locus-tag	class	description
JOF24_RS00010	COG0592	DNA-directed DNA polymerase activity
JOF24_RS00015	COG2501	S4 domain
JOF24_RS00030	COG0187	DNA topoisomerase II activity
JOF24_RS00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JOF24_RS00070	COG0517	IMP dehydrogenase activity
JOF24_RS00070	COG0516	GMP reductase activity
JOF24_RS00075	COG1686	Belongs to the peptidase S11 family
JOF24_RS00095	COG1929	Belongs to the glycerate kinase type-1 family
JOF24_RS00105	COG1428	Deoxynucleoside kinase
JOF24_RS00110	COG1428	Deoxynucleoside kinase
JOF24_RS00115	COG1388	LysM domain
JOF24_RS00115	COG3858	chitin binding
JOF24_RS00120	COG1335	isochorismatase
JOF24_RS00125	COG0590	tRNA wobble adenosine to inosine editing
JOF24_RS00135	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JOF24_RS00140	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JOF24_RS00145	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JOF24_RS00190	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
JOF24_RS00195	COG3853	Toxic anion resistance protein (TelA)
JOF24_RS00200	COG1982	Orn Lys Arg decarboxylase major
JOF24_RS00210	COG3870	Protein conserved in bacteria
JOF24_RS00215	COG1728	Protein conserved in bacteria
JOF24_RS00220	COG0470	DNA polymerase III
JOF24_RS00225	COG1774	PSP1 C-terminal conserved region
JOF24_RS00235	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
JOF24_RS00245	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JOF24_RS00250	COG2002	toxin-antitoxin pair type II binding
JOF24_RS00255	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JOF24_RS00255	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JOF24_RS00260	COG0084	hydrolase, TatD family'
JOF24_RS00265	COG3584	3D domain protein
JOF24_RS00265	COG3583	domain protein
JOF24_RS00270	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JOF24_RS00275	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
JOF24_RS00285	COG4466	Protein conserved in bacteria
JOF24_RS00300	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JOF24_RS00305	COG0251	oxidation-reduction process
JOF24_RS00320	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JOF24_RS00340	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JOF24_RS00345	COG2002	toxin-antitoxin pair type II binding
JOF24_RS00350	COG2244	polysaccharide biosynthetic process
JOF24_RS00355	COG3956	TIGRFAM MazG family protein
JOF24_RS00360	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JOF24_RS00375	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
JOF24_RS00380	COG1098	S1 RNA binding domain
JOF24_RS00395	COG2208	phosphoserine phosphatase activity
JOF24_RS00400	COG2304	oxidoreductase activity
JOF24_RS00405	COG0515	serine threonine protein kinase
JOF24_RS00410	COG0037	tRNA processing
JOF24_RS00415	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JOF24_RS00420	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JOF24_RS00435	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JOF24_RS00440	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JOF24_RS00445	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JOF24_RS00450	COG0512	Glutamine amidotransferase of anthranilate synthase
JOF24_RS00455	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JOF24_RS00460	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JOF24_RS00465	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JOF24_RS00470	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JOF24_RS00475	COG1396	sequence-specific DNA binding
JOF24_RS00480	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JOF24_RS00485	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
JOF24_RS00565	COG4463	regulation of RNA biosynthetic process
JOF24_RS00570	COG3880	PFAM UvrB UvrC protein
JOF24_RS00580	COG0542	response to heat
JOF24_RS00585	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JOF24_RS00590	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
JOF24_RS00595	COG4956	integral membrane protein (PIN domain superfamily)
JOF24_RS00615	COG1045	serine acetyltransferase
JOF24_RS00625	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
JOF24_RS00630	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JOF24_RS00635	COG3688	RNA-binding protein containing a PIN domain
JOF24_RS00640	COG1595	DNA-templated transcription, initiation
JOF24_RS00650	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JOF24_RS00655	COG0250	Participates in transcription elongation, termination and antitermination
JOF24_RS00680	COG2813	Specifically methylates the guanine in position
JOF24_RS00695	COG1358	cellular component organization or biogenesis
JOF24_RS00720	COG0596	Alpha beta hydrolase
JOF24_RS00830	COG0201	protein transport
JOF24_RS00840	COG0024	Methionine aminopeptidase
JOF24_RS00850	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JOF24_RS00875	COG1122	ATPase activity
JOF24_RS00880	COG1122	ATPase activity
JOF24_RS00885	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JOF24_RS00905	COG2226	methyltransferase
JOF24_RS00910	COG2318	DinB family
JOF24_RS00920	COG0860	N-Acetylmuramoyl-L-alanine amidase
JOF24_RS00925	COG0489	protein tyrosine kinase activity
JOF24_RS00935	COG2194	sulfuric ester hydrolase activity
JOF24_RS00940	COG0726	polysaccharide deacetylase
JOF24_RS01000	COG0738	Major facilitator superfamily
JOF24_RS01005	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JOF24_RS01020	COG0659	secondary active sulfate transmembrane transporter activity
JOF24_RS01025	COG0385	Bile acid
JOF24_RS01030	COG2819	hydrolase of the alpha beta superfamily
JOF24_RS01035	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JOF24_RS01040	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JOF24_RS01045	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JOF24_RS01050	COG2207	Transcriptional regulator
JOF24_RS01050	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JOF24_RS01055	COG3876	Protein conserved in bacteria
JOF24_RS01060	COG1472	Belongs to the glycosyl hydrolase 3 family
JOF24_RS01065	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JOF24_RS01070	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JOF24_RS01070	COG1263	PTS System
JOF24_RS01080	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JOF24_RS01085	COG1683	Conserved Protein
JOF24_RS01115	COG1595	DNA-templated transcription, initiation
JOF24_RS01120	COG5662	AntiSigma factor
JOF24_RS01125	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JOF24_RS01130	COG4856	YbbR-like protein
JOF24_RS01185	COG1346	cytolysis
JOF24_RS01190	COG1380	Effector of murein hydrolase LrgA
JOF24_RS01195	COG1846	Transcriptional regulator
JOF24_RS01200	COG1113	amino acid transport
JOF24_RS01205	COG1011	Hydrolase
JOF24_RS01210	COG4585	Histidine kinase
JOF24_RS01215	COG2197	response regulator
JOF24_RS01220	COG1131	(ABC) transporter
JOF24_RS01260	COG0531	amino acid
JOF24_RS01265	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
JOF24_RS01280	COG0584	glycerophosphoryl diester phosphodiesterase
JOF24_RS01285	COG2271	Major facilitator Superfamily
JOF24_RS01295	COG2368	4-hydroxyphenylacetate
JOF24_RS01305	COG3409	Peptidoglycan-binding domain 1 protein
JOF24_RS01320	COG0371	Dehydrogenase
JOF24_RS01330	COG1183	phosphatidylcholine synthase activity
JOF24_RS01335	COG0586	Pfam SNARE associated Golgi protein
JOF24_RS01340	COG0688	phosphatidylethanolamine metabolic process
JOF24_RS01355	COG1301	dicarboxylic acid transport
JOF24_RS01360	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JOF24_RS01365	COG0833	amino acid
JOF24_RS01370	COG2040	homocysteine
JOF24_RS01375	COG1115	amino acid carrier protein
JOF24_RS01380	COG2066	Belongs to the glutaminase family
JOF24_RS01385	COG4191	Histidine kinase
JOF24_RS01390	COG0784	Response regulator, receiver
JOF24_RS01405	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JOF24_RS01410	COG0778	Nitroreductase
JOF24_RS01415	COG0346	lactoylglutathione lyase activity
JOF24_RS01420	COG2259	Doxx family
JOF24_RS01425	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JOF24_RS01435	COG3773	Cell wall hydrolase
JOF24_RS01440	COG3540	Alkaline phosphatase
JOF24_RS01445	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JOF24_RS01450	COG0805	protein transport
JOF24_RS01460	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JOF24_RS01465	COG0477	Major facilitator Superfamily
JOF24_RS01470	COG1309	transcriptional regulator
JOF24_RS01475	COG0252	asparaginase activity
JOF24_RS01480	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
JOF24_RS01485	COG3012	SEC-C Motif Domain Protein
JOF24_RS01485	COG1405	negative regulation of cell septum assembly
JOF24_RS01490	COG0667	Aldo Keto reductase
JOF24_RS01500	COG1595	DNA-templated transcription, initiation
JOF24_RS01505	COG1595	DNA-templated transcription, initiation
JOF24_RS01510	COG1876	peptidase activity
JOF24_RS01515	COG0457	Tetratricopeptide repeat
JOF24_RS01520	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS01525	COG0366	Alpha amylase catalytic
JOF24_RS01530	COG0803	Belongs to the bacterial solute-binding protein 9 family
JOF24_RS01535	COG1121	(ABC) transporter
JOF24_RS01540	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JOF24_RS01545	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JOF24_RS01550	COG2310	stress, protein
JOF24_RS01555	COG2310	stress, protein
JOF24_RS01560	COG2310	stress, protein
JOF24_RS01565	COG0861	Integral membrane protein TerC family
JOF24_RS01575	COG3853	Toxic anion resistance protein (TelA)
JOF24_RS01580	COG0477	Major facilitator Superfamily
JOF24_RS01585	COG4175	Glycine betaine
JOF24_RS01585	COG0517	IMP dehydrogenase activity
JOF24_RS01590	COG4176	ABC-type proline glycine betaine transport system permease component
JOF24_RS01595	COG2113	Glycine betaine
JOF24_RS01600	COG1473	amidohydrolase
JOF24_RS01605	COG1288	antiporter activity
JOF24_RS01615	COG0366	Alpha amylase catalytic
JOF24_RS01625	COG2814	Major facilitator Superfamily
JOF24_RS01630	COG1846	Transcriptional regulator
JOF24_RS01635	COG1280	lysine exporter protein (LysE YggA)
JOF24_RS01640	COG3403	YqcI/YcgG family
JOF24_RS01645	COG1113	amino acid transport
JOF24_RS01650	COG3665	Urea carboxylase-associated protein
JOF24_RS01670	COG1660	Displays ATPase and GTPase activities
JOF24_RS01675	COG1082	Xylose isomerase domain protein TIM barrel
JOF24_RS01680	COG2271	Major facilitator Superfamily
JOF24_RS01685	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JOF24_RS01690	COG3458	cephalosporin-C deacetylase activity
JOF24_RS01695	COG3541	Predicted nucleotidyltransferase
JOF24_RS01700	COG0506	proline dehydrogenase activity
JOF24_RS01705	COG1012	belongs to the aldehyde dehydrogenase family
JOF24_RS01710	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JOF24_RS01715	COG2508	Transcriptional regulator
JOF24_RS01725	COG1587	Uroporphyrinogen-III synthase
JOF24_RS01725	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JOF24_RS01730	COG2146	nitrite reductase [NAD(P)H] activity
JOF24_RS01735	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JOF24_RS01740	COG0243	molybdopterin cofactor binding
JOF24_RS01745	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JOF24_RS01750	COG2223	nitrite transmembrane transporter activity
JOF24_RS01755	COG0523	cobalamin synthesis protein
JOF24_RS01760	COG1063	alcohol dehydrogenase
JOF24_RS01765	COG1714	RDD family
JOF24_RS01775	COG2723	6-phospho-beta-galactosidase activity
JOF24_RS01785	COG3209	COG3209 Rhs family protein
JOF24_RS01790	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
JOF24_RS01795	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
JOF24_RS01800	COG1733	regulation of RNA biosynthetic process
JOF24_RS01805	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS01810	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS01815	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS01820	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
JOF24_RS01835	COG0697	spore germination
JOF24_RS01850	COG2364	Membrane
JOF24_RS01855	COG1126	abc transporter atp-binding protein
JOF24_RS01860	COG0765	amino acid transport
JOF24_RS01865	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JOF24_RS01870	COG0583	DNA-binding transcription factor activity
JOF24_RS01875	COG0163	prenyltransferase activity
JOF24_RS01880	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JOF24_RS01895	COG3104	oligopeptide transport
JOF24_RS01900	COG5434	Belongs to the glycosyl hydrolase 28 family
JOF24_RS01910	COG0697	spore germination
JOF24_RS01920	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JOF24_RS01925	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JOF24_RS01930	COG0456	acetyltransferase
JOF24_RS01935	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JOF24_RS01940	COG0765	amino acid transport
JOF24_RS01945	COG1126	abc transporter atp-binding protein
JOF24_RS01950	COG1473	amidohydrolase
JOF24_RS01955	COG2079	MmgE PrpD family protein
JOF24_RS01960	COG1136	(ABC) transporter
JOF24_RS01965	COG0577	efflux transmembrane transporter activity
JOF24_RS01970	COG0745	RESPONSE REGULATOR receiver
JOF24_RS01975	COG5002	protein histidine kinase activity
JOF24_RS01975	COG3850	Histidine kinase
JOF24_RS01980	COG0457	Tetratricopeptide repeat
JOF24_RS01995	COG0527	aspartate kinase activity
JOF24_RS02000	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JOF24_RS02005	COG4605	iron ion homeostasis
JOF24_RS02010	COG4604	ABC transporter, ATP-binding protein
JOF24_RS02015	COG4607	ABC-type enterochelin transport system periplasmic component
JOF24_RS02020	COG2814	Major facilitator Superfamily
JOF24_RS02025	COG1309	transcriptional regulator
JOF24_RS02030	COG0778	Nitroreductase
JOF24_RS02035	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
JOF24_RS02040	COG0640	Transcriptional regulator
JOF24_RS02045	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JOF24_RS02050	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JOF24_RS02055	COG1012	belongs to the aldehyde dehydrogenase family
JOF24_RS02060	COG4975	Glucose uptake
JOF24_RS02065	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS02070	COG4549	nuclear export factor GLE1
JOF24_RS02075	COG1276	copper resistance
JOF24_RS02075	COG2372	response to copper ion
JOF24_RS02080	COG1349	DNA-binding transcription factor activity
JOF24_RS02090	COG2213	PTS system mannitol-specific
JOF24_RS02095	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JOF24_RS02105	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JOF24_RS02115	COG0561	phosphatase activity
JOF24_RS02125	COG1914	H( )-stimulated, divalent metal cation uptake system
JOF24_RS02135	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
JOF24_RS02140	COG1984	allophanate hydrolase subunit 2
JOF24_RS02145	COG1414	Transcriptional regulator
JOF24_RS02150	COG2755	lipolytic protein G-D-S-L family
JOF24_RS02160	COG2329	Antibiotic biosynthesis monooxygenase
JOF24_RS02165	COG0768	penicillin binding
JOF24_RS02170	COG4989	oxidoreductase activity
JOF24_RS02175	COG3711	transcriptional antiterminator
JOF24_RS02180	COG0318	PFAM AMP-dependent synthetase and ligase
JOF24_RS02185	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS02190	COG1917	Cupin 2, conserved barrel domain protein
JOF24_RS02195	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JOF24_RS02200	COG3871	stress protein (general stress protein 26)
JOF24_RS02210	COG2814	Major facilitator Superfamily
JOF24_RS02215	COG1522	sequence-specific DNA binding
JOF24_RS02220	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JOF24_RS02220	COG0551	DNA topoisomerase type I activity
JOF24_RS02225	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
JOF24_RS02230	COG3706	GGDEF domain
JOF24_RS02235	COG5298	Protein conserved in bacteria
JOF24_RS02240	COG1215	transferase activity, transferring glycosyl groups
JOF24_RS02250	COG0531	amino acid
JOF24_RS02255	COG0494	nUDIX hydrolase
JOF24_RS02260	COG0028	Belongs to the TPP enzyme family
JOF24_RS02265	COG1388	LysM domain
JOF24_RS02265	COG3409	Peptidoglycan-binding domain 1 protein
JOF24_RS02265	COG5632	N-Acetylmuramoyl-L-alanine amidase
JOF24_RS02300	COG1914	H( )-stimulated, divalent metal cation uptake system
JOF24_RS02310	COG4876	unkown
JOF24_RS02320	COG2076	Multidrug Resistance protein
JOF24_RS02325	COG2217	Heavy metal translocating P-type atpase
JOF24_RS02330	COG3729	General stress protein
JOF24_RS02335	COG0662	Cupin 2, conserved barrel domain protein
JOF24_RS02340	COG2329	Antibiotic biosynthesis monooxygenase
JOF24_RS02345	COG3546	catalase activity
JOF24_RS02350	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JOF24_RS02355	COG3290	protein histidine kinase activity
JOF24_RS02360	COG4565	transcriptional regulatory protein
JOF24_RS02365	COG1301	dicarboxylic acid transport
JOF24_RS02370	COG0628	permease
JOF24_RS02375	COG1131	(ABC) transporter
JOF24_RS02380	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JOF24_RS02390	COG1960	acyl-CoA dehydrogenase activity
JOF24_RS02405	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JOF24_RS02410	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JOF24_RS02420	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JOF24_RS02425	COG0513	Belongs to the DEAD box helicase family
JOF24_RS02430	COG3402	PFAM membrane-flanked domain
JOF24_RS02435	COG3428	Bacterial PH domain
JOF24_RS02440	COG0705	Rhomboid family
JOF24_RS02450	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
JOF24_RS02455	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JOF24_RS02460	COG0864	Transcriptional regulator
JOF24_RS02465	COG2337	Toxic component of a toxin-antitoxin (TA) module
JOF24_RS02470	COG1366	Belongs to the anti-sigma-factor antagonist family
JOF24_RS02475	COG1366	Belongs to the anti-sigma-factor antagonist family
JOF24_RS02480	COG2172	sigma factor antagonist activity
JOF24_RS02485	COG2208	phosphoserine phosphatase activity
JOF24_RS02490	COG1366	Belongs to the anti-sigma-factor antagonist family
JOF24_RS02500	COG1191	sigma factor activity
JOF24_RS02505	COG2208	phosphoserine phosphatase activity
JOF24_RS02510	COG2183	response to ionizing radiation
JOF24_RS02560	COG2249	NAD(P)H dehydrogenase (quinone) activity
JOF24_RS02570	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JOF24_RS02575	COG1522	sequence-specific DNA binding
JOF24_RS02595	COG0477	Major facilitator Superfamily
JOF24_RS02625	COG1959	2 iron, 2 sulfur cluster binding
JOF24_RS02630	COG2910	NAD(P)H-binding
JOF24_RS02635	COG1278	Cold shock
JOF24_RS02640	COG1329	Transcriptional regulator
JOF24_RS02645	COG1794	racemase activity, acting on amino acids and derivatives
JOF24_RS02660	COG3621	Patatin-like phospholipase
JOF24_RS02670	COG0662	Cupin 2, conserved barrel domain protein
JOF24_RS02685	COG0277	FAD linked oxidase domain protein
JOF24_RS02710	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JOF24_RS02745	COG0351	phosphomethylpyrimidine kinase
JOF24_RS02760	COG1064	alcohol dehydrogenase
JOF24_RS02765	COG0789	Transcriptional regulator
JOF24_RS02775	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JOF24_RS02790	COG2814	Major facilitator Superfamily
JOF24_RS02795	COG1309	transcriptional regulator
JOF24_RS02800	COG0697	spore germination
JOF24_RS02805	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JOF24_RS02810	COG5577	PFAM Coat F domain
JOF24_RS02820	COG1063	alcohol dehydrogenase
JOF24_RS02825	COG5577	PFAM Coat F domain
JOF24_RS02835	COG4585	Histidine kinase
JOF24_RS02840	COG2197	response regulator
JOF24_RS02845	COG2409	Drug exporters of the RND superfamily
JOF24_RS02850	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
JOF24_RS02855	COG0488	(ABC) transporter
JOF24_RS02860	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JOF24_RS02865	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JOF24_RS02875	COG2814	Major facilitator Superfamily
JOF24_RS02880	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JOF24_RS02890	COG0730	response to heat
JOF24_RS02895	COG0456	acetyltransferase
JOF24_RS02905	COG1051	belongs to the nudix hydrolase family
JOF24_RS02910	COG2226	methyltransferase
JOF24_RS02915	COG0473	3-isopropylmalate dehydrogenase activity
JOF24_RS02920	COG1802	Transcriptional regulator
JOF24_RS02925	COG1819	glycosyl
JOF24_RS02940	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JOF24_RS02950	COG1388	LysM domain
JOF24_RS02955	COG2814	Major facilitator Superfamily
JOF24_RS02960	COG2188	Transcriptional regulator
JOF24_RS02965	COG2186	Transcriptional regulator
JOF24_RS02970	COG2807	transmembrane transport
JOF24_RS02975	COG2076	Multidrug Resistance protein
JOF24_RS02980	COG2076	Multidrug Resistance protein
JOF24_RS02985	COG1309	transcriptional regulator
JOF24_RS02990	COG0531	amino acid
JOF24_RS03000	COG3832	glyoxalase III activity
JOF24_RS03005	COG0604	alcohol dehydrogenase
JOF24_RS03010	COG2814	Major facilitator Superfamily
JOF24_RS03050	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
JOF24_RS03055	COG0802	atpase or kinase
JOF24_RS03060	COG1214	PFAM Peptidase M22, glycoprotease
JOF24_RS03065	COG0456	acetyltransferase
JOF24_RS03070	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JOF24_RS03075	COG0488	(ABC) transporter
JOF24_RS03090	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JOF24_RS03095	COG0805	protein transport
JOF24_RS03105	COG1266	CAAX protease self-immunity
JOF24_RS03125	COG0457	Tetratricopeptide repeat
JOF24_RS03130	COG1063	alcohol dehydrogenase
JOF24_RS03135	COG2211	Major facilitator Superfamily
JOF24_RS03140	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JOF24_RS03150	COG1842	Phage shock protein A
JOF24_RS03155	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JOF24_RS03160	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
JOF24_RS03165	COG4260	virion core protein, lumpy skin disease virus
JOF24_RS03170	COG2755	lipolytic protein G-D-S-L family
JOF24_RS03170	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
JOF24_RS03180	COG1595	DNA-templated transcription, initiation
JOF24_RS03185	COG1063	alcohol dehydrogenase
JOF24_RS03190	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JOF24_RS03195	COG0823	Involved in the tonB-independent uptake of proteins
JOF24_RS03210	COG2132	Multicopper oxidase
JOF24_RS03215	COG1113	amino acid transport
JOF24_RS03220	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JOF24_RS03225	COG0714	Associated with various cellular activities
JOF24_RS03230	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
JOF24_RS03235	COG1305	Transglutaminase-like
JOF24_RS03260	COG2252	PERMEase
JOF24_RS03265	COG3064	Membrane
JOF24_RS03285	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JOF24_RS03290	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JOF24_RS03295	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JOF24_RS03300	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
JOF24_RS03305	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JOF24_RS03320	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JOF24_RS03330	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JOF24_RS03335	COG0138	bifunctional purine biosynthesis protein purh
JOF24_RS03340	COG0151	Belongs to the GarS family
JOF24_RS03350	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
JOF24_RS03355	COG1470	cell adhesion involved in biofilm formation
JOF24_RS03360	COG4496	protein, YerC YecD
JOF24_RS03365	COG0069	glutamate synthase activity
JOF24_RS03375	COG0210	DNA helicase
JOF24_RS03385	COG4851	CamS sex pheromone cAM373 precursor
JOF24_RS03390	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JOF24_RS03395	COG1285	pathogenesis
JOF24_RS03400	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JOF24_RS03420	COG1309	transcriptional regulator
JOF24_RS03425	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JOF24_RS03430	COG1597	lipid kinase activity
JOF24_RS03435	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JOF24_RS03445	COG1131	(ABC) transporter
JOF24_RS03470	COG5444	nuclease activity
JOF24_RS03490	COG5444	nuclease activity
JOF24_RS03520	COG3546	catalase activity
JOF24_RS03525	COG0454	-acetyltransferase
JOF24_RS03535	COG2323	membrane
JOF24_RS03540	COG2329	Antibiotic biosynthesis monooxygenase
JOF24_RS03545	COG0346	lactoylglutathione lyase activity
JOF24_RS03550	COG1366	Belongs to the anti-sigma-factor antagonist family
JOF24_RS03555	COG5583	Uncharacterized small protein (DUF2292)
JOF24_RS03560	COG0196	riboflavin kinase activity
JOF24_RS03565	COG0670	Belongs to the BI1 family
JOF24_RS03575	COG1846	Transcriptional regulator
JOF24_RS03580	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JOF24_RS03590	COG2124	cytochrome p450
JOF24_RS03590	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JOF24_RS03605	COG1131	(ABC) transporter
JOF24_RS03615	COG1368	sulfuric ester hydrolase activity
JOF24_RS03620	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
JOF24_RS03625	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JOF24_RS03630	COG1442	glycosyl transferase family 8
JOF24_RS03635	COG1216	Glycosyl transferase, family 2
JOF24_RS03640	COG1442	glycosyl transferase family 8
JOF24_RS03645	COG2223	nitrite transmembrane transporter activity
JOF24_RS03650	COG0531	amino acid
JOF24_RS03655	COG1012	belongs to the aldehyde dehydrogenase family
JOF24_RS03660	COG0840	transmembrane signaling receptor activity
JOF24_RS03665	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS03670	COG0463	Glycosyl transferase, family 2
JOF24_RS03670	COG0457	Tetratricopeptide repeat
JOF24_RS03675	COG0488	(ABC) transporter
JOF24_RS03680	COG0789	Transcriptional regulator
JOF24_RS03685	COG2814	Major facilitator Superfamily
JOF24_RS03690	COG0488	(ABC) transporter
JOF24_RS03695	COG0513	Belongs to the DEAD box helicase family
JOF24_RS03700	COG0456	acetyltransferase
JOF24_RS03705	COG2130	NADP-dependent
JOF24_RS03720	COG3866	Pectate lyase
JOF24_RS03725	COG0471	metal ion transport
JOF24_RS03740	COG0745	RESPONSE REGULATOR receiver
JOF24_RS03740	COG2972	Histidine kinase
JOF24_RS03745	COG3279	Response regulator of the LytR AlgR family
JOF24_RS03755	COG3764	Sortase (surface protein transpeptidase)
JOF24_RS03760	COG3290	protein histidine kinase activity
JOF24_RS03765	COG4565	transcriptional regulatory protein
JOF24_RS03770	COG3181	Tripartite tricarboxylate transporter family receptor
JOF24_RS03775	COG2851	Citrate transporter
JOF24_RS03780	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JOF24_RS03785	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
JOF24_RS03795	COG2258	MOSC domain
JOF24_RS03815	COG0024	Methionine aminopeptidase
JOF24_RS03820	COG1263	PTS System
JOF24_RS03820	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JOF24_RS03830	COG1368	sulfuric ester hydrolase activity
JOF24_RS03840	COG0071	Belongs to the small heat shock protein (HSP20) family
JOF24_RS03855	COG1263	PTS System
JOF24_RS03855	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JOF24_RS03860	COG0366	Alpha amylase catalytic
JOF24_RS03865	COG2188	Transcriptional regulator
JOF24_RS03870	COG0778	Nitroreductase
JOF24_RS03885	COG0737	Belongs to the 5'-nucleotidase family
JOF24_RS03890	COG0693	protein deglycase activity
JOF24_RS03895	COG1609	Transcriptional regulator
JOF24_RS03910	COG2814	Major facilitator Superfamily
JOF24_RS03920	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JOF24_RS03925	COG4980	gas vesicle protein
JOF24_RS03930	COG1295	ribonuclease BN
JOF24_RS03935	COG0477	Major facilitator Superfamily
JOF24_RS03940	COG0387	Pfam Sodium calcium exchanger
JOF24_RS03950	COG0668	transmembrane transport
JOF24_RS03955	COG0535	radical SAM domain protein
JOF24_RS03965	COG0726	polysaccharide deacetylase
JOF24_RS03970	COG2084	Dehydrogenase
JOF24_RS03980	COG0598	Magnesium transport protein CorA
JOF24_RS03985	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
JOF24_RS03990	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JOF24_RS04000	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JOF24_RS04005	COG4637	Psort location Cytoplasmic, score
JOF24_RS04010	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JOF24_RS04015	COG0022	dehydrogenase e1 component
JOF24_RS04020	COG0508	dehydrogenase complex catalyzes the overall conversion of
JOF24_RS04025	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JOF24_RS04030	COG3284	Transcriptional regulator
JOF24_RS04040	COG1486	melibiose metabolic process
JOF24_RS04045	COG1737	Transcriptional regulator
JOF24_RS04050	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JOF24_RS04050	COG1263	PTS System
JOF24_RS04055	COG1132	(ABC) transporter
JOF24_RS04060	COG1132	(ABC) transporter
JOF24_RS04065	COG2259	Doxx family
JOF24_RS04070	COG2514	catechol 2,3-dioxygenase activity
JOF24_RS04080	COG1695	Transcriptional regulator
JOF24_RS04085	COG2249	NAD(P)H dehydrogenase (quinone) activity
JOF24_RS04090	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
JOF24_RS04095	COG0574	Belongs to the PEP-utilizing enzyme family
JOF24_RS04095	COG3848	Pyruvate phosphate dikinase
JOF24_RS04100	COG2732	(Barnase) inhibitor
JOF24_RS04105	COG2318	DinB family
JOF24_RS04110	COG2814	Major facilitator Superfamily
JOF24_RS04115	COG1846	Transcriptional regulator
JOF24_RS04120	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JOF24_RS04120	COG0392	lysyltransferase activity
JOF24_RS04125	COG0384	phenazine biosynthesis protein PhzF
JOF24_RS04130	COG0778	Nitroreductase
JOF24_RS04145	COG1090	epimerase
JOF24_RS04160	COG2814	Major facilitator Superfamily
JOF24_RS04170	COG3591	Belongs to the peptidase S1B family
JOF24_RS04185	COG3103	Sh3 type 3 domain protein
JOF24_RS04190	COG5658	integral membrane protein
JOF24_RS04195	COG0596	Alpha beta hydrolase
JOF24_RS04200	COG0463	Glycosyl transferase, family 2
JOF24_RS04205	COG4485	Bacterial membrane protein, YfhO
JOF24_RS04210	COG1988	membrane-bound metal-dependent
JOF24_RS04215	COG1194	a g-specific adenine glycosylase
JOF24_RS04225	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS04245	COG1132	(ABC) transporter
JOF24_RS04250	COG4129	membrane
JOF24_RS04260	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JOF24_RS04265	COG0735	belongs to the Fur family
JOF24_RS04375	COG1757	Na H antiporter
JOF24_RS04380	COG3340	Belongs to the peptidase S51 family
JOF24_RS04390	COG0277	FAD linked oxidase domain protein
JOF24_RS04400	COG0747	negative chemotaxis
JOF24_RS04405	COG0601	transmembrane transport
JOF24_RS04410	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JOF24_RS04415	COG0444	Belongs to the ABC transporter superfamily
JOF24_RS04420	COG4608	Belongs to the ABC transporter superfamily
JOF24_RS04425	COG0753	catalase activity
JOF24_RS04435	COG1116	anion transmembrane transporter activity
JOF24_RS04440	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JOF24_RS04445	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JOF24_RS04465	COG1476	TRANSCRIPTIONal
JOF24_RS04475	COG3382	B3 4 domain protein
JOF24_RS04480	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JOF24_RS04490	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JOF24_RS04495	COG0789	Transcriptional regulator
JOF24_RS04500	COG1664	Polymer-forming cytoskeletal
JOF24_RS04505	COG1664	Polymer-forming cytoskeletal
JOF24_RS04510	COG2766	serine protein kinase
JOF24_RS04520	COG1846	Transcriptional regulator
JOF24_RS04525	COG1566	PFAM secretion protein HlyD family protein
JOF24_RS04530	COG2814	Major facilitator Superfamily
JOF24_RS04535	COG0655	NAD(P)H dehydrogenase (quinone) activity
JOF24_RS04550	COG1725	Transcriptional regulator
JOF24_RS04555	COG1131	(ABC) transporter
JOF24_RS04560	COG1131	(ABC) transporter
JOF24_RS04565	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JOF24_RS04570	COG1278	Cold shock
JOF24_RS04575	COG1464	Belongs to the NlpA lipoprotein family
JOF24_RS04580	COG3706	GGDEF domain
JOF24_RS04585	COG1823	symporter activity
JOF24_RS04605	COG5577	PFAM Coat F domain
JOF24_RS04610	COG4085	toxin activity
JOF24_RS04610	COG1525	nuclease
JOF24_RS04610	COG0737	Belongs to the 5'-nucleotidase family
JOF24_RS04615	COG3764	Sortase (surface protein transpeptidase)
JOF24_RS04620	COG0564	pseudouridine synthase activity
JOF24_RS04630	COG0517	IMP dehydrogenase activity
JOF24_RS04635	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JOF24_RS04640	COG3153	acetyltransferase
JOF24_RS04640	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JOF24_RS04645	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JOF24_RS04650	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
JOF24_RS04655	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JOF24_RS04665	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JOF24_RS04670	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JOF24_RS04680	COG2197	response regulator
JOF24_RS04685	COG0431	NADPH-dependent FMN reductase
JOF24_RS04700	COG0791	NLP P60 protein
JOF24_RS04700	COG1388	LysM domain
JOF24_RS04705	COG1959	2 iron, 2 sulfur cluster binding
JOF24_RS04710	COG0668	transmembrane transport
JOF24_RS04715	COG2719	SpoVR family
JOF24_RS04720	COG1785	Belongs to the alkaline phosphatase family
JOF24_RS04725	COG0791	NLP P60 protein
JOF24_RS04725	COG1388	LysM domain
JOF24_RS04730	COG0583	DNA-binding transcription factor activity
JOF24_RS04735	COG0372	Belongs to the citrate synthase family
JOF24_RS04740	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS04745	COG0531	amino acid
JOF24_RS04750	COG0733	neurotransmitter:sodium symporter activity
JOF24_RS04765	COG1595	DNA-templated transcription, initiation
JOF24_RS04770	COG0204	Acyl-transferase
JOF24_RS04775	COG1253	flavin adenine dinucleotide binding
JOF24_RS04780	COG0789	Transcriptional regulator
JOF24_RS04785	COG0436	Aminotransferase
JOF24_RS04790	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JOF24_RS04795	COG1253	flavin adenine dinucleotide binding
JOF24_RS04800	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JOF24_RS04805	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JOF24_RS04810	COG0584	glycerophosphoryl diester phosphodiesterase
JOF24_RS04820	COG0668	transmembrane transport
JOF24_RS04825	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JOF24_RS04830	COG0726	polysaccharide deacetylase
JOF24_RS04835	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JOF24_RS04840	COG3226	Transcriptional regulator
JOF24_RS04850	COG0589	response to stress
JOF24_RS04855	COG1132	(ABC) transporter
JOF24_RS04860	COG1132	(ABC) transporter
JOF24_RS04865	COG0702	epimerase
JOF24_RS04880	COG0189	ligase activity
JOF24_RS04885	COG0189	ligase activity
JOF24_RS04900	COG4335	DNA alkylation repair
JOF24_RS04905	COG0561	phosphatase activity
JOF24_RS04910	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JOF24_RS04920	COG0475	glutathione-regulated potassium exporter activity
JOF24_RS04925	COG0490	domain, Protein
JOF24_RS04935	COG1024	Enoyl-CoA hydratase
JOF24_RS04945	COG4152	abc transporter atp-binding protein
JOF24_RS04950	COG1668	transmembrane transport
JOF24_RS04955	COG0420	3'-5' exonuclease activity
JOF24_RS04960	COG4717	serine-type aminopeptidase activity
JOF24_RS04975	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JOF24_RS05010	COG4980	gas vesicle protein
JOF24_RS05025	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
JOF24_RS05030	COG0537	adenosine 5'-monophosphoramidase activity
JOF24_RS05035	COG1131	(ABC) transporter
JOF24_RS05040	COG4473	ABC transporter
JOF24_RS05050	COG1473	amidohydrolase
JOF24_RS05055	COG3069	C4-dicarboxylate transmembrane transporter activity
JOF24_RS05060	COG2329	Antibiotic biosynthesis monooxygenase
JOF24_RS05065	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JOF24_RS05075	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
JOF24_RS05080	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
JOF24_RS05085	COG1309	transcriptional regulator
JOF24_RS05090	COG1511	domain protein
JOF24_RS05095	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JOF24_RS05105	COG1363	Peptidase, m42
JOF24_RS05110	COG1301	dicarboxylic acid transport
JOF24_RS05120	COG1234	tRNA 3'-trailer cleavage
JOF24_RS05125	COG0095	Lipoate-protein ligase
JOF24_RS05130	COG0702	epimerase
JOF24_RS05135	COG0318	PFAM AMP-dependent synthetase and ligase
JOF24_RS05145	COG0501	Belongs to the peptidase M48B family
JOF24_RS05150	COG1404	Belongs to the peptidase S8 family
JOF24_RS05155	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
JOF24_RS05160	COG0406	alpha-ribazole phosphatase activity
JOF24_RS05165	COG0183	Belongs to the thiolase family
JOF24_RS05170	COG0318	PFAM AMP-dependent synthetase and ligase
JOF24_RS05175	COG1268	BioY protein
JOF24_RS05180	COG0840	transmembrane signaling receptor activity
JOF24_RS05185	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JOF24_RS05185	COG0723	plastoquinol--plastocyanin reductase activity
JOF24_RS05190	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS05200	COG4903	ComK protein
JOF24_RS05210	COG5646	InterPro IPR014922
JOF24_RS05235	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JOF24_RS05250	COG0398	Pfam SNARE associated Golgi protein
JOF24_RS05255	COG0681	Belongs to the peptidase S26 family
JOF24_RS05260	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JOF24_RS05265	COG1846	Transcriptional regulator
JOF24_RS05270	COG3180	Ammonia monooxygenase
JOF24_RS05275	COG2814	Major facilitator Superfamily
JOF24_RS05285	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
JOF24_RS05290	COG2323	membrane
JOF24_RS05305	COG0420	3'-5' exonuclease activity
JOF24_RS05310	COG0419	ATPase involved in DNA repair
JOF24_RS05315	COG1403	HNH endonuclease
JOF24_RS05355	COG0179	Fumarylacetoacetate (FAA) hydrolase
JOF24_RS05375	COG0367	asparagine synthase
JOF24_RS05380	COG1562	ergosterol biosynthetic process
JOF24_RS05385	COG0534	Mate efflux family protein
JOF24_RS05390	COG1917	Cupin 2, conserved barrel domain protein
JOF24_RS05390	COG2207	Transcriptional regulator
JOF24_RS05395	COG2318	DinB family
JOF24_RS05400	COG1279	arginine transmembrane transporter activity
JOF24_RS05405	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JOF24_RS05410	COG1357	PFAM Pentapeptide repeats (8 copies)
JOF24_RS05415	COG2153	protein acetylation
JOF24_RS05420	COG0646	methionine synthase
JOF24_RS05420	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
JOF24_RS05430	COG2996	Protein conserved in bacteria
JOF24_RS05435	COG1744	ABC transporter substrate-binding protein PnrA-like
JOF24_RS05440	COG0840	transmembrane signaling receptor activity
JOF24_RS05445	COG2124	cytochrome p450
JOF24_RS05455	COG1307	EDD domain protein, DegV family
JOF24_RS05460	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JOF24_RS05480	COG0561	phosphatase activity
JOF24_RS05485	COG1073	alpha beta
JOF24_RS05490	COG2151	metal-sulfur cluster biosynthetic enzyme
JOF24_RS05500	COG0277	FAD linked oxidase domain protein
JOF24_RS05505	COG2271	Major facilitator Superfamily
JOF24_RS05515	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
JOF24_RS05525	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JOF24_RS05530	COG0505	Belongs to the CarA family
JOF24_RS05535	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
JOF24_RS05540	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JOF24_RS05555	COG2267	carboxylic ester hydrolase activity
JOF24_RS05565	COG1744	ABC transporter substrate-binding protein PnrA-like
JOF24_RS05580	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JOF24_RS05585	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JOF24_RS05590	COG5504	Zn-dependent protease
JOF24_RS05595	COG0444	Belongs to the ABC transporter superfamily
JOF24_RS05600	COG4608	Belongs to the ABC transporter superfamily
JOF24_RS05610	COG0601	transmembrane transport
JOF24_RS05615	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JOF24_RS05625	COG0180	Tryptophanyl-tRNA synthetase
JOF24_RS05630	COG4166	transmembrane transport
JOF24_RS05635	COG0601	transmembrane transport
JOF24_RS05640	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JOF24_RS05645	COG0444	Belongs to the ABC transporter superfamily
JOF24_RS05650	COG4608	Belongs to the ABC transporter superfamily
JOF24_RS05660	COG0456	acetyltransferase
JOF24_RS05665	COG1393	Belongs to the ArsC family
JOF24_RS05670	COG0861	Integral membrane protein TerC family
JOF24_RS05675	COG4862	establishment of competence for transformation
JOF24_RS05680	COG4469	Competence protein
JOF24_RS05685	COG1164	Oligoendopeptidase f
JOF24_RS05695	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
JOF24_RS05700	COG2346	COG2346, Truncated hemoglobins
JOF24_RS05705	COG0741	lytic transglycosylase activity
JOF24_RS05710	COG4116	CYTH
JOF24_RS05720	COG2357	RelA SpoT domain protein
JOF24_RS05725	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JOF24_RS05730	COG0564	pseudouridine synthase activity
JOF24_RS05740	COG0475	glutathione-regulated potassium exporter activity
JOF24_RS05740	COG0569	domain protein
JOF24_RS05745	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
JOF24_RS05750	COG0352	thiamine-phosphate diphosphorylase activity
JOF24_RS05755	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JOF24_RS05760	COG2104	thiamine diphosphate biosynthetic process
JOF24_RS05770	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JOF24_RS05775	COG0351	phosphomethylpyrimidine kinase
JOF24_RS05780	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JOF24_RS05835	COG0210	DNA helicase
JOF24_RS05855	COG1131	(ABC) transporter
JOF24_RS05865	COG2153	protein acetylation
JOF24_RS05875	COG2382	esterase
JOF24_RS05880	COG0626	cystathionine gamma-synthase activity
JOF24_RS05885	COG0626	cystathionine gamma-synthase activity
JOF24_RS05965	COG5444	nuclease activity
JOF24_RS05995	COG0135	phosphoribosylanthranilate isomerase activity
JOF24_RS06005	COG2367	Beta-lactamase
JOF24_RS06010	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
JOF24_RS06020	COG1846	Transcriptional regulator
JOF24_RS06030	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
JOF24_RS06035	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JOF24_RS06040	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JOF24_RS06045	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JOF24_RS06045	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JOF24_RS06050	COG1447	Phosphotransferase system cellobiose-specific component IIA
JOF24_RS06080	COG1285	pathogenesis
JOF24_RS06095	COG2205	protein histidine kinase activity
JOF24_RS06105	COG3383	formate dehydrogenase (NAD+) activity
JOF24_RS06110	COG2427	Protein of unknown function (DUF1641)
JOF24_RS06115	COG2124	cytochrome p450
JOF24_RS06120	COG1819	glycosyl
JOF24_RS06130	COG1587	Uroporphyrinogen-III synthase
JOF24_RS06135	COG0390	transport system, permease component
JOF24_RS06140	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JOF24_RS06145	COG0697	spore germination
JOF24_RS06150	COG4297	protein containing double-stranded beta helix domain
JOF24_RS06160	COG1252	NADH dehydrogenase
JOF24_RS06170	COG2211	Major facilitator Superfamily
JOF24_RS06175	COG1609	Transcriptional regulator
JOF24_RS06180	COG0246	Mannitol dehydrogenase
JOF24_RS06185	COG2721	sulfolactate sulfo-lyase activity
JOF24_RS06190	COG0730	response to heat
JOF24_RS06195	COG2318	DinB family
JOF24_RS06200	COG0457	Tetratricopeptide repeat
JOF24_RS06210	COG1388	LysM domain
JOF24_RS06210	COG3409	Peptidoglycan-binding domain 1 protein
JOF24_RS06210	COG5632	N-Acetylmuramoyl-L-alanine amidase
JOF24_RS06220	COG4195	phage-related replication protein
JOF24_RS06225	COG3546	catalase activity
JOF24_RS06230	COG2856	Zn peptidase
JOF24_RS06235	COG1396	sequence-specific DNA binding
JOF24_RS06245	COG1522	sequence-specific DNA binding
JOF24_RS06250	COG1484	DNA-dependent DNA replication
JOF24_RS06270	COG1595	DNA-templated transcription, initiation
JOF24_RS06275	COG5484	DNA packaging
JOF24_RS06275	COG3728	DNA packaging
JOF24_RS06280	COG1783	phage Terminase large subunit
JOF24_RS06285	COG5518	Phage portal protein
JOF24_RS06290	COG0338	D12 class N6 adenine-specific DNA methyltransferase
JOF24_RS06295	COG4653	Phage capsid family
JOF24_RS06345	COG5412	phage tail tape measure protein
JOF24_RS06345	COG3953	SLT domain
JOF24_RS06345	COG3953	SLT domain
JOF24_RS06345	COG5412	phage tail tape measure protein
JOF24_RS06345	COG3953	SLT domain
JOF24_RS06345	COG5412	phage tail tape measure protein
JOF24_RS06350	COG1652	LysM domain
JOF24_RS06355	COG4193	domain, Protein
JOF24_RS06365	COG3628	GPW Gp25 family protein
JOF24_RS06370	COG3299	homolog of phage Mu protein gp47
JOF24_RS06375	COG3778	Protein conserved in bacteria
JOF24_RS06415	COG3409	Peptidoglycan-binding domain 1 protein
JOF24_RS06415	COG5632	N-Acetylmuramoyl-L-alanine amidase
JOF24_RS06430	COG0306	phosphate transporter
JOF24_RS06435	COG1392	Phosphate transport regulator
JOF24_RS06440	COG0531	amino acid
JOF24_RS06445	COG0346	lactoylglutathione lyase activity
JOF24_RS06450	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
JOF24_RS06455	COG0463	Glycosyl transferase, family 2
JOF24_RS06465	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JOF24_RS06470	COG0477	Major facilitator Superfamily
JOF24_RS06475	COG2362	D-Aminopeptidase
JOF24_RS06480	COG0601	transmembrane transport
JOF24_RS06485	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JOF24_RS06490	COG0444	Belongs to the ABC transporter superfamily
JOF24_RS06495	COG4166	transmembrane transport
JOF24_RS06500	COG1619	proteins homologs of microcin C7 resistance protein MccF
JOF24_RS06505	COG4948	Mandelate Racemase Muconate Lactonizing
JOF24_RS06510	COG0791	NLP P60 protein
JOF24_RS06515	COG4608	Belongs to the ABC transporter superfamily
JOF24_RS06520	COG2706	6-phosphogluconolactonase activity
JOF24_RS06525	COG1834	amidinotransferase
JOF24_RS06530	COG1607	acyl-coa hydrolase
JOF24_RS06535	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JOF24_RS06540	COG2076	Multidrug Resistance protein
JOF24_RS06545	COG2076	Multidrug Resistance protein
JOF24_RS06550	COG0788	formyltetrahydrofolate deformylase activity
JOF24_RS06555	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JOF24_RS06565	COG1764	response to oxidative stress
JOF24_RS06570	COG1846	Transcriptional regulator
JOF24_RS06575	COG1764	response to oxidative stress
JOF24_RS06590	COG0463	Glycosyl transferase, family 2
JOF24_RS06590	COG0457	Tetratricopeptide repeat
JOF24_RS06600	COG2814	Major facilitator Superfamily
JOF24_RS06605	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JOF24_RS06615	COG1404	Belongs to the peptidase S8 family
JOF24_RS06620	COG1366	Belongs to the anti-sigma-factor antagonist family
JOF24_RS06625	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JOF24_RS06635	COG4721	ABC-type cobalt transport system, permease component
JOF24_RS06640	COG3858	chitin binding
JOF24_RS06640	COG1388	LysM domain
JOF24_RS06650	COG2239	Acts as a magnesium transporter
JOF24_RS06655	COG0789	Transcriptional regulator
JOF24_RS06670	COG1846	Transcriptional regulator
JOF24_RS06675	COG0726	polysaccharide deacetylase
JOF24_RS06680	COG1793	dna ligase
JOF24_RS06680	COG3285	dna ligase
JOF24_RS06685	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
JOF24_RS06690	COG0586	Pfam SNARE associated Golgi protein
JOF24_RS06695	COG0861	Integral membrane protein TerC family
JOF24_RS06700	COG1191	sigma factor activity
JOF24_RS06725	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JOF24_RS06730	COG2323	membrane
JOF24_RS06740	COG3594	Acyltransferase
JOF24_RS06745	COG5002	protein histidine kinase activity
JOF24_RS06750	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JOF24_RS06765	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JOF24_RS06770	COG0436	Aminotransferase
JOF24_RS06800	COG3852	Histidine kinase
JOF24_RS06805	COG1846	Transcriptional regulator
JOF24_RS06810	COG1360	Flagellar Motor Protein
JOF24_RS06815	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JOF24_RS06820	COG0542	response to heat
JOF24_RS06825	COG3949	Membrane
JOF24_RS06840	COG0720	synthase
JOF24_RS06845	COG0602	queuosine metabolic process
JOF24_RS06855	COG1733	regulation of RNA biosynthetic process
JOF24_RS06860	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS06880	COG4873	Protein conserved in bacteria
JOF24_RS06890	COG3773	Cell wall hydrolase
JOF24_RS06895	COG2244	polysaccharide biosynthetic process
JOF24_RS06900	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JOF24_RS06905	COG2217	Heavy metal translocating P-type atpase
JOF24_RS06910	COG0006	proline dipeptidase activity
JOF24_RS06915	COG1609	Transcriptional regulator
JOF24_RS06920	COG3711	transcriptional antiterminator
JOF24_RS06925	COG2190	(PTS) system
JOF24_RS06925	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JOF24_RS06925	COG1263	PTS System
JOF24_RS06930	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JOF24_RS06935	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JOF24_RS06945	COG1533	DNA photolyase activity
JOF24_RS06950	COG0840	transmembrane signaling receptor activity
JOF24_RS06955	COG2084	Dehydrogenase
JOF24_RS06960	COG2340	Cysteine-rich secretory protein family
JOF24_RS06965	COG0768	penicillin binding
JOF24_RS06970	COG4191	Histidine kinase
JOF24_RS06975	COG0436	Aminotransferase
JOF24_RS06985	COG0784	Response regulator, receiver
JOF24_RS06985	COG0835	chemotaxis
JOF24_RS06995	COG2814	Major facilitator Superfamily
JOF24_RS07000	COG1376	ErfK ybiS ycfS ynhG family protein
JOF24_RS07005	COG1408	metallophosphoesterase
JOF24_RS07010	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS07020	COG2200	EAL domain
JOF24_RS07025	COG4703	Protein of unknown function (DUF1797)
JOF24_RS07030	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
JOF24_RS07040	COG0517	IMP dehydrogenase activity
JOF24_RS07045	COG0583	DNA-binding transcription factor activity
JOF24_RS07050	COG0716	FMN binding
JOF24_RS07060	COG0716	FMN binding
JOF24_RS07080	COG0668	transmembrane transport
JOF24_RS07085	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JOF24_RS07105	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JOF24_RS07110	COG0303	'Molybdopterin
JOF24_RS07115	COG1763	Mo-molybdopterin cofactor biosynthetic process
JOF24_RS07120	COG0314	molybdopterin synthase activity
JOF24_RS07125	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
JOF24_RS07135	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JOF24_RS07140	COG1136	(ABC) transporter
JOF24_RS07145	COG0577	efflux transmembrane transporter activity
JOF24_RS07150	COG1349	DNA-binding transcription factor activity
JOF24_RS07155	COG1105	Belongs to the carbohydrate kinase PfkB family
JOF24_RS07160	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JOF24_RS07160	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JOF24_RS07160	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JOF24_RS07165	COG0681	Belongs to the peptidase S26 family
JOF24_RS07175	COG0488	(ABC) transporter
JOF24_RS07180	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JOF24_RS07185	COG2309	aminopeptidase activity
JOF24_RS07195	COG1077	Cell shape determining protein MreB Mrl
JOF24_RS07200	COG2002	toxin-antitoxin pair type II binding
JOF24_RS07205	COG3852	Histidine kinase
JOF24_RS07210	COG2105	PFAM AIG2 family protein
JOF24_RS07210	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
JOF24_RS07215	COG0569	domain protein
JOF24_RS07225	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JOF24_RS07235	COG0561	phosphatase activity
JOF24_RS07240	COG0242	peptide deformylase activity
JOF24_RS07250	COG0497	DNA recombination
JOF24_RS07260	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS07260	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS07260	COG4221	oxidoreductase activity
JOF24_RS07260	COG3321	synthase
JOF24_RS07265	COG3321	synthase
JOF24_RS07265	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JOF24_RS07265	COG4221	oxidoreductase activity
JOF24_RS07265	COG0300	oxidoreductase activity
JOF24_RS07270	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS07270	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS07270	COG3321	synthase
JOF24_RS07270	COG4221	oxidoreductase activity
JOF24_RS07275	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JOF24_RS07275	COG0300	oxidoreductase activity
JOF24_RS07275	COG4221	oxidoreductase activity
JOF24_RS07275	COG3321	synthase
JOF24_RS07280	COG4221	oxidoreductase activity
JOF24_RS07280	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JOF24_RS07280	COG3321	synthase
JOF24_RS07280	COG0300	oxidoreductase activity
JOF24_RS07285	COG4221	oxidoreductase activity
JOF24_RS07285	COG3321	synthase
JOF24_RS07285	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JOF24_RS07285	COG0300	oxidoreductase activity
JOF24_RS07290	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS07290	COG3321	synthase
JOF24_RS07290	COG4221	oxidoreductase activity
JOF24_RS07290	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS07295	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JOF24_RS07300	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JOF24_RS07305	COG0022	dehydrogenase e1 component
JOF24_RS07310	COG0508	dehydrogenase complex catalyzes the overall conversion of
JOF24_RS07315	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JOF24_RS07320	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JOF24_RS07335	COG1982	Orn Lys Arg decarboxylase major
JOF24_RS07355	COG0483	inositol monophosphate 1-phosphatase activity
JOF24_RS07365	COG3227	Zinc metalloprotease (Elastase)
JOF24_RS07380	COG1595	DNA-templated transcription, initiation
JOF24_RS07400	COG1217	gtp-binding protein TYPA
JOF24_RS07410	COG4896	Protein conserved in bacteria
JOF24_RS07420	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
JOF24_RS07425	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JOF24_RS07430	COG2066	Belongs to the glutaminase family
JOF24_RS07440	COG0772	Belongs to the SEDS family
JOF24_RS07445	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
JOF24_RS07460	COG2010	Cytochrome c
JOF24_RS07460	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JOF24_RS07465	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JOF24_RS07470	COG1845	cytochrome c oxidase, subunit III
JOF24_RS07475	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
JOF24_RS07480	COG3336	cytochrome c oxidase
JOF24_RS07490	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
JOF24_RS07495	COG2340	Cysteine-rich secretory protein family
JOF24_RS07510	COG3679	Belongs to the UPF0342 family
JOF24_RS07520	COG0742	ribosomal rna small subunit methyltransferase
JOF24_RS07530	COG3314	Sporulation integral membrane protein YlbJ
JOF24_RS07535	COG1752	Esterase of the alpha-beta hydrolase superfamily
JOF24_RS07540	COG3480	Lon protease (S16) C-terminal proteolytic domain
JOF24_RS07550	COG1399	metal-binding, possibly nucleic acid-binding protein
JOF24_RS07570	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JOF24_RS07590	COG4839	cell division protein FtsL
JOF24_RS07595	COG0768	penicillin binding
JOF24_RS07600	COG0768	penicillin binding
JOF24_RS07620	COG0772	Belongs to the SEDS family
JOF24_RS07635	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
JOF24_RS07640	COG0849	cell division
JOF24_RS07645	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JOF24_RS07650	COG1404	Belongs to the peptidase S8 family
JOF24_RS07650	COG4412	M6 family metalloprotease domain protein
JOF24_RS07660	COG1191	sigma factor activity
JOF24_RS07665	COG1191	sigma factor activity
JOF24_RS07670	COG1119	ATPase activity
JOF24_RS07675	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JOF24_RS07680	COG1873	PFAM PRC-barrel domain
JOF24_RS07685	COG1496	oxidoreductase activity
JOF24_RS07690	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JOF24_RS07700	COG0762	integral membrane protein
JOF24_RS07705	COG2302	S4 RNA-binding domain
JOF24_RS07710	COG3599	regulation of cell shape
JOF24_RS07715	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JOF24_RS07720	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JOF24_RS07730	COG0564	pseudouridine synthase activity
JOF24_RS07740	COG2233	PERMEase
JOF24_RS07750	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JOF24_RS07755	COG0505	Belongs to the CarA family
JOF24_RS07760	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
JOF24_RS07775	COG0284	orotidine-5'-phosphate decarboxylase activity
JOF24_RS07780	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JOF24_RS07790	COG0306	phosphate transporter
JOF24_RS07805	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JOF24_RS07810	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
JOF24_RS07815	COG1648	precorrin-2 dehydrogenase activity
JOF24_RS07825	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JOF24_RS07830	COG1561	YicC-like family, N-terminal region
JOF24_RS07840	COG0194	GDP metabolic process
JOF24_RS07850	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JOF24_RS07855	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JOF24_RS07860	COG0242	peptide deformylase activity
JOF24_RS07870	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JOF24_RS07870	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JOF24_RS07880	COG0631	protein serine/threonine phosphatase activity
JOF24_RS07885	COG2815	serine threonine protein kinase
JOF24_RS07885	COG0515	serine threonine protein kinase
JOF24_RS07895	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JOF24_RS07900	COG1564	THIamine pyrophosphokinase
JOF24_RS07915	COG1302	Protein conserved in bacteria
JOF24_RS07920	COG1461	Dihydroxyacetone kinase
JOF24_RS07925	COG1760	l-serine dehydratase
JOF24_RS07930	COG1760	l-serine dehydratase
JOF24_RS07935	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JOF24_RS07950	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JOF24_RS07955	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS07970	COG1196	nuclear chromosome segregation
JOF24_RS07975	COG0552	protein localization to endoplasmic reticulum
JOF24_RS07990	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JOF24_RS08000	COG1837	Belongs to the UPF0109 family
JOF24_RS08025	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JOF24_RS08040	COG2257	FlhB HrpN YscU SpaS Family
JOF24_RS08050	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JOF24_RS08055	COG0758	DNA mediated transformation
JOF24_RS08060	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JOF24_RS08070	COG4974	Belongs to the 'phage' integrase family
JOF24_RS08090	COG1815	bacterial-type flagellum-dependent cell motility
JOF24_RS08095	COG1558	bacterial-type flagellum-dependent cell motility
JOF24_RS08100	COG1677	Flagellar hook-basal body complex protein FliE
JOF24_RS08105	COG1766	The M ring may be actively involved in energy transduction
JOF24_RS08110	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JOF24_RS08115	COG1317	bacterial-type flagellum organization
JOF24_RS08120	COG1157	protein secretion by the type III secretion system
JOF24_RS08125	COG2882	bacterial-type flagellum organization
JOF24_RS08130	COG3334	PFAM MgtE intracellular
JOF24_RS08135	COG3144	bacterial-type flagellum assembly
JOF24_RS08140	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
JOF24_RS08145	COG4786	Flagellar basal body rod
JOF24_RS08150	COG1582	Flagellar protein (FlbD)
JOF24_RS08155	COG1580	Controls the rotational direction of flagella during chemotaxis
JOF24_RS08160	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JOF24_RS08165	COG1776	CheC inhibitor of MCP methylation
JOF24_RS08165	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JOF24_RS08170	COG2201	protein-glutamate methylesterase activity
JOF24_RS08175	COG3190	flagellar
JOF24_RS08180	COG1338	Plays a role in the flagellum-specific transport system
JOF24_RS08185	COG1987	bacterial-type flagellum assembly
JOF24_RS08190	COG1684	flagellar biosynthetic protein fliR
JOF24_RS08195	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JOF24_RS08200	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JOF24_RS08205	COG1419	protein localization to endoplasmic reticulum
JOF24_RS08210	COG0455	bacterial-type flagellum organization
JOF24_RS08215	COG2201	protein-glutamate methylesterase activity
JOF24_RS08220	COG0643	Histidine kinase
JOF24_RS08220	COG2198	Histidine kinase
JOF24_RS08225	COG0835	chemotaxis
JOF24_RS08230	COG1776	CheC inhibitor of MCP methylation
JOF24_RS08240	COG1191	sigma factor activity
JOF24_RS08270	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JOF24_RS08275	COG4589	Belongs to the CDS family
JOF24_RS08285	COG0750	zinc metalloprotease
JOF24_RS08295	COG2176	DNA-directed DNA polymerase activity
JOF24_RS08305	COG0195	Participates in both transcription termination and antitermination
JOF24_RS08310	COG2740	Nucleic-acid-binding protein implicated in transcription termination
JOF24_RS08315	COG1358	cellular component organization or biogenesis
JOF24_RS08325	COG1550	Protein conserved in bacteria
JOF24_RS08340	COG0196	riboflavin kinase activity
JOF24_RS08355	COG0726	polysaccharide deacetylase
JOF24_RS08360	COG0612	Peptidase, M16
JOF24_RS08365	COG1873	PFAM PRC-barrel domain
JOF24_RS08370	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JOF24_RS08375	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JOF24_RS08380	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JOF24_RS08385	COG0527	aspartate kinase activity
JOF24_RS08395	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JOF24_RS08400	COG0740	serine-type endopeptidase activity
JOF24_RS08410	COG4980	gas vesicle protein
JOF24_RS08410	COG1674	ftsk spoiiie
JOF24_RS08415	COG2188	Transcriptional regulator
JOF24_RS08420	COG2814	Major facilitator Superfamily
JOF24_RS08425	COG1846	Transcriptional regulator
JOF24_RS08430	COG2409	Drug exporters of the RND superfamily
JOF24_RS08430	COG1033	growth of symbiont in host cell
JOF24_RS08435	COG0612	Peptidase, M16
JOF24_RS08440	COG0612	Peptidase, M16
JOF24_RS08445	COG0300	oxidoreductase activity
JOF24_RS08460	COG1426	Protein conserved in bacteria
JOF24_RS08465	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JOF24_RS08480	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JOF24_RS08490	COG1692	metallophosphoesterase
JOF24_RS08495	COG2359	stage V sporulation protein S
JOF24_RS08515	COG4550	Control of competence regulator ComK, YlbF/YmcA
JOF24_RS08535	COG0582	viral genome integration into host DNA
JOF24_RS08585	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JOF24_RS08590	COG3425	synthase
JOF24_RS08595	COG1024	Enoyl-CoA hydratase
JOF24_RS08600	COG1024	Enoyl-CoA hydratase
JOF24_RS08605	COG0318	PFAM AMP-dependent synthetase and ligase
JOF24_RS08605	COG0300	oxidoreductase activity
JOF24_RS08605	COG3321	synthase
JOF24_RS08605	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS08605	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS08610	COG3321	synthase
JOF24_RS08610	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JOF24_RS08610	COG4221	oxidoreductase activity
JOF24_RS08610	COG0300	oxidoreductase activity
JOF24_RS08615	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JOF24_RS08615	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JOF24_RS08615	COG3321	synthase
JOF24_RS08615	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JOF24_RS08615	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS08615	COG3321	synthase
JOF24_RS08615	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JOF24_RS08615	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS08615	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS08615	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS08620	COG3321	synthase
JOF24_RS08620	COG4221	oxidoreductase activity
JOF24_RS08620	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS08620	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS08625	COG3321	synthase
JOF24_RS08625	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JOF24_RS08625	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
JOF24_RS08625	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JOF24_RS08630	COG2124	cytochrome p450
JOF24_RS08635	COG3209	COG3209 Rhs family protein
JOF24_RS08640	COG3619	membrane
JOF24_RS08650	COG1404	Belongs to the peptidase S8 family
JOF24_RS08660	COG4195	phage-related replication protein
JOF24_RS08665	COG1764	response to oxidative stress
JOF24_RS08675	COG2076	Multidrug Resistance protein
JOF24_RS08715	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JOF24_RS08720	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JOF24_RS08725	COG4112	unkown
JOF24_RS08730	COG0860	N-Acetylmuramoyl-L-alanine amidase
JOF24_RS08735	COG0464	growth
JOF24_RS08740	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JOF24_RS08745	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
JOF24_RS08750	COG0789	Transcriptional regulator
JOF24_RS08755	COG0174	glutamine synthetase
JOF24_RS08780	COG2211	Major facilitator Superfamily
JOF24_RS08785	COG3507	Belongs to the glycosyl hydrolase 43 family
JOF24_RS08800	COG1070	Carbohydrate kinase
JOF24_RS08805	COG3848	Pyruvate phosphate dikinase
JOF24_RS08805	COG0574	Belongs to the PEP-utilizing enzyme family
JOF24_RS08825	COG1064	alcohol dehydrogenase
JOF24_RS08840	COG0456	acetyltransferase
JOF24_RS08865	COG3397	chitin binding
JOF24_RS08875	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JOF24_RS08890	COG5434	Belongs to the glycosyl hydrolase 28 family
JOF24_RS08895	COG0756	dUTP diphosphatase activity
JOF24_RS08900	COG4195	phage-related replication protein
JOF24_RS08935	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JOF24_RS08945	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JOF24_RS08965	COG0785	Cytochrome C biogenesis protein
JOF24_RS08970	COG2201	protein-glutamate methylesterase activity
JOF24_RS08975	COG4846	Membrane protein involved in cytochrome C biogenesis
JOF24_RS08985	COG0071	Belongs to the small heat shock protein (HSP20) family
JOF24_RS09000	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JOF24_RS09005	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JOF24_RS09025	COG0824	Thioesterase
JOF24_RS09035	COG4841	protein insertion into membrane
JOF24_RS09045	COG1832	CoA-binding protein
JOF24_RS09050	COG0187	DNA topoisomerase II activity
JOF24_RS09055	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JOF24_RS09065	COG1115	amino acid carrier protein
JOF24_RS09075	COG1063	alcohol dehydrogenase
JOF24_RS09080	COG0800	Aldolase
JOF24_RS09085	COG1312	Catalyzes the dehydration of D-mannonate
JOF24_RS09090	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS09095	COG1609	Transcriptional regulator
JOF24_RS09100	COG2271	Major facilitator Superfamily
JOF24_RS09140	COG0457	Tetratricopeptide repeat
JOF24_RS09170	COG0577	efflux transmembrane transporter activity
JOF24_RS09170	COG1136	(ABC) transporter
JOF24_RS09200	COG2205	protein histidine kinase activity
JOF24_RS09205	COG0745	RESPONSE REGULATOR receiver
JOF24_RS09215	COG3507	Belongs to the glycosyl hydrolase 43 family
JOF24_RS09240	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS09245	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JOF24_RS09250	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JOF24_RS09255	COG2610	gluconate transmembrane transporter activity
JOF24_RS09260	COG2124	cytochrome p450
JOF24_RS09280	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JOF24_RS09290	COG2246	polysaccharide biosynthetic process
JOF24_RS09295	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JOF24_RS09300	COG0586	Pfam SNARE associated Golgi protein
JOF24_RS09305	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JOF24_RS09310	COG1024	Enoyl-CoA hydratase
JOF24_RS09315	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JOF24_RS09320	COG0511	ligase activity, forming carbon-carbon bonds
JOF24_RS09325	COG0439	Biotin carboxylase
JOF24_RS09330	COG0318	PFAM AMP-dependent synthetase and ligase
JOF24_RS09335	COG1960	acyl-CoA dehydrogenase activity
JOF24_RS09340	COG1649	PFAM Uncharacterised BCR, COG1649
JOF24_RS09350	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS09350	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
JOF24_RS09355	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS09360	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS09365	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS09370	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS09375	COG2027	D-alanyl-D-alanine carboxypeptidase
JOF24_RS09380	COG2017	converts alpha-aldose to the beta-anomer
JOF24_RS09385	COG0534	Mate efflux family protein
JOF24_RS09400	COG0582	viral genome integration into host DNA
JOF24_RS09405	COG0166	Belongs to the GPI family
JOF24_RS09410	COG0405	Gamma-glutamyltransferase
JOF24_RS09415	COG2814	Major facilitator Superfamily
JOF24_RS09420	COG0640	Transcriptional regulator
JOF24_RS09425	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JOF24_RS09435	COG0604	alcohol dehydrogenase
JOF24_RS09440	COG0493	'glutamate synthase
JOF24_RS09445	COG0067	glutamate synthase
JOF24_RS09445	COG0069	glutamate synthase activity
JOF24_RS09445	COG0070	glutamate synthase
JOF24_RS09450	COG0583	DNA-binding transcription factor activity
JOF24_RS09455	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JOF24_RS09470	COG0300	oxidoreductase activity
JOF24_RS09475	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
JOF24_RS09485	COG2814	Major facilitator Superfamily
JOF24_RS09490	COG1070	Carbohydrate kinase
JOF24_RS09495	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JOF24_RS09500	COG0243	molybdopterin cofactor binding
JOF24_RS09525	COG5444	nuclease activity
JOF24_RS09530	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JOF24_RS09535	COG2207	Transcriptional regulator
JOF24_RS09535	COG0662	Cupin 2, conserved barrel domain protein
JOF24_RS09540	COG1309	transcriptional regulator
JOF24_RS09545	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JOF24_RS09555	COG0640	Transcriptional regulator
JOF24_RS09560	COG0741	lytic transglycosylase activity
JOF24_RS09565	COG2322	membrane
JOF24_RS09580	COG1619	proteins homologs of microcin C7 resistance protein MccF
JOF24_RS09590	COG1388	LysM domain
JOF24_RS09590	COG3584	3D domain protein
JOF24_RS09595	COG0514	ATP-dependent DNA helicase (RecQ)
JOF24_RS09605	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
JOF24_RS09610	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JOF24_RS09625	COG0071	Belongs to the small heat shock protein (HSP20) family
JOF24_RS09655	COG1012	belongs to the aldehyde dehydrogenase family
JOF24_RS09660	COG1657	PFAM Prenyltransferase squalene oxidase
JOF24_RS09665	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JOF24_RS09670	COG0733	neurotransmitter:sodium symporter activity
JOF24_RS09675	COG0385	Bile acid
JOF24_RS09680	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JOF24_RS09685	COG0508	dehydrogenase complex catalyzes the overall conversion of
JOF24_RS09695	COG4548	von Willebrand factor, type A
JOF24_RS09700	COG0714	Associated with various cellular activities
JOF24_RS09705	COG2032	superoxide dismutase activity
JOF24_RS09710	COG0791	NLP P60 protein
JOF24_RS09710	COG1388	LysM domain
JOF24_RS09715	COG1819	glycosyl
JOF24_RS09720	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JOF24_RS09725	COG0534	Mate efflux family protein
JOF24_RS09730	COG1366	Belongs to the anti-sigma-factor antagonist family
JOF24_RS09735	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JOF24_RS09740	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JOF24_RS09750	COG2962	Rard protein
JOF24_RS09765	COG1942	4-Oxalocrotonate Tautomerase
JOF24_RS09775	COG1733	regulation of RNA biosynthetic process
JOF24_RS09780	COG0778	Nitroreductase
JOF24_RS09785	COG0400	carboxylic ester hydrolase activity
JOF24_RS09790	COG0346	lactoylglutathione lyase activity
JOF24_RS09800	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JOF24_RS09810	COG2723	6-phospho-beta-galactosidase activity
JOF24_RS09815	COG2188	Transcriptional regulator
JOF24_RS09820	COG3409	Peptidoglycan-binding domain 1 protein
JOF24_RS09820	COG0793	Belongs to the peptidase S41A family
JOF24_RS09825	COG2226	methyltransferase
JOF24_RS09835	COG1876	peptidase activity
JOF24_RS09855	COG0671	phosphoesterase, PA-phosphatase related
JOF24_RS09890	COG1509	lysine 2,3-aminomutase activity
JOF24_RS09895	COG0456	acetyltransferase
JOF24_RS09900	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JOF24_RS09905	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JOF24_RS09910	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JOF24_RS09915	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JOF24_RS09920	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
JOF24_RS09930	COG0456	acetyltransferase
JOF24_RS09935	COG0463	Glycosyl transferase, family 2
JOF24_RS09950	COG4641	Protein conserved in bacteria
JOF24_RS09960	COG1086	Polysaccharide biosynthesis protein
JOF24_RS09980	COG1388	LysM domain
JOF24_RS09985	COG0457	Tetratricopeptide repeat
JOF24_RS09995	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JOF24_RS10000	COG3391	amine dehydrogenase activity
JOF24_RS10015	COG5444	nuclease activity
JOF24_RS10020	COG4282	regulation of fungal-type cell wall biogenesis
JOF24_RS10025	COG1525	nuclease
JOF24_RS10030	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JOF24_RS10050	COG1846	Transcriptional regulator
JOF24_RS10055	COG4698	Protein conserved in bacteria
JOF24_RS10060	COG2755	lipolytic protein G-D-S-L family
JOF24_RS10065	COG1999	signal sequence binding
JOF24_RS10075	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JOF24_RS10080	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JOF24_RS10085	COG1272	protein, Hemolysin III
JOF24_RS10090	COG0204	Acyl-transferase
JOF24_RS10095	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JOF24_RS10110	COG2521	methyltransferase
JOF24_RS10110	COG2136	Putative SAM-dependent methyltransferase
JOF24_RS10125	COG1413	lyase activity
JOF24_RS10130	COG1418	mRNA catabolic process
JOF24_RS10135	COG0386	Belongs to the glutathione peroxidase family
JOF24_RS10145	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JOF24_RS10155	COG1278	Cold shock
JOF24_RS10175	COG0328	RNA-DNA hybrid ribonuclease activity
JOF24_RS10180	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
JOF24_RS10185	COG0328	RNA-DNA hybrid ribonuclease activity
JOF24_RS10195	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JOF24_RS10210	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JOF24_RS10220	COG1755	Isoprenylcysteine carboxyl methyltransferase
JOF24_RS10225	COG3424	synthase
JOF24_RS10250	COG1335	isochorismatase
JOF24_RS10280	COG5632	N-Acetylmuramoyl-L-alanine amidase
JOF24_RS10285	COG4824	toxin secretion phage lysis holin
JOF24_RS10305	COG5434	Belongs to the glycosyl hydrolase 28 family
JOF24_RS10310	COG1705	Flagellar rod assembly protein muramidase FlgJ
JOF24_RS10320	COG3953	SLT domain
JOF24_RS10320	COG5280	Phage tail tape measure protein TP901
JOF24_RS10415	COG1595	DNA-templated transcription, initiation
JOF24_RS10445	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
JOF24_RS10450	COG1484	DNA-dependent DNA replication
JOF24_RS10455	COG3935	DnaD domain protein
JOF24_RS10490	COG3646	Phage regulatory protein
JOF24_RS10490	COG3645	SOS response
JOF24_RS10505	COG3620	sequence-specific DNA binding
JOF24_RS10510	COG0582	viral genome integration into host DNA
JOF24_RS10515	COG2233	PERMEase
JOF24_RS10525	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
JOF24_RS10530	COG1199	ATP-dependent helicase activity
JOF24_RS10545	COG0116	Belongs to the methyltransferase superfamily
JOF24_RS10575	COG3359	exonuclease
JOF24_RS10580	COG1205	dead DEAH box helicase
JOF24_RS10580	COG1111	helicase
JOF24_RS10585	COG2190	(PTS) system
JOF24_RS10590	COG0071	Belongs to the small heat shock protein (HSP20) family
JOF24_RS10630	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JOF24_RS10630	COG4499	WXG100 protein secretion system (Wss), protein YukC
JOF24_RS10645	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JOF24_RS10650	COG3935	DnaD domain protein
JOF24_RS10660	COG0436	Aminotransferase
JOF24_RS10665	COG5353	protein conserved in bacteria
JOF24_RS10675	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JOF24_RS10675	COG1199	ATP-dependent helicase activity
JOF24_RS10705	COG0438	transferase activity, transferring glycosyl groups
JOF24_RS10710	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JOF24_RS10725	COG1694	Mazg nucleotide pyrophosphohydrolase
JOF24_RS10730	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JOF24_RS10735	COG2140	Oxalate decarboxylase
JOF24_RS10745	COG4347	Protein of unknown function (DUF1405)
JOF24_RS10750	COG2010	Cytochrome c
JOF24_RS10750	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
JOF24_RS10755	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
JOF24_RS10760	COG0723	plastoquinol--plastocyanin reductase activity
JOF24_RS10775	COG0457	Tetratricopeptide repeat
JOF24_RS10785	COG0287	Prephenate dehydrogenase
JOF24_RS10820	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JOF24_RS10825	COG4401	Chorismate mutase type I
JOF24_RS10840	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
JOF24_RS10845	COG0105	UTP biosynthetic process
JOF24_RS10850	COG0142	geranyltranstransferase activity
JOF24_RS10860	COG0142	geranyltranstransferase activity
JOF24_RS10875	COG0776	regulation of translation
JOF24_RS10880	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JOF24_RS10920	COG0539	negative regulation of cytoplasmic translation
JOF24_RS10935	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
JOF24_RS10940	COG2959	enzyme of heme biosynthesis
JOF24_RS10945	COG3409	Peptidoglycan-binding domain 1 protein
JOF24_RS10945	COG3773	Cell wall hydrolase
JOF24_RS10950	COG2339	peptidase activity
JOF24_RS10955	COG0492	ferredoxin-NADP+ reductase activity
JOF24_RS10960	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JOF24_RS10965	COG4862	establishment of competence for transformation
JOF24_RS10970	COG1408	metallophosphoesterase
JOF24_RS10980	COG1388	LysM domain
JOF24_RS10985	COG1266	CAAX protease self-immunity
JOF24_RS10990	COG0514	ATP-dependent DNA helicase (RecQ)
JOF24_RS10995	COG4955	Helix-turn-helix domain
JOF24_RS11000	COG1141	Ferredoxin
JOF24_RS11005	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JOF24_RS11010	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JOF24_RS11020	COG1595	DNA-templated transcription, initiation
JOF24_RS11025	COG5002	protein histidine kinase activity
JOF24_RS11030	COG0745	RESPONSE REGULATOR receiver
JOF24_RS11035	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JOF24_RS11040	COG1333	cytochrome c biogenesis protein
JOF24_RS11045	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JOF24_RS11050	COG1187	pseudouridine synthase activity
JOF24_RS11055	COG0700	Nucleoside recognition
JOF24_RS11060	COG2715	membrane protein required for spore maturation
JOF24_RS11065	COG1686	Belongs to the peptidase S11 family
JOF24_RS11090	COG1547	Domain of unknown function (DUF309)
JOF24_RS11095	COG0456	acetyltransferase
JOF24_RS11110	COG0307	riboflavin synthase, alpha
JOF24_RS11115	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JOF24_RS11115	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JOF24_RS11125	COG0681	Belongs to the peptidase S26 family
JOF24_RS11135	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JOF24_RS11140	COG4086	secreted protein
JOF24_RS11145	COG0019	diaminopimelate decarboxylase activity
JOF24_RS11150	COG0697	spore germination
JOF24_RS11165	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JOF24_RS11185	COG1191	sigma factor activity
JOF24_RS11195	COG1366	Belongs to the anti-sigma-factor antagonist family
JOF24_RS11200	COG1686	Belongs to the peptidase S11 family
JOF24_RS11205	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
JOF24_RS11210	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
JOF24_RS11215	COG4974	Belongs to the 'phage' integrase family
JOF24_RS11225	COG0735	belongs to the Fur family
JOF24_RS11230	COG1300	Membrane
JOF24_RS11245	COG0281	malic enzyme
JOF24_RS11250	COG1757	Na H antiporter
JOF24_RS11255	COG1027	Aspartate ammonia-lyase
JOF24_RS11260	COG0252	asparaginase activity
JOF24_RS11265	COG1396	sequence-specific DNA binding
JOF24_RS11270	COG1379	DNA repair
JOF24_RS11275	COG0494	nUDIX hydrolase
JOF24_RS11285	COG0667	Aldo Keto reductase
JOF24_RS11295	COG1073	alpha beta
JOF24_RS11305	COG4918	Iron-sulphur cluster biosynthesis
JOF24_RS11310	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JOF24_RS11310	COG0456	acetyltransferase
JOF24_RS11315	COG2329	Antibiotic biosynthesis monooxygenase
JOF24_RS11320	COG0456	acetyltransferase
JOF24_RS11325	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JOF24_RS11340	COG0628	permease
JOF24_RS11350	COG0346	lactoylglutathione lyase activity
JOF24_RS11360	COG3048	D-serine ammonia-lyase activity
JOF24_RS11365	COG0300	oxidoreductase activity
JOF24_RS11370	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JOF24_RS11375	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JOF24_RS11380	COG1024	Enoyl-CoA hydratase
JOF24_RS11385	COG3425	synthase
JOF24_RS11390	COG2124	cytochrome p450
JOF24_RS11395	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS11395	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JOF24_RS11395	COG3321	synthase
JOF24_RS11395	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS11395	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JOF24_RS11400	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JOF24_RS11400	COG3321	synthase
JOF24_RS11400	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS11400	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS11400	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JOF24_RS11405	COG3321	synthase
JOF24_RS11405	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS11405	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS11405	COG0318	PFAM AMP-dependent synthetase and ligase
JOF24_RS11405	COG0300	oxidoreductase activity
JOF24_RS11410	COG0318	PFAM AMP-dependent synthetase and ligase
JOF24_RS11410	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS11410	COG3321	synthase
JOF24_RS11410	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS11410	COG0300	oxidoreductase activity
JOF24_RS11415	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JOF24_RS11415	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS11415	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JOF24_RS11415	COG3321	synthase
JOF24_RS11415	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS11420	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS11420	COG3321	synthase
JOF24_RS11420	COG0300	oxidoreductase activity
JOF24_RS11420	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS11420	COG0318	PFAM AMP-dependent synthetase and ligase
JOF24_RS11425	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JOF24_RS11425	COG3321	synthase
JOF24_RS11425	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JOF24_RS11425	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS11425	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS11430	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS11435	COG0318	PFAM AMP-dependent synthetase and ligase
JOF24_RS11450	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JOF24_RS11450	COG2070	2-Nitropropane dioxygenase
JOF24_RS11455	COG0250	Participates in transcription elongation, termination and antitermination
JOF24_RS11475	COG0596	Alpha beta hydrolase
JOF24_RS11490	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JOF24_RS11495	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JOF24_RS11510	COG0706	membrane insertase activity
JOF24_RS11515	COG2195	Cleaves the N-terminal amino acid of tripeptides
JOF24_RS11520	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JOF24_RS11525	COG0346	lactoylglutathione lyase activity
JOF24_RS11535	COG1376	ErfK ybiS ycfS ynhG family protein
JOF24_RS11540	COG4129	membrane
JOF24_RS11545	COG1126	abc transporter atp-binding protein
JOF24_RS11550	COG0765	amino acid transport
JOF24_RS11555	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JOF24_RS11565	COG1597	lipid kinase activity
JOF24_RS11570	COG0508	dehydrogenase complex catalyzes the overall conversion of
JOF24_RS11575	COG0022	dehydrogenase e1 component
JOF24_RS11580	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JOF24_RS11585	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JOF24_RS11590	COG3426	butyrate kinase activity
JOF24_RS11595	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JOF24_RS11600	COG0280	phosphate acetyltransferase
JOF24_RS11605	COG3290	protein histidine kinase activity
JOF24_RS11605	COG3829	transcription factor binding
JOF24_RS11615	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
JOF24_RS11620	COG2079	MmgE PrpD family protein
JOF24_RS11625	COG0372	Belongs to the citrate synthase family
JOF24_RS11630	COG1960	acyl-CoA dehydrogenase activity
JOF24_RS11635	COG1250	3-hydroxyacyl-CoA dehydrogenase
JOF24_RS11640	COG0183	Belongs to the thiolase family
JOF24_RS11645	COG0584	glycerophosphoryl diester phosphodiesterase
JOF24_RS11650	COG0860	N-Acetylmuramoyl-L-alanine amidase
JOF24_RS11675	COG1902	pentaerythritol trinitrate reductase activity
JOF24_RS11690	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JOF24_RS11695	COG0745	RESPONSE REGULATOR receiver
JOF24_RS11700	COG0750	zinc metalloprotease
JOF24_RS11705	COG0497	DNA recombination
JOF24_RS11715	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
JOF24_RS11725	COG0142	geranyltranstransferase activity
JOF24_RS11735	COG1570	exodeoxyribonuclease VII activity
JOF24_RS11750	COG1302	Protein conserved in bacteria
JOF24_RS11755	COG0439	Biotin carboxylase
JOF24_RS11760	COG0511	ligase activity, forming carbon-carbon bonds
JOF24_RS11800	COG3854	ATPases associated with a variety of cellular activities
JOF24_RS11815	COG0006	proline dipeptidase activity
JOF24_RS11825	COG3872	metal-dependent enzyme
JOF24_RS11835	COG1752	Esterase of the alpha-beta hydrolase superfamily
JOF24_RS11850	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JOF24_RS11870	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JOF24_RS11885	COG1396	sequence-specific DNA binding
JOF24_RS11895	COG0681	Belongs to the peptidase S26 family
JOF24_RS11920	COG4940	Competence protein ComGF
JOF24_RS11930	COG4970	Tfp pilus assembly protein FimT
JOF24_RS11935	COG4537	Required for transformation and DNA binding
JOF24_RS11940	COG1459	type II secretion system
JOF24_RS11945	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JOF24_RS11950	COG0598	Magnesium transport protein CorA
JOF24_RS11955	COG1253	flavin adenine dinucleotide binding
JOF24_RS11960	COG1366	Belongs to the anti-sigma-factor antagonist family
JOF24_RS11970	COG1393	Belongs to the ArsC family
JOF24_RS11980	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JOF24_RS11990	COG0011	TIGRFAM Protein of
JOF24_RS12000	COG2866	Carboxypeptidase
JOF24_RS12005	COG1940	carbohydrate kinase activity
JOF24_RS12010	COG4483	Protein conserved in bacteria
JOF24_RS12015	COG1757	Na H antiporter
JOF24_RS12025	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JOF24_RS12040	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JOF24_RS12045	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JOF24_RS12050	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JOF24_RS12055	COG0581	inorganic phosphate transmembrane transporter activity
JOF24_RS12060	COG0573	inorganic phosphate transmembrane transporter activity
JOF24_RS12065	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JOF24_RS12075	COG0768	penicillin binding
JOF24_RS12080	COG0477	Major facilitator Superfamily
JOF24_RS12085	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JOF24_RS12090	COG2839	Protein conserved in bacteria
JOF24_RS12095	COG5521	maltodextrose utilization protein MalA
JOF24_RS12100	COG1388	LysM domain
JOF24_RS12110	COG4709	membrane
JOF24_RS12115	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
JOF24_RS12120	COG0735	belongs to the Fur family
JOF24_RS12125	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JOF24_RS12140	COG0513	Belongs to the DEAD box helicase family
JOF24_RS12155	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JOF24_RS12160	COG2384	SAM-dependent methyltransferase
JOF24_RS12165	COG2010	Cytochrome c
JOF24_RS12170	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JOF24_RS12175	COG0358	DNA primase activity
JOF24_RS12190	COG0517	IMP dehydrogenase activity
JOF24_RS12195	COG0751	glycine-tRNA ligase activity
JOF24_RS12215	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JOF24_RS12220	COG0295	cytidine deaminase activity
JOF24_RS12225	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
JOF24_RS12235	COG1480	7TM receptor with intracellular HD hydrolase
JOF24_RS12240	COG1702	phosphate starvation-inducible protein PhoH
JOF24_RS12245	COG0561	phosphatase activity
JOF24_RS12260	COG4864	UPF0365 protein
JOF24_RS12265	COG1030	water channel activity
JOF24_RS12270	COG1610	YqeY-like protein
JOF24_RS12280	COG1283	sodium-dependent phosphate transmembrane transporter activity
JOF24_RS12285	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JOF24_RS12290	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JOF24_RS12320	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JOF24_RS12335	COG0860	N-Acetylmuramoyl-L-alanine amidase
JOF24_RS12350	COG1466	dna polymerase III delta subunit
JOF24_RS12365	COG0658	competence protein
JOF24_RS12365	COG2333	competence protein COMEC
JOF24_RS12370	COG2131	deaminase
JOF24_RS12375	COG1555	photosystem II stabilization
JOF24_RS12375	COG1596	polysaccharide export
JOF24_RS12380	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JOF24_RS12385	COG2226	methyltransferase
JOF24_RS12390	COG0799	negative regulation of ribosome biogenesis
JOF24_RS12395	COG1713	HD superfamily hydrolase involved in NAD metabolism
JOF24_RS12405	COG1534	Rna-binding protein
JOF24_RS12410	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JOF24_RS12415	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JOF24_RS12420	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
JOF24_RS12430	COG2755	lipolytic protein G-D-S-L family
JOF24_RS12440	COG0398	Pfam SNARE associated Golgi protein
JOF24_RS12465	COG1794	racemase activity, acting on amino acids and derivatives
JOF24_RS12480	COG0656	L-ascorbic acid biosynthetic process
JOF24_RS12515	COG5002	protein histidine kinase activity
JOF24_RS12515	COG0642	Histidine kinase
JOF24_RS12520	COG0745	RESPONSE REGULATOR receiver
JOF24_RS12525	COG2311	Membrane
JOF24_RS12535	COG0454	-acetyltransferase
JOF24_RS12540	COG0563	adenylate kinase activity
JOF24_RS12560	COG0456	acetyltransferase
JOF24_RS12565	COG2318	DinB family
JOF24_RS12575	COG0561	phosphatase activity
JOF24_RS12580	COG0561	phosphatase activity
JOF24_RS12590	COG1482	cell wall glycoprotein biosynthetic process
JOF24_RS12595	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JOF24_RS12595	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JOF24_RS12595	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JOF24_RS12600	COG3711	transcriptional antiterminator
JOF24_RS12600	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JOF24_RS12610	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JOF24_RS12615	COG0583	DNA-binding transcription factor activity
JOF24_RS12620	COG2814	Major facilitator Superfamily
JOF24_RS12625	COG2124	cytochrome p450
JOF24_RS12625	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JOF24_RS12630	COG1309	transcriptional regulator
JOF24_RS12635	COG2226	methyltransferase
JOF24_RS12650	COG2116	formate transmembrane transporter activity
JOF24_RS12655	COG5609	conserved protein (DUF2294)
JOF24_RS12660	COG3383	formate dehydrogenase (NAD+) activity
JOF24_RS12665	COG2427	Protein of unknown function (DUF1641)
JOF24_RS12675	COG0626	cystathionine gamma-synthase activity
JOF24_RS12680	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JOF24_RS12705	COG0768	penicillin binding
JOF24_RS12720	COG0826	peptidase U32
JOF24_RS12725	COG0826	peptidase U32
JOF24_RS12730	COG4122	O-methyltransferase activity
JOF24_RS12735	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JOF24_RS12750	COG4472	Bacterial protein of unknown function (DUF965)
JOF24_RS12760	COG0628	permease
JOF24_RS12765	COG1126	abc transporter atp-binding protein
JOF24_RS12770	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JOF24_RS12775	COG0765	amino acid transport
JOF24_RS12780	COG0765	amino acid transport
JOF24_RS12795	COG3881	PFAM PRC-barrel domain
JOF24_RS12800	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JOF24_RS12805	COG0457	Tetratricopeptide repeat
JOF24_RS12815	COG1104	cysteine desulfurase activity
JOF24_RS12820	COG1959	2 iron, 2 sulfur cluster binding
JOF24_RS12825	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JOF24_RS12830	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JOF24_RS12855	COG4991	sh3 domain protein
JOF24_RS12855	COG3103	Sh3 type 3 domain protein
JOF24_RS12855	COG0860	N-Acetylmuramoyl-L-alanine amidase
JOF24_RS12865	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JOF24_RS12875	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JOF24_RS12875	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
JOF24_RS12880	COG5416	Lipopolysaccharide assembly protein A domain
JOF24_RS12885	COG0490	domain, Protein
JOF24_RS12890	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JOF24_RS12890	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JOF24_RS12900	COG2244	polysaccharide biosynthetic process
JOF24_RS12905	COG2323	membrane
JOF24_RS12915	COG1862	Preprotein translocase
JOF24_RS12960	COG1388	LysM domain
JOF24_RS12970	COG0157	Belongs to the NadC ModD family
JOF24_RS12975	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
JOF24_RS12980	COG1104	cysteine desulfurase activity
JOF24_RS12985	COG1827	regulation of RNA biosynthetic process
JOF24_RS12990	COG0077	Prephenate dehydratase
JOF24_RS13005	COG3290	protein histidine kinase activity
JOF24_RS13010	COG0211	Belongs to the bacterial ribosomal protein bL27 family
JOF24_RS13015	COG2868	ribosomal protein
JOF24_RS13025	COG1994	Peptidase M50
JOF24_RS13030	COG0739	heme binding
JOF24_RS13035	COG2894	cell division
JOF24_RS13045	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
JOF24_RS13055	COG1077	Cell shape determining protein MreB Mrl
JOF24_RS13075	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
JOF24_RS13080	COG0285	dihydrofolate synthase activity
JOF24_RS13085	COG0525	valine-tRNA ligase activity
JOF24_RS13095	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JOF24_RS13100	COG1388	LysM domain
JOF24_RS13110	COG0113	porphobilinogen synthase activity
JOF24_RS13115	COG1587	Uroporphyrinogen-III synthase
JOF24_RS13125	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JOF24_RS13145	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JOF24_RS13150	COG0470	DNA polymerase III
JOF24_RS13150	COG1067	ATP-dependent peptidase activity
JOF24_RS13165	COG0457	Tetratricopeptide repeat
JOF24_RS13165	COG1477	protein flavinylation
JOF24_RS13180	COG0473	3-isopropylmalate dehydrogenase activity
JOF24_RS13195	COG0440	acetolactate synthase activity
JOF24_RS13200	COG0028	Belongs to the TPP enzyme family
JOF24_RS13220	COG0732	type I restriction modification DNA specificity domain
JOF24_RS13230	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
JOF24_RS13250	COG0622	Phosphoesterase
JOF24_RS13255	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JOF24_RS13265	COG5401	PFAM Sporulation and spore germination
JOF24_RS13275	COG1846	Transcriptional regulator
JOF24_RS13280	COG2197	response regulator
JOF24_RS13285	COG0824	Thioesterase
JOF24_RS13290	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JOF24_RS13295	COG1053	succinate dehydrogenase
JOF24_RS13300	COG2009	succinate dehydrogenase
JOF24_RS13305	COG1719	4-vinyl reductase, 4VR
JOF24_RS13310	COG0527	aspartate kinase activity
JOF24_RS13320	COG3118	belongs to the thioredoxin family
JOF24_RS13325	COG3534	alpha-L-arabinofuranosidase
JOF24_RS13330	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
JOF24_RS13335	COG2086	electron transfer activity
JOF24_RS13340	COG1024	Enoyl-CoA hydratase
JOF24_RS13345	COG1309	transcriptional regulator
JOF24_RS13350	COG0318	PFAM AMP-dependent synthetase and ligase
JOF24_RS13360	COG3766	membrane
JOF24_RS13370	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JOF24_RS13370	COG1796	DNA polymerase
JOF24_RS13375	COG1286	toxin biosynthetic process
JOF24_RS13390	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JOF24_RS13390	COG0072	phenylalanine-tRNA ligase activity
JOF24_RS13395	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JOF24_RS13400	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JOF24_RS13410	COG3835	regulator
JOF24_RS13415	COG0277	FAD linked oxidase domain protein
JOF24_RS13420	COG0247	lactate metabolic process
JOF24_RS13425	COG1966	Carbon starvation protein
JOF24_RS13430	COG3534	alpha-L-arabinofuranosidase
JOF24_RS13435	COG0395	ABC-type sugar transport system, permease component
JOF24_RS13440	COG1175	transmembrane transport
JOF24_RS13445	COG1653	transport
JOF24_RS13455	COG0647	UMP catabolic process
JOF24_RS13460	COG0235	Class ii aldolase
JOF24_RS13465	COG1069	ribulokinase activity
JOF24_RS13470	COG2160	L-arabinose isomerase activity
JOF24_RS13475	COG3507	Belongs to the glycosyl hydrolase 43 family
JOF24_RS13480	COG1363	Peptidase, m42
JOF24_RS13490	COG3326	Membrane
JOF24_RS13495	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JOF24_RS13505	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JOF24_RS13510	COG1346	cytolysis
JOF24_RS13515	COG1380	Effector of murein hydrolase LrgA
JOF24_RS13520	COG3279	Response regulator of the LytR AlgR family
JOF24_RS13525	COG3275	phosphorelay sensor kinase activity
JOF24_RS13530	COG1011	Hydrolase
JOF24_RS13545	COG0398	Pfam SNARE associated Golgi protein
JOF24_RS13550	COG1484	DNA-dependent DNA replication
JOF24_RS13555	COG3611	Membrane attachment protein
JOF24_RS13570	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JOF24_RS13575	COG1733	regulation of RNA biosynthetic process
JOF24_RS13580	COG2814	Major facilitator Superfamily
JOF24_RS13585	COG0656	L-ascorbic acid biosynthetic process
JOF24_RS13590	COG0237	dephospho-CoA kinase activity
JOF24_RS13595	COG1971	Probably functions as a manganese efflux pump
JOF24_RS13600	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
JOF24_RS13605	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JOF24_RS13605	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JOF24_RS13610	COG5002	protein histidine kinase activity
JOF24_RS13615	COG0745	RESPONSE REGULATOR receiver
JOF24_RS13625	COG0538	isocitrate dehydrogenase activity
JOF24_RS13630	COG0372	Belongs to the citrate synthase family
JOF24_RS13645	COG0628	permease
JOF24_RS13650	COG3030	protein affecting phage T7 exclusion by the F plasmid
JOF24_RS13655	COG0469	pyruvate kinase activity
JOF24_RS13675	COG0281	malic enzyme
JOF24_RS13680	COG0587	DNA-directed DNA polymerase activity
JOF24_RS13700	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
JOF24_RS13710	COG4109	DRTGG domain
JOF24_RS13720	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS13735	COG0521	Mo-molybdopterin cofactor biosynthetic process
JOF24_RS13745	COG0827	DNA restriction-modification system
JOF24_RS13750	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
JOF24_RS13755	COG3874	Sporulation protein YtfJ
JOF24_RS13765	COG1714	RDD family
JOF24_RS13770	COG0616	signal peptide processing
JOF24_RS13775	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JOF24_RS13780	COG1574	metal-dependent hydrolase with the TIM-barrel fold
JOF24_RS13785	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JOF24_RS13800	COG1104	cysteine desulfurase activity
JOF24_RS13805	COG1114	Component of the transport system for branched-chain amino acids
JOF24_RS13815	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JOF24_RS13820	COG1309	transcriptional regulator
JOF24_RS13825	COG1956	GAF domain-containing protein
JOF24_RS13830	COG2203	Gaf domain
JOF24_RS13830	COG2199	diguanylate cyclase activity
JOF24_RS13840	COG1012	belongs to the aldehyde dehydrogenase family
JOF24_RS13845	COG4282	regulation of fungal-type cell wall biogenesis
JOF24_RS13850	COG1017	nitric oxide dioxygenase activity
JOF24_RS13850	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JOF24_RS13860	COG0693	protein deglycase activity
JOF24_RS13875	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JOF24_RS13880	COG1378	Sugar-specific transcriptional regulator TrmB
JOF24_RS13885	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
JOF24_RS13900	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JOF24_RS13905	COG0454	-acetyltransferase
JOF24_RS13910	COG0517	IMP dehydrogenase activity
JOF24_RS13915	COG0123	including yeast histone deacetylase and acetoin utilization protein
JOF24_RS13920	COG1360	Flagellar Motor Protein
JOF24_RS13925	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JOF24_RS13930	COG1609	Transcriptional regulator
JOF24_RS13935	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
JOF24_RS13935	COG1605	Chorismate mutase
JOF24_RS13940	COG3118	belongs to the thioredoxin family
JOF24_RS13945	COG4980	gas vesicle protein
JOF24_RS13950	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
JOF24_RS13960	COG1674	ftsk spoiiie
JOF24_RS13965	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JOF24_RS13975	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JOF24_RS13985	COG1363	Peptidase, m42
JOF24_RS13990	COG5584	Small secreted protein
JOF24_RS13995	COG0281	malic enzyme
JOF24_RS14000	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JOF24_RS14015	COG0510	thiamine kinase activity
JOF24_RS14020	COG1597	lipid kinase activity
JOF24_RS14030	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
JOF24_RS14035	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JOF24_RS14040	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JOF24_RS14045	COG2252	PERMEase
JOF24_RS14050	COG4473	ABC transporter
JOF24_RS14055	COG1131	(ABC) transporter
JOF24_RS14060	COG1349	DNA-binding transcription factor activity
JOF24_RS14065	COG1187	pseudouridine synthase activity
JOF24_RS14070	COG2244	polysaccharide biosynthetic process
JOF24_RS14075	COG2081	HI0933 family
JOF24_RS14080	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JOF24_RS14090	COG1609	Transcriptional regulator
JOF24_RS14095	COG1653	transport
JOF24_RS14100	COG1175	transmembrane transport
JOF24_RS14105	COG0395	ABC-type sugar transport system, permease component
JOF24_RS14110	COG1486	melibiose metabolic process
JOF24_RS14120	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JOF24_RS14135	COG1366	Belongs to the anti-sigma-factor antagonist family
JOF24_RS14135	COG2202	Pas domain
JOF24_RS14140	COG2814	Major facilitator Superfamily
JOF24_RS14145	COG5522	Integral membrane protein (intg_mem_TP0381)
JOF24_RS14150	COG0577	efflux transmembrane transporter activity
JOF24_RS14155	COG1136	(ABC) transporter
JOF24_RS14160	COG2205	protein histidine kinase activity
JOF24_RS14165	COG0745	RESPONSE REGULATOR receiver
JOF24_RS14170	COG0577	efflux transmembrane transporter activity
JOF24_RS14175	COG1136	(ABC) transporter
JOF24_RS14195	COG1131	(ABC) transporter
JOF24_RS14200	COG1725	Transcriptional regulator
JOF24_RS14210	COG0640	Transcriptional regulator
JOF24_RS14215	COG0477	Major facilitator Superfamily
JOF24_RS14220	COG1242	4 iron, 4 sulfur cluster binding
JOF24_RS14225	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
JOF24_RS14235	COG0584	glycerophosphoryl diester phosphodiesterase
JOF24_RS14245	COG2267	carboxylic ester hydrolase activity
JOF24_RS14250	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JOF24_RS14255	COG1113	amino acid transport
JOF24_RS14260	COG0367	asparagine synthase
JOF24_RS14280	COG1506	peptidase
JOF24_RS14285	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JOF24_RS14290	COG1116	anion transmembrane transporter activity
JOF24_RS14295	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JOF24_RS14300	COG0494	nUDIX hydrolase
JOF24_RS14305	COG4824	toxin secretion phage lysis holin
JOF24_RS14310	COG0783	Belongs to the Dps family
JOF24_RS14335	COG0288	reversible hydration of carbon dioxide
JOF24_RS14345	COG1271	oxidase subunit
JOF24_RS14350	COG1294	oxidase, subunit
JOF24_RS14365	COG4948	Mandelate Racemase Muconate Lactonizing
JOF24_RS14375	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
JOF24_RS14380	COG0596	Alpha beta hydrolase
JOF24_RS14390	COG1169	isochorismate synthase
JOF24_RS14395	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JOF24_RS14400	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
JOF24_RS14525	COG3859	Proton-coupled thiamine transporter YuaJ
JOF24_RS14530	COG2268	Band 7 protein
JOF24_RS14535	COG1585	Membrane protein implicated in regulation of membrane protease activity
JOF24_RS14540	COG2318	DinB family
JOF24_RS14550	COG1454	alcohol dehydrogenase
JOF24_RS14555	COG1012	belongs to the aldehyde dehydrogenase family
JOF24_RS14560	COG1510	regulation of RNA biosynthetic process
JOF24_RS14570	COG0569	domain protein
JOF24_RS14575	COG1705	Flagellar rod assembly protein muramidase FlgJ
JOF24_RS14585	COG1017	nitric oxide dioxygenase activity
JOF24_RS14585	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JOF24_RS14610	COG0628	permease
JOF24_RS14615	COG0673	inositol 2-dehydrogenase activity
JOF24_RS14620	COG0693	protein deglycase activity
JOF24_RS14625	COG0840	transmembrane signaling receptor activity
JOF24_RS14630	COG0840	transmembrane signaling receptor activity
JOF24_RS14635	COG0840	transmembrane signaling receptor activity
JOF24_RS14640	COG0840	transmembrane signaling receptor activity
JOF24_RS14655	COG2070	2-Nitropropane dioxygenase
JOF24_RS14660	COG0432	Pfam Uncharacterised protein family UPF0047
JOF24_RS14665	COG0366	Alpha amylase catalytic
JOF24_RS14670	COG1253	flavin adenine dinucleotide binding
JOF24_RS14675	COG2738	Putative neutral zinc metallopeptidase
JOF24_RS14690	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JOF24_RS14715	COG1335	isochorismatase
JOF24_RS14720	COG1979	alcohol dehydrogenase
JOF24_RS14725	COG1979	alcohol dehydrogenase
JOF24_RS14730	COG2155	Conserved Protein
JOF24_RS14735	COG1098	S1 RNA binding domain
JOF24_RS14740	COG0436	Aminotransferase
JOF24_RS14745	COG1522	sequence-specific DNA binding
JOF24_RS14750	COG2267	carboxylic ester hydrolase activity
JOF24_RS14760	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JOF24_RS14765	COG2205	protein histidine kinase activity
JOF24_RS14775	COG5018	Exonuclease
JOF24_RS14780	COG2814	Major facilitator Superfamily
JOF24_RS14785	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JOF24_RS14790	COG3011	Protein conserved in bacteria
JOF24_RS14800	COG3290	protein histidine kinase activity
JOF24_RS14805	COG4565	transcriptional regulatory protein
JOF24_RS14810	COG1744	ABC transporter substrate-binding protein PnrA-like
JOF24_RS14815	COG3845	ABC transporter
JOF24_RS14820	COG4603	Belongs to the binding-protein-dependent transport system permease family
JOF24_RS14825	COG1079	Belongs to the binding-protein-dependent transport system permease family
JOF24_RS14835	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JOF24_RS14835	COG2111	Na H antiporter
JOF24_RS14840	COG2111	Na H antiporter
JOF24_RS14845	COG1006	Multisubunit Na H antiporter MnhC subunit
JOF24_RS14850	COG0651	ATP synthesis coupled electron transport
JOF24_RS14855	COG1863	multisubunit Na H antiporter MnhE subunit
JOF24_RS14860	COG2212	antiporter activity
JOF24_RS14865	COG1320	monovalent cation:proton antiporter activity
JOF24_RS14870	COG2050	protein possibly involved in aromatic compounds catabolism
JOF24_RS14875	COG2197	response regulator
JOF24_RS14890	COG0142	geranyltranstransferase activity
JOF24_RS14905	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
JOF24_RS14910	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JOF24_RS14915	COG1335	isochorismatase
JOF24_RS14920	COG5506	Protein of unknown function (DUF1694)
JOF24_RS14935	COG0628	permease
JOF24_RS14945	COG1418	mRNA catabolic process
JOF24_RS14950	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS14960	COG1511	domain protein
JOF24_RS14965	COG0433	COG0433 Predicted ATPase
JOF24_RS14965	COG1674	ftsk spoiiie
JOF24_RS14970	COG4499	WXG100 protein secretion system (Wss), protein YukC
JOF24_RS14975	COG5417	Belongs to the EsaB family
JOF24_RS14980	COG4842	Belongs to the WXG100 family
JOF24_RS14985	COG2508	Transcriptional regulator
JOF24_RS14985	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
JOF24_RS14990	COG0686	Belongs to the AlaDH PNT family
JOF24_RS14995	COG5634	Uncharacterized conserved protein (DUF2278)
JOF24_RS15000	COG3251	PFAM MbtH domain protein
JOF24_RS15005	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JOF24_RS15010	COG3433	isochorismatase activity
JOF24_RS15010	COG1535	isochorismatase
JOF24_RS15015	COG1021	2,3-dihydroxybenzoate-AMP ligase
JOF24_RS15020	COG1169	isochorismate synthase
JOF24_RS15025	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS15030	COG2819	hydrolase of the alpha beta superfamily
JOF24_RS15035	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JOF24_RS15040	COG1268	BioY protein
JOF24_RS15045	COG2056	Na+-H+ antiporter family
JOF24_RS15055	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
JOF24_RS15060	COG3584	3D domain protein
JOF24_RS15075	COG1252	NADH dehydrogenase
JOF24_RS15105	COG1131	(ABC) transporter
JOF24_RS15125	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JOF24_RS15130	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
JOF24_RS15135	COG0316	Belongs to the HesB IscA family
JOF24_RS15145	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JOF24_RS15155	COG1252	NADH dehydrogenase
JOF24_RS15160	COG4837	Protein of unknown function (DUF1462)
JOF24_RS15165	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
JOF24_RS15170	COG0823	Involved in the tonB-independent uptake of proteins
JOF24_RS15170	COG4946	Tricorn protease homolog
JOF24_RS15170	COG1506	peptidase
JOF24_RS15180	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
JOF24_RS15185	COG0460	homoserine dehydrogenase
JOF24_RS15190	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JOF24_RS15195	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JOF24_RS15200	COG0647	UMP catabolic process
JOF24_RS15205	COG2445	Protein of unknown function DUF86
JOF24_RS15210	COG4470	Protein conserved in bacteria
JOF24_RS15220	COG0739	heme binding
JOF24_RS15230	COG0737	Belongs to the 5'-nucleotidase family
JOF24_RS15235	COG0730	response to heat
JOF24_RS15240	COG1801	Protein of unknown function DUF72
JOF24_RS15255	COG2508	Transcriptional regulator
JOF24_RS15260	COG0457	Tetratricopeptide repeat
JOF24_RS15270	COG2814	Major facilitator Superfamily
JOF24_RS15275	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JOF24_RS15280	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JOF24_RS15285	COG2356	endonuclease I
JOF24_RS15290	COG3842	ATPase activity
JOF24_RS15295	COG2188	Transcriptional regulator
JOF24_RS15300	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JOF24_RS15305	COG0395	ABC-type sugar transport system, permease component
JOF24_RS15310	COG1175	transmembrane transport
JOF24_RS15315	COG1653	transport
JOF24_RS15320	COG2222	sugar isomerase
JOF24_RS15325	COG0789	Transcriptional regulator
JOF24_RS15340	COG0322	excinuclease ABC activity
JOF24_RS15345	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JOF24_RS15350	COG2226	methyltransferase
JOF24_RS15360	COG3409	Peptidoglycan-binding domain 1 protein
JOF24_RS15365	COG0719	Fe-S assembly protein
JOF24_RS15370	COG0822	iron-sulfur transferase activity
JOF24_RS15375	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JOF24_RS15380	COG0719	Fe-S assembly protein
JOF24_RS15385	COG0396	ATPase activity
JOF24_RS15395	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JOF24_RS15400	COG1464	Belongs to the NlpA lipoprotein family
JOF24_RS15405	COG2011	ABC-type metal ion transport system permease component
JOF24_RS15410	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JOF24_RS15420	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JOF24_RS15425	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JOF24_RS15440	COG1393	Belongs to the ArsC family
JOF24_RS15445	COG1960	acyl-CoA dehydrogenase activity
JOF24_RS15450	COG0183	Belongs to the thiolase family
JOF24_RS15455	COG1024	Enoyl-CoA hydratase
JOF24_RS15455	COG1250	3-hydroxyacyl-CoA dehydrogenase
JOF24_RS15475	COG5577	PFAM Coat F domain
JOF24_RS15480	COG1846	Transcriptional regulator
JOF24_RS15485	COG0477	Major facilitator Superfamily
JOF24_RS15490	COG1942	4-Oxalocrotonate Tautomerase
JOF24_RS15495	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS15500	COG0583	DNA-binding transcription factor activity
JOF24_RS15510	COG0583	DNA-binding transcription factor activity
JOF24_RS15530	COG1120	ATPase activity
JOF24_RS15545	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS15550	COG0783	Belongs to the Dps family
JOF24_RS15555	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JOF24_RS15560	COG0745	RESPONSE REGULATOR receiver
JOF24_RS15565	COG2770	Histidine kinase
JOF24_RS15565	COG2205	protein histidine kinase activity
JOF24_RS15575	COG1309	transcriptional regulator
JOF24_RS15580	COG0114	fumarate hydratase activity
JOF24_RS15590	COG0697	spore germination
JOF24_RS15595	COG0814	amino acid
JOF24_RS15605	COG2197	response regulator
JOF24_RS15610	COG4585	Histidine kinase
JOF24_RS15615	COG4758	membrane
JOF24_RS15620	COG3595	metallopeptidase activity
JOF24_RS15625	COG1842	Phage shock protein A
JOF24_RS15630	COG4758	membrane
JOF24_RS15635	COG2814	Major facilitator Superfamily
JOF24_RS15640	COG2096	Adenosyltransferase
JOF24_RS15645	COG1120	ATPase activity
JOF24_RS15650	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JOF24_RS15655	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JOF24_RS15660	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS15665	COG3386	PFAM SMP-30 Gluconolaconase
JOF24_RS15670	COG2205	protein histidine kinase activity
JOF24_RS15675	COG0745	RESPONSE REGULATOR receiver
JOF24_RS15685	COG1191	sigma factor activity
JOF24_RS15695	COG2140	Oxalate decarboxylase
JOF24_RS15710	COG1120	ATPase activity
JOF24_RS15715	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JOF24_RS15720	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JOF24_RS15725	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JOF24_RS15730	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
JOF24_RS15735	COG0531	amino acid
JOF24_RS15745	COG1988	membrane-bound metal-dependent
JOF24_RS15750	COG1368	sulfuric ester hydrolase activity
JOF24_RS15755	COG1910	domain protein
JOF24_RS15760	COG0725	ABC transporter, periplasmic molybdate-binding protein
JOF24_RS15765	COG4149	molybdate abc transporter
JOF24_RS15770	COG2197	response regulator
JOF24_RS15775	COG3850	Histidine kinase
JOF24_RS15780	COG1131	(ABC) transporter
JOF24_RS15790	COG0842	Transport permease protein
JOF24_RS15795	COG0656	L-ascorbic acid biosynthetic process
JOF24_RS15815	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JOF24_RS15820	COG3973	AAA domain
JOF24_RS15825	COG2860	membrane
JOF24_RS15835	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
JOF24_RS15840	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JOF24_RS15845	COG2217	Heavy metal translocating P-type atpase
JOF24_RS15850	COG2217	Heavy metal translocating P-type atpase
JOF24_RS15855	COG2608	mercury ion transmembrane transporter activity
JOF24_RS15860	COG1937	Protein conserved in bacteria
JOF24_RS15865	COG0673	inositol 2-dehydrogenase activity
JOF24_RS15875	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JOF24_RS15880	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JOF24_RS15885	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JOF24_RS15890	COG1126	abc transporter atp-binding protein
JOF24_RS15895	COG0765	amino acid transport
JOF24_RS15900	COG0765	amino acid transport
JOF24_RS15905	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JOF24_RS15910	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JOF24_RS15915	COG0454	-acetyltransferase
JOF24_RS15920	COG0583	DNA-binding transcription factor activity
JOF24_RS15925	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS15930	COG2732	(Barnase) inhibitor
JOF24_RS15935	COG2732	(Barnase) inhibitor
JOF24_RS15950	COG0557	exoribonuclease II activity
JOF24_RS15955	COG1647	Serine aminopeptidase, S33
JOF24_RS15960	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JOF24_RS15965	COG1476	TRANSCRIPTIONal
JOF24_RS15970	COG1396	sequence-specific DNA binding
JOF24_RS15975	COG1396	sequence-specific DNA binding
JOF24_RS15980	COG1733	regulation of RNA biosynthetic process
JOF24_RS16005	COG1131	(ABC) transporter
JOF24_RS16010	COG1174	glycine betaine transport
JOF24_RS16015	COG1732	Glycine betaine
JOF24_RS16020	COG1174	glycine betaine transport
JOF24_RS16025	COG1125	glycine betaine transport
JOF24_RS16025	COG0517	IMP dehydrogenase activity
JOF24_RS16030	COG1510	regulation of RNA biosynthetic process
JOF24_RS16035	COG1174	glycine betaine transport
JOF24_RS16040	COG1732	Glycine betaine
JOF24_RS16045	COG1174	glycine betaine transport
JOF24_RS16050	COG0517	IMP dehydrogenase activity
JOF24_RS16050	COG1125	glycine betaine transport
JOF24_RS16055	COG1510	regulation of RNA biosynthetic process
JOF24_RS16060	COG2095	MarC family integral membrane protein
JOF24_RS16065	COG3064	Membrane
JOF24_RS16070	COG4640	response to antibiotic
JOF24_RS16075	COG0456	acetyltransferase
JOF24_RS16090	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JOF24_RS16105	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JOF24_RS16110	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JOF24_RS16115	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JOF24_RS16125	COG2234	aminopeptidase activity
JOF24_RS16145	COG0126	phosphoglycerate kinase activity
JOF24_RS16150	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JOF24_RS16155	COG2390	Transcriptional regulator
JOF24_RS16160	COG2814	Major facilitator Superfamily
JOF24_RS16165	COG1609	Transcriptional regulator
JOF24_RS16175	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JOF24_RS16180	COG0583	DNA-binding transcription factor activity
JOF24_RS16185	COG0697	spore germination
JOF24_RS16190	COG1113	amino acid transport
JOF24_RS16200	COG1609	Transcriptional regulator
JOF24_RS16210	COG0561	phosphatase activity
JOF24_RS16215	COG1737	Transcriptional regulator
JOF24_RS16220	COG1070	Carbohydrate kinase
JOF24_RS16245	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JOF24_RS16250	COG2186	Transcriptional regulator
JOF24_RS16260	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
JOF24_RS16270	COG5039	Polysaccharide pyruvyl transferase
JOF24_RS16275	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JOF24_RS16280	COG0110	maltose O-acetyltransferase activity
JOF24_RS16285	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JOF24_RS16290	COG2244	polysaccharide biosynthetic process
JOF24_RS16295	COG1216	Glycosyl transferase, family 2
JOF24_RS16300	COG5039	Polysaccharide pyruvyl transferase
JOF24_RS16305	COG1216	Glycosyl transferase, family 2
JOF24_RS16315	COG0438	transferase activity, transferring glycosyl groups
JOF24_RS16320	COG1215	transferase activity, transferring glycosyl groups
JOF24_RS16325	COG0438	transferase activity, transferring glycosyl groups
JOF24_RS16330	COG1086	Polysaccharide biosynthesis protein
JOF24_RS16335	COG0489	protein tyrosine kinase activity
JOF24_RS16340	COG3944	biosynthesis protein
JOF24_RS16345	COG1396	sequence-specific DNA binding
JOF24_RS16350	COG2272	Belongs to the type-B carboxylesterase lipase family
JOF24_RS16355	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JOF24_RS16360	COG2364	Membrane
JOF24_RS16365	COG0456	acetyltransferase
JOF24_RS16370	COG3479	Phenolic acid decarboxylase
JOF24_RS16440	COG2211	Major facilitator Superfamily
JOF24_RS16445	COG1609	Transcriptional regulator
JOF24_RS16455	COG0583	DNA-binding transcription factor activity
JOF24_RS16460	COG2828	Protein conserved in bacteria
JOF24_RS16465	COG0477	Major facilitator Superfamily
JOF24_RS16465	COG2814	Major facilitator Superfamily
JOF24_RS16470	COG1611	Belongs to the LOG family
JOF24_RS16475	COG1694	Mazg nucleotide pyrophosphohydrolase
JOF24_RS16480	COG0659	secondary active sulfate transmembrane transporter activity
JOF24_RS16485	COG0288	reversible hydration of carbon dioxide
JOF24_RS16490	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JOF24_RS16495	COG4290	ribonuclease
JOF24_RS16500	COG2162	N-hydroxyarylamine O-acetyltransferase activity
JOF24_RS16505	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JOF24_RS16515	COG0391	Required for morphogenesis under gluconeogenic growth conditions
JOF24_RS16525	COG1051	belongs to the nudix hydrolase family
JOF24_RS16530	COG0492	ferredoxin-NADP+ reductase activity
JOF24_RS16535	COG3883	PFAM NLP P60 protein
JOF24_RS16535	COG0791	NLP P60 protein
JOF24_RS16540	COG0457	Tetratricopeptide repeat
JOF24_RS16545	COG5002	protein histidine kinase activity
JOF24_RS16550	COG0745	RESPONSE REGULATOR receiver
JOF24_RS16560	COG1132	(ABC) transporter
JOF24_RS16565	COG0140	phosphoribosyl-ATP diphosphatase activity
JOF24_RS16565	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JOF24_RS16590	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JOF24_RS16605	COG4990	cell redox homeostasis
JOF24_RS16610	COG0110	maltose O-acetyltransferase activity
JOF24_RS16630	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JOF24_RS16640	COG2188	Transcriptional regulator
JOF24_RS16645	COG1309	transcriptional regulator
JOF24_RS16650	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
JOF24_RS16655	COG1950	PFAM Membrane protein of
JOF24_RS16660	COG1983	PspC domain protein
JOF24_RS16665	COG3595	metallopeptidase activity
JOF24_RS16680	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JOF24_RS16690	COG4897	Protein conserved in bacteria
JOF24_RS16695	COG3848	Pyruvate phosphate dikinase
JOF24_RS16695	COG0574	Belongs to the PEP-utilizing enzyme family
JOF24_RS16700	COG1309	transcriptional regulator
JOF24_RS16705	COG2814	Major facilitator Superfamily
JOF24_RS16750	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JOF24_RS16760	COG0793	Belongs to the peptidase S41A family
JOF24_RS16760	COG3409	Peptidoglycan-binding domain 1 protein
JOF24_RS16765	COG3420	alginic acid biosynthetic process
JOF24_RS16770	COG2177	Part of the ABC transporter FtsEX involved in
JOF24_RS16775	COG2884	Cell division ATP-binding protein ftsE
JOF24_RS16780	COG2010	Cytochrome c
JOF24_RS16785	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JOF24_RS16800	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JOF24_RS16815	COG1516	flagellar protein fliS
JOF24_RS16820	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
JOF24_RS16825	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JOF24_RS16845	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JOF24_RS16850	COG1256	bacterial-type flagellum assembly
JOF24_RS16850	COG4786	Flagellar basal body rod
JOF24_RS16855	COG3418	PFAM FlgN family protein
JOF24_RS16860	COG2747	anti-sigma28 factor FlgM
JOF24_RS16870	COG1040	competence protein
JOF24_RS16880	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
JOF24_RS16885	COG1307	EDD domain protein, DegV family
JOF24_RS16890	COG2197	response regulator
JOF24_RS16895	COG4585	Histidine kinase
JOF24_RS16900	COG1739	Uncharacterized protein family UPF0029
JOF24_RS16905	COG1316	TRANSCRIPTIONal
JOF24_RS16910	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JOF24_RS16915	COG0438	transferase activity, transferring glycosyl groups
JOF24_RS16920	COG1215	transferase activity, transferring glycosyl groups
JOF24_RS16925	COG3206	protein involved in exopolysaccharide biosynthesis
JOF24_RS16930	COG3307	-O-antigen
JOF24_RS16935	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
JOF24_RS16940	COG0297	glycogen (starch) synthase activity
JOF24_RS16940	COG0438	transferase activity, transferring glycosyl groups
JOF24_RS16945	COG2244	polysaccharide biosynthetic process
JOF24_RS16955	COG0860	N-Acetylmuramoyl-L-alanine amidase
JOF24_RS16955	COG2247	cell wall binding repeat
JOF24_RS16960	COG2385	sporulation resulting in formation of a cellular spore
JOF24_RS16960	COG2247	cell wall binding repeat
JOF24_RS16970	COG1316	TRANSCRIPTIONal
JOF24_RS16975	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
JOF24_RS16980	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JOF24_RS16985	COG1134	teichoic acid transport
JOF24_RS16990	COG1682	transport, permease protein
JOF24_RS16995	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JOF24_RS17005	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
JOF24_RS17010	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
JOF24_RS17015	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JOF24_RS17020	COG4193	domain, Protein
JOF24_RS17025	COG1482	cell wall glycoprotein biosynthetic process
JOF24_RS17030	COG0697	spore germination
JOF24_RS17035	COG0814	amino acid
JOF24_RS17045	COG1215	transferase activity, transferring glycosyl groups
JOF24_RS17050	COG2814	Major facilitator Superfamily
JOF24_RS17055	COG1316	TRANSCRIPTIONal
JOF24_RS17060	COG0561	phosphatase activity
JOF24_RS17065	COG2433	Pfam Transposase IS66
JOF24_RS17070	COG0791	NLP P60 protein
JOF24_RS17080	COG2843	Capsule synthesis protein
JOF24_RS17090	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JOF24_RS17095	COG0697	spore germination
JOF24_RS17100	COG0814	amino acid
JOF24_RS17110	COG1609	Transcriptional regulator
JOF24_RS17115	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JOF24_RS17125	COG1129	ABC transporter
JOF24_RS17130	COG1172	Belongs to the binding-protein-dependent transport system permease family
JOF24_RS17135	COG1879	ABC-type sugar transport system periplasmic component
JOF24_RS17140	COG3103	Sh3 type 3 domain protein
JOF24_RS17145	COG2249	NAD(P)H dehydrogenase (quinone) activity
JOF24_RS17150	COG3527	Alpha-acetolactate decarboxylase
JOF24_RS17155	COG0028	Belongs to the TPP enzyme family
JOF24_RS17160	COG0583	DNA-binding transcription factor activity
JOF24_RS17165	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JOF24_RS17180	COG5337	Spore coat protein CotH
JOF24_RS17190	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JOF24_RS17200	COG0405	Gamma-glutamyltransferase
JOF24_RS17205	COG1522	sequence-specific DNA binding
JOF24_RS17210	COG2059	Chromate
JOF24_RS17215	COG2059	Chromate
JOF24_RS17240	COG5444	nuclease activity
JOF24_RS17255	COG3878	Protein conserved in bacteria
JOF24_RS17260	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
JOF24_RS17265	COG4464	protein tyrosine phosphatase activity
JOF24_RS17270	COG0489	protein tyrosine kinase activity
JOF24_RS17275	COG3944	biosynthesis protein
JOF24_RS17285	COG4715	Zinc finger, swim domain protein
JOF24_RS17290	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JOF24_RS17295	COG0561	phosphatase activity
JOF24_RS17300	COG1349	DNA-binding transcription factor activity
JOF24_RS17305	COG0629	single-stranded DNA binding
JOF24_RS17330	COG0457	Tetratricopeptide repeat
JOF24_RS17335	COG4786	Flagellar basal body rod
JOF24_RS17340	COG4786	Flagellar basal body rod
JOF24_RS17345	COG1077	Cell shape determining protein MreB Mrl
JOF24_RS17350	COG1609	Transcriptional regulator
JOF24_RS17355	COG1846	Transcriptional regulator
JOF24_RS17360	COG2814	Major facilitator Superfamily
JOF24_RS17365	COG1953	Uracil, thiamine, allantoin
JOF24_RS17370	COG0477	Major facilitator Superfamily
JOF24_RS17375	COG1335	isochorismatase
JOF24_RS17380	COG0004	ammonium transporteR
JOF24_RS17385	COG0347	Belongs to the P(II) protein family
JOF24_RS17390	COG0772	Belongs to the SEDS family
JOF24_RS17395	COG0671	phosphoesterase, PA-phosphatase related
JOF24_RS17405	COG0739	heme binding
JOF24_RS17410	COG1247	-acetyltransferase
JOF24_RS17425	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JOF24_RS17440	COG0726	polysaccharide deacetylase
JOF24_RS17445	COG1959	2 iron, 2 sulfur cluster binding
JOF24_RS17460	COG0831	urea catabolic process
JOF24_RS17470	COG1994	Peptidase M50
JOF24_RS17475	COG0457	Tetratricopeptide repeat
JOF24_RS17485	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
JOF24_RS17495	COG2304	oxidoreductase activity
JOF24_RS17500	COG2304	oxidoreductase activity
JOF24_RS17505	COG2385	sporulation resulting in formation of a cellular spore
JOF24_RS17510	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JOF24_RS17520	COG4836	Membrane
JOF24_RS17590	COG0698	ribose 5-phosphate isomerase
JOF24_RS17595	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JOF24_RS17605	COG0009	L-threonylcarbamoyladenylate synthase
JOF24_RS17610	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
JOF24_RS17630	COG2890	protein-(glutamine-N5) methyltransferase activity
JOF24_RS17635	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JOF24_RS17640	COG0346	lactoylglutathione lyase activity
JOF24_RS17645	COG0789	Transcriptional regulator
JOF24_RS17650	COG0679	Auxin Efflux Carrier
JOF24_RS17655	COG0281	malic enzyme
JOF24_RS17670	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JOF24_RS17675	COG1494	fructose-1,6-bisphosphatase
JOF24_RS17680	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JOF24_RS17690	COG0191	fructose-bisphosphate aldolase activity
JOF24_RS17695	COG2204	response regulator
JOF24_RS17700	COG4821	SIS domain
JOF24_RS17715	COG2181	nitrate reductase activity
JOF24_RS17715	COG0247	lactate metabolic process
JOF24_RS17720	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JOF24_RS17735	COG1132	(ABC) transporter
JOF24_RS17740	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JOF24_RS17750	COG2181	nitrate reductase activity
JOF24_RS17755	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JOF24_RS17760	COG1140	nitrate reductase beta subunit
JOF24_RS17765	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JOF24_RS17770	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JOF24_RS17780	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JOF24_RS17785	COG2223	nitrite transmembrane transporter activity
JOF24_RS17795	COG4506	Protein conserved in bacteria
JOF24_RS17805	COG3391	amine dehydrogenase activity
JOF24_RS17810	COG3391	amine dehydrogenase activity
JOF24_RS17815	COG0457	Tetratricopeptide repeat
JOF24_RS17855	COG0010	Belongs to the arginase family
JOF24_RS17860	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
JOF24_RS17865	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JOF24_RS17880	COG1994	Peptidase M50
JOF24_RS17885	COG1942	4-Oxalocrotonate Tautomerase
JOF24_RS17890	COG1846	Transcriptional regulator
JOF24_RS17895	COG0531	amino acid
JOF24_RS17900	COG3465	dGTPase activity
JOF24_RS17905	COG1078	dGTPase activity
JOF24_RS17920	COG1695	Transcriptional regulator
JOF24_RS17930	COG1131	(ABC) transporter
JOF24_RS17935	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JOF24_RS17965	COG0583	DNA-binding transcription factor activity
JOF24_RS17970	COG2855	membrane
JOF24_RS17975	COG0280	phosphate acetyltransferase
JOF24_RS17985	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS17990	COG0436	Aminotransferase
JOF24_RS18020	COG2814	Major facilitator Superfamily
JOF24_RS18025	COG2814	Major facilitator Superfamily
JOF24_RS18030	COG0833	amino acid
JOF24_RS18035	COG4187	Peptidase family M20/M25/M40
JOF24_RS18040	COG1012	belongs to the aldehyde dehydrogenase family
JOF24_RS18045	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JOF24_RS18055	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
JOF24_RS18060	COG1091	dTDP-4-dehydrorhamnose reductase activity
JOF24_RS18065	COG1088	dTDP-glucose 4,6-dehydratase activity
JOF24_RS18070	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JOF24_RS18075	COG3980	spore coat polysaccharide biosynthesis protein
JOF24_RS18080	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
JOF24_RS18085	COG2089	acid synthase
JOF24_RS18090	COG0456	acetyltransferase
JOF24_RS18095	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JOF24_RS18100	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JOF24_RS18105	COG0463	Glycosyl transferase, family 2
JOF24_RS18115	COG2363	Small membrane protein
JOF24_RS18120	COG2233	PERMEase
JOF24_RS18135	COG1216	Glycosyl transferase, family 2
JOF24_RS18140	COG0351	phosphomethylpyrimidine kinase
JOF24_RS18150	COG1621	beta-fructofuranosidase activity
JOF24_RS18155	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JOF24_RS18155	COG1263	PTS System
JOF24_RS18160	COG3711	transcriptional antiterminator
JOF24_RS18170	COG1404	Belongs to the peptidase S8 family
JOF24_RS18175	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JOF24_RS18180	COG0778	Nitroreductase
JOF24_RS18185	COG0772	Belongs to the SEDS family
JOF24_RS18190	COG0454	-acetyltransferase
JOF24_RS18210	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JOF24_RS18215	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JOF24_RS18220	COG2261	transglycosylase associated protein
JOF24_RS18225	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
JOF24_RS18230	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JOF24_RS18235	COG2246	polysaccharide biosynthetic process
JOF24_RS18240	COG1309	transcriptional regulator
JOF24_RS18260	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
JOF24_RS18265	COG2837	iron assimilation
JOF24_RS18270	COG2822	iron ion transport
JOF24_RS18285	COG0583	DNA-binding transcription factor activity
JOF24_RS18295	COG1346	cytolysis
JOF24_RS18300	COG4895	conserved protein (DUF2196)
JOF24_RS18305	COG0789	Transcriptional regulator
JOF24_RS18310	COG5504	Zn-dependent protease
JOF24_RS18315	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JOF24_RS18320	COG0346	lactoylglutathione lyase activity
JOF24_RS18325	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JOF24_RS18330	COG1404	Belongs to the peptidase S8 family
JOF24_RS18335	COG1442	glycosyl transferase family 8
JOF24_RS18340	COG2357	RelA SpoT domain protein
JOF24_RS18345	COG1575	Belongs to the MenA family. Type 1 subfamily
JOF24_RS18360	COG1696	Membrane protein involved in D-alanine export
JOF24_RS18370	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
JOF24_RS18375	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JOF24_RS18380	COG1486	melibiose metabolic process
JOF24_RS18385	COG1447	Phosphotransferase system cellobiose-specific component IIA
JOF24_RS18390	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JOF24_RS18395	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JOF24_RS18400	COG3711	transcriptional antiterminator
JOF24_RS18400	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JOF24_RS18410	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JOF24_RS18415	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JOF24_RS18425	COG0640	Transcriptional regulator
JOF24_RS18430	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JOF24_RS18435	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JOF24_RS18440	COG1447	Phosphotransferase system cellobiose-specific component IIA
JOF24_RS18445	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JOF24_RS18450	COG2723	6-phospho-beta-galactosidase activity
JOF24_RS18455	COG1940	carbohydrate kinase activity
JOF24_RS18460	COG1482	cell wall glycoprotein biosynthetic process
JOF24_RS18470	COG0753	catalase activity
JOF24_RS18475	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
JOF24_RS18480	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JOF24_RS18485	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
JOF24_RS18490	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
JOF24_RS18495	COG4988	ABC transporter
JOF24_RS18500	COG1294	oxidase, subunit
JOF24_RS18505	COG1271	oxidase subunit
JOF24_RS18510	COG3493	citrate carrier protein
JOF24_RS18515	COG0726	polysaccharide deacetylase
JOF24_RS18520	COG3842	ATPase activity
JOF24_RS18525	COG2508	Transcriptional regulator
JOF24_RS18530	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JOF24_RS18540	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JOF24_RS18555	COG4894	glucomannan catabolic process
JOF24_RS18560	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JOF24_RS18565	COG0500	methyltransferase
JOF24_RS18570	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JOF24_RS18590	COG0693	protein deglycase activity
JOF24_RS18590	COG0753	catalase activity
JOF24_RS18595	COG2851	Citrate transporter
JOF24_RS18600	COG2273	Hydrolase Family 16
JOF24_RS18605	COG3711	transcriptional antiterminator
JOF24_RS18610	COG2270	Major facilitator Superfamily
JOF24_RS18615	COG0513	Belongs to the DEAD box helicase family
JOF24_RS18695	COG0697	spore germination
JOF24_RS18700	COG0589	response to stress
JOF24_RS18765	COG3507	Belongs to the glycosyl hydrolase 43 family
JOF24_RS18790	COG0010	Belongs to the arginase family
JOF24_RS18795	COG0833	amino acid
JOF24_RS18800	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
JOF24_RS18805	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JOF24_RS18815	COG2390	Transcriptional regulator
JOF24_RS18820	COG0561	phosphatase activity
JOF24_RS18850	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JOF24_RS18855	COG5294	Protein conserved in bacteria
JOF24_RS18860	COG0577	efflux transmembrane transporter activity
JOF24_RS18865	COG1136	(ABC) transporter
JOF24_RS18870	COG2205	protein histidine kinase activity
JOF24_RS18875	COG0745	RESPONSE REGULATOR receiver
JOF24_RS18880	COG2205	protein histidine kinase activity
JOF24_RS18885	COG0745	RESPONSE REGULATOR receiver
JOF24_RS18915	COG1082	Xylose isomerase domain protein TIM barrel
JOF24_RS18925	COG2814	Major facilitator Superfamily
JOF24_RS18955	COG1349	DNA-binding transcription factor activity
JOF24_RS18960	COG0667	Aldo Keto reductase
JOF24_RS18965	COG2814	Major facilitator Superfamily
JOF24_RS18975	COG1028	Short-chain dehydrogenase reductase Sdr
JOF24_RS18980	COG2197	response regulator
JOF24_RS18985	COG4585	Histidine kinase
JOF24_RS18990	COG3239	Fatty acid desaturase
JOF24_RS18995	COG1309	transcriptional regulator
JOF24_RS19000	COG1012	belongs to the aldehyde dehydrogenase family
JOF24_RS19005	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JOF24_RS19015	COG0640	Transcriptional regulator
JOF24_RS19020	COG2814	Major facilitator Superfamily
JOF24_RS19025	COG1714	RDD family
JOF24_RS19035	COG0450	alkyl hydroperoxide reductase
JOF24_RS19040	COG3634	alkyl hydroperoxide reductase activity
JOF24_RS19050	COG1113	amino acid transport
JOF24_RS19060	COG2080	2 iron, 2 sulfur cluster binding
JOF24_RS19075	COG2068	MobA-Related Protein
JOF24_RS19080	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
JOF24_RS19140	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
JOF24_RS19145	COG0667	Aldo Keto reductase
JOF24_RS19150	COG0456	acetyltransferase
JOF24_RS19155	COG0457	Tetratricopeptide repeat
JOF24_RS19160	COG0010	Belongs to the arginase family
JOF24_RS19165	COG0833	amino acid
JOF24_RS19170	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JOF24_RS19175	COG5658	integral membrane protein
JOF24_RS19180	COG0640	Transcriptional regulator
JOF24_RS19185	COG3829	transcription factor binding
JOF24_RS19195	COG0488	(ABC) transporter
JOF24_RS19210	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JOF24_RS19215	COG3850	Histidine kinase
JOF24_RS19215	COG5002	protein histidine kinase activity
JOF24_RS19220	COG0745	RESPONSE REGULATOR receiver
JOF24_RS19225	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JOF24_RS19230	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JOF24_RS19235	COG4853	Protein conserved in bacteria
JOF24_RS19240	COG4863	YycH protein
JOF24_RS19245	COG5002	protein histidine kinase activity
JOF24_RS19250	COG0745	RESPONSE REGULATOR receiver
JOF24_RS19280	COG0346	lactoylglutathione lyase activity
JOF24_RS19285	COG0305	Participates in initiation and elongation during chromosome replication
JOF24_RS19300	COG3093	addiction module antidote protein HigA
JOF24_RS19305	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
JOF24_RS19310	COG0297	glycogen (starch) synthase activity
JOF24_RS19320	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
JOF24_RS19325	COG0438	transferase activity, transferring glycosyl groups
JOF24_RS19335	COG2112	serine threonine protein kinase
JOF24_RS19350	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
JOF24_RS19355	COG4241	membrane
JOF24_RS19365	COG5577	PFAM Coat F domain
JOF24_RS19370	COG1733	regulation of RNA biosynthetic process
JOF24_RS19380	COG0697	spore germination
JOF24_RS19385	COG1621	beta-fructofuranosidase activity
JOF24_RS19390	COG1621	beta-fructofuranosidase activity
JOF24_RS19395	COG1802	Transcriptional regulator
JOF24_RS19400	COG2318	DinB family
JOF24_RS19405	COG2211	Major facilitator Superfamily
JOF24_RS19410	COG0697	spore germination
JOF24_RS19420	COG0778	Nitroreductase
JOF24_RS19425	COG1846	Transcriptional regulator
JOF24_RS19430	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JOF24_RS19435	COG1846	Transcriptional regulator
JOF24_RS19440	COG2153	protein acetylation
JOF24_RS19450	COG0546	phosphoglycolate phosphatase activity
JOF24_RS19480	COG1404	Belongs to the peptidase S8 family
JOF24_RS19490	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JOF24_RS19495	COG0697	spore germination
JOF24_RS19500	COG1078	dGTPase activity
JOF24_RS19510	COG1331	Highly conserved protein containing a thioredoxin domain
JOF24_RS19515	COG4978	Transcriptional regulator
JOF24_RS19515	COG0789	Transcriptional regulator
JOF24_RS19520	COG1811	Na channel or pump
JOF24_RS19525	COG1331	Highly conserved protein containing a thioredoxin domain
JOF24_RS19530	COG1331	Highly conserved protein containing a thioredoxin domain
JOF24_RS19535	COG1266	CAAX protease self-immunity
JOF24_RS19540	COG0477	Major facilitator Superfamily
JOF24_RS19540	COG2814	Major facilitator Superfamily
JOF24_RS19545	COG0346	lactoylglutathione lyase activity
JOF24_RS19550	COG1609	Transcriptional regulator
JOF24_RS19555	COG0708	Exodeoxyribonuclease III
JOF24_RS19560	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JOF24_RS19565	COG2169	Transcriptional regulator
JOF24_RS19575	COG0629	single-stranded DNA binding
JOF24_RS19585	COG0012	GTP binding
JOF24_RS19590	COG0243	molybdopterin cofactor binding
JOF24_RS19595	COG4481	Protein conserved in bacteria
JOF24_RS19600	COG3949	Membrane
JOF24_RS19615	COG1475	DNA binding
JOF24_RS19620	COG1192	Involved in chromosome partitioning
JOF24_RS19645	COG1847	R3H domain protein
JOF24_RS19650	COG0706	membrane insertase activity