BBJ33_RS00005	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
BBJ33_RS00010	SM00480	DNA polymerase III beta subunit
BBJ33_RS00030	SM00387	Histidine kinase-like ATPases
BBJ33_RS00030	SM00433	TopoisomeraseII
BBJ33_RS00035	SM00434	DNA Topoisomerase IV
BBJ33_RS00070	SM00116	Domain in cystathionine beta-synthase and other proteins.
BBJ33_RS00070	SM01240	BBJ33_RS00070
BBJ33_RS00075	SM00936	Penicillin-binding protein 5, C-terminal domain 
BBJ33_RS00115	SM00257	Lysin motif
BBJ33_RS00115	SM00636	BBJ33_RS00115
BBJ33_RS00135	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS00145	SM00493	BBJ33_RS00145
BBJ33_RS00240	SM00465	GIY-YIG type nucleases (URI domain)
BBJ33_RS00250	SM00966	SpoVT / AbrB like domain 
BBJ33_RS00265	SM01208	BBJ33_RS00265
BBJ33_RS00270	SM00493	BBJ33_RS00270
BBJ33_RS00275	SM00650	Ribosomal RNA adenine dimethylases
BBJ33_RS00320	SM01400	BBJ33_RS00320
BBJ33_RS00340	SM00487	DEAD-like helicases superfamily
BBJ33_RS00340	SM00490	helicase superfamily c-terminal domain
BBJ33_RS00340	SM00982	BBJ33_RS00340
BBJ33_RS00340	SM01058	CarD-like/TRCF domain
BBJ33_RS00345	SM00966	SpoVT / AbrB like domain 
BBJ33_RS00360	SM00363	S4 RNA-binding domain
BBJ33_RS00380	SM00316	Ribosomal protein S1-like RNA-binding domain
BBJ33_RS00395	SM00331	Sigma factor PP2C-like phosphatases
BBJ33_RS00395	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BBJ33_RS00405	SM00220	Serine/Threonine protein kinases, catalytic domain
BBJ33_RS00410	SM00977	TilS substrate C-terminal domain
BBJ33_RS00420	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS00465	SM00905	Dihydroneopterin aldolase
BBJ33_RS00475	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS00580	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS00580	SM01086	C-terminal, D2-small domain, of ClpB protein
BBJ33_RS00585	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS00595	SM00670	Large family of predicted nucleotide-binding domains
BBJ33_RS00620	SM00840	BBJ33_RS00620
BBJ33_RS00625	SM00535	Ribonuclease III family
BBJ33_RS00630	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BBJ33_RS00655	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BBJ33_RS00655	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BBJ33_RS00660	SM00649	Ribosomal protein L11/L12
BBJ33_RS00690	SM00663	RNA polymerase I subunit A N-terminus
BBJ33_RS00710	SM00838	Elongation factor G C-terminus
BBJ33_RS00710	SM00889	Elongation factor G, domain IV
BBJ33_RS00725	SM01403	BBJ33_RS00725
BBJ33_RS00745	SM01382	BBJ33_RS00745
BBJ33_RS00745	SM01383	BBJ33_RS00745
BBJ33_RS00760	SM00322	K homology RNA-binding domain
BBJ33_RS00780	SM01374	BBJ33_RS00780
BBJ33_RS00785	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BBJ33_RS00840	SM00316	Ribosomal protein S1-like RNA-binding domain
BBJ33_RS00860	SM00662	RNA polymerases D
BBJ33_RS00870	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS00875	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS00915	SM00646	BBJ33_RS00915
BBJ33_RS00930	SM01251	BBJ33_RS00930
BBJ33_RS01010	SM00829	Enoylreductase
BBJ33_RS01045	SM00342	helix_turn_helix, arabinose operon control protein
BBJ33_RS01140	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS01175	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS01195	SM00421	helix_turn_helix, Lux Regulon
BBJ33_RS01195	SM00448	cheY-homologous receiver domain
BBJ33_RS01200	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS01280	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS01315	SM00450	Rhodanese Homology Domain
BBJ33_RS01350	SM00387	Histidine kinase-like ATPases
BBJ33_RS01355	SM00448	cheY-homologous receiver domain
BBJ33_RS01440	SM00870	BBJ33_RS01440
BBJ33_RS01480	SM00028	Tetratricopeptide repeats
BBJ33_RS01490	SM00642	Alpha-amylase domain
BBJ33_RS01500	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS01550	SM00116	Domain in cystathionine beta-synthase and other proteins.
BBJ33_RS01550	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS01580	SM00632	BBJ33_RS01580
BBJ33_RS01580	SM00642	Alpha-amylase domain
BBJ33_RS01595	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS01700	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BBJ33_RS01740	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BBJ33_RS01750	SM00823	Phosphopantetheine attachment site
BBJ33_RS01755	SM00823	Phosphopantetheine attachment site
BBJ33_RS01760	SM00823	Phosphopantetheine attachment site
BBJ33_RS01785	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS01795	SM00062	Bacterial periplasmic substrate-binding proteins
BBJ33_RS01830	SM00710	Parallel beta-helix repeats
BBJ33_RS01830	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
BBJ33_RS01865	SM00062	Bacterial periplasmic substrate-binding proteins
BBJ33_RS01875	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS01890	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS01900	SM00448	cheY-homologous receiver domain
BBJ33_RS01900	SM00862	Transcriptional regulatory protein, C terminal
BBJ33_RS01905	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BBJ33_RS01905	SM00387	Histidine kinase-like ATPases
BBJ33_RS01905	SM00388	His Kinase A (phosphoacceptor) domain
BBJ33_RS01910	SM00028	Tetratricopeptide repeats
BBJ33_RS01935	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS01965	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BBJ33_RS01970	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBJ33_RS02005	SM00420	helix_turn_helix, Deoxyribose operon repressor
BBJ33_RS02055	SM00796	Allophanate hydrolase subunit 1
BBJ33_RS02060	SM00797	Allophanate hydrolase subunit 2
BBJ33_RS02065	SM00346	helix_turn_helix isocitrate lyase regulation
BBJ33_RS02135	SM00344	helix_turn_helix ASNC type
BBJ33_RS02140	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BBJ33_RS02140	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BBJ33_RS02140	SM00493	BBJ33_RS02140
BBJ33_RS02150	SM00267	diguanylate cyclase
BBJ33_RS02220	SM00028	Tetratricopeptide repeats
BBJ33_RS02310	SM00091	PAS domain
BBJ33_RS02310	SM00387	Histidine kinase-like ATPases
BBJ33_RS02315	SM00448	cheY-homologous receiver domain
BBJ33_RS02330	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS02380	SM00487	DEAD-like helicases superfamily
BBJ33_RS02380	SM00490	helicase superfamily c-terminal domain
BBJ33_RS02410	SM01005	Alanine racemase, C-terminal domain
BBJ33_RS02435	SM00387	Histidine kinase-like ATPases
BBJ33_RS02440	SM00331	Sigma factor PP2C-like phosphatases
BBJ33_RS02460	SM00331	Sigma factor PP2C-like phosphatases
BBJ33_RS02460	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BBJ33_RS02465	SM00316	Ribosomal protein S1-like RNA-binding domain
BBJ33_RS02465	SM00732	Likely ribonuclease with RNase H fold.
BBJ33_RS02470	SM00731	SprT homologues.
BBJ33_RS02560	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS02575	SM00357	Cold shock protein domain
BBJ33_RS02600	SM00450	Rhodanese Homology Domain
BBJ33_RS02605	SM00450	Rhodanese Homology Domain
BBJ33_RS02605	SM00849	Metallo-beta-lactamase superfamily
BBJ33_RS02650	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBJ33_RS02650	SM00895	BBJ33_RS02650
BBJ33_RS02670	SM00342	helix_turn_helix, arabinose operon control protein
BBJ33_RS02680	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBJ33_RS02735	SM01130	BBJ33_RS02735
BBJ33_RS02760	SM00829	Enoylreductase
BBJ33_RS02765	SM00422	helix_turn_helix, mercury resistance
BBJ33_RS02775	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBJ33_RS02825	SM00387	Histidine kinase-like ATPases
BBJ33_RS02830	SM00421	helix_turn_helix, Lux Regulon
BBJ33_RS02830	SM00448	cheY-homologous receiver domain
BBJ33_RS02845	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS02870	SM00825	Beta-ketoacyl synthase
BBJ33_RS02875	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS02890	SM00422	helix_turn_helix, mercury resistance
BBJ33_RS02910	SM01329	BBJ33_RS02910
BBJ33_RS02915	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBJ33_RS02915	SM00895	BBJ33_RS02915
BBJ33_RS02950	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBJ33_RS02950	SM00866	BBJ33_RS02950
BBJ33_RS02955	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBJ33_RS02955	SM00895	BBJ33_RS02955
BBJ33_RS02995	SM00829	Enoylreductase
BBJ33_RS03065	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS03075	SM00881	CoA binding domain
BBJ33_RS03100	SM00883	Chaperonin 10 Kd subunit
BBJ33_RS03150	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS03160	SM00028	Tetratricopeptide repeats
BBJ33_RS03160	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS03165	SM00829	Enoylreductase
BBJ33_RS03220	SM00829	Enoylreductase
BBJ33_RS03260	SM00460	Transglutaminase/protease-like homologues
BBJ33_RS03300	SM01001	AIR carboxylase
BBJ33_RS03310	SM00998	Adenylosuccinate lyase C-terminus
BBJ33_RS03325	SM01211	BBJ33_RS03325
BBJ33_RS03350	SM00798	AICARFT/IMPCHase bienzyme
BBJ33_RS03350	SM00851	MGS-like domain
BBJ33_RS03355	SM01209	BBJ33_RS03355
BBJ33_RS03355	SM01210	BBJ33_RS03355
BBJ33_RS03400	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BBJ33_RS03400	SM00292	breast cancer carboxy-terminal domain
BBJ33_RS03400	SM00532	Ligase N family
BBJ33_RS03435	SM00845	GatB domain
BBJ33_RS03450	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BBJ33_RS03465	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS03570	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS03640	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BBJ33_RS03655	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS03660	SM00422	helix_turn_helix, mercury resistance
BBJ33_RS03670	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS03675	SM00487	DEAD-like helicases superfamily
BBJ33_RS03675	SM00490	helicase superfamily c-terminal domain
BBJ33_RS03685	SM00829	Enoylreductase
BBJ33_RS03700	SM00656	BBJ33_RS03700
BBJ33_RS03725	SM00387	Histidine kinase-like ATPases
BBJ33_RS03725	SM00388	His Kinase A (phosphoacceptor) domain
BBJ33_RS03725	SM00448	cheY-homologous receiver domain
BBJ33_RS03730	SM00448	cheY-homologous receiver domain
BBJ33_RS03730	SM00862	Transcriptional regulatory protein, C terminal
BBJ33_RS03745	SM00091	PAS domain
BBJ33_RS03745	SM00387	Histidine kinase-like ATPases
BBJ33_RS03750	SM00448	cheY-homologous receiver domain
BBJ33_RS03765	SM00849	Metallo-beta-lactamase superfamily
BBJ33_RS03840	SM00642	Alpha-amylase domain
BBJ33_RS03845	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBJ33_RS03845	SM00866	BBJ33_RS03845
BBJ33_RS03875	SM00354	helix_turn _helix lactose operon repressor
BBJ33_RS03900	SM00226	Low molecular weight phosphatase family
BBJ33_RS03965	SM00478	endonuclease III
BBJ33_RS03995	SM00861	Transketolase, pyrimidine binding domain
BBJ33_RS04010	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS04035	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS04040	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS04095	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS04165	SM00287	Bacterial SH3 domain homologues
BBJ33_RS04195	SM00478	endonuclease III
BBJ33_RS04195	SM00525	BBJ33_RS04195
BBJ33_RS04225	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS04395	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS04400	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS04405	SM01060	BBJ33_RS04405
BBJ33_RS04415	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS04420	SM00062	Bacterial periplasmic substrate-binding proteins
BBJ33_RS04445	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS04460	SM00567	E-Z type HEAT repeats
BBJ33_RS04490	SM00763	PrkA AAA domain
BBJ33_RS04500	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS04530	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBJ33_RS04535	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS04540	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS04550	SM00357	Cold shock protein domain
BBJ33_RS04560	SM00267	diguanylate cyclase
BBJ33_RS04600	SM00363	S4 RNA-binding domain
BBJ33_RS04610	SM00116	Domain in cystathionine beta-synthase and other proteins.
BBJ33_RS04655	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BBJ33_RS04655	SM00387	Histidine kinase-like ATPases
BBJ33_RS04660	SM00421	helix_turn_helix, Lux Regulon
BBJ33_RS04660	SM00448	cheY-homologous receiver domain
BBJ33_RS04680	SM00257	Lysin motif
BBJ33_RS04700	SM00098	Alkaline phosphatase homologues
BBJ33_RS04705	SM00257	Lysin motif
BBJ33_RS04750	SM00563	Phosphate acyltransferases
BBJ33_RS04755	SM01091	Transporter associated domain
BBJ33_RS04760	SM00422	helix_turn_helix, mercury resistance
BBJ33_RS04770	SM00825	Beta-ketoacyl synthase
BBJ33_RS04775	SM01091	Transporter associated domain
BBJ33_RS04830	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS04835	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS04885	SM00729	Elongator protein 3, MiaB family, Radical SAM
BBJ33_RS04920	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS04940	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BBJ33_RS04980	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS05010	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS05095	SM00849	Metallo-beta-lactamase superfamily
BBJ33_RS05140	SM00855	Phosphoglycerate mutase family
BBJ33_RS05160	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BBJ33_RS05175	SM00914	BBJ33_RS05175
BBJ33_RS05200	SM00894	Excalibur calcium-binding domain
BBJ33_RS05240	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS05365	SM00342	helix_turn_helix, arabinose operon control protein
BBJ33_RS05370	SM00354	helix_turn _helix lactose operon repressor
BBJ33_RS05405	SM00316	Ribosomal protein S1-like RNA-binding domain
BBJ33_RS05415	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BBJ33_RS05415	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BBJ33_RS05470	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BBJ33_RS05490	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BBJ33_RS05495	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BBJ33_RS05550	SM00825	Beta-ketoacyl synthase
BBJ33_RS05560	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS05565	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS05610	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS05615	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS05670	SM01118	BBJ33_RS05670
BBJ33_RS05680	SM00954	Region found in RelA / SpoT proteins
BBJ33_RS05805	SM00849	Metallo-beta-lactamase superfamily
BBJ33_RS05815	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS05820	SM00966	SpoVT / AbrB like domain 
BBJ33_RS05915	SM00493	BBJ33_RS05915
BBJ33_RS05920	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS05970	SM00474	3'-5' exonuclease
BBJ33_RS05970	SM00482	DNA polymerase A domain
BBJ33_RS06060	SM00731	SprT homologues.
BBJ33_RS06115	SM00710	Parallel beta-helix repeats
BBJ33_RS06125	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS06140	SM00843	BBJ33_RS06140
BBJ33_RS06235	SM00047	Lysozyme subfamily 2
BBJ33_RS06245	SM00710	Parallel beta-helix repeats
BBJ33_RS06270	SM00257	Lysin motif
BBJ33_RS06270	SM00644	BBJ33_RS06270
BBJ33_RS06340	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS06380	SM00420	helix_turn_helix, Deoxyribose operon repressor
BBJ33_RS06380	SM01134	BBJ33_RS06380
BBJ33_RS06420	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BBJ33_RS06420	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BBJ33_RS06455	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS06490	SM00354	helix_turn _helix lactose operon repressor
BBJ33_RS06500	SM00858	BBJ33_RS06500
BBJ33_RS06505	SM00448	cheY-homologous receiver domain
BBJ33_RS06505	SM00862	Transcriptional regulatory protein, C terminal
BBJ33_RS06510	SM00387	Histidine kinase-like ATPases
BBJ33_RS06510	SM00388	His Kinase A (phosphoacceptor) domain
BBJ33_RS06515	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS06535	SM00421	helix_turn_helix, Lux Regulon
BBJ33_RS06535	SM00448	cheY-homologous receiver domain
BBJ33_RS06545	SM01260	BBJ33_RS06545
BBJ33_RS06550	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS06555	SM01260	BBJ33_RS06555
BBJ33_RS06570	SM00028	Tetratricopeptide repeats
BBJ33_RS06575	SM00257	Lysin motif
BBJ33_RS06575	SM00644	BBJ33_RS06575
BBJ33_RS06595	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS06610	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS06700	SM00257	Lysin motif
BBJ33_RS06765	SM00257	Lysin motif
BBJ33_RS06765	SM00644	BBJ33_RS06765
BBJ33_RS06810	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BBJ33_RS06835	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS06850	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BBJ33_RS06860	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS06900	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BBJ33_RS06915	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS06935	SM00028	Tetratricopeptide repeats
BBJ33_RS06950	SM00100	Cyclic nucleotide-monophosphate binding domain
BBJ33_RS06975	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS06985	SM00257	Lysin motif
BBJ33_RS06985	SM00636	BBJ33_RS06985
BBJ33_RS06990	SM00116	Domain in cystathionine beta-synthase and other proteins.
BBJ33_RS06990	SM00924	MgtE intracellular N domain
BBJ33_RS06995	SM00422	helix_turn_helix, mercury resistance
BBJ33_RS07005	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS07020	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
BBJ33_RS07080	SM00091	PAS domain
BBJ33_RS07080	SM00387	Histidine kinase-like ATPases
BBJ33_RS07080	SM00388	His Kinase A (phosphoacceptor) domain
BBJ33_RS07120	SM01007	Class II Aldolase and Adducin N-terminal domain
BBJ33_RS07135	SM00387	Histidine kinase-like ATPases
BBJ33_RS07135	SM00388	His Kinase A (phosphoacceptor) domain
BBJ33_RS07140	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS07155	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS07155	SM01086	C-terminal, D2-small domain, of ClpB protein
BBJ33_RS07195	SM00822	BBJ33_RS07195
BBJ33_RS07250	SM00354	helix_turn _helix lactose operon repressor
BBJ33_RS07255	SM01061	CAT RNA binding domain
BBJ33_RS07285	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BBJ33_RS07285	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BBJ33_RS07305	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BBJ33_RS07305	SM00091	PAS domain
BBJ33_RS07305	SM00387	Histidine kinase-like ATPases
BBJ33_RS07305	SM00388	His Kinase A (phosphoacceptor) domain
BBJ33_RS07315	SM00260	Two component signalling adaptor domain
BBJ33_RS07315	SM00448	cheY-homologous receiver domain
BBJ33_RS07330	SM00257	Lysin motif
BBJ33_RS07350	SM00052	Putative diguanylate phosphodiesterase
BBJ33_RS07440	SM00852	Probable molybdopterin binding domain
BBJ33_RS07470	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS07475	SM01066	Carbohydrate binding domain
BBJ33_RS07480	SM00420	helix_turn_helix, Deoxyribose operon repressor
BBJ33_RS07480	SM01134	BBJ33_RS07480
BBJ33_RS07505	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS07530	SM00966	SpoVT / AbrB like domain 
BBJ33_RS07535	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BBJ33_RS07535	SM00091	PAS domain
BBJ33_RS07535	SM00387	Histidine kinase-like ATPases
BBJ33_RS07535	SM00388	His Kinase A (phosphoacceptor) domain
BBJ33_RS07555	SM00849	Metallo-beta-lactamase superfamily
BBJ33_RS07585	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BBJ33_RS07590	SM00822	BBJ33_RS07590
BBJ33_RS07590	SM00823	Phosphopantetheine attachment site
BBJ33_RS07590	SM00825	Beta-ketoacyl synthase
BBJ33_RS07590	SM00826	BBJ33_RS07590
BBJ33_RS07590	SM01294	BBJ33_RS07590
BBJ33_RS07595	SM00822	BBJ33_RS07595
BBJ33_RS07595	SM00823	Phosphopantetheine attachment site
BBJ33_RS07595	SM00825	Beta-ketoacyl synthase
BBJ33_RS07595	SM00826	BBJ33_RS07595
BBJ33_RS07600	SM00822	BBJ33_RS07600
BBJ33_RS07600	SM00823	Phosphopantetheine attachment site
BBJ33_RS07600	SM00825	Beta-ketoacyl synthase
BBJ33_RS07600	SM01294	BBJ33_RS07600
BBJ33_RS07605	SM00822	BBJ33_RS07605
BBJ33_RS07605	SM00823	Phosphopantetheine attachment site
BBJ33_RS07605	SM00825	Beta-ketoacyl synthase
BBJ33_RS07605	SM01294	BBJ33_RS07605
BBJ33_RS07610	SM00822	BBJ33_RS07610
BBJ33_RS07610	SM00823	Phosphopantetheine attachment site
BBJ33_RS07610	SM00825	Beta-ketoacyl synthase
BBJ33_RS07610	SM01294	BBJ33_RS07610
BBJ33_RS07615	SM00822	BBJ33_RS07615
BBJ33_RS07615	SM00823	Phosphopantetheine attachment site
BBJ33_RS07615	SM00825	Beta-ketoacyl synthase
BBJ33_RS07615	SM01294	BBJ33_RS07615
BBJ33_RS07620	SM00822	BBJ33_RS07620
BBJ33_RS07620	SM00823	Phosphopantetheine attachment site
BBJ33_RS07620	SM01294	BBJ33_RS07620
BBJ33_RS07635	SM00861	Transketolase, pyrimidine binding domain
BBJ33_RS07725	SM00838	Elongation factor G C-terminus
BBJ33_RS07745	SM00670	Large family of predicted nucleotide-binding domains
BBJ33_RS07770	SM00878	Biotin carboxylase C-terminal domain
BBJ33_RS07815	SM00116	Domain in cystathionine beta-synthase and other proteins.
BBJ33_RS07920	SM00740	BBJ33_RS07920
BBJ33_RS07925	SM00740	BBJ33_RS07925
BBJ33_RS07965	SM00842	Cell division protein FtsA
BBJ33_RS07970	SM00864	Tubulin/FtsZ family, GTPase domain
BBJ33_RS07970	SM00865	Tubulin/FtsZ family, C-terminal domain
BBJ33_RS07995	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS08030	SM00363	S4 RNA-binding domain
BBJ33_RS08060	SM00363	S4 RNA-binding domain
BBJ33_RS08085	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BBJ33_RS08090	SM00851	MGS-like domain
BBJ33_RS08090	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BBJ33_RS08105	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BBJ33_RS08155	SM00831	Cation transporter/ATPase, N-terminus
BBJ33_RS08170	SM00072	Guanylate kinase homologues.
BBJ33_RS08175	SM01409	BBJ33_RS08175
BBJ33_RS08210	SM00331	Sigma factor PP2C-like phosphatases
BBJ33_RS08210	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BBJ33_RS08215	SM00220	Serine/Threonine protein kinases, catalytic domain
BBJ33_RS08215	SM00740	BBJ33_RS08215
BBJ33_RS08230	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
BBJ33_RS08250	SM01120	BBJ33_RS08250
BBJ33_RS08250	SM01121	BBJ33_RS08250
BBJ33_RS08265	SM00487	DEAD-like helicases superfamily
BBJ33_RS08265	SM00490	helicase superfamily c-terminal domain
BBJ33_RS08280	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BBJ33_RS08285	SM00822	BBJ33_RS08285
BBJ33_RS08295	SM00358	Double-stranded RNA binding motif
BBJ33_RS08295	SM00535	Ribonuclease III family
BBJ33_RS08300	SM00968	SMC proteins Flexible Hinge Domain
BBJ33_RS08305	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS08305	SM00962	SRP54-type protein, GTPase domain
BBJ33_RS08305	SM00963	SRP54-type protein, helical bundle domain
BBJ33_RS08320	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS08320	SM00962	SRP54-type protein, GTPase domain
BBJ33_RS08320	SM00963	SRP54-type protein, helical bundle domain
BBJ33_RS08380	SM00881	CoA binding domain
BBJ33_RS08390	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BBJ33_RS08390	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BBJ33_RS08390	SM00493	BBJ33_RS08390
BBJ33_RS08410	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS08410	SM01086	C-terminal, D2-small domain, of ClpB protein
BBJ33_RS08450	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS08500	SM00448	cheY-homologous receiver domain
BBJ33_RS08535	SM00962	SRP54-type protein, GTPase domain
BBJ33_RS08545	SM00448	cheY-homologous receiver domain
BBJ33_RS08550	SM00073	Histidine Phosphotransfer domain
BBJ33_RS08550	SM00260	Two component signalling adaptor domain
BBJ33_RS08550	SM00387	Histidine kinase-like ATPases
BBJ33_RS08550	SM01231	BBJ33_RS08550
BBJ33_RS08555	SM00260	Two component signalling adaptor domain
BBJ33_RS08615	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BBJ33_RS08625	SM00479	BBJ33_RS08625
BBJ33_RS08625	SM00481	DNA polymerase alpha chain like domain
BBJ33_RS08635	SM00316	Ribosomal protein S1-like RNA-binding domain
BBJ33_RS08635	SM00322	K homology RNA-binding domain
BBJ33_RS08670	SM00904	Riboflavin kinase
BBJ33_RS08675	SM01387	BBJ33_RS08675
BBJ33_RS08680	SM00316	Ribosomal protein S1-like RNA-binding domain
BBJ33_RS08680	SM00322	K homology RNA-binding domain
BBJ33_RS08710	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BBJ33_RS08720	SM01130	BBJ33_RS08720
BBJ33_RS08725	SM00849	Metallo-beta-lactamase superfamily
BBJ33_RS08740	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS08740	SM00843	BBJ33_RS08740
BBJ33_RS08745	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBJ33_RS08745	SM00866	BBJ33_RS08745
BBJ33_RS08755	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS08790	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS08800	SM00852	Probable molybdopterin binding domain
BBJ33_RS08805	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS08815	SM00322	K homology RNA-binding domain
BBJ33_RS08815	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BBJ33_RS08830	SM00829	Enoylreductase
BBJ33_RS08840	SM00729	Elongator protein 3, MiaB family, Radical SAM
BBJ33_RS08855	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BBJ33_RS08855	SM00534	ATPase domain of DNA mismatch repair MUTS family
BBJ33_RS08860	SM00853	MutL C terminal dimerisation domain
BBJ33_RS08860	SM01340	BBJ33_RS08860
BBJ33_RS08870	SM00849	Metallo-beta-lactamase superfamily
BBJ33_RS08875	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BBJ33_RS08880	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BBJ33_RS08885	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BBJ33_RS08910	SM00822	BBJ33_RS08910
BBJ33_RS08910	SM00823	Phosphopantetheine attachment site
BBJ33_RS08910	SM00825	Beta-ketoacyl synthase
BBJ33_RS08910	SM00826	BBJ33_RS08910
BBJ33_RS08910	SM01294	BBJ33_RS08910
BBJ33_RS08915	SM00822	BBJ33_RS08915
BBJ33_RS08915	SM00823	Phosphopantetheine attachment site
BBJ33_RS08915	SM00825	Beta-ketoacyl synthase
BBJ33_RS08915	SM00826	BBJ33_RS08915
BBJ33_RS08915	SM01294	BBJ33_RS08915
BBJ33_RS08920	SM00822	BBJ33_RS08920
BBJ33_RS08920	SM00823	Phosphopantetheine attachment site
BBJ33_RS08920	SM00825	Beta-ketoacyl synthase
BBJ33_RS08920	SM00826	BBJ33_RS08920
BBJ33_RS08920	SM01294	BBJ33_RS08920
BBJ33_RS08925	SM00822	BBJ33_RS08925
BBJ33_RS08925	SM00823	Phosphopantetheine attachment site
BBJ33_RS08925	SM00825	Beta-ketoacyl synthase
BBJ33_RS08925	SM00826	BBJ33_RS08925
BBJ33_RS08925	SM01294	BBJ33_RS08925
BBJ33_RS08930	SM00823	Phosphopantetheine attachment site
BBJ33_RS08930	SM00825	Beta-ketoacyl synthase
BBJ33_RS08930	SM01294	BBJ33_RS08930
BBJ33_RS09035	SM00646	BBJ33_RS09035
BBJ33_RS09045	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS09060	SM00422	helix_turn_helix, mercury resistance
BBJ33_RS09065	SM01230	BBJ33_RS09065
BBJ33_RS09130	SM00829	Enoylreductase
BBJ33_RS09180	SM00710	Parallel beta-helix repeats
BBJ33_RS09215	SM00257	Lysin motif
BBJ33_RS09220	SM00857	Resolvase, N terminal domain
BBJ33_RS09230	SM00861	Transketolase, pyrimidine binding domain
BBJ33_RS09255	SM00448	cheY-homologous receiver domain
BBJ33_RS09325	SM01207	BBJ33_RS09325
BBJ33_RS09330	SM00881	CoA binding domain
BBJ33_RS09335	SM00387	Histidine kinase-like ATPases
BBJ33_RS09335	SM00433	TopoisomeraseII
BBJ33_RS09340	SM00434	DNA Topoisomerase IV
BBJ33_RS09360	SM00829	Enoylreductase
BBJ33_RS09380	SM00354	helix_turn _helix lactose operon repressor
BBJ33_RS09410	SM01067	Cellulose binding domain
BBJ33_RS09420	SM00387	Histidine kinase-like ATPases
BBJ33_RS09420	SM00388	His Kinase A (phosphoacceptor) domain
BBJ33_RS09425	SM00448	cheY-homologous receiver domain
BBJ33_RS09425	SM00862	Transcriptional regulatory protein, C terminal
BBJ33_RS09435	SM00606	Cellulose Binding Domain Type IV
BBJ33_RS09440	SM00823	Phosphopantetheine attachment site
BBJ33_RS09440	SM00824	Thioesterase
BBJ33_RS09445	SM00823	Phosphopantetheine attachment site
BBJ33_RS09450	SM00823	Phosphopantetheine attachment site
BBJ33_RS09450	SM00825	Beta-ketoacyl synthase
BBJ33_RS09455	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BBJ33_RS09460	SM00822	BBJ33_RS09460
BBJ33_RS09465	SM00882	Coenzyme A transferase
BBJ33_RS09470	SM00882	Coenzyme A transferase
BBJ33_RS09485	SM00729	Elongator protein 3, MiaB family, Radical SAM
BBJ33_RS09485	SM00876	Biotin and Thiamin Synthesis associated domain
BBJ33_RS09545	SM00878	Biotin carboxylase C-terminal domain
BBJ33_RS09570	SM00824	Thioesterase
BBJ33_RS09575	SM00823	Phosphopantetheine attachment site
BBJ33_RS09575	SM01294	BBJ33_RS09575
BBJ33_RS09580	SM00823	Phosphopantetheine attachment site
BBJ33_RS09585	SM00823	Phosphopantetheine attachment site
BBJ33_RS09590	SM00823	Phosphopantetheine attachment site
BBJ33_RS09620	SM00860	SMI1 / KNR4 family
BBJ33_RS09630	SM00644	BBJ33_RS09630
BBJ33_RS09660	SM00710	Parallel beta-helix repeats
BBJ33_RS09665	SM00047	Lysozyme subfamily 2
BBJ33_RS09840	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS09845	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS09890	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BBJ33_RS09905	SM00829	Enoylreductase
BBJ33_RS09925	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BBJ33_RS09940	SM00822	BBJ33_RS09940
BBJ33_RS09970	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BBJ33_RS09980	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS09990	SM00822	BBJ33_RS09990
BBJ33_RS10015	SM00849	Metallo-beta-lactamase superfamily
BBJ33_RS10025	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BBJ33_RS10060	SM00257	Lysin motif
BBJ33_RS10065	SM00341	Helicase and RNase D C-terminal
BBJ33_RS10065	SM00487	DEAD-like helicases superfamily
BBJ33_RS10065	SM00490	helicase superfamily c-terminal domain
BBJ33_RS10065	SM00956	BBJ33_RS10065
BBJ33_RS10145	SM00849	Metallo-beta-lactamase superfamily
BBJ33_RS10155	SM00861	Transketolase, pyrimidine binding domain
BBJ33_RS10160	SM00327	von Willebrand factor (vWF) type A domain
BBJ33_RS10165	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS10175	SM00257	Lysin motif
BBJ33_RS10280	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBJ33_RS10280	SM00866	BBJ33_RS10280
BBJ33_RS10285	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BBJ33_RS10285	SM00245	tail specific protease
BBJ33_RS10315	SM00014	Acid phosphatase homologues
BBJ33_RS10365	SM00882	Coenzyme A transferase
BBJ33_RS10370	SM00882	Coenzyme A transferase
BBJ33_RS10380	SM00871	Bacterial transcription activator, effector binding domain
BBJ33_RS10470	SM00028	Tetratricopeptide repeats
BBJ33_RS10505	SM00860	SMI1 / KNR4 family
BBJ33_RS10510	SM00860	SMI1 / KNR4 family
BBJ33_RS10520	SM00860	SMI1 / KNR4 family
BBJ33_RS10530	SM00857	Resolvase, N terminal domain
BBJ33_RS10550	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS10625	SM00567	E-Z type HEAT repeats
BBJ33_RS10625	SM00932	Scaffold protein Nfu/NifU N terminal
BBJ33_RS10630	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BBJ33_RS10650	SM00357	Cold shock protein domain
BBJ33_RS10690	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BBJ33_RS10690	SM00475	5'-3' exonuclease
BBJ33_RS10760	SM00491	BBJ33_RS10760
BBJ33_RS10775	SM00981	BBJ33_RS10775
BBJ33_RS10800	SM00487	DEAD-like helicases superfamily
BBJ33_RS10800	SM00490	helicase superfamily c-terminal domain
BBJ33_RS10850	SM00060	Fibronectin type 3 domain
BBJ33_RS10860	SM00478	endonuclease III
BBJ33_RS10860	SM00525	BBJ33_RS10860
BBJ33_RS10890	SM00479	BBJ33_RS10890
BBJ33_RS10890	SM00487	DEAD-like helicases superfamily
BBJ33_RS10890	SM00491	BBJ33_RS10890
BBJ33_RS10930	SM00851	MGS-like domain
BBJ33_RS10950	SM00835	Cupin
BBJ33_RS10985	SM00914	BBJ33_RS10985
BBJ33_RS10990	SM00028	Tetratricopeptide repeats
BBJ33_RS11055	SM00138	Methyltransferase, chemotaxis proteins 
BBJ33_RS11060	SM00562	BBJ33_RS11060
BBJ33_RS11090	SM00411	bacterial (prokaryotic) histone like domain
BBJ33_RS11135	SM00316	Ribosomal protein S1-like RNA-binding domain
BBJ33_RS11170	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BBJ33_RS11190	SM00257	Lysin motif
BBJ33_RS11200	SM00487	DEAD-like helicases superfamily
BBJ33_RS11200	SM00490	helicase superfamily c-terminal domain
BBJ33_RS11235	SM00091	PAS domain
BBJ33_RS11235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BBJ33_RS11235	SM00387	Histidine kinase-like ATPases
BBJ33_RS11235	SM00388	His Kinase A (phosphoacceptor) domain
BBJ33_RS11240	SM00448	cheY-homologous receiver domain
BBJ33_RS11240	SM00862	Transcriptional regulatory protein, C terminal
BBJ33_RS11260	SM00363	S4 RNA-binding domain
BBJ33_RS11395	SM00387	Histidine kinase-like ATPases
BBJ33_RS11405	SM00936	Penicillin-binding protein 5, C-terminal domain 
BBJ33_RS11450	SM00919	Malic enzyme, NAD binding domain
BBJ33_RS11450	SM01274	BBJ33_RS11450
BBJ33_RS11465	SM00870	BBJ33_RS11465
BBJ33_RS11470	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS11570	SM00849	Metallo-beta-lactamase superfamily
BBJ33_RS11595	SM00823	Phosphopantetheine attachment site
BBJ33_RS11595	SM00825	Beta-ketoacyl synthase
BBJ33_RS11595	SM00829	Enoylreductase
BBJ33_RS11595	SM01294	BBJ33_RS11595
BBJ33_RS11600	SM00822	BBJ33_RS11600
BBJ33_RS11600	SM00823	Phosphopantetheine attachment site
BBJ33_RS11600	SM00825	Beta-ketoacyl synthase
BBJ33_RS11600	SM00826	BBJ33_RS11600
BBJ33_RS11605	SM00822	BBJ33_RS11605
BBJ33_RS11605	SM00823	Phosphopantetheine attachment site
BBJ33_RS11605	SM00825	Beta-ketoacyl synthase
BBJ33_RS11605	SM01294	BBJ33_RS11605
BBJ33_RS11610	SM00822	BBJ33_RS11610
BBJ33_RS11610	SM00823	Phosphopantetheine attachment site
BBJ33_RS11610	SM00825	Beta-ketoacyl synthase
BBJ33_RS11610	SM00826	BBJ33_RS11610
BBJ33_RS11610	SM01294	BBJ33_RS11610
BBJ33_RS11615	SM00822	BBJ33_RS11615
BBJ33_RS11615	SM00823	Phosphopantetheine attachment site
BBJ33_RS11615	SM00825	Beta-ketoacyl synthase
BBJ33_RS11615	SM00826	BBJ33_RS11615
BBJ33_RS11615	SM01294	BBJ33_RS11615
BBJ33_RS11620	SM00822	BBJ33_RS11620
BBJ33_RS11620	SM00823	Phosphopantetheine attachment site
BBJ33_RS11620	SM00825	Beta-ketoacyl synthase
BBJ33_RS11620	SM01294	BBJ33_RS11620
BBJ33_RS11625	SM00822	BBJ33_RS11625
BBJ33_RS11625	SM00823	Phosphopantetheine attachment site
BBJ33_RS11625	SM00825	Beta-ketoacyl synthase
BBJ33_RS11625	SM00826	BBJ33_RS11625
BBJ33_RS11625	SM01294	BBJ33_RS11625
BBJ33_RS11650	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BBJ33_RS11655	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BBJ33_RS11690	SM00849	Metallo-beta-lactamase superfamily
BBJ33_RS11700	SM01350	BBJ33_RS11700
BBJ33_RS11745	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS11755	SM00062	Bacterial periplasmic substrate-binding proteins
BBJ33_RS11755	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BBJ33_RS11765	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BBJ33_RS11775	SM00861	Transketolase, pyrimidine binding domain
BBJ33_RS11795	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BBJ33_RS11805	SM00091	PAS domain
BBJ33_RS11805	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS11850	SM00646	BBJ33_RS11850
BBJ33_RS11865	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS11890	SM01005	Alanine racemase, C-terminal domain
BBJ33_RS11895	SM00448	cheY-homologous receiver domain
BBJ33_RS11900	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BBJ33_RS11915	SM00363	S4 RNA-binding domain
BBJ33_RS11920	SM00861	Transketolase, pyrimidine binding domain
BBJ33_RS11955	SM00878	Biotin carboxylase C-terminal domain
BBJ33_RS12000	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS12010	SM00841	Elongation factor P, C-terminal
BBJ33_RS12010	SM01185	BBJ33_RS12010
BBJ33_RS12040	SM00529	Helix-turn-helix diphteria tox regulatory element
BBJ33_RS12050	SM00450	Rhodanese Homology Domain
BBJ33_RS12070	SM00487	DEAD-like helicases superfamily
BBJ33_RS12070	SM00490	helicase superfamily c-terminal domain
BBJ33_RS12085	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS12145	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS12155	SM01091	Transporter associated domain
BBJ33_RS12180	SM00849	Metallo-beta-lactamase superfamily
BBJ33_RS12200	SM00631	BBJ33_RS12200
BBJ33_RS12235	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS12240	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS12285	SM00257	Lysin motif
BBJ33_RS12320	SM00518	AP endonuclease family 2
BBJ33_RS12325	SM00487	DEAD-like helicases superfamily
BBJ33_RS12325	SM00490	helicase superfamily c-terminal domain
BBJ33_RS12360	SM00400	zinc finger
BBJ33_RS12360	SM00493	BBJ33_RS12360
BBJ33_RS12375	SM00116	Domain in cystathionine beta-synthase and other proteins.
BBJ33_RS12420	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BBJ33_RS12470	SM00729	Elongator protein 3, MiaB family, Radical SAM
BBJ33_RS12485	SM00271	DnaJ molecular chaperone homology domain
BBJ33_RS12505	SM00729	Elongator protein 3, MiaB family, Radical SAM
BBJ33_RS12510	SM00838	Elongation factor G C-terminus
BBJ33_RS12545	SM00849	Metallo-beta-lactamase superfamily
BBJ33_RS12555	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BBJ33_RS12575	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BBJ33_RS12585	SM01103	BBJ33_RS12585
BBJ33_RS12645	SM00342	helix_turn_helix, arabinose operon control protein
BBJ33_RS12645	SM00871	Bacterial transcription activator, effector binding domain
BBJ33_RS12710	SM00849	Metallo-beta-lactamase superfamily
BBJ33_RS12765	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BBJ33_RS12765	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BBJ33_RS12850	SM00732	Likely ribonuclease with RNase H fold.
BBJ33_RS12860	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BBJ33_RS12870	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS12875	SM00062	Bacterial periplasmic substrate-binding proteins
BBJ33_RS12875	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BBJ33_RS12905	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS12910	SM00028	Tetratricopeptide repeats
BBJ33_RS12930	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS12955	SM00287	Bacterial SH3 domain homologues
BBJ33_RS12955	SM00646	BBJ33_RS12955
BBJ33_RS12965	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BBJ33_RS12965	SM00954	Region found in RelA / SpoT proteins
BBJ33_RS13015	SM01323	BBJ33_RS13015
BBJ33_RS13035	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS13040	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BBJ33_RS13060	SM00257	Lysin motif
BBJ33_RS13105	SM01317	BBJ33_RS13105
BBJ33_RS13200	SM00257	Lysin motif
BBJ33_RS13210	SM01004	Delta-aminolevulinic acid dehydratase
BBJ33_RS13245	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS13245	SM00464	Found in ATP-dependent protease La (LON)
BBJ33_RS13250	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS13255	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS13255	SM00994	ClpX C4-type zinc finger
BBJ33_RS13255	SM01086	C-terminal, D2-small domain, of ClpB protein
BBJ33_RS13280	SM01329	BBJ33_RS13280
BBJ33_RS13285	SM00917	LeuA allosteric (dimerisation) domain
BBJ33_RS13330	SM00487	DEAD-like helicases superfamily
BBJ33_RS13330	SM00490	helicase superfamily c-terminal domain
BBJ33_RS13365	SM00909	Sporulation and spore germination
BBJ33_RS13375	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS13380	SM00421	helix_turn_helix, Lux Regulon
BBJ33_RS13415	SM00465	GIY-YIG type nucleases (URI domain)
BBJ33_RS13425	SM00813	Alpha-L-arabinofuranosidase C-terminus
BBJ33_RS13430	SM00893	Electron transfer flavoprotein domain
BBJ33_RS13435	SM00893	Electron transfer flavoprotein domain
BBJ33_RS13465	SM00463	Small MutS-related domain
BBJ33_RS13465	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BBJ33_RS13465	SM00534	ATPase domain of DNA mismatch repair MUTS family
BBJ33_RS13470	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BBJ33_RS13470	SM00481	DNA polymerase alpha chain like domain
BBJ33_RS13470	SM00483	DNA polymerase X family
BBJ33_RS13490	SM00873	B3/4 domain
BBJ33_RS13490	SM00874	tRNA synthetase B5 domain
BBJ33_RS13490	SM00896	Ferredoxin-fold anticodon binding domain
BBJ33_RS13500	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BBJ33_RS13530	SM00813	Alpha-L-arabinofuranosidase C-terminus
BBJ33_RS13560	SM01007	Class II Aldolase and Adducin N-terminal domain
BBJ33_RS13620	SM00448	cheY-homologous receiver domain
BBJ33_RS13620	SM00850	LytTr DNA-binding domain
BBJ33_RS13625	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BBJ33_RS13625	SM00387	Histidine kinase-like ATPases
BBJ33_RS13635	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BBJ33_RS13650	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS13670	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BBJ33_RS13700	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BBJ33_RS13700	SM01232	BBJ33_RS13700
BBJ33_RS13705	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BBJ33_RS13705	SM00474	3'-5' exonuclease
BBJ33_RS13705	SM00475	5'-3' exonuclease
BBJ33_RS13705	SM00482	DNA polymerase A domain
BBJ33_RS13710	SM00091	PAS domain
BBJ33_RS13710	SM00387	Histidine kinase-like ATPases
BBJ33_RS13710	SM00388	His Kinase A (phosphoacceptor) domain
BBJ33_RS13715	SM00448	cheY-homologous receiver domain
BBJ33_RS13715	SM00862	Transcriptional regulatory protein, C terminal
BBJ33_RS13725	SM01329	BBJ33_RS13725
BBJ33_RS13780	SM00919	Malic enzyme, NAD binding domain
BBJ33_RS13780	SM01274	BBJ33_RS13780
BBJ33_RS13785	SM00481	DNA polymerase alpha chain like domain
BBJ33_RS13815	SM00116	Domain in cystathionine beta-synthase and other proteins.
BBJ33_RS13820	SM00849	Metallo-beta-lactamase superfamily
BBJ33_RS13840	SM00852	Probable molybdopterin binding domain
BBJ33_RS13900	SM00981	BBJ33_RS13900
BBJ33_RS13935	SM00267	diguanylate cyclase
BBJ33_RS13940	SM00363	S4 RNA-binding domain
BBJ33_RS13940	SM01390	BBJ33_RS13940
BBJ33_RS13950	SM00860	SMI1 / KNR4 family
BBJ33_RS14025	SM00363	S4 RNA-binding domain
BBJ33_RS14040	SM00116	Domain in cystathionine beta-synthase and other proteins.
BBJ33_RS14060	SM00354	helix_turn _helix lactose operon repressor
BBJ33_RS14065	SM00830	Chorismate mutase type II
BBJ33_RS14090	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS14090	SM00843	BBJ33_RS14090
BBJ33_RS14125	SM00919	Malic enzyme, NAD binding domain
BBJ33_RS14125	SM01274	BBJ33_RS14125
BBJ33_RS14130	SM00849	Metallo-beta-lactamase superfamily
BBJ33_RS14150	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BBJ33_RS14185	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS14190	SM00420	helix_turn_helix, Deoxyribose operon repressor
BBJ33_RS14195	SM00363	S4 RNA-binding domain
BBJ33_RS14220	SM00354	helix_turn _helix lactose operon repressor
BBJ33_RS14250	SM00450	Rhodanese Homology Domain
BBJ33_RS14265	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BBJ33_RS14265	SM00091	PAS domain
BBJ33_RS14285	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS14290	SM00387	Histidine kinase-like ATPases
BBJ33_RS14295	SM00448	cheY-homologous receiver domain
BBJ33_RS14295	SM00862	Transcriptional regulatory protein, C terminal
BBJ33_RS14305	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS14325	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS14330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBJ33_RS14340	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BBJ33_RS14350	SM00729	Elongator protein 3, MiaB family, Radical SAM
BBJ33_RS14420	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS14460	SM01234	BBJ33_RS14460
BBJ33_RS14465	SM00947	Carbonic anhydrase
BBJ33_RS14490	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BBJ33_RS14655	SM00244	prohibitin homologues
BBJ33_RS14700	SM00047	Lysozyme subfamily 2
BBJ33_RS14710	SM00835	Cupin
BBJ33_RS14745	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BBJ33_RS14745	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BBJ33_RS14745	SM00319	Homologues of the ligand binding domain of Tar
BBJ33_RS14750	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BBJ33_RS14750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BBJ33_RS14750	SM00319	Homologues of the ligand binding domain of Tar
BBJ33_RS14755	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BBJ33_RS14755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BBJ33_RS14755	SM00319	Homologues of the ligand binding domain of Tar
BBJ33_RS14760	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BBJ33_RS14760	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BBJ33_RS14760	SM00319	Homologues of the ligand binding domain of Tar
BBJ33_RS14785	SM00642	Alpha-amylase domain
BBJ33_RS14790	SM01091	Transporter associated domain
BBJ33_RS14860	SM00316	Ribosomal protein S1-like RNA-binding domain
BBJ33_RS14870	SM00344	helix_turn_helix ASNC type
BBJ33_RS14890	SM00387	Histidine kinase-like ATPases
BBJ33_RS14890	SM00388	His Kinase A (phosphoacceptor) domain
BBJ33_RS14895	SM01298	BBJ33_RS14895
BBJ33_RS14900	SM00479	BBJ33_RS14900
BBJ33_RS14925	SM00091	PAS domain
BBJ33_RS14925	SM00387	Histidine kinase-like ATPases
BBJ33_RS14930	SM00448	cheY-homologous receiver domain
BBJ33_RS14940	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS15000	SM00421	helix_turn_helix, Lux Regulon
BBJ33_RS15000	SM00448	cheY-homologous receiver domain
BBJ33_RS15005	SM00387	Histidine kinase-like ATPases
BBJ33_RS15030	SM00052	Putative diguanylate phosphodiesterase
BBJ33_RS15070	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BBJ33_RS15115	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BBJ33_RS15115	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BBJ33_RS15125	SM00923	MbtH-like protein
BBJ33_RS15130	SM00823	Phosphopantetheine attachment site
BBJ33_RS15130	SM00824	Thioesterase
BBJ33_RS15150	SM00822	BBJ33_RS15150
BBJ33_RS15210	SM01240	BBJ33_RS15210
BBJ33_RS15225	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS15245	SM00422	helix_turn_helix, mercury resistance
BBJ33_RS15335	SM00729	Elongator protein 3, MiaB family, Radical SAM
BBJ33_RS15420	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS15425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBJ33_RS15425	SM00866	BBJ33_RS15425
BBJ33_RS15460	SM00465	GIY-YIG type nucleases (URI domain)
BBJ33_RS15505	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS15525	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS15525	SM00930	BBJ33_RS15525
BBJ33_RS15540	SM00493	BBJ33_RS15540
BBJ33_RS15595	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS15625	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS15650	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BBJ33_RS15655	SM00448	cheY-homologous receiver domain
BBJ33_RS15655	SM00862	Transcriptional regulatory protein, C terminal
BBJ33_RS15660	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BBJ33_RS15660	SM00387	Histidine kinase-like ATPases
BBJ33_RS15660	SM00388	His Kinase A (phosphoacceptor) domain
BBJ33_RS15695	SM00421	helix_turn_helix, Lux Regulon
BBJ33_RS15695	SM00448	cheY-homologous receiver domain
BBJ33_RS15700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BBJ33_RS15700	SM00387	Histidine kinase-like ATPases
BBJ33_RS15735	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS15760	SM00387	Histidine kinase-like ATPases
BBJ33_RS15760	SM00388	His Kinase A (phosphoacceptor) domain
BBJ33_RS15765	SM00448	cheY-homologous receiver domain
BBJ33_RS15765	SM00862	Transcriptional regulatory protein, C terminal
BBJ33_RS15785	SM00835	Cupin
BBJ33_RS15795	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS15855	SM00421	helix_turn_helix, Lux Regulon
BBJ33_RS15855	SM00448	cheY-homologous receiver domain
BBJ33_RS15865	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS15965	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS16000	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS16015	SM00062	Bacterial periplasmic substrate-binding proteins
BBJ33_RS16020	SM00062	Bacterial periplasmic substrate-binding proteins
BBJ33_RS16055	SM00316	Ribosomal protein S1-like RNA-binding domain
BBJ33_RS16055	SM00357	Cold shock protein domain
BBJ33_RS16055	SM00955	BBJ33_RS16055
BBJ33_RS16070	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS16075	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS16080	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS16090	SM00387	Histidine kinase-like ATPases
BBJ33_RS16090	SM00388	His Kinase A (phosphoacceptor) domain
BBJ33_RS16095	SM00448	cheY-homologous receiver domain
BBJ33_RS16095	SM00862	Transcriptional regulatory protein, C terminal
BBJ33_RS16110	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS16130	SM00116	Domain in cystathionine beta-synthase and other proteins.
BBJ33_RS16130	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS16155	SM00116	Domain in cystathionine beta-synthase and other proteins.
BBJ33_RS16155	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS16230	SM00984	UDP binding domain
BBJ33_RS16240	SM01192	BBJ33_RS16240
BBJ33_RS16240	SM01193	BBJ33_RS16240
BBJ33_RS16265	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BBJ33_RS16280	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBJ33_RS16345	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBJ33_RS16345	SM00895	BBJ33_RS16345
BBJ33_RS16440	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS16495	SM00640	Glycosyl hydrolases family 32
BBJ33_RS16505	SM00354	helix_turn _helix lactose operon repressor
BBJ33_RS16545	SM00947	Carbonic anhydrase
BBJ33_RS16605	SM00028	Tetratricopeptide repeats
BBJ33_RS16610	SM00387	Histidine kinase-like ATPases
BBJ33_RS16610	SM00388	His Kinase A (phosphoacceptor) domain
BBJ33_RS16615	SM00448	cheY-homologous receiver domain
BBJ33_RS16615	SM00862	Transcriptional regulatory protein, C terminal
BBJ33_RS16625	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS16705	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBJ33_RS16705	SM00866	BBJ33_RS16705
BBJ33_RS16745	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS16750	SM00487	DEAD-like helicases superfamily
BBJ33_RS16750	SM00490	helicase superfamily c-terminal domain
BBJ33_RS16795	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BBJ33_RS16805	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BBJ33_RS16805	SM00245	tail specific protease
BBJ33_RS16810	SM00710	Parallel beta-helix repeats
BBJ33_RS16820	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS16835	SM00937	BBJ33_RS16835
BBJ33_RS16840	SM00957	SecA DEAD-like domain
BBJ33_RS16840	SM00958	SecA preprotein cross-linking domain
BBJ33_RS16925	SM00487	DEAD-like helicases superfamily
BBJ33_RS16925	SM00490	helicase superfamily c-terminal domain
BBJ33_RS16935	SM00421	helix_turn_helix, Lux Regulon
BBJ33_RS16935	SM00448	cheY-homologous receiver domain
BBJ33_RS16940	SM00387	Histidine kinase-like ATPases
BBJ33_RS16980	SM00984	UDP binding domain
BBJ33_RS17000	SM00646	BBJ33_RS17000
BBJ33_RS17030	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS17065	SM00047	Lysozyme subfamily 2
BBJ33_RS17065	SM00287	Bacterial SH3 domain homologues
BBJ33_RS17120	SM00854	Bacterial capsule synthesis protein PGA_cap
BBJ33_RS17150	SM00354	helix_turn _helix lactose operon repressor
BBJ33_RS17165	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS17180	SM00287	Bacterial SH3 domain homologues
BBJ33_RS17230	SM00903	Flavin reductase like domain
BBJ33_RS17245	SM00344	helix_turn_helix ASNC type
BBJ33_RS17285	SM00860	SMI1 / KNR4 family
BBJ33_RS17290	SM00860	SMI1 / KNR4 family
BBJ33_RS17335	SM00984	UDP binding domain
BBJ33_RS17365	SM00487	DEAD-like helicases superfamily
BBJ33_RS17365	SM00490	helicase superfamily c-terminal domain
BBJ33_RS17375	SM00420	helix_turn_helix, Deoxyribose operon repressor
BBJ33_RS17375	SM01134	BBJ33_RS17375
BBJ33_RS17405	SM00028	Tetratricopeptide repeats
BBJ33_RS17430	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS17460	SM00938	Nitrogen regulatory protein P-II
BBJ33_RS17470	SM00014	Acid phosphatase homologues
BBJ33_RS17500	SM00155	Phospholipase D. Active site motifs.
BBJ33_RS17550	SM00028	Tetratricopeptide repeats
BBJ33_RS17555	SM00729	Elongator protein 3, MiaB family, Radical SAM
BBJ33_RS17565	SM00327	von Willebrand factor (vWF) type A domain
BBJ33_RS17570	SM00327	von Willebrand factor (vWF) type A domain
BBJ33_RS17605	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS17665	SM00226	Low molecular weight phosphatase family
BBJ33_RS17705	SM00937	BBJ33_RS17705
BBJ33_RS17725	SM00919	Malic enzyme, NAD binding domain
BBJ33_RS17725	SM01274	BBJ33_RS17725
BBJ33_RS17740	SM00357	Cold shock protein domain
BBJ33_RS17740	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS17740	SM00959	Rho termination factor, N-terminal domain
BBJ33_RS17765	SM00448	cheY-homologous receiver domain
BBJ33_RS17790	SM00155	Phospholipase D. Active site motifs.
BBJ33_RS17805	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS17810	SM00155	Phospholipase D. Active site motifs.
BBJ33_RS17835	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BBJ33_RS17850	SM00100	Cyclic nucleotide-monophosphate binding domain
BBJ33_RS17850	SM00419	helix_turn_helix, cAMP Regulatory protein
BBJ33_RS17860	SM00836	DALR anticodon binding domain
BBJ33_RS17860	SM01016	Arginyl tRNA synthetase N terminal dom
BBJ33_RS17885	SM00028	Tetratricopeptide repeats
BBJ33_RS17895	SM00530	Helix-turn-helix XRE-family like proteins 
BBJ33_RS17925	SM00421	helix_turn_helix, Lux Regulon
BBJ33_RS17965	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS17985	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BBJ33_RS18010	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS18125	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BBJ33_RS18165	SM00858	BBJ33_RS18165
BBJ33_RS18210	SM00986	Uracil DNA glycosylase superfamily
BBJ33_RS18210	SM00987	UreE urease accessory protein, C-terminal domain 
BBJ33_RS18245	SM00640	Glycosyl hydrolases family 32
BBJ33_RS18255	SM01061	CAT RNA binding domain
BBJ33_RS18395	SM00422	helix_turn_helix, mercury resistance
BBJ33_RS18400	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BBJ33_RS18425	SM00954	Region found in RelA / SpoT proteins
BBJ33_RS18510	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BBJ33_RS18555	SM01060	BBJ33_RS18555
BBJ33_RS18575	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS18580	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS18605	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS18670	SM01060	BBJ33_RS18670
BBJ33_RS18695	SM00487	DEAD-like helicases superfamily
BBJ33_RS18695	SM00490	helicase superfamily c-terminal domain
BBJ33_RS18760	SM00656	BBJ33_RS18760
BBJ33_RS18780	SM00487	DEAD-like helicases superfamily
BBJ33_RS18780	SM00490	helicase superfamily c-terminal domain
BBJ33_RS18825	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
BBJ33_RS18835	SM01133	BBJ33_RS18835
BBJ33_RS18890	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS18895	SM00387	Histidine kinase-like ATPases
BBJ33_RS18900	SM00448	cheY-homologous receiver domain
BBJ33_RS18900	SM00862	Transcriptional regulatory protein, C terminal
BBJ33_RS18955	SM00420	helix_turn_helix, Deoxyribose operon repressor
BBJ33_RS18955	SM01134	BBJ33_RS18955
BBJ33_RS18970	SM00387	Histidine kinase-like ATPases
BBJ33_RS18985	SM00421	helix_turn_helix, Lux Regulon
BBJ33_RS18985	SM00448	cheY-homologous receiver domain
BBJ33_RS19010	SM00564	beta-propeller repeat
BBJ33_RS19020	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BBJ33_RS19065	SM01092	CO dehydrogenase flavoprotein C-terminal domain
BBJ33_RS19070	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BBJ33_RS19105	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BBJ33_RS19145	SM00028	Tetratricopeptide repeats
BBJ33_RS19170	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BBJ33_RS19175	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS19180	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
BBJ33_RS19185	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS19205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BBJ33_RS19205	SM00387	Histidine kinase-like ATPases
BBJ33_RS19205	SM00388	His Kinase A (phosphoacceptor) domain
BBJ33_RS19215	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BBJ33_RS19220	SM00849	Metallo-beta-lactamase superfamily
BBJ33_RS19235	SM00091	PAS domain
BBJ33_RS19235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BBJ33_RS19235	SM00387	Histidine kinase-like ATPases
BBJ33_RS19235	SM00388	His Kinase A (phosphoacceptor) domain
BBJ33_RS19240	SM00448	cheY-homologous receiver domain
BBJ33_RS19240	SM00862	Transcriptional regulatory protein, C terminal
BBJ33_RS19270	SM00788	Adenylosuccinate synthetase
BBJ33_RS19280	SM00382	ATPases associated with a variety of cellular activities
BBJ33_RS19340	SM00267	diguanylate cyclase
BBJ33_RS19360	SM01131	BBJ33_RS19360
BBJ33_RS19375	SM00640	Glycosyl hydrolases family 32
BBJ33_RS19380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBJ33_RS19380	SM00895	BBJ33_RS19380
BBJ33_RS19405	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS19415	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBJ33_RS19450	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBJ33_RS19500	SM00354	helix_turn _helix lactose operon repressor
BBJ33_RS19515	SM00342	helix_turn_helix, arabinose operon control protein
BBJ33_RS19540	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BBJ33_RS19565	SM00470	ParB-like nuclease domain
BBJ33_RS19575	SM00470	ParB-like nuclease domain
BBJ33_RS19585	SM01228	BBJ33_RS19585
BBJ33_RS19595	SM00393	Putative single-stranded nucleic acids-binding domain
BBJ33_RS19595	SM01245	BBJ33_RS19595
