CLI97_RS00045	SM00481	DNA polymerase alpha chain like domain
CLI97_RS00100	SM00710	Parallel beta-helix repeats
CLI97_RS00180	SM00530	Helix-turn-helix XRE-family like proteins 
CLI97_RS00385	SM00864	Tubulin/FtsZ family, GTPase domain
CLI97_RS00410	SM00411	bacterial (prokaryotic) histone like domain
CLI97_RS00580	SM00710	Parallel beta-helix repeats
CLI97_RS00585	SM00644	CLI97_RS00585
CLI97_RS00610	SM00028	Tetratricopeptide repeats
CLI97_RS00655	SM00860	SMI1 / KNR4 family
CLI97_RS00670	SM00860	SMI1 / KNR4 family
CLI97_RS00675	SM00318	Staphylococcal nuclease homologues
CLI97_RS00675	SM00894	Excalibur calcium-binding domain
CLI97_RS00680	SM00857	Resolvase, N terminal domain
CLI97_RS00700	SM00882	Coenzyme A transferase
CLI97_RS00705	SM00882	Coenzyme A transferase
CLI97_RS00720	SM00871	Bacterial transcription activator, effector binding domain
CLI97_RS00795	SM00028	Tetratricopeptide repeats
CLI97_RS00815	SM00860	SMI1 / KNR4 family
CLI97_RS00825	SM00860	SMI1 / KNR4 family
CLI97_RS00830	SM00318	Staphylococcal nuclease homologues
CLI97_RS00830	SM00894	Excalibur calcium-binding domain
CLI97_RS00865	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS00940	SM00567	E-Z type HEAT repeats
CLI97_RS00940	SM00932	Scaffold protein Nfu/NifU N terminal
CLI97_RS00945	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI97_RS00965	SM00357	Cold shock protein domain
CLI97_RS01005	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CLI97_RS01005	SM00475	5'-3' exonuclease
CLI97_RS01085	SM00491	CLI97_RS01085
CLI97_RS01100	SM00981	CLI97_RS01100
CLI97_RS01130	SM00487	DEAD-like helicases superfamily
CLI97_RS01130	SM00490	helicase superfamily c-terminal domain
CLI97_RS01180	SM00060	Fibronectin type 3 domain
CLI97_RS01190	SM00478	endonuclease III
CLI97_RS01190	SM00525	CLI97_RS01190
CLI97_RS01220	SM00479	CLI97_RS01220
CLI97_RS01220	SM00487	DEAD-like helicases superfamily
CLI97_RS01220	SM00491	CLI97_RS01220
CLI97_RS01260	SM00851	MGS-like domain
CLI97_RS01280	SM00835	Cupin
CLI97_RS01315	SM00914	CLI97_RS01315
CLI97_RS01320	SM00028	Tetratricopeptide repeats
CLI97_RS01385	SM00138	Methyltransferase, chemotaxis proteins 
CLI97_RS01390	SM00562	CLI97_RS01390
CLI97_RS01420	SM00411	bacterial (prokaryotic) histone like domain
CLI97_RS01465	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI97_RS01505	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CLI97_RS01525	SM00257	Lysin motif
CLI97_RS01535	SM00487	DEAD-like helicases superfamily
CLI97_RS01535	SM00490	helicase superfamily c-terminal domain
CLI97_RS01570	SM00091	PAS domain
CLI97_RS01570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI97_RS01570	SM00387	Histidine kinase-like ATPases
CLI97_RS01570	SM00388	His Kinase A (phosphoacceptor) domain
CLI97_RS01575	SM00448	cheY-homologous receiver domain
CLI97_RS01575	SM00862	Transcriptional regulatory protein, C terminal
CLI97_RS01595	SM00363	S4 RNA-binding domain
CLI97_RS01740	SM00387	Histidine kinase-like ATPases
CLI97_RS01750	SM00936	Penicillin-binding protein 5, C-terminal domain 
CLI97_RS01795	SM00919	Malic enzyme, NAD binding domain
CLI97_RS01795	SM01274	CLI97_RS01795
CLI97_RS01810	SM00870	CLI97_RS01810
CLI97_RS01815	SM00530	Helix-turn-helix XRE-family like proteins 
CLI97_RS01920	SM00849	Metallo-beta-lactamase superfamily
CLI97_RS01945	SM00823	Phosphopantetheine attachment site
CLI97_RS01945	SM00825	Beta-ketoacyl synthase
CLI97_RS01945	SM00829	Enoylreductase
CLI97_RS01945	SM01294	CLI97_RS01945
CLI97_RS01950	SM00822	CLI97_RS01950
CLI97_RS01950	SM00825	Beta-ketoacyl synthase
CLI97_RS01950	SM00826	CLI97_RS01950
CLI97_RS01955	SM00822	CLI97_RS01955
CLI97_RS01955	SM00823	Phosphopantetheine attachment site
CLI97_RS01955	SM00825	Beta-ketoacyl synthase
CLI97_RS01955	SM01294	CLI97_RS01955
CLI97_RS01960	SM00822	CLI97_RS01960
CLI97_RS01960	SM00823	Phosphopantetheine attachment site
CLI97_RS01960	SM00825	Beta-ketoacyl synthase
CLI97_RS01960	SM00826	CLI97_RS01960
CLI97_RS01960	SM01294	CLI97_RS01960
CLI97_RS01965	SM00822	CLI97_RS01965
CLI97_RS01965	SM00823	Phosphopantetheine attachment site
CLI97_RS01965	SM00825	Beta-ketoacyl synthase
CLI97_RS01965	SM00826	CLI97_RS01965
CLI97_RS01965	SM01294	CLI97_RS01965
CLI97_RS01970	SM00822	CLI97_RS01970
CLI97_RS01970	SM00823	Phosphopantetheine attachment site
CLI97_RS01970	SM00825	Beta-ketoacyl synthase
CLI97_RS01970	SM01294	CLI97_RS01970
CLI97_RS01975	SM00822	CLI97_RS01975
CLI97_RS01975	SM00823	Phosphopantetheine attachment site
CLI97_RS01975	SM00825	Beta-ketoacyl synthase
CLI97_RS01975	SM00826	CLI97_RS01975
CLI97_RS01975	SM01294	CLI97_RS01975
CLI97_RS02000	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CLI97_RS02010	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CLI97_RS02055	SM01350	CLI97_RS02055
CLI97_RS02100	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS02110	SM00062	Bacterial periplasmic substrate-binding proteins
CLI97_RS02110	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CLI97_RS02120	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CLI97_RS02130	SM00861	Transketolase, pyrimidine binding domain
CLI97_RS02150	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CLI97_RS02160	SM00091	PAS domain
CLI97_RS02160	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS02205	SM00646	CLI97_RS02205
CLI97_RS02220	SM00530	Helix-turn-helix XRE-family like proteins 
CLI97_RS02240	SM01005	Alanine racemase, C-terminal domain
CLI97_RS02260	SM00530	Helix-turn-helix XRE-family like proteins 
CLI97_RS02280	SM00257	Lysin motif
CLI97_RS02280	SM00644	CLI97_RS02280
CLI97_RS02305	SM00710	Parallel beta-helix repeats
CLI97_RS02315	SM00047	Lysozyme subfamily 2
CLI97_RS02425	SM00530	Helix-turn-helix XRE-family like proteins 
CLI97_RS02595	SM00479	CLI97_RS02595
CLI97_RS02600	SM00474	3'-5' exonuclease
CLI97_RS02600	SM00482	DNA polymerase A domain
CLI97_RS02640	SM00530	Helix-turn-helix XRE-family like proteins 
CLI97_RS02645	SM00493	CLI97_RS02645
CLI97_RS02710	SM00448	cheY-homologous receiver domain
CLI97_RS02715	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI97_RS02730	SM00363	S4 RNA-binding domain
CLI97_RS02735	SM00861	Transketolase, pyrimidine binding domain
CLI97_RS02770	SM00878	Biotin carboxylase C-terminal domain
CLI97_RS02815	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS02825	SM00841	Elongation factor P, C-terminal
CLI97_RS02825	SM01185	CLI97_RS02825
CLI97_RS02855	SM00529	Helix-turn-helix diphteria tox regulatory element
CLI97_RS02865	SM00450	Rhodanese Homology Domain
CLI97_RS02885	SM00487	DEAD-like helicases superfamily
CLI97_RS02885	SM00490	helicase superfamily c-terminal domain
CLI97_RS02900	SM00530	Helix-turn-helix XRE-family like proteins 
CLI97_RS02960	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS02970	SM01091	Transporter associated domain
CLI97_RS02995	SM00849	Metallo-beta-lactamase superfamily
CLI97_RS03015	SM00631	CLI97_RS03015
CLI97_RS03060	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS03065	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS03110	SM00257	Lysin motif
CLI97_RS03145	SM00518	AP endonuclease family 2
CLI97_RS03150	SM00487	DEAD-like helicases superfamily
CLI97_RS03150	SM00490	helicase superfamily c-terminal domain
CLI97_RS03185	SM00400	zinc finger
CLI97_RS03185	SM00493	CLI97_RS03185
CLI97_RS03200	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI97_RS03245	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI97_RS03295	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI97_RS03310	SM00271	DnaJ molecular chaperone homology domain
CLI97_RS03330	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI97_RS03335	SM00838	Elongation factor G C-terminus
CLI97_RS03370	SM00849	Metallo-beta-lactamase superfamily
CLI97_RS03380	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CLI97_RS03400	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI97_RS03410	SM01103	CLI97_RS03410
CLI97_RS03495	SM00422	helix_turn_helix, mercury resistance
CLI97_RS03590	SM00849	Metallo-beta-lactamase superfamily
CLI97_RS03645	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CLI97_RS03645	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CLI97_RS03735	SM00732	Likely ribonuclease with RNase H fold.
CLI97_RS03745	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CLI97_RS03755	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS03760	SM00062	Bacterial periplasmic substrate-binding proteins
CLI97_RS03760	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CLI97_RS03790	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS03795	SM00028	Tetratricopeptide repeats
CLI97_RS03815	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS03845	SM00287	Bacterial SH3 domain homologues
CLI97_RS03845	SM00646	CLI97_RS03845
CLI97_RS03855	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI97_RS03855	SM00954	Region found in RelA / SpoT proteins
CLI97_RS03905	SM01323	CLI97_RS03905
CLI97_RS03925	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS03930	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CLI97_RS03950	SM00257	Lysin motif
CLI97_RS03995	SM01317	CLI97_RS03995
CLI97_RS04090	SM00257	Lysin motif
CLI97_RS04100	SM01004	Delta-aminolevulinic acid dehydratase
CLI97_RS04135	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS04135	SM00464	Found in ATP-dependent protease La (LON)
CLI97_RS04140	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS04145	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS04145	SM00994	ClpX C4-type zinc finger
CLI97_RS04145	SM01086	C-terminal, D2-small domain, of ClpB protein
CLI97_RS04170	SM01329	CLI97_RS04170
CLI97_RS04175	SM00917	LeuA allosteric (dimerisation) domain
CLI97_RS04230	SM00909	Sporulation and spore germination
CLI97_RS04240	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS04245	SM00421	helix_turn_helix, Lux Regulon
CLI97_RS04285	SM00465	GIY-YIG type nucleases (URI domain)
CLI97_RS04295	SM00813	Alpha-L-arabinofuranosidase C-terminus
CLI97_RS04300	SM00893	Electron transfer flavoprotein domain
CLI97_RS04305	SM00893	Electron transfer flavoprotein domain
CLI97_RS04335	SM00463	Small MutS-related domain
CLI97_RS04335	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CLI97_RS04335	SM00534	ATPase domain of DNA mismatch repair MUTS family
CLI97_RS04340	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CLI97_RS04340	SM00481	DNA polymerase alpha chain like domain
CLI97_RS04340	SM00483	DNA polymerase X family
CLI97_RS04360	SM00873	B3/4 domain
CLI97_RS04360	SM00874	tRNA synthetase B5 domain
CLI97_RS04360	SM00896	Ferredoxin-fold anticodon binding domain
CLI97_RS04370	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CLI97_RS04400	SM00813	Alpha-L-arabinofuranosidase C-terminus
CLI97_RS04430	SM01007	Class II Aldolase and Adducin N-terminal domain
CLI97_RS04490	SM00448	cheY-homologous receiver domain
CLI97_RS04490	SM00850	LytTr DNA-binding domain
CLI97_RS04495	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CLI97_RS04495	SM00387	Histidine kinase-like ATPases
CLI97_RS04505	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CLI97_RS04520	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS04540	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CLI97_RS04570	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CLI97_RS04570	SM01232	CLI97_RS04570
CLI97_RS04575	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CLI97_RS04575	SM00474	3'-5' exonuclease
CLI97_RS04575	SM00475	5'-3' exonuclease
CLI97_RS04575	SM00482	DNA polymerase A domain
CLI97_RS04580	SM00091	PAS domain
CLI97_RS04580	SM00387	Histidine kinase-like ATPases
CLI97_RS04580	SM00388	His Kinase A (phosphoacceptor) domain
CLI97_RS04585	SM00448	cheY-homologous receiver domain
CLI97_RS04585	SM00862	Transcriptional regulatory protein, C terminal
CLI97_RS04595	SM01329	CLI97_RS04595
CLI97_RS04655	SM00919	Malic enzyme, NAD binding domain
CLI97_RS04655	SM01274	CLI97_RS04655
CLI97_RS04660	SM00481	DNA polymerase alpha chain like domain
CLI97_RS04690	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI97_RS04695	SM00849	Metallo-beta-lactamase superfamily
CLI97_RS04720	SM00852	Probable molybdopterin binding domain
CLI97_RS04780	SM00981	CLI97_RS04780
CLI97_RS04815	SM00267	diguanylate cyclase
CLI97_RS04825	SM00363	S4 RNA-binding domain
CLI97_RS04825	SM01390	CLI97_RS04825
CLI97_RS04830	SM00860	SMI1 / KNR4 family
CLI97_RS04925	SM00363	S4 RNA-binding domain
CLI97_RS04945	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI97_RS04965	SM00354	helix_turn _helix lactose operon repressor
CLI97_RS04970	SM00830	Chorismate mutase type II
CLI97_RS04995	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS04995	SM00843	CLI97_RS04995
CLI97_RS05030	SM00919	Malic enzyme, NAD binding domain
CLI97_RS05030	SM01274	CLI97_RS05030
CLI97_RS05035	SM00849	Metallo-beta-lactamase superfamily
CLI97_RS05055	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CLI97_RS05090	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS05095	SM00420	helix_turn_helix, Deoxyribose operon repressor
CLI97_RS05100	SM00363	S4 RNA-binding domain
CLI97_RS05125	SM00354	helix_turn _helix lactose operon repressor
CLI97_RS05155	SM00450	Rhodanese Homology Domain
CLI97_RS05170	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CLI97_RS05170	SM00091	PAS domain
CLI97_RS05190	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS05195	SM00387	Histidine kinase-like ATPases
CLI97_RS05200	SM00448	cheY-homologous receiver domain
CLI97_RS05200	SM00862	Transcriptional regulatory protein, C terminal
CLI97_RS05210	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS05230	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS05235	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI97_RS05245	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI97_RS05315	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS05355	SM01234	CLI97_RS05355
CLI97_RS05360	SM00947	Carbonic anhydrase
CLI97_RS05390	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CLI97_RS05555	SM00244	prohibitin homologues
CLI97_RS05600	SM00047	Lysozyme subfamily 2
CLI97_RS05610	SM00835	Cupin
CLI97_RS05625	SM00028	Tetratricopeptide repeats
CLI97_RS05665	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI97_RS05665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI97_RS05665	SM00319	Homologues of the ligand binding domain of Tar
CLI97_RS05670	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI97_RS05670	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI97_RS05670	SM00319	Homologues of the ligand binding domain of Tar
CLI97_RS05675	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI97_RS05675	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI97_RS05675	SM00319	Homologues of the ligand binding domain of Tar
CLI97_RS05680	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI97_RS05680	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI97_RS05680	SM00319	Homologues of the ligand binding domain of Tar
CLI97_RS05705	SM00642	Alpha-amylase domain
CLI97_RS05710	SM01091	Transporter associated domain
CLI97_RS05780	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI97_RS05790	SM00344	helix_turn_helix ASNC type
CLI97_RS05810	SM00387	Histidine kinase-like ATPases
CLI97_RS05810	SM00388	His Kinase A (phosphoacceptor) domain
CLI97_RS05815	SM01298	CLI97_RS05815
CLI97_RS05820	SM00479	CLI97_RS05820
CLI97_RS05845	SM00091	PAS domain
CLI97_RS05845	SM00387	Histidine kinase-like ATPases
CLI97_RS05850	SM00448	cheY-homologous receiver domain
CLI97_RS05860	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS05920	SM00421	helix_turn_helix, Lux Regulon
CLI97_RS05920	SM00448	cheY-homologous receiver domain
CLI97_RS05925	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI97_RS05925	SM00387	Histidine kinase-like ATPases
CLI97_RS05955	SM00052	Putative diguanylate phosphodiesterase
CLI97_RS05995	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI97_RS06040	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CLI97_RS06040	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CLI97_RS06050	SM00923	MbtH-like protein
CLI97_RS06055	SM00823	Phosphopantetheine attachment site
CLI97_RS06055	SM00824	Thioesterase
CLI97_RS06075	SM00822	CLI97_RS06075
CLI97_RS06135	SM01240	CLI97_RS06135
CLI97_RS06150	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS06265	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI97_RS06355	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS06360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI97_RS06360	SM00866	CLI97_RS06360
CLI97_RS06390	SM00422	helix_turn_helix, mercury resistance
CLI97_RS06400	SM00752	Horizontally Transferred TransMembrane Domain
CLI97_RS06415	SM00465	GIY-YIG type nucleases (URI domain)
CLI97_RS06460	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS06485	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS06485	SM00930	CLI97_RS06485
CLI97_RS06500	SM00493	CLI97_RS06500
CLI97_RS06555	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS06585	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS06610	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI97_RS06615	SM00448	cheY-homologous receiver domain
CLI97_RS06615	SM00862	Transcriptional regulatory protein, C terminal
CLI97_RS06620	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI97_RS06620	SM00387	Histidine kinase-like ATPases
CLI97_RS06620	SM00388	His Kinase A (phosphoacceptor) domain
CLI97_RS06660	SM00421	helix_turn_helix, Lux Regulon
CLI97_RS06660	SM00448	cheY-homologous receiver domain
CLI97_RS06665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI97_RS06665	SM00387	Histidine kinase-like ATPases
CLI97_RS06700	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS06725	SM00387	Histidine kinase-like ATPases
CLI97_RS06725	SM00388	His Kinase A (phosphoacceptor) domain
CLI97_RS06730	SM00448	cheY-homologous receiver domain
CLI97_RS06730	SM00862	Transcriptional regulatory protein, C terminal
CLI97_RS06750	SM00835	Cupin
CLI97_RS06760	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS06825	SM00421	helix_turn_helix, Lux Regulon
CLI97_RS06825	SM00448	cheY-homologous receiver domain
CLI97_RS06835	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS06950	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS06965	SM00062	Bacterial periplasmic substrate-binding proteins
CLI97_RS06970	SM00062	Bacterial periplasmic substrate-binding proteins
CLI97_RS07020	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI97_RS07020	SM00357	Cold shock protein domain
CLI97_RS07020	SM00955	CLI97_RS07020
CLI97_RS07035	SM00530	Helix-turn-helix XRE-family like proteins 
CLI97_RS07040	SM00530	Helix-turn-helix XRE-family like proteins 
CLI97_RS07045	SM00530	Helix-turn-helix XRE-family like proteins 
CLI97_RS07055	SM00387	Histidine kinase-like ATPases
CLI97_RS07055	SM00388	His Kinase A (phosphoacceptor) domain
CLI97_RS07060	SM00448	cheY-homologous receiver domain
CLI97_RS07060	SM00862	Transcriptional regulatory protein, C terminal
CLI97_RS07075	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS07095	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI97_RS07095	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS07120	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI97_RS07120	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS07195	SM00984	UDP binding domain
CLI97_RS07205	SM01192	CLI97_RS07205
CLI97_RS07205	SM01193	CLI97_RS07205
CLI97_RS07230	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CLI97_RS07245	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI97_RS07280	SM00354	helix_turn _helix lactose operon repressor
CLI97_RS07330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI97_RS07330	SM00895	CLI97_RS07330
CLI97_RS07425	SM00530	Helix-turn-helix XRE-family like proteins 
CLI97_RS07525	SM00640	Glycosyl hydrolases family 32
CLI97_RS07535	SM00354	helix_turn _helix lactose operon repressor
CLI97_RS07575	SM00947	Carbonic anhydrase
CLI97_RS07635	SM00028	Tetratricopeptide repeats
CLI97_RS07640	SM00387	Histidine kinase-like ATPases
CLI97_RS07640	SM00388	His Kinase A (phosphoacceptor) domain
CLI97_RS07645	SM00448	cheY-homologous receiver domain
CLI97_RS07645	SM00862	Transcriptional regulatory protein, C terminal
CLI97_RS07650	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS07730	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI97_RS07730	SM00866	CLI97_RS07730
CLI97_RS07770	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS07775	SM00487	DEAD-like helicases superfamily
CLI97_RS07775	SM00490	helicase superfamily c-terminal domain
CLI97_RS07805	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI97_RS07815	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI97_RS07815	SM00245	tail specific protease
CLI97_RS07820	SM00710	Parallel beta-helix repeats
CLI97_RS07830	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS07850	SM00957	SecA DEAD-like domain
CLI97_RS07850	SM00958	SecA preprotein cross-linking domain
CLI97_RS07935	SM00487	DEAD-like helicases superfamily
CLI97_RS07935	SM00490	helicase superfamily c-terminal domain
CLI97_RS07945	SM00421	helix_turn_helix, Lux Regulon
CLI97_RS07945	SM00448	cheY-homologous receiver domain
CLI97_RS07950	SM00387	Histidine kinase-like ATPases
CLI97_RS07990	SM00984	UDP binding domain
CLI97_RS08010	SM00646	CLI97_RS08010
CLI97_RS08040	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS08075	SM00047	Lysozyme subfamily 2
CLI97_RS08075	SM00287	Bacterial SH3 domain homologues
CLI97_RS08135	SM00854	Bacterial capsule synthesis protein PGA_cap
CLI97_RS08170	SM00354	helix_turn _helix lactose operon repressor
CLI97_RS08185	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS08200	SM00287	Bacterial SH3 domain homologues
CLI97_RS08250	SM00903	Flavin reductase like domain
CLI97_RS08265	SM00344	helix_turn_helix ASNC type
CLI97_RS08335	SM00984	UDP binding domain
CLI97_RS08370	SM00487	DEAD-like helicases superfamily
CLI97_RS08370	SM00490	helicase superfamily c-terminal domain
CLI97_RS08380	SM00420	helix_turn_helix, Deoxyribose operon repressor
CLI97_RS08380	SM01134	CLI97_RS08380
CLI97_RS08410	SM00028	Tetratricopeptide repeats
CLI97_RS08435	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS08465	SM00938	Nitrogen regulatory protein P-II
CLI97_RS08475	SM00014	Acid phosphatase homologues
CLI97_RS08505	SM00155	Phospholipase D. Active site motifs.
CLI97_RS08555	SM00028	Tetratricopeptide repeats
CLI97_RS08560	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI97_RS08575	SM00327	von Willebrand factor (vWF) type A domain
CLI97_RS08580	SM00327	von Willebrand factor (vWF) type A domain
CLI97_RS08615	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS08675	SM00226	Low molecular weight phosphatase family
CLI97_RS08715	SM00937	CLI97_RS08715
CLI97_RS08735	SM00919	Malic enzyme, NAD binding domain
CLI97_RS08735	SM01274	CLI97_RS08735
CLI97_RS08750	SM00357	Cold shock protein domain
CLI97_RS08750	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS08750	SM00959	Rho termination factor, N-terminal domain
CLI97_RS08775	SM00448	cheY-homologous receiver domain
CLI97_RS08800	SM00155	Phospholipase D. Active site motifs.
CLI97_RS08815	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS08820	SM00155	Phospholipase D. Active site motifs.
CLI97_RS08845	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CLI97_RS08860	SM00100	Cyclic nucleotide-monophosphate binding domain
CLI97_RS08860	SM00419	helix_turn_helix, cAMP Regulatory protein
CLI97_RS08870	SM00836	DALR anticodon binding domain
CLI97_RS08870	SM01016	Arginyl tRNA synthetase N terminal dom
CLI97_RS08880	SM00028	Tetratricopeptide repeats
CLI97_RS08910	SM00836	DALR anticodon binding domain
CLI97_RS08910	SM01016	Arginyl tRNA synthetase N terminal dom
CLI97_RS08950	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS08970	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI97_RS08995	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS09110	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CLI97_RS09150	SM00858	CLI97_RS09150
CLI97_RS09195	SM00986	Uracil DNA glycosylase superfamily
CLI97_RS09195	SM00987	UreE urease accessory protein, C-terminal domain 
CLI97_RS09230	SM00640	Glycosyl hydrolases family 32
CLI97_RS09240	SM01061	CAT RNA binding domain
CLI97_RS09385	SM00422	helix_turn_helix, mercury resistance
CLI97_RS09395	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CLI97_RS09425	SM00954	Region found in RelA / SpoT proteins
CLI97_RS09520	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CLI97_RS09565	SM01060	CLI97_RS09565
CLI97_RS09585	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS09590	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS09615	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS09680	SM01060	CLI97_RS09680
CLI97_RS09705	SM00487	DEAD-like helicases superfamily
CLI97_RS09705	SM00490	helicase superfamily c-terminal domain
CLI97_RS09745	SM00656	CLI97_RS09745
CLI97_RS09840	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CLI97_RS09850	SM01133	CLI97_RS09850
CLI97_RS09905	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS09910	SM00387	Histidine kinase-like ATPases
CLI97_RS09915	SM00448	cheY-homologous receiver domain
CLI97_RS09915	SM00862	Transcriptional regulatory protein, C terminal
CLI97_RS09970	SM00420	helix_turn_helix, Deoxyribose operon repressor
CLI97_RS09970	SM01134	CLI97_RS09970
CLI97_RS09985	SM00387	Histidine kinase-like ATPases
CLI97_RS10000	SM00421	helix_turn_helix, Lux Regulon
CLI97_RS10000	SM00448	cheY-homologous receiver domain
CLI97_RS10030	SM00564	beta-propeller repeat
CLI97_RS10040	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CLI97_RS10090	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CLI97_RS10095	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CLI97_RS10180	SM00028	Tetratricopeptide repeats
CLI97_RS10205	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CLI97_RS10210	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS10215	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CLI97_RS10220	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS10240	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI97_RS10240	SM00387	Histidine kinase-like ATPases
CLI97_RS10240	SM00388	His Kinase A (phosphoacceptor) domain
CLI97_RS10250	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI97_RS10255	SM00849	Metallo-beta-lactamase superfamily
CLI97_RS10270	SM00091	PAS domain
CLI97_RS10270	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI97_RS10270	SM00387	Histidine kinase-like ATPases
CLI97_RS10270	SM00388	His Kinase A (phosphoacceptor) domain
CLI97_RS10275	SM00448	cheY-homologous receiver domain
CLI97_RS10275	SM00862	Transcriptional regulatory protein, C terminal
CLI97_RS10305	SM00788	Adenylosuccinate synthetase
CLI97_RS10315	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS10375	SM00267	diguanylate cyclase
CLI97_RS10400	SM01131	CLI97_RS10400
CLI97_RS10415	SM00640	Glycosyl hydrolases family 32
CLI97_RS10420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI97_RS10420	SM00895	CLI97_RS10420
CLI97_RS10445	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS10455	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS10465	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI97_RS10510	SM00354	helix_turn _helix lactose operon repressor
CLI97_RS10525	SM00342	helix_turn_helix, arabinose operon control protein
CLI97_RS10550	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CLI97_RS10575	SM00470	ParB-like nuclease domain
CLI97_RS10585	SM00470	ParB-like nuclease domain
CLI97_RS10595	SM01228	CLI97_RS10595
CLI97_RS10605	SM00393	Putative single-stranded nucleic acids-binding domain
CLI97_RS10605	SM01245	CLI97_RS10605
CLI97_RS10625	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS10625	SM00760	Bacterial dnaA protein helix-turn-helix domain
CLI97_RS10630	SM00480	DNA polymerase III beta subunit
CLI97_RS10650	SM00387	Histidine kinase-like ATPases
CLI97_RS10650	SM00433	TopoisomeraseII
CLI97_RS10655	SM00434	DNA Topoisomerase IV
CLI97_RS10690	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI97_RS10690	SM01240	CLI97_RS10690
CLI97_RS10695	SM00936	Penicillin-binding protein 5, C-terminal domain 
CLI97_RS10735	SM00257	Lysin motif
CLI97_RS10735	SM00636	CLI97_RS10735
CLI97_RS10755	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS10765	SM00493	CLI97_RS10765
CLI97_RS10860	SM00465	GIY-YIG type nucleases (URI domain)
CLI97_RS10870	SM00966	SpoVT / AbrB like domain 
CLI97_RS10885	SM01208	CLI97_RS10885
CLI97_RS10890	SM00493	CLI97_RS10890
CLI97_RS10895	SM00650	Ribosomal RNA adenine dimethylases
CLI97_RS10940	SM01400	CLI97_RS10940
CLI97_RS10960	SM00487	DEAD-like helicases superfamily
CLI97_RS10960	SM00490	helicase superfamily c-terminal domain
CLI97_RS10960	SM00982	CLI97_RS10960
CLI97_RS10960	SM01058	CarD-like/TRCF domain
CLI97_RS10965	SM00966	SpoVT / AbrB like domain 
CLI97_RS10980	SM00363	S4 RNA-binding domain
CLI97_RS11000	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI97_RS11015	SM00331	Sigma factor PP2C-like phosphatases
CLI97_RS11015	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CLI97_RS11025	SM00220	Serine/Threonine protein kinases, catalytic domain
CLI97_RS11030	SM00977	TilS substrate C-terminal domain
CLI97_RS11040	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS11085	SM00905	Dihydroneopterin aldolase
CLI97_RS11095	SM00530	Helix-turn-helix XRE-family like proteins 
CLI97_RS11205	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS11205	SM01086	C-terminal, D2-small domain, of ClpB protein
CLI97_RS11210	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS11220	SM00670	Large family of predicted nucleotide-binding domains
CLI97_RS11245	SM00840	CLI97_RS11245
CLI97_RS11250	SM00535	Ribonuclease III family
CLI97_RS11255	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CLI97_RS11280	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CLI97_RS11280	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CLI97_RS11285	SM00649	Ribosomal protein L11/L12
CLI97_RS11315	SM00663	RNA polymerase I subunit A N-terminus
CLI97_RS11335	SM00838	Elongation factor G C-terminus
CLI97_RS11335	SM00889	Elongation factor G, domain IV
CLI97_RS11350	SM01403	CLI97_RS11350
CLI97_RS11370	SM01382	CLI97_RS11370
CLI97_RS11370	SM01383	CLI97_RS11370
CLI97_RS11385	SM00322	K homology RNA-binding domain
CLI97_RS11405	SM01374	CLI97_RS11405
CLI97_RS11410	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CLI97_RS11475	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI97_RS11495	SM00662	RNA polymerases D
CLI97_RS11505	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS11510	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS11550	SM00646	CLI97_RS11550
CLI97_RS11565	SM01251	CLI97_RS11565
CLI97_RS11645	SM00829	Enoylreductase
CLI97_RS11680	SM00342	helix_turn_helix, arabinose operon control protein
CLI97_RS11775	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS11785	SM00220	Serine/Threonine protein kinases, catalytic domain
CLI97_RS11785	SM01260	CLI97_RS11785
CLI97_RS11810	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS11830	SM00421	helix_turn_helix, Lux Regulon
CLI97_RS11830	SM00448	cheY-homologous receiver domain
CLI97_RS11835	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS11940	SM00530	Helix-turn-helix XRE-family like proteins 
CLI97_RS11975	SM00450	Rhodanese Homology Domain
CLI97_RS12010	SM00387	Histidine kinase-like ATPases
CLI97_RS12015	SM00448	cheY-homologous receiver domain
CLI97_RS12115	SM00870	CLI97_RS12115
CLI97_RS12155	SM00028	Tetratricopeptide repeats
CLI97_RS12165	SM00642	Alpha-amylase domain
CLI97_RS12175	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS12230	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CLI97_RS12235	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI97_RS12235	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS12265	SM00632	CLI97_RS12265
CLI97_RS12265	SM00642	Alpha-amylase domain
CLI97_RS12280	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS12390	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CLI97_RS12435	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CLI97_RS12445	SM00823	Phosphopantetheine attachment site
CLI97_RS12450	SM00823	Phosphopantetheine attachment site
CLI97_RS12455	SM00823	Phosphopantetheine attachment site
CLI97_RS12480	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS12490	SM00062	Bacterial periplasmic substrate-binding proteins
CLI97_RS12525	SM00710	Parallel beta-helix repeats
CLI97_RS12525	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
CLI97_RS12560	SM00062	Bacterial periplasmic substrate-binding proteins
CLI97_RS12570	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS12585	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS12595	SM00448	cheY-homologous receiver domain
CLI97_RS12595	SM00862	Transcriptional regulatory protein, C terminal
CLI97_RS12600	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI97_RS12600	SM00387	Histidine kinase-like ATPases
CLI97_RS12600	SM00388	His Kinase A (phosphoacceptor) domain
CLI97_RS12605	SM00028	Tetratricopeptide repeats
CLI97_RS12635	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS12665	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CLI97_RS12670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI97_RS12705	SM00420	helix_turn_helix, Deoxyribose operon repressor
CLI97_RS12760	SM00796	Allophanate hydrolase subunit 1
CLI97_RS12765	SM00797	Allophanate hydrolase subunit 2
CLI97_RS12770	SM00346	helix_turn_helix isocitrate lyase regulation
CLI97_RS12840	SM00344	helix_turn_helix ASNC type
CLI97_RS12845	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CLI97_RS12845	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CLI97_RS12845	SM00493	CLI97_RS12845
CLI97_RS12855	SM00267	diguanylate cyclase
CLI97_RS13015	SM00091	PAS domain
CLI97_RS13015	SM00387	Histidine kinase-like ATPases
CLI97_RS13020	SM00448	cheY-homologous receiver domain
CLI97_RS13035	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS13085	SM00487	DEAD-like helicases superfamily
CLI97_RS13085	SM00490	helicase superfamily c-terminal domain
CLI97_RS13115	SM01005	Alanine racemase, C-terminal domain
CLI97_RS13140	SM00387	Histidine kinase-like ATPases
CLI97_RS13145	SM00331	Sigma factor PP2C-like phosphatases
CLI97_RS13165	SM00331	Sigma factor PP2C-like phosphatases
CLI97_RS13165	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CLI97_RS13170	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI97_RS13170	SM00732	Likely ribonuclease with RNase H fold.
CLI97_RS13180	SM00731	SprT homologues.
CLI97_RS13255	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS13275	SM00357	Cold shock protein domain
CLI97_RS13280	SM01058	CarD-like/TRCF domain
CLI97_RS13395	SM00829	Enoylreductase
CLI97_RS13400	SM00422	helix_turn_helix, mercury resistance
CLI97_RS13410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI97_RS13430	SM00448	cheY-homologous receiver domain
CLI97_RS13430	SM00862	Transcriptional regulatory protein, C terminal
CLI97_RS13435	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI97_RS13435	SM00387	Histidine kinase-like ATPases
CLI97_RS13435	SM00388	His Kinase A (phosphoacceptor) domain
CLI97_RS13490	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS13515	SM00825	Beta-ketoacyl synthase
CLI97_RS13520	SM00530	Helix-turn-helix XRE-family like proteins 
CLI97_RS13535	SM00422	helix_turn_helix, mercury resistance
CLI97_RS13555	SM01329	CLI97_RS13555
CLI97_RS13560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI97_RS13560	SM00895	CLI97_RS13560
CLI97_RS13595	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI97_RS13595	SM00866	CLI97_RS13595
CLI97_RS13600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI97_RS13600	SM00895	CLI97_RS13600
CLI97_RS13640	SM00829	Enoylreductase
CLI97_RS13715	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS13725	SM00881	CoA binding domain
CLI97_RS13750	SM00883	Chaperonin 10 Kd subunit
CLI97_RS13800	SM00028	Tetratricopeptide repeats
CLI97_RS13800	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS13805	SM00829	Enoylreductase
CLI97_RS13860	SM00829	Enoylreductase
CLI97_RS13910	SM00460	Transglutaminase/protease-like homologues
CLI97_RS13960	SM01001	AIR carboxylase
CLI97_RS13970	SM00998	Adenylosuccinate lyase C-terminus
CLI97_RS13985	SM01211	CLI97_RS13985
CLI97_RS14010	SM00798	AICARFT/IMPCHase bienzyme
CLI97_RS14010	SM00851	MGS-like domain
CLI97_RS14015	SM01209	CLI97_RS14015
CLI97_RS14015	SM01210	CLI97_RS14015
CLI97_RS14060	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CLI97_RS14060	SM00292	breast cancer carboxy-terminal domain
CLI97_RS14060	SM00532	Ligase N family
CLI97_RS14095	SM00845	GatB domain
CLI97_RS14110	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CLI97_RS14120	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS14125	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS14230	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS14250	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS14315	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI97_RS14330	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS14335	SM00422	helix_turn_helix, mercury resistance
CLI97_RS14345	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS14350	SM00487	DEAD-like helicases superfamily
CLI97_RS14350	SM00490	helicase superfamily c-terminal domain
CLI97_RS14360	SM00829	Enoylreductase
CLI97_RS14375	SM00656	CLI97_RS14375
CLI97_RS14400	SM00091	PAS domain
CLI97_RS14400	SM00387	Histidine kinase-like ATPases
CLI97_RS14405	SM00448	cheY-homologous receiver domain
CLI97_RS14420	SM00849	Metallo-beta-lactamase superfamily
CLI97_RS14500	SM00642	Alpha-amylase domain
CLI97_RS14505	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI97_RS14505	SM00866	CLI97_RS14505
CLI97_RS14535	SM00354	helix_turn _helix lactose operon repressor
CLI97_RS14560	SM00226	Low molecular weight phosphatase family
CLI97_RS14625	SM00478	endonuclease III
CLI97_RS14655	SM00861	Transketolase, pyrimidine binding domain
CLI97_RS14670	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS14695	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS14700	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS14760	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS14830	SM00287	Bacterial SH3 domain homologues
CLI97_RS14860	SM00478	endonuclease III
CLI97_RS14860	SM00525	CLI97_RS14860
CLI97_RS14890	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS15060	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS15065	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS15070	SM01060	CLI97_RS15070
CLI97_RS15080	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS15085	SM00062	Bacterial periplasmic substrate-binding proteins
CLI97_RS15110	SM00530	Helix-turn-helix XRE-family like proteins 
CLI97_RS15125	SM00567	E-Z type HEAT repeats
CLI97_RS15160	SM00763	PrkA AAA domain
CLI97_RS15175	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS15205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI97_RS15210	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS15215	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS15225	SM00357	Cold shock protein domain
CLI97_RS15240	SM00267	diguanylate cyclase
CLI97_RS15280	SM00363	S4 RNA-binding domain
CLI97_RS15290	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI97_RS15335	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CLI97_RS15335	SM00387	Histidine kinase-like ATPases
CLI97_RS15340	SM00421	helix_turn_helix, Lux Regulon
CLI97_RS15340	SM00448	cheY-homologous receiver domain
CLI97_RS15360	SM00257	Lysin motif
CLI97_RS15380	SM00098	Alkaline phosphatase homologues
CLI97_RS15385	SM00257	Lysin motif
CLI97_RS15430	SM00563	Phosphate acyltransferases
CLI97_RS15435	SM01091	Transporter associated domain
CLI97_RS15440	SM00422	helix_turn_helix, mercury resistance
CLI97_RS15450	SM00825	Beta-ketoacyl synthase
CLI97_RS15455	SM01091	Transporter associated domain
CLI97_RS15515	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS15520	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS15580	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI97_RS15615	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS15635	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI97_RS15680	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS15710	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS15795	SM00849	Metallo-beta-lactamase superfamily
CLI97_RS15840	SM00855	Phosphoglycerate mutase family
CLI97_RS15860	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI97_RS15875	SM00914	CLI97_RS15875
CLI97_RS15900	SM00894	Excalibur calcium-binding domain
CLI97_RS15940	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS16065	SM00342	helix_turn_helix, arabinose operon control protein
CLI97_RS16070	SM00354	helix_turn _helix lactose operon repressor
CLI97_RS16090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI97_RS16115	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI97_RS16125	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI97_RS16125	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI97_RS16185	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CLI97_RS16205	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CLI97_RS16210	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CLI97_RS16265	SM00825	Beta-ketoacyl synthase
CLI97_RS16275	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS16280	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS16325	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS16330	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS16390	SM01118	CLI97_RS16390
CLI97_RS16400	SM00954	Region found in RelA / SpoT proteins
CLI97_RS16525	SM00849	Metallo-beta-lactamase superfamily
CLI97_RS16535	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS16540	SM00966	SpoVT / AbrB like domain 
CLI97_RS16695	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS16735	SM00420	helix_turn_helix, Deoxyribose operon repressor
CLI97_RS16735	SM01134	CLI97_RS16735
CLI97_RS16775	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CLI97_RS16775	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CLI97_RS16810	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS16845	SM00354	helix_turn _helix lactose operon repressor
CLI97_RS16855	SM00858	CLI97_RS16855
CLI97_RS16870	SM00028	Tetratricopeptide repeats
CLI97_RS16880	SM00257	Lysin motif
CLI97_RS16880	SM00644	CLI97_RS16880
CLI97_RS16900	SM00530	Helix-turn-helix XRE-family like proteins 
CLI97_RS16915	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS17015	SM00257	Lysin motif
CLI97_RS17080	SM00257	Lysin motif
CLI97_RS17080	SM00644	CLI97_RS17080
CLI97_RS17125	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI97_RS17150	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS17165	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CLI97_RS17175	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS17215	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CLI97_RS17230	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS17250	SM00028	Tetratricopeptide repeats
CLI97_RS17265	SM00100	Cyclic nucleotide-monophosphate binding domain
CLI97_RS17290	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS17300	SM00257	Lysin motif
CLI97_RS17300	SM00636	CLI97_RS17300
CLI97_RS17315	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI97_RS17315	SM00924	MgtE intracellular N domain
CLI97_RS17320	SM00422	helix_turn_helix, mercury resistance
CLI97_RS17335	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS17350	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
CLI97_RS17415	SM00091	PAS domain
CLI97_RS17415	SM00387	Histidine kinase-like ATPases
CLI97_RS17415	SM00388	His Kinase A (phosphoacceptor) domain
CLI97_RS17455	SM01007	Class II Aldolase and Adducin N-terminal domain
CLI97_RS17470	SM00387	Histidine kinase-like ATPases
CLI97_RS17470	SM00388	His Kinase A (phosphoacceptor) domain
CLI97_RS17475	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS17490	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS17490	SM01086	C-terminal, D2-small domain, of ClpB protein
CLI97_RS17605	SM00354	helix_turn _helix lactose operon repressor
CLI97_RS17610	SM01061	CAT RNA binding domain
CLI97_RS17640	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI97_RS17640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI97_RS17670	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CLI97_RS17670	SM00091	PAS domain
CLI97_RS17670	SM00387	Histidine kinase-like ATPases
CLI97_RS17670	SM00388	His Kinase A (phosphoacceptor) domain
CLI97_RS17690	SM00260	Two component signalling adaptor domain
CLI97_RS17690	SM00448	cheY-homologous receiver domain
CLI97_RS17705	SM00257	Lysin motif
CLI97_RS17725	SM00052	Putative diguanylate phosphodiesterase
CLI97_RS17815	SM00852	Probable molybdopterin binding domain
CLI97_RS17845	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS17850	SM01066	Carbohydrate binding domain
CLI97_RS17855	SM00420	helix_turn_helix, Deoxyribose operon repressor
CLI97_RS17855	SM01134	CLI97_RS17855
CLI97_RS17880	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS17910	SM00966	SpoVT / AbrB like domain 
CLI97_RS17915	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CLI97_RS17915	SM00091	PAS domain
CLI97_RS17915	SM00387	Histidine kinase-like ATPases
CLI97_RS17915	SM00388	His Kinase A (phosphoacceptor) domain
CLI97_RS17935	SM00849	Metallo-beta-lactamase superfamily
CLI97_RS17975	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CLI97_RS17980	SM00822	CLI97_RS17980
CLI97_RS17980	SM00823	Phosphopantetheine attachment site
CLI97_RS17980	SM00825	Beta-ketoacyl synthase
CLI97_RS17980	SM00826	CLI97_RS17980
CLI97_RS17980	SM01294	CLI97_RS17980
CLI97_RS17985	SM00822	CLI97_RS17985
CLI97_RS17985	SM00823	Phosphopantetheine attachment site
CLI97_RS17985	SM00825	Beta-ketoacyl synthase
CLI97_RS17985	SM00826	CLI97_RS17985
CLI97_RS17990	SM00822	CLI97_RS17990
CLI97_RS17990	SM00823	Phosphopantetheine attachment site
CLI97_RS17990	SM00825	Beta-ketoacyl synthase
CLI97_RS17990	SM01294	CLI97_RS17990
CLI97_RS17995	SM00822	CLI97_RS17995
CLI97_RS17995	SM00823	Phosphopantetheine attachment site
CLI97_RS17995	SM00825	Beta-ketoacyl synthase
CLI97_RS17995	SM01294	CLI97_RS17995
CLI97_RS18000	SM00822	CLI97_RS18000
CLI97_RS18000	SM00823	Phosphopantetheine attachment site
CLI97_RS18000	SM00825	Beta-ketoacyl synthase
CLI97_RS18000	SM01294	CLI97_RS18000
CLI97_RS18005	SM00822	CLI97_RS18005
CLI97_RS18005	SM00823	Phosphopantetheine attachment site
CLI97_RS18005	SM00825	Beta-ketoacyl synthase
CLI97_RS18005	SM01294	CLI97_RS18005
CLI97_RS18010	SM00822	CLI97_RS18010
CLI97_RS18010	SM00823	Phosphopantetheine attachment site
CLI97_RS18010	SM01294	CLI97_RS18010
CLI97_RS18025	SM00861	Transketolase, pyrimidine binding domain
CLI97_RS18125	SM00838	Elongation factor G C-terminus
CLI97_RS18145	SM00670	Large family of predicted nucleotide-binding domains
CLI97_RS18170	SM00878	Biotin carboxylase C-terminal domain
CLI97_RS18215	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI97_RS18325	SM00740	CLI97_RS18325
CLI97_RS18330	SM00740	CLI97_RS18330
CLI97_RS18370	SM00842	Cell division protein FtsA
CLI97_RS18375	SM00864	Tubulin/FtsZ family, GTPase domain
CLI97_RS18375	SM00865	Tubulin/FtsZ family, C-terminal domain
CLI97_RS18400	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS18435	SM00363	S4 RNA-binding domain
CLI97_RS18465	SM00363	S4 RNA-binding domain
CLI97_RS18490	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CLI97_RS18495	SM00851	MGS-like domain
CLI97_RS18495	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CLI97_RS18510	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CLI97_RS18555	SM00642	Alpha-amylase domain
CLI97_RS18565	SM00831	Cation transporter/ATPase, N-terminus
CLI97_RS18580	SM00072	Guanylate kinase homologues.
CLI97_RS18585	SM01409	CLI97_RS18585
CLI97_RS18595	SM00487	DEAD-like helicases superfamily
CLI97_RS18595	SM00490	helicase superfamily c-terminal domain
CLI97_RS18620	SM00331	Sigma factor PP2C-like phosphatases
CLI97_RS18620	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CLI97_RS18625	SM00220	Serine/Threonine protein kinases, catalytic domain
CLI97_RS18625	SM00740	CLI97_RS18625
CLI97_RS18640	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
CLI97_RS18660	SM01120	CLI97_RS18660
CLI97_RS18660	SM01121	CLI97_RS18660
CLI97_RS18675	SM00487	DEAD-like helicases superfamily
CLI97_RS18675	SM00490	helicase superfamily c-terminal domain
CLI97_RS18690	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CLI97_RS18695	SM00822	CLI97_RS18695
CLI97_RS18705	SM00358	Double-stranded RNA binding motif
CLI97_RS18705	SM00535	Ribonuclease III family
CLI97_RS18710	SM00968	SMC proteins Flexible Hinge Domain
CLI97_RS18715	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS18715	SM00962	SRP54-type protein, GTPase domain
CLI97_RS18715	SM00963	SRP54-type protein, helical bundle domain
CLI97_RS18730	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS18730	SM00962	SRP54-type protein, GTPase domain
CLI97_RS18730	SM00963	SRP54-type protein, helical bundle domain
CLI97_RS18790	SM00881	CoA binding domain
CLI97_RS18800	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CLI97_RS18800	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CLI97_RS18800	SM00493	CLI97_RS18800
CLI97_RS18820	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS18820	SM01086	C-terminal, D2-small domain, of ClpB protein
CLI97_RS18860	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS18910	SM00448	cheY-homologous receiver domain
CLI97_RS18945	SM00962	SRP54-type protein, GTPase domain
CLI97_RS18955	SM00448	cheY-homologous receiver domain
CLI97_RS18960	SM00073	Histidine Phosphotransfer domain
CLI97_RS18960	SM00260	Two component signalling adaptor domain
CLI97_RS18960	SM00387	Histidine kinase-like ATPases
CLI97_RS18960	SM01231	CLI97_RS18960
CLI97_RS18965	SM00260	Two component signalling adaptor domain
CLI97_RS19025	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI97_RS19035	SM00479	CLI97_RS19035
CLI97_RS19035	SM00481	DNA polymerase alpha chain like domain
CLI97_RS19045	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI97_RS19045	SM00322	K homology RNA-binding domain
CLI97_RS19080	SM00904	Riboflavin kinase
CLI97_RS19085	SM01387	CLI97_RS19085
CLI97_RS19090	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI97_RS19090	SM00322	K homology RNA-binding domain
CLI97_RS19120	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CLI97_RS19130	SM01130	CLI97_RS19130
CLI97_RS19135	SM00849	Metallo-beta-lactamase superfamily
CLI97_RS19150	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS19150	SM00843	CLI97_RS19150
CLI97_RS19155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI97_RS19155	SM00866	CLI97_RS19155
CLI97_RS19165	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS19200	SM00530	Helix-turn-helix XRE-family like proteins 
CLI97_RS19210	SM00852	Probable molybdopterin binding domain
CLI97_RS19215	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS19225	SM00322	K homology RNA-binding domain
CLI97_RS19225	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI97_RS19240	SM00829	Enoylreductase
CLI97_RS19250	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI97_RS19265	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CLI97_RS19265	SM00534	ATPase domain of DNA mismatch repair MUTS family
CLI97_RS19270	SM00853	MutL C terminal dimerisation domain
CLI97_RS19270	SM01340	CLI97_RS19270
CLI97_RS19285	SM00849	Metallo-beta-lactamase superfamily
CLI97_RS19290	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CLI97_RS19295	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CLI97_RS19300	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CLI97_RS19325	SM00822	CLI97_RS19325
CLI97_RS19325	SM00823	Phosphopantetheine attachment site
CLI97_RS19325	SM00825	Beta-ketoacyl synthase
CLI97_RS19325	SM00826	CLI97_RS19325
CLI97_RS19325	SM01294	CLI97_RS19325
CLI97_RS19330	SM00822	CLI97_RS19330
CLI97_RS19330	SM00823	Phosphopantetheine attachment site
CLI97_RS19330	SM00825	Beta-ketoacyl synthase
CLI97_RS19330	SM00826	CLI97_RS19330
CLI97_RS19330	SM01294	CLI97_RS19330
CLI97_RS19335	SM00822	CLI97_RS19335
CLI97_RS19335	SM00823	Phosphopantetheine attachment site
CLI97_RS19335	SM00825	Beta-ketoacyl synthase
CLI97_RS19335	SM00826	CLI97_RS19335
CLI97_RS19335	SM01294	CLI97_RS19335
CLI97_RS19340	SM00822	CLI97_RS19340
CLI97_RS19340	SM00823	Phosphopantetheine attachment site
CLI97_RS19340	SM00825	Beta-ketoacyl synthase
CLI97_RS19340	SM00826	CLI97_RS19340
CLI97_RS19340	SM01294	CLI97_RS19340
CLI97_RS19345	SM00823	Phosphopantetheine attachment site
CLI97_RS19345	SM00825	Beta-ketoacyl synthase
CLI97_RS19345	SM01294	CLI97_RS19345
CLI97_RS19450	SM00646	CLI97_RS19450
CLI97_RS19460	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS19475	SM00422	helix_turn_helix, mercury resistance
CLI97_RS19480	SM01230	CLI97_RS19480
CLI97_RS19545	SM00829	Enoylreductase
CLI97_RS19595	SM00710	Parallel beta-helix repeats
CLI97_RS19630	SM00257	Lysin motif
CLI97_RS19635	SM00857	Resolvase, N terminal domain
CLI97_RS19645	SM00861	Transketolase, pyrimidine binding domain
CLI97_RS19670	SM00448	cheY-homologous receiver domain
CLI97_RS19740	SM01207	CLI97_RS19740
CLI97_RS19745	SM00881	CoA binding domain
CLI97_RS19750	SM00387	Histidine kinase-like ATPases
CLI97_RS19750	SM00433	TopoisomeraseII
CLI97_RS19755	SM00434	DNA Topoisomerase IV
CLI97_RS19775	SM00829	Enoylreductase
CLI97_RS19795	SM00354	helix_turn _helix lactose operon repressor
CLI97_RS19835	SM01067	Cellulose binding domain
CLI97_RS19860	SM00606	Cellulose Binding Domain Type IV
CLI97_RS19865	SM00823	Phosphopantetheine attachment site
CLI97_RS19865	SM00824	Thioesterase
CLI97_RS19870	SM00823	Phosphopantetheine attachment site
CLI97_RS19875	SM00823	Phosphopantetheine attachment site
CLI97_RS19875	SM00825	Beta-ketoacyl synthase
CLI97_RS19880	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CLI97_RS19885	SM00822	CLI97_RS19885
CLI97_RS19890	SM00882	Coenzyme A transferase
CLI97_RS19895	SM00882	Coenzyme A transferase
CLI97_RS19910	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI97_RS19910	SM00876	Biotin and Thiamin Synthesis associated domain
CLI97_RS19970	SM00878	Biotin carboxylase C-terminal domain
CLI97_RS19995	SM00824	Thioesterase
CLI97_RS20000	SM00823	Phosphopantetheine attachment site
CLI97_RS20005	SM00823	Phosphopantetheine attachment site
CLI97_RS20010	SM00823	Phosphopantetheine attachment site
CLI97_RS20010	SM01294	CLI97_RS20010
CLI97_RS20015	SM00823	Phosphopantetheine attachment site
CLI97_RS20070	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CLI97_RS20075	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CLI97_RS20085	SM00829	Enoylreductase
CLI97_RS20105	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CLI97_RS20120	SM00822	CLI97_RS20120
CLI97_RS20150	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CLI97_RS20160	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI97_RS20170	SM00822	CLI97_RS20170
CLI97_RS20185	SM00342	helix_turn_helix, arabinose operon control protein
CLI97_RS20195	SM00849	Metallo-beta-lactamase superfamily
CLI97_RS20205	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CLI97_RS20240	SM00257	Lysin motif
CLI97_RS20245	SM00341	Helicase and RNase D C-terminal
CLI97_RS20245	SM00487	DEAD-like helicases superfamily
CLI97_RS20245	SM00490	helicase superfamily c-terminal domain
CLI97_RS20245	SM00956	CLI97_RS20245
CLI97_RS20330	SM00849	Metallo-beta-lactamase superfamily
CLI97_RS20340	SM00861	Transketolase, pyrimidine binding domain
CLI97_RS20345	SM00327	von Willebrand factor (vWF) type A domain
CLI97_RS20350	SM00382	ATPases associated with a variety of cellular activities
CLI97_RS20360	SM00257	Lysin motif
CLI97_RS20465	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI97_RS20465	SM00866	CLI97_RS20465
CLI97_RS20470	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI97_RS20470	SM00245	tail specific protease
CLI97_RS20505	SM00014	Acid phosphatase homologues
