CRH11_RS00045	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS00150	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CRH11_RS00150	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH11_RS00150	SM00319	Homologues of the ligand binding domain of Tar
CRH11_RS00155	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CRH11_RS00155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH11_RS00155	SM00319	Homologues of the ligand binding domain of Tar
CRH11_RS00160	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CRH11_RS00160	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH11_RS00160	SM00319	Homologues of the ligand binding domain of Tar
CRH11_RS00165	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CRH11_RS00165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH11_RS00165	SM00319	Homologues of the ligand binding domain of Tar
CRH11_RS00190	SM00642	Alpha-amylase domain
CRH11_RS00195	SM01091	Transporter associated domain
CRH11_RS00265	SM00316	Ribosomal protein S1-like RNA-binding domain
CRH11_RS00275	SM00344	helix_turn_helix ASNC type
CRH11_RS00295	SM00387	Histidine kinase-like ATPases
CRH11_RS00295	SM00388	His Kinase A (phosphoacceptor) domain
CRH11_RS00300	SM01298	CRH11_RS00300
CRH11_RS00305	SM00479	CRH11_RS00305
CRH11_RS00330	SM00091	PAS domain
CRH11_RS00330	SM00387	Histidine kinase-like ATPases
CRH11_RS00335	SM00448	cheY-homologous receiver domain
CRH11_RS00345	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS00405	SM00421	helix_turn_helix, Lux Regulon
CRH11_RS00405	SM00448	cheY-homologous receiver domain
CRH11_RS00410	SM00387	Histidine kinase-like ATPases
CRH11_RS00440	SM00052	Putative diguanylate phosphodiesterase
CRH11_RS00480	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CRH11_RS00525	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CRH11_RS00525	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CRH11_RS00535	SM00923	MbtH-like protein
CRH11_RS00540	SM00823	Phosphopantetheine attachment site
CRH11_RS00540	SM00824	Thioesterase
CRH11_RS00560	SM00822	CRH11_RS00560
CRH11_RS00620	SM01240	CRH11_RS00620
CRH11_RS00635	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS00750	SM00729	Elongator protein 3, MiaB family, Radical SAM
CRH11_RS00820	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS00825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS00825	SM00866	CRH11_RS00825
CRH11_RS00855	SM00422	helix_turn_helix, mercury resistance
CRH11_RS00870	SM00465	GIY-YIG type nucleases (URI domain)
CRH11_RS00915	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS00940	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS00940	SM00930	CRH11_RS00940
CRH11_RS00955	SM00493	CRH11_RS00955
CRH11_RS01010	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS01040	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS01055	SM00822	CRH11_RS01055
CRH11_RS01065	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CRH11_RS01070	SM00448	cheY-homologous receiver domain
CRH11_RS01070	SM00862	Transcriptional regulatory protein, C terminal
CRH11_RS01075	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH11_RS01075	SM00387	Histidine kinase-like ATPases
CRH11_RS01075	SM00388	His Kinase A (phosphoacceptor) domain
CRH11_RS01115	SM00421	helix_turn_helix, Lux Regulon
CRH11_RS01115	SM00448	cheY-homologous receiver domain
CRH11_RS01120	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH11_RS01120	SM00387	Histidine kinase-like ATPases
CRH11_RS01155	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS01180	SM00387	Histidine kinase-like ATPases
CRH11_RS01180	SM00388	His Kinase A (phosphoacceptor) domain
CRH11_RS01185	SM00448	cheY-homologous receiver domain
CRH11_RS01185	SM00862	Transcriptional regulatory protein, C terminal
CRH11_RS01205	SM00835	Cupin
CRH11_RS01220	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS01280	SM00421	helix_turn_helix, Lux Regulon
CRH11_RS01280	SM00448	cheY-homologous receiver domain
CRH11_RS01290	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS01390	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS01425	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS01440	SM00062	Bacterial periplasmic substrate-binding proteins
CRH11_RS01445	SM00062	Bacterial periplasmic substrate-binding proteins
CRH11_RS01480	SM00316	Ribosomal protein S1-like RNA-binding domain
CRH11_RS01480	SM00357	Cold shock protein domain
CRH11_RS01480	SM00955	CRH11_RS01480
CRH11_RS01495	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS01500	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS01505	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS01515	SM00387	Histidine kinase-like ATPases
CRH11_RS01515	SM00388	His Kinase A (phosphoacceptor) domain
CRH11_RS01520	SM00448	cheY-homologous receiver domain
CRH11_RS01520	SM00862	Transcriptional regulatory protein, C terminal
CRH11_RS01535	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS01555	SM00116	Domain in cystathionine beta-synthase and other proteins.
CRH11_RS01555	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS01580	SM00116	Domain in cystathionine beta-synthase and other proteins.
CRH11_RS01580	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS01650	SM00984	UDP binding domain
CRH11_RS01660	SM01192	CRH11_RS01660
CRH11_RS01660	SM01193	CRH11_RS01660
CRH11_RS01685	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CRH11_RS01700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS01740	SM00354	helix_turn _helix lactose operon repressor
CRH11_RS01790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS01790	SM00895	CRH11_RS01790
CRH11_RS01885	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS01965	SM00640	Glycosyl hydrolases family 32
CRH11_RS01975	SM00354	helix_turn _helix lactose operon repressor
CRH11_RS02015	SM00947	Carbonic anhydrase
CRH11_RS02075	SM00028	Tetratricopeptide repeats
CRH11_RS02080	SM00387	Histidine kinase-like ATPases
CRH11_RS02080	SM00388	His Kinase A (phosphoacceptor) domain
CRH11_RS02085	SM00448	cheY-homologous receiver domain
CRH11_RS02085	SM00862	Transcriptional regulatory protein, C terminal
CRH11_RS02090	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS02170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS02170	SM00866	CRH11_RS02170
CRH11_RS02210	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS02215	SM00487	DEAD-like helicases superfamily
CRH11_RS02215	SM00490	helicase superfamily c-terminal domain
CRH11_RS02250	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CRH11_RS02260	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CRH11_RS02260	SM00245	tail specific protease
CRH11_RS02265	SM00710	Parallel beta-helix repeats
CRH11_RS02265	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
CRH11_RS02275	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS02295	SM00957	SecA DEAD-like domain
CRH11_RS02295	SM00958	SecA preprotein cross-linking domain
CRH11_RS02380	SM00487	DEAD-like helicases superfamily
CRH11_RS02380	SM00490	helicase superfamily c-terminal domain
CRH11_RS02390	SM00421	helix_turn_helix, Lux Regulon
CRH11_RS02390	SM00448	cheY-homologous receiver domain
CRH11_RS02395	SM00387	Histidine kinase-like ATPases
CRH11_RS02435	SM00984	UDP binding domain
CRH11_RS02455	SM00646	CRH11_RS02455
CRH11_RS02485	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS02520	SM00047	Lysozyme subfamily 2
CRH11_RS02520	SM00287	Bacterial SH3 domain homologues
CRH11_RS02580	SM00854	Bacterial capsule synthesis protein PGA_cap
CRH11_RS02615	SM00354	helix_turn _helix lactose operon repressor
CRH11_RS02630	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS02645	SM00287	Bacterial SH3 domain homologues
CRH11_RS02695	SM00903	Flavin reductase like domain
CRH11_RS02710	SM00344	helix_turn_helix ASNC type
CRH11_RS02735	SM00860	SMI1 / KNR4 family
CRH11_RS02780	SM00984	UDP binding domain
CRH11_RS02815	SM00487	DEAD-like helicases superfamily
CRH11_RS02815	SM00490	helicase superfamily c-terminal domain
CRH11_RS02825	SM00420	helix_turn_helix, Deoxyribose operon repressor
CRH11_RS02825	SM01134	CRH11_RS02825
CRH11_RS02855	SM00028	Tetratricopeptide repeats
CRH11_RS02880	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS02910	SM00938	Nitrogen regulatory protein P-II
CRH11_RS02920	SM00014	Acid phosphatase homologues
CRH11_RS02950	SM00155	Phospholipase D. Active site motifs.
CRH11_RS03005	SM00028	Tetratricopeptide repeats
CRH11_RS03010	SM00729	Elongator protein 3, MiaB family, Radical SAM
CRH11_RS03025	SM00327	von Willebrand factor (vWF) type A domain
CRH11_RS03030	SM00327	von Willebrand factor (vWF) type A domain
CRH11_RS03070	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS03130	SM00226	Low molecular weight phosphatase family
CRH11_RS03170	SM00937	CRH11_RS03170
CRH11_RS03190	SM00919	Malic enzyme, NAD binding domain
CRH11_RS03190	SM01274	CRH11_RS03190
CRH11_RS03205	SM00357	Cold shock protein domain
CRH11_RS03205	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS03205	SM00959	Rho termination factor, N-terminal domain
CRH11_RS03230	SM00448	cheY-homologous receiver domain
CRH11_RS03255	SM00155	Phospholipase D. Active site motifs.
CRH11_RS03270	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS03275	SM00155	Phospholipase D. Active site motifs.
CRH11_RS03300	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CRH11_RS03315	SM00100	Cyclic nucleotide-monophosphate binding domain
CRH11_RS03315	SM00419	helix_turn_helix, cAMP Regulatory protein
CRH11_RS03325	SM00836	DALR anticodon binding domain
CRH11_RS03325	SM01016	Arginyl tRNA synthetase N terminal dom
CRH11_RS03355	SM00028	Tetratricopeptide repeats
CRH11_RS03365	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS03395	SM00421	helix_turn_helix, Lux Regulon
CRH11_RS03435	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS03455	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CRH11_RS03480	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS03595	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CRH11_RS03600	SM00387	Histidine kinase-like ATPases
CRH11_RS03600	SM00388	His Kinase A (phosphoacceptor) domain
CRH11_RS03605	SM00448	cheY-homologous receiver domain
CRH11_RS03605	SM00862	Transcriptional regulatory protein, C terminal
CRH11_RS03620	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS03655	SM00858	CRH11_RS03655
CRH11_RS03700	SM00986	Uracil DNA glycosylase superfamily
CRH11_RS03700	SM00987	UreE urease accessory protein, C-terminal domain 
CRH11_RS03735	SM00640	Glycosyl hydrolases family 32
CRH11_RS03745	SM01061	CAT RNA binding domain
CRH11_RS03885	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS03920	SM00422	helix_turn_helix, mercury resistance
CRH11_RS03930	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CRH11_RS03960	SM00954	Region found in RelA / SpoT proteins
CRH11_RS04055	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH11_RS04100	SM01060	CRH11_RS04100
CRH11_RS04120	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS04125	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS04150	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS04210	SM01060	CRH11_RS04210
CRH11_RS04225	SM01061	CAT RNA binding domain
CRH11_RS04235	SM00487	DEAD-like helicases superfamily
CRH11_RS04235	SM00490	helicase superfamily c-terminal domain
CRH11_RS04265	SM00656	CRH11_RS04265
CRH11_RS04360	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CRH11_RS04370	SM01133	CRH11_RS04370
CRH11_RS04425	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS04430	SM00387	Histidine kinase-like ATPases
CRH11_RS04435	SM00448	cheY-homologous receiver domain
CRH11_RS04435	SM00862	Transcriptional regulatory protein, C terminal
CRH11_RS04490	SM00420	helix_turn_helix, Deoxyribose operon repressor
CRH11_RS04490	SM01134	CRH11_RS04490
CRH11_RS04505	SM00387	Histidine kinase-like ATPases
CRH11_RS04520	SM00421	helix_turn_helix, Lux Regulon
CRH11_RS04520	SM00448	cheY-homologous receiver domain
CRH11_RS04550	SM00564	beta-propeller repeat
CRH11_RS04560	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH11_RS04610	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CRH11_RS04615	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CRH11_RS04690	SM00028	Tetratricopeptide repeats
CRH11_RS04715	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH11_RS04720	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS04725	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CRH11_RS04730	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS04750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH11_RS04750	SM00387	Histidine kinase-like ATPases
CRH11_RS04750	SM00388	His Kinase A (phosphoacceptor) domain
CRH11_RS04760	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CRH11_RS04765	SM00849	Metallo-beta-lactamase superfamily
CRH11_RS04780	SM00091	PAS domain
CRH11_RS04780	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH11_RS04780	SM00387	Histidine kinase-like ATPases
CRH11_RS04780	SM00388	His Kinase A (phosphoacceptor) domain
CRH11_RS04785	SM00448	cheY-homologous receiver domain
CRH11_RS04785	SM00862	Transcriptional regulatory protein, C terminal
CRH11_RS04815	SM00788	Adenylosuccinate synthetase
CRH11_RS04825	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS04895	SM00267	diguanylate cyclase
CRH11_RS04920	SM01131	CRH11_RS04920
CRH11_RS04935	SM00640	Glycosyl hydrolases family 32
CRH11_RS04940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS04940	SM00895	CRH11_RS04940
CRH11_RS04975	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS04985	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS05015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS05030	SM00857	Resolvase, N terminal domain
CRH11_RS05035	SM00028	Tetratricopeptide repeats
CRH11_RS05135	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS05170	SM00354	helix_turn _helix lactose operon repressor
CRH11_RS05185	SM00342	helix_turn_helix, arabinose operon control protein
CRH11_RS05210	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CRH11_RS05235	SM00470	ParB-like nuclease domain
CRH11_RS05245	SM00470	ParB-like nuclease domain
CRH11_RS05255	SM01228	CRH11_RS05255
CRH11_RS05265	SM00393	Putative single-stranded nucleic acids-binding domain
CRH11_RS05265	SM01245	CRH11_RS05265
CRH11_RS05285	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS05285	SM00760	Bacterial dnaA protein helix-turn-helix domain
CRH11_RS05290	SM00480	DNA polymerase III beta subunit
CRH11_RS05310	SM00387	Histidine kinase-like ATPases
CRH11_RS05310	SM00433	TopoisomeraseII
CRH11_RS05315	SM00434	DNA Topoisomerase IV
CRH11_RS05350	SM00116	Domain in cystathionine beta-synthase and other proteins.
CRH11_RS05350	SM01240	CRH11_RS05350
CRH11_RS05355	SM00936	Penicillin-binding protein 5, C-terminal domain 
CRH11_RS05395	SM00257	Lysin motif
CRH11_RS05395	SM00636	CRH11_RS05395
CRH11_RS05415	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS05425	SM00493	CRH11_RS05425
CRH11_RS05520	SM00465	GIY-YIG type nucleases (URI domain)
CRH11_RS05530	SM00966	SpoVT / AbrB like domain 
CRH11_RS05545	SM01208	CRH11_RS05545
CRH11_RS05550	SM00493	CRH11_RS05550
CRH11_RS05555	SM00650	Ribosomal RNA adenine dimethylases
CRH11_RS05600	SM01400	CRH11_RS05600
CRH11_RS05620	SM00487	DEAD-like helicases superfamily
CRH11_RS05620	SM00490	helicase superfamily c-terminal domain
CRH11_RS05620	SM00982	CRH11_RS05620
CRH11_RS05620	SM01058	CarD-like/TRCF domain
CRH11_RS05625	SM00966	SpoVT / AbrB like domain 
CRH11_RS05640	SM00363	S4 RNA-binding domain
CRH11_RS05660	SM00316	Ribosomal protein S1-like RNA-binding domain
CRH11_RS05675	SM00331	Sigma factor PP2C-like phosphatases
CRH11_RS05675	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CRH11_RS05685	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH11_RS05690	SM00977	TilS substrate C-terminal domain
CRH11_RS05700	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS05745	SM00905	Dihydroneopterin aldolase
CRH11_RS05755	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS05865	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS05865	SM01086	C-terminal, D2-small domain, of ClpB protein
CRH11_RS05870	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS05880	SM00670	Large family of predicted nucleotide-binding domains
CRH11_RS05905	SM00840	CRH11_RS05905
CRH11_RS05910	SM00535	Ribonuclease III family
CRH11_RS05915	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CRH11_RS05940	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CRH11_RS05940	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CRH11_RS05945	SM00649	Ribosomal protein L11/L12
CRH11_RS05975	SM00663	RNA polymerase I subunit A N-terminus
CRH11_RS05995	SM00838	Elongation factor G C-terminus
CRH11_RS05995	SM00889	Elongation factor G, domain IV
CRH11_RS06010	SM01403	CRH11_RS06010
CRH11_RS06030	SM01382	CRH11_RS06030
CRH11_RS06030	SM01383	CRH11_RS06030
CRH11_RS06045	SM00322	K homology RNA-binding domain
CRH11_RS06065	SM01374	CRH11_RS06065
CRH11_RS06070	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CRH11_RS06135	SM00316	Ribosomal protein S1-like RNA-binding domain
CRH11_RS06155	SM00662	RNA polymerases D
CRH11_RS06165	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS06170	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS06210	SM00646	CRH11_RS06210
CRH11_RS06225	SM01251	CRH11_RS06225
CRH11_RS06305	SM00829	Enoylreductase
CRH11_RS06340	SM00342	helix_turn_helix, arabinose operon control protein
CRH11_RS06445	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS06480	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS06500	SM00421	helix_turn_helix, Lux Regulon
CRH11_RS06500	SM00448	cheY-homologous receiver domain
CRH11_RS06505	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS06600	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS06635	SM00450	Rhodanese Homology Domain
CRH11_RS06670	SM00387	Histidine kinase-like ATPases
CRH11_RS06675	SM00448	cheY-homologous receiver domain
CRH11_RS06775	SM00870	CRH11_RS06775
CRH11_RS06815	SM00028	Tetratricopeptide repeats
CRH11_RS06825	SM00642	Alpha-amylase domain
CRH11_RS06835	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS06885	SM00116	Domain in cystathionine beta-synthase and other proteins.
CRH11_RS06885	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS06915	SM00632	CRH11_RS06915
CRH11_RS06915	SM00642	Alpha-amylase domain
CRH11_RS06930	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS07035	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CRH11_RS07050	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CRH11_RS07090	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CRH11_RS07105	SM00823	Phosphopantetheine attachment site
CRH11_RS07110	SM00823	Phosphopantetheine attachment site
CRH11_RS07115	SM00823	Phosphopantetheine attachment site
CRH11_RS07140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS07155	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS07165	SM00062	Bacterial periplasmic substrate-binding proteins
CRH11_RS07205	SM00710	Parallel beta-helix repeats
CRH11_RS07205	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
CRH11_RS07240	SM00062	Bacterial periplasmic substrate-binding proteins
CRH11_RS07250	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS07265	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS07275	SM00448	cheY-homologous receiver domain
CRH11_RS07275	SM00862	Transcriptional regulatory protein, C terminal
CRH11_RS07280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH11_RS07280	SM00387	Histidine kinase-like ATPases
CRH11_RS07280	SM00388	His Kinase A (phosphoacceptor) domain
CRH11_RS07285	SM00028	Tetratricopeptide repeats
CRH11_RS07315	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS07345	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH11_RS07350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS07385	SM00420	helix_turn_helix, Deoxyribose operon repressor
CRH11_RS07440	SM00796	Allophanate hydrolase subunit 1
CRH11_RS07445	SM00797	Allophanate hydrolase subunit 2
CRH11_RS07450	SM00346	helix_turn_helix isocitrate lyase regulation
CRH11_RS07520	SM00344	helix_turn_helix ASNC type
CRH11_RS07525	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CRH11_RS07525	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CRH11_RS07525	SM00493	CRH11_RS07525
CRH11_RS07535	SM00267	diguanylate cyclase
CRH11_RS07590	SM00028	Tetratricopeptide repeats
CRH11_RS07680	SM00091	PAS domain
CRH11_RS07680	SM00387	Histidine kinase-like ATPases
CRH11_RS07685	SM00448	cheY-homologous receiver domain
CRH11_RS07700	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS07750	SM00487	DEAD-like helicases superfamily
CRH11_RS07750	SM00490	helicase superfamily c-terminal domain
CRH11_RS07780	SM01005	Alanine racemase, C-terminal domain
CRH11_RS07805	SM00387	Histidine kinase-like ATPases
CRH11_RS07810	SM00331	Sigma factor PP2C-like phosphatases
CRH11_RS07830	SM00331	Sigma factor PP2C-like phosphatases
CRH11_RS07830	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CRH11_RS07835	SM00316	Ribosomal protein S1-like RNA-binding domain
CRH11_RS07835	SM00732	Likely ribonuclease with RNase H fold.
CRH11_RS07845	SM00731	SprT homologues.
CRH11_RS07955	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS08000	SM00829	Enoylreductase
CRH11_RS08005	SM00829	Enoylreductase
CRH11_RS08020	SM00357	Cold shock protein domain
CRH11_RS08025	SM01058	CarD-like/TRCF domain
CRH11_RS08040	SM00450	Rhodanese Homology Domain
CRH11_RS08045	SM00450	Rhodanese Homology Domain
CRH11_RS08050	SM00450	Rhodanese Homology Domain
CRH11_RS08050	SM00849	Metallo-beta-lactamase superfamily
CRH11_RS08140	SM01130	CRH11_RS08140
CRH11_RS08165	SM00829	Enoylreductase
CRH11_RS08180	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS08210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS08245	SM00387	Histidine kinase-like ATPases
CRH11_RS08250	SM00421	helix_turn_helix, Lux Regulon
CRH11_RS08250	SM00448	cheY-homologous receiver domain
CRH11_RS08265	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS08290	SM00825	Beta-ketoacyl synthase
CRH11_RS08295	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS08310	SM00422	helix_turn_helix, mercury resistance
CRH11_RS08335	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS08335	SM00895	CRH11_RS08335
CRH11_RS08370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS08370	SM00866	CRH11_RS08370
CRH11_RS08375	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS08375	SM00895	CRH11_RS08375
CRH11_RS08415	SM00829	Enoylreductase
CRH11_RS08485	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS08495	SM00881	CoA binding domain
CRH11_RS08520	SM00883	Chaperonin 10 Kd subunit
CRH11_RS08540	SM00028	Tetratricopeptide repeats
CRH11_RS08540	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS08545	SM00829	Enoylreductase
CRH11_RS08600	SM00829	Enoylreductase
CRH11_RS08645	SM00460	Transglutaminase/protease-like homologues
CRH11_RS08690	SM01001	AIR carboxylase
CRH11_RS08700	SM00998	Adenylosuccinate lyase C-terminus
CRH11_RS08715	SM01211	CRH11_RS08715
CRH11_RS08740	SM00798	AICARFT/IMPCHase bienzyme
CRH11_RS08740	SM00851	MGS-like domain
CRH11_RS08745	SM01209	CRH11_RS08745
CRH11_RS08745	SM01210	CRH11_RS08745
CRH11_RS08790	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CRH11_RS08790	SM00292	breast cancer carboxy-terminal domain
CRH11_RS08790	SM00532	Ligase N family
CRH11_RS08825	SM00845	GatB domain
CRH11_RS08840	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CRH11_RS08855	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS08980	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS09000	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS09030	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS09125	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CRH11_RS09140	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS09145	SM00422	helix_turn_helix, mercury resistance
CRH11_RS09155	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS09160	SM00487	DEAD-like helicases superfamily
CRH11_RS09160	SM00490	helicase superfamily c-terminal domain
CRH11_RS09170	SM00829	Enoylreductase
CRH11_RS09185	SM00656	CRH11_RS09185
CRH11_RS09210	SM00387	Histidine kinase-like ATPases
CRH11_RS09210	SM00388	His Kinase A (phosphoacceptor) domain
CRH11_RS09210	SM00448	cheY-homologous receiver domain
CRH11_RS09215	SM00448	cheY-homologous receiver domain
CRH11_RS09215	SM00862	Transcriptional regulatory protein, C terminal
CRH11_RS09235	SM00091	PAS domain
CRH11_RS09235	SM00387	Histidine kinase-like ATPases
CRH11_RS09240	SM00448	cheY-homologous receiver domain
CRH11_RS09255	SM00849	Metallo-beta-lactamase superfamily
CRH11_RS09335	SM00642	Alpha-amylase domain
CRH11_RS09340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS09340	SM00866	CRH11_RS09340
CRH11_RS09370	SM00354	helix_turn _helix lactose operon repressor
CRH11_RS09395	SM00226	Low molecular weight phosphatase family
CRH11_RS09460	SM00478	endonuclease III
CRH11_RS09490	SM00861	Transketolase, pyrimidine binding domain
CRH11_RS09505	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS09535	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS09540	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS09600	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS09670	SM00287	Bacterial SH3 domain homologues
CRH11_RS09700	SM00478	endonuclease III
CRH11_RS09700	SM00525	CRH11_RS09700
CRH11_RS09730	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS09905	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS09910	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS09915	SM01060	CRH11_RS09915
CRH11_RS09925	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS09930	SM00062	Bacterial periplasmic substrate-binding proteins
CRH11_RS09955	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS09970	SM00567	E-Z type HEAT repeats
CRH11_RS10005	SM00763	PrkA AAA domain
CRH11_RS10020	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS10050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS10055	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS10060	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS10070	SM00357	Cold shock protein domain
CRH11_RS10085	SM00267	diguanylate cyclase
CRH11_RS10135	SM00116	Domain in cystathionine beta-synthase and other proteins.
CRH11_RS10180	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CRH11_RS10180	SM00387	Histidine kinase-like ATPases
CRH11_RS10185	SM00421	helix_turn_helix, Lux Regulon
CRH11_RS10185	SM00448	cheY-homologous receiver domain
CRH11_RS10205	SM00257	Lysin motif
CRH11_RS10230	SM00098	Alkaline phosphatase homologues
CRH11_RS10235	SM00257	Lysin motif
CRH11_RS10280	SM00563	Phosphate acyltransferases
CRH11_RS10285	SM01091	Transporter associated domain
CRH11_RS10290	SM00422	helix_turn_helix, mercury resistance
CRH11_RS10300	SM00825	Beta-ketoacyl synthase
CRH11_RS10305	SM01091	Transporter associated domain
CRH11_RS10365	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS10370	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS10430	SM00729	Elongator protein 3, MiaB family, Radical SAM
CRH11_RS10465	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS10485	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CRH11_RS10535	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS10565	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS10650	SM00849	Metallo-beta-lactamase superfamily
CRH11_RS10695	SM00855	Phosphoglycerate mutase family
CRH11_RS10715	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CRH11_RS10730	SM00914	CRH11_RS10730
CRH11_RS10760	SM00894	Excalibur calcium-binding domain
CRH11_RS10800	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS10925	SM00342	helix_turn_helix, arabinose operon control protein
CRH11_RS10940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS10965	SM00316	Ribosomal protein S1-like RNA-binding domain
CRH11_RS10975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CRH11_RS10975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH11_RS11040	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CRH11_RS11060	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CRH11_RS11065	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CRH11_RS11120	SM00825	Beta-ketoacyl synthase
CRH11_RS11130	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS11135	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS11180	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS11185	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS11245	SM01118	CRH11_RS11245
CRH11_RS11255	SM00954	Region found in RelA / SpoT proteins
CRH11_RS11385	SM00849	Metallo-beta-lactamase superfamily
CRH11_RS11395	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS11400	SM00966	SpoVT / AbrB like domain 
CRH11_RS11510	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS11550	SM00420	helix_turn_helix, Deoxyribose operon repressor
CRH11_RS11550	SM01134	CRH11_RS11550
CRH11_RS11565	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS11600	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CRH11_RS11600	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CRH11_RS11635	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS11670	SM00354	helix_turn _helix lactose operon repressor
CRH11_RS11680	SM00858	CRH11_RS11680
CRH11_RS11695	SM00028	Tetratricopeptide repeats
CRH11_RS11705	SM00257	Lysin motif
CRH11_RS11705	SM00644	CRH11_RS11705
CRH11_RS11725	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS11740	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS11840	SM00257	Lysin motif
CRH11_RS11905	SM00257	Lysin motif
CRH11_RS11905	SM00644	CRH11_RS11905
CRH11_RS11950	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CRH11_RS11975	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS11990	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CRH11_RS12000	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS12040	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CRH11_RS12055	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS12075	SM00028	Tetratricopeptide repeats
CRH11_RS12090	SM00100	Cyclic nucleotide-monophosphate binding domain
CRH11_RS12115	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS12125	SM00257	Lysin motif
CRH11_RS12125	SM00636	CRH11_RS12125
CRH11_RS12140	SM00116	Domain in cystathionine beta-synthase and other proteins.
CRH11_RS12140	SM00924	MgtE intracellular N domain
CRH11_RS12145	SM00422	helix_turn_helix, mercury resistance
CRH11_RS12160	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS12175	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
CRH11_RS12235	SM00091	PAS domain
CRH11_RS12235	SM00387	Histidine kinase-like ATPases
CRH11_RS12235	SM00388	His Kinase A (phosphoacceptor) domain
CRH11_RS12275	SM01007	Class II Aldolase and Adducin N-terminal domain
CRH11_RS12290	SM00387	Histidine kinase-like ATPases
CRH11_RS12290	SM00388	His Kinase A (phosphoacceptor) domain
CRH11_RS12295	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS12310	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS12310	SM01086	C-terminal, D2-small domain, of ClpB protein
CRH11_RS12355	SM00822	CRH11_RS12355
CRH11_RS12365	SM00257	Lysin motif
CRH11_RS12370	SM00257	Lysin motif
CRH11_RS12375	SM00636	CRH11_RS12375
CRH11_RS12425	SM00354	helix_turn _helix lactose operon repressor
CRH11_RS12430	SM01061	CAT RNA binding domain
CRH11_RS12460	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CRH11_RS12460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH11_RS12480	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CRH11_RS12480	SM00091	PAS domain
CRH11_RS12480	SM00387	Histidine kinase-like ATPases
CRH11_RS12480	SM00388	His Kinase A (phosphoacceptor) domain
CRH11_RS12500	SM00260	Two component signalling adaptor domain
CRH11_RS12500	SM00448	cheY-homologous receiver domain
CRH11_RS12515	SM00257	Lysin motif
CRH11_RS12535	SM00052	Putative diguanylate phosphodiesterase
CRH11_RS12625	SM00852	Probable molybdopterin binding domain
CRH11_RS12655	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS12665	SM00420	helix_turn_helix, Deoxyribose operon repressor
CRH11_RS12665	SM01134	CRH11_RS12665
CRH11_RS12690	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS12720	SM00966	SpoVT / AbrB like domain 
CRH11_RS12725	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CRH11_RS12725	SM00091	PAS domain
CRH11_RS12725	SM00387	Histidine kinase-like ATPases
CRH11_RS12725	SM00388	His Kinase A (phosphoacceptor) domain
CRH11_RS12745	SM00849	Metallo-beta-lactamase superfamily
CRH11_RS12780	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH11_RS12785	SM00822	CRH11_RS12785
CRH11_RS12785	SM00823	Phosphopantetheine attachment site
CRH11_RS12785	SM00825	Beta-ketoacyl synthase
CRH11_RS12785	SM00826	CRH11_RS12785
CRH11_RS12785	SM01294	CRH11_RS12785
CRH11_RS12790	SM00822	CRH11_RS12790
CRH11_RS12790	SM00823	Phosphopantetheine attachment site
CRH11_RS12790	SM00825	Beta-ketoacyl synthase
CRH11_RS12790	SM00826	CRH11_RS12790
CRH11_RS12795	SM00822	CRH11_RS12795
CRH11_RS12795	SM00823	Phosphopantetheine attachment site
CRH11_RS12795	SM00825	Beta-ketoacyl synthase
CRH11_RS12795	SM01294	CRH11_RS12795
CRH11_RS12800	SM00822	CRH11_RS12800
CRH11_RS12800	SM00823	Phosphopantetheine attachment site
CRH11_RS12800	SM00825	Beta-ketoacyl synthase
CRH11_RS12800	SM01294	CRH11_RS12800
CRH11_RS12805	SM00822	CRH11_RS12805
CRH11_RS12805	SM00823	Phosphopantetheine attachment site
CRH11_RS12805	SM00825	Beta-ketoacyl synthase
CRH11_RS12805	SM01294	CRH11_RS12805
CRH11_RS12810	SM00822	CRH11_RS12810
CRH11_RS12810	SM00823	Phosphopantetheine attachment site
CRH11_RS12810	SM00825	Beta-ketoacyl synthase
CRH11_RS12810	SM01294	CRH11_RS12810
CRH11_RS12815	SM00822	CRH11_RS12815
CRH11_RS12815	SM00823	Phosphopantetheine attachment site
CRH11_RS12815	SM01294	CRH11_RS12815
CRH11_RS12830	SM00861	Transketolase, pyrimidine binding domain
CRH11_RS12920	SM00838	Elongation factor G C-terminus
CRH11_RS12940	SM00670	Large family of predicted nucleotide-binding domains
CRH11_RS12965	SM00878	Biotin carboxylase C-terminal domain
CRH11_RS13010	SM00116	Domain in cystathionine beta-synthase and other proteins.
CRH11_RS13115	SM00740	CRH11_RS13115
CRH11_RS13120	SM00740	CRH11_RS13120
CRH11_RS13160	SM00842	Cell division protein FtsA
CRH11_RS13165	SM00864	Tubulin/FtsZ family, GTPase domain
CRH11_RS13165	SM00865	Tubulin/FtsZ family, C-terminal domain
CRH11_RS13190	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS13225	SM00363	S4 RNA-binding domain
CRH11_RS13255	SM00363	S4 RNA-binding domain
CRH11_RS13280	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CRH11_RS13285	SM00851	MGS-like domain
CRH11_RS13285	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CRH11_RS13285	SM01209	CRH11_RS13285
CRH11_RS13300	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CRH11_RS13360	SM00831	Cation transporter/ATPase, N-terminus
CRH11_RS13375	SM00072	Guanylate kinase homologues.
CRH11_RS13380	SM01409	CRH11_RS13380
CRH11_RS13390	SM00487	DEAD-like helicases superfamily
CRH11_RS13390	SM00490	helicase superfamily c-terminal domain
CRH11_RS13415	SM00331	Sigma factor PP2C-like phosphatases
CRH11_RS13415	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CRH11_RS13420	SM00220	Serine/Threonine protein kinases, catalytic domain
CRH11_RS13420	SM00740	CRH11_RS13420
CRH11_RS13435	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
CRH11_RS13455	SM01120	CRH11_RS13455
CRH11_RS13455	SM01121	CRH11_RS13455
CRH11_RS13470	SM00487	DEAD-like helicases superfamily
CRH11_RS13470	SM00490	helicase superfamily c-terminal domain
CRH11_RS13485	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH11_RS13490	SM00822	CRH11_RS13490
CRH11_RS13500	SM00358	Double-stranded RNA binding motif
CRH11_RS13500	SM00535	Ribonuclease III family
CRH11_RS13505	SM00968	SMC proteins Flexible Hinge Domain
CRH11_RS13510	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS13510	SM00962	SRP54-type protein, GTPase domain
CRH11_RS13510	SM00963	SRP54-type protein, helical bundle domain
CRH11_RS13525	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS13525	SM00962	SRP54-type protein, GTPase domain
CRH11_RS13525	SM00963	SRP54-type protein, helical bundle domain
CRH11_RS13585	SM00881	CoA binding domain
CRH11_RS13595	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CRH11_RS13595	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CRH11_RS13595	SM00493	CRH11_RS13595
CRH11_RS13615	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS13615	SM01086	C-terminal, D2-small domain, of ClpB protein
CRH11_RS13655	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS13705	SM00448	cheY-homologous receiver domain
CRH11_RS13740	SM00962	SRP54-type protein, GTPase domain
CRH11_RS13750	SM00448	cheY-homologous receiver domain
CRH11_RS13755	SM00073	Histidine Phosphotransfer domain
CRH11_RS13755	SM00260	Two component signalling adaptor domain
CRH11_RS13755	SM00387	Histidine kinase-like ATPases
CRH11_RS13755	SM01231	CRH11_RS13755
CRH11_RS13760	SM00260	Two component signalling adaptor domain
CRH11_RS13820	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CRH11_RS13830	SM00479	CRH11_RS13830
CRH11_RS13830	SM00481	DNA polymerase alpha chain like domain
CRH11_RS13840	SM00316	Ribosomal protein S1-like RNA-binding domain
CRH11_RS13840	SM00322	K homology RNA-binding domain
CRH11_RS13875	SM00904	Riboflavin kinase
CRH11_RS13880	SM01387	CRH11_RS13880
CRH11_RS13885	SM00316	Ribosomal protein S1-like RNA-binding domain
CRH11_RS13885	SM00322	K homology RNA-binding domain
CRH11_RS13915	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CRH11_RS13925	SM01130	CRH11_RS13925
CRH11_RS13930	SM00849	Metallo-beta-lactamase superfamily
CRH11_RS13945	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS13945	SM00843	CRH11_RS13945
CRH11_RS13950	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS13950	SM00866	CRH11_RS13950
CRH11_RS13960	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS13995	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS14005	SM00852	Probable molybdopterin binding domain
CRH11_RS14010	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS14020	SM00322	K homology RNA-binding domain
CRH11_RS14020	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CRH11_RS14035	SM00829	Enoylreductase
CRH11_RS14045	SM00729	Elongator protein 3, MiaB family, Radical SAM
CRH11_RS14060	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CRH11_RS14060	SM00534	ATPase domain of DNA mismatch repair MUTS family
CRH11_RS14065	SM00853	MutL C terminal dimerisation domain
CRH11_RS14065	SM01340	CRH11_RS14065
CRH11_RS14080	SM00849	Metallo-beta-lactamase superfamily
CRH11_RS14085	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH11_RS14090	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH11_RS14095	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH11_RS14120	SM00822	CRH11_RS14120
CRH11_RS14120	SM00823	Phosphopantetheine attachment site
CRH11_RS14120	SM00825	Beta-ketoacyl synthase
CRH11_RS14120	SM00826	CRH11_RS14120
CRH11_RS14120	SM01294	CRH11_RS14120
CRH11_RS14125	SM00822	CRH11_RS14125
CRH11_RS14125	SM00823	Phosphopantetheine attachment site
CRH11_RS14125	SM00825	Beta-ketoacyl synthase
CRH11_RS14125	SM00826	CRH11_RS14125
CRH11_RS14125	SM01294	CRH11_RS14125
CRH11_RS14130	SM00822	CRH11_RS14130
CRH11_RS14130	SM00823	Phosphopantetheine attachment site
CRH11_RS14130	SM00825	Beta-ketoacyl synthase
CRH11_RS14130	SM00826	CRH11_RS14130
CRH11_RS14130	SM01294	CRH11_RS14130
CRH11_RS14135	SM00822	CRH11_RS14135
CRH11_RS14135	SM00823	Phosphopantetheine attachment site
CRH11_RS14135	SM00825	Beta-ketoacyl synthase
CRH11_RS14135	SM00826	CRH11_RS14135
CRH11_RS14135	SM01294	CRH11_RS14135
CRH11_RS14140	SM00823	Phosphopantetheine attachment site
CRH11_RS14140	SM00825	Beta-ketoacyl synthase
CRH11_RS14140	SM01294	CRH11_RS14140
CRH11_RS14245	SM00646	CRH11_RS14245
CRH11_RS14255	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS14270	SM00422	helix_turn_helix, mercury resistance
CRH11_RS14275	SM01230	CRH11_RS14275
CRH11_RS14340	SM00829	Enoylreductase
CRH11_RS14425	SM00710	Parallel beta-helix repeats
CRH11_RS14465	SM00257	Lysin motif
CRH11_RS14470	SM00857	Resolvase, N terminal domain
CRH11_RS14480	SM00861	Transketolase, pyrimidine binding domain
CRH11_RS14505	SM00448	cheY-homologous receiver domain
CRH11_RS14575	SM01207	CRH11_RS14575
CRH11_RS14580	SM00881	CoA binding domain
CRH11_RS14585	SM00387	Histidine kinase-like ATPases
CRH11_RS14585	SM00433	TopoisomeraseII
CRH11_RS14590	SM00434	DNA Topoisomerase IV
CRH11_RS14610	SM00829	Enoylreductase
CRH11_RS14630	SM00354	helix_turn _helix lactose operon repressor
CRH11_RS14660	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS14680	SM01067	Cellulose binding domain
CRH11_RS14690	SM00387	Histidine kinase-like ATPases
CRH11_RS14690	SM00388	His Kinase A (phosphoacceptor) domain
CRH11_RS14695	SM00448	cheY-homologous receiver domain
CRH11_RS14695	SM00862	Transcriptional regulatory protein, C terminal
CRH11_RS14705	SM00606	Cellulose Binding Domain Type IV
CRH11_RS14710	SM00823	Phosphopantetheine attachment site
CRH11_RS14710	SM00824	Thioesterase
CRH11_RS14715	SM00823	Phosphopantetheine attachment site
CRH11_RS14720	SM00823	Phosphopantetheine attachment site
CRH11_RS14720	SM00825	Beta-ketoacyl synthase
CRH11_RS14725	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH11_RS14730	SM00822	CRH11_RS14730
CRH11_RS14735	SM00882	Coenzyme A transferase
CRH11_RS14740	SM00882	Coenzyme A transferase
CRH11_RS14755	SM00729	Elongator protein 3, MiaB family, Radical SAM
CRH11_RS14755	SM00876	Biotin and Thiamin Synthesis associated domain
CRH11_RS14815	SM00878	Biotin carboxylase C-terminal domain
CRH11_RS14840	SM00824	Thioesterase
CRH11_RS14845	SM00823	Phosphopantetheine attachment site
CRH11_RS14850	SM00823	Phosphopantetheine attachment site
CRH11_RS14855	SM00823	Phosphopantetheine attachment site
CRH11_RS14855	SM01294	CRH11_RS14855
CRH11_RS14860	SM00823	Phosphopantetheine attachment site
CRH11_RS14895	SM00860	SMI1 / KNR4 family
CRH11_RS14905	SM00644	CRH11_RS14905
CRH11_RS14930	SM00710	Parallel beta-helix repeats
CRH11_RS14935	SM00047	Lysozyme subfamily 2
CRH11_RS15025	SM00507	HNH nucleases
CRH11_RS15115	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS15120	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS15165	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH11_RS15205	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CRH11_RS15220	SM00822	CRH11_RS15220
CRH11_RS15265	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS15275	SM00860	SMI1 / KNR4 family
CRH11_RS15290	SM00342	helix_turn_helix, arabinose operon control protein
CRH11_RS15300	SM00849	Metallo-beta-lactamase superfamily
CRH11_RS15310	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH11_RS15345	SM00257	Lysin motif
CRH11_RS15350	SM00341	Helicase and RNase D C-terminal
CRH11_RS15350	SM00487	DEAD-like helicases superfamily
CRH11_RS15350	SM00490	helicase superfamily c-terminal domain
CRH11_RS15350	SM00956	CRH11_RS15350
CRH11_RS15435	SM00849	Metallo-beta-lactamase superfamily
CRH11_RS15445	SM00861	Transketolase, pyrimidine binding domain
CRH11_RS15450	SM00327	von Willebrand factor (vWF) type A domain
CRH11_RS15455	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS15465	SM00257	Lysin motif
CRH11_RS15570	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS15570	SM00866	CRH11_RS15570
CRH11_RS15575	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CRH11_RS15575	SM00245	tail specific protease
CRH11_RS15610	SM00014	Acid phosphatase homologues
CRH11_RS15660	SM00882	Coenzyme A transferase
CRH11_RS15665	SM00882	Coenzyme A transferase
CRH11_RS15675	SM00871	Bacterial transcription activator, effector binding domain
CRH11_RS15750	SM00028	Tetratricopeptide repeats
CRH11_RS15775	SM00860	SMI1 / KNR4 family
CRH11_RS15785	SM00860	SMI1 / KNR4 family
CRH11_RS15790	SM00318	Staphylococcal nuclease homologues
CRH11_RS15790	SM00894	Excalibur calcium-binding domain
CRH11_RS15795	SM00857	Resolvase, N terminal domain
CRH11_RS15815	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS15890	SM00567	E-Z type HEAT repeats
CRH11_RS15890	SM00932	Scaffold protein Nfu/NifU N terminal
CRH11_RS15895	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CRH11_RS15915	SM00357	Cold shock protein domain
CRH11_RS15955	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CRH11_RS15955	SM00475	5'-3' exonuclease
CRH11_RS16035	SM00491	CRH11_RS16035
CRH11_RS16050	SM00981	CRH11_RS16050
CRH11_RS16080	SM00487	DEAD-like helicases superfamily
CRH11_RS16080	SM00490	helicase superfamily c-terminal domain
CRH11_RS16130	SM00060	Fibronectin type 3 domain
CRH11_RS16140	SM00478	endonuclease III
CRH11_RS16140	SM00525	CRH11_RS16140
CRH11_RS16170	SM00479	CRH11_RS16170
CRH11_RS16170	SM00487	DEAD-like helicases superfamily
CRH11_RS16170	SM00491	CRH11_RS16170
CRH11_RS16210	SM00851	MGS-like domain
CRH11_RS16230	SM00835	Cupin
CRH11_RS16265	SM00914	CRH11_RS16265
CRH11_RS16270	SM00028	Tetratricopeptide repeats
CRH11_RS16340	SM00138	Methyltransferase, chemotaxis proteins 
CRH11_RS16345	SM00562	CRH11_RS16345
CRH11_RS16375	SM00411	bacterial (prokaryotic) histone like domain
CRH11_RS16420	SM00316	Ribosomal protein S1-like RNA-binding domain
CRH11_RS16460	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CRH11_RS16480	SM00257	Lysin motif
CRH11_RS16490	SM00487	DEAD-like helicases superfamily
CRH11_RS16490	SM00490	helicase superfamily c-terminal domain
CRH11_RS16525	SM00091	PAS domain
CRH11_RS16525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CRH11_RS16525	SM00387	Histidine kinase-like ATPases
CRH11_RS16525	SM00388	His Kinase A (phosphoacceptor) domain
CRH11_RS16530	SM00448	cheY-homologous receiver domain
CRH11_RS16530	SM00862	Transcriptional regulatory protein, C terminal
CRH11_RS16550	SM00363	S4 RNA-binding domain
CRH11_RS16695	SM00387	Histidine kinase-like ATPases
CRH11_RS16705	SM00936	Penicillin-binding protein 5, C-terminal domain 
CRH11_RS16750	SM00919	Malic enzyme, NAD binding domain
CRH11_RS16750	SM01274	CRH11_RS16750
CRH11_RS16765	SM00870	CRH11_RS16765
CRH11_RS16770	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS16875	SM00849	Metallo-beta-lactamase superfamily
CRH11_RS16900	SM00823	Phosphopantetheine attachment site
CRH11_RS16900	SM00825	Beta-ketoacyl synthase
CRH11_RS16900	SM00829	Enoylreductase
CRH11_RS16900	SM01294	CRH11_RS16900
CRH11_RS16905	SM00822	CRH11_RS16905
CRH11_RS16905	SM00823	Phosphopantetheine attachment site
CRH11_RS16905	SM00825	Beta-ketoacyl synthase
CRH11_RS16905	SM00826	CRH11_RS16905
CRH11_RS16910	SM00822	CRH11_RS16910
CRH11_RS16910	SM00823	Phosphopantetheine attachment site
CRH11_RS16910	SM00825	Beta-ketoacyl synthase
CRH11_RS16910	SM01294	CRH11_RS16910
CRH11_RS16915	SM00822	CRH11_RS16915
CRH11_RS16915	SM00823	Phosphopantetheine attachment site
CRH11_RS16915	SM00825	Beta-ketoacyl synthase
CRH11_RS16915	SM00826	CRH11_RS16915
CRH11_RS16915	SM01294	CRH11_RS16915
CRH11_RS16920	SM00822	CRH11_RS16920
CRH11_RS16920	SM00823	Phosphopantetheine attachment site
CRH11_RS16920	SM00825	Beta-ketoacyl synthase
CRH11_RS16920	SM00826	CRH11_RS16920
CRH11_RS16920	SM01294	CRH11_RS16920
CRH11_RS16925	SM00822	CRH11_RS16925
CRH11_RS16925	SM00823	Phosphopantetheine attachment site
CRH11_RS16925	SM00825	Beta-ketoacyl synthase
CRH11_RS16925	SM01294	CRH11_RS16925
CRH11_RS16930	SM00822	CRH11_RS16930
CRH11_RS16930	SM00823	Phosphopantetheine attachment site
CRH11_RS16930	SM00825	Beta-ketoacyl synthase
CRH11_RS16930	SM00826	CRH11_RS16930
CRH11_RS16930	SM01294	CRH11_RS16930
CRH11_RS16955	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CRH11_RS16965	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CRH11_RS17000	SM00849	Metallo-beta-lactamase superfamily
CRH11_RS17010	SM01350	CRH11_RS17010
CRH11_RS17055	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS17065	SM00062	Bacterial periplasmic substrate-binding proteins
CRH11_RS17065	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CRH11_RS17075	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CRH11_RS17085	SM00861	Transketolase, pyrimidine binding domain
CRH11_RS17105	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CRH11_RS17115	SM00091	PAS domain
CRH11_RS17115	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS17160	SM00646	CRH11_RS17160
CRH11_RS17175	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS17195	SM01005	Alanine racemase, C-terminal domain
CRH11_RS17200	SM00448	cheY-homologous receiver domain
CRH11_RS17205	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CRH11_RS17220	SM00363	S4 RNA-binding domain
CRH11_RS17225	SM00861	Transketolase, pyrimidine binding domain
CRH11_RS17260	SM00878	Biotin carboxylase C-terminal domain
CRH11_RS17305	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS17315	SM00841	Elongation factor P, C-terminal
CRH11_RS17315	SM01185	CRH11_RS17315
CRH11_RS17345	SM00529	Helix-turn-helix diphteria tox regulatory element
CRH11_RS17355	SM00450	Rhodanese Homology Domain
CRH11_RS17375	SM00487	DEAD-like helicases superfamily
CRH11_RS17375	SM00490	helicase superfamily c-terminal domain
CRH11_RS17390	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS17450	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS17460	SM01091	Transporter associated domain
CRH11_RS17485	SM00849	Metallo-beta-lactamase superfamily
CRH11_RS17505	SM00631	CRH11_RS17505
CRH11_RS17550	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS17555	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS17600	SM00257	Lysin motif
CRH11_RS17635	SM00518	AP endonuclease family 2
CRH11_RS17640	SM00487	DEAD-like helicases superfamily
CRH11_RS17640	SM00490	helicase superfamily c-terminal domain
CRH11_RS17675	SM00400	zinc finger
CRH11_RS17675	SM00493	CRH11_RS17675
CRH11_RS17690	SM00116	Domain in cystathionine beta-synthase and other proteins.
CRH11_RS17735	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CRH11_RS17785	SM00729	Elongator protein 3, MiaB family, Radical SAM
CRH11_RS17800	SM00271	DnaJ molecular chaperone homology domain
CRH11_RS17820	SM00729	Elongator protein 3, MiaB family, Radical SAM
CRH11_RS17825	SM00838	Elongation factor G C-terminus
CRH11_RS17860	SM00849	Metallo-beta-lactamase superfamily
CRH11_RS17870	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CRH11_RS17890	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CRH11_RS17900	SM01103	CRH11_RS17900
CRH11_RS17980	SM00388	His Kinase A (phosphoacceptor) domain
CRH11_RS17985	SM00448	cheY-homologous receiver domain
CRH11_RS17985	SM00862	Transcriptional regulatory protein, C terminal
CRH11_RS18060	SM00849	Metallo-beta-lactamase superfamily
CRH11_RS18115	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CRH11_RS18115	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CRH11_RS18200	SM00732	Likely ribonuclease with RNase H fold.
CRH11_RS18210	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CRH11_RS18220	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS18225	SM00062	Bacterial periplasmic substrate-binding proteins
CRH11_RS18225	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CRH11_RS18255	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS18260	SM00028	Tetratricopeptide repeats
CRH11_RS18280	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS18310	SM00287	Bacterial SH3 domain homologues
CRH11_RS18310	SM00646	CRH11_RS18310
CRH11_RS18320	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CRH11_RS18320	SM00954	Region found in RelA / SpoT proteins
CRH11_RS18370	SM01323	CRH11_RS18370
CRH11_RS18390	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS18395	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CRH11_RS18415	SM00257	Lysin motif
CRH11_RS18460	SM01317	CRH11_RS18460
CRH11_RS18555	SM00257	Lysin motif
CRH11_RS18565	SM01004	Delta-aminolevulinic acid dehydratase
CRH11_RS18600	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS18600	SM00464	Found in ATP-dependent protease La (LON)
CRH11_RS18605	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS18610	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS18610	SM00994	ClpX C4-type zinc finger
CRH11_RS18610	SM01086	C-terminal, D2-small domain, of ClpB protein
CRH11_RS18635	SM01329	CRH11_RS18635
CRH11_RS18640	SM00917	LeuA allosteric (dimerisation) domain
CRH11_RS18695	SM00487	DEAD-like helicases superfamily
CRH11_RS18695	SM00490	helicase superfamily c-terminal domain
CRH11_RS18730	SM00909	Sporulation and spore germination
CRH11_RS18740	SM00347	helix_turn_helix multiple antibiotic resistance protein
CRH11_RS18745	SM00421	helix_turn_helix, Lux Regulon
CRH11_RS18785	SM00465	GIY-YIG type nucleases (URI domain)
CRH11_RS18795	SM00813	Alpha-L-arabinofuranosidase C-terminus
CRH11_RS18800	SM00893	Electron transfer flavoprotein domain
CRH11_RS18805	SM00893	Electron transfer flavoprotein domain
CRH11_RS18840	SM00463	Small MutS-related domain
CRH11_RS18840	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CRH11_RS18840	SM00534	ATPase domain of DNA mismatch repair MUTS family
CRH11_RS18845	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CRH11_RS18845	SM00481	DNA polymerase alpha chain like domain
CRH11_RS18845	SM00483	DNA polymerase X family
CRH11_RS18865	SM00873	B3/4 domain
CRH11_RS18865	SM00874	tRNA synthetase B5 domain
CRH11_RS18865	SM00896	Ferredoxin-fold anticodon binding domain
CRH11_RS18875	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CRH11_RS18905	SM00813	Alpha-L-arabinofuranosidase C-terminus
CRH11_RS18935	SM01007	Class II Aldolase and Adducin N-terminal domain
CRH11_RS18995	SM00448	cheY-homologous receiver domain
CRH11_RS18995	SM00850	LytTr DNA-binding domain
CRH11_RS19000	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CRH11_RS19000	SM00387	Histidine kinase-like ATPases
CRH11_RS19010	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CRH11_RS19025	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS19045	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CRH11_RS19075	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CRH11_RS19075	SM01232	CRH11_RS19075
CRH11_RS19080	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CRH11_RS19080	SM00474	3'-5' exonuclease
CRH11_RS19080	SM00475	5'-3' exonuclease
CRH11_RS19080	SM00482	DNA polymerase A domain
CRH11_RS19085	SM00091	PAS domain
CRH11_RS19085	SM00387	Histidine kinase-like ATPases
CRH11_RS19085	SM00388	His Kinase A (phosphoacceptor) domain
CRH11_RS19090	SM00448	cheY-homologous receiver domain
CRH11_RS19090	SM00862	Transcriptional regulatory protein, C terminal
CRH11_RS19100	SM01329	CRH11_RS19100
CRH11_RS19170	SM00919	Malic enzyme, NAD binding domain
CRH11_RS19170	SM01274	CRH11_RS19170
CRH11_RS19175	SM00481	DNA polymerase alpha chain like domain
CRH11_RS19205	SM00116	Domain in cystathionine beta-synthase and other proteins.
CRH11_RS19210	SM00849	Metallo-beta-lactamase superfamily
CRH11_RS19235	SM00852	Probable molybdopterin binding domain
CRH11_RS19295	SM00981	CRH11_RS19295
CRH11_RS19330	SM00267	diguanylate cyclase
CRH11_RS19340	SM00363	S4 RNA-binding domain
CRH11_RS19340	SM01390	CRH11_RS19340
CRH11_RS19425	SM00363	S4 RNA-binding domain
CRH11_RS19440	SM00116	Domain in cystathionine beta-synthase and other proteins.
CRH11_RS19460	SM00354	helix_turn _helix lactose operon repressor
CRH11_RS19465	SM00830	Chorismate mutase type II
CRH11_RS19490	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS19490	SM00843	CRH11_RS19490
CRH11_RS19525	SM00919	Malic enzyme, NAD binding domain
CRH11_RS19525	SM01274	CRH11_RS19525
CRH11_RS19530	SM00849	Metallo-beta-lactamase superfamily
CRH11_RS19550	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CRH11_RS19585	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS19590	SM00420	helix_turn_helix, Deoxyribose operon repressor
CRH11_RS19595	SM00363	S4 RNA-binding domain
CRH11_RS19620	SM00354	helix_turn _helix lactose operon repressor
CRH11_RS19650	SM00450	Rhodanese Homology Domain
CRH11_RS19665	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CRH11_RS19665	SM00091	PAS domain
CRH11_RS19685	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS19690	SM00387	Histidine kinase-like ATPases
CRH11_RS19695	SM00448	cheY-homologous receiver domain
CRH11_RS19695	SM00862	Transcriptional regulatory protein, C terminal
CRH11_RS19705	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS19725	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS19730	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CRH11_RS19740	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CRH11_RS19750	SM00729	Elongator protein 3, MiaB family, Radical SAM
CRH11_RS19820	SM00382	ATPases associated with a variety of cellular activities
CRH11_RS19860	SM01234	CRH11_RS19860
CRH11_RS19865	SM00947	Carbonic anhydrase
CRH11_RS19895	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CRH11_RS20060	SM00244	prohibitin homologues
CRH11_RS20110	SM00047	Lysozyme subfamily 2
CRH11_RS20120	SM00835	Cupin
CRH11_RS20135	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS20155	SM00257	Lysin motif
CRH11_RS20155	SM00644	CRH11_RS20155
CRH11_RS20180	SM00710	Parallel beta-helix repeats
CRH11_RS20190	SM00047	Lysozyme subfamily 2
CRH11_RS20310	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS20320	SM00710	Parallel beta-helix repeats
CRH11_RS20395	SM00380	DNA-binding domain in plant proteins such as APETALA2 and EREBPs
CRH11_RS20460	SM00474	3'-5' exonuclease
CRH11_RS20460	SM00482	DNA polymerase A domain
CRH11_RS20505	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS20590	SM00530	Helix-turn-helix XRE-family like proteins 
CRH11_RS20610	SM00257	Lysin motif
CRH11_RS20610	SM00644	CRH11_RS20610
