locus-tag	class	description
BBJ33_RS00005	PF11638	DnaA N-terminal domain
BBJ33_RS00005	PF08299	Bacterial dnaA protein helix-turn-helix
BBJ33_RS00005	PF00308	Bacterial dnaA  protein
BBJ33_RS00010	PF00712	DNA polymerase III beta subunit, N-terminal domain
BBJ33_RS00010	PF02768	DNA polymerase III beta subunit, C-terminal domain
BBJ33_RS00010	PF02767	DNA polymerase III beta subunit, central domain
BBJ33_RS00020	PF02463	RecF/RecN/SMC N terminal domain
BBJ33_RS00025	PF04025	Domain of unknown function (DUF370)
BBJ33_RS00030	PF01751	Toprim domain
BBJ33_RS00030	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS00030	PF00986	DNA gyrase B subunit, carboxyl terminus
BBJ33_RS00030	PF00204	DNA gyrase B
BBJ33_RS00035	PF00521	DNA gyrase/topoisomerase IV, subunit A
BBJ33_RS00035	PF03989	DNA gyrase C-terminal domain, beta-propeller
BBJ33_RS00065	PF14175	YaaC-like Protein
BBJ33_RS00070	PF00478	IMP dehydrogenase / GMP reductase domain
BBJ33_RS00070	PF00571	CBS domain
BBJ33_RS00075	PF07943	Penicillin-binding protein 5, C-terminal domain
BBJ33_RS00075	PF00768	D-alanyl-D-alanine carboxypeptidase
BBJ33_RS00080	PF01680	SOR/SNZ family
BBJ33_RS00085	PF01174	SNO glutamine amidotransferase family
BBJ33_RS00090	PF02403	Seryl-tRNA synthetase N-terminal domain
BBJ33_RS00090	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BBJ33_RS00095	PF02595	Glycerate kinase family
BBJ33_RS00105	PF01712	Deoxynucleoside kinase
BBJ33_RS00110	PF01712	Deoxynucleoside kinase
BBJ33_RS00115	PF00704	Glycosyl hydrolases family 18
BBJ33_RS00115	PF01476	LysM domain
BBJ33_RS00120	PF00857	Isochorismatase family
BBJ33_RS00125	PF14437	MafB19-like deaminase
BBJ33_RS00135	PF12169	DNA polymerase III subunits gamma and tau domain III
BBJ33_RS00140	PF02575	YbaB/EbfC DNA-binding family
BBJ33_RS00145	PF13662	Toprim domain
BBJ33_RS00145	PF02132	RecR protein
BBJ33_RS00150	PF10704	Protein of unknown function (DUF2508)
BBJ33_RS00155	PF07441	SigmaK-factor processing regulatory protein BofA
BBJ33_RS00185	PF10764	Inhibitor of sigma-G Gin
BBJ33_RS00190	PF10112	5-bromo-4-chloroindolyl phosphate hydrolysis protein
BBJ33_RS00195	PF05816	Toxic anion resistance protein (TelA)
BBJ33_RS00200	PF01276	Orn/Lys/Arg decarboxylase, major domain
BBJ33_RS00200	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
BBJ33_RS00205	PF02223	Thymidylate kinase
BBJ33_RS00210	PF06153	Cyclic-di-AMP receptor
BBJ33_RS00215	PF03885	Protein of unknown function (DUF327)
BBJ33_RS00220	PF09115	DNA polymerase III, delta subunit, C terminal
BBJ33_RS00225	PF04468	PSP1 C-terminal conserved region
BBJ33_RS00230	PF06156	Initiation control protein YabA
BBJ33_RS00235	PF05175	Methyltransferase small domain
BBJ33_RS00240	PF01541	GIY-YIG catalytic domain
BBJ33_RS00245	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BBJ33_RS00250	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
BBJ33_RS00250	PF18277	AbrB C-terminal domain
BBJ33_RS00255	PF08264	Anticodon-binding domain of tRNA
BBJ33_RS00255	PF09334	tRNA synthetases class I (M)
BBJ33_RS00255	PF01588	Putative tRNA binding domain
BBJ33_RS00260	PF01026	TatD related DNase
BBJ33_RS00265	PF06725	3D domain
BBJ33_RS00265	PF03990	G5-linked-Ubiquitin-like domain
BBJ33_RS00265	PF07501	G5 domain
BBJ33_RS00270	PF13662	Toprim domain
BBJ33_RS00270	PF13331	Domain of unknown function (DUF4093)
BBJ33_RS00275	PF00398	Ribosomal RNA adenine dimethylase
BBJ33_RS00280	PF05582	YabG peptidase U57
BBJ33_RS00285	PF06257	Biofilm formation stimulator VEG
BBJ33_RS00290	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BBJ33_RS00295	PF00288	GHMP kinases N terminal domain
BBJ33_RS00295	PF08544	GHMP kinases C terminal 
BBJ33_RS00300	PF09182	Bacterial purine repressor, N-terminal
BBJ33_RS00300	PF00156	Phosphoribosyl transferase domain
BBJ33_RS00305	PF01042	Endoribonuclease L-PSP
BBJ33_RS00310	PF04026	SpoVG
BBJ33_RS00315	PF00483	Nucleotidyl transferase
BBJ33_RS00315	PF00132	Bacterial transferase hexapeptide (six repeats)
BBJ33_RS00320	PF14572	Phosphoribosyl synthetase-associated domain
BBJ33_RS00320	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
BBJ33_RS00325	PF14693	Ribosomal protein TL5, C-terminal domain
BBJ33_RS00325	PF01386	Ribosomal L25p family
BBJ33_RS00330	PF01195	Peptidyl-tRNA hydrolase
BBJ33_RS00335	PF10955	Protein of unknown function (DUF2757)
BBJ33_RS00340	PF02559	CarD-like/TRCF domain
BBJ33_RS00340	PF00270	DEAD/DEAH box helicase
BBJ33_RS00340	PF00271	Helicase conserved C-terminal domain
BBJ33_RS00340	PF03461	TRCF domain
BBJ33_RS00340	PF17757	UvrB interaction domain
BBJ33_RS00345	PF15714	Stage V sporulation protein T C-terminal, transcription factor
BBJ33_RS00345	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
BBJ33_RS00350	PF01943	Polysaccharide biosynthesis protein
BBJ33_RS00350	PF14667	Polysaccharide biosynthesis C-terminal domain
BBJ33_RS00355	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BBJ33_RS00355	PF03819	MazG nucleotide pyrophosphohydrolase domain
BBJ33_RS00360	PF01479	S4 domain
BBJ33_RS00365	PF07873	YabP family
BBJ33_RS00370	PF09578	Spore cortex protein YabQ (Spore_YabQ)
BBJ33_RS00375	PF04977	Septum formation initiator
BBJ33_RS00380	PF00575	S1 RNA binding domain
BBJ33_RS00395	PF07228	Stage II sporulation protein E (SpoIIE)
BBJ33_RS00400	PF00092	von Willebrand factor type A domain
BBJ33_RS00405	PF00069	Protein kinase domain
BBJ33_RS00410	PF09179	TilS substrate binding domain
BBJ33_RS00410	PF11734	TilS substrate C-terminal domain
BBJ33_RS00410	PF01171	PP-loop family
BBJ33_RS00415	PF00156	Phosphoribosyl transferase domain
BBJ33_RS00420	PF01434	Peptidase family M41
BBJ33_RS00420	PF17862	AAA+ lid domain
BBJ33_RS00420	PF00004	ATPase family associated with various cellular activities (AAA)
BBJ33_RS00420	PF06480	FtsH Extracellular
BBJ33_RS00425	PF03309	Type III pantothenate kinase
BBJ33_RS00430	PF01430	Hsp33 protein
BBJ33_RS00435	PF13145	PPIC-type PPIASE domain
BBJ33_RS00440	PF00291	Pyridoxal-phosphate dependent enzyme
BBJ33_RS00445	PF00425	chorismate binding enzyme
BBJ33_RS00445	PF04715	Anthranilate synthase component I, N terminal region
BBJ33_RS00450	PF00117	Glutamine amidotransferase class-I
BBJ33_RS00455	PF01063	Amino-transferase class IV
BBJ33_RS00460	PF00809	Pterin binding enzyme
BBJ33_RS00465	PF02152	Dihydroneopterin aldolase
BBJ33_RS00470	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
BBJ33_RS00475	PF01381	Helix-turn-helix
BBJ33_RS00480	PF01207	Dihydrouridine synthase (Dus)
BBJ33_RS00485	PF00152	tRNA synthetases class II (D, K and N) 
BBJ33_RS00485	PF01336	OB-fold nucleic acid binding domain
BBJ33_RS00565	PF05848	CtsR N-terminal HTH domain
BBJ33_RS00565	PF17727	CtsR C-terminal dimerization domain
BBJ33_RS00570	PF02151	UvrB/uvrC motif
BBJ33_RS00575	PF00217	ATP:guanido phosphotransferase, C-terminal catalytic domain
BBJ33_RS00580	PF07724	AAA domain (Cdc48 subfamily)
BBJ33_RS00580	PF02861	Clp amino terminal domain, pathogenicity island component
BBJ33_RS00580	PF17871	AAA lid domain
BBJ33_RS00580	PF00004	ATPase family associated with various cellular activities (AAA)
BBJ33_RS00580	PF10431	C-terminal, D2-small domain, of ClpB protein 
BBJ33_RS00585	PF18073	Rubredoxin metal binding domain
BBJ33_RS00590	PF10635	DisA bacterial checkpoint controller linker region 
BBJ33_RS00590	PF02457	DisA bacterial checkpoint controller nucleotide-binding
BBJ33_RS00600	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
BBJ33_RS00605	PF02542	YgbB family
BBJ33_RS00610	PF00749	tRNA synthetases class I (E and Q), catalytic domain
BBJ33_RS00615	PF00132	Bacterial transferase hexapeptide (six repeats)
BBJ33_RS00615	PF06426	Serine acetyltransferase, N-terminal 
BBJ33_RS00620	PF01406	tRNA synthetases class I (C) catalytic domain
BBJ33_RS00620	PF09190	DALR domain
BBJ33_RS00625	PF00636	Ribonuclease III domain
BBJ33_RS00630	PF08032	RNA 2'-O ribose methyltransferase substrate binding
BBJ33_RS00630	PF00588	SpoU rRNA Methylase family
BBJ33_RS00635	PF05991	YacP-like NYN domain
BBJ33_RS00640	PF08281	Sigma-70, region 4
BBJ33_RS00640	PF04542	Sigma-70 region 2 
BBJ33_RS00645	PF00471	Ribosomal protein L33
BBJ33_RS00650	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
BBJ33_RS00655	PF02357	Transcription termination factor nusG
BBJ33_RS00655	PF00467	KOW motif
BBJ33_RS00660	PF00298	Ribosomal protein L11, RNA binding domain
BBJ33_RS00660	PF03946	Ribosomal protein L11, N-terminal domain
BBJ33_RS00665	PF00687	Ribosomal protein L1p/L10e family
BBJ33_RS00670	PF00466	Ribosomal protein L10
BBJ33_RS00675	PF00542	Ribosomal protein L7/L12 C-terminal domain
BBJ33_RS00675	PF16320	Ribosomal protein L7/L12 dimerisation domain
BBJ33_RS00680	PF05175	Methyltransferase small domain
BBJ33_RS00685	PF04561	RNA polymerase Rpb2, domain 2
BBJ33_RS00685	PF04563	RNA polymerase beta subunit
BBJ33_RS00685	PF04560	RNA polymerase Rpb2, domain 7
BBJ33_RS00685	PF00562	RNA polymerase Rpb2, domain 6
BBJ33_RS00685	PF04565	RNA polymerase Rpb2, domain 3
BBJ33_RS00685	PF10385	RNA polymerase beta subunit external 1 domain
BBJ33_RS00690	PF04997	RNA polymerase Rpb1, domain 1
BBJ33_RS00690	PF05000	RNA polymerase Rpb1, domain 4
BBJ33_RS00690	PF04998	RNA polymerase Rpb1, domain 5
BBJ33_RS00690	PF04983	RNA polymerase Rpb1, domain 3
BBJ33_RS00690	PF00623	RNA polymerase Rpb1, domain 2
BBJ33_RS00695	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
BBJ33_RS00700	PF00164	Ribosomal protein S12/S23
BBJ33_RS00705	PF00177	Ribosomal protein S7p/S5e
BBJ33_RS00710	PF03144	Elongation factor Tu domain 2
BBJ33_RS00710	PF00009	Elongation factor Tu GTP binding domain
BBJ33_RS00710	PF03764	Elongation factor G, domain IV
BBJ33_RS00710	PF00679	Elongation factor G C-terminus
BBJ33_RS00710	PF14492	Elongation Factor G, domain II
BBJ33_RS00715	PF03143	Elongation factor Tu C-terminal domain
BBJ33_RS00715	PF03144	Elongation factor Tu domain 2
BBJ33_RS00715	PF00009	Elongation factor Tu GTP binding domain
BBJ33_RS00720	PF12146	Serine aminopeptidase, S33
BBJ33_RS00725	PF00338	Ribosomal protein S10p/S20e
BBJ33_RS00730	PF00297	Ribosomal protein L3
BBJ33_RS00735	PF00573	Ribosomal protein L4/L1 family
BBJ33_RS00740	PF00276	Ribosomal protein L23
BBJ33_RS00745	PF00181	Ribosomal Proteins L2, RNA binding domain
BBJ33_RS00745	PF03947	Ribosomal Proteins L2, C-terminal domain
BBJ33_RS00750	PF00203	Ribosomal protein S19
BBJ33_RS00755	PF00237	Ribosomal protein L22p/L17e
BBJ33_RS00760	PF07650	KH domain
BBJ33_RS00760	PF00189	Ribosomal protein S3, C-terminal domain
BBJ33_RS00765	PF00252	Ribosomal protein L16p/L10e
BBJ33_RS00770	PF00831	Ribosomal L29 protein
BBJ33_RS00775	PF00366	Ribosomal protein S17
BBJ33_RS00780	PF00238	Ribosomal protein L14p/L23e
BBJ33_RS00785	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
BBJ33_RS00785	PF00467	KOW motif
BBJ33_RS00790	PF00281	Ribosomal protein L5
BBJ33_RS00790	PF00673	ribosomal L5P family C-terminus
BBJ33_RS00795	PF00410	Ribosomal protein S8
BBJ33_RS00800	PF00347	Ribosomal protein L6
BBJ33_RS00805	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
BBJ33_RS00810	PF00333	Ribosomal protein S5, N-terminal domain
BBJ33_RS00810	PF03719	Ribosomal protein S5, C-terminal domain
BBJ33_RS00815	PF00327	Ribosomal protein L30p/L7e
BBJ33_RS00820	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
BBJ33_RS00825	PF00344	SecY translocase
BBJ33_RS00830	PF05191	Adenylate kinase, active site lid
BBJ33_RS00835	PF00557	Metallopeptidase family M24
BBJ33_RS00840	PF01176	Translation initiation factor 1A / IF-1
BBJ33_RS00845	PF00444	Ribosomal protein L36
BBJ33_RS00850	PF00416	Ribosomal protein S13/S18
BBJ33_RS00855	PF00411	Ribosomal protein S11
BBJ33_RS00860	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
BBJ33_RS00860	PF01000	RNA polymerase Rpb3/RpoA insert domain
BBJ33_RS00860	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
BBJ33_RS00865	PF01196	Ribosomal protein L17
BBJ33_RS00870	PF00005	ABC transporter
BBJ33_RS00875	PF00005	ABC transporter
BBJ33_RS00880	PF02361	Cobalt transport protein
BBJ33_RS00885	PF01416	tRNA pseudouridine synthase
BBJ33_RS00890	PF00572	Ribosomal protein L13
BBJ33_RS00895	PF00380	Ribosomal protein S9/S16
BBJ33_RS00900	PF08241	Methyltransferase domain
BBJ33_RS00905	PF05163	DinB family
BBJ33_RS00910	PF10730	Protein of unknown function (DUF2521)
BBJ33_RS00915	PF01520	N-acetylmuramoyl-L-alanine amidase
BBJ33_RS00920	PF10609	NUBPL iron-transfer P-loop NTPase
BBJ33_RS00925	PF17898	Spore germination GerD central core domain
BBJ33_RS00930	PF14089	KinB-signalling pathway activation in sporulation
BBJ33_RS00935	PF01522	Polysaccharide deacetylase
BBJ33_RS00995	PF07690	Major Facilitator Superfamily
BBJ33_RS01000	PF00202	Aminotransferase class-III
BBJ33_RS01010	PF00107	Zinc-binding dehydrogenase
BBJ33_RS01010	PF08240	Alcohol dehydrogenase GroES-like domain
BBJ33_RS01015	PF01740	STAS domain
BBJ33_RS01015	PF00916	Sulfate permease family
BBJ33_RS01020	PF01758	Sodium Bile acid symporter family
BBJ33_RS01025	PF00756	Putative esterase
BBJ33_RS01030	PF01032	FecCD transport family
BBJ33_RS01035	PF01032	FecCD transport family
BBJ33_RS01040	PF01497	Periplasmic binding protein
BBJ33_RS01045	PF01497	Periplasmic binding protein
BBJ33_RS01045	PF12833	Helix-turn-helix domain
BBJ33_RS01050	PF07075	Protein of unknown function (DUF1343)
BBJ33_RS01055	PF00933	Glycosyl hydrolase family 3 N terminal domain
BBJ33_RS01055	PF01915	Glycosyl hydrolase family 3 C-terminal domain
BBJ33_RS01060	PF00144	Beta-lactamase
BBJ33_RS01065	PF02378	Phosphotransferase system, EIIC 
BBJ33_RS01065	PF00367	phosphotransferase system, EIIB
BBJ33_RS01070	PF01380	SIS domain
BBJ33_RS01080	PF04463	Protein of unknown function (DUF523)
BBJ33_RS01110	PF04542	Sigma-70 region 2 
BBJ33_RS01110	PF08281	Sigma-70, region 4
BBJ33_RS01115	PF13490	Putative zinc-finger
BBJ33_RS01120	PF02457	DisA bacterial checkpoint controller nucleotide-binding
BBJ33_RS01125	PF07949	YbbR-like protein
BBJ33_RS01130	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
BBJ33_RS01130	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
BBJ33_RS01130	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
BBJ33_RS01130	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
BBJ33_RS01135	PF01380	SIS domain
BBJ33_RS01140	PF00005	ABC transporter
BBJ33_RS01155	PF16226	Domain of unknown function (DUF4885)
BBJ33_RS01160	PF00248	Aldo/keto reductase family
BBJ33_RS01165	PF04172	LrgB-like family 
BBJ33_RS01170	PF03788	LrgA family
BBJ33_RS01175	PF01047	MarR family
BBJ33_RS01180	PF00324	Amino acid permease
BBJ33_RS01185	PF13419	Haloacid dehalogenase-like hydrolase
BBJ33_RS01190	PF07730	Histidine kinase
BBJ33_RS01195	PF00196	Bacterial regulatory proteins, luxR family
BBJ33_RS01195	PF00072	Response regulator receiver domain
BBJ33_RS01200	PF00005	ABC transporter
BBJ33_RS01220	PF16219	Domain of unknown function (DUF4879)
BBJ33_RS01225	PF17334	Minor curli fiber component A
BBJ33_RS01240	PF13520	Amino acid permease
BBJ33_RS01245	PF03009	Glycerophosphoryl diester phosphodiesterase family
BBJ33_RS01250	PF07690	Major Facilitator Superfamily
BBJ33_RS01255	PF10852	Protein of unknown function (DUF2651)   
BBJ33_RS01260	PF03241	4-hydroxyphenylacetate 3-hydroxylase C terminal
BBJ33_RS01260	PF11794	4-hydroxyphenylacetate 3-hydroxylase N terminal
BBJ33_RS01270	PF08924	Domain of unknown function (DUF1906)
BBJ33_RS01270	PF01471	Putative peptidoglycan binding domain
BBJ33_RS01285	PF00465	Iron-containing alcohol dehydrogenase 
BBJ33_RS01290	PF02222	ATP-grasp domain
BBJ33_RS01295	PF01066	CDP-alcohol phosphatidyltransferase
BBJ33_RS01300	PF09335	SNARE associated Golgi protein
BBJ33_RS01305	PF02666	Phosphatidylserine decarboxylase
BBJ33_RS01315	PF00581	Rhodanese-like domain
BBJ33_RS01315	PF12368	Rhodanase C-terminal
BBJ33_RS01315	PF17773	UPF0176 acylphosphatase like domain
BBJ33_RS01320	PF00375	Sodium:dicarboxylate symporter family
BBJ33_RS01325	PF01063	Amino-transferase class IV
BBJ33_RS01330	PF00324	Amino acid permease
BBJ33_RS01335	PF02574	Homocysteine S-methyltransferase
BBJ33_RS01340	PF01235	Sodium:alanine symporter family
BBJ33_RS01345	PF04960	Glutaminase
BBJ33_RS01350	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS01355	PF08664	YcbB domain
BBJ33_RS01355	PF00072	Response regulator receiver domain
BBJ33_RS01360	PF01636	Phosphotransferase enzyme family
BBJ33_RS01365	PF15777	Tryptophan RNA-binding attenuator protein inhibitory protein
BBJ33_RS01370	PF01545	Cation efflux family
BBJ33_RS01370	PF16916	Dimerisation domain of Zinc Transporter
BBJ33_RS01375	PF00881	Nitroreductase family
BBJ33_RS01380	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BBJ33_RS01385	PF07681	DoxX
BBJ33_RS01390	PF00085	Thioredoxin
BBJ33_RS01395	PF10710	Protein of unknown function (DUF2512)
BBJ33_RS01400	PF07486	Cell Wall Hydrolase
BBJ33_RS01405	PF09423	PhoD-like phosphatase
BBJ33_RS01405	PF16655	PhoD-like phosphatase, N-terminal domain
BBJ33_RS01410	PF02416	mttA/Hcf106 family
BBJ33_RS01415	PF00902	Sec-independent protein translocase protein (TatC)
BBJ33_RS01420	PF01470	Pyroglutamyl peptidase
BBJ33_RS01425	PF00266	Aminotransferase class-V
BBJ33_RS01430	PF07690	Major Facilitator Superfamily
BBJ33_RS01435	PF00440	Bacterial regulatory proteins, tetR family
BBJ33_RS01440	PF00710	Asparaginase, N-terminal
BBJ33_RS01440	PF17763	Glutaminase/Asparaginase C-terminal domain
BBJ33_RS01445	PF01674	Lipase (class 2)
BBJ33_RS01450	PF05225	helix-turn-helix, Psq domain
BBJ33_RS01450	PF02810	SEC-C motif
BBJ33_RS01455	PF00248	Aldo/keto reductase family
BBJ33_RS01460	PF11611	Domain of unknown function (DUF4352)
BBJ33_RS01460	PF17118	Domain of unknown function (DUF5105)
BBJ33_RS01465	PF16244	Domain of unknown function (DUF4901)
BBJ33_RS01470	PF16244	Domain of unknown function (DUF4901)
BBJ33_RS01475	PF13539	D-alanyl-D-alanine carboxypeptidase
BBJ33_RS01480	PF18801	response regulator aspartate phosphatase H, N terminal
BBJ33_RS01490	PF00128	Alpha amylase, catalytic domain
BBJ33_RS01495	PF01297	Zinc-uptake complex component A periplasmic
BBJ33_RS01500	PF00005	ABC transporter
BBJ33_RS01505	PF00950	ABC 3 transport family
BBJ33_RS01510	PF00296	Luciferase-like monooxygenase
BBJ33_RS01515	PF02342	TerD domain
BBJ33_RS01520	PF02342	TerD domain
BBJ33_RS01525	PF02342	TerD domain
BBJ33_RS01530	PF03741	Integral membrane protein TerC family
BBJ33_RS01535	PF14266	Putative component of 'biosynthetic module'
BBJ33_RS01540	PF05816	Toxic anion resistance protein (TelA)
BBJ33_RS01545	PF07690	Major Facilitator Superfamily
BBJ33_RS01550	PF00571	CBS domain
BBJ33_RS01550	PF00005	ABC transporter
BBJ33_RS01555	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS01560	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
BBJ33_RS01565	PF07687	Peptidase dimerisation domain
BBJ33_RS01565	PF01546	Peptidase family M20/M25/M40
BBJ33_RS01570	PF03606	C4-dicarboxylate anaerobic carrier
BBJ33_RS01580	PF16738	Starch-binding module 26
BBJ33_RS01580	PF00128	Alpha amylase, catalytic domain
BBJ33_RS01585	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BBJ33_RS01585	PF00056	lactate/malate dehydrogenase, NAD binding domain
BBJ33_RS01590	PF07690	Major Facilitator Superfamily
BBJ33_RS01595	PF01047	MarR family
BBJ33_RS01600	PF01810	LysE type translocator
BBJ33_RS01605	PF08892	YqcI/YcgG family
BBJ33_RS01610	PF00324	Amino acid permease
BBJ33_RS01615	PF09347	Domain of unknown function (DUF1989)
BBJ33_RS01620	PF02540	NAD synthase
BBJ33_RS01625	PF12197	Bacillus cereus group antimicrobial protein
BBJ33_RS01640	PF07690	Major Facilitator Superfamily
BBJ33_RS01645	PF01202	Shikimate kinase
BBJ33_RS01650	PF05448	Acetyl xylan esterase (AXE1)
BBJ33_RS01655	PF10127	RNA repair pathway DNA polymerase beta family
BBJ33_RS01660	PF01619	Proline dehydrogenase
BBJ33_RS01665	PF00171	Aldehyde dehydrogenase family
BBJ33_RS01670	PF00474	Sodium:solute symporter family
BBJ33_RS01675	PF17853	GGDEF-like domain
BBJ33_RS01675	PF13556	PucR C-terminal helix-turn-helix domain
BBJ33_RS01680	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BBJ33_RS01685	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BBJ33_RS01690	PF00355	Rieske [2Fe-2S] domain
BBJ33_RS01695	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
BBJ33_RS01695	PF04324	BFD-like [2Fe-2S] binding domain
BBJ33_RS01695	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
BBJ33_RS01695	PF18267	Rubredoxin NAD+ reductase C-terminal domain
BBJ33_RS01695	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BBJ33_RS01700	PF02492	CobW/HypB/UreG, nucleotide-binding domain
BBJ33_RS01700	PF07683	Cobalamin synthesis protein cobW C-terminal domain
BBJ33_RS01705	PF08240	Alcohol dehydrogenase GroES-like domain
BBJ33_RS01705	PF13823	Alcohol dehydrogenase GroES-associated
BBJ33_RS01705	PF00107	Zinc-binding dehydrogenase
BBJ33_RS01710	PF06271	RDD family
BBJ33_RS01715	PF10925	Protein of unknown function (DUF2680)
BBJ33_RS01720	PF00232	Glycosyl hydrolase family 1
BBJ33_RS01725	PF11033	Competence protein J (ComJ)
BBJ33_RS01730	PF14040	Deoxyribonuclease NucA/NucB
BBJ33_RS01735	PF01380	SIS domain
BBJ33_RS01740	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
BBJ33_RS01745	PF01638	HxlR-like helix-turn-helix
BBJ33_RS01750	PF00668	Condensation domain
BBJ33_RS01750	PF00550	Phosphopantetheine attachment site
BBJ33_RS01750	PF00501	AMP-binding enzyme
BBJ33_RS01750	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS01755	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS01755	PF00668	Condensation domain
BBJ33_RS01755	PF00550	Phosphopantetheine attachment site
BBJ33_RS01755	PF00501	AMP-binding enzyme
BBJ33_RS01760	PF00668	Condensation domain
BBJ33_RS01760	PF00501	AMP-binding enzyme
BBJ33_RS01760	PF00975	Thioesterase domain
BBJ33_RS01760	PF00550	Phosphopantetheine attachment site
BBJ33_RS01760	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS01765	PF00975	Thioesterase domain
BBJ33_RS01770	PF07685	CobB/CobQ-like glutamine amidotransferase domain
BBJ33_RS01770	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
BBJ33_RS01770	PF00155	Aminotransferase class I and II
BBJ33_RS01775	PF01648	4'-phosphopantetheinyl transferase superfamily
BBJ33_RS01785	PF00005	ABC transporter
BBJ33_RS01790	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS01795	PF00497	Bacterial extracellular solute-binding proteins, family 3
BBJ33_RS01800	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BBJ33_RS01800	PF03466	LysR substrate binding domain
BBJ33_RS01805	PF02441	Flavoprotein
BBJ33_RS01810	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
BBJ33_RS01825	PF00854	POT family
BBJ33_RS01830	PF13229	Right handed beta helix region
BBJ33_RS01830	PF12708	Pectate lyase superfamily protein
BBJ33_RS01840	PF03323	Bacillus/Clostridium GerA spore germination protein
BBJ33_RS01845	PF05504	Spore germination B3/ GerAC like, C-terminal 
BBJ33_RS01850	PF03845	Spore germination protein
BBJ33_RS01855	PF00296	Luciferase-like monooxygenase
BBJ33_RS01860	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS01865	PF00497	Bacterial extracellular solute-binding proteins, family 3
BBJ33_RS01870	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS01875	PF00005	ABC transporter
BBJ33_RS01880	PF07687	Peptidase dimerisation domain
BBJ33_RS01880	PF01546	Peptidase family M20/M25/M40
BBJ33_RS01885	PF03972	MmgE/PrpD family
BBJ33_RS01890	PF00005	ABC transporter
BBJ33_RS01895	PF12704	MacB-like periplasmic core domain
BBJ33_RS01895	PF02687	FtsX-like permease family
BBJ33_RS01900	PF00072	Response regulator receiver domain
BBJ33_RS01900	PF00486	Transcriptional regulatory protein, C terminal
BBJ33_RS01905	PF00512	His Kinase A (phospho-acceptor) domain
BBJ33_RS01905	PF00672	HAMP domain
BBJ33_RS01905	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS01910	PF18801	response regulator aspartate phosphatase H, N terminal
BBJ33_RS01915	PF11131	Rap-phr extracellular signalling
BBJ33_RS01920	PF00696	Amino acid kinase family
BBJ33_RS01920	PF13840	ACT domain 
BBJ33_RS01925	PF01032	FecCD transport family
BBJ33_RS01930	PF01032	FecCD transport family
BBJ33_RS01935	PF00005	ABC transporter
BBJ33_RS01940	PF01497	Periplasmic binding protein
BBJ33_RS01945	PF07690	Major Facilitator Superfamily
BBJ33_RS01950	PF00440	Bacterial regulatory proteins, tetR family
BBJ33_RS01955	PF00881	Nitroreductase family
BBJ33_RS01960	PF03992	Antibiotic biosynthesis monooxygenase
BBJ33_RS01965	PF01022	Bacterial regulatory protein, arsR family
BBJ33_RS01970	PF00155	Aminotransferase class I and II
BBJ33_RS01970	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS01975	PF00202	Aminotransferase class-III
BBJ33_RS01980	PF00171	Aldehyde dehydrogenase family
BBJ33_RS01985	PF06800	Sugar transport protein
BBJ33_RS01995	PF07987	Domain of unkown function (DUF1775)
BBJ33_RS02000	PF05425	Copper resistance protein D
BBJ33_RS02000	PF04234	CopC domain
BBJ33_RS02000	PF13115	YtkA-like
BBJ33_RS02005	PF08220	DeoR-like helix-turn-helix domain
BBJ33_RS02005	PF05573	NosL
BBJ33_RS02015	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BBJ33_RS02015	PF02378	Phosphotransferase system, EIIC 
BBJ33_RS02020	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BBJ33_RS02025	PF01232	Mannitol dehydrogenase Rossmann domain
BBJ33_RS02025	PF08125	Mannitol dehydrogenase C-terminal domain
BBJ33_RS02030	PF07977	FabA-like domain
BBJ33_RS02040	PF03746	LamB/YcsF family
BBJ33_RS02045	PF01566	Natural resistance-associated macrophage protein
BBJ33_RS02050	PF07286	Protein of unknown function (DUF1445)
BBJ33_RS02055	PF02682	Carboxyltransferase domain, subdomain C and D
BBJ33_RS02060	PF02626	Carboxyltransferase domain, subdomain A and B 
BBJ33_RS02065	PF09339	IclR helix-turn-helix domain
BBJ33_RS02065	PF01614	Bacterial transcriptional regulator
BBJ33_RS02070	PF13472	GDSL-like Lipase/Acylhydrolase family
BBJ33_RS02075	PF13129	Protein of unknown function (DUF3953)
BBJ33_RS02080	PF03992	Antibiotic biosynthesis monooxygenase
BBJ33_RS02085	PF05223	NTF2-like N-terminal transpeptidase domain
BBJ33_RS02085	PF03717	Penicillin-binding Protein dimerisation domain
BBJ33_RS02085	PF00905	Penicillin binding protein transpeptidase domain
BBJ33_RS02090	PF00248	Aldo/keto reductase family
BBJ33_RS02095	PF05043	Mga helix-turn-helix domain
BBJ33_RS02095	PF00874	PRD domain
BBJ33_RS02095	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BBJ33_RS02095	PF08279	HTH domain
BBJ33_RS02095	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BBJ33_RS02100	PF00501	AMP-binding enzyme
BBJ33_RS02100	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS02115	PF13302	Acetyltransferase (GNAT) domain
BBJ33_RS02120	PF16242	Pyridoxamine 5'-phosphate oxidase like
BBJ33_RS02125	PF10997	Alternate to MurJ
BBJ33_RS02130	PF12823	Domain of unknown function (DUF3817)
BBJ33_RS02135	PF01037	Lrp/AsnC ligand binding domain
BBJ33_RS02140	PF01131	DNA topoisomerase
BBJ33_RS02140	PF01751	Toprim domain
BBJ33_RS02150	PF00990	Diguanylate cyclase, GGDEF domain
BBJ33_RS02155	PF10096	Uncharacterized protein conserved in bacteria (DUF2334)
BBJ33_RS02165	PF03170	Bacterial cellulose synthase subunit
BBJ33_RS02170	PF13520	Amino acid permease
BBJ33_RS02175	PF00293	NUDIX domain
BBJ33_RS02180	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BBJ33_RS02180	PF00205	Thiamine pyrophosphate enzyme, central domain
BBJ33_RS02180	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BBJ33_RS02220	PF18801	response regulator aspartate phosphatase H, N terminal
BBJ33_RS02220	PF13176	Tetratricopeptide repeat
BBJ33_RS02250	PF01566	Natural resistance-associated macrophage protein
BBJ33_RS02265	PF09954	Uncharacterized protein conserved in bacteria (DUF2188)
BBJ33_RS02270	PF17314	Family of unknown function (DUF5360)
BBJ33_RS02275	PF00893	Small Multidrug Resistance protein
BBJ33_RS02280	PF12787	EcsC protein family
BBJ33_RS02285	PF10685	Stress-induced bacterial acidophilic repeat motif
BBJ33_RS02285	PF00477	Small hydrophilic plant seed protein
BBJ33_RS02290	PF07883	Cupin domain
BBJ33_RS02295	PF16291	Domain of unknown function (DUF4937
BBJ33_RS02300	PF05067	Manganese containing catalase
BBJ33_RS02305	PF03480	Bacterial extracellular solute-binding protein, family 7
BBJ33_RS02310	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS02310	PF17203	Single cache domain 3
BBJ33_RS02310	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
BBJ33_RS02315	PF00072	Response regulator receiver domain
BBJ33_RS02315	PF08279	HTH domain
BBJ33_RS02320	PF00375	Sodium:dicarboxylate symporter family
BBJ33_RS02325	PF01594	AI-2E family transporter
BBJ33_RS02330	PF00005	ABC transporter
BBJ33_RS02345	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BBJ33_RS02345	PF02770	Acyl-CoA dehydrogenase, middle domain
BBJ33_RS02345	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
BBJ33_RS02350	PF13040	Fur-regulated basic protein B
BBJ33_RS02360	PF01545	Cation efflux family
BBJ33_RS02360	PF16916	Dimerisation domain of Zinc Transporter
BBJ33_RS02365	PF00085	Thioredoxin
BBJ33_RS02370	PF01820	D-ala D-ala ligase N-terminus
BBJ33_RS02370	PF07478	D-ala D-ala ligase C-terminus
BBJ33_RS02375	PF01225	Mur ligase family, catalytic domain
BBJ33_RS02375	PF02875	Mur ligase family, glutamate ligase domain
BBJ33_RS02375	PF08245	Mur ligase middle domain
BBJ33_RS02380	PF00271	Helicase conserved C-terminal domain
BBJ33_RS02380	PF00270	DEAD/DEAH box helicase
BBJ33_RS02385	PF03703	Bacterial PH domain
BBJ33_RS02390	PF03703	Bacterial PH domain
BBJ33_RS02395	PF01694	Rhomboid family
BBJ33_RS02400	PF01648	4'-phosphopantetheinyl transferase superfamily
BBJ33_RS02410	PF01168	Alanine racemase, N-terminal domain
BBJ33_RS02410	PF00842	Alanine racemase, C-terminal domain
BBJ33_RS02415	PF01402	Ribbon-helix-helix protein, copG family
BBJ33_RS02420	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system
BBJ33_RS02425	PF08678	Rsbr N terminal
BBJ33_RS02425	PF01740	STAS domain
BBJ33_RS02430	PF01740	STAS domain
BBJ33_RS02435	PF13581	Histidine kinase-like ATPase domain
BBJ33_RS02440	PF08673	Phosphoserine phosphatase RsbU, N-terminal domain
BBJ33_RS02440	PF07228	Stage II sporulation protein E (SpoIIE)
BBJ33_RS02445	PF01740	STAS domain
BBJ33_RS02450	PF13581	Histidine kinase-like ATPase domain
BBJ33_RS02455	PF04539	Sigma-70 region 3
BBJ33_RS02455	PF04542	Sigma-70 region 2 
BBJ33_RS02455	PF04545	Sigma-70, region 4
BBJ33_RS02460	PF07228	Stage II sporulation protein E (SpoIIE)
BBJ33_RS02465	PF16921	Tex protein YqgF-like domain
BBJ33_RS02465	PF17674	HHH domain
BBJ33_RS02465	PF09371	Tex-like protein N-terminal domain
BBJ33_RS02465	PF00575	S1 RNA binding domain
BBJ33_RS02470	PF10263	SprT-like family
BBJ33_RS02510	PF14729	Domain of unknown function with cystatin-like fold (DUF4467) 
BBJ33_RS02540	PF00561	alpha/beta hydrolase fold
BBJ33_RS02545	PF07690	Major Facilitator Superfamily
BBJ33_RS02550	PF07859	alpha/beta hydrolase fold
BBJ33_RS02555	PF02566	OsmC-like protein
BBJ33_RS02560	PF01047	MarR family
BBJ33_RS02565	PF02082	Transcriptional regulator
BBJ33_RS02570	PF13460	NAD(P)H-binding 
BBJ33_RS02575	PF00313	'Cold-shock' DNA-binding domain
BBJ33_RS02580	PF02559	CarD-like/TRCF domain
BBJ33_RS02585	PF02583	Metal-sensitive transcriptional repressor
BBJ33_RS02590	PF13686	DsrE/DsrF/DrsH-like family
BBJ33_RS02600	PF00581	Rhodanese-like domain
BBJ33_RS02600	PF01206	Sulfurtransferase TusA
BBJ33_RS02605	PF00753	Metallo-beta-lactamase superfamily
BBJ33_RS02605	PF00581	Rhodanese-like domain
BBJ33_RS02610	PF01206	Sulfurtransferase TusA
BBJ33_RS02615	PF01925	Sulfite exporter TauE/SafE
BBJ33_RS02620	PF01177	Asp/Glu/Hydantoin racemase
BBJ33_RS02635	PF01734	Patatin-like phospholipase
BBJ33_RS02645	PF00291	Pyridoxal-phosphate dependent enzyme
BBJ33_RS02650	PF07729	FCD domain
BBJ33_RS02650	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS02655	PF01042	Endoribonuclease L-PSP
BBJ33_RS02665	PF07687	Peptidase dimerisation domain
BBJ33_RS02665	PF01546	Peptidase family M20/M25/M40
BBJ33_RS02670	PF02311	AraC-like ligand binding domain
BBJ33_RS02670	PF12833	Helix-turn-helix domain
BBJ33_RS02675	PF07687	Peptidase dimerisation domain
BBJ33_RS02675	PF01546	Peptidase family M20/M25/M40
BBJ33_RS02680	PF00155	Aminotransferase class I and II
BBJ33_RS02680	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS02685	PF07690	Major Facilitator Superfamily
BBJ33_RS02690	PF00293	NUDIX domain
BBJ33_RS02705	PF08031	Berberine and berberine like 
BBJ33_RS02705	PF01565	FAD binding domain 
BBJ33_RS02715	PF01545	Cation efflux family
BBJ33_RS02715	PF16916	Dimerisation domain of Zinc Transporter
BBJ33_RS02735	PF00701	Dihydrodipicolinate synthetase family
BBJ33_RS02745	PF04055	Radical SAM superfamily
BBJ33_RS02760	PF08240	Alcohol dehydrogenase GroES-like domain
BBJ33_RS02760	PF00107	Zinc-binding dehydrogenase
BBJ33_RS02765	PF13411	MerR HTH family regulatory protein
BBJ33_RS02775	PF00155	Aminotransferase class I and II
BBJ33_RS02775	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS02790	PF07690	Major Facilitator Superfamily
BBJ33_RS02795	PF00440	Bacterial regulatory proteins, tetR family
BBJ33_RS02795	PF16859	Tetracyclin repressor-like, C-terminal domain
BBJ33_RS02800	PF07875	Coat F domain
BBJ33_RS02810	PF00107	Zinc-binding dehydrogenase
BBJ33_RS02810	PF13823	Alcohol dehydrogenase GroES-associated
BBJ33_RS02810	PF08240	Alcohol dehydrogenase GroES-like domain
BBJ33_RS02815	PF07875	Coat F domain
BBJ33_RS02825	PF07730	Histidine kinase
BBJ33_RS02825	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS02830	PF00072	Response regulator receiver domain
BBJ33_RS02830	PF00196	Bacterial regulatory proteins, luxR family
BBJ33_RS02835	PF03176	MMPL family
BBJ33_RS02840	PF07722	Peptidase C26
BBJ33_RS02845	PF00005	ABC transporter
BBJ33_RS02845	PF12848	ABC transporter
BBJ33_RS02850	PF13302	Acetyltransferase (GNAT) domain
BBJ33_RS02855	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BBJ33_RS02855	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BBJ33_RS02865	PF07690	Major Facilitator Superfamily
BBJ33_RS02870	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS02870	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS02880	PF01925	Sulfite exporter TauE/SafE
BBJ33_RS02885	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS02890	PF06445	GyrI-like small molecule binding domain
BBJ33_RS02890	PF13411	MerR HTH family regulatory protein
BBJ33_RS02895	PF00892	EamA-like transporter family
BBJ33_RS02900	PF00293	NUDIX domain
BBJ33_RS02905	PF08241	Methyltransferase domain
BBJ33_RS02910	PF00180	Isocitrate/isopropylmalate dehydrogenase
BBJ33_RS02915	PF07729	FCD domain
BBJ33_RS02915	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS02920	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
BBJ33_RS02935	PF11954	Domain of unknown function (DUF3471)
BBJ33_RS02935	PF00144	Beta-lactamase
BBJ33_RS02940	PF07563	Protein of unknown function (DUF1541)
BBJ33_RS02945	PF07690	Major Facilitator Superfamily
BBJ33_RS02950	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS02950	PF07702	UTRA domain
BBJ33_RS02955	PF07729	FCD domain
BBJ33_RS02955	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS02960	PF07690	Major Facilitator Superfamily
BBJ33_RS02965	PF00893	Small Multidrug Resistance protein
BBJ33_RS02970	PF00893	Small Multidrug Resistance protein
BBJ33_RS02975	PF00440	Bacterial regulatory proteins, tetR family
BBJ33_RS02975	PF17934	Tetracyclin repressor-like, C-terminal domain
BBJ33_RS02980	PF13520	Amino acid permease
BBJ33_RS02990	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
BBJ33_RS02995	PF08240	Alcohol dehydrogenase GroES-like domain
BBJ33_RS02995	PF00107	Zinc-binding dehydrogenase
BBJ33_RS03000	PF00083	Sugar (and other) transporter
BBJ33_RS03040	PF02769	AIR synthase related protein, C-terminal domain
BBJ33_RS03040	PF00586	AIR synthase related protein, N-terminal domain
BBJ33_RS03045	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
BBJ33_RS03050	PF00814	Glycoprotease family
BBJ33_RS03055	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS03060	PF00814	Glycoprotease family
BBJ33_RS03065	PF00005	ABC transporter
BBJ33_RS03065	PF12848	ABC transporter
BBJ33_RS03065	PF16326	ABC transporter C-terminal domain
BBJ33_RS03070	PF01967	MoaC family
BBJ33_RS03075	PF02629	CoA binding domain
BBJ33_RS03075	PF06971	Putative DNA-binding protein N-terminus
BBJ33_RS03080	PF02416	mttA/Hcf106 family
BBJ33_RS03085	PF00902	Sec-independent protein translocase protein (TatC)
BBJ33_RS03090	PF14146	Domain of unknown function (DUF4305)
BBJ33_RS03095	PF02517	CPBP intramembrane metalloprotease
BBJ33_RS03100	PF00166	Chaperonin 10 Kd subunit
BBJ33_RS03105	PF00118	TCP-1/cpn60 chaperonin family
BBJ33_RS03110	PF07687	Peptidase dimerisation domain
BBJ33_RS03110	PF01546	Peptidase family M20/M25/M40
BBJ33_RS03140	PF00881	Nitroreductase family
BBJ33_RS03150	PF00005	ABC transporter
BBJ33_RS03160	PF13176	Tetratricopeptide repeat
BBJ33_RS03160	PF00931	NB-ARC domain
BBJ33_RS03165	PF00107	Zinc-binding dehydrogenase
BBJ33_RS03165	PF08240	Alcohol dehydrogenase GroES-like domain
BBJ33_RS03175	PF00294	pfkB family carbohydrate kinase
BBJ33_RS03180	PF14154	Domain of unknown function (DUF4306)
BBJ33_RS03185	PF04012	PspA/IM30 family
BBJ33_RS03190	PF08271	TFIIB zinc-binding
BBJ33_RS03195	PF04536	TPM domain
BBJ33_RS03200	PF13421	SPFH domain-Band 7 family
BBJ33_RS03205	PF01757	Acyltransferase family
BBJ33_RS03210	PF11738	Protein of unknown function (DUF3298)
BBJ33_RS03210	PF13739	Deacetylase PdaC
BBJ33_RS03215	PF04542	Sigma-70 region 2 
BBJ33_RS03215	PF08281	Sigma-70, region 4
BBJ33_RS03220	PF00107	Zinc-binding dehydrogenase
BBJ33_RS03220	PF08240	Alcohol dehydrogenase GroES-like domain
BBJ33_RS03225	PF03330	Lytic transglycolase
BBJ33_RS03230	PF07676	WD40-like Beta Propeller Repeat
BBJ33_RS03235	PF14169	Cold-inducible protein YdjO
BBJ33_RS03240	PF07731	Multicopper oxidase
BBJ33_RS03240	PF00394	Multicopper oxidase
BBJ33_RS03240	PF07732	Multicopper oxidase
BBJ33_RS03245	PF00324	Amino acid permease
BBJ33_RS03250	PF07726	ATPase family associated with various cellular activities (AAA)
BBJ33_RS03250	PF17863	AAA lid domain
BBJ33_RS03255	PF01882	Protein of unknown function DUF58
BBJ33_RS03260	PF01841	Transglutaminase-like superfamily
BBJ33_RS03260	PF13559	Domain of unknown function (DUF4129)
BBJ33_RS03260	PF11992	Domain of unknown function (DUF3488)
BBJ33_RS03265	PF02540	NAD synthase
BBJ33_RS03265	PF00958	GMP synthase C terminal domain
BBJ33_RS03265	PF00117	Glutamine amidotransferase class-I
BBJ33_RS03270	PF04542	Sigma-70 region 2 
BBJ33_RS03270	PF04545	Sigma-70, region 4
BBJ33_RS03280	PF00860	Permease family
BBJ33_RS03290	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BBJ33_RS03295	PF14044	NETI protein
BBJ33_RS03300	PF00731	AIR carboxylase
BBJ33_RS03305	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
BBJ33_RS03305	PF02222	ATP-grasp domain
BBJ33_RS03310	PF00206	Lyase
BBJ33_RS03310	PF10397	Adenylosuccinate lyase C-terminus
BBJ33_RS03315	PF01259	SAICAR synthetase
BBJ33_RS03320	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
BBJ33_RS03330	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
BBJ33_RS03330	PF02769	AIR synthase related protein, C-terminal domain
BBJ33_RS03330	PF00586	AIR synthase related protein, N-terminal domain
BBJ33_RS03335	PF00156	Phosphoribosyl transferase domain
BBJ33_RS03340	PF02769	AIR synthase related protein, C-terminal domain
BBJ33_RS03340	PF00586	AIR synthase related protein, N-terminal domain
BBJ33_RS03345	PF00551	Formyl transferase
BBJ33_RS03350	PF02142	MGS-like domain
BBJ33_RS03350	PF01808	AICARFT/IMPCHase bienzyme
BBJ33_RS03355	PF02844	Phosphoribosylglycinamide synthetase, N domain
BBJ33_RS03355	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
BBJ33_RS03355	PF02843	Phosphoribosylglycinamide synthetase, C domain
BBJ33_RS03360	PF11127	Protein of unknown function (DUF2892)
BBJ33_RS03365	PF01979	Amidohydrolase family
BBJ33_RS03365	PF13382	Adenine deaminase C-terminal domain
BBJ33_RS03370	PF11258	Protein of unknown function (DUF3048) N-terminal domain
BBJ33_RS03370	PF17479	Protein of unknown function (DUF3048) C-terminal domain
BBJ33_RS03375	PF01371	Trp repressor protein
BBJ33_RS03380	PF01645	Conserved region in glutamate synthase
BBJ33_RS03390	PF01884	PcrB family
BBJ33_RS03395	PF13361	UvrD-like helicase C-terminal domain
BBJ33_RS03395	PF00580	UvrD/REP helicase N-terminal domain
BBJ33_RS03400	PF03120	NAD-dependent DNA ligase OB-fold domain
BBJ33_RS03400	PF12826	Helix-hairpin-helix motif
BBJ33_RS03400	PF01653	NAD-dependent DNA ligase adenylation domain
BBJ33_RS03400	PF00533	BRCA1 C Terminus (BRCT) domain
BBJ33_RS03400	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
BBJ33_RS03405	PF07537	CamS sex pheromone cAM373 precursor
BBJ33_RS03410	PF01636	Phosphotransferase enzyme family
BBJ33_RS03415	PF02308	MgtC family
BBJ33_RS03420	PF00474	Sodium:solute symporter family
BBJ33_RS03425	PF02686	Glu-tRNAGln amidotransferase C subunit
BBJ33_RS03430	PF01425	Amidase
BBJ33_RS03435	PF02637	GatB domain
BBJ33_RS03435	PF02934	GatB/GatE catalytic domain
BBJ33_RS03440	PF00440	Bacterial regulatory proteins, tetR family
BBJ33_RS03445	PF00873	AcrB/AcrD/AcrF family
BBJ33_RS03450	PF00781	Diacylglycerol kinase catalytic domain
BBJ33_RS03455	PF05958	tRNA (Uracil-5-)-methyltransferase
BBJ33_RS03455	PF01938	TRAM domain
BBJ33_RS03465	PF00005	ABC transporter
BBJ33_RS03475	PF04634	Protein of unknown function, DUF600
BBJ33_RS03480	PF04634	Protein of unknown function, DUF600
BBJ33_RS03485	PF04740	LXG domain of WXG superfamily
BBJ33_RS03490	PF18593	CdiI immunity protein
BBJ33_RS03495	PF01709	Transcriptional regulator
BBJ33_RS03505	PF04439	Streptomycin adenylyltransferase
BBJ33_RS03510	PF11007	Spore coat associated protein JA (CotJA)
BBJ33_RS03515	PF12652	CotJB protein
BBJ33_RS03520	PF05067	Manganese containing catalase
BBJ33_RS03525	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS03535	PF04239	Protein of unknown function (DUF421)
BBJ33_RS03540	PF03992	Antibiotic biosynthesis monooxygenase
BBJ33_RS03545	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BBJ33_RS03550	PF01740	STAS domain
BBJ33_RS03550	PF14361	RsbT co-antagonist protein rsbRD N-terminal domain
BBJ33_RS03555	PF10055	Uncharacterized small protein (DUF2292)
BBJ33_RS03560	PF01687	Riboflavin kinase
BBJ33_RS03565	PF01027	Inhibitor of apoptosis-promoting Bax1
BBJ33_RS03570	PF01047	MarR family
BBJ33_RS03575	PF01494	FAD binding domain
BBJ33_RS03580	PF13037	Domain of unknown function (DUF3898)
BBJ33_RS03580	PF13039	Protein of unknown function (DUF3900)
BBJ33_RS03585	PF00667	FAD binding domain
BBJ33_RS03585	PF00175	Oxidoreductase NAD-binding domain 
BBJ33_RS03585	PF00067	Cytochrome P450
BBJ33_RS03585	PF00258	Flavodoxin
BBJ33_RS03595	PF00884	Sulfatase
BBJ33_RS03600	PF00483	Nucleotidyl transferase
BBJ33_RS03605	PF16363	GDP-mannose 4,6 dehydratase
BBJ33_RS03610	PF03407	Nucleotide-diphospho-sugar transferase
BBJ33_RS03615	PF00535	Glycosyl transferase family 2
BBJ33_RS03620	PF03407	Nucleotide-diphospho-sugar transferase
BBJ33_RS03625	PF07690	Major Facilitator Superfamily
BBJ33_RS03630	PF13520	Amino acid permease
BBJ33_RS03635	PF00171	Aldehyde dehydrogenase family
BBJ33_RS03640	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BBJ33_RS03650	PF00535	Glycosyl transferase family 2
BBJ33_RS03650	PF13181	Tetratricopeptide repeat
BBJ33_RS03655	PF00005	ABC transporter
BBJ33_RS03655	PF16326	ABC transporter C-terminal domain
BBJ33_RS03655	PF12848	ABC transporter
BBJ33_RS03660	PF13411	MerR HTH family regulatory protein
BBJ33_RS03665	PF07690	Major Facilitator Superfamily
BBJ33_RS03670	PF12848	ABC transporter
BBJ33_RS03670	PF00005	ABC transporter
BBJ33_RS03675	PF00271	Helicase conserved C-terminal domain
BBJ33_RS03675	PF00270	DEAD/DEAH box helicase
BBJ33_RS03685	PF00107	Zinc-binding dehydrogenase
BBJ33_RS03685	PF16884	N-terminal domain of oxidoreductase
BBJ33_RS03690	PF11486	Protein of unknown function (DUF3212)
BBJ33_RS03695	PF11181	Heat induced stress protein YflT
BBJ33_RS03700	PF00544	Pectate lyase
BBJ33_RS03705	PF00939	Sodium:sulfate symporter transmembrane region
BBJ33_RS03725	PF06580	Histidine kinase
BBJ33_RS03725	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS03730	PF00072	Response regulator receiver domain
BBJ33_RS03730	PF04397	LytTr DNA-binding domain
BBJ33_RS03740	PF04203	Sortase domain
BBJ33_RS03745	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS03745	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
BBJ33_RS03750	PF12431	Transcriptional regulator 
BBJ33_RS03750	PF00072	Response regulator receiver domain
BBJ33_RS03750	PF08279	HTH domain
BBJ33_RS03755	PF03401	Tripartite tricarboxylate transporter family receptor
BBJ33_RS03760	PF03600	Citrate transporter
BBJ33_RS03765	PF00753	Metallo-beta-lactamase superfamily
BBJ33_RS03770	PF02898	Nitric oxide synthase, oxygenase domain
BBJ33_RS03775	PF00708	Acylphosphatase
BBJ33_RS03780	PF03473	MOSC domain
BBJ33_RS03780	PF03475	3-alpha domain
BBJ33_RS03785	PF11121	Protein of unknown function (DUF2639)
BBJ33_RS03790	PF11588	Protein of unknown function (DUF3243)
BBJ33_RS03795	PF00557	Metallopeptidase family M24
BBJ33_RS03800	PF02378	Phosphotransferase system, EIIC 
BBJ33_RS03800	PF00367	phosphotransferase system, EIIB
BBJ33_RS03805	PF10787	Uncharacterised protein from bacillus cereus group
BBJ33_RS03810	PF00884	Sulfatase
BBJ33_RS03815	PF09350	Domain of unknown function (DUF1992)
BBJ33_RS03820	PF00011	Hsp20/alpha crystallin family
BBJ33_RS03825	PF10676	Spore germination protein gerPA/gerPF
BBJ33_RS03830	PF10676	Spore germination protein gerPA/gerPF
BBJ33_RS03835	PF00367	phosphotransferase system, EIIB
BBJ33_RS03835	PF02378	Phosphotransferase system, EIIC 
BBJ33_RS03840	PF00128	Alpha amylase, catalytic domain
BBJ33_RS03840	PF16657	Maltogenic Amylase, C-terminal domain
BBJ33_RS03845	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS03845	PF07702	UTRA domain
BBJ33_RS03850	PF00881	Nitroreductase family
BBJ33_RS03865	PF00149	Calcineurin-like phosphoesterase
BBJ33_RS03865	PF02872	5'-nucleotidase, C-terminal domain
BBJ33_RS03870	PF01965	DJ-1/PfpI family
BBJ33_RS03875	PF00356	Bacterial regulatory proteins, lacI family
BBJ33_RS03880	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
BBJ33_RS03880	PF08501	Shikimate dehydrogenase substrate binding domain
BBJ33_RS03885	PF01487	Type I 3-dehydroquinase
BBJ33_RS03890	PF07690	Major Facilitator Superfamily
BBJ33_RS03895	PF06569	Protein of unknown function (DUF1128)
BBJ33_RS03900	PF01451	Low molecular weight phosphotyrosine protein phosphatase
BBJ33_RS03910	PF03631	Virulence factor BrkB
BBJ33_RS03915	PF07690	Major Facilitator Superfamily
BBJ33_RS03920	PF01699	Sodium/calcium exchanger protein
BBJ33_RS03925	PF14167	YfkD-like protein
BBJ33_RS03930	PF00924	Mechanosensitive ion channel
BBJ33_RS03935	PF04055	Radical SAM superfamily
BBJ33_RS03935	PF08756	YfkB-like domain
BBJ33_RS03945	PF01522	Polysaccharide deacetylase
BBJ33_RS03950	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
BBJ33_RS03950	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BBJ33_RS03960	PF01544	CorA-like Mg2+ transporter protein
BBJ33_RS03965	PF00730	HhH-GPD superfamily base excision DNA repair protein
BBJ33_RS03970	PF05958	tRNA (Uracil-5-)-methyltransferase
BBJ33_RS03970	PF01938	TRAM domain
BBJ33_RS03975	PF14118	YfzA-like protein
BBJ33_RS03980	PF01207	Dihydrouridine synthase (Dus)
BBJ33_RS03990	PF00676	Dehydrogenase E1 component
BBJ33_RS03995	PF02780	Transketolase, C-terminal domain
BBJ33_RS03995	PF02779	Transketolase, pyrimidine binding domain
BBJ33_RS04000	PF00364	Biotin-requiring enzyme
BBJ33_RS04000	PF02817	e3 binding domain
BBJ33_RS04000	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BBJ33_RS04005	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BBJ33_RS04005	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BBJ33_RS04010	PF02954	Bacterial regulatory protein, Fis family
BBJ33_RS04010	PF00158	Sigma-54 interaction domain
BBJ33_RS04010	PF01590	GAF domain
BBJ33_RS04015	PF08141	Small acid-soluble spore protein H family
BBJ33_RS04020	PF11975	Family 4 glycosyl hydrolase C-terminal domain
BBJ33_RS04020	PF02056	Family 4 glycosyl hydrolase
BBJ33_RS04025	PF01380	SIS domain
BBJ33_RS04025	PF01418	Helix-turn-helix domain, rpiR family
BBJ33_RS04030	PF00367	phosphotransferase system, EIIB
BBJ33_RS04030	PF02378	Phosphotransferase system, EIIC 
BBJ33_RS04035	PF00005	ABC transporter
BBJ33_RS04035	PF00664	ABC transporter transmembrane region
BBJ33_RS04040	PF00005	ABC transporter
BBJ33_RS04040	PF00664	ABC transporter transmembrane region
BBJ33_RS04045	PF07681	DoxX
BBJ33_RS04050	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BBJ33_RS04060	PF03551	Transcriptional regulator PadR-like family
BBJ33_RS04060	PF10400	Virulence activator alpha C-term
BBJ33_RS04065	PF02525	Flavodoxin-like fold
BBJ33_RS04070	PF01757	Acyltransferase family
BBJ33_RS04075	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
BBJ33_RS04075	PF00391	PEP-utilising enzyme, mobile domain
BBJ33_RS04080	PF01337	Barstar (barnase inhibitor)
BBJ33_RS04085	PF12867	DinB superfamily
BBJ33_RS04090	PF07690	Major Facilitator Superfamily
BBJ33_RS04095	PF01047	MarR family
BBJ33_RS04100	PF09924	Uncharacterised conserved protein (DUF2156)
BBJ33_RS04100	PF03706	Lysylphosphatidylglycerol synthase TM region
BBJ33_RS04105	PF02567	Phenazine biosynthesis-like protein
BBJ33_RS04110	PF00881	Nitroreductase family
BBJ33_RS04115	PF14151	YfhD-like protein
BBJ33_RS04120	PF14152	YfhE-like protein
BBJ33_RS04125	PF01370	NAD dependent epimerase/dehydratase family
BBJ33_RS04125	PF08338	Domain of unknown function (DUF1731)
BBJ33_RS04130	PF02631	RecX family
BBJ33_RS04135	PF08838	Protein of unknown function (DUF1811)
BBJ33_RS04140	PF07690	Major Facilitator Superfamily
BBJ33_RS04145	PF10794	Protein of unknown function (DUF2606)
BBJ33_RS04150	PF00089	Trypsin
BBJ33_RS04155	PF08176	Small acid-soluble spore protein K family
BBJ33_RS04160	PF14043	WVELL protein
BBJ33_RS04165	PF08239	Bacterial SH3 domain
BBJ33_RS04170	PF13630	SdpI/YhfL protein family
BBJ33_RS04175	PF00561	alpha/beta hydrolase fold
BBJ33_RS04180	PF00535	Glycosyl transferase family 2
BBJ33_RS04185	PF09586	Bacterial membrane protein YfhO
BBJ33_RS04190	PF04307	LexA-binding, inner membrane-associated putative hydrolase
BBJ33_RS04195	PF14815	NUDIX domain
BBJ33_RS04195	PF00730	HhH-GPD superfamily base excision DNA repair protein
BBJ33_RS04210	PF04259	Small, acid-soluble spore protein, gamma-type 
BBJ33_RS04215	PF14182	YgaB-like protein
BBJ33_RS04220	PF04167	Protein of unknown function (DUF402)
BBJ33_RS04225	PF00664	ABC transporter transmembrane region
BBJ33_RS04225	PF00005	ABC transporter
BBJ33_RS04230	PF06081	Aromatic acid exporter family member 1
BBJ33_RS04235	PF00202	Aminotransferase class-III
BBJ33_RS04240	PF00578	AhpC/TSA family
BBJ33_RS04245	PF01475	Ferric uptake regulator family
BBJ33_RS04250	PF11023	Zinc-ribbon containing domain
BBJ33_RS04255	PF14540	Nucleotidyltransferase-like
BBJ33_RS04255	PF18576	Helix-turn-helix domain
BBJ33_RS04360	PF03575	Peptidase family S51
BBJ33_RS04365	PF13667	ThiC-associated domain 
BBJ33_RS04365	PF01964	Radical SAM ThiC family
BBJ33_RS04370	PF08031	Berberine and berberine like 
BBJ33_RS04370	PF01565	FAD binding domain 
BBJ33_RS04375	PF13040	Fur-regulated basic protein B
BBJ33_RS04380	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BBJ33_RS04385	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS04390	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS04390	PF12911	N-terminal TM domain of oligopeptide transport permease C
BBJ33_RS04395	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BBJ33_RS04395	PF00005	ABC transporter
BBJ33_RS04400	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BBJ33_RS04400	PF00005	ABC transporter
BBJ33_RS04405	PF06628	Catalase-related immune-responsive
BBJ33_RS04405	PF00199	Catalase
BBJ33_RS04415	PF00005	ABC transporter
BBJ33_RS04420	PF09084	NMT1/THI5 like
BBJ33_RS04425	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS04430	PF00296	Luciferase-like monooxygenase
BBJ33_RS04435	PF00253	Ribosomal protein S14p/S29e
BBJ33_RS04445	PF01381	Helix-turn-helix
BBJ33_RS04460	PF08331	Domain of unknown function (DUF1730)
BBJ33_RS04465	PF12671	Putative amidase domain
BBJ33_RS04470	PF00588	SpoU rRNA Methylase family
BBJ33_RS04475	PF13171	Protein of unknown function (DUF4004)
BBJ33_RS04480	PF04519	Polymer-forming cytoskeletal
BBJ33_RS04490	PF06798	PrkA serine protein kinase C-terminal domain
BBJ33_RS04490	PF08298	PrkA AAA domain
BBJ33_RS04495	PF04285	Protein of unknown function (DUF444)
BBJ33_RS04500	PF01047	MarR family
BBJ33_RS04510	PF07690	Major Facilitator Superfamily
BBJ33_RS04515	PF03358	NADPH-dependent FMN reductase
BBJ33_RS04530	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS04535	PF00005	ABC transporter
BBJ33_RS04540	PF00005	ABC transporter
BBJ33_RS04545	PF12679	ABC-2 family transporter protein
BBJ33_RS04550	PF00313	'Cold-shock' DNA-binding domain
BBJ33_RS04555	PF03180	NLPA lipoprotein
BBJ33_RS04560	PF07694	5TMR of 5TMR-LYT
BBJ33_RS04560	PF00990	Diguanylate cyclase, GGDEF domain
BBJ33_RS04565	PF00375	Sodium:dicarboxylate symporter family
BBJ33_RS04575	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
BBJ33_RS04585	PF07875	Coat F domain
BBJ33_RS04595	PF04203	Sortase domain
BBJ33_RS04600	PF01479	S4 domain
BBJ33_RS04600	PF00849	RNA pseudouridylate synthase
BBJ33_RS04605	PF17326	Family of unknown function (DUF5365)
BBJ33_RS04610	PF00571	CBS domain
BBJ33_RS04615	PF13419	Haloacid dehalogenase-like hydrolase
BBJ33_RS04620	PF00795	Carbon-nitrogen hydrolase
BBJ33_RS04620	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS04625	PF00202	Aminotransferase class-III
BBJ33_RS04630	PF04309	Glycerol-3-phosphate responsive antiterminator
BBJ33_RS04635	PF00230	Major intrinsic protein
BBJ33_RS04640	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BBJ33_RS04640	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BBJ33_RS04645	PF01266	FAD dependent oxidoreductase
BBJ33_RS04645	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
BBJ33_RS04650	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
BBJ33_RS04650	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
BBJ33_RS04650	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
BBJ33_RS04650	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
BBJ33_RS04655	PF07730	Histidine kinase
BBJ33_RS04655	PF13185	GAF domain
BBJ33_RS04660	PF00196	Bacterial regulatory proteins, luxR family
BBJ33_RS04660	PF00072	Response regulator receiver domain
BBJ33_RS04665	PF03358	NADPH-dependent FMN reductase
BBJ33_RS04670	PF14148	YhdB-like protein
BBJ33_RS04675	PF13028	Protein of unknown function (DUF3889)
BBJ33_RS04680	PF01476	LysM domain
BBJ33_RS04680	PF00877	NlpC/P60 family
BBJ33_RS04685	PF02082	Transcriptional regulator
BBJ33_RS04690	PF05552	Conserved TM helix
BBJ33_RS04695	PF04293	SpoVR like protein
BBJ33_RS04700	PF00245	Alkaline phosphatase
BBJ33_RS04705	PF01476	LysM domain
BBJ33_RS04705	PF00877	NlpC/P60 family
BBJ33_RS04710	PF03466	LysR substrate binding domain
BBJ33_RS04710	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BBJ33_RS04715	PF00285	Citrate synthase, C-terminal domain
BBJ33_RS04725	PF13520	Amino acid permease
BBJ33_RS04730	PF00209	Sodium:neurotransmitter symporter family
BBJ33_RS04735	PF17453	Sigma-M inhibitor
BBJ33_RS04740	PF13791	Sigma factor regulator C-terminal
BBJ33_RS04740	PF13800	Sigma factor regulator N-terminal
BBJ33_RS04745	PF08281	Sigma-70, region 4
BBJ33_RS04745	PF04542	Sigma-70 region 2 
BBJ33_RS04750	PF01553	Acyltransferase
BBJ33_RS04755	PF03471	Transporter associated domain
BBJ33_RS04755	PF00571	CBS domain
BBJ33_RS04755	PF01595	Cyclin M transmembrane N-terminal domain
BBJ33_RS04760	PF13411	MerR HTH family regulatory protein
BBJ33_RS04765	PF00155	Aminotransferase class I and II
BBJ33_RS04770	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS04770	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS04775	PF00571	CBS domain
BBJ33_RS04775	PF01595	Cyclin M transmembrane N-terminal domain
BBJ33_RS04775	PF03471	Transporter associated domain
BBJ33_RS04780	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
BBJ33_RS04785	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
BBJ33_RS04790	PF03009	Glycerophosphoryl diester phosphodiesterase family
BBJ33_RS04795	PF00924	Mechanosensitive ion channel
BBJ33_RS04800	PF02146	Sir2 family
BBJ33_RS04805	PF01522	Polysaccharide deacetylase
BBJ33_RS04810	PF01063	Amino-transferase class IV
BBJ33_RS04815	PF00440	Bacterial regulatory proteins, tetR family
BBJ33_RS04815	PF13977	BetI-type transcriptional repressor, C-terminal
BBJ33_RS04825	PF00582	Universal stress protein family
BBJ33_RS04830	PF00005	ABC transporter
BBJ33_RS04830	PF00664	ABC transporter transmembrane region
BBJ33_RS04835	PF00664	ABC transporter transmembrane region
BBJ33_RS04835	PF00005	ABC transporter
BBJ33_RS04840	PF13460	NAD(P)H-binding 
BBJ33_RS04845	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BBJ33_RS04850	PF17277	Family of unknown function (DUF5342)
BBJ33_RS04855	PF14398	YheC/D like ATP-grasp
BBJ33_RS04860	PF14398	YheC/D like ATP-grasp
BBJ33_RS04865	PF04286	Protein of unknown function (DUF445)
BBJ33_RS04870	PF06133	Control of competence regulator ComK, YlbF/YmcA
BBJ33_RS04875	PF08713	DNA alkylation repair enzyme
BBJ33_RS04885	PF04055	Radical SAM superfamily
BBJ33_RS04890	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
BBJ33_RS04895	PF00999	Sodium/hydrogen exchanger family
BBJ33_RS04900	PF02080	TrkA-C domain
BBJ33_RS04910	PF00378	Enoyl-CoA hydratase/isomerase
BBJ33_RS04915	PF14120	YhzD-like protein
BBJ33_RS04920	PF13732	Domain of unknown function (DUF4162)
BBJ33_RS04920	PF00005	ABC transporter
BBJ33_RS04930	PF00149	Calcineurin-like phosphoesterase
BBJ33_RS04935	PF13514	AAA domain
BBJ33_RS04940	PF01966	HD domain
BBJ33_RS04945	PF14147	Sporulation protein YhaL
BBJ33_RS04955	PF09680	Family of unknown function
BBJ33_RS04965	PF11667	Putative zincin peptidase
BBJ33_RS04975	PF08963	Protein of unknown function (DUF1878)
BBJ33_RS04980	PF01047	MarR family
BBJ33_RS04985	PF12732	YtxH-like protein
BBJ33_RS04995	PF17099	Tryptophan transporter TrpP
BBJ33_RS05000	PF00266	Aminotransferase class-V
BBJ33_RS05005	PF01230	HIT domain
BBJ33_RS05010	PF00005	ABC transporter
BBJ33_RS05015	PF05975	Bacterial ABC transporter protein EcsB
BBJ33_RS05020	PF12787	EcsC protein family
BBJ33_RS05025	PF01546	Peptidase family M20/M25/M40
BBJ33_RS05025	PF07687	Peptidase dimerisation domain
BBJ33_RS05035	PF03992	Antibiotic biosynthesis monooxygenase
BBJ33_RS05040	PF00905	Penicillin binding protein transpeptidase domain
BBJ33_RS05040	PF00912	Transglycosylase
BBJ33_RS05045	PF01208	Uroporphyrinogen decarboxylase (URO-D)
BBJ33_RS05050	PF00762	Ferrochelatase
BBJ33_RS05055	PF01593	Flavin containing amine oxidoreductase
BBJ33_RS05060	PF00440	Bacterial regulatory proteins, tetR family
BBJ33_RS05060	PF17932	Tetracyclin repressor-like, C-terminal domain
BBJ33_RS05070	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
BBJ33_RS05070	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
BBJ33_RS05080	PF05343	M42 glutamyl aminopeptidase
BBJ33_RS05085	PF00375	Sodium:dicarboxylate symporter family
BBJ33_RS05090	PF14149	YhfH-like protein
BBJ33_RS05095	PF12706	Beta-lactamase superfamily domain
BBJ33_RS05100	PF03099	Biotin/lipoate A/B protein ligase family
BBJ33_RS05100	PF10437	Bacterial lipoate protein ligase C-terminus
BBJ33_RS05105	PF13460	NAD(P)H-binding 
BBJ33_RS05110	PF00501	AMP-binding enzyme
BBJ33_RS05110	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS05120	PF16491	CAAX prenyl protease N-terminal, five membrane helices
BBJ33_RS05120	PF01435	Peptidase family M48
BBJ33_RS05125	PF05922	Peptidase inhibitor I9
BBJ33_RS05125	PF00082	Subtilase family
BBJ33_RS05135	PF01497	Periplasmic binding protein
BBJ33_RS05140	PF00300	Histidine phosphatase superfamily (branch 1)
BBJ33_RS05145	PF00108	Thiolase, N-terminal domain
BBJ33_RS05145	PF02803	Thiolase, C-terminal domain
BBJ33_RS05150	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS05150	PF00501	AMP-binding enzyme
BBJ33_RS05155	PF02632	BioY family
BBJ33_RS05160	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BBJ33_RS05165	PF00355	Rieske [2Fe-2S] domain
BBJ33_RS05165	PF01266	FAD dependent oxidoreductase
BBJ33_RS05175	PF08858	IDEAL domain
BBJ33_RS05180	PF06338	ComK protein
BBJ33_RS05190	PF08818	Domain of unknown function (DU1801)
BBJ33_RS05195	PF15493	Domain of unknown function, YrpD
BBJ33_RS05200	PF05901	Excalibur calcium-binding domain
BBJ33_RS05205	PF01906	Putative heavy-metal-binding
BBJ33_RS05210	PF00474	Sodium:solute symporter family
BBJ33_RS05215	PF11755	Protein of unknown function (DUF3311)
BBJ33_RS05225	PF09335	SNARE associated Golgi protein
BBJ33_RS05230	PF10502	Signal peptidase, peptidase S26 
BBJ33_RS05235	PF01494	FAD binding domain
BBJ33_RS05240	PF01047	MarR family
BBJ33_RS05245	PF05145	Transition state regulatory protein AbrB
BBJ33_RS05250	PF07690	Major Facilitator Superfamily
BBJ33_RS05255	PF00440	Bacterial regulatory proteins, tetR family
BBJ33_RS05255	PF08361	MAATS-type transcriptional repressor, C-terminal region
BBJ33_RS05260	PF02915	Rubrerythrin
BBJ33_RS05265	PF04239	Protein of unknown function (DUF421)
BBJ33_RS05270	PF12705	PD-(D/E)XK nuclease superfamily
BBJ33_RS05270	PF13361	UvrD-like helicase C-terminal domain
BBJ33_RS05275	PF13361	UvrD-like helicase C-terminal domain
BBJ33_RS05275	PF00580	UvrD/REP helicase N-terminal domain
BBJ33_RS05275	PF12705	PD-(D/E)XK nuclease superfamily
BBJ33_RS05280	PF00149	Calcineurin-like phosphoesterase
BBJ33_RS05280	PF12320	Type 5 capsule protein repressor C-terminal domain
BBJ33_RS05285	PF13476	AAA domain
BBJ33_RS05295	PF10676	Spore germination protein gerPA/gerPF
BBJ33_RS05300	PF10970	Spore germination protein GerPE 
BBJ33_RS05310	PF10737	Spore germination protein GerPC
BBJ33_RS05315	PF10803	Spore germination GerPB
BBJ33_RS05320	PF10676	Spore germination protein gerPA/gerPF
BBJ33_RS05325	PF09388	Spo0E like sporulation regulatory protein
BBJ33_RS05330	PF01557	Fumarylacetoacetate (FAA) hydrolase family
BBJ33_RS05335	PF07457	Protein of unknown function (DUF1516)
BBJ33_RS05345	PF10949	Protein of unknown function (DUF2777)
BBJ33_RS05350	PF13537	Glutamine amidotransferase domain
BBJ33_RS05350	PF00733	Asparagine synthase
BBJ33_RS05360	PF01554	MatE
BBJ33_RS05365	PF02311	AraC-like ligand binding domain
BBJ33_RS05365	PF12833	Helix-turn-helix domain
BBJ33_RS05370	PF00356	Bacterial regulatory proteins, lacI family
BBJ33_RS05375	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BBJ33_RS05375	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BBJ33_RS05380	PF05163	DinB family
BBJ33_RS05385	PF13599	Pentapeptide repeats (9 copies)
BBJ33_RS05390	PF13673	Acetyltransferase (GNAT) domain
BBJ33_RS05395	PF02219	Methylenetetrahydrofolate reductase
BBJ33_RS05395	PF02574	Homocysteine S-methyltransferase
BBJ33_RS05400	PF04461	Protein of unknown function (DUF520)
BBJ33_RS05405	PF17783	CvfB-like winged helix domain
BBJ33_RS05405	PF13509	S1 domain
BBJ33_RS05410	PF02608	ABC transporter substrate-binding protein PnrA-like
BBJ33_RS05415	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BBJ33_RS05415	PF12729	Four helix bundle sensory module for signal transduction
BBJ33_RS05415	PF00672	HAMP domain
BBJ33_RS05420	PF02645	Uncharacterised protein, DegV family COG1307
BBJ33_RS05425	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BBJ33_RS05425	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BBJ33_RS05430	PF12690	Intracellular proteinase inhibitor
BBJ33_RS05435	PF12758	Protein of unknown function (DUF3813)
BBJ33_RS05445	PF00326	Prolyl oligopeptidase family
BBJ33_RS05450	PF01883	Iron-sulfur cluster assembly protein
BBJ33_RS05455	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BBJ33_RS05460	PF01565	FAD binding domain 
BBJ33_RS05465	PF07690	Major Facilitator Superfamily
BBJ33_RS05470	PF01118	Semialdehyde dehydrogenase, NAD binding domain
BBJ33_RS05470	PF02774	Semialdehyde dehydrogenase, dimerisation domain
BBJ33_RS05475	PF01960	ArgJ family
BBJ33_RS05480	PF00696	Amino acid kinase family
BBJ33_RS05485	PF00202	Aminotransferase class-III
BBJ33_RS05490	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
BBJ33_RS05490	PF00117	Glutamine amidotransferase class-I
BBJ33_RS05495	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BBJ33_RS05495	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BBJ33_RS05500	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
BBJ33_RS05500	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
BBJ33_RS05505	PF14168	YjzC-like protein
BBJ33_RS05510	PF11151	Protein of unknown function (DUF2929)
BBJ33_RS05530	PF02608	ABC transporter substrate-binding protein PnrA-like
BBJ33_RS05535	PF10815	ComZ
BBJ33_RS05545	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
BBJ33_RS05545	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
BBJ33_RS05550	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS05550	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS05555	PF10026	Predicted Zn-dependent protease (DUF2268)
BBJ33_RS05560	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BBJ33_RS05560	PF00005	ABC transporter
BBJ33_RS05565	PF00005	ABC transporter
BBJ33_RS05565	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BBJ33_RS05570	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BBJ33_RS05575	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS05580	PF12911	N-terminal TM domain of oligopeptide transport permease C
BBJ33_RS05580	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS05585	PF12227	Protein of unknown function (DUF3603)
BBJ33_RS05590	PF00579	tRNA synthetases class I (W and Y)
BBJ33_RS05595	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BBJ33_RS05600	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS05605	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS05605	PF12911	N-terminal TM domain of oligopeptide transport permease C
BBJ33_RS05610	PF00005	ABC transporter
BBJ33_RS05610	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BBJ33_RS05615	PF00005	ABC transporter
BBJ33_RS05615	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BBJ33_RS05625	PF13508	Acetyltransferase (GNAT) domain
BBJ33_RS05630	PF03960	ArsC family
BBJ33_RS05635	PF03741	Integral membrane protein TerC family
BBJ33_RS05640	PF05389	Negative regulator of genetic competence (MecA)
BBJ33_RS05645	PF06054	Competence protein CoiA-like family
BBJ33_RS05650	PF01432	Peptidase family M3
BBJ33_RS05650	PF08439	Oligopeptidase F
BBJ33_RS05660	PF01152	Bacterial-like globin
BBJ33_RS05665	PF01464	Transglycosylase SLT domain
BBJ33_RS05670	PF01928	CYTH domain
BBJ33_RS05680	PF04607	Region found in RelA / SpoT proteins
BBJ33_RS05685	PF01513	ATP-NAD kinase
BBJ33_RS05690	PF00849	RNA pseudouridylate synthase
BBJ33_RS05695	PF00149	Calcineurin-like phosphoesterase
BBJ33_RS05700	PF00999	Sodium/hydrogen exchanger family
BBJ33_RS05700	PF02254	TrkA-N domain
BBJ33_RS05700	PF02080	TrkA-C domain
BBJ33_RS05705	PF03070	TENA/THI-4/PQQC family
BBJ33_RS05710	PF02581	Thiamine monophosphate synthase
BBJ33_RS05715	PF01266	FAD dependent oxidoreductase
BBJ33_RS05720	PF02597	ThiS family
BBJ33_RS05725	PF05690	Thiazole biosynthesis protein ThiG
BBJ33_RS05730	PF00899	ThiF family
BBJ33_RS05735	PF08543	Phosphomethylpyrimidine kinase
BBJ33_RS05745	PF14153	Spore coat protein CotO
BBJ33_RS05750	PF10612	Spore coat protein Z
BBJ33_RS05755	PF10612	Spore coat protein Z
BBJ33_RS05760	PF07552	Spore Coat Protein X and V domain
BBJ33_RS05770	PF07552	Spore Coat Protein X and V domain
BBJ33_RS05775	PF07098	Protein of unknown function (DUF1360)
BBJ33_RS05790	PF14069	Stage VI sporulation protein F
BBJ33_RS05795	PF13361	UvrD-like helicase C-terminal domain
BBJ33_RS05795	PF00580	UvrD/REP helicase N-terminal domain
BBJ33_RS05805	PF00753	Metallo-beta-lactamase superfamily
BBJ33_RS05815	PF00005	ABC transporter
BBJ33_RS05825	PF13673	Acetyltransferase (GNAT) domain
BBJ33_RS05835	PF00756	Putative esterase
BBJ33_RS05840	PF01053	Cys/Met metabolism PLP-dependent enzyme
BBJ33_RS05845	PF01053	Cys/Met metabolism PLP-dependent enzyme
BBJ33_RS05855	PF00589	Phage integrase family
BBJ33_RS05855	PF02899	Phage integrase, N-terminal SAM-like domain
BBJ33_RS05895	PF01695	IstB-like ATP binding protein
BBJ33_RS05895	PF07319	Primosomal protein DnaI N-terminus
BBJ33_RS05920	PF13443	Cro/C1-type HTH DNA-binding domain
BBJ33_RS05970	PF01367	5'-3' exonuclease, C-terminal SAM fold
BBJ33_RS05970	PF00476	DNA polymerase family A
BBJ33_RS05970	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
BBJ33_RS05970	PF01612	3'-5' exonuclease
BBJ33_RS06005	PF07972	NrdI Flavodoxin like 
BBJ33_RS06010	PF00317	Ribonucleotide reductase, all-alpha domain
BBJ33_RS06010	PF08343	Ribonucleotide reductase N-terminal
BBJ33_RS06010	PF02867	Ribonucleotide reductase, barrel domain
BBJ33_RS06020	PF00317	Ribonucleotide reductase, all-alpha domain
BBJ33_RS06020	PF02867	Ribonucleotide reductase, barrel domain
BBJ33_RS06020	PF08343	Ribonucleotide reductase N-terminal
BBJ33_RS06030	PF00268	Ribonucleotide reductase, small chain
BBJ33_RS06035	PF00692	dUTPase
BBJ33_RS06050	PF02511	Thymidylate synthase complementing protein
BBJ33_RS06055	PF01476	LysM domain
BBJ33_RS06055	PF06725	3D domain
BBJ33_RS06080	PF07669	Eco57I restriction-modification methylase
BBJ33_RS06080	PF12950	TaqI-like C-terminal specificity domain
BBJ33_RS06085	PF04542	Sigma-70 region 2 
BBJ33_RS06085	PF04545	Sigma-70, region 4
BBJ33_RS06115	PF13229	Right handed beta helix region
BBJ33_RS06120	PF05908	Poly-gamma-glutamate hydrolase
BBJ33_RS06130	PF00535	Glycosyl transferase family 2
BBJ33_RS06150	PF00589	Phage integrase family
BBJ33_RS06235	PF13457	GW (Gly-Tryp) dipeptide domain
BBJ33_RS06235	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
BBJ33_RS06245	PF12708	Pectate lyase superfamily protein
BBJ33_RS06245	PF11962	Peptidase_G2, IMC autoproteolytic cleavage domain
BBJ33_RS06265	PF10960	BhlA holin family
BBJ33_RS06270	PF01476	LysM domain
BBJ33_RS06270	PF01471	Putative peptidoglycan binding domain
BBJ33_RS06270	PF01510	N-acetylmuramoyl-L-alanine amidase
BBJ33_RS06285	PF08863	YolD-like protein
BBJ33_RS06310	PF04740	LXG domain of WXG superfamily
BBJ33_RS06310	PF14411	A nuclease of the HNH/ENDO VII superfamily with conserved LHH
BBJ33_RS06320	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BBJ33_RS06330	PF03992	Antibiotic biosynthesis monooxygenase
BBJ33_RS06335	PF07690	Major Facilitator Superfamily
BBJ33_RS06340	PF01047	MarR family
BBJ33_RS06345	PF07745	Glycosyl hydrolase family 53
BBJ33_RS06350	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
BBJ33_RS06350	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
BBJ33_RS06355	PF16363	GDP-mannose 4,6 dehydratase
BBJ33_RS06360	PF00288	GHMP kinases N terminal domain
BBJ33_RS06360	PF10509	Galactokinase galactose-binding signature
BBJ33_RS06360	PF08544	GHMP kinases C terminal 
BBJ33_RS06365	PF02378	Phosphotransferase system, EIIC 
BBJ33_RS06365	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BBJ33_RS06370	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
BBJ33_RS06375	PF00232	Glycosyl hydrolase family 1
BBJ33_RS06380	PF08220	DeoR-like helix-turn-helix domain
BBJ33_RS06380	PF00455	DeoR C terminal sensor domain
BBJ33_RS06395	PF02308	MgtC family
BBJ33_RS06405	PF14070	Putative motility protein
BBJ33_RS06410	PF10990	Protein of unknown function (DUF2809)
BBJ33_RS06415	PF14172	Domain of unknown function (DUF4309)
BBJ33_RS06420	PF00384	Molybdopterin oxidoreductase
BBJ33_RS06420	PF01568	Molydopterin dinucleotide binding domain
BBJ33_RS06420	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BBJ33_RS06420	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
BBJ33_RS06420	PF12838	4Fe-4S dicluster domain
BBJ33_RS06425	PF07849	Protein of unknown function (DUF1641)
BBJ33_RS06430	PF00067	Cytochrome P450
BBJ33_RS06435	PF04101	Glycosyltransferase family 28 C-terminal domain
BBJ33_RS06445	PF02602	Uroporphyrinogen-III synthase HemD
BBJ33_RS06450	PF03649	Uncharacterised protein family (UPF0014)
BBJ33_RS06455	PF00005	ABC transporter
BBJ33_RS06460	PF13536	Putative multidrug resistance efflux transporter
BBJ33_RS06470	PF07849	Protein of unknown function (DUF1641)
BBJ33_RS06475	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BBJ33_RS06480	PF02614	Glucuronate isomerase
BBJ33_RS06490	PF00356	Bacterial regulatory proteins, lacI family
BBJ33_RS06495	PF08125	Mannitol dehydrogenase C-terminal domain
BBJ33_RS06495	PF01232	Mannitol dehydrogenase Rossmann domain
BBJ33_RS06500	PF04295	D-galactarate dehydratase / Altronate hydrolase, C terminus
BBJ33_RS06500	PF08666	SAF domain
BBJ33_RS06505	PF00486	Transcriptional regulatory protein, C terminal
BBJ33_RS06505	PF00072	Response regulator receiver domain
BBJ33_RS06510	PF00672	HAMP domain
BBJ33_RS06510	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS06510	PF00512	His Kinase A (phospho-acceptor) domain
BBJ33_RS06515	PF00005	ABC transporter
BBJ33_RS06530	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS06530	PF07730	Histidine kinase
BBJ33_RS06535	PF00072	Response regulator receiver domain
BBJ33_RS06535	PF00196	Bacterial regulatory proteins, luxR family
BBJ33_RS06550	PF00005	ABC transporter
BBJ33_RS06550	PF00664	ABC transporter transmembrane region
BBJ33_RS06550	PF03412	Peptidase C39 family
BBJ33_RS06555	PF05147	Lanthionine synthetase C-like protein
BBJ33_RS06555	PF13575	Domain of unknown function (DUF4135)
BBJ33_RS06560	PF01925	Sulfite exporter TauE/SafE
BBJ33_RS06565	PF05163	DinB family
BBJ33_RS06570	PF18801	response regulator aspartate phosphatase H, N terminal
BBJ33_RS06575	PF01510	N-acetylmuramoyl-L-alanine amidase
BBJ33_RS06575	PF01476	LysM domain
BBJ33_RS06575	PF01471	Putative peptidoglycan binding domain
BBJ33_RS06580	PF08000	Bacterial PH domain
BBJ33_RS06585	PF05908	Poly-gamma-glutamate hydrolase
BBJ33_RS06590	PF06114	IrrE N-terminal-like domain
BBJ33_RS06595	PF01381	Helix-turn-helix
BBJ33_RS06610	PF01695	IstB-like ATP binding protein
BBJ33_RS06620	PF17356	Phage-like element PBSX protein XtrA
BBJ33_RS06625	PF08281	Sigma-70, region 4
BBJ33_RS06630	PF10668	Phage terminase small subunit
BBJ33_RS06630	PF03592	Terminase small subunit 
BBJ33_RS06635	PF04466	Phage terminase large subunit
BBJ33_RS06635	PF17288	Terminase RNAseH like domain
BBJ33_RS06640	PF04860	Phage portal protein
BBJ33_RS06645	PF14550	Putative phage serine protease XkdF
BBJ33_RS06650	PF05065	Phage capsid family 
BBJ33_RS06655	PF11436	Protein of unknown function (DUF3199)
BBJ33_RS06660	PF12206	Domain of unknown function (DUF3599)
BBJ33_RS06665	PF04883	Bacteriophage HK97-gp10, putative tail-component
BBJ33_RS06680	PF17482	Phage tail sheath C-terminal domain
BBJ33_RS06680	PF04984	Phage tail sheath protein subtilisin-like domain
BBJ33_RS06680	PF17481	Phage tail sheath protein beta-sandwich domain
BBJ33_RS06685	PF09393	Phage tail tube protein
BBJ33_RS06690	PF08890	Phage XkdN-like tail assembly chaperone protein, TAC
BBJ33_RS06695	PF01464	Transglycosylase SLT domain
BBJ33_RS06695	PF01464	Transglycosylase SLT domain
BBJ33_RS06695	PF01464	Transglycosylase SLT domain
BBJ33_RS06700	PF01476	LysM domain
BBJ33_RS06710	PF10844	Protein of unknown function (DUF2577)
BBJ33_RS06715	PF10934	Protein of unknown function (DUF2634)
BBJ33_RS06720	PF04865	Baseplate J-like protein
BBJ33_RS06725	PF10076	Uncharacterised protein conserved in bacteria (DUF2313)
BBJ33_RS06745	PF09693	Phage uncharacterised protein (Phage_XkdX)
BBJ33_RS06755	PF10779	Haemolysin XhlA
BBJ33_RS06760	PF04688	SPP1 phage holin
BBJ33_RS06765	PF01510	N-acetylmuramoyl-L-alanine amidase
BBJ33_RS06765	PF01476	LysM domain
BBJ33_RS06765	PF01471	Putative peptidoglycan binding domain
BBJ33_RS06770	PF14185	Antitoxin SpoIISB, type II toxin-antitoxin system 
BBJ33_RS06775	PF14171	Toxin SpoIISA, type II toxin-antitoxin system
BBJ33_RS06780	PF01384	Phosphate transporter family
BBJ33_RS06785	PF01865	Protein of unknown function DUF47
BBJ33_RS06790	PF13520	Amino acid permease
BBJ33_RS06795	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BBJ33_RS06800	PF13231	Dolichyl-phosphate-mannose-protein mannosyltransferase
BBJ33_RS06805	PF00535	Glycosyl transferase family 2
BBJ33_RS06810	PF13180	PDZ domain
BBJ33_RS06815	PF07690	Major Facilitator Superfamily
BBJ33_RS06820	PF04951	D-aminopeptidase
BBJ33_RS06825	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS06830	PF12911	N-terminal TM domain of oligopeptide transport permease C
BBJ33_RS06830	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS06835	PF00005	ABC transporter
BBJ33_RS06835	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BBJ33_RS06840	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BBJ33_RS06845	PF17676	LD-carboxypeptidase C-terminal domain
BBJ33_RS06845	PF02016	LD-carboxypeptidase N-terminal domain
BBJ33_RS06850	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
BBJ33_RS06850	PF13378	Enolase C-terminal domain-like
BBJ33_RS06855	PF00877	NlpC/P60 family
BBJ33_RS06860	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BBJ33_RS06860	PF00005	ABC transporter
BBJ33_RS06865	PF10282	Lactonase, 7-bladed beta-propeller
BBJ33_RS06875	PF03061	Thioesterase superfamily
BBJ33_RS06880	PF13302	Acetyltransferase (GNAT) domain
BBJ33_RS06885	PF00893	Small Multidrug Resistance protein
BBJ33_RS06890	PF00893	Small Multidrug Resistance protein
BBJ33_RS06895	PF00551	Formyl transferase
BBJ33_RS06895	PF01842	ACT domain
BBJ33_RS06900	PF00696	Amino acid kinase family
BBJ33_RS06900	PF01472	PUA domain
BBJ33_RS06905	PF00171	Aldehyde dehydrogenase family
BBJ33_RS06910	PF02566	OsmC-like protein
BBJ33_RS06915	PF01047	MarR family
BBJ33_RS06920	PF02566	OsmC-like protein
BBJ33_RS06935	PF00535	Glycosyl transferase family 2
BBJ33_RS06935	PF13181	Tetratricopeptide repeat
BBJ33_RS06945	PF12832	MFS_1 like family
BBJ33_RS06950	PF00027	Cyclic nucleotide-binding domain
BBJ33_RS06955	PF08267	Cobalamin-independent synthase, N-terminal domain
BBJ33_RS06955	PF01717	Cobalamin-independent synthase, Catalytic domain
BBJ33_RS06960	PF00082	Subtilase family
BBJ33_RS06965	PF01740	STAS domain
BBJ33_RS06970	PF02361	Cobalt transport protein
BBJ33_RS06975	PF00005	ABC transporter
BBJ33_RS06980	PF09819	ABC-type cobalt transport system, permease component
BBJ33_RS06985	PF01476	LysM domain
BBJ33_RS06985	PF00704	Glycosyl hydrolases family 18
BBJ33_RS06990	PF01769	Divalent cation transporter
BBJ33_RS06990	PF03448	MgtE intracellular N domain
BBJ33_RS06990	PF00571	CBS domain
BBJ33_RS06995	PF13411	MerR HTH family regulatory protein
BBJ33_RS07005	PF01047	MarR family
BBJ33_RS07015	PF01068	ATP dependent DNA ligase domain
BBJ33_RS07020	PF02735	Ku70/Ku80 beta-barrel domain
BBJ33_RS07030	PF09335	SNARE associated Golgi protein
BBJ33_RS07035	PF03741	Integral membrane protein TerC family
BBJ33_RS07040	PF04542	Sigma-70 region 2 
BBJ33_RS07045	PF12791	Anti-sigma factor N-terminus
BBJ33_RS07050	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BBJ33_RS07055	PF08876	Domain of unknown function (DUF1836)
BBJ33_RS07060	PF01435	Peptidase family M48
BBJ33_RS07065	PF02386	Cation transport protein
BBJ33_RS07070	PF04239	Protein of unknown function (DUF421)
BBJ33_RS07075	PF01757	Acyltransferase family
BBJ33_RS07080	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS07080	PF13188	PAS domain
BBJ33_RS07080	PF13426	PAS domain
BBJ33_RS07080	PF00989	PAS fold
BBJ33_RS07080	PF00512	His Kinase A (phospho-acceptor) domain
BBJ33_RS07085	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
BBJ33_RS07085	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
BBJ33_RS07090	PF01008	Initiation factor 2 subunit family
BBJ33_RS07095	PF01636	Phosphotransferase enzyme family
BBJ33_RS07100	PF00795	Carbon-nitrogen hydrolase
BBJ33_RS07105	PF00155	Aminotransferase class I and II
BBJ33_RS07110	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
BBJ33_RS07110	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
BBJ33_RS07120	PF00596	Class II Aldolase and Adducin N-terminal domain
BBJ33_RS07125	PF03079	ARD/ARD' family
BBJ33_RS07130	PF09388	Spo0E like sporulation regulatory protein
BBJ33_RS07135	PF00512	His Kinase A (phospho-acceptor) domain
BBJ33_RS07135	PF02743	Cache domain
BBJ33_RS07135	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS07140	PF01047	MarR family
BBJ33_RS07145	PF00691	OmpA family
BBJ33_RS07145	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
BBJ33_RS07150	PF01618	MotA/TolQ/ExbB proton channel family
BBJ33_RS07155	PF07724	AAA domain (Cdc48 subfamily)
BBJ33_RS07155	PF10431	C-terminal, D2-small domain, of ClpB protein 
BBJ33_RS07155	PF17871	AAA lid domain
BBJ33_RS07155	PF00004	ATPase family associated with various cellular activities (AAA)
BBJ33_RS07170	PF06508	Queuosine biosynthesis protein QueC
BBJ33_RS07175	PF01242	6-pyruvoyl tetrahydropterin synthase
BBJ33_RS07180	PF04055	Radical SAM superfamily
BBJ33_RS07185	PF14489	QueF-like protein
BBJ33_RS07190	PF01638	HxlR-like helix-turn-helix
BBJ33_RS07200	PF14489	QueF-like protein
BBJ33_RS07205	PF17191	RecG wedge domain
BBJ33_RS07205	PF13749	Putative ATP-dependent DNA helicase recG C-terminal
BBJ33_RS07205	PF00270	DEAD/DEAH box helicase
BBJ33_RS07210	PF11514	Protein of unknown function (DUF3219)
BBJ33_RS07215	PF09953	Uncharacterized protein conserved in bacteria (DUF2187)
BBJ33_RS07225	PF07486	Cell Wall Hydrolase
BBJ33_RS07230	PF01943	Polysaccharide biosynthesis protein
BBJ33_RS07235	PF00578	AhpC/TSA family
BBJ33_RS07245	PF00557	Metallopeptidase family M24
BBJ33_RS07245	PF01321	Creatinase/Prolidase N-terminal domain
BBJ33_RS07250	PF00356	Bacterial regulatory proteins, lacI family
BBJ33_RS07250	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
BBJ33_RS07255	PF03123	CAT RNA binding domain
BBJ33_RS07255	PF00874	PRD domain
BBJ33_RS07260	PF02378	Phosphotransferase system, EIIC 
BBJ33_RS07260	PF00367	phosphotransferase system, EIIB
BBJ33_RS07260	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BBJ33_RS07265	PF00381	PTS HPr component phosphorylation site
BBJ33_RS07270	PF00391	PEP-utilising enzyme, mobile domain
BBJ33_RS07270	PF02896	PEP-utilising enzyme, TIM barrel domain
BBJ33_RS07270	PF05524	PEP-utilising enzyme, N-terminal
BBJ33_RS07275	PF11132	Transcriptional regulator protein (SplA)
BBJ33_RS07285	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BBJ33_RS07285	PF00672	HAMP domain
BBJ33_RS07285	PF02743	Cache domain
BBJ33_RS07290	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
BBJ33_RS07290	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BBJ33_RS07295	PF00188	Cysteine-rich secretory protein family
BBJ33_RS07300	PF03717	Penicillin-binding Protein dimerisation domain
BBJ33_RS07300	PF00905	Penicillin binding protein transpeptidase domain
BBJ33_RS07305	PF08447	PAS fold
BBJ33_RS07305	PF00989	PAS fold
BBJ33_RS07305	PF00512	His Kinase A (phospho-acceptor) domain
BBJ33_RS07305	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS07310	PF00155	Aminotransferase class I and II
BBJ33_RS07315	PF00072	Response regulator receiver domain
BBJ33_RS07315	PF01584	CheW-like domain
BBJ33_RS07320	PF14177	YkyB-like protein
BBJ33_RS07325	PF07690	Major Facilitator Superfamily
BBJ33_RS07330	PF01476	LysM domain
BBJ33_RS07330	PF03734	L,D-transpeptidase catalytic domain
BBJ33_RS07335	PF10518	TAT (twin-arginine translocation) pathway signal sequence
BBJ33_RS07335	PF00149	Calcineurin-like phosphoesterase
BBJ33_RS07350	PF10388	EAL-domain associated signalling protein domain
BBJ33_RS07350	PF00563	EAL domain
BBJ33_RS07355	PF08796	Protein of unknown function (DUF1797)
BBJ33_RS07360	PF04308	Ribonuclease H-like
BBJ33_RS07365	PF14156	Antirepressor AbbA
BBJ33_RS07375	PF03466	LysR substrate binding domain
BBJ33_RS07375	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BBJ33_RS07380	PF00258	Flavodoxin
BBJ33_RS07390	PF00258	Flavodoxin
BBJ33_RS07395	PF08503	Tetrahydrodipicolinate succinyltransferase N-terminal
BBJ33_RS07395	PF14602	Hexapeptide repeat of succinyl-transferase
BBJ33_RS07395	PF00132	Bacterial transferase hexapeptide (six repeats)
BBJ33_RS07400	PF07687	Peptidase dimerisation domain
BBJ33_RS07400	PF01546	Peptidase family M20/M25/M40
BBJ33_RS07405	PF03698	Uncharacterised protein family (UPF0180)
BBJ33_RS07410	PF00924	Mechanosensitive ion channel
BBJ33_RS07415	PF00578	AhpC/TSA family
BBJ33_RS07430	PF12804	MobA-like NTP transferase domain
BBJ33_RS07435	PF00899	ThiF family
BBJ33_RS07440	PF03454	MoeA C-terminal region (domain IV)
BBJ33_RS07440	PF03453	MoeA N-terminal region (domain I and II)
BBJ33_RS07440	PF00994	Probable molybdopterin binding domain
BBJ33_RS07445	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
BBJ33_RS07450	PF02391	MoaE protein
BBJ33_RS07455	PF02597	ThiS family
BBJ33_RS07460	PF04893	Yip1 domain
BBJ33_RS07465	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
BBJ33_RS07470	PF00005	ABC transporter
BBJ33_RS07475	PF02687	FtsX-like permease family
BBJ33_RS07475	PF12704	MacB-like periplasmic core domain
BBJ33_RS07480	PF00455	DeoR C terminal sensor domain
BBJ33_RS07480	PF08220	DeoR-like helix-turn-helix domain
BBJ33_RS07485	PF00294	pfkB family carbohydrate kinase
BBJ33_RS07490	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BBJ33_RS07490	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BBJ33_RS07495	PF10502	Signal peptidase, peptidase S26 
BBJ33_RS07505	PF00005	ABC transporter
BBJ33_RS07505	PF12848	ABC transporter
BBJ33_RS07510	PF02558	Ketopantoate reductase PanE/ApbA
BBJ33_RS07510	PF08546	Ketopantoate reductase PanE/ApbA C terminal
BBJ33_RS07515	PF02073	Thermophilic metalloprotease (M29)
BBJ33_RS07530	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
BBJ33_RS07530	PF18277	AbrB C-terminal domain
BBJ33_RS07535	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS07535	PF00512	His Kinase A (phospho-acceptor) domain
BBJ33_RS07535	PF00989	PAS fold
BBJ33_RS07540	PF06094	Gamma-glutamyl cyclotransferase, AIG2-like
BBJ33_RS07545	PF02080	TrkA-C domain
BBJ33_RS07545	PF02254	TrkA-N domain
BBJ33_RS07550	PF13382	Adenine deaminase C-terminal domain
BBJ33_RS07550	PF01979	Amidohydrolase family
BBJ33_RS07555	PF00753	Metallo-beta-lactamase superfamily
BBJ33_RS07555	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
BBJ33_RS07555	PF17770	Ribonuclease J C-terminal domain
BBJ33_RS07560	PF07288	Protein of unknown function (DUF1447)
BBJ33_RS07570	PF01327	Polypeptide deformylase
BBJ33_RS07580	PF10368	Putative cell-wall binding lipoprotein
BBJ33_RS07585	PF00698	Acyl transferase domain
BBJ33_RS07590	PF00668	Condensation domain
BBJ33_RS07590	PF14765	Polyketide synthase dehydratase
BBJ33_RS07590	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS07590	PF00550	Phosphopantetheine attachment site
BBJ33_RS07590	PF00501	AMP-binding enzyme
BBJ33_RS07590	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS07590	PF08659	KR domain
BBJ33_RS07590	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS07590	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS07595	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS07595	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS07595	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS07595	PF08659	KR domain
BBJ33_RS07595	PF00550	Phosphopantetheine attachment site
BBJ33_RS07595	PF14765	Polyketide synthase dehydratase
BBJ33_RS07600	PF14765	Polyketide synthase dehydratase
BBJ33_RS07600	PF08659	KR domain
BBJ33_RS07600	PF00501	AMP-binding enzyme
BBJ33_RS07600	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS07600	PF00668	Condensation domain
BBJ33_RS07600	PF00550	Phosphopantetheine attachment site
BBJ33_RS07600	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS07600	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS07600	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS07605	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS07605	PF14765	Polyketide synthase dehydratase
BBJ33_RS07605	PF00550	Phosphopantetheine attachment site
BBJ33_RS07605	PF08659	KR domain
BBJ33_RS07605	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS07605	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS07610	PF00550	Phosphopantetheine attachment site
BBJ33_RS07610	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS07610	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS07610	PF14765	Polyketide synthase dehydratase
BBJ33_RS07610	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS07610	PF08659	KR domain
BBJ33_RS07615	PF14765	Polyketide synthase dehydratase
BBJ33_RS07615	PF00550	Phosphopantetheine attachment site
BBJ33_RS07615	PF08659	KR domain
BBJ33_RS07615	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS07615	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS07615	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS07620	PF14765	Polyketide synthase dehydratase
BBJ33_RS07620	PF00550	Phosphopantetheine attachment site
BBJ33_RS07620	PF08659	KR domain
BBJ33_RS07620	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS07620	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS07620	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS07620	PF00668	Condensation domain
BBJ33_RS07620	PF00501	AMP-binding enzyme
BBJ33_RS07620	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS07625	PF11954	Domain of unknown function (DUF3471)
BBJ33_RS07625	PF00144	Beta-lactamase
BBJ33_RS07630	PF00676	Dehydrogenase E1 component
BBJ33_RS07635	PF02779	Transketolase, pyrimidine binding domain
BBJ33_RS07635	PF02780	Transketolase, C-terminal domain
BBJ33_RS07640	PF00364	Biotin-requiring enzyme
BBJ33_RS07640	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BBJ33_RS07640	PF02817	e3 binding domain
BBJ33_RS07645	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BBJ33_RS07645	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BBJ33_RS07660	PF01276	Orn/Lys/Arg decarboxylase, major domain
BBJ33_RS07660	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
BBJ33_RS07665	PF05256	Uncharacterised protein family (UPF0223)
BBJ33_RS07670	PF06335	Protein of unknown function (DUF1054)
BBJ33_RS07680	PF00459	Inositol monophosphatase family
BBJ33_RS07685	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS07690	PF01447	Thermolysin metallopeptidase, catalytic domain
BBJ33_RS07690	PF02868	Thermolysin metallopeptidase, alpha-helical domain
BBJ33_RS07690	PF03413	Peptidase propeptide and YPEB domain
BBJ33_RS07690	PF07504	Fungalysin/Thermolysin Propeptide Motif
BBJ33_RS07705	PF08281	Sigma-70, region 4
BBJ33_RS07705	PF04542	Sigma-70 region 2 
BBJ33_RS07710	PF13490	Putative zinc-finger
BBJ33_RS07720	PF17259	Family of unknown function (DUF5325)
BBJ33_RS07725	PF00679	Elongation factor G C-terminus
BBJ33_RS07725	PF14492	Elongation Factor G, domain II
BBJ33_RS07725	PF00009	Elongation factor Tu GTP binding domain
BBJ33_RS07725	PF03144	Elongation factor Tu domain 2
BBJ33_RS07730	PF14036	YlaH-like protein
BBJ33_RS07735	PF09963	Uncharacterized protein conserved in bacteria (DUF2197)
BBJ33_RS07740	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
BBJ33_RS07745	PF13638	PIN domain
BBJ33_RS07745	PF02562	PhoH-like protein
BBJ33_RS07755	PF04960	Glutaminase
BBJ33_RS07760	PF07408	Protein of unknown function (DUF1507)
BBJ33_RS07765	PF01098	Cell cycle protein
BBJ33_RS07770	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BBJ33_RS07770	PF00364	Biotin-requiring enzyme
BBJ33_RS07770	PF00289	Biotin carboxylase, N-terminal domain
BBJ33_RS07770	PF02785	Biotin carboxylase C-terminal domain
BBJ33_RS07770	PF00682	HMGL-like
BBJ33_RS07770	PF02436	Conserved carboxylase domain
BBJ33_RS07775	PF02628	Cytochrome oxidase assembly protein
BBJ33_RS07780	PF01040	UbiA prenyltransferase family
BBJ33_RS07785	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
BBJ33_RS07785	PF00034	Cytochrome c
BBJ33_RS07785	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
BBJ33_RS07790	PF00115	Cytochrome C and Quinol oxidase polypeptide I
BBJ33_RS07795	PF00510	Cytochrome c oxidase subunit III
BBJ33_RS07800	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
BBJ33_RS07805	PF09678	Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
BBJ33_RS07810	PF08868	YugN-like family
BBJ33_RS07815	PF00571	CBS domain
BBJ33_RS07820	PF14504	CAP-associated N-terminal
BBJ33_RS07820	PF00188	Cysteine-rich secretory protein family
BBJ33_RS07825	PF14071	Putative coat protein
BBJ33_RS07830	PF14003	YlbE-like protein
BBJ33_RS07835	PF06133	Control of competence regulator ComK, YlbF/YmcA
BBJ33_RS07840	PF09902	Uncharacterized protein conserved in bacteria (DUF2129)
BBJ33_RS07855	PF01467	Cytidylyltransferase-like
BBJ33_RS07860	PF07670	Nucleoside recognition
BBJ33_RS07865	PF01734	Patatin-like phospholipase
BBJ33_RS07870	PF13180	PDZ domain
BBJ33_RS07870	PF05362	Lon protease (S16) C-terminal proteolytic domain
BBJ33_RS07875	PF05636	HIGH Nucleotidyl Transferase
BBJ33_RS07880	PF02620	Large ribosomal RNA subunit accumulation protein YceD
BBJ33_RS07890	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS07895	PF08546	Ketopantoate reductase PanE/ApbA C terminal
BBJ33_RS07895	PF02558	Ketopantoate reductase PanE/ApbA
BBJ33_RS07900	PF10079	Bacillithiol biosynthesis BshC 
BBJ33_RS07905	PF02381	MraZ protein, putative antitoxin-like
BBJ33_RS07910	PF01795	MraW methylase family
BBJ33_RS07920	PF00905	Penicillin binding protein transpeptidase domain
BBJ33_RS07920	PF03717	Penicillin-binding Protein dimerisation domain
BBJ33_RS07920	PF03793	PASTA domain
BBJ33_RS07925	PF03793	PASTA domain
BBJ33_RS07925	PF03717	Penicillin-binding Protein dimerisation domain
BBJ33_RS07925	PF00905	Penicillin binding protein transpeptidase domain
BBJ33_RS07930	PF02875	Mur ligase family, glutamate ligase domain
BBJ33_RS07930	PF01225	Mur ligase family, catalytic domain
BBJ33_RS07930	PF08245	Mur ligase middle domain
BBJ33_RS07935	PF00953	Glycosyl transferase family 4
BBJ33_RS07935	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
BBJ33_RS07940	PF08245	Mur ligase middle domain
BBJ33_RS07940	PF02875	Mur ligase family, glutamate ligase domain
BBJ33_RS07945	PF01098	Cell cycle protein
BBJ33_RS07950	PF03033	Glycosyltransferase family 28 N-terminal domain
BBJ33_RS07950	PF04101	Glycosyltransferase family 28 C-terminal domain
BBJ33_RS07955	PF01565	FAD binding domain 
BBJ33_RS07955	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
BBJ33_RS07960	PF08478	POTRA domain, FtsQ-type
BBJ33_RS07965	PF02491	SHS2 domain inserted in FTSA
BBJ33_RS07970	PF00091	Tubulin/FtsZ family, GTPase domain
BBJ33_RS07970	PF12327	FtsZ family, C-terminal domain
BBJ33_RS07975	PF00082	Subtilase family
BBJ33_RS07975	PF05922	Peptidase inhibitor I9
BBJ33_RS07980	PF03419	Sporulation factor SpoIIGA 
BBJ33_RS07985	PF04545	Sigma-70, region 4
BBJ33_RS07985	PF04542	Sigma-70 region 2 
BBJ33_RS07990	PF04542	Sigma-70 region 2 
BBJ33_RS07990	PF04539	Sigma-70 region 3
BBJ33_RS07990	PF04545	Sigma-70, region 4
BBJ33_RS07995	PF00005	ABC transporter
BBJ33_RS08000	PF07687	Peptidase dimerisation domain
BBJ33_RS08000	PF01546	Peptidase family M20/M25/M40
BBJ33_RS08005	PF05239	PRC-barrel domain
BBJ33_RS08010	PF02578	Multi-copper polyphenol oxidoreductase laccase
BBJ33_RS08015	PF01168	Alanine racemase, N-terminal domain
BBJ33_RS08020	PF04472	Cell division protein SepF
BBJ33_RS08025	PF02325	YGGT family
BBJ33_RS08030	PF17774	Putative RNA-binding domain in YlmH
BBJ33_RS08030	PF01479	S4 domain
BBJ33_RS08035	PF05103	DivIVA protein
BBJ33_RS08045	PF00133	tRNA synthetases class I (I, L, M and V)
BBJ33_RS08045	PF08264	Anticodon-binding domain of tRNA
BBJ33_RS08050	PF01258	Prokaryotic dksA/traR C4-type zinc finger
BBJ33_RS08055	PF01252	Signal peptidase (SPase) II
BBJ33_RS08060	PF00849	RNA pseudouridylate synthase
BBJ33_RS08060	PF01479	S4 domain
BBJ33_RS08065	PF00156	Phosphoribosyl transferase domain
BBJ33_RS08070	PF00860	Permease family
BBJ33_RS08075	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
BBJ33_RS08075	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
BBJ33_RS08080	PF01979	Amidohydrolase family
BBJ33_RS08085	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
BBJ33_RS08085	PF00117	Glutamine amidotransferase class-I
BBJ33_RS08090	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BBJ33_RS08090	PF02142	MGS-like domain
BBJ33_RS08090	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BBJ33_RS08095	PF00175	Oxidoreductase NAD-binding domain 
BBJ33_RS08095	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
BBJ33_RS08100	PF01180	Dihydroorotate dehydrogenase
BBJ33_RS08105	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
BBJ33_RS08110	PF00156	Phosphoribosyl transferase domain
BBJ33_RS08115	PF01507	Phosphoadenosine phosphosulfate reductase family
BBJ33_RS08120	PF01384	Phosphate transporter family
BBJ33_RS08125	PF01747	ATP-sulfurylase
BBJ33_RS08125	PF14306	PUA-like domain
BBJ33_RS08135	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BBJ33_RS08140	PF01903	CbiX
BBJ33_RS08150	PF05670	NFACT protein RNA binding domain
BBJ33_RS08155	PF00690	Cation transporter/ATPase, N-terminus
BBJ33_RS08155	PF00689	Cation transporting ATPase, C-terminus
BBJ33_RS08160	PF08340	Domain of unknown function (DUF1732)
BBJ33_RS08160	PF03755	YicC-like family, N-terminal region 
BBJ33_RS08165	PF04025	Domain of unknown function (DUF370)
BBJ33_RS08170	PF00625	Guanylate kinase
BBJ33_RS08175	PF01192	RNA polymerase Rpb6 
BBJ33_RS08180	PF02441	Flavoprotein
BBJ33_RS08180	PF04127	DNA / pantothenate metabolism flavoprotein
BBJ33_RS08190	PF01327	Polypeptide deformylase
BBJ33_RS08195	PF00551	Formyl transferase
BBJ33_RS08195	PF02911	Formyl transferase, C-terminal domain
BBJ33_RS08200	PF01029	NusB family
BBJ33_RS08200	PF01189	16S rRNA methyltransferase RsmB/F
BBJ33_RS08205	PF04055	Radical SAM superfamily
BBJ33_RS08215	PF03793	PASTA domain
BBJ33_RS08215	PF00069	Protein kinase domain
BBJ33_RS08220	PF16745	RsgA N-terminal domain
BBJ33_RS08220	PF03193	RsgA GTPase
BBJ33_RS08225	PF00834	Ribulose-phosphate 3 epimerase family
BBJ33_RS08230	PF04265	Thiamin pyrophosphokinase, vitamin B1 binding domain
BBJ33_RS08230	PF04263	Thiamin pyrophosphokinase, catalytic domain
BBJ33_RS08235	PF08183	Stage V sporulation protein family
BBJ33_RS08240	PF00830	Ribosomal L28 family
BBJ33_RS08245	PF03780	Asp23 family, cell envelope-related function
BBJ33_RS08250	PF02734	DAK2 domain
BBJ33_RS08250	PF13684	Dihydroxyacetone kinase family
BBJ33_RS08255	PF01842	ACT domain
BBJ33_RS08255	PF03315	Serine dehydratase beta chain
BBJ33_RS08260	PF03313	Serine dehydratase alpha chain
BBJ33_RS08265	PF00271	Helicase conserved C-terminal domain
BBJ33_RS08265	PF17191	RecG wedge domain
BBJ33_RS08265	PF00270	DEAD/DEAH box helicase
BBJ33_RS08270	PF03061	Thioesterase superfamily
BBJ33_RS08275	PF02504	Fatty acid synthesis protein
BBJ33_RS08280	PF00698	Acyl transferase domain
BBJ33_RS08290	PF00550	Phosphopantetheine attachment site
BBJ33_RS08295	PF00035	Double-stranded RNA binding motif
BBJ33_RS08295	PF14622	Ribonuclease-III-like
BBJ33_RS08300	PF06470	SMC proteins Flexible Hinge Domain
BBJ33_RS08300	PF02463	RecF/RecN/SMC N terminal domain
BBJ33_RS08305	PF02881	SRP54-type protein, helical bundle domain
BBJ33_RS08305	PF00448	SRP54-type protein, GTPase domain
BBJ33_RS08315	PF04297	Putative helix-turn-helix protein, YlxM / p13 like
BBJ33_RS08320	PF00448	SRP54-type protein, GTPase domain
BBJ33_RS08320	PF02881	SRP54-type protein, helical bundle domain
BBJ33_RS08320	PF02978	Signal peptide binding domain
BBJ33_RS08325	PF00886	Ribosomal protein S16
BBJ33_RS08335	PF11068	YlqD protein
BBJ33_RS08340	PF01782	RimM N-terminal domain
BBJ33_RS08340	PF05239	PRC-barrel domain
BBJ33_RS08345	PF01746	tRNA (Guanine-1)-methyltransferase
BBJ33_RS08350	PF01245	Ribosomal protein L19
BBJ33_RS08355	PF01926	50S ribosome-binding GTPase
BBJ33_RS08360	PF01351	Ribonuclease HII
BBJ33_RS08370	PF01312	FlhB HrpN YscU SpaS Family
BBJ33_RS08375	PF08442	ATP-grasp domain
BBJ33_RS08375	PF00549	CoA-ligase
BBJ33_RS08380	PF00549	CoA-ligase
BBJ33_RS08380	PF02629	CoA binding domain
BBJ33_RS08385	PF02481	DNA recombination-mediator protein A
BBJ33_RS08390	PF01131	DNA topoisomerase
BBJ33_RS08390	PF01396	Topoisomerase DNA binding C4 zinc finger
BBJ33_RS08390	PF01751	Toprim domain
BBJ33_RS08395	PF01134	Glucose inhibited division protein A
BBJ33_RS08400	PF02899	Phage integrase, N-terminal SAM-like domain
BBJ33_RS08400	PF00589	Phage integrase family
BBJ33_RS08405	PF00227	Proteasome subunit
BBJ33_RS08410	PF07724	AAA domain (Cdc48 subfamily)
BBJ33_RS08410	PF00004	ATPase family associated with various cellular activities (AAA)
BBJ33_RS08410	PF10431	C-terminal, D2-small domain, of ClpB protein 
BBJ33_RS08415	PF06018	CodY GAF-like domain
BBJ33_RS08415	PF08222	CodY helix-turn-helix domain
BBJ33_RS08420	PF00460	Flagella basal body rod protein
BBJ33_RS08425	PF00460	Flagella basal body rod protein
BBJ33_RS08425	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BBJ33_RS08430	PF02049	Flagellar hook-basal body complex protein FliE
BBJ33_RS08435	PF01514	Secretory protein of YscJ/FliF family
BBJ33_RS08435	PF08345	Flagellar M-ring protein C-terminal
BBJ33_RS08440	PF14842	FliG N-terminal domain
BBJ33_RS08440	PF14841	FliG middle domain
BBJ33_RS08440	PF01706	FliG C-terminal domain
BBJ33_RS08445	PF02108	Flagellar assembly protein FliH
BBJ33_RS08450	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BBJ33_RS08450	PF18269	T3SS EscN ATPase C-terminal domain
BBJ33_RS08450	PF02874	ATP synthase alpha/beta family, beta-barrel domain
BBJ33_RS08455	PF02050	Flagellar FliJ protein
BBJ33_RS08460	PF03448	MgtE intracellular N domain
BBJ33_RS08465	PF02120	Flagellar hook-length control protein FliK
BBJ33_RS08470	PF03963	Flagellar hook capping protein - N-terminal region
BBJ33_RS08475	PF00460	Flagella basal body rod protein
BBJ33_RS08475	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BBJ33_RS08480	PF06289	Flagellar and Swarming motility proteins
BBJ33_RS08485	PF03748	Flagellar basal body-associated protein FliL
BBJ33_RS08490	PF02154	Flagellar motor switch protein FliM
BBJ33_RS08490	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
BBJ33_RS08495	PF04509	CheC-like family
BBJ33_RS08495	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
BBJ33_RS08500	PF00072	Response regulator receiver domain
BBJ33_RS08505	PF04347	Flagellar biosynthesis protein, FliO
BBJ33_RS08510	PF00813	FliP family
BBJ33_RS08515	PF01313	Bacterial export proteins, family 3
BBJ33_RS08520	PF01311	Bacterial export proteins, family 1
BBJ33_RS08525	PF01312	FlhB HrpN YscU SpaS Family
BBJ33_RS08530	PF00771	FHIPEP family
BBJ33_RS08535	PF00448	SRP54-type protein, GTPase domain
BBJ33_RS08540	PF10609	NUBPL iron-transfer P-loop NTPase
BBJ33_RS08545	PF01339	CheB methylesterase
BBJ33_RS08545	PF00072	Response regulator receiver domain
BBJ33_RS08550	PF07194	P2 response regulator binding domain
BBJ33_RS08550	PF01627	Hpt domain
BBJ33_RS08550	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS08550	PF02895	Signal transducing histidine kinase, homodimeric domain
BBJ33_RS08550	PF01584	CheW-like domain
BBJ33_RS08555	PF01584	CheW-like domain
BBJ33_RS08560	PF04509	CheC-like family
BBJ33_RS08565	PF03975	CheD chemotactic sensory transduction
BBJ33_RS08570	PF04545	Sigma-70, region 4
BBJ33_RS08570	PF04539	Sigma-70 region 3
BBJ33_RS08570	PF04542	Sigma-70 region 2 
BBJ33_RS08580	PF00318	Ribosomal protein S2
BBJ33_RS08585	PF00889	Elongation factor TS
BBJ33_RS08590	PF00696	Amino acid kinase family
BBJ33_RS08595	PF01765	Ribosome recycling factor
BBJ33_RS08600	PF01255	Putative undecaprenyl diphosphate synthase
BBJ33_RS08610	PF13288	DXP reductoisomerase C-terminal domain
BBJ33_RS08610	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
BBJ33_RS08610	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
BBJ33_RS08615	PF17820	PDZ domain
BBJ33_RS08615	PF02163	Peptidase family M50
BBJ33_RS08620	PF03129	Anticodon binding domain
BBJ33_RS08620	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BBJ33_RS08620	PF04073	Aminoacyl-tRNA editing domain
BBJ33_RS08625	PF11490	DNA polymerase III polC-type N-terminus II
BBJ33_RS08625	PF07733	Bacterial DNA polymerase III alpha NTPase domain
BBJ33_RS08625	PF02811	PHP domain
BBJ33_RS08625	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
BBJ33_RS08625	PF14480	DNA polymerase III polC-type N-terminus I
BBJ33_RS08625	PF00929	Exonuclease
BBJ33_RS08625	PF14579	Helix-hairpin-helix motif
BBJ33_RS08630	PF17384	RimP C-terminal SH3 domain
BBJ33_RS08630	PF02576	RimP N-terminal domain
BBJ33_RS08635	PF00575	S1 RNA binding domain
BBJ33_RS08635	PF13184	NusA-like KH domain
BBJ33_RS08635	PF08529	NusA N-terminal domain
BBJ33_RS08640	PF04296	Protein of unknown function (DUF448)
BBJ33_RS08645	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
BBJ33_RS08650	PF04760	Translation initiation factor IF-2, N-terminal region
BBJ33_RS08650	PF00009	Elongation factor Tu GTP binding domain
BBJ33_RS08650	PF11987	Translation-initiation factor 2
BBJ33_RS08655	PF04456	Protein of unknown function (DUF503)
BBJ33_RS08660	PF02033	Ribosome-binding factor A
BBJ33_RS08665	PF01509	TruB family pseudouridylate synthase (N terminal domain)
BBJ33_RS08665	PF16198	tRNA pseudouridylate synthase B C-terminal domain
BBJ33_RS08670	PF01687	Riboflavin kinase
BBJ33_RS08670	PF06574	FAD synthetase
BBJ33_RS08675	PF00312	Ribosomal protein S15
BBJ33_RS08680	PF00575	S1 RNA binding domain
BBJ33_RS08680	PF03725	3' exoribonuclease family, domain 2
BBJ33_RS08680	PF01138	3' exoribonuclease family, domain 1
BBJ33_RS08680	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
BBJ33_RS08680	PF00013	KH domain
BBJ33_RS08685	PF01522	Polysaccharide deacetylase
BBJ33_RS08690	PF05193	Peptidase M16 inactive domain
BBJ33_RS08690	PF00675	Insulinase (Peptidase family M16)
BBJ33_RS08695	PF05239	PRC-barrel domain
BBJ33_RS08700	PF16924	Dipicolinate synthase subunit A N-terminal domain
BBJ33_RS08700	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
BBJ33_RS08705	PF02441	Flavoprotein
BBJ33_RS08710	PF01118	Semialdehyde dehydrogenase, NAD binding domain
BBJ33_RS08710	PF02774	Semialdehyde dehydrogenase, dimerisation domain
BBJ33_RS08715	PF00696	Amino acid kinase family
BBJ33_RS08715	PF13840	ACT domain 
BBJ33_RS08720	PF00701	Dihydrodipicolinate synthetase family
BBJ33_RS08725	PF17770	Ribonuclease J C-terminal domain
BBJ33_RS08725	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
BBJ33_RS08725	PF00753	Metallo-beta-lactamase superfamily
BBJ33_RS08730	PF00574	Clp protease
BBJ33_RS08735	PF14035	YlzJ-like protein
BBJ33_RS08740	PF01580	FtsK/SpoIIIE family
BBJ33_RS08740	PF09397	Ftsk gamma domain
BBJ33_RS08740	PF17854	FtsK alpha domain
BBJ33_RS08745	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS08745	PF07702	UTRA domain
BBJ33_RS08750	PF07690	Major Facilitator Superfamily
BBJ33_RS08755	PF01047	MarR family
BBJ33_RS08760	PF03176	MMPL family
BBJ33_RS08765	PF05193	Peptidase M16 inactive domain
BBJ33_RS08770	PF05193	Peptidase M16 inactive domain
BBJ33_RS08770	PF00675	Insulinase (Peptidase family M16)
BBJ33_RS08780	PF11588	Protein of unknown function (DUF3243)
BBJ33_RS08785	PF11868	Protein of unknown function (DUF3388)
BBJ33_RS08790	PF13464	Domain of unknown function (DUF4115)
BBJ33_RS08795	PF01066	CDP-alcohol phosphatidyltransferase
BBJ33_RS08800	PF02464	Competence-damaged protein
BBJ33_RS08800	PF18146	Damage-inducible protein CinA KH domain
BBJ33_RS08800	PF00994	Probable molybdopterin binding domain
BBJ33_RS08805	PF00154	recA bacterial DNA recombination protein
BBJ33_RS08810	PF00144	Beta-lactamase
BBJ33_RS08815	PF00013	KH domain
BBJ33_RS08815	PF12072	Domain of unknown function (DUF3552)
BBJ33_RS08815	PF01966	HD domain
BBJ33_RS08820	PF13277	YmdB-like protein
BBJ33_RS08825	PF04232	Stage V sporulation protein S (SpoVS)
BBJ33_RS08830	PF08240	Alcohol dehydrogenase GroES-like domain
BBJ33_RS08830	PF00107	Zinc-binding dehydrogenase
BBJ33_RS08835	PF00155	Aminotransferase class I and II
BBJ33_RS08840	PF01938	TRAM domain
BBJ33_RS08840	PF00919	Uncharacterized protein family UPF0004
BBJ33_RS08840	PF04055	Radical SAM superfamily
BBJ33_RS08845	PF06133	Control of competence regulator ComK, YlbF/YmcA
BBJ33_RS08850	PF10628	Outer spore coat protein E (CotE)
BBJ33_RS08855	PF05190	MutS family domain IV
BBJ33_RS08855	PF01624	MutS domain I
BBJ33_RS08855	PF00488	MutS domain V
BBJ33_RS08855	PF05188	MutS domain II
BBJ33_RS08855	PF05192	MutS domain III
BBJ33_RS08860	PF01119	DNA mismatch repair protein, C-terminal domain
BBJ33_RS08860	PF08676	MutL C terminal dimerisation domain
BBJ33_RS08870	PF00753	Metallo-beta-lactamase superfamily
BBJ33_RS08875	PF00698	Acyl transferase domain
BBJ33_RS08880	PF00698	Acyl transferase domain
BBJ33_RS08885	PF00698	Acyl transferase domain
BBJ33_RS08890	PF00550	Phosphopantetheine attachment site
BBJ33_RS08895	PF08540	Hydroxymethylglutaryl-coenzyme A synthase C terminal
BBJ33_RS08895	PF01154	Hydroxymethylglutaryl-coenzyme A synthase N terminal
BBJ33_RS08900	PF00378	Enoyl-CoA hydratase/isomerase
BBJ33_RS08905	PF00378	Enoyl-CoA hydratase/isomerase
BBJ33_RS08910	PF14765	Polyketide synthase dehydratase
BBJ33_RS08910	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS08910	PF00550	Phosphopantetheine attachment site
BBJ33_RS08910	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS08910	PF00501	AMP-binding enzyme
BBJ33_RS08910	PF08659	KR domain
BBJ33_RS08910	PF00668	Condensation domain
BBJ33_RS08910	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS08910	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS08915	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS08915	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS08915	PF00550	Phosphopantetheine attachment site
BBJ33_RS08915	PF14765	Polyketide synthase dehydratase
BBJ33_RS08915	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS08915	PF08659	KR domain
BBJ33_RS08920	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS08920	PF00550	Phosphopantetheine attachment site
BBJ33_RS08920	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS08920	PF08242	Methyltransferase domain
BBJ33_RS08920	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS08920	PF08659	KR domain
BBJ33_RS08920	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS08920	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS08920	PF08659	KR domain
BBJ33_RS08920	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS08920	PF14765	Polyketide synthase dehydratase
BBJ33_RS08920	PF00550	Phosphopantetheine attachment site
BBJ33_RS08920	PF14765	Polyketide synthase dehydratase
BBJ33_RS08920	PF08242	Methyltransferase domain
BBJ33_RS08925	PF08659	KR domain
BBJ33_RS08925	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS08925	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS08925	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS08925	PF00550	Phosphopantetheine attachment site
BBJ33_RS08925	PF14765	Polyketide synthase dehydratase
BBJ33_RS08925	PF00668	Condensation domain
BBJ33_RS08925	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS08925	PF00501	AMP-binding enzyme
BBJ33_RS08930	PF00975	Thioesterase domain
BBJ33_RS08930	PF08242	Methyltransferase domain
BBJ33_RS08930	PF14765	Polyketide synthase dehydratase
BBJ33_RS08930	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS08930	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS08930	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS08930	PF00550	Phosphopantetheine attachment site
BBJ33_RS08935	PF00067	Cytochrome P450
BBJ33_RS08940	PF14040	Deoxyribonuclease NucA/NucB
BBJ33_RS08945	PF06912	Protein of unknown function (DUF1275)
BBJ33_RS08955	PF00082	Subtilase family
BBJ33_RS08965	PF05908	Poly-gamma-glutamate hydrolase
BBJ33_RS08970	PF02566	OsmC-like protein
BBJ33_RS08975	PF00893	Small Multidrug Resistance protein
BBJ33_RS08980	PF00893	Small Multidrug Resistance protein
BBJ33_RS08990	PF12788	YmaF family
BBJ33_RS09000	PF17209	Hfq protein
BBJ33_RS09005	PF14157	YmzC-like protein
BBJ33_RS09015	PF07972	NrdI Flavodoxin like 
BBJ33_RS09020	PF02867	Ribonucleotide reductase, barrel domain
BBJ33_RS09020	PF00317	Ribonucleotide reductase, all-alpha domain
BBJ33_RS09020	PF08343	Ribonucleotide reductase N-terminal
BBJ33_RS09025	PF00268	Ribonucleotide reductase, small chain
BBJ33_RS09035	PF05036	Sporulation related domain
BBJ33_RS09035	PF01520	N-acetylmuramoyl-L-alanine amidase
BBJ33_RS09045	PF17866	AAA lid domain
BBJ33_RS09045	PF00004	ATPase family associated with various cellular activities (AAA)
BBJ33_RS09050	PF16360	GTP-binding GTPase Middle Region
BBJ33_RS09050	PF13167	GTP-binding GTPase N-terminal
BBJ33_RS09050	PF01926	50S ribosome-binding GTPase
BBJ33_RS09055	PF06838	Methionine gamma-lyase 
BBJ33_RS09060	PF13411	MerR HTH family regulatory protein
BBJ33_RS09065	PF00120	Glutamine synthetase, catalytic domain
BBJ33_RS09065	PF03951	Glutamine synthetase, beta-Grasp domain
BBJ33_RS09080	PF17851	Beta xylosidase C-terminal Concanavalin A-like domain 
BBJ33_RS09080	PF04616	Glycosyl hydrolases family 43
BBJ33_RS09085	PF00480	ROK family
BBJ33_RS09090	PF01261	Xylose isomerase-like TIM barrel
BBJ33_RS09095	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BBJ33_RS09095	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BBJ33_RS09100	PF00391	PEP-utilising enzyme, mobile domain
BBJ33_RS09100	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
BBJ33_RS09120	PF13280	WYL domain
BBJ33_RS09120	PF08279	HTH domain
BBJ33_RS09125	PF05163	DinB family
BBJ33_RS09130	PF00107	Zinc-binding dehydrogenase
BBJ33_RS09130	PF08240	Alcohol dehydrogenase GroES-like domain
BBJ33_RS09145	PF17094	Uncharacterised protein family (UPF0715)
BBJ33_RS09150	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS09150	PF14268	YoaP-like
BBJ33_RS09160	PF13021	Domain of unknown function (DUF3885)
BBJ33_RS09170	PF03067	Lytic polysaccharide mono-oxygenase, cellulose-degrading
BBJ33_RS09170	PF18416	N-acetylglucosamine binding protein domain 2
BBJ33_RS09180	PF11962	Peptidase_G2, IMC autoproteolytic cleavage domain
BBJ33_RS09180	PF12708	Pectate lyase superfamily protein
BBJ33_RS09185	PF00692	dUTPase
BBJ33_RS09190	PF05908	Poly-gamma-glutamate hydrolase
BBJ33_RS09200	PF10710	Protein of unknown function (DUF2512)
BBJ33_RS09210	PF01726	LexA DNA binding domain
BBJ33_RS09210	PF00717	Peptidase S24-like
BBJ33_RS09215	PF01476	LysM domain
BBJ33_RS09220	PF00239	Resolvase, N terminal domain
BBJ33_RS09225	PF05979	Bacterial protein of unknown function (DUF896)
BBJ33_RS09230	PF02779	Transketolase, pyrimidine binding domain
BBJ33_RS09230	PF02780	Transketolase, C-terminal domain
BBJ33_RS09230	PF00456	Transketolase, thiamine diphosphate binding domain
BBJ33_RS09235	PF10747	Sporulation inhibitor of replication protein SirA 
BBJ33_RS09240	PF03672	Uncharacterised protein family (UPF0154)
BBJ33_RS09245	PF09388	Spo0E like sporulation regulatory protein
BBJ33_RS09250	PF02683	Cytochrome C biogenesis protein transmembrane region
BBJ33_RS09255	PF00072	Response regulator receiver domain
BBJ33_RS09260	PF07301	Protein of unknown function (DUF1453)
BBJ33_RS09265	PF11084	Protein of unknown function (DUF2621)
BBJ33_RS09275	PF08179	Small acid-soluble spore protein P family
BBJ33_RS09285	PF00694	Aconitase C-terminal domain
BBJ33_RS09285	PF00330	Aconitase family (aconitate hydratase)
BBJ33_RS09290	PF00578	AhpC/TSA family
BBJ33_RS09295	PF13040	Fur-regulated basic protein B
BBJ33_RS09300	PF08177	Small acid-soluble spore protein N family
BBJ33_RS09310	PF03061	Thioesterase superfamily
BBJ33_RS09320	PF01521	Iron-sulphur cluster biosynthesis
BBJ33_RS09325	PF02660	Glycerol-3-phosphate acyltransferase
BBJ33_RS09330	PF13380	CoA binding domain
BBJ33_RS09335	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS09335	PF01751	Toprim domain
BBJ33_RS09335	PF00204	DNA gyrase B
BBJ33_RS09335	PF00986	DNA gyrase B subunit, carboxyl terminus
BBJ33_RS09340	PF00521	DNA gyrase/topoisomerase IV, subunit A
BBJ33_RS09340	PF03989	DNA gyrase C-terminal domain, beta-propeller
BBJ33_RS09350	PF01235	Sodium:alanine symporter family
BBJ33_RS09355	PF00294	pfkB family carbohydrate kinase
BBJ33_RS09360	PF08240	Alcohol dehydrogenase GroES-like domain
BBJ33_RS09360	PF00107	Zinc-binding dehydrogenase
BBJ33_RS09365	PF01081	KDPG and KHG aldolase
BBJ33_RS09370	PF03786	D-mannonate dehydratase (UxuA)
BBJ33_RS09375	PF00106	short chain dehydrogenase
BBJ33_RS09380	PF00356	Bacterial regulatory proteins, lacI family
BBJ33_RS09385	PF07690	Major Facilitator Superfamily
BBJ33_RS09395	PF13761	Domain of unknown function (DUF4166)
BBJ33_RS09400	PF14158	YndJ-like protein
BBJ33_RS09410	PF00150	Cellulase (glycosyl hydrolase family 5)
BBJ33_RS09410	PF00942	Cellulose binding domain
BBJ33_RS09420	PF00512	His Kinase A (phospho-acceptor) domain
BBJ33_RS09420	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS09425	PF00486	Transcriptional regulatory protein, C terminal
BBJ33_RS09425	PF00072	Response regulator receiver domain
BBJ33_RS09430	PF02055	Glycosyl hydrolase family 30 TIM-barrel domain
BBJ33_RS09430	PF17189	Glycosyl hydrolase family 30 beta sandwich domain
BBJ33_RS09435	PF03422	Carbohydrate binding module (family 6)
BBJ33_RS09435	PF04616	Glycosyl hydrolases family 43
BBJ33_RS09440	PF00501	AMP-binding enzyme
BBJ33_RS09440	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS09440	PF00975	Thioesterase domain
BBJ33_RS09440	PF00668	Condensation domain
BBJ33_RS09440	PF00550	Phosphopantetheine attachment site
BBJ33_RS09445	PF00501	AMP-binding enzyme
BBJ33_RS09445	PF00668	Condensation domain
BBJ33_RS09445	PF00550	Phosphopantetheine attachment site
BBJ33_RS09445	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS09450	PF00202	Aminotransferase class-III
BBJ33_RS09450	PF00501	AMP-binding enzyme
BBJ33_RS09450	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS09450	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS09450	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS09450	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS09450	PF00550	Phosphopantetheine attachment site
BBJ33_RS09450	PF00668	Condensation domain
BBJ33_RS09455	PF00698	Acyl transferase domain
BBJ33_RS09465	PF01144	Coenzyme A transferase
BBJ33_RS09470	PF01144	Coenzyme A transferase
BBJ33_RS09480	PF00067	Cytochrome P450
BBJ33_RS09485	PF06968	Biotin and Thiamin Synthesis associated domain
BBJ33_RS09485	PF04055	Radical SAM superfamily
BBJ33_RS09495	PF00155	Aminotransferase class I and II
BBJ33_RS09500	PF00202	Aminotransferase class-III
BBJ33_RS09505	PF03744	6-carboxyhexanoate--CoA ligase
BBJ33_RS09510	PF04138	GtrA-like protein
BBJ33_RS09515	PF00483	Nucleotidyl transferase
BBJ33_RS09520	PF09335	SNARE associated Golgi protein
BBJ33_RS09525	PF01039	Carboxyl transferase domain
BBJ33_RS09530	PF00378	Enoyl-CoA hydratase/isomerase
BBJ33_RS09535	PF00682	HMGL-like
BBJ33_RS09540	PF00364	Biotin-requiring enzyme
BBJ33_RS09545	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BBJ33_RS09545	PF02785	Biotin carboxylase C-terminal domain
BBJ33_RS09545	PF00289	Biotin carboxylase, N-terminal domain
BBJ33_RS09550	PF00501	AMP-binding enzyme
BBJ33_RS09550	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS09555	PF02770	Acyl-CoA dehydrogenase, middle domain
BBJ33_RS09555	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BBJ33_RS09555	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BBJ33_RS09560	PF02638	Glycosyl hydrolase-like 10
BBJ33_RS09565	PF07098	Protein of unknown function (DUF1360)
BBJ33_RS09570	PF00550	Phosphopantetheine attachment site
BBJ33_RS09570	PF00975	Thioesterase domain
BBJ33_RS09570	PF00668	Condensation domain
BBJ33_RS09570	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS09570	PF00501	AMP-binding enzyme
BBJ33_RS09575	PF00501	AMP-binding enzyme
BBJ33_RS09575	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS09575	PF00668	Condensation domain
BBJ33_RS09575	PF00550	Phosphopantetheine attachment site
BBJ33_RS09580	PF00550	Phosphopantetheine attachment site
BBJ33_RS09580	PF00668	Condensation domain
BBJ33_RS09580	PF00501	AMP-binding enzyme
BBJ33_RS09580	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS09585	PF00668	Condensation domain
BBJ33_RS09585	PF00550	Phosphopantetheine attachment site
BBJ33_RS09585	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS09585	PF00501	AMP-binding enzyme
BBJ33_RS09590	PF00501	AMP-binding enzyme
BBJ33_RS09590	PF00550	Phosphopantetheine attachment site
BBJ33_RS09590	PF00668	Condensation domain
BBJ33_RS09590	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS09595	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
BBJ33_RS09600	PF01263	Aldose 1-epimerase
BBJ33_RS09605	PF01554	MatE
BBJ33_RS09610	PF16800	IseA DL-endopeptidase inhibitor
BBJ33_RS09615	PF04740	LXG domain of WXG superfamily
BBJ33_RS09630	PF01510	N-acetylmuramoyl-L-alanine amidase
BBJ33_RS09630	PF01471	Putative peptidoglycan binding domain
BBJ33_RS09630	PF01476	LysM domain
BBJ33_RS09635	PF04688	SPP1 phage holin
BBJ33_RS09640	PF10960	BhlA holin family
BBJ33_RS09660	PF11962	Peptidase_G2, IMC autoproteolytic cleavage domain
BBJ33_RS09660	PF12708	Pectate lyase superfamily protein
BBJ33_RS09665	PF13457	GW (Gly-Tryp) dipeptide domain
BBJ33_RS09665	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
BBJ33_RS09675	PF01464	Transglycosylase SLT domain
BBJ33_RS09760	PF00589	Phage integrase family
BBJ33_RS09810	PF17356	Phage-like element PBSX protein XtrA
BBJ33_RS09840	PF01381	Helix-turn-helix
BBJ33_RS09870	PF00589	Phage integrase family
BBJ33_RS09875	PF12728	Helix-turn-helix domain
BBJ33_RS09885	PF07690	Major Facilitator Superfamily
BBJ33_RS09895	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BBJ33_RS09895	PF02824	TGS domain
BBJ33_RS09895	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BBJ33_RS09895	PF03129	Anticodon binding domain
BBJ33_RS09900	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BBJ33_RS09900	PF03466	LysR substrate binding domain
BBJ33_RS09905	PF08240	Alcohol dehydrogenase GroES-like domain
BBJ33_RS09905	PF00107	Zinc-binding dehydrogenase
BBJ33_RS09910	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
BBJ33_RS09910	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BBJ33_RS09915	PF01645	Conserved region in glutamate synthase
BBJ33_RS09915	PF00310	Glutamine amidotransferases class-II
BBJ33_RS09915	PF04898	Glutamate synthase central domain
BBJ33_RS09915	PF01493	GXGXG motif
BBJ33_RS09920	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BBJ33_RS09920	PF03466	LysR substrate binding domain
BBJ33_RS09925	PF01472	PUA domain
BBJ33_RS09925	PF00696	Amino acid kinase family
BBJ33_RS09930	PF14748	Pyrroline-5-carboxylate reductase dimerisation
BBJ33_RS09930	PF03807	NADP oxidoreductase coenzyme F420-dependent
BBJ33_RS09935	PF02334	Replication terminator protein
BBJ33_RS09940	PF00106	short chain dehydrogenase
BBJ33_RS09945	PF06103	Bacterial protein of unknown function (DUF948)
BBJ33_RS09955	PF07690	Major Facilitator Superfamily
BBJ33_RS09960	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BBJ33_RS09960	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BBJ33_RS09965	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BBJ33_RS09965	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BBJ33_RS09970	PF01568	Molydopterin dinucleotide binding domain
BBJ33_RS09970	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
BBJ33_RS09970	PF00384	Molybdopterin oxidoreductase
BBJ33_RS09995	PF01638	HxlR-like helix-turn-helix
BBJ33_RS10000	PF01588	Putative tRNA binding domain
BBJ33_RS10010	PF13305	Tetracyclin repressor-like, C-terminal domain
BBJ33_RS10010	PF00440	Bacterial regulatory proteins, tetR family
BBJ33_RS10015	PF00753	Metallo-beta-lactamase superfamily
BBJ33_RS10025	PF01022	Bacterial regulatory protein, arsR family
BBJ33_RS10035	PF04238	Protein of unknown function (DUF420)
BBJ33_RS10040	PF18846	Bacterial archaeo-eukaryotic release factor family 5
BBJ33_RS10050	PF02016	LD-carboxypeptidase N-terminal domain
BBJ33_RS10050	PF17676	LD-carboxypeptidase C-terminal domain
BBJ33_RS10060	PF01476	LysM domain
BBJ33_RS10060	PF06725	3D domain
BBJ33_RS10065	PF09382	RQC domain
BBJ33_RS10065	PF00570	HRDC domain
BBJ33_RS10065	PF00271	Helicase conserved C-terminal domain
BBJ33_RS10065	PF00270	DEAD/DEAH box helicase
BBJ33_RS10065	PF16124	RecQ zinc-binding
BBJ33_RS10075	PF02525	Flavodoxin-like fold
BBJ33_RS10080	PF01258	Prokaryotic dksA/traR C4-type zinc finger
BBJ33_RS10095	PF00011	Hsp20/alpha crystallin family
BBJ33_RS10110	PF08000	Bacterial PH domain
BBJ33_RS10120	PF00171	Aldehyde dehydrogenase family
BBJ33_RS10125	PF13249	Squalene-hopene cyclase N-terminal domain
BBJ33_RS10125	PF13243	Squalene-hopene cyclase C-terminal domain
BBJ33_RS10130	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
BBJ33_RS10130	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
BBJ33_RS10135	PF00209	Sodium:neurotransmitter symporter family
BBJ33_RS10140	PF01758	Sodium Bile acid symporter family
BBJ33_RS10145	PF00753	Metallo-beta-lactamase superfamily
BBJ33_RS10150	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BBJ33_RS10150	PF00364	Biotin-requiring enzyme
BBJ33_RS10150	PF02817	e3 binding domain
BBJ33_RS10155	PF02779	Transketolase, pyrimidine binding domain
BBJ33_RS10155	PF16870	2-oxoglutarate dehydrogenase C-terminal
BBJ33_RS10155	PF00676	Dehydrogenase E1 component
BBJ33_RS10160	PF00092	von Willebrand factor type A domain
BBJ33_RS10165	PF07728	AAA domain (dynein-related subfamily)
BBJ33_RS10170	PF00080	Copper/zinc superoxide dismutase (SODC)
BBJ33_RS10170	PF13627	Prokaryotic lipoprotein-attachment site
BBJ33_RS10175	PF00877	NlpC/P60 family
BBJ33_RS10175	PF01476	LysM domain
BBJ33_RS10180	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
BBJ33_RS10185	PF02457	DisA bacterial checkpoint controller nucleotide-binding
BBJ33_RS10185	PF10372	Bacterial membrane-spanning protein N-terminus
BBJ33_RS10190	PF01554	MatE
BBJ33_RS10195	PF01740	STAS domain
BBJ33_RS10200	PF02585	GlcNAc-PI de-N-acetylase
BBJ33_RS10205	PF08830	Protein of unknown function (DUF1806)
BBJ33_RS10215	PF00892	EamA-like transporter family
BBJ33_RS10230	PF14552	Tautomerase enzyme
BBJ33_RS10240	PF01638	HxlR-like helix-turn-helix
BBJ33_RS10245	PF00881	Nitroreductase family
BBJ33_RS10250	PF01738	Dienelactone hydrolase family
BBJ33_RS10255	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BBJ33_RS10260	PF11755	Protein of unknown function (DUF3311)
BBJ33_RS10265	PF00474	Sodium:solute symporter family
BBJ33_RS10275	PF00232	Glycosyl hydrolase family 1
BBJ33_RS10280	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS10280	PF07702	UTRA domain
BBJ33_RS10285	PF03572	Peptidase family S41
BBJ33_RS10285	PF17820	PDZ domain
BBJ33_RS10285	PF01471	Putative peptidoglycan binding domain
BBJ33_RS10290	PF08241	Methyltransferase domain
BBJ33_RS10300	PF02557	D-alanyl-D-alanine carboxypeptidase
BBJ33_RS10305	PF01048	Phosphorylase superfamily
BBJ33_RS10310	PF14191	YodL-like
BBJ33_RS10315	PF01569	PAP2 superfamily
BBJ33_RS10320	PF14162	YozD-like protein
BBJ33_RS10340	PF06855	YozE SAM-like fold
BBJ33_RS10345	PF14122	YokU-like protein, putative antitoxin
BBJ33_RS10350	PF12544	Lysine-2,3-aminomutase 
BBJ33_RS10355	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS10360	PF07687	Peptidase dimerisation domain
BBJ33_RS10360	PF01546	Peptidase family M20/M25/M40
BBJ33_RS10365	PF01144	Coenzyme A transferase
BBJ33_RS10370	PF01144	Coenzyme A transferase
BBJ33_RS10375	PF00202	Aminotransferase class-III
BBJ33_RS10380	PF06445	GyrI-like small molecule binding domain
BBJ33_RS10390	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS10395	PF00535	Glycosyl transferase family 2
BBJ33_RS10410	PF12996	DUF based on E. rectale Gene description (DUF3880)
BBJ33_RS10415	PF02333	Phytase
BBJ33_RS10420	PF08485	Polysaccharide biosynthesis protein C-terminal
BBJ33_RS10420	PF02719	Polysaccharide biosynthesis protein
BBJ33_RS10425	PF11518	Protein of unknown function (DUF3221)
BBJ33_RS10460	PF14037	YoqO-like protein
BBJ33_RS10470	PF18801	response regulator aspartate phosphatase H, N terminal
BBJ33_RS10490	PF16219	Domain of unknown function (DUF4879)
BBJ33_RS10515	PF14411	A nuclease of the HNH/ENDO VII superfamily with conserved LHH
BBJ33_RS10515	PF04740	LXG domain of WXG superfamily
BBJ33_RS10520	PF09346	SMI1 / KNR4 family (SUKH-1)
BBJ33_RS10530	PF00239	Resolvase, N terminal domain
BBJ33_RS10530	PF07508	Recombinase
BBJ33_RS10535	PF02719	Polysaccharide biosynthesis protein
BBJ33_RS10540	PF01641	SelR domain
BBJ33_RS10545	PF01625	Peptide methionine sulfoxide reductase
BBJ33_RS10550	PF01047	MarR family
BBJ33_RS10555	PF09911	Uncharacterized protein conserved in bacteria (DUF2140)
BBJ33_RS10560	PF13472	GDSL-like Lipase/Acylhydrolase family
BBJ33_RS10565	PF02630	SCO1/SenC
BBJ33_RS10570	PF10751	Protein of unknown function (DUF2535)
BBJ33_RS10575	PF00291	Pyridoxal-phosphate dependent enzyme
BBJ33_RS10575	PF00585	C-terminal regulatory domain of Threonine dehydratase
BBJ33_RS10580	PF00158	Sigma-54 interaction domain
BBJ33_RS10580	PF08461	Ribonuclease R winged-helix domain
BBJ33_RS10585	PF03006	Haemolysin-III related
BBJ33_RS10595	PF00186	Dihydrofolate reductase
BBJ33_RS10600	PF00303	Thymidylate synthase
BBJ33_RS10605	PF14005	YpjP-like protein
BBJ33_RS10610	PF04445	Putative SAM-dependent methyltransferase
BBJ33_RS10615	PF06491	Disulphide isomerase
BBJ33_RS10620	PF00920	Dehydratase family
BBJ33_RS10625	PF13769	Virulence factor
BBJ33_RS10625	PF08712	Scaffold protein Nfu/NifU N terminal
BBJ33_RS10630	PF01966	HD domain
BBJ33_RS10635	PF00255	Glutathione peroxidase
BBJ33_RS10640	PF04204	Homoserine O-succinyltransferase 
BBJ33_RS10645	PF06925	Monogalactosyldiacylglycerol (MGDG) synthase
BBJ33_RS10645	PF00534	Glycosyl transferases group 1
BBJ33_RS10650	PF00313	'Cold-shock' DNA-binding domain
BBJ33_RS10660	PF10819	Protein of unknown function (DUF2564)     
BBJ33_RS10665	PF10782	Zinc-finger
BBJ33_RS10670	PF13456	Reverse transcriptase-like
BBJ33_RS10675	PF02592	Putative vitamin uptake transporter
BBJ33_RS10680	PF13456	Reverse transcriptase-like
BBJ33_RS10690	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
BBJ33_RS10690	PF01367	5'-3' exonuclease, C-terminal SAM fold
BBJ33_RS10695	PF10752	Protein of unknown function (DUF2533) 
BBJ33_RS10700	PF00350	Dynamin family
BBJ33_RS10705	PF04140	Isoprenylcysteine carboxyl methyltransferase (ICMT) family 
BBJ33_RS10710	PF02797	Chalcone and stilbene synthases, C-terminal domain
BBJ33_RS10710	PF00195	Chalcone and stilbene synthases, N-terminal domain
BBJ33_RS10735	PF00857	Isochorismatase family
BBJ33_RS10745	PF00860	Permease family
BBJ33_RS10750	PF00156	Phosphoribosyl transferase domain
BBJ33_RS10755	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
BBJ33_RS10760	PF13307	Helicase C-terminal domain
BBJ33_RS10770	PF14139	YpzG-like protein
BBJ33_RS10775	PF02926	THUMP domain
BBJ33_RS10775	PF01170	Putative RNA methylase family UPF0020
BBJ33_RS10785	PF05103	DivIVA protein
BBJ33_RS10790	PF06908	YspA SLOG family
BBJ33_RS10795	PF13482	RNase_H superfamily
BBJ33_RS10800	PF00270	DEAD/DEAH box helicase
BBJ33_RS10800	PF09369	Domain of unknown function (DUF1998)
BBJ33_RS10800	PF00271	Helicase conserved C-terminal domain
BBJ33_RS10805	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BBJ33_RS10815	PF14179	YppG-like protein
BBJ33_RS10820	PF14178	YppF-like protein
BBJ33_RS10825	PF08807	Bacterial domain of unknown function (DUF1798)
BBJ33_RS10830	PF17522	Family of unknown function (DUF5446)
BBJ33_RS10840	PF10720	Protein of unknown function (DUF2515)
BBJ33_RS10845	PF03838	Recombination protein U
BBJ33_RS10850	PF00912	Transglycosylase
BBJ33_RS10850	PF00905	Penicillin binding protein transpeptidase domain
BBJ33_RS10860	PF00730	HhH-GPD superfamily base excision DNA repair protein
BBJ33_RS10860	PF00633	Helix-hairpin-helix motif
BBJ33_RS10860	PF10576	Iron-sulfur binding domain of endonuclease III
BBJ33_RS10865	PF07261	Replication initiation and membrane attachment
BBJ33_RS10870	PF00152	tRNA synthetases class II (D, K and N) 
BBJ33_RS10870	PF01336	OB-fold nucleic acid binding domain
BBJ33_RS10875	PF00155	Aminotransferase class I and II
BBJ33_RS10880	PF17881	Domain of unknown function (DUF5590)
BBJ33_RS10880	PF03413	Peptidase propeptide and YPEB domain
BBJ33_RS10885	PF14084	Protein of unknown function (DUF4264)
BBJ33_RS10890	PF04851	Type III restriction enzyme, res subunit
BBJ33_RS10890	PF00929	Exonuclease
BBJ33_RS10890	PF13307	Helicase C-terminal domain
BBJ33_RS10895	PF02261	Aspartate decarboxylase
BBJ33_RS10900	PF02569	Pantoate-beta-alanine ligase
BBJ33_RS10905	PF02548	Ketopantoate hydroxymethyltransferase
BBJ33_RS10910	PF02237	Biotin protein ligase C terminal domain
BBJ33_RS10910	PF08279	HTH domain
BBJ33_RS10910	PF03099	Biotin/lipoate A/B protein ligase family
BBJ33_RS10915	PF12627	Probable RNA and SrmB- binding site of polymerase A
BBJ33_RS10915	PF01743	Poly A polymerase head domain
BBJ33_RS10915	PF13735	tRNA nucleotidyltransferase domain 2 putative
BBJ33_RS10920	PF00534	Glycosyl transferases group 1
BBJ33_RS10920	PF13439	Glycosyltransferase Family 4
BBJ33_RS10925	PF02585	GlcNAc-PI de-N-acetylase
BBJ33_RS10930	PF02142	MGS-like domain
BBJ33_RS10935	PF05173	Dihydrodipicolinate reductase, C-terminus
BBJ33_RS10935	PF01113	Dihydrodipicolinate reductase, N-terminus
BBJ33_RS10940	PF03819	MazG nucleotide pyrophosphohydrolase domain
BBJ33_RS10945	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BBJ33_RS10945	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BBJ33_RS10950	PF00190	Cupin
BBJ33_RS10955	PF09577	Sporulation protein YpjB (SpoYpjB)
BBJ33_RS10960	PF07187	Protein of unknown function (DUF1405)
BBJ33_RS10965	PF00032	Cytochrome b(C-terminal)/b6/petD
BBJ33_RS10965	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
BBJ33_RS10970	PF00033	Cytochrome b/b6/petB
BBJ33_RS10975	PF00355	Rieske [2Fe-2S] domain
BBJ33_RS10980	PF10673	Protein of unknown function (DUF2487)
BBJ33_RS10985	PF08858	IDEAL domain
BBJ33_RS10985	PF08864	UPF0302 domain
BBJ33_RS10995	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
BBJ33_RS11000	PF01842	ACT domain
BBJ33_RS11000	PF02153	Prephenate dehydrogenase
BBJ33_RS11005	PF00155	Aminotransferase class I and II
BBJ33_RS11010	PF00290	Tryptophan synthase alpha chain
BBJ33_RS11015	PF00291	Pyridoxal-phosphate dependent enzyme
BBJ33_RS11020	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
BBJ33_RS11025	PF00218	Indole-3-glycerol phosphate synthase
BBJ33_RS11030	PF00591	Glycosyl transferase family, a/b domain
BBJ33_RS11030	PF02885	Glycosyl transferase family, helical bundle domain
BBJ33_RS11035	PF04715	Anthranilate synthase component I, N terminal region
BBJ33_RS11035	PF00425	chorismate binding enzyme
BBJ33_RS11040	PF07736	Chorismate mutase type I
BBJ33_RS11045	PF01761	3-dehydroquinate synthase
BBJ33_RS11050	PF01264	Chorismate synthase
BBJ33_RS11055	PF01739	CheR methyltransferase, SAM binding domain
BBJ33_RS11055	PF03705	CheR methyltransferase, all-alpha domain
BBJ33_RS11060	PF00334	Nucleoside diphosphate kinase
BBJ33_RS11065	PF00348	Polyprenyl synthetase
BBJ33_RS11070	PF01209	ubiE/COQ5 methyltransferase family
BBJ33_RS11075	PF07307	Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
BBJ33_RS11080	PF02081	Tryptophan RNA-binding attenuator protein
BBJ33_RS11085	PF01227	GTP cyclohydrolase I
BBJ33_RS11090	PF00216	Bacterial DNA-binding protein
BBJ33_RS11095	PF09547	Stage IV sporulation protein A (spore_IV_A)
BBJ33_RS11105	PF10966	Protein of unknown function (DUF2768)
BBJ33_RS11110	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
BBJ33_RS11110	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
BBJ33_RS11115	PF01926	50S ribosome-binding GTPase
BBJ33_RS11115	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
BBJ33_RS11125	PF14140	YpzI-like protein
BBJ33_RS11130	PF01070	FMN-dependent dehydrogenase
BBJ33_RS11135	PF00575	S1 RNA binding domain
BBJ33_RS11140	PF02224	Cytidylate kinase
BBJ33_RS11145	PF07238	PilZ domain
BBJ33_RS11145	PF12945	Flagellar protein YcgR
BBJ33_RS11150	PF14620	YpeB sporulation
BBJ33_RS11150	PF03413	Peptidase propeptide and YPEB domain
BBJ33_RS11155	PF01471	Putative peptidoglycan binding domain
BBJ33_RS11155	PF07486	Cell Wall Hydrolase
BBJ33_RS11160	PF13367	PrsW family intramembrane metalloprotease
BBJ33_RS11170	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BBJ33_RS11170	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
BBJ33_RS11175	PF05389	Negative regulator of genetic competence (MecA)
BBJ33_RS11180	PF00149	Calcineurin-like phosphoesterase
BBJ33_RS11185	PF10864	Protein of unknown function (DUF2663)
BBJ33_RS11190	PF01476	LysM domain
BBJ33_RS11195	PF02517	CPBP intramembrane metalloprotease
BBJ33_RS11200	PF00270	DEAD/DEAH box helicase
BBJ33_RS11200	PF00271	Helicase conserved C-terminal domain
BBJ33_RS11205	PF14493	Helix-turn-helix domain
BBJ33_RS11215	PF12822	ECF transporter, substrate-specific component
BBJ33_RS11220	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BBJ33_RS11220	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BBJ33_RS11220	PF01842	ACT domain
BBJ33_RS11230	PF08281	Sigma-70, region 4
BBJ33_RS11230	PF04542	Sigma-70 region 2 
BBJ33_RS11235	PF00512	His Kinase A (phospho-acceptor) domain
BBJ33_RS11235	PF18698	Histidine kinase sensor domain
BBJ33_RS11235	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS11235	PF00989	PAS fold
BBJ33_RS11235	PF00672	HAMP domain
BBJ33_RS11240	PF00072	Response regulator receiver domain
BBJ33_RS11240	PF00486	Transcriptional regulatory protein, C terminal
BBJ33_RS11245	PF01578	Cytochrome C assembly protein
BBJ33_RS11250	PF05140	ResB-like family 
BBJ33_RS11255	PF00578	AhpC/TSA family
BBJ33_RS11260	PF00849	RNA pseudouridylate synthase
BBJ33_RS11260	PF01479	S4 domain
BBJ33_RS11265	PF07670	Nucleoside recognition
BBJ33_RS11270	PF07670	Nucleoside recognition
BBJ33_RS11275	PF00768	D-alanyl-D-alanine carboxypeptidase
BBJ33_RS11275	PF07943	Penicillin-binding protein 5, C-terminal domain
BBJ33_RS11280	PF13047	Protein of unknown function (DUF3907)
BBJ33_RS11285	PF04079	Segregation and condensation complex subunit ScpB
BBJ33_RS11290	PF02616	Segregation and condensation protein ScpA
BBJ33_RS11295	PF03745	Domain of unknown function (DUF309)
BBJ33_RS11300	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS11305	PF00885	6,7-dimethyl-8-ribityllumazine synthase
BBJ33_RS11310	PF00925	GTP cyclohydrolase II
BBJ33_RS11310	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
BBJ33_RS11315	PF00677	Lumazine binding domain
BBJ33_RS11320	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BBJ33_RS11320	PF01872	RibD C-terminal domain
BBJ33_RS11330	PF10502	Signal peptidase, peptidase S26 
BBJ33_RS11340	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
BBJ33_RS11345	PF06207	Protein of unknown function (DUF1002)
BBJ33_RS11350	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
BBJ33_RS11350	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
BBJ33_RS11355	PF03323	Bacillus/Clostridium GerA spore germination protein
BBJ33_RS11360	PF14097	Stage V sporulation protein AE1
BBJ33_RS11365	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
BBJ33_RS11370	PF07451	Stage V sporulation protein AD (SpoVAD)
BBJ33_RS11375	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
BBJ33_RS11380	PF13782	Stage V sporulation protein AB
BBJ33_RS11385	PF12164	Stage V sporulation protein AA
BBJ33_RS11390	PF04539	Sigma-70 region 3
BBJ33_RS11390	PF04545	Sigma-70, region 4
BBJ33_RS11390	PF04542	Sigma-70 region 2 
BBJ33_RS11395	PF13581	Histidine kinase-like ATPase domain
BBJ33_RS11400	PF01740	STAS domain
BBJ33_RS11405	PF07943	Penicillin-binding protein 5, C-terminal domain
BBJ33_RS11405	PF00768	D-alanyl-D-alanine carboxypeptidase
BBJ33_RS11410	PF01048	Phosphorylase superfamily
BBJ33_RS11415	PF01676	Metalloenzyme superfamily
BBJ33_RS11420	PF02899	Phage integrase, N-terminal SAM-like domain
BBJ33_RS11420	PF00589	Phage integrase family
BBJ33_RS11425	PF14004	Protein of unknown function (DUF4227)
BBJ33_RS11430	PF01475	Ferric uptake regulator family
BBJ33_RS11435	PF01944	Stage II sporulation protein M
BBJ33_RS11450	PF03949	Malic enzyme, NAD binding domain
BBJ33_RS11450	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BBJ33_RS11450	PF00390	Malic enzyme, N-terminal domain
BBJ33_RS11455	PF03553	Na+/H+ antiporter family
BBJ33_RS11460	PF10415	Fumarase C C-terminus
BBJ33_RS11460	PF00206	Lyase
BBJ33_RS11465	PF00710	Asparaginase, N-terminal
BBJ33_RS11465	PF17763	Glutaminase/Asparaginase C-terminal domain
BBJ33_RS11470	PF01381	Helix-turn-helix
BBJ33_RS11480	PF00293	NUDIX domain
BBJ33_RS11485	PF13072	Mother cell inhibitor of FtsZ
BBJ33_RS11490	PF00248	Aldo/keto reductase family
BBJ33_RS11500	PF12146	Serine aminopeptidase, S33
BBJ33_RS11505	PF10827	Protein of unknown function (DUF2552) 
BBJ33_RS11510	PF01521	Iron-sulphur cluster biosynthesis
BBJ33_RS11515	PF13673	Acetyltransferase (GNAT) domain
BBJ33_RS11515	PF04229	GrpB protein
BBJ33_RS11520	PF03992	Antibiotic biosynthesis monooxygenase
BBJ33_RS11525	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS11530	PF11799	impB/mucB/samB family C-terminal domain
BBJ33_RS11530	PF00817	impB/mucB/samB family
BBJ33_RS11535	PF08863	YolD-like protein
BBJ33_RS11540	PF14164	YqzH-like protein
BBJ33_RS11545	PF01594	AI-2E family transporter
BBJ33_RS11555	PF00485	Phosphoribulokinase / Uridine kinase family
BBJ33_RS11560	PF00291	Pyridoxal-phosphate dependent enzyme
BBJ33_RS11565	PF00106	short chain dehydrogenase
BBJ33_RS11570	PF00753	Metallo-beta-lactamase superfamily
BBJ33_RS11575	PF03807	NADP oxidoreductase coenzyme F420-dependent
BBJ33_RS11575	PF14748	Pyrroline-5-carboxylate reductase dimerisation
BBJ33_RS11580	PF00378	Enoyl-CoA hydratase/isomerase
BBJ33_RS11585	PF01154	Hydroxymethylglutaryl-coenzyme A synthase N terminal
BBJ33_RS11585	PF08540	Hydroxymethylglutaryl-coenzyme A synthase C terminal
BBJ33_RS11590	PF00067	Cytochrome P450
BBJ33_RS11595	PF14765	Polyketide synthase dehydratase
BBJ33_RS11595	PF08659	KR domain
BBJ33_RS11595	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS11595	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS11595	PF08242	Methyltransferase domain
BBJ33_RS11595	PF00550	Phosphopantetheine attachment site
BBJ33_RS11595	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS11600	PF08659	KR domain
BBJ33_RS11600	PF14765	Polyketide synthase dehydratase
BBJ33_RS11600	PF08242	Methyltransferase domain
BBJ33_RS11600	PF00550	Phosphopantetheine attachment site
BBJ33_RS11600	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS11600	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS11600	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS11605	PF00501	AMP-binding enzyme
BBJ33_RS11605	PF00668	Condensation domain
BBJ33_RS11605	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS11605	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS11605	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS11605	PF14765	Polyketide synthase dehydratase
BBJ33_RS11605	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS11605	PF00550	Phosphopantetheine attachment site
BBJ33_RS11605	PF08659	KR domain
BBJ33_RS11610	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS11610	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS11610	PF08659	KR domain
BBJ33_RS11610	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS11610	PF00550	Phosphopantetheine attachment site
BBJ33_RS11610	PF14765	Polyketide synthase dehydratase
BBJ33_RS11610	PF00668	Condensation domain
BBJ33_RS11610	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS11610	PF00501	AMP-binding enzyme
BBJ33_RS11615	PF08242	Methyltransferase domain
BBJ33_RS11615	PF14765	Polyketide synthase dehydratase
BBJ33_RS11615	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS11615	PF08659	KR domain
BBJ33_RS11615	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS11615	PF00550	Phosphopantetheine attachment site
BBJ33_RS11615	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS11620	PF14765	Polyketide synthase dehydratase
BBJ33_RS11620	PF00550	Phosphopantetheine attachment site
BBJ33_RS11620	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS11620	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS11620	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS11620	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS11620	PF00501	AMP-binding enzyme
BBJ33_RS11620	PF08659	KR domain
BBJ33_RS11620	PF00668	Condensation domain
BBJ33_RS11625	PF16197	Ketoacyl-synthetase C-terminal extension
BBJ33_RS11625	PF00109	Beta-ketoacyl synthase, N-terminal domain
BBJ33_RS11625	PF08659	KR domain
BBJ33_RS11625	PF08242	Methyltransferase domain
BBJ33_RS11625	PF00550	Phosphopantetheine attachment site
BBJ33_RS11625	PF14765	Polyketide synthase dehydratase
BBJ33_RS11625	PF02801	Beta-ketoacyl synthase, C-terminal domain
BBJ33_RS11635	PF00501	AMP-binding enzyme
BBJ33_RS11635	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS11650	PF00698	Acyl transferase domain
BBJ33_RS11650	PF03060	Nitronate monooxygenase
BBJ33_RS11655	PF02357	Transcription termination factor nusG
BBJ33_RS11655	PF00467	KOW motif
BBJ33_RS11665	PF03466	LysR substrate binding domain
BBJ33_RS11665	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BBJ33_RS11675	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
BBJ33_RS11680	PF12146	Serine aminopeptidase, S33
BBJ33_RS11685	PF00471	Ribosomal protein L33
BBJ33_RS11690	PF12706	Beta-lactamase superfamily domain
BBJ33_RS11695	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
BBJ33_RS11695	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
BBJ33_RS11700	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BBJ33_RS11700	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
BBJ33_RS11705	PF00817	impB/mucB/samB family
BBJ33_RS11705	PF11798	IMS family HHH motif
BBJ33_RS11705	PF11799	impB/mucB/samB family C-terminal domain
BBJ33_RS11715	PF02096	60Kd inner membrane protein
BBJ33_RS11720	PF07687	Peptidase dimerisation domain
BBJ33_RS11720	PF01546	Peptidase family M20/M25/M40
BBJ33_RS11725	PF01039	Carboxyl transferase domain
BBJ33_RS11735	PF03734	L,D-transpeptidase catalytic domain
BBJ33_RS11740	PF06081	Aromatic acid exporter family member 1
BBJ33_RS11740	PF11728	Putative aromatic acid exporter C-terminal domain
BBJ33_RS11745	PF00005	ABC transporter
BBJ33_RS11750	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS11755	PF00497	Bacterial extracellular solute-binding proteins, family 3
BBJ33_RS11760	PF06491	Disulphide isomerase
BBJ33_RS11765	PF00781	Diacylglycerol kinase catalytic domain
BBJ33_RS11770	PF02817	e3 binding domain
BBJ33_RS11770	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BBJ33_RS11770	PF00364	Biotin-requiring enzyme
BBJ33_RS11775	PF02780	Transketolase, C-terminal domain
BBJ33_RS11775	PF02779	Transketolase, pyrimidine binding domain
BBJ33_RS11780	PF00676	Dehydrogenase E1 component
BBJ33_RS11785	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BBJ33_RS11785	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BBJ33_RS11790	PF00871	Acetokinase family
BBJ33_RS11795	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
BBJ33_RS11795	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BBJ33_RS11800	PF01515	Phosphate acetyl/butaryl transferase
BBJ33_RS11805	PF00989	PAS fold
BBJ33_RS11805	PF02954	Bacterial regulatory protein, Fis family
BBJ33_RS11805	PF00158	Sigma-54 interaction domain
BBJ33_RS11810	PF11118	Protein of unknown function (DUF2627)
BBJ33_RS11820	PF03972	MmgE/PrpD family
BBJ33_RS11825	PF00285	Citrate synthase, C-terminal domain
BBJ33_RS11830	PF02770	Acyl-CoA dehydrogenase, middle domain
BBJ33_RS11830	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BBJ33_RS11830	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BBJ33_RS11835	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
BBJ33_RS11835	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
BBJ33_RS11840	PF02803	Thiolase, C-terminal domain
BBJ33_RS11840	PF00108	Thiolase, N-terminal domain
BBJ33_RS11845	PF03009	Glycerophosphoryl diester phosphodiesterase family
BBJ33_RS11850	PF01520	N-acetylmuramoyl-L-alanine amidase
BBJ33_RS11875	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
BBJ33_RS11880	PF10676	Spore germination protein gerPA/gerPF
BBJ33_RS11885	PF10676	Spore germination protein gerPA/gerPF
BBJ33_RS11890	PF00842	Alanine racemase, C-terminal domain
BBJ33_RS11890	PF01168	Alanine racemase, N-terminal domain
BBJ33_RS11895	PF08769	Sporulation initiation factor Spo0A C terminal
BBJ33_RS11895	PF00072	Response regulator receiver domain
BBJ33_RS11900	PF05580	SpoIVB peptidase S55
BBJ33_RS11900	PF17820	PDZ domain
BBJ33_RS11905	PF13476	AAA domain
BBJ33_RS11910	PF01316	Arginine repressor, DNA binding domain
BBJ33_RS11910	PF02863	Arginine repressor, C-terminal domain
BBJ33_RS11915	PF01479	S4 domain
BBJ33_RS11915	PF01728	FtsJ-like methyltransferase
BBJ33_RS11920	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
BBJ33_RS11920	PF02779	Transketolase, pyrimidine binding domain
BBJ33_RS11920	PF02780	Transketolase, C-terminal domain
BBJ33_RS11925	PF00348	Polyprenyl synthetase
BBJ33_RS11930	PF02609	Exonuclease VII small subunit
BBJ33_RS11935	PF02601	Exonuclease VII, large subunit
BBJ33_RS11935	PF13742	OB-fold nucleic acid binding domain
BBJ33_RS11940	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
BBJ33_RS11940	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
BBJ33_RS11945	PF01029	NusB family
BBJ33_RS11950	PF03780	Asp23 family, cell envelope-related function
BBJ33_RS11955	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BBJ33_RS11955	PF00289	Biotin carboxylase, N-terminal domain
BBJ33_RS11955	PF02785	Biotin carboxylase C-terminal domain
BBJ33_RS11960	PF00364	Biotin-requiring enzyme
BBJ33_RS11965	PF12685	SpoIIIAH-like protein
BBJ33_RS11975	PF09581	Stage III sporulation protein AF (Spore_III_AF)
BBJ33_RS11980	PF09546	Stage III sporulation protein AE (spore_III_AE)
BBJ33_RS11985	PF06686	Stage III sporulation protein AC/AD protein family
BBJ33_RS11990	PF06686	Stage III sporulation protein AC/AD protein family
BBJ33_RS11995	PF09548	Stage III sporulation protein AB (spore_III_AB)
BBJ33_RS12005	PF10942	Protein of unknown function (DUF2619)
BBJ33_RS12010	PF09285	Elongation factor P, C-terminal
BBJ33_RS12010	PF08207	Elongation factor P (EF-P) KOW-like domain
BBJ33_RS12010	PF01132	Elongation factor P (EF-P) OB domain
BBJ33_RS12015	PF01321	Creatinase/Prolidase N-terminal domain
BBJ33_RS12015	PF00557	Metallopeptidase family M24
BBJ33_RS12020	PF11085	Conserved membrane protein YqhR
BBJ33_RS12025	PF07136	Protein of unknown function (DUF1385)
BBJ33_RS12035	PF01734	Patatin-like phospholipase
BBJ33_RS12040	PF01325	Iron dependent repressor, N-terminal DNA binding domain
BBJ33_RS12040	PF02742	Iron dependent repressor, metal binding and dimerisation domain
BBJ33_RS12045	PF03099	Biotin/lipoate A/B protein ligase family
BBJ33_RS12050	PF00581	Rhodanese-like domain
BBJ33_RS12055	PF02347	Glycine cleavage system P-protein
BBJ33_RS12060	PF02347	Glycine cleavage system P-protein
BBJ33_RS12065	PF08669	Glycine cleavage T-protein C-terminal barrel domain
BBJ33_RS12065	PF01571	Aminomethyltransferase folate-binding domain
BBJ33_RS12070	PF00176	SNF2 family N-terminal domain
BBJ33_RS12070	PF00271	Helicase conserved C-terminal domain
BBJ33_RS12075	PF11079	Bacterial protein YqhG of unknown function
BBJ33_RS12080	PF08671	Anti-repressor SinI
BBJ33_RS12085	PF01381	Helix-turn-helix
BBJ33_RS12085	PF08671	Anti-repressor SinI
BBJ33_RS12090	PF12389	Camelysin metallo-endopeptidase
BBJ33_RS12105	PF13028	Protein of unknown function (DUF3889)
BBJ33_RS12110	PF14038	YqzE-like protein
BBJ33_RS12115	PF14173	ComG operon protein 7
BBJ33_RS12120	PF15980	Putative Competence protein ComGF
BBJ33_RS12130	PF07963	Prokaryotic N-terminal methylation motif
BBJ33_RS12135	PF07963	Prokaryotic N-terminal methylation motif
BBJ33_RS12140	PF00482	Type II secretion system (T2SS), protein F
BBJ33_RS12145	PF00437	Type II/IV secretion system protein
BBJ33_RS12150	PF01544	CorA-like Mg2+ transporter protein
BBJ33_RS12155	PF01595	Cyclin M transmembrane N-terminal domain
BBJ33_RS12155	PF00571	CBS domain
BBJ33_RS12155	PF03471	Transporter associated domain
BBJ33_RS12160	PF01740	STAS domain
BBJ33_RS12160	PF14361	RsbT co-antagonist protein rsbRD N-terminal domain
BBJ33_RS12170	PF03960	ArsC family
BBJ33_RS12175	PF11117	Protein of unknown function (DUF2626)
BBJ33_RS12180	PF00753	Metallo-beta-lactamase superfamily
BBJ33_RS12185	PF10958	Protein of unknown function (DUF2759)
BBJ33_RS12190	PF01910	Thiamine-binding protein
BBJ33_RS12200	PF00246	Zinc carboxypeptidase
BBJ33_RS12205	PF00480	ROK family
BBJ33_RS12210	PF06014	Bacterial protein of unknown function (DUF910)
BBJ33_RS12215	PF03553	Na+/H+ antiporter family
BBJ33_RS12220	PF01812	5-formyltetrahydrofolate cyclo-ligase family
BBJ33_RS12235	PF00005	ABC transporter
BBJ33_RS12240	PF00005	ABC transporter
BBJ33_RS12245	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS12250	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS12255	PF12849	PBP superfamily domain
BBJ33_RS12260	PF03717	Penicillin-binding Protein dimerisation domain
BBJ33_RS12260	PF00905	Penicillin binding protein transpeptidase domain
BBJ33_RS12265	PF07690	Major Facilitator Superfamily
BBJ33_RS12270	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
BBJ33_RS12270	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
BBJ33_RS12275	PF04306	Protein of unknown function (DUF456)
BBJ33_RS12280	PF06691	Protein of unknown function (DUF1189)
BBJ33_RS12290	PF04551	GcpE protein
BBJ33_RS12305	PF01475	Ferric uptake regulator family
BBJ33_RS12310	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BBJ33_RS12310	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BBJ33_RS12315	PF11116	Protein of unknown function (DUF2624)
BBJ33_RS12320	PF01261	Xylose isomerase-like TIM barrel
BBJ33_RS12325	PF00271	Helicase conserved C-terminal domain
BBJ33_RS12325	PF00270	DEAD/DEAH box helicase
BBJ33_RS12330	PF14181	YqfQ-like protein
BBJ33_RS12335	PF02401	LytB protein
BBJ33_RS12340	PF01784	NIF3 (NGG1p interacting factor 3)
BBJ33_RS12345	PF04816	tRNA (adenine(22)-N(1))-methyltransferase
BBJ33_RS12350	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
BBJ33_RS12355	PF03979	Sigma-70 factor, region 1.1
BBJ33_RS12355	PF00140	Sigma-70 factor, region 1.2
BBJ33_RS12355	PF04542	Sigma-70 region 2 
BBJ33_RS12355	PF04539	Sigma-70 region 3
BBJ33_RS12355	PF04545	Sigma-70, region 4
BBJ33_RS12360	PF10410	DnaB-helicase binding domain of primase
BBJ33_RS12360	PF08275	DNA primase catalytic core, N-terminal domain
BBJ33_RS12360	PF01807	CHC2 zinc finger
BBJ33_RS12365	PF02639	Uncharacterized BCR, YaiI/YqxD family COG1671
BBJ33_RS12370	PF03618	Kinase/pyrophosphorylase
BBJ33_RS12375	PF08279	HTH domain
BBJ33_RS12375	PF00571	CBS domain
BBJ33_RS12380	PF02092	Glycyl-tRNA synthetase beta subunit
BBJ33_RS12385	PF02091	Glycyl-tRNA synthetase alpha subunit
BBJ33_RS12390	PF11967	Recombination protein O N terminal
BBJ33_RS12390	PF02565	Recombination protein O C terminal
BBJ33_RS12395	PF14006	YqzL-like protein
BBJ33_RS12400	PF07650	KH domain
BBJ33_RS12400	PF01926	50S ribosome-binding GTPase
BBJ33_RS12405	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BBJ33_RS12410	PF01219	Prokaryotic diacylglycerol kinase
BBJ33_RS12415	PF02130	Uncharacterized protein family UPF0054
BBJ33_RS12420	PF07697	7TM-HD extracellular
BBJ33_RS12420	PF01966	HD domain
BBJ33_RS12420	PF07698	7TM receptor with intracellular HD hydrolase
BBJ33_RS12425	PF02562	PhoH-like protein
BBJ33_RS12430	PF06898	Putative stage IV sporulation protein YqfD
BBJ33_RS12435	PF07873	YabP family
BBJ33_RS12445	PF12127	SigmaW regulon antibacterial
BBJ33_RS12450	PF01972	Serine dehydrogenase proteinase
BBJ33_RS12450	PF01957	NfeD-like C-terminal, partner-binding
BBJ33_RS12455	PF09424	Yqey-like protein
BBJ33_RS12460	PF01165	Ribosomal protein S21
BBJ33_RS12465	PF02690	Na+/Pi-cotransporter
BBJ33_RS12470	PF04055	Radical SAM superfamily
BBJ33_RS12470	PF01938	TRAM domain
BBJ33_RS12470	PF00919	Uncharacterized protein family UPF0004
BBJ33_RS12475	PF04452	RNA methyltransferase
BBJ33_RS12485	PF00684	DnaJ central domain
BBJ33_RS12485	PF01556	DnaJ C terminal domain
BBJ33_RS12485	PF00226	DnaJ domain
BBJ33_RS12490	PF00012	Hsp70 protein
BBJ33_RS12495	PF01025	GrpE
BBJ33_RS12500	PF01628	HrcA protein C terminal domain
BBJ33_RS12505	PF04055	Radical SAM superfamily
BBJ33_RS12505	PF06969	HemN C-terminal domain
BBJ33_RS12510	PF00679	Elongation factor G C-terminus
BBJ33_RS12510	PF00009	Elongation factor Tu GTP binding domain
BBJ33_RS12510	PF06421	GTP-binding protein LepA C-terminus
BBJ33_RS12510	PF03144	Elongation factor Tu domain 2
BBJ33_RS12515	PF12438	Protein of unknown function (DUF3679) 
BBJ33_RS12520	PF07454	Stage II sporulation protein P (SpoIIP)
BBJ33_RS12525	PF03418	Germination protease
BBJ33_RS12530	PF01649	Ribosomal protein S20
BBJ33_RS12535	PF06144	DNA polymerase III, delta subunit
BBJ33_RS12540	PF14141	YqzM-like protein
BBJ33_RS12545	PF13567	Domain of unknown function (DUF4131)
BBJ33_RS12545	PF03772	Competence protein
BBJ33_RS12545	PF00753	Metallo-beta-lactamase superfamily
BBJ33_RS12550	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BBJ33_RS12555	PF10531	SLBB domain
BBJ33_RS12560	PF03807	NADP oxidoreductase coenzyme F420-dependent
BBJ33_RS12560	PF14748	Pyrroline-5-carboxylate reductase dimerisation
BBJ33_RS12565	PF13649	Methyltransferase domain
BBJ33_RS12575	PF01966	HD domain
BBJ33_RS12580	PF01467	Cytidylyltransferase-like
BBJ33_RS12585	PF01985	CRS1 / YhbY (CRM) domain
BBJ33_RS12590	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
BBJ33_RS12590	PF08501	Shikimate dehydrogenase substrate binding domain
BBJ33_RS12590	PF01488	Shikimate / quinate 5-dehydrogenase
BBJ33_RS12595	PF01926	50S ribosome-binding GTPase
BBJ33_RS12605	PF08970	Sporulation inhibitor A
BBJ33_RS12610	PF00657	GDSL-like Lipase/Acylhydrolase
BBJ33_RS12615	PF01522	Polysaccharide deacetylase
BBJ33_RS12620	PF09335	SNARE associated Golgi protein
BBJ33_RS12630	PF04545	Sigma-70, region 4
BBJ33_RS12630	PF04542	Sigma-70 region 2 
BBJ33_RS12645	PF12833	Helix-turn-helix domain
BBJ33_RS12645	PF06445	GyrI-like small molecule binding domain
BBJ33_RS12660	PF07690	Major Facilitator Superfamily
BBJ33_RS12665	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS12670	PF05163	DinB family
BBJ33_RS12690	PF01380	SIS domain
BBJ33_RS12690	PF01418	Helix-turn-helix domain, rpiR family
BBJ33_RS12695	PF01238	Phosphomannose isomerase type I
BBJ33_RS12700	PF02378	Phosphotransferase system, EIIC 
BBJ33_RS12700	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BBJ33_RS12700	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BBJ33_RS12705	PF00874	PRD domain
BBJ33_RS12705	PF05043	Mga helix-turn-helix domain
BBJ33_RS12705	PF08279	HTH domain
BBJ33_RS12705	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BBJ33_RS12710	PF12706	Beta-lactamase superfamily domain
BBJ33_RS12715	PF04073	Aminoacyl-tRNA editing domain
BBJ33_RS12720	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BBJ33_RS12720	PF03466	LysR substrate binding domain
BBJ33_RS12725	PF07690	Major Facilitator Superfamily
BBJ33_RS12730	PF00667	FAD binding domain
BBJ33_RS12730	PF00258	Flavodoxin
BBJ33_RS12730	PF00175	Oxidoreductase NAD-binding domain 
BBJ33_RS12730	PF00067	Cytochrome P450
BBJ33_RS12735	PF16295	Tetracyclin repressor-like, C-terminal domain
BBJ33_RS12735	PF00440	Bacterial regulatory proteins, tetR family
BBJ33_RS12740	PF08241	Methyltransferase domain
BBJ33_RS12745	PF09501	Probable sporulation protein (Bac_small_yrzI)
BBJ33_RS12755	PF01226	Formate/nitrite transporter
BBJ33_RS12760	PF10057	Uncharacterized conserved protein (DUF2294)
BBJ33_RS12765	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
BBJ33_RS12765	PF00384	Molybdopterin oxidoreductase
BBJ33_RS12765	PF01568	Molydopterin dinucleotide binding domain
BBJ33_RS12765	PF00037	4Fe-4S binding domain
BBJ33_RS12765	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BBJ33_RS12770	PF07849	Protein of unknown function (DUF1641)
BBJ33_RS12775	PF14143	YrhC-like protein
BBJ33_RS12780	PF01053	Cys/Met metabolism PLP-dependent enzyme
BBJ33_RS12785	PF00291	Pyridoxal-phosphate dependent enzyme
BBJ33_RS12790	PF01048	Phosphorylase superfamily
BBJ33_RS12795	PF13649	Methyltransferase domain
BBJ33_RS12800	PF10750	Protein of unknown function (DUF2536)
BBJ33_RS12805	PF07423	Domain of unknown function (DUF1510)
BBJ33_RS12810	PF00905	Penicillin binding protein transpeptidase domain
BBJ33_RS12810	PF03717	Penicillin-binding Protein dimerisation domain
BBJ33_RS12815	PF01272	Transcription elongation factor, GreA/GreB, C-term
BBJ33_RS12815	PF03449	Transcription elongation factor, N-terminal
BBJ33_RS12820	PF00485	Phosphoribulokinase / Uridine kinase family
BBJ33_RS12825	PF16325	Peptidase family U32 C-terminal domain
BBJ33_RS12825	PF01136	Peptidase family U32
BBJ33_RS12830	PF01136	Peptidase family U32
BBJ33_RS12835	PF01596	O-methyltransferase
BBJ33_RS12840	PF02618	YceG-like family
BBJ33_RS12845	PF06949	Protein of unknown function (DUF1292)
BBJ33_RS12850	PF03652	Holliday junction resolvase
BBJ33_RS12855	PF06135	IreB regulatory phosphoprotein
BBJ33_RS12860	PF01411	tRNA synthetases class II (A)
BBJ33_RS12860	PF02272	DHHA1 domain
BBJ33_RS12860	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BBJ33_RS12865	PF01594	AI-2E family transporter
BBJ33_RS12870	PF00005	ABC transporter
BBJ33_RS12875	PF00497	Bacterial extracellular solute-binding proteins, family 3
BBJ33_RS12880	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS12885	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS12890	PF13056	Protein of unknown function (DUF3918)
BBJ33_RS12900	PF05239	PRC-barrel domain
BBJ33_RS12905	PF13538	UvrD-like helicase C-terminal domain
BBJ33_RS12905	PF14490	Helix-hairpin-helix containing domain
BBJ33_RS12905	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
BBJ33_RS12910	PF13181	Tetratricopeptide repeat
BBJ33_RS12910	PF07719	Tetratricopeptide repeat
BBJ33_RS12920	PF00266	Aminotransferase class-V
BBJ33_RS12925	PF02082	Transcriptional regulator
BBJ33_RS12930	PF12002	MgsA AAA+ ATPase C terminal
BBJ33_RS12930	PF05496	Holliday junction DNA helicase RuvB P-loop domain
BBJ33_RS12930	PF16193	AAA C-terminal domain
BBJ33_RS12935	PF00899	ThiF family
BBJ33_RS12945	PF01336	OB-fold nucleic acid binding domain
BBJ33_RS12945	PF00152	tRNA synthetases class II (D, K and N) 
BBJ33_RS12945	PF02938	GAD domain
BBJ33_RS12950	PF13393	Histidyl-tRNA synthetase
BBJ33_RS12950	PF03129	Anticodon binding domain
BBJ33_RS12955	PF08239	Bacterial SH3 domain
BBJ33_RS12955	PF01520	N-acetylmuramoyl-L-alanine amidase
BBJ33_RS12960	PF02580	D-Tyr-tRNA(Tyr) deacylase
BBJ33_RS12965	PF02824	TGS domain
BBJ33_RS12965	PF04607	Region found in RelA / SpoT proteins
BBJ33_RS12965	PF13291	ACT domain
BBJ33_RS12970	PF00156	Phosphoribosyl transferase domain
BBJ33_RS12975	PF17768	RecJ OB domain
BBJ33_RS12975	PF02272	DHHA1 domain
BBJ33_RS12975	PF01368	DHH family
BBJ33_RS12975	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
BBJ33_RS12980	PF06305	Lipopolysaccharide assembly protein A domain
BBJ33_RS12985	PF02080	TrkA-C domain
BBJ33_RS12990	PF02355	Protein export membrane protein
BBJ33_RS12990	PF07549	SecD/SecF GG Motif
BBJ33_RS12995	PF13797	Post-transcriptional regulator
BBJ33_RS13000	PF14667	Polysaccharide biosynthesis C-terminal domain
BBJ33_RS13000	PF01943	Polysaccharide biosynthesis protein
BBJ33_RS13005	PF04239	Protein of unknown function (DUF421)
BBJ33_RS13010	PF12670	Protein of unknown function (DUF3792)
BBJ33_RS13015	PF02699	Preprotein translocase subunit
BBJ33_RS13020	PF01702	Queuine tRNA-ribosyltransferase
BBJ33_RS13025	PF02547	Queuosine biosynthesis protein
BBJ33_RS13030	PF11146	Protein of unknown function (DUF2905)
BBJ33_RS13035	PF05491	RuvB C-terminal winged helix domain
BBJ33_RS13035	PF05496	Holliday junction DNA helicase RuvB P-loop domain
BBJ33_RS13035	PF17864	RuvB AAA lid domain
BBJ33_RS13040	PF01330	RuvA N terminal domain
BBJ33_RS13040	PF07499	RuvA, C-terminal domain
BBJ33_RS13045	PF08955	BofC C-terminal domain
BBJ33_RS13045	PF08977	Bypass of Forespore C, N terminal
BBJ33_RS13055	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
BBJ33_RS13060	PF01476	LysM domain
BBJ33_RS13065	PF02445	Quinolinate synthetase A protein
BBJ33_RS13070	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
BBJ33_RS13070	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
BBJ33_RS13075	PF00890	FAD binding domain
BBJ33_RS13075	PF02910	Fumarate reductase flavoprotein C-term
BBJ33_RS13080	PF00266	Aminotransferase class-V
BBJ33_RS13085	PF02829	3H domain
BBJ33_RS13085	PF08279	HTH domain
BBJ33_RS13090	PF00800	Prephenate dehydratase
BBJ33_RS13090	PF01842	ACT domain
BBJ33_RS13095	PF01842	ACT domain
BBJ33_RS13100	PF01018	GTP1/OBG
BBJ33_RS13100	PF01926	50S ribosome-binding GTPase
BBJ33_RS13100	PF09269	Domain of unknown function (DUF1967)
BBJ33_RS13105	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
BBJ33_RS13105	PF14682	Sporulation initiation phospho-transferase B, C-terminal
BBJ33_RS13110	PF01016	Ribosomal L27 protein
BBJ33_RS13115	PF04327	Cysteine protease Prp
BBJ33_RS13120	PF00829	Ribosomal prokaryotic L21 protein
BBJ33_RS13125	PF02163	Peptidase family M50
BBJ33_RS13130	PF01551	Peptidase family M23
BBJ33_RS13135	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
BBJ33_RS13140	PF03775	Septum formation inhibitor MinC, C-terminal domain
BBJ33_RS13145	PF04093	rod shape-determining protein MreD
BBJ33_RS13150	PF04085	rod shape-determining protein MreC
BBJ33_RS13160	PF04002	RadC-like JAB domain
BBJ33_RS13165	PF02545	Maf-like protein
BBJ33_RS13170	PF05036	Sporulation related domain
BBJ33_RS13175	PF01478	Type IV leader peptidase family
BBJ33_RS13175	PF06750	Bacterial Peptidase A24 N-terminal domain
BBJ33_RS13180	PF02875	Mur ligase family, glutamate ligase domain
BBJ33_RS13180	PF08245	Mur ligase middle domain
BBJ33_RS13185	PF08264	Anticodon-binding domain of tRNA
BBJ33_RS13185	PF10458	Valyl tRNA synthetase tRNA binding arm
BBJ33_RS13185	PF00133	tRNA synthetases class I (I, L, M and V)
BBJ33_RS13200	PF01476	LysM domain
BBJ33_RS13205	PF00202	Aminotransferase class-III
BBJ33_RS13210	PF00490	Delta-aminolevulinic acid dehydratase
BBJ33_RS13215	PF02602	Uroporphyrinogen-III synthase HemD
BBJ33_RS13220	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
BBJ33_RS13220	PF03900	Porphobilinogen deaminase, C-terminal domain
BBJ33_RS13225	PF01578	Cytochrome C assembly protein
BBJ33_RS13230	PF01488	Shikimate / quinate 5-dehydrogenase
BBJ33_RS13230	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
BBJ33_RS13230	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
BBJ33_RS13240	PF01926	50S ribosome-binding GTPase
BBJ33_RS13245	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
BBJ33_RS13245	PF05362	Lon protease (S16) C-terminal proteolytic domain
BBJ33_RS13245	PF00004	ATPase family associated with various cellular activities (AAA)
BBJ33_RS13250	PF05362	Lon protease (S16) C-terminal proteolytic domain
BBJ33_RS13250	PF00004	ATPase family associated with various cellular activities (AAA)
BBJ33_RS13255	PF06689	ClpX C4-type zinc finger
BBJ33_RS13255	PF10431	C-terminal, D2-small domain, of ClpB protein 
BBJ33_RS13255	PF07724	AAA domain (Cdc48 subfamily)
BBJ33_RS13260	PF05697	Bacterial trigger factor protein (TF)
BBJ33_RS13260	PF05698	Bacterial trigger factor protein (TF) C-terminus
BBJ33_RS13260	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
BBJ33_RS13270	PF00694	Aconitase C-terminal domain
BBJ33_RS13275	PF00330	Aconitase family (aconitate hydratase)
BBJ33_RS13280	PF00180	Isocitrate/isopropylmalate dehydrogenase
BBJ33_RS13285	PF00682	HMGL-like
BBJ33_RS13285	PF08502	LeuA allosteric (dimerisation) domain
BBJ33_RS13290	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
BBJ33_RS13290	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
BBJ33_RS13295	PF10369	Small subunit of acetolactate synthase
BBJ33_RS13295	PF01842	ACT domain
BBJ33_RS13300	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BBJ33_RS13300	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BBJ33_RS13300	PF00205	Thiamine pyrophosphate enzyme, central domain
BBJ33_RS13320	PF01420	Type I restriction modification DNA specificity domain
BBJ33_RS13325	PF02384	N-6 DNA Methylase
BBJ33_RS13330	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
BBJ33_RS13330	PF08463	EcoEI R protein C-terminal
BBJ33_RS13330	PF00271	Helicase conserved C-terminal domain
BBJ33_RS13330	PF04851	Type III restriction enzyme, res subunit
BBJ33_RS13350	PF12850	Calcineurin-like phosphoesterase superfamily domain
BBJ33_RS13355	PF01725	Ham1 family
BBJ33_RS13360	PF01138	3' exoribonuclease family, domain 1
BBJ33_RS13360	PF03725	3' exoribonuclease family, domain 2
BBJ33_RS13365	PF10646	Sporulation and spore germination
BBJ33_RS13370	PF01177	Asp/Glu/Hydantoin racemase
BBJ33_RS13375	PF01047	MarR family
BBJ33_RS13380	PF00196	Bacterial regulatory proteins, luxR family
BBJ33_RS13385	PF03061	Thioesterase superfamily
BBJ33_RS13390	PF13183	4Fe-4S dicluster domain
BBJ33_RS13390	PF13085	2Fe-2S iron-sulfur cluster binding domain
BBJ33_RS13395	PF00890	FAD binding domain
BBJ33_RS13395	PF02910	Fumarate reductase flavoprotein C-term
BBJ33_RS13400	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
BBJ33_RS13405	PF10702	Protein of unknown function (DUF2507)
BBJ33_RS13410	PF00696	Amino acid kinase family
BBJ33_RS13410	PF01842	ACT domain
BBJ33_RS13410	PF13840	ACT domain 
BBJ33_RS13415	PF02151	UvrB/uvrC motif
BBJ33_RS13415	PF01541	GIY-YIG catalytic domain
BBJ33_RS13415	PF08459	UvrC Helix-hairpin-helix N-terminal
BBJ33_RS13420	PF00085	Thioredoxin
BBJ33_RS13425	PF06964	Alpha-L-arabinofuranosidase C-terminal domain
BBJ33_RS13430	PF00766	Electron transfer flavoprotein FAD-binding domain
BBJ33_RS13430	PF01012	Electron transfer flavoprotein domain
BBJ33_RS13435	PF01012	Electron transfer flavoprotein domain
BBJ33_RS13440	PF00378	Enoyl-CoA hydratase/isomerase
BBJ33_RS13445	PF00440	Bacterial regulatory proteins, tetR family
BBJ33_RS13445	PF08359	YsiA-like protein, C-terminal region
BBJ33_RS13450	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS13450	PF00501	AMP-binding enzyme
BBJ33_RS13460	PF03994	Domain of Unknown Function (DUF350) 
BBJ33_RS13465	PF01713	Smr domain
BBJ33_RS13465	PF00488	MutS domain V
BBJ33_RS13470	PF14791	DNA polymerase beta thumb 
BBJ33_RS13470	PF02811	PHP domain
BBJ33_RS13470	PF14716	Helix-hairpin-helix domain
BBJ33_RS13475	PF02674	Colicin V production protein
BBJ33_RS13480	PF05164	Cell division protein ZapA
BBJ33_RS13485	PF01351	Ribonuclease HII
BBJ33_RS13485	PF11858	Domain of unknown function (DUF3378)
BBJ33_RS13490	PF03483	B3/4 domain
BBJ33_RS13490	PF01588	Putative tRNA binding domain
BBJ33_RS13490	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
BBJ33_RS13490	PF03484	tRNA synthetase B5 domain
BBJ33_RS13490	PF03147	Ferredoxin-fold anticodon binding domain
BBJ33_RS13495	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
BBJ33_RS13495	PF01409	tRNA synthetases class II core domain (F)
BBJ33_RS13500	PF08032	RNA 2'-O ribose methyltransferase substrate binding
BBJ33_RS13500	PF00588	SpoU rRNA Methylase family
BBJ33_RS13505	PF14098	Small, acid-soluble spore protein I
BBJ33_RS13510	PF05651	Putative sugar diacid recognition
BBJ33_RS13510	PF17853	GGDEF-like domain
BBJ33_RS13510	PF13556	PucR C-terminal helix-turn-helix domain
BBJ33_RS13515	PF02913	FAD linked oxidases, C-terminal domain
BBJ33_RS13515	PF01565	FAD binding domain 
BBJ33_RS13520	PF02754	Cysteine-rich domain
BBJ33_RS13520	PF13183	4Fe-4S dicluster domain
BBJ33_RS13525	PF13722	5TM C-terminal transporter carbon starvation CstA
BBJ33_RS13525	PF02554	Carbon starvation protein CstA
BBJ33_RS13530	PF06964	Alpha-L-arabinofuranosidase C-terminal domain
BBJ33_RS13535	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS13540	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS13545	PF01547	Bacterial extracellular solute-binding protein
BBJ33_RS13550	PF13685	Iron-containing alcohol dehydrogenase
BBJ33_RS13555	PF13344	Haloacid dehalogenase-like hydrolase
BBJ33_RS13560	PF00596	Class II Aldolase and Adducin N-terminal domain
BBJ33_RS13565	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BBJ33_RS13565	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BBJ33_RS13570	PF11762	L-arabinose isomerase C-terminal domain
BBJ33_RS13570	PF02610	L-arabinose isomerase
BBJ33_RS13575	PF04616	Glycosyl hydrolases family 43
BBJ33_RS13580	PF05343	M42 glutamyl aminopeptidase
BBJ33_RS13590	PF06961	Protein of unknown function (DUF1294)
BBJ33_RS13595	PF00453	Ribosomal protein L20
BBJ33_RS13600	PF01632	Ribosomal protein L35
BBJ33_RS13605	PF00707	Translation initiation factor IF-3, C-terminal domain
BBJ33_RS13605	PF05198	Translation initiation factor IF-3, N-terminal domain
BBJ33_RS13610	PF04172	LrgB-like family 
BBJ33_RS13615	PF03788	LrgA family
BBJ33_RS13620	PF04397	LytTr DNA-binding domain
BBJ33_RS13620	PF00072	Response regulator receiver domain
BBJ33_RS13625	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS13625	PF06580	Histidine kinase
BBJ33_RS13625	PF07694	5TMR of 5TMR-LYT
BBJ33_RS13630	PF13419	Haloacid dehalogenase-like hydrolase
BBJ33_RS13635	PF03129	Anticodon binding domain
BBJ33_RS13635	PF02824	TGS domain
BBJ33_RS13635	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BBJ33_RS13635	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BBJ33_RS13640	PF08812	YtxC-like family
BBJ33_RS13645	PF09335	SNARE associated Golgi protein
BBJ33_RS13650	PF01695	IstB-like ATP binding protein
BBJ33_RS13650	PF07319	Primosomal protein DnaI N-terminus
BBJ33_RS13655	PF07261	Replication initiation and membrane attachment
BBJ33_RS13660	PF03477	ATP cone domain
BBJ33_RS13665	PF02675	S-adenosylmethionine decarboxylase 
BBJ33_RS13670	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BBJ33_RS13670	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
BBJ33_RS13675	PF01638	HxlR-like helix-turn-helix
BBJ33_RS13680	PF07690	Major Facilitator Superfamily
BBJ33_RS13685	PF00248	Aldo/keto reductase family
BBJ33_RS13690	PF01121	Dephospho-CoA kinase
BBJ33_RS13695	PF02659	Putative manganese efflux pump
BBJ33_RS13700	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
BBJ33_RS13700	PF06827	Zinc finger found in FPG and IleRS
BBJ33_RS13700	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
BBJ33_RS13705	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
BBJ33_RS13705	PF00476	DNA polymerase family A
BBJ33_RS13705	PF01367	5'-3' exonuclease, C-terminal SAM fold
BBJ33_RS13710	PF16736	Single Cache-like 
BBJ33_RS13710	PF00512	His Kinase A (phospho-acceptor) domain
BBJ33_RS13710	PF00989	PAS fold
BBJ33_RS13710	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS13715	PF00486	Transcriptional regulatory protein, C terminal
BBJ33_RS13715	PF00072	Response regulator receiver domain
BBJ33_RS13720	PF00056	lactate/malate dehydrogenase, NAD binding domain
BBJ33_RS13720	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BBJ33_RS13725	PF00180	Isocitrate/isopropylmalate dehydrogenase
BBJ33_RS13730	PF00285	Citrate synthase, C-terminal domain
BBJ33_RS13735	PF11208	Protein of unknown function (DUF2992)
BBJ33_RS13740	PF04284	Protein of unknown function (DUF441)
BBJ33_RS13745	PF01594	AI-2E family transporter
BBJ33_RS13750	PF04186	FxsA cytoplasmic membrane protein 
BBJ33_RS13755	PF00391	PEP-utilising enzyme, mobile domain
BBJ33_RS13755	PF00224	Pyruvate kinase, barrel domain
BBJ33_RS13755	PF02887	Pyruvate kinase, alpha/beta domain
BBJ33_RS13760	PF00365	Phosphofructokinase
BBJ33_RS13765	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
BBJ33_RS13770	PF17848	Acetyl-coA carboxylase zinc finger domain
BBJ33_RS13770	PF01039	Carboxyl transferase domain
BBJ33_RS13780	PF00390	Malic enzyme, N-terminal domain
BBJ33_RS13780	PF03949	Malic enzyme, NAD binding domain
BBJ33_RS13785	PF01336	OB-fold nucleic acid binding domain
BBJ33_RS13785	PF07733	Bacterial DNA polymerase III alpha NTPase domain
BBJ33_RS13785	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
BBJ33_RS13785	PF14579	Helix-hairpin-helix motif
BBJ33_RS13785	PF02811	PHP domain
BBJ33_RS13790	PF14034	Sporulation protein YtrH
BBJ33_RS13805	PF01368	DHH family
BBJ33_RS13805	PF02272	DHHA1 domain
BBJ33_RS13810	PF14007	YtpI-like protein
BBJ33_RS13815	PF07085	DRTGG domain
BBJ33_RS13815	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS13815	PF03061	Thioesterase superfamily
BBJ33_RS13815	PF00571	CBS domain
BBJ33_RS13830	PF00206	Lyase
BBJ33_RS13830	PF14698	Argininosuccinate lyase C-terminal
BBJ33_RS13835	PF00764	Arginosuccinate synthase
BBJ33_RS13840	PF00994	Probable molybdopterin binding domain
BBJ33_RS13845	PF00871	Acetokinase family
BBJ33_RS13850	PF02384	N-6 DNA Methylase
BBJ33_RS13855	PF08534	Redoxin
BBJ33_RS13860	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
BBJ33_RS13865	PF11167	Protein of unknown function (DUF2953)
BBJ33_RS13870	PF06271	RDD family
BBJ33_RS13875	PF01343	Peptidase family S49
BBJ33_RS13880	PF01513	ATP-NAD kinase
BBJ33_RS13885	PF07969	Amidohydrolase family
BBJ33_RS13890	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS13890	PF00501	AMP-binding enzyme
BBJ33_RS13895	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BBJ33_RS13900	PF02568	Thiamine biosynthesis protein (ThiI)
BBJ33_RS13900	PF02926	THUMP domain
BBJ33_RS13905	PF00266	Aminotransferase class-V
BBJ33_RS13910	PF05525	Branched-chain amino acid transport protein
BBJ33_RS13915	PF06160	Septation ring formation regulator, EzrA 
BBJ33_RS13920	PF02811	PHP domain
BBJ33_RS13925	PF00440	Bacterial regulatory proteins, tetR family
BBJ33_RS13930	PF13185	GAF domain
BBJ33_RS13935	PF00990	Diguanylate cyclase, GGDEF domain
BBJ33_RS13940	PF00163	Ribosomal protein S4/S9 N-terminal domain
BBJ33_RS13940	PF01479	S4 domain
BBJ33_RS13945	PF00171	Aldehyde dehydrogenase family
BBJ33_RS13950	PF09346	SMI1 / KNR4 family (SUKH-1)
BBJ33_RS13975	PF03796	DnaB-like helicase C terminal domain
BBJ33_RS13975	PF00772	DnaB-like helicase N terminal domain
BBJ33_RS13980	PF00175	Oxidoreductase NAD-binding domain 
BBJ33_RS13980	PF00042	Globin
BBJ33_RS13980	PF00970	Oxidoreductase FAD-binding domain
BBJ33_RS13990	PF01965	DJ-1/PfpI family
BBJ33_RS14005	PF16916	Dimerisation domain of Zinc Transporter
BBJ33_RS14005	PF01545	Cation efflux family
BBJ33_RS14010	PF11495	Archaeal transcriptional regulator TrmB
BBJ33_RS14010	PF01978	Sugar-specific transcriptional regulator TrmB
BBJ33_RS14025	PF00579	tRNA synthetases class I (W and Y)
BBJ33_RS14025	PF01479	S4 domain
BBJ33_RS14030	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS14030	PF00501	AMP-binding enzyme
BBJ33_RS14035	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS14040	PF00571	CBS domain
BBJ33_RS14045	PF00850	Histone deacetylase domain
BBJ33_RS14050	PF00691	OmpA family
BBJ33_RS14050	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
BBJ33_RS14055	PF01618	MotA/TolQ/ExbB proton channel family
BBJ33_RS14060	PF00356	Bacterial regulatory proteins, lacI family
BBJ33_RS14065	PF00793	DAHP synthetase I family
BBJ33_RS14065	PF01817	Chorismate mutase type II
BBJ33_RS14070	PF11009	Protein of unknown function (DUF2847)
BBJ33_RS14075	PF12732	YtxH-like protein
BBJ33_RS14080	PF06103	Bacterial protein of unknown function (DUF948)
BBJ33_RS14085	PF01225	Mur ligase family, catalytic domain
BBJ33_RS14085	PF08245	Mur ligase middle domain
BBJ33_RS14085	PF02875	Mur ligase family, glutamate ligase domain
BBJ33_RS14090	PF09397	Ftsk gamma domain
BBJ33_RS14090	PF01580	FtsK/SpoIIIE family
BBJ33_RS14090	PF17854	FtsK alpha domain
BBJ33_RS14095	PF01588	Putative tRNA binding domain
BBJ33_RS14095	PF14794	Domain of unknown function (DUF4479)
BBJ33_RS14100	PF07285	Protein of unknown function (DUF1444)
BBJ33_RS14105	PF00085	Thioredoxin
BBJ33_RS14110	PF11071	Nucleoside 2-deoxyribosyltransferase YtoQ
BBJ33_RS14115	PF05343	M42 glutamyl aminopeptidase
BBJ33_RS14120	PF03413	Peptidase propeptide and YPEB domain
BBJ33_RS14125	PF00390	Malic enzyme, N-terminal domain
BBJ33_RS14125	PF03949	Malic enzyme, NAD binding domain
BBJ33_RS14130	PF00753	Metallo-beta-lactamase superfamily
BBJ33_RS14135	PF02390	Putative methyltransferase 
BBJ33_RS14140	PF14165	YtzH-like protein
BBJ33_RS14145	PF01636	Phosphotransferase enzyme family
BBJ33_RS14150	PF00781	Diacylglycerol kinase catalytic domain
BBJ33_RS14165	PF00291	Pyridoxal-phosphate dependent enzyme
BBJ33_RS14170	PF01546	Peptidase family M20/M25/M40
BBJ33_RS14175	PF00860	Permease family
BBJ33_RS14180	PF05975	Bacterial ABC transporter protein EcsB
BBJ33_RS14185	PF00005	ABC transporter
BBJ33_RS14190	PF08220	DeoR-like helix-turn-helix domain
BBJ33_RS14195	PF01479	S4 domain
BBJ33_RS14195	PF00849	RNA pseudouridylate synthase
BBJ33_RS14200	PF01943	Polysaccharide biosynthesis protein
BBJ33_RS14200	PF14667	Polysaccharide biosynthesis C-terminal domain
BBJ33_RS14210	PF02028	BCCT, betaine/carnitine/choline family transporter
BBJ33_RS14215	PF10957	Sporulation protein Cse60 
BBJ33_RS14220	PF00356	Bacterial regulatory proteins, lacI family
BBJ33_RS14225	PF01547	Bacterial extracellular solute-binding protein
BBJ33_RS14230	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS14235	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS14240	PF02056	Family 4 glycosyl hydrolase
BBJ33_RS14240	PF11975	Family 4 glycosyl hydrolase C-terminal domain
BBJ33_RS14250	PF00581	Rhodanese-like domain
BBJ33_RS14255	PF00133	tRNA synthetases class I (I, L, M and V)
BBJ33_RS14255	PF09334	tRNA synthetases class I (M)
BBJ33_RS14255	PF13603	Leucyl-tRNA synthetase, Domain 2
BBJ33_RS14255	PF08264	Anticodon-binding domain of tRNA
BBJ33_RS14260	PF14074	Protein of unknown function (DUF4257)
BBJ33_RS14265	PF01740	STAS domain
BBJ33_RS14265	PF13426	PAS domain
BBJ33_RS14270	PF07690	Major Facilitator Superfamily
BBJ33_RS14275	PF09529	Integral membrane protein (intg_mem_TP0381)
BBJ33_RS14280	PF02687	FtsX-like permease family
BBJ33_RS14285	PF00005	ABC transporter
BBJ33_RS14290	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS14295	PF00486	Transcriptional regulatory protein, C terminal
BBJ33_RS14295	PF00072	Response regulator receiver domain
BBJ33_RS14300	PF12704	MacB-like periplasmic core domain
BBJ33_RS14300	PF02687	FtsX-like permease family
BBJ33_RS14305	PF00005	ABC transporter
BBJ33_RS14325	PF00005	ABC transporter
BBJ33_RS14330	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS14335	PF10732	Protein of unknown function (DUF2524)
BBJ33_RS14340	PF01022	Bacterial regulatory protein, arsR family
BBJ33_RS14345	PF07690	Major Facilitator Superfamily
BBJ33_RS14350	PF16199	Radical_SAM C-terminal domain
BBJ33_RS14350	PF04055	Radical SAM superfamily
BBJ33_RS14355	PF06962	Putative rRNA methylase
BBJ33_RS14365	PF03009	Glycerophosphoryl diester phosphodiesterase family
BBJ33_RS14370	PF10776	Protein of unknown function (DUF2600)
BBJ33_RS14375	PF12146	Serine aminopeptidase, S33
BBJ33_RS14380	PF00132	Bacterial transferase hexapeptide (six repeats)
BBJ33_RS14385	PF00324	Amino acid permease
BBJ33_RS14390	PF13537	Glutamine amidotransferase domain
BBJ33_RS14390	PF00733	Asparagine synthase
BBJ33_RS14395	PF00438	S-adenosylmethionine synthetase, N-terminal domain
BBJ33_RS14395	PF02773	S-adenosylmethionine synthetase, C-terminal domain
BBJ33_RS14395	PF02772	S-adenosylmethionine synthetase, central domain
BBJ33_RS14400	PF01293	Phosphoenolpyruvate carboxykinase
BBJ33_RS14405	PF10763	Protein of unknown function (DUF2584)
BBJ33_RS14410	PF00326	Prolyl oligopeptidase family
BBJ33_RS14420	PF00005	ABC transporter
BBJ33_RS14425	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS14430	PF00293	NUDIX domain
BBJ33_RS14435	PF05105	Bacteriophage holin family 
BBJ33_RS14440	PF00210	Ferritin-like domain
BBJ33_RS14450	PF13115	YtkA-like
BBJ33_RS14455	PF02664	S-Ribosylhomocysteinase (LuxS)
BBJ33_RS14460	PF01809	Putative membrane protein insertion efficiency factor
BBJ33_RS14465	PF00484	Carbonic anhydrase
BBJ33_RS14470	PF01197	Ribosomal protein L31
BBJ33_RS14475	PF01654	Cytochrome bd terminal oxidase subunit I
BBJ33_RS14480	PF02322	Cytochrome bd terminal oxidase subunit II
BBJ33_RS14485	PF07561	Domain of Unknown Function (DUF1540)
BBJ33_RS14490	PF13378	Enolase C-terminal domain-like
BBJ33_RS14490	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
BBJ33_RS14495	PF00501	AMP-binding enzyme
BBJ33_RS14495	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS14500	PF00378	Enoyl-CoA hydratase/isomerase
BBJ33_RS14505	PF00561	alpha/beta hydrolase fold
BBJ33_RS14510	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BBJ33_RS14510	PF16582	Middle domain of thiamine pyrophosphate
BBJ33_RS14510	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BBJ33_RS14515	PF00425	chorismate binding enzyme
BBJ33_RS14520	PF01258	Prokaryotic dksA/traR C4-type zinc finger
BBJ33_RS14525	PF03073	TspO/MBR family
BBJ33_RS14650	PF09515	Thiamine transporter protein (Thia_YuaJ)
BBJ33_RS14655	PF15975	Flotillin
BBJ33_RS14655	PF01145	SPFH domain / Band 7 family
BBJ33_RS14665	PF12867	DinB superfamily
BBJ33_RS14675	PF00465	Iron-containing alcohol dehydrogenase 
BBJ33_RS14680	PF00171	Aldehyde dehydrogenase family
BBJ33_RS14690	PF17735	Biofilm surface layer A
BBJ33_RS14695	PF02254	TrkA-N domain
BBJ33_RS14695	PF02080	TrkA-C domain
BBJ33_RS14700	PF13457	GW (Gly-Tryp) dipeptide domain
BBJ33_RS14700	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
BBJ33_RS14705	PF00042	Globin
BBJ33_RS14705	PF00175	Oxidoreductase NAD-binding domain 
BBJ33_RS14705	PF00970	Oxidoreductase FAD-binding domain
BBJ33_RS14725	PF02673	Bacitracin resistance protein BacA
BBJ33_RS14730	PF01594	AI-2E family transporter
BBJ33_RS14735	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BBJ33_RS14735	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BBJ33_RS14740	PF01965	DJ-1/PfpI family
BBJ33_RS14745	PF00672	HAMP domain
BBJ33_RS14745	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BBJ33_RS14745	PF02743	Cache domain
BBJ33_RS14750	PF02743	Cache domain
BBJ33_RS14750	PF00672	HAMP domain
BBJ33_RS14750	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BBJ33_RS14755	PF02743	Cache domain
BBJ33_RS14755	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BBJ33_RS14755	PF00672	HAMP domain
BBJ33_RS14760	PF00672	HAMP domain
BBJ33_RS14760	PF02743	Cache domain
BBJ33_RS14760	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BBJ33_RS14775	PF03060	Nitronate monooxygenase
BBJ33_RS14780	PF01894	Uncharacterised protein family UPF0047
BBJ33_RS14785	PF16657	Maltogenic Amylase, C-terminal domain
BBJ33_RS14785	PF00128	Alpha amylase, catalytic domain
BBJ33_RS14790	PF03471	Transporter associated domain
BBJ33_RS14790	PF00571	CBS domain
BBJ33_RS14790	PF01595	Cyclin M transmembrane N-terminal domain
BBJ33_RS14795	PF04298	Putative neutral zinc metallopeptidase
BBJ33_RS14805	PF11458	Membrane-integrating protein Mistic
BBJ33_RS14810	PF07885	Ion channel
BBJ33_RS14810	PF02254	TrkA-N domain
BBJ33_RS14815	PF08868	YugN-like family
BBJ33_RS14825	PF00342	Phosphoglucose isomerase
BBJ33_RS14835	PF03358	NADPH-dependent FMN reductase
BBJ33_RS14840	PF00857	Isochorismatase family
BBJ33_RS14845	PF00465	Iron-containing alcohol dehydrogenase 
BBJ33_RS14850	PF00465	Iron-containing alcohol dehydrogenase 
BBJ33_RS14855	PF04070	Domain of unknown function (DUF378)
BBJ33_RS14860	PF00575	S1 RNA binding domain
BBJ33_RS14865	PF00155	Aminotransferase class I and II
BBJ33_RS14870	PF01037	Lrp/AsnC ligand binding domain
BBJ33_RS14875	PF08386	TAP-like protein
BBJ33_RS14875	PF00561	alpha/beta hydrolase fold
BBJ33_RS14880	PF08958	Domain of unknown function (DUF1871)
BBJ33_RS14885	PF00155	Aminotransferase class I and II
BBJ33_RS14890	PF00512	His Kinase A (phospho-acceptor) domain
BBJ33_RS14890	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS14895	PF08810	Kinase associated protein B
BBJ33_RS14900	PF00929	Exonuclease
BBJ33_RS14905	PF07690	Major Facilitator Superfamily
BBJ33_RS14910	PF00905	Penicillin binding protein transpeptidase domain
BBJ33_RS14910	PF00912	Transglycosylase
BBJ33_RS14915	PF04134	Protein of unknown function, DUF393
BBJ33_RS14920	PF17328	Family of unknown function (DUF5366)
BBJ33_RS14925	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS14925	PF17203	Single cache domain 3
BBJ33_RS14925	PF00989	PAS fold
BBJ33_RS14925	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
BBJ33_RS14930	PF00072	Response regulator receiver domain
BBJ33_RS14935	PF02608	ABC transporter substrate-binding protein PnrA-like
BBJ33_RS14940	PF00005	ABC transporter
BBJ33_RS14945	PF02653	Branched-chain amino acid transport system / permease component
BBJ33_RS14950	PF02653	Branched-chain amino acid transport system / permease component
BBJ33_RS14960	PF13244	Domain of unknown function (DUF4040)
BBJ33_RS14960	PF00361	Proton-conducting membrane transporter
BBJ33_RS14960	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
BBJ33_RS14965	PF04039	Domain related to MnhB subunit of Na+/H+ antiporter
BBJ33_RS14970	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
BBJ33_RS14975	PF00361	Proton-conducting membrane transporter
BBJ33_RS14980	PF01899	Na+/H+ ion antiporter subunit
BBJ33_RS14985	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
BBJ33_RS14990	PF03334	Na+/H+ antiporter subunit
BBJ33_RS14995	PF03061	Thioesterase superfamily
BBJ33_RS15000	PF00196	Bacterial regulatory proteins, luxR family
BBJ33_RS15000	PF00072	Response regulator receiver domain
BBJ33_RS15005	PF07730	Histidine kinase
BBJ33_RS15005	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS15015	PF00348	Polyprenyl synthetase
BBJ33_RS15020	PF08181	DegQ (SacQ) family
BBJ33_RS15030	PF08668	HDOD domain
BBJ33_RS15030	PF00563	EAL domain
BBJ33_RS15035	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
BBJ33_RS15035	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
BBJ33_RS15035	PF17956	Nicotinate phosphoribosyltransferase C-terminal domain
BBJ33_RS15040	PF00857	Isochorismatase family
BBJ33_RS15045	PF07997	Protein of unknown function (DUF1694)
BBJ33_RS15050	PF14166	YueH-like protein
BBJ33_RS15055	PF10676	Spore germination protein gerPA/gerPF
BBJ33_RS15060	PF01594	AI-2E family transporter
BBJ33_RS15065	PF10842	Protein of unknown function (DUF2642)
BBJ33_RS15070	PF01966	HD domain
BBJ33_RS15075	PF00106	short chain dehydrogenase
BBJ33_RS15080	PF17355	Family of unknown function (DUF5383)
BBJ33_RS15090	PF01580	FtsK/SpoIIIE family
BBJ33_RS15090	PF12538	DNA transporter 
BBJ33_RS15095	PF10140	WXG100 protein secretion system (Wss), protein YukC
BBJ33_RS15100	PF08817	WXG100 protein secretion system (Wss), protein YukD
BBJ33_RS15105	PF06013	Proteins of 100 residues with WXG
BBJ33_RS15110	PF06018	CodY GAF-like domain
BBJ33_RS15110	PF17853	GGDEF-like domain
BBJ33_RS15110	PF13556	PucR C-terminal helix-turn-helix domain
BBJ33_RS15115	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
BBJ33_RS15115	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
BBJ33_RS15120	PF10042	Uncharacterized conserved protein (DUF2278)
BBJ33_RS15125	PF03621	MbtH-like protein
BBJ33_RS15130	PF00501	AMP-binding enzyme
BBJ33_RS15130	PF00975	Thioesterase domain
BBJ33_RS15130	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS15130	PF00550	Phosphopantetheine attachment site
BBJ33_RS15130	PF00668	Condensation domain
BBJ33_RS15135	PF00857	Isochorismatase family
BBJ33_RS15135	PF00550	Phosphopantetheine attachment site
BBJ33_RS15140	PF00501	AMP-binding enzyme
BBJ33_RS15140	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS15145	PF00425	chorismate binding enzyme
BBJ33_RS15150	PF00106	short chain dehydrogenase
BBJ33_RS15155	PF00756	Putative esterase
BBJ33_RS15160	PF00174	Oxidoreductase molybdopterin binding domain
BBJ33_RS15165	PF02632	BioY family
BBJ33_RS15170	PF13726	Na+-H+ antiporter family
BBJ33_RS15170	PF03553	Na+/H+ antiporter family
BBJ33_RS15175	PF02789	Cytosol aminopeptidase family, N-terminal domain
BBJ33_RS15175	PF00883	Cytosol aminopeptidase family, catalytic domain
BBJ33_RS15180	PF02681	Divergent PAP2 family
BBJ33_RS15185	PF06725	3D domain
BBJ33_RS15190	PF14068	Putative membrane protein
BBJ33_RS15195	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BBJ33_RS15205	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BBJ33_RS15210	PF00478	IMP dehydrogenase / GMP reductase domain
BBJ33_RS15225	PF00005	ABC transporter
BBJ33_RS15235	PF09221	Bacteriocin class IId cyclical uberolysin-like
BBJ33_RS15250	PF00106	short chain dehydrogenase
BBJ33_RS15255	PF01521	Iron-sulphur cluster biosynthesis
BBJ33_RS15260	PF01678	Diaminopimelate epimerase
BBJ33_RS15265	PF01773	Na+ dependent nucleoside transporter N-terminus
BBJ33_RS15265	PF07662	Na+ dependent nucleoside transporter C-terminus
BBJ33_RS15270	PF07293	Protein of unknown function (DUF1450)
BBJ33_RS15275	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BBJ33_RS15280	PF07315	Protein of unknown function (DUF1462)
BBJ33_RS15285	PF01106	NifU-like domain
BBJ33_RS15290	PF00326	Prolyl oligopeptidase family
BBJ33_RS15290	PF07676	WD40-like Beta Propeller Repeat
BBJ33_RS15295	PF00288	GHMP kinases N terminal domain
BBJ33_RS15295	PF08544	GHMP kinases C terminal 
BBJ33_RS15300	PF00291	Pyridoxal-phosphate dependent enzyme
BBJ33_RS15305	PF00742	Homoserine dehydrogenase
BBJ33_RS15305	PF03447	Homoserine dehydrogenase, NAD binding domain
BBJ33_RS15305	PF01842	ACT domain
BBJ33_RS15315	PF04608	Phosphatidylglycerophosphatase A
BBJ33_RS15320	PF13344	Haloacid dehalogenase-like hydrolase
BBJ33_RS15325	PF01934	Protein of unknown function DUF86
BBJ33_RS15330	PF06265	Protein of unknown function (DUF1027)
BBJ33_RS15335	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
BBJ33_RS15335	PF04055	Radical SAM superfamily
BBJ33_RS15340	PF01551	Peptidase family M23
BBJ33_RS15345	PF09560	Sporulation protein YunB (Spo_YunB)
BBJ33_RS15350	PF02872	5'-nucleotidase, C-terminal domain
BBJ33_RS15355	PF01925	Sulfite exporter TauE/SafE
BBJ33_RS15360	PF01904	Protein of unknown function DUF72
BBJ33_RS15370	PF01979	Amidohydrolase family
BBJ33_RS15375	PF17853	GGDEF-like domain
BBJ33_RS15375	PF13556	PucR C-terminal helix-turn-helix domain
BBJ33_RS15375	PF07905	Purine catabolism regulatory protein-like family
BBJ33_RS15400	PF07690	Major Facilitator Superfamily
BBJ33_RS15405	PF00266	Aminotransferase class-V
BBJ33_RS15410	PF01546	Peptidase family M20/M25/M40
BBJ33_RS15415	PF04231	Endonuclease I
BBJ33_RS15420	PF00005	ABC transporter
BBJ33_RS15420	PF03459	TOBE domain
BBJ33_RS15420	PF17912	MalK OB fold domain
BBJ33_RS15425	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS15425	PF07702	UTRA domain
BBJ33_RS15430	PF00294	pfkB family carbohydrate kinase
BBJ33_RS15435	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS15440	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS15445	PF01547	Bacterial extracellular solute-binding protein
BBJ33_RS15450	PF01380	SIS domain
BBJ33_RS15455	PF07853	Protein of unknown function (DUF1648)
BBJ33_RS15460	PF01541	GIY-YIG catalytic domain
BBJ33_RS15465	PF01266	FAD dependent oxidoreductase
BBJ33_RS15470	PF01209	ubiE/COQ5 methyltransferase family
BBJ33_RS15480	PF01374	Glycosyl hydrolase family 46
BBJ33_RS15485	PF01458	Uncharacterized protein family (UPF0051)
BBJ33_RS15490	PF01592	NifU-like N terminal domain
BBJ33_RS15495	PF00266	Aminotransferase class-V
BBJ33_RS15500	PF01458	Uncharacterized protein family (UPF0051)
BBJ33_RS15505	PF00005	ABC transporter
BBJ33_RS15510	PF02627	Carboxymuconolactone decarboxylase family
BBJ33_RS15515	PF03180	NLPA lipoprotein
BBJ33_RS15520	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS15525	PF09383	NIL domain
BBJ33_RS15525	PF00005	ABC transporter
BBJ33_RS15530	PF02036	SCP-2 sterol transfer family
BBJ33_RS15535	PF00085	Thioredoxin
BBJ33_RS15540	PF01751	Toprim domain
BBJ33_RS15545	PF10830	Protein of unknown function (DUF2553)
BBJ33_RS15550	PF01597	Glycine cleavage H-protein
BBJ33_RS15555	PF03960	ArsC family
BBJ33_RS15560	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BBJ33_RS15560	PF02770	Acyl-CoA dehydrogenase, middle domain
BBJ33_RS15560	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BBJ33_RS15565	PF02803	Thiolase, C-terminal domain
BBJ33_RS15565	PF00108	Thiolase, N-terminal domain
BBJ33_RS15570	PF00378	Enoyl-CoA hydratase/isomerase
BBJ33_RS15570	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
BBJ33_RS15570	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
BBJ33_RS15575	PF14115	YuzL-like protein
BBJ33_RS15580	PF01619	Proline dehydrogenase
BBJ33_RS15590	PF07875	Coat F domain
BBJ33_RS15595	PF01047	MarR family
BBJ33_RS15600	PF07690	Major Facilitator Superfamily
BBJ33_RS15605	PF03466	LysR substrate binding domain
BBJ33_RS15605	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BBJ33_RS15610	PF06314	Acetoacetate decarboxylase (ADC)
BBJ33_RS15620	PF10835	Protein of unknown function (DUF2573)
BBJ33_RS15625	PF00005	ABC transporter
BBJ33_RS15630	PF14039	YusW-like protein
BBJ33_RS15640	PF00106	short chain dehydrogenase
BBJ33_RS15645	PF00210	Ferritin-like domain
BBJ33_RS15650	PF13180	PDZ domain
BBJ33_RS15655	PF00072	Response regulator receiver domain
BBJ33_RS15655	PF00486	Transcriptional regulatory protein, C terminal
BBJ33_RS15660	PF00512	His Kinase A (phospho-acceptor) domain
BBJ33_RS15660	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS15660	PF00672	HAMP domain
BBJ33_RS15665	PF00440	Bacterial regulatory proteins, tetR family
BBJ33_RS15670	PF00206	Lyase
BBJ33_RS15670	PF10415	Fumarase C C-terminus
BBJ33_RS15675	PF13113	Protein of unknown function (DUF3970)
BBJ33_RS15680	PF03323	Bacillus/Clostridium GerA spore germination protein
BBJ33_RS15685	PF03845	Spore germination protein
BBJ33_RS15690	PF05504	Spore germination B3/ GerAC like, C-terminal 
BBJ33_RS15695	PF00196	Bacterial regulatory proteins, luxR family
BBJ33_RS15695	PF00072	Response regulator receiver domain
BBJ33_RS15700	PF00672	HAMP domain
BBJ33_RS15700	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS15700	PF07730	Histidine kinase
BBJ33_RS15705	PF09922	Cell wall-active antibiotics response 4TMS YvqF
BBJ33_RS15710	PF13349	Putative adhesin
BBJ33_RS15715	PF04012	PspA/IM30 family
BBJ33_RS15725	PF07690	Major Facilitator Superfamily
BBJ33_RS15730	PF01923	Cobalamin adenosyltransferase
BBJ33_RS15735	PF00005	ABC transporter
BBJ33_RS15740	PF01032	FecCD transport family
BBJ33_RS15745	PF01497	Periplasmic binding protein
BBJ33_RS15750	PF00106	short chain dehydrogenase
BBJ33_RS15755	PF08450	SMP-30/Gluconolactonase/LRE-like region
BBJ33_RS15760	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS15760	PF00512	His Kinase A (phospho-acceptor) domain
BBJ33_RS15765	PF00486	Transcriptional regulatory protein, C terminal
BBJ33_RS15765	PF00072	Response regulator receiver domain
BBJ33_RS15775	PF04545	Sigma-70, region 4
BBJ33_RS15780	PF12841	YvrJ protein family
BBJ33_RS15785	PF00190	Cupin
BBJ33_RS15790	PF14184	Regulatory protein YrvL
BBJ33_RS15795	PF00005	ABC transporter
BBJ33_RS15800	PF01032	FecCD transport family
BBJ33_RS15805	PF01032	FecCD transport family
BBJ33_RS15810	PF01497	Periplasmic binding protein
BBJ33_RS15815	PF04072	Leucine carboxyl methyltransferase
BBJ33_RS15820	PF13520	Amino acid permease
BBJ33_RS15825	PF09575	Small spore protein J (Spore_SspJ)
BBJ33_RS15830	PF04307	LexA-binding, inner membrane-associated putative hydrolase
BBJ33_RS15835	PF00884	Sulfatase
BBJ33_RS15840	PF12728	Helix-turn-helix domain
BBJ33_RS15840	PF12727	PBP superfamily domain
BBJ33_RS15850	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS15855	PF00196	Bacterial regulatory proteins, luxR family
BBJ33_RS15855	PF00072	Response regulator receiver domain
BBJ33_RS15860	PF00672	HAMP domain
BBJ33_RS15860	PF07730	Histidine kinase
BBJ33_RS15860	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS15860	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
BBJ33_RS15865	PF00005	ABC transporter
BBJ33_RS15880	PF00248	Aldo/keto reductase family
BBJ33_RS15890	PF00999	Sodium/hydrogen exchanger family
BBJ33_RS15900	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
BBJ33_RS15900	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
BBJ33_RS15905	PF00667	FAD binding domain
BBJ33_RS15905	PF00175	Oxidoreductase NAD-binding domain 
BBJ33_RS15905	PF00258	Flavodoxin
BBJ33_RS15910	PF13538	UvrD-like helicase C-terminal domain
BBJ33_RS15915	PF03458	UPF0126 domain
BBJ33_RS15925	PF02600	Disulfide bond formation protein DsbB
BBJ33_RS15930	PF13462	Thioredoxin
BBJ33_RS15935	PF00403	Heavy-metal-associated domain
BBJ33_RS15940	PF00403	Heavy-metal-associated domain
BBJ33_RS15945	PF00403	Heavy-metal-associated domain
BBJ33_RS15950	PF02583	Metal-sensitive transcriptional repressor
BBJ33_RS15955	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BBJ33_RS15955	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BBJ33_RS15960	PF02525	Flavodoxin-like fold
BBJ33_RS15970	PF07690	Major Facilitator Superfamily
BBJ33_RS15985	PF00296	Luciferase-like monooxygenase
BBJ33_RS15990	PF00462	Glutaredoxin
BBJ33_RS15995	PF00296	Luciferase-like monooxygenase
BBJ33_RS16000	PF00005	ABC transporter
BBJ33_RS16005	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS16010	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS16015	PF00497	Bacterial extracellular solute-binding proteins, family 3
BBJ33_RS16020	PF00497	Bacterial extracellular solute-binding proteins, family 3
BBJ33_RS16025	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS16030	PF03466	LysR substrate binding domain
BBJ33_RS16030	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BBJ33_RS16035	PF00106	short chain dehydrogenase
BBJ33_RS16040	PF01337	Barstar (barnase inhibitor)
BBJ33_RS16050	PF01668	SmpB protein
BBJ33_RS16055	PF00575	S1 RNA binding domain
BBJ33_RS16055	PF08206	Ribonuclease B OB domain
BBJ33_RS16055	PF17876	Cold shock domain
BBJ33_RS16055	PF00773	RNB domain
BBJ33_RS16060	PF12146	Serine aminopeptidase, S33
BBJ33_RS16065	PF03840	Preprotein translocase SecG subunit
BBJ33_RS16070	PF01381	Helix-turn-helix
BBJ33_RS16085	PF01638	HxlR-like helix-turn-helix
BBJ33_RS16090	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS16090	PF00512	His Kinase A (phospho-acceptor) domain
BBJ33_RS16095	PF00072	Response regulator receiver domain
BBJ33_RS16095	PF00486	Transcriptional regulatory protein, C terminal
BBJ33_RS16110	PF00005	ABC transporter
BBJ33_RS16115	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS16120	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
BBJ33_RS16125	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS16130	PF00005	ABC transporter
BBJ33_RS16130	PF00571	CBS domain
BBJ33_RS16135	PF12802	MarR family
BBJ33_RS16140	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS16145	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
BBJ33_RS16150	PF00528	Binding-protein-dependent transport system inner membrane component
BBJ33_RS16155	PF00005	ABC transporter
BBJ33_RS16155	PF00571	CBS domain
BBJ33_RS16160	PF12802	MarR family
BBJ33_RS16165	PF01914	MarC family integral membrane protein
BBJ33_RS16180	PF13240	zinc-ribbon domain
BBJ33_RS16185	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS16200	PF02585	GlcNAc-PI de-N-acetylase
BBJ33_RS16215	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
BBJ33_RS16220	PF01370	NAD dependent epimerase/dehydratase family
BBJ33_RS16225	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
BBJ33_RS16230	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
BBJ33_RS16230	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
BBJ33_RS16230	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
BBJ33_RS16235	PF04389	Peptidase family M28
BBJ33_RS16235	PF02225	PA domain
BBJ33_RS16240	PF03952	Enolase, N-terminal domain
BBJ33_RS16240	PF00113	Enolase, C-terminal TIM barrel domain
BBJ33_RS16245	PF01676	Metalloenzyme superfamily
BBJ33_RS16245	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
BBJ33_RS16250	PF00121	Triosephosphate isomerase
BBJ33_RS16255	PF00162	Phosphoglycerate kinase
BBJ33_RS16265	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BBJ33_RS16265	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
BBJ33_RS16270	PF04198	Putative sugar-binding domain
BBJ33_RS16275	PF00083	Sugar (and other) transporter
BBJ33_RS16280	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS16285	PF00296	Luciferase-like monooxygenase
BBJ33_RS16295	PF03466	LysR substrate binding domain
BBJ33_RS16295	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BBJ33_RS16300	PF00892	EamA-like transporter family
BBJ33_RS16305	PF00324	Amino acid permease
BBJ33_RS16310	PF01380	SIS domain
BBJ33_RS16310	PF01418	Helix-turn-helix domain, rpiR family
BBJ33_RS16315	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BBJ33_RS16315	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BBJ33_RS16320	PF02447	GntP family permease
BBJ33_RS16325	PF02589	LUD domain
BBJ33_RS16330	PF11870	Domain of unknown function (DUF3390)
BBJ33_RS16330	PF02589	LUD domain
BBJ33_RS16330	PF13183	4Fe-4S dicluster domain
BBJ33_RS16335	PF02754	Cysteine-rich domain
BBJ33_RS16340	PF00155	Aminotransferase class I and II
BBJ33_RS16345	PF07729	FCD domain
BBJ33_RS16345	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS16350	PF02652	L-lactate permease
BBJ33_RS16355	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
BBJ33_RS16355	PF04552	Sigma-54, DNA binding domain
BBJ33_RS16355	PF04963	Sigma-54 factor, core binding domain
BBJ33_RS16360	PF09628	YvfG protein
BBJ33_RS16365	PF04230	Polysaccharide pyruvyl transferase
BBJ33_RS16370	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
BBJ33_RS16375	PF00132	Bacterial transferase hexapeptide (six repeats)
BBJ33_RS16375	PF17836	PglD N-terminal domain
BBJ33_RS16380	PF02397	Bacterial sugar transferase
BBJ33_RS16385	PF14667	Polysaccharide biosynthesis C-terminal domain
BBJ33_RS16385	PF01943	Polysaccharide biosynthesis protein
BBJ33_RS16390	PF00535	Glycosyl transferase family 2
BBJ33_RS16395	PF04230	Polysaccharide pyruvyl transferase
BBJ33_RS16400	PF00535	Glycosyl transferase family 2
BBJ33_RS16410	PF00534	Glycosyl transferases group 1
BBJ33_RS16410	PF13439	Glycosyltransferase Family 4
BBJ33_RS16415	PF00535	Glycosyl transferase family 2
BBJ33_RS16420	PF13439	Glycosyltransferase Family 4
BBJ33_RS16420	PF00534	Glycosyl transferases group 1
BBJ33_RS16425	PF02719	Polysaccharide biosynthesis protein
BBJ33_RS16430	PF13614	AAA domain
BBJ33_RS16435	PF02706	Chain length determinant protein
BBJ33_RS16440	PF01381	Helix-turn-helix
BBJ33_RS16440	PF08671	Anti-repressor SinI
BBJ33_RS16445	PF00135	Carboxylesterase family
BBJ33_RS16455	PF01872	RibD C-terminal domain
BBJ33_RS16465	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS16470	PF05870	Phenolic acid decarboxylase (PAD)
BBJ33_RS16495	PF00251	Glycosyl hydrolases family 32 N-terminal domain
BBJ33_RS16495	PF08244	Glycosyl hydrolases family 32 C terminal
BBJ33_RS16500	PF01306	LacY proton/sugar symporter
BBJ33_RS16505	PF00356	Bacterial regulatory proteins, lacI family
BBJ33_RS16510	PF00574	Clp protease
BBJ33_RS16515	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BBJ33_RS16515	PF03466	LysR substrate binding domain
BBJ33_RS16520	PF04303	PrpF protein
BBJ33_RS16525	PF00083	Sugar (and other) transporter
BBJ33_RS16530	PF03641	Possible lysine decarboxylase
BBJ33_RS16535	PF03819	MazG nucleotide pyrophosphohydrolase domain
BBJ33_RS16540	PF01740	STAS domain
BBJ33_RS16540	PF00916	Sulfate permease family
BBJ33_RS16545	PF00484	Carbonic anhydrase
BBJ33_RS16555	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BBJ33_RS16555	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BBJ33_RS16560	PF00545	ribonuclease
BBJ33_RS16565	PF00797	N-acetyltransferase
BBJ33_RS16570	PF00381	PTS HPr component phosphorylation site
BBJ33_RS16575	PF10298	WhiA N-terminal LAGLIDADG-like domain
BBJ33_RS16575	PF14527	WhiA LAGLIDADG-like domain
BBJ33_RS16575	PF02650	WhiA C-terminal HTH domain
BBJ33_RS16580	PF01933	Uncharacterised protein family UPF0052
BBJ33_RS16585	PF03668	P-loop ATPase protein family
BBJ33_RS16590	PF00293	NUDIX domain
BBJ33_RS16595	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BBJ33_RS16600	PF00877	NlpC/P60 family
BBJ33_RS16610	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS16610	PF18698	Histidine kinase sensor domain
BBJ33_RS16610	PF00989	PAS fold
BBJ33_RS16610	PF00512	His Kinase A (phospho-acceptor) domain
BBJ33_RS16610	PF00672	HAMP domain
BBJ33_RS16615	PF00072	Response regulator receiver domain
BBJ33_RS16615	PF00486	Transcriptional regulatory protein, C terminal
BBJ33_RS16625	PF00664	ABC transporter transmembrane region
BBJ33_RS16625	PF00005	ABC transporter
BBJ33_RS16630	PF01502	Phosphoribosyl-AMP cyclohydrolase
BBJ33_RS16630	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
BBJ33_RS16635	PF00977	Histidine biosynthesis protein
BBJ33_RS16640	PF00977	Histidine biosynthesis protein
BBJ33_RS16645	PF00117	Glutamine amidotransferase class-I
BBJ33_RS16650	PF00475	Imidazoleglycerol-phosphate dehydratase
BBJ33_RS16655	PF00815	Histidinol dehydrogenase
BBJ33_RS16660	PF01634	ATP phosphoribosyltransferase
BBJ33_RS16665	PF13393	Histidyl-tRNA synthetase
BBJ33_RS16670	PF13529	Peptidase_C39 like family
BBJ33_RS16675	PF14602	Hexapeptide repeat of succinyl-transferase
BBJ33_RS16680	PF13419	Haloacid dehalogenase-like hydrolase
BBJ33_RS16685	PF01790	Prolipoprotein diacylglyceryl transferase
BBJ33_RS16690	PF02603	HPr Serine kinase N terminus
BBJ33_RS16690	PF07475	HPr Serine kinase C-terminal domain
BBJ33_RS16695	PF01979	Amidohydrolase family
BBJ33_RS16700	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
BBJ33_RS16705	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS16705	PF07702	UTRA domain
BBJ33_RS16710	PF00440	Bacterial regulatory proteins, tetR family
BBJ33_RS16715	PF00149	Calcineurin-like phosphoesterase
BBJ33_RS16720	PF04020	Mycobacterial 4 TMS phage holin, superfamily IV
BBJ33_RS16725	PF04024	PspC domain
BBJ33_RS16730	PF13349	Putative adhesin
BBJ33_RS16745	PF17760	UvrA interaction domain
BBJ33_RS16745	PF00005	ABC transporter
BBJ33_RS16745	PF17755	UvrA DNA-binding domain
BBJ33_RS16750	PF17757	UvrB interaction domain
BBJ33_RS16750	PF12344	Ultra-violet resistance protein B
BBJ33_RS16750	PF02151	UvrB/uvrC motif
BBJ33_RS16750	PF00271	Helicase conserved C-terminal domain
BBJ33_RS16750	PF04851	Type III restriction enzyme, res subunit
BBJ33_RS16755	PF09964	Uncharacterized protein conserved in bacteria (DUF2198)
BBJ33_RS16760	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
BBJ33_RS16760	PF00391	PEP-utilising enzyme, mobile domain
BBJ33_RS16765	PF00440	Bacterial regulatory proteins, tetR family
BBJ33_RS16770	PF07690	Major Facilitator Superfamily
BBJ33_RS16780	PF00872	Transposase, Mutator family
BBJ33_RS16785	PF00975	Thioesterase domain
BBJ33_RS16795	PF17820	PDZ domain
BBJ33_RS16800	PF17423	Swarming motility protein
BBJ33_RS16805	PF17820	PDZ domain
BBJ33_RS16805	PF03572	Peptidase family S41
BBJ33_RS16805	PF01471	Putative peptidoglycan binding domain
BBJ33_RS16810	PF13229	Right handed beta helix region
BBJ33_RS16815	PF18075	FtsX extracellular domain
BBJ33_RS16815	PF02687	FtsX-like permease family
BBJ33_RS16820	PF00005	ABC transporter
BBJ33_RS16825	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
BBJ33_RS16830	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BBJ33_RS16830	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BBJ33_RS16835	PF00472	RF-1 domain
BBJ33_RS16835	PF03462	PCRF domain
BBJ33_RS16840	PF02810	SEC-C motif
BBJ33_RS16840	PF01043	SecA preprotein cross-linking domain
BBJ33_RS16840	PF07516	SecA Wing and Scaffold domain
BBJ33_RS16840	PF07517	SecA DEAD-like domain
BBJ33_RS16845	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
BBJ33_RS16845	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus
BBJ33_RS16860	PF02561	Flagellar protein FliS
BBJ33_RS16865	PF02465	Flagellar hook-associated protein 2 N-terminus
BBJ33_RS16865	PF07195	Flagellar hook-associated protein 2 C-terminus
BBJ33_RS16865	PF07196	Flagellin hook IN motif
BBJ33_RS16870	PF00700	Bacterial flagellin C-terminal helical region
BBJ33_RS16870	PF00669	Bacterial flagellin N-terminal helical region
BBJ33_RS16875	PF02599	Global regulator protein family
BBJ33_RS16880	PF02623	FliW protein
BBJ33_RS16890	PF00700	Bacterial flagellin C-terminal helical region
BBJ33_RS16890	PF00669	Bacterial flagellin N-terminal helical region
BBJ33_RS16895	PF00460	Flagella basal body rod protein
BBJ33_RS16895	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BBJ33_RS16900	PF05130	FlgN protein
BBJ33_RS16905	PF04316	Anti-sigma-28 factor, FlgM
BBJ33_RS16920	PF10719	Late competence development protein ComFB
BBJ33_RS16925	PF04851	Type III restriction enzyme, res subunit
BBJ33_RS16925	PF00271	Helicase conserved C-terminal domain
BBJ33_RS16930	PF02645	Uncharacterised protein, DegV family COG1307
BBJ33_RS16935	PF00072	Response regulator receiver domain
BBJ33_RS16935	PF00196	Bacterial regulatory proteins, luxR family
BBJ33_RS16940	PF05384	Sensor protein DegS
BBJ33_RS16940	PF07730	Histidine kinase
BBJ33_RS16940	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS16950	PF03816	Cell envelope-related transcriptional attenuator domain
BBJ33_RS16955	PF00953	Glycosyl transferase family 4
BBJ33_RS16965	PF00535	Glycosyl transferase family 2
BBJ33_RS16970	PF02706	Chain length determinant protein
BBJ33_RS16975	PF04932	O-Antigen ligase
BBJ33_RS16980	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
BBJ33_RS16980	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
BBJ33_RS16980	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
BBJ33_RS16985	PF00534	Glycosyl transferases group 1
BBJ33_RS16985	PF13439	Glycosyltransferase Family 4
BBJ33_RS16990	PF01943	Polysaccharide biosynthesis protein
BBJ33_RS16990	PF14667	Polysaccharide biosynthesis C-terminal domain
BBJ33_RS16995	PF02397	Bacterial sugar transferase
BBJ33_RS17000	PF01520	N-acetylmuramoyl-L-alanine amidase
BBJ33_RS17000	PF04122	Putative cell wall binding repeat 2
BBJ33_RS17005	PF04122	Putative cell wall binding repeat 2
BBJ33_RS17005	PF08486	Stage II sporulation protein
BBJ33_RS17015	PF03816	Cell envelope-related transcriptional attenuator domain
BBJ33_RS17020	PF02350	UDP-N-acetylglucosamine 2-epimerase
BBJ33_RS17025	PF00483	Nucleotidyl transferase
BBJ33_RS17030	PF00005	ABC transporter
BBJ33_RS17035	PF01061	ABC-2 type transporter
BBJ33_RS17040	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 
BBJ33_RS17045	PF18674	TarS beta-glycosyltransferase C-terminal domain 1
BBJ33_RS17045	PF00535	Glycosyl transferase family 2
BBJ33_RS17050	PF01467	Cytidylyltransferase-like
BBJ33_RS17055	PF03808	Glycosyl transferase WecB/TagA/CpsF family
BBJ33_RS17060	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 
BBJ33_RS17065	PF05036	Sporulation related domain
BBJ33_RS17065	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
BBJ33_RS17065	PF08239	Bacterial SH3 domain
BBJ33_RS17070	PF01238	Phosphomannose isomerase type I
BBJ33_RS17075	PF03323	Bacillus/Clostridium GerA spore germination protein
BBJ33_RS17080	PF03845	Spore germination protein
BBJ33_RS17085	PF05504	Spore germination B3/ GerAC like, C-terminal 
BBJ33_RS17095	PF00083	Sugar (and other) transporter
BBJ33_RS17100	PF03816	Cell envelope-related transcriptional attenuator domain
BBJ33_RS17110	PF04791	LMBR1-like membrane protein
BBJ33_RS17115	PF00877	NlpC/P60 family
BBJ33_RS17120	PF09587	Bacterial capsule synthesis protein PGA_cap
BBJ33_RS17125	PF14102	Capsule biosynthesis CapC
BBJ33_RS17130	PF08245	Mur ligase middle domain
BBJ33_RS17135	PF03323	Bacillus/Clostridium GerA spore germination protein
BBJ33_RS17140	PF03845	Spore germination protein
BBJ33_RS17150	PF00356	Bacterial regulatory proteins, lacI family
BBJ33_RS17155	PF00294	pfkB family carbohydrate kinase
BBJ33_RS17160	PF05025	RbsD / FucU transport protein family
BBJ33_RS17165	PF00005	ABC transporter
BBJ33_RS17170	PF02653	Branched-chain amino acid transport system / permease component
BBJ33_RS17175	PF13407	Periplasmic binding protein domain
BBJ33_RS17180	PF08239	Bacterial SH3 domain
BBJ33_RS17185	PF02525	Flavodoxin-like fold
BBJ33_RS17190	PF03306	Alpha-acetolactate decarboxylase
BBJ33_RS17195	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BBJ33_RS17195	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BBJ33_RS17195	PF00205	Thiamine pyrophosphate enzyme, central domain
BBJ33_RS17200	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BBJ33_RS17200	PF03466	LysR substrate binding domain
BBJ33_RS17205	PF02040	Arsenical pump membrane protein
BBJ33_RS17220	PF08757	CotH kinase protein
BBJ33_RS17230	PF01613	Flavin reductase like domain
BBJ33_RS17245	PF01037	Lrp/AsnC ligand binding domain
BBJ33_RS17245	PF13404	AsnC-type helix-turn-helix domain
BBJ33_RS17250	PF02417	Chromate transporter
BBJ33_RS17255	PF02417	Chromate transporter
BBJ33_RS17265	PF03358	NADPH-dependent FMN reductase
BBJ33_RS17270	PF03466	LysR substrate binding domain
BBJ33_RS17270	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BBJ33_RS17275	PF04493	Endonuclease V
BBJ33_RS17295	PF14449	Pre-toxin TG
BBJ33_RS17295	PF04740	LXG domain of WXG superfamily
BBJ33_RS17315	PF14431	YwqJ-like deaminase
BBJ33_RS17315	PF14449	Pre-toxin TG
BBJ33_RS17315	PF04740	LXG domain of WXG superfamily
BBJ33_RS17325	PF16888	Domain of unknown function (DUF5082)
BBJ33_RS17330	PF09234	Domain of unknown function (DUF1963)
BBJ33_RS17335	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
BBJ33_RS17335	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
BBJ33_RS17335	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
BBJ33_RS17345	PF13614	AAA domain
BBJ33_RS17350	PF02706	Chain length determinant protein
BBJ33_RS17350	PF13807	G-rich domain on putative tyrosine kinase
BBJ33_RS17360	PF04434	SWIM zinc finger
BBJ33_RS17365	PF00271	Helicase conserved C-terminal domain
BBJ33_RS17365	PF12419	SNF2 Helicase protein 
BBJ33_RS17365	PF00176	SNF2 family N-terminal domain
BBJ33_RS17375	PF00455	DeoR C terminal sensor domain
BBJ33_RS17375	PF08220	DeoR-like helix-turn-helix domain
BBJ33_RS17380	PF00436	Single-strand binding protein family
BBJ33_RS17390	PF14183	YwpF-like protein
BBJ33_RS17395	PF01741	Large-conductance mechanosensitive channel, MscL
BBJ33_RS17400	PF07977	FabA-like domain
BBJ33_RS17405	PF18801	response regulator aspartate phosphatase H, N terminal
BBJ33_RS17410	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BBJ33_RS17410	PF00460	Flagella basal body rod protein
BBJ33_RS17415	PF00460	Flagella basal body rod protein
BBJ33_RS17415	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BBJ33_RS17425	PF12116	Stage III sporulation protein D
BBJ33_RS17430	PF01047	MarR family
BBJ33_RS17435	PF07690	Major Facilitator Superfamily
BBJ33_RS17440	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
BBJ33_RS17445	PF07690	Major Facilitator Superfamily
BBJ33_RS17450	PF00857	Isochorismatase family
BBJ33_RS17455	PF00909	Ammonium Transporter Family
BBJ33_RS17460	PF00543	Nitrogen regulatory protein P-II
BBJ33_RS17465	PF01098	Cell cycle protein
BBJ33_RS17470	PF01569	PAP2 superfamily
BBJ33_RS17475	PF04892	VanZ like family 
BBJ33_RS17480	PF01551	Peptidase family M23
BBJ33_RS17485	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS17490	PF17319	Family of unknown function (DUF5362)
BBJ33_RS17495	PF17370	Family of unknown function (DUF5392)
BBJ33_RS17500	PF13396	Phospholipase_D-nuclease N-terminal
BBJ33_RS17500	PF13091	PLD-like domain
BBJ33_RS17505	PF17319	Family of unknown function (DUF5362)
BBJ33_RS17510	PF00457	Glycosyl hydrolases family 11
BBJ33_RS17520	PF02082	Transcriptional regulator
BBJ33_RS17525	PF00449	Urease alpha-subunit, N-terminal domain
BBJ33_RS17525	PF01979	Amidohydrolase family
BBJ33_RS17530	PF00699	Urease beta subunit
BBJ33_RS17535	PF00547	Urease, gamma subunit
BBJ33_RS17540	PF05532	CsbD-like
BBJ33_RS17550	PF18801	response regulator aspartate phosphatase H, N terminal
BBJ33_RS17550	PF17874	MalT-like TPR region
BBJ33_RS17555	PF06463	Molybdenum Cofactor Synthesis C
BBJ33_RS17555	PF04055	Radical SAM superfamily
BBJ33_RS17560	PF02634	FdhD/NarQ family
BBJ33_RS17565	PF00092	von Willebrand factor type A domain
BBJ33_RS17570	PF00092	von Willebrand factor type A domain
BBJ33_RS17575	PF08486	Stage II sporulation protein
BBJ33_RS17580	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
BBJ33_RS17585	PF08680	TATA-box binding
BBJ33_RS17590	PF06612	Protein of unknown function (DUF1146)
BBJ33_RS17600	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
BBJ33_RS17600	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
BBJ33_RS17605	PF02874	ATP synthase alpha/beta family, beta-barrel domain
BBJ33_RS17605	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BBJ33_RS17610	PF00231	ATP synthase
BBJ33_RS17615	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BBJ33_RS17615	PF02874	ATP synthase alpha/beta family, beta-barrel domain
BBJ33_RS17615	PF00306	ATP synthase alpha/beta chain, C terminal domain
BBJ33_RS17620	PF00213	ATP synthase delta (OSCP) subunit
BBJ33_RS17625	PF00430	ATP synthase B/B' CF(0)
BBJ33_RS17630	PF00137	ATP synthase subunit C
BBJ33_RS17635	PF00119	ATP synthase A chain
BBJ33_RS17640	PF03899	ATP synthase I chain
BBJ33_RS17650	PF00464	Serine hydroxymethyltransferase
BBJ33_RS17655	PF04260	Protein of unknown function (DUF436) 
BBJ33_RS17660	PF02502	Ribose/Galactose Isomerase
BBJ33_RS17665	PF01451	Low molecular weight phosphotyrosine protein phosphatase
BBJ33_RS17670	PF02659	Putative manganese efflux pump
BBJ33_RS17675	PF01300	Telomere recombination
BBJ33_RS17675	PF03481	Putative GTP-binding controlling metal-binding
BBJ33_RS17685	PF09551	Stage II sporulation protein R (spore_II_R)
BBJ33_RS17690	PF17094	Uncharacterised protein family (UPF0715)
BBJ33_RS17695	PF17247	Family of unknown function (DUF5316)
BBJ33_RS17700	PF17827	PrmC N-terminal domain
BBJ33_RS17700	PF05175	Methyltransferase small domain
BBJ33_RS17705	PF00472	RF-1 domain
BBJ33_RS17705	PF03462	PCRF domain
BBJ33_RS17710	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BBJ33_RS17715	PF13411	MerR HTH family regulatory protein
BBJ33_RS17720	PF03547	Membrane transport protein
BBJ33_RS17725	PF03949	Malic enzyme, NAD binding domain
BBJ33_RS17725	PF00390	Malic enzyme, N-terminal domain
BBJ33_RS17730	PF00265	Thymidine kinase
BBJ33_RS17735	PF01197	Ribosomal protein L31
BBJ33_RS17740	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BBJ33_RS17740	PF07498	Rho termination factor, N-terminal domain
BBJ33_RS17740	PF07497	Rho termination factor, RNA-binding domain
BBJ33_RS17745	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
BBJ33_RS17750	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
BBJ33_RS17755	PF00923	Transaldolase/Fructose-6-phosphate aldolase
BBJ33_RS17760	PF01116	Fructose-bisphosphate aldolase class-II
BBJ33_RS17765	PF00072	Response regulator receiver domain
BBJ33_RS17770	PF10740	Domain of unknown function (DUF2529)
BBJ33_RS17775	PF06418	CTP synthase N-terminus
BBJ33_RS17775	PF00117	Glutamine amidotransferase class-I
BBJ33_RS17780	PF05066	HB1, ASXL, restriction endonuclease HTH domain
BBJ33_RS17785	PF13183	4Fe-4S dicluster domain
BBJ33_RS17785	PF02754	Cysteine-rich domain
BBJ33_RS17790	PF13091	PLD-like domain
BBJ33_RS17795	PF03851	UV-endonuclease UvdE
BBJ33_RS17805	PF00664	ABC transporter transmembrane region
BBJ33_RS17805	PF00005	ABC transporter
BBJ33_RS17810	PF13091	PLD-like domain
BBJ33_RS17810	PF13396	Phospholipase_D-nuclease N-terminal
BBJ33_RS17820	PF02665	Nitrate reductase gamma subunit
BBJ33_RS17825	PF02613	Nitrate reductase delta subunit
BBJ33_RS17830	PF13247	4Fe-4S dicluster domain
BBJ33_RS17830	PF14711	Respiratory nitrate reductase beta C-terminal
BBJ33_RS17835	PF01568	Molydopterin dinucleotide binding domain
BBJ33_RS17835	PF00384	Molybdopterin oxidoreductase
BBJ33_RS17835	PF14710	Respiratory nitrate reductase alpha N-terminal
BBJ33_RS17845	PF14256	YwiC-like protein
BBJ33_RS17850	PF00027	Cyclic nucleotide-binding domain
BBJ33_RS17850	PF00325	Bacterial regulatory proteins, crp family
BBJ33_RS17855	PF07690	Major Facilitator Superfamily
BBJ33_RS17860	PF00750	tRNA synthetases class I (R)
BBJ33_RS17860	PF03485	Arginyl tRNA synthetase N terminal domain
BBJ33_RS17860	PF05746	DALR anticodon binding domain
BBJ33_RS17865	PF09148	Domain of unknown function (DUF1934)
BBJ33_RS17885	PF18801	response regulator aspartate phosphatase H, N terminal
BBJ33_RS17890	PF11131	Rap-phr extracellular signalling
BBJ33_RS17930	PF00491	Arginase family
BBJ33_RS17935	PF17284	Spermidine synthase tetramerisation domain
BBJ33_RS17940	PF00912	Transglycosylase
BBJ33_RS17940	PF00905	Penicillin binding protein transpeptidase domain
BBJ33_RS17950	PF08741	YwhD family
BBJ33_RS17955	PF02163	Peptidase family M50
BBJ33_RS17960	PF01361	Tautomerase enzyme
BBJ33_RS17965	PF01047	MarR family
BBJ33_RS17975	PF13520	Amino acid permease
BBJ33_RS17985	PF01966	HD domain
BBJ33_RS17990	PF07293	Protein of unknown function (DUF1450)
BBJ33_RS18000	PF03551	Transcriptional regulator PadR-like family
BBJ33_RS18010	PF00005	ABC transporter
BBJ33_RS18015	PF12679	ABC-2 family transporter protein
BBJ33_RS18040	PF03099	Biotin/lipoate A/B protein ligase family
BBJ33_RS18045	PF03466	LysR substrate binding domain
BBJ33_RS18045	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BBJ33_RS18050	PF03601	Conserved hypothetical protein 698
BBJ33_RS18055	PF01515	Phosphate acetyl/butaryl transferase
BBJ33_RS18060	PF06778	Chlorite dismutase
BBJ33_RS18070	PF00155	Aminotransferase class I and II
BBJ33_RS18075	PF07690	Major Facilitator Superfamily
BBJ33_RS18090	PF07883	Cupin domain
BBJ33_RS18100	PF07690	Major Facilitator Superfamily
BBJ33_RS18105	PF07690	Major Facilitator Superfamily
BBJ33_RS18110	PF00324	Amino acid permease
BBJ33_RS18115	PF01546	Peptidase family M20/M25/M40
BBJ33_RS18120	PF00171	Aldehyde dehydrogenase family
BBJ33_RS18125	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BBJ33_RS18125	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
BBJ33_RS18130	PF17735	Biofilm surface layer A
BBJ33_RS18135	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
BBJ33_RS18140	PF04321	RmlD substrate binding domain
BBJ33_RS18145	PF16363	GDP-mannose 4,6 dehydratase
BBJ33_RS18150	PF00483	Nucleotidyl transferase
BBJ33_RS18155	PF04101	Glycosyltransferase family 28 C-terminal domain
BBJ33_RS18160	PF02348	Cytidylyltransferase
BBJ33_RS18165	PF08666	SAF domain
BBJ33_RS18165	PF03102	NeuB family
BBJ33_RS18170	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS18175	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
BBJ33_RS18180	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 
BBJ33_RS18185	PF00535	Glycosyl transferase family 2
BBJ33_RS18190	PF09671	Spore coat protein (Spore_GerQ)
BBJ33_RS18195	PF04241	Protein of unknown function (DUF423)
BBJ33_RS18200	PF00860	Permease family
BBJ33_RS18205	PF17261	Family of unknown function (DUF5327)
BBJ33_RS18210	PF03167	Uracil DNA glycosylase superfamily
BBJ33_RS18215	PF00535	Glycosyl transferase family 2
BBJ33_RS18230	PF03551	Transcriptional regulator PadR-like family
BBJ33_RS18235	PF08543	Phosphomethylpyrimidine kinase
BBJ33_RS18245	PF08244	Glycosyl hydrolases family 32 C terminal
BBJ33_RS18245	PF00251	Glycosyl hydrolases family 32 N-terminal domain
BBJ33_RS18250	PF02378	Phosphotransferase system, EIIC 
BBJ33_RS18250	PF00367	phosphotransferase system, EIIB
BBJ33_RS18255	PF03123	CAT RNA binding domain
BBJ33_RS18255	PF00874	PRD domain
BBJ33_RS18265	PF02225	PA domain
BBJ33_RS18265	PF05922	Peptidase inhibitor I9
BBJ33_RS18265	PF13860	FlgD Ig-like domain
BBJ33_RS18265	PF00082	Subtilase family
BBJ33_RS18270	PF00296	Luciferase-like monooxygenase
BBJ33_RS18275	PF00881	Nitroreductase family
BBJ33_RS18280	PF01098	Cell cycle protein
BBJ33_RS18285	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS18290	PF17368	Spore morphogenesis and germination YwcE
BBJ33_RS18295	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
BBJ33_RS18300	PF00510	Cytochrome c oxidase subunit III
BBJ33_RS18305	PF00115	Cytochrome C and Quinol oxidase polypeptide I
BBJ33_RS18310	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
BBJ33_RS18310	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
BBJ33_RS18315	PF04226	Transglycosylase associated protein
BBJ33_RS18320	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
BBJ33_RS18320	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
BBJ33_RS18325	PF04138	GtrA-like protein
BBJ33_RS18330	PF00440	Bacterial regulatory proteins, tetR family
BBJ33_RS18335	PF08671	Anti-repressor SinI
BBJ33_RS18350	PF01323	DSBA-like thioredoxin domain
BBJ33_RS18355	PF04261	Dyp-type peroxidase family 
BBJ33_RS18355	PF10518	TAT (twin-arginine translocation) pathway signal sequence
BBJ33_RS18360	PF09375	Imelysin
BBJ33_RS18365	PF02581	Thiamine monophosphate synthase
BBJ33_RS18370	PF02110	Hydroxyethylthiazole kinase family
BBJ33_RS18375	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BBJ33_RS18375	PF03466	LysR substrate binding domain
BBJ33_RS18380	PF03788	LrgA family
BBJ33_RS18385	PF04172	LrgB-like family 
BBJ33_RS18390	PF09962	Uncharacterized conserved protein (DUF2196)
BBJ33_RS18395	PF13411	MerR HTH family regulatory protein
BBJ33_RS18395	PF07739	TipAS antibiotic-recognition domain
BBJ33_RS18400	PF10672	S-adenosylmethionine-dependent methyltransferase
BBJ33_RS18400	PF17785	PUA-like domain
BBJ33_RS18405	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BBJ33_RS18410	PF02378	Phosphotransferase system, EIIC 
BBJ33_RS18415	PF00082	Subtilase family
BBJ33_RS18420	PF01501	Glycosyl transferase family 8
BBJ33_RS18425	PF04607	Region found in RelA / SpoT proteins
BBJ33_RS18430	PF01040	UbiA prenyltransferase family
BBJ33_RS18435	PF12459	D-Ala-teichoic acid biosynthesis protein
BBJ33_RS18440	PF13193	AMP-binding enzyme C-terminal domain
BBJ33_RS18440	PF00501	AMP-binding enzyme
BBJ33_RS18445	PF03062	MBOAT, membrane-bound O-acyltransferase family
BBJ33_RS18450	PF00550	Phosphopantetheine attachment site
BBJ33_RS18455	PF04914	DltD protein
BBJ33_RS18460	PF01063	Amino-transferase class IV
BBJ33_RS18465	PF11975	Family 4 glycosyl hydrolase C-terminal domain
BBJ33_RS18465	PF02056	Family 4 glycosyl hydrolase
BBJ33_RS18470	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
BBJ33_RS18475	PF02378	Phosphotransferase system, EIIC 
BBJ33_RS18480	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BBJ33_RS18485	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BBJ33_RS18485	PF00874	PRD domain
BBJ33_RS18485	PF05043	Mga helix-turn-helix domain
BBJ33_RS18485	PF08279	HTH domain
BBJ33_RS18490	PF02245	Methylpurine-DNA glycosylase (MPG)
BBJ33_RS18495	PF01032	FecCD transport family
BBJ33_RS18500	PF01032	FecCD transport family
BBJ33_RS18510	PF01022	Bacterial regulatory protein, arsR family
BBJ33_RS18515	PF02040	Arsenical pump membrane protein
BBJ33_RS18520	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BBJ33_RS18525	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
BBJ33_RS18530	PF02378	Phosphotransferase system, EIIC 
BBJ33_RS18535	PF00232	Glycosyl hydrolase family 1
BBJ33_RS18540	PF00480	ROK family
BBJ33_RS18545	PF01238	Phosphomannose isomerase type I
BBJ33_RS18550	PF02156	Glycosyl hydrolase family 26
BBJ33_RS18555	PF00199	Catalase
BBJ33_RS18555	PF06628	Catalase-related immune-responsive
BBJ33_RS18560	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
BBJ33_RS18565	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
BBJ33_RS18570	PF01256	Carbohydrate kinase
BBJ33_RS18575	PF00005	ABC transporter
BBJ33_RS18575	PF00664	ABC transporter transmembrane region
BBJ33_RS18580	PF00005	ABC transporter
BBJ33_RS18580	PF00664	ABC transporter transmembrane region
BBJ33_RS18585	PF02322	Cytochrome bd terminal oxidase subunit II
BBJ33_RS18590	PF01654	Cytochrome bd terminal oxidase subunit I
BBJ33_RS18595	PF03390	2-hydroxycarboxylate transporter family
BBJ33_RS18600	PF01522	Polysaccharide deacetylase
BBJ33_RS18605	PF03459	TOBE domain
BBJ33_RS18605	PF17912	MalK OB fold domain
BBJ33_RS18605	PF00005	ABC transporter
BBJ33_RS18610	PF13556	PucR C-terminal helix-turn-helix domain
BBJ33_RS18615	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BBJ33_RS18615	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BBJ33_RS18620	PF11611	Domain of unknown function (DUF4352)
BBJ33_RS18625	PF16363	GDP-mannose 4,6 dehydratase
BBJ33_RS18630	PF07687	Peptidase dimerisation domain
BBJ33_RS18630	PF01546	Peptidase family M20/M25/M40
BBJ33_RS18635	PF04525	LURP-one-related
BBJ33_RS18640	PF01717	Cobalamin-independent synthase, Catalytic domain
BBJ33_RS18645	PF08241	Methyltransferase domain
BBJ33_RS18650	PF01773	Na+ dependent nucleoside transporter N-terminus
BBJ33_RS18650	PF07662	Na+ dependent nucleoside transporter C-terminus
BBJ33_RS18670	PF00199	Catalase
BBJ33_RS18670	PF18011	C-terminal domain found in long catalases
BBJ33_RS18670	PF06628	Catalase-related immune-responsive
BBJ33_RS18675	PF03600	Citrate transporter
BBJ33_RS18680	PF00722	Glycosyl hydrolases family 16
BBJ33_RS18690	PF11700	Vacuole effluxer Atg22 like
BBJ33_RS18695	PF03880	DbpA RNA binding domain   
BBJ33_RS18695	PF00270	DEAD/DEAH box helicase
BBJ33_RS18695	PF00271	Helicase conserved C-terminal domain
BBJ33_RS18710	PF14176	YxiJ-like protein
BBJ33_RS18755	PF05593	RHS Repeat
BBJ33_RS18760	PF00544	Pectate lyase
BBJ33_RS18765	PF00892	EamA-like transporter family
BBJ33_RS18770	PF00582	Universal stress protein family
BBJ33_RS18785	PF00293	NUDIX domain
BBJ33_RS18790	PF04616	Glycosyl hydrolases family 43
BBJ33_RS18790	PF16369	C-terminal lipocalin-like domain
BBJ33_RS18795	PF09021	HutP
BBJ33_RS18800	PF00221	Aromatic amino acid lyase
BBJ33_RS18805	PF17391	Urocanase N-terminal domain
BBJ33_RS18805	PF01175	Urocanase Rossmann-like domain
BBJ33_RS18805	PF17392	Urocanase C-terminal domain
BBJ33_RS18810	PF01979	Amidohydrolase family
BBJ33_RS18815	PF00491	Arginase family
BBJ33_RS18820	PF00324	Amino acid permease
BBJ33_RS18825	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
BBJ33_RS18825	PF00591	Glycosyl transferase family, a/b domain
BBJ33_RS18825	PF02885	Glycosyl transferase family, helical bundle domain
BBJ33_RS18830	PF07662	Na+ dependent nucleoside transporter C-terminus
BBJ33_RS18830	PF01773	Na+ dependent nucleoside transporter N-terminus
BBJ33_RS18835	PF01791	DeoC/LacD family aldolase
BBJ33_RS18840	PF04198	Putative sugar-binding domain
BBJ33_RS18855	PF11631	Protein of unknown function (DUF3255)
BBJ33_RS18875	PF01497	Periplasmic binding protein
BBJ33_RS18880	PF06486	Protein of unknown function (DUF1093)
BBJ33_RS18885	PF02687	FtsX-like permease family
BBJ33_RS18890	PF00005	ABC transporter
BBJ33_RS18895	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS18900	PF00072	Response regulator receiver domain
BBJ33_RS18900	PF00486	Transcriptional regulatory protein, C terminal
BBJ33_RS18905	PF01116	Fructose-bisphosphate aldolase class-II
BBJ33_RS18910	PF01261	Xylose isomerase-like TIM barrel
BBJ33_RS18915	PF01261	Xylose isomerase-like TIM barrel
BBJ33_RS18920	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BBJ33_RS18920	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BBJ33_RS18925	PF07690	Major Facilitator Superfamily
BBJ33_RS18930	PF01261	Xylose isomerase-like TIM barrel
BBJ33_RS18935	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BBJ33_RS18935	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BBJ33_RS18935	PF00205	Thiamine pyrophosphate enzyme, central domain
BBJ33_RS18940	PF00294	pfkB family carbohydrate kinase
BBJ33_RS18945	PF04962	KduI/IolB family
BBJ33_RS18950	PF00171	Aldehyde dehydrogenase family
BBJ33_RS18955	PF00455	DeoR C terminal sensor domain
BBJ33_RS18955	PF08220	DeoR-like helix-turn-helix domain
BBJ33_RS18960	PF00248	Aldo/keto reductase family
BBJ33_RS18965	PF00083	Sugar (and other) transporter
BBJ33_RS18970	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS18970	PF00183	Hsp90 protein
BBJ33_RS18985	PF00196	Bacterial regulatory proteins, luxR family
BBJ33_RS18985	PF00072	Response regulator receiver domain
BBJ33_RS18990	PF07730	Histidine kinase
BBJ33_RS18995	PF00487	Fatty acid desaturase
BBJ33_RS19000	PF00440	Bacterial regulatory proteins, tetR family
BBJ33_RS19005	PF00171	Aldehyde dehydrogenase family
BBJ33_RS19010	PF01011	PQQ enzyme repeat
BBJ33_RS19010	PF13360	PQQ-like domain
BBJ33_RS19010	PF13570	PQQ-like domain
BBJ33_RS19015	PF17369	Family of unknown function (DUF5391)
BBJ33_RS19025	PF07690	Major Facilitator Superfamily
BBJ33_RS19030	PF06271	RDD family
BBJ33_RS19040	PF00578	AhpC/TSA family
BBJ33_RS19045	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BBJ33_RS19045	PF13192	Thioredoxin domain
BBJ33_RS19050	PF00324	Amino acid permease
BBJ33_RS19055	PF06874	Firmicute fructose-1,6-bisphosphatase
BBJ33_RS19060	PF00111	2Fe-2S iron-sulfur cluster binding domain
BBJ33_RS19060	PF01799	[2Fe-2S] binding domain
BBJ33_RS19070	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BBJ33_RS19070	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
BBJ33_RS19070	PF00111	2Fe-2S iron-sulfur cluster binding domain
BBJ33_RS19070	PF01799	[2Fe-2S] binding domain
BBJ33_RS19075	PF12804	MobA-like NTP transferase domain
BBJ33_RS19080	PF13478	XdhC Rossmann domain
BBJ33_RS19080	PF02625	XdhC and CoxI family
BBJ33_RS19105	PF13286	Phosphohydrolase-associated domain
BBJ33_RS19105	PF01966	HD domain
BBJ33_RS19110	PF02590	Predicted SPOUT methyltransferase
BBJ33_RS19115	PF14116	YyzF-like protein
BBJ33_RS19135	PF00248	Aldo/keto reductase family
BBJ33_RS19140	PF00583	Acetyltransferase (GNAT) family
BBJ33_RS19145	PF18801	response regulator aspartate phosphatase H, N terminal
BBJ33_RS19150	PF00491	Arginase family
BBJ33_RS19155	PF00324	Amino acid permease
BBJ33_RS19160	PF00202	Aminotransferase class-III
BBJ33_RS19165	PF07853	Protein of unknown function (DUF1648)
BBJ33_RS19165	PF13630	SdpI/YhfL protein family
BBJ33_RS19170	PF01022	Bacterial regulatory protein, arsR family
BBJ33_RS19175	PF02954	Bacterial regulatory protein, Fis family
BBJ33_RS19175	PF13426	PAS domain
BBJ33_RS19175	PF00158	Sigma-54 interaction domain
BBJ33_RS19185	PF16326	ABC transporter C-terminal domain
BBJ33_RS19185	PF12848	ABC transporter
BBJ33_RS19185	PF00005	ABC transporter
BBJ33_RS19200	PF00899	ThiF family
BBJ33_RS19205	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS19205	PF00512	His Kinase A (phospho-acceptor) domain
BBJ33_RS19205	PF00989	PAS fold
BBJ33_RS19205	PF16736	Single Cache-like 
BBJ33_RS19210	PF00072	Response regulator receiver domain
BBJ33_RS19210	PF00486	Transcriptional regulatory protein, C terminal
BBJ33_RS19215	PF13180	PDZ domain
BBJ33_RS19220	PF00753	Metallo-beta-lactamase superfamily
BBJ33_RS19225	PF09648	YycH protein
BBJ33_RS19230	PF07435	YycH protein
BBJ33_RS19235	PF13426	PAS domain
BBJ33_RS19235	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BBJ33_RS19235	PF00672	HAMP domain
BBJ33_RS19235	PF00512	His Kinase A (phospho-acceptor) domain
BBJ33_RS19240	PF00072	Response regulator receiver domain
BBJ33_RS19240	PF00486	Transcriptional regulatory protein, C terminal
BBJ33_RS19270	PF00709	Adenylosuccinate synthetase
BBJ33_RS19275	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BBJ33_RS19280	PF00772	DnaB-like helicase N terminal domain
BBJ33_RS19280	PF03796	DnaB-like helicase C terminal domain
BBJ33_RS19285	PF09954	Uncharacterized protein conserved in bacteria (DUF2188)
BBJ33_RS19295	PF14174	YycC-like protein
BBJ33_RS19305	PF13439	Glycosyltransferase Family 4
BBJ33_RS19305	PF00534	Glycosyl transferases group 1
BBJ33_RS19315	PF02222	ATP-grasp domain
BBJ33_RS19320	PF00534	Glycosyl transferases group 1
BBJ33_RS19320	PF13439	Glycosyltransferase Family 4
BBJ33_RS19335	PF03948	Ribosomal protein L9, C-terminal domain
BBJ33_RS19335	PF01281	Ribosomal protein L9, N-terminal domain
BBJ33_RS19340	PF01368	DHH family
BBJ33_RS19340	PF02272	DHHA1 domain
BBJ33_RS19345	PF09991	Predicted membrane protein (DUF2232)
BBJ33_RS19350	PF07875	Coat F domain
BBJ33_RS19355	PF01638	HxlR-like helix-turn-helix
BBJ33_RS19360	PF01368	DHH family
BBJ33_RS19360	PF02833	DHHA2 domain
BBJ33_RS19365	PF00892	EamA-like transporter family
BBJ33_RS19370	PF02435	Levansucrase/Invertase
BBJ33_RS19375	PF08244	Glycosyl hydrolases family 32 C terminal
BBJ33_RS19375	PF00251	Glycosyl hydrolases family 32 N-terminal domain
BBJ33_RS19380	PF07729	FCD domain
BBJ33_RS19380	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS19385	PF05163	DinB family
BBJ33_RS19390	PF07690	Major Facilitator Superfamily
BBJ33_RS19400	PF00881	Nitroreductase family
BBJ33_RS19405	PF01047	MarR family
BBJ33_RS19410	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BBJ33_RS19410	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BBJ33_RS19415	PF01047	MarR family
BBJ33_RS19440	PF03466	LysR substrate binding domain
BBJ33_RS19440	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BBJ33_RS19450	PF00155	Aminotransferase class I and II
BBJ33_RS19450	PF00392	Bacterial regulatory proteins, gntR family
BBJ33_RS19455	PF00892	EamA-like transporter family
BBJ33_RS19460	PF02525	Flavodoxin-like fold
BBJ33_RS19465	PF02082	Transcriptional regulator
BBJ33_RS19470	PF01381	Helix-turn-helix
BBJ33_RS19475	PF00893	Small Multidrug Resistance protein
BBJ33_RS19480	PF03190	Protein of unknown function, DUF255
BBJ33_RS19485	PF02517	CPBP intramembrane metalloprotease
BBJ33_RS19490	PF00083	Sugar (and other) transporter
BBJ33_RS19495	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BBJ33_RS19500	PF00356	Bacterial regulatory proteins, lacI family
BBJ33_RS19500	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
BBJ33_RS19505	PF03372	Endonuclease/Exonuclease/phosphatase family
BBJ33_RS19510	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
BBJ33_RS19510	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
BBJ33_RS19515	PF12833	Helix-turn-helix domain
BBJ33_RS19515	PF02805	Metal binding domain of Ada
BBJ33_RS19520	PF01084	Ribosomal protein S18
BBJ33_RS19525	PF00436	Single-strand binding protein family
BBJ33_RS19530	PF01250	Ribosomal protein S6
BBJ33_RS19535	PF01926	50S ribosome-binding GTPase
BBJ33_RS19535	PF06071	Protein of unknown function (DUF933)
BBJ33_RS19540	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
BBJ33_RS19540	PF01568	Molydopterin dinucleotide binding domain
BBJ33_RS19540	PF00384	Molybdopterin oxidoreductase
BBJ33_RS19545	PF06107	Bacterial protein of unknown function (DUF951)
BBJ33_RS19560	PF06866	Protein of unknown function (DUF1256)
BBJ33_RS19565	PF17762	HTH domain found in ParB protein
BBJ33_RS19565	PF02195	ParB-like nuclease domain
BBJ33_RS19570	PF13614	AAA domain
BBJ33_RS19575	PF17762	HTH domain found in ParB protein
BBJ33_RS19575	PF02195	ParB-like nuclease domain
BBJ33_RS19580	PF02527	rRNA small subunit methyltransferase G
BBJ33_RS19585	PF01134	Glucose inhibited division protein A
BBJ33_RS19585	PF13932	GidA associated domain
BBJ33_RS19590	PF12631	MnmE helical domain
BBJ33_RS19590	PF10396	GTP-binding protein TrmE N-terminus
BBJ33_RS19590	PF01926	50S ribosome-binding GTPase
BBJ33_RS19595	PF01424	R3H domain
BBJ33_RS19595	PF14804	Jag N-terminus
BBJ33_RS19600	PF02096	60Kd inner membrane protein
BBJ33_RS19605	PF00825	Ribonuclease P
