	COG0457	Tetratricopeptide repeat
LUX28_RS14555	COG0473	3-isopropylmalate dehydrogenase activity
LUX28_RS14570	COG0440	acetolactate synthase activity
LUX28_RS14575	COG0028	Belongs to the TPP enzyme family
LUX28_RS14595	COG0732	type I restriction modification DNA specificity domain
LUX28_RS14605	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
LUX28_RS14625	COG0622	Phosphoesterase
LUX28_RS14630	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LUX28_RS14640	COG5401	PFAM Sporulation and spore germination
LUX28_RS14650	COG1846	Transcriptional regulator
LUX28_RS14655	COG2197	response regulator
LUX28_RS14660	COG0824	Thioesterase
LUX28_RS14665	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LUX28_RS14670	COG1053	succinate dehydrogenase
LUX28_RS14675	COG2009	succinate dehydrogenase
LUX28_RS14680	COG1719	4-vinyl reductase, 4VR
LUX28_RS14685	COG0527	aspartate kinase activity
LUX28_RS14695	COG3118	belongs to the thioredoxin family
LUX28_RS14700	COG3534	alpha-L-arabinofuranosidase
LUX28_RS14705	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
LUX28_RS14710	COG2086	electron transfer activity
LUX28_RS14715	COG1024	Enoyl-CoA hydratase
LUX28_RS14720	COG1309	transcriptional regulator
LUX28_RS14725	COG0318	PFAM AMP-dependent synthetase and ligase
LUX28_RS14735	COG3766	membrane
LUX28_RS14745	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LUX28_RS14745	COG1796	DNA polymerase
LUX28_RS14750	COG1286	toxin biosynthetic process
LUX28_RS14765	COG0072	phenylalanine-tRNA ligase activity
LUX28_RS14765	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LUX28_RS14770	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LUX28_RS14775	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LUX28_RS14785	COG3835	regulator
LUX28_RS14790	COG0277	FAD linked oxidase domain protein
LUX28_RS14795	COG0247	lactate metabolic process
LUX28_RS14800	COG1966	Carbon starvation protein
LUX28_RS14805	COG3534	alpha-L-arabinofuranosidase
LUX28_RS14810	COG0395	ABC-type sugar transport system, permease component
LUX28_RS14815	COG1175	transmembrane transport
LUX28_RS14820	COG1653	transport
LUX28_RS14830	COG0647	UMP catabolic process
LUX28_RS14835	COG0235	Class ii aldolase
LUX28_RS14840	COG1069	ribulokinase activity
LUX28_RS14845	COG2160	L-arabinose isomerase activity
LUX28_RS14850	COG3507	Belongs to the glycosyl hydrolase 43 family
LUX28_RS14855	COG1363	Peptidase, m42
LUX28_RS14865	COG3326	Membrane
LUX28_RS14870	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LUX28_RS14880	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LUX28_RS14885	COG1346	cytolysis
LUX28_RS14890	COG1380	Effector of murein hydrolase LrgA
LUX28_RS14895	COG3279	Response regulator of the LytR AlgR family
LUX28_RS14900	COG3275	phosphorelay sensor kinase activity
LUX28_RS14905	COG1011	Hydrolase
LUX28_RS14920	COG0398	Pfam SNARE associated Golgi protein
LUX28_RS14925	COG1484	DNA-dependent DNA replication
LUX28_RS14930	COG3611	Membrane attachment protein
LUX28_RS14945	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LUX28_RS14950	COG1733	regulation of RNA biosynthetic process
LUX28_RS14955	COG2814	Major facilitator Superfamily
LUX28_RS14960	COG0656	L-ascorbic acid biosynthetic process
LUX28_RS14965	COG0237	dephospho-CoA kinase activity
LUX28_RS14970	COG1971	Probably functions as a manganese efflux pump
LUX28_RS14975	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
LUX28_RS14980	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LUX28_RS14980	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LUX28_RS14985	COG5002	protein histidine kinase activity
LUX28_RS14990	COG0745	RESPONSE REGULATOR receiver
LUX28_RS15000	COG0538	isocitrate dehydrogenase activity
LUX28_RS15005	COG0372	Belongs to the citrate synthase family
LUX28_RS15020	COG0628	permease
LUX28_RS15025	COG3030	protein affecting phage T7 exclusion by the F plasmid
LUX28_RS15030	COG0469	pyruvate kinase activity
LUX28_RS15050	COG0281	malic enzyme
LUX28_RS15055	COG0587	DNA-directed DNA polymerase activity
LUX28_RS15075	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
LUX28_RS15085	COG4109	DRTGG domain
LUX28_RS15095	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS15110	COG0521	Mo-molybdopterin cofactor biosynthetic process
LUX28_RS15120	COG0827	DNA restriction-modification system
LUX28_RS15125	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LUX28_RS15130	COG3874	Sporulation protein YtfJ
LUX28_RS15140	COG1714	RDD family
LUX28_RS15145	COG0616	signal peptide processing
LUX28_RS15150	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LUX28_RS15155	COG1574	metal-dependent hydrolase with the TIM-barrel fold
LUX28_RS15160	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LUX28_RS15175	COG1104	cysteine desulfurase activity
LUX28_RS15180	COG1114	Component of the transport system for branched-chain amino acids
LUX28_RS15190	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LUX28_RS15195	COG1309	transcriptional regulator
LUX28_RS15200	COG1956	GAF domain-containing protein
LUX28_RS15205	COG2199	diguanylate cyclase activity
LUX28_RS15205	COG2203	Gaf domain
LUX28_RS15215	COG1012	belongs to the aldehyde dehydrogenase family
LUX28_RS15220	COG4282	regulation of fungal-type cell wall biogenesis
LUX28_RS15225	COG1017	nitric oxide dioxygenase activity
LUX28_RS15225	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LUX28_RS15235	COG0693	protein deglycase activity
LUX28_RS15250	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LUX28_RS15255	COG1378	Sugar-specific transcriptional regulator TrmB
LUX28_RS15275	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LUX28_RS15280	COG0454	-acetyltransferase
LUX28_RS15285	COG0517	IMP dehydrogenase activity
LUX28_RS15290	COG0123	including yeast histone deacetylase and acetoin utilization protein
LUX28_RS15295	COG1360	Flagellar Motor Protein
LUX28_RS15300	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LUX28_RS15305	COG1609	Transcriptional regulator
LUX28_RS15310	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
LUX28_RS15310	COG1605	Chorismate mutase
LUX28_RS15315	COG3118	belongs to the thioredoxin family
LUX28_RS15320	COG4980	gas vesicle protein
LUX28_RS15325	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
LUX28_RS15335	COG1674	ftsk spoiiie
LUX28_RS15340	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LUX28_RS15350	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LUX28_RS15360	COG1363	Peptidase, m42
LUX28_RS15365	COG5584	Small secreted protein
LUX28_RS15370	COG0281	malic enzyme
LUX28_RS15375	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LUX28_RS15390	COG0510	thiamine kinase activity
LUX28_RS15395	COG1597	lipid kinase activity
LUX28_RS15405	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
LUX28_RS15410	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LUX28_RS15415	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LUX28_RS15420	COG2252	PERMEase
LUX28_RS15425	COG4473	ABC transporter
LUX28_RS15430	COG1131	(ABC) transporter
LUX28_RS15435	COG1349	DNA-binding transcription factor activity
LUX28_RS15440	COG1187	pseudouridine synthase activity
LUX28_RS15445	COG2244	polysaccharide biosynthetic process
LUX28_RS15450	COG2081	HI0933 family
LUX28_RS15455	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LUX28_RS15465	COG1609	Transcriptional regulator
LUX28_RS15470	COG1653	transport
LUX28_RS15475	COG1175	transmembrane transport
LUX28_RS15480	COG0395	ABC-type sugar transport system, permease component
LUX28_RS15485	COG1486	melibiose metabolic process
LUX28_RS15495	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LUX28_RS15510	COG1366	Belongs to the anti-sigma-factor antagonist family
LUX28_RS15510	COG2202	Pas domain
LUX28_RS15515	COG2814	Major facilitator Superfamily
LUX28_RS15520	COG5522	Integral membrane protein (intg_mem_TP0381)
LUX28_RS15525	COG0577	efflux transmembrane transporter activity
LUX28_RS15530	COG1136	(ABC) transporter
LUX28_RS15535	COG2205	protein histidine kinase activity
LUX28_RS15540	COG0745	RESPONSE REGULATOR receiver
LUX28_RS15545	COG0577	efflux transmembrane transporter activity
LUX28_RS15550	COG1136	(ABC) transporter
LUX28_RS15570	COG1131	(ABC) transporter
LUX28_RS15575	COG1725	Transcriptional regulator
LUX28_RS15590	COG0640	Transcriptional regulator
LUX28_RS15595	COG0477	Major facilitator Superfamily
LUX28_RS15600	COG1242	4 iron, 4 sulfur cluster binding
LUX28_RS15605	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
LUX28_RS15615	COG0584	glycerophosphoryl diester phosphodiesterase
LUX28_RS15625	COG2267	carboxylic ester hydrolase activity
LUX28_RS15630	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LUX28_RS15635	COG1113	amino acid transport
LUX28_RS15640	COG0367	asparagine synthase
LUX28_RS15660	COG1506	peptidase
LUX28_RS15665	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LUX28_RS15670	COG1116	anion transmembrane transporter activity
LUX28_RS15675	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LUX28_RS15680	COG0494	nUDIX hydrolase
LUX28_RS15685	COG4824	toxin secretion phage lysis holin
LUX28_RS15690	COG0783	Belongs to the Dps family
LUX28_RS15715	COG0288	reversible hydration of carbon dioxide
LUX28_RS15725	COG1271	oxidase subunit
LUX28_RS15730	COG1294	oxidase, subunit
LUX28_RS15740	COG4948	Mandelate Racemase Muconate Lactonizing
LUX28_RS15750	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
LUX28_RS15755	COG0596	Alpha beta hydrolase
LUX28_RS15765	COG1169	isochorismate synthase
LUX28_RS15770	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LUX28_RS15775	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
LUX28_RS15910	COG3859	Proton-coupled thiamine transporter YuaJ
LUX28_RS15915	COG2268	Band 7 protein
LUX28_RS15920	COG1585	Membrane protein implicated in regulation of membrane protease activity
LUX28_RS15925	COG2318	DinB family
LUX28_RS15935	COG1454	alcohol dehydrogenase
LUX28_RS15940	COG1012	belongs to the aldehyde dehydrogenase family
LUX28_RS15945	COG1510	regulation of RNA biosynthetic process
LUX28_RS15955	COG0569	domain protein
LUX28_RS15960	COG1705	Flagellar rod assembly protein muramidase FlgJ
LUX28_RS15965	COG1017	nitric oxide dioxygenase activity
LUX28_RS15965	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LUX28_RS16020	COG2433	Pfam Transposase IS66
LUX28_RS16025	COG1196	nuclear chromosome segregation
LUX28_RS16025	COG0739	heme binding
LUX28_RS16025	COG0741	lytic transglycosylase activity
LUX28_RS16180	COG0582	viral genome integration into host DNA
LUX28_RS16195	COG0628	permease
LUX28_RS16200	COG0673	inositol 2-dehydrogenase activity
LUX28_RS16205	COG0693	protein deglycase activity
LUX28_RS16210	COG0840	transmembrane signaling receptor activity
LUX28_RS16215	COG0840	transmembrane signaling receptor activity
LUX28_RS16220	COG0840	transmembrane signaling receptor activity
LUX28_RS16225	COG0840	transmembrane signaling receptor activity
LUX28_RS16240	COG2070	2-Nitropropane dioxygenase
LUX28_RS16245	COG0432	Pfam Uncharacterised protein family UPF0047
LUX28_RS16250	COG0366	Alpha amylase catalytic
LUX28_RS16255	COG1253	flavin adenine dinucleotide binding
LUX28_RS16260	COG2738	Putative neutral zinc metallopeptidase
LUX28_RS16275	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LUX28_RS16300	COG1335	isochorismatase
LUX28_RS16305	COG1979	alcohol dehydrogenase
LUX28_RS16310	COG1979	alcohol dehydrogenase
LUX28_RS16315	COG2155	Conserved Protein
LUX28_RS16320	COG1098	S1 RNA binding domain
LUX28_RS16325	COG0436	Aminotransferase
LUX28_RS16330	COG1522	sequence-specific DNA binding
LUX28_RS16335	COG2267	carboxylic ester hydrolase activity
LUX28_RS16345	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
LUX28_RS16350	COG2205	protein histidine kinase activity
LUX28_RS16360	COG5018	Exonuclease
LUX28_RS16365	COG2814	Major facilitator Superfamily
LUX28_RS16370	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LUX28_RS16375	COG3011	Protein conserved in bacteria
LUX28_RS16385	COG3290	protein histidine kinase activity
LUX28_RS16390	COG4565	transcriptional regulatory protein
LUX28_RS16395	COG1744	ABC transporter substrate-binding protein PnrA-like
LUX28_RS16400	COG3845	ABC transporter
LUX28_RS16405	COG4603	Belongs to the binding-protein-dependent transport system permease family
LUX28_RS16410	COG1079	Belongs to the binding-protein-dependent transport system permease family
LUX28_RS16420	COG2111	Na H antiporter
LUX28_RS16420	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LUX28_RS16425	COG2111	Na H antiporter
LUX28_RS16430	COG1006	Multisubunit Na H antiporter MnhC subunit
LUX28_RS16435	COG0651	ATP synthesis coupled electron transport
LUX28_RS16440	COG1863	multisubunit Na H antiporter MnhE subunit
LUX28_RS16445	COG2212	antiporter activity
LUX28_RS16450	COG1320	monovalent cation:proton antiporter activity
LUX28_RS16455	COG2050	protein possibly involved in aromatic compounds catabolism
LUX28_RS16460	COG2197	response regulator
LUX28_RS16465	COG4585	Histidine kinase
LUX28_RS16475	COG0142	geranyltranstransferase activity
LUX28_RS16490	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
LUX28_RS16495	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LUX28_RS16500	COG1335	isochorismatase
LUX28_RS16505	COG5506	Protein of unknown function (DUF1694)
LUX28_RS16520	COG0628	permease
LUX28_RS16530	COG1418	mRNA catabolic process
LUX28_RS16535	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS16545	COG1511	domain protein
LUX28_RS16550	COG0433	COG0433 Predicted ATPase
LUX28_RS16550	COG1674	ftsk spoiiie
LUX28_RS16555	COG4499	WXG100 protein secretion system (Wss), protein YukC
LUX28_RS16560	COG5417	Belongs to the EsaB family
LUX28_RS16565	COG4842	Belongs to the WXG100 family
LUX28_RS16570	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
LUX28_RS16570	COG2508	Transcriptional regulator
LUX28_RS16575	COG0686	Belongs to the AlaDH PNT family
LUX28_RS16580	COG5634	Uncharacterized conserved protein (DUF2278)
LUX28_RS16585	COG3251	PFAM MbtH domain protein
LUX28_RS16590	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LUX28_RS16595	COG3433	isochorismatase activity
LUX28_RS16595	COG1535	isochorismatase
LUX28_RS16600	COG1021	2,3-dihydroxybenzoate-AMP ligase
LUX28_RS16605	COG1169	isochorismate synthase
LUX28_RS16610	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS16615	COG2819	hydrolase of the alpha beta superfamily
LUX28_RS16620	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
LUX28_RS16625	COG1268	BioY protein
LUX28_RS16630	COG2056	Na+-H+ antiporter family
LUX28_RS16640	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
LUX28_RS16645	COG3584	3D domain protein
LUX28_RS16660	COG1252	NADH dehydrogenase
LUX28_RS16690	COG1131	(ABC) transporter
LUX28_RS16710	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LUX28_RS16715	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
LUX28_RS16720	COG0316	Belongs to the HesB IscA family
LUX28_RS16730	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LUX28_RS16740	COG1252	NADH dehydrogenase
LUX28_RS16745	COG4837	Protein of unknown function (DUF1462)
LUX28_RS16750	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
LUX28_RS16755	COG4946	Tricorn protease homolog
LUX28_RS16755	COG1506	peptidase
LUX28_RS16755	COG0823	Involved in the tonB-independent uptake of proteins
LUX28_RS16765	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
LUX28_RS16770	COG0460	homoserine dehydrogenase
LUX28_RS16775	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LUX28_RS16780	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LUX28_RS16785	COG0647	UMP catabolic process
LUX28_RS16790	COG2445	Protein of unknown function DUF86
LUX28_RS16795	COG4470	Protein conserved in bacteria
LUX28_RS16805	COG0739	heme binding
LUX28_RS16815	COG0737	Belongs to the 5'-nucleotidase family
LUX28_RS16820	COG0730	response to heat
LUX28_RS16825	COG1801	Protein of unknown function DUF72
LUX28_RS16840	COG2508	Transcriptional regulator
LUX28_RS16875	COG2814	Major facilitator Superfamily
LUX28_RS16880	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
LUX28_RS16885	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LUX28_RS16890	COG2356	endonuclease I
LUX28_RS16895	COG3842	ATPase activity
LUX28_RS16900	COG2188	Transcriptional regulator
LUX28_RS16905	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LUX28_RS16910	COG0395	ABC-type sugar transport system, permease component
LUX28_RS16915	COG1175	transmembrane transport
LUX28_RS16920	COG1653	transport
LUX28_RS16925	COG2222	sugar isomerase
LUX28_RS16930	COG0789	Transcriptional regulator
LUX28_RS16945	COG0322	excinuclease ABC activity
LUX28_RS16950	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LUX28_RS16955	COG2226	methyltransferase
LUX28_RS16965	COG3409	Peptidoglycan-binding domain 1 protein
LUX28_RS16970	COG0719	Fe-S assembly protein
LUX28_RS16975	COG0822	iron-sulfur transferase activity
LUX28_RS16980	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LUX28_RS16985	COG0719	Fe-S assembly protein
LUX28_RS16990	COG0396	ATPase activity
LUX28_RS17000	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LUX28_RS17005	COG1464	Belongs to the NlpA lipoprotein family
LUX28_RS17010	COG2011	ABC-type metal ion transport system permease component
LUX28_RS17015	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LUX28_RS17025	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LUX28_RS17030	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LUX28_RS17045	COG1393	Belongs to the ArsC family
LUX28_RS17050	COG1960	acyl-CoA dehydrogenase activity
LUX28_RS17055	COG0183	Belongs to the thiolase family
LUX28_RS17060	COG1024	Enoyl-CoA hydratase
LUX28_RS17060	COG1250	3-hydroxyacyl-CoA dehydrogenase
LUX28_RS17075	COG0477	Major facilitator Superfamily
LUX28_RS17085	COG5577	PFAM Coat F domain
LUX28_RS17090	COG1846	Transcriptional regulator
LUX28_RS17095	COG0477	Major facilitator Superfamily
LUX28_RS17100	COG1942	4-Oxalocrotonate Tautomerase
LUX28_RS17105	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS17110	COG0583	DNA-binding transcription factor activity
LUX28_RS17120	COG0583	DNA-binding transcription factor activity
LUX28_RS17140	COG1120	ATPase activity
LUX28_RS17155	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS17160	COG0783	Belongs to the Dps family
LUX28_RS17165	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LUX28_RS17170	COG0745	RESPONSE REGULATOR receiver
LUX28_RS17175	COG2770	Histidine kinase
LUX28_RS17175	COG2205	protein histidine kinase activity
LUX28_RS17185	COG1309	transcriptional regulator
LUX28_RS17190	COG0114	fumarate hydratase activity
LUX28_RS17200	COG0697	spore germination
LUX28_RS17205	COG0814	amino acid
LUX28_RS17215	COG2197	response regulator
LUX28_RS17220	COG4585	Histidine kinase
LUX28_RS17225	COG4758	membrane
LUX28_RS17230	COG3595	metallopeptidase activity
LUX28_RS17235	COG1842	Phage shock protein A
LUX28_RS17240	COG4758	membrane
LUX28_RS17245	COG2814	Major facilitator Superfamily
LUX28_RS17250	COG2096	Adenosyltransferase
LUX28_RS17255	COG1120	ATPase activity
LUX28_RS17260	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LUX28_RS17265	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LUX28_RS17270	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS17275	COG3386	PFAM SMP-30 Gluconolaconase
LUX28_RS17280	COG2205	protein histidine kinase activity
LUX28_RS17285	COG0745	RESPONSE REGULATOR receiver
LUX28_RS17295	COG1191	sigma factor activity
LUX28_RS17305	COG2140	Oxalate decarboxylase
LUX28_RS17315	COG1120	ATPase activity
LUX28_RS17320	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LUX28_RS17325	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LUX28_RS17330	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LUX28_RS17335	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
LUX28_RS17340	COG0531	amino acid
LUX28_RS17350	COG1988	membrane-bound metal-dependent
LUX28_RS17355	COG1368	sulfuric ester hydrolase activity
LUX28_RS17360	COG1910	domain protein
LUX28_RS17365	COG0725	ABC transporter, periplasmic molybdate-binding protein
LUX28_RS17370	COG4149	molybdate abc transporter
LUX28_RS17375	COG2197	response regulator
LUX28_RS17380	COG3850	Histidine kinase
LUX28_RS17385	COG1131	(ABC) transporter
LUX28_RS17395	COG0842	Transport permease protein
LUX28_RS17400	COG0656	L-ascorbic acid biosynthetic process
LUX28_RS17420	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LUX28_RS17425	COG3973	AAA domain
LUX28_RS17430	COG2860	membrane
LUX28_RS17440	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
LUX28_RS17445	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LUX28_RS17450	COG2217	Heavy metal translocating P-type atpase
LUX28_RS17455	COG2217	Heavy metal translocating P-type atpase
LUX28_RS17460	COG2608	mercury ion transmembrane transporter activity
LUX28_RS17465	COG1937	Protein conserved in bacteria
LUX28_RS17470	COG0673	inositol 2-dehydrogenase activity
LUX28_RS17485	COG2814	Major facilitator Superfamily
LUX28_RS17500	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LUX28_RS17505	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LUX28_RS17510	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LUX28_RS17515	COG1126	abc transporter atp-binding protein
LUX28_RS17520	COG0765	amino acid transport
LUX28_RS17525	COG0765	amino acid transport
LUX28_RS17530	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LUX28_RS17535	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LUX28_RS17540	COG0454	-acetyltransferase
LUX28_RS17545	COG0583	DNA-binding transcription factor activity
LUX28_RS17550	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS17555	COG2732	(Barnase) inhibitor
LUX28_RS17570	COG0557	exoribonuclease II activity
LUX28_RS17575	COG1647	Serine aminopeptidase, S33
LUX28_RS17580	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LUX28_RS17585	COG1476	TRANSCRIPTIONal
LUX28_RS17590	COG1396	sequence-specific DNA binding
LUX28_RS17595	COG1396	sequence-specific DNA binding
LUX28_RS17600	COG1733	regulation of RNA biosynthetic process
LUX28_RS17625	COG1131	(ABC) transporter
LUX28_RS17665	COG1174	glycine betaine transport
LUX28_RS17670	COG1732	Glycine betaine
LUX28_RS17675	COG1174	glycine betaine transport
LUX28_RS17680	COG0517	IMP dehydrogenase activity
LUX28_RS17680	COG1125	glycine betaine transport
LUX28_RS17685	COG1510	regulation of RNA biosynthetic process
LUX28_RS17690	COG1174	glycine betaine transport
LUX28_RS17695	COG1732	Glycine betaine
LUX28_RS17700	COG1174	glycine betaine transport
LUX28_RS17705	COG1125	glycine betaine transport
LUX28_RS17705	COG0517	IMP dehydrogenase activity
LUX28_RS17710	COG1510	regulation of RNA biosynthetic process
LUX28_RS17715	COG2095	MarC family integral membrane protein
LUX28_RS17720	COG3064	Membrane
LUX28_RS17725	COG4640	response to antibiotic
LUX28_RS17730	COG0456	acetyltransferase
LUX28_RS17745	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
LUX28_RS17760	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LUX28_RS17765	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LUX28_RS17770	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LUX28_RS17780	COG2234	aminopeptidase activity
LUX28_RS17800	COG0126	phosphoglycerate kinase activity
LUX28_RS17805	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LUX28_RS17810	COG2390	Transcriptional regulator
LUX28_RS17815	COG2814	Major facilitator Superfamily
LUX28_RS17820	COG1609	Transcriptional regulator
LUX28_RS17830	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LUX28_RS17835	COG0583	DNA-binding transcription factor activity
LUX28_RS17840	COG0697	spore germination
LUX28_RS17845	COG1113	amino acid transport
LUX28_RS17855	COG1609	Transcriptional regulator
LUX28_RS17865	COG0561	phosphatase activity
LUX28_RS17870	COG1737	Transcriptional regulator
LUX28_RS17875	COG1070	Carbohydrate kinase
LUX28_RS17900	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LUX28_RS17905	COG2186	Transcriptional regulator
LUX28_RS17910	COG1620	l-lactate permease
LUX28_RS17915	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
LUX28_RS17925	COG5039	Polysaccharide pyruvyl transferase
LUX28_RS17930	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LUX28_RS17935	COG0110	maltose O-acetyltransferase activity
LUX28_RS17940	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LUX28_RS17945	COG2244	polysaccharide biosynthetic process
LUX28_RS17950	COG1216	Glycosyl transferase, family 2
LUX28_RS17955	COG5039	Polysaccharide pyruvyl transferase
LUX28_RS17960	COG1216	Glycosyl transferase, family 2
LUX28_RS17970	COG0438	transferase activity, transferring glycosyl groups
LUX28_RS17975	COG1215	transferase activity, transferring glycosyl groups
LUX28_RS17980	COG0438	transferase activity, transferring glycosyl groups
LUX28_RS17985	COG1086	Polysaccharide biosynthesis protein
LUX28_RS17990	COG0489	protein tyrosine kinase activity
LUX28_RS17995	COG3944	biosynthesis protein
LUX28_RS18000	COG1396	sequence-specific DNA binding
LUX28_RS18005	COG2272	Belongs to the type-B carboxylesterase lipase family
LUX28_RS18010	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LUX28_RS18015	COG2364	Membrane
LUX28_RS18020	COG0456	acetyltransferase
LUX28_RS18025	COG3479	Phenolic acid decarboxylase
LUX28_RS18065	COG2223	nitrite transmembrane transporter activity
LUX28_RS18070	COG1609	Transcriptional regulator
LUX28_RS18080	COG0583	DNA-binding transcription factor activity
LUX28_RS18085	COG2828	Protein conserved in bacteria
LUX28_RS18090	COG0477	Major facilitator Superfamily
LUX28_RS18090	COG2814	Major facilitator Superfamily
LUX28_RS18095	COG1611	Belongs to the LOG family
LUX28_RS18100	COG1694	Mazg nucleotide pyrophosphohydrolase
LUX28_RS18105	COG0659	secondary active sulfate transmembrane transporter activity
LUX28_RS18110	COG0288	reversible hydration of carbon dioxide
LUX28_RS18115	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LUX28_RS18120	COG4290	ribonuclease
LUX28_RS18125	COG2162	N-hydroxyarylamine O-acetyltransferase activity
LUX28_RS18130	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LUX28_RS18140	COG0391	Required for morphogenesis under gluconeogenic growth conditions
LUX28_RS18150	COG1051	belongs to the nudix hydrolase family
LUX28_RS18155	COG0492	ferredoxin-NADP+ reductase activity
LUX28_RS18160	COG0791	NLP P60 protein
LUX28_RS18160	COG3883	PFAM NLP P60 protein
LUX28_RS18165	COG0457	Tetratricopeptide repeat
LUX28_RS18170	COG5002	protein histidine kinase activity
LUX28_RS18175	COG0745	RESPONSE REGULATOR receiver
LUX28_RS18185	COG1132	(ABC) transporter
LUX28_RS18190	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LUX28_RS18190	COG0140	phosphoribosyl-ATP diphosphatase activity
LUX28_RS18215	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LUX28_RS18230	COG4990	cell redox homeostasis
LUX28_RS18235	COG0110	maltose O-acetyltransferase activity
LUX28_RS18255	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LUX28_RS18265	COG2188	Transcriptional regulator
LUX28_RS18270	COG1309	transcriptional regulator
LUX28_RS18275	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
LUX28_RS18280	COG1950	PFAM Membrane protein of
LUX28_RS18285	COG1983	PspC domain protein
LUX28_RS18290	COG3595	metallopeptidase activity
LUX28_RS18305	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LUX28_RS18315	COG4897	Protein conserved in bacteria
LUX28_RS18320	COG3848	Pyruvate phosphate dikinase
LUX28_RS18320	COG0574	Belongs to the PEP-utilizing enzyme family
LUX28_RS18325	COG1309	transcriptional regulator
LUX28_RS18330	COG2814	Major facilitator Superfamily
LUX28_RS18370	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LUX28_RS18380	COG0793	Belongs to the peptidase S41A family
LUX28_RS18380	COG3409	Peptidoglycan-binding domain 1 protein
LUX28_RS18385	COG3420	alginic acid biosynthetic process
LUX28_RS18390	COG2177	Part of the ABC transporter FtsEX involved in
LUX28_RS18395	COG2884	Cell division ATP-binding protein ftsE
LUX28_RS18400	COG2010	Cytochrome c
LUX28_RS18405	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LUX28_RS18420	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LUX28_RS18435	COG1516	flagellar protein fliS
LUX28_RS18440	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
LUX28_RS18445	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LUX28_RS18465	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LUX28_RS18470	COG1256	bacterial-type flagellum assembly
LUX28_RS18470	COG4786	Flagellar basal body rod
LUX28_RS18475	COG3418	PFAM FlgN family protein
LUX28_RS18480	COG2747	anti-sigma28 factor FlgM
LUX28_RS18490	COG1040	competence protein
LUX28_RS18500	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
LUX28_RS18505	COG1307	EDD domain protein, DegV family
LUX28_RS18510	COG2197	response regulator
LUX28_RS18515	COG4585	Histidine kinase
LUX28_RS18520	COG1739	Uncharacterized protein family UPF0029
LUX28_RS18525	COG1316	TRANSCRIPTIONal
LUX28_RS18530	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LUX28_RS18535	COG0438	transferase activity, transferring glycosyl groups
LUX28_RS18540	COG1215	transferase activity, transferring glycosyl groups
LUX28_RS18545	COG3206	protein involved in exopolysaccharide biosynthesis
LUX28_RS18550	COG3307	-O-antigen
LUX28_RS18555	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
LUX28_RS18560	COG0438	transferase activity, transferring glycosyl groups
LUX28_RS18560	COG0297	glycogen (starch) synthase activity
LUX28_RS18565	COG2244	polysaccharide biosynthetic process
LUX28_RS18575	COG2247	cell wall binding repeat
LUX28_RS18575	COG0860	N-Acetylmuramoyl-L-alanine amidase
LUX28_RS18580	COG2385	sporulation resulting in formation of a cellular spore
LUX28_RS18580	COG2247	cell wall binding repeat
LUX28_RS18590	COG1316	TRANSCRIPTIONal
LUX28_RS18595	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LUX28_RS18600	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LUX28_RS18605	COG1134	teichoic acid transport
LUX28_RS18610	COG1682	transport, permease protein
LUX28_RS18615	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
LUX28_RS18625	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
LUX28_RS18630	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
LUX28_RS18635	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
LUX28_RS18640	COG4193	domain, Protein
LUX28_RS18645	COG1482	cell wall glycoprotein biosynthetic process
LUX28_RS18650	COG0697	spore germination
LUX28_RS18655	COG0814	amino acid
LUX28_RS18665	COG1215	transferase activity, transferring glycosyl groups
LUX28_RS18670	COG2814	Major facilitator Superfamily
LUX28_RS18675	COG1316	TRANSCRIPTIONal
LUX28_RS18680	COG0561	phosphatase activity
LUX28_RS18685	COG2433	Pfam Transposase IS66
LUX28_RS18690	COG0791	NLP P60 protein
LUX28_RS18700	COG2843	Capsule synthesis protein
LUX28_RS18710	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LUX28_RS18715	COG0697	spore germination
LUX28_RS18720	COG0814	amino acid
LUX28_RS18730	COG1609	Transcriptional regulator
LUX28_RS18735	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LUX28_RS18745	COG1129	ABC transporter
LUX28_RS18750	COG1172	Belongs to the binding-protein-dependent transport system permease family
LUX28_RS18755	COG1879	ABC-type sugar transport system periplasmic component
LUX28_RS18760	COG3103	Sh3 type 3 domain protein
LUX28_RS18765	COG2249	NAD(P)H dehydrogenase (quinone) activity
LUX28_RS18770	COG3527	Alpha-acetolactate decarboxylase
LUX28_RS18775	COG0028	Belongs to the TPP enzyme family
LUX28_RS18780	COG0583	DNA-binding transcription factor activity
LUX28_RS18785	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LUX28_RS18800	COG5337	Spore coat protein CotH
LUX28_RS18810	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LUX28_RS18820	COG0405	Gamma-glutamyltransferase
LUX28_RS18825	COG1522	sequence-specific DNA binding
LUX28_RS18830	COG2059	Chromate
LUX28_RS18835	COG2059	Chromate
LUX28_RS18880	COG5444	nuclease activity
LUX28_RS18895	COG3878	Protein conserved in bacteria
LUX28_RS18900	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
LUX28_RS18905	COG4464	protein tyrosine phosphatase activity
LUX28_RS18910	COG0489	protein tyrosine kinase activity
LUX28_RS18915	COG3944	biosynthesis protein
LUX28_RS18925	COG4715	Zinc finger, swim domain protein
LUX28_RS18930	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LUX28_RS18935	COG0561	phosphatase activity
LUX28_RS18940	COG1349	DNA-binding transcription factor activity
LUX28_RS18945	COG0629	single-stranded DNA binding
LUX28_RS18970	COG0457	Tetratricopeptide repeat
LUX28_RS18975	COG4786	Flagellar basal body rod
LUX28_RS18980	COG4786	Flagellar basal body rod
LUX28_RS18985	COG1077	Cell shape determining protein MreB Mrl
LUX28_RS18990	COG1609	Transcriptional regulator
LUX28_RS18995	COG1846	Transcriptional regulator
LUX28_RS19000	COG2814	Major facilitator Superfamily
LUX28_RS19005	COG1953	Uracil, thiamine, allantoin
LUX28_RS19010	COG0477	Major facilitator Superfamily
LUX28_RS19015	COG1335	isochorismatase
LUX28_RS19020	COG0004	ammonium transporteR
LUX28_RS19025	COG0347	Belongs to the P(II) protein family
LUX28_RS19030	COG0772	Belongs to the SEDS family
LUX28_RS19035	COG0671	phosphoesterase, PA-phosphatase related
LUX28_RS19045	COG0739	heme binding
LUX28_RS19050	COG1247	-acetyltransferase
LUX28_RS19065	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LUX28_RS19075	COG0726	polysaccharide deacetylase
LUX28_RS19085	COG1959	2 iron, 2 sulfur cluster binding
LUX28_RS19100	COG0831	urea catabolic process
LUX28_RS19105	COG3237	CsbD-like
LUX28_RS19110	COG1994	Peptidase M50
LUX28_RS19115	COG0457	Tetratricopeptide repeat
LUX28_RS19125	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LUX28_RS19135	COG2304	oxidoreductase activity
LUX28_RS19140	COG2304	oxidoreductase activity
LUX28_RS19145	COG2385	sporulation resulting in formation of a cellular spore
LUX28_RS19150	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LUX28_RS19160	COG4836	Membrane
LUX28_RS19230	COG0698	ribose 5-phosphate isomerase
LUX28_RS19235	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LUX28_RS19245	COG0009	L-threonylcarbamoyladenylate synthase
LUX28_RS19250	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
LUX28_RS19270	COG2890	protein-(glutamine-N5) methyltransferase activity
LUX28_RS19275	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LUX28_RS19280	COG0346	lactoylglutathione lyase activity
LUX28_RS19285	COG0789	Transcriptional regulator
LUX28_RS19290	COG0679	Auxin Efflux Carrier
LUX28_RS19295	COG0281	malic enzyme
LUX28_RS19310	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LUX28_RS19320	COG1494	fructose-1,6-bisphosphatase
LUX28_RS19325	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LUX28_RS19335	COG0191	fructose-bisphosphate aldolase activity
LUX28_RS19340	COG2204	response regulator
LUX28_RS19345	COG4821	SIS domain
LUX28_RS19360	COG2181	nitrate reductase activity
LUX28_RS19360	COG0247	lactate metabolic process
LUX28_RS19365	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LUX28_RS19380	COG1132	(ABC) transporter
LUX28_RS19385	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LUX28_RS19395	COG2181	nitrate reductase activity
LUX28_RS19400	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
LUX28_RS19405	COG1140	nitrate reductase beta subunit
LUX28_RS19415	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LUX28_RS19425	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LUX28_RS19430	COG2223	nitrite transmembrane transporter activity
LUX28_RS19440	COG4506	Protein conserved in bacteria
LUX28_RS19445	COG0457	Tetratricopeptide repeat
LUX28_RS19485	COG0010	Belongs to the arginase family
LUX28_RS19490	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
LUX28_RS19495	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LUX28_RS19510	COG1994	Peptidase M50
LUX28_RS19515	COG1942	4-Oxalocrotonate Tautomerase
LUX28_RS19520	COG1846	Transcriptional regulator
LUX28_RS19525	COG0531	amino acid
LUX28_RS19530	COG3465	dGTPase activity
LUX28_RS19535	COG1078	dGTPase activity
LUX28_RS19550	COG1695	Transcriptional regulator
LUX28_RS19560	COG1131	(ABC) transporter
LUX28_RS19565	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
LUX28_RS19595	COG0583	DNA-binding transcription factor activity
LUX28_RS19600	COG2855	membrane
LUX28_RS19605	COG0280	phosphate acetyltransferase
LUX28_RS19615	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS19620	COG0436	Aminotransferase
LUX28_RS19650	COG2814	Major facilitator Superfamily
LUX28_RS19655	COG2814	Major facilitator Superfamily
LUX28_RS19660	COG0833	amino acid
LUX28_RS19665	COG4187	Peptidase family M20/M25/M40
LUX28_RS19670	COG1012	belongs to the aldehyde dehydrogenase family
LUX28_RS19675	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LUX28_RS19685	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
LUX28_RS19690	COG1091	dTDP-4-dehydrorhamnose reductase activity
LUX28_RS19695	COG1088	dTDP-glucose 4,6-dehydratase activity
LUX28_RS19700	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LUX28_RS19705	COG3980	spore coat polysaccharide biosynthesis protein
LUX28_RS19710	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
LUX28_RS19715	COG2089	acid synthase
LUX28_RS19720	COG0456	acetyltransferase
LUX28_RS19725	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LUX28_RS19730	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
LUX28_RS19735	COG0463	Glycosyl transferase, family 2
LUX28_RS19745	COG2363	Small membrane protein
LUX28_RS19750	COG2233	PERMEase
LUX28_RS19765	COG1216	Glycosyl transferase, family 2
LUX28_RS19770	COG0351	phosphomethylpyrimidine kinase
LUX28_RS19780	COG1621	beta-fructofuranosidase activity
LUX28_RS19785	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LUX28_RS19785	COG1263	PTS System
LUX28_RS19790	COG3711	transcriptional antiterminator
LUX28_RS19800	COG1404	Belongs to the peptidase S8 family
LUX28_RS19805	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LUX28_RS19810	COG0778	Nitroreductase
LUX28_RS19815	COG0772	Belongs to the SEDS family
LUX28_RS19820	COG0454	-acetyltransferase
LUX28_RS19840	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LUX28_RS19845	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LUX28_RS19850	COG2261	transglycosylase associated protein
LUX28_RS19855	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
LUX28_RS19860	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LUX28_RS19865	COG2246	polysaccharide biosynthetic process
LUX28_RS19870	COG1309	transcriptional regulator
LUX28_RS19890	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LUX28_RS19895	COG2837	iron assimilation
LUX28_RS19915	COG0583	DNA-binding transcription factor activity
LUX28_RS19925	COG1346	cytolysis
LUX28_RS19930	COG4895	conserved protein (DUF2196)
LUX28_RS19935	COG0789	Transcriptional regulator
LUX28_RS19940	COG5504	Zn-dependent protease
LUX28_RS19945	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LUX28_RS19950	COG0346	lactoylglutathione lyase activity
LUX28_RS19955	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LUX28_RS19960	COG1404	Belongs to the peptidase S8 family
LUX28_RS19965	COG1442	glycosyl transferase family 8
LUX28_RS19975	COG1575	Belongs to the MenA family. Type 1 subfamily
LUX28_RS19990	COG1696	Membrane protein involved in D-alanine export
LUX28_RS20000	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LUX28_RS20005	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LUX28_RS20010	COG1486	melibiose metabolic process
LUX28_RS20015	COG1447	Phosphotransferase system cellobiose-specific component IIA
LUX28_RS20020	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LUX28_RS20025	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LUX28_RS20030	COG3711	transcriptional antiterminator
LUX28_RS20030	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LUX28_RS20040	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LUX28_RS20045	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LUX28_RS20055	COG0640	Transcriptional regulator
LUX28_RS20060	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LUX28_RS20065	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LUX28_RS20070	COG1447	Phosphotransferase system cellobiose-specific component IIA
LUX28_RS20075	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LUX28_RS20080	COG2723	6-phospho-beta-galactosidase activity
LUX28_RS20085	COG1940	carbohydrate kinase activity
LUX28_RS20090	COG1482	cell wall glycoprotein biosynthetic process
LUX28_RS20100	COG0753	catalase activity
LUX28_RS20105	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
LUX28_RS20110	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
LUX28_RS20115	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
LUX28_RS20120	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LUX28_RS20125	COG4988	ABC transporter
LUX28_RS20130	COG1294	oxidase, subunit
LUX28_RS20135	COG1271	oxidase subunit
LUX28_RS20140	COG3493	citrate carrier protein
LUX28_RS20145	COG0726	polysaccharide deacetylase
LUX28_RS20150	COG3842	ATPase activity
LUX28_RS20155	COG2508	Transcriptional regulator
LUX28_RS20160	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LUX28_RS20170	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LUX28_RS20185	COG4894	glucomannan catabolic process
LUX28_RS20190	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LUX28_RS20195	COG0500	methyltransferase
LUX28_RS20200	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LUX28_RS20220	COG0753	catalase activity
LUX28_RS20220	COG0693	protein deglycase activity
LUX28_RS20225	COG2851	Citrate transporter
LUX28_RS20230	COG2273	Hydrolase Family 16
LUX28_RS20235	COG3711	transcriptional antiterminator
LUX28_RS20240	COG2270	Major facilitator Superfamily
LUX28_RS20245	COG0513	Belongs to the DEAD box helicase family
LUX28_RS20340	COG3209	COG3209 Rhs family protein
LUX28_RS20350	COG0697	spore germination
LUX28_RS20355	COG0589	response to stress
LUX28_RS20365	COG0494	nUDIX hydrolase
LUX28_RS20370	COG3507	Belongs to the glycosyl hydrolase 43 family
LUX28_RS20395	COG0010	Belongs to the arginase family
LUX28_RS20400	COG0833	amino acid
LUX28_RS20405	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
LUX28_RS20410	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LUX28_RS20420	COG2390	Transcriptional regulator
LUX28_RS20425	COG0561	phosphatase activity
LUX28_RS20455	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LUX28_RS20460	COG5294	Protein conserved in bacteria
LUX28_RS20465	COG0577	efflux transmembrane transporter activity
LUX28_RS20470	COG1136	(ABC) transporter
LUX28_RS20475	COG2205	protein histidine kinase activity
LUX28_RS20480	COG0745	RESPONSE REGULATOR receiver
LUX28_RS20485	COG2205	protein histidine kinase activity
LUX28_RS20490	COG0745	RESPONSE REGULATOR receiver
LUX28_RS20520	COG1082	Xylose isomerase domain protein TIM barrel
LUX28_RS20530	COG2814	Major facilitator Superfamily
LUX28_RS20560	COG1349	DNA-binding transcription factor activity
LUX28_RS20565	COG0667	Aldo Keto reductase
LUX28_RS20570	COG2814	Major facilitator Superfamily
LUX28_RS20585	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS20590	COG2197	response regulator
LUX28_RS20595	COG4585	Histidine kinase
LUX28_RS20600	COG3239	Fatty acid desaturase
LUX28_RS20605	COG1309	transcriptional regulator
LUX28_RS20610	COG1012	belongs to the aldehyde dehydrogenase family
LUX28_RS20615	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LUX28_RS20625	COG0640	Transcriptional regulator
LUX28_RS20630	COG2814	Major facilitator Superfamily
LUX28_RS20635	COG1714	RDD family
LUX28_RS20645	COG0450	alkyl hydroperoxide reductase
LUX28_RS20650	COG3634	alkyl hydroperoxide reductase activity
LUX28_RS20655	COG3177	Filamentation induced by cAMP protein fic
LUX28_RS20660	COG1113	amino acid transport
LUX28_RS20670	COG2080	2 iron, 2 sulfur cluster binding
LUX28_RS20685	COG2068	MobA-Related Protein
LUX28_RS20690	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
LUX28_RS20740	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
LUX28_RS20745	COG0667	Aldo Keto reductase
LUX28_RS20750	COG0456	acetyltransferase
LUX28_RS20755	COG0457	Tetratricopeptide repeat
LUX28_RS20760	COG0010	Belongs to the arginase family
LUX28_RS20765	COG0833	amino acid
LUX28_RS20770	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LUX28_RS20775	COG5658	integral membrane protein
LUX28_RS20780	COG0640	Transcriptional regulator
LUX28_RS20785	COG3829	transcription factor binding
LUX28_RS20795	COG0488	(ABC) transporter
LUX28_RS20810	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LUX28_RS20815	COG5002	protein histidine kinase activity
LUX28_RS20815	COG3850	Histidine kinase
LUX28_RS20820	COG0745	RESPONSE REGULATOR receiver
LUX28_RS20825	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LUX28_RS20830	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LUX28_RS20835	COG4853	Protein conserved in bacteria
LUX28_RS20840	COG4863	YycH protein
LUX28_RS20845	COG5002	protein histidine kinase activity
LUX28_RS20850	COG0745	RESPONSE REGULATOR receiver
LUX28_RS20880	COG0346	lactoylglutathione lyase activity
LUX28_RS20885	COG0305	Participates in initiation and elongation during chromosome replication
LUX28_RS20900	COG3093	addiction module antidote protein HigA
LUX28_RS20905	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LUX28_RS20910	COG0297	glycogen (starch) synthase activity
LUX28_RS20920	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
LUX28_RS20925	COG0438	transferase activity, transferring glycosyl groups
LUX28_RS20935	COG2112	serine threonine protein kinase
LUX28_RS20945	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
LUX28_RS20950	COG4241	membrane
LUX28_RS20960	COG5577	PFAM Coat F domain
LUX28_RS20965	COG1733	regulation of RNA biosynthetic process
LUX28_RS20975	COG0697	spore germination
LUX28_RS20980	COG1621	beta-fructofuranosidase activity
LUX28_RS20985	COG1621	beta-fructofuranosidase activity
LUX28_RS20990	COG1802	Transcriptional regulator
LUX28_RS20995	COG2318	DinB family
LUX28_RS21000	COG2211	Major facilitator Superfamily
LUX28_RS21005	COG0697	spore germination
LUX28_RS21015	COG0778	Nitroreductase
LUX28_RS21020	COG1846	Transcriptional regulator
LUX28_RS21025	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LUX28_RS21030	COG1846	Transcriptional regulator
LUX28_RS21035	COG2153	protein acetylation
LUX28_RS21045	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LUX28_RS21050	COG0583	DNA-binding transcription factor activity
LUX28_RS21055	COG1028	Short-chain dehydrogenase reductase Sdr
LUX28_RS21060	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LUX28_RS21065	COG0697	spore germination
LUX28_RS21070	COG1331	Highly conserved protein containing a thioredoxin domain
LUX28_RS21075	COG1266	CAAX protease self-immunity
LUX28_RS21080	COG2814	Major facilitator Superfamily
LUX28_RS21080	COG0477	Major facilitator Superfamily
LUX28_RS21085	COG0346	lactoylglutathione lyase activity
LUX28_RS21090	COG1609	Transcriptional regulator
LUX28_RS21095	COG0708	Exodeoxyribonuclease III
LUX28_RS21100	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LUX28_RS21105	COG2169	Transcriptional regulator
LUX28_RS21115	COG0629	single-stranded DNA binding
LUX28_RS21125	COG0012	GTP binding
LUX28_RS21130	COG0243	molybdopterin cofactor binding
LUX28_RS21135	COG4481	Protein conserved in bacteria
LUX28_RS21140	COG3949	Membrane
LUX28_RS21155	COG1475	DNA binding
LUX28_RS21160	COG1192	Involved in chromosome partitioning
LUX28_RS21185	COG1847	R3H domain protein
LUX28_RS21190	COG0706	membrane insertase activity
LUX28_RS21275	COG2822	iron ion transport