CF389_RS00035 SM00479 CF389_RS00035 CF389_RS00040 SM01298 CF389_RS00040 CF389_RS00045 SM00387 Histidine kinase-like ATPases CF389_RS00045 SM00388 His Kinase A (phosphoacceptor) domain CF389_RS00065 SM00344 helix_turn_helix ASNC type CF389_RS00075 SM00316 Ribosomal protein S1-like RNA-binding domain CF389_RS00150 SM01091 Transporter associated domain CF389_RS00155 SM00642 Alpha-amylase domain CF389_RS00180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CF389_RS00180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CF389_RS00180 SM00319 Homologues of the ligand binding domain of Tar CF389_RS00185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CF389_RS00185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CF389_RS00185 SM00319 Homologues of the ligand binding domain of Tar CF389_RS00190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CF389_RS00190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CF389_RS00190 SM00319 Homologues of the ligand binding domain of Tar CF389_RS00195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CF389_RS00195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CF389_RS00195 SM00319 Homologues of the ligand binding domain of Tar CF389_RS00230 SM00835 Cupin CF389_RS00240 SM00047 Lysozyme subfamily 2 CF389_RS00285 SM00244 prohibitin homologues CF389_RS00450 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CF389_RS00480 SM00947 Carbonic anhydrase CF389_RS00485 SM01234 CF389_RS00485 CF389_RS00525 SM00382 ATPases associated with a variety of cellular activities CF389_RS00595 SM00729 Elongator protein 3, MiaB family, Radical SAM CF389_RS00605 SM00345 helix_turn_helix gluconate operon transcriptional repressor CF389_RS00610 SM00382 ATPases associated with a variety of cellular activities CF389_RS00630 SM00382 ATPases associated with a variety of cellular activities CF389_RS00640 SM00448 cheY-homologous receiver domain CF389_RS00640 SM00862 Transcriptional regulatory protein, C terminal CF389_RS00645 SM00387 Histidine kinase-like ATPases CF389_RS00650 SM00382 ATPases associated with a variety of cellular activities CF389_RS00670 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CF389_RS00670 SM00091 PAS domain CF389_RS00685 SM00450 Rhodanese Homology Domain CF389_RS00715 SM00354 helix_turn _helix lactose operon repressor CF389_RS00740 SM00363 S4 RNA-binding domain CF389_RS00745 SM00420 helix_turn_helix, Deoxyribose operon repressor CF389_RS00755 SM00382 ATPases associated with a variety of cellular activities CF389_RS00790 SM00046 Diacylglycerol kinase catalytic domain (presumed) CF389_RS00810 SM00849 Metallo-beta-lactamase superfamily CF389_RS00815 SM00919 Malic enzyme, NAD binding domain CF389_RS00815 SM01274 CF389_RS00815 CF389_RS00850 SM00382 ATPases associated with a variety of cellular activities CF389_RS00850 SM00843 CF389_RS00850 CF389_RS00875 SM00830 Chorismate mutase type II CF389_RS00880 SM00354 helix_turn _helix lactose operon repressor CF389_RS00900 SM00116 Domain in cystathionine beta-synthase and other proteins. CF389_RS00920 SM00363 S4 RNA-binding domain CF389_RS00975 SM00860 SMI1 / KNR4 family CF389_RS00990 SM00363 S4 RNA-binding domain CF389_RS00990 SM01390 CF389_RS00990 CF389_RS01000 SM00267 diguanylate cyclase CF389_RS01035 SM00981 CF389_RS01035 CF389_RS01095 SM00852 Probable molybdopterin binding domain CF389_RS01120 SM00849 Metallo-beta-lactamase superfamily CF389_RS01125 SM00116 Domain in cystathionine beta-synthase and other proteins. CF389_RS01155 SM00481 DNA polymerase alpha chain like domain CF389_RS01160 SM00919 Malic enzyme, NAD binding domain CF389_RS01160 SM01274 CF389_RS01160 CF389_RS01220 SM01329 CF389_RS01220 CF389_RS01230 SM00448 cheY-homologous receiver domain CF389_RS01230 SM00862 Transcriptional regulatory protein, C terminal CF389_RS01235 SM00091 PAS domain CF389_RS01235 SM00387 Histidine kinase-like ATPases CF389_RS01235 SM00388 His Kinase A (phosphoacceptor) domain CF389_RS01240 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CF389_RS01240 SM00474 3'-5' exonuclease CF389_RS01240 SM00475 5'-3' exonuclease CF389_RS01240 SM00482 DNA polymerase A domain CF389_RS01245 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CF389_RS01245 SM01232 CF389_RS01245 CF389_RS01275 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CF389_RS01295 SM00382 ATPases associated with a variety of cellular activities CF389_RS01310 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CF389_RS01320 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CF389_RS01320 SM00387 Histidine kinase-like ATPases CF389_RS01325 SM00448 cheY-homologous receiver domain CF389_RS01325 SM00850 LytTr DNA-binding domain CF389_RS01385 SM01007 Class II Aldolase and Adducin N-terminal domain CF389_RS01415 SM00813 Alpha-L-arabinofuranosidase C-terminus CF389_RS01445 SM00967 RNA 2'-O ribose methyltransferase substrate binding CF389_RS01455 SM00873 B3/4 domain CF389_RS01455 SM00874 tRNA synthetase B5 domain CF389_RS01455 SM00896 Ferredoxin-fold anticodon binding domain CF389_RS01475 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CF389_RS01475 SM00481 DNA polymerase alpha chain like domain CF389_RS01475 SM00483 DNA polymerase X family CF389_RS01480 SM00463 Small MutS-related domain CF389_RS01480 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CF389_RS01480 SM00534 ATPase domain of DNA mismatch repair MUTS family CF389_RS01510 SM00893 Electron transfer flavoprotein domain CF389_RS01515 SM00893 Electron transfer flavoprotein domain CF389_RS01520 SM00813 Alpha-L-arabinofuranosidase C-terminus CF389_RS01530 SM00465 GIY-YIG type nucleases (URI domain) CF389_RS01570 SM00421 helix_turn_helix, Lux Regulon CF389_RS01575 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS01585 SM00909 Sporulation and spore germination CF389_RS01640 SM00917 LeuA allosteric (dimerisation) domain CF389_RS01645 SM01329 CF389_RS01645 CF389_RS01670 SM00382 ATPases associated with a variety of cellular activities CF389_RS01670 SM00994 ClpX C4-type zinc finger CF389_RS01670 SM01086 C-terminal, D2-small domain, of ClpB protein CF389_RS01675 SM00382 ATPases associated with a variety of cellular activities CF389_RS01680 SM00382 ATPases associated with a variety of cellular activities CF389_RS01680 SM00464 Found in ATP-dependent protease La (LON) CF389_RS01715 SM01004 Delta-aminolevulinic acid dehydratase CF389_RS01725 SM00257 Lysin motif CF389_RS01820 SM01317 CF389_RS01820 CF389_RS01865 SM00257 Lysin motif CF389_RS01885 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CF389_RS01890 SM00382 ATPases associated with a variety of cellular activities CF389_RS01910 SM01323 CF389_RS01910 CF389_RS01960 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CF389_RS01960 SM00954 Region found in RelA / SpoT proteins CF389_RS01970 SM00287 Bacterial SH3 domain homologues CF389_RS01970 SM00646 CF389_RS01970 CF389_RS02000 SM00382 ATPases associated with a variety of cellular activities CF389_RS02020 SM00028 Tetratricopeptide repeats CF389_RS02025 SM00382 ATPases associated with a variety of cellular activities CF389_RS02055 SM00062 Bacterial periplasmic substrate-binding proteins CF389_RS02055 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CF389_RS02060 SM00382 ATPases associated with a variety of cellular activities CF389_RS02070 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CF389_RS02080 SM00732 Likely ribonuclease with RNase H fold. CF389_RS02165 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CF389_RS02165 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CF389_RS02220 SM00849 Metallo-beta-lactamase superfamily CF389_RS02290 SM00342 helix_turn_helix, arabinose operon control protein CF389_RS02290 SM00871 Bacterial transcription activator, effector binding domain CF389_RS02305 SM00860 SMI1 / KNR4 family CF389_RS02380 SM01103 CF389_RS02380 CF389_RS02390 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CF389_RS02410 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CF389_RS02420 SM00849 Metallo-beta-lactamase superfamily CF389_RS02455 SM00838 Elongation factor G C-terminus CF389_RS02460 SM00729 Elongator protein 3, MiaB family, Radical SAM CF389_RS02480 SM00271 DnaJ molecular chaperone homology domain CF389_RS02495 SM00729 Elongator protein 3, MiaB family, Radical SAM CF389_RS02545 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CF389_RS02590 SM00116 Domain in cystathionine beta-synthase and other proteins. CF389_RS02605 SM00400 zinc finger CF389_RS02605 SM00493 CF389_RS02605 CF389_RS02640 SM00487 DEAD-like helicases superfamily CF389_RS02640 SM00490 helicase superfamily c-terminal domain CF389_RS02645 SM00518 AP endonuclease family 2 CF389_RS02680 SM00257 Lysin motif CF389_RS02725 SM00382 ATPases associated with a variety of cellular activities CF389_RS02730 SM00382 ATPases associated with a variety of cellular activities CF389_RS02775 SM00631 CF389_RS02775 CF389_RS02795 SM00849 Metallo-beta-lactamase superfamily CF389_RS02820 SM01091 Transporter associated domain CF389_RS02830 SM00382 ATPases associated with a variety of cellular activities CF389_RS02890 SM00530 Helix-turn-helix XRE-family like proteins CF389_RS02905 SM00487 DEAD-like helicases superfamily CF389_RS02905 SM00490 helicase superfamily c-terminal domain CF389_RS02925 SM00450 Rhodanese Homology Domain CF389_RS02935 SM00529 Helix-turn-helix diphteria tox regulatory element CF389_RS02965 SM00841 Elongation factor P, C-terminal CF389_RS02965 SM01185 CF389_RS02965 CF389_RS02975 SM00382 ATPases associated with a variety of cellular activities CF389_RS03020 SM00878 Biotin carboxylase C-terminal domain CF389_RS03055 SM00861 Transketolase, pyrimidine binding domain CF389_RS03060 SM00363 S4 RNA-binding domain CF389_RS03075 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CF389_RS03080 SM00448 cheY-homologous receiver domain CF389_RS03085 SM01005 Alanine racemase, C-terminal domain CF389_RS03105 SM00530 Helix-turn-helix XRE-family like proteins CF389_RS03120 SM00646 CF389_RS03120 CF389_RS03165 SM00091 PAS domain CF389_RS03165 SM00382 ATPases associated with a variety of cellular activities CF389_RS03175 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CF389_RS03195 SM00861 Transketolase, pyrimidine binding domain CF389_RS03205 SM00046 Diacylglycerol kinase catalytic domain (presumed) CF389_RS03215 SM00062 Bacterial periplasmic substrate-binding proteins CF389_RS03215 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CF389_RS03225 SM00382 ATPases associated with a variety of cellular activities CF389_RS03270 SM01350 CF389_RS03270 CF389_RS03315 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CF389_RS03325 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CF389_RS03350 SM00822 CF389_RS03350 CF389_RS03350 SM00823 Phosphopantetheine attachment site CF389_RS03350 SM00825 Beta-ketoacyl synthase CF389_RS03350 SM00826 CF389_RS03350 CF389_RS03350 SM01294 CF389_RS03350 CF389_RS03355 SM00822 CF389_RS03355 CF389_RS03355 SM00823 Phosphopantetheine attachment site CF389_RS03355 SM00825 Beta-ketoacyl synthase CF389_RS03355 SM01294 CF389_RS03355 CF389_RS03360 SM00822 CF389_RS03360 CF389_RS03360 SM00823 Phosphopantetheine attachment site CF389_RS03360 SM00825 Beta-ketoacyl synthase CF389_RS03360 SM00826 CF389_RS03360 CF389_RS03360 SM01294 CF389_RS03360 CF389_RS03365 SM00822 CF389_RS03365 CF389_RS03365 SM00823 Phosphopantetheine attachment site CF389_RS03365 SM00825 Beta-ketoacyl synthase CF389_RS03365 SM00826 CF389_RS03365 CF389_RS03365 SM01294 CF389_RS03365 CF389_RS03370 SM00822 CF389_RS03370 CF389_RS03370 SM00823 Phosphopantetheine attachment site CF389_RS03370 SM00825 Beta-ketoacyl synthase CF389_RS03370 SM01294 CF389_RS03370 CF389_RS03375 SM00822 CF389_RS03375 CF389_RS03375 SM00825 Beta-ketoacyl synthase CF389_RS03375 SM00826 CF389_RS03375 CF389_RS03380 SM00823 Phosphopantetheine attachment site CF389_RS03380 SM00825 Beta-ketoacyl synthase CF389_RS03380 SM00829 Enoylreductase CF389_RS03380 SM01294 CF389_RS03380 CF389_RS03405 SM00849 Metallo-beta-lactamase superfamily CF389_RS03510 SM00530 Helix-turn-helix XRE-family like proteins CF389_RS03515 SM00870 CF389_RS03515 CF389_RS03530 SM00919 Malic enzyme, NAD binding domain CF389_RS03530 SM01274 CF389_RS03530 CF389_RS03575 SM00936 Penicillin-binding protein 5, C-terminal domain CF389_RS03585 SM00387 Histidine kinase-like ATPases CF389_RS03730 SM00363 S4 RNA-binding domain CF389_RS03750 SM00448 cheY-homologous receiver domain CF389_RS03750 SM00862 Transcriptional regulatory protein, C terminal CF389_RS03755 SM00091 PAS domain CF389_RS03755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CF389_RS03755 SM00387 Histidine kinase-like ATPases CF389_RS03755 SM00388 His Kinase A (phosphoacceptor) domain CF389_RS03790 SM00487 DEAD-like helicases superfamily CF389_RS03790 SM00490 helicase superfamily c-terminal domain CF389_RS03800 SM00257 Lysin motif CF389_RS03820 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CF389_RS03860 SM00316 Ribosomal protein S1-like RNA-binding domain CF389_RS03905 SM00411 bacterial (prokaryotic) histone like domain CF389_RS03935 SM00562 CF389_RS03935 CF389_RS03940 SM00138 Methyltransferase, chemotaxis proteins CF389_RS04005 SM00028 Tetratricopeptide repeats CF389_RS04010 SM00914 CF389_RS04010 CF389_RS04045 SM00835 Cupin CF389_RS04065 SM00851 MGS-like domain CF389_RS04105 SM00479 CF389_RS04105 CF389_RS04105 SM00487 DEAD-like helicases superfamily CF389_RS04105 SM00491 CF389_RS04105 CF389_RS04135 SM00478 endonuclease III CF389_RS04135 SM00525 CF389_RS04135 CF389_RS04145 SM00060 Fibronectin type 3 domain CF389_RS04195 SM00487 DEAD-like helicases superfamily CF389_RS04195 SM00490 helicase superfamily c-terminal domain CF389_RS04225 SM00981 CF389_RS04225 CF389_RS04245 SM00491 CF389_RS04245 CF389_RS04325 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CF389_RS04325 SM00475 5'-3' exonuclease CF389_RS04365 SM00357 Cold shock protein domain CF389_RS04385 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CF389_RS04390 SM00567 E-Z type HEAT repeats CF389_RS04390 SM00932 Scaffold protein Nfu/NifU N terminal CF389_RS04465 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS04520 SM00871 Bacterial transcription activator, effector binding domain CF389_RS04530 SM00882 Coenzyme A transferase CF389_RS04535 SM00882 Coenzyme A transferase CF389_RS04585 SM00014 Acid phosphatase homologues CF389_RS04620 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CF389_RS04620 SM00245 tail specific protease CF389_RS04625 SM00345 helix_turn_helix gluconate operon transcriptional repressor CF389_RS04625 SM00866 CF389_RS04625 CF389_RS04730 SM00257 Lysin motif CF389_RS04740 SM00382 ATPases associated with a variety of cellular activities CF389_RS04745 SM00327 von Willebrand factor (vWF) type A domain CF389_RS04750 SM00861 Transketolase, pyrimidine binding domain CF389_RS04760 SM00849 Metallo-beta-lactamase superfamily CF389_RS04845 SM00341 Helicase and RNase D C-terminal CF389_RS04845 SM00487 DEAD-like helicases superfamily CF389_RS04845 SM00490 helicase superfamily c-terminal domain CF389_RS04845 SM00956 CF389_RS04845 CF389_RS04850 SM00257 Lysin motif CF389_RS04885 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CF389_RS04895 SM00849 Metallo-beta-lactamase superfamily CF389_RS04905 SM00342 helix_turn_helix, arabinose operon control protein CF389_RS04920 SM00822 CF389_RS04920 CF389_RS04935 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS04945 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CF389_RS04975 SM00822 CF389_RS04975 CF389_RS04990 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CF389_RS05030 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CF389_RS05085 SM00823 Phosphopantetheine attachment site CF389_RS05090 SM00823 Phosphopantetheine attachment site CF389_RS05095 SM00823 Phosphopantetheine attachment site CF389_RS05100 SM00823 Phosphopantetheine attachment site CF389_RS05105 SM00824 Thioesterase CF389_RS05130 SM00878 Biotin carboxylase C-terminal domain CF389_RS05190 SM00729 Elongator protein 3, MiaB family, Radical SAM CF389_RS05190 SM00876 Biotin and Thiamin Synthesis associated domain CF389_RS05205 SM00882 Coenzyme A transferase CF389_RS05210 SM00882 Coenzyme A transferase CF389_RS05215 SM00822 CF389_RS05215 CF389_RS05225 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CF389_RS05230 SM00823 Phosphopantetheine attachment site CF389_RS05230 SM00825 Beta-ketoacyl synthase CF389_RS05235 SM00823 Phosphopantetheine attachment site CF389_RS05240 SM00823 Phosphopantetheine attachment site CF389_RS05240 SM00824 Thioesterase CF389_RS05245 SM00606 Cellulose Binding Domain Type IV CF389_RS05255 SM00448 cheY-homologous receiver domain CF389_RS05255 SM00862 Transcriptional regulatory protein, C terminal CF389_RS05260 SM00387 Histidine kinase-like ATPases CF389_RS05260 SM00388 His Kinase A (phosphoacceptor) domain CF389_RS05270 SM01067 Cellulose binding domain CF389_RS05300 SM00354 helix_turn _helix lactose operon repressor CF389_RS05320 SM00829 Enoylreductase CF389_RS05340 SM00434 DNA Topoisomerase IV CF389_RS05345 SM00387 Histidine kinase-like ATPases CF389_RS05345 SM00433 TopoisomeraseII CF389_RS05350 SM00881 CoA binding domain CF389_RS05355 SM01207 CF389_RS05355 CF389_RS05425 SM00448 cheY-homologous receiver domain CF389_RS05450 SM00861 Transketolase, pyrimidine binding domain CF389_RS05460 SM00857 Resolvase, N terminal domain CF389_RS05465 SM00257 Lysin motif CF389_RS05505 SM00710 Parallel beta-helix repeats CF389_RS05565 SM00829 Enoylreductase CF389_RS05625 SM01230 CF389_RS05625 CF389_RS05630 SM00422 helix_turn_helix, mercury resistance CF389_RS05645 SM00382 ATPases associated with a variety of cellular activities CF389_RS05655 SM00646 CF389_RS05655 CF389_RS05760 SM00823 Phosphopantetheine attachment site CF389_RS05760 SM00825 Beta-ketoacyl synthase CF389_RS05760 SM01294 CF389_RS05760 CF389_RS05765 SM00822 CF389_RS05765 CF389_RS05765 SM00823 Phosphopantetheine attachment site CF389_RS05765 SM00825 Beta-ketoacyl synthase CF389_RS05765 SM00826 CF389_RS05765 CF389_RS05765 SM01294 CF389_RS05765 CF389_RS05770 SM00822 CF389_RS05770 CF389_RS05770 SM00823 Phosphopantetheine attachment site CF389_RS05770 SM00825 Beta-ketoacyl synthase CF389_RS05770 SM00826 CF389_RS05770 CF389_RS05770 SM01294 CF389_RS05770 CF389_RS05775 SM00822 CF389_RS05775 CF389_RS05775 SM00823 Phosphopantetheine attachment site CF389_RS05775 SM00825 Beta-ketoacyl synthase CF389_RS05775 SM00826 CF389_RS05775 CF389_RS05775 SM01294 CF389_RS05775 CF389_RS05780 SM00822 CF389_RS05780 CF389_RS05780 SM00823 Phosphopantetheine attachment site CF389_RS05780 SM00825 Beta-ketoacyl synthase CF389_RS05780 SM00826 CF389_RS05780 CF389_RS05780 SM01294 CF389_RS05780 CF389_RS05805 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CF389_RS05810 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CF389_RS05815 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CF389_RS05820 SM00849 Metallo-beta-lactamase superfamily CF389_RS05835 SM00853 MutL C terminal dimerisation domain CF389_RS05835 SM01340 CF389_RS05835 CF389_RS05840 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CF389_RS05840 SM00534 ATPase domain of DNA mismatch repair MUTS family CF389_RS05855 SM00729 Elongator protein 3, MiaB family, Radical SAM CF389_RS05865 SM00829 Enoylreductase CF389_RS05880 SM00322 K homology RNA-binding domain CF389_RS05880 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CF389_RS05890 SM00382 ATPases associated with a variety of cellular activities CF389_RS05895 SM00852 Probable molybdopterin binding domain CF389_RS05905 SM00530 Helix-turn-helix XRE-family like proteins CF389_RS05940 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS05950 SM00345 helix_turn_helix gluconate operon transcriptional repressor CF389_RS05950 SM00866 CF389_RS05950 CF389_RS05955 SM00382 ATPases associated with a variety of cellular activities CF389_RS05955 SM00843 CF389_RS05955 CF389_RS05970 SM00849 Metallo-beta-lactamase superfamily CF389_RS05975 SM01130 CF389_RS05975 CF389_RS05985 SM00859 Semialdehyde dehydrogenase, NAD binding domain CF389_RS06015 SM00316 Ribosomal protein S1-like RNA-binding domain CF389_RS06015 SM00322 K homology RNA-binding domain CF389_RS06020 SM01387 CF389_RS06020 CF389_RS06025 SM00904 Riboflavin kinase CF389_RS06060 SM00316 Ribosomal protein S1-like RNA-binding domain CF389_RS06060 SM00322 K homology RNA-binding domain CF389_RS06070 SM00479 CF389_RS06070 CF389_RS06070 SM00481 DNA polymerase alpha chain like domain CF389_RS06080 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CF389_RS06140 SM00260 Two component signalling adaptor domain CF389_RS06145 SM00073 Histidine Phosphotransfer domain CF389_RS06145 SM00260 Two component signalling adaptor domain CF389_RS06145 SM00387 Histidine kinase-like ATPases CF389_RS06145 SM01231 CF389_RS06145 CF389_RS06150 SM00448 cheY-homologous receiver domain CF389_RS06160 SM00962 SRP54-type protein, GTPase domain CF389_RS06195 SM00448 cheY-homologous receiver domain CF389_RS06245 SM00382 ATPases associated with a variety of cellular activities CF389_RS06285 SM00382 ATPases associated with a variety of cellular activities CF389_RS06285 SM01086 C-terminal, D2-small domain, of ClpB protein CF389_RS06305 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CF389_RS06305 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CF389_RS06305 SM00493 CF389_RS06305 CF389_RS06315 SM00881 CoA binding domain CF389_RS06375 SM00382 ATPases associated with a variety of cellular activities CF389_RS06375 SM00962 SRP54-type protein, GTPase domain CF389_RS06375 SM00963 SRP54-type protein, helical bundle domain CF389_RS06390 SM00382 ATPases associated with a variety of cellular activities CF389_RS06390 SM00962 SRP54-type protein, GTPase domain CF389_RS06390 SM00963 SRP54-type protein, helical bundle domain CF389_RS06395 SM00968 SMC proteins Flexible Hinge Domain CF389_RS06400 SM00358 Double-stranded RNA binding motif CF389_RS06400 SM00535 Ribonuclease III family CF389_RS06410 SM00822 CF389_RS06410 CF389_RS06415 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CF389_RS06430 SM00487 DEAD-like helicases superfamily CF389_RS06430 SM00490 helicase superfamily c-terminal domain CF389_RS06445 SM01120 CF389_RS06445 CF389_RS06445 SM01121 CF389_RS06445 CF389_RS06465 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CF389_RS06480 SM00220 Serine/Threonine protein kinases, catalytic domain CF389_RS06480 SM00740 CF389_RS06480 CF389_RS06485 SM00331 Sigma factor PP2C-like phosphatases CF389_RS06485 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CF389_RS06510 SM00487 DEAD-like helicases superfamily CF389_RS06510 SM00490 helicase superfamily c-terminal domain CF389_RS06520 SM01409 CF389_RS06520 CF389_RS06525 SM00072 Guanylate kinase homologues. CF389_RS06540 SM00831 Cation transporter/ATPase, N-terminus CF389_RS06595 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CF389_RS06610 SM00851 MGS-like domain CF389_RS06610 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CF389_RS06615 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CF389_RS06640 SM00363 S4 RNA-binding domain CF389_RS06670 SM00363 S4 RNA-binding domain CF389_RS06705 SM00382 ATPases associated with a variety of cellular activities CF389_RS06730 SM00864 Tubulin/FtsZ family, GTPase domain CF389_RS06730 SM00865 Tubulin/FtsZ family, C-terminal domain CF389_RS06735 SM00842 Cell division protein FtsA CF389_RS06775 SM00740 CF389_RS06775 CF389_RS06780 SM00740 CF389_RS06780 CF389_RS06890 SM00116 Domain in cystathionine beta-synthase and other proteins. CF389_RS06935 SM00878 Biotin carboxylase C-terminal domain CF389_RS06960 SM00670 Large family of predicted nucleotide-binding domains CF389_RS06980 SM00838 Elongation factor G C-terminus CF389_RS07075 SM00861 Transketolase, pyrimidine binding domain CF389_RS07090 SM00822 CF389_RS07090 CF389_RS07090 SM00823 Phosphopantetheine attachment site CF389_RS07090 SM01294 CF389_RS07090 CF389_RS07095 SM00822 CF389_RS07095 CF389_RS07095 SM00823 Phosphopantetheine attachment site CF389_RS07095 SM00825 Beta-ketoacyl synthase CF389_RS07095 SM01294 CF389_RS07095 CF389_RS07100 SM00822 CF389_RS07100 CF389_RS07100 SM00823 Phosphopantetheine attachment site CF389_RS07100 SM00825 Beta-ketoacyl synthase CF389_RS07100 SM01294 CF389_RS07100 CF389_RS07105 SM00822 CF389_RS07105 CF389_RS07105 SM00823 Phosphopantetheine attachment site CF389_RS07105 SM00825 Beta-ketoacyl synthase CF389_RS07105 SM01294 CF389_RS07105 CF389_RS07110 SM00822 CF389_RS07110 CF389_RS07110 SM00823 Phosphopantetheine attachment site CF389_RS07110 SM00825 Beta-ketoacyl synthase CF389_RS07110 SM01294 CF389_RS07110 CF389_RS07115 SM00822 CF389_RS07115 CF389_RS07115 SM00823 Phosphopantetheine attachment site CF389_RS07115 SM00825 Beta-ketoacyl synthase CF389_RS07115 SM00826 CF389_RS07115 CF389_RS07120 SM00822 CF389_RS07120 CF389_RS07120 SM00823 Phosphopantetheine attachment site CF389_RS07120 SM00825 Beta-ketoacyl synthase CF389_RS07120 SM00826 CF389_RS07120 CF389_RS07120 SM01294 CF389_RS07120 CF389_RS07125 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CF389_RS07165 SM00849 Metallo-beta-lactamase superfamily CF389_RS07185 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CF389_RS07185 SM00091 PAS domain CF389_RS07185 SM00387 Histidine kinase-like ATPases CF389_RS07185 SM00388 His Kinase A (phosphoacceptor) domain CF389_RS07190 SM00966 SpoVT / AbrB like domain CF389_RS07220 SM00382 ATPases associated with a variety of cellular activities CF389_RS07245 SM00420 helix_turn_helix, Deoxyribose operon repressor CF389_RS07245 SM01134 CF389_RS07245 CF389_RS07250 SM01066 Carbohydrate binding domain CF389_RS07255 SM00382 ATPases associated with a variety of cellular activities CF389_RS07285 SM00852 Probable molybdopterin binding domain CF389_RS07375 SM00052 Putative diguanylate phosphodiesterase CF389_RS07400 SM00257 Lysin motif CF389_RS07415 SM00260 Two component signalling adaptor domain CF389_RS07415 SM00448 cheY-homologous receiver domain CF389_RS07435 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CF389_RS07435 SM00091 PAS domain CF389_RS07435 SM00387 Histidine kinase-like ATPases CF389_RS07435 SM00388 His Kinase A (phosphoacceptor) domain CF389_RS07465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CF389_RS07465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CF389_RS07495 SM01061 CAT RNA binding domain CF389_RS07500 SM00354 helix_turn _helix lactose operon repressor CF389_RS07580 SM00382 ATPases associated with a variety of cellular activities CF389_RS07580 SM01086 C-terminal, D2-small domain, of ClpB protein CF389_RS07595 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS07600 SM00387 Histidine kinase-like ATPases CF389_RS07600 SM00388 His Kinase A (phosphoacceptor) domain CF389_RS07615 SM01007 Class II Aldolase and Adducin N-terminal domain CF389_RS07655 SM00091 PAS domain CF389_RS07655 SM00387 Histidine kinase-like ATPases CF389_RS07655 SM00388 His Kinase A (phosphoacceptor) domain CF389_RS07720 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen CF389_RS07735 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS07750 SM00422 helix_turn_helix, mercury resistance CF389_RS07755 SM00116 Domain in cystathionine beta-synthase and other proteins. CF389_RS07755 SM00924 MgtE intracellular N domain CF389_RS07775 SM00257 Lysin motif CF389_RS07775 SM00636 CF389_RS07775 CF389_RS07785 SM00382 ATPases associated with a variety of cellular activities CF389_RS07810 SM00100 Cyclic nucleotide-monophosphate binding domain CF389_RS07825 SM00028 Tetratricopeptide repeats CF389_RS07845 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS07860 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CF389_RS07900 SM00382 ATPases associated with a variety of cellular activities CF389_RS07910 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CF389_RS07925 SM00382 ATPases associated with a variety of cellular activities CF389_RS07950 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CF389_RS07995 SM00257 Lysin motif CF389_RS07995 SM00644 CF389_RS07995 CF389_RS08060 SM00257 Lysin motif CF389_RS08160 SM00382 ATPases associated with a variety of cellular activities CF389_RS08175 SM00530 Helix-turn-helix XRE-family like proteins CF389_RS08195 SM00257 Lysin motif CF389_RS08195 SM00644 CF389_RS08195 CF389_RS08205 SM00028 Tetratricopeptide repeats CF389_RS08220 SM01260 CF389_RS08220 CF389_RS08225 SM00382 ATPases associated with a variety of cellular activities CF389_RS08230 SM01260 CF389_RS08230 CF389_RS08240 SM00421 helix_turn_helix, Lux Regulon CF389_RS08240 SM00448 cheY-homologous receiver domain CF389_RS08260 SM00382 ATPases associated with a variety of cellular activities CF389_RS08265 SM00387 Histidine kinase-like ATPases CF389_RS08265 SM00388 His Kinase A (phosphoacceptor) domain CF389_RS08270 SM00448 cheY-homologous receiver domain CF389_RS08270 SM00862 Transcriptional regulatory protein, C terminal CF389_RS08275 SM00858 CF389_RS08275 CF389_RS08285 SM00354 helix_turn _helix lactose operon repressor CF389_RS08320 SM00382 ATPases associated with a variety of cellular activities CF389_RS08355 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CF389_RS08355 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CF389_RS08395 SM00420 helix_turn_helix, Deoxyribose operon repressor CF389_RS08395 SM01134 CF389_RS08395 CF389_RS08435 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS08505 SM00966 SpoVT / AbrB like domain CF389_RS08510 SM00382 ATPases associated with a variety of cellular activities CF389_RS08520 SM00849 Metallo-beta-lactamase superfamily CF389_RS08650 SM00954 Region found in RelA / SpoT proteins CF389_RS08660 SM01118 CF389_RS08660 CF389_RS08720 SM00382 ATPases associated with a variety of cellular activities CF389_RS08725 SM00382 ATPases associated with a variety of cellular activities CF389_RS08770 SM00382 ATPases associated with a variety of cellular activities CF389_RS08775 SM00382 ATPases associated with a variety of cellular activities CF389_RS08785 SM00825 Beta-ketoacyl synthase CF389_RS08840 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CF389_RS08845 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CF389_RS08865 SM00859 Semialdehyde dehydrogenase, NAD binding domain CF389_RS08925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CF389_RS08925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CF389_RS08935 SM00316 Ribosomal protein S1-like RNA-binding domain CF389_RS08975 SM00354 helix_turn _helix lactose operon repressor CF389_RS08980 SM00342 helix_turn_helix, arabinose operon control protein CF389_RS09105 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS09145 SM00894 Excalibur calcium-binding domain CF389_RS09170 SM00914 CF389_RS09170 CF389_RS09185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CF389_RS09205 SM00855 Phosphoglycerate mutase family CF389_RS09250 SM00849 Metallo-beta-lactamase superfamily CF389_RS09335 SM00382 ATPases associated with a variety of cellular activities CF389_RS09365 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS09410 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CF389_RS09430 SM00382 ATPases associated with a variety of cellular activities CF389_RS09465 SM00729 Elongator protein 3, MiaB family, Radical SAM CF389_RS09525 SM00382 ATPases associated with a variety of cellular activities CF389_RS09530 SM00382 ATPases associated with a variety of cellular activities CF389_RS09590 SM01091 Transporter associated domain CF389_RS09595 SM00825 Beta-ketoacyl synthase CF389_RS09605 SM00422 helix_turn_helix, mercury resistance CF389_RS09610 SM01091 Transporter associated domain CF389_RS09615 SM00563 Phosphate acyltransferases CF389_RS09660 SM00257 Lysin motif CF389_RS09665 SM00098 Alkaline phosphatase homologues CF389_RS09685 SM00257 Lysin motif CF389_RS09705 SM00421 helix_turn_helix, Lux Regulon CF389_RS09755 SM00116 Domain in cystathionine beta-synthase and other proteins. CF389_RS09765 SM00363 S4 RNA-binding domain CF389_RS09805 SM00267 diguanylate cyclase CF389_RS09820 SM00357 Cold shock protein domain CF389_RS09830 SM00382 ATPases associated with a variety of cellular activities CF389_RS09835 SM00382 ATPases associated with a variety of cellular activities CF389_RS09840 SM00345 helix_turn_helix gluconate operon transcriptional repressor CF389_RS09870 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS09885 SM00763 PrkA AAA domain CF389_RS09915 SM00567 E-Z type HEAT repeats CF389_RS09930 SM00530 Helix-turn-helix XRE-family like proteins CF389_RS09955 SM00062 Bacterial periplasmic substrate-binding proteins CF389_RS09960 SM00382 ATPases associated with a variety of cellular activities CF389_RS09975 SM01060 CF389_RS09975 CF389_RS09980 SM00382 ATPases associated with a variety of cellular activities CF389_RS09985 SM00382 ATPases associated with a variety of cellular activities CF389_RS10155 SM00382 ATPases associated with a variety of cellular activities CF389_RS10185 SM00478 endonuclease III CF389_RS10185 SM00525 CF389_RS10185 CF389_RS10215 SM00287 Bacterial SH3 domain homologues CF389_RS10285 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS10345 SM00382 ATPases associated with a variety of cellular activities CF389_RS10350 SM00382 ATPases associated with a variety of cellular activities CF389_RS10375 SM00382 ATPases associated with a variety of cellular activities CF389_RS10390 SM00861 Transketolase, pyrimidine binding domain CF389_RS10420 SM00478 endonuclease III CF389_RS10485 SM00226 Low molecular weight phosphatase family CF389_RS10510 SM00354 helix_turn _helix lactose operon repressor CF389_RS10540 SM00345 helix_turn_helix gluconate operon transcriptional repressor CF389_RS10540 SM00866 CF389_RS10540 CF389_RS10545 SM00642 Alpha-amylase domain CF389_RS10625 SM00849 Metallo-beta-lactamase superfamily CF389_RS10640 SM00448 cheY-homologous receiver domain CF389_RS10645 SM00091 PAS domain CF389_RS10645 SM00387 Histidine kinase-like ATPases CF389_RS10660 SM00448 cheY-homologous receiver domain CF389_RS10660 SM00862 Transcriptional regulatory protein, C terminal CF389_RS10665 SM00387 Histidine kinase-like ATPases CF389_RS10665 SM00388 His Kinase A (phosphoacceptor) domain CF389_RS10665 SM00448 cheY-homologous receiver domain CF389_RS10690 SM00656 CF389_RS10690 CF389_RS10705 SM00829 Enoylreductase CF389_RS10715 SM00487 DEAD-like helicases superfamily CF389_RS10715 SM00490 helicase superfamily c-terminal domain CF389_RS10720 SM00382 ATPases associated with a variety of cellular activities CF389_RS10730 SM00422 helix_turn_helix, mercury resistance CF389_RS10735 SM00382 ATPases associated with a variety of cellular activities CF389_RS10750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CF389_RS10815 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS10930 SM00382 ATPases associated with a variety of cellular activities CF389_RS10935 SM00382 ATPases associated with a variety of cellular activities CF389_RS10945 SM00046 Diacylglycerol kinase catalytic domain (presumed) CF389_RS10960 SM00845 GatB domain CF389_RS10995 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CF389_RS10995 SM00292 breast cancer carboxy-terminal domain CF389_RS10995 SM00532 Ligase N family CF389_RS11040 SM01209 CF389_RS11040 CF389_RS11040 SM01210 CF389_RS11040 CF389_RS11045 SM00798 AICARFT/IMPCHase bienzyme CF389_RS11045 SM00851 MGS-like domain CF389_RS11070 SM01211 CF389_RS11070 CF389_RS11085 SM00998 Adenylosuccinate lyase C-terminus CF389_RS11095 SM01001 AIR carboxylase CF389_RS11140 SM00460 Transglutaminase/protease-like homologues CF389_RS11180 SM00829 Enoylreductase CF389_RS11235 SM00829 Enoylreductase CF389_RS11240 SM00028 Tetratricopeptide repeats CF389_RS11240 SM00382 ATPases associated with a variety of cellular activities CF389_RS11265 SM00883 Chaperonin 10 Kd subunit CF389_RS11290 SM00881 CoA binding domain CF389_RS11300 SM00382 ATPases associated with a variety of cellular activities CF389_RS11370 SM00829 Enoylreductase CF389_RS11410 SM00345 helix_turn_helix gluconate operon transcriptional repressor CF389_RS11410 SM00895 CF389_RS11410 CF389_RS11415 SM00345 helix_turn_helix gluconate operon transcriptional repressor CF389_RS11415 SM00866 CF389_RS11415 CF389_RS11450 SM00345 helix_turn_helix gluconate operon transcriptional repressor CF389_RS11450 SM00895 CF389_RS11450 CF389_RS11475 SM00422 helix_turn_helix, mercury resistance CF389_RS11490 SM00530 Helix-turn-helix XRE-family like proteins CF389_RS11495 SM00825 Beta-ketoacyl synthase CF389_RS11520 SM00382 ATPases associated with a variety of cellular activities CF389_RS11535 SM00421 helix_turn_helix, Lux Regulon CF389_RS11535 SM00448 cheY-homologous receiver domain CF389_RS11540 SM00387 Histidine kinase-like ATPases CF389_RS11590 SM00345 helix_turn_helix gluconate operon transcriptional repressor CF389_RS11600 SM00422 helix_turn_helix, mercury resistance CF389_RS11605 SM00829 Enoylreductase CF389_RS11630 SM01130 CF389_RS11630 CF389_RS11690 SM00345 helix_turn_helix gluconate operon transcriptional repressor CF389_RS11700 SM00342 helix_turn_helix, arabinose operon control protein CF389_RS11720 SM00345 helix_turn_helix gluconate operon transcriptional repressor CF389_RS11720 SM00895 CF389_RS11720 CF389_RS11765 SM00450 Rhodanese Homology Domain CF389_RS11765 SM00849 Metallo-beta-lactamase superfamily CF389_RS11770 SM00450 Rhodanese Homology Domain CF389_RS11775 SM00450 Rhodanese Homology Domain CF389_RS11795 SM00357 Cold shock protein domain CF389_RS11835 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS11910 SM00731 SprT homologues. CF389_RS11920 SM00316 Ribosomal protein S1-like RNA-binding domain CF389_RS11920 SM00732 Likely ribonuclease with RNase H fold. CF389_RS11925 SM00331 Sigma factor PP2C-like phosphatases CF389_RS11925 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CF389_RS11945 SM00331 Sigma factor PP2C-like phosphatases CF389_RS11950 SM00387 Histidine kinase-like ATPases CF389_RS11975 SM01005 Alanine racemase, C-terminal domain CF389_RS12005 SM00487 DEAD-like helicases superfamily CF389_RS12005 SM00490 helicase superfamily c-terminal domain CF389_RS12055 SM00382 ATPases associated with a variety of cellular activities CF389_RS12070 SM00448 cheY-homologous receiver domain CF389_RS12075 SM00091 PAS domain CF389_RS12075 SM00387 Histidine kinase-like ATPases CF389_RS12195 SM00267 diguanylate cyclase CF389_RS12205 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CF389_RS12205 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CF389_RS12205 SM00493 CF389_RS12205 CF389_RS12210 SM00344 helix_turn_helix ASNC type CF389_RS12280 SM00346 helix_turn_helix isocitrate lyase regulation CF389_RS12285 SM00797 Allophanate hydrolase subunit 2 CF389_RS12290 SM00796 Allophanate hydrolase subunit 1 CF389_RS12345 SM00420 helix_turn_helix, Deoxyribose operon repressor CF389_RS12380 SM00345 helix_turn_helix gluconate operon transcriptional repressor CF389_RS12385 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CF389_RS12415 SM00382 ATPases associated with a variety of cellular activities CF389_RS12450 SM00028 Tetratricopeptide repeats CF389_RS12455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CF389_RS12455 SM00387 Histidine kinase-like ATPases CF389_RS12455 SM00388 His Kinase A (phosphoacceptor) domain CF389_RS12460 SM00448 cheY-homologous receiver domain CF389_RS12460 SM00862 Transcriptional regulatory protein, C terminal CF389_RS12470 SM00382 ATPases associated with a variety of cellular activities CF389_RS12485 SM00382 ATPases associated with a variety of cellular activities CF389_RS12495 SM00062 Bacterial periplasmic substrate-binding proteins CF389_RS12530 SM00710 Parallel beta-helix repeats CF389_RS12530 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses CF389_RS12565 SM00062 Bacterial periplasmic substrate-binding proteins CF389_RS12575 SM00382 ATPases associated with a variety of cellular activities CF389_RS12600 SM00823 Phosphopantetheine attachment site CF389_RS12605 SM00823 Phosphopantetheine attachment site CF389_RS12605 SM01294 CF389_RS12605 CF389_RS12610 SM00823 Phosphopantetheine attachment site CF389_RS12610 SM01294 CF389_RS12610 CF389_RS12620 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CF389_RS12660 SM00833 Cobalamin synthesis protein cobW C-terminal domain CF389_RS12765 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS12780 SM00632 CF389_RS12780 CF389_RS12780 SM00642 Alpha-amylase domain CF389_RS12810 SM00116 Domain in cystathionine beta-synthase and other proteins. CF389_RS12810 SM00382 ATPases associated with a variety of cellular activities CF389_RS12860 SM00382 ATPases associated with a variety of cellular activities CF389_RS12870 SM00642 Alpha-amylase domain CF389_RS12880 SM00028 Tetratricopeptide repeats CF389_RS12920 SM00870 CF389_RS12920 CF389_RS13020 SM00448 cheY-homologous receiver domain CF389_RS13025 SM00387 Histidine kinase-like ATPases CF389_RS13060 SM00450 Rhodanese Homology Domain CF389_RS13095 SM00530 Helix-turn-helix XRE-family like proteins CF389_RS13180 SM00382 ATPases associated with a variety of cellular activities CF389_RS13185 SM00421 helix_turn_helix, Lux Regulon CF389_RS13185 SM00448 cheY-homologous receiver domain CF389_RS13205 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS13340 SM00342 helix_turn_helix, arabinose operon control protein CF389_RS13375 SM00829 Enoylreductase CF389_RS13455 SM01251 CF389_RS13455 CF389_RS13470 SM00646 CF389_RS13470 CF389_RS13510 SM00382 ATPases associated with a variety of cellular activities CF389_RS13515 SM00382 ATPases associated with a variety of cellular activities CF389_RS13525 SM00662 RNA polymerases D CF389_RS13545 SM00316 Ribosomal protein S1-like RNA-binding domain CF389_RS13610 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CF389_RS13615 SM01374 CF389_RS13615 CF389_RS13635 SM00322 K homology RNA-binding domain CF389_RS13650 SM01382 CF389_RS13650 CF389_RS13650 SM01383 CF389_RS13650 CF389_RS13670 SM01403 CF389_RS13670 CF389_RS13685 SM00838 Elongation factor G C-terminus CF389_RS13685 SM00889 Elongation factor G, domain IV CF389_RS13705 SM00663 RNA polymerase I subunit A N-terminus CF389_RS13735 SM00649 Ribosomal protein L11/L12 CF389_RS13740 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CF389_RS13740 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CF389_RS13765 SM00967 RNA 2'-O ribose methyltransferase substrate binding CF389_RS13770 SM00535 Ribonuclease III family CF389_RS13775 SM00840 CF389_RS13775 CF389_RS13805 SM00670 Large family of predicted nucleotide-binding domains CF389_RS13815 SM00382 ATPases associated with a variety of cellular activities CF389_RS13820 SM00382 ATPases associated with a variety of cellular activities CF389_RS13820 SM01086 C-terminal, D2-small domain, of ClpB protein CF389_RS13925 SM00530 Helix-turn-helix XRE-family like proteins CF389_RS13935 SM00905 Dihydroneopterin aldolase CF389_RS13980 SM00382 ATPases associated with a variety of cellular activities CF389_RS13990 SM00977 TilS substrate C-terminal domain CF389_RS13995 SM00220 Serine/Threonine protein kinases, catalytic domain CF389_RS14005 SM00331 Sigma factor PP2C-like phosphatases CF389_RS14005 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CF389_RS14020 SM00316 Ribosomal protein S1-like RNA-binding domain CF389_RS14040 SM00363 S4 RNA-binding domain CF389_RS14055 SM00966 SpoVT / AbrB like domain CF389_RS14060 SM00487 DEAD-like helicases superfamily CF389_RS14060 SM00490 helicase superfamily c-terminal domain CF389_RS14060 SM00982 CF389_RS14060 CF389_RS14060 SM01058 CarD-like/TRCF domain CF389_RS14080 SM01400 CF389_RS14080 CF389_RS14125 SM00650 Ribosomal RNA adenine dimethylases CF389_RS14130 SM00493 CF389_RS14130 CF389_RS14135 SM01208 CF389_RS14135 CF389_RS14150 SM00966 SpoVT / AbrB like domain CF389_RS14160 SM00465 GIY-YIG type nucleases (URI domain) CF389_RS14255 SM00493 CF389_RS14255 CF389_RS14265 SM00382 ATPases associated with a variety of cellular activities CF389_RS14285 SM00257 Lysin motif CF389_RS14285 SM00636 CF389_RS14285 CF389_RS14325 SM00936 Penicillin-binding protein 5, C-terminal domain CF389_RS14330 SM00116 Domain in cystathionine beta-synthase and other proteins. CF389_RS14330 SM01240 CF389_RS14330 CF389_RS14365 SM00434 DNA Topoisomerase IV CF389_RS14370 SM00387 Histidine kinase-like ATPases CF389_RS14370 SM00433 TopoisomeraseII CF389_RS14390 SM00480 DNA polymerase III beta subunit CF389_RS14395 SM00382 ATPases associated with a variety of cellular activities CF389_RS14395 SM00760 Bacterial dnaA protein helix-turn-helix domain CF389_RS14415 SM00393 Putative single-stranded nucleic acids-binding domain CF389_RS14415 SM01245 CF389_RS14415 CF389_RS14425 SM01228 CF389_RS14425 CF389_RS14435 SM00470 ParB-like nuclease domain CF389_RS14445 SM00470 ParB-like nuclease domain CF389_RS14470 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CF389_RS14495 SM00342 helix_turn_helix, arabinose operon control protein CF389_RS14510 SM00354 helix_turn _helix lactose operon repressor CF389_RS14560 SM00345 helix_turn_helix gluconate operon transcriptional repressor CF389_RS14600 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS14610 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS14635 SM00345 helix_turn_helix gluconate operon transcriptional repressor CF389_RS14635 SM00895 CF389_RS14635 CF389_RS14640 SM00640 Glycosyl hydrolases family 32 CF389_RS14655 SM01131 CF389_RS14655 CF389_RS14680 SM00267 diguanylate cyclase CF389_RS14740 SM00382 ATPases associated with a variety of cellular activities CF389_RS14750 SM00788 Adenylosuccinate synthetase CF389_RS14780 SM00448 cheY-homologous receiver domain CF389_RS14780 SM00862 Transcriptional regulatory protein, C terminal CF389_RS14785 SM00091 PAS domain CF389_RS14785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CF389_RS14785 SM00387 Histidine kinase-like ATPases CF389_RS14785 SM00388 His Kinase A (phosphoacceptor) domain CF389_RS14800 SM00849 Metallo-beta-lactamase superfamily CF389_RS14805 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CF389_RS14815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CF389_RS14815 SM00387 Histidine kinase-like ATPases CF389_RS14815 SM00388 His Kinase A (phosphoacceptor) domain CF389_RS14835 SM00382 ATPases associated with a variety of cellular activities CF389_RS14840 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CF389_RS14845 SM00382 ATPases associated with a variety of cellular activities CF389_RS14865 SM00028 Tetratricopeptide repeats CF389_RS14950 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CF389_RS14955 SM01092 CO dehydrogenase flavoprotein C-terminal domain CF389_RS15000 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CF389_RS15010 SM00564 beta-propeller repeat CF389_RS15040 SM00421 helix_turn_helix, Lux Regulon CF389_RS15040 SM00448 cheY-homologous receiver domain CF389_RS15050 SM00387 Histidine kinase-like ATPases CF389_RS15065 SM00420 helix_turn_helix, Deoxyribose operon repressor CF389_RS15065 SM01134 CF389_RS15065 CF389_RS15120 SM00448 cheY-homologous receiver domain CF389_RS15120 SM00862 Transcriptional regulatory protein, C terminal CF389_RS15125 SM00387 Histidine kinase-like ATPases CF389_RS15130 SM00382 ATPases associated with a variety of cellular activities CF389_RS15185 SM01133 CF389_RS15185 CF389_RS15195 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CF389_RS15240 SM00487 DEAD-like helicases superfamily CF389_RS15240 SM00490 helicase superfamily c-terminal domain CF389_RS15255 SM00656 CF389_RS15255 CF389_RS15325 SM00487 DEAD-like helicases superfamily CF389_RS15325 SM00490 helicase superfamily c-terminal domain CF389_RS15350 SM01060 CF389_RS15350 CF389_RS15410 SM00382 ATPases associated with a variety of cellular activities CF389_RS15435 SM00382 ATPases associated with a variety of cellular activities CF389_RS15440 SM00382 ATPases associated with a variety of cellular activities CF389_RS15460 SM01060 CF389_RS15460 CF389_RS15505 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CF389_RS15600 SM00954 Region found in RelA / SpoT proteins CF389_RS15625 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CF389_RS15630 SM00422 helix_turn_helix, mercury resistance CF389_RS15780 SM01061 CAT RNA binding domain CF389_RS15790 SM00640 Glycosyl hydrolases family 32 CF389_RS15825 SM00986 Uracil DNA glycosylase superfamily CF389_RS15825 SM00987 UreE urease accessory protein, C-terminal domain CF389_RS15870 SM00858 CF389_RS15870 CF389_RS15910 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CF389_RS16025 SM00382 ATPases associated with a variety of cellular activities CF389_RS16050 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CF389_RS16070 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS16110 SM00421 helix_turn_helix, Lux Regulon CF389_RS16140 SM00530 Helix-turn-helix XRE-family like proteins CF389_RS16150 SM00028 Tetratricopeptide repeats CF389_RS16160 SM00836 DALR anticodon binding domain CF389_RS16160 SM01016 Arginyl tRNA synthetase N terminal dom CF389_RS16170 SM00100 Cyclic nucleotide-monophosphate binding domain CF389_RS16170 SM00419 helix_turn_helix, cAMP Regulatory protein CF389_RS16185 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CF389_RS16210 SM00155 Phospholipase D. Active site motifs. CF389_RS16215 SM00382 ATPases associated with a variety of cellular activities CF389_RS16230 SM00155 Phospholipase D. Active site motifs. CF389_RS16255 SM00448 cheY-homologous receiver domain CF389_RS16280 SM00357 Cold shock protein domain CF389_RS16280 SM00382 ATPases associated with a variety of cellular activities CF389_RS16280 SM00959 Rho termination factor, N-terminal domain CF389_RS16295 SM00919 Malic enzyme, NAD binding domain CF389_RS16295 SM01274 CF389_RS16295 CF389_RS16315 SM00937 CF389_RS16315 CF389_RS16355 SM00226 Low molecular weight phosphatase family CF389_RS16415 SM00382 ATPases associated with a variety of cellular activities CF389_RS16450 SM00327 von Willebrand factor (vWF) type A domain CF389_RS16455 SM00327 von Willebrand factor (vWF) type A domain CF389_RS16470 SM00729 Elongator protein 3, MiaB family, Radical SAM CF389_RS16475 SM00028 Tetratricopeptide repeats CF389_RS16525 SM00155 Phospholipase D. Active site motifs. CF389_RS16555 SM00014 Acid phosphatase homologues CF389_RS16565 SM00938 Nitrogen regulatory protein P-II CF389_RS16595 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS16620 SM00028 Tetratricopeptide repeats CF389_RS16650 SM00420 helix_turn_helix, Deoxyribose operon repressor CF389_RS16650 SM01134 CF389_RS16650 CF389_RS16660 SM00487 DEAD-like helicases superfamily CF389_RS16660 SM00490 helicase superfamily c-terminal domain CF389_RS16695 SM00984 UDP binding domain CF389_RS16795 SM00344 helix_turn_helix ASNC type CF389_RS16810 SM00903 Flavin reductase like domain CF389_RS16860 SM00287 Bacterial SH3 domain homologues CF389_RS16875 SM00382 ATPases associated with a variety of cellular activities CF389_RS16890 SM00354 helix_turn _helix lactose operon repressor CF389_RS16925 SM00854 Bacterial capsule synthesis protein PGA_cap CF389_RS16985 SM00047 Lysozyme subfamily 2 CF389_RS16985 SM00287 Bacterial SH3 domain homologues CF389_RS17020 SM00382 ATPases associated with a variety of cellular activities CF389_RS17050 SM00646 CF389_RS17050 CF389_RS17070 SM00984 UDP binding domain CF389_RS17110 SM00387 Histidine kinase-like ATPases CF389_RS17115 SM00421 helix_turn_helix, Lux Regulon CF389_RS17115 SM00448 cheY-homologous receiver domain CF389_RS17125 SM00487 DEAD-like helicases superfamily CF389_RS17125 SM00490 helicase superfamily c-terminal domain CF389_RS17210 SM00957 SecA DEAD-like domain CF389_RS17210 SM00958 SecA preprotein cross-linking domain CF389_RS17230 SM00382 ATPases associated with a variety of cellular activities CF389_RS17240 SM00710 Parallel beta-helix repeats CF389_RS17245 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CF389_RS17245 SM00245 tail specific protease CF389_RS17255 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CF389_RS17305 SM00487 DEAD-like helicases superfamily CF389_RS17305 SM00490 helicase superfamily c-terminal domain CF389_RS17310 SM00382 ATPases associated with a variety of cellular activities CF389_RS17350 SM00345 helix_turn_helix gluconate operon transcriptional repressor CF389_RS17350 SM00866 CF389_RS17350 CF389_RS17430 SM00382 ATPases associated with a variety of cellular activities CF389_RS17440 SM00448 cheY-homologous receiver domain CF389_RS17440 SM00862 Transcriptional regulatory protein, C terminal CF389_RS17445 SM00387 Histidine kinase-like ATPases CF389_RS17445 SM00388 His Kinase A (phosphoacceptor) domain CF389_RS17450 SM00028 Tetratricopeptide repeats CF389_RS17510 SM00947 Carbonic anhydrase CF389_RS17550 SM00354 helix_turn _helix lactose operon repressor CF389_RS17560 SM00640 Glycosyl hydrolases family 32 CF389_RS17640 SM00530 Helix-turn-helix XRE-family like proteins CF389_RS17735 SM00345 helix_turn_helix gluconate operon transcriptional repressor CF389_RS17735 SM00895 CF389_RS17735 CF389_RS17800 SM00345 helix_turn_helix gluconate operon transcriptional repressor CF389_RS17815 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CF389_RS17840 SM01192 CF389_RS17840 CF389_RS17840 SM01193 CF389_RS17840 CF389_RS17850 SM00984 UDP binding domain CF389_RS17920 SM00116 Domain in cystathionine beta-synthase and other proteins. CF389_RS17920 SM00382 ATPases associated with a variety of cellular activities CF389_RS17945 SM00116 Domain in cystathionine beta-synthase and other proteins. CF389_RS17945 SM00382 ATPases associated with a variety of cellular activities CF389_RS17965 SM00382 ATPases associated with a variety of cellular activities CF389_RS17980 SM00448 cheY-homologous receiver domain CF389_RS17980 SM00862 Transcriptional regulatory protein, C terminal CF389_RS17985 SM00387 Histidine kinase-like ATPases CF389_RS17985 SM00388 His Kinase A (phosphoacceptor) domain CF389_RS17995 SM00530 Helix-turn-helix XRE-family like proteins CF389_RS18000 SM00530 Helix-turn-helix XRE-family like proteins CF389_RS18005 SM00530 Helix-turn-helix XRE-family like proteins CF389_RS18020 SM00316 Ribosomal protein S1-like RNA-binding domain CF389_RS18020 SM00357 Cold shock protein domain CF389_RS18020 SM00955 CF389_RS18020 CF389_RS18065 SM00062 Bacterial periplasmic substrate-binding proteins CF389_RS18070 SM00062 Bacterial periplasmic substrate-binding proteins CF389_RS18085 SM00382 ATPases associated with a variety of cellular activities CF389_RS18200 SM00382 ATPases associated with a variety of cellular activities CF389_RS18210 SM00421 helix_turn_helix, Lux Regulon CF389_RS18210 SM00448 cheY-homologous receiver domain CF389_RS18275 SM00382 ATPases associated with a variety of cellular activities CF389_RS18285 SM00835 Cupin CF389_RS18305 SM00448 cheY-homologous receiver domain CF389_RS18305 SM00862 Transcriptional regulatory protein, C terminal CF389_RS18310 SM00387 Histidine kinase-like ATPases CF389_RS18310 SM00388 His Kinase A (phosphoacceptor) domain CF389_RS18335 SM00382 ATPases associated with a variety of cellular activities CF389_RS18370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CF389_RS18370 SM00387 Histidine kinase-like ATPases CF389_RS18375 SM00421 helix_turn_helix, Lux Regulon CF389_RS18375 SM00448 cheY-homologous receiver domain CF389_RS18415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CF389_RS18415 SM00387 Histidine kinase-like ATPases CF389_RS18415 SM00388 His Kinase A (phosphoacceptor) domain CF389_RS18420 SM00448 cheY-homologous receiver domain CF389_RS18420 SM00862 Transcriptional regulatory protein, C terminal CF389_RS18425 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CF389_RS18450 SM00382 ATPases associated with a variety of cellular activities CF389_RS18480 SM00347 helix_turn_helix multiple antibiotic resistance protein CF389_RS18535 SM00493 CF389_RS18535 CF389_RS18550 SM00382 ATPases associated with a variety of cellular activities CF389_RS18550 SM00930 CF389_RS18550 CF389_RS18575 SM00382 ATPases associated with a variety of cellular activities CF389_RS18620 SM00465 GIY-YIG type nucleases (URI domain) CF389_RS18635 SM00422 helix_turn_helix, mercury resistance CF389_RS18665 SM00345 helix_turn_helix gluconate operon transcriptional repressor CF389_RS18665 SM00866 CF389_RS18665 CF389_RS18670 SM00382 ATPases associated with a variety of cellular activities CF389_RS18740 SM00729 Elongator protein 3, MiaB family, Radical SAM CF389_RS18835 SM00422 helix_turn_helix, mercury resistance CF389_RS18855 SM00382 ATPases associated with a variety of cellular activities CF389_RS18870 SM01240 CF389_RS18870 CF389_RS18930 SM00822 CF389_RS18930 CF389_RS18950 SM00823 Phosphopantetheine attachment site CF389_RS18950 SM00824 Thioesterase CF389_RS18955 SM00923 MbtH-like protein CF389_RS18965 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CF389_RS18965 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CF389_RS19010 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CF389_RS19050 SM00052 Putative diguanylate phosphodiesterase CF389_RS19075 SM00387 Histidine kinase-like ATPases CF389_RS19080 SM00421 helix_turn_helix, Lux Regulon CF389_RS19080 SM00448 cheY-homologous receiver domain CF389_RS19140 SM00382 ATPases associated with a variety of cellular activities CF389_RS19160 SM00028 Tetratricopeptide repeats CF389_RS19210 SM00028 Tetratricopeptide repeats