locus-tag	class	description
AAV29_RS00010	COG0592	DNA-directed DNA polymerase activity
AAV29_RS00015	COG2501	S4 domain
AAV29_RS00030	COG0187	DNA topoisomerase II activity
AAV29_RS00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AAV29_RS00070	COG0517	IMP dehydrogenase activity
AAV29_RS00070	COG0516	GMP reductase activity
AAV29_RS00075	COG1686	Belongs to the peptidase S11 family
AAV29_RS00095	COG1929	Belongs to the glycerate kinase type-1 family
AAV29_RS00105	COG1428	Deoxynucleoside kinase
AAV29_RS00110	COG1428	Deoxynucleoside kinase
AAV29_RS00115	COG1388	LysM domain
AAV29_RS00115	COG3858	chitin binding
AAV29_RS00120	COG1335	isochorismatase
AAV29_RS00125	COG0590	tRNA wobble adenosine to inosine editing
AAV29_RS00130	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AAV29_RS00135	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AAV29_RS00185	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
AAV29_RS00190	COG3853	Toxic anion resistance protein (TelA)
AAV29_RS00195	COG1982	Orn Lys Arg decarboxylase major
AAV29_RS00205	COG3870	Protein conserved in bacteria
AAV29_RS00210	COG1728	Protein conserved in bacteria
AAV29_RS00215	COG0470	DNA polymerase III
AAV29_RS00220	COG1774	PSP1 C-terminal conserved region
AAV29_RS00230	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
AAV29_RS00240	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AAV29_RS00245	COG2002	toxin-antitoxin pair type II binding
AAV29_RS00250	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AAV29_RS00250	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AAV29_RS00255	COG0084	hydrolase, TatD family'
AAV29_RS00260	COG3584	3D domain protein
AAV29_RS00260	COG3583	domain protein
AAV29_RS00265	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AAV29_RS00270	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AAV29_RS00280	COG4466	Protein conserved in bacteria
AAV29_RS00295	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AAV29_RS00300	COG0251	oxidation-reduction process
AAV29_RS00315	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AAV29_RS00335	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AAV29_RS00340	COG2002	toxin-antitoxin pair type II binding
AAV29_RS00345	COG2244	polysaccharide biosynthetic process
AAV29_RS00350	COG3956	TIGRFAM MazG family protein
AAV29_RS00355	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AAV29_RS00370	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
AAV29_RS00375	COG1098	S1 RNA binding domain
AAV29_RS00390	COG2208	phosphoserine phosphatase activity
AAV29_RS00395	COG2304	oxidoreductase activity
AAV29_RS00400	COG0515	serine threonine protein kinase
AAV29_RS00405	COG0037	tRNA processing
AAV29_RS00410	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
AAV29_RS00415	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AAV29_RS00430	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AAV29_RS00435	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AAV29_RS00440	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AAV29_RS00445	COG0512	Glutamine amidotransferase of anthranilate synthase
AAV29_RS00450	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AAV29_RS00455	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AAV29_RS00460	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AAV29_RS00465	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AAV29_RS00470	COG1396	sequence-specific DNA binding
AAV29_RS00475	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AAV29_RS00480	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AAV29_RS00560	COG4463	regulation of RNA biosynthetic process
AAV29_RS00565	COG3880	PFAM UvrB UvrC protein
AAV29_RS00575	COG0542	response to heat
AAV29_RS00580	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AAV29_RS00585	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
AAV29_RS00590	COG4956	integral membrane protein (PIN domain superfamily)
AAV29_RS00610	COG1045	serine acetyltransferase
AAV29_RS00620	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
AAV29_RS00625	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AAV29_RS00630	COG3688	RNA-binding protein containing a PIN domain
AAV29_RS00635	COG1595	DNA-templated transcription, initiation
AAV29_RS00640	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AAV29_RS00645	COG0250	Participates in transcription elongation, termination and antitermination
AAV29_RS00670	COG2813	Specifically methylates the guanine in position
AAV29_RS00685	COG1358	cellular component organization or biogenesis
AAV29_RS00710	COG0596	Alpha beta hydrolase
AAV29_RS00815	COG0201	protein transport
AAV29_RS00825	COG0024	Methionine aminopeptidase
AAV29_RS00835	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AAV29_RS00860	COG1122	ATPase activity
AAV29_RS00865	COG1122	ATPase activity
AAV29_RS00870	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AAV29_RS00890	COG2226	methyltransferase
AAV29_RS00895	COG2318	DinB family
AAV29_RS00905	COG0860	N-Acetylmuramoyl-L-alanine amidase
AAV29_RS00910	COG0489	protein tyrosine kinase activity
AAV29_RS00920	COG2194	sulfuric ester hydrolase activity
AAV29_RS00925	COG0726	polysaccharide deacetylase
AAV29_RS00985	COG0738	Major facilitator superfamily
AAV29_RS00990	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AAV29_RS01005	COG0659	secondary active sulfate transmembrane transporter activity
AAV29_RS01010	COG0385	Bile acid
AAV29_RS01015	COG2819	hydrolase of the alpha beta superfamily
AAV29_RS01020	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AAV29_RS01025	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AAV29_RS01030	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AAV29_RS01035	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AAV29_RS01035	COG2207	Transcriptional regulator
AAV29_RS01040	COG3876	Protein conserved in bacteria
AAV29_RS01045	COG1472	Belongs to the glycosyl hydrolase 3 family
AAV29_RS01050	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AAV29_RS01055	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AAV29_RS01055	COG1263	PTS System
AAV29_RS01065	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AAV29_RS01070	COG1683	Conserved Protein
AAV29_RS01100	COG1595	DNA-templated transcription, initiation
AAV29_RS01105	COG5662	AntiSigma factor
AAV29_RS01110	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
AAV29_RS01115	COG4856	YbbR-like protein
AAV29_RS01155	COG1346	cytolysis
AAV29_RS01160	COG1380	Effector of murein hydrolase LrgA
AAV29_RS01165	COG1846	Transcriptional regulator
AAV29_RS01170	COG1113	amino acid transport
AAV29_RS01175	COG1011	Hydrolase
AAV29_RS01180	COG4585	Histidine kinase
AAV29_RS01185	COG2197	response regulator
AAV29_RS01190	COG1131	(ABC) transporter
AAV29_RS01230	COG0531	amino acid
AAV29_RS01235	COG0584	glycerophosphoryl diester phosphodiesterase
AAV29_RS01240	COG2271	Major facilitator Superfamily
AAV29_RS01250	COG2368	4-hydroxyphenylacetate
AAV29_RS01260	COG3409	Peptidoglycan-binding domain 1 protein
AAV29_RS01275	COG0371	Dehydrogenase
AAV29_RS01285	COG1183	phosphatidylcholine synthase activity
AAV29_RS01290	COG0586	Pfam SNARE associated Golgi protein
AAV29_RS01295	COG0688	phosphatidylethanolamine metabolic process
AAV29_RS01310	COG1301	dicarboxylic acid transport
AAV29_RS01315	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AAV29_RS01320	COG0833	amino acid
AAV29_RS01325	COG2040	homocysteine
AAV29_RS01330	COG1115	amino acid carrier protein
AAV29_RS01335	COG2066	Belongs to the glutaminase family
AAV29_RS01340	COG4191	Histidine kinase
AAV29_RS01345	COG0784	Response regulator, receiver
AAV29_RS01350	COG3173	Aminoglycoside phosphotransferase
AAV29_RS01360	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AAV29_RS01365	COG0778	Nitroreductase
AAV29_RS01370	COG0346	lactoylglutathione lyase activity
AAV29_RS01375	COG2259	Doxx family
AAV29_RS01380	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AAV29_RS01390	COG3773	Cell wall hydrolase
AAV29_RS01395	COG3540	Alkaline phosphatase
AAV29_RS01400	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AAV29_RS01405	COG0805	protein transport
AAV29_RS01415	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AAV29_RS01420	COG0477	Major facilitator Superfamily
AAV29_RS01425	COG1309	transcriptional regulator
AAV29_RS01430	COG0252	asparaginase activity
AAV29_RS01435	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
AAV29_RS01440	COG1405	negative regulation of cell septum assembly
AAV29_RS01440	COG3012	SEC-C Motif Domain Protein
AAV29_RS01445	COG0667	Aldo Keto reductase
AAV29_RS01455	COG1595	DNA-templated transcription, initiation
AAV29_RS01460	COG1595	DNA-templated transcription, initiation
AAV29_RS01465	COG1876	peptidase activity
AAV29_RS01470	COG0457	Tetratricopeptide repeat
AAV29_RS01475	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS01480	COG0366	Alpha amylase catalytic
AAV29_RS01485	COG0803	Belongs to the bacterial solute-binding protein 9 family
AAV29_RS01490	COG1121	(ABC) transporter
AAV29_RS01495	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AAV29_RS01500	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AAV29_RS01505	COG2310	stress, protein
AAV29_RS01510	COG2310	stress, protein
AAV29_RS01515	COG2310	stress, protein
AAV29_RS01520	COG0861	Integral membrane protein TerC family
AAV29_RS01530	COG3853	Toxic anion resistance protein (TelA)
AAV29_RS01535	COG0477	Major facilitator Superfamily
AAV29_RS01540	COG4175	Glycine betaine
AAV29_RS01540	COG0517	IMP dehydrogenase activity
AAV29_RS01545	COG4176	ABC-type proline glycine betaine transport system permease component
AAV29_RS01550	COG2113	Glycine betaine
AAV29_RS01555	COG1473	amidohydrolase
AAV29_RS01560	COG1288	antiporter activity
AAV29_RS01570	COG0366	Alpha amylase catalytic
AAV29_RS01580	COG2814	Major facilitator Superfamily
AAV29_RS01585	COG1846	Transcriptional regulator
AAV29_RS01590	COG1280	lysine exporter protein (LysE YggA)
AAV29_RS01595	COG3403	YqcI/YcgG family
AAV29_RS01600	COG1113	amino acid transport
AAV29_RS01605	COG3665	Urea carboxylase-associated protein
AAV29_RS01620	COG1660	Displays ATPase and GTPase activities
AAV29_RS01630	COG2271	Major facilitator Superfamily
AAV29_RS01635	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AAV29_RS01640	COG3458	cephalosporin-C deacetylase activity
AAV29_RS01645	COG3541	Predicted nucleotidyltransferase
AAV29_RS01650	COG0506	proline dehydrogenase activity
AAV29_RS01655	COG1012	belongs to the aldehyde dehydrogenase family
AAV29_RS01660	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AAV29_RS01665	COG2508	Transcriptional regulator
AAV29_RS01675	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AAV29_RS01675	COG1587	Uroporphyrinogen-III synthase
AAV29_RS01680	COG2146	nitrite reductase [NAD(P)H] activity
AAV29_RS01685	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AAV29_RS01690	COG0523	cobalamin synthesis protein
AAV29_RS01695	COG1063	alcohol dehydrogenase
AAV29_RS01700	COG1714	RDD family
AAV29_RS01710	COG2723	6-phospho-beta-galactosidase activity
AAV29_RS01720	COG3209	COG3209 Rhs family protein
AAV29_RS01725	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AAV29_RS01730	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
AAV29_RS01735	COG1733	regulation of RNA biosynthetic process
AAV29_RS01740	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS01745	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS01750	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS01755	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
AAV29_RS01770	COG2364	Membrane
AAV29_RS01775	COG1126	abc transporter atp-binding protein
AAV29_RS01780	COG0765	amino acid transport
AAV29_RS01785	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AAV29_RS01790	COG0583	DNA-binding transcription factor activity
AAV29_RS01795	COG0163	prenyltransferase activity
AAV29_RS01800	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AAV29_RS01815	COG3104	oligopeptide transport
AAV29_RS01820	COG5434	Belongs to the glycosyl hydrolase 28 family
AAV29_RS01830	COG0697	spore germination
AAV29_RS01840	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
AAV29_RS01845	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AAV29_RS01850	COG0456	acetyltransferase
AAV29_RS01855	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AAV29_RS01860	COG0765	amino acid transport
AAV29_RS01865	COG1126	abc transporter atp-binding protein
AAV29_RS01870	COG1473	amidohydrolase
AAV29_RS01875	COG2079	MmgE PrpD family protein
AAV29_RS01880	COG1136	(ABC) transporter
AAV29_RS01885	COG0577	efflux transmembrane transporter activity
AAV29_RS01890	COG0745	RESPONSE REGULATOR receiver
AAV29_RS01895	COG5002	protein histidine kinase activity
AAV29_RS01895	COG3850	Histidine kinase
AAV29_RS01900	COG0457	Tetratricopeptide repeat
AAV29_RS01910	COG0527	aspartate kinase activity
AAV29_RS01915	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AAV29_RS01920	COG4605	iron ion homeostasis
AAV29_RS01925	COG4604	ABC transporter, ATP-binding protein
AAV29_RS01930	COG4607	ABC-type enterochelin transport system periplasmic component
AAV29_RS01935	COG2814	Major facilitator Superfamily
AAV29_RS01940	COG1309	transcriptional regulator
AAV29_RS01945	COG0778	Nitroreductase
AAV29_RS01950	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AAV29_RS01955	COG0640	Transcriptional regulator
AAV29_RS01960	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AAV29_RS01965	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AAV29_RS01970	COG1012	belongs to the aldehyde dehydrogenase family
AAV29_RS01975	COG4975	Glucose uptake
AAV29_RS01980	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS01985	COG4549	nuclear export factor GLE1
AAV29_RS01990	COG1276	copper resistance
AAV29_RS01990	COG2372	response to copper ion
AAV29_RS01995	COG1349	DNA-binding transcription factor activity
AAV29_RS02005	COG2213	PTS system mannitol-specific
AAV29_RS02010	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AAV29_RS02020	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AAV29_RS02025	COG0561	phosphatase activity
AAV29_RS02035	COG1914	H( )-stimulated, divalent metal cation uptake system
AAV29_RS02045	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AAV29_RS02050	COG1984	allophanate hydrolase subunit 2
AAV29_RS02055	COG1414	Transcriptional regulator
AAV29_RS02060	COG2755	lipolytic protein G-D-S-L family
AAV29_RS02070	COG2329	Antibiotic biosynthesis monooxygenase
AAV29_RS02075	COG0768	penicillin binding
AAV29_RS02080	COG4989	oxidoreductase activity
AAV29_RS02085	COG3711	transcriptional antiterminator
AAV29_RS02090	COG0318	PFAM AMP-dependent synthetase and ligase
AAV29_RS02095	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS02100	COG1917	Cupin 2, conserved barrel domain protein
AAV29_RS02105	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AAV29_RS02110	COG3871	stress protein (general stress protein 26)
AAV29_RS02120	COG2814	Major facilitator Superfamily
AAV29_RS02125	COG1522	sequence-specific DNA binding
AAV29_RS02130	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AAV29_RS02130	COG0551	DNA topoisomerase type I activity
AAV29_RS02135	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
AAV29_RS02140	COG3706	GGDEF domain
AAV29_RS02145	COG5298	Protein conserved in bacteria
AAV29_RS02150	COG1215	transferase activity, transferring glycosyl groups
AAV29_RS02160	COG0531	amino acid
AAV29_RS02165	COG0494	nUDIX hydrolase
AAV29_RS02170	COG0028	Belongs to the TPP enzyme family
AAV29_RS02215	COG0457	Tetratricopeptide repeat
AAV29_RS02245	COG1914	H( )-stimulated, divalent metal cation uptake system
AAV29_RS02260	COG4876	unkown
AAV29_RS02270	COG2076	Multidrug Resistance protein
AAV29_RS02275	COG2217	Heavy metal translocating P-type atpase
AAV29_RS02280	COG3729	General stress protein
AAV29_RS02285	COG0662	Cupin 2, conserved barrel domain protein
AAV29_RS02290	COG2329	Antibiotic biosynthesis monooxygenase
AAV29_RS02295	COG3546	catalase activity
AAV29_RS02300	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
AAV29_RS02305	COG3290	protein histidine kinase activity
AAV29_RS02310	COG4565	transcriptional regulatory protein
AAV29_RS02315	COG1301	dicarboxylic acid transport
AAV29_RS02320	COG0628	permease
AAV29_RS02325	COG1131	(ABC) transporter
AAV29_RS02330	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
AAV29_RS02340	COG1960	acyl-CoA dehydrogenase activity
AAV29_RS02350	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AAV29_RS02355	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AAV29_RS02365	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AAV29_RS02370	COG0513	Belongs to the DEAD box helicase family
AAV29_RS02375	COG3402	PFAM membrane-flanked domain
AAV29_RS02380	COG3428	Bacterial PH domain
AAV29_RS02385	COG0705	Rhomboid family
AAV29_RS02395	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
AAV29_RS02400	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AAV29_RS02405	COG0864	Transcriptional regulator
AAV29_RS02410	COG2337	Toxic component of a toxin-antitoxin (TA) module
AAV29_RS02415	COG1366	Belongs to the anti-sigma-factor antagonist family
AAV29_RS02420	COG1366	Belongs to the anti-sigma-factor antagonist family
AAV29_RS02425	COG2172	sigma factor antagonist activity
AAV29_RS02430	COG2208	phosphoserine phosphatase activity
AAV29_RS02435	COG1366	Belongs to the anti-sigma-factor antagonist family
AAV29_RS02445	COG1191	sigma factor activity
AAV29_RS02450	COG2208	phosphoserine phosphatase activity
AAV29_RS02455	COG2183	response to ionizing radiation
AAV29_RS02500	COG2249	NAD(P)H dehydrogenase (quinone) activity
AAV29_RS02510	COG0477	Major facilitator Superfamily
AAV29_RS02520	COG1764	response to oxidative stress
AAV29_RS02525	COG1846	Transcriptional regulator
AAV29_RS02535	COG2030	dehydratase
AAV29_RS02545	COG1959	2 iron, 2 sulfur cluster binding
AAV29_RS02550	COG2910	NAD(P)H-binding
AAV29_RS02555	COG1278	Cold shock
AAV29_RS02560	COG1329	Transcriptional regulator
AAV29_RS02565	COG1937	Protein conserved in bacteria
AAV29_RS02570	COG2210	Belongs to the sulfur carrier protein TusA family
AAV29_RS02580	COG0425	Belongs to the sulfur carrier protein TusA family
AAV29_RS02580	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AAV29_RS02585	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AAV29_RS02585	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AAV29_RS02590	COG0425	Belongs to the sulfur carrier protein TusA family
AAV29_RS02595	COG0730	response to heat
AAV29_RS02600	COG1794	racemase activity, acting on amino acids and derivatives
AAV29_RS02615	COG3621	Patatin-like phospholipase
AAV29_RS02625	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AAV29_RS02630	COG1802	Transcriptional regulator
AAV29_RS02635	COG0251	oxidation-reduction process
AAV29_RS02640	COG0814	amino acid
AAV29_RS02650	COG2207	Transcriptional regulator
AAV29_RS02650	COG1917	Cupin 2, conserved barrel domain protein
AAV29_RS02660	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AAV29_RS02665	COG0477	Major facilitator Superfamily
AAV29_RS02685	COG0277	FAD linked oxidase domain protein
AAV29_RS02720	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AAV29_RS02745	COG1064	alcohol dehydrogenase
AAV29_RS02750	COG0789	Transcriptional regulator
AAV29_RS02760	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AAV29_RS02775	COG2814	Major facilitator Superfamily
AAV29_RS02780	COG1309	transcriptional regulator
AAV29_RS02785	COG5577	PFAM Coat F domain
AAV29_RS02795	COG1063	alcohol dehydrogenase
AAV29_RS02800	COG5577	PFAM Coat F domain
AAV29_RS02815	COG4585	Histidine kinase
AAV29_RS02820	COG2197	response regulator
AAV29_RS02825	COG2409	Drug exporters of the RND superfamily
AAV29_RS02830	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AAV29_RS02835	COG0488	(ABC) transporter
AAV29_RS02840	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AAV29_RS02845	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AAV29_RS02855	COG2814	Major facilitator Superfamily
AAV29_RS02860	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AAV29_RS02870	COG0730	response to heat
AAV29_RS02875	COG0456	acetyltransferase
AAV29_RS02880	COG4978	Transcriptional regulator
AAV29_RS02880	COG0789	Transcriptional regulator
AAV29_RS02885	COG0697	spore germination
AAV29_RS02890	COG1051	belongs to the nudix hydrolase family
AAV29_RS02895	COG2226	methyltransferase
AAV29_RS02900	COG0473	3-isopropylmalate dehydrogenase activity
AAV29_RS02905	COG1802	Transcriptional regulator
AAV29_RS02910	COG1819	glycosyl
AAV29_RS02930	COG1388	LysM domain
AAV29_RS02935	COG2814	Major facilitator Superfamily
AAV29_RS02940	COG2188	Transcriptional regulator
AAV29_RS02945	COG2186	Transcriptional regulator
AAV29_RS02950	COG2807	transmembrane transport
AAV29_RS02955	COG2076	Multidrug Resistance protein
AAV29_RS02960	COG2076	Multidrug Resistance protein
AAV29_RS02965	COG1309	transcriptional regulator
AAV29_RS02970	COG0531	amino acid
AAV29_RS02980	COG3832	glyoxalase III activity
AAV29_RS02985	COG0604	alcohol dehydrogenase
AAV29_RS02990	COG2814	Major facilitator Superfamily
AAV29_RS03035	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AAV29_RS03040	COG0802	atpase or kinase
AAV29_RS03045	COG1214	PFAM Peptidase M22, glycoprotease
AAV29_RS03050	COG0456	acetyltransferase
AAV29_RS03055	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AAV29_RS03060	COG0488	(ABC) transporter
AAV29_RS03075	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AAV29_RS03080	COG0805	protein transport
AAV29_RS03090	COG1266	CAAX protease self-immunity
AAV29_RS03145	COG1131	(ABC) transporter
AAV29_RS03150	COG0842	Transport permease protein
AAV29_RS03155	COG0457	Tetratricopeptide repeat
AAV29_RS03160	COG1063	alcohol dehydrogenase
AAV29_RS03165	COG2211	Major facilitator Superfamily
AAV29_RS03170	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AAV29_RS03180	COG1842	Phage shock protein A
AAV29_RS03185	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AAV29_RS03190	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
AAV29_RS03195	COG4260	virion core protein, lumpy skin disease virus
AAV29_RS03200	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AAV29_RS03200	COG2755	lipolytic protein G-D-S-L family
AAV29_RS03210	COG1595	DNA-templated transcription, initiation
AAV29_RS03215	COG1063	alcohol dehydrogenase
AAV29_RS03220	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AAV29_RS03225	COG0823	Involved in the tonB-independent uptake of proteins
AAV29_RS03240	COG2132	Multicopper oxidase
AAV29_RS03245	COG1113	amino acid transport
AAV29_RS03250	COG0714	Associated with various cellular activities
AAV29_RS03255	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
AAV29_RS03260	COG1305	Transglutaminase-like
AAV29_RS03280	COG2252	PERMEase
AAV29_RS03285	COG3064	Membrane
AAV29_RS03305	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AAV29_RS03310	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AAV29_RS03315	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AAV29_RS03320	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AAV29_RS03325	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AAV29_RS03340	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AAV29_RS03350	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AAV29_RS03355	COG0138	bifunctional purine biosynthesis protein purh
AAV29_RS03360	COG0151	Belongs to the GarS family
AAV29_RS03370	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AAV29_RS03375	COG1470	cell adhesion involved in biofilm formation
AAV29_RS03380	COG4496	protein, YerC YecD
AAV29_RS03385	COG0069	glutamate synthase activity
AAV29_RS03400	COG0210	DNA helicase
AAV29_RS03410	COG4851	CamS sex pheromone cAM373 precursor
AAV29_RS03415	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AAV29_RS03420	COG1285	pathogenesis
AAV29_RS03425	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AAV29_RS03445	COG1309	transcriptional regulator
AAV29_RS03450	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AAV29_RS03455	COG1597	lipid kinase activity
AAV29_RS03460	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AAV29_RS03470	COG1131	(ABC) transporter
AAV29_RS03495	COG5444	nuclease activity
AAV29_RS03530	COG3546	catalase activity
AAV29_RS03535	COG0454	-acetyltransferase
AAV29_RS03545	COG2323	membrane
AAV29_RS03550	COG2329	Antibiotic biosynthesis monooxygenase
AAV29_RS03555	COG0346	lactoylglutathione lyase activity
AAV29_RS03560	COG1366	Belongs to the anti-sigma-factor antagonist family
AAV29_RS03565	COG0196	riboflavin kinase activity
AAV29_RS03570	COG0670	Belongs to the BI1 family
AAV29_RS03580	COG1846	Transcriptional regulator
AAV29_RS03585	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AAV29_RS03595	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AAV29_RS03595	COG2124	cytochrome p450
AAV29_RS03610	COG1131	(ABC) transporter
AAV29_RS03650	COG4106	trans-aconitate 2-methyltransferase activity
AAV29_RS03660	COG1368	sulfuric ester hydrolase activity
AAV29_RS03665	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AAV29_RS03670	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AAV29_RS03675	COG1442	glycosyl transferase family 8
AAV29_RS03680	COG1216	Glycosyl transferase, family 2
AAV29_RS03685	COG1442	glycosyl transferase family 8
AAV29_RS03690	COG2223	nitrite transmembrane transporter activity
AAV29_RS03695	COG0531	amino acid
AAV29_RS03700	COG1012	belongs to the aldehyde dehydrogenase family
AAV29_RS03705	COG0840	transmembrane signaling receptor activity
AAV29_RS03710	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS03715	COG0463	Glycosyl transferase, family 2
AAV29_RS03715	COG0457	Tetratricopeptide repeat
AAV29_RS03720	COG0488	(ABC) transporter
AAV29_RS03725	COG0789	Transcriptional regulator
AAV29_RS03730	COG2814	Major facilitator Superfamily
AAV29_RS03735	COG0488	(ABC) transporter
AAV29_RS03740	COG0513	Belongs to the DEAD box helicase family
AAV29_RS03750	COG2130	NADP-dependent
AAV29_RS03765	COG3866	Pectate lyase
AAV29_RS03770	COG0471	metal ion transport
AAV29_RS03790	COG2972	Histidine kinase
AAV29_RS03790	COG0745	RESPONSE REGULATOR receiver
AAV29_RS03795	COG3279	Response regulator of the LytR AlgR family
AAV29_RS03805	COG3764	Sortase (surface protein transpeptidase)
AAV29_RS03810	COG3290	protein histidine kinase activity
AAV29_RS03815	COG4565	transcriptional regulatory protein
AAV29_RS03820	COG3181	Tripartite tricarboxylate transporter family receptor
AAV29_RS03825	COG2851	Citrate transporter
AAV29_RS03830	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AAV29_RS03835	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
AAV29_RS03845	COG2258	MOSC domain
AAV29_RS03855	COG0024	Methionine aminopeptidase
AAV29_RS03860	COG1263	PTS System
AAV29_RS03860	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AAV29_RS03870	COG1368	sulfuric ester hydrolase activity
AAV29_RS03880	COG0071	Belongs to the small heat shock protein (HSP20) family
AAV29_RS03895	COG1263	PTS System
AAV29_RS03895	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AAV29_RS03900	COG0366	Alpha amylase catalytic
AAV29_RS03905	COG2188	Transcriptional regulator
AAV29_RS03910	COG0778	Nitroreductase
AAV29_RS03925	COG0737	Belongs to the 5'-nucleotidase family
AAV29_RS03930	COG0693	protein deglycase activity
AAV29_RS03935	COG1609	Transcriptional regulator
AAV29_RS03950	COG2814	Major facilitator Superfamily
AAV29_RS03960	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AAV29_RS03965	COG4980	gas vesicle protein
AAV29_RS03970	COG1295	ribonuclease BN
AAV29_RS03975	COG0477	Major facilitator Superfamily
AAV29_RS03980	COG0387	Pfam Sodium calcium exchanger
AAV29_RS03990	COG0668	transmembrane transport
AAV29_RS03995	COG0535	radical SAM domain protein
AAV29_RS04005	COG0726	polysaccharide deacetylase
AAV29_RS04010	COG2084	Dehydrogenase
AAV29_RS04020	COG0598	Magnesium transport protein CorA
AAV29_RS04025	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
AAV29_RS04030	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AAV29_RS04040	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AAV29_RS04045	COG4637	Psort location Cytoplasmic, score
AAV29_RS04050	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AAV29_RS04055	COG0022	dehydrogenase e1 component
AAV29_RS04060	COG0508	dehydrogenase complex catalyzes the overall conversion of
AAV29_RS04065	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AAV29_RS04070	COG3284	Transcriptional regulator
AAV29_RS04080	COG1486	melibiose metabolic process
AAV29_RS04085	COG1737	Transcriptional regulator
AAV29_RS04090	COG1263	PTS System
AAV29_RS04090	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AAV29_RS04095	COG1132	(ABC) transporter
AAV29_RS04100	COG1132	(ABC) transporter
AAV29_RS04105	COG2259	Doxx family
AAV29_RS04110	COG2514	catechol 2,3-dioxygenase activity
AAV29_RS04120	COG1695	Transcriptional regulator
AAV29_RS04125	COG2249	NAD(P)H dehydrogenase (quinone) activity
AAV29_RS04130	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
AAV29_RS04135	COG0574	Belongs to the PEP-utilizing enzyme family
AAV29_RS04135	COG3848	Pyruvate phosphate dikinase
AAV29_RS04140	COG2732	(Barnase) inhibitor
AAV29_RS04145	COG2318	DinB family
AAV29_RS04150	COG2814	Major facilitator Superfamily
AAV29_RS04155	COG1846	Transcriptional regulator
AAV29_RS04160	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AAV29_RS04160	COG0392	lysyltransferase activity
AAV29_RS04165	COG0384	phenazine biosynthesis protein PhzF
AAV29_RS04170	COG0778	Nitroreductase
AAV29_RS04180	COG1090	epimerase
AAV29_RS04195	COG2814	Major facilitator Superfamily
AAV29_RS04205	COG3591	Belongs to the peptidase S1B family
AAV29_RS04220	COG3103	Sh3 type 3 domain protein
AAV29_RS04225	COG5658	integral membrane protein
AAV29_RS04230	COG0596	Alpha beta hydrolase
AAV29_RS04235	COG0463	Glycosyl transferase, family 2
AAV29_RS04240	COG4485	Bacterial membrane protein, YfhO
AAV29_RS04245	COG1988	membrane-bound metal-dependent
AAV29_RS04250	COG1194	a g-specific adenine glycosylase
AAV29_RS04260	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS04280	COG1132	(ABC) transporter
AAV29_RS04285	COG4129	membrane
AAV29_RS04295	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AAV29_RS04300	COG0735	belongs to the Fur family
AAV29_RS04415	COG3340	Belongs to the peptidase S51 family
AAV29_RS04425	COG0277	FAD linked oxidase domain protein
AAV29_RS04435	COG0747	negative chemotaxis
AAV29_RS04440	COG0601	transmembrane transport
AAV29_RS04445	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AAV29_RS04450	COG0444	Belongs to the ABC transporter superfamily
AAV29_RS04455	COG4608	Belongs to the ABC transporter superfamily
AAV29_RS04460	COG0753	catalase activity
AAV29_RS04470	COG1116	anion transmembrane transporter activity
AAV29_RS04475	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AAV29_RS04480	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AAV29_RS04500	COG1476	TRANSCRIPTIONal
AAV29_RS04510	COG3382	B3 4 domain protein
AAV29_RS04515	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AAV29_RS04525	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AAV29_RS04530	COG0789	Transcriptional regulator
AAV29_RS04535	COG1664	Polymer-forming cytoskeletal
AAV29_RS04540	COG1664	Polymer-forming cytoskeletal
AAV29_RS04545	COG2766	serine protein kinase
AAV29_RS04555	COG1846	Transcriptional regulator
AAV29_RS04560	COG1566	PFAM secretion protein HlyD family protein
AAV29_RS04565	COG2814	Major facilitator Superfamily
AAV29_RS04570	COG0655	NAD(P)H dehydrogenase (quinone) activity
AAV29_RS04585	COG1725	Transcriptional regulator
AAV29_RS04590	COG1131	(ABC) transporter
AAV29_RS04595	COG1131	(ABC) transporter
AAV29_RS04600	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
AAV29_RS04605	COG1278	Cold shock
AAV29_RS04610	COG1464	Belongs to the NlpA lipoprotein family
AAV29_RS04615	COG3706	GGDEF domain
AAV29_RS04620	COG1823	symporter activity
AAV29_RS04640	COG5577	PFAM Coat F domain
AAV29_RS04645	COG4085	toxin activity
AAV29_RS04645	COG1525	nuclease
AAV29_RS04645	COG0737	Belongs to the 5'-nucleotidase family
AAV29_RS04650	COG3764	Sortase (surface protein transpeptidase)
AAV29_RS04655	COG0564	pseudouridine synthase activity
AAV29_RS04665	COG0517	IMP dehydrogenase activity
AAV29_RS04670	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AAV29_RS04675	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AAV29_RS04675	COG3153	acetyltransferase
AAV29_RS04680	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AAV29_RS04685	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
AAV29_RS04690	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AAV29_RS04700	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AAV29_RS04705	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AAV29_RS04710	COG4585	Histidine kinase
AAV29_RS04710	COG2203	Gaf domain
AAV29_RS04715	COG2197	response regulator
AAV29_RS04720	COG0431	NADPH-dependent FMN reductase
AAV29_RS04735	COG1388	LysM domain
AAV29_RS04735	COG0791	NLP P60 protein
AAV29_RS04740	COG1959	2 iron, 2 sulfur cluster binding
AAV29_RS04745	COG0668	transmembrane transport
AAV29_RS04750	COG2719	SpoVR family
AAV29_RS04755	COG1785	Belongs to the alkaline phosphatase family
AAV29_RS04760	COG0791	NLP P60 protein
AAV29_RS04760	COG1388	LysM domain
AAV29_RS04765	COG0583	DNA-binding transcription factor activity
AAV29_RS04770	COG0372	Belongs to the citrate synthase family
AAV29_RS04775	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS04780	COG0531	amino acid
AAV29_RS04785	COG0733	neurotransmitter:sodium symporter activity
AAV29_RS04800	COG1595	DNA-templated transcription, initiation
AAV29_RS04805	COG0204	Acyl-transferase
AAV29_RS04810	COG1253	flavin adenine dinucleotide binding
AAV29_RS04815	COG0789	Transcriptional regulator
AAV29_RS04820	COG0436	Aminotransferase
AAV29_RS04825	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AAV29_RS04830	COG1253	flavin adenine dinucleotide binding
AAV29_RS04835	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AAV29_RS04840	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AAV29_RS04845	COG0584	glycerophosphoryl diester phosphodiesterase
AAV29_RS04850	COG0668	transmembrane transport
AAV29_RS04855	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AAV29_RS04860	COG0726	polysaccharide deacetylase
AAV29_RS04865	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AAV29_RS04870	COG3226	Transcriptional regulator
AAV29_RS04880	COG0589	response to stress
AAV29_RS04885	COG1132	(ABC) transporter
AAV29_RS04890	COG1132	(ABC) transporter
AAV29_RS04895	COG0702	epimerase
AAV29_RS04910	COG0189	ligase activity
AAV29_RS04915	COG0189	ligase activity
AAV29_RS04930	COG4335	DNA alkylation repair
AAV29_RS04935	COG0561	phosphatase activity
AAV29_RS04940	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AAV29_RS04950	COG0475	glutathione-regulated potassium exporter activity
AAV29_RS04955	COG0490	domain, Protein
AAV29_RS04965	COG1024	Enoyl-CoA hydratase
AAV29_RS04975	COG4152	abc transporter atp-binding protein
AAV29_RS04980	COG1668	transmembrane transport
AAV29_RS04985	COG0420	3'-5' exonuclease activity
AAV29_RS04990	COG4717	serine-type aminopeptidase activity
AAV29_RS05005	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AAV29_RS05040	COG4980	gas vesicle protein
AAV29_RS05055	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
AAV29_RS05060	COG0537	adenosine 5'-monophosphoramidase activity
AAV29_RS05065	COG1131	(ABC) transporter
AAV29_RS05070	COG4473	ABC transporter
AAV29_RS05085	COG3069	C4-dicarboxylate transmembrane transporter activity
AAV29_RS05090	COG2329	Antibiotic biosynthesis monooxygenase
AAV29_RS05095	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AAV29_RS05105	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AAV29_RS05110	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
AAV29_RS05115	COG1309	transcriptional regulator
AAV29_RS05120	COG1511	domain protein
AAV29_RS05125	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AAV29_RS05135	COG1363	Peptidase, m42
AAV29_RS05140	COG1301	dicarboxylic acid transport
AAV29_RS05145	COG1234	tRNA 3'-trailer cleavage
AAV29_RS05150	COG0095	Lipoate-protein ligase
AAV29_RS05155	COG0702	epimerase
AAV29_RS05160	COG0318	PFAM AMP-dependent synthetase and ligase
AAV29_RS05170	COG0501	Belongs to the peptidase M48B family
AAV29_RS05175	COG1404	Belongs to the peptidase S8 family
AAV29_RS05185	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
AAV29_RS05190	COG0406	alpha-ribazole phosphatase activity
AAV29_RS05195	COG0183	Belongs to the thiolase family
AAV29_RS05200	COG0318	PFAM AMP-dependent synthetase and ligase
AAV29_RS05205	COG1268	BioY protein
AAV29_RS05210	COG0840	transmembrane signaling receptor activity
AAV29_RS05215	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AAV29_RS05215	COG0723	plastoquinol--plastocyanin reductase activity
AAV29_RS05220	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS05230	COG4903	ComK protein
AAV29_RS05240	COG5646	InterPro IPR014922
AAV29_RS05260	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AAV29_RS05275	COG0398	Pfam SNARE associated Golgi protein
AAV29_RS05280	COG0681	Belongs to the peptidase S26 family
AAV29_RS05285	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AAV29_RS05290	COG1846	Transcriptional regulator
AAV29_RS05295	COG3180	Ammonia monooxygenase
AAV29_RS05300	COG2814	Major facilitator Superfamily
AAV29_RS05310	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
AAV29_RS05315	COG2323	membrane
AAV29_RS05330	COG0420	3'-5' exonuclease activity
AAV29_RS05335	COG0419	ATPase involved in DNA repair
AAV29_RS05340	COG1403	HNH endonuclease
AAV29_RS05380	COG0179	Fumarylacetoacetate (FAA) hydrolase
AAV29_RS05400	COG0367	asparagine synthase
AAV29_RS05405	COG1562	ergosterol biosynthetic process
AAV29_RS05410	COG0534	Mate efflux family protein
AAV29_RS05415	COG1917	Cupin 2, conserved barrel domain protein
AAV29_RS05415	COG2207	Transcriptional regulator
AAV29_RS05420	COG1609	Transcriptional regulator
AAV29_RS05425	COG0673	inositol 2-dehydrogenase activity
AAV29_RS05430	COG2318	DinB family
AAV29_RS05435	COG1357	PFAM Pentapeptide repeats (8 copies)
AAV29_RS05440	COG2153	protein acetylation
AAV29_RS05445	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
AAV29_RS05445	COG0646	methionine synthase
AAV29_RS05455	COG2996	Protein conserved in bacteria
AAV29_RS05460	COG1744	ABC transporter substrate-binding protein PnrA-like
AAV29_RS05465	COG0840	transmembrane signaling receptor activity
AAV29_RS05470	COG1307	EDD domain protein, DegV family
AAV29_RS05475	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AAV29_RS05490	COG0561	phosphatase activity
AAV29_RS05495	COG1073	alpha beta
AAV29_RS05500	COG2151	metal-sulfur cluster biosynthetic enzyme
AAV29_RS05510	COG0277	FAD linked oxidase domain protein
AAV29_RS05515	COG2271	Major facilitator Superfamily
AAV29_RS05525	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
AAV29_RS05535	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AAV29_RS05540	COG0505	Belongs to the CarA family
AAV29_RS05545	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AAV29_RS05550	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AAV29_RS05570	COG2267	carboxylic ester hydrolase activity
AAV29_RS05580	COG1744	ABC transporter substrate-binding protein PnrA-like
AAV29_RS05595	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AAV29_RS05600	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AAV29_RS05605	COG5504	Zn-dependent protease
AAV29_RS05610	COG0444	Belongs to the ABC transporter superfamily
AAV29_RS05615	COG4608	Belongs to the ABC transporter superfamily
AAV29_RS05625	COG0601	transmembrane transport
AAV29_RS05630	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AAV29_RS05650	COG0180	Tryptophanyl-tRNA synthetase
AAV29_RS05655	COG4166	transmembrane transport
AAV29_RS05660	COG0601	transmembrane transport
AAV29_RS05665	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AAV29_RS05670	COG0444	Belongs to the ABC transporter superfamily
AAV29_RS05675	COG4608	Belongs to the ABC transporter superfamily
AAV29_RS05685	COG0456	acetyltransferase
AAV29_RS05690	COG1393	Belongs to the ArsC family
AAV29_RS05695	COG0861	Integral membrane protein TerC family
AAV29_RS05700	COG4862	establishment of competence for transformation
AAV29_RS05705	COG4469	Competence protein
AAV29_RS05710	COG1164	Oligoendopeptidase f
AAV29_RS05720	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
AAV29_RS05725	COG2346	COG2346, Truncated hemoglobins
AAV29_RS05730	COG0741	lytic transglycosylase activity
AAV29_RS05735	COG4116	CYTH
AAV29_RS05745	COG2357	RelA SpoT domain protein
AAV29_RS05750	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AAV29_RS05755	COG0564	pseudouridine synthase activity
AAV29_RS05765	COG0569	domain protein
AAV29_RS05765	COG0475	glutathione-regulated potassium exporter activity
AAV29_RS05770	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AAV29_RS05775	COG0352	thiamine-phosphate diphosphorylase activity
AAV29_RS05780	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AAV29_RS05785	COG2104	thiamine diphosphate biosynthetic process
AAV29_RS05795	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AAV29_RS05800	COG0351	phosphomethylpyrimidine kinase
AAV29_RS05805	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AAV29_RS05860	COG0210	DNA helicase
AAV29_RS05880	COG1131	(ABC) transporter
AAV29_RS05890	COG2153	protein acetylation
AAV29_RS05900	COG2382	esterase
AAV29_RS05905	COG0626	cystathionine gamma-synthase activity
AAV29_RS05910	COG0626	cystathionine gamma-synthase activity
AAV29_RS05925	COG5444	nuclease activity
AAV29_RS05935	COG0346	lactoylglutathione lyase activity
AAV29_RS05940	COG2367	Beta-lactamase
AAV29_RS05945	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AAV29_RS05955	COG1846	Transcriptional regulator
AAV29_RS05965	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
AAV29_RS05970	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AAV29_RS05975	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AAV29_RS05980	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AAV29_RS05980	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AAV29_RS05985	COG1447	Phosphotransferase system cellobiose-specific component IIA
AAV29_RS05995	COG1349	DNA-binding transcription factor activity
AAV29_RS06015	COG1285	pathogenesis
AAV29_RS06020	COG2205	protein histidine kinase activity
AAV29_RS06030	COG3383	formate dehydrogenase (NAD+) activity
AAV29_RS06035	COG2427	Protein of unknown function (DUF1641)
AAV29_RS06040	COG2124	cytochrome p450
AAV29_RS06045	COG1819	glycosyl
AAV29_RS06055	COG1587	Uroporphyrinogen-III synthase
AAV29_RS06060	COG0390	transport system, permease component
AAV29_RS06065	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AAV29_RS06070	COG0697	spore germination
AAV29_RS06075	COG4297	protein containing double-stranded beta helix domain
AAV29_RS06085	COG1252	NADH dehydrogenase
AAV29_RS06095	COG2211	Major facilitator Superfamily
AAV29_RS06100	COG1609	Transcriptional regulator
AAV29_RS06105	COG0246	Mannitol dehydrogenase
AAV29_RS06110	COG2721	sulfolactate sulfo-lyase activity
AAV29_RS06115	COG0730	response to heat
AAV29_RS06120	COG2318	DinB family
AAV29_RS06125	COG0457	Tetratricopeptide repeat
AAV29_RS06135	COG5632	N-Acetylmuramoyl-L-alanine amidase
AAV29_RS06135	COG1388	LysM domain
AAV29_RS06135	COG3409	Peptidoglycan-binding domain 1 protein
AAV29_RS06145	COG4195	phage-related replication protein
AAV29_RS06150	COG2856	Zn peptidase
AAV29_RS06155	COG1396	sequence-specific DNA binding
AAV29_RS06165	COG1522	sequence-specific DNA binding
AAV29_RS06170	COG1484	DNA-dependent DNA replication
AAV29_RS06185	COG1595	DNA-templated transcription, initiation
AAV29_RS06190	COG5484	DNA packaging
AAV29_RS06190	COG3728	DNA packaging
AAV29_RS06195	COG1783	phage Terminase large subunit
AAV29_RS06200	COG5518	Phage portal protein
AAV29_RS06205	COG0338	D12 class N6 adenine-specific DNA methyltransferase
AAV29_RS06210	COG4653	Phage capsid family
AAV29_RS06255	COG5412	phage tail tape measure protein
AAV29_RS06255	COG3953	SLT domain
AAV29_RS06255	COG5412	phage tail tape measure protein
AAV29_RS06255	COG5412	phage tail tape measure protein
AAV29_RS06255	COG3953	SLT domain
AAV29_RS06255	COG3953	SLT domain
AAV29_RS06260	COG1652	LysM domain
AAV29_RS06265	COG4193	domain, Protein
AAV29_RS06275	COG3628	GPW Gp25 family protein
AAV29_RS06280	COG3299	homolog of phage Mu protein gp47
AAV29_RS06285	COG3778	Protein conserved in bacteria
AAV29_RS06325	COG5632	N-Acetylmuramoyl-L-alanine amidase
AAV29_RS06325	COG3409	Peptidoglycan-binding domain 1 protein
AAV29_RS06340	COG0306	phosphate transporter
AAV29_RS06345	COG1392	Phosphate transport regulator
AAV29_RS06350	COG0531	amino acid
AAV29_RS06355	COG0346	lactoylglutathione lyase activity
AAV29_RS06360	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AAV29_RS06365	COG0463	Glycosyl transferase, family 2
AAV29_RS06370	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AAV29_RS06375	COG0477	Major facilitator Superfamily
AAV29_RS06380	COG2362	D-Aminopeptidase
AAV29_RS06385	COG0601	transmembrane transport
AAV29_RS06390	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AAV29_RS06395	COG0444	Belongs to the ABC transporter superfamily
AAV29_RS06400	COG4166	transmembrane transport
AAV29_RS06405	COG1619	proteins homologs of microcin C7 resistance protein MccF
AAV29_RS06410	COG4948	Mandelate Racemase Muconate Lactonizing
AAV29_RS06415	COG0791	NLP P60 protein
AAV29_RS06420	COG4608	Belongs to the ABC transporter superfamily
AAV29_RS06425	COG2706	6-phosphogluconolactonase activity
AAV29_RS06430	COG1834	amidinotransferase
AAV29_RS06435	COG1607	acyl-coa hydrolase
AAV29_RS06440	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AAV29_RS06445	COG2076	Multidrug Resistance protein
AAV29_RS06450	COG2076	Multidrug Resistance protein
AAV29_RS06455	COG0788	formyltetrahydrofolate deformylase activity
AAV29_RS06460	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AAV29_RS06470	COG1764	response to oxidative stress
AAV29_RS06475	COG1846	Transcriptional regulator
AAV29_RS06480	COG1764	response to oxidative stress
AAV29_RS06495	COG0457	Tetratricopeptide repeat
AAV29_RS06495	COG0463	Glycosyl transferase, family 2
AAV29_RS06505	COG2814	Major facilitator Superfamily
AAV29_RS06510	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AAV29_RS06520	COG1404	Belongs to the peptidase S8 family
AAV29_RS06525	COG1366	Belongs to the anti-sigma-factor antagonist family
AAV29_RS06530	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AAV29_RS06535	COG1122	ATPase activity
AAV29_RS06540	COG4721	ABC-type cobalt transport system, permease component
AAV29_RS06545	COG3858	chitin binding
AAV29_RS06545	COG1388	LysM domain
AAV29_RS06550	COG2239	Acts as a magnesium transporter
AAV29_RS06555	COG0789	Transcriptional regulator
AAV29_RS06565	COG1846	Transcriptional regulator
AAV29_RS06570	COG0726	polysaccharide deacetylase
AAV29_RS06575	COG1793	dna ligase
AAV29_RS06575	COG3285	dna ligase
AAV29_RS06580	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
AAV29_RS06590	COG0586	Pfam SNARE associated Golgi protein
AAV29_RS06595	COG0861	Integral membrane protein TerC family
AAV29_RS06600	COG1191	sigma factor activity
AAV29_RS06625	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AAV29_RS06630	COG2323	membrane
AAV29_RS06635	COG3594	Acyltransferase
AAV29_RS06640	COG5002	protein histidine kinase activity
AAV29_RS06645	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AAV29_RS06660	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AAV29_RS06665	COG0436	Aminotransferase
AAV29_RS06695	COG3852	Histidine kinase
AAV29_RS06700	COG1846	Transcriptional regulator
AAV29_RS06705	COG1360	Flagellar Motor Protein
AAV29_RS06710	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AAV29_RS06715	COG0542	response to heat
AAV29_RS06720	COG3949	Membrane
AAV29_RS06735	COG0720	synthase
AAV29_RS06740	COG0602	queuosine metabolic process
AAV29_RS06755	COG4873	Protein conserved in bacteria
AAV29_RS06765	COG3773	Cell wall hydrolase
AAV29_RS06770	COG2244	polysaccharide biosynthetic process
AAV29_RS06775	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AAV29_RS06780	COG2217	Heavy metal translocating P-type atpase
AAV29_RS06785	COG0006	proline dipeptidase activity
AAV29_RS06790	COG1609	Transcriptional regulator
AAV29_RS06795	COG3711	transcriptional antiterminator
AAV29_RS06800	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AAV29_RS06800	COG2190	(PTS) system
AAV29_RS06800	COG1263	PTS System
AAV29_RS06805	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AAV29_RS06810	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AAV29_RS06820	COG1533	DNA photolyase activity
AAV29_RS06825	COG0840	transmembrane signaling receptor activity
AAV29_RS06830	COG2084	Dehydrogenase
AAV29_RS06835	COG2340	Cysteine-rich secretory protein family
AAV29_RS06840	COG0768	penicillin binding
AAV29_RS06845	COG4191	Histidine kinase
AAV29_RS06850	COG0436	Aminotransferase
AAV29_RS06855	COG0784	Response regulator, receiver
AAV29_RS06855	COG0835	chemotaxis
AAV29_RS06865	COG2814	Major facilitator Superfamily
AAV29_RS06870	COG1376	ErfK ybiS ycfS ynhG family protein
AAV29_RS06875	COG1408	metallophosphoesterase
AAV29_RS06880	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS06890	COG2200	EAL domain
AAV29_RS06895	COG4703	Protein of unknown function (DUF1797)
AAV29_RS06900	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
AAV29_RS06910	COG0517	IMP dehydrogenase activity
AAV29_RS06915	COG0583	DNA-binding transcription factor activity
AAV29_RS06920	COG0716	FMN binding
AAV29_RS06930	COG0716	FMN binding
AAV29_RS06950	COG0668	transmembrane transport
AAV29_RS06955	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AAV29_RS06975	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AAV29_RS06980	COG0303	'Molybdopterin
AAV29_RS06985	COG1763	Mo-molybdopterin cofactor biosynthetic process
AAV29_RS06990	COG0314	molybdopterin synthase activity
AAV29_RS06995	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
AAV29_RS07005	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AAV29_RS07010	COG1136	(ABC) transporter
AAV29_RS07015	COG0577	efflux transmembrane transporter activity
AAV29_RS07020	COG1349	DNA-binding transcription factor activity
AAV29_RS07025	COG1105	Belongs to the carbohydrate kinase PfkB family
AAV29_RS07030	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AAV29_RS07030	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AAV29_RS07030	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AAV29_RS07035	COG0681	Belongs to the peptidase S26 family
AAV29_RS07045	COG0488	(ABC) transporter
AAV29_RS07050	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AAV29_RS07055	COG2309	aminopeptidase activity
AAV29_RS07060	COG1077	Cell shape determining protein MreB Mrl
AAV29_RS07070	COG2002	toxin-antitoxin pair type II binding
AAV29_RS07075	COG3852	Histidine kinase
AAV29_RS07080	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
AAV29_RS07080	COG2105	PFAM AIG2 family protein
AAV29_RS07085	COG0569	domain protein
AAV29_RS07095	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AAV29_RS07105	COG0561	phosphatase activity
AAV29_RS07110	COG0242	peptide deformylase activity
AAV29_RS07120	COG0497	DNA recombination
AAV29_RS07130	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS07130	COG4221	oxidoreductase activity
AAV29_RS07130	COG3321	synthase
AAV29_RS07130	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS07135	COG0300	oxidoreductase activity
AAV29_RS07135	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AAV29_RS07135	COG3321	synthase
AAV29_RS07135	COG4221	oxidoreductase activity
AAV29_RS07140	COG3321	synthase
AAV29_RS07140	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS07140	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS07140	COG4221	oxidoreductase activity
AAV29_RS07145	COG3321	synthase
AAV29_RS07145	COG4221	oxidoreductase activity
AAV29_RS07145	COG0300	oxidoreductase activity
AAV29_RS07145	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AAV29_RS07150	COG0300	oxidoreductase activity
AAV29_RS07150	COG3321	synthase
AAV29_RS07150	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AAV29_RS07150	COG4221	oxidoreductase activity
AAV29_RS07155	COG0300	oxidoreductase activity
AAV29_RS07155	COG4221	oxidoreductase activity
AAV29_RS07155	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AAV29_RS07155	COG3321	synthase
AAV29_RS07160	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS07160	COG3321	synthase
AAV29_RS07160	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS07160	COG4221	oxidoreductase activity
AAV29_RS07165	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AAV29_RS07170	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AAV29_RS07175	COG0022	dehydrogenase e1 component
AAV29_RS07180	COG0508	dehydrogenase complex catalyzes the overall conversion of
AAV29_RS07185	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AAV29_RS07190	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AAV29_RS07200	COG1982	Orn Lys Arg decarboxylase major
AAV29_RS07220	COG0483	inositol monophosphate 1-phosphatase activity
AAV29_RS07230	COG3227	Zinc metalloprotease (Elastase)
AAV29_RS07250	COG1217	gtp-binding protein TYPA
AAV29_RS07260	COG4896	Protein conserved in bacteria
AAV29_RS07270	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
AAV29_RS07275	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AAV29_RS07280	COG2066	Belongs to the glutaminase family
AAV29_RS07290	COG0772	Belongs to the SEDS family
AAV29_RS07295	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
AAV29_RS07310	COG2010	Cytochrome c
AAV29_RS07310	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AAV29_RS07315	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AAV29_RS07320	COG1845	cytochrome c oxidase, subunit III
AAV29_RS07325	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AAV29_RS07330	COG3336	cytochrome c oxidase
AAV29_RS07340	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
AAV29_RS07345	COG2340	Cysteine-rich secretory protein family
AAV29_RS07360	COG3679	Belongs to the UPF0342 family
AAV29_RS07375	COG0742	ribosomal rna small subunit methyltransferase
AAV29_RS07385	COG3314	Sporulation integral membrane protein YlbJ
AAV29_RS07390	COG1752	Esterase of the alpha-beta hydrolase superfamily
AAV29_RS07395	COG3480	Lon protease (S16) C-terminal proteolytic domain
AAV29_RS07405	COG1399	metal-binding, possibly nucleic acid-binding protein
AAV29_RS07420	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AAV29_RS07440	COG4839	cell division protein FtsL
AAV29_RS07445	COG0768	penicillin binding
AAV29_RS07450	COG0768	penicillin binding
AAV29_RS07470	COG0772	Belongs to the SEDS family
AAV29_RS07485	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AAV29_RS07490	COG0849	cell division
AAV29_RS07495	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AAV29_RS07500	COG1404	Belongs to the peptidase S8 family
AAV29_RS07500	COG4412	M6 family metalloprotease domain protein
AAV29_RS07510	COG1191	sigma factor activity
AAV29_RS07515	COG1191	sigma factor activity
AAV29_RS07520	COG1119	ATPase activity
AAV29_RS07525	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AAV29_RS07530	COG1873	PFAM PRC-barrel domain
AAV29_RS07535	COG1496	oxidoreductase activity
AAV29_RS07540	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AAV29_RS07550	COG0762	integral membrane protein
AAV29_RS07555	COG2302	S4 RNA-binding domain
AAV29_RS07560	COG3599	regulation of cell shape
AAV29_RS07570	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AAV29_RS07575	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AAV29_RS07585	COG0564	pseudouridine synthase activity
AAV29_RS07595	COG2233	PERMEase
AAV29_RS07605	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AAV29_RS07610	COG0505	Belongs to the CarA family
AAV29_RS07615	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AAV29_RS07630	COG0284	orotidine-5'-phosphate decarboxylase activity
AAV29_RS07635	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AAV29_RS07645	COG0306	phosphate transporter
AAV29_RS07660	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AAV29_RS07665	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
AAV29_RS07670	COG1648	precorrin-2 dehydrogenase activity
AAV29_RS07680	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AAV29_RS07685	COG1561	YicC-like family, N-terminal region
AAV29_RS07695	COG0194	GDP metabolic process
AAV29_RS07705	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AAV29_RS07710	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AAV29_RS07715	COG0242	peptide deformylase activity
AAV29_RS07725	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AAV29_RS07725	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AAV29_RS07735	COG0631	protein serine/threonine phosphatase activity
AAV29_RS07740	COG2815	serine threonine protein kinase
AAV29_RS07740	COG0515	serine threonine protein kinase
AAV29_RS07750	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AAV29_RS07755	COG1564	THIamine pyrophosphokinase
AAV29_RS07770	COG1302	Protein conserved in bacteria
AAV29_RS07775	COG1461	Dihydroxyacetone kinase
AAV29_RS07780	COG1760	l-serine dehydratase
AAV29_RS07785	COG1760	l-serine dehydratase
AAV29_RS07790	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AAV29_RS07805	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AAV29_RS07810	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS07825	COG1196	nuclear chromosome segregation
AAV29_RS07830	COG0552	protein localization to endoplasmic reticulum
AAV29_RS07845	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AAV29_RS07855	COG1837	Belongs to the UPF0109 family
AAV29_RS07880	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AAV29_RS07895	COG2257	FlhB HrpN YscU SpaS Family
AAV29_RS07905	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AAV29_RS07910	COG0758	DNA mediated transformation
AAV29_RS07915	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AAV29_RS07925	COG4974	Belongs to the 'phage' integrase family
AAV29_RS07945	COG1815	bacterial-type flagellum-dependent cell motility
AAV29_RS07950	COG1558	bacterial-type flagellum-dependent cell motility
AAV29_RS07955	COG1677	Flagellar hook-basal body complex protein FliE
AAV29_RS07960	COG1766	The M ring may be actively involved in energy transduction
AAV29_RS07965	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AAV29_RS07970	COG1317	bacterial-type flagellum organization
AAV29_RS07975	COG1157	protein secretion by the type III secretion system
AAV29_RS07980	COG2882	bacterial-type flagellum organization
AAV29_RS07985	COG3334	PFAM MgtE intracellular
AAV29_RS07990	COG3144	bacterial-type flagellum assembly
AAV29_RS07995	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
AAV29_RS08000	COG4786	Flagellar basal body rod
AAV29_RS08005	COG1582	Flagellar protein (FlbD)
AAV29_RS08010	COG1580	Controls the rotational direction of flagella during chemotaxis
AAV29_RS08015	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AAV29_RS08020	COG1776	CheC inhibitor of MCP methylation
AAV29_RS08020	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AAV29_RS08025	COG2201	protein-glutamate methylesterase activity
AAV29_RS08030	COG3190	flagellar
AAV29_RS08035	COG1338	Plays a role in the flagellum-specific transport system
AAV29_RS08040	COG1987	bacterial-type flagellum assembly
AAV29_RS08045	COG1684	flagellar biosynthetic protein fliR
AAV29_RS08050	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AAV29_RS08055	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AAV29_RS08060	COG1419	protein localization to endoplasmic reticulum
AAV29_RS08065	COG0455	bacterial-type flagellum organization
AAV29_RS08070	COG2201	protein-glutamate methylesterase activity
AAV29_RS08075	COG2198	Histidine kinase
AAV29_RS08075	COG0643	Histidine kinase
AAV29_RS08080	COG0835	chemotaxis
AAV29_RS08085	COG1776	CheC inhibitor of MCP methylation
AAV29_RS08095	COG1191	sigma factor activity
AAV29_RS08125	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AAV29_RS08130	COG4589	Belongs to the CDS family
AAV29_RS08140	COG0750	zinc metalloprotease
AAV29_RS08150	COG2176	DNA-directed DNA polymerase activity
AAV29_RS08160	COG0195	Participates in both transcription termination and antitermination
AAV29_RS08165	COG2740	Nucleic-acid-binding protein implicated in transcription termination
AAV29_RS08170	COG1358	cellular component organization or biogenesis
AAV29_RS08180	COG1550	Protein conserved in bacteria
AAV29_RS08195	COG0196	riboflavin kinase activity
AAV29_RS08210	COG0726	polysaccharide deacetylase
AAV29_RS08215	COG0612	Peptidase, M16
AAV29_RS08220	COG1873	PFAM PRC-barrel domain
AAV29_RS08225	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AAV29_RS08230	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AAV29_RS08235	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AAV29_RS08240	COG0527	aspartate kinase activity
AAV29_RS08250	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AAV29_RS08255	COG0740	serine-type endopeptidase activity
AAV29_RS08265	COG1674	ftsk spoiiie
AAV29_RS08265	COG4980	gas vesicle protein
AAV29_RS08270	COG2188	Transcriptional regulator
AAV29_RS08275	COG2814	Major facilitator Superfamily
AAV29_RS08280	COG1846	Transcriptional regulator
AAV29_RS08285	COG1033	growth of symbiont in host cell
AAV29_RS08285	COG2409	Drug exporters of the RND superfamily
AAV29_RS08290	COG0612	Peptidase, M16
AAV29_RS08295	COG0612	Peptidase, M16
AAV29_RS08300	COG0300	oxidoreductase activity
AAV29_RS08315	COG1426	Protein conserved in bacteria
AAV29_RS08320	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AAV29_RS08335	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AAV29_RS08345	COG1692	metallophosphoesterase
AAV29_RS08350	COG2359	stage V sporulation protein S
AAV29_RS08370	COG4550	Control of competence regulator ComK, YlbF/YmcA
AAV29_RS08415	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AAV29_RS08420	COG3425	synthase
AAV29_RS08425	COG1024	Enoyl-CoA hydratase
AAV29_RS08430	COG1024	Enoyl-CoA hydratase
AAV29_RS08435	COG3321	synthase
AAV29_RS08435	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS08435	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS08435	COG0318	PFAM AMP-dependent synthetase and ligase
AAV29_RS08435	COG0300	oxidoreductase activity
AAV29_RS08440	COG4221	oxidoreductase activity
AAV29_RS08440	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AAV29_RS08440	COG0300	oxidoreductase activity
AAV29_RS08440	COG3321	synthase
AAV29_RS08445	COG3321	synthase
AAV29_RS08445	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AAV29_RS08445	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS08445	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS08445	COG3321	synthase
AAV29_RS08445	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AAV29_RS08445	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AAV29_RS08445	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS08445	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS08445	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AAV29_RS08450	COG4221	oxidoreductase activity
AAV29_RS08450	COG3321	synthase
AAV29_RS08450	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS08450	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS08455	COG3321	synthase
AAV29_RS08455	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
AAV29_RS08455	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AAV29_RS08455	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AAV29_RS08460	COG2124	cytochrome p450
AAV29_RS08465	COG3209	COG3209 Rhs family protein
AAV29_RS08470	COG3619	membrane
AAV29_RS08480	COG1404	Belongs to the peptidase S8 family
AAV29_RS08490	COG4195	phage-related replication protein
AAV29_RS08495	COG1764	response to oxidative stress
AAV29_RS08505	COG2076	Multidrug Resistance protein
AAV29_RS08545	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AAV29_RS08550	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AAV29_RS08555	COG4112	unkown
AAV29_RS08560	COG0860	N-Acetylmuramoyl-L-alanine amidase
AAV29_RS08570	COG0464	growth
AAV29_RS08575	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AAV29_RS08580	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
AAV29_RS08585	COG0789	Transcriptional regulator
AAV29_RS08590	COG0174	glutamine synthetase
AAV29_RS08600	COG2211	Major facilitator Superfamily
AAV29_RS08605	COG3507	Belongs to the glycosyl hydrolase 43 family
AAV29_RS08620	COG1070	Carbohydrate kinase
AAV29_RS08625	COG0574	Belongs to the PEP-utilizing enzyme family
AAV29_RS08625	COG3848	Pyruvate phosphate dikinase
AAV29_RS08640	COG2378	regulation of single-species biofilm formation
AAV29_RS08645	COG2318	DinB family
AAV29_RS08650	COG1064	alcohol dehydrogenase
AAV29_RS08685	COG3397	chitin binding
AAV29_RS08695	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AAV29_RS08705	COG5434	Belongs to the glycosyl hydrolase 28 family
AAV29_RS08715	COG0756	dUTP diphosphatase activity
AAV29_RS08720	COG4195	phage-related replication protein
AAV29_RS08755	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AAV29_RS08765	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AAV29_RS08785	COG0785	Cytochrome C biogenesis protein
AAV29_RS08790	COG2201	protein-glutamate methylesterase activity
AAV29_RS08795	COG4846	Membrane protein involved in cytochrome C biogenesis
AAV29_RS08805	COG0071	Belongs to the small heat shock protein (HSP20) family
AAV29_RS08820	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AAV29_RS08825	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AAV29_RS08840	COG0824	Thioesterase
AAV29_RS08850	COG4841	protein insertion into membrane
AAV29_RS08860	COG1832	CoA-binding protein
AAV29_RS08865	COG0187	DNA topoisomerase II activity
AAV29_RS08870	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AAV29_RS08880	COG1115	amino acid carrier protein
AAV29_RS08890	COG1063	alcohol dehydrogenase
AAV29_RS08895	COG0800	Aldolase
AAV29_RS08900	COG1312	Catalyzes the dehydration of D-mannonate
AAV29_RS08905	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS08910	COG1609	Transcriptional regulator
AAV29_RS08950	COG2205	protein histidine kinase activity
AAV29_RS08955	COG0745	RESPONSE REGULATOR receiver
AAV29_RS08965	COG3507	Belongs to the glycosyl hydrolase 43 family
AAV29_RS08990	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS08995	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AAV29_RS09000	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AAV29_RS09005	COG2610	gluconate transmembrane transporter activity
AAV29_RS09010	COG2124	cytochrome p450
AAV29_RS09030	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AAV29_RS09040	COG2246	polysaccharide biosynthetic process
AAV29_RS09045	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AAV29_RS09050	COG0586	Pfam SNARE associated Golgi protein
AAV29_RS09055	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AAV29_RS09060	COG1024	Enoyl-CoA hydratase
AAV29_RS09065	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AAV29_RS09070	COG0511	ligase activity, forming carbon-carbon bonds
AAV29_RS09075	COG0439	Biotin carboxylase
AAV29_RS09080	COG0318	PFAM AMP-dependent synthetase and ligase
AAV29_RS09085	COG1960	acyl-CoA dehydrogenase activity
AAV29_RS09090	COG1649	PFAM Uncharacterised BCR, COG1649
AAV29_RS09100	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS09100	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
AAV29_RS09105	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS09110	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS09115	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS09120	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS09125	COG2027	D-alanyl-D-alanine carboxypeptidase
AAV29_RS09130	COG2017	converts alpha-aldose to the beta-anomer
AAV29_RS09135	COG0534	Mate efflux family protein
AAV29_RS09145	COG5444	nuclease activity
AAV29_RS09160	COG3409	Peptidoglycan-binding domain 1 protein
AAV29_RS09160	COG5632	N-Acetylmuramoyl-L-alanine amidase
AAV29_RS09190	COG5434	Belongs to the glycosyl hydrolase 28 family
AAV29_RS09195	COG1388	LysM domain
AAV29_RS09195	COG1705	Flagellar rod assembly protein muramidase FlgJ
AAV29_RS09270	COG1802	Transcriptional regulator
AAV29_RS09270	COG4626	Terminase
AAV29_RS09310	COG0582	viral genome integration into host DNA
AAV29_RS09315	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
AAV29_RS09400	COG0582	viral genome integration into host DNA
AAV29_RS09405	COG0166	Belongs to the GPI family
AAV29_RS09410	COG0405	Gamma-glutamyltransferase
AAV29_RS09415	COG2814	Major facilitator Superfamily
AAV29_RS09420	COG0640	Transcriptional regulator
AAV29_RS09435	COG0604	alcohol dehydrogenase
AAV29_RS09440	COG0493	'glutamate synthase
AAV29_RS09445	COG0067	glutamate synthase
AAV29_RS09445	COG0070	glutamate synthase
AAV29_RS09445	COG0069	glutamate synthase activity
AAV29_RS09450	COG0583	DNA-binding transcription factor activity
AAV29_RS09455	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AAV29_RS09470	COG0300	oxidoreductase activity
AAV29_RS09475	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
AAV29_RS09485	COG2814	Major facilitator Superfamily
AAV29_RS09490	COG1070	Carbohydrate kinase
AAV29_RS09495	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AAV29_RS09500	COG0243	molybdopterin cofactor binding
AAV29_RS09520	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS09525	COG1733	regulation of RNA biosynthetic process
AAV29_RS09530	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AAV29_RS09535	COG2207	Transcriptional regulator
AAV29_RS09535	COG0662	Cupin 2, conserved barrel domain protein
AAV29_RS09540	COG1309	transcriptional regulator
AAV29_RS09545	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AAV29_RS09555	COG0640	Transcriptional regulator
AAV29_RS09560	COG0741	lytic transglycosylase activity
AAV29_RS09565	COG2322	membrane
AAV29_RS09580	COG1619	proteins homologs of microcin C7 resistance protein MccF
AAV29_RS09590	COG1388	LysM domain
AAV29_RS09590	COG3584	3D domain protein
AAV29_RS09595	COG0514	ATP-dependent DNA helicase (RecQ)
AAV29_RS09600	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AAV29_RS09605	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AAV29_RS09620	COG0071	Belongs to the small heat shock protein (HSP20) family
AAV29_RS09645	COG1012	belongs to the aldehyde dehydrogenase family
AAV29_RS09650	COG1657	PFAM Prenyltransferase squalene oxidase
AAV29_RS09655	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AAV29_RS09660	COG0733	neurotransmitter:sodium symporter activity
AAV29_RS09665	COG0385	Bile acid
AAV29_RS09670	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AAV29_RS09675	COG0508	dehydrogenase complex catalyzes the overall conversion of
AAV29_RS09685	COG4548	von Willebrand factor, type A
AAV29_RS09690	COG0714	Associated with various cellular activities
AAV29_RS09695	COG2032	superoxide dismutase activity
AAV29_RS09700	COG0791	NLP P60 protein
AAV29_RS09700	COG1388	LysM domain
AAV29_RS09705	COG1819	glycosyl
AAV29_RS09710	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
AAV29_RS09715	COG0534	Mate efflux family protein
AAV29_RS09720	COG1366	Belongs to the anti-sigma-factor antagonist family
AAV29_RS09725	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AAV29_RS09730	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AAV29_RS09740	COG2962	Rard protein
AAV29_RS09755	COG1942	4-Oxalocrotonate Tautomerase
AAV29_RS09765	COG1733	regulation of RNA biosynthetic process
AAV29_RS09770	COG0778	Nitroreductase
AAV29_RS09775	COG0400	carboxylic ester hydrolase activity
AAV29_RS09780	COG0346	lactoylglutathione lyase activity
AAV29_RS09790	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AAV29_RS09800	COG2723	6-phospho-beta-galactosidase activity
AAV29_RS09805	COG2188	Transcriptional regulator
AAV29_RS09810	COG0793	Belongs to the peptidase S41A family
AAV29_RS09810	COG3409	Peptidoglycan-binding domain 1 protein
AAV29_RS09815	COG2226	methyltransferase
AAV29_RS09825	COG1876	peptidase activity
AAV29_RS09840	COG0671	phosphoesterase, PA-phosphatase related
AAV29_RS09870	COG1509	lysine 2,3-aminomutase activity
AAV29_RS09875	COG0456	acetyltransferase
AAV29_RS09880	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AAV29_RS09885	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AAV29_RS09890	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AAV29_RS09895	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AAV29_RS09900	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
AAV29_RS09910	COG0456	acetyltransferase
AAV29_RS09915	COG0463	Glycosyl transferase, family 2
AAV29_RS09930	COG4641	Protein conserved in bacteria
AAV29_RS09940	COG1086	Polysaccharide biosynthesis protein
AAV29_RS09985	COG1388	LysM domain
AAV29_RS09990	COG0457	Tetratricopeptide repeat
AAV29_RS10000	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AAV29_RS10015	COG2197	response regulator
AAV29_RS10020	COG4585	Histidine kinase
AAV29_RS10035	COG4282	regulation of fungal-type cell wall biogenesis
AAV29_RS10040	COG1525	nuclease
AAV29_RS10055	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AAV29_RS10075	COG1846	Transcriptional regulator
AAV29_RS10080	COG4698	Protein conserved in bacteria
AAV29_RS10085	COG2755	lipolytic protein G-D-S-L family
AAV29_RS10090	COG1999	signal sequence binding
AAV29_RS10100	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AAV29_RS10105	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AAV29_RS10110	COG1272	protein, Hemolysin III
AAV29_RS10115	COG0204	Acyl-transferase
AAV29_RS10120	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AAV29_RS10135	COG2136	Putative SAM-dependent methyltransferase
AAV29_RS10135	COG2521	methyltransferase
AAV29_RS10150	COG1413	lyase activity
AAV29_RS10155	COG1418	mRNA catabolic process
AAV29_RS10160	COG0386	Belongs to the glutathione peroxidase family
AAV29_RS10170	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AAV29_RS10175	COG1278	Cold shock
AAV29_RS10195	COG0328	RNA-DNA hybrid ribonuclease activity
AAV29_RS10200	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
AAV29_RS10205	COG0328	RNA-DNA hybrid ribonuclease activity
AAV29_RS10215	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AAV29_RS10225	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
AAV29_RS10230	COG1755	Isoprenylcysteine carboxyl methyltransferase
AAV29_RS10235	COG3424	synthase
AAV29_RS10260	COG1335	isochorismatase
AAV29_RS10275	COG3331	DNA recombination
AAV29_RS10320	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AAV29_RS10355	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AAV29_RS10360	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AAV29_RS10395	COG0756	dUTP diphosphatase activity
AAV29_RS10405	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AAV29_RS10420	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AAV29_RS10430	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AAV29_RS10435	COG1372	Participates in initiation and elongation during chromosome replication
AAV29_RS10435	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AAV29_RS10440	COG1780	Probably involved in ribonucleotide reductase function
AAV29_RS10535	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AAV29_RS10545	COG3584	3D domain protein
AAV29_RS10550	COG0587	DNA-directed DNA polymerase activity
AAV29_RS10555	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AAV29_RS10560	COG0358	DNA primase activity
AAV29_RS10565	COG0305	Participates in initiation and elongation during chromosome replication
AAV29_RS10575	COG2887	Belongs to the helicase family. UvrD subfamily
AAV29_RS10590	COG3591	Belongs to the peptidase S1B family
AAV29_RS10605	COG5434	Belongs to the glycosyl hydrolase 28 family
AAV29_RS10605	COG3420	alginic acid biosynthetic process
AAV29_RS10610	COG4195	phage-related replication protein
AAV29_RS10630	COG2135	peptidase activity
AAV29_RS10635	COG1793	dna ligase
AAV29_RS10740	COG3655	Transcriptional regulator
AAV29_RS10830	COG3655	Transcriptional regulator
AAV29_RS10925	COG0776	regulation of translation
AAV29_RS11055	COG0582	viral genome integration into host DNA
AAV29_RS11075	COG0739	heme binding
AAV29_RS11075	COG0741	lytic transglycosylase activity
AAV29_RS11075	COG1196	nuclear chromosome segregation
AAV29_RS11085	COG2433	Pfam Transposase IS66
AAV29_RS11100	COG5434	Belongs to the glycosyl hydrolase 28 family
AAV29_RS11130	COG0457	Tetratricopeptide repeat
AAV29_RS11135	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AAV29_RS11165	COG5444	nuclease activity
AAV29_RS11175	COG4282	regulation of fungal-type cell wall biogenesis
AAV29_RS11180	COG1525	nuclease
AAV29_RS11190	COG2233	PERMEase
AAV29_RS11200	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
AAV29_RS11205	COG1199	ATP-dependent helicase activity
AAV29_RS11215	COG0116	Belongs to the methyltransferase superfamily
AAV29_RS11230	COG3359	exonuclease
AAV29_RS11235	COG1111	helicase
AAV29_RS11235	COG1205	dead DEAH box helicase
AAV29_RS11240	COG2190	(PTS) system
AAV29_RS11245	COG0071	Belongs to the small heat shock protein (HSP20) family
AAV29_RS11285	COG4499	WXG100 protein secretion system (Wss), protein YukC
AAV29_RS11285	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AAV29_RS11295	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AAV29_RS11300	COG3935	DnaD domain protein
AAV29_RS11310	COG0436	Aminotransferase
AAV29_RS11315	COG5353	protein conserved in bacteria
AAV29_RS11320	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AAV29_RS11320	COG1199	ATP-dependent helicase activity
AAV29_RS11350	COG0438	transferase activity, transferring glycosyl groups
AAV29_RS11355	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AAV29_RS11370	COG1694	Mazg nucleotide pyrophosphohydrolase
AAV29_RS11375	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AAV29_RS11380	COG2140	Oxalate decarboxylase
AAV29_RS11390	COG4347	Protein of unknown function (DUF1405)
AAV29_RS11395	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AAV29_RS11395	COG2010	Cytochrome c
AAV29_RS11400	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AAV29_RS11405	COG0723	plastoquinol--plastocyanin reductase activity
AAV29_RS11420	COG0457	Tetratricopeptide repeat
AAV29_RS11430	COG0287	Prephenate dehydrogenase
AAV29_RS11465	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AAV29_RS11470	COG4401	Chorismate mutase type I
AAV29_RS11485	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AAV29_RS11490	COG0105	UTP biosynthetic process
AAV29_RS11495	COG0142	geranyltranstransferase activity
AAV29_RS11505	COG0142	geranyltranstransferase activity
AAV29_RS11520	COG0776	regulation of translation
AAV29_RS11525	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
AAV29_RS11560	COG0539	negative regulation of cytoplasmic translation
AAV29_RS11570	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
AAV29_RS11575	COG2959	enzyme of heme biosynthesis
AAV29_RS11580	COG3409	Peptidoglycan-binding domain 1 protein
AAV29_RS11580	COG3773	Cell wall hydrolase
AAV29_RS11585	COG2339	peptidase activity
AAV29_RS11590	COG0492	ferredoxin-NADP+ reductase activity
AAV29_RS11595	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AAV29_RS11600	COG4862	establishment of competence for transformation
AAV29_RS11605	COG1408	metallophosphoesterase
AAV29_RS11615	COG1388	LysM domain
AAV29_RS11620	COG1266	CAAX protease self-immunity
AAV29_RS11625	COG0514	ATP-dependent DNA helicase (RecQ)
AAV29_RS11630	COG4955	Helix-turn-helix domain
AAV29_RS11635	COG1141	Ferredoxin
AAV29_RS11640	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
AAV29_RS11645	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AAV29_RS11655	COG1595	DNA-templated transcription, initiation
AAV29_RS11660	COG5002	protein histidine kinase activity
AAV29_RS11665	COG0745	RESPONSE REGULATOR receiver
AAV29_RS11670	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AAV29_RS11675	COG1333	cytochrome c biogenesis protein
AAV29_RS11680	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AAV29_RS11685	COG1187	pseudouridine synthase activity
AAV29_RS11690	COG0700	Nucleoside recognition
AAV29_RS11695	COG2715	membrane protein required for spore maturation
AAV29_RS11700	COG1686	Belongs to the peptidase S11 family
AAV29_RS11720	COG1547	Domain of unknown function (DUF309)
AAV29_RS11725	COG0456	acetyltransferase
AAV29_RS11740	COG0307	riboflavin synthase, alpha
AAV29_RS11745	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AAV29_RS11745	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AAV29_RS11755	COG0681	Belongs to the peptidase S26 family
AAV29_RS11765	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AAV29_RS11770	COG4086	secreted protein
AAV29_RS11775	COG0019	diaminopimelate decarboxylase activity
AAV29_RS11780	COG0697	spore germination
AAV29_RS11795	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AAV29_RS11815	COG1191	sigma factor activity
AAV29_RS11825	COG1366	Belongs to the anti-sigma-factor antagonist family
AAV29_RS11830	COG1686	Belongs to the peptidase S11 family
AAV29_RS11835	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
AAV29_RS11840	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AAV29_RS11845	COG4974	Belongs to the 'phage' integrase family
AAV29_RS11855	COG0735	belongs to the Fur family
AAV29_RS11860	COG1300	Membrane
AAV29_RS11875	COG0281	malic enzyme
AAV29_RS11880	COG1757	Na H antiporter
AAV29_RS11885	COG1027	Aspartate ammonia-lyase
AAV29_RS11890	COG0252	asparaginase activity
AAV29_RS11895	COG1396	sequence-specific DNA binding
AAV29_RS11900	COG1379	DNA repair
AAV29_RS11905	COG0494	nUDIX hydrolase
AAV29_RS11915	COG0667	Aldo Keto reductase
AAV29_RS11925	COG1073	alpha beta
AAV29_RS11935	COG4918	Iron-sulphur cluster biosynthesis
AAV29_RS11940	COG0456	acetyltransferase
AAV29_RS11940	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AAV29_RS11945	COG2329	Antibiotic biosynthesis monooxygenase
AAV29_RS11950	COG0456	acetyltransferase
AAV29_RS11955	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AAV29_RS11970	COG0628	permease
AAV29_RS11975	COG0346	lactoylglutathione lyase activity
AAV29_RS11985	COG3048	D-serine ammonia-lyase activity
AAV29_RS11990	COG0300	oxidoreductase activity
AAV29_RS11995	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AAV29_RS12000	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AAV29_RS12005	COG1024	Enoyl-CoA hydratase
AAV29_RS12010	COG3425	synthase
AAV29_RS12015	COG2124	cytochrome p450
AAV29_RS12020	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS12020	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AAV29_RS12020	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS12020	COG3321	synthase
AAV29_RS12020	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AAV29_RS12025	COG3321	synthase
AAV29_RS12025	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS12025	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS12025	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AAV29_RS12025	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AAV29_RS12030	COG0300	oxidoreductase activity
AAV29_RS12030	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS12030	COG3321	synthase
AAV29_RS12030	COG0318	PFAM AMP-dependent synthetase and ligase
AAV29_RS12030	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS12035	COG0318	PFAM AMP-dependent synthetase and ligase
AAV29_RS12035	COG3321	synthase
AAV29_RS12035	COG0300	oxidoreductase activity
AAV29_RS12035	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS12035	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS12040	COG3321	synthase
AAV29_RS12040	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS12040	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS12040	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AAV29_RS12040	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AAV29_RS12045	COG0318	PFAM AMP-dependent synthetase and ligase
AAV29_RS12045	COG3321	synthase
AAV29_RS12045	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS12045	COG0300	oxidoreductase activity
AAV29_RS12045	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS12050	COG3321	synthase
AAV29_RS12050	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AAV29_RS12050	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AAV29_RS12050	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS12050	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS12055	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS12060	COG0318	PFAM AMP-dependent synthetase and ligase
AAV29_RS12075	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AAV29_RS12075	COG2070	2-Nitropropane dioxygenase
AAV29_RS12080	COG0250	Participates in transcription elongation, termination and antitermination
AAV29_RS12100	COG0596	Alpha beta hydrolase
AAV29_RS12115	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AAV29_RS12120	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AAV29_RS12135	COG0706	membrane insertase activity
AAV29_RS12140	COG2195	Cleaves the N-terminal amino acid of tripeptides
AAV29_RS12145	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AAV29_RS12150	COG0346	lactoylglutathione lyase activity
AAV29_RS12155	COG1376	ErfK ybiS ycfS ynhG family protein
AAV29_RS12160	COG4129	membrane
AAV29_RS12165	COG1126	abc transporter atp-binding protein
AAV29_RS12170	COG0765	amino acid transport
AAV29_RS12175	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AAV29_RS12185	COG1597	lipid kinase activity
AAV29_RS12190	COG0508	dehydrogenase complex catalyzes the overall conversion of
AAV29_RS12195	COG0022	dehydrogenase e1 component
AAV29_RS12200	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AAV29_RS12205	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AAV29_RS12210	COG3426	butyrate kinase activity
AAV29_RS12215	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AAV29_RS12220	COG0280	phosphate acetyltransferase
AAV29_RS12225	COG3290	protein histidine kinase activity
AAV29_RS12225	COG3829	transcription factor binding
AAV29_RS12235	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
AAV29_RS12240	COG2079	MmgE PrpD family protein
AAV29_RS12245	COG0372	Belongs to the citrate synthase family
AAV29_RS12250	COG1960	acyl-CoA dehydrogenase activity
AAV29_RS12255	COG1250	3-hydroxyacyl-CoA dehydrogenase
AAV29_RS12260	COG0183	Belongs to the thiolase family
AAV29_RS12265	COG0584	glycerophosphoryl diester phosphodiesterase
AAV29_RS12270	COG0860	N-Acetylmuramoyl-L-alanine amidase
AAV29_RS12295	COG1902	pentaerythritol trinitrate reductase activity
AAV29_RS12310	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AAV29_RS12315	COG0745	RESPONSE REGULATOR receiver
AAV29_RS12320	COG0750	zinc metalloprotease
AAV29_RS12325	COG0497	DNA recombination
AAV29_RS12335	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
AAV29_RS12345	COG0142	geranyltranstransferase activity
AAV29_RS12355	COG1570	exodeoxyribonuclease VII activity
AAV29_RS12370	COG1302	Protein conserved in bacteria
AAV29_RS12375	COG0439	Biotin carboxylase
AAV29_RS12380	COG0511	ligase activity, forming carbon-carbon bonds
AAV29_RS12420	COG3854	ATPases associated with a variety of cellular activities
AAV29_RS12435	COG0006	proline dipeptidase activity
AAV29_RS12445	COG3872	metal-dependent enzyme
AAV29_RS12455	COG1752	Esterase of the alpha-beta hydrolase superfamily
AAV29_RS12470	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AAV29_RS12490	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AAV29_RS12505	COG1396	sequence-specific DNA binding
AAV29_RS12515	COG0681	Belongs to the peptidase S26 family
AAV29_RS12540	COG4940	Competence protein ComGF
AAV29_RS12550	COG4970	Tfp pilus assembly protein FimT
AAV29_RS12555	COG4537	Required for transformation and DNA binding
AAV29_RS12560	COG1459	type II secretion system
AAV29_RS12565	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AAV29_RS12570	COG0598	Magnesium transport protein CorA
AAV29_RS12575	COG1253	flavin adenine dinucleotide binding
AAV29_RS12580	COG1366	Belongs to the anti-sigma-factor antagonist family
AAV29_RS12590	COG1393	Belongs to the ArsC family
AAV29_RS12600	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AAV29_RS12610	COG0011	TIGRFAM Protein of
AAV29_RS12620	COG2866	Carboxypeptidase
AAV29_RS12625	COG1940	carbohydrate kinase activity
AAV29_RS12630	COG4483	Protein conserved in bacteria
AAV29_RS12635	COG1757	Na H antiporter
AAV29_RS12640	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AAV29_RS12650	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AAV29_RS12655	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AAV29_RS12660	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AAV29_RS12665	COG0581	inorganic phosphate transmembrane transporter activity
AAV29_RS12670	COG0573	inorganic phosphate transmembrane transporter activity
AAV29_RS12675	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AAV29_RS12680	COG0768	penicillin binding
AAV29_RS12685	COG0477	Major facilitator Superfamily
AAV29_RS12690	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AAV29_RS12695	COG2839	Protein conserved in bacteria
AAV29_RS12700	COG5521	maltodextrose utilization protein MalA
AAV29_RS12705	COG1388	LysM domain
AAV29_RS12715	COG4709	membrane
AAV29_RS12720	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
AAV29_RS12725	COG0735	belongs to the Fur family
AAV29_RS12730	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AAV29_RS12745	COG0513	Belongs to the DEAD box helicase family
AAV29_RS12760	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AAV29_RS12765	COG2384	SAM-dependent methyltransferase
AAV29_RS12770	COG2010	Cytochrome c
AAV29_RS12775	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AAV29_RS12780	COG0358	DNA primase activity
AAV29_RS12795	COG0517	IMP dehydrogenase activity
AAV29_RS12800	COG0751	glycine-tRNA ligase activity
AAV29_RS12815	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AAV29_RS12820	COG0295	cytidine deaminase activity
AAV29_RS12825	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AAV29_RS12835	COG1480	7TM receptor with intracellular HD hydrolase
AAV29_RS12840	COG1702	phosphate starvation-inducible protein PhoH
AAV29_RS12845	COG0561	phosphatase activity
AAV29_RS12860	COG4864	UPF0365 protein
AAV29_RS12865	COG1030	water channel activity
AAV29_RS12870	COG1610	YqeY-like protein
AAV29_RS12880	COG1283	sodium-dependent phosphate transmembrane transporter activity
AAV29_RS12885	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AAV29_RS12890	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AAV29_RS12920	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AAV29_RS12935	COG0860	N-Acetylmuramoyl-L-alanine amidase
AAV29_RS12950	COG1466	dna polymerase III delta subunit
AAV29_RS12960	COG0658	competence protein
AAV29_RS12960	COG2333	competence protein COMEC
AAV29_RS12965	COG2131	deaminase
AAV29_RS12970	COG1555	photosystem II stabilization
AAV29_RS12970	COG1596	polysaccharide export
AAV29_RS12975	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AAV29_RS12980	COG2226	methyltransferase
AAV29_RS12985	COG0799	negative regulation of ribosome biogenesis
AAV29_RS12990	COG1713	HD superfamily hydrolase involved in NAD metabolism
AAV29_RS13000	COG1534	Rna-binding protein
AAV29_RS13005	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AAV29_RS13010	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AAV29_RS13015	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
AAV29_RS13025	COG2755	lipolytic protein G-D-S-L family
AAV29_RS13035	COG0398	Pfam SNARE associated Golgi protein
AAV29_RS13060	COG2207	Transcriptional regulator
AAV29_RS13060	COG3708	Transcriptional regulator
AAV29_RS13065	COG0563	adenylate kinase activity
AAV29_RS13075	COG2814	Major facilitator Superfamily
AAV29_RS13090	COG5444	nuclease activity
AAV29_RS13135	COG0456	acetyltransferase
AAV29_RS13140	COG2318	DinB family
AAV29_RS13150	COG0561	phosphatase activity
AAV29_RS13165	COG1482	cell wall glycoprotein biosynthetic process
AAV29_RS13170	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AAV29_RS13170	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AAV29_RS13170	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AAV29_RS13175	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AAV29_RS13175	COG3711	transcriptional antiterminator
AAV29_RS13185	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AAV29_RS13190	COG0583	DNA-binding transcription factor activity
AAV29_RS13195	COG2814	Major facilitator Superfamily
AAV29_RS13200	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AAV29_RS13200	COG2124	cytochrome p450
AAV29_RS13205	COG1309	transcriptional regulator
AAV29_RS13210	COG2226	methyltransferase
AAV29_RS13220	COG2116	formate transmembrane transporter activity
AAV29_RS13225	COG5609	conserved protein (DUF2294)
AAV29_RS13230	COG3383	formate dehydrogenase (NAD+) activity
AAV29_RS13235	COG2427	Protein of unknown function (DUF1641)
AAV29_RS13245	COG0626	cystathionine gamma-synthase activity
AAV29_RS13250	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AAV29_RS13275	COG0768	penicillin binding
AAV29_RS13290	COG0826	peptidase U32
AAV29_RS13295	COG0826	peptidase U32
AAV29_RS13300	COG4122	O-methyltransferase activity
AAV29_RS13305	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AAV29_RS13320	COG4472	Bacterial protein of unknown function (DUF965)
AAV29_RS13330	COG0628	permease
AAV29_RS13335	COG1126	abc transporter atp-binding protein
AAV29_RS13340	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AAV29_RS13345	COG0765	amino acid transport
AAV29_RS13350	COG0765	amino acid transport
AAV29_RS13360	COG3881	PFAM PRC-barrel domain
AAV29_RS13365	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AAV29_RS13370	COG0457	Tetratricopeptide repeat
AAV29_RS13380	COG1104	cysteine desulfurase activity
AAV29_RS13385	COG1959	2 iron, 2 sulfur cluster binding
AAV29_RS13390	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AAV29_RS13395	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AAV29_RS13410	COG0860	N-Acetylmuramoyl-L-alanine amidase
AAV29_RS13410	COG3103	Sh3 type 3 domain protein
AAV29_RS13410	COG4991	sh3 domain protein
AAV29_RS13420	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AAV29_RS13430	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AAV29_RS13430	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
AAV29_RS13435	COG5416	Lipopolysaccharide assembly protein A domain
AAV29_RS13440	COG0490	domain, Protein
AAV29_RS13445	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AAV29_RS13445	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AAV29_RS13455	COG2244	polysaccharide biosynthetic process
AAV29_RS13460	COG2323	membrane
AAV29_RS13470	COG1862	Preprotein translocase
AAV29_RS13515	COG1388	LysM domain
AAV29_RS13525	COG0157	Belongs to the NadC ModD family
AAV29_RS13530	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AAV29_RS13535	COG1104	cysteine desulfurase activity
AAV29_RS13540	COG1827	regulation of RNA biosynthetic process
AAV29_RS13545	COG0077	Prephenate dehydratase
AAV29_RS13560	COG3290	protein histidine kinase activity
AAV29_RS13565	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AAV29_RS13570	COG2868	ribosomal protein
AAV29_RS13580	COG1994	Peptidase M50
AAV29_RS13585	COG0739	heme binding
AAV29_RS13590	COG2894	cell division
AAV29_RS13600	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AAV29_RS13610	COG1077	Cell shape determining protein MreB Mrl
AAV29_RS13620	COG0457	Tetratricopeptide repeat
AAV29_RS13625	COG5444	nuclease activity
AAV29_RS13640	COG5632	N-Acetylmuramoyl-L-alanine amidase
AAV29_RS13640	COG1388	LysM domain
AAV29_RS13640	COG3409	Peptidoglycan-binding domain 1 protein
AAV29_RS13670	COG5434	Belongs to the glycosyl hydrolase 28 family
AAV29_RS13675	COG1705	Flagellar rod assembly protein muramidase FlgJ
AAV29_RS13685	COG3953	SLT domain
AAV29_RS13685	COG5280	Phage tail tape measure protein TP901
AAV29_RS13850	COG1396	sequence-specific DNA binding
AAV29_RS13880	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
AAV29_RS13885	COG0285	dihydrofolate synthase activity
AAV29_RS13890	COG0525	valine-tRNA ligase activity
AAV29_RS13900	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AAV29_RS13905	COG1388	LysM domain
AAV29_RS13915	COG0113	porphobilinogen synthase activity
AAV29_RS13920	COG1587	Uroporphyrinogen-III synthase
AAV29_RS13930	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AAV29_RS13950	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AAV29_RS13955	COG1067	ATP-dependent peptidase activity
AAV29_RS13955	COG0470	DNA polymerase III
AAV29_RS13970	COG1477	protein flavinylation
AAV29_RS13970	COG0457	Tetratricopeptide repeat
AAV29_RS13985	COG0473	3-isopropylmalate dehydrogenase activity
AAV29_RS14000	COG0440	acetolactate synthase activity
AAV29_RS14005	COG0028	Belongs to the TPP enzyme family
AAV29_RS14035	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
AAV29_RS14055	COG0622	Phosphoesterase
AAV29_RS14060	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AAV29_RS14070	COG5401	PFAM Sporulation and spore germination
AAV29_RS14080	COG1846	Transcriptional regulator
AAV29_RS14085	COG2197	response regulator
AAV29_RS14090	COG0824	Thioesterase
AAV29_RS14095	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AAV29_RS14100	COG1053	succinate dehydrogenase
AAV29_RS14105	COG2009	succinate dehydrogenase
AAV29_RS14110	COG1719	4-vinyl reductase, 4VR
AAV29_RS14115	COG0527	aspartate kinase activity
AAV29_RS14125	COG3118	belongs to the thioredoxin family
AAV29_RS14130	COG3534	alpha-L-arabinofuranosidase
AAV29_RS14135	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
AAV29_RS14140	COG2086	electron transfer activity
AAV29_RS14145	COG1024	Enoyl-CoA hydratase
AAV29_RS14150	COG1309	transcriptional regulator
AAV29_RS14155	COG0318	PFAM AMP-dependent synthetase and ligase
AAV29_RS14165	COG3766	membrane
AAV29_RS14175	COG1796	DNA polymerase
AAV29_RS14175	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AAV29_RS14180	COG1286	toxin biosynthetic process
AAV29_RS14195	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AAV29_RS14195	COG0072	phenylalanine-tRNA ligase activity
AAV29_RS14200	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AAV29_RS14205	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AAV29_RS14215	COG3835	regulator
AAV29_RS14220	COG0277	FAD linked oxidase domain protein
AAV29_RS14225	COG0247	lactate metabolic process
AAV29_RS14230	COG1966	Carbon starvation protein
AAV29_RS14235	COG3534	alpha-L-arabinofuranosidase
AAV29_RS14240	COG0395	ABC-type sugar transport system, permease component
AAV29_RS14245	COG1175	transmembrane transport
AAV29_RS14250	COG1653	transport
AAV29_RS14260	COG0647	UMP catabolic process
AAV29_RS14265	COG0235	Class ii aldolase
AAV29_RS14270	COG1069	ribulokinase activity
AAV29_RS14275	COG2160	L-arabinose isomerase activity
AAV29_RS14280	COG3507	Belongs to the glycosyl hydrolase 43 family
AAV29_RS14285	COG1363	Peptidase, m42
AAV29_RS14295	COG3326	Membrane
AAV29_RS14300	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AAV29_RS14310	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AAV29_RS14315	COG1346	cytolysis
AAV29_RS14320	COG1380	Effector of murein hydrolase LrgA
AAV29_RS14325	COG3279	Response regulator of the LytR AlgR family
AAV29_RS14330	COG3275	phosphorelay sensor kinase activity
AAV29_RS14335	COG1011	Hydrolase
AAV29_RS14350	COG0398	Pfam SNARE associated Golgi protein
AAV29_RS14355	COG1484	DNA-dependent DNA replication
AAV29_RS14360	COG3611	Membrane attachment protein
AAV29_RS14375	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AAV29_RS14380	COG1733	regulation of RNA biosynthetic process
AAV29_RS14385	COG2814	Major facilitator Superfamily
AAV29_RS14390	COG0656	L-ascorbic acid biosynthetic process
AAV29_RS14395	COG0237	dephospho-CoA kinase activity
AAV29_RS14400	COG1971	Probably functions as a manganese efflux pump
AAV29_RS14405	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AAV29_RS14410	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AAV29_RS14410	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AAV29_RS14415	COG5002	protein histidine kinase activity
AAV29_RS14420	COG0745	RESPONSE REGULATOR receiver
AAV29_RS14430	COG0538	isocitrate dehydrogenase activity
AAV29_RS14435	COG0372	Belongs to the citrate synthase family
AAV29_RS14450	COG0628	permease
AAV29_RS14455	COG3030	protein affecting phage T7 exclusion by the F plasmid
AAV29_RS14460	COG0469	pyruvate kinase activity
AAV29_RS14485	COG0281	malic enzyme
AAV29_RS14490	COG0587	DNA-directed DNA polymerase activity
AAV29_RS14510	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
AAV29_RS14520	COG4109	DRTGG domain
AAV29_RS14530	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS14545	COG0521	Mo-molybdopterin cofactor biosynthetic process
AAV29_RS14555	COG0827	DNA restriction-modification system
AAV29_RS14560	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AAV29_RS14565	COG3874	Sporulation protein YtfJ
AAV29_RS14575	COG1714	RDD family
AAV29_RS14580	COG0616	signal peptide processing
AAV29_RS14585	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AAV29_RS14590	COG1574	metal-dependent hydrolase with the TIM-barrel fold
AAV29_RS14595	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AAV29_RS14610	COG1104	cysteine desulfurase activity
AAV29_RS14615	COG1114	Component of the transport system for branched-chain amino acids
AAV29_RS14625	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AAV29_RS14630	COG1309	transcriptional regulator
AAV29_RS14635	COG1956	GAF domain-containing protein
AAV29_RS14640	COG2203	Gaf domain
AAV29_RS14640	COG2199	diguanylate cyclase activity
AAV29_RS14650	COG1012	belongs to the aldehyde dehydrogenase family
AAV29_RS14655	COG4282	regulation of fungal-type cell wall biogenesis
AAV29_RS14660	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AAV29_RS14660	COG1017	nitric oxide dioxygenase activity
AAV29_RS14670	COG0693	protein deglycase activity
AAV29_RS14685	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AAV29_RS14690	COG1378	Sugar-specific transcriptional regulator TrmB
AAV29_RS14710	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AAV29_RS14715	COG0454	-acetyltransferase
AAV29_RS14720	COG0517	IMP dehydrogenase activity
AAV29_RS14725	COG0123	including yeast histone deacetylase and acetoin utilization protein
AAV29_RS14730	COG1360	Flagellar Motor Protein
AAV29_RS14735	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AAV29_RS14740	COG1609	Transcriptional regulator
AAV29_RS14745	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
AAV29_RS14745	COG1605	Chorismate mutase
AAV29_RS14750	COG3118	belongs to the thioredoxin family
AAV29_RS14755	COG4980	gas vesicle protein
AAV29_RS14760	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
AAV29_RS14770	COG1674	ftsk spoiiie
AAV29_RS14775	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AAV29_RS14785	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AAV29_RS14795	COG1363	Peptidase, m42
AAV29_RS14800	COG5584	Small secreted protein
AAV29_RS14805	COG0281	malic enzyme
AAV29_RS14810	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AAV29_RS14825	COG0510	thiamine kinase activity
AAV29_RS14830	COG1597	lipid kinase activity
AAV29_RS14840	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AAV29_RS14845	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AAV29_RS14850	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AAV29_RS14855	COG2252	PERMEase
AAV29_RS14860	COG4473	ABC transporter
AAV29_RS14865	COG1131	(ABC) transporter
AAV29_RS14870	COG1349	DNA-binding transcription factor activity
AAV29_RS14875	COG1187	pseudouridine synthase activity
AAV29_RS14880	COG2244	polysaccharide biosynthetic process
AAV29_RS14885	COG2081	HI0933 family
AAV29_RS14890	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AAV29_RS14900	COG1609	Transcriptional regulator
AAV29_RS14905	COG1653	transport
AAV29_RS14910	COG1175	transmembrane transport
AAV29_RS14915	COG0395	ABC-type sugar transport system, permease component
AAV29_RS14920	COG1486	melibiose metabolic process
AAV29_RS14930	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AAV29_RS14945	COG1366	Belongs to the anti-sigma-factor antagonist family
AAV29_RS14945	COG2202	Pas domain
AAV29_RS14950	COG2814	Major facilitator Superfamily
AAV29_RS14955	COG5522	Integral membrane protein (intg_mem_TP0381)
AAV29_RS14960	COG0577	efflux transmembrane transporter activity
AAV29_RS14965	COG1136	(ABC) transporter
AAV29_RS14970	COG2205	protein histidine kinase activity
AAV29_RS14975	COG0745	RESPONSE REGULATOR receiver
AAV29_RS14980	COG0577	efflux transmembrane transporter activity
AAV29_RS14985	COG1136	(ABC) transporter
AAV29_RS15005	COG1131	(ABC) transporter
AAV29_RS15010	COG1725	Transcriptional regulator
AAV29_RS15020	COG1242	4 iron, 4 sulfur cluster binding
AAV29_RS15025	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
AAV29_RS15035	COG0584	glycerophosphoryl diester phosphodiesterase
AAV29_RS15045	COG2267	carboxylic ester hydrolase activity
AAV29_RS15050	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AAV29_RS15055	COG1113	amino acid transport
AAV29_RS15060	COG0367	asparagine synthase
AAV29_RS15080	COG1506	peptidase
AAV29_RS15085	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AAV29_RS15090	COG1116	anion transmembrane transporter activity
AAV29_RS15095	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AAV29_RS15100	COG0494	nUDIX hydrolase
AAV29_RS15105	COG4824	toxin secretion phage lysis holin
AAV29_RS15110	COG0783	Belongs to the Dps family
AAV29_RS15135	COG0288	reversible hydration of carbon dioxide
AAV29_RS15145	COG1271	oxidase subunit
AAV29_RS15150	COG1294	oxidase, subunit
AAV29_RS15155	COG4948	Mandelate Racemase Muconate Lactonizing
AAV29_RS15165	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
AAV29_RS15170	COG0596	Alpha beta hydrolase
AAV29_RS15180	COG1169	isochorismate synthase
AAV29_RS15185	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AAV29_RS15190	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
AAV29_RS15315	COG3859	Proton-coupled thiamine transporter YuaJ
AAV29_RS15320	COG2268	Band 7 protein
AAV29_RS15325	COG1585	Membrane protein implicated in regulation of membrane protease activity
AAV29_RS15330	COG2318	DinB family
AAV29_RS15340	COG1454	alcohol dehydrogenase
AAV29_RS15345	COG1012	belongs to the aldehyde dehydrogenase family
AAV29_RS15350	COG1510	regulation of RNA biosynthetic process
AAV29_RS15360	COG0569	domain protein
AAV29_RS15365	COG1705	Flagellar rod assembly protein muramidase FlgJ
AAV29_RS15370	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AAV29_RS15370	COG1017	nitric oxide dioxygenase activity
AAV29_RS15415	COG0628	permease
AAV29_RS15420	COG0673	inositol 2-dehydrogenase activity
AAV29_RS15425	COG0693	protein deglycase activity
AAV29_RS15430	COG0840	transmembrane signaling receptor activity
AAV29_RS15435	COG0840	transmembrane signaling receptor activity
AAV29_RS15440	COG0840	transmembrane signaling receptor activity
AAV29_RS15445	COG0840	transmembrane signaling receptor activity
AAV29_RS15460	COG2070	2-Nitropropane dioxygenase
AAV29_RS15465	COG0432	Pfam Uncharacterised protein family UPF0047
AAV29_RS15470	COG0366	Alpha amylase catalytic
AAV29_RS15475	COG1253	flavin adenine dinucleotide binding
AAV29_RS15480	COG2738	Putative neutral zinc metallopeptidase
AAV29_RS15495	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AAV29_RS15520	COG1335	isochorismatase
AAV29_RS15525	COG1979	alcohol dehydrogenase
AAV29_RS15530	COG1979	alcohol dehydrogenase
AAV29_RS15535	COG2155	Conserved Protein
AAV29_RS15540	COG1098	S1 RNA binding domain
AAV29_RS15545	COG0436	Aminotransferase
AAV29_RS15550	COG1522	sequence-specific DNA binding
AAV29_RS15555	COG2267	carboxylic ester hydrolase activity
AAV29_RS15565	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AAV29_RS15570	COG2205	protein histidine kinase activity
AAV29_RS15580	COG5018	Exonuclease
AAV29_RS15585	COG2814	Major facilitator Superfamily
AAV29_RS15590	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AAV29_RS15595	COG3011	Protein conserved in bacteria
AAV29_RS15605	COG3290	protein histidine kinase activity
AAV29_RS15610	COG4565	transcriptional regulatory protein
AAV29_RS15615	COG1744	ABC transporter substrate-binding protein PnrA-like
AAV29_RS15620	COG3845	ABC transporter
AAV29_RS15625	COG4603	Belongs to the binding-protein-dependent transport system permease family
AAV29_RS15630	COG1079	Belongs to the binding-protein-dependent transport system permease family
AAV29_RS15640	COG2111	Na H antiporter
AAV29_RS15640	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AAV29_RS15645	COG2111	Na H antiporter
AAV29_RS15650	COG1006	Multisubunit Na H antiporter MnhC subunit
AAV29_RS15655	COG0651	ATP synthesis coupled electron transport
AAV29_RS15660	COG1863	multisubunit Na H antiporter MnhE subunit
AAV29_RS15665	COG2212	antiporter activity
AAV29_RS15670	COG1320	monovalent cation:proton antiporter activity
AAV29_RS15675	COG2050	protein possibly involved in aromatic compounds catabolism
AAV29_RS15680	COG2197	response regulator
AAV29_RS15685	COG4585	Histidine kinase
AAV29_RS15695	COG0142	geranyltranstransferase activity
AAV29_RS15715	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
AAV29_RS15720	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AAV29_RS15725	COG1335	isochorismatase
AAV29_RS15730	COG5506	Protein of unknown function (DUF1694)
AAV29_RS15745	COG0628	permease
AAV29_RS15755	COG1418	mRNA catabolic process
AAV29_RS15760	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS15770	COG1511	domain protein
AAV29_RS15775	COG0433	COG0433 Predicted ATPase
AAV29_RS15775	COG1674	ftsk spoiiie
AAV29_RS15780	COG4499	WXG100 protein secretion system (Wss), protein YukC
AAV29_RS15785	COG5417	Belongs to the EsaB family
AAV29_RS15790	COG4842	Belongs to the WXG100 family
AAV29_RS15795	COG2508	Transcriptional regulator
AAV29_RS15795	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
AAV29_RS15800	COG0686	Belongs to the AlaDH PNT family
AAV29_RS15805	COG5634	Uncharacterized conserved protein (DUF2278)
AAV29_RS15810	COG3251	PFAM MbtH domain protein
AAV29_RS15815	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AAV29_RS15820	COG3433	isochorismatase activity
AAV29_RS15820	COG1535	isochorismatase
AAV29_RS15825	COG1021	2,3-dihydroxybenzoate-AMP ligase
AAV29_RS15830	COG1169	isochorismate synthase
AAV29_RS15835	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS15840	COG2819	hydrolase of the alpha beta superfamily
AAV29_RS15845	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AAV29_RS15850	COG1268	BioY protein
AAV29_RS15855	COG2056	Na+-H+ antiporter family
AAV29_RS15865	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
AAV29_RS15870	COG3584	3D domain protein
AAV29_RS15880	COG1252	NADH dehydrogenase
AAV29_RS15905	COG1131	(ABC) transporter
AAV29_RS15930	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
AAV29_RS15935	COG0316	Belongs to the HesB IscA family
AAV29_RS15945	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AAV29_RS15955	COG1252	NADH dehydrogenase
AAV29_RS15960	COG4837	Protein of unknown function (DUF1462)
AAV29_RS15965	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
AAV29_RS15970	COG4946	Tricorn protease homolog
AAV29_RS15970	COG1506	peptidase
AAV29_RS15970	COG0823	Involved in the tonB-independent uptake of proteins
AAV29_RS15980	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AAV29_RS15985	COG0460	homoserine dehydrogenase
AAV29_RS15990	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AAV29_RS15995	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AAV29_RS16000	COG0647	UMP catabolic process
AAV29_RS16005	COG2445	Protein of unknown function DUF86
AAV29_RS16010	COG4470	Protein conserved in bacteria
AAV29_RS16020	COG0739	heme binding
AAV29_RS16030	COG0737	Belongs to the 5'-nucleotidase family
AAV29_RS16035	COG0730	response to heat
AAV29_RS16040	COG1801	Protein of unknown function DUF72
AAV29_RS16055	COG2508	Transcriptional regulator
AAV29_RS16060	COG0338	D12 class N6 adenine-specific DNA methyltransferase
AAV29_RS16080	COG2814	Major facilitator Superfamily
AAV29_RS16085	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AAV29_RS16090	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AAV29_RS16095	COG2356	endonuclease I
AAV29_RS16100	COG3842	ATPase activity
AAV29_RS16105	COG2188	Transcriptional regulator
AAV29_RS16110	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AAV29_RS16115	COG0395	ABC-type sugar transport system, permease component
AAV29_RS16120	COG1175	transmembrane transport
AAV29_RS16125	COG1653	transport
AAV29_RS16130	COG2222	sugar isomerase
AAV29_RS16135	COG0789	Transcriptional regulator
AAV29_RS16145	COG0322	excinuclease ABC activity
AAV29_RS16150	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AAV29_RS16155	COG2226	methyltransferase
AAV29_RS16170	COG3409	Peptidoglycan-binding domain 1 protein
AAV29_RS16175	COG0719	Fe-S assembly protein
AAV29_RS16180	COG0822	iron-sulfur transferase activity
AAV29_RS16185	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AAV29_RS16190	COG0719	Fe-S assembly protein
AAV29_RS16195	COG0396	ATPase activity
AAV29_RS16200	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AAV29_RS16205	COG1464	Belongs to the NlpA lipoprotein family
AAV29_RS16210	COG2011	ABC-type metal ion transport system permease component
AAV29_RS16215	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AAV29_RS16225	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AAV29_RS16230	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AAV29_RS16245	COG1393	Belongs to the ArsC family
AAV29_RS16250	COG1960	acyl-CoA dehydrogenase activity
AAV29_RS16255	COG0183	Belongs to the thiolase family
AAV29_RS16260	COG1024	Enoyl-CoA hydratase
AAV29_RS16260	COG1250	3-hydroxyacyl-CoA dehydrogenase
AAV29_RS16280	COG5577	PFAM Coat F domain
AAV29_RS16285	COG1846	Transcriptional regulator
AAV29_RS16290	COG0477	Major facilitator Superfamily
AAV29_RS16295	COG0583	DNA-binding transcription factor activity
AAV29_RS16315	COG1120	ATPase activity
AAV29_RS16330	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS16335	COG0783	Belongs to the Dps family
AAV29_RS16340	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AAV29_RS16345	COG0745	RESPONSE REGULATOR receiver
AAV29_RS16350	COG2770	Histidine kinase
AAV29_RS16350	COG2205	protein histidine kinase activity
AAV29_RS16355	COG1309	transcriptional regulator
AAV29_RS16360	COG0114	fumarate hydratase activity
AAV29_RS16370	COG0697	spore germination
AAV29_RS16375	COG0814	amino acid
AAV29_RS16385	COG2197	response regulator
AAV29_RS16390	COG4585	Histidine kinase
AAV29_RS16395	COG4758	membrane
AAV29_RS16400	COG3595	metallopeptidase activity
AAV29_RS16405	COG1842	Phage shock protein A
AAV29_RS16410	COG4758	membrane
AAV29_RS16415	COG2814	Major facilitator Superfamily
AAV29_RS16420	COG2096	Adenosyltransferase
AAV29_RS16425	COG1120	ATPase activity
AAV29_RS16430	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AAV29_RS16435	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AAV29_RS16440	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS16445	COG3386	PFAM SMP-30 Gluconolaconase
AAV29_RS16450	COG2205	protein histidine kinase activity
AAV29_RS16455	COG0745	RESPONSE REGULATOR receiver
AAV29_RS16465	COG1191	sigma factor activity
AAV29_RS16470	COG2140	Oxalate decarboxylase
AAV29_RS16480	COG1120	ATPase activity
AAV29_RS16485	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AAV29_RS16490	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AAV29_RS16495	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AAV29_RS16500	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
AAV29_RS16505	COG0531	amino acid
AAV29_RS16515	COG1988	membrane-bound metal-dependent
AAV29_RS16520	COG1368	sulfuric ester hydrolase activity
AAV29_RS16525	COG1910	domain protein
AAV29_RS16530	COG0725	ABC transporter, periplasmic molybdate-binding protein
AAV29_RS16535	COG4149	molybdate abc transporter
AAV29_RS16540	COG2197	response regulator
AAV29_RS16545	COG3850	Histidine kinase
AAV29_RS16550	COG1131	(ABC) transporter
AAV29_RS16560	COG0842	Transport permease protein
AAV29_RS16565	COG0656	L-ascorbic acid biosynthetic process
AAV29_RS16590	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AAV29_RS16595	COG3973	AAA domain
AAV29_RS16600	COG2860	membrane
AAV29_RS16610	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
AAV29_RS16615	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AAV29_RS16620	COG2217	Heavy metal translocating P-type atpase
AAV29_RS16625	COG2217	Heavy metal translocating P-type atpase
AAV29_RS16630	COG2608	mercury ion transmembrane transporter activity
AAV29_RS16635	COG1937	Protein conserved in bacteria
AAV29_RS16640	COG0673	inositol 2-dehydrogenase activity
AAV29_RS16655	COG2814	Major facilitator Superfamily
AAV29_RS16670	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AAV29_RS16675	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AAV29_RS16680	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AAV29_RS16685	COG1126	abc transporter atp-binding protein
AAV29_RS16690	COG0765	amino acid transport
AAV29_RS16695	COG0765	amino acid transport
AAV29_RS16700	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AAV29_RS16705	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AAV29_RS16710	COG0454	-acetyltransferase
AAV29_RS16715	COG0583	DNA-binding transcription factor activity
AAV29_RS16720	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS16725	COG2732	(Barnase) inhibitor
AAV29_RS16735	COG0557	exoribonuclease II activity
AAV29_RS16740	COG1647	Serine aminopeptidase, S33
AAV29_RS16745	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AAV29_RS16750	COG1476	TRANSCRIPTIONal
AAV29_RS16755	COG1396	sequence-specific DNA binding
AAV29_RS16760	COG1396	sequence-specific DNA binding
AAV29_RS16765	COG1733	regulation of RNA biosynthetic process
AAV29_RS16790	COG1131	(ABC) transporter
AAV29_RS16795	COG1174	glycine betaine transport
AAV29_RS16800	COG1732	Glycine betaine
AAV29_RS16805	COG1174	glycine betaine transport
AAV29_RS16810	COG1125	glycine betaine transport
AAV29_RS16810	COG0517	IMP dehydrogenase activity
AAV29_RS16815	COG1510	regulation of RNA biosynthetic process
AAV29_RS16820	COG1174	glycine betaine transport
AAV29_RS16825	COG1732	Glycine betaine
AAV29_RS16830	COG1174	glycine betaine transport
AAV29_RS16835	COG1125	glycine betaine transport
AAV29_RS16835	COG0517	IMP dehydrogenase activity
AAV29_RS16840	COG1510	regulation of RNA biosynthetic process
AAV29_RS16845	COG2095	MarC family integral membrane protein
AAV29_RS16850	COG3064	Membrane
AAV29_RS16855	COG4640	response to antibiotic
AAV29_RS16860	COG0456	acetyltransferase
AAV29_RS16875	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AAV29_RS16890	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AAV29_RS16895	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AAV29_RS16900	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AAV29_RS16910	COG2234	aminopeptidase activity
AAV29_RS16930	COG0126	phosphoglycerate kinase activity
AAV29_RS16940	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AAV29_RS16945	COG2390	Transcriptional regulator
AAV29_RS16950	COG2814	Major facilitator Superfamily
AAV29_RS16955	COG1609	Transcriptional regulator
AAV29_RS16960	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AAV29_RS16970	COG0583	DNA-binding transcription factor activity
AAV29_RS16975	COG0697	spore germination
AAV29_RS16980	COG1113	amino acid transport
AAV29_RS16985	COG1737	Transcriptional regulator
AAV29_RS16990	COG1070	Carbohydrate kinase
AAV29_RS17015	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AAV29_RS17020	COG2186	Transcriptional regulator
AAV29_RS17025	COG1620	l-lactate permease
AAV29_RS17030	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
AAV29_RS17040	COG5039	Polysaccharide pyruvyl transferase
AAV29_RS17045	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AAV29_RS17050	COG0110	maltose O-acetyltransferase activity
AAV29_RS17055	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AAV29_RS17060	COG2244	polysaccharide biosynthetic process
AAV29_RS17065	COG1216	Glycosyl transferase, family 2
AAV29_RS17070	COG5039	Polysaccharide pyruvyl transferase
AAV29_RS17075	COG1216	Glycosyl transferase, family 2
AAV29_RS17085	COG0438	transferase activity, transferring glycosyl groups
AAV29_RS17090	COG1215	transferase activity, transferring glycosyl groups
AAV29_RS17095	COG0438	transferase activity, transferring glycosyl groups
AAV29_RS17100	COG1086	Polysaccharide biosynthesis protein
AAV29_RS17105	COG0489	protein tyrosine kinase activity
AAV29_RS17110	COG3944	biosynthesis protein
AAV29_RS17115	COG1396	sequence-specific DNA binding
AAV29_RS17120	COG2272	Belongs to the type-B carboxylesterase lipase family
AAV29_RS17130	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AAV29_RS17135	COG2364	Membrane
AAV29_RS17140	COG0456	acetyltransferase
AAV29_RS17145	COG3479	Phenolic acid decarboxylase
AAV29_RS17190	COG2223	nitrite transmembrane transporter activity
AAV29_RS17195	COG1609	Transcriptional regulator
AAV29_RS17205	COG0583	DNA-binding transcription factor activity
AAV29_RS17210	COG2828	Protein conserved in bacteria
AAV29_RS17215	COG2814	Major facilitator Superfamily
AAV29_RS17215	COG0477	Major facilitator Superfamily
AAV29_RS17220	COG1611	Belongs to the LOG family
AAV29_RS17225	COG1694	Mazg nucleotide pyrophosphohydrolase
AAV29_RS17230	COG0659	secondary active sulfate transmembrane transporter activity
AAV29_RS17235	COG0288	reversible hydration of carbon dioxide
AAV29_RS17245	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AAV29_RS17250	COG4290	ribonuclease
AAV29_RS17255	COG2162	N-hydroxyarylamine O-acetyltransferase activity
AAV29_RS17260	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AAV29_RS17270	COG0391	Required for morphogenesis under gluconeogenic growth conditions
AAV29_RS17280	COG1051	belongs to the nudix hydrolase family
AAV29_RS17285	COG0492	ferredoxin-NADP+ reductase activity
AAV29_RS17290	COG0791	NLP P60 protein
AAV29_RS17290	COG3883	PFAM NLP P60 protein
AAV29_RS17295	COG0457	Tetratricopeptide repeat
AAV29_RS17300	COG5002	protein histidine kinase activity
AAV29_RS17305	COG0745	RESPONSE REGULATOR receiver
AAV29_RS17315	COG1132	(ABC) transporter
AAV29_RS17320	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AAV29_RS17320	COG0140	phosphoribosyl-ATP diphosphatase activity
AAV29_RS17345	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AAV29_RS17360	COG4990	cell redox homeostasis
AAV29_RS17365	COG0110	maltose O-acetyltransferase activity
AAV29_RS17385	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AAV29_RS17395	COG2188	Transcriptional regulator
AAV29_RS17400	COG1309	transcriptional regulator
AAV29_RS17405	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AAV29_RS17410	COG1950	PFAM Membrane protein of
AAV29_RS17415	COG1983	PspC domain protein
AAV29_RS17420	COG3595	metallopeptidase activity
AAV29_RS17435	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AAV29_RS17445	COG4897	Protein conserved in bacteria
AAV29_RS17450	COG0574	Belongs to the PEP-utilizing enzyme family
AAV29_RS17450	COG3848	Pyruvate phosphate dikinase
AAV29_RS17455	COG1309	transcriptional regulator
AAV29_RS17460	COG2814	Major facilitator Superfamily
AAV29_RS17490	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AAV29_RS17500	COG0793	Belongs to the peptidase S41A family
AAV29_RS17500	COG3409	Peptidoglycan-binding domain 1 protein
AAV29_RS17505	COG3420	alginic acid biosynthetic process
AAV29_RS17510	COG2177	Part of the ABC transporter FtsEX involved in
AAV29_RS17515	COG2884	Cell division ATP-binding protein ftsE
AAV29_RS17520	COG2010	Cytochrome c
AAV29_RS17525	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AAV29_RS17530	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AAV29_RS17540	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AAV29_RS17555	COG1516	flagellar protein fliS
AAV29_RS17560	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
AAV29_RS17565	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AAV29_RS17585	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AAV29_RS17590	COG1256	bacterial-type flagellum assembly
AAV29_RS17590	COG4786	Flagellar basal body rod
AAV29_RS17595	COG3418	PFAM FlgN family protein
AAV29_RS17600	COG2747	anti-sigma28 factor FlgM
AAV29_RS17610	COG1040	competence protein
AAV29_RS17620	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
AAV29_RS17625	COG1307	EDD domain protein, DegV family
AAV29_RS17630	COG2197	response regulator
AAV29_RS17635	COG4585	Histidine kinase
AAV29_RS17640	COG1739	Uncharacterized protein family UPF0029
AAV29_RS17645	COG1316	TRANSCRIPTIONal
AAV29_RS17650	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AAV29_RS17655	COG0438	transferase activity, transferring glycosyl groups
AAV29_RS17660	COG1215	transferase activity, transferring glycosyl groups
AAV29_RS17665	COG3206	protein involved in exopolysaccharide biosynthesis
AAV29_RS17670	COG3307	-O-antigen
AAV29_RS17675	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AAV29_RS17680	COG0438	transferase activity, transferring glycosyl groups
AAV29_RS17680	COG0297	glycogen (starch) synthase activity
AAV29_RS17685	COG2244	polysaccharide biosynthetic process
AAV29_RS17695	COG0860	N-Acetylmuramoyl-L-alanine amidase
AAV29_RS17695	COG2247	cell wall binding repeat
AAV29_RS17700	COG2385	sporulation resulting in formation of a cellular spore
AAV29_RS17700	COG2247	cell wall binding repeat
AAV29_RS17710	COG1316	TRANSCRIPTIONal
AAV29_RS17715	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AAV29_RS17720	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AAV29_RS17725	COG1134	teichoic acid transport
AAV29_RS17730	COG1682	transport, permease protein
AAV29_RS17735	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AAV29_RS17745	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AAV29_RS17750	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
AAV29_RS17755	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AAV29_RS17760	COG4193	domain, Protein
AAV29_RS17765	COG1482	cell wall glycoprotein biosynthetic process
AAV29_RS17770	COG0697	spore germination
AAV29_RS17775	COG0814	amino acid
AAV29_RS17785	COG1215	transferase activity, transferring glycosyl groups
AAV29_RS17790	COG2814	Major facilitator Superfamily
AAV29_RS17795	COG1316	TRANSCRIPTIONal
AAV29_RS17800	COG0561	phosphatase activity
AAV29_RS17805	COG2433	Pfam Transposase IS66
AAV29_RS17810	COG0791	NLP P60 protein
AAV29_RS17815	COG2843	Capsule synthesis protein
AAV29_RS17825	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AAV29_RS17830	COG0697	spore germination
AAV29_RS17835	COG0814	amino acid
AAV29_RS17845	COG1609	Transcriptional regulator
AAV29_RS17850	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AAV29_RS17860	COG1129	ABC transporter
AAV29_RS17865	COG1172	Belongs to the binding-protein-dependent transport system permease family
AAV29_RS17870	COG1879	ABC-type sugar transport system periplasmic component
AAV29_RS17875	COG3103	Sh3 type 3 domain protein
AAV29_RS17880	COG2249	NAD(P)H dehydrogenase (quinone) activity
AAV29_RS17885	COG3527	Alpha-acetolactate decarboxylase
AAV29_RS17890	COG0028	Belongs to the TPP enzyme family
AAV29_RS17895	COG0583	DNA-binding transcription factor activity
AAV29_RS17900	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AAV29_RS17915	COG5337	Spore coat protein CotH
AAV29_RS17925	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AAV29_RS17935	COG0405	Gamma-glutamyltransferase
AAV29_RS17940	COG1522	sequence-specific DNA binding
AAV29_RS17945	COG2059	Chromate
AAV29_RS17950	COG2059	Chromate
AAV29_RS17960	COG0655	NAD(P)H dehydrogenase (quinone) activity
AAV29_RS17965	COG0583	DNA-binding transcription factor activity
AAV29_RS17985	COG5444	nuclease activity
AAV29_RS18000	COG3878	Protein conserved in bacteria
AAV29_RS18005	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AAV29_RS18010	COG4464	protein tyrosine phosphatase activity
AAV29_RS18015	COG0489	protein tyrosine kinase activity
AAV29_RS18020	COG3944	biosynthesis protein
AAV29_RS18030	COG4715	Zinc finger, swim domain protein
AAV29_RS18035	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AAV29_RS18040	COG0561	phosphatase activity
AAV29_RS18045	COG1349	DNA-binding transcription factor activity
AAV29_RS18050	COG0629	single-stranded DNA binding
AAV29_RS18075	COG0457	Tetratricopeptide repeat
AAV29_RS18080	COG4786	Flagellar basal body rod
AAV29_RS18085	COG4786	Flagellar basal body rod
AAV29_RS18090	COG1077	Cell shape determining protein MreB Mrl
AAV29_RS18095	COG1609	Transcriptional regulator
AAV29_RS18100	COG1846	Transcriptional regulator
AAV29_RS18105	COG2814	Major facilitator Superfamily
AAV29_RS18110	COG1953	Uracil, thiamine, allantoin
AAV29_RS18115	COG0477	Major facilitator Superfamily
AAV29_RS18120	COG1335	isochorismatase
AAV29_RS18125	COG0004	ammonium transporteR
AAV29_RS18130	COG0347	Belongs to the P(II) protein family
AAV29_RS18135	COG0772	Belongs to the SEDS family
AAV29_RS18140	COG0671	phosphoesterase, PA-phosphatase related
AAV29_RS18150	COG0739	heme binding
AAV29_RS18155	COG1247	-acetyltransferase
AAV29_RS18170	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AAV29_RS18185	COG0726	polysaccharide deacetylase
AAV29_RS18195	COG1959	2 iron, 2 sulfur cluster binding
AAV29_RS18210	COG0831	urea catabolic process
AAV29_RS18215	COG3237	CsbD-like
AAV29_RS18220	COG1994	Peptidase M50
AAV29_RS18225	COG0457	Tetratricopeptide repeat
AAV29_RS18235	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AAV29_RS18240	COG2304	oxidoreductase activity
AAV29_RS18245	COG2304	oxidoreductase activity
AAV29_RS18250	COG2385	sporulation resulting in formation of a cellular spore
AAV29_RS18255	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AAV29_RS18265	COG4836	Membrane
AAV29_RS18335	COG0698	ribose 5-phosphate isomerase
AAV29_RS18340	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AAV29_RS18350	COG0009	L-threonylcarbamoyladenylate synthase
AAV29_RS18355	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AAV29_RS18375	COG2890	protein-(glutamine-N5) methyltransferase activity
AAV29_RS18380	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AAV29_RS18385	COG0346	lactoylglutathione lyase activity
AAV29_RS18390	COG0789	Transcriptional regulator
AAV29_RS18395	COG0679	Auxin Efflux Carrier
AAV29_RS18400	COG0281	malic enzyme
AAV29_RS18415	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AAV29_RS18420	COG1494	fructose-1,6-bisphosphatase
AAV29_RS18425	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AAV29_RS18435	COG0191	fructose-bisphosphate aldolase activity
AAV29_RS18440	COG2204	response regulator
AAV29_RS18445	COG4821	SIS domain
AAV29_RS18460	COG0247	lactate metabolic process
AAV29_RS18460	COG2181	nitrate reductase activity
AAV29_RS18465	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AAV29_RS18480	COG1132	(ABC) transporter
AAV29_RS18485	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AAV29_RS18495	COG2181	nitrate reductase activity
AAV29_RS18500	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
AAV29_RS18505	COG1140	nitrate reductase beta subunit
AAV29_RS18510	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AAV29_RS18515	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AAV29_RS18525	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AAV29_RS18530	COG2223	nitrite transmembrane transporter activity
AAV29_RS18540	COG4506	Protein conserved in bacteria
AAV29_RS18545	COG0457	Tetratricopeptide repeat
AAV29_RS18580	COG0010	Belongs to the arginase family
AAV29_RS18585	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
AAV29_RS18590	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AAV29_RS18605	COG1994	Peptidase M50
AAV29_RS18610	COG1942	4-Oxalocrotonate Tautomerase
AAV29_RS18615	COG1846	Transcriptional regulator
AAV29_RS18625	COG0531	amino acid
AAV29_RS18630	COG3465	dGTPase activity
AAV29_RS18635	COG1078	dGTPase activity
AAV29_RS18650	COG1695	Transcriptional regulator
AAV29_RS18660	COG1131	(ABC) transporter
AAV29_RS18665	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
AAV29_RS18695	COG0583	DNA-binding transcription factor activity
AAV29_RS18700	COG2855	membrane
AAV29_RS18705	COG0280	phosphate acetyltransferase
AAV29_RS18715	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS18720	COG0436	Aminotransferase
AAV29_RS18750	COG2814	Major facilitator Superfamily
AAV29_RS18755	COG2814	Major facilitator Superfamily
AAV29_RS18760	COG0833	amino acid
AAV29_RS18765	COG4187	Peptidase family M20/M25/M40
AAV29_RS18770	COG1012	belongs to the aldehyde dehydrogenase family
AAV29_RS18775	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AAV29_RS18785	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
AAV29_RS18790	COG1091	dTDP-4-dehydrorhamnose reductase activity
AAV29_RS18795	COG1088	dTDP-glucose 4,6-dehydratase activity
AAV29_RS18800	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AAV29_RS18805	COG3980	spore coat polysaccharide biosynthesis protein
AAV29_RS18810	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
AAV29_RS18815	COG2089	acid synthase
AAV29_RS18820	COG0456	acetyltransferase
AAV29_RS18825	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AAV29_RS18830	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AAV29_RS18835	COG0463	Glycosyl transferase, family 2
AAV29_RS18845	COG2363	Small membrane protein
AAV29_RS18850	COG2233	PERMEase
AAV29_RS18865	COG1216	Glycosyl transferase, family 2
AAV29_RS18880	COG1695	Transcriptional regulator
AAV29_RS18885	COG0351	phosphomethylpyrimidine kinase
AAV29_RS18895	COG1621	beta-fructofuranosidase activity
AAV29_RS18900	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AAV29_RS18900	COG1263	PTS System
AAV29_RS18905	COG3711	transcriptional antiterminator
AAV29_RS18915	COG1404	Belongs to the peptidase S8 family
AAV29_RS18920	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AAV29_RS18925	COG0778	Nitroreductase
AAV29_RS18930	COG0772	Belongs to the SEDS family
AAV29_RS18935	COG0454	-acetyltransferase
AAV29_RS18955	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AAV29_RS18960	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AAV29_RS18965	COG2261	transglycosylase associated protein
AAV29_RS18970	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
AAV29_RS18975	COG2246	polysaccharide biosynthetic process
AAV29_RS18980	COG1309	transcriptional regulator
AAV29_RS19000	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
AAV29_RS19005	COG2837	iron assimilation
AAV29_RS19025	COG0583	DNA-binding transcription factor activity
AAV29_RS19035	COG1346	cytolysis
AAV29_RS19040	COG4895	conserved protein (DUF2196)
AAV29_RS19045	COG0789	Transcriptional regulator
AAV29_RS19050	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
AAV29_RS19055	COG0346	lactoylglutathione lyase activity
AAV29_RS19060	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AAV29_RS19065	COG1404	Belongs to the peptidase S8 family
AAV29_RS19070	COG1442	glycosyl transferase family 8
AAV29_RS19075	COG2357	RelA SpoT domain protein
AAV29_RS19080	COG1575	Belongs to the MenA family. Type 1 subfamily
AAV29_RS19095	COG1696	Membrane protein involved in D-alanine export
AAV29_RS19105	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
AAV29_RS19110	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AAV29_RS19115	COG1486	melibiose metabolic process
AAV29_RS19120	COG1447	Phosphotransferase system cellobiose-specific component IIA
AAV29_RS19125	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AAV29_RS19130	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AAV29_RS19135	COG3711	transcriptional antiterminator
AAV29_RS19135	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AAV29_RS19145	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AAV29_RS19150	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AAV29_RS19160	COG0640	Transcriptional regulator
AAV29_RS19165	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AAV29_RS19170	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AAV29_RS19175	COG1447	Phosphotransferase system cellobiose-specific component IIA
AAV29_RS19180	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AAV29_RS19185	COG2723	6-phospho-beta-galactosidase activity
AAV29_RS19190	COG1940	carbohydrate kinase activity
AAV29_RS19195	COG1482	cell wall glycoprotein biosynthetic process
AAV29_RS19205	COG0753	catalase activity
AAV29_RS19210	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
AAV29_RS19215	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
AAV29_RS19220	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AAV29_RS19225	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AAV29_RS19230	COG4988	ABC transporter
AAV29_RS19235	COG1294	oxidase, subunit
AAV29_RS19240	COG1271	oxidase subunit
AAV29_RS19245	COG3493	citrate carrier protein
AAV29_RS19250	COG0726	polysaccharide deacetylase
AAV29_RS19255	COG3842	ATPase activity
AAV29_RS19260	COG2508	Transcriptional regulator
AAV29_RS19265	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AAV29_RS19275	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AAV29_RS19285	COG4894	glucomannan catabolic process
AAV29_RS19290	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AAV29_RS19295	COG0500	methyltransferase
AAV29_RS19300	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AAV29_RS19315	COG0753	catalase activity
AAV29_RS19315	COG0693	protein deglycase activity
AAV29_RS19320	COG2851	Citrate transporter
AAV29_RS19325	COG2273	Hydrolase Family 16
AAV29_RS19335	COG2270	Major facilitator Superfamily
AAV29_RS19340	COG0513	Belongs to the DEAD box helicase family
AAV29_RS19390	COG0697	spore germination
AAV29_RS19395	COG0589	response to stress
AAV29_RS19410	COG0494	nUDIX hydrolase
AAV29_RS19415	COG3507	Belongs to the glycosyl hydrolase 43 family
AAV29_RS19440	COG0010	Belongs to the arginase family
AAV29_RS19445	COG0833	amino acid
AAV29_RS19450	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
AAV29_RS19455	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AAV29_RS19465	COG2390	Transcriptional regulator
AAV29_RS19470	COG0561	phosphatase activity
AAV29_RS19500	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AAV29_RS19505	COG5294	Protein conserved in bacteria
AAV29_RS19510	COG0577	efflux transmembrane transporter activity
AAV29_RS19515	COG1136	(ABC) transporter
AAV29_RS19520	COG2205	protein histidine kinase activity
AAV29_RS19525	COG0745	RESPONSE REGULATOR receiver
AAV29_RS19540	COG1082	Xylose isomerase domain protein TIM barrel
AAV29_RS19550	COG2814	Major facilitator Superfamily
AAV29_RS19580	COG1349	DNA-binding transcription factor activity
AAV29_RS19585	COG0667	Aldo Keto reductase
AAV29_RS19590	COG2814	Major facilitator Superfamily
AAV29_RS19605	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS19610	COG2197	response regulator
AAV29_RS19615	COG4585	Histidine kinase
AAV29_RS19620	COG3239	Fatty acid desaturase
AAV29_RS19630	COG1309	transcriptional regulator
AAV29_RS19635	COG1012	belongs to the aldehyde dehydrogenase family
AAV29_RS19640	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AAV29_RS19650	COG0640	Transcriptional regulator
AAV29_RS19655	COG2814	Major facilitator Superfamily
AAV29_RS19660	COG1714	RDD family
AAV29_RS19670	COG0450	alkyl hydroperoxide reductase
AAV29_RS19675	COG3634	alkyl hydroperoxide reductase activity
AAV29_RS19680	COG1113	amino acid transport
AAV29_RS19690	COG2080	2 iron, 2 sulfur cluster binding
AAV29_RS19705	COG2068	MobA-Related Protein
AAV29_RS19710	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
AAV29_RS19730	COG1192	Involved in chromosome partitioning
AAV29_RS19755	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
AAV29_RS19760	COG0667	Aldo Keto reductase
AAV29_RS19765	COG0456	acetyltransferase
AAV29_RS19770	COG0457	Tetratricopeptide repeat
AAV29_RS19775	COG0010	Belongs to the arginase family
AAV29_RS19780	COG0833	amino acid
AAV29_RS19785	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AAV29_RS19790	COG3829	transcription factor binding
AAV29_RS19800	COG0488	(ABC) transporter
AAV29_RS19815	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AAV29_RS19820	COG5002	protein histidine kinase activity
AAV29_RS19835	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AAV29_RS19840	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AAV29_RS19845	COG4853	Protein conserved in bacteria
AAV29_RS19850	COG4863	YycH protein
AAV29_RS19855	COG5002	protein histidine kinase activity
AAV29_RS19860	COG0745	RESPONSE REGULATOR receiver
AAV29_RS19895	COG0346	lactoylglutathione lyase activity
AAV29_RS19900	COG0305	Participates in initiation and elongation during chromosome replication
AAV29_RS19920	COG0297	glycogen (starch) synthase activity
AAV29_RS19930	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
AAV29_RS19935	COG0438	transferase activity, transferring glycosyl groups
AAV29_RS19945	COG0515	serine threonine protein kinase
AAV29_RS19955	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
AAV29_RS19960	COG4241	membrane
AAV29_RS19970	COG5577	PFAM Coat F domain
AAV29_RS19975	COG1733	regulation of RNA biosynthetic process
AAV29_RS19985	COG0697	spore germination
AAV29_RS19990	COG1621	beta-fructofuranosidase activity
AAV29_RS19995	COG1621	beta-fructofuranosidase activity
AAV29_RS20000	COG1802	Transcriptional regulator
AAV29_RS20005	COG2318	DinB family
AAV29_RS20010	COG2211	Major facilitator Superfamily
AAV29_RS20020	COG0778	Nitroreductase
AAV29_RS20025	COG1846	Transcriptional regulator
AAV29_RS20030	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AAV29_RS20035	COG1846	Transcriptional regulator
AAV29_RS20050	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AAV29_RS20055	COG0583	DNA-binding transcription factor activity
AAV29_RS20060	COG1028	Short-chain dehydrogenase reductase Sdr
AAV29_RS20065	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AAV29_RS20070	COG0697	spore germination
AAV29_RS20080	COG1959	2 iron, 2 sulfur cluster binding
AAV29_RS20090	COG1331	Highly conserved protein containing a thioredoxin domain
AAV29_RS20095	COG1266	CAAX protease self-immunity
AAV29_RS20100	COG2814	Major facilitator Superfamily
AAV29_RS20100	COG0477	Major facilitator Superfamily
AAV29_RS20105	COG0346	lactoylglutathione lyase activity
AAV29_RS20110	COG1609	Transcriptional regulator
AAV29_RS20115	COG0708	Exodeoxyribonuclease III
AAV29_RS20120	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AAV29_RS20125	COG2169	Transcriptional regulator
AAV29_RS20135	COG0629	single-stranded DNA binding
AAV29_RS20145	COG0012	GTP binding
AAV29_RS20150	COG0243	molybdopterin cofactor binding
AAV29_RS20155	COG4481	Protein conserved in bacteria
AAV29_RS20160	COG3949	Membrane
AAV29_RS20175	COG1475	DNA binding
AAV29_RS20180	COG1192	Involved in chromosome partitioning
AAV29_RS20205	COG1847	R3H domain protein
AAV29_RS20210	COG0706	membrane insertase activity
AAV29_RS20230	COG1793	dna ligase
AAV29_RS20250	COG5632	N-Acetylmuramoyl-L-alanine amidase