locus-tag	class	description
CHN56_RS00005	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CHN56_RS00010	COG1525	nuclease
CHN56_RS00015	COG4282	regulation of fungal-type cell wall biogenesis
CHN56_RS00025	COG5444	nuclease activity
CHN56_RS00060	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CHN56_RS00065	COG0457	Tetratricopeptide repeat
CHN56_RS00090	COG5632	N-Acetylmuramoyl-L-alanine amidase
CHN56_RS00090	COG3409	Peptidoglycan-binding domain 1 protein
CHN56_RS00095	COG5434	Belongs to the glycosyl hydrolase 28 family
CHN56_RS00115	COG0741	lytic transglycosylase activity
CHN56_RS00115	COG0739	heme binding
CHN56_RS00115	COG1196	nuclear chromosome segregation
CHN56_RS00135	COG0582	viral genome integration into host DNA
CHN56_RS00250	COG0776	regulation of translation
CHN56_RS00375	COG3655	Transcriptional regulator
CHN56_RS00480	COG3655	Transcriptional regulator
CHN56_RS00560	COG0756	dUTP diphosphatase activity
CHN56_RS00575	COG5484	DNA packaging
CHN56_RS00575	COG3728	DNA packaging
CHN56_RS00585	COG1793	dna ligase
CHN56_RS00590	COG2135	peptidase activity
CHN56_RS00615	COG4195	phage-related replication protein
CHN56_RS00620	COG3420	alginic acid biosynthetic process
CHN56_RS00620	COG5434	Belongs to the glycosyl hydrolase 28 family
CHN56_RS00675	COG3584	3D domain protein
CHN56_RS00690	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CHN56_RS00695	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
CHN56_RS00710	COG0270	DNA (cytosine-5-)-methyltransferase activity
CHN56_RS00765	COG1780	Probably involved in ribonucleotide reductase function
CHN56_RS00770	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CHN56_RS00795	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CHN56_RS00800	COG4112	unkown
CHN56_RS00835	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CHN56_RS00870	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CHN56_RS00930	COG3331	DNA recombination
CHN56_RS00935	COG2337	Toxic component of a toxin-antitoxin (TA) module
CHN56_RS00975	COG0671	phosphoesterase, PA-phosphatase related
CHN56_RS00995	COG1876	peptidase activity
CHN56_RS01005	COG2226	methyltransferase
CHN56_RS01010	COG3409	Peptidoglycan-binding domain 1 protein
CHN56_RS01010	COG0793	Belongs to the peptidase S41A family
CHN56_RS01015	COG2188	Transcriptional regulator
CHN56_RS01020	COG2723	6-phospho-beta-galactosidase activity
CHN56_RS01030	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CHN56_RS01040	COG0346	lactoylglutathione lyase activity
CHN56_RS01045	COG0400	carboxylic ester hydrolase activity
CHN56_RS01050	COG0778	Nitroreductase
CHN56_RS01055	COG1733	regulation of RNA biosynthetic process
CHN56_RS01065	COG1942	4-Oxalocrotonate Tautomerase
CHN56_RS01080	COG2962	Rard protein
CHN56_RS01090	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CHN56_RS01095	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CHN56_RS01100	COG1366	Belongs to the anti-sigma-factor antagonist family
CHN56_RS01105	COG0534	Mate efflux family protein
CHN56_RS01110	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CHN56_RS01115	COG1819	glycosyl
CHN56_RS01120	COG0791	NLP P60 protein
CHN56_RS01120	COG1388	LysM domain
CHN56_RS01125	COG2032	superoxide dismutase activity
CHN56_RS01130	COG0714	Associated with various cellular activities
CHN56_RS01135	COG4548	von Willebrand factor, type A
CHN56_RS01145	COG0508	dehydrogenase complex catalyzes the overall conversion of
CHN56_RS01150	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CHN56_RS01155	COG0385	Bile acid
CHN56_RS01160	COG0733	neurotransmitter:sodium symporter activity
CHN56_RS01165	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CHN56_RS01170	COG1657	PFAM Prenyltransferase squalene oxidase
CHN56_RS01175	COG1012	belongs to the aldehyde dehydrogenase family
CHN56_RS01205	COG0071	Belongs to the small heat shock protein (HSP20) family
CHN56_RS01220	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CHN56_RS01225	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CHN56_RS01235	COG0514	ATP-dependent DNA helicase (RecQ)
CHN56_RS01240	COG1388	LysM domain
CHN56_RS01240	COG3584	3D domain protein
CHN56_RS01250	COG1619	proteins homologs of microcin C7 resistance protein MccF
CHN56_RS01265	COG2322	membrane
CHN56_RS01270	COG0741	lytic transglycosylase activity
CHN56_RS01275	COG0640	Transcriptional regulator
CHN56_RS01285	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CHN56_RS01290	COG1309	transcriptional regulator
CHN56_RS01295	COG2207	Transcriptional regulator
CHN56_RS01295	COG0662	Cupin 2, conserved barrel domain protein
CHN56_RS01300	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CHN56_RS01305	COG1733	regulation of RNA biosynthetic process
CHN56_RS01310	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS01330	COG0243	molybdopterin cofactor binding
CHN56_RS01335	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CHN56_RS01340	COG1070	Carbohydrate kinase
CHN56_RS01345	COG2814	Major facilitator Superfamily
CHN56_RS01355	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
CHN56_RS01360	COG0300	oxidoreductase activity
CHN56_RS01375	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CHN56_RS01380	COG0583	DNA-binding transcription factor activity
CHN56_RS01385	COG0069	glutamate synthase activity
CHN56_RS01385	COG0070	glutamate synthase
CHN56_RS01385	COG0067	glutamate synthase
CHN56_RS01390	COG0493	'glutamate synthase
CHN56_RS01395	COG0604	alcohol dehydrogenase
CHN56_RS01405	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CHN56_RS01410	COG0640	Transcriptional regulator
CHN56_RS01415	COG2814	Major facilitator Superfamily
CHN56_RS01420	COG0405	Gamma-glutamyltransferase
CHN56_RS01425	COG0166	Belongs to the GPI family
CHN56_RS01430	COG0582	viral genome integration into host DNA
CHN56_RS01445	COG0534	Mate efflux family protein
CHN56_RS01450	COG2017	converts alpha-aldose to the beta-anomer
CHN56_RS01455	COG2027	D-alanyl-D-alanine carboxypeptidase
CHN56_RS01465	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS01470	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS01475	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS01480	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS01485	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
CHN56_RS01485	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS01495	COG1649	PFAM Uncharacterised BCR, COG1649
CHN56_RS01500	COG1960	acyl-CoA dehydrogenase activity
CHN56_RS01505	COG0318	PFAM AMP-dependent synthetase and ligase
CHN56_RS01510	COG0439	Biotin carboxylase
CHN56_RS01515	COG0511	ligase activity, forming carbon-carbon bonds
CHN56_RS01520	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CHN56_RS01525	COG1024	Enoyl-CoA hydratase
CHN56_RS01530	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CHN56_RS01535	COG0586	Pfam SNARE associated Golgi protein
CHN56_RS01540	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CHN56_RS01545	COG2246	polysaccharide biosynthetic process
CHN56_RS01555	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CHN56_RS01575	COG2124	cytochrome p450
CHN56_RS01580	COG2610	gluconate transmembrane transporter activity
CHN56_RS01585	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CHN56_RS01590	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CHN56_RS01595	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS01620	COG3507	Belongs to the glycosyl hydrolase 43 family
CHN56_RS01680	COG2271	Major facilitator Superfamily
CHN56_RS01685	COG1609	Transcriptional regulator
CHN56_RS01690	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS01695	COG1312	Catalyzes the dehydration of D-mannonate
CHN56_RS01700	COG0800	Aldolase
CHN56_RS01705	COG1063	alcohol dehydrogenase
CHN56_RS01715	COG1115	amino acid carrier protein
CHN56_RS01725	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CHN56_RS01730	COG0187	DNA topoisomerase II activity
CHN56_RS01735	COG1832	CoA-binding protein
CHN56_RS01745	COG4841	protein insertion into membrane
CHN56_RS01755	COG0824	Thioesterase
CHN56_RS01775	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CHN56_RS01780	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CHN56_RS01795	COG0071	Belongs to the small heat shock protein (HSP20) family
CHN56_RS01805	COG4846	Membrane protein involved in cytochrome C biogenesis
CHN56_RS01810	COG2201	protein-glutamate methylesterase activity
CHN56_RS01815	COG0785	Cytochrome C biogenesis protein
CHN56_RS01835	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CHN56_RS01845	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CHN56_RS01875	COG4195	phage-related replication protein
CHN56_RS01880	COG0756	dUTP diphosphatase activity
CHN56_RS01885	COG5434	Belongs to the glycosyl hydrolase 28 family
CHN56_RS01900	COG3397	chitin binding
CHN56_RS01925	COG0456	acetyltransferase
CHN56_RS01935	COG1064	alcohol dehydrogenase
CHN56_RS01960	COG3848	Pyruvate phosphate dikinase
CHN56_RS01960	COG0574	Belongs to the PEP-utilizing enzyme family
CHN56_RS01965	COG1070	Carbohydrate kinase
CHN56_RS01980	COG3507	Belongs to the glycosyl hydrolase 43 family
CHN56_RS01985	COG2211	Major facilitator Superfamily
CHN56_RS02000	COG0174	glutamine synthetase
CHN56_RS02005	COG0789	Transcriptional regulator
CHN56_RS02010	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
CHN56_RS02015	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CHN56_RS02020	COG0464	growth
CHN56_RS02030	COG0860	N-Acetylmuramoyl-L-alanine amidase
CHN56_RS02035	COG4112	unkown
CHN56_RS02040	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CHN56_RS02045	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CHN56_RS02085	COG2076	Multidrug Resistance protein
CHN56_RS02095	COG1764	response to oxidative stress
CHN56_RS02100	COG4195	phage-related replication protein
CHN56_RS02110	COG1404	Belongs to the peptidase S8 family
CHN56_RS02120	COG3619	membrane
CHN56_RS02125	COG3209	COG3209 Rhs family protein
CHN56_RS02130	COG2124	cytochrome p450
CHN56_RS02135	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CHN56_RS02135	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CHN56_RS02135	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
CHN56_RS02135	COG3321	synthase
CHN56_RS02140	COG4221	oxidoreductase activity
CHN56_RS02140	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS02140	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS02140	COG3321	synthase
CHN56_RS02145	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS02145	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS02145	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CHN56_RS02145	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CHN56_RS02145	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS02145	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CHN56_RS02145	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS02145	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CHN56_RS02145	COG3321	synthase
CHN56_RS02145	COG3321	synthase
CHN56_RS02150	COG4221	oxidoreductase activity
CHN56_RS02150	COG0300	oxidoreductase activity
CHN56_RS02150	COG3321	synthase
CHN56_RS02150	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CHN56_RS02155	COG0318	PFAM AMP-dependent synthetase and ligase
CHN56_RS02155	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS02155	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS02155	COG0300	oxidoreductase activity
CHN56_RS02155	COG3321	synthase
CHN56_RS02160	COG1024	Enoyl-CoA hydratase
CHN56_RS02165	COG1024	Enoyl-CoA hydratase
CHN56_RS02170	COG3425	synthase
CHN56_RS02175	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CHN56_RS02225	COG4550	Control of competence regulator ComK, YlbF/YmcA
CHN56_RS02245	COG2359	stage V sporulation protein S
CHN56_RS02250	COG1692	metallophosphoesterase
CHN56_RS02260	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CHN56_RS02275	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CHN56_RS02280	COG1426	Protein conserved in bacteria
CHN56_RS02295	COG0300	oxidoreductase activity
CHN56_RS02300	COG0612	Peptidase, M16
CHN56_RS02305	COG0612	Peptidase, M16
CHN56_RS02310	COG1033	growth of symbiont in host cell
CHN56_RS02310	COG2409	Drug exporters of the RND superfamily
CHN56_RS02315	COG1846	Transcriptional regulator
CHN56_RS02320	COG2814	Major facilitator Superfamily
CHN56_RS02325	COG2188	Transcriptional regulator
CHN56_RS02330	COG4980	gas vesicle protein
CHN56_RS02330	COG1674	ftsk spoiiie
CHN56_RS02340	COG0740	serine-type endopeptidase activity
CHN56_RS02345	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CHN56_RS02355	COG0527	aspartate kinase activity
CHN56_RS02360	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CHN56_RS02365	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CHN56_RS02370	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CHN56_RS02375	COG1873	PFAM PRC-barrel domain
CHN56_RS02380	COG0612	Peptidase, M16
CHN56_RS02385	COG0726	polysaccharide deacetylase
CHN56_RS02400	COG0196	riboflavin kinase activity
CHN56_RS02415	COG1550	Protein conserved in bacteria
CHN56_RS02425	COG1358	cellular component organization or biogenesis
CHN56_RS02430	COG2740	Nucleic-acid-binding protein implicated in transcription termination
CHN56_RS02435	COG0195	Participates in both transcription termination and antitermination
CHN56_RS02445	COG2176	DNA-directed DNA polymerase activity
CHN56_RS02455	COG0750	zinc metalloprotease
CHN56_RS02465	COG4589	Belongs to the CDS family
CHN56_RS02470	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CHN56_RS02500	COG1191	sigma factor activity
CHN56_RS02510	COG1776	CheC inhibitor of MCP methylation
CHN56_RS02515	COG0835	chemotaxis
CHN56_RS02520	COG0643	Histidine kinase
CHN56_RS02520	COG2198	Histidine kinase
CHN56_RS02525	COG2201	protein-glutamate methylesterase activity
CHN56_RS02530	COG0455	bacterial-type flagellum organization
CHN56_RS02535	COG1419	protein localization to endoplasmic reticulum
CHN56_RS02540	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CHN56_RS02545	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CHN56_RS02550	COG1684	flagellar biosynthetic protein fliR
CHN56_RS02555	COG1987	bacterial-type flagellum assembly
CHN56_RS02560	COG1338	Plays a role in the flagellum-specific transport system
CHN56_RS02565	COG3190	flagellar
CHN56_RS02570	COG2201	protein-glutamate methylesterase activity
CHN56_RS02575	COG1776	CheC inhibitor of MCP methylation
CHN56_RS02575	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CHN56_RS02580	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CHN56_RS02585	COG1580	Controls the rotational direction of flagella during chemotaxis
CHN56_RS02590	COG1582	Flagellar protein (FlbD)
CHN56_RS02595	COG4786	Flagellar basal body rod
CHN56_RS02600	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CHN56_RS02605	COG3144	bacterial-type flagellum assembly
CHN56_RS02610	COG3334	PFAM MgtE intracellular
CHN56_RS02615	COG2882	bacterial-type flagellum organization
CHN56_RS02620	COG1157	protein secretion by the type III secretion system
CHN56_RS02625	COG1317	bacterial-type flagellum organization
CHN56_RS02630	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CHN56_RS02635	COG1766	The M ring may be actively involved in energy transduction
CHN56_RS02640	COG1677	Flagellar hook-basal body complex protein FliE
CHN56_RS02645	COG1558	bacterial-type flagellum-dependent cell motility
CHN56_RS02650	COG1815	bacterial-type flagellum-dependent cell motility
CHN56_RS02670	COG4974	Belongs to the 'phage' integrase family
CHN56_RS02680	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CHN56_RS02685	COG0758	DNA mediated transformation
CHN56_RS02690	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CHN56_RS02700	COG2257	FlhB HrpN YscU SpaS Family
CHN56_RS02715	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CHN56_RS02740	COG1837	Belongs to the UPF0109 family
CHN56_RS02750	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CHN56_RS02765	COG0552	protein localization to endoplasmic reticulum
CHN56_RS02770	COG1196	nuclear chromosome segregation
CHN56_RS02785	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS02790	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CHN56_RS02805	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CHN56_RS02810	COG1760	l-serine dehydratase
CHN56_RS02815	COG1760	l-serine dehydratase
CHN56_RS02820	COG1461	Dihydroxyacetone kinase
CHN56_RS02825	COG1302	Protein conserved in bacteria
CHN56_RS02840	COG1564	THIamine pyrophosphokinase
CHN56_RS02845	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CHN56_RS02855	COG0515	serine threonine protein kinase
CHN56_RS02855	COG2815	serine threonine protein kinase
CHN56_RS02860	COG0631	protein serine/threonine phosphatase activity
CHN56_RS02870	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CHN56_RS02870	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CHN56_RS02880	COG0242	peptide deformylase activity
CHN56_RS02885	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CHN56_RS02890	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CHN56_RS02900	COG0194	GDP metabolic process
CHN56_RS02910	COG1561	YicC-like family, N-terminal region
CHN56_RS02915	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CHN56_RS02930	COG1648	precorrin-2 dehydrogenase activity
CHN56_RS02935	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
CHN56_RS02940	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CHN56_RS02955	COG0306	phosphate transporter
CHN56_RS02965	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CHN56_RS02970	COG0284	orotidine-5'-phosphate decarboxylase activity
CHN56_RS02985	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CHN56_RS02990	COG0505	Belongs to the CarA family
CHN56_RS02995	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CHN56_RS03005	COG2233	PERMEase
CHN56_RS03015	COG0564	pseudouridine synthase activity
CHN56_RS03025	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CHN56_RS03030	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CHN56_RS03040	COG3599	regulation of cell shape
CHN56_RS03045	COG2302	S4 RNA-binding domain
CHN56_RS03050	COG0762	integral membrane protein
CHN56_RS03060	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CHN56_RS03065	COG1496	oxidoreductase activity
CHN56_RS03070	COG1873	PFAM PRC-barrel domain
CHN56_RS03075	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CHN56_RS03080	COG1119	ATPase activity
CHN56_RS03085	COG1191	sigma factor activity
CHN56_RS03090	COG1191	sigma factor activity
CHN56_RS03100	COG4412	M6 family metalloprotease domain protein
CHN56_RS03100	COG1404	Belongs to the peptidase S8 family
CHN56_RS03105	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CHN56_RS03110	COG0849	cell division
CHN56_RS03115	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CHN56_RS03130	COG0772	Belongs to the SEDS family
CHN56_RS03150	COG0768	penicillin binding
CHN56_RS03155	COG0768	penicillin binding
CHN56_RS03160	COG4839	cell division protein FtsL
CHN56_RS03180	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CHN56_RS03200	COG1399	metal-binding, possibly nucleic acid-binding protein
CHN56_RS03210	COG3480	Lon protease (S16) C-terminal proteolytic domain
CHN56_RS03215	COG1752	Esterase of the alpha-beta hydrolase superfamily
CHN56_RS03220	COG3314	Sporulation integral membrane protein YlbJ
CHN56_RS03230	COG0742	ribosomal rna small subunit methyltransferase
CHN56_RS03245	COG3679	Belongs to the UPF0342 family
CHN56_RS03260	COG2340	Cysteine-rich secretory protein family
CHN56_RS03265	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
CHN56_RS03275	COG3336	cytochrome c oxidase
CHN56_RS03280	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CHN56_RS03285	COG1845	cytochrome c oxidase, subunit III
CHN56_RS03290	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CHN56_RS03295	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CHN56_RS03295	COG2010	Cytochrome c
CHN56_RS03310	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
CHN56_RS03315	COG0772	Belongs to the SEDS family
CHN56_RS03325	COG2066	Belongs to the glutaminase family
CHN56_RS03330	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CHN56_RS03335	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CHN56_RS03345	COG4896	Protein conserved in bacteria
CHN56_RS03355	COG1217	gtp-binding protein TYPA
CHN56_RS03375	COG1595	DNA-templated transcription, initiation
CHN56_RS03390	COG3227	Zinc metalloprotease (Elastase)
CHN56_RS03400	COG0483	inositol monophosphate 1-phosphatase activity
CHN56_RS03425	COG1982	Orn Lys Arg decarboxylase major
CHN56_RS03440	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CHN56_RS03445	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CHN56_RS03450	COG0508	dehydrogenase complex catalyzes the overall conversion of
CHN56_RS03455	COG0022	dehydrogenase e1 component
CHN56_RS03460	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CHN56_RS03465	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CHN56_RS03470	COG4221	oxidoreductase activity
CHN56_RS03470	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS03470	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS03470	COG3321	synthase
CHN56_RS03475	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CHN56_RS03475	COG4221	oxidoreductase activity
CHN56_RS03475	COG0300	oxidoreductase activity
CHN56_RS03475	COG3321	synthase
CHN56_RS03480	COG0300	oxidoreductase activity
CHN56_RS03480	COG4221	oxidoreductase activity
CHN56_RS03480	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CHN56_RS03480	COG3321	synthase
CHN56_RS03485	COG3321	synthase
CHN56_RS03485	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CHN56_RS03485	COG4221	oxidoreductase activity
CHN56_RS03485	COG0300	oxidoreductase activity
CHN56_RS03490	COG3321	synthase
CHN56_RS03490	COG4221	oxidoreductase activity
CHN56_RS03490	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS03490	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS03495	COG4221	oxidoreductase activity
CHN56_RS03495	COG0300	oxidoreductase activity
CHN56_RS03495	COG3321	synthase
CHN56_RS03495	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CHN56_RS03500	COG4221	oxidoreductase activity
CHN56_RS03500	COG3321	synthase
CHN56_RS03500	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS03500	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS03515	COG0497	DNA recombination
CHN56_RS03525	COG0242	peptide deformylase activity
CHN56_RS03530	COG0561	phosphatase activity
CHN56_RS03545	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CHN56_RS03555	COG0569	domain protein
CHN56_RS03560	COG2105	PFAM AIG2 family protein
CHN56_RS03560	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
CHN56_RS03565	COG3852	Histidine kinase
CHN56_RS03570	COG2002	toxin-antitoxin pair type II binding
CHN56_RS03580	COG1077	Cell shape determining protein MreB Mrl
CHN56_RS03590	COG2309	aminopeptidase activity
CHN56_RS03595	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CHN56_RS03600	COG0488	(ABC) transporter
CHN56_RS03610	COG0681	Belongs to the peptidase S26 family
CHN56_RS03615	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CHN56_RS03615	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CHN56_RS03615	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CHN56_RS03620	COG1105	Belongs to the carbohydrate kinase PfkB family
CHN56_RS03625	COG1349	DNA-binding transcription factor activity
CHN56_RS03630	COG0577	efflux transmembrane transporter activity
CHN56_RS03635	COG1136	(ABC) transporter
CHN56_RS03640	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CHN56_RS03650	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CHN56_RS03655	COG0314	molybdopterin synthase activity
CHN56_RS03660	COG1763	Mo-molybdopterin cofactor biosynthetic process
CHN56_RS03665	COG0303	'Molybdopterin
CHN56_RS03670	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CHN56_RS03690	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CHN56_RS03695	COG0668	transmembrane transport
CHN56_RS03715	COG0716	FMN binding
CHN56_RS03725	COG0716	FMN binding
CHN56_RS03730	COG0583	DNA-binding transcription factor activity
CHN56_RS03735	COG0517	IMP dehydrogenase activity
CHN56_RS03745	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
CHN56_RS03750	COG4703	Protein of unknown function (DUF1797)
CHN56_RS03755	COG2200	EAL domain
CHN56_RS03765	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS03770	COG1408	metallophosphoesterase
CHN56_RS03775	COG1376	ErfK ybiS ycfS ynhG family protein
CHN56_RS03780	COG2814	Major facilitator Superfamily
CHN56_RS03790	COG0784	Response regulator, receiver
CHN56_RS03790	COG0835	chemotaxis
CHN56_RS03805	COG0436	Aminotransferase
CHN56_RS03810	COG4191	Histidine kinase
CHN56_RS03815	COG0768	penicillin binding
CHN56_RS03820	COG2340	Cysteine-rich secretory protein family
CHN56_RS03825	COG0347	Belongs to the P(II) protein family
CHN56_RS03835	COG2084	Dehydrogenase
CHN56_RS03840	COG0840	transmembrane signaling receptor activity
CHN56_RS03845	COG1533	DNA photolyase activity
CHN56_RS03855	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CHN56_RS03860	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CHN56_RS03865	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CHN56_RS03865	COG1263	PTS System
CHN56_RS03865	COG2190	(PTS) system
CHN56_RS03870	COG3711	transcriptional antiterminator
CHN56_RS03875	COG1609	Transcriptional regulator
CHN56_RS03880	COG0006	proline dipeptidase activity
CHN56_RS03885	COG2217	Heavy metal translocating P-type atpase
CHN56_RS03890	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CHN56_RS03895	COG2244	polysaccharide biosynthetic process
CHN56_RS03900	COG3773	Cell wall hydrolase
CHN56_RS03910	COG4873	Protein conserved in bacteria
CHN56_RS03960	COG0602	queuosine metabolic process
CHN56_RS03965	COG0720	synthase
CHN56_RS03980	COG3949	Membrane
CHN56_RS03990	COG0542	response to heat
CHN56_RS03995	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CHN56_RS04000	COG1360	Flagellar Motor Protein
CHN56_RS04005	COG1846	Transcriptional regulator
CHN56_RS04010	COG3852	Histidine kinase
CHN56_RS04040	COG0436	Aminotransferase
CHN56_RS04045	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CHN56_RS04060	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CHN56_RS04065	COG5002	protein histidine kinase activity
CHN56_RS04070	COG3594	Acyltransferase
CHN56_RS04080	COG2323	membrane
CHN56_RS04085	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CHN56_RS04115	COG1191	sigma factor activity
CHN56_RS04120	COG0861	Integral membrane protein TerC family
CHN56_RS04125	COG0586	Pfam SNARE associated Golgi protein
CHN56_RS04135	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
CHN56_RS04140	COG1793	dna ligase
CHN56_RS04140	COG3285	dna ligase
CHN56_RS04145	COG0726	polysaccharide deacetylase
CHN56_RS04150	COG1846	Transcriptional regulator
CHN56_RS04165	COG0789	Transcriptional regulator
CHN56_RS04170	COG2239	Acts as a magnesium transporter
CHN56_RS04185	COG3858	chitin binding
CHN56_RS04185	COG1388	LysM domain
CHN56_RS04190	COG4721	ABC-type cobalt transport system, permease component
CHN56_RS04195	COG1122	ATPase activity
CHN56_RS04200	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CHN56_RS04205	COG1366	Belongs to the anti-sigma-factor antagonist family
CHN56_RS04210	COG1404	Belongs to the peptidase S8 family
CHN56_RS04220	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CHN56_RS04235	COG0457	Tetratricopeptide repeat
CHN56_RS04235	COG0463	Glycosyl transferase, family 2
CHN56_RS04250	COG1764	response to oxidative stress
CHN56_RS04255	COG1846	Transcriptional regulator
CHN56_RS04260	COG1764	response to oxidative stress
CHN56_RS04270	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CHN56_RS04275	COG0788	formyltetrahydrofolate deformylase activity
CHN56_RS04280	COG2076	Multidrug Resistance protein
CHN56_RS04285	COG2076	Multidrug Resistance protein
CHN56_RS04290	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CHN56_RS04295	COG1607	acyl-coa hydrolase
CHN56_RS04300	COG1834	amidinotransferase
CHN56_RS04305	COG2706	6-phosphogluconolactonase activity
CHN56_RS04310	COG4608	Belongs to the ABC transporter superfamily
CHN56_RS04315	COG0791	NLP P60 protein
CHN56_RS04320	COG4948	Mandelate Racemase Muconate Lactonizing
CHN56_RS04325	COG1619	proteins homologs of microcin C7 resistance protein MccF
CHN56_RS04330	COG4166	transmembrane transport
CHN56_RS04335	COG0444	Belongs to the ABC transporter superfamily
CHN56_RS04340	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CHN56_RS04345	COG0601	transmembrane transport
CHN56_RS04350	COG2362	D-Aminopeptidase
CHN56_RS04355	COG0477	Major facilitator Superfamily
CHN56_RS04360	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CHN56_RS04365	COG0463	Glycosyl transferase, family 2
CHN56_RS04370	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CHN56_RS04375	COG0346	lactoylglutathione lyase activity
CHN56_RS04380	COG0531	amino acid
CHN56_RS04385	COG1392	Phosphate transport regulator
CHN56_RS04390	COG0306	phosphate transporter
CHN56_RS04405	COG3409	Peptidoglycan-binding domain 1 protein
CHN56_RS04405	COG5632	N-Acetylmuramoyl-L-alanine amidase
CHN56_RS04445	COG3778	Protein conserved in bacteria
CHN56_RS04450	COG3299	homolog of phage Mu protein gp47
CHN56_RS04455	COG3628	GPW Gp25 family protein
CHN56_RS04465	COG4193	domain, Protein
CHN56_RS04470	COG1652	LysM domain
CHN56_RS04475	COG3953	SLT domain
CHN56_RS04475	COG5412	phage tail tape measure protein
CHN56_RS04475	COG3953	SLT domain
CHN56_RS04475	COG5412	phage tail tape measure protein
CHN56_RS04475	COG5412	phage tail tape measure protein
CHN56_RS04475	COG3953	SLT domain
CHN56_RS04525	COG4653	Phage capsid family
CHN56_RS04530	COG0338	D12 class N6 adenine-specific DNA methyltransferase
CHN56_RS04535	COG5518	Phage portal protein
CHN56_RS04540	COG1783	phage Terminase large subunit
CHN56_RS04545	COG5484	DNA packaging
CHN56_RS04545	COG3728	DNA packaging
CHN56_RS04550	COG1595	DNA-templated transcription, initiation
CHN56_RS04570	COG1484	DNA-dependent DNA replication
CHN56_RS04575	COG1522	sequence-specific DNA binding
CHN56_RS04585	COG1396	sequence-specific DNA binding
CHN56_RS04590	COG2856	Zn peptidase
CHN56_RS04595	COG4195	phage-related replication protein
CHN56_RS04605	COG1388	LysM domain
CHN56_RS04605	COG5632	N-Acetylmuramoyl-L-alanine amidase
CHN56_RS04605	COG3409	Peptidoglycan-binding domain 1 protein
CHN56_RS04615	COG0457	Tetratricopeptide repeat
CHN56_RS04620	COG2318	DinB family
CHN56_RS04625	COG0730	response to heat
CHN56_RS04630	COG2721	sulfolactate sulfo-lyase activity
CHN56_RS04635	COG0246	Mannitol dehydrogenase
CHN56_RS04640	COG1609	Transcriptional regulator
CHN56_RS04645	COG2211	Major facilitator Superfamily
CHN56_RS04655	COG1252	NADH dehydrogenase
CHN56_RS04665	COG4297	protein containing double-stranded beta helix domain
CHN56_RS04670	COG0697	spore germination
CHN56_RS04675	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CHN56_RS04680	COG0390	transport system, permease component
CHN56_RS04685	COG1587	Uroporphyrinogen-III synthase
CHN56_RS04695	COG1819	glycosyl
CHN56_RS04700	COG2124	cytochrome p450
CHN56_RS04705	COG2427	Protein of unknown function (DUF1641)
CHN56_RS04710	COG3383	formate dehydrogenase (NAD+) activity
CHN56_RS04720	COG2205	protein histidine kinase activity
CHN56_RS04735	COG1285	pathogenesis
CHN56_RS04750	COG1349	DNA-binding transcription factor activity
CHN56_RS04760	COG1447	Phosphotransferase system cellobiose-specific component IIA
CHN56_RS04765	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CHN56_RS04765	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CHN56_RS04770	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CHN56_RS04775	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CHN56_RS04780	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
CHN56_RS04790	COG1846	Transcriptional regulator
CHN56_RS04800	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CHN56_RS04805	COG2367	Beta-lactamase
CHN56_RS04815	COG5444	nuclease activity
CHN56_RS04935	COG0582	viral genome integration into host DNA
CHN56_RS04955	COG0626	cystathionine gamma-synthase activity
CHN56_RS04960	COG0626	cystathionine gamma-synthase activity
CHN56_RS04965	COG2382	esterase
CHN56_RS04975	COG2153	protein acetylation
CHN56_RS04985	COG1131	(ABC) transporter
CHN56_RS05005	COG0210	DNA helicase
CHN56_RS05060	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CHN56_RS05065	COG0351	phosphomethylpyrimidine kinase
CHN56_RS05070	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CHN56_RS05080	COG2104	thiamine diphosphate biosynthetic process
CHN56_RS05085	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CHN56_RS05090	COG0352	thiamine-phosphate diphosphorylase activity
CHN56_RS05095	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CHN56_RS05100	COG0569	domain protein
CHN56_RS05100	COG0475	glutathione-regulated potassium exporter activity
CHN56_RS05110	COG0564	pseudouridine synthase activity
CHN56_RS05115	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CHN56_RS05120	COG2357	RelA SpoT domain protein
CHN56_RS05130	COG4116	CYTH
CHN56_RS05135	COG0741	lytic transglycosylase activity
CHN56_RS05140	COG2346	COG2346, Truncated hemoglobins
CHN56_RS05145	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CHN56_RS05155	COG1164	Oligoendopeptidase f
CHN56_RS05160	COG4469	Competence protein
CHN56_RS05165	COG4862	establishment of competence for transformation
CHN56_RS05170	COG0861	Integral membrane protein TerC family
CHN56_RS05175	COG1393	Belongs to the ArsC family
CHN56_RS05180	COG0456	acetyltransferase
CHN56_RS05190	COG4608	Belongs to the ABC transporter superfamily
CHN56_RS05195	COG0444	Belongs to the ABC transporter superfamily
CHN56_RS05200	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CHN56_RS05205	COG0601	transmembrane transport
CHN56_RS05210	COG4166	transmembrane transport
CHN56_RS05215	COG0180	Tryptophanyl-tRNA synthetase
CHN56_RS05225	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CHN56_RS05230	COG0601	transmembrane transport
CHN56_RS05240	COG4608	Belongs to the ABC transporter superfamily
CHN56_RS05245	COG0444	Belongs to the ABC transporter superfamily
CHN56_RS05250	COG5504	Zn-dependent protease
CHN56_RS05255	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CHN56_RS05260	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CHN56_RS05275	COG1744	ABC transporter substrate-binding protein PnrA-like
CHN56_RS05285	COG2267	carboxylic ester hydrolase activity
CHN56_RS05305	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CHN56_RS05310	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CHN56_RS05315	COG0505	Belongs to the CarA family
CHN56_RS05320	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CHN56_RS05330	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CHN56_RS05340	COG2271	Major facilitator Superfamily
CHN56_RS05345	COG0277	FAD linked oxidase domain protein
CHN56_RS05360	COG2151	metal-sulfur cluster biosynthetic enzyme
CHN56_RS05365	COG1073	alpha beta
CHN56_RS05370	COG0561	phosphatase activity
CHN56_RS05385	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CHN56_RS05390	COG1307	EDD domain protein, DegV family
CHN56_RS05400	COG0840	transmembrane signaling receptor activity
CHN56_RS05405	COG1744	ABC transporter substrate-binding protein PnrA-like
CHN56_RS05410	COG2996	Protein conserved in bacteria
CHN56_RS05420	COG0646	methionine synthase
CHN56_RS05420	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CHN56_RS05425	COG2153	protein acetylation
CHN56_RS05430	COG1357	PFAM Pentapeptide repeats (8 copies)
CHN56_RS05435	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CHN56_RS05440	COG1279	arginine transmembrane transporter activity
CHN56_RS05445	COG2318	DinB family
CHN56_RS05450	COG0673	inositol 2-dehydrogenase activity
CHN56_RS05455	COG1609	Transcriptional regulator
CHN56_RS05460	COG2207	Transcriptional regulator
CHN56_RS05460	COG1917	Cupin 2, conserved barrel domain protein
CHN56_RS05465	COG0534	Mate efflux family protein
CHN56_RS05470	COG1562	ergosterol biosynthetic process
CHN56_RS05475	COG0367	asparagine synthase
CHN56_RS05495	COG0179	Fumarylacetoacetate (FAA) hydrolase
CHN56_RS05535	COG1403	HNH endonuclease
CHN56_RS05540	COG0419	ATPase involved in DNA repair
CHN56_RS05545	COG0420	3'-5' exonuclease activity
CHN56_RS05560	COG2323	membrane
CHN56_RS05565	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
CHN56_RS05575	COG2814	Major facilitator Superfamily
CHN56_RS05580	COG3180	Ammonia monooxygenase
CHN56_RS05585	COG1846	Transcriptional regulator
CHN56_RS05590	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CHN56_RS05595	COG0681	Belongs to the peptidase S26 family
CHN56_RS05600	COG0398	Pfam SNARE associated Golgi protein
CHN56_RS05615	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CHN56_RS05635	COG5646	InterPro IPR014922
CHN56_RS05645	COG4903	ComK protein
CHN56_RS05655	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS05660	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CHN56_RS05660	COG0723	plastoquinol--plastocyanin reductase activity
CHN56_RS05665	COG0840	transmembrane signaling receptor activity
CHN56_RS05670	COG1268	BioY protein
CHN56_RS05675	COG0318	PFAM AMP-dependent synthetase and ligase
CHN56_RS05680	COG0183	Belongs to the thiolase family
CHN56_RS05685	COG0406	alpha-ribazole phosphatase activity
CHN56_RS05690	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CHN56_RS05700	COG1404	Belongs to the peptidase S8 family
CHN56_RS05705	COG0501	Belongs to the peptidase M48B family
CHN56_RS05715	COG0318	PFAM AMP-dependent synthetase and ligase
CHN56_RS05720	COG0702	epimerase
CHN56_RS05725	COG0095	Lipoate-protein ligase
CHN56_RS05730	COG1234	tRNA 3'-trailer cleavage
CHN56_RS05740	COG1301	dicarboxylic acid transport
CHN56_RS05745	COG1363	Peptidase, m42
CHN56_RS05755	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CHN56_RS05760	COG1511	domain protein
CHN56_RS05765	COG1309	transcriptional regulator
CHN56_RS05770	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CHN56_RS05775	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CHN56_RS05785	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CHN56_RS05790	COG2329	Antibiotic biosynthesis monooxygenase
CHN56_RS05795	COG3069	C4-dicarboxylate transmembrane transporter activity
CHN56_RS05800	COG1473	amidohydrolase
CHN56_RS05810	COG4473	ABC transporter
CHN56_RS05815	COG1131	(ABC) transporter
CHN56_RS05820	COG0537	adenosine 5'-monophosphoramidase activity
CHN56_RS05825	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CHN56_RS05840	COG4980	gas vesicle protein
CHN56_RS05880	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CHN56_RS05895	COG4717	serine-type aminopeptidase activity
CHN56_RS05900	COG0420	3'-5' exonuclease activity
CHN56_RS05905	COG1668	transmembrane transport
CHN56_RS05910	COG4152	abc transporter atp-binding protein
CHN56_RS05920	COG1024	Enoyl-CoA hydratase
CHN56_RS05930	COG0490	domain, Protein
CHN56_RS05935	COG0475	glutathione-regulated potassium exporter activity
CHN56_RS05945	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CHN56_RS05950	COG0561	phosphatase activity
CHN56_RS05955	COG4335	DNA alkylation repair
CHN56_RS05970	COG0189	ligase activity
CHN56_RS05975	COG0189	ligase activity
CHN56_RS06000	COG0702	epimerase
CHN56_RS06005	COG1132	(ABC) transporter
CHN56_RS06010	COG1132	(ABC) transporter
CHN56_RS06015	COG0589	response to stress
CHN56_RS06025	COG3226	Transcriptional regulator
CHN56_RS06030	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CHN56_RS06035	COG0726	polysaccharide deacetylase
CHN56_RS06040	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CHN56_RS06045	COG0668	transmembrane transport
CHN56_RS06055	COG0584	glycerophosphoryl diester phosphodiesterase
CHN56_RS06060	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CHN56_RS06065	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CHN56_RS06070	COG1253	flavin adenine dinucleotide binding
CHN56_RS06075	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CHN56_RS06080	COG0436	Aminotransferase
CHN56_RS06085	COG0789	Transcriptional regulator
CHN56_RS06090	COG1253	flavin adenine dinucleotide binding
CHN56_RS06095	COG0204	Acyl-transferase
CHN56_RS06100	COG1595	DNA-templated transcription, initiation
CHN56_RS06115	COG0733	neurotransmitter:sodium symporter activity
CHN56_RS06120	COG0531	amino acid
CHN56_RS06125	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS06130	COG0372	Belongs to the citrate synthase family
CHN56_RS06135	COG0583	DNA-binding transcription factor activity
CHN56_RS06140	COG0791	NLP P60 protein
CHN56_RS06140	COG1388	LysM domain
CHN56_RS06145	COG1785	Belongs to the alkaline phosphatase family
CHN56_RS06150	COG2719	SpoVR family
CHN56_RS06155	COG0668	transmembrane transport
CHN56_RS06160	COG1959	2 iron, 2 sulfur cluster binding
CHN56_RS06165	COG1388	LysM domain
CHN56_RS06165	COG0791	NLP P60 protein
CHN56_RS06180	COG0431	NADPH-dependent FMN reductase
CHN56_RS06185	COG2197	response regulator
CHN56_RS06190	COG2203	Gaf domain
CHN56_RS06190	COG4585	Histidine kinase
CHN56_RS06195	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CHN56_RS06200	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CHN56_RS06210	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CHN56_RS06215	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CHN56_RS06220	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CHN56_RS06225	COG3153	acetyltransferase
CHN56_RS06225	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CHN56_RS06230	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CHN56_RS06235	COG0517	IMP dehydrogenase activity
CHN56_RS06245	COG0564	pseudouridine synthase activity
CHN56_RS06250	COG3764	Sortase (surface protein transpeptidase)
CHN56_RS06255	COG0737	Belongs to the 5'-nucleotidase family
CHN56_RS06255	COG1525	nuclease
CHN56_RS06255	COG4085	toxin activity
CHN56_RS06260	COG5577	PFAM Coat F domain
CHN56_RS06280	COG1823	symporter activity
CHN56_RS06285	COG3706	GGDEF domain
CHN56_RS06290	COG1464	Belongs to the NlpA lipoprotein family
CHN56_RS06300	COG1278	Cold shock
CHN56_RS06305	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CHN56_RS06310	COG1131	(ABC) transporter
CHN56_RS06315	COG1131	(ABC) transporter
CHN56_RS06320	COG1725	Transcriptional regulator
CHN56_RS06335	COG0655	NAD(P)H dehydrogenase (quinone) activity
CHN56_RS06340	COG2814	Major facilitator Superfamily
CHN56_RS06345	COG1566	PFAM secretion protein HlyD family protein
CHN56_RS06350	COG1846	Transcriptional regulator
CHN56_RS06365	COG2766	serine protein kinase
CHN56_RS06375	COG1664	Polymer-forming cytoskeletal
CHN56_RS06380	COG1664	Polymer-forming cytoskeletal
CHN56_RS06385	COG0789	Transcriptional regulator
CHN56_RS06390	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CHN56_RS06400	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CHN56_RS06405	COG3382	B3 4 domain protein
CHN56_RS06415	COG1476	TRANSCRIPTIONal
CHN56_RS06435	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CHN56_RS06440	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CHN56_RS06445	COG1116	anion transmembrane transporter activity
CHN56_RS06460	COG0753	catalase activity
CHN56_RS06465	COG4608	Belongs to the ABC transporter superfamily
CHN56_RS06470	COG0444	Belongs to the ABC transporter superfamily
CHN56_RS06475	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CHN56_RS06480	COG0601	transmembrane transport
CHN56_RS06485	COG0747	negative chemotaxis
CHN56_RS06495	COG0277	FAD linked oxidase domain protein
CHN56_RS06505	COG3340	Belongs to the peptidase S51 family
CHN56_RS06620	COG0735	belongs to the Fur family
CHN56_RS06625	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CHN56_RS06635	COG4129	membrane
CHN56_RS06640	COG1132	(ABC) transporter
CHN56_RS06660	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS06670	COG1194	a g-specific adenine glycosylase
CHN56_RS06675	COG1988	membrane-bound metal-dependent
CHN56_RS06680	COG4485	Bacterial membrane protein, YfhO
CHN56_RS06685	COG0463	Glycosyl transferase, family 2
CHN56_RS06690	COG0596	Alpha beta hydrolase
CHN56_RS06695	COG5658	integral membrane protein
CHN56_RS06700	COG3103	Sh3 type 3 domain protein
CHN56_RS06715	COG3591	Belongs to the peptidase S1B family
CHN56_RS06725	COG2814	Major facilitator Superfamily
CHN56_RS06740	COG1090	epimerase
CHN56_RS06755	COG0778	Nitroreductase
CHN56_RS06760	COG0384	phenazine biosynthesis protein PhzF
CHN56_RS06765	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CHN56_RS06765	COG0392	lysyltransferase activity
CHN56_RS06770	COG1846	Transcriptional regulator
CHN56_RS06775	COG2814	Major facilitator Superfamily
CHN56_RS06780	COG2318	DinB family
CHN56_RS06785	COG2732	(Barnase) inhibitor
CHN56_RS06790	COG3848	Pyruvate phosphate dikinase
CHN56_RS06790	COG0574	Belongs to the PEP-utilizing enzyme family
CHN56_RS06795	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
CHN56_RS06800	COG2249	NAD(P)H dehydrogenase (quinone) activity
CHN56_RS06805	COG1695	Transcriptional regulator
CHN56_RS06820	COG2514	catechol 2,3-dioxygenase activity
CHN56_RS06825	COG2259	Doxx family
CHN56_RS06830	COG1132	(ABC) transporter
CHN56_RS06835	COG1132	(ABC) transporter
CHN56_RS06840	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CHN56_RS06840	COG1263	PTS System
CHN56_RS06845	COG1737	Transcriptional regulator
CHN56_RS06850	COG1486	melibiose metabolic process
CHN56_RS06860	COG3284	Transcriptional regulator
CHN56_RS06865	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CHN56_RS06870	COG0508	dehydrogenase complex catalyzes the overall conversion of
CHN56_RS06875	COG0022	dehydrogenase e1 component
CHN56_RS06880	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CHN56_RS06885	COG4637	Psort location Cytoplasmic, score
CHN56_RS06890	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CHN56_RS06900	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CHN56_RS06905	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CHN56_RS06910	COG0598	Magnesium transport protein CorA
CHN56_RS06920	COG2084	Dehydrogenase
CHN56_RS06925	COG0726	polysaccharide deacetylase
CHN56_RS06935	COG0535	radical SAM domain protein
CHN56_RS06940	COG0668	transmembrane transport
CHN56_RS06950	COG0387	Pfam Sodium calcium exchanger
CHN56_RS06955	COG0477	Major facilitator Superfamily
CHN56_RS06960	COG1295	ribonuclease BN
CHN56_RS06965	COG4980	gas vesicle protein
CHN56_RS06970	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CHN56_RS06995	COG1609	Transcriptional regulator
CHN56_RS07000	COG0693	protein deglycase activity
CHN56_RS07005	COG0737	Belongs to the 5'-nucleotidase family
CHN56_RS07020	COG0778	Nitroreductase
CHN56_RS07025	COG2188	Transcriptional regulator
CHN56_RS07030	COG0366	Alpha amylase catalytic
CHN56_RS07035	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CHN56_RS07035	COG1263	PTS System
CHN56_RS07050	COG0071	Belongs to the small heat shock protein (HSP20) family
CHN56_RS07060	COG1368	sulfuric ester hydrolase activity
CHN56_RS07070	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CHN56_RS07070	COG1263	PTS System
CHN56_RS07075	COG0024	Methionine aminopeptidase
CHN56_RS07095	COG2258	MOSC domain
CHN56_RS07105	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
CHN56_RS07110	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CHN56_RS07115	COG2851	Citrate transporter
CHN56_RS07120	COG3181	Tripartite tricarboxylate transporter family receptor
CHN56_RS07125	COG4565	transcriptional regulatory protein
CHN56_RS07130	COG3290	protein histidine kinase activity
CHN56_RS07150	COG0471	metal ion transport
CHN56_RS07155	COG3866	Pectate lyase
CHN56_RS07170	COG2130	NADP-dependent
CHN56_RS07175	COG0456	acetyltransferase
CHN56_RS07180	COG0513	Belongs to the DEAD box helicase family
CHN56_RS07185	COG0488	(ABC) transporter
CHN56_RS07190	COG2814	Major facilitator Superfamily
CHN56_RS07195	COG0789	Transcriptional regulator
CHN56_RS07200	COG0488	(ABC) transporter
CHN56_RS07205	COG0457	Tetratricopeptide repeat
CHN56_RS07205	COG0463	Glycosyl transferase, family 2
CHN56_RS07210	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS07215	COG0840	transmembrane signaling receptor activity
CHN56_RS07220	COG1012	belongs to the aldehyde dehydrogenase family
CHN56_RS07225	COG0531	amino acid
CHN56_RS07230	COG2223	nitrite transmembrane transporter activity
CHN56_RS07235	COG1442	glycosyl transferase family 8
CHN56_RS07240	COG1216	Glycosyl transferase, family 2
CHN56_RS07245	COG1442	glycosyl transferase family 8
CHN56_RS07250	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CHN56_RS07255	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CHN56_RS07260	COG1368	sulfuric ester hydrolase activity
CHN56_RS07265	COG2124	cytochrome p450
CHN56_RS07265	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CHN56_RS07275	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CHN56_RS07280	COG1846	Transcriptional regulator
CHN56_RS07285	COG0670	Belongs to the BI1 family
CHN56_RS07290	COG0196	riboflavin kinase activity
CHN56_RS07295	COG5583	Uncharacterized small protein (DUF2292)
CHN56_RS07305	COG4208	sulfate ABC transporter
CHN56_RS07310	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CHN56_RS07315	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CHN56_RS07320	COG1366	Belongs to the anti-sigma-factor antagonist family
CHN56_RS07330	COG0346	lactoylglutathione lyase activity
CHN56_RS07335	COG2329	Antibiotic biosynthesis monooxygenase
CHN56_RS07345	COG2323	membrane
CHN56_RS07355	COG0454	-acetyltransferase
CHN56_RS07360	COG3546	catalase activity
CHN56_RS07390	COG5444	nuclease activity
CHN56_RS07410	COG1131	(ABC) transporter
CHN56_RS07420	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CHN56_RS07425	COG1597	lipid kinase activity
CHN56_RS07430	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CHN56_RS07435	COG1309	transcriptional regulator
CHN56_RS07455	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CHN56_RS07460	COG1285	pathogenesis
CHN56_RS07465	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CHN56_RS07470	COG4851	CamS sex pheromone cAM373 precursor
CHN56_RS07480	COG0210	DNA helicase
CHN56_RS07495	COG0069	glutamate synthase activity
CHN56_RS07500	COG4496	protein, YerC YecD
CHN56_RS07505	COG1470	cell adhesion involved in biofilm formation
CHN56_RS07510	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
CHN56_RS07520	COG0151	Belongs to the GarS family
CHN56_RS07525	COG0138	bifunctional purine biosynthesis protein purh
CHN56_RS07530	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CHN56_RS07540	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CHN56_RS07555	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CHN56_RS07560	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CHN56_RS07565	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CHN56_RS07570	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CHN56_RS07575	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CHN56_RS07595	COG3064	Membrane
CHN56_RS07600	COG2252	PERMEase
CHN56_RS07625	COG1305	Transglutaminase-like
CHN56_RS07630	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
CHN56_RS07635	COG0714	Associated with various cellular activities
CHN56_RS07640	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CHN56_RS07645	COG1113	amino acid transport
CHN56_RS07650	COG2132	Multicopper oxidase
CHN56_RS07665	COG0823	Involved in the tonB-independent uptake of proteins
CHN56_RS07670	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CHN56_RS07675	COG1063	alcohol dehydrogenase
CHN56_RS07680	COG1595	DNA-templated transcription, initiation
CHN56_RS07695	COG4260	virion core protein, lumpy skin disease virus
CHN56_RS07700	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
CHN56_RS07705	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CHN56_RS07710	COG1842	Phage shock protein A
CHN56_RS07720	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CHN56_RS07725	COG2211	Major facilitator Superfamily
CHN56_RS07730	COG1063	alcohol dehydrogenase
CHN56_RS07735	COG0457	Tetratricopeptide repeat
CHN56_RS07740	COG2814	Major facilitator Superfamily
CHN56_RS07755	COG3403	YqcI/YcgG family
CHN56_RS07775	COG0156	8-amino-7-oxononanoate synthase activity
CHN56_RS07790	COG1266	CAAX protease self-immunity
CHN56_RS07800	COG0805	protein transport
CHN56_RS07805	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CHN56_RS07820	COG0488	(ABC) transporter
CHN56_RS07825	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CHN56_RS07830	COG0456	acetyltransferase
CHN56_RS07835	COG1214	PFAM Peptidase M22, glycoprotease
CHN56_RS07840	COG0802	atpase or kinase
CHN56_RS07845	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
CHN56_RS07885	COG2814	Major facilitator Superfamily
CHN56_RS07895	COG0604	alcohol dehydrogenase
CHN56_RS07900	COG3832	glyoxalase III activity
CHN56_RS07910	COG0531	amino acid
CHN56_RS07915	COG1309	transcriptional regulator
CHN56_RS07920	COG2076	Multidrug Resistance protein
CHN56_RS07925	COG2076	Multidrug Resistance protein
CHN56_RS07930	COG2807	transmembrane transport
CHN56_RS07935	COG2186	Transcriptional regulator
CHN56_RS07940	COG2188	Transcriptional regulator
CHN56_RS07945	COG2814	Major facilitator Superfamily
CHN56_RS07950	COG1388	LysM domain
CHN56_RS07955	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CHN56_RS07970	COG1819	glycosyl
CHN56_RS07975	COG1802	Transcriptional regulator
CHN56_RS07980	COG0473	3-isopropylmalate dehydrogenase activity
CHN56_RS07985	COG2226	methyltransferase
CHN56_RS07990	COG1051	belongs to the nudix hydrolase family
CHN56_RS07995	COG0697	spore germination
CHN56_RS08000	COG4978	Transcriptional regulator
CHN56_RS08000	COG0789	Transcriptional regulator
CHN56_RS08005	COG0456	acetyltransferase
CHN56_RS08010	COG0730	response to heat
CHN56_RS08020	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CHN56_RS08025	COG2814	Major facilitator Superfamily
CHN56_RS08035	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CHN56_RS08040	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CHN56_RS08045	COG0488	(ABC) transporter
CHN56_RS08050	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CHN56_RS08065	COG5577	PFAM Coat F domain
CHN56_RS08070	COG1063	alcohol dehydrogenase
CHN56_RS08080	COG5577	PFAM Coat F domain
CHN56_RS08085	COG1309	transcriptional regulator
CHN56_RS08090	COG2814	Major facilitator Superfamily
CHN56_RS08125	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CHN56_RS08135	COG0789	Transcriptional regulator
CHN56_RS08140	COG1064	alcohol dehydrogenase
CHN56_RS08155	COG0351	phosphomethylpyrimidine kinase
CHN56_RS08180	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CHN56_RS08185	COG2318	DinB family
CHN56_RS08190	COG0662	Cupin 2, conserved barrel domain protein
CHN56_RS08210	COG0277	FAD linked oxidase domain protein
CHN56_RS08225	COG0662	Cupin 2, conserved barrel domain protein
CHN56_RS08235	COG3621	Patatin-like phospholipase
CHN56_RS08250	COG1794	racemase activity, acting on amino acids and derivatives
CHN56_RS08255	COG1329	Transcriptional regulator
CHN56_RS08260	COG1278	Cold shock
CHN56_RS08265	COG2910	NAD(P)H-binding
CHN56_RS08270	COG1959	2 iron, 2 sulfur cluster binding
CHN56_RS08280	COG1846	Transcriptional regulator
CHN56_RS08285	COG1764	response to oxidative stress
CHN56_RS08295	COG0477	Major facilitator Superfamily
CHN56_RS08300	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CHN56_RS08315	COG2249	NAD(P)H dehydrogenase (quinone) activity
CHN56_RS08365	COG2183	response to ionizing radiation
CHN56_RS08370	COG2208	phosphoserine phosphatase activity
CHN56_RS08375	COG1191	sigma factor activity
CHN56_RS08385	COG1366	Belongs to the anti-sigma-factor antagonist family
CHN56_RS08390	COG2208	phosphoserine phosphatase activity
CHN56_RS08395	COG2172	sigma factor antagonist activity
CHN56_RS08400	COG1366	Belongs to the anti-sigma-factor antagonist family
CHN56_RS08405	COG1366	Belongs to the anti-sigma-factor antagonist family
CHN56_RS08410	COG2337	Toxic component of a toxin-antitoxin (TA) module
CHN56_RS08415	COG0864	Transcriptional regulator
CHN56_RS08420	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CHN56_RS08425	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CHN56_RS08435	COG0705	Rhomboid family
CHN56_RS08440	COG3428	Bacterial PH domain
CHN56_RS08445	COG3402	PFAM membrane-flanked domain
CHN56_RS08450	COG0513	Belongs to the DEAD box helicase family
CHN56_RS08455	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CHN56_RS08465	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CHN56_RS08470	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CHN56_RS08485	COG1960	acyl-CoA dehydrogenase activity
CHN56_RS08495	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CHN56_RS08500	COG1131	(ABC) transporter
CHN56_RS08505	COG0628	permease
CHN56_RS08510	COG1301	dicarboxylic acid transport
CHN56_RS08515	COG4565	transcriptional regulatory protein
CHN56_RS08520	COG3290	protein histidine kinase activity
CHN56_RS08525	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CHN56_RS08530	COG3546	catalase activity
CHN56_RS08535	COG2329	Antibiotic biosynthesis monooxygenase
CHN56_RS08540	COG0662	Cupin 2, conserved barrel domain protein
CHN56_RS08545	COG3729	General stress protein
CHN56_RS08550	COG2217	Heavy metal translocating P-type atpase
CHN56_RS08555	COG2076	Multidrug Resistance protein
CHN56_RS08565	COG4876	unkown
CHN56_RS08580	COG1914	H( )-stimulated, divalent metal cation uptake system
CHN56_RS08650	COG0028	Belongs to the TPP enzyme family
CHN56_RS08655	COG0494	nUDIX hydrolase
CHN56_RS08660	COG0531	amino acid
CHN56_RS08670	COG1215	transferase activity, transferring glycosyl groups
CHN56_RS08675	COG5298	Protein conserved in bacteria
CHN56_RS08680	COG3706	GGDEF domain
CHN56_RS08685	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CHN56_RS08690	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CHN56_RS08690	COG0551	DNA topoisomerase type I activity
CHN56_RS08695	COG1522	sequence-specific DNA binding
CHN56_RS08700	COG2814	Major facilitator Superfamily
CHN56_RS08710	COG3871	stress protein (general stress protein 26)
CHN56_RS08715	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CHN56_RS08720	COG1917	Cupin 2, conserved barrel domain protein
CHN56_RS08725	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS08730	COG0318	PFAM AMP-dependent synthetase and ligase
CHN56_RS08735	COG3711	transcriptional antiterminator
CHN56_RS08740	COG4989	oxidoreductase activity
CHN56_RS08745	COG0768	penicillin binding
CHN56_RS08750	COG2329	Antibiotic biosynthesis monooxygenase
CHN56_RS08760	COG2755	lipolytic protein G-D-S-L family
CHN56_RS08765	COG1414	Transcriptional regulator
CHN56_RS08770	COG1984	allophanate hydrolase subunit 2
CHN56_RS08775	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CHN56_RS08785	COG1914	H( )-stimulated, divalent metal cation uptake system
CHN56_RS08795	COG0561	phosphatase activity
CHN56_RS08805	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CHN56_RS08815	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CHN56_RS08820	COG2213	PTS system mannitol-specific
CHN56_RS08830	COG1349	DNA-binding transcription factor activity
CHN56_RS08835	COG1276	copper resistance
CHN56_RS08835	COG2372	response to copper ion
CHN56_RS08840	COG4549	nuclear export factor GLE1
CHN56_RS08845	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS08850	COG4975	Glucose uptake
CHN56_RS08855	COG1012	belongs to the aldehyde dehydrogenase family
CHN56_RS08860	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CHN56_RS08865	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CHN56_RS08870	COG0640	Transcriptional regulator
CHN56_RS08875	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CHN56_RS08880	COG0778	Nitroreductase
CHN56_RS08885	COG1309	transcriptional regulator
CHN56_RS08890	COG2814	Major facilitator Superfamily
CHN56_RS08895	COG4607	ABC-type enterochelin transport system periplasmic component
CHN56_RS08900	COG4604	ABC transporter, ATP-binding protein
CHN56_RS08905	COG4605	iron ion homeostasis
CHN56_RS08910	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CHN56_RS08915	COG0527	aspartate kinase activity
CHN56_RS08930	COG0457	Tetratricopeptide repeat
CHN56_RS08935	COG5002	protein histidine kinase activity
CHN56_RS08935	COG3850	Histidine kinase
CHN56_RS08940	COG0745	RESPONSE REGULATOR receiver
CHN56_RS08945	COG0577	efflux transmembrane transporter activity
CHN56_RS08950	COG1136	(ABC) transporter
CHN56_RS08955	COG2079	MmgE PrpD family protein
CHN56_RS08960	COG1473	amidohydrolase
CHN56_RS08965	COG1126	abc transporter atp-binding protein
CHN56_RS08970	COG0765	amino acid transport
CHN56_RS08975	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CHN56_RS08980	COG0456	acetyltransferase
CHN56_RS08985	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CHN56_RS08990	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CHN56_RS09000	COG0697	spore germination
CHN56_RS09010	COG5434	Belongs to the glycosyl hydrolase 28 family
CHN56_RS09015	COG3104	oligopeptide transport
CHN56_RS09030	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CHN56_RS09035	COG0163	prenyltransferase activity
CHN56_RS09040	COG0583	DNA-binding transcription factor activity
CHN56_RS09045	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CHN56_RS09050	COG0765	amino acid transport
CHN56_RS09055	COG1126	abc transporter atp-binding protein
CHN56_RS09060	COG2364	Membrane
CHN56_RS09075	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
CHN56_RS09080	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS09085	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS09090	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS09095	COG1733	regulation of RNA biosynthetic process
CHN56_RS09100	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
CHN56_RS09105	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CHN56_RS09110	COG3209	COG3209 Rhs family protein
CHN56_RS09125	COG2723	6-phospho-beta-galactosidase activity
CHN56_RS09135	COG1714	RDD family
CHN56_RS09140	COG1063	alcohol dehydrogenase
CHN56_RS09145	COG0523	cobalamin synthesis protein
CHN56_RS09150	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CHN56_RS09155	COG2146	nitrite reductase [NAD(P)H] activity
CHN56_RS09160	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CHN56_RS09160	COG1587	Uroporphyrinogen-III synthase
CHN56_RS09170	COG2508	Transcriptional regulator
CHN56_RS09175	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CHN56_RS09180	COG1012	belongs to the aldehyde dehydrogenase family
CHN56_RS09185	COG0506	proline dehydrogenase activity
CHN56_RS09190	COG3541	Predicted nucleotidyltransferase
CHN56_RS09195	COG3458	cephalosporin-C deacetylase activity
CHN56_RS09200	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CHN56_RS09205	COG2271	Major facilitator Superfamily
CHN56_RS09215	COG1660	Displays ATPase and GTPase activities
CHN56_RS09230	COG3665	Urea carboxylase-associated protein
CHN56_RS09235	COG1113	amino acid transport
CHN56_RS09240	COG3403	YqcI/YcgG family
CHN56_RS09245	COG1280	lysine exporter protein (LysE YggA)
CHN56_RS09255	COG1846	Transcriptional regulator
CHN56_RS09260	COG2814	Major facilitator Superfamily
CHN56_RS09270	COG0366	Alpha amylase catalytic
CHN56_RS09280	COG1288	antiporter activity
CHN56_RS09285	COG1473	amidohydrolase
CHN56_RS09290	COG2113	Glycine betaine
CHN56_RS09295	COG4176	ABC-type proline glycine betaine transport system permease component
CHN56_RS09300	COG4175	Glycine betaine
CHN56_RS09300	COG0517	IMP dehydrogenase activity
CHN56_RS09305	COG0640	Transcriptional regulator
CHN56_RS09310	COG2814	Major facilitator Superfamily
CHN56_RS09315	COG0477	Major facilitator Superfamily
CHN56_RS09320	COG3853	Toxic anion resistance protein (TelA)
CHN56_RS09330	COG0861	Integral membrane protein TerC family
CHN56_RS09335	COG2310	stress, protein
CHN56_RS09340	COG2310	stress, protein
CHN56_RS09345	COG2310	stress, protein
CHN56_RS09350	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CHN56_RS09355	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CHN56_RS09360	COG1121	(ABC) transporter
CHN56_RS09365	COG0803	Belongs to the bacterial solute-binding protein 9 family
CHN56_RS09370	COG0366	Alpha amylase catalytic
CHN56_RS09375	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS09380	COG0457	Tetratricopeptide repeat
CHN56_RS09385	COG1876	peptidase activity
CHN56_RS09390	COG1595	DNA-templated transcription, initiation
CHN56_RS09395	COG1595	DNA-templated transcription, initiation
CHN56_RS09405	COG0667	Aldo Keto reductase
CHN56_RS09410	COG1405	negative regulation of cell septum assembly
CHN56_RS09410	COG3012	SEC-C Motif Domain Protein
CHN56_RS09415	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
CHN56_RS09420	COG0252	asparaginase activity
CHN56_RS09425	COG1309	transcriptional regulator
CHN56_RS09430	COG0477	Major facilitator Superfamily
CHN56_RS09435	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CHN56_RS09445	COG0805	protein transport
CHN56_RS09450	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CHN56_RS09455	COG3540	Alkaline phosphatase
CHN56_RS09465	COG3773	Cell wall hydrolase
CHN56_RS09485	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CHN56_RS09490	COG2259	Doxx family
CHN56_RS09495	COG0346	lactoylglutathione lyase activity
CHN56_RS09500	COG0778	Nitroreductase
CHN56_RS09505	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CHN56_RS09515	COG3173	Aminoglycoside phosphotransferase
CHN56_RS09520	COG0784	Response regulator, receiver
CHN56_RS09525	COG4191	Histidine kinase
CHN56_RS09530	COG2066	Belongs to the glutaminase family
CHN56_RS09535	COG1115	amino acid carrier protein
CHN56_RS09540	COG2040	homocysteine
CHN56_RS09545	COG0833	amino acid
CHN56_RS09550	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CHN56_RS09555	COG1301	dicarboxylic acid transport
CHN56_RS09570	COG0688	phosphatidylethanolamine metabolic process
CHN56_RS09575	COG0586	Pfam SNARE associated Golgi protein
CHN56_RS09580	COG1183	phosphatidylcholine synthase activity
CHN56_RS09590	COG0371	Dehydrogenase
CHN56_RS09605	COG3409	Peptidoglycan-binding domain 1 protein
CHN56_RS09615	COG2368	4-hydroxyphenylacetate
CHN56_RS09630	COG2271	Major facilitator Superfamily
CHN56_RS09635	COG0584	glycerophosphoryl diester phosphodiesterase
CHN56_RS09660	COG0531	amino acid
CHN56_RS09700	COG1131	(ABC) transporter
CHN56_RS09705	COG2197	response regulator
CHN56_RS09710	COG4585	Histidine kinase
CHN56_RS09715	COG1011	Hydrolase
CHN56_RS09720	COG1113	amino acid transport
CHN56_RS09725	COG1846	Transcriptional regulator
CHN56_RS09730	COG1380	Effector of murein hydrolase LrgA
CHN56_RS09735	COG1346	cytolysis
CHN56_RS09745	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CHN56_RS09750	COG0515	serine threonine protein kinase
CHN56_RS09775	COG4856	YbbR-like protein
CHN56_RS09780	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CHN56_RS09785	COG5662	AntiSigma factor
CHN56_RS09790	COG1595	DNA-templated transcription, initiation
CHN56_RS09825	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CHN56_RS09835	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CHN56_RS09835	COG1263	PTS System
CHN56_RS09840	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CHN56_RS09845	COG1472	Belongs to the glycosyl hydrolase 3 family
CHN56_RS09850	COG3876	Protein conserved in bacteria
CHN56_RS09855	COG2207	Transcriptional regulator
CHN56_RS09855	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CHN56_RS09860	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CHN56_RS09865	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CHN56_RS09870	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CHN56_RS09875	COG2819	hydrolase of the alpha beta superfamily
CHN56_RS09880	COG0385	Bile acid
CHN56_RS09885	COG0659	secondary active sulfate transmembrane transporter activity
CHN56_RS09900	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CHN56_RS09905	COG0738	Major facilitator superfamily
CHN56_RS09965	COG0726	polysaccharide deacetylase
CHN56_RS09970	COG2194	sulfuric ester hydrolase activity
CHN56_RS09980	COG0489	protein tyrosine kinase activity
CHN56_RS09985	COG0860	N-Acetylmuramoyl-L-alanine amidase
CHN56_RS09995	COG2318	DinB family
CHN56_RS10000	COG2226	methyltransferase
CHN56_RS10020	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CHN56_RS10025	COG1122	ATPase activity
CHN56_RS10030	COG1122	ATPase activity
CHN56_RS10055	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CHN56_RS10070	COG0024	Methionine aminopeptidase
CHN56_RS10080	COG0201	protein transport
CHN56_RS10095	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CHN56_RS10190	COG0596	Alpha beta hydrolase
CHN56_RS10215	COG1358	cellular component organization or biogenesis
CHN56_RS10230	COG2813	Specifically methylates the guanine in position
CHN56_RS10255	COG0250	Participates in transcription elongation, termination and antitermination
CHN56_RS10260	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CHN56_RS10270	COG1595	DNA-templated transcription, initiation
CHN56_RS10275	COG3688	RNA-binding protein containing a PIN domain
CHN56_RS10280	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CHN56_RS10285	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
CHN56_RS10295	COG1045	serine acetyltransferase
CHN56_RS10315	COG4956	integral membrane protein (PIN domain superfamily)
CHN56_RS10320	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
CHN56_RS10325	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CHN56_RS10330	COG0542	response to heat
CHN56_RS10340	COG3880	PFAM UvrB UvrC protein
CHN56_RS10345	COG4463	regulation of RNA biosynthetic process
CHN56_RS10425	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CHN56_RS10430	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CHN56_RS10435	COG1396	sequence-specific DNA binding
CHN56_RS10440	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CHN56_RS10445	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CHN56_RS10450	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CHN56_RS10455	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CHN56_RS10460	COG0512	Glutamine amidotransferase of anthranilate synthase
CHN56_RS10465	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CHN56_RS10470	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CHN56_RS10475	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CHN56_RS10490	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CHN56_RS10495	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
CHN56_RS10500	COG0037	tRNA processing
CHN56_RS10505	COG0515	serine threonine protein kinase
CHN56_RS10510	COG2304	oxidoreductase activity
CHN56_RS10515	COG2208	phosphoserine phosphatase activity
CHN56_RS10530	COG1098	S1 RNA binding domain
CHN56_RS10535	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CHN56_RS10550	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CHN56_RS10555	COG3956	TIGRFAM MazG family protein
CHN56_RS10560	COG2244	polysaccharide biosynthetic process
CHN56_RS10565	COG2002	toxin-antitoxin pair type II binding
CHN56_RS10570	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CHN56_RS10590	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CHN56_RS10605	COG0251	oxidation-reduction process
CHN56_RS10610	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CHN56_RS10625	COG4466	Protein conserved in bacteria
CHN56_RS10635	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CHN56_RS10640	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CHN56_RS10645	COG3583	domain protein
CHN56_RS10645	COG3584	3D domain protein
CHN56_RS10650	COG0084	hydrolase, TatD family'
CHN56_RS10655	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CHN56_RS10655	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CHN56_RS10660	COG2002	toxin-antitoxin pair type II binding
CHN56_RS10665	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CHN56_RS10675	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CHN56_RS10685	COG1774	PSP1 C-terminal conserved region
CHN56_RS10690	COG0470	DNA polymerase III
CHN56_RS10695	COG1728	Protein conserved in bacteria
CHN56_RS10700	COG3870	Protein conserved in bacteria
CHN56_RS10710	COG1982	Orn Lys Arg decarboxylase major
CHN56_RS10715	COG3853	Toxic anion resistance protein (TelA)
CHN56_RS10720	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
CHN56_RS10770	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CHN56_RS10775	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CHN56_RS10785	COG0590	tRNA wobble adenosine to inosine editing
CHN56_RS10790	COG1335	isochorismatase
CHN56_RS10795	COG1388	LysM domain
CHN56_RS10795	COG3858	chitin binding
CHN56_RS10800	COG1428	Deoxynucleoside kinase
CHN56_RS10805	COG1428	Deoxynucleoside kinase
CHN56_RS10815	COG1929	Belongs to the glycerate kinase type-1 family
CHN56_RS10835	COG1686	Belongs to the peptidase S11 family
CHN56_RS10840	COG0517	IMP dehydrogenase activity
CHN56_RS10840	COG0516	GMP reductase activity
CHN56_RS10875	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CHN56_RS10880	COG0187	DNA topoisomerase II activity
CHN56_RS10895	COG2501	S4 domain
CHN56_RS10900	COG0592	DNA-directed DNA polymerase activity
CHN56_RS10920	COG0706	membrane insertase activity
CHN56_RS10925	COG1847	R3H domain protein
CHN56_RS10950	COG1192	Involved in chromosome partitioning
CHN56_RS10955	COG1475	DNA binding
CHN56_RS10970	COG3949	Membrane
CHN56_RS10975	COG4481	Protein conserved in bacteria
CHN56_RS10980	COG0243	molybdopterin cofactor binding
CHN56_RS10985	COG0012	GTP binding
CHN56_RS10995	COG0629	single-stranded DNA binding
CHN56_RS11005	COG2169	Transcriptional regulator
CHN56_RS11010	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CHN56_RS11015	COG0708	Exodeoxyribonuclease III
CHN56_RS11020	COG1609	Transcriptional regulator
CHN56_RS11025	COG0346	lactoylglutathione lyase activity
CHN56_RS11030	COG2814	Major facilitator Superfamily
CHN56_RS11030	COG0477	Major facilitator Superfamily
CHN56_RS11035	COG1266	CAAX protease self-immunity
CHN56_RS11040	COG1331	Highly conserved protein containing a thioredoxin domain
CHN56_RS11055	COG1331	Highly conserved protein containing a thioredoxin domain
CHN56_RS11060	COG0697	spore germination
CHN56_RS11065	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CHN56_RS11070	COG2153	protein acetylation
CHN56_RS11075	COG1846	Transcriptional regulator
CHN56_RS11080	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CHN56_RS11085	COG1846	Transcriptional regulator
CHN56_RS11090	COG0778	Nitroreductase
CHN56_RS11100	COG0583	DNA-binding transcription factor activity
CHN56_RS11105	COG2211	Major facilitator Superfamily
CHN56_RS11110	COG2318	DinB family
CHN56_RS11120	COG1621	beta-fructofuranosidase activity
CHN56_RS11125	COG1621	beta-fructofuranosidase activity
CHN56_RS11130	COG0697	spore germination
CHN56_RS11140	COG1733	regulation of RNA biosynthetic process
CHN56_RS11145	COG5577	PFAM Coat F domain
CHN56_RS11155	COG4241	membrane
CHN56_RS11160	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
CHN56_RS11180	COG0438	transferase activity, transferring glycosyl groups
CHN56_RS11185	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
CHN56_RS11195	COG0297	glycogen (starch) synthase activity
CHN56_RS11205	COG3093	addiction module antidote protein HigA
CHN56_RS11220	COG0305	Participates in initiation and elongation during chromosome replication
CHN56_RS11225	COG0346	lactoylglutathione lyase activity
CHN56_RS11260	COG0745	RESPONSE REGULATOR receiver
CHN56_RS11265	COG5002	protein histidine kinase activity
CHN56_RS11270	COG4863	YycH protein
CHN56_RS11275	COG4853	Protein conserved in bacteria
CHN56_RS11280	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CHN56_RS11285	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CHN56_RS11300	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CHN56_RS11315	COG0488	(ABC) transporter
CHN56_RS11325	COG3829	transcription factor binding
CHN56_RS11330	COG0640	Transcriptional regulator
CHN56_RS11335	COG5658	integral membrane protein
CHN56_RS11340	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CHN56_RS11345	COG0833	amino acid
CHN56_RS11350	COG0010	Belongs to the arginase family
CHN56_RS11355	COG0457	Tetratricopeptide repeat
CHN56_RS11360	COG0456	acetyltransferase
CHN56_RS11365	COG0667	Aldo Keto reductase
CHN56_RS11370	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
CHN56_RS11430	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
CHN56_RS11435	COG2068	MobA-Related Protein
CHN56_RS11450	COG2080	2 iron, 2 sulfur cluster binding
CHN56_RS11460	COG1113	amino acid transport
CHN56_RS11470	COG3634	alkyl hydroperoxide reductase activity
CHN56_RS11475	COG0450	alkyl hydroperoxide reductase
CHN56_RS11485	COG1714	RDD family
CHN56_RS11490	COG2814	Major facilitator Superfamily
CHN56_RS11495	COG0640	Transcriptional regulator
CHN56_RS11505	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CHN56_RS11510	COG1012	belongs to the aldehyde dehydrogenase family
CHN56_RS11515	COG1309	transcriptional regulator
CHN56_RS11525	COG3239	Fatty acid desaturase
CHN56_RS11530	COG4585	Histidine kinase
CHN56_RS11535	COG2197	response regulator
CHN56_RS11540	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS11555	COG2814	Major facilitator Superfamily
CHN56_RS11560	COG0667	Aldo Keto reductase
CHN56_RS11565	COG1349	DNA-binding transcription factor activity
CHN56_RS11595	COG2814	Major facilitator Superfamily
CHN56_RS11605	COG1082	Xylose isomerase domain protein TIM barrel
CHN56_RS11620	COG0745	RESPONSE REGULATOR receiver
CHN56_RS11625	COG2205	protein histidine kinase activity
CHN56_RS11630	COG1136	(ABC) transporter
CHN56_RS11635	COG0577	efflux transmembrane transporter activity
CHN56_RS11640	COG5294	Protein conserved in bacteria
CHN56_RS11645	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CHN56_RS11675	COG0561	phosphatase activity
CHN56_RS11680	COG2390	Transcriptional regulator
CHN56_RS11690	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CHN56_RS11695	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
CHN56_RS11700	COG0833	amino acid
CHN56_RS11705	COG0010	Belongs to the arginase family
CHN56_RS11730	COG3507	Belongs to the glycosyl hydrolase 43 family
CHN56_RS11780	COG0589	response to stress
CHN56_RS11785	COG0697	spore germination
CHN56_RS11795	COG3209	COG3209 Rhs family protein
CHN56_RS11830	COG0513	Belongs to the DEAD box helicase family
CHN56_RS11835	COG2270	Major facilitator Superfamily
CHN56_RS11845	COG2273	Hydrolase Family 16
CHN56_RS11850	COG2851	Citrate transporter
CHN56_RS11855	COG0753	catalase activity
CHN56_RS11855	COG0693	protein deglycase activity
CHN56_RS11875	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CHN56_RS11880	COG0500	methyltransferase
CHN56_RS11885	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CHN56_RS11890	COG4894	glucomannan catabolic process
CHN56_RS11900	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CHN56_RS11910	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CHN56_RS11915	COG2508	Transcriptional regulator
CHN56_RS11920	COG3842	ATPase activity
CHN56_RS11925	COG0726	polysaccharide deacetylase
CHN56_RS11930	COG3493	citrate carrier protein
CHN56_RS11935	COG1271	oxidase subunit
CHN56_RS11940	COG1294	oxidase, subunit
CHN56_RS11945	COG4988	ABC transporter
CHN56_RS11950	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CHN56_RS11955	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CHN56_RS11960	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CHN56_RS11965	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
CHN56_RS11970	COG0753	catalase activity
CHN56_RS11980	COG1482	cell wall glycoprotein biosynthetic process
CHN56_RS11985	COG1940	carbohydrate kinase activity
CHN56_RS11990	COG2723	6-phospho-beta-galactosidase activity
CHN56_RS11995	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CHN56_RS12000	COG1447	Phosphotransferase system cellobiose-specific component IIA
CHN56_RS12010	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CHN56_RS12015	COG0640	Transcriptional regulator
CHN56_RS12025	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CHN56_RS12030	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CHN56_RS12045	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CHN56_RS12045	COG3711	transcriptional antiterminator
CHN56_RS12050	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CHN56_RS12055	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CHN56_RS12060	COG1447	Phosphotransferase system cellobiose-specific component IIA
CHN56_RS12065	COG1486	melibiose metabolic process
CHN56_RS12070	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CHN56_RS12075	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CHN56_RS12085	COG1696	Membrane protein involved in D-alanine export
CHN56_RS12105	COG1575	Belongs to the MenA family. Type 1 subfamily
CHN56_RS12110	COG2357	RelA SpoT domain protein
CHN56_RS12120	COG1442	glycosyl transferase family 8
CHN56_RS12125	COG1404	Belongs to the peptidase S8 family
CHN56_RS12130	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CHN56_RS12135	COG0346	lactoylglutathione lyase activity
CHN56_RS12140	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CHN56_RS12145	COG5504	Zn-dependent protease
CHN56_RS12150	COG0789	Transcriptional regulator
CHN56_RS12155	COG4895	conserved protein (DUF2196)
CHN56_RS12160	COG1346	cytolysis
CHN56_RS12170	COG0583	DNA-binding transcription factor activity
CHN56_RS12185	COG2822	iron ion transport
CHN56_RS12190	COG2837	iron assimilation
CHN56_RS12195	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CHN56_RS12215	COG1309	transcriptional regulator
CHN56_RS12220	COG2246	polysaccharide biosynthetic process
CHN56_RS12225	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CHN56_RS12230	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
CHN56_RS12235	COG2261	transglycosylase associated protein
CHN56_RS12240	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CHN56_RS12245	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CHN56_RS12270	COG0772	Belongs to the SEDS family
CHN56_RS12275	COG0778	Nitroreductase
CHN56_RS12280	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CHN56_RS12285	COG1404	Belongs to the peptidase S8 family
CHN56_RS12295	COG3711	transcriptional antiterminator
CHN56_RS12300	COG1263	PTS System
CHN56_RS12300	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CHN56_RS12305	COG1621	beta-fructofuranosidase activity
CHN56_RS12315	COG0351	phosphomethylpyrimidine kinase
CHN56_RS12320	COG1695	Transcriptional regulator
CHN56_RS12335	COG1216	Glycosyl transferase, family 2
CHN56_RS12350	COG2233	PERMEase
CHN56_RS12355	COG2363	Small membrane protein
CHN56_RS12365	COG0463	Glycosyl transferase, family 2
CHN56_RS12370	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CHN56_RS12375	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CHN56_RS12380	COG0456	acetyltransferase
CHN56_RS12385	COG2089	acid synthase
CHN56_RS12390	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
CHN56_RS12395	COG3980	spore coat polysaccharide biosynthesis protein
CHN56_RS12400	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CHN56_RS12405	COG1088	dTDP-glucose 4,6-dehydratase activity
CHN56_RS12410	COG1091	dTDP-4-dehydrorhamnose reductase activity
CHN56_RS12415	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
CHN56_RS12425	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CHN56_RS12430	COG1012	belongs to the aldehyde dehydrogenase family
CHN56_RS12435	COG4187	Peptidase family M20/M25/M40
CHN56_RS12440	COG0833	amino acid
CHN56_RS12445	COG2814	Major facilitator Superfamily
CHN56_RS12450	COG2814	Major facilitator Superfamily
CHN56_RS12480	COG0436	Aminotransferase
CHN56_RS12485	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS12495	COG0280	phosphate acetyltransferase
CHN56_RS12505	COG0583	DNA-binding transcription factor activity
CHN56_RS12535	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CHN56_RS12540	COG1131	(ABC) transporter
CHN56_RS12550	COG1695	Transcriptional regulator
CHN56_RS12565	COG1078	dGTPase activity
CHN56_RS12570	COG3465	dGTPase activity
CHN56_RS12575	COG0531	amino acid
CHN56_RS12585	COG1846	Transcriptional regulator
CHN56_RS12590	COG1942	4-Oxalocrotonate Tautomerase
CHN56_RS12595	COG1994	Peptidase M50
CHN56_RS12610	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CHN56_RS12615	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CHN56_RS12620	COG0010	Belongs to the arginase family
CHN56_RS12625	COG0018	arginyl-trna synthetase
CHN56_RS12655	COG0457	Tetratricopeptide repeat
CHN56_RS12660	COG4506	Protein conserved in bacteria
CHN56_RS12670	COG2223	nitrite transmembrane transporter activity
CHN56_RS12675	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CHN56_RS12685	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CHN56_RS12690	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CHN56_RS12695	COG1140	nitrate reductase beta subunit
CHN56_RS12700	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CHN56_RS12705	COG2181	nitrate reductase activity
CHN56_RS12715	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CHN56_RS12720	COG1132	(ABC) transporter
CHN56_RS12735	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CHN56_RS12740	COG0247	lactate metabolic process
CHN56_RS12740	COG2181	nitrate reductase activity
CHN56_RS12755	COG4821	SIS domain
CHN56_RS12760	COG2204	response regulator
CHN56_RS12765	COG0191	fructose-bisphosphate aldolase activity
CHN56_RS12775	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CHN56_RS12780	COG1494	fructose-1,6-bisphosphatase
CHN56_RS12785	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CHN56_RS12800	COG0281	malic enzyme
CHN56_RS12805	COG0679	Auxin Efflux Carrier
CHN56_RS12810	COG0789	Transcriptional regulator
CHN56_RS12815	COG0346	lactoylglutathione lyase activity
CHN56_RS12820	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CHN56_RS12825	COG2890	protein-(glutamine-N5) methyltransferase activity
CHN56_RS12845	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CHN56_RS12850	COG0009	L-threonylcarbamoyladenylate synthase
CHN56_RS12860	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CHN56_RS12865	COG0698	ribose 5-phosphate isomerase
CHN56_RS12935	COG4836	Membrane
CHN56_RS12945	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CHN56_RS12950	COG2385	sporulation resulting in formation of a cellular spore
CHN56_RS12955	COG2304	oxidoreductase activity
CHN56_RS12960	COG2304	oxidoreductase activity
CHN56_RS12970	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CHN56_RS12980	COG0457	Tetratricopeptide repeat
CHN56_RS12985	COG1994	Peptidase M50
CHN56_RS12995	COG0831	urea catabolic process
CHN56_RS13010	COG1959	2 iron, 2 sulfur cluster binding
CHN56_RS13020	COG0726	polysaccharide deacetylase
CHN56_RS13030	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CHN56_RS13045	COG1247	-acetyltransferase
CHN56_RS13050	COG0739	heme binding
CHN56_RS13060	COG0671	phosphoesterase, PA-phosphatase related
CHN56_RS13065	COG0772	Belongs to the SEDS family
CHN56_RS13070	COG0347	Belongs to the P(II) protein family
CHN56_RS13075	COG0004	ammonium transporteR
CHN56_RS13080	COG1335	isochorismatase
CHN56_RS13085	COG0477	Major facilitator Superfamily
CHN56_RS13090	COG1953	Uracil, thiamine, allantoin
CHN56_RS13095	COG2814	Major facilitator Superfamily
CHN56_RS13100	COG1846	Transcriptional regulator
CHN56_RS13105	COG1609	Transcriptional regulator
CHN56_RS13110	COG1077	Cell shape determining protein MreB Mrl
CHN56_RS13115	COG4786	Flagellar basal body rod
CHN56_RS13120	COG4786	Flagellar basal body rod
CHN56_RS13125	COG0457	Tetratricopeptide repeat
CHN56_RS13150	COG0629	single-stranded DNA binding
CHN56_RS13155	COG1349	DNA-binding transcription factor activity
CHN56_RS13160	COG0561	phosphatase activity
CHN56_RS13165	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CHN56_RS13170	COG4715	Zinc finger, swim domain protein
CHN56_RS13185	COG3944	biosynthesis protein
CHN56_RS13190	COG0489	protein tyrosine kinase activity
CHN56_RS13195	COG4464	protein tyrosine phosphatase activity
CHN56_RS13200	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CHN56_RS13205	COG3878	Protein conserved in bacteria
CHN56_RS13220	COG5444	nuclease activity
CHN56_RS13245	COG0583	DNA-binding transcription factor activity
CHN56_RS13250	COG0655	NAD(P)H dehydrogenase (quinone) activity
CHN56_RS13260	COG2059	Chromate
CHN56_RS13265	COG2059	Chromate
CHN56_RS13270	COG1522	sequence-specific DNA binding
CHN56_RS13275	COG0405	Gamma-glutamyltransferase
CHN56_RS13285	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CHN56_RS13295	COG5337	Spore coat protein CotH
CHN56_RS13310	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CHN56_RS13315	COG0583	DNA-binding transcription factor activity
CHN56_RS13320	COG0028	Belongs to the TPP enzyme family
CHN56_RS13325	COG3527	Alpha-acetolactate decarboxylase
CHN56_RS13330	COG2249	NAD(P)H dehydrogenase (quinone) activity
CHN56_RS13335	COG3103	Sh3 type 3 domain protein
CHN56_RS13340	COG1879	ABC-type sugar transport system periplasmic component
CHN56_RS13345	COG1172	Belongs to the binding-protein-dependent transport system permease family
CHN56_RS13350	COG1129	ABC transporter
CHN56_RS13360	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CHN56_RS13365	COG1609	Transcriptional regulator
CHN56_RS13375	COG0814	amino acid
CHN56_RS13380	COG0697	spore germination
CHN56_RS13390	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CHN56_RS13400	COG2843	Capsule synthesis protein
CHN56_RS13410	COG0791	NLP P60 protein
CHN56_RS13415	COG2433	Pfam Transposase IS66
CHN56_RS13420	COG0561	phosphatase activity
CHN56_RS13425	COG1316	TRANSCRIPTIONal
CHN56_RS13430	COG2814	Major facilitator Superfamily
CHN56_RS13435	COG1215	transferase activity, transferring glycosyl groups
CHN56_RS13445	COG0814	amino acid
CHN56_RS13455	COG1482	cell wall glycoprotein biosynthetic process
CHN56_RS13460	COG4193	domain, Protein
CHN56_RS13465	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CHN56_RS13470	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
CHN56_RS13475	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CHN56_RS13485	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CHN56_RS13490	COG1682	transport, permease protein
CHN56_RS13495	COG1134	teichoic acid transport
CHN56_RS13500	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CHN56_RS13505	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CHN56_RS13510	COG1316	TRANSCRIPTIONal
CHN56_RS13520	COG2247	cell wall binding repeat
CHN56_RS13520	COG2385	sporulation resulting in formation of a cellular spore
CHN56_RS13525	COG2247	cell wall binding repeat
CHN56_RS13525	COG0860	N-Acetylmuramoyl-L-alanine amidase
CHN56_RS13535	COG2244	polysaccharide biosynthetic process
CHN56_RS13540	COG0297	glycogen (starch) synthase activity
CHN56_RS13540	COG0438	transferase activity, transferring glycosyl groups
CHN56_RS13545	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CHN56_RS13550	COG3307	-O-antigen
CHN56_RS13555	COG3206	protein involved in exopolysaccharide biosynthesis
CHN56_RS13560	COG1215	transferase activity, transferring glycosyl groups
CHN56_RS13565	COG0438	transferase activity, transferring glycosyl groups
CHN56_RS13570	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CHN56_RS13575	COG1316	TRANSCRIPTIONal
CHN56_RS13580	COG1739	Uncharacterized protein family UPF0029
CHN56_RS13585	COG4585	Histidine kinase
CHN56_RS13590	COG2197	response regulator
CHN56_RS13595	COG1307	EDD domain protein, DegV family
CHN56_RS13600	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
CHN56_RS13610	COG1040	competence protein
CHN56_RS13620	COG2747	anti-sigma28 factor FlgM
CHN56_RS13625	COG3418	PFAM FlgN family protein
CHN56_RS13630	COG4786	Flagellar basal body rod
CHN56_RS13630	COG1256	bacterial-type flagellum assembly
CHN56_RS13635	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CHN56_RS13655	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CHN56_RS13660	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CHN56_RS13665	COG1516	flagellar protein fliS
CHN56_RS13680	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CHN56_RS13695	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CHN56_RS13700	COG2010	Cytochrome c
CHN56_RS13705	COG2884	Cell division ATP-binding protein ftsE
CHN56_RS13710	COG2177	Part of the ABC transporter FtsEX involved in
CHN56_RS13715	COG3420	alginic acid biosynthetic process
CHN56_RS13720	COG0793	Belongs to the peptidase S41A family
CHN56_RS13720	COG3409	Peptidoglycan-binding domain 1 protein
CHN56_RS13730	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CHN56_RS13740	COG2814	Major facilitator Superfamily
CHN56_RS13745	COG1309	transcriptional regulator
CHN56_RS13750	COG3848	Pyruvate phosphate dikinase
CHN56_RS13750	COG0574	Belongs to the PEP-utilizing enzyme family
CHN56_RS13755	COG4897	Protein conserved in bacteria
CHN56_RS13765	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CHN56_RS13780	COG3595	metallopeptidase activity
CHN56_RS13785	COG1983	PspC domain protein
CHN56_RS13790	COG1950	PFAM Membrane protein of
CHN56_RS13795	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CHN56_RS13800	COG1309	transcriptional regulator
CHN56_RS13805	COG2188	Transcriptional regulator
CHN56_RS13815	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CHN56_RS13835	COG0110	maltose O-acetyltransferase activity
CHN56_RS13840	COG4990	cell redox homeostasis
CHN56_RS13855	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CHN56_RS13880	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CHN56_RS13880	COG0140	phosphoribosyl-ATP diphosphatase activity
CHN56_RS13885	COG1132	(ABC) transporter
CHN56_RS13890	COG0745	RESPONSE REGULATOR receiver
CHN56_RS13895	COG5002	protein histidine kinase activity
CHN56_RS13900	COG0457	Tetratricopeptide repeat
CHN56_RS13905	COG3883	PFAM NLP P60 protein
CHN56_RS13905	COG0791	NLP P60 protein
CHN56_RS13910	COG0492	ferredoxin-NADP+ reductase activity
CHN56_RS13915	COG1051	belongs to the nudix hydrolase family
CHN56_RS13925	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CHN56_RS13935	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CHN56_RS13940	COG2162	N-hydroxyarylamine O-acetyltransferase activity
CHN56_RS13945	COG4290	ribonuclease
CHN56_RS13950	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CHN56_RS13960	COG0288	reversible hydration of carbon dioxide
CHN56_RS13965	COG0659	secondary active sulfate transmembrane transporter activity
CHN56_RS13970	COG1694	Mazg nucleotide pyrophosphohydrolase
CHN56_RS13975	COG1611	Belongs to the LOG family
CHN56_RS13980	COG0477	Major facilitator Superfamily
CHN56_RS13980	COG2814	Major facilitator Superfamily
CHN56_RS13985	COG2828	Protein conserved in bacteria
CHN56_RS13990	COG0583	DNA-binding transcription factor activity
CHN56_RS14000	COG1609	Transcriptional regulator
CHN56_RS14005	COG2223	nitrite transmembrane transporter activity
CHN56_RS14080	COG3479	Phenolic acid decarboxylase
CHN56_RS14085	COG0456	acetyltransferase
CHN56_RS14090	COG2364	Membrane
CHN56_RS14095	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CHN56_RS14105	COG2272	Belongs to the type-B carboxylesterase lipase family
CHN56_RS14110	COG1396	sequence-specific DNA binding
CHN56_RS14115	COG3944	biosynthesis protein
CHN56_RS14120	COG0489	protein tyrosine kinase activity
CHN56_RS14125	COG1086	Polysaccharide biosynthesis protein
CHN56_RS14130	COG0438	transferase activity, transferring glycosyl groups
CHN56_RS14135	COG1215	transferase activity, transferring glycosyl groups
CHN56_RS14140	COG0438	transferase activity, transferring glycosyl groups
CHN56_RS14150	COG1216	Glycosyl transferase, family 2
CHN56_RS14155	COG5039	Polysaccharide pyruvyl transferase
CHN56_RS14160	COG1216	Glycosyl transferase, family 2
CHN56_RS14165	COG2244	polysaccharide biosynthetic process
CHN56_RS14170	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CHN56_RS14175	COG0110	maltose O-acetyltransferase activity
CHN56_RS14180	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CHN56_RS14185	COG5039	Polysaccharide pyruvyl transferase
CHN56_RS14195	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CHN56_RS14200	COG1620	l-lactate permease
CHN56_RS14205	COG2186	Transcriptional regulator
CHN56_RS14210	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CHN56_RS14235	COG1070	Carbohydrate kinase
CHN56_RS14240	COG1737	Transcriptional regulator
CHN56_RS14245	COG0561	phosphatase activity
CHN56_RS14255	COG1609	Transcriptional regulator
CHN56_RS14265	COG1113	amino acid transport
CHN56_RS14270	COG0697	spore germination
CHN56_RS14275	COG0583	DNA-binding transcription factor activity
CHN56_RS14285	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CHN56_RS14290	COG1609	Transcriptional regulator
CHN56_RS14295	COG2814	Major facilitator Superfamily
CHN56_RS14300	COG2390	Transcriptional regulator
CHN56_RS14305	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CHN56_RS14315	COG0126	phosphoglycerate kinase activity
CHN56_RS14335	COG2234	aminopeptidase activity
CHN56_RS14345	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CHN56_RS14350	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CHN56_RS14355	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CHN56_RS14370	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CHN56_RS14385	COG0456	acetyltransferase
CHN56_RS14390	COG4640	response to antibiotic
CHN56_RS14395	COG3064	Membrane
CHN56_RS14400	COG2095	MarC family integral membrane protein
CHN56_RS14405	COG1510	regulation of RNA biosynthetic process
CHN56_RS14410	COG0517	IMP dehydrogenase activity
CHN56_RS14410	COG1125	glycine betaine transport
CHN56_RS14415	COG1174	glycine betaine transport
CHN56_RS14420	COG1732	Glycine betaine
CHN56_RS14425	COG1174	glycine betaine transport
CHN56_RS14430	COG1510	regulation of RNA biosynthetic process
CHN56_RS14435	COG1125	glycine betaine transport
CHN56_RS14435	COG0517	IMP dehydrogenase activity
CHN56_RS14440	COG1174	glycine betaine transport
CHN56_RS14445	COG1732	Glycine betaine
CHN56_RS14450	COG1174	glycine betaine transport
CHN56_RS14455	COG1131	(ABC) transporter
CHN56_RS14480	COG1733	regulation of RNA biosynthetic process
CHN56_RS14485	COG1396	sequence-specific DNA binding
CHN56_RS14490	COG1396	sequence-specific DNA binding
CHN56_RS14495	COG1476	TRANSCRIPTIONal
CHN56_RS14500	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CHN56_RS14505	COG1647	Serine aminopeptidase, S33
CHN56_RS14510	COG0557	exoribonuclease II activity
CHN56_RS14525	COG2732	(Barnase) inhibitor
CHN56_RS14540	COG2732	(Barnase) inhibitor
CHN56_RS14545	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS14550	COG0583	DNA-binding transcription factor activity
CHN56_RS14555	COG0454	-acetyltransferase
CHN56_RS14560	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CHN56_RS14565	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CHN56_RS14570	COG0765	amino acid transport
CHN56_RS14575	COG0765	amino acid transport
CHN56_RS14580	COG1126	abc transporter atp-binding protein
CHN56_RS14585	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CHN56_RS14590	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CHN56_RS14595	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CHN56_RS14605	COG0673	inositol 2-dehydrogenase activity
CHN56_RS14610	COG1937	Protein conserved in bacteria
CHN56_RS14615	COG2608	mercury ion transmembrane transporter activity
CHN56_RS14620	COG2217	Heavy metal translocating P-type atpase
CHN56_RS14625	COG2217	Heavy metal translocating P-type atpase
CHN56_RS14630	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CHN56_RS14635	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
CHN56_RS14645	COG2860	membrane
CHN56_RS14650	COG3973	AAA domain
CHN56_RS14655	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CHN56_RS14680	COG0656	L-ascorbic acid biosynthetic process
CHN56_RS14685	COG0842	Transport permease protein
CHN56_RS14695	COG1131	(ABC) transporter
CHN56_RS14700	COG3850	Histidine kinase
CHN56_RS14705	COG2197	response regulator
CHN56_RS14710	COG4149	molybdate abc transporter
CHN56_RS14715	COG0725	ABC transporter, periplasmic molybdate-binding protein
CHN56_RS14720	COG1910	domain protein
CHN56_RS14730	COG1988	membrane-bound metal-dependent
CHN56_RS14745	COG0531	amino acid
CHN56_RS14750	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
CHN56_RS14755	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CHN56_RS14760	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CHN56_RS14765	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CHN56_RS14770	COG1120	ATPase activity
CHN56_RS14780	COG2140	Oxalate decarboxylase
CHN56_RS14790	COG1191	sigma factor activity
CHN56_RS14800	COG0745	RESPONSE REGULATOR receiver
CHN56_RS14805	COG2205	protein histidine kinase activity
CHN56_RS14810	COG3386	PFAM SMP-30 Gluconolaconase
CHN56_RS14815	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS14820	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CHN56_RS14825	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CHN56_RS14830	COG1120	ATPase activity
CHN56_RS14835	COG2096	Adenosyltransferase
CHN56_RS14840	COG2814	Major facilitator Superfamily
CHN56_RS14845	COG4758	membrane
CHN56_RS14850	COG1842	Phage shock protein A
CHN56_RS14855	COG3595	metallopeptidase activity
CHN56_RS14860	COG4758	membrane
CHN56_RS14865	COG4585	Histidine kinase
CHN56_RS14870	COG2197	response regulator
CHN56_RS14880	COG0814	amino acid
CHN56_RS14885	COG0697	spore germination
CHN56_RS14895	COG0114	fumarate hydratase activity
CHN56_RS14900	COG1309	transcriptional regulator
CHN56_RS14910	COG2205	protein histidine kinase activity
CHN56_RS14910	COG2770	Histidine kinase
CHN56_RS14915	COG0745	RESPONSE REGULATOR receiver
CHN56_RS14920	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CHN56_RS14925	COG0783	Belongs to the Dps family
CHN56_RS14945	COG1120	ATPase activity
CHN56_RS14970	COG0477	Major facilitator Superfamily
CHN56_RS14975	COG1846	Transcriptional regulator
CHN56_RS14980	COG5577	PFAM Coat F domain
CHN56_RS15000	COG1024	Enoyl-CoA hydratase
CHN56_RS15000	COG1250	3-hydroxyacyl-CoA dehydrogenase
CHN56_RS15005	COG0183	Belongs to the thiolase family
CHN56_RS15010	COG1960	acyl-CoA dehydrogenase activity
CHN56_RS15015	COG1393	Belongs to the ArsC family
CHN56_RS15030	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CHN56_RS15035	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CHN56_RS15045	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CHN56_RS15050	COG2011	ABC-type metal ion transport system permease component
CHN56_RS15055	COG1464	Belongs to the NlpA lipoprotein family
CHN56_RS15060	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CHN56_RS15070	COG0396	ATPase activity
CHN56_RS15075	COG0719	Fe-S assembly protein
CHN56_RS15080	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CHN56_RS15085	COG0822	iron-sulfur transferase activity
CHN56_RS15090	COG0719	Fe-S assembly protein
CHN56_RS15095	COG3409	Peptidoglycan-binding domain 1 protein
CHN56_RS15105	COG2226	methyltransferase
CHN56_RS15110	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CHN56_RS15115	COG0322	excinuclease ABC activity
CHN56_RS15140	COG0789	Transcriptional regulator
CHN56_RS15145	COG2222	sugar isomerase
CHN56_RS15150	COG1653	transport
CHN56_RS15155	COG1175	transmembrane transport
CHN56_RS15160	COG0395	ABC-type sugar transport system, permease component
CHN56_RS15165	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CHN56_RS15170	COG2188	Transcriptional regulator
CHN56_RS15175	COG3842	ATPase activity
CHN56_RS15180	COG2356	endonuclease I
CHN56_RS15185	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CHN56_RS15190	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CHN56_RS15195	COG2814	Major facilitator Superfamily
CHN56_RS15225	COG2508	Transcriptional regulator
CHN56_RS15240	COG1801	Protein of unknown function DUF72
CHN56_RS15245	COG0730	response to heat
CHN56_RS15250	COG0737	Belongs to the 5'-nucleotidase family
CHN56_RS15260	COG0739	heme binding
CHN56_RS15275	COG4470	Protein conserved in bacteria
CHN56_RS15280	COG2445	Protein of unknown function DUF86
CHN56_RS15285	COG0647	UMP catabolic process
CHN56_RS15290	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CHN56_RS15295	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CHN56_RS15300	COG0460	homoserine dehydrogenase
CHN56_RS15305	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CHN56_RS15315	COG0823	Involved in the tonB-independent uptake of proteins
CHN56_RS15315	COG4946	Tricorn protease homolog
CHN56_RS15315	COG1506	peptidase
CHN56_RS15320	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CHN56_RS15325	COG4837	Protein of unknown function (DUF1462)
CHN56_RS15330	COG1252	NADH dehydrogenase
CHN56_RS15340	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CHN56_RS15350	COG0316	Belongs to the HesB IscA family
CHN56_RS15355	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
CHN56_RS15360	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CHN56_RS15380	COG1131	(ABC) transporter
CHN56_RS15410	COG1252	NADH dehydrogenase
CHN56_RS15420	COG3584	3D domain protein
CHN56_RS15425	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
CHN56_RS15435	COG2056	Na+-H+ antiporter family
CHN56_RS15440	COG1268	BioY protein
CHN56_RS15445	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CHN56_RS15450	COG2819	hydrolase of the alpha beta superfamily
CHN56_RS15455	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS15460	COG1169	isochorismate synthase
CHN56_RS15465	COG1021	2,3-dihydroxybenzoate-AMP ligase
CHN56_RS15470	COG1535	isochorismatase
CHN56_RS15470	COG3433	isochorismatase activity
CHN56_RS15475	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS15480	COG3251	PFAM MbtH domain protein
CHN56_RS15485	COG5634	Uncharacterized conserved protein (DUF2278)
CHN56_RS15490	COG0686	Belongs to the AlaDH PNT family
CHN56_RS15495	COG2508	Transcriptional regulator
CHN56_RS15495	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
CHN56_RS15500	COG4842	Belongs to the WXG100 family
CHN56_RS15505	COG5417	Belongs to the EsaB family
CHN56_RS15510	COG4499	WXG100 protein secretion system (Wss), protein YukC
CHN56_RS15515	COG1674	ftsk spoiiie
CHN56_RS15515	COG0433	COG0433 Predicted ATPase
CHN56_RS15520	COG1511	domain protein
CHN56_RS15530	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS15535	COG1418	mRNA catabolic process
CHN56_RS15545	COG0628	permease
CHN56_RS15560	COG5506	Protein of unknown function (DUF1694)
CHN56_RS15565	COG1335	isochorismatase
CHN56_RS15570	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CHN56_RS15575	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
CHN56_RS15595	COG0142	geranyltranstransferase activity
CHN56_RS15605	COG4585	Histidine kinase
CHN56_RS15610	COG2197	response regulator
CHN56_RS15615	COG2050	protein possibly involved in aromatic compounds catabolism
CHN56_RS15620	COG1320	monovalent cation:proton antiporter activity
CHN56_RS15625	COG2212	antiporter activity
CHN56_RS15630	COG1863	multisubunit Na H antiporter MnhE subunit
CHN56_RS15635	COG0651	ATP synthesis coupled electron transport
CHN56_RS15640	COG1006	Multisubunit Na H antiporter MnhC subunit
CHN56_RS15645	COG2111	Na H antiporter
CHN56_RS15650	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CHN56_RS15650	COG2111	Na H antiporter
CHN56_RS15660	COG1079	Belongs to the binding-protein-dependent transport system permease family
CHN56_RS15665	COG4603	Belongs to the binding-protein-dependent transport system permease family
CHN56_RS15670	COG3845	ABC transporter
CHN56_RS15675	COG1744	ABC transporter substrate-binding protein PnrA-like
CHN56_RS15680	COG4565	transcriptional regulatory protein
CHN56_RS15685	COG3290	protein histidine kinase activity
CHN56_RS15695	COG3011	Protein conserved in bacteria
CHN56_RS15700	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CHN56_RS15705	COG2814	Major facilitator Superfamily
CHN56_RS15710	COG5018	Exonuclease
CHN56_RS15720	COG2205	protein histidine kinase activity
CHN56_RS15725	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CHN56_RS15735	COG2267	carboxylic ester hydrolase activity
CHN56_RS15740	COG1522	sequence-specific DNA binding
CHN56_RS15745	COG0436	Aminotransferase
CHN56_RS15750	COG1098	S1 RNA binding domain
CHN56_RS15755	COG2155	Conserved Protein
CHN56_RS15760	COG1979	alcohol dehydrogenase
CHN56_RS15765	COG1979	alcohol dehydrogenase
CHN56_RS15775	COG1335	isochorismatase
CHN56_RS15800	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CHN56_RS15815	COG2738	Putative neutral zinc metallopeptidase
CHN56_RS15820	COG1253	flavin adenine dinucleotide binding
CHN56_RS15825	COG0366	Alpha amylase catalytic
CHN56_RS15830	COG0432	Pfam Uncharacterised protein family UPF0047
CHN56_RS15835	COG2070	2-Nitropropane dioxygenase
CHN56_RS15850	COG0840	transmembrane signaling receptor activity
CHN56_RS15855	COG0840	transmembrane signaling receptor activity
CHN56_RS15860	COG0840	transmembrane signaling receptor activity
CHN56_RS15865	COG0840	transmembrane signaling receptor activity
CHN56_RS15870	COG0693	protein deglycase activity
CHN56_RS15875	COG0673	inositol 2-dehydrogenase activity
CHN56_RS15880	COG0628	permease
CHN56_RS15895	COG4974	Belongs to the 'phage' integrase family
CHN56_RS15945	COG1484	DNA-dependent DNA replication
CHN56_RS15970	COG3655	Transcriptional regulator
CHN56_RS16010	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CHN56_RS16010	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CHN56_RS16030	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CHN56_RS16065	COG1780	Probably involved in ribonucleotide reductase function
CHN56_RS16070	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CHN56_RS16080	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CHN56_RS16085	COG0756	dUTP diphosphatase activity
CHN56_RS16095	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
CHN56_RS16100	COG3583	domain protein
CHN56_RS16100	COG3584	3D domain protein
CHN56_RS16150	COG1793	dna ligase
CHN56_RS16180	COG5434	Belongs to the glycosyl hydrolase 28 family
CHN56_RS16180	COG3420	alginic acid biosynthetic process
CHN56_RS16185	COG4195	phage-related replication protein
CHN56_RS16195	COG1216	Glycosyl transferase, family 2
CHN56_RS16265	COG0740	serine-type endopeptidase activity
CHN56_RS16310	COG3953	SLT domain
CHN56_RS16310	COG5280	Phage tail tape measure protein TP901
CHN56_RS16325	COG5434	Belongs to the glycosyl hydrolase 28 family
CHN56_RS16350	COG5632	N-Acetylmuramoyl-L-alanine amidase
CHN56_RS16350	COG3409	Peptidoglycan-binding domain 1 protein
CHN56_RS16350	COG1388	LysM domain
CHN56_RS16390	COG0457	Tetratricopeptide repeat
CHN56_RS16410	COG1017	nitric oxide dioxygenase activity
CHN56_RS16410	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CHN56_RS16415	COG1705	Flagellar rod assembly protein muramidase FlgJ
CHN56_RS16420	COG0569	domain protein
CHN56_RS16430	COG1510	regulation of RNA biosynthetic process
CHN56_RS16435	COG1012	belongs to the aldehyde dehydrogenase family
CHN56_RS16440	COG1454	alcohol dehydrogenase
CHN56_RS16450	COG2318	DinB family
CHN56_RS16455	COG1585	Membrane protein implicated in regulation of membrane protease activity
CHN56_RS16460	COG2268	Band 7 protein
CHN56_RS16465	COG3859	Proton-coupled thiamine transporter YuaJ
CHN56_RS16590	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
CHN56_RS16595	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CHN56_RS16600	COG1169	isochorismate synthase
CHN56_RS16610	COG0596	Alpha beta hydrolase
CHN56_RS16615	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CHN56_RS16625	COG4948	Mandelate Racemase Muconate Lactonizing
CHN56_RS16640	COG1294	oxidase, subunit
CHN56_RS16645	COG1271	oxidase subunit
CHN56_RS16655	COG0288	reversible hydration of carbon dioxide
CHN56_RS16680	COG0783	Belongs to the Dps family
CHN56_RS16685	COG4824	toxin secretion phage lysis holin
CHN56_RS16690	COG0494	nUDIX hydrolase
CHN56_RS16695	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CHN56_RS16700	COG1116	anion transmembrane transporter activity
CHN56_RS16705	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CHN56_RS16710	COG1506	peptidase
CHN56_RS16730	COG0367	asparagine synthase
CHN56_RS16735	COG1113	amino acid transport
CHN56_RS16740	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CHN56_RS16745	COG2267	carboxylic ester hydrolase activity
CHN56_RS16755	COG0584	glycerophosphoryl diester phosphodiesterase
CHN56_RS16765	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CHN56_RS16770	COG1242	4 iron, 4 sulfur cluster binding
CHN56_RS16780	COG1725	Transcriptional regulator
CHN56_RS16785	COG1131	(ABC) transporter
CHN56_RS16805	COG1136	(ABC) transporter
CHN56_RS16810	COG0577	efflux transmembrane transporter activity
CHN56_RS16815	COG0745	RESPONSE REGULATOR receiver
CHN56_RS16820	COG2205	protein histidine kinase activity
CHN56_RS16825	COG1136	(ABC) transporter
CHN56_RS16830	COG0577	efflux transmembrane transporter activity
CHN56_RS16835	COG5522	Integral membrane protein (intg_mem_TP0381)
CHN56_RS16840	COG2814	Major facilitator Superfamily
CHN56_RS16845	COG2202	Pas domain
CHN56_RS16845	COG1366	Belongs to the anti-sigma-factor antagonist family
CHN56_RS16860	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CHN56_RS16870	COG1486	melibiose metabolic process
CHN56_RS16875	COG0395	ABC-type sugar transport system, permease component
CHN56_RS16880	COG1175	transmembrane transport
CHN56_RS16885	COG1653	transport
CHN56_RS16890	COG1609	Transcriptional regulator
CHN56_RS16900	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CHN56_RS16905	COG2081	HI0933 family
CHN56_RS16910	COG2244	polysaccharide biosynthetic process
CHN56_RS16915	COG1187	pseudouridine synthase activity
CHN56_RS16920	COG1349	DNA-binding transcription factor activity
CHN56_RS16925	COG1131	(ABC) transporter
CHN56_RS16930	COG4473	ABC transporter
CHN56_RS16935	COG2252	PERMEase
CHN56_RS16940	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CHN56_RS16945	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CHN56_RS16950	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
CHN56_RS16960	COG1597	lipid kinase activity
CHN56_RS16965	COG0510	thiamine kinase activity
CHN56_RS16980	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CHN56_RS16985	COG0281	malic enzyme
CHN56_RS16990	COG5584	Small secreted protein
CHN56_RS16995	COG1363	Peptidase, m42
CHN56_RS17005	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CHN56_RS17015	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CHN56_RS17020	COG1674	ftsk spoiiie
CHN56_RS17030	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
CHN56_RS17035	COG4980	gas vesicle protein
CHN56_RS17040	COG3118	belongs to the thioredoxin family
CHN56_RS17045	COG1605	Chorismate mutase
CHN56_RS17045	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
CHN56_RS17050	COG1609	Transcriptional regulator
CHN56_RS17055	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CHN56_RS17060	COG1360	Flagellar Motor Protein
CHN56_RS17065	COG0123	including yeast histone deacetylase and acetoin utilization protein
CHN56_RS17070	COG0517	IMP dehydrogenase activity
CHN56_RS17075	COG0454	-acetyltransferase
CHN56_RS17080	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CHN56_RS17105	COG1378	Sugar-specific transcriptional regulator TrmB
CHN56_RS17110	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CHN56_RS17125	COG0693	protein deglycase activity
CHN56_RS17135	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CHN56_RS17135	COG1017	nitric oxide dioxygenase activity
CHN56_RS17185	COG4282	regulation of fungal-type cell wall biogenesis
CHN56_RS17200	COG2199	diguanylate cyclase activity
CHN56_RS17200	COG2203	Gaf domain
CHN56_RS17205	COG1956	GAF domain-containing protein
CHN56_RS17210	COG1309	transcriptional regulator
CHN56_RS17215	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CHN56_RS17225	COG1114	Component of the transport system for branched-chain amino acids
CHN56_RS17230	COG1104	cysteine desulfurase activity
CHN56_RS17245	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CHN56_RS17250	COG1574	metal-dependent hydrolase with the TIM-barrel fold
CHN56_RS17255	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CHN56_RS17260	COG0616	signal peptide processing
CHN56_RS17265	COG1714	RDD family
CHN56_RS17275	COG3874	Sporulation protein YtfJ
CHN56_RS17280	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CHN56_RS17285	COG0827	DNA restriction-modification system
CHN56_RS17295	COG0521	Mo-molybdopterin cofactor biosynthetic process
CHN56_RS17315	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS17325	COG4109	DRTGG domain
CHN56_RS17335	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
CHN56_RS17355	COG0587	DNA-directed DNA polymerase activity
CHN56_RS17360	COG0281	malic enzyme
CHN56_RS17380	COG0469	pyruvate kinase activity
CHN56_RS17385	COG3030	protein affecting phage T7 exclusion by the F plasmid
CHN56_RS17390	COG0628	permease
CHN56_RS17415	COG0372	Belongs to the citrate synthase family
CHN56_RS17420	COG0538	isocitrate dehydrogenase activity
CHN56_RS17430	COG0745	RESPONSE REGULATOR receiver
CHN56_RS17435	COG5002	protein histidine kinase activity
CHN56_RS17440	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CHN56_RS17440	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CHN56_RS17445	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CHN56_RS17450	COG1971	Probably functions as a manganese efflux pump
CHN56_RS17455	COG0237	dephospho-CoA kinase activity
CHN56_RS17460	COG0656	L-ascorbic acid biosynthetic process
CHN56_RS17465	COG2814	Major facilitator Superfamily
CHN56_RS17470	COG1733	regulation of RNA biosynthetic process
CHN56_RS17475	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CHN56_RS17490	COG3611	Membrane attachment protein
CHN56_RS17495	COG1484	DNA-dependent DNA replication
CHN56_RS17500	COG0398	Pfam SNARE associated Golgi protein
CHN56_RS17515	COG1011	Hydrolase
CHN56_RS17520	COG3275	phosphorelay sensor kinase activity
CHN56_RS17525	COG3279	Response regulator of the LytR AlgR family
CHN56_RS17530	COG1380	Effector of murein hydrolase LrgA
CHN56_RS17535	COG1346	cytolysis
CHN56_RS17540	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CHN56_RS17550	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CHN56_RS17555	COG3326	Membrane
CHN56_RS17565	COG1363	Peptidase, m42
CHN56_RS17570	COG3507	Belongs to the glycosyl hydrolase 43 family
CHN56_RS17575	COG2160	L-arabinose isomerase activity
CHN56_RS17580	COG1069	ribulokinase activity
CHN56_RS17585	COG0235	Class ii aldolase
CHN56_RS17590	COG0647	UMP catabolic process
CHN56_RS17600	COG1653	transport
CHN56_RS17605	COG1175	transmembrane transport
CHN56_RS17610	COG0395	ABC-type sugar transport system, permease component
CHN56_RS17615	COG3534	alpha-L-arabinofuranosidase
CHN56_RS17620	COG1966	Carbon starvation protein
CHN56_RS17625	COG0247	lactate metabolic process
CHN56_RS17630	COG0277	FAD linked oxidase domain protein
CHN56_RS17635	COG3835	regulator
CHN56_RS17645	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CHN56_RS17650	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CHN56_RS17655	COG0072	phenylalanine-tRNA ligase activity
CHN56_RS17655	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CHN56_RS17670	COG1286	toxin biosynthetic process
CHN56_RS17675	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CHN56_RS17675	COG1796	DNA polymerase
CHN56_RS17685	COG3766	membrane
CHN56_RS17695	COG0318	PFAM AMP-dependent synthetase and ligase
CHN56_RS17700	COG1309	transcriptional regulator
CHN56_RS17705	COG1024	Enoyl-CoA hydratase
CHN56_RS17710	COG2086	electron transfer activity
CHN56_RS17715	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CHN56_RS17720	COG3534	alpha-L-arabinofuranosidase
CHN56_RS17725	COG3118	belongs to the thioredoxin family
CHN56_RS17740	COG0527	aspartate kinase activity
CHN56_RS17745	COG1719	4-vinyl reductase, 4VR
CHN56_RS17750	COG2009	succinate dehydrogenase
CHN56_RS17755	COG1053	succinate dehydrogenase
CHN56_RS17760	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CHN56_RS17765	COG0824	Thioesterase
CHN56_RS17770	COG2197	response regulator
CHN56_RS17775	COG1846	Transcriptional regulator
CHN56_RS17785	COG5401	PFAM Sporulation and spore germination
CHN56_RS17795	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CHN56_RS17800	COG0622	Phosphoesterase
CHN56_RS17825	COG0028	Belongs to the TPP enzyme family
CHN56_RS17830	COG0440	acetolactate synthase activity
CHN56_RS17845	COG0473	3-isopropylmalate dehydrogenase activity
CHN56_RS17860	COG0457	Tetratricopeptide repeat
CHN56_RS17860	COG1477	protein flavinylation
CHN56_RS17875	COG1067	ATP-dependent peptidase activity
CHN56_RS17875	COG0470	DNA polymerase III
CHN56_RS17880	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CHN56_RS17900	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CHN56_RS17910	COG1587	Uroporphyrinogen-III synthase
CHN56_RS17915	COG0113	porphobilinogen synthase activity
CHN56_RS17925	COG1388	LysM domain
CHN56_RS17930	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CHN56_RS17940	COG0525	valine-tRNA ligase activity
CHN56_RS17945	COG0285	dihydrofolate synthase activity
CHN56_RS17950	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CHN56_RS17970	COG1077	Cell shape determining protein MreB Mrl
CHN56_RS17980	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
CHN56_RS17990	COG2894	cell division
CHN56_RS17995	COG0739	heme binding
CHN56_RS18000	COG1994	Peptidase M50
CHN56_RS18010	COG2868	ribosomal protein
CHN56_RS18015	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CHN56_RS18020	COG3290	protein histidine kinase activity
CHN56_RS18035	COG0077	Prephenate dehydratase
CHN56_RS18040	COG1827	regulation of RNA biosynthetic process
CHN56_RS18045	COG1104	cysteine desulfurase activity
CHN56_RS18050	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CHN56_RS18055	COG0157	Belongs to the NadC ModD family
CHN56_RS18065	COG1388	LysM domain
CHN56_RS18110	COG1862	Preprotein translocase
CHN56_RS18120	COG2323	membrane
CHN56_RS18125	COG2244	polysaccharide biosynthetic process
CHN56_RS18135	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CHN56_RS18135	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CHN56_RS18140	COG0490	domain, Protein
CHN56_RS18145	COG5416	Lipopolysaccharide assembly protein A domain
CHN56_RS18150	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CHN56_RS18150	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
CHN56_RS18160	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CHN56_RS18170	COG0860	N-Acetylmuramoyl-L-alanine amidase
CHN56_RS18170	COG3103	Sh3 type 3 domain protein
CHN56_RS18170	COG4991	sh3 domain protein
CHN56_RS18195	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CHN56_RS18200	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CHN56_RS18205	COG1959	2 iron, 2 sulfur cluster binding
CHN56_RS18210	COG1104	cysteine desulfurase activity
CHN56_RS18220	COG0457	Tetratricopeptide repeat
CHN56_RS18225	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CHN56_RS18230	COG3881	PFAM PRC-barrel domain
CHN56_RS18245	COG0765	amino acid transport
CHN56_RS18250	COG0765	amino acid transport
CHN56_RS18255	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CHN56_RS18260	COG1126	abc transporter atp-binding protein
CHN56_RS18265	COG0628	permease
CHN56_RS18290	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CHN56_RS18295	COG4122	O-methyltransferase activity
CHN56_RS18300	COG0826	peptidase U32
CHN56_RS18305	COG0826	peptidase U32
CHN56_RS18320	COG0768	penicillin binding
CHN56_RS18345	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CHN56_RS18350	COG0626	cystathionine gamma-synthase activity
CHN56_RS18360	COG2427	Protein of unknown function (DUF1641)
CHN56_RS18365	COG3383	formate dehydrogenase (NAD+) activity
CHN56_RS18370	COG5609	conserved protein (DUF2294)
CHN56_RS18375	COG2116	formate transmembrane transporter activity
CHN56_RS18390	COG2226	methyltransferase
CHN56_RS18395	COG1309	transcriptional regulator
CHN56_RS18400	COG2124	cytochrome p450
CHN56_RS18400	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CHN56_RS18405	COG2814	Major facilitator Superfamily
CHN56_RS18410	COG0583	DNA-binding transcription factor activity
CHN56_RS18415	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CHN56_RS18425	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CHN56_RS18425	COG3711	transcriptional antiterminator
CHN56_RS18430	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CHN56_RS18430	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CHN56_RS18430	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CHN56_RS18435	COG1482	cell wall glycoprotein biosynthetic process
CHN56_RS18445	COG0561	phosphatase activity
CHN56_RS18450	COG0561	phosphatase activity
CHN56_RS18460	COG2318	DinB family
CHN56_RS18465	COG0456	acetyltransferase
CHN56_RS18470	COG2814	Major facilitator Superfamily
CHN56_RS18480	COG0563	adenylate kinase activity
CHN56_RS18525	COG0656	L-ascorbic acid biosynthetic process
CHN56_RS18530	COG1733	regulation of RNA biosynthetic process
CHN56_RS18545	COG1794	racemase activity, acting on amino acids and derivatives
CHN56_RS18570	COG0398	Pfam SNARE associated Golgi protein
CHN56_RS18580	COG2755	lipolytic protein G-D-S-L family
CHN56_RS18590	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
CHN56_RS18595	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CHN56_RS18600	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CHN56_RS18605	COG1534	Rna-binding protein
CHN56_RS18615	COG1713	HD superfamily hydrolase involved in NAD metabolism
CHN56_RS18620	COG0799	negative regulation of ribosome biogenesis
CHN56_RS18625	COG2226	methyltransferase
CHN56_RS18630	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CHN56_RS18635	COG1555	photosystem II stabilization
CHN56_RS18635	COG1596	polysaccharide export
CHN56_RS18640	COG2131	deaminase
CHN56_RS18645	COG0658	competence protein
CHN56_RS18645	COG2333	competence protein COMEC
CHN56_RS18655	COG1466	dna polymerase III delta subunit
CHN56_RS18670	COG0860	N-Acetylmuramoyl-L-alanine amidase
CHN56_RS18685	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CHN56_RS18715	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CHN56_RS18720	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CHN56_RS18725	COG1283	sodium-dependent phosphate transmembrane transporter activity
CHN56_RS18735	COG1610	YqeY-like protein
CHN56_RS18740	COG1030	water channel activity
CHN56_RS18745	COG4864	UPF0365 protein
CHN56_RS18760	COG0561	phosphatase activity
CHN56_RS18765	COG1702	phosphate starvation-inducible protein PhoH
CHN56_RS18770	COG1480	7TM receptor with intracellular HD hydrolase
CHN56_RS18780	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CHN56_RS18785	COG0295	cytidine deaminase activity
CHN56_RS18790	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CHN56_RS18810	COG0751	glycine-tRNA ligase activity
CHN56_RS18815	COG0517	IMP dehydrogenase activity
CHN56_RS18830	COG0358	DNA primase activity
CHN56_RS18835	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CHN56_RS18840	COG2010	Cytochrome c
CHN56_RS18845	COG2384	SAM-dependent methyltransferase
CHN56_RS18850	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CHN56_RS18865	COG0513	Belongs to the DEAD box helicase family
CHN56_RS18880	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CHN56_RS18885	COG0735	belongs to the Fur family
CHN56_RS18890	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
CHN56_RS18895	COG4709	membrane
CHN56_RS18905	COG1388	LysM domain
CHN56_RS18910	COG5521	maltodextrose utilization protein MalA
CHN56_RS18915	COG2839	Protein conserved in bacteria
CHN56_RS18920	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CHN56_RS18925	COG0477	Major facilitator Superfamily
CHN56_RS18930	COG0768	penicillin binding
CHN56_RS18935	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CHN56_RS18940	COG0573	inorganic phosphate transmembrane transporter activity
CHN56_RS18945	COG0581	inorganic phosphate transmembrane transporter activity
CHN56_RS18950	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CHN56_RS18955	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CHN56_RS18960	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CHN56_RS18975	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CHN56_RS18985	COG1757	Na H antiporter
CHN56_RS18990	COG4483	Protein conserved in bacteria
CHN56_RS18995	COG1940	carbohydrate kinase activity
CHN56_RS19000	COG2866	Carboxypeptidase
CHN56_RS19010	COG0011	TIGRFAM Protein of
CHN56_RS19020	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CHN56_RS19030	COG1393	Belongs to the ArsC family
CHN56_RS19040	COG1366	Belongs to the anti-sigma-factor antagonist family
CHN56_RS19045	COG1253	flavin adenine dinucleotide binding
CHN56_RS19050	COG0598	Magnesium transport protein CorA
CHN56_RS19055	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CHN56_RS19060	COG1459	type II secretion system
CHN56_RS19065	COG4537	Required for transformation and DNA binding
CHN56_RS19070	COG4970	Tfp pilus assembly protein FimT
CHN56_RS19080	COG4940	Competence protein ComGF
CHN56_RS19105	COG0681	Belongs to the peptidase S26 family
CHN56_RS19115	COG1396	sequence-specific DNA binding
CHN56_RS19130	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CHN56_RS19150	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CHN56_RS19165	COG1752	Esterase of the alpha-beta hydrolase superfamily
CHN56_RS19175	COG3872	metal-dependent enzyme
CHN56_RS19185	COG0006	proline dipeptidase activity
CHN56_RS19200	COG3854	ATPases associated with a variety of cellular activities
CHN56_RS19240	COG0511	ligase activity, forming carbon-carbon bonds
CHN56_RS19245	COG0439	Biotin carboxylase
CHN56_RS19250	COG1302	Protein conserved in bacteria
CHN56_RS19265	COG1570	exodeoxyribonuclease VII activity
CHN56_RS19275	COG0142	geranyltranstransferase activity
CHN56_RS19285	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
CHN56_RS19295	COG0497	DNA recombination
CHN56_RS19300	COG0750	zinc metalloprotease
CHN56_RS19305	COG0745	RESPONSE REGULATOR receiver
CHN56_RS19345	COG1484	DNA-dependent DNA replication
CHN56_RS19375	COG3655	Transcriptional regulator
CHN56_RS19415	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CHN56_RS19415	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CHN56_RS19435	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CHN56_RS19475	COG1780	Probably involved in ribonucleotide reductase function
CHN56_RS19485	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CHN56_RS19495	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CHN56_RS19500	COG0756	dUTP diphosphatase activity
CHN56_RS19510	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
CHN56_RS19515	COG3583	domain protein
CHN56_RS19515	COG3584	3D domain protein
CHN56_RS19545	COG1595	DNA-templated transcription, initiation
CHN56_RS19560	COG1793	dna ligase
CHN56_RS19605	COG0582	viral genome integration into host DNA
CHN56_RS19700	COG1705	Flagellar rod assembly protein muramidase FlgJ
CHN56_RS19710	COG5434	Belongs to the glycosyl hydrolase 28 family
CHN56_RS19735	COG5632	N-Acetylmuramoyl-L-alanine amidase
CHN56_RS19735	COG3409	Peptidoglycan-binding domain 1 protein
CHN56_RS19735	COG1388	LysM domain
CHN56_RS19765	COG4974	Belongs to the 'phage' integrase family
CHN56_RS19775	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CHN56_RS19790	COG1902	pentaerythritol trinitrate reductase activity
CHN56_RS19810	COG0860	N-Acetylmuramoyl-L-alanine amidase
CHN56_RS19815	COG0584	glycerophosphoryl diester phosphodiesterase
CHN56_RS19820	COG0183	Belongs to the thiolase family
CHN56_RS19825	COG1250	3-hydroxyacyl-CoA dehydrogenase
CHN56_RS19830	COG1960	acyl-CoA dehydrogenase activity
CHN56_RS19835	COG0372	Belongs to the citrate synthase family
CHN56_RS19840	COG2079	MmgE PrpD family protein
CHN56_RS19845	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CHN56_RS19855	COG3290	protein histidine kinase activity
CHN56_RS19855	COG3829	transcription factor binding
CHN56_RS19860	COG0280	phosphate acetyltransferase
CHN56_RS19865	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CHN56_RS19870	COG3426	butyrate kinase activity
CHN56_RS19875	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CHN56_RS19880	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CHN56_RS19885	COG0022	dehydrogenase e1 component
CHN56_RS19890	COG0508	dehydrogenase complex catalyzes the overall conversion of
CHN56_RS19895	COG1597	lipid kinase activity
CHN56_RS19905	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CHN56_RS19910	COG0765	amino acid transport
CHN56_RS19915	COG1126	abc transporter atp-binding protein
CHN56_RS19920	COG4129	membrane
CHN56_RS19925	COG1376	ErfK ybiS ycfS ynhG family protein
CHN56_RS19930	COG0346	lactoylglutathione lyase activity
CHN56_RS19935	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CHN56_RS19940	COG2195	Cleaves the N-terminal amino acid of tripeptides
CHN56_RS19945	COG0706	membrane insertase activity
CHN56_RS19960	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CHN56_RS19965	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CHN56_RS19980	COG0596	Alpha beta hydrolase
CHN56_RS20005	COG0250	Participates in transcription elongation, termination and antitermination
CHN56_RS20015	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CHN56_RS20015	COG2070	2-Nitropropane dioxygenase
CHN56_RS20030	COG0318	PFAM AMP-dependent synthetase and ligase
CHN56_RS20035	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS20040	COG3321	synthase
CHN56_RS20040	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS20040	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS20040	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CHN56_RS20040	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CHN56_RS20045	COG0300	oxidoreductase activity
CHN56_RS20045	COG0318	PFAM AMP-dependent synthetase and ligase
CHN56_RS20045	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS20045	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS20045	COG3321	synthase
CHN56_RS20050	COG3321	synthase
CHN56_RS20050	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS20050	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS20050	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CHN56_RS20050	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CHN56_RS20055	COG0318	PFAM AMP-dependent synthetase and ligase
CHN56_RS20055	COG3321	synthase
CHN56_RS20055	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS20055	COG0300	oxidoreductase activity
CHN56_RS20055	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS20060	COG0300	oxidoreductase activity
CHN56_RS20060	COG3321	synthase
CHN56_RS20060	COG0318	PFAM AMP-dependent synthetase and ligase
CHN56_RS20060	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS20060	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS20065	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CHN56_RS20065	COG3321	synthase
CHN56_RS20065	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS20065	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS20065	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CHN56_RS20070	COG3321	synthase
CHN56_RS20070	COG1028	Short-chain dehydrogenase reductase Sdr
CHN56_RS20070	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CHN56_RS20070	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CHN56_RS20070	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CHN56_RS20075	COG2124	cytochrome p450
CHN56_RS20080	COG3425	synthase
CHN56_RS20085	COG1024	Enoyl-CoA hydratase
CHN56_RS20090	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CHN56_RS20095	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CHN56_RS20100	COG0300	oxidoreductase activity
CHN56_RS20105	COG3048	D-serine ammonia-lyase activity
CHN56_RS20115	COG0346	lactoylglutathione lyase activity
CHN56_RS20125	COG0628	permease
CHN56_RS20140	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CHN56_RS20145	COG0456	acetyltransferase
CHN56_RS20150	COG2329	Antibiotic biosynthesis monooxygenase
CHN56_RS20155	COG0456	acetyltransferase
CHN56_RS20155	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CHN56_RS20160	COG4918	Iron-sulphur cluster biosynthesis
CHN56_RS20170	COG1073	alpha beta
CHN56_RS20180	COG0667	Aldo Keto reductase
CHN56_RS20190	COG0494	nUDIX hydrolase
CHN56_RS20195	COG1379	DNA repair
CHN56_RS20200	COG1396	sequence-specific DNA binding
CHN56_RS20205	COG0252	asparaginase activity
CHN56_RS20210	COG1027	Aspartate ammonia-lyase
CHN56_RS20215	COG1757	Na H antiporter
CHN56_RS20220	COG0281	malic enzyme
CHN56_RS20235	COG1300	Membrane
CHN56_RS20240	COG0735	belongs to the Fur family
CHN56_RS20250	COG4974	Belongs to the 'phage' integrase family
CHN56_RS20255	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
CHN56_RS20260	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
CHN56_RS20265	COG1686	Belongs to the peptidase S11 family
CHN56_RS20270	COG1366	Belongs to the anti-sigma-factor antagonist family
CHN56_RS20280	COG1191	sigma factor activity
CHN56_RS20300	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CHN56_RS20315	COG0697	spore germination
CHN56_RS20320	COG0019	diaminopimelate decarboxylase activity
CHN56_RS20325	COG4086	secreted protein
CHN56_RS20330	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CHN56_RS20340	COG0681	Belongs to the peptidase S26 family
CHN56_RS20350	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CHN56_RS20350	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CHN56_RS20355	COG0307	riboflavin synthase, alpha
CHN56_RS20370	COG0456	acetyltransferase
CHN56_RS20380	COG1547	Domain of unknown function (DUF309)
CHN56_RS20405	COG1686	Belongs to the peptidase S11 family
CHN56_RS20410	COG2715	membrane protein required for spore maturation
CHN56_RS20415	COG0700	Nucleoside recognition
CHN56_RS20420	COG1187	pseudouridine synthase activity
CHN56_RS20425	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CHN56_RS20430	COG1333	cytochrome c biogenesis protein
CHN56_RS20435	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CHN56_RS20440	COG0745	RESPONSE REGULATOR receiver
CHN56_RS20445	COG5002	protein histidine kinase activity
CHN56_RS20450	COG1595	DNA-templated transcription, initiation
CHN56_RS20460	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CHN56_RS20465	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CHN56_RS20470	COG1141	Ferredoxin
CHN56_RS20475	COG4955	Helix-turn-helix domain
CHN56_RS20480	COG0514	ATP-dependent DNA helicase (RecQ)
CHN56_RS20485	COG1266	CAAX protease self-immunity
CHN56_RS20490	COG1388	LysM domain
CHN56_RS20500	COG1408	metallophosphoesterase
CHN56_RS20505	COG4862	establishment of competence for transformation
CHN56_RS20510	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CHN56_RS20515	COG0492	ferredoxin-NADP+ reductase activity
CHN56_RS20520	COG2339	peptidase activity
CHN56_RS20525	COG3409	Peptidoglycan-binding domain 1 protein
CHN56_RS20525	COG3773	Cell wall hydrolase
CHN56_RS20530	COG2959	enzyme of heme biosynthesis
CHN56_RS20535	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
CHN56_RS20550	COG0539	negative regulation of cytoplasmic translation
CHN56_RS20590	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CHN56_RS20595	COG0776	regulation of translation
CHN56_RS20610	COG0142	geranyltranstransferase activity
CHN56_RS20620	COG0142	geranyltranstransferase activity
CHN56_RS20625	COG0105	UTP biosynthetic process
CHN56_RS20630	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CHN56_RS20645	COG4401	Chorismate mutase type I
CHN56_RS20650	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CHN56_RS20685	COG0287	Prephenate dehydrogenase
CHN56_RS20695	COG0457	Tetratricopeptide repeat
CHN56_RS20710	COG0723	plastoquinol--plastocyanin reductase activity
CHN56_RS20715	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CHN56_RS20720	COG2010	Cytochrome c
CHN56_RS20720	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CHN56_RS20725	COG4347	Protein of unknown function (DUF1405)
CHN56_RS20735	COG2140	Oxalate decarboxylase
CHN56_RS20740	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CHN56_RS20745	COG1694	Mazg nucleotide pyrophosphohydrolase
CHN56_RS20760	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CHN56_RS20765	COG0438	transferase activity, transferring glycosyl groups
CHN56_RS20795	COG1199	ATP-dependent helicase activity
CHN56_RS20795	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CHN56_RS20805	COG5353	protein conserved in bacteria
CHN56_RS20810	COG0436	Aminotransferase
CHN56_RS20820	COG3935	DnaD domain protein
CHN56_RS20825	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CHN56_RS20835	COG4499	WXG100 protein secretion system (Wss), protein YukC
CHN56_RS20835	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CHN56_RS20875	COG0071	Belongs to the small heat shock protein (HSP20) family
CHN56_RS20880	COG2190	(PTS) system
CHN56_RS20885	COG1111	helicase
CHN56_RS20885	COG1205	dead DEAH box helicase
CHN56_RS20890	COG3359	exonuclease
CHN56_RS20915	COG0116	Belongs to the methyltransferase superfamily
CHN56_RS20930	COG1199	ATP-dependent helicase activity
CHN56_RS20935	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CHN56_RS20945	COG2233	PERMEase
CHN56_RS20955	COG1335	isochorismatase
CHN56_RS20980	COG3424	synthase
CHN56_RS20985	COG1755	Isoprenylcysteine carboxyl methyltransferase
CHN56_RS20995	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CHN56_RS21010	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CHN56_RS21020	COG0328	RNA-DNA hybrid ribonuclease activity
CHN56_RS21025	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CHN56_RS21030	COG0328	RNA-DNA hybrid ribonuclease activity
CHN56_RS21050	COG1278	Cold shock
CHN56_RS21055	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CHN56_RS21065	COG0386	Belongs to the glutathione peroxidase family
CHN56_RS21070	COG1418	mRNA catabolic process
CHN56_RS21075	COG1413	lyase activity
CHN56_RS21090	COG2136	Putative SAM-dependent methyltransferase
CHN56_RS21090	COG2521	methyltransferase
CHN56_RS21105	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CHN56_RS21110	COG0204	Acyl-transferase
CHN56_RS21115	COG1272	protein, Hemolysin III
CHN56_RS21120	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CHN56_RS21125	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CHN56_RS21135	COG1999	signal sequence binding
CHN56_RS21140	COG2755	lipolytic protein G-D-S-L family
CHN56_RS21145	COG4698	Protein conserved in bacteria
CHN56_RS21150	COG1846	Transcriptional regulator
CHN56_RS21185	COG1525	nuclease
CHN56_RS21190	COG4282	regulation of fungal-type cell wall biogenesis
CHN56_RS21195	COG5444	nuclease activity
CHN56_RS21220	COG0457	Tetratricopeptide repeat
CHN56_RS21225	COG1388	LysM domain
CHN56_RS21265	COG4641	Protein conserved in bacteria
CHN56_RS21280	COG0463	Glycosyl transferase, family 2
CHN56_RS21285	COG0456	acetyltransferase
CHN56_RS21295	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
CHN56_RS21305	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CHN56_RS21310	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CHN56_RS21315	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CHN56_RS21320	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CHN56_RS21325	COG0456	acetyltransferase
CHN56_RS21330	COG1509	lysine 2,3-aminomutase activity