CLI98_RS00010	PF01144	Coenzyme A transferase
CLI98_RS00015	PF01144	Coenzyme A transferase
CLI98_RS00020	PF00202	Aminotransferase class-III
CLI98_RS00025	PF06445	GyrI-like small molecule binding domain
CLI98_RS00030	PF09680	CLI98_RS00030
CLI98_RS00035	PF00583	Acetyltransferase (GNAT) family
CLI98_RS00040	PF00535	Glycosyl transferase family 2
CLI98_RS00055	PF12996	CLI98_RS00055
CLI98_RS00055	PF13524	Glycosyl transferases group 1
CLI98_RS00060	PF02333	Phytase
CLI98_RS00065	PF02719	Polysaccharide biosynthesis protein
CLI98_RS00070	PF01641	SelR domain
CLI98_RS00075	PF01625	Peptide methionine sulfoxide reductase
CLI98_RS00080	PF01047	MarR family
CLI98_RS00085	PF09911	CLI98_RS00085
CLI98_RS00090	PF13472	GDSL-like Lipase/Acylhydrolase family
CLI98_RS00095	PF02630	SCO1/SenC
CLI98_RS00100	PF10751	CLI98_RS00100
CLI98_RS00105	PF00291	Pyridoxal-phosphate dependent enzyme
CLI98_RS00105	PF00585	C-terminal regulatory domain of Threonine dehydratase
CLI98_RS00110	PF00158	Sigma-54 interaction domain
CLI98_RS00115	PF03006	CLI98_RS00115
CLI98_RS00125	PF00186	Dihydrofolate reductase
CLI98_RS00130	PF00303	Thymidylate synthase
CLI98_RS00135	PF14005	CLI98_RS00135
CLI98_RS00140	PF04445	Putative SAM-dependent methyltransferase
CLI98_RS00145	PF06491	Disulphide isomerase
CLI98_RS00150	PF00920	Dehydratase family
CLI98_RS00155	PF08712	Scaffold protein Nfu/NifU N terminal
CLI98_RS00155	PF13646	HEAT repeats
CLI98_RS00155	PF13769	CLI98_RS00155
CLI98_RS00160	PF01966	HD domain
CLI98_RS00165	PF00255	Glutathione peroxidase
CLI98_RS00170	PF04204	Homoserine O-succinyltransferase
CLI98_RS00175	PF00534	Glycosyl transferases group 1
CLI98_RS00175	PF06925	CLI98_RS00175
CLI98_RS00180	PF00313	'Cold-shock' DNA-binding domain
CLI98_RS00190	PF10819	CLI98_RS00190
CLI98_RS00195	PF10782	CLI98_RS00195
CLI98_RS00200	PF13456	Reverse transcriptase-like
CLI98_RS00205	PF02592	CLI98_RS00205
CLI98_RS00210	PF13456	Reverse transcriptase-like
CLI98_RS00220	PF01367	5'-3' exonuclease, C-terminal SAM fold
CLI98_RS00220	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
CLI98_RS00230	PF10752	CLI98_RS00230
CLI98_RS00235	PF00350	Dynamin family
CLI98_RS00245	PF04140	Isoprenylcysteine carboxyl methyltransferase (ICMT) family
CLI98_RS00250	PF00195	Chalcone and stilbene synthases, N-terminal domain
CLI98_RS00250	PF02797	Chalcone and stilbene synthases, C-terminal domain
CLI98_RS00255	PF13302	Acetyltransferase (GNAT) domain
CLI98_RS00260	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
CLI98_RS00275	PF00857	Isochorismatase family
CLI98_RS00290	PF00860	Permease family
CLI98_RS00295	PF00156	Phosphoribosyl transferase domain
CLI98_RS00300	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
CLI98_RS00305	PF13307	Helicase C-terminal domain
CLI98_RS00315	PF14139	CLI98_RS00315
CLI98_RS00320	PF01170	Putative RNA methylase family UPF0020
CLI98_RS00320	PF02926	THUMP domain
CLI98_RS00330	PF05103	DivIVA protein
CLI98_RS00335	PF06908	Protein of unknown function (DUF1273)
CLI98_RS00340	PF11122	CLI98_RS00340
CLI98_RS00345	PF13482	RNase_H superfamily
CLI98_RS00350	PF00270	DEAD/DEAH box helicase
CLI98_RS00350	PF00271	Helicase conserved C-terminal domain
CLI98_RS00350	PF09369	CLI98_RS00350
CLI98_RS00355	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CLI98_RS00365	PF14179	CLI98_RS00365
CLI98_RS00370	PF14178	CLI98_RS00370
CLI98_RS00375	PF08807	Bacterial domain of unknown function (DUF1798)
CLI98_RS00380	PF17522	CLI98_RS00380
CLI98_RS00390	PF10720	CLI98_RS00390
CLI98_RS00395	PF03838	Recombination protein U
CLI98_RS00400	PF00905	Penicillin binding protein transpeptidase domain
CLI98_RS00400	PF00912	Transglycosylase
CLI98_RS00410	PF00633	Helix-hairpin-helix motif
CLI98_RS00410	PF00730	HhH-GPD superfamily base excision DNA repair protein
CLI98_RS00415	PF07261	Replication initiation and membrane attachment
CLI98_RS00420	PF00152	tRNA synthetases class II (D, K and N)
CLI98_RS00420	PF01336	OB-fold nucleic acid binding domain
CLI98_RS00425	PF00155	Aminotransferase class I and II
CLI98_RS00435	PF14084	CLI98_RS00435
CLI98_RS00440	PF00929	Exonuclease
CLI98_RS00440	PF04851	Type III restriction enzyme, res subunit
CLI98_RS00440	PF13307	Helicase C-terminal domain
CLI98_RS00445	PF02261	Aspartate decarboxylase
CLI98_RS00450	PF02569	Pantoate-beta-alanine ligase
CLI98_RS00455	PF02548	Ketopantoate hydroxymethyltransferase
CLI98_RS00460	PF02237	Biotin protein ligase C terminal domain
CLI98_RS00460	PF03099	Biotin/lipoate A/B protein ligase family
CLI98_RS00460	PF08279	HTH domain
CLI98_RS00465	PF01743	Poly A polymerase head domain
CLI98_RS00465	PF12627	Probable RNA and SrmB- binding site of polymerase A
CLI98_RS00465	PF13735	tRNA nucleotidyltransferase domain 2 putative
CLI98_RS00470	PF00534	Glycosyl transferases group 1
CLI98_RS00470	PF13439	Glycosyltransferase Family 4
CLI98_RS00475	PF02585	GlcNAc-PI de-N-acetylase
CLI98_RS00480	PF02142	MGS-like domain
CLI98_RS00485	PF01113	Dihydrodipicolinate reductase, N-terminus
CLI98_RS00485	PF05173	Dihydrodipicolinate reductase, C-terminus
CLI98_RS00490	PF03819	MazG nucleotide pyrophosphohydrolase domain
CLI98_RS00495	PF02588	CLI98_RS00495
CLI98_RS00495	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CLI98_RS00500	PF00190	Cupin
CLI98_RS00505	PF09577	CLI98_RS00505
CLI98_RS00510	PF07187	CLI98_RS00510
CLI98_RS00515	PF00032	Cytochrome b(C-terminal)/b6/petD
CLI98_RS00515	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
CLI98_RS00520	PF00033	Cytochrome b(N-terminal)/b6/petB
CLI98_RS00525	PF00355	Rieske [2Fe-2S] domain
CLI98_RS00525	PF08802	Cytochrome B6-F complex Fe-S subunit
CLI98_RS00530	PF10673	CLI98_RS00530
CLI98_RS00535	PF08858	IDEAL domain
CLI98_RS00535	PF08864	UPF0302 domain
CLI98_RS00540	PF13429	Tetratricopeptide repeat
CLI98_RS00540	PF13432	Tetratricopeptide repeat
CLI98_RS00540	PF14559	Tetratricopeptide repeat
CLI98_RS00545	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CLI98_RS00550	PF01842	ACT domain
CLI98_RS00550	PF02153	Prephenate dehydrogenase
CLI98_RS00555	PF00155	Aminotransferase class I and II
CLI98_RS00560	PF00290	Tryptophan synthase alpha chain
CLI98_RS00565	PF00291	Pyridoxal-phosphate dependent enzyme
CLI98_RS00570	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
CLI98_RS00575	PF00218	Indole-3-glycerol phosphate synthase
CLI98_RS00580	PF00591	Glycosyl transferase family, a/b domain
CLI98_RS00580	PF02885	Glycosyl transferase family, helical bundle domain
CLI98_RS00585	PF00425	chorismate binding enzyme
CLI98_RS00585	PF04715	Anthranilate synthase component I, N terminal region
CLI98_RS00590	PF07736	Chorismate mutase type I
CLI98_RS00595	PF01761	3-dehydroquinate synthase
CLI98_RS00600	PF01264	Chorismate synthase
CLI98_RS00605	PF01739	CheR methyltransferase, SAM binding domain
CLI98_RS00605	PF03705	CheR methyltransferase, all-alpha domain
CLI98_RS00610	PF00334	Nucleoside diphosphate kinase
CLI98_RS00615	PF00348	Polyprenyl synthetase
CLI98_RS00620	PF01209	ubiE/COQ5 methyltransferase family
CLI98_RS00625	PF07307	CLI98_RS00625
CLI98_RS00630	PF02081	Tryptophan RNA-binding attenuator protein
CLI98_RS00635	PF01227	GTP cyclohydrolase I
CLI98_RS00640	PF00216	Bacterial DNA-binding protein
CLI98_RS00645	PF09547	CLI98_RS00645
CLI98_RS00655	PF10966	CLI98_RS00655
CLI98_RS00660	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
CLI98_RS00660	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
CLI98_RS00665	PF01926	50S ribosome-binding GTPase
CLI98_RS00665	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
CLI98_RS00675	PF14140	CLI98_RS00675
CLI98_RS00680	PF01070	FMN-dependent dehydrogenase
CLI98_RS00685	PF00575	S1 RNA binding domain
CLI98_RS00690	PF02224	Cytidylate kinase
CLI98_RS00695	PF17313	CLI98_RS00695
CLI98_RS00700	PF07238	PilZ domain
CLI98_RS00700	PF12945	Flagellar protein YcgR
CLI98_RS00705	PF03413	Peptidase propeptide and YPEB domain
CLI98_RS00705	PF14620	CLI98_RS00705
CLI98_RS00710	PF01471	Putative peptidoglycan binding domain
CLI98_RS00710	PF07486	Cell Wall Hydrolase
CLI98_RS00715	PF13367	CLI98_RS00715
CLI98_RS00720	PF13738	Pyridine nucleotide-disulphide oxidoreductase
CLI98_RS00725	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CLI98_RS00725	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
CLI98_RS00730	PF05389	Negative regulator of genetic competence (MecA)
CLI98_RS00735	PF12850	Calcineurin-like phosphoesterase superfamily domain
CLI98_RS00740	PF10864	CLI98_RS00740
CLI98_RS00745	PF01476	LysM domain
CLI98_RS00750	PF02517	CAAX protease self-immunity
CLI98_RS00755	PF00270	DEAD/DEAH box helicase
CLI98_RS00755	PF00271	Helicase conserved C-terminal domain
CLI98_RS00760	PF14493	CLI98_RS00760
CLI98_RS00765	PF13370	4Fe-4S single cluster domain
CLI98_RS00770	PF12822	Protein of unknown function (DUF3816)
CLI98_RS00775	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CLI98_RS00775	PF01842	ACT domain
CLI98_RS00775	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CLI98_RS00785	PF04542	Sigma-70 region 2
CLI98_RS00785	PF08281	Sigma-70, region 4
CLI98_RS00790	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS00790	PF00672	HAMP domain
CLI98_RS00790	PF00989	PAS fold
CLI98_RS00790	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS00795	PF00072	Response regulator receiver domain
CLI98_RS00795	PF00486	Transcriptional regulatory protein, C terminal
CLI98_RS00800	PF01578	CLI98_RS00800
CLI98_RS00805	PF05140	CLI98_RS00805
CLI98_RS00810	PF00578	AhpC/TSA family
CLI98_RS00815	PF00849	RNA pseudouridylate synthase
CLI98_RS00815	PF01479	S4 domain
CLI98_RS00820	PF07670	Nucleoside recognition
CLI98_RS00825	PF07670	Nucleoside recognition
CLI98_RS00830	PF00768	D-alanyl-D-alanine carboxypeptidase
CLI98_RS00830	PF07943	Penicillin-binding protein 5, C-terminal domain
CLI98_RS00835	PF13047	CLI98_RS00835
CLI98_RS00840	PF04079	Putative transcriptional regulators (Ypuh-like)
CLI98_RS00845	PF02616	ScpA/B protein
CLI98_RS00850	PF09680	CLI98_RS00850
CLI98_RS00855	PF03745	Domain of unknown function (DUF309)
CLI98_RS00865	PF00583	Acetyltransferase (GNAT) family
CLI98_RS00870	PF00885	6,7-dimethyl-8-ribityllumazine synthase
CLI98_RS00875	PF00925	GTP cyclohydrolase II
CLI98_RS00875	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
CLI98_RS00880	PF00677	Lumazine binding domain
CLI98_RS00885	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
CLI98_RS00885	PF01872	RibD C-terminal domain
CLI98_RS00895	PF00717	Peptidase S24-like
CLI98_RS00900	PF07301	CLI98_RS00900
CLI98_RS00905	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
CLI98_RS00910	PF06207	CLI98_RS00910
CLI98_RS00915	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
CLI98_RS00915	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
CLI98_RS00920	PF03323	CLI98_RS00920
CLI98_RS00925	PF14097	CLI98_RS00925
CLI98_RS00930	PF03862	CLI98_RS00930
CLI98_RS00935	PF07451	Stage V sporulation protein AD (SpoVAD)
CLI98_RS00940	PF03862	CLI98_RS00940
CLI98_RS00945	PF13782	CLI98_RS00945
CLI98_RS00950	PF12164	Stage V sporulation protein AA
CLI98_RS00955	PF04539	Sigma-70 region 3
CLI98_RS00955	PF04542	Sigma-70 region 2
CLI98_RS00955	PF04545	Sigma-70, region 4
CLI98_RS00960	PF13581	Histidine kinase-like ATPase domain
CLI98_RS00965	PF01740	STAS domain
CLI98_RS00970	PF00768	D-alanyl-D-alanine carboxypeptidase
CLI98_RS00970	PF07943	Penicillin-binding protein 5, C-terminal domain
CLI98_RS00975	PF01048	Phosphorylase superfamily
CLI98_RS00980	PF01676	Metalloenzyme superfamily
CLI98_RS00985	PF00589	Phage integrase family
CLI98_RS00985	PF02899	Phage integrase, N-terminal SAM-like domain
CLI98_RS00990	PF14004	CLI98_RS00990
CLI98_RS00995	PF01475	Ferric uptake regulator family
CLI98_RS01000	PF01944	CLI98_RS01000
CLI98_RS01015	PF00390	Malic enzyme, N-terminal domain
CLI98_RS01015	PF01488	Shikimate / quinate 5-dehydrogenase
CLI98_RS01015	PF03949	Malic enzyme, NAD binding domain
CLI98_RS01020	PF03553	CLI98_RS01020
CLI98_RS01025	PF00206	Lyase
CLI98_RS01025	PF10415	Fumarase C C-terminus
CLI98_RS01030	PF00710	Asparaginase
CLI98_RS01035	PF01381	Helix-turn-helix
CLI98_RS01040	PF13263	PHP-associated
CLI98_RS01045	PF00293	NUDIX domain
CLI98_RS01050	PF13072	CLI98_RS01050
CLI98_RS01055	PF00248	Aldo/keto reductase family
CLI98_RS01060	PF13025	CLI98_RS01060
CLI98_RS01065	PF12146	Putative lysophospholipase
CLI98_RS01070	PF10827	CLI98_RS01070
CLI98_RS01075	PF01521	Iron-sulphur cluster biosynthesis
CLI98_RS01080	PF04229	GrpB protein
CLI98_RS01080	PF13673	Acetyltransferase (GNAT) domain
CLI98_RS01085	PF03992	Antibiotic biosynthesis monooxygenase
CLI98_RS01090	PF00583	Acetyltransferase (GNAT) family
CLI98_RS01095	PF00817	impB/mucB/samB family
CLI98_RS01095	PF11798	IMS family HHH motif
CLI98_RS01095	PF11799	impB/mucB/samB family C-terminal domain
CLI98_RS01100	PF08863	CLI98_RS01100
CLI98_RS01105	PF14164	CLI98_RS01105
CLI98_RS01110	PF01594	CLI98_RS01110
CLI98_RS01115	PF13314	CLI98_RS01115
CLI98_RS01120	PF13669	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CLI98_RS01125	PF00485	Phosphoribulokinase / Uridine kinase family
CLI98_RS01130	PF00291	Pyridoxal-phosphate dependent enzyme
CLI98_RS01135	PF00106	short chain dehydrogenase
CLI98_RS01140	PF00753	Metallo-beta-lactamase superfamily
CLI98_RS01145	PF03807	NADP oxidoreductase coenzyme F420-dependent
CLI98_RS01145	PF14748	Pyrroline-5-carboxylate reductase dimerisation
CLI98_RS01150	PF00378	Enoyl-CoA hydratase/isomerase family
CLI98_RS01155	PF01154	Hydroxymethylglutaryl-coenzyme A synthase N terminal
CLI98_RS01155	PF08540	Hydroxymethylglutaryl-coenzyme A synthase C terminal
CLI98_RS01160	PF00067	Cytochrome P450
CLI98_RS01165	PF00107	Zinc-binding dehydrogenase
CLI98_RS01165	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS01165	PF00550	Phosphopantetheine attachment site
CLI98_RS01165	PF00975	Thioesterase domain
CLI98_RS01165	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS01165	PF08240	Alcohol dehydrogenase GroES-like domain
CLI98_RS01165	PF08242	Methyltransferase domain
CLI98_RS01165	PF16197	CLI98_RS01165
CLI98_RS01170	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS01170	PF00550	Phosphopantetheine attachment site
CLI98_RS01170	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS01170	PF08659	KR domain
CLI98_RS01170	PF14765	Polyketide synthase dehydratase
CLI98_RS01170	PF16197	CLI98_RS01170
CLI98_RS01175	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS01175	PF00550	Phosphopantetheine attachment site
CLI98_RS01175	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS01175	PF08659	KR domain
CLI98_RS01175	PF14765	Polyketide synthase dehydratase
CLI98_RS01175	PF16197	CLI98_RS01175
CLI98_RS01180	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS01180	PF00550	Phosphopantetheine attachment site
CLI98_RS01180	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS01180	PF08242	Methyltransferase domain
CLI98_RS01180	PF08659	KR domain
CLI98_RS01180	PF14765	Polyketide synthase dehydratase
CLI98_RS01180	PF16197	CLI98_RS01180
CLI98_RS01185	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS01185	PF00550	Phosphopantetheine attachment site
CLI98_RS01185	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS01185	PF08659	KR domain
CLI98_RS01185	PF14765	Polyketide synthase dehydratase
CLI98_RS01185	PF16197	CLI98_RS01185
CLI98_RS01190	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS01190	PF00550	Phosphopantetheine attachment site
CLI98_RS01190	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS01190	PF08659	KR domain
CLI98_RS01190	PF14765	Polyketide synthase dehydratase
CLI98_RS01190	PF16197	CLI98_RS01190
CLI98_RS01195	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS01195	PF00550	Phosphopantetheine attachment site
CLI98_RS01195	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS01195	PF08242	Methyltransferase domain
CLI98_RS01195	PF08659	KR domain
CLI98_RS01195	PF14765	Polyketide synthase dehydratase
CLI98_RS01195	PF16197	CLI98_RS01195
CLI98_RS01200	PF13561	Enoyl-(Acyl carrier protein) reductase
CLI98_RS01205	PF00501	AMP-binding enzyme
CLI98_RS01205	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS01220	PF00698	Acyl transferase domain
CLI98_RS01220	PF03060	Nitronate monooxygenase
CLI98_RS01230	PF02357	Transcription termination factor nusG
CLI98_RS01235	PF07883	Cupin domain
CLI98_RS01240	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CLI98_RS01240	PF03466	LysR substrate binding domain
CLI98_RS01245	PF06942	CLI98_RS01245
CLI98_RS01250	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
CLI98_RS01255	PF00561	alpha/beta hydrolase fold
CLI98_RS01260	PF00471	Ribosomal protein L33
CLI98_RS01265	PF12706	Beta-lactamase superfamily domain
CLI98_RS01270	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
CLI98_RS01270	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
CLI98_RS01275	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
CLI98_RS01275	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
CLI98_RS01280	PF00817	impB/mucB/samB family
CLI98_RS01280	PF11798	IMS family HHH motif
CLI98_RS01280	PF11799	impB/mucB/samB family C-terminal domain
CLI98_RS01290	PF02096	60Kd inner membrane protein
CLI98_RS01295	PF01546	Peptidase family M20/M25/M40
CLI98_RS01295	PF07687	Peptidase dimerisation domain
CLI98_RS01300	PF01039	Carboxyl transferase domain
CLI98_RS01305	PF13669	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CLI98_RS01310	PF03734	L,D-transpeptidase catalytic domain
CLI98_RS01315	PF06081	CLI98_RS01315
CLI98_RS01315	PF11728	DUF939 C-terminal domain
CLI98_RS01320	PF00005	ABC transporter
CLI98_RS01325	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS01330	PF00497	Bacterial extracellular solute-binding proteins, family 3
CLI98_RS01335	PF06491	Disulphide isomerase
CLI98_RS01340	PF00781	Diacylglycerol kinase catalytic domain
CLI98_RS01345	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CLI98_RS01345	PF00364	Biotin-requiring enzyme
CLI98_RS01345	PF02817	e3 binding domain
CLI98_RS01350	PF02779	Transketolase, pyrimidine binding domain
CLI98_RS01350	PF02780	Transketolase, C-terminal domain
CLI98_RS01355	PF00676	Dehydrogenase E1 component
CLI98_RS01360	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CLI98_RS01360	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CLI98_RS01365	PF00871	Acetokinase family
CLI98_RS01370	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CLI98_RS01370	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
CLI98_RS01375	PF01515	Phosphate acetyl/butaryl transferase
CLI98_RS01380	PF00158	Sigma-54 interaction domain
CLI98_RS01380	PF00989	PAS fold
CLI98_RS01380	PF02954	Bacterial regulatory protein, Fis family
CLI98_RS01385	PF11118	CLI98_RS01385
CLI98_RS01390	PF13714	Phosphoenolpyruvate phosphomutase
CLI98_RS01395	PF03972	MmgE/PrpD family
CLI98_RS01400	PF00285	Citrate synthase
CLI98_RS01405	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
CLI98_RS01405	PF02770	Acyl-CoA dehydrogenase, middle domain
CLI98_RS01405	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
CLI98_RS01410	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
CLI98_RS01410	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
CLI98_RS01415	PF00108	Thiolase, N-terminal domain
CLI98_RS01415	PF02803	Thiolase, C-terminal domain
CLI98_RS01420	PF03009	Glycerophosphoryl diester phosphodiesterase family
CLI98_RS01425	PF01520	N-acetylmuramoyl-L-alanine amidase
CLI98_RS01435	PF02659	CLI98_RS01435
CLI98_RS01440	PF01381	Helix-turn-helix
CLI98_RS01440	PF06803	CLI98_RS01440
CLI98_RS01445	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
CLI98_RS01450	PF10676	CLI98_RS01450
CLI98_RS01455	PF10676	CLI98_RS01455
CLI98_RS01460	PF00842	Alanine racemase, C-terminal domain
CLI98_RS01460	PF01168	Alanine racemase, N-terminal domain
CLI98_RS01465	PF00072	Response regulator receiver domain
CLI98_RS01465	PF08769	Sporulation initiation factor Spo0A C terminal
CLI98_RS01470	PF05580	CLI98_RS01470
CLI98_RS01470	PF13180	PDZ domain
CLI98_RS01475	PF13476	AAA domain
CLI98_RS01480	PF01316	Arginine repressor, DNA binding domain
CLI98_RS01480	PF02863	Arginine repressor, C-terminal domain
CLI98_RS01485	PF01479	S4 domain
CLI98_RS01485	PF01728	FtsJ-like methyltransferase
CLI98_RS01490	PF02779	Transketolase, pyrimidine binding domain
CLI98_RS01490	PF02780	Transketolase, C-terminal domain
CLI98_RS01490	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
CLI98_RS01495	PF00348	Polyprenyl synthetase
CLI98_RS01500	PF02609	Exonuclease VII small subunit
CLI98_RS01505	PF02601	CLI98_RS01505
CLI98_RS01505	PF13742	CLI98_RS01505
CLI98_RS01510	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
CLI98_RS01510	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
CLI98_RS01515	PF01029	NusB family
CLI98_RS01520	PF03780	CLI98_RS01520
CLI98_RS01525	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
CLI98_RS01525	PF02785	Biotin carboxylase C-terminal domain
CLI98_RS01525	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CLI98_RS01530	PF00364	Biotin-requiring enzyme
CLI98_RS01535	PF12685	SpoIIIAH-like protein
CLI98_RS01545	PF09581	CLI98_RS01545
CLI98_RS01550	PF09546	CLI98_RS01550
CLI98_RS01555	PF06686	CLI98_RS01555
CLI98_RS01560	PF06686	CLI98_RS01560
CLI98_RS01565	PF09548	CLI98_RS01565
CLI98_RS01570	PF00004	ATPase family associated with various cellular activities (AAA)
CLI98_RS01575	PF10942	CLI98_RS01575
CLI98_RS01580	PF01132	Elongation factor P (EF-P) OB domain
CLI98_RS01580	PF08207	Elongation factor P (EF-P) KOW-like domain
CLI98_RS01580	PF09285	Elongation factor P, C-terminal
CLI98_RS01585	PF00557	Metallopeptidase family M24
CLI98_RS01585	PF01321	Creatinase/Prolidase N-terminal domain
CLI98_RS01590	PF11085	CLI98_RS01590
CLI98_RS01595	PF07136	CLI98_RS01595
CLI98_RS01605	PF01734	Patatin-like phospholipase
CLI98_RS01610	PF01325	Iron dependent repressor, N-terminal DNA binding domain
CLI98_RS01610	PF02742	Iron dependent repressor, metal binding and dimerisation domain
CLI98_RS01615	PF03099	Biotin/lipoate A/B protein ligase family
CLI98_RS01620	PF00581	Rhodanese-like domain
CLI98_RS01625	PF02347	Glycine cleavage system P-protein
CLI98_RS01630	PF02347	Glycine cleavage system P-protein
CLI98_RS01635	PF01571	Aminomethyltransferase folate-binding domain
CLI98_RS01635	PF08669	Glycine cleavage T-protein C-terminal barrel domain
CLI98_RS01640	PF00176	SNF2 family N-terminal domain
CLI98_RS01640	PF00271	Helicase conserved C-terminal domain
CLI98_RS01645	PF11079	CLI98_RS01645
CLI98_RS01650	PF08671	Anti-repressor SinI
CLI98_RS01655	PF01381	Helix-turn-helix
CLI98_RS01655	PF08671	Anti-repressor SinI
CLI98_RS01660	PF12389	CLI98_RS01660
CLI98_RS01665	PF00717	Peptidase S24-like
CLI98_RS01675	PF13028	Protein of unknown function (DUF3889)
CLI98_RS01680	PF14038	CLI98_RS01680
CLI98_RS01685	PF14173	CLI98_RS01685
CLI98_RS01690	PF15980	CLI98_RS01690
CLI98_RS01700	PF07963	Prokaryotic N-terminal methylation motif
CLI98_RS01705	PF07963	Prokaryotic N-terminal methylation motif
CLI98_RS01710	PF00482	Type II secretion system (T2SS), protein F
CLI98_RS01715	PF00437	Type II/IV secretion system protein
CLI98_RS01720	PF01544	CorA-like Mg2+ transporter protein
CLI98_RS01725	PF00571	CBS domain
CLI98_RS01725	PF01595	CLI98_RS01725
CLI98_RS01725	PF03471	Transporter associated domain
CLI98_RS01730	PF01740	STAS domain
CLI98_RS01740	PF03960	ArsC family
CLI98_RS01745	PF11117	CLI98_RS01745
CLI98_RS01750	PF00753	Metallo-beta-lactamase superfamily
CLI98_RS01755	PF10958	CLI98_RS01755
CLI98_RS01760	PF01910	Domain of unknown function DUF77
CLI98_RS01770	PF00246	Zinc carboxypeptidase
CLI98_RS01775	PF00480	ROK family
CLI98_RS01780	PF06014	Bacterial protein of unknown function (DUF910)
CLI98_RS01785	PF03553	CLI98_RS01785
CLI98_RS01795	PF01812	5-formyltetrahydrofolate cyclo-ligase family
CLI98_RS01800	PF00471	Ribosomal protein L33
CLI98_RS01810	PF02618	YceG-like family
CLI98_RS01815	PF00005	ABC transporter
CLI98_RS01820	PF00005	ABC transporter
CLI98_RS01825	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS01830	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS01835	PF12849	PBP superfamily domain
CLI98_RS01840	PF00905	Penicillin binding protein transpeptidase domain
CLI98_RS01840	PF03717	Penicillin-binding Protein dimerisation domain
CLI98_RS01845	PF07690	Major Facilitator Superfamily
CLI98_RS01850	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
CLI98_RS01850	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
CLI98_RS01855	PF04306	CLI98_RS01855
CLI98_RS01860	PF06691	CLI98_RS01860
CLI98_RS01870	PF04551	GcpE protein
CLI98_RS01885	PF01475	Ferric uptake regulator family
CLI98_RS01890	PF02588	CLI98_RS01890
CLI98_RS01890	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CLI98_RS01895	PF11116	CLI98_RS01895
CLI98_RS01900	PF01261	Xylose isomerase-like TIM barrel
CLI98_RS01905	PF00270	DEAD/DEAH box helicase
CLI98_RS01905	PF00271	Helicase conserved C-terminal domain
CLI98_RS01910	PF14181	CLI98_RS01910
CLI98_RS01915	PF02401	LytB protein
CLI98_RS01920	PF01784	NIF3 (NGG1p interacting factor 3)
CLI98_RS01925	PF04816	Family of unknown function (DUF633)
CLI98_RS01930	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
CLI98_RS01935	PF00140	Sigma-70 factor, region 1
CLI98_RS01935	PF03979	Sigma-70 factor, region 1
CLI98_RS01935	PF04539	Sigma-70 region 3
CLI98_RS01935	PF04542	Sigma-70 region 2
CLI98_RS01935	PF04545	Sigma-70, region 4
CLI98_RS01940	PF01807	CHC2 zinc finger
CLI98_RS01940	PF08275	DNA primase catalytic core, N-terminal domain
CLI98_RS01940	PF10410	DnaB-helicase binding domain of primase
CLI98_RS01940	PF13155	Toprim-like
CLI98_RS01945	PF02639	CLI98_RS01945
CLI98_RS01950	PF03618	CLI98_RS01950
CLI98_RS01955	PF00571	CBS domain
CLI98_RS01955	PF08279	HTH domain
CLI98_RS01960	PF02092	CLI98_RS01960
CLI98_RS01960	PF05746	DALR anticodon binding domain
CLI98_RS01965	PF02091	Glycyl-tRNA synthetase alpha subunit
CLI98_RS01970	PF02565	Recombination protein O C terminal
CLI98_RS01970	PF11967	Recombination protein O N terminal
CLI98_RS01975	PF14006	CLI98_RS01975
CLI98_RS01980	PF01926	50S ribosome-binding GTPase
CLI98_RS01980	PF07650	KH domain
CLI98_RS01985	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
CLI98_RS01990	PF01219	Prokaryotic diacylglycerol kinase
CLI98_RS01995	PF02130	Uncharacterized protein family UPF0054
CLI98_RS02000	PF01966	HD domain
CLI98_RS02000	PF07697	CLI98_RS02000
CLI98_RS02000	PF07698	CLI98_RS02000
CLI98_RS02005	PF02562	PhoH-like protein
CLI98_RS02010	PF06898	CLI98_RS02010
CLI98_RS02015	PF07873	YabP family
CLI98_RS02025	PF12127	CLI98_RS02025
CLI98_RS02030	PF01957	NfeD-like C-terminal, partner-binding
CLI98_RS02030	PF01972	Serine dehydrogenase proteinase
CLI98_RS02035	PF09424	Yqey-like protein
CLI98_RS02040	PF01165	Ribosomal protein S21
CLI98_RS02045	PF02690	CLI98_RS02045
CLI98_RS02050	PF00919	Uncharacterized protein family UPF0004
CLI98_RS02050	PF01938	TRAM domain
CLI98_RS02050	PF04055	Radical SAM superfamily
CLI98_RS02055	PF04452	RNA methyltransferase
CLI98_RS02060	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
CLI98_RS02065	PF00226	DnaJ domain
CLI98_RS02065	PF00684	DnaJ central domain
CLI98_RS02065	PF01556	DnaJ C terminal domain
CLI98_RS02070	PF00012	Hsp70 protein
CLI98_RS02075	PF01025	GrpE
CLI98_RS02080	PF01628	HrcA protein C terminal domain
CLI98_RS02085	PF04055	Radical SAM superfamily
CLI98_RS02085	PF06969	HemN C-terminal domain
CLI98_RS02090	PF00009	Elongation factor Tu GTP binding domain
CLI98_RS02090	PF00679	Elongation factor G C-terminus
CLI98_RS02090	PF03144	Elongation factor Tu domain 2
CLI98_RS02090	PF06421	GTP-binding protein LepA C-terminus
CLI98_RS02095	PF12438	CLI98_RS02095
CLI98_RS02100	PF07454	CLI98_RS02100
CLI98_RS02105	PF03418	Germination protease
CLI98_RS02110	PF01649	Ribosomal protein S20
CLI98_RS02115	PF06144	DNA polymerase III, delta subunit
CLI98_RS02120	PF14141	CLI98_RS02120
CLI98_RS02125	PF00753	Metallo-beta-lactamase superfamily
CLI98_RS02125	PF03772	CLI98_RS02125
CLI98_RS02125	PF13567	CLI98_RS02125
CLI98_RS02130	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
CLI98_RS02135	PF10531	SLBB domain
CLI98_RS02135	PF12836	Helix-hairpin-helix motif
CLI98_RS02140	PF03807	NADP oxidoreductase coenzyme F420-dependent
CLI98_RS02140	PF14748	Pyrroline-5-carboxylate reductase dimerisation
CLI98_RS02145	PF13649	Methyltransferase domain
CLI98_RS02150	PF02410	Oligomerisation domain
CLI98_RS02155	PF01966	HD domain
CLI98_RS02160	PF01467	Cytidylyltransferase
CLI98_RS02165	PF01985	CRS1 / YhbY (CRM) domain
CLI98_RS02170	PF01488	Shikimate / quinate 5-dehydrogenase
CLI98_RS02170	PF08501	Shikimate dehydrogenase substrate binding domain
CLI98_RS02175	PF01926	50S ribosome-binding GTPase
CLI98_RS02180	PF08282	haloacid dehalogenase-like hydrolase
CLI98_RS02180	PF13242	HAD-hyrolase-like
CLI98_RS02185	PF08970	Sporulation inhibitor A
CLI98_RS02190	PF13472	GDSL-like Lipase/Acylhydrolase family
CLI98_RS02195	PF01522	Polysaccharide deacetylase
CLI98_RS02200	PF09335	CLI98_RS02200
CLI98_RS02210	PF07690	Major Facilitator Superfamily
CLI98_RS02215	PF04542	Sigma-70 region 2
CLI98_RS02215	PF04545	Sigma-70, region 4
CLI98_RS02225	PF03629	Domain of unknown function (DUF303)
CLI98_RS02230	PF03551	Transcriptional regulator PadR-like family
CLI98_RS02235	PF06445	GyrI-like small molecule binding domain
CLI98_RS02235	PF12833	Helix-turn-helix domain
CLI98_RS02240	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CLI98_RS02240	PF03466	LysR substrate binding domain
CLI98_RS02245	PF13520	Amino acid permease
CLI98_RS02250	PF06146	CLI98_RS02250
CLI98_RS02255	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS02260	PF00072	Response regulator receiver domain
CLI98_RS02260	PF00486	Transcriptional regulatory protein, C terminal
CLI98_RS02265	PF04235	CLI98_RS02265
CLI98_RS02270	PF00583	Acetyltransferase (GNAT) family
CLI98_RS02285	PF07690	Major Facilitator Superfamily
CLI98_RS02295	PF14568	SMI1-KNR4 cell-wall
CLI98_RS02300	PF04740	CLI98_RS02300
CLI98_RS02300	PF14414	CLI98_RS02300
CLI98_RS02315	PF09954	CLI98_RS02315
CLI98_RS02340	PF00583	Acetyltransferase (GNAT) family
CLI98_RS02345	PF05163	DinB family
CLI98_RS02350	PF10852	CLI98_RS02350
CLI98_RS02355	PF08282	haloacid dehalogenase-like hydrolase
CLI98_RS02360	PF08282	haloacid dehalogenase-like hydrolase
CLI98_RS02365	PF01380	SIS domain
CLI98_RS02365	PF01418	Helix-turn-helix domain, rpiR family
CLI98_RS02370	PF01238	Phosphomannose isomerase type I
CLI98_RS02375	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CLI98_RS02375	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CLI98_RS02375	PF02378	Phosphotransferase system, EIIC
CLI98_RS02380	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CLI98_RS02380	PF00874	PRD domain
CLI98_RS02380	PF05043	Mga helix-turn-helix domain
CLI98_RS02380	PF08279	HTH domain
CLI98_RS02385	PF12706	Beta-lactamase superfamily domain
CLI98_RS02390	PF04073	Aminoacyl-tRNA editing domain
CLI98_RS02395	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CLI98_RS02395	PF03466	LysR substrate binding domain
CLI98_RS02400	PF07690	Major Facilitator Superfamily
CLI98_RS02405	PF00067	Cytochrome P450
CLI98_RS02405	PF00175	Oxidoreductase NAD-binding domain
CLI98_RS02405	PF00258	Flavodoxin
CLI98_RS02405	PF00667	FAD binding domain
CLI98_RS02410	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS02410	PF16295	CLI98_RS02410
CLI98_RS02415	PF08241	Methyltransferase domain
CLI98_RS02420	PF09501	CLI98_RS02420
CLI98_RS02430	PF01226	Formate/nitrite transporter
CLI98_RS02435	PF10057	CLI98_RS02435
CLI98_RS02440	PF00384	Molybdopterin oxidoreductase
CLI98_RS02440	PF01568	Molydopterin dinucleotide binding domain
CLI98_RS02440	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CLI98_RS02440	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CLI98_RS02440	PF12838	4Fe-4S dicluster domain
CLI98_RS02440	PF13510	2Fe-2S iron-sulfur cluster binding domain
CLI98_RS02445	PF07849	CLI98_RS02445
CLI98_RS02450	PF14143	CLI98_RS02450
CLI98_RS02455	PF01053	Cys/Met metabolism PLP-dependent enzyme
CLI98_RS02460	PF00291	Pyridoxal-phosphate dependent enzyme
CLI98_RS02465	PF01048	Phosphorylase superfamily
CLI98_RS02470	PF13649	Methyltransferase domain
CLI98_RS02475	PF10750	CLI98_RS02475
CLI98_RS02480	PF07423	CLI98_RS02480
CLI98_RS02485	PF00905	Penicillin binding protein transpeptidase domain
CLI98_RS02490	PF01272	Transcription elongation factor, GreA/GreB, C-term
CLI98_RS02490	PF03449	Transcription elongation factor, N-terminal
CLI98_RS02495	PF00485	Phosphoribulokinase / Uridine kinase family
CLI98_RS02500	PF01136	CLI98_RS02500
CLI98_RS02500	PF16325	CLI98_RS02500
CLI98_RS02505	PF01136	CLI98_RS02505
CLI98_RS02510	PF01596	O-methyltransferase
CLI98_RS02515	PF02618	YceG-like family
CLI98_RS02520	PF06949	CLI98_RS02520
CLI98_RS02525	PF03652	Uncharacterised protein family (UPF0081)
CLI98_RS02530	PF06135	CLI98_RS02530
CLI98_RS02535	PF01411	tRNA synthetases class II (A)
CLI98_RS02535	PF02272	DHHA1 domain
CLI98_RS02535	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CLI98_RS02540	PF01594	CLI98_RS02540
CLI98_RS02545	PF00005	ABC transporter
CLI98_RS02550	PF00497	Bacterial extracellular solute-binding proteins, family 3
CLI98_RS02555	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS02560	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS02565	PF13056	CLI98_RS02565
CLI98_RS02575	PF05239	PRC-barrel domain
CLI98_RS02580	PF13538	UvrD-like helicase C-terminal domain
CLI98_RS02580	PF13604	AAA domain
CLI98_RS02580	PF14490	Helix-hairpin-helix containing domain
CLI98_RS02585	PF13181	Tetratricopeptide repeat
CLI98_RS02585	PF13414	TPR repeat
CLI98_RS02585	PF13432	Tetratricopeptide repeat
CLI98_RS02590	PF03054	tRNA methyl transferase
CLI98_RS02595	PF00266	Aminotransferase class-V
CLI98_RS02600	PF02082	Transcriptional regulator
CLI98_RS02605	PF03215	Rad17 cell cycle checkpoint protein
CLI98_RS02605	PF05496	Holliday junction DNA helicase ruvB N-terminus
CLI98_RS02605	PF12002	MgsA AAA+ ATPase C terminal
CLI98_RS02605	PF16193	CLI98_RS02605
CLI98_RS02610	PF00899	ThiF family
CLI98_RS02620	PF00152	tRNA synthetases class II (D, K and N)
CLI98_RS02620	PF01336	OB-fold nucleic acid binding domain
CLI98_RS02620	PF02938	GAD domain
CLI98_RS02625	PF03129	Anticodon binding domain
CLI98_RS02625	PF13393	Histidyl-tRNA synthetase
CLI98_RS02630	PF17449	CLI98_RS02630
CLI98_RS02635	PF01520	N-acetylmuramoyl-L-alanine amidase
CLI98_RS02635	PF08239	Bacterial SH3 domain
CLI98_RS02640	PF02580	D-Tyr-tRNA(Tyr) deacylase
CLI98_RS02645	PF02824	TGS domain
CLI98_RS02645	PF04607	Region found in RelA / SpoT proteins
CLI98_RS02645	PF13291	ACT domain
CLI98_RS02645	PF13328	HD domain
CLI98_RS02650	PF00156	Phosphoribosyl transferase domain
CLI98_RS02655	PF01368	DHH family
CLI98_RS02655	PF02272	DHHA1 domain
CLI98_RS02655	PF10141	CLI98_RS02655
CLI98_RS02660	PF06305	CLI98_RS02660
CLI98_RS02665	PF02080	TrkA-C domain
CLI98_RS02670	PF02355	Protein export membrane protein
CLI98_RS02670	PF07549	SecD/SecF GG Motif
CLI98_RS02675	PF13797	CLI98_RS02675
CLI98_RS02680	PF01943	CLI98_RS02680
CLI98_RS02680	PF14667	Polysaccharide biosynthesis C-terminal domain
CLI98_RS02685	PF04239	Protein of unknown function (DUF421)
CLI98_RS02690	PF12670	CLI98_RS02690
CLI98_RS02695	PF02699	Preprotein translocase subunit
CLI98_RS02700	PF01702	Queuine tRNA-ribosyltransferase
CLI98_RS02705	PF02547	Queuosine biosynthesis protein
CLI98_RS02710	PF11146	CLI98_RS02710
CLI98_RS02715	PF05491	Holliday junction DNA helicase ruvB C-terminus
CLI98_RS02715	PF05496	Holliday junction DNA helicase ruvB N-terminus
CLI98_RS02720	PF01330	RuvA N terminal domain
CLI98_RS02720	PF07499	RuvA, C-terminal domain
CLI98_RS02720	PF14520	Helix-hairpin-helix domain
CLI98_RS02725	PF08955	BofC C-terminal domain
CLI98_RS02725	PF08977	Bypass of Forespore C, N terminal
CLI98_RS02735	PF09580	CLI98_RS02735
CLI98_RS02740	PF01476	LysM domain
CLI98_RS02745	PF02445	Quinolinate synthetase A protein
CLI98_RS02750	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
CLI98_RS02750	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
CLI98_RS02755	PF00890	FAD binding domain
CLI98_RS02755	PF02910	Fumarate reductase flavoprotein C-term
CLI98_RS02760	PF00266	Aminotransferase class-V
CLI98_RS02765	PF02829	3H domain
CLI98_RS02765	PF08279	HTH domain
CLI98_RS02770	PF00800	Prephenate dehydratase
CLI98_RS02775	PF01842	ACT domain
CLI98_RS02780	PF01018	GTP1/OBG
CLI98_RS02780	PF01926	50S ribosome-binding GTPase
CLI98_RS02780	PF09269	Domain of unknown function (DUF1967)
CLI98_RS02785	PF14682	Sporulation initiation phospho-transferase B, C-terminal
CLI98_RS02785	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
CLI98_RS02790	PF01016	Ribosomal L27 protein
CLI98_RS02795	PF04327	Protein of unknown function (DUF464)
CLI98_RS02800	PF00829	Ribosomal prokaryotic L21 protein
CLI98_RS02805	PF02163	Peptidase family M50
CLI98_RS02810	PF01551	Peptidase family M23
CLI98_RS02815	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
CLI98_RS02820	PF03775	Septum formation inhibitor MinC, C-terminal domain
CLI98_RS02825	PF04093	CLI98_RS02825
CLI98_RS02830	PF04085	rod shape-determining protein MreC
CLI98_RS02835	PF06723	MreB/Mbl protein
CLI98_RS02840	PF04002	RadC-like JAB domain
CLI98_RS02845	PF02545	Maf-like protein
CLI98_RS02850	PF05036	Sporulation related domain
CLI98_RS02855	PF01478	Type IV leader peptidase family
CLI98_RS02855	PF06750	CLI98_RS02855
CLI98_RS02860	PF02875	Mur ligase family, glutamate ligase domain
CLI98_RS02860	PF08245	Mur ligase middle domain
CLI98_RS02865	PF00133	tRNA synthetases class I (I, L, M and V)
CLI98_RS02865	PF08264	Anticodon-binding domain of tRNA
CLI98_RS02865	PF10458	Valyl tRNA synthetase tRNA binding arm
CLI98_RS02880	PF01476	LysM domain
CLI98_RS02885	PF00202	Aminotransferase class-III
CLI98_RS02890	PF00490	Delta-aminolevulinic acid dehydratase
CLI98_RS02895	PF02602	Uroporphyrinogen-III synthase HemD
CLI98_RS02900	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
CLI98_RS02900	PF03900	Porphobilinogen deaminase, C-terminal domain
CLI98_RS02905	PF01578	CLI98_RS02905
CLI98_RS02910	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
CLI98_RS02910	PF01488	Shikimate / quinate 5-dehydrogenase
CLI98_RS02910	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
CLI98_RS02920	PF01926	50S ribosome-binding GTPase
CLI98_RS02925	PF00004	ATPase family associated with various cellular activities (AAA)
CLI98_RS02925	PF02190	ATP-dependent protease La (LON) domain
CLI98_RS02925	PF05362	Lon protease (S16) C-terminal proteolytic domain
CLI98_RS02930	PF00004	ATPase family associated with various cellular activities (AAA)
CLI98_RS02930	PF05362	Lon protease (S16) C-terminal proteolytic domain
CLI98_RS02935	PF06689	ClpX C4-type zinc finger
CLI98_RS02935	PF07724	AAA domain (Cdc48 subfamily)
CLI98_RS02935	PF10431	C-terminal, D2-small domain, of ClpB protein
CLI98_RS02940	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
CLI98_RS02940	PF05697	Bacterial trigger factor protein (TF)
CLI98_RS02940	PF05698	Bacterial trigger factor protein (TF) C-terminus
CLI98_RS02945	PF14559	Tetratricopeptide repeat
CLI98_RS02950	PF00694	Aconitase C-terminal domain
CLI98_RS02955	PF00330	Aconitase family (aconitate hydratase)
CLI98_RS02960	PF00180	Isocitrate/isopropylmalate dehydrogenase
CLI98_RS02965	PF00682	HMGL-like
CLI98_RS02965	PF08502	LeuA allosteric (dimerisation) domain
CLI98_RS02970	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
CLI98_RS02970	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
CLI98_RS02975	PF01842	ACT domain
CLI98_RS02975	PF10369	Small subunit of acetolactate synthase
CLI98_RS02980	PF00205	Thiamine pyrophosphate enzyme, central domain
CLI98_RS02980	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CLI98_RS02980	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CLI98_RS03000	PF01420	Type I restriction modification DNA specificity domain
CLI98_RS03005	PF02384	N-6 DNA Methylase
CLI98_RS03005	PF12161	HsdM N-terminal domain
CLI98_RS03010	PF00271	Helicase conserved C-terminal domain
CLI98_RS03010	PF04851	Type III restriction enzyme, res subunit
CLI98_RS03010	PF08463	CLI98_RS03010
CLI98_RS03010	PF13643	CLI98_RS03010
CLI98_RS03035	PF12850	Calcineurin-like phosphoesterase superfamily domain
CLI98_RS03040	PF01725	Ham1 family
CLI98_RS03045	PF01138	3' exoribonuclease family, domain 1
CLI98_RS03045	PF03725	3' exoribonuclease family, domain 2
CLI98_RS03050	PF10646	CLI98_RS03050
CLI98_RS03055	PF01177	Asp/Glu/Hydantoin racemase
CLI98_RS03060	PF01047	MarR family
CLI98_RS03065	PF00196	Bacterial regulatory proteins, luxR family
CLI98_RS03070	PF03061	Thioesterase superfamily
CLI98_RS03075	PF13085	2Fe-2S iron-sulfur cluster binding domain
CLI98_RS03075	PF13183	4Fe-4S dicluster domain
CLI98_RS03080	PF00890	FAD binding domain
CLI98_RS03080	PF02910	Fumarate reductase flavoprotein C-term
CLI98_RS03085	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
CLI98_RS03090	PF10702	Protein of unknown function (DUF2507)
CLI98_RS03095	PF00696	Amino acid kinase family
CLI98_RS03095	PF01842	ACT domain
CLI98_RS03095	PF13840	ACT domain
CLI98_RS03105	PF01541	GIY-YIG catalytic domain
CLI98_RS03105	PF02151	UvrB/uvrC motif
CLI98_RS03105	PF08459	UvrC Helix-hairpin-helix N-terminal
CLI98_RS03110	PF00085	Thioredoxin
CLI98_RS03115	PF06964	Alpha-L-arabinofuranosidase C-terminus
CLI98_RS03120	PF00766	Electron transfer flavoprotein FAD-binding domain
CLI98_RS03120	PF01012	Electron transfer flavoprotein domain
CLI98_RS03125	PF01012	Electron transfer flavoprotein domain
CLI98_RS03130	PF00378	Enoyl-CoA hydratase/isomerase family
CLI98_RS03135	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS03135	PF08359	YsiA-like protein, C-terminal region
CLI98_RS03140	PF00501	AMP-binding enzyme
CLI98_RS03140	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS03145	PF10924	CLI98_RS03145
CLI98_RS03150	PF03994	CLI98_RS03150
CLI98_RS03155	PF00488	MutS domain V
CLI98_RS03155	PF01713	Smr domain
CLI98_RS03155	PF05192	MutS domain III
CLI98_RS03160	PF02811	PHP domain
CLI98_RS03160	PF14520	Helix-hairpin-helix domain
CLI98_RS03160	PF14716	Helix-hairpin-helix domain
CLI98_RS03160	PF14791	DNA polymerase beta thumb
CLI98_RS03165	PF02674	CLI98_RS03165
CLI98_RS03170	PF05164	Cell division protein ZapA
CLI98_RS03175	PF01351	Ribonuclease HII
CLI98_RS03175	PF11858	Domain of unknown function (DUF3378)
CLI98_RS03180	PF01588	Putative tRNA binding domain
CLI98_RS03180	PF03147	Ferredoxin-fold anticodon binding domain
CLI98_RS03180	PF03483	B3/4 domain
CLI98_RS03180	PF03484	tRNA synthetase B5 domain
CLI98_RS03185	PF01409	tRNA synthetases class II core domain (F)
CLI98_RS03185	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
CLI98_RS03190	PF00588	SpoU rRNA Methylase family
CLI98_RS03190	PF08032	RNA 2'-O ribose methyltransferase substrate binding
CLI98_RS03195	PF14098	CLI98_RS03195
CLI98_RS03200	PF05651	CLI98_RS03200
CLI98_RS03200	PF13556	PucR C-terminal helix-turn-helix domain
CLI98_RS03205	PF01565	FAD binding domain
CLI98_RS03205	PF02913	FAD linked oxidases, C-terminal domain
CLI98_RS03210	PF02754	CLI98_RS03210
CLI98_RS03210	PF13183	4Fe-4S dicluster domain
CLI98_RS03215	PF02554	CLI98_RS03215
CLI98_RS03215	PF13722	CLI98_RS03215
CLI98_RS03220	PF06964	Alpha-L-arabinofuranosidase C-terminus
CLI98_RS03225	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS03230	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS03235	PF01547	Bacterial extracellular solute-binding protein
CLI98_RS03240	PF13685	Iron-containing alcohol dehydrogenase
CLI98_RS03245	PF13242	HAD-hyrolase-like
CLI98_RS03245	PF13344	Haloacid dehalogenase-like hydrolase
CLI98_RS03250	PF00596	Class II Aldolase and Adducin N-terminal domain
CLI98_RS03255	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CLI98_RS03255	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CLI98_RS03260	PF02610	L-arabinose isomerase
CLI98_RS03260	PF11762	L-arabinose isomerase C-terminal domain
CLI98_RS03265	PF04616	Glycosyl hydrolases family 43
CLI98_RS03270	PF05343	M42 glutamyl aminopeptidase
CLI98_RS03280	PF06961	CLI98_RS03280
CLI98_RS03285	PF00453	Ribosomal protein L20
CLI98_RS03290	PF01632	Ribosomal protein L35
CLI98_RS03295	PF00707	Translation initiation factor IF-3, C-terminal domain
CLI98_RS03295	PF05198	Translation initiation factor IF-3, N-terminal domain
CLI98_RS03300	PF04172	CLI98_RS03300
CLI98_RS03305	PF03788	CLI98_RS03305
CLI98_RS03310	PF00072	Response regulator receiver domain
CLI98_RS03310	PF04397	LytTr DNA-binding domain
CLI98_RS03315	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS03315	PF06580	CLI98_RS03315
CLI98_RS03315	PF07694	5TMR of 5TMR-LYT
CLI98_RS03315	PF13492	GAF domain
CLI98_RS03325	PF00702	haloacid dehalogenase-like hydrolase
CLI98_RS03330	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CLI98_RS03330	PF02824	TGS domain
CLI98_RS03330	PF03129	Anticodon binding domain
CLI98_RS03330	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CLI98_RS03335	PF08812	CLI98_RS03335
CLI98_RS03340	PF09335	CLI98_RS03340
CLI98_RS03345	PF01695	IstB-like ATP binding protein
CLI98_RS03345	PF07319	Primosomal protein DnaI N-terminus
CLI98_RS03350	PF07261	Replication initiation and membrane attachment
CLI98_RS03355	PF03477	ATP cone domain
CLI98_RS03360	PF02675	S-adenosylmethionine decarboxylase
CLI98_RS03365	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CLI98_RS03365	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
CLI98_RS03370	PF01638	HxlR-like helix-turn-helix
CLI98_RS03375	PF07690	Major Facilitator Superfamily
CLI98_RS03380	PF00248	Aldo/keto reductase family
CLI98_RS03385	PF01121	Dephospho-CoA kinase
CLI98_RS03390	PF02659	CLI98_RS03390
CLI98_RS03395	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
CLI98_RS03395	PF06827	Zinc finger found in FPG and IleRS
CLI98_RS03395	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
CLI98_RS03400	PF00476	DNA polymerase family A
CLI98_RS03400	PF01367	5'-3' exonuclease, C-terminal SAM fold
CLI98_RS03400	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
CLI98_RS03405	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS03405	PF00989	PAS fold
CLI98_RS03405	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS03405	PF16736	CLI98_RS03405
CLI98_RS03410	PF00072	Response regulator receiver domain
CLI98_RS03410	PF00486	Transcriptional regulatory protein, C terminal
CLI98_RS03415	PF00056	lactate/malate dehydrogenase, NAD binding domain
CLI98_RS03415	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CLI98_RS03420	PF00180	Isocitrate/isopropylmalate dehydrogenase
CLI98_RS03425	PF00285	Citrate synthase
CLI98_RS03430	PF13424	Tetratricopeptide repeat
CLI98_RS03440	PF01471	Putative peptidoglycan binding domain
CLI98_RS03445	PF11208	CLI98_RS03445
CLI98_RS03455	PF04284	CLI98_RS03455
CLI98_RS03460	PF01594	CLI98_RS03460
CLI98_RS03465	PF04186	CLI98_RS03465
CLI98_RS03470	PF00224	Pyruvate kinase, barrel domain
CLI98_RS03470	PF00391	PEP-utilising enzyme, mobile domain
CLI98_RS03470	PF02887	Pyruvate kinase, alpha/beta domain
CLI98_RS03475	PF00365	Phosphofructokinase
CLI98_RS03480	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
CLI98_RS03485	PF01039	Carboxyl transferase domain
CLI98_RS03490	PF00390	Malic enzyme, N-terminal domain
CLI98_RS03490	PF03949	Malic enzyme, NAD binding domain
CLI98_RS03495	PF01336	OB-fold nucleic acid binding domain
CLI98_RS03495	PF02811	PHP domain
CLI98_RS03495	PF07733	Bacterial DNA polymerase III alpha subunit
CLI98_RS03495	PF14579	Helix-hairpin-helix motif
CLI98_RS03500	PF14034	CLI98_RS03500
CLI98_RS03515	PF01368	DHH family
CLI98_RS03515	PF02272	DHHA1 domain
CLI98_RS03520	PF14007	CLI98_RS03520
CLI98_RS03525	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS03525	PF00571	CBS domain
CLI98_RS03525	PF03061	Thioesterase superfamily
CLI98_RS03525	PF07085	DRTGG domain
CLI98_RS03530	PF13483	Beta-lactamase superfamily domain
CLI98_RS03535	PF13561	Enoyl-(Acyl carrier protein) reductase
CLI98_RS03545	PF00206	Lyase
CLI98_RS03545	PF14698	Argininosuccinate lyase C-terminal
CLI98_RS03550	PF00764	Arginosuccinate synthase
CLI98_RS03555	PF00994	Probable molybdopterin binding domain
CLI98_RS03560	PF00871	Acetokinase family
CLI98_RS03565	PF02384	N-6 DNA Methylase
CLI98_RS03570	PF08534	Redoxin
CLI98_RS03575	PF09579	CLI98_RS03575
CLI98_RS03580	PF11167	CLI98_RS03580
CLI98_RS03585	PF06271	CLI98_RS03585
CLI98_RS03590	PF01343	Peptidase family S49
CLI98_RS03595	PF01513	ATP-NAD kinase
CLI98_RS03600	PF07969	Amidohydrolase family
CLI98_RS03605	PF00501	AMP-binding enzyme
CLI98_RS03605	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS03610	PF00269	Small, acid-soluble spore proteins, alpha/beta type
CLI98_RS03615	PF02568	Thiamine biosynthesis protein (ThiI)
CLI98_RS03615	PF02926	THUMP domain
CLI98_RS03620	PF00266	Aminotransferase class-V
CLI98_RS03625	PF05525	CLI98_RS03625
CLI98_RS03630	PF06160	CLI98_RS03630
CLI98_RS03635	PF02811	PHP domain
CLI98_RS03635	PF13263	PHP-associated
CLI98_RS03640	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS03645	PF13185	GAF domain
CLI98_RS03650	PF00990	GGDEF domain
CLI98_RS03660	PF00163	Ribosomal protein S4/S9 N-terminal domain
CLI98_RS03660	PF01479	S4 domain
CLI98_RS03665	PF00171	Aldehyde dehydrogenase family
CLI98_RS03675	PF00270	DEAD/DEAH box helicase
CLI98_RS03675	PF13307	Helicase C-terminal domain
CLI98_RS03680	PF03796	DnaB-like helicase C terminal domain
CLI98_RS03685	PF00042	Globin
CLI98_RS03685	PF00175	Oxidoreductase NAD-binding domain
CLI98_RS03685	PF00970	Oxidoreductase FAD-binding domain
CLI98_RS03695	PF01965	DJ-1/PfpI family
CLI98_RS03700	PF13472	GDSL-like Lipase/Acylhydrolase family
CLI98_RS03710	PF01545	Cation efflux family
CLI98_RS03710	PF16916	CLI98_RS03710
CLI98_RS03715	PF01978	Sugar-specific transcriptional regulator TrmB
CLI98_RS03715	PF11495	Archaeal transcriptional regulator TrmB
CLI98_RS03720	PF03591	CLI98_RS03720
CLI98_RS03725	PF05437	CLI98_RS03725
CLI98_RS03730	PF00579	tRNA synthetases class I (W and Y)
CLI98_RS03730	PF01479	S4 domain
CLI98_RS03740	PF00501	AMP-binding enzyme
CLI98_RS03740	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS03745	PF00583	Acetyltransferase (GNAT) family
CLI98_RS03750	PF00571	CBS domain
CLI98_RS03755	PF00850	Histone deacetylase domain
CLI98_RS03760	PF00691	OmpA family
CLI98_RS03760	PF13677	CLI98_RS03760
CLI98_RS03765	PF01618	CLI98_RS03765
CLI98_RS03770	PF00356	Bacterial regulatory proteins, lacI family
CLI98_RS03770	PF13377	Periplasmic binding protein-like domain
CLI98_RS03775	PF00793	DAHP synthetase I family
CLI98_RS03775	PF01817	Chorismate mutase type II
CLI98_RS03780	PF11009	Protein of unknown function (DUF2847)
CLI98_RS03785	PF12732	CLI98_RS03785
CLI98_RS03790	PF06103	CLI98_RS03790
CLI98_RS03795	PF01225	Mur ligase family, catalytic domain
CLI98_RS03795	PF02875	Mur ligase family, glutamate ligase domain
CLI98_RS03795	PF08245	Mur ligase middle domain
CLI98_RS03800	PF01580	FtsK/SpoIIIE family
CLI98_RS03800	PF09397	Ftsk gamma domain
CLI98_RS03805	PF01588	Putative tRNA binding domain
CLI98_RS03805	PF14794	Domain of unknown function (DUF4479)
CLI98_RS03810	PF07285	CLI98_RS03810
CLI98_RS03815	PF00085	Thioredoxin
CLI98_RS03820	PF11071	CLI98_RS03820
CLI98_RS03825	PF05343	M42 glutamyl aminopeptidase
CLI98_RS03830	PF03413	Peptidase propeptide and YPEB domain
CLI98_RS03835	PF00390	Malic enzyme, N-terminal domain
CLI98_RS03835	PF03949	Malic enzyme, NAD binding domain
CLI98_RS03840	PF00753	Metallo-beta-lactamase superfamily
CLI98_RS03845	PF02390	Putative methyltransferase
CLI98_RS03850	PF14165	CLI98_RS03850
CLI98_RS03855	PF01636	Phosphotransferase enzyme family
CLI98_RS03860	PF00781	Diacylglycerol kinase catalytic domain
CLI98_RS03870	PF13563	2'-5' RNA ligase superfamily
CLI98_RS03875	PF00291	Pyridoxal-phosphate dependent enzyme
CLI98_RS03880	PF01546	Peptidase family M20/M25/M40
CLI98_RS03885	PF00860	Permease family
CLI98_RS03890	PF05975	CLI98_RS03890
CLI98_RS03895	PF00005	ABC transporter
CLI98_RS03900	PF08220	DeoR-like helix-turn-helix domain
CLI98_RS03905	PF00849	RNA pseudouridylate synthase
CLI98_RS03905	PF01479	S4 domain
CLI98_RS03910	PF01943	CLI98_RS03910
CLI98_RS03910	PF14667	Polysaccharide biosynthesis C-terminal domain
CLI98_RS03915	PF03486	HI0933-like protein
CLI98_RS03920	PF02028	BCCT family transporter
CLI98_RS03925	PF10957	CLI98_RS03925
CLI98_RS03930	PF00356	Bacterial regulatory proteins, lacI family
CLI98_RS03930	PF13377	Periplasmic binding protein-like domain
CLI98_RS03935	PF01547	Bacterial extracellular solute-binding protein
CLI98_RS03940	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS03945	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS03950	PF02056	Family 4 glycosyl hydrolase
CLI98_RS03950	PF11975	Family 4 glycosyl hydrolase C-terminal domain
CLI98_RS03955	PF00583	Acetyltransferase (GNAT) family
CLI98_RS03960	PF00581	Rhodanese-like domain
CLI98_RS03965	PF00133	tRNA synthetases class I (I, L, M and V)
CLI98_RS03965	PF08264	Anticodon-binding domain of tRNA
CLI98_RS03965	PF09334	tRNA synthetases class I (M)
CLI98_RS03965	PF13603	Leucyl-tRNA synthetase, Domain 2
CLI98_RS03970	PF14074	CLI98_RS03970
CLI98_RS03975	PF01740	STAS domain
CLI98_RS03975	PF13426	PAS domain
CLI98_RS03980	PF07690	Major Facilitator Superfamily
CLI98_RS03985	PF09529	CLI98_RS03985
CLI98_RS03995	PF00005	ABC transporter
CLI98_RS04000	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS04005	PF00072	Response regulator receiver domain
CLI98_RS04005	PF00486	Transcriptional regulatory protein, C terminal
CLI98_RS04010	PF02687	CLI98_RS04010
CLI98_RS04010	PF12704	MacB-like periplasmic core domain
CLI98_RS04015	PF00005	ABC transporter
CLI98_RS04030	PF12679	CLI98_RS04030
CLI98_RS04035	PF00005	ABC transporter
CLI98_RS04040	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS04045	PF10732	CLI98_RS04045
CLI98_RS04050	PF04055	Radical SAM superfamily
CLI98_RS04050	PF16199	CLI98_RS04050
CLI98_RS04055	PF06962	Putative rRNA methylase
CLI98_RS04065	PF03009	Glycerophosphoryl diester phosphodiesterase family
CLI98_RS04070	PF10776	CLI98_RS04070
CLI98_RS04075	PF12146	Putative lysophospholipase
CLI98_RS04080	PF00132	Bacterial transferase hexapeptide (six repeats)
CLI98_RS04085	PF00324	Amino acid permease
CLI98_RS04090	PF00733	Asparagine synthase
CLI98_RS04090	PF13537	Glutamine amidotransferase domain
CLI98_RS04095	PF00438	S-adenosylmethionine synthetase, N-terminal domain
CLI98_RS04095	PF02772	S-adenosylmethionine synthetase, central domain
CLI98_RS04095	PF02773	S-adenosylmethionine synthetase, C-terminal domain
CLI98_RS04100	PF01293	Phosphoenolpyruvate carboxykinase
CLI98_RS04105	PF10763	Protein of unknown function (DUF2584)
CLI98_RS04110	PF00326	Prolyl oligopeptidase family
CLI98_RS04115	PF13379	NMT1-like family
CLI98_RS04120	PF00005	ABC transporter
CLI98_RS04125	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS04130	PF00293	NUDIX domain
CLI98_RS04135	PF05105	CLI98_RS04135
CLI98_RS04140	PF00210	Ferritin-like domain
CLI98_RS04150	PF13115	CLI98_RS04150
CLI98_RS04155	PF02664	S-Ribosylhomocysteinase (LuxS)
CLI98_RS04160	PF01809	CLI98_RS04160
CLI98_RS04165	PF00484	Carbonic anhydrase
CLI98_RS04170	PF01197	Ribosomal protein L31
CLI98_RS04175	PF01654	CLI98_RS04175
CLI98_RS04180	PF02322	CLI98_RS04180
CLI98_RS04185	PF07561	CLI98_RS04185
CLI98_RS04190	PF00950	CLI98_RS04190
CLI98_RS04195	PF00950	CLI98_RS04195
CLI98_RS04200	PF00005	ABC transporter
CLI98_RS04205	PF01297	Periplasmic solute binding protein family
CLI98_RS04210	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
CLI98_RS04210	PF13378	Enolase C-terminal domain-like
CLI98_RS04215	PF00501	AMP-binding enzyme
CLI98_RS04215	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS04220	PF00378	Enoyl-CoA hydratase/isomerase family
CLI98_RS04225	PF00561	alpha/beta hydrolase fold
CLI98_RS04230	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CLI98_RS04230	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CLI98_RS04230	PF16582	CLI98_RS04230
CLI98_RS04235	PF00425	chorismate binding enzyme
CLI98_RS04240	PF01258	Prokaryotic dksA/traR C4-type zinc finger
CLI98_RS04245	PF03073	TspO/MBR family
CLI98_RS04370	PF09515	Thiamine transporter protein (Thia_YuaJ)
CLI98_RS04375	PF01145	SPFH domain / Band 7 family
CLI98_RS04375	PF15975	CLI98_RS04375
CLI98_RS04385	PF12867	DinB superfamily
CLI98_RS04390	PF03473	MOSC domain
CLI98_RS04395	PF00465	Iron-containing alcohol dehydrogenase
CLI98_RS04400	PF00171	Aldehyde dehydrogenase family
CLI98_RS04415	PF02080	TrkA-C domain
CLI98_RS04415	PF02254	TrkA-N domain
CLI98_RS04420	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CLI98_RS04420	PF13457	SH3-like domain
CLI98_RS04425	PF00042	Globin
CLI98_RS04425	PF00175	Oxidoreductase NAD-binding domain
CLI98_RS04425	PF00970	Oxidoreductase FAD-binding domain
CLI98_RS04445	PF02673	CLI98_RS04445
CLI98_RS04450	PF01594	CLI98_RS04450
CLI98_RS04455	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CLI98_RS04460	PF01965	DJ-1/PfpI family
CLI98_RS04465	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CLI98_RS04465	PF00672	HAMP domain
CLI98_RS04465	PF02743	Cache domain
CLI98_RS04470	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CLI98_RS04470	PF00672	HAMP domain
CLI98_RS04470	PF02743	Cache domain
CLI98_RS04475	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CLI98_RS04475	PF00672	HAMP domain
CLI98_RS04475	PF02743	Cache domain
CLI98_RS04480	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CLI98_RS04480	PF00672	HAMP domain
CLI98_RS04480	PF02743	Cache domain
CLI98_RS04495	PF03060	Nitronate monooxygenase
CLI98_RS04500	PF01894	Uncharacterised protein family UPF0047
CLI98_RS04505	PF00128	Alpha amylase, catalytic domain
CLI98_RS04505	PF16657	CLI98_RS04505
CLI98_RS04510	PF00571	CBS domain
CLI98_RS04510	PF01595	CLI98_RS04510
CLI98_RS04510	PF03471	Transporter associated domain
CLI98_RS04515	PF04298	CLI98_RS04515
CLI98_RS04525	PF11458	Membrane-integrating protein Mistic
CLI98_RS04530	PF02254	TrkA-N domain
CLI98_RS04530	PF07885	Ion channel
CLI98_RS04535	PF08868	YugN-like family
CLI98_RS04545	PF00342	Phosphoglucose isomerase
CLI98_RS04555	PF03358	NADPH-dependent FMN reductase
CLI98_RS04560	PF00857	Isochorismatase family
CLI98_RS04565	PF00465	Iron-containing alcohol dehydrogenase
CLI98_RS04570	PF00465	Iron-containing alcohol dehydrogenase
CLI98_RS04575	PF04070	CLI98_RS04575
CLI98_RS04580	PF00575	S1 RNA binding domain
CLI98_RS04585	PF00155	Aminotransferase class I and II
CLI98_RS04590	PF01037	AsnC family
CLI98_RS04590	PF13412	Winged helix-turn-helix DNA-binding
CLI98_RS04595	PF00561	alpha/beta hydrolase fold
CLI98_RS04600	PF08958	Domain of unknown function (DUF1871)
CLI98_RS04605	PF00155	Aminotransferase class I and II
CLI98_RS04610	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS04610	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS04615	PF08810	Kinase associated protein B
CLI98_RS04620	PF00929	Exonuclease
CLI98_RS04625	PF07690	Major Facilitator Superfamily
CLI98_RS04630	PF00905	Penicillin binding protein transpeptidase domain
CLI98_RS04630	PF00912	Transglycosylase
CLI98_RS04635	PF04134	CLI98_RS04635
CLI98_RS04640	PF17328	CLI98_RS04640
CLI98_RS04645	PF00989	PAS fold
CLI98_RS04645	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS04645	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
CLI98_RS04645	PF17203	CLI98_RS04645
CLI98_RS04650	PF00072	Response regulator receiver domain
CLI98_RS04655	PF02608	Basic membrane protein
CLI98_RS04660	PF00005	ABC transporter
CLI98_RS04665	PF02653	CLI98_RS04665
CLI98_RS04670	PF02653	CLI98_RS04670
CLI98_RS04680	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
CLI98_RS04680	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
CLI98_RS04680	PF13244	CLI98_RS04680
CLI98_RS04685	PF04039	CLI98_RS04685
CLI98_RS04690	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
CLI98_RS04695	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
CLI98_RS04700	PF01899	CLI98_RS04700
CLI98_RS04705	PF04066	CLI98_RS04705
CLI98_RS04710	PF03334	CLI98_RS04710
CLI98_RS04715	PF03061	Thioesterase superfamily
CLI98_RS04720	PF00072	Response regulator receiver domain
CLI98_RS04720	PF00196	Bacterial regulatory proteins, luxR family
CLI98_RS04725	PF07730	Histidine kinase
CLI98_RS04730	PF05952	CLI98_RS04730
CLI98_RS04735	PF00348	Polyprenyl synthetase
CLI98_RS04740	PF08181	CLI98_RS04740
CLI98_RS04755	PF00563	EAL domain
CLI98_RS04755	PF08668	HDOD domain
CLI98_RS04760	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
CLI98_RS04765	PF00857	Isochorismatase family
CLI98_RS04770	PF07997	Protein of unknown function (DUF1694)
CLI98_RS04775	PF14166	CLI98_RS04775
CLI98_RS04780	PF10676	CLI98_RS04780
CLI98_RS04785	PF01594	CLI98_RS04785
CLI98_RS04790	PF10842	CLI98_RS04790
CLI98_RS04795	PF01966	HD domain
CLI98_RS04800	PF00106	short chain dehydrogenase
CLI98_RS04805	PF17355	CLI98_RS04805
CLI98_RS04815	PF01580	FtsK/SpoIIIE family
CLI98_RS04815	PF12538	DNA transporter
CLI98_RS04820	PF10140	WXG100 protein secretion system (Wss), protein YukC
CLI98_RS04825	PF08817	WXG100 protein secretion system (Wss), protein YukD
CLI98_RS04830	PF06013	Proteins of 100 residues with WXG
CLI98_RS04835	PF06018	CodY GAF-like domain
CLI98_RS04835	PF13556	PucR C-terminal helix-turn-helix domain
CLI98_RS04840	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
CLI98_RS04840	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
CLI98_RS04845	PF10042	CLI98_RS04845
CLI98_RS04850	PF03621	MbtH-like protein
CLI98_RS04855	PF00501	AMP-binding enzyme
CLI98_RS04855	PF00550	Phosphopantetheine attachment site
CLI98_RS04855	PF00668	Condensation domain
CLI98_RS04855	PF00975	Thioesterase domain
CLI98_RS04855	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS04860	PF00550	Phosphopantetheine attachment site
CLI98_RS04860	PF00857	Isochorismatase family
CLI98_RS04865	PF00501	AMP-binding enzyme
CLI98_RS04865	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS04870	PF00425	chorismate binding enzyme
CLI98_RS04875	PF00106	short chain dehydrogenase
CLI98_RS04880	PF00756	Putative esterase
CLI98_RS04885	PF00174	Oxidoreductase molybdopterin binding domain
CLI98_RS04890	PF02632	BioY family
CLI98_RS04895	PF03553	CLI98_RS04895
CLI98_RS04895	PF13726	CLI98_RS04895
CLI98_RS04900	PF00883	Cytosol aminopeptidase family, catalytic domain
CLI98_RS04900	PF02789	Cytosol aminopeptidase family, N-terminal domain
CLI98_RS04905	PF02681	CLI98_RS04905
CLI98_RS04910	PF06725	3D domain
CLI98_RS04915	PF14068	CLI98_RS04915
CLI98_RS04920	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CLI98_RS04930	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CLI98_RS04935	PF00478	IMP dehydrogenase / GMP reductase domain
CLI98_RS04945	PF01944	CLI98_RS04945
CLI98_RS04950	PF00005	ABC transporter
CLI98_RS04960	PF09221	Bacteriocin class IId cyclical uberolysin-like
CLI98_RS04970	PF13302	Acetyltransferase (GNAT) domain
CLI98_RS04975	PF00106	short chain dehydrogenase
CLI98_RS04980	PF01521	Iron-sulphur cluster biosynthesis
CLI98_RS04985	PF01678	Diaminopimelate epimerase
CLI98_RS04990	PF01773	Na+ dependent nucleoside transporter N-terminus
CLI98_RS04990	PF07662	Na+ dependent nucleoside transporter C-terminus
CLI98_RS04995	PF07293	CLI98_RS04995
CLI98_RS05000	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CLI98_RS05005	PF07315	Protein of unknown function (DUF1462)
CLI98_RS05010	PF01106	NifU-like domain
CLI98_RS05015	PF00326	Prolyl oligopeptidase family
CLI98_RS05015	PF07676	WD40-like Beta Propeller Repeat
CLI98_RS05020	PF00288	GHMP kinases N terminal domain
CLI98_RS05020	PF08544	GHMP kinases C terminal
CLI98_RS05025	PF00291	Pyridoxal-phosphate dependent enzyme
CLI98_RS05030	PF00742	Homoserine dehydrogenase
CLI98_RS05030	PF01842	ACT domain
CLI98_RS05030	PF03447	Homoserine dehydrogenase, NAD binding domain
CLI98_RS05040	PF04608	Phosphatidylglycerophosphatase A
CLI98_RS05045	PF13242	HAD-hyrolase-like
CLI98_RS05045	PF13344	Haloacid dehalogenase-like hydrolase
CLI98_RS05050	PF01934	Protein of unknown function DUF86
CLI98_RS05055	PF06265	Protein of unknown function (DUF1027)
CLI98_RS05065	PF04055	Radical SAM superfamily
CLI98_RS05065	PF16881	CLI98_RS05065
CLI98_RS05070	PF01551	Peptidase family M23
CLI98_RS05075	PF09560	CLI98_RS05075
CLI98_RS05080	PF00149	Calcineurin-like phosphoesterase
CLI98_RS05080	PF02872	5'-nucleotidase, C-terminal domain
CLI98_RS05085	PF01925	CLI98_RS05085
CLI98_RS05090	PF01904	Protein of unknown function DUF72
CLI98_RS05100	PF01979	Amidohydrolase family
CLI98_RS05105	PF07905	CLI98_RS05105
CLI98_RS05105	PF13556	PucR C-terminal helix-turn-helix domain
CLI98_RS05110	PF13424	Tetratricopeptide repeat
CLI98_RS05125	PF07690	Major Facilitator Superfamily
CLI98_RS05130	PF00266	Aminotransferase class-V
CLI98_RS05135	PF01546	Peptidase family M20/M25/M40
CLI98_RS05140	PF04231	Endonuclease I
CLI98_RS05145	PF00005	ABC transporter
CLI98_RS05145	PF08402	TOBE domain
CLI98_RS05150	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS05150	PF07702	UTRA domain
CLI98_RS05155	PF00294	pfkB family carbohydrate kinase
CLI98_RS05160	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS05165	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS05170	PF01547	Bacterial extracellular solute-binding protein
CLI98_RS05175	PF01380	SIS domain
CLI98_RS05180	PF13411	MerR HTH family regulatory protein
CLI98_RS05195	PF17418	CLI98_RS05195
CLI98_RS05200	PF07853	CLI98_RS05200
CLI98_RS05205	PF01541	GIY-YIG catalytic domain
CLI98_RS05210	PF01266	FAD dependent oxidoreductase
CLI98_RS05225	PF10903	CLI98_RS05225
CLI98_RS05235	PF01374	Glycosyl hydrolase family 46
CLI98_RS05240	PF01458	Uncharacterized protein family (UPF0051)
CLI98_RS05245	PF01592	NifU-like N terminal domain
CLI98_RS05250	PF00266	Aminotransferase class-V
CLI98_RS05255	PF01458	Uncharacterized protein family (UPF0051)
CLI98_RS05260	PF00005	ABC transporter
CLI98_RS05270	PF02627	Carboxymuconolactone decarboxylase family
CLI98_RS05275	PF03180	NLPA lipoprotein
CLI98_RS05280	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS05285	PF00005	ABC transporter
CLI98_RS05285	PF09383	NIL domain
CLI98_RS05290	PF02036	SCP-2 sterol transfer family
CLI98_RS05295	PF00085	Thioredoxin
CLI98_RS05300	PF13155	Toprim-like
CLI98_RS05305	PF10830	CLI98_RS05305
CLI98_RS05310	PF01597	Glycine cleavage H-protein
CLI98_RS05315	PF03960	ArsC family
CLI98_RS05320	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
CLI98_RS05320	PF02770	Acyl-CoA dehydrogenase, middle domain
CLI98_RS05320	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
CLI98_RS05325	PF00108	Thiolase, N-terminal domain
CLI98_RS05325	PF02803	Thiolase, C-terminal domain
CLI98_RS05330	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
CLI98_RS05330	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
CLI98_RS05330	PF16113	CLI98_RS05330
CLI98_RS05335	PF14115	CLI98_RS05335
CLI98_RS05340	PF01619	Proline dehydrogenase
CLI98_RS05350	PF07875	CLI98_RS05350
CLI98_RS05355	PF01047	MarR family
CLI98_RS05360	PF07690	Major Facilitator Superfamily
CLI98_RS05365	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CLI98_RS05365	PF03466	LysR substrate binding domain
CLI98_RS05370	PF06314	Acetoacetate decarboxylase (ADC)
CLI98_RS05375	PF02558	Ketopantoate reductase PanE/ApbA
CLI98_RS05375	PF08546	Ketopantoate reductase PanE/ApbA C terminal
CLI98_RS05380	PF10835	CLI98_RS05380
CLI98_RS05385	PF00005	ABC transporter
CLI98_RS05390	PF14039	CLI98_RS05390
CLI98_RS05395	PF01432	Peptidase family M3
CLI98_RS05395	PF08439	Oligopeptidase F
CLI98_RS05400	PF00106	short chain dehydrogenase
CLI98_RS05405	PF00210	Ferritin-like domain
CLI98_RS05410	PF13180	PDZ domain
CLI98_RS05410	PF13365	Trypsin-like peptidase domain
CLI98_RS05415	PF00072	Response regulator receiver domain
CLI98_RS05415	PF00486	Transcriptional regulatory protein, C terminal
CLI98_RS05420	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS05420	PF00672	HAMP domain
CLI98_RS05420	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS05430	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS05435	PF00206	Lyase
CLI98_RS05435	PF10415	Fumarase C C-terminus
CLI98_RS05440	PF13113	CLI98_RS05440
CLI98_RS05445	PF03323	CLI98_RS05445
CLI98_RS05450	PF03845	CLI98_RS05450
CLI98_RS05455	PF05504	Spore germination B3/ GerAC like, C-terminal
CLI98_RS05460	PF00072	Response regulator receiver domain
CLI98_RS05460	PF00196	Bacterial regulatory proteins, luxR family
CLI98_RS05465	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS05465	PF07730	Histidine kinase
CLI98_RS05470	PF09922	Cell wall-active antibiotics response protein (DUF2154)
CLI98_RS05475	PF13349	CLI98_RS05475
CLI98_RS05480	PF04012	CLI98_RS05480
CLI98_RS05490	PF07690	Major Facilitator Superfamily
CLI98_RS05495	PF01923	Cobalamin adenosyltransferase
CLI98_RS05500	PF00005	ABC transporter
CLI98_RS05505	PF01032	FecCD transport family
CLI98_RS05510	PF01497	Periplasmic binding protein
CLI98_RS05515	PF00106	short chain dehydrogenase
CLI98_RS05520	PF08450	SMP-30/Gluconolaconase/LRE-like region
CLI98_RS05525	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS05525	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS05530	PF00072	Response regulator receiver domain
CLI98_RS05530	PF00486	Transcriptional regulatory protein, C terminal
CLI98_RS05535	PF12645	CLI98_RS05535
CLI98_RS05540	PF04545	Sigma-70, region 4
CLI98_RS05545	PF12841	CLI98_RS05545
CLI98_RS05550	PF00190	Cupin
CLI98_RS05555	PF14184	CLI98_RS05555
CLI98_RS05560	PF00005	ABC transporter
CLI98_RS05565	PF01032	FecCD transport family
CLI98_RS05570	PF01032	FecCD transport family
CLI98_RS05575	PF01497	Periplasmic binding protein
CLI98_RS05580	PF01053	Cys/Met metabolism PLP-dependent enzyme
CLI98_RS05585	PF00892	EamA-like transporter family
CLI98_RS05590	PF01047	MarR family
CLI98_RS05595	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
CLI98_RS05600	PF00085	Thioredoxin
CLI98_RS05605	PF01597	Glycine cleavage H-protein
CLI98_RS05610	PF01272	Transcription elongation factor, GreA/GreB, C-term
CLI98_RS05610	PF03449	Transcription elongation factor, N-terminal
CLI98_RS05615	PF07690	Major Facilitator Superfamily
CLI98_RS05620	PF02566	OsmC-like protein
CLI98_RS05625	PF02627	Carboxymuconolactone decarboxylase family
CLI98_RS05630	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CLI98_RS05635	PF00085	Thioredoxin
CLI98_RS05640	PF02566	OsmC-like protein
CLI98_RS05645	PF00085	Thioredoxin
CLI98_RS05650	PF01323	DSBA-like thioredoxin domain
CLI98_RS05655	PF01597	Glycine cleavage H-protein
CLI98_RS05660	PF02566	OsmC-like protein
CLI98_RS05665	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS05665	PF16925	CLI98_RS05665
CLI98_RS05670	PF04072	Leucine carboxyl methyltransferase
CLI98_RS05675	PF13520	Amino acid permease
CLI98_RS05685	PF09575	CLI98_RS05685
CLI98_RS05690	PF04307	CLI98_RS05690
CLI98_RS05695	PF00884	Sulfatase
CLI98_RS05700	PF12727	PBP superfamily domain
CLI98_RS05700	PF12728	Helix-turn-helix domain
CLI98_RS05705	PF13531	Bacterial extracellular solute-binding protein
CLI98_RS05710	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS05715	PF00072	Response regulator receiver domain
CLI98_RS05715	PF00196	Bacterial regulatory proteins, luxR family
CLI98_RS05720	PF07730	Histidine kinase
CLI98_RS05725	PF00005	ABC transporter
CLI98_RS05730	PF12698	ABC-2 family transporter protein
CLI98_RS05735	PF12698	ABC-2 family transporter protein
CLI98_RS05740	PF00248	Aldo/keto reductase family
CLI98_RS05750	PF00999	Sodium/hydrogen exchanger family
CLI98_RS05760	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
CLI98_RS05760	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
CLI98_RS05765	PF00175	Oxidoreductase NAD-binding domain
CLI98_RS05765	PF00258	Flavodoxin
CLI98_RS05765	PF00667	FAD binding domain
CLI98_RS05770	PF13245	Part of AAA domain
CLI98_RS05770	PF13538	UvrD-like helicase C-terminal domain
CLI98_RS05775	PF03458	CLI98_RS05775
CLI98_RS05780	PF13688	Metallo-peptidase family M12
CLI98_RS05785	PF02600	Disulfide bond formation protein DsbB
CLI98_RS05790	PF13462	Thioredoxin
CLI98_RS05795	PF00122	E1-E2 ATPase
CLI98_RS05795	PF00403	Heavy-metal-associated domain
CLI98_RS05795	PF00702	haloacid dehalogenase-like hydrolase
CLI98_RS05800	PF00122	E1-E2 ATPase
CLI98_RS05800	PF00403	Heavy-metal-associated domain
CLI98_RS05800	PF00702	haloacid dehalogenase-like hydrolase
CLI98_RS05805	PF00403	Heavy-metal-associated domain
CLI98_RS05810	PF02583	Metal-sensitive transcriptional repressor
CLI98_RS05815	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CLI98_RS05815	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CLI98_RS05820	PF02525	Flavodoxin-like fold
CLI98_RS05825	PF00296	Luciferase-like monooxygenase
CLI98_RS05830	PF00462	Glutaredoxin
CLI98_RS05835	PF00296	Luciferase-like monooxygenase
CLI98_RS05840	PF00005	ABC transporter
CLI98_RS05845	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS05850	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS05855	PF00497	Bacterial extracellular solute-binding proteins, family 3
CLI98_RS05860	PF00497	Bacterial extracellular solute-binding proteins, family 3
CLI98_RS05865	PF00583	Acetyltransferase (GNAT) family
CLI98_RS05870	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CLI98_RS05870	PF03466	LysR substrate binding domain
CLI98_RS05875	PF00106	short chain dehydrogenase
CLI98_RS05880	PF01337	Barstar (barnase inhibitor)
CLI98_RS05885	PF01337	Barstar (barnase inhibitor)
CLI98_RS05895	PF01668	SmpB protein
CLI98_RS05900	PF00575	S1 RNA binding domain
CLI98_RS05900	PF00773	RNB domain
CLI98_RS05900	PF08206	Ribonuclease B OB domain
CLI98_RS05905	PF12146	Putative lysophospholipase
CLI98_RS05910	PF03840	Preprotein translocase SecG subunit
CLI98_RS05915	PF01381	Helix-turn-helix
CLI98_RS05920	PF13560	Helix-turn-helix domain
CLI98_RS05925	PF13560	Helix-turn-helix domain
CLI98_RS05930	PF01638	HxlR-like helix-turn-helix
CLI98_RS05935	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS05935	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS05940	PF00072	Response regulator receiver domain
CLI98_RS05940	PF00486	Transcriptional regulatory protein, C terminal
CLI98_RS05945	PF12730	CLI98_RS05945
CLI98_RS05955	PF00005	ABC transporter
CLI98_RS05960	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS05965	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
CLI98_RS05970	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS05975	PF00005	ABC transporter
CLI98_RS05975	PF00571	CBS domain
CLI98_RS05985	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS05990	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
CLI98_RS05995	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS06000	PF00005	ABC transporter
CLI98_RS06000	PF00571	CBS domain
CLI98_RS06005	PF12802	MarR family
CLI98_RS06010	PF01914	CLI98_RS06010
CLI98_RS06030	PF00583	Acetyltransferase (GNAT) family
CLI98_RS06035	PF00113	Enolase, C-terminal TIM barrel domain
CLI98_RS06035	PF03952	Enolase, N-terminal domain
CLI98_RS06040	PF01676	Metalloenzyme superfamily
CLI98_RS06040	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
CLI98_RS06045	PF00121	Triosephosphate isomerase
CLI98_RS06050	PF00162	Phosphoglycerate kinase
CLI98_RS06060	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CLI98_RS06060	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
CLI98_RS06065	PF04198	Putative sugar-binding domain
CLI98_RS06070	PF00083	Sugar (and other) transporter
CLI98_RS06075	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS06075	PF13377	Periplasmic binding protein-like domain
CLI98_RS06080	PF00296	Luciferase-like monooxygenase
CLI98_RS06085	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CLI98_RS06085	PF03466	LysR substrate binding domain
CLI98_RS06090	PF00892	EamA-like transporter family
CLI98_RS06095	PF00324	Amino acid permease
CLI98_RS06100	PF01380	SIS domain
CLI98_RS06100	PF01418	Helix-turn-helix domain, rpiR family
CLI98_RS06105	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CLI98_RS06105	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CLI98_RS06110	PF02447	CLI98_RS06110
CLI98_RS06115	PF02589	Uncharacterised ACR, YkgG family COG1556
CLI98_RS06120	PF02589	Uncharacterised ACR, YkgG family COG1556
CLI98_RS06120	PF11870	CLI98_RS06120
CLI98_RS06120	PF13183	4Fe-4S dicluster domain
CLI98_RS06125	PF02754	CLI98_RS06125
CLI98_RS06130	PF00155	Aminotransferase class I and II
CLI98_RS06135	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS06135	PF07729	FCD domain
CLI98_RS06140	PF02652	CLI98_RS06140
CLI98_RS06145	PF00309	CLI98_RS06145
CLI98_RS06145	PF04552	Sigma-54, DNA binding domain
CLI98_RS06145	PF04963	Sigma-54 factor, core binding domain
CLI98_RS06150	PF09628	YvfG protein
CLI98_RS06155	PF04230	CLI98_RS06155
CLI98_RS06160	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
CLI98_RS06165	PF00132	Bacterial transferase hexapeptide (six repeats)
CLI98_RS06170	PF02397	CLI98_RS06170
CLI98_RS06175	PF01943	CLI98_RS06175
CLI98_RS06175	PF14667	Polysaccharide biosynthesis C-terminal domain
CLI98_RS06180	PF00535	Glycosyl transferase family 2
CLI98_RS06185	PF04230	CLI98_RS06185
CLI98_RS06190	PF00535	Glycosyl transferase family 2
CLI98_RS06195	PF14897	CLI98_RS06195
CLI98_RS06200	PF00534	Glycosyl transferases group 1
CLI98_RS06200	PF13439	Glycosyltransferase Family 4
CLI98_RS06205	PF00535	Glycosyl transferase family 2
CLI98_RS06210	PF00534	Glycosyl transferases group 1
CLI98_RS06210	PF13477	Glycosyl transferase 4-like
CLI98_RS06215	PF02719	Polysaccharide biosynthesis protein
CLI98_RS06215	PF13727	CoA-binding domain
CLI98_RS06220	PF13614	AAA domain
CLI98_RS06225	PF02706	Chain length determinant protein
CLI98_RS06230	PF01381	Helix-turn-helix
CLI98_RS06230	PF08671	Anti-repressor SinI
CLI98_RS06235	PF00135	Carboxylesterase family
CLI98_RS06245	PF01872	RibD C-terminal domain
CLI98_RS06255	PF00583	Acetyltransferase (GNAT) family
CLI98_RS06260	PF05870	Phenolic acid decarboxylase (PAD)
CLI98_RS06265	PF11578	Protein of unknown function (DUF3237)
CLI98_RS06270	PF07252	Protein of unknown function (DUF1433)
CLI98_RS06275	PF07252	Protein of unknown function (DUF1433)
CLI98_RS06285	PF07252	Protein of unknown function (DUF1433)
CLI98_RS06295	PF07252	Protein of unknown function (DUF1433)
CLI98_RS06300	PF01764	Lipase (class 3)
CLI98_RS06315	PF00251	Glycosyl hydrolases family 32 N-terminal domain
CLI98_RS06315	PF08244	Glycosyl hydrolases family 32 C terminal
CLI98_RS06320	PF01306	LacY proton/sugar symporter
CLI98_RS06325	PF00356	Bacterial regulatory proteins, lacI family
CLI98_RS06325	PF13377	Periplasmic binding protein-like domain
CLI98_RS06330	PF00574	Clp protease
CLI98_RS06335	PF13419	Haloacid dehalogenase-like hydrolase
CLI98_RS06340	PF00128	Alpha amylase, catalytic domain
CLI98_RS06340	PF16657	CLI98_RS06340
CLI98_RS06345	PF03632	Glycosyl hydrolase family 65 central catalytic domain
CLI98_RS06345	PF03633	Glycosyl hydrolase family 65, C-terminal domain
CLI98_RS06345	PF03636	Glycosyl hydrolase family 65, N-terminal domain
CLI98_RS06350	PF06691	CLI98_RS06350
CLI98_RS06355	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS06360	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS06365	PF13416	Bacterial extracellular solute-binding protein
CLI98_RS06370	PF00128	Alpha amylase, catalytic domain
CLI98_RS06370	PF02903	Alpha amylase, N-terminal ig-like domain
CLI98_RS06375	PF00356	Bacterial regulatory proteins, lacI family
CLI98_RS06375	PF13377	Periplasmic binding protein-like domain
CLI98_RS06380	PF03641	Possible lysine decarboxylase
CLI98_RS06385	PF03819	MazG nucleotide pyrophosphohydrolase domain
CLI98_RS06390	PF00916	CLI98_RS06390
CLI98_RS06390	PF01740	STAS domain
CLI98_RS06395	PF00484	Carbonic anhydrase
CLI98_RS06405	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CLI98_RS06405	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CLI98_RS06410	PF00545	ribonuclease
CLI98_RS06415	PF00797	N-acetyltransferase
CLI98_RS06420	PF00381	PTS HPr component phosphorylation site
CLI98_RS06425	PF02650	WhiA C-terminal HTH domain
CLI98_RS06425	PF10298	WhiA N-terminal LAGLIDADG-like domain
CLI98_RS06425	PF14527	WhiA LAGLIDADG-like domain
CLI98_RS06430	PF01933	Uncharacterised protein family UPF0052
CLI98_RS06435	PF03668	CLI98_RS06435
CLI98_RS06440	PF00293	NUDIX domain
CLI98_RS06445	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CLI98_RS06450	PF00877	NlpC/P60 family
CLI98_RS06455	PF13432	Tetratricopeptide repeat
CLI98_RS06460	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS06460	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS06465	PF00072	Response regulator receiver domain
CLI98_RS06465	PF00486	Transcriptional regulatory protein, C terminal
CLI98_RS06475	PF00005	ABC transporter
CLI98_RS06475	PF00664	ABC transporter transmembrane region
CLI98_RS06480	PF01502	Phosphoribosyl-AMP cyclohydrolase
CLI98_RS06480	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
CLI98_RS06485	PF00977	Histidine biosynthesis protein
CLI98_RS06490	PF00977	Histidine biosynthesis protein
CLI98_RS06495	PF00117	Glutamine amidotransferase class-I
CLI98_RS06500	PF00475	Imidazoleglycerol-phosphate dehydratase
CLI98_RS06505	PF00815	Histidinol dehydrogenase
CLI98_RS06510	PF01634	ATP phosphoribosyltransferase
CLI98_RS06515	PF13393	Histidyl-tRNA synthetase
CLI98_RS06520	PF13529	Peptidase_C39 like family
CLI98_RS06525	PF14602	Hexapeptide repeat of succinyl-transferase
CLI98_RS06530	PF13419	Haloacid dehalogenase-like hydrolase
CLI98_RS06535	PF01790	CLI98_RS06535
CLI98_RS06540	PF02603	HPr Serine kinase N terminus
CLI98_RS06540	PF07475	HPr Serine kinase C-terminal domain
CLI98_RS06545	PF01979	Amidohydrolase family
CLI98_RS06550	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
CLI98_RS06555	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS06555	PF07702	UTRA domain
CLI98_RS06560	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS06565	PF00149	Calcineurin-like phosphoesterase
CLI98_RS06565	PF00932	Lamin Tail Domain
CLI98_RS06570	PF04020	CLI98_RS06570
CLI98_RS06575	PF04024	CLI98_RS06575
CLI98_RS06580	PF13349	CLI98_RS06580
CLI98_RS06595	PF00005	ABC transporter
CLI98_RS06600	PF00271	Helicase conserved C-terminal domain
CLI98_RS06600	PF02151	UvrB/uvrC motif
CLI98_RS06600	PF04851	Type III restriction enzyme, res subunit
CLI98_RS06600	PF12344	Ultra-violet resistance protein B
CLI98_RS06605	PF09964	CLI98_RS06605
CLI98_RS06610	PF00391	PEP-utilising enzyme, mobile domain
CLI98_RS06610	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
CLI98_RS06615	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS06620	PF07690	Major Facilitator Superfamily
CLI98_RS06625	PF00975	Thioesterase domain
CLI98_RS06630	PF12725	CLI98_RS06630
CLI98_RS06635	PF03435	Saccharopine dehydrogenase
CLI98_RS06640	PF00005	ABC transporter
CLI98_RS06640	PF00664	ABC transporter transmembrane region
CLI98_RS06645	PF00501	AMP-binding enzyme
CLI98_RS06645	PF00550	Phosphopantetheine attachment site
CLI98_RS06645	PF00668	Condensation domain
CLI98_RS06645	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS06650	PF00501	AMP-binding enzyme
CLI98_RS06650	PF00550	Phosphopantetheine attachment site
CLI98_RS06650	PF00668	Condensation domain
CLI98_RS06650	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS06655	PF00106	short chain dehydrogenase
CLI98_RS06675	PF17423	CLI98_RS06675
CLI98_RS06680	PF01471	Putative peptidoglycan binding domain
CLI98_RS06680	PF03572	Peptidase family S41
CLI98_RS06680	PF13180	PDZ domain
CLI98_RS06685	PF13229	Right handed beta helix region
CLI98_RS06690	PF02687	CLI98_RS06690
CLI98_RS06695	PF00005	ABC transporter
CLI98_RS06700	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
CLI98_RS06705	PF02588	CLI98_RS06705
CLI98_RS06705	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CLI98_RS06715	PF01043	SecA preprotein cross-linking domain
CLI98_RS06715	PF02810	SEC-C motif
CLI98_RS06715	PF07516	SecA Wing and Scaffold domain
CLI98_RS06715	PF07517	SecA DEAD-like domain
CLI98_RS06720	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
CLI98_RS06720	PF16321	CLI98_RS06720
CLI98_RS06735	PF02561	Flagellar protein FliS
CLI98_RS06740	PF02465	CLI98_RS06740
CLI98_RS06740	PF07195	CLI98_RS06740
CLI98_RS06740	PF07196	Flagellin hook IN motif
CLI98_RS06745	PF00669	Bacterial flagellin N-terminal helical region
CLI98_RS06745	PF00700	Bacterial flagellin C-terminal helical region
CLI98_RS06750	PF02599	Global regulator protein family
CLI98_RS06755	PF02623	FliW protein
CLI98_RS06765	PF00669	Bacterial flagellin N-terminal helical region
CLI98_RS06770	PF00460	Flagella basal body rod protein
CLI98_RS06770	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CLI98_RS06775	PF05130	FlgN protein
CLI98_RS06780	PF04316	Anti-sigma-28 factor, FlgM
CLI98_RS06790	PF00156	Phosphoribosyl transferase domain
CLI98_RS06795	PF10719	CLI98_RS06795
CLI98_RS06800	PF00271	Helicase conserved C-terminal domain
CLI98_RS06800	PF04851	Type III restriction enzyme, res subunit
CLI98_RS06805	PF02645	Uncharacterised protein, DegV family COG1307
CLI98_RS06810	PF00072	Response regulator receiver domain
CLI98_RS06810	PF00196	Bacterial regulatory proteins, luxR family
CLI98_RS06815	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS06815	PF05384	CLI98_RS06815
CLI98_RS06815	PF07730	Histidine kinase
CLI98_RS06820	PF01205	Uncharacterized protein family UPF0029
CLI98_RS06820	PF09186	Domain of unknown function (DUF1949)
CLI98_RS06825	PF03816	Cell envelope-related transcriptional attenuator domain
CLI98_RS06830	PF00953	Glycosyl transferase family 4
CLI98_RS06835	PF13692	Glycosyl transferases group 1
CLI98_RS06840	PF00535	Glycosyl transferase family 2
CLI98_RS06850	PF04932	CLI98_RS06850
CLI98_RS06855	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
CLI98_RS06855	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
CLI98_RS06855	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
CLI98_RS06860	PF00534	Glycosyl transferases group 1
CLI98_RS06860	PF13439	Glycosyltransferase Family 4
CLI98_RS06865	PF13440	CLI98_RS06865
CLI98_RS06870	PF02397	CLI98_RS06870
CLI98_RS06875	PF01520	N-acetylmuramoyl-L-alanine amidase
CLI98_RS06875	PF04122	CLI98_RS06875
CLI98_RS06880	PF04122	CLI98_RS06880
CLI98_RS06880	PF08486	CLI98_RS06880
CLI98_RS06890	PF03816	Cell envelope-related transcriptional attenuator domain
CLI98_RS06895	PF02350	UDP-N-acetylglucosamine 2-epimerase
CLI98_RS06900	PF00483	Nucleotidyl transferase
CLI98_RS06905	PF00005	ABC transporter
CLI98_RS06910	PF01061	CLI98_RS06910
CLI98_RS06915	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
CLI98_RS06920	PF00535	Glycosyl transferase family 2
CLI98_RS06925	PF01467	Cytidylyltransferase
CLI98_RS06930	PF03808	CLI98_RS06930
CLI98_RS06935	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
CLI98_RS06940	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CLI98_RS06940	PF05036	Sporulation related domain
CLI98_RS06940	PF08239	Bacterial SH3 domain
CLI98_RS06945	PF01238	Phosphomannose isomerase type I
CLI98_RS06950	PF03323	CLI98_RS06950
CLI98_RS06955	PF03845	CLI98_RS06955
CLI98_RS06960	PF05504	Spore germination B3/ GerAC like, C-terminal
CLI98_RS06965	PF00535	Glycosyl transferase family 2
CLI98_RS06965	PF13489	Methyltransferase domain
CLI98_RS06970	PF00083	Sugar (and other) transporter
CLI98_RS06975	PF03816	Cell envelope-related transcriptional attenuator domain
CLI98_RS06980	PF08282	haloacid dehalogenase-like hydrolase
CLI98_RS06990	PF00877	NlpC/P60 family
CLI98_RS07000	PF09587	Bacterial capsule synthesis protein PGA_cap
CLI98_RS07005	PF14102	CLI98_RS07005
CLI98_RS07010	PF08245	Mur ligase middle domain
CLI98_RS07020	PF03323	CLI98_RS07020
CLI98_RS07025	PF03845	CLI98_RS07025
CLI98_RS07030	PF05504	Spore germination B3/ GerAC like, C-terminal
CLI98_RS07035	PF00356	Bacterial regulatory proteins, lacI family
CLI98_RS07035	PF13377	Periplasmic binding protein-like domain
CLI98_RS07040	PF00294	pfkB family carbohydrate kinase
CLI98_RS07045	PF05025	RbsD / FucU transport protein family
CLI98_RS07050	PF00005	ABC transporter
CLI98_RS07055	PF02653	CLI98_RS07055
CLI98_RS07060	PF13407	Periplasmic binding protein domain
CLI98_RS07065	PF08239	Bacterial SH3 domain
CLI98_RS07070	PF02525	Flavodoxin-like fold
CLI98_RS07075	PF03306	Alpha-acetolactate decarboxylase
CLI98_RS07080	PF00205	Thiamine pyrophosphate enzyme, central domain
CLI98_RS07080	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CLI98_RS07080	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CLI98_RS07085	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CLI98_RS07085	PF03466	LysR substrate binding domain
CLI98_RS07090	PF02040	CLI98_RS07090
CLI98_RS07105	PF08757	CLI98_RS07105
CLI98_RS07115	PF01613	Flavin reductase like domain
CLI98_RS07120	PF13789	CLI98_RS07120
CLI98_RS07125	PF01019	Gamma-glutamyltranspeptidase
CLI98_RS07130	PF01037	AsnC family
CLI98_RS07130	PF13404	AsnC-type helix-turn-helix domain
CLI98_RS07135	PF02417	CLI98_RS07135
CLI98_RS07140	PF02417	CLI98_RS07140
CLI98_RS07150	PF03358	NADPH-dependent FMN reductase
CLI98_RS07155	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CLI98_RS07155	PF03466	LysR substrate binding domain
CLI98_RS07160	PF04493	Endonuclease V
CLI98_RS07190	PF04740	CLI98_RS07190
CLI98_RS07190	PF14449	CLI98_RS07190
CLI98_RS07195	PF17279	CLI98_RS07195
CLI98_RS07200	PF16888	CLI98_RS07200
CLI98_RS07205	PF09234	Domain of unknown function (DUF1963)
CLI98_RS07210	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
CLI98_RS07210	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
CLI98_RS07210	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
CLI98_RS07220	PF13614	AAA domain
CLI98_RS07225	PF02706	Chain length determinant protein
CLI98_RS07245	PF00176	SNF2 family N-terminal domain
CLI98_RS07245	PF00271	Helicase conserved C-terminal domain
CLI98_RS07245	PF12419	CLI98_RS07245
CLI98_RS07250	PF08282	haloacid dehalogenase-like hydrolase
CLI98_RS07255	PF00455	CLI98_RS07255
CLI98_RS07255	PF08220	DeoR-like helix-turn-helix domain
CLI98_RS07260	PF00436	Single-strand binding protein family
CLI98_RS07270	PF14183	CLI98_RS07270
CLI98_RS07275	PF01741	Large-conductance mechanosensitive channel, MscL
CLI98_RS07280	PF07977	FabA-like domain
CLI98_RS07285	PF13424	Tetratricopeptide repeat
CLI98_RS07290	PF00460	Flagella basal body rod protein
CLI98_RS07290	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CLI98_RS07295	PF00460	Flagella basal body rod protein
CLI98_RS07295	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CLI98_RS07300	PF06723	MreB/Mbl protein
CLI98_RS07305	PF12116	Stage III sporulation protein D
CLI98_RS07310	PF01047	MarR family
CLI98_RS07315	PF07690	Major Facilitator Superfamily
CLI98_RS07320	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
CLI98_RS07325	PF07690	Major Facilitator Superfamily
CLI98_RS07330	PF00857	Isochorismatase family
CLI98_RS07335	PF00909	Ammonium Transporter Family
CLI98_RS07340	PF00543	Nitrogen regulatory protein P-II
CLI98_RS07345	PF01098	CLI98_RS07345
CLI98_RS07350	PF01569	PAP2 superfamily
CLI98_RS07355	PF04892	CLI98_RS07355
CLI98_RS07360	PF01551	Peptidase family M23
CLI98_RS07365	PF00583	Acetyltransferase (GNAT) family
CLI98_RS07370	PF17319	CLI98_RS07370
CLI98_RS07375	PF17370	CLI98_RS07375
CLI98_RS07380	PF13091	PLD-like domain
CLI98_RS07380	PF13396	CLI98_RS07380
CLI98_RS07385	PF17319	CLI98_RS07385
CLI98_RS07390	PF00457	Glycosyl hydrolases family 11
CLI98_RS07400	PF02082	Transcriptional regulator
CLI98_RS07405	PF00449	Urease alpha-subunit, N-terminal domain
CLI98_RS07405	PF01979	Amidohydrolase family
CLI98_RS07410	PF00699	Urease beta subunit
CLI98_RS07415	PF00547	Urease, gamma subunit
CLI98_RS07420	PF05532	CsbD-like
CLI98_RS07430	PF12862	CLI98_RS07430
CLI98_RS07430	PF13424	Tetratricopeptide repeat
CLI98_RS07435	PF04055	Radical SAM superfamily
CLI98_RS07435	PF06463	Molybdenum Cofactor Synthesis C
CLI98_RS07435	PF13353	4Fe-4S single cluster domain
CLI98_RS07440	PF02634	FdhD/NarQ family
CLI98_RS07450	PF00092	von Willebrand factor type A domain
CLI98_RS07455	PF00092	von Willebrand factor type A domain
CLI98_RS07460	PF08486	CLI98_RS07460
CLI98_RS07465	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CLI98_RS07470	PF08680	Protein of unknown function (DUF1779)
CLI98_RS07475	PF06612	CLI98_RS07475
CLI98_RS07485	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
CLI98_RS07485	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
CLI98_RS07490	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CLI98_RS07490	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CLI98_RS07495	PF00231	ATP synthase
CLI98_RS07500	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CLI98_RS07500	PF00306	ATP synthase alpha/beta chain, C terminal domain
CLI98_RS07500	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CLI98_RS07505	PF00213	ATP synthase delta (OSCP) subunit
CLI98_RS07510	PF00430	ATP synthase B/B' CF(0)
CLI98_RS07515	PF00137	ATP synthase subunit C
CLI98_RS07520	PF00119	ATP synthase A chain
CLI98_RS07525	PF03899	CLI98_RS07525
CLI98_RS07530	PF14681	Uracil phosphoribosyltransferase
CLI98_RS07535	PF00464	Serine hydroxymethyltransferase
CLI98_RS07540	PF04260	Protein of unknown function (DUF436)
CLI98_RS07545	PF02502	Ribose/Galactose Isomerase
CLI98_RS07550	PF01451	Low molecular weight phosphotyrosine protein phosphatase
CLI98_RS07555	PF02659	CLI98_RS07555
CLI98_RS07560	PF01300	Telomere recombination
CLI98_RS07560	PF03481	Putative GTP-binding controlling metal-binding
CLI98_RS07570	PF09551	CLI98_RS07570
CLI98_RS07575	PF17094	CLI98_RS07575
CLI98_RS07580	PF17247	CLI98_RS07580
CLI98_RS07585	PF05175	Methyltransferase small domain
CLI98_RS07590	PF00472	RF-1 domain
CLI98_RS07590	PF03462	PCRF domain
CLI98_RS07595	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CLI98_RS07600	PF13411	MerR HTH family regulatory protein
CLI98_RS07605	PF03547	CLI98_RS07605
CLI98_RS07610	PF00390	Malic enzyme, N-terminal domain
CLI98_RS07610	PF03949	Malic enzyme, NAD binding domain
CLI98_RS07615	PF00265	Thymidine kinase
CLI98_RS07620	PF01197	Ribosomal protein L31
CLI98_RS07625	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CLI98_RS07625	PF07497	Rho termination factor, RNA-binding domain
CLI98_RS07625	PF07498	Rho termination factor, N-terminal domain
CLI98_RS07630	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
CLI98_RS07635	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CLI98_RS07640	PF00923	Transaldolase
CLI98_RS07645	PF01116	Fructose-bisphosphate aldolase class-II
CLI98_RS07650	PF00072	Response regulator receiver domain
CLI98_RS07655	PF10740	Protein of unknown function (DUF2529)
CLI98_RS07660	PF00117	Glutamine amidotransferase class-I
CLI98_RS07660	PF06418	CTP synthase N-terminus
CLI98_RS07665	PF05066	HB1, ASXL, restriction endonuclease HTH domain
CLI98_RS07670	PF02754	CLI98_RS07670
CLI98_RS07670	PF13183	4Fe-4S dicluster domain
CLI98_RS07675	PF13091	PLD-like domain
CLI98_RS07680	PF03851	UV-endonuclease UvdE
CLI98_RS07690	PF00005	ABC transporter
CLI98_RS07690	PF00664	ABC transporter transmembrane region
CLI98_RS07695	PF13091	PLD-like domain
CLI98_RS07695	PF13396	CLI98_RS07695
CLI98_RS07700	PF02588	CLI98_RS07700
CLI98_RS07705	PF02665	Nitrate reductase gamma subunit
CLI98_RS07710	PF02613	Nitrate reductase delta subunit
CLI98_RS07715	PF13247	4Fe-4S dicluster domain
CLI98_RS07715	PF14711	Respiratory nitrate reductase beta C-terminal
CLI98_RS07720	PF00384	Molybdopterin oxidoreductase
CLI98_RS07720	PF01568	Molydopterin dinucleotide binding domain
CLI98_RS07720	PF14710	Respiratory nitrate reductase alpha N-terminal
CLI98_RS07730	PF14256	CLI98_RS07730
CLI98_RS07735	PF00027	Cyclic nucleotide-binding domain
CLI98_RS07735	PF13545	Crp-like helix-turn-helix domain
CLI98_RS07740	PF07690	Major Facilitator Superfamily
CLI98_RS07745	PF00750	tRNA synthetases class I (R)
CLI98_RS07745	PF03485	Arginyl tRNA synthetase N terminal domain
CLI98_RS07745	PF05746	DALR anticodon binding domain
CLI98_RS07750	PF09148	Domain of unknown function (DUF1934)
CLI98_RS07755	PF13424	Tetratricopeptide repeat
CLI98_RS07760	PF11131	CLI98_RS07760
CLI98_RS07765	PF01381	Helix-turn-helix
CLI98_RS07775	PF13783	CLI98_RS07775
CLI98_RS07785	PF01944	CLI98_RS07785
CLI98_RS07795	PF00196	Bacterial regulatory proteins, luxR family
CLI98_RS07800	PF00491	Arginase family
CLI98_RS07805	PF01564	Spermine/spermidine synthase
CLI98_RS07805	PF17284	CLI98_RS07805
CLI98_RS07810	PF00905	Penicillin binding protein transpeptidase domain
CLI98_RS07810	PF00912	Transglycosylase
CLI98_RS07820	PF08741	CLI98_RS07820
CLI98_RS07825	PF02163	Peptidase family M50
CLI98_RS07830	PF01361	Tautomerase enzyme
CLI98_RS07835	PF01047	MarR family
CLI98_RS07840	PF13520	Amino acid permease
CLI98_RS07850	PF01966	HD domain
CLI98_RS07855	PF07293	CLI98_RS07855
CLI98_RS07865	PF03551	Transcriptional regulator PadR-like family
CLI98_RS07870	PF08006	CLI98_RS07870
CLI98_RS07875	PF00005	ABC transporter
CLI98_RS07880	PF12679	CLI98_RS07880
CLI98_RS07905	PF03099	Biotin/lipoate A/B protein ligase family
CLI98_RS07910	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CLI98_RS07910	PF03466	LysR substrate binding domain
CLI98_RS07915	PF03601	CLI98_RS07915
CLI98_RS07920	PF01515	Phosphate acetyl/butaryl transferase
CLI98_RS07925	PF06778	Chlorite dismutase
CLI98_RS07930	PF13561	Enoyl-(Acyl carrier protein) reductase
CLI98_RS07935	PF00155	Aminotransferase class I and II
CLI98_RS07940	PF07690	Major Facilitator Superfamily
CLI98_RS07945	PF13535	ATP-grasp domain
CLI98_RS07950	PF13561	Enoyl-(Acyl carrier protein) reductase
CLI98_RS07955	PF07883	Cupin domain
CLI98_RS07965	PF07690	Major Facilitator Superfamily
CLI98_RS07970	PF07690	Major Facilitator Superfamily
CLI98_RS07975	PF00324	Amino acid permease
CLI98_RS07980	PF01546	Peptidase family M20/M25/M40
CLI98_RS07985	PF00171	Aldehyde dehydrogenase family
CLI98_RS07990	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CLI98_RS07990	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
CLI98_RS07995	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS07995	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS08000	PF00072	Response regulator receiver domain
CLI98_RS08000	PF00486	Transcriptional regulatory protein, C terminal
CLI98_RS08005	PF13349	CLI98_RS08005
CLI98_RS08010	PF12730	CLI98_RS08010
CLI98_RS08015	PF00005	ABC transporter
CLI98_RS08020	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
CLI98_RS08025	PF04321	RmlD substrate binding domain
CLI98_RS08030	PF16363	CLI98_RS08030
CLI98_RS08035	PF00483	Nucleotidyl transferase
CLI98_RS08040	PF04101	Glycosyltransferase family 28 C-terminal domain
CLI98_RS08045	PF02348	Cytidylyltransferase
CLI98_RS08050	PF03102	NeuB family
CLI98_RS08050	PF08666	SAF domain
CLI98_RS08055	PF00583	Acetyltransferase (GNAT) family
CLI98_RS08060	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
CLI98_RS08065	PF05159	CLI98_RS08065
CLI98_RS08070	PF00535	Glycosyl transferase family 2
CLI98_RS08075	PF09671	CLI98_RS08075
CLI98_RS08080	PF04241	CLI98_RS08080
CLI98_RS08085	PF00860	Permease family
CLI98_RS08090	PF17261	CLI98_RS08090
CLI98_RS08095	PF03167	Uracil DNA glycosylase superfamily
CLI98_RS08100	PF00535	Glycosyl transferase family 2
CLI98_RS08115	PF03551	Transcriptional regulator PadR-like family
CLI98_RS08120	PF08543	Phosphomethylpyrimidine kinase
CLI98_RS08130	PF00251	Glycosyl hydrolases family 32 N-terminal domain
CLI98_RS08130	PF08244	Glycosyl hydrolases family 32 C terminal
CLI98_RS08135	PF00367	phosphotransferase system, EIIB
CLI98_RS08135	PF02378	Phosphotransferase system, EIIC
CLI98_RS08140	PF00874	PRD domain
CLI98_RS08140	PF03123	CAT RNA binding domain
CLI98_RS08150	PF00082	Subtilase family
CLI98_RS08150	PF02225	PA domain
CLI98_RS08150	PF05922	Peptidase inhibitor I9
CLI98_RS08150	PF13860	FlgD Ig-like domain
CLI98_RS08155	PF00296	Luciferase-like monooxygenase
CLI98_RS08160	PF00881	Nitroreductase family
CLI98_RS08165	PF01098	CLI98_RS08165
CLI98_RS08170	PF00583	Acetyltransferase (GNAT) family
CLI98_RS08175	PF17368	CLI98_RS08175
CLI98_RS08180	PF03626	CLI98_RS08180
CLI98_RS08185	PF00510	Cytochrome c oxidase subunit III
CLI98_RS08190	PF00115	Cytochrome C and Quinol oxidase polypeptide I
CLI98_RS08195	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
CLI98_RS08195	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
CLI98_RS08200	PF04226	CLI98_RS08200
CLI98_RS08205	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
CLI98_RS08205	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
CLI98_RS08210	PF00288	GHMP kinases N terminal domain
CLI98_RS08210	PF08544	GHMP kinases C terminal
CLI98_RS08210	PF10509	Galactokinase galactose-binding signature
CLI98_RS08215	PF04138	CLI98_RS08215
CLI98_RS08220	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS08225	PF08671	Anti-repressor SinI
CLI98_RS08230	PF13489	Methyltransferase domain
CLI98_RS08235	PF13712	Glycosyltransferase like family
CLI98_RS08240	PF01323	DSBA-like thioredoxin domain
CLI98_RS08245	PF04261	Dyp-type peroxidase family
CLI98_RS08245	PF10518	TAT (twin-arginine translocation) pathway signal sequence
CLI98_RS08255	PF02581	Thiamine monophosphate synthase/TENI
CLI98_RS08260	PF02110	Hydroxyethylthiazole kinase family
CLI98_RS08265	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CLI98_RS08265	PF03466	LysR substrate binding domain
CLI98_RS08270	PF03788	CLI98_RS08270
CLI98_RS08275	PF04172	CLI98_RS08275
CLI98_RS08280	PF09962	CLI98_RS08280
CLI98_RS08285	PF07739	TipAS antibiotic-recognition domain
CLI98_RS08285	PF13411	MerR HTH family regulatory protein
CLI98_RS08290	PF10026	CLI98_RS08290
CLI98_RS08295	PF10672	S-adenosylmethionine-dependent methyltransferase
CLI98_RS08300	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CLI98_RS08305	PF02378	Phosphotransferase system, EIIC
CLI98_RS08310	PF00082	Subtilase family
CLI98_RS08315	PF01501	Glycosyl transferase family 8
CLI98_RS08320	PF01047	MarR family
CLI98_RS08325	PF00579	tRNA synthetases class I (W and Y)
CLI98_RS08325	PF01479	S4 domain
CLI98_RS08330	PF04607	Region found in RelA / SpoT proteins
CLI98_RS08335	PF01040	UbiA prenyltransferase family
CLI98_RS08345	PF12459	CLI98_RS08345
CLI98_RS08350	PF00501	AMP-binding enzyme
CLI98_RS08350	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS08355	PF03062	CLI98_RS08355
CLI98_RS08360	PF00550	Phosphopantetheine attachment site
CLI98_RS08365	PF04914	DltD C-terminal region
CLI98_RS08370	PF01063	Aminotransferase class IV
CLI98_RS08375	PF02056	Family 4 glycosyl hydrolase
CLI98_RS08375	PF11975	Family 4 glycosyl hydrolase C-terminal domain
CLI98_RS08380	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
CLI98_RS08385	PF02378	Phosphotransferase system, EIIC
CLI98_RS08390	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CLI98_RS08395	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CLI98_RS08395	PF00874	PRD domain
CLI98_RS08395	PF05043	Mga helix-turn-helix domain
CLI98_RS08395	PF08279	HTH domain
CLI98_RS08400	PF02245	Methylpurine-DNA glycosylase (MPG)
CLI98_RS08410	PF01032	FecCD transport family
CLI98_RS08415	PF01032	FecCD transport family
CLI98_RS08420	PF01497	Periplasmic binding protein
CLI98_RS08425	PF01022	Bacterial regulatory protein, arsR family
CLI98_RS08430	PF02040	CLI98_RS08430
CLI98_RS08435	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CLI98_RS08440	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
CLI98_RS08445	PF02378	Phosphotransferase system, EIIC
CLI98_RS08450	PF00232	Glycosyl hydrolase family 1
CLI98_RS08455	PF00480	ROK family
CLI98_RS08460	PF01238	Phosphomannose isomerase type I
CLI98_RS08465	PF02156	Glycosyl hydrolase family 26
CLI98_RS08470	PF00199	Catalase
CLI98_RS08470	PF06628	Catalase-related immune-responsive
CLI98_RS08475	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
CLI98_RS08480	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
CLI98_RS08485	PF01256	Carbohydrate kinase
CLI98_RS08490	PF00005	ABC transporter
CLI98_RS08490	PF00664	ABC transporter transmembrane region
CLI98_RS08495	PF00005	ABC transporter
CLI98_RS08495	PF00664	ABC transporter transmembrane region
CLI98_RS08500	PF02322	CLI98_RS08500
CLI98_RS08505	PF01654	CLI98_RS08505
CLI98_RS08510	PF03390	CLI98_RS08510
CLI98_RS08515	PF01522	Polysaccharide deacetylase
CLI98_RS08520	PF00005	ABC transporter
CLI98_RS08520	PF03459	TOBE domain
CLI98_RS08525	PF13556	PucR C-terminal helix-turn-helix domain
CLI98_RS08530	PF02588	CLI98_RS08530
CLI98_RS08530	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CLI98_RS08535	PF11611	Domain of unknown function (DUF4352)
CLI98_RS08540	PF16363	CLI98_RS08540
CLI98_RS08545	PF01546	Peptidase family M20/M25/M40
CLI98_RS08545	PF07687	Peptidase dimerisation domain
CLI98_RS08550	PF04525	Tubby C 2
CLI98_RS08555	PF01717	Cobalamin-independent synthase, Catalytic domain
CLI98_RS08560	PF13649	Methyltransferase domain
CLI98_RS08565	PF01773	Na+ dependent nucleoside transporter N-terminus
CLI98_RS08565	PF07662	Na+ dependent nucleoside transporter C-terminus
CLI98_RS08570	PF11738	Protein of unknown function (DUF3298)
CLI98_RS08570	PF13739	Domain of unknown function (DUF4163)
CLI98_RS08585	PF00199	Catalase
CLI98_RS08585	PF01965	DJ-1/PfpI family
CLI98_RS08585	PF06628	Catalase-related immune-responsive
CLI98_RS08590	PF03600	Citrate transporter
CLI98_RS08595	PF00722	Glycosyl hydrolases family 16
CLI98_RS08600	PF00874	PRD domain
CLI98_RS08600	PF03123	CAT RNA binding domain
CLI98_RS08605	PF11700	CLI98_RS08605
CLI98_RS08610	PF00270	DEAD/DEAH box helicase
CLI98_RS08610	PF00271	Helicase conserved C-terminal domain
CLI98_RS08610	PF03880	DbpA RNA binding domain
CLI98_RS08625	PF14176	CLI98_RS08625
CLI98_RS08645	PF05593	CLI98_RS08645
CLI98_RS08650	PF00544	Pectate lyase
CLI98_RS08655	PF00892	EamA-like transporter family
CLI98_RS08660	PF00582	Universal stress protein family
CLI98_RS08670	PF00271	Helicase conserved C-terminal domain
CLI98_RS08670	PF04851	Type III restriction enzyme, res subunit
CLI98_RS08670	PF11907	CLI98_RS08670
CLI98_RS08670	PF13091	PLD-like domain
CLI98_RS08675	PF00293	NUDIX domain
CLI98_RS08680	PF04616	Glycosyl hydrolases family 43
CLI98_RS08680	PF16369	CLI98_RS08680
CLI98_RS08685	PF09021	HutP
CLI98_RS08690	PF00221	Aromatic amino acid lyase
CLI98_RS08695	PF01175	Urocanase
CLI98_RS08695	PF17391	CLI98_RS08695
CLI98_RS08695	PF17392	CLI98_RS08695
CLI98_RS08700	PF01979	Amidohydrolase family
CLI98_RS08705	PF00491	Arginase family
CLI98_RS08710	PF00324	Amino acid permease
CLI98_RS08715	PF00591	Glycosyl transferase family, a/b domain
CLI98_RS08715	PF02885	Glycosyl transferase family, helical bundle domain
CLI98_RS08715	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
CLI98_RS08720	PF01773	Na+ dependent nucleoside transporter N-terminus
CLI98_RS08720	PF07662	Na+ dependent nucleoside transporter C-terminus
CLI98_RS08725	PF01791	DeoC/LacD family aldolase
CLI98_RS08730	PF04198	Putative sugar-binding domain
CLI98_RS08730	PF12802	MarR family
CLI98_RS08735	PF08282	haloacid dehalogenase-like hydrolase
CLI98_RS08745	PF11631	Protein of unknown function (DUF3255)
CLI98_RS08765	PF01497	Periplasmic binding protein
CLI98_RS08770	PF06486	Protein of unknown function (DUF1093)
CLI98_RS08775	PF02687	CLI98_RS08775
CLI98_RS08780	PF00005	ABC transporter
CLI98_RS08785	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS08790	PF00072	Response regulator receiver domain
CLI98_RS08790	PF00486	Transcriptional regulatory protein, C terminal
CLI98_RS08795	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS08795	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS08800	PF00072	Response regulator receiver domain
CLI98_RS08800	PF00486	Transcriptional regulatory protein, C terminal
CLI98_RS08805	PF00005	ABC transporter
CLI98_RS08810	PF12730	CLI98_RS08810
CLI98_RS08815	PF12730	CLI98_RS08815
CLI98_RS08820	PF01116	Fructose-bisphosphate aldolase class-II
CLI98_RS08825	PF01261	Xylose isomerase-like TIM barrel
CLI98_RS08830	PF01261	Xylose isomerase-like TIM barrel
CLI98_RS08835	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CLI98_RS08835	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CLI98_RS08840	PF07690	Major Facilitator Superfamily
CLI98_RS08845	PF01261	Xylose isomerase-like TIM barrel
CLI98_RS08850	PF00205	Thiamine pyrophosphate enzyme, central domain
CLI98_RS08850	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CLI98_RS08850	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CLI98_RS08855	PF00294	pfkB family carbohydrate kinase
CLI98_RS08860	PF04962	KduI/IolB family
CLI98_RS08865	PF00171	Aldehyde dehydrogenase family
CLI98_RS08870	PF00455	CLI98_RS08870
CLI98_RS08870	PF08220	DeoR-like helix-turn-helix domain
CLI98_RS08875	PF00248	Aldo/keto reductase family
CLI98_RS08880	PF00083	Sugar (and other) transporter
CLI98_RS08885	PF00183	Hsp90 protein
CLI98_RS08885	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS08895	PF13561	Enoyl-(Acyl carrier protein) reductase
CLI98_RS08900	PF00072	Response regulator receiver domain
CLI98_RS08900	PF00196	Bacterial regulatory proteins, luxR family
CLI98_RS08905	PF07730	Histidine kinase
CLI98_RS08910	PF00487	CLI98_RS08910
CLI98_RS08920	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS08925	PF00171	Aldehyde dehydrogenase family
CLI98_RS08930	PF13360	PQQ-like domain
CLI98_RS08930	PF13570	PQQ-like domain
CLI98_RS08935	PF17369	CLI98_RS08935
CLI98_RS08945	PF07690	Major Facilitator Superfamily
CLI98_RS08950	PF06271	CLI98_RS08950
CLI98_RS08955	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CLI98_RS08960	PF01435	Peptidase family M48
CLI98_RS08965	PF04471	Restriction endonuclease
CLI98_RS08965	PF14338	CLI98_RS08965
CLI98_RS08970	PF00578	AhpC/TSA family
CLI98_RS08970	PF10417	C-terminal domain of 1-Cys peroxiredoxin
CLI98_RS08975	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CLI98_RS08975	PF13192	Thioredoxin domain
CLI98_RS08980	PF02661	Fic/DOC family
CLI98_RS08985	PF00324	Amino acid permease
CLI98_RS08990	PF06874	CLI98_RS08990
CLI98_RS08995	PF00111	2Fe-2S iron-sulfur cluster binding domain
CLI98_RS08995	PF01799	[2Fe-2S] binding domain
CLI98_RS09000	PF00941	FAD binding domain in molybdopterin dehydrogenase
CLI98_RS09005	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CLI98_RS09005	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
CLI98_RS09010	PF12804	MobA-like NTP transferase domain
CLI98_RS09015	PF02625	XdhC and CoxI family
CLI98_RS09015	PF13478	XdhC Rossmann domain
CLI98_RS09020	PF06081	CLI98_RS09020
CLI98_RS09035	PF01909	Nucleotidyltransferase domain
CLI98_RS09040	PF00805	Pentapeptide repeats (8 copies)
CLI98_RS09040	PF07885	Ion channel
CLI98_RS09050	PF02590	Predicted SPOUT methyltransferase
CLI98_RS09055	PF14116	CLI98_RS09055
CLI98_RS09075	PF00248	Aldo/keto reductase family
CLI98_RS09080	PF00583	Acetyltransferase (GNAT) family
CLI98_RS09090	PF00491	Arginase family
CLI98_RS09095	PF00324	Amino acid permease
CLI98_RS09100	PF00202	Aminotransferase class-III
CLI98_RS09105	PF07853	CLI98_RS09105
CLI98_RS09105	PF13630	CLI98_RS09105
CLI98_RS09110	PF01022	Bacterial regulatory protein, arsR family
CLI98_RS09115	PF00158	Sigma-54 interaction domain
CLI98_RS09115	PF02954	Bacterial regulatory protein, Fis family
CLI98_RS09115	PF13426	PAS domain
CLI98_RS09120	PF13621	Cupin-like domain
CLI98_RS09125	PF00005	ABC transporter
CLI98_RS09125	PF12848	ABC transporter
CLI98_RS09130	PF07690	Major Facilitator Superfamily
CLI98_RS09140	PF00899	ThiF family
CLI98_RS09145	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS09145	PF00672	HAMP domain
CLI98_RS09145	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS09150	PF00072	Response regulator receiver domain
CLI98_RS09150	PF00486	Transcriptional regulatory protein, C terminal
CLI98_RS09155	PF03413	Peptidase propeptide and YPEB domain
CLI98_RS09160	PF13180	PDZ domain
CLI98_RS09160	PF13365	Trypsin-like peptidase domain
CLI98_RS09165	PF00753	Metallo-beta-lactamase superfamily
CLI98_RS09170	PF09648	YycH protein
CLI98_RS09175	PF07435	YycH protein
CLI98_RS09180	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS09180	PF00672	HAMP domain
CLI98_RS09180	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS09180	PF13426	PAS domain
CLI98_RS09185	PF00072	Response regulator receiver domain
CLI98_RS09185	PF00486	Transcriptional regulatory protein, C terminal
CLI98_RS09215	PF00709	Adenylosuccinate synthetase
CLI98_RS09220	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CLI98_RS09225	PF00772	DnaB-like helicase N terminal domain
CLI98_RS09225	PF03796	DnaB-like helicase C terminal domain
CLI98_RS09230	PF09954	CLI98_RS09230
CLI98_RS09240	PF14174	CLI98_RS09240
CLI98_RS09245	PF13231	CLI98_RS09245
CLI98_RS09250	PF00534	Glycosyl transferases group 1
CLI98_RS09250	PF13579	Glycosyl transferase 4-like domain
CLI98_RS09255	PF02958	Ecdysteroid kinase
CLI98_RS09260	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CLI98_RS09265	PF00534	Glycosyl transferases group 1
CLI98_RS09265	PF13439	Glycosyltransferase Family 4
CLI98_RS09270	PF02585	GlcNAc-PI de-N-acetylase
CLI98_RS09280	PF01281	Ribosomal protein L9, N-terminal domain
CLI98_RS09280	PF03948	Ribosomal protein L9, C-terminal domain
CLI98_RS09285	PF01368	DHH family
CLI98_RS09285	PF02272	DHHA1 domain
CLI98_RS09290	PF09991	CLI98_RS09290
CLI98_RS09300	PF07875	CLI98_RS09300
CLI98_RS09305	PF01638	HxlR-like helix-turn-helix
CLI98_RS09310	PF01368	DHH family
CLI98_RS09310	PF02833	DHHA2 domain
CLI98_RS09315	PF00892	EamA-like transporter family
CLI98_RS09320	PF02435	Levansucrase/Invertase
CLI98_RS09325	PF00251	Glycosyl hydrolases family 32 N-terminal domain
CLI98_RS09325	PF08244	Glycosyl hydrolases family 32 C terminal
CLI98_RS09330	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS09330	PF07729	FCD domain
CLI98_RS09335	PF05163	DinB family
CLI98_RS09340	PF07690	Major Facilitator Superfamily
CLI98_RS09345	PF00892	EamA-like transporter family
CLI98_RS09350	PF06993	CLI98_RS09350
CLI98_RS09355	PF00881	Nitroreductase family
CLI98_RS09360	PF01047	MarR family
CLI98_RS09365	PF02588	CLI98_RS09365
CLI98_RS09365	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CLI98_RS09370	PF01047	MarR family
CLI98_RS09375	PF13673	Acetyltransferase (GNAT) domain
CLI98_RS09380	PF07485	CLI98_RS09380
CLI98_RS09385	PF13419	Haloacid dehalogenase-like hydrolase
CLI98_RS09390	PF00293	NUDIX domain
CLI98_RS09415	PF00082	Subtilase family
CLI98_RS09425	PF00155	Aminotransferase class I and II
CLI98_RS09425	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS09430	PF00892	EamA-like transporter family
CLI98_RS09435	PF01966	HD domain
CLI98_RS09440	PF16302	CLI98_RS09440
CLI98_RS09445	PF03190	Protein of unknown function, DUF255
CLI98_RS09445	PF07221	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
CLI98_RS09450	PF02517	CAAX protease self-immunity
CLI98_RS09455	PF00083	Sugar (and other) transporter
CLI98_RS09460	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CLI98_RS09465	PF00356	Bacterial regulatory proteins, lacI family
CLI98_RS09465	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
CLI98_RS09475	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
CLI98_RS09475	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
CLI98_RS09480	PF02805	Metal binding domain of Ada
CLI98_RS09480	PF12833	Helix-turn-helix domain
CLI98_RS09485	PF01084	Ribosomal protein S18
CLI98_RS09490	PF00436	Single-strand binding protein family
CLI98_RS09495	PF01250	Ribosomal protein S6
CLI98_RS09500	PF01926	50S ribosome-binding GTPase
CLI98_RS09500	PF06071	Protein of unknown function (DUF933)
CLI98_RS09505	PF00384	Molybdopterin oxidoreductase
CLI98_RS09505	PF01568	Molydopterin dinucleotide binding domain
CLI98_RS09505	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CLI98_RS09510	PF06107	CLI98_RS09510
CLI98_RS09525	PF06866	CLI98_RS09525
CLI98_RS09530	PF02195	ParB-like nuclease domain
CLI98_RS09535	PF13614	AAA domain
CLI98_RS09540	PF02195	ParB-like nuclease domain
CLI98_RS09545	PF02527	rRNA small subunit methyltransferase G
CLI98_RS09550	PF01134	Glucose inhibited division protein A
CLI98_RS09550	PF13932	GidA associated domain 3
CLI98_RS09555	PF01926	50S ribosome-binding GTPase
CLI98_RS09555	PF10396	GTP-binding protein TrmE N-terminus
CLI98_RS09555	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
CLI98_RS09560	PF01424	R3H domain
CLI98_RS09560	PF13083	KH domain
CLI98_RS09560	PF14804	Jag N-terminus
CLI98_RS09565	PF02096	60Kd inner membrane protein
CLI98_RS09570	PF00825	Ribonuclease P
CLI98_RS09575	PF00468	Ribosomal protein L34
CLI98_RS09580	PF00308	Bacterial dnaA  protein
CLI98_RS09580	PF08299	Bacterial dnaA protein helix-turn-helix
CLI98_RS09580	PF11638	DnaA N-terminal domain
CLI98_RS09585	PF00712	DNA polymerase III beta subunit, N-terminal domain
CLI98_RS09585	PF02767	DNA polymerase III beta subunit, central domain
CLI98_RS09585	PF02768	DNA polymerase III beta subunit, C-terminal domain
CLI98_RS09590	PF13275	S4 domain
CLI98_RS09595	PF02463	RecF/RecN/SMC N terminal domain
CLI98_RS09600	PF04025	CLI98_RS09600
CLI98_RS09605	PF00204	DNA gyrase B
CLI98_RS09605	PF00986	DNA gyrase B subunit, carboxyl terminus
CLI98_RS09605	PF01751	Toprim domain
CLI98_RS09605	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS09610	PF00521	DNA gyrase/topoisomerase IV, subunit A
CLI98_RS09610	PF03989	DNA gyrase C-terminal domain, beta-propeller
CLI98_RS09640	PF14175	CLI98_RS09640
CLI98_RS09645	PF00478	IMP dehydrogenase / GMP reductase domain
CLI98_RS09645	PF00571	CBS domain
CLI98_RS09650	PF00768	D-alanyl-D-alanine carboxypeptidase
CLI98_RS09650	PF07943	Penicillin-binding protein 5, C-terminal domain
CLI98_RS09655	PF01680	SOR/SNZ family
CLI98_RS09660	PF01174	SNO glutamine amidotransferase family
CLI98_RS09665	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CLI98_RS09665	PF02403	Seryl-tRNA synthetase N-terminal domain
CLI98_RS09670	PF02595	Glycerate kinase family
CLI98_RS09680	PF01712	Deoxynucleoside kinase
CLI98_RS09685	PF01712	Deoxynucleoside kinase
CLI98_RS09690	PF00704	Glycosyl hydrolases family 18
CLI98_RS09690	PF01476	LysM domain
CLI98_RS09695	PF00857	Isochorismatase family
CLI98_RS09700	PF14437	CLI98_RS09700
CLI98_RS09710	PF12169	DNA polymerase III subunits gamma and tau domain III
CLI98_RS09710	PF13177	DNA polymerase III, delta subunit
CLI98_RS09715	PF02575	YbaB/EbfC DNA-binding family
CLI98_RS09720	PF02132	RecR protein
CLI98_RS09720	PF13662	Toprim domain
CLI98_RS09725	PF10704	CLI98_RS09725
CLI98_RS09730	PF07441	CLI98_RS09730
CLI98_RS09760	PF10764	CLI98_RS09760
CLI98_RS09765	PF10112	CLI98_RS09765
CLI98_RS09770	PF05816	CLI98_RS09770
CLI98_RS09775	PF01276	Orn/Lys/Arg decarboxylase, major domain
CLI98_RS09775	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
CLI98_RS09780	PF02223	Thymidylate kinase
CLI98_RS09785	PF06153	Protein of unknown function (DUF970)
CLI98_RS09790	PF03885	Protein of unknown function (DUF327)
CLI98_RS09795	PF09115	DNA polymerase III, delta subunit, C terminal
CLI98_RS09795	PF13177	DNA polymerase III, delta subunit
CLI98_RS09800	PF04468	CLI98_RS09800
CLI98_RS09805	PF06156	CLI98_RS09805
CLI98_RS09810	PF05175	Methyltransferase small domain
CLI98_RS09815	PF01541	GIY-YIG catalytic domain
CLI98_RS09820	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CLI98_RS09825	PF04014	Antidote-toxin recognition MazE
CLI98_RS09830	PF01588	Putative tRNA binding domain
CLI98_RS09830	PF08264	Anticodon-binding domain of tRNA
CLI98_RS09830	PF09334	tRNA synthetases class I (M)
CLI98_RS09835	PF01026	TatD related DNase
CLI98_RS09840	PF03990	CLI98_RS09840
CLI98_RS09840	PF06725	3D domain
CLI98_RS09840	PF07501	G5 domain
CLI98_RS09845	PF13331	CLI98_RS09845
CLI98_RS09845	PF13662	Toprim domain
CLI98_RS09850	PF00398	Ribosomal RNA adenine dimethylase
CLI98_RS09855	PF05582	CLI98_RS09855
CLI98_RS09860	PF06257	Protein of unknown function (DUF1021)
CLI98_RS09865	PF00269	Small, acid-soluble spore proteins, alpha/beta type
CLI98_RS09870	PF00288	GHMP kinases N terminal domain
CLI98_RS09870	PF08544	GHMP kinases C terminal
CLI98_RS09875	PF00156	Phosphoribosyl transferase domain
CLI98_RS09875	PF09182	Bacterial purine repressor, N-terminal
CLI98_RS09880	PF01042	Endoribonuclease L-PSP
CLI98_RS09885	PF04026	SpoVG
CLI98_RS09890	PF00132	Bacterial transferase hexapeptide (six repeats)
CLI98_RS09890	PF00483	Nucleotidyl transferase
CLI98_RS09895	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
CLI98_RS09895	PF14572	Phosphoribosyl synthetase-associated domain
CLI98_RS09900	PF01386	Ribosomal L25p family
CLI98_RS09900	PF14693	Ribosomal protein TL5, C-terminal domain
CLI98_RS09905	PF01195	Peptidyl-tRNA hydrolase
CLI98_RS09910	PF10955	CLI98_RS09910
CLI98_RS09915	PF00270	DEAD/DEAH box helicase
CLI98_RS09915	PF00271	Helicase conserved C-terminal domain
CLI98_RS09915	PF02559	CarD-like/TRCF domain
CLI98_RS09915	PF03461	TRCF domain
CLI98_RS09920	PF04014	Antidote-toxin recognition MazE
CLI98_RS09920	PF15714	CLI98_RS09920
CLI98_RS09925	PF01943	CLI98_RS09925
CLI98_RS09925	PF14667	Polysaccharide biosynthesis C-terminal domain
CLI98_RS09930	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CLI98_RS09930	PF03819	MazG nucleotide pyrophosphohydrolase domain
CLI98_RS09935	PF01479	S4 domain
CLI98_RS09940	PF07873	YabP family
CLI98_RS09945	PF09578	CLI98_RS09945
CLI98_RS09950	PF04977	Septum formation initiator
CLI98_RS09955	PF00575	S1 RNA binding domain
CLI98_RS09970	PF07228	Stage II sporulation protein E (SpoIIE)
CLI98_RS09975	PF00092	von Willebrand factor type A domain
CLI98_RS09980	PF00069	Protein kinase domain
CLI98_RS09985	PF01171	PP-loop family
CLI98_RS09985	PF09179	TilS substrate binding domain
CLI98_RS09985	PF11734	TilS substrate C-terminal domain
CLI98_RS09990	PF00156	Phosphoribosyl transferase domain
CLI98_RS09995	PF00004	ATPase family associated with various cellular activities (AAA)
CLI98_RS09995	PF01434	Peptidase family M41
CLI98_RS09995	PF06480	FtsH Extracellular
CLI98_RS10000	PF03309	Type III pantothenate kinase
CLI98_RS10005	PF01430	Hsp33 protein
CLI98_RS10010	PF13145	PPIC-type PPIASE domain
CLI98_RS10015	PF00291	Pyridoxal-phosphate dependent enzyme
CLI98_RS10020	PF00425	chorismate binding enzyme
CLI98_RS10020	PF04715	Anthranilate synthase component I, N terminal region
CLI98_RS10025	PF00117	Glutamine amidotransferase class-I
CLI98_RS10030	PF01063	Aminotransferase class IV
CLI98_RS10035	PF00809	Pterin binding enzyme
CLI98_RS10040	PF02152	Dihydroneopterin aldolase
CLI98_RS10045	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
CLI98_RS10050	PF01381	Helix-turn-helix
CLI98_RS10055	PF01207	Dihydrouridine synthase (Dus)
CLI98_RS10060	PF00152	tRNA synthetases class II (D, K and N)
CLI98_RS10060	PF01336	OB-fold nucleic acid binding domain
CLI98_RS10140	PF05848	Firmicute transcriptional repressor of class III stress genes (CtsR)
CLI98_RS10145	PF02151	UvrB/uvrC motif
CLI98_RS10150	PF00217	ATP:guanido phosphotransferase, C-terminal catalytic domain
CLI98_RS10155	PF00004	ATPase family associated with various cellular activities (AAA)
CLI98_RS10155	PF02151	UvrB/uvrC motif
CLI98_RS10155	PF02861	Clp amino terminal domain
CLI98_RS10155	PF07724	AAA domain (Cdc48 subfamily)
CLI98_RS10155	PF10431	C-terminal, D2-small domain, of ClpB protein
CLI98_RS10160	PF13481	AAA domain
CLI98_RS10160	PF13541	Subunit ChlI of Mg-chelatase
CLI98_RS10165	PF02457	DisA bacterial checkpoint controller nucleotide-binding
CLI98_RS10165	PF10635	DisA bacterial checkpoint controller linker region
CLI98_RS10175	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
CLI98_RS10180	PF02542	YgbB family
CLI98_RS10185	PF00749	tRNA synthetases class I (E and Q), catalytic domain
CLI98_RS10190	PF00132	Bacterial transferase hexapeptide (six repeats)
CLI98_RS10190	PF06426	Serine acetyltransferase, N-terminal
CLI98_RS10195	PF01406	tRNA synthetases class I (C) catalytic domain
CLI98_RS10195	PF09190	DALR domain
CLI98_RS10200	PF00636	Ribonuclease III domain
CLI98_RS10205	PF00588	SpoU rRNA Methylase family
CLI98_RS10205	PF08032	RNA 2'-O ribose methyltransferase substrate binding
CLI98_RS10210	PF05991	CLI98_RS10210
CLI98_RS10215	PF04542	Sigma-70 region 2
CLI98_RS10215	PF08281	Sigma-70, region 4
CLI98_RS10220	PF00471	Ribosomal protein L33
CLI98_RS10225	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
CLI98_RS10230	PF00467	KOW motif
CLI98_RS10230	PF02357	Transcription termination factor nusG
CLI98_RS10235	PF00298	Ribosomal protein L11, RNA binding domain
CLI98_RS10235	PF03946	Ribosomal protein L11, N-terminal domain
CLI98_RS10240	PF00687	Ribosomal protein L1p/L10e family
CLI98_RS10245	PF00466	Ribosomal protein L10
CLI98_RS10250	PF00542	Ribosomal protein L7/L12 C-terminal domain
CLI98_RS10250	PF16320	CLI98_RS10250
CLI98_RS10255	PF05175	Methyltransferase small domain
CLI98_RS10260	PF00562	RNA polymerase Rpb2, domain 6
CLI98_RS10260	PF04560	RNA polymerase Rpb2, domain 7
CLI98_RS10260	PF04561	RNA polymerase Rpb2, domain 2
CLI98_RS10260	PF04563	RNA polymerase beta subunit
CLI98_RS10260	PF04565	RNA polymerase Rpb2, domain 3
CLI98_RS10260	PF10385	RNA polymerase beta subunit external 1 domain
CLI98_RS10265	PF00623	RNA polymerase Rpb1, domain 2
CLI98_RS10265	PF04983	RNA polymerase Rpb1, domain 3
CLI98_RS10265	PF04997	RNA polymerase Rpb1, domain 1
CLI98_RS10265	PF04998	RNA polymerase Rpb1, domain 5
CLI98_RS10265	PF05000	RNA polymerase Rpb1, domain 4
CLI98_RS10270	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
CLI98_RS10275	PF00164	Ribosomal protein S12/S23
CLI98_RS10280	PF00177	Ribosomal protein S7p/S5e
CLI98_RS10285	PF00009	Elongation factor Tu GTP binding domain
CLI98_RS10285	PF00679	Elongation factor G C-terminus
CLI98_RS10285	PF03144	Elongation factor Tu domain 2
CLI98_RS10285	PF03764	Elongation factor G, domain IV
CLI98_RS10285	PF14492	Elongation Factor G, domain II
CLI98_RS10290	PF00009	Elongation factor Tu GTP binding domain
CLI98_RS10290	PF03143	Elongation factor Tu C-terminal domain
CLI98_RS10290	PF03144	Elongation factor Tu domain 2
CLI98_RS10295	PF12146	Putative lysophospholipase
CLI98_RS10300	PF00338	Ribosomal protein S10p/S20e
CLI98_RS10305	PF00297	Ribosomal protein L3
CLI98_RS10310	PF00573	Ribosomal protein L4/L1 family
CLI98_RS10315	PF00276	Ribosomal protein L23
CLI98_RS10320	PF00181	Ribosomal Proteins L2, RNA binding domain
CLI98_RS10320	PF03947	Ribosomal Proteins L2, C-terminal domain
CLI98_RS10325	PF00203	Ribosomal protein S19
CLI98_RS10330	PF00237	Ribosomal protein L22p/L17e
CLI98_RS10335	PF00189	Ribosomal protein S3, C-terminal domain
CLI98_RS10335	PF07650	KH domain
CLI98_RS10340	PF00252	Ribosomal protein L16p/L10e
CLI98_RS10345	PF00831	Ribosomal L29 protein
CLI98_RS10350	PF00366	Ribosomal protein S17
CLI98_RS10355	PF00238	Ribosomal protein L14p/L23e
CLI98_RS10360	PF00467	KOW motif
CLI98_RS10360	PF17136	CLI98_RS10360
CLI98_RS10365	PF00281	Ribosomal protein L5
CLI98_RS10365	PF00673	ribosomal L5P family C-terminus
CLI98_RS10370	PF00253	Ribosomal protein S14p/S29e
CLI98_RS10375	PF00410	Ribosomal protein S8
CLI98_RS10380	PF00347	Ribosomal protein L6
CLI98_RS10385	PF00861	Ribosomal L18p/L5e family
CLI98_RS10390	PF00333	Ribosomal protein S5, N-terminal domain
CLI98_RS10390	PF03719	Ribosomal protein S5, C-terminal domain
CLI98_RS10395	PF00327	Ribosomal protein L30p/L7e
CLI98_RS10400	PF00828	Ribosomal protein L18e/L15
CLI98_RS10405	PF00344	SecY translocase
CLI98_RS10410	PF00406	Adenylate kinase
CLI98_RS10410	PF05191	Adenylate kinase, active site lid
CLI98_RS10415	PF00557	Metallopeptidase family M24
CLI98_RS10420	PF01176	Translation initiation factor 1A / IF-1
CLI98_RS10425	PF00444	Ribosomal protein L36
CLI98_RS10430	PF00416	Ribosomal protein S13/S18
CLI98_RS10435	PF00411	Ribosomal protein S11
CLI98_RS10440	PF01000	RNA polymerase Rpb3/RpoA insert domain
CLI98_RS10440	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
CLI98_RS10440	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
CLI98_RS10445	PF01196	Ribosomal protein L17
CLI98_RS10450	PF00005	ABC transporter
CLI98_RS10455	PF00005	ABC transporter
CLI98_RS10460	PF02361	Cobalt transport protein
CLI98_RS10465	PF01416	tRNA pseudouridine synthase
CLI98_RS10470	PF00572	Ribosomal protein L13
CLI98_RS10475	PF00380	Ribosomal protein S9/S16
CLI98_RS10480	PF08241	Methyltransferase domain
CLI98_RS10485	PF05163	DinB family
CLI98_RS10490	PF10730	CLI98_RS10490
CLI98_RS10495	PF01520	N-acetylmuramoyl-L-alanine amidase
CLI98_RS10500	PF10609	ParA/MinD ATPase like
CLI98_RS10510	PF14089	CLI98_RS10510
CLI98_RS10515	PF01522	Polysaccharide deacetylase
CLI98_RS10575	PF07690	Major Facilitator Superfamily
CLI98_RS10580	PF00202	Aminotransferase class-III
CLI98_RS10585	PF00459	Inositol monophosphatase family
CLI98_RS10590	PF00107	Zinc-binding dehydrogenase
CLI98_RS10590	PF08240	Alcohol dehydrogenase GroES-like domain
CLI98_RS10595	PF00916	CLI98_RS10595
CLI98_RS10595	PF01740	STAS domain
CLI98_RS10600	PF01758	Sodium Bile acid symporter family
CLI98_RS10610	PF01032	FecCD transport family
CLI98_RS10615	PF01032	FecCD transport family
CLI98_RS10620	PF01497	Periplasmic binding protein
CLI98_RS10625	PF01497	Periplasmic binding protein
CLI98_RS10625	PF12833	Helix-turn-helix domain
CLI98_RS10630	PF07075	Protein of unknown function (DUF1343)
CLI98_RS10635	PF00933	Glycosyl hydrolase family 3 N terminal domain
CLI98_RS10635	PF01915	Glycosyl hydrolase family 3 C-terminal domain
CLI98_RS10640	PF00144	Beta-lactamase
CLI98_RS10645	PF00367	phosphotransferase system, EIIB
CLI98_RS10645	PF02378	Phosphotransferase system, EIIC
CLI98_RS10650	PF01380	SIS domain
CLI98_RS10655	PF00583	Acetyltransferase (GNAT) family
CLI98_RS10660	PF04463	CLI98_RS10660
CLI98_RS10690	PF04542	Sigma-70 region 2
CLI98_RS10690	PF08281	Sigma-70, region 4
CLI98_RS10695	PF13490	Putative zinc-finger
CLI98_RS10700	PF02457	DisA bacterial checkpoint controller nucleotide-binding
CLI98_RS10705	PF07949	YbbR-like protein
CLI98_RS10710	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CLI98_RS10710	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CLI98_RS10710	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CLI98_RS10710	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CLI98_RS10715	PF01380	SIS domain
CLI98_RS10715	PF13522	Glutamine amidotransferase domain
CLI98_RS10720	PF00005	ABC transporter
CLI98_RS10725	PF13346	CLI98_RS10725
CLI98_RS10735	PF16226	CLI98_RS10735
CLI98_RS10740	PF00248	Aldo/keto reductase family
CLI98_RS10745	PF04172	CLI98_RS10745
CLI98_RS10750	PF03788	CLI98_RS10750
CLI98_RS10755	PF01047	MarR family
CLI98_RS10760	PF00324	Amino acid permease
CLI98_RS10765	PF13419	Haloacid dehalogenase-like hydrolase
CLI98_RS10770	PF07730	Histidine kinase
CLI98_RS10775	PF00072	Response regulator receiver domain
CLI98_RS10775	PF00196	Bacterial regulatory proteins, luxR family
CLI98_RS10780	PF00005	ABC transporter
CLI98_RS10785	PF12698	ABC-2 family transporter protein
CLI98_RS10790	PF12698	ABC-2 family transporter protein
CLI98_RS10800	PF16219	CLI98_RS10800
CLI98_RS10805	PF17334	CLI98_RS10805
CLI98_RS10820	PF13520	Amino acid permease
CLI98_RS10835	PF10852	CLI98_RS10835
CLI98_RS10840	PF03009	Glycerophosphoryl diester phosphodiesterase family
CLI98_RS10845	PF07690	Major Facilitator Superfamily
CLI98_RS10855	PF10852	CLI98_RS10855
CLI98_RS10860	PF03241	4-hydroxyphenylacetate 3-hydroxylase C terminal
CLI98_RS10860	PF11794	4-hydroxyphenylacetate 3-hydroxylase N terminal
CLI98_RS10870	PF01471	Putative peptidoglycan binding domain
CLI98_RS10870	PF08924	Domain of unknown function (DUF1906)
CLI98_RS10880	PF01381	Helix-turn-helix
CLI98_RS10885	PF00465	Iron-containing alcohol dehydrogenase
CLI98_RS10890	PF02222	ATP-grasp domain
CLI98_RS10895	PF01066	CDP-alcohol phosphatidyltransferase
CLI98_RS10900	PF09335	CLI98_RS10900
CLI98_RS10905	PF02666	CLI98_RS10905
CLI98_RS10915	PF00581	Rhodanese-like domain
CLI98_RS10915	PF12368	CLI98_RS10915
CLI98_RS10920	PF00375	Sodium:dicarboxylate symporter family
CLI98_RS10925	PF01063	Aminotransferase class IV
CLI98_RS10930	PF00324	Amino acid permease
CLI98_RS10935	PF02574	Homocysteine S-methyltransferase
CLI98_RS10940	PF01235	CLI98_RS10940
CLI98_RS10945	PF04960	Glutaminase
CLI98_RS10950	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS10955	PF00072	Response regulator receiver domain
CLI98_RS10955	PF08664	CLI98_RS10955
CLI98_RS10960	PF01636	Phosphotransferase enzyme family
CLI98_RS10965	PF15777	CLI98_RS10965
CLI98_RS10970	PF10710	CLI98_RS10970
CLI98_RS10980	PF07486	Cell Wall Hydrolase
CLI98_RS10990	PF09423	PhoD-like phosphatase
CLI98_RS10990	PF16655	CLI98_RS10990
CLI98_RS10995	PF02416	mttA/Hcf106 family
CLI98_RS11000	PF00902	Sec-independent protein translocase protein (TatC)
CLI98_RS11005	PF01470	Pyroglutamyl peptidase
CLI98_RS11010	PF00266	Aminotransferase class-V
CLI98_RS11015	PF07690	Major Facilitator Superfamily
CLI98_RS11020	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS11025	PF00710	Asparaginase
CLI98_RS11030	PF01674	Lipase (class 2)
CLI98_RS11035	PF02810	SEC-C motif
CLI98_RS11035	PF05225	helix-turn-helix, Psq domain
CLI98_RS11040	PF00248	Aldo/keto reductase family
CLI98_RS11045	PF11611	Domain of unknown function (DUF4352)
CLI98_RS11045	PF17118	CLI98_RS11045
CLI98_RS11050	PF16244	CLI98_RS11050
CLI98_RS11055	PF16244	CLI98_RS11055
CLI98_RS11060	PF13539	D-alanyl-D-alanine carboxypeptidase
CLI98_RS11065	PF13424	Tetratricopeptide repeat
CLI98_RS11070	PF13561	Enoyl-(Acyl carrier protein) reductase
CLI98_RS11075	PF05977	Transmembrane secretion effector
CLI98_RS11080	PF00128	Alpha amylase, catalytic domain
CLI98_RS11085	PF01297	Periplasmic solute binding protein family
CLI98_RS11090	PF00005	ABC transporter
CLI98_RS11095	PF00950	CLI98_RS11095
CLI98_RS11100	PF00296	Luciferase-like monooxygenase
CLI98_RS11105	PF02342	TerD domain
CLI98_RS11110	PF02342	TerD domain
CLI98_RS11115	PF02342	TerD domain
CLI98_RS11120	PF03741	CLI98_RS11120
CLI98_RS11125	PF14266	CLI98_RS11125
CLI98_RS11130	PF05816	CLI98_RS11130
CLI98_RS11135	PF07690	Major Facilitator Superfamily
CLI98_RS11140	PF00005	ABC transporter
CLI98_RS11140	PF00571	CBS domain
CLI98_RS11145	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS11150	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
CLI98_RS11155	PF01546	Peptidase family M20/M25/M40
CLI98_RS11155	PF07687	Peptidase dimerisation domain
CLI98_RS11160	PF03606	CLI98_RS11160
CLI98_RS11170	PF00128	Alpha amylase, catalytic domain
CLI98_RS11170	PF16738	CLI98_RS11170
CLI98_RS11175	PF00056	lactate/malate dehydrogenase, NAD binding domain
CLI98_RS11175	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CLI98_RS11180	PF07690	Major Facilitator Superfamily
CLI98_RS11185	PF01047	MarR family
CLI98_RS11190	PF01810	CLI98_RS11190
CLI98_RS11195	PF08892	CLI98_RS11195
CLI98_RS11200	PF00324	Amino acid permease
CLI98_RS11205	PF09347	Domain of unknown function (DUF1989)
CLI98_RS11210	PF02540	NAD synthase
CLI98_RS11215	PF12197	Bacillus cereus group antimicrobial protein
CLI98_RS11220	PF13238	AAA domain
CLI98_RS11225	PF01261	Xylose isomerase-like TIM barrel
CLI98_RS11230	PF07690	Major Facilitator Superfamily
CLI98_RS11235	PF01202	Shikimate kinase
CLI98_RS11240	PF08241	Methyltransferase domain
CLI98_RS11245	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CLI98_RS11245	PF03466	LysR substrate binding domain
CLI98_RS11250	PF05448	Acetyl xylan esterase (AXE1)
CLI98_RS11255	PF10127	CLI98_RS11255
CLI98_RS11260	PF01619	Proline dehydrogenase
CLI98_RS11265	PF00171	Aldehyde dehydrogenase family
CLI98_RS11270	PF00474	Sodium:solute symporter family
CLI98_RS11275	PF13556	PucR C-terminal helix-turn-helix domain
CLI98_RS11280	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CLI98_RS11285	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CLI98_RS11290	PF00355	Rieske [2Fe-2S] domain
CLI98_RS11295	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
CLI98_RS11295	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
CLI98_RS11295	PF04324	BFD-like [2Fe-2S] binding domain
CLI98_RS11295	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CLI98_RS11300	PF00384	Molybdopterin oxidoreductase
CLI98_RS11300	PF01568	Molydopterin dinucleotide binding domain
CLI98_RS11300	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CLI98_RS11305	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
CLI98_RS11305	PF04324	BFD-like [2Fe-2S] binding domain
CLI98_RS11305	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CLI98_RS11310	PF07690	Major Facilitator Superfamily
CLI98_RS11315	PF02492	CobW/HypB/UreG, nucleotide-binding domain
CLI98_RS11315	PF07683	Cobalamin synthesis protein cobW C-terminal domain
CLI98_RS11320	PF00107	Zinc-binding dehydrogenase
CLI98_RS11320	PF08240	Alcohol dehydrogenase GroES-like domain
CLI98_RS11320	PF13823	Alcohol dehydrogenase GroES-associated
CLI98_RS11325	PF06271	CLI98_RS11325
CLI98_RS11330	PF10925	CLI98_RS11330
CLI98_RS11335	PF00232	Glycosyl hydrolase family 1
CLI98_RS11340	PF11033	Competence protein J (ComJ)
CLI98_RS11345	PF14040	CLI98_RS11345
CLI98_RS11350	PF01380	SIS domain
CLI98_RS11355	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
CLI98_RS11360	PF01638	HxlR-like helix-turn-helix
CLI98_RS11370	PF00501	AMP-binding enzyme
CLI98_RS11370	PF00550	Phosphopantetheine attachment site
CLI98_RS11370	PF00668	Condensation domain
CLI98_RS11370	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS11375	PF00501	AMP-binding enzyme
CLI98_RS11375	PF00550	Phosphopantetheine attachment site
CLI98_RS11375	PF00668	Condensation domain
CLI98_RS11375	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS11380	PF00501	AMP-binding enzyme
CLI98_RS11380	PF00550	Phosphopantetheine attachment site
CLI98_RS11380	PF00668	Condensation domain
CLI98_RS11380	PF00975	Thioesterase domain
CLI98_RS11380	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS11385	PF00975	Thioesterase domain
CLI98_RS11390	PF00155	Aminotransferase class I and II
CLI98_RS11395	PF01648	4'-phosphopantetheinyl transferase superfamily
CLI98_RS11405	PF00005	ABC transporter
CLI98_RS11410	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS11415	PF00497	Bacterial extracellular solute-binding proteins, family 3
CLI98_RS11420	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CLI98_RS11420	PF03466	LysR substrate binding domain
CLI98_RS11425	PF02441	Flavoprotein
CLI98_RS11430	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
CLI98_RS11445	PF00854	POT family
CLI98_RS11450	PF13229	Right handed beta helix region
CLI98_RS11460	PF03323	CLI98_RS11460
CLI98_RS11465	PF05504	Spore germination B3/ GerAC like, C-terminal
CLI98_RS11470	PF03845	CLI98_RS11470
CLI98_RS11475	PF00296	Luciferase-like monooxygenase
CLI98_RS11480	PF00583	Acetyltransferase (GNAT) family
CLI98_RS11485	PF00497	Bacterial extracellular solute-binding proteins, family 3
CLI98_RS11490	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS11495	PF00005	ABC transporter
CLI98_RS11500	PF01546	Peptidase family M20/M25/M40
CLI98_RS11500	PF07687	Peptidase dimerisation domain
CLI98_RS11505	PF03972	MmgE/PrpD family
CLI98_RS11510	PF00005	ABC transporter
CLI98_RS11515	PF02687	CLI98_RS11515
CLI98_RS11515	PF12704	MacB-like periplasmic core domain
CLI98_RS11520	PF00072	Response regulator receiver domain
CLI98_RS11520	PF00486	Transcriptional regulatory protein, C terminal
CLI98_RS11525	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS11525	PF00672	HAMP domain
CLI98_RS11525	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS11530	PF13424	Tetratricopeptide repeat
CLI98_RS11535	PF11131	CLI98_RS11535
CLI98_RS11540	PF09680	CLI98_RS11540
CLI98_RS11545	PF00696	Amino acid kinase family
CLI98_RS11545	PF13840	ACT domain
CLI98_RS11550	PF01032	FecCD transport family
CLI98_RS11555	PF01032	FecCD transport family
CLI98_RS11560	PF00005	ABC transporter
CLI98_RS11565	PF01497	Periplasmic binding protein
CLI98_RS11570	PF07690	Major Facilitator Superfamily
CLI98_RS11575	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS11580	PF00881	Nitroreductase family
CLI98_RS11585	PF03992	Antibiotic biosynthesis monooxygenase
CLI98_RS11590	PF01022	Bacterial regulatory protein, arsR family
CLI98_RS11595	PF00155	Aminotransferase class I and II
CLI98_RS11595	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS11600	PF00202	Aminotransferase class-III
CLI98_RS11605	PF00171	Aldehyde dehydrogenase family
CLI98_RS11610	PF06800	CLI98_RS11610
CLI98_RS11615	PF13561	Enoyl-(Acyl carrier protein) reductase
CLI98_RS11620	PF07987	Domain of unkown function (DUF1775)
CLI98_RS11625	PF04234	CopC domain
CLI98_RS11625	PF05425	CLI98_RS11625
CLI98_RS11625	PF13115	CLI98_RS11625
CLI98_RS11630	PF08220	DeoR-like helix-turn-helix domain
CLI98_RS11640	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CLI98_RS11640	PF02378	Phosphotransferase system, EIIC
CLI98_RS11645	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CLI98_RS11650	PF01232	Mannitol dehydrogenase Rossmann domain
CLI98_RS11650	PF08125	Mannitol dehydrogenase C-terminal domain
CLI98_RS11655	PF07977	FabA-like domain
CLI98_RS11665	PF08282	haloacid dehalogenase-like hydrolase
CLI98_RS11670	PF03746	LamB/YcsF family
CLI98_RS11675	PF01566	CLI98_RS11675
CLI98_RS11680	PF07286	Protein of unknown function (DUF1445)
CLI98_RS11685	PF02682	Allophanate hydrolase subunit 1
CLI98_RS11690	PF02626	Allophanate hydrolase subunit 2
CLI98_RS11695	PF01614	Bacterial transcriptional regulator
CLI98_RS11695	PF09339	IclR helix-turn-helix domain
CLI98_RS11700	PF13472	GDSL-like Lipase/Acylhydrolase family
CLI98_RS11705	PF13129	CLI98_RS11705
CLI98_RS11710	PF03992	Antibiotic biosynthesis monooxygenase
CLI98_RS11715	PF00905	Penicillin binding protein transpeptidase domain
CLI98_RS11715	PF03717	Penicillin-binding Protein dimerisation domain
CLI98_RS11715	PF05223	NTF2-like N-terminal transpeptidase domain
CLI98_RS11720	PF00248	Aldo/keto reductase family
CLI98_RS11725	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CLI98_RS11725	PF00874	PRD domain
CLI98_RS11725	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CLI98_RS11725	PF05043	Mga helix-turn-helix domain
CLI98_RS11725	PF08279	HTH domain
CLI98_RS11730	PF00501	AMP-binding enzyme
CLI98_RS11730	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS11735	PF13561	Enoyl-(Acyl carrier protein) reductase
CLI98_RS11740	PF07385	Protein of unknown function (DUF1498)
CLI98_RS11745	PF13302	Acetyltransferase (GNAT) domain
CLI98_RS11750	PF16242	CLI98_RS11750
CLI98_RS11755	PF10997	CLI98_RS11755
CLI98_RS11760	PF12823	CLI98_RS11760
CLI98_RS11765	PF01037	AsnC family
CLI98_RS11765	PF13404	AsnC-type helix-turn-helix domain
CLI98_RS11770	PF01131	DNA topoisomerase
CLI98_RS11770	PF01751	Toprim domain
CLI98_RS11780	PF00990	GGDEF domain
CLI98_RS11785	PF10096	CLI98_RS11785
CLI98_RS11790	PF13641	Glycosyltransferase like family 2
CLI98_RS11795	PF03170	Bacterial cellulose synthase subunit
CLI98_RS11800	PF13520	Amino acid permease
CLI98_RS11805	PF00293	NUDIX domain
CLI98_RS11810	PF00205	Thiamine pyrophosphate enzyme, central domain
CLI98_RS11810	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CLI98_RS11810	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CLI98_RS11815	PF01471	Putative peptidoglycan binding domain
CLI98_RS11815	PF01476	LysM domain
CLI98_RS11830	PF09346	SMI1 / KNR4 family (SUKH-1)
CLI98_RS11870	PF01566	CLI98_RS11870
CLI98_RS11890	PF17314	CLI98_RS11890
CLI98_RS11895	PF00893	Small Multidrug Resistance protein
CLI98_RS11900	PF12787	CLI98_RS11900
CLI98_RS11905	PF00477	CLI98_RS11905
CLI98_RS11910	PF07883	Cupin domain
CLI98_RS11915	PF16291	CLI98_RS11915
CLI98_RS11920	PF05067	Manganese containing catalase
CLI98_RS11925	PF03480	Bacterial extracellular solute-binding protein, family 7
CLI98_RS11930	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS11930	PF13596	PAS domain
CLI98_RS11930	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
CLI98_RS11930	PF17203	CLI98_RS11930
CLI98_RS11935	PF00072	Response regulator receiver domain
CLI98_RS11935	PF04703	FaeA-like protein
CLI98_RS11940	PF00375	Sodium:dicarboxylate symporter family
CLI98_RS11945	PF01594	CLI98_RS11945
CLI98_RS11950	PF00005	ABC transporter
CLI98_RS11955	PF12730	CLI98_RS11955
CLI98_RS11965	PF02770	Acyl-CoA dehydrogenase, middle domain
CLI98_RS11965	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
CLI98_RS11965	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
CLI98_RS11970	PF13040	CLI98_RS11970
CLI98_RS11975	PF13076	CLI98_RS11975
CLI98_RS11980	PF01545	Cation efflux family
CLI98_RS11980	PF16916	CLI98_RS11980
CLI98_RS11985	PF00085	Thioredoxin
CLI98_RS11990	PF01820	D-ala D-ala ligase N-terminus
CLI98_RS11990	PF07478	D-ala D-ala ligase C-terminus
CLI98_RS11995	PF01225	Mur ligase family, catalytic domain
CLI98_RS11995	PF02875	Mur ligase family, glutamate ligase domain
CLI98_RS11995	PF08245	Mur ligase middle domain
CLI98_RS12000	PF00270	DEAD/DEAH box helicase
CLI98_RS12000	PF00271	Helicase conserved C-terminal domain
CLI98_RS12005	PF03703	CLI98_RS12005
CLI98_RS12010	PF03703	CLI98_RS12010
CLI98_RS12015	PF01694	Rhomboid family
CLI98_RS12020	PF01648	4'-phosphopantetheinyl transferase superfamily
CLI98_RS12030	PF00842	Alanine racemase, C-terminal domain
CLI98_RS12030	PF01168	Alanine racemase, N-terminal domain
CLI98_RS12035	PF01402	Ribbon-helix-helix protein, copG family
CLI98_RS12040	PF02452	PemK-like protein
CLI98_RS12045	PF01740	STAS domain
CLI98_RS12045	PF08678	Rsbr N terminal
CLI98_RS12050	PF01740	STAS domain
CLI98_RS12055	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS12060	PF07228	Stage II sporulation protein E (SpoIIE)
CLI98_RS12060	PF08673	Phosphoserine phosphatase RsbU, N-terminal domain
CLI98_RS12065	PF01740	STAS domain
CLI98_RS12070	PF13581	Histidine kinase-like ATPase domain
CLI98_RS12075	PF04539	Sigma-70 region 3
CLI98_RS12075	PF04542	Sigma-70 region 2
CLI98_RS12075	PF04545	Sigma-70, region 4
CLI98_RS12080	PF07228	Stage II sporulation protein E (SpoIIE)
CLI98_RS12085	PF00575	S1 RNA binding domain
CLI98_RS12085	PF09371	Tex-like protein N-terminal domain
CLI98_RS12085	PF12836	Helix-hairpin-helix motif
CLI98_RS12085	PF16921	CLI98_RS12085
CLI98_RS12095	PF10263	CLI98_RS12095
CLI98_RS12140	PF02028	BCCT family transporter
CLI98_RS12145	PF07690	Major Facilitator Superfamily
CLI98_RS12165	PF01575	MaoC like domain
CLI98_RS12170	PF04237	YjbR
CLI98_RS12180	PF02082	Transcriptional regulator
CLI98_RS12185	PF13460	NADH(P)-binding
CLI98_RS12190	PF07690	Major Facilitator Superfamily
CLI98_RS12195	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS12200	PF00487	CLI98_RS12200
CLI98_RS12205	PF02613	Nitrate reductase delta subunit
CLI98_RS12210	PF00313	'Cold-shock' DNA-binding domain
CLI98_RS12215	PF02559	CarD-like/TRCF domain
CLI98_RS12220	PF02583	Metal-sensitive transcriptional repressor
CLI98_RS12225	PF13686	DsrE/DsrF/DrsH-like family
CLI98_RS12230	PF00581	Rhodanese-like domain
CLI98_RS12235	PF00581	Rhodanese-like domain
CLI98_RS12235	PF01206	Sulfurtransferase TusA
CLI98_RS12245	PF01206	Sulfurtransferase TusA
CLI98_RS12250	PF01925	CLI98_RS12250
CLI98_RS12255	PF01177	Asp/Glu/Hydantoin racemase
CLI98_RS12260	PF11193	CLI98_RS12260
CLI98_RS12265	PF03551	Transcriptional regulator PadR-like family
CLI98_RS12270	PF01734	Patatin-like phospholipase
CLI98_RS12275	PF12867	DinB superfamily
CLI98_RS12280	PF00291	Pyridoxal-phosphate dependent enzyme
CLI98_RS12285	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS12285	PF07729	FCD domain
CLI98_RS12290	PF01042	Endoribonuclease L-PSP
CLI98_RS12300	PF01546	Peptidase family M20/M25/M40
CLI98_RS12300	PF07687	Peptidase dimerisation domain
CLI98_RS12305	PF02311	AraC-like ligand binding domain
CLI98_RS12305	PF12833	Helix-turn-helix domain
CLI98_RS12310	PF01546	Peptidase family M20/M25/M40
CLI98_RS12310	PF07687	Peptidase dimerisation domain
CLI98_RS12315	PF00155	Aminotransferase class I and II
CLI98_RS12315	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS12320	PF07690	Major Facilitator Superfamily
CLI98_RS12325	PF00293	NUDIX domain
CLI98_RS12340	PF01565	FAD binding domain
CLI98_RS12340	PF08031	Berberine and berberine like
CLI98_RS12350	PF01545	Cation efflux family
CLI98_RS12350	PF16916	CLI98_RS12350
CLI98_RS12355	PF13738	Pyridine nucleotide-disulphide oxidoreductase
CLI98_RS12365	PF07883	Cupin domain
CLI98_RS12370	PF04978	Protein of unknown function (DUF664)
CLI98_RS12375	PF00701	Dihydrodipicolinate synthetase family
CLI98_RS12385	PF04055	Radical SAM superfamily
CLI98_RS12395	PF01758	Sodium Bile acid symporter family
CLI98_RS12400	PF00107	Zinc-binding dehydrogenase
CLI98_RS12400	PF08240	Alcohol dehydrogenase GroES-like domain
CLI98_RS12405	PF13411	MerR HTH family regulatory protein
CLI98_RS12410	PF03553	CLI98_RS12410
CLI98_RS12415	PF00155	Aminotransferase class I and II
CLI98_RS12415	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS12420	PF04299	Putative FMN-binding domain
CLI98_RS12430	PF07690	Major Facilitator Superfamily
CLI98_RS12435	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS12435	PF16859	CLI98_RS12435
CLI98_RS12440	PF00892	EamA-like transporter family
CLI98_RS12445	PF00155	Aminotransferase class I and II
CLI98_RS12445	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS12450	PF07875	CLI98_RS12450
CLI98_RS12460	PF00107	Zinc-binding dehydrogenase
CLI98_RS12460	PF08240	Alcohol dehydrogenase GroES-like domain
CLI98_RS12460	PF13823	Alcohol dehydrogenase GroES-associated
CLI98_RS12465	PF07875	CLI98_RS12465
CLI98_RS12475	PF07690	Major Facilitator Superfamily
CLI98_RS12480	PF00480	ROK family
CLI98_RS12485	PF12464	Maltose acetyltransferase
CLI98_RS12495	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS12495	PF07730	Histidine kinase
CLI98_RS12500	PF00072	Response regulator receiver domain
CLI98_RS12500	PF00196	Bacterial regulatory proteins, luxR family
CLI98_RS12505	PF03176	MMPL family
CLI98_RS12510	PF07722	Peptidase C26
CLI98_RS12515	PF00005	ABC transporter
CLI98_RS12515	PF12848	ABC transporter
CLI98_RS12520	PF13302	Acetyltransferase (GNAT) domain
CLI98_RS12525	PF02588	CLI98_RS12525
CLI98_RS12525	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CLI98_RS12530	PF00465	Iron-containing alcohol dehydrogenase
CLI98_RS12535	PF07690	Major Facilitator Superfamily
CLI98_RS12540	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS12540	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS12545	PF13560	Helix-turn-helix domain
CLI98_RS12550	PF01925	CLI98_RS12550
CLI98_RS12555	PF00583	Acetyltransferase (GNAT) family
CLI98_RS12560	PF13411	MerR HTH family regulatory protein
CLI98_RS12565	PF00892	EamA-like transporter family
CLI98_RS12570	PF00293	NUDIX domain
CLI98_RS12570	PF12535	Hydrolase of X-linked nucleoside diphosphate N terminal
CLI98_RS12575	PF08241	Methyltransferase domain
CLI98_RS12580	PF00180	Isocitrate/isopropylmalate dehydrogenase
CLI98_RS12585	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS12585	PF07729	FCD domain
CLI98_RS12590	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
CLI98_RS12605	PF00144	Beta-lactamase
CLI98_RS12610	PF07563	Protein of unknown function (DUF1541)
CLI98_RS12615	PF07690	Major Facilitator Superfamily
CLI98_RS12620	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS12620	PF07702	UTRA domain
CLI98_RS12625	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS12625	PF07729	FCD domain
CLI98_RS12630	PF07690	Major Facilitator Superfamily
CLI98_RS12635	PF00893	Small Multidrug Resistance protein
CLI98_RS12640	PF00893	Small Multidrug Resistance protein
CLI98_RS12645	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS12650	PF13520	Amino acid permease
CLI98_RS12655	PF05067	Manganese containing catalase
CLI98_RS12660	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
CLI98_RS12665	PF00107	Zinc-binding dehydrogenase
CLI98_RS12665	PF08240	Alcohol dehydrogenase GroES-like domain
CLI98_RS12670	PF00083	Sugar (and other) transporter
CLI98_RS12710	PF00586	AIR synthase related protein, N-terminal domain
CLI98_RS12710	PF02769	AIR synthase related protein, C-terminal domain
CLI98_RS12715	PF02367	Uncharacterised P-loop hydrolase UPF0079
CLI98_RS12720	PF00814	Glycoprotease family
CLI98_RS12725	PF00583	Acetyltransferase (GNAT) family
CLI98_RS12730	PF00814	Glycoprotease family
CLI98_RS12735	PF00005	ABC transporter
CLI98_RS12735	PF12848	ABC transporter
CLI98_RS12735	PF16326	CLI98_RS12735
CLI98_RS12740	PF01967	MoaC family
CLI98_RS12745	PF02629	CoA binding domain
CLI98_RS12745	PF06971	Putative DNA-binding protein N-terminus
CLI98_RS12750	PF02416	mttA/Hcf106 family
CLI98_RS12755	PF00902	Sec-independent protein translocase protein (TatC)
CLI98_RS12760	PF14146	CLI98_RS12760
CLI98_RS12765	PF02517	CAAX protease self-immunity
CLI98_RS12770	PF00166	Chaperonin 10 Kd subunit
CLI98_RS12775	PF00118	TCP-1/cpn60 chaperonin family
CLI98_RS12780	PF01471	Putative peptidoglycan binding domain
CLI98_RS12780	PF08924	Domain of unknown function (DUF1906)
CLI98_RS12800	PF00931	NB-ARC domain
CLI98_RS12800	PF13181	Tetratricopeptide repeat
CLI98_RS12805	PF00107	Zinc-binding dehydrogenase
CLI98_RS12805	PF08240	Alcohol dehydrogenase GroES-like domain
CLI98_RS12810	PF13347	MFS/sugar transport protein
CLI98_RS12815	PF00294	pfkB family carbohydrate kinase
CLI98_RS12820	PF14154	CLI98_RS12820
CLI98_RS12825	PF04012	CLI98_RS12825
CLI98_RS12830	PF08271	TFIIB zinc-binding
CLI98_RS12835	PF04536	TLP18
CLI98_RS12840	PF13248	CLI98_RS12840
CLI98_RS12840	PF13421	CLI98_RS12840
CLI98_RS12845	PF01757	CLI98_RS12845
CLI98_RS12850	PF11738	Protein of unknown function (DUF3298)
CLI98_RS12850	PF13739	Domain of unknown function (DUF4163)
CLI98_RS12855	PF04542	Sigma-70 region 2
CLI98_RS12855	PF08281	Sigma-70, region 4
CLI98_RS12860	PF00107	Zinc-binding dehydrogenase
CLI98_RS12860	PF08240	Alcohol dehydrogenase GroES-like domain
CLI98_RS12865	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
CLI98_RS12870	PF07676	WD40-like Beta Propeller Repeat
CLI98_RS12875	PF14169	CLI98_RS12875
CLI98_RS12880	PF00394	Multicopper oxidase
CLI98_RS12880	PF07731	Multicopper oxidase
CLI98_RS12880	PF07732	Multicopper oxidase
CLI98_RS12885	PF00324	Amino acid permease
CLI98_RS12890	PF01545	Cation efflux family
CLI98_RS12890	PF16916	CLI98_RS12890
CLI98_RS12895	PF07726	ATPase family associated with various cellular activities (AAA)
CLI98_RS12900	PF01882	CLI98_RS12900
CLI98_RS12905	PF01841	Transglutaminase-like superfamily
CLI98_RS12905	PF13559	CLI98_RS12905
CLI98_RS12910	PF00117	Glutamine amidotransferase class-I
CLI98_RS12910	PF00958	GMP synthase C terminal domain
CLI98_RS12910	PF02540	NAD synthase
CLI98_RS12915	PF13535	ATP-grasp domain
CLI98_RS12920	PF13535	ATP-grasp domain
CLI98_RS12925	PF13714	Phosphoenolpyruvate phosphomutase
CLI98_RS12930	PF00155	Aminotransferase class I and II
CLI98_RS12935	PF07690	Major Facilitator Superfamily
CLI98_RS12940	PF04542	Sigma-70 region 2
CLI98_RS12940	PF08281	Sigma-70, region 4
CLI98_RS12945	PF13786	Domain of unknown function (DUF4179)
CLI98_RS12950	PF00860	Permease family
CLI98_RS12960	PF13076	CLI98_RS12960
CLI98_RS12965	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CLI98_RS12970	PF14044	CLI98_RS12970
CLI98_RS12975	PF00731	AIR carboxylase
CLI98_RS12980	PF02222	ATP-grasp domain
CLI98_RS12980	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
CLI98_RS12985	PF00206	Lyase
CLI98_RS12985	PF10397	Adenylosuccinate lyase C-terminus
CLI98_RS12990	PF01259	SAICAR synthetase
CLI98_RS12995	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
CLI98_RS13000	PF13507	CobB/CobQ-like glutamine amidotransferase domain
CLI98_RS13005	PF00586	AIR synthase related protein, N-terminal domain
CLI98_RS13005	PF02769	AIR synthase related protein, C-terminal domain
CLI98_RS13010	PF00156	Phosphoribosyl transferase domain
CLI98_RS13010	PF13522	Glutamine amidotransferase domain
CLI98_RS13015	PF00586	AIR synthase related protein, N-terminal domain
CLI98_RS13015	PF02769	AIR synthase related protein, C-terminal domain
CLI98_RS13020	PF00551	Formyl transferase
CLI98_RS13025	PF01808	AICARFT/IMPCHase bienzyme
CLI98_RS13025	PF02142	MGS-like domain
CLI98_RS13030	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
CLI98_RS13030	PF02843	Phosphoribosylglycinamide synthetase, C domain
CLI98_RS13030	PF02844	Phosphoribosylglycinamide synthetase, N domain
CLI98_RS13035	PF11127	Protein of unknown function (DUF2892)
CLI98_RS13040	PF01979	Amidohydrolase family
CLI98_RS13040	PF13382	Adenine deaminase C-terminal domain
CLI98_RS13045	PF11258	Protein of unknown function (DUF3048)
CLI98_RS13045	PF17479	CLI98_RS13045
CLI98_RS13050	PF01371	Trp repressor protein
CLI98_RS13055	PF01645	Conserved region in glutamate synthase
CLI98_RS13065	PF01884	PcrB family
CLI98_RS13070	PF00580	UvrD/REP helicase N-terminal domain
CLI98_RS13070	PF13361	UvrD-like helicase C-terminal domain
CLI98_RS13075	PF00533	BRCA1 C Terminus (BRCT) domain
CLI98_RS13075	PF01653	NAD-dependent DNA ligase adenylation domain
CLI98_RS13075	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
CLI98_RS13075	PF03120	NAD-dependent DNA ligase OB-fold domain
CLI98_RS13075	PF12826	Helix-hairpin-helix motif
CLI98_RS13075	PF14520	Helix-hairpin-helix domain
CLI98_RS13080	PF07537	CamS sex pheromone cAM373 precursor
CLI98_RS13085	PF01636	Phosphotransferase enzyme family
CLI98_RS13090	PF02308	CLI98_RS13090
CLI98_RS13095	PF00474	Sodium:solute symporter family
CLI98_RS13100	PF02686	Glu-tRNAGln amidotransferase C subunit
CLI98_RS13105	PF01425	Amidase
CLI98_RS13110	PF02637	GatB domain
CLI98_RS13110	PF02934	GatB/GatE catalytic domain
CLI98_RS13115	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS13120	PF00873	AcrB/AcrD/AcrF family
CLI98_RS13125	PF00781	Diacylglycerol kinase catalytic domain
CLI98_RS13130	PF01938	TRAM domain
CLI98_RS13130	PF05958	tRNA (Uracil-5-)-methyltransferase
CLI98_RS13135	PF14350	CLI98_RS13135
CLI98_RS13150	PF06114	Domain of unknown function (DUF955)
CLI98_RS13160	PF03691	CLI98_RS13160
CLI98_RS13165	PF04634	Protein of unknown function, DUF600
CLI98_RS13170	PF04634	Protein of unknown function, DUF600
CLI98_RS13175	PF04634	Protein of unknown function, DUF600
CLI98_RS13185	PF14112	CLI98_RS13185
CLI98_RS13200	PF04740	CLI98_RS13200
CLI98_RS13205	PF01709	Transcriptional regulator
CLI98_RS13215	PF04439	Streptomycin adenylyltransferase
CLI98_RS13220	PF11007	CLI98_RS13220
CLI98_RS13225	PF12652	CLI98_RS13225
CLI98_RS13230	PF05067	Manganese containing catalase
CLI98_RS13235	PF00583	Acetyltransferase (GNAT) family
CLI98_RS13240	PF14150	CLI98_RS13240
CLI98_RS13245	PF04239	Protein of unknown function (DUF421)
CLI98_RS13250	PF03992	Antibiotic biosynthesis monooxygenase
CLI98_RS13255	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CLI98_RS13265	PF01740	STAS domain
CLI98_RS13270	PF10055	CLI98_RS13270
CLI98_RS13280	PF01027	Inhibitor of apoptosis-promoting Bax1
CLI98_RS13285	PF01047	MarR family
CLI98_RS13290	PF01494	FAD binding domain
CLI98_RS13295	PF13037	CLI98_RS13295
CLI98_RS13295	PF13039	CLI98_RS13295
CLI98_RS13300	PF00067	Cytochrome P450
CLI98_RS13300	PF00175	Oxidoreductase NAD-binding domain
CLI98_RS13300	PF00258	Flavodoxin
CLI98_RS13300	PF00667	FAD binding domain
CLI98_RS13310	PF13601	Winged helix DNA-binding domain
CLI98_RS13315	PF00005	ABC transporter
CLI98_RS13320	PF01061	CLI98_RS13320
CLI98_RS13330	PF00884	Sulfatase
CLI98_RS13335	PF00483	Nucleotidyl transferase
CLI98_RS13340	PF16363	CLI98_RS13340
CLI98_RS13345	PF03407	CLI98_RS13345
CLI98_RS13350	PF00535	Glycosyl transferase family 2
CLI98_RS13355	PF03407	CLI98_RS13355
CLI98_RS13360	PF07690	Major Facilitator Superfamily
CLI98_RS13365	PF13520	Amino acid permease
CLI98_RS13370	PF00171	Aldehyde dehydrogenase family
CLI98_RS13375	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CLI98_RS13380	PF13561	Enoyl-(Acyl carrier protein) reductase
CLI98_RS13385	PF00535	Glycosyl transferase family 2
CLI98_RS13390	PF00005	ABC transporter
CLI98_RS13390	PF12848	ABC transporter
CLI98_RS13390	PF16326	CLI98_RS13390
CLI98_RS13395	PF13411	MerR HTH family regulatory protein
CLI98_RS13400	PF07690	Major Facilitator Superfamily
CLI98_RS13405	PF00005	ABC transporter
CLI98_RS13405	PF12848	ABC transporter
CLI98_RS13410	PF00270	DEAD/DEAH box helicase
CLI98_RS13410	PF00271	Helicase conserved C-terminal domain
CLI98_RS13415	PF00583	Acetyltransferase (GNAT) family
CLI98_RS13420	PF00107	Zinc-binding dehydrogenase
CLI98_RS13420	PF16884	CLI98_RS13420
CLI98_RS13425	PF11486	Protein of unknown function (DUF3212)
CLI98_RS13430	PF11181	CLI98_RS13430
CLI98_RS13435	PF00544	Pectate lyase
CLI98_RS13440	PF00939	Sodium:sulfate symporter transmembrane region
CLI98_RS13445	PF01391	Collagen triple helix repeat (20 copies)
CLI98_RS13450	PF01391	Collagen triple helix repeat (20 copies)
CLI98_RS13455	PF01391	Collagen triple helix repeat (20 copies)
CLI98_RS13460	PF00072	Response regulator receiver domain
CLI98_RS13460	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS13460	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS13460	PF06580	CLI98_RS13460
CLI98_RS13460	PF07695	CLI98_RS13460
CLI98_RS13465	PF00072	Response regulator receiver domain
CLI98_RS13465	PF00486	Transcriptional regulatory protein, C terminal
CLI98_RS13470	PF00746	CLI98_RS13470
CLI98_RS13470	PF05737	Collagen binding domain
CLI98_RS13475	PF04203	Sortase family
CLI98_RS13480	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS13480	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
CLI98_RS13480	PF17203	CLI98_RS13480
CLI98_RS13485	PF00072	Response regulator receiver domain
CLI98_RS13485	PF08279	HTH domain
CLI98_RS13490	PF03401	Tripartite tricarboxylate transporter family receptor
CLI98_RS13495	PF03600	Citrate transporter
CLI98_RS13500	PF00753	Metallo-beta-lactamase superfamily
CLI98_RS13505	PF02898	Nitric oxide synthase, oxygenase domain
CLI98_RS13510	PF00708	Acylphosphatase
CLI98_RS13515	PF03473	MOSC domain
CLI98_RS13515	PF03475	3-alpha domain
CLI98_RS13520	PF11121	CLI98_RS13520
CLI98_RS13530	PF11588	Protein of unknown function (DUF3243)
CLI98_RS13535	PF00557	Metallopeptidase family M24
CLI98_RS13540	PF00367	phosphotransferase system, EIIB
CLI98_RS13540	PF02378	Phosphotransferase system, EIIC
CLI98_RS13545	PF10787	CLI98_RS13545
CLI98_RS13550	PF00884	Sulfatase
CLI98_RS13555	PF09350	CLI98_RS13555
CLI98_RS13560	PF00011	Hsp20/alpha crystallin family
CLI98_RS13565	PF10676	CLI98_RS13565
CLI98_RS13570	PF10676	CLI98_RS13570
CLI98_RS13575	PF00367	phosphotransferase system, EIIB
CLI98_RS13575	PF02378	Phosphotransferase system, EIIC
CLI98_RS13580	PF00128	Alpha amylase, catalytic domain
CLI98_RS13580	PF16657	CLI98_RS13580
CLI98_RS13585	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS13585	PF07702	UTRA domain
CLI98_RS13590	PF00881	Nitroreductase family
CLI98_RS13595	PF07907	CLI98_RS13595
CLI98_RS13600	PF07907	CLI98_RS13600
CLI98_RS13605	PF00149	Calcineurin-like phosphoesterase
CLI98_RS13605	PF02872	5'-nucleotidase, C-terminal domain
CLI98_RS13610	PF01965	DJ-1/PfpI family
CLI98_RS13615	PF00356	Bacterial regulatory proteins, lacI family
CLI98_RS13615	PF13377	Periplasmic binding protein-like domain
CLI98_RS13620	PF08501	Shikimate dehydrogenase substrate binding domain
CLI98_RS13625	PF01487	Type I 3-dehydroquinase
CLI98_RS13630	PF07690	Major Facilitator Superfamily
CLI98_RS13635	PF06569	CLI98_RS13635
CLI98_RS13640	PF01451	Low molecular weight phosphotyrosine protein phosphatase
CLI98_RS13650	PF03631	CLI98_RS13650
CLI98_RS13655	PF07690	Major Facilitator Superfamily
CLI98_RS13660	PF01699	Sodium/calcium exchanger protein
CLI98_RS13665	PF14167	CLI98_RS13665
CLI98_RS13670	PF00924	Mechanosensitive ion channel
CLI98_RS13675	PF04055	Radical SAM superfamily
CLI98_RS13675	PF08756	CLI98_RS13675
CLI98_RS13675	PF13353	4Fe-4S single cluster domain
CLI98_RS13685	PF01522	Polysaccharide deacetylase
CLI98_RS13690	PF00005	ABC transporter
CLI98_RS13695	PF12730	CLI98_RS13695
CLI98_RS13700	PF01569	PAP2 superfamily
CLI98_RS13705	PF00072	Response regulator receiver domain
CLI98_RS13705	PF00486	Transcriptional regulatory protein, C terminal
CLI98_RS13710	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS13710	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS13715	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
CLI98_RS13715	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
CLI98_RS13725	PF01544	CorA-like Mg2+ transporter protein
CLI98_RS13730	PF00730	HhH-GPD superfamily base excision DNA repair protein
CLI98_RS13735	PF01938	TRAM domain
CLI98_RS13735	PF05958	tRNA (Uracil-5-)-methyltransferase
CLI98_RS13745	PF14118	CLI98_RS13745
CLI98_RS13755	PF01207	Dihydrouridine synthase (Dus)
CLI98_RS13765	PF00676	Dehydrogenase E1 component
CLI98_RS13770	PF02779	Transketolase, pyrimidine binding domain
CLI98_RS13770	PF02780	Transketolase, C-terminal domain
CLI98_RS13775	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CLI98_RS13775	PF00364	Biotin-requiring enzyme
CLI98_RS13775	PF02817	e3 binding domain
CLI98_RS13780	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CLI98_RS13780	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CLI98_RS13785	PF00158	Sigma-54 interaction domain
CLI98_RS13785	PF01590	GAF domain
CLI98_RS13785	PF02954	Bacterial regulatory protein, Fis family
CLI98_RS13790	PF08141	CLI98_RS13790
CLI98_RS13795	PF02056	Family 4 glycosyl hydrolase
CLI98_RS13795	PF11975	Family 4 glycosyl hydrolase C-terminal domain
CLI98_RS13800	PF01380	SIS domain
CLI98_RS13800	PF01418	Helix-turn-helix domain, rpiR family
CLI98_RS13805	PF00367	phosphotransferase system, EIIB
CLI98_RS13805	PF02378	Phosphotransferase system, EIIC
CLI98_RS13810	PF00005	ABC transporter
CLI98_RS13810	PF00664	ABC transporter transmembrane region
CLI98_RS13815	PF00005	ABC transporter
CLI98_RS13815	PF00664	ABC transporter transmembrane region
CLI98_RS13820	PF07681	CLI98_RS13820
CLI98_RS13825	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CLI98_RS13830	PF01040	UbiA prenyltransferase family
CLI98_RS13835	PF03551	Transcriptional regulator PadR-like family
CLI98_RS13835	PF10400	Virulence activator alpha C-term
CLI98_RS13840	PF02525	Flavodoxin-like fold
CLI98_RS13845	PF01757	CLI98_RS13845
CLI98_RS13850	PF00391	PEP-utilising enzyme, mobile domain
CLI98_RS13850	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
CLI98_RS13855	PF01337	Barstar (barnase inhibitor)
CLI98_RS13860	PF12867	DinB superfamily
CLI98_RS13865	PF07690	Major Facilitator Superfamily
CLI98_RS13870	PF01047	MarR family
CLI98_RS13875	PF03706	CLI98_RS13875
CLI98_RS13875	PF09924	Uncharacterized conserved protein (DUF2156)
CLI98_RS13880	PF02567	Phenazine biosynthesis-like protein
CLI98_RS13885	PF00881	Nitroreductase family
CLI98_RS13890	PF14151	CLI98_RS13890
CLI98_RS13895	PF14152	CLI98_RS13895
CLI98_RS13900	PF01370	NAD dependent epimerase/dehydratase family
CLI98_RS13900	PF08338	Domain of unknown function (DUF1731)
CLI98_RS13905	PF02631	RecX family
CLI98_RS13910	PF08838	Protein of unknown function (DUF1811)
CLI98_RS13915	PF07690	Major Facilitator Superfamily
CLI98_RS13920	PF10794	CLI98_RS13920
CLI98_RS13925	PF00089	Trypsin
CLI98_RS13930	PF08176	CLI98_RS13930
CLI98_RS13935	PF14043	CLI98_RS13935
CLI98_RS13940	PF08239	Bacterial SH3 domain
CLI98_RS13945	PF13630	CLI98_RS13945
CLI98_RS13950	PF00561	alpha/beta hydrolase fold
CLI98_RS13955	PF00535	Glycosyl transferase family 2
CLI98_RS13960	PF09586	CLI98_RS13960
CLI98_RS13965	PF04307	CLI98_RS13965
CLI98_RS13970	PF00730	HhH-GPD superfamily base excision DNA repair protein
CLI98_RS13970	PF14815	NUDIX domain
CLI98_RS13980	PF13561	Enoyl-(Acyl carrier protein) reductase
CLI98_RS13985	PF04259	CLI98_RS13985
CLI98_RS13990	PF14182	CLI98_RS13990
CLI98_RS13995	PF04167	Protein of unknown function (DUF402)
CLI98_RS14000	PF00005	ABC transporter
CLI98_RS14000	PF00664	ABC transporter transmembrane region
CLI98_RS14005	PF06081	CLI98_RS14005
CLI98_RS14010	PF00202	Aminotransferase class-III
CLI98_RS14015	PF00578	AhpC/TSA family
CLI98_RS14020	PF01475	Ferric uptake regulator family
CLI98_RS14025	PF11023	CLI98_RS14025
CLI98_RS14030	PF14540	Nucleotidyltransferase-like
CLI98_RS14135	PF03575	Peptidase family S51
CLI98_RS14140	PF01964	ThiC family
CLI98_RS14140	PF13667	ThiC-associated domain
CLI98_RS14145	PF01565	FAD binding domain
CLI98_RS14145	PF08031	Berberine and berberine like
CLI98_RS14150	PF13040	CLI98_RS14150
CLI98_RS14155	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CLI98_RS14160	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS14165	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS14165	PF12911	CLI98_RS14165
CLI98_RS14170	PF00005	ABC transporter
CLI98_RS14170	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CLI98_RS14175	PF00005	ABC transporter
CLI98_RS14175	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CLI98_RS14180	PF00199	Catalase
CLI98_RS14180	PF06628	Catalase-related immune-responsive
CLI98_RS14190	PF00005	ABC transporter
CLI98_RS14195	PF09084	NMT1/THI5 like
CLI98_RS14200	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS14205	PF00296	Luciferase-like monooxygenase
CLI98_RS14210	PF00253	Ribosomal protein S14p/S29e
CLI98_RS14220	PF01381	Helix-turn-helix
CLI98_RS14235	PF08331	CLI98_RS14235
CLI98_RS14235	PF13484	CLI98_RS14235
CLI98_RS14235	PF13646	HEAT repeats
CLI98_RS14240	PF12671	CLI98_RS14240
CLI98_RS14245	PF00588	SpoU rRNA Methylase family
CLI98_RS14250	PF13171	CLI98_RS14250
CLI98_RS14255	PF04519	CLI98_RS14255
CLI98_RS14270	PF06798	CLI98_RS14270
CLI98_RS14270	PF08298	PrkA AAA domain
CLI98_RS14280	PF04285	CLI98_RS14280
CLI98_RS14285	PF01047	MarR family
CLI98_RS14290	PF13437	HlyD family secretion protein
CLI98_RS14295	PF07690	Major Facilitator Superfamily
CLI98_RS14300	PF03358	NADPH-dependent FMN reductase
CLI98_RS14315	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS14320	PF00005	ABC transporter
CLI98_RS14325	PF00005	ABC transporter
CLI98_RS14330	PF12679	CLI98_RS14330
CLI98_RS14335	PF00313	'Cold-shock' DNA-binding domain
CLI98_RS14345	PF03180	NLPA lipoprotein
CLI98_RS14350	PF00990	GGDEF domain
CLI98_RS14350	PF07694	5TMR of 5TMR-LYT
CLI98_RS14355	PF00375	Sodium:dicarboxylate symporter family
CLI98_RS14365	PF09580	CLI98_RS14365
CLI98_RS14375	PF07875	CLI98_RS14375
CLI98_RS14380	PF00149	Calcineurin-like phosphoesterase
CLI98_RS14380	PF02872	5'-nucleotidase, C-terminal domain
CLI98_RS14385	PF04203	Sortase family
CLI98_RS14390	PF00849	RNA pseudouridylate synthase
CLI98_RS14395	PF17326	CLI98_RS14395
CLI98_RS14400	PF00571	CBS domain
CLI98_RS14405	PF13419	Haloacid dehalogenase-like hydrolase
CLI98_RS14410	PF00583	Acetyltransferase (GNAT) family
CLI98_RS14410	PF00795	Carbon-nitrogen hydrolase
CLI98_RS14415	PF00202	Aminotransferase class-III
CLI98_RS14420	PF04309	Glycerol-3-phosphate responsive antiterminator
CLI98_RS14425	PF00230	Major intrinsic protein
CLI98_RS14430	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CLI98_RS14430	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CLI98_RS14435	PF01266	FAD dependent oxidoreductase
CLI98_RS14435	PF16901	CLI98_RS14435
CLI98_RS14440	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CLI98_RS14440	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CLI98_RS14440	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CLI98_RS14440	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CLI98_RS14445	PF07730	Histidine kinase
CLI98_RS14445	PF13185	GAF domain
CLI98_RS14450	PF00072	Response regulator receiver domain
CLI98_RS14450	PF00196	Bacterial regulatory proteins, luxR family
CLI98_RS14455	PF03358	NADPH-dependent FMN reductase
CLI98_RS14460	PF14148	CLI98_RS14460
CLI98_RS14465	PF13028	Protein of unknown function (DUF3889)
CLI98_RS14470	PF00877	NlpC/P60 family
CLI98_RS14470	PF01476	LysM domain
CLI98_RS14475	PF02082	Transcriptional regulator
CLI98_RS14485	PF05552	Conserved TM helix
CLI98_RS14490	PF04293	CLI98_RS14490
CLI98_RS14495	PF00245	Alkaline phosphatase
CLI98_RS14500	PF00877	NlpC/P60 family
CLI98_RS14500	PF01476	LysM domain
CLI98_RS14505	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CLI98_RS14505	PF03466	LysR substrate binding domain
CLI98_RS14510	PF00285	Citrate synthase
CLI98_RS14515	PF13561	Enoyl-(Acyl carrier protein) reductase
CLI98_RS14520	PF13520	Amino acid permease
CLI98_RS14525	PF00209	Sodium:neurotransmitter symporter family
CLI98_RS14530	PF17453	CLI98_RS14530
CLI98_RS14535	PF13791	CLI98_RS14535
CLI98_RS14535	PF13800	CLI98_RS14535
CLI98_RS14540	PF04542	Sigma-70 region 2
CLI98_RS14540	PF08281	Sigma-70, region 4
CLI98_RS14545	PF01553	Acyltransferase
CLI98_RS14550	PF00571	CBS domain
CLI98_RS14550	PF01595	CLI98_RS14550
CLI98_RS14550	PF03471	Transporter associated domain
CLI98_RS14555	PF13411	MerR HTH family regulatory protein
CLI98_RS14560	PF00155	Aminotransferase class I and II
CLI98_RS14565	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS14565	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS14570	PF00571	CBS domain
CLI98_RS14570	PF01595	CLI98_RS14570
CLI98_RS14570	PF03471	Transporter associated domain
CLI98_RS14575	PF02537	CLI98_RS14575
CLI98_RS14580	PF02537	CLI98_RS14580
CLI98_RS14585	PF03009	Glycerophosphoryl diester phosphodiesterase family
CLI98_RS14590	PF17444	CLI98_RS14590
CLI98_RS14595	PF00924	Mechanosensitive ion channel
CLI98_RS14600	PF02146	Sir2 family
CLI98_RS14605	PF01522	Polysaccharide deacetylase
CLI98_RS14610	PF01063	Aminotransferase class IV
CLI98_RS14615	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS14615	PF13977	Bacterial transcriptional repressor
CLI98_RS14625	PF00582	Universal stress protein family
CLI98_RS14630	PF00005	ABC transporter
CLI98_RS14630	PF00664	ABC transporter transmembrane region
CLI98_RS14635	PF00005	ABC transporter
CLI98_RS14635	PF00664	ABC transporter transmembrane region
CLI98_RS14640	PF13460	NADH(P)-binding
CLI98_RS14650	PF00269	Small, acid-soluble spore proteins, alpha/beta type
CLI98_RS14660	PF17277	CLI98_RS14660
CLI98_RS14665	PF14398	CLI98_RS14665
CLI98_RS14670	PF14398	CLI98_RS14670
CLI98_RS14675	PF04286	CLI98_RS14675
CLI98_RS14680	PF06133	Protein of unknown function (DUF964)
CLI98_RS14685	PF08713	DNA alkylation repair enzyme
CLI98_RS14690	PF08282	haloacid dehalogenase-like hydrolase
CLI98_RS14695	PF04055	Radical SAM superfamily
CLI98_RS14700	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
CLI98_RS14705	PF00999	Sodium/hydrogen exchanger family
CLI98_RS14710	PF02080	TrkA-C domain
CLI98_RS14720	PF00378	Enoyl-CoA hydratase/isomerase family
CLI98_RS14725	PF14120	CLI98_RS14725
CLI98_RS14730	PF00005	ABC transporter
CLI98_RS14730	PF13732	CLI98_RS14730
CLI98_RS14735	PF12698	ABC-2 family transporter protein
CLI98_RS14740	PF00149	Calcineurin-like phosphoesterase
CLI98_RS14745	PF13514	AAA domain
CLI98_RS14750	PF01966	HD domain
CLI98_RS14755	PF14147	CLI98_RS14755
CLI98_RS14760	PF05698	Bacterial trigger factor protein (TF) C-terminus
CLI98_RS14760	PF13616	PPIC-type PPIASE domain
CLI98_RS14765	PF09680	CLI98_RS14765
CLI98_RS14770	PF09680	CLI98_RS14770
CLI98_RS14780	PF11667	CLI98_RS14780
CLI98_RS14790	PF08963	Protein of unknown function (DUF1878)
CLI98_RS14795	PF01047	MarR family
CLI98_RS14800	PF12732	CLI98_RS14800
CLI98_RS14810	PF17099	CLI98_RS14810
CLI98_RS14815	PF00266	Aminotransferase class-V
CLI98_RS14820	PF01230	HIT domain
CLI98_RS14825	PF00005	ABC transporter
CLI98_RS14830	PF05975	CLI98_RS14830
CLI98_RS14835	PF12787	CLI98_RS14835
CLI98_RS14840	PF01546	Peptidase family M20/M25/M40
CLI98_RS14840	PF07687	Peptidase dimerisation domain
CLI98_RS14850	PF03992	Antibiotic biosynthesis monooxygenase
CLI98_RS14855	PF00905	Penicillin binding protein transpeptidase domain
CLI98_RS14855	PF00912	Transglycosylase
CLI98_RS14860	PF01208	Uroporphyrinogen decarboxylase (URO-D)
CLI98_RS14865	PF00762	Ferrochelatase
CLI98_RS14870	PF01593	Flavin containing amine oxidoreductase
CLI98_RS14875	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS14880	PF12698	ABC-2 family transporter protein
CLI98_RS14885	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
CLI98_RS14885	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
CLI98_RS14895	PF05343	M42 glutamyl aminopeptidase
CLI98_RS14900	PF00375	Sodium:dicarboxylate symporter family
CLI98_RS14905	PF14149	CLI98_RS14905
CLI98_RS14910	PF12706	Beta-lactamase superfamily domain
CLI98_RS14915	PF03099	Biotin/lipoate A/B protein ligase family
CLI98_RS14915	PF10437	Bacterial lipoate protein ligase C-terminus
CLI98_RS14920	PF13460	NADH(P)-binding
CLI98_RS14925	PF00501	AMP-binding enzyme
CLI98_RS14925	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS14935	PF01435	Peptidase family M48
CLI98_RS14935	PF16491	CLI98_RS14935
CLI98_RS14940	PF00082	Subtilase family
CLI98_RS14940	PF05922	Peptidase inhibitor I9
CLI98_RS14950	PF01497	Periplasmic binding protein
CLI98_RS14955	PF00300	Histidine phosphatase superfamily (branch 1)
CLI98_RS14960	PF00108	Thiolase, N-terminal domain
CLI98_RS14960	PF02803	Thiolase, C-terminal domain
CLI98_RS14965	PF00501	AMP-binding enzyme
CLI98_RS14965	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS14970	PF02632	BioY family
CLI98_RS14975	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CLI98_RS14975	PF11563	Protoglobin
CLI98_RS14980	PF00355	Rieske [2Fe-2S] domain
CLI98_RS14980	PF01266	FAD dependent oxidoreductase
CLI98_RS14985	PF13561	Enoyl-(Acyl carrier protein) reductase
CLI98_RS14990	PF08858	IDEAL domain
CLI98_RS14995	PF06338	CLI98_RS14995
CLI98_RS15000	PF08818	Domain of unknown function (DU1801)
CLI98_RS15005	PF08818	Domain of unknown function (DU1801)
CLI98_RS15010	PF08877	MepB protein
CLI98_RS15015	PF15493	Domain of unknown function, YrpD
CLI98_RS15020	PF05901	CLI98_RS15020
CLI98_RS15025	PF01906	Putative heavy-metal-binding
CLI98_RS15030	PF00474	Sodium:solute symporter family
CLI98_RS15035	PF11755	CLI98_RS15035
CLI98_RS15045	PF09335	CLI98_RS15045
CLI98_RS15050	PF00717	Peptidase S24-like
CLI98_RS15055	PF01494	FAD binding domain
CLI98_RS15060	PF01047	MarR family
CLI98_RS15065	PF05145	CLI98_RS15065
CLI98_RS15070	PF07690	Major Facilitator Superfamily
CLI98_RS15075	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS15075	PF08360	QacR-like protein, C-terminal region
CLI98_RS15080	PF02915	Rubrerythrin
CLI98_RS15085	PF04239	Protein of unknown function (DUF421)
CLI98_RS15090	PF12705	PD-(D/E)XK nuclease superfamily
CLI98_RS15095	PF00580	UvrD/REP helicase N-terminal domain
CLI98_RS15095	PF12705	PD-(D/E)XK nuclease superfamily
CLI98_RS15095	PF13361	UvrD-like helicase C-terminal domain
CLI98_RS15100	PF00149	Calcineurin-like phosphoesterase
CLI98_RS15105	PF13476	AAA domain
CLI98_RS15105	PF13558	Putative exonuclease SbcCD, C subunit
CLI98_RS15115	PF10676	CLI98_RS15115
CLI98_RS15120	PF10970	CLI98_RS15120
CLI98_RS15130	PF10737	CLI98_RS15130
CLI98_RS15135	PF10803	CLI98_RS15135
CLI98_RS15140	PF10676	CLI98_RS15140
CLI98_RS15145	PF09388	Spo0E like sporulation regulatory protein
CLI98_RS15150	PF01557	Fumarylacetoacetate (FAA) hydrolase family
CLI98_RS15155	PF07457	CLI98_RS15155
CLI98_RS15160	PF10949	CLI98_RS15160
CLI98_RS15165	PF00733	Asparagine synthase
CLI98_RS15165	PF13537	Glutamine amidotransferase domain
CLI98_RS15170	PF00494	Squalene/phytoene synthase
CLI98_RS15175	PF01554	MatE
CLI98_RS15180	PF02311	AraC-like ligand binding domain
CLI98_RS15180	PF12833	Helix-turn-helix domain
CLI98_RS15185	PF00356	Bacterial regulatory proteins, lacI family
CLI98_RS15185	PF13377	Periplasmic binding protein-like domain
CLI98_RS15190	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CLI98_RS15190	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CLI98_RS15195	PF05163	DinB family
CLI98_RS15200	PF13599	Pentapeptide repeats (9 copies)
CLI98_RS15205	PF13673	Acetyltransferase (GNAT) domain
CLI98_RS15210	PF02219	Methylenetetrahydrofolate reductase
CLI98_RS15210	PF02574	Homocysteine S-methyltransferase
CLI98_RS15215	PF04461	Protein of unknown function (DUF520)
CLI98_RS15220	PF13509	S1 domain
CLI98_RS15225	PF02608	Basic membrane protein
CLI98_RS15230	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CLI98_RS15230	PF00672	HAMP domain
CLI98_RS15235	PF00067	Cytochrome P450
CLI98_RS15245	PF02645	Uncharacterised protein, DegV family COG1307
CLI98_RS15250	PF02588	CLI98_RS15250
CLI98_RS15250	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CLI98_RS15255	PF12690	Intracellular proteinase inhibitor
CLI98_RS15260	PF12758	CLI98_RS15260
CLI98_RS15265	PF08282	haloacid dehalogenase-like hydrolase
CLI98_RS15270	PF00326	Prolyl oligopeptidase family
CLI98_RS15275	PF01883	Domain of unknown function DUF59
CLI98_RS15280	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CLI98_RS15285	PF01565	FAD binding domain
CLI98_RS15290	PF07690	Major Facilitator Superfamily
CLI98_RS15295	PF01118	Semialdehyde dehydrogenase, NAD binding domain
CLI98_RS15295	PF02774	Semialdehyde dehydrogenase, dimerisation domain
CLI98_RS15300	PF01960	ArgJ family
CLI98_RS15305	PF00696	Amino acid kinase family
CLI98_RS15310	PF00202	Aminotransferase class-III
CLI98_RS15315	PF00117	Glutamine amidotransferase class-I
CLI98_RS15315	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
CLI98_RS15320	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CLI98_RS15320	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CLI98_RS15325	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
CLI98_RS15325	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CLI98_RS15330	PF14168	CLI98_RS15330
CLI98_RS15335	PF11151	CLI98_RS15335
CLI98_RS15355	PF02608	Basic membrane protein
CLI98_RS15360	PF10815	CLI98_RS15360
CLI98_RS15370	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
CLI98_RS15370	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
CLI98_RS15375	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS15375	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS15380	PF10026	CLI98_RS15380
CLI98_RS15385	PF00005	ABC transporter
CLI98_RS15385	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CLI98_RS15390	PF00005	ABC transporter
CLI98_RS15390	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CLI98_RS15395	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CLI98_RS15400	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS15405	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS15405	PF12911	CLI98_RS15405
CLI98_RS15410	PF12227	CLI98_RS15410
CLI98_RS15415	PF00579	tRNA synthetases class I (W and Y)
CLI98_RS15420	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CLI98_RS15425	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS15430	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS15430	PF12911	CLI98_RS15430
CLI98_RS15435	PF00005	ABC transporter
CLI98_RS15435	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CLI98_RS15440	PF00005	ABC transporter
CLI98_RS15440	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CLI98_RS15445	PF13200	CLI98_RS15445
CLI98_RS15450	PF13508	Acetyltransferase (GNAT) domain
CLI98_RS15455	PF03960	ArsC family
CLI98_RS15460	PF03741	CLI98_RS15460
CLI98_RS15465	PF05389	Negative regulator of genetic competence (MecA)
CLI98_RS15470	PF06054	CLI98_RS15470
CLI98_RS15475	PF01432	Peptidase family M3
CLI98_RS15475	PF08439	Oligopeptidase F
CLI98_RS15485	PF13743	Thioredoxin
CLI98_RS15490	PF01152	Bacterial-like globin
CLI98_RS15495	PF01464	Transglycosylase SLT domain
CLI98_RS15500	PF01928	CYTH domain
CLI98_RS15510	PF04607	Region found in RelA / SpoT proteins
CLI98_RS15515	PF01513	ATP-NAD kinase
CLI98_RS15520	PF00849	RNA pseudouridylate synthase
CLI98_RS15525	PF00149	Calcineurin-like phosphoesterase
CLI98_RS15535	PF00999	Sodium/hydrogen exchanger family
CLI98_RS15535	PF02080	TrkA-C domain
CLI98_RS15535	PF02254	TrkA-N domain
CLI98_RS15540	PF03070	TENA/THI-4/PQQC family
CLI98_RS15545	PF02581	Thiamine monophosphate synthase/TENI
CLI98_RS15550	PF01266	FAD dependent oxidoreductase
CLI98_RS15555	PF02597	ThiS family
CLI98_RS15560	PF05690	Thiazole biosynthesis protein ThiG
CLI98_RS15565	PF00899	ThiF family
CLI98_RS15570	PF08543	Phosphomethylpyrimidine kinase
CLI98_RS15575	PF13561	Enoyl-(Acyl carrier protein) reductase
CLI98_RS15580	PF14153	CLI98_RS15580
CLI98_RS15585	PF10612	CLI98_RS15585
CLI98_RS15590	PF10612	CLI98_RS15590
CLI98_RS15595	PF07552	CLI98_RS15595
CLI98_RS15605	PF07552	CLI98_RS15605
CLI98_RS15610	PF07098	CLI98_RS15610
CLI98_RS15620	PF09680	CLI98_RS15620
CLI98_RS15625	PF14069	CLI98_RS15625
CLI98_RS15630	PF00580	UvrD/REP helicase N-terminal domain
CLI98_RS15630	PF13361	UvrD-like helicase C-terminal domain
CLI98_RS15640	PF00753	Metallo-beta-lactamase superfamily
CLI98_RS15645	PF01061	CLI98_RS15645
CLI98_RS15650	PF00005	ABC transporter
CLI98_RS15655	PF04014	Antidote-toxin recognition MazE
CLI98_RS15660	PF13673	Acetyltransferase (GNAT) domain
CLI98_RS15665	PF13563	2'-5' RNA ligase superfamily
CLI98_RS15670	PF00756	Putative esterase
CLI98_RS15675	PF01053	Cys/Met metabolism PLP-dependent enzyme
CLI98_RS15680	PF01053	Cys/Met metabolism PLP-dependent enzyme
CLI98_RS15705	PF00561	alpha/beta hydrolase fold
CLI98_RS15745	PF08281	Sigma-70, region 4
CLI98_RS15760	PF02810	SEC-C motif
CLI98_RS15770	PF13354	Beta-lactamase enzyme family
CLI98_RS15775	PF03992	Antibiotic biosynthesis monooxygenase
CLI98_RS15780	PF07690	Major Facilitator Superfamily
CLI98_RS15785	PF01047	MarR family
CLI98_RS15790	PF07745	Glycosyl hydrolase family 53
CLI98_RS15795	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
CLI98_RS15795	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
CLI98_RS15800	PF01370	NAD dependent epimerase/dehydratase family
CLI98_RS15805	PF00288	GHMP kinases N terminal domain
CLI98_RS15805	PF08544	GHMP kinases C terminal
CLI98_RS15805	PF10509	Galactokinase galactose-binding signature
CLI98_RS15810	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CLI98_RS15810	PF02378	Phosphotransferase system, EIIC
CLI98_RS15815	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
CLI98_RS15820	PF00232	Glycosyl hydrolase family 1
CLI98_RS15825	PF00455	CLI98_RS15825
CLI98_RS15825	PF08220	DeoR-like helix-turn-helix domain
CLI98_RS15830	PF13419	Haloacid dehalogenase-like hydrolase
CLI98_RS15840	PF01047	MarR family
CLI98_RS15850	PF02308	CLI98_RS15850
CLI98_RS15860	PF14070	CLI98_RS15860
CLI98_RS15865	PF10990	CLI98_RS15865
CLI98_RS15870	PF14172	CLI98_RS15870
CLI98_RS15875	PF00384	Molybdopterin oxidoreductase
CLI98_RS15875	PF01568	Molydopterin dinucleotide binding domain
CLI98_RS15875	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CLI98_RS15875	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CLI98_RS15875	PF12838	4Fe-4S dicluster domain
CLI98_RS15875	PF13510	2Fe-2S iron-sulfur cluster binding domain
CLI98_RS15880	PF07849	CLI98_RS15880
CLI98_RS15885	PF00067	Cytochrome P450
CLI98_RS15890	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
CLI98_RS15900	PF02602	Uroporphyrinogen-III synthase HemD
CLI98_RS15905	PF03649	CLI98_RS15905
CLI98_RS15910	PF00005	ABC transporter
CLI98_RS15915	PF13536	Multidrug resistance efflux transporter
CLI98_RS15920	PF07883	Cupin domain
CLI98_RS15925	PF07849	CLI98_RS15925
CLI98_RS15930	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CLI98_RS15935	PF02614	Glucuronate isomerase
CLI98_RS15940	PF13347	MFS/sugar transport protein
CLI98_RS15945	PF00356	Bacterial regulatory proteins, lacI family
CLI98_RS15945	PF13377	Periplasmic binding protein-like domain
CLI98_RS15950	PF01232	Mannitol dehydrogenase Rossmann domain
CLI98_RS15950	PF08125	Mannitol dehydrogenase C-terminal domain
CLI98_RS15955	PF04295	CLI98_RS15955
CLI98_RS15955	PF08666	SAF domain
CLI98_RS15960	PF01925	CLI98_RS15960
CLI98_RS15965	PF05163	DinB family
CLI98_RS15970	PF13424	Tetratricopeptide repeat
CLI98_RS15980	PF01471	Putative peptidoglycan binding domain
CLI98_RS15980	PF01476	LysM domain
CLI98_RS15980	PF01510	N-acetylmuramoyl-L-alanine amidase
CLI98_RS15985	PF08000	Bacterial PH domain
CLI98_RS15990	PF05908	Protein of unknown function (DUF867)
CLI98_RS15995	PF06114	Domain of unknown function (DUF955)
CLI98_RS16000	PF12844	Helix-turn-helix domain
CLI98_RS16015	PF01695	IstB-like ATP binding protein
CLI98_RS16030	PF17356	CLI98_RS16030
CLI98_RS16035	PF08281	Sigma-70, region 4
CLI98_RS16040	PF03592	Terminase small subunit
CLI98_RS16040	PF10668	CLI98_RS16040
CLI98_RS16045	PF04466	Phage terminase large subunit
CLI98_RS16045	PF17288	CLI98_RS16045
CLI98_RS16050	PF04860	Phage portal protein
CLI98_RS16055	PF14550	CLI98_RS16055
CLI98_RS16060	PF05065	Phage capsid family
CLI98_RS16065	PF11436	Protein of unknown function (DUF3199)
CLI98_RS16070	PF12206	Domain of unknown function (DUF3599)
CLI98_RS16075	PF04883	CLI98_RS16075
CLI98_RS16090	PF04984	Phage tail sheath protein
CLI98_RS16090	PF17481	CLI98_RS16090
CLI98_RS16090	PF17482	CLI98_RS16090
CLI98_RS16095	PF09393	Protein of unknown function (DUF2001)
CLI98_RS16100	PF08890	Phage XkdN-like protein
CLI98_RS16110	PF01464	Transglycosylase SLT domain
CLI98_RS16115	PF01476	LysM domain
CLI98_RS16125	PF10844	CLI98_RS16125
CLI98_RS16130	PF10934	CLI98_RS16130
CLI98_RS16135	PF04865	CLI98_RS16135
CLI98_RS16140	PF10076	CLI98_RS16140
CLI98_RS16155	PF09636	XkdW protein
CLI98_RS16160	PF09693	CLI98_RS16160
CLI98_RS16170	PF10779	CLI98_RS16170
CLI98_RS16175	PF04688	CLI98_RS16175
CLI98_RS16180	PF01471	Putative peptidoglycan binding domain
CLI98_RS16180	PF01476	LysM domain
CLI98_RS16180	PF01510	N-acetylmuramoyl-L-alanine amidase
CLI98_RS16185	PF14185	Antitoxin SpoIISB, type II toxin-antitoxin system
CLI98_RS16190	PF14171	Toxin SpoIISA, type II toxin-antitoxin system
CLI98_RS16195	PF01384	CLI98_RS16195
CLI98_RS16200	PF01865	Protein of unknown function DUF47
CLI98_RS16205	PF13520	Amino acid permease
CLI98_RS16210	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CLI98_RS16215	PF13231	CLI98_RS16215
CLI98_RS16220	PF00535	Glycosyl transferase family 2
CLI98_RS16230	PF13180	PDZ domain
CLI98_RS16230	PF13365	Trypsin-like peptidase domain
CLI98_RS16235	PF07690	Major Facilitator Superfamily
CLI98_RS16240	PF04951	D-aminopeptidase
CLI98_RS16245	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS16250	PF00528	Binding-protein-dependent transport system inner membrane component
CLI98_RS16250	PF12911	CLI98_RS16250
CLI98_RS16255	PF00005	ABC transporter
CLI98_RS16255	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CLI98_RS16260	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CLI98_RS16265	PF02016	LD-carboxypeptidase
CLI98_RS16270	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
CLI98_RS16270	PF13378	Enolase C-terminal domain-like
CLI98_RS16275	PF00877	NlpC/P60 family
CLI98_RS16280	PF00005	ABC transporter
CLI98_RS16280	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CLI98_RS16285	PF10282	Lactonase, 7-bladed beta-propeller
CLI98_RS16290	PF02274	Amidinotransferase
CLI98_RS16295	PF03061	Thioesterase superfamily
CLI98_RS16300	PF13302	Acetyltransferase (GNAT) domain
CLI98_RS16305	PF00893	Small Multidrug Resistance protein
CLI98_RS16310	PF00893	Small Multidrug Resistance protein
CLI98_RS16315	PF00551	Formyl transferase
CLI98_RS16315	PF01842	ACT domain
CLI98_RS16320	PF00696	Amino acid kinase family
CLI98_RS16320	PF01472	PUA domain
CLI98_RS16325	PF00171	Aldehyde dehydrogenase family
CLI98_RS16330	PF02566	OsmC-like protein
CLI98_RS16335	PF01047	MarR family
CLI98_RS16340	PF02566	OsmC-like protein
CLI98_RS16345	PF01391	Collagen triple helix repeat (20 copies)
CLI98_RS16355	PF00535	Glycosyl transferase family 2
CLI98_RS16365	PF12832	MFS_1 like family
CLI98_RS16375	PF01717	Cobalamin-independent synthase, Catalytic domain
CLI98_RS16375	PF08267	Cobalamin-independent synthase, N-terminal domain
CLI98_RS16380	PF00082	Subtilase family
CLI98_RS16385	PF01740	STAS domain
CLI98_RS16390	PF02361	Cobalt transport protein
CLI98_RS16395	PF00005	ABC transporter
CLI98_RS16400	PF09819	CLI98_RS16400
CLI98_RS16405	PF00704	Glycosyl hydrolases family 18
CLI98_RS16405	PF01476	LysM domain
CLI98_RS16420	PF00571	CBS domain
CLI98_RS16420	PF01769	Divalent cation transporter
CLI98_RS16420	PF03448	MgtE intracellular N domain
CLI98_RS16425	PF13411	MerR HTH family regulatory protein
CLI98_RS16435	PF13076	CLI98_RS16435
CLI98_RS16440	PF01047	MarR family
CLI98_RS16450	PF01068	ATP dependent DNA ligase domain
CLI98_RS16455	PF02735	Ku70/Ku80 beta-barrel domain
CLI98_RS16460	PF09335	CLI98_RS16460
CLI98_RS16465	PF03741	CLI98_RS16465
CLI98_RS16470	PF04542	Sigma-70 region 2
CLI98_RS16475	PF12791	CLI98_RS16475
CLI98_RS16480	PF00269	Small, acid-soluble spore proteins, alpha/beta type
CLI98_RS16485	PF08876	CLI98_RS16485
CLI98_RS16490	PF01435	Peptidase family M48
CLI98_RS16495	PF02386	Cation transport protein
CLI98_RS16500	PF04239	Protein of unknown function (DUF421)
CLI98_RS16510	PF01757	CLI98_RS16510
CLI98_RS16515	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS16515	PF00989	PAS fold
CLI98_RS16515	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS16515	PF13188	PAS domain
CLI98_RS16515	PF13426	PAS domain
CLI98_RS16520	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
CLI98_RS16520	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
CLI98_RS16525	PF01008	Initiation factor 2 subunit family
CLI98_RS16530	PF01636	Phosphotransferase enzyme family
CLI98_RS16535	PF00795	Carbon-nitrogen hydrolase
CLI98_RS16540	PF00155	Aminotransferase class I and II
CLI98_RS16545	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
CLI98_RS16545	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
CLI98_RS16550	PF12710	haloacid dehalogenase-like hydrolase
CLI98_RS16555	PF00596	Class II Aldolase and Adducin N-terminal domain
CLI98_RS16560	PF03079	ARD/ARD' family
CLI98_RS16565	PF09388	Spo0E like sporulation regulatory protein
CLI98_RS16570	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS16570	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS16570	PF02743	Cache domain
CLI98_RS16575	PF01047	MarR family
CLI98_RS16580	PF00691	OmpA family
CLI98_RS16580	PF13677	CLI98_RS16580
CLI98_RS16585	PF01618	CLI98_RS16585
CLI98_RS16590	PF00004	ATPase family associated with various cellular activities (AAA)
CLI98_RS16590	PF02151	UvrB/uvrC motif
CLI98_RS16590	PF07724	AAA domain (Cdc48 subfamily)
CLI98_RS16590	PF10431	C-terminal, D2-small domain, of ClpB protein
CLI98_RS16610	PF06508	Queuosine biosynthesis protein QueC
CLI98_RS16615	PF01242	6-pyruvoyl tetrahydropterin synthase
CLI98_RS16620	PF04055	Radical SAM superfamily
CLI98_RS16620	PF13394	4Fe-4S single cluster domain
CLI98_RS16625	PF14489	QueF-like protein
CLI98_RS16630	PF01638	HxlR-like helix-turn-helix
CLI98_RS16635	PF13561	Enoyl-(Acyl carrier protein) reductase
CLI98_RS16645	PF11514	Protein of unknown function (DUF3219)
CLI98_RS16650	PF09953	CLI98_RS16650
CLI98_RS16660	PF07486	Cell Wall Hydrolase
CLI98_RS16665	PF01943	CLI98_RS16665
CLI98_RS16665	PF14667	Polysaccharide biosynthesis C-terminal domain
CLI98_RS16670	PF00578	AhpC/TSA family
CLI98_RS16675	PF00122	E1-E2 ATPase
CLI98_RS16675	PF00702	haloacid dehalogenase-like hydrolase
CLI98_RS16680	PF00557	Metallopeptidase family M24
CLI98_RS16680	PF01321	Creatinase/Prolidase N-terminal domain
CLI98_RS16685	PF00356	Bacterial regulatory proteins, lacI family
CLI98_RS16685	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
CLI98_RS16690	PF00874	PRD domain
CLI98_RS16690	PF03123	CAT RNA binding domain
CLI98_RS16695	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CLI98_RS16695	PF00367	phosphotransferase system, EIIB
CLI98_RS16695	PF02378	Phosphotransferase system, EIIC
CLI98_RS16700	PF00381	PTS HPr component phosphorylation site
CLI98_RS16705	PF00391	PEP-utilising enzyme, mobile domain
CLI98_RS16705	PF02896	PEP-utilising enzyme, TIM barrel domain
CLI98_RS16705	PF05524	PEP-utilising enzyme, N-terminal
CLI98_RS16710	PF11132	CLI98_RS16710
CLI98_RS16720	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CLI98_RS16720	PF00672	HAMP domain
CLI98_RS16720	PF02743	Cache domain
CLI98_RS16725	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
CLI98_RS16725	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
CLI98_RS16735	PF00543	Nitrogen regulatory protein P-II
CLI98_RS16740	PF00188	Cysteine-rich secretory protein family
CLI98_RS16745	PF00905	Penicillin binding protein transpeptidase domain
CLI98_RS16745	PF03717	Penicillin-binding Protein dimerisation domain
CLI98_RS16750	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS16750	PF00989	PAS fold
CLI98_RS16750	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS16750	PF08447	PAS fold
CLI98_RS16755	PF00155	Aminotransferase class I and II
CLI98_RS16770	PF00072	Response regulator receiver domain
CLI98_RS16770	PF01584	CheW-like domain
CLI98_RS16775	PF14177	CLI98_RS16775
CLI98_RS16780	PF07690	Major Facilitator Superfamily
CLI98_RS16785	PF01476	LysM domain
CLI98_RS16785	PF03734	L,D-transpeptidase catalytic domain
CLI98_RS16790	PF00149	Calcineurin-like phosphoesterase
CLI98_RS16795	PF13561	Enoyl-(Acyl carrier protein) reductase
CLI98_RS16805	PF00563	EAL domain
CLI98_RS16805	PF10388	EAL-domain associated signalling protein domain
CLI98_RS16810	PF08796	Protein of unknown function (DUF1797)
CLI98_RS16815	PF04308	CLI98_RS16815
CLI98_RS16820	PF14156	Antirepressor AbbA
CLI98_RS16830	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CLI98_RS16830	PF03466	LysR substrate binding domain
CLI98_RS16835	PF00258	Flavodoxin
CLI98_RS16845	PF00258	Flavodoxin
CLI98_RS16850	PF00132	Bacterial transferase hexapeptide (six repeats)
CLI98_RS16850	PF08503	Tetrahydrodipicolinate succinyltransferase N-terminal
CLI98_RS16850	PF14602	Hexapeptide repeat of succinyl-transferase
CLI98_RS16855	PF01546	Peptidase family M20/M25/M40
CLI98_RS16855	PF07687	Peptidase dimerisation domain
CLI98_RS16860	PF03698	CLI98_RS16860
CLI98_RS16865	PF00924	Mechanosensitive ion channel
CLI98_RS16870	PF00578	AhpC/TSA family
CLI98_RS16885	PF12804	MobA-like NTP transferase domain
CLI98_RS16890	PF00899	ThiF family
CLI98_RS16895	PF00994	Probable molybdopterin binding domain
CLI98_RS16895	PF03453	MoeA N-terminal region (domain I and II)
CLI98_RS16895	PF03454	MoeA C-terminal region (domain IV)
CLI98_RS16900	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
CLI98_RS16905	PF02391	MoaE protein
CLI98_RS16910	PF02597	ThiS family
CLI98_RS16915	PF04893	CLI98_RS16915
CLI98_RS16920	PF16576	CLI98_RS16920
CLI98_RS16925	PF00005	ABC transporter
CLI98_RS16930	PF02687	CLI98_RS16930
CLI98_RS16930	PF12704	MacB-like periplasmic core domain
CLI98_RS16935	PF00455	CLI98_RS16935
CLI98_RS16935	PF08220	DeoR-like helix-turn-helix domain
CLI98_RS16940	PF00294	pfkB family carbohydrate kinase
CLI98_RS16945	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CLI98_RS16945	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CLI98_RS16950	PF00717	Peptidase S24-like
CLI98_RS16960	PF00005	ABC transporter
CLI98_RS16960	PF12848	ABC transporter
CLI98_RS16965	PF02558	Ketopantoate reductase PanE/ApbA
CLI98_RS16965	PF08546	Ketopantoate reductase PanE/ApbA C terminal
CLI98_RS16970	PF02073	Thermophilic metalloprotease (M29)
CLI98_RS16975	PF17447	CLI98_RS16975
CLI98_RS16980	PF06723	MreB/Mbl protein
CLI98_RS16990	PF04014	Antidote-toxin recognition MazE
CLI98_RS16995	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS16995	PF00989	PAS fold
CLI98_RS16995	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS17000	PF06094	AIG2-like family
CLI98_RS17000	PF13772	AIG2-like family
CLI98_RS17005	PF02080	TrkA-C domain
CLI98_RS17005	PF02254	TrkA-N domain
CLI98_RS17010	PF01979	Amidohydrolase family
CLI98_RS17010	PF13382	Adenine deaminase C-terminal domain
CLI98_RS17015	PF00753	Metallo-beta-lactamase superfamily
CLI98_RS17015	PF07521	RNA-metabolising metallo-beta-lactamase
CLI98_RS17020	PF07288	Protein of unknown function (DUF1447)
CLI98_RS17030	PF08282	haloacid dehalogenase-like hydrolase
CLI98_RS17035	PF01327	Polypeptide deformylase
CLI98_RS17040	PF09680	CLI98_RS17040
CLI98_RS17045	PF10368	Putative cell-wall binding lipoprotein
CLI98_RS17055	PF00698	Acyl transferase domain
CLI98_RS17060	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS17060	PF00550	Phosphopantetheine attachment site
CLI98_RS17060	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS17060	PF08659	KR domain
CLI98_RS17060	PF14765	Polyketide synthase dehydratase
CLI98_RS17060	PF16197	CLI98_RS17060
CLI98_RS17065	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS17065	PF00550	Phosphopantetheine attachment site
CLI98_RS17065	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS17065	PF08659	KR domain
CLI98_RS17065	PF14765	Polyketide synthase dehydratase
CLI98_RS17065	PF16197	CLI98_RS17065
CLI98_RS17070	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS17070	PF00550	Phosphopantetheine attachment site
CLI98_RS17070	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS17070	PF08659	KR domain
CLI98_RS17070	PF14765	Polyketide synthase dehydratase
CLI98_RS17070	PF16197	CLI98_RS17070
CLI98_RS17075	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS17075	PF00550	Phosphopantetheine attachment site
CLI98_RS17075	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS17075	PF08659	KR domain
CLI98_RS17075	PF16197	CLI98_RS17075
CLI98_RS17080	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS17080	PF00550	Phosphopantetheine attachment site
CLI98_RS17080	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS17080	PF08659	KR domain
CLI98_RS17080	PF14765	Polyketide synthase dehydratase
CLI98_RS17080	PF16197	CLI98_RS17080
CLI98_RS17085	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS17085	PF00550	Phosphopantetheine attachment site
CLI98_RS17085	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS17085	PF08659	KR domain
CLI98_RS17085	PF16197	CLI98_RS17085
CLI98_RS17090	PF00550	Phosphopantetheine attachment site
CLI98_RS17090	PF00561	alpha/beta hydrolase fold
CLI98_RS17090	PF08659	KR domain
CLI98_RS17090	PF14765	Polyketide synthase dehydratase
CLI98_RS17095	PF00144	Beta-lactamase
CLI98_RS17100	PF00676	Dehydrogenase E1 component
CLI98_RS17105	PF02779	Transketolase, pyrimidine binding domain
CLI98_RS17105	PF02780	Transketolase, C-terminal domain
CLI98_RS17110	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CLI98_RS17110	PF00364	Biotin-requiring enzyme
CLI98_RS17110	PF02817	e3 binding domain
CLI98_RS17115	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CLI98_RS17115	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CLI98_RS17125	PF01522	Polysaccharide deacetylase
CLI98_RS17130	PF13790	CLI98_RS17130
CLI98_RS17135	PF01276	Orn/Lys/Arg decarboxylase, major domain
CLI98_RS17135	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
CLI98_RS17140	PF05256	Uncharacterised protein family (UPF0223)
CLI98_RS17145	PF06335	Protein of unknown function (DUF1054)
CLI98_RS17160	PF00459	Inositol monophosphatase family
CLI98_RS17165	PF00583	Acetyltransferase (GNAT) family
CLI98_RS17170	PF01447	Thermolysin metallopeptidase, catalytic domain
CLI98_RS17170	PF02868	Thermolysin metallopeptidase, alpha-helical domain
CLI98_RS17170	PF03413	Peptidase propeptide and YPEB domain
CLI98_RS17170	PF07504	Fungalysin/Thermolysin Propeptide Motif
CLI98_RS17185	PF04542	Sigma-70 region 2
CLI98_RS17185	PF08281	Sigma-70, region 4
CLI98_RS17190	PF13490	Putative zinc-finger
CLI98_RS17200	PF17259	CLI98_RS17200
CLI98_RS17205	PF00009	Elongation factor Tu GTP binding domain
CLI98_RS17205	PF00679	Elongation factor G C-terminus
CLI98_RS17205	PF03144	Elongation factor Tu domain 2
CLI98_RS17205	PF14492	Elongation Factor G, domain II
CLI98_RS17210	PF14036	CLI98_RS17210
CLI98_RS17215	PF09963	CLI98_RS17215
CLI98_RS17220	PF09580	CLI98_RS17220
CLI98_RS17225	PF02562	PhoH-like protein
CLI98_RS17225	PF13638	PIN domain
CLI98_RS17235	PF04960	Glutaminase
CLI98_RS17240	PF07408	Protein of unknown function (DUF1507)
CLI98_RS17245	PF01098	CLI98_RS17245
CLI98_RS17250	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
CLI98_RS17250	PF00364	Biotin-requiring enzyme
CLI98_RS17250	PF00682	HMGL-like
CLI98_RS17250	PF02436	Conserved carboxylase domain
CLI98_RS17250	PF02785	Biotin carboxylase C-terminal domain
CLI98_RS17250	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CLI98_RS17255	PF02628	CLI98_RS17255
CLI98_RS17260	PF01040	UbiA prenyltransferase family
CLI98_RS17265	PF00034	Cytochrome c
CLI98_RS17265	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
CLI98_RS17265	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
CLI98_RS17270	PF00115	Cytochrome C and Quinol oxidase polypeptide I
CLI98_RS17275	PF00510	Cytochrome c oxidase subunit III
CLI98_RS17280	PF03626	CLI98_RS17280
CLI98_RS17285	PF09678	CLI98_RS17285
CLI98_RS17290	PF08868	YugN-like family
CLI98_RS17295	PF00571	CBS domain
CLI98_RS17300	PF00188	Cysteine-rich secretory protein family
CLI98_RS17300	PF14504	CAP-associated N-terminal
CLI98_RS17305	PF14071	CLI98_RS17305
CLI98_RS17310	PF14003	CLI98_RS17310
CLI98_RS17315	PF06133	Protein of unknown function (DUF964)
CLI98_RS17320	PF09902	CLI98_RS17320
CLI98_RS17325	PF03602	Conserved hypothetical protein 95
CLI98_RS17330	PF01467	Cytidylyltransferase
CLI98_RS17335	PF07670	Nucleoside recognition
CLI98_RS17340	PF01734	Patatin-like phospholipase
CLI98_RS17345	PF05362	Lon protease (S16) C-terminal proteolytic domain
CLI98_RS17345	PF13180	PDZ domain
CLI98_RS17350	PF05636	HIGH Nucleotidyl Transferase
CLI98_RS17355	PF02620	CLI98_RS17355
CLI98_RS17360	PF01783	Ribosomal L32p protein family
CLI98_RS17365	PF13921	Myb-like DNA-binding domain
CLI98_RS17370	PF00583	Acetyltransferase (GNAT) family
CLI98_RS17375	PF02558	Ketopantoate reductase PanE/ApbA
CLI98_RS17375	PF08546	Ketopantoate reductase PanE/ApbA C terminal
CLI98_RS17380	PF10079	CLI98_RS17380
CLI98_RS17385	PF02381	MraZ protein
CLI98_RS17390	PF01795	MraW methylase family
CLI98_RS17400	PF00905	Penicillin binding protein transpeptidase domain
CLI98_RS17400	PF03717	Penicillin-binding Protein dimerisation domain
CLI98_RS17400	PF03793	PASTA domain
CLI98_RS17405	PF00905	Penicillin binding protein transpeptidase domain
CLI98_RS17405	PF03717	Penicillin-binding Protein dimerisation domain
CLI98_RS17405	PF03793	PASTA domain
CLI98_RS17410	PF01225	Mur ligase family, catalytic domain
CLI98_RS17410	PF02875	Mur ligase family, glutamate ligase domain
CLI98_RS17410	PF08245	Mur ligase middle domain
CLI98_RS17415	PF00953	Glycosyl transferase family 4
CLI98_RS17415	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
CLI98_RS17420	PF02875	Mur ligase family, glutamate ligase domain
CLI98_RS17420	PF08245	Mur ligase middle domain
CLI98_RS17425	PF01098	CLI98_RS17425
CLI98_RS17430	PF03033	Glycosyltransferase family 28 N-terminal domain
CLI98_RS17430	PF04101	Glycosyltransferase family 28 C-terminal domain
CLI98_RS17435	PF01565	FAD binding domain
CLI98_RS17435	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
CLI98_RS17440	PF03799	Cell division protein FtsQ
CLI98_RS17440	PF08478	POTRA domain, FtsQ-type
CLI98_RS17445	PF02491	SHS2 domain inserted in FTSA
CLI98_RS17445	PF14450	Cell division protein FtsA
CLI98_RS17450	PF00091	Tubulin/FtsZ family, GTPase domain
CLI98_RS17450	PF12327	FtsZ family, C-terminal domain
CLI98_RS17455	PF00082	Subtilase family
CLI98_RS17455	PF05547	CLI98_RS17455
CLI98_RS17455	PF05922	Peptidase inhibitor I9
CLI98_RS17455	PF13715	CLI98_RS17455
CLI98_RS17460	PF03419	CLI98_RS17460
CLI98_RS17465	PF04542	Sigma-70 region 2
CLI98_RS17465	PF04545	Sigma-70, region 4
CLI98_RS17470	PF04539	Sigma-70 region 3
CLI98_RS17470	PF04542	Sigma-70 region 2
CLI98_RS17470	PF04545	Sigma-70, region 4
CLI98_RS17475	PF00005	ABC transporter
CLI98_RS17480	PF01546	Peptidase family M20/M25/M40
CLI98_RS17480	PF07687	Peptidase dimerisation domain
CLI98_RS17485	PF05239	PRC-barrel domain
CLI98_RS17490	PF02578	Multi-copper polyphenol oxidoreductase laccase
CLI98_RS17495	PF01168	Alanine racemase, N-terminal domain
CLI98_RS17500	PF04472	Protein of unknown function (DUF552)
CLI98_RS17505	PF02325	CLI98_RS17505
CLI98_RS17510	PF01479	S4 domain
CLI98_RS17515	PF05103	DivIVA protein
CLI98_RS17525	PF00133	tRNA synthetases class I (I, L, M and V)
CLI98_RS17525	PF08264	Anticodon-binding domain of tRNA
CLI98_RS17535	PF01252	CLI98_RS17535
CLI98_RS17540	PF00849	RNA pseudouridylate synthase
CLI98_RS17540	PF01479	S4 domain
CLI98_RS17545	PF00156	Phosphoribosyl transferase domain
CLI98_RS17550	PF00860	Permease family
CLI98_RS17555	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
CLI98_RS17555	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CLI98_RS17560	PF01979	Amidohydrolase family
CLI98_RS17565	PF00117	Glutamine amidotransferase class-I
CLI98_RS17565	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
CLI98_RS17570	PF02142	MGS-like domain
CLI98_RS17570	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CLI98_RS17570	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CLI98_RS17575	PF00175	Oxidoreductase NAD-binding domain
CLI98_RS17575	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
CLI98_RS17580	PF01180	Dihydroorotate dehydrogenase
CLI98_RS17585	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
CLI98_RS17590	PF00156	Phosphoribosyl transferase domain
CLI98_RS17595	PF01507	Phosphoadenosine phosphosulfate reductase family
CLI98_RS17600	PF01384	CLI98_RS17600
CLI98_RS17605	PF01747	ATP-sulfurylase
CLI98_RS17605	PF14306	PUA-like domain
CLI98_RS17610	PF01583	Adenylylsulphate kinase
CLI98_RS17615	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CLI98_RS17620	PF01903	CbiX
CLI98_RS17625	PF13241	Putative NAD(P)-binding
CLI98_RS17635	PF05670	CLI98_RS17635
CLI98_RS17635	PF05833	Fibronectin-binding protein A N-terminus (FbpA)
CLI98_RS17640	PF00122	E1-E2 ATPase
CLI98_RS17640	PF00689	Cation transporting ATPase, C-terminus
CLI98_RS17640	PF00690	Cation transporter/ATPase, N-terminus
CLI98_RS17640	PF00702	haloacid dehalogenase-like hydrolase
CLI98_RS17645	PF03755	CLI98_RS17645
CLI98_RS17645	PF08340	CLI98_RS17645
CLI98_RS17650	PF04025	CLI98_RS17650
CLI98_RS17655	PF00625	Guanylate kinase
CLI98_RS17660	PF01192	RNA polymerase Rpb6
CLI98_RS17665	PF02441	Flavoprotein
CLI98_RS17665	PF04127	DNA / pantothenate metabolism flavoprotein
CLI98_RS17670	PF00271	Helicase conserved C-terminal domain
CLI98_RS17670	PF04851	Type III restriction enzyme, res subunit
CLI98_RS17675	PF01327	Polypeptide deformylase
CLI98_RS17680	PF00551	Formyl transferase
CLI98_RS17680	PF02911	Formyl transferase, C-terminal domain
CLI98_RS17685	PF01029	NusB family
CLI98_RS17685	PF01189	NOL1/NOP2/sun family
CLI98_RS17690	PF04055	Radical SAM superfamily
CLI98_RS17690	PF13394	4Fe-4S single cluster domain
CLI98_RS17695	PF13672	Protein phosphatase 2C
CLI98_RS17700	PF00069	Protein kinase domain
CLI98_RS17700	PF03793	PASTA domain
CLI98_RS17705	PF03193	Protein of unknown function, DUF258
CLI98_RS17705	PF16745	CLI98_RS17705
CLI98_RS17710	PF00834	Ribulose-phosphate 3 epimerase family
CLI98_RS17715	PF04263	Thiamin pyrophosphokinase, catalytic domain
CLI98_RS17715	PF04265	Thiamin pyrophosphokinase, vitamin B1 binding domain
CLI98_RS17720	PF08183	CLI98_RS17720
CLI98_RS17725	PF00830	Ribosomal L28 family
CLI98_RS17730	PF03780	CLI98_RS17730
CLI98_RS17735	PF02734	DAK2 domain
CLI98_RS17735	PF13684	Dihydroxyacetone kinase family
CLI98_RS17740	PF01842	ACT domain
CLI98_RS17740	PF03315	Serine dehydratase beta chain
CLI98_RS17745	PF03313	CLI98_RS17745
CLI98_RS17750	PF00270	DEAD/DEAH box helicase
CLI98_RS17750	PF00271	Helicase conserved C-terminal domain
CLI98_RS17750	PF17191	CLI98_RS17750
CLI98_RS17755	PF03061	Thioesterase superfamily
CLI98_RS17760	PF02504	Fatty acid synthesis protein
CLI98_RS17765	PF00698	Acyl transferase domain
CLI98_RS17770	PF13561	Enoyl-(Acyl carrier protein) reductase
CLI98_RS17775	PF00550	Phosphopantetheine attachment site
CLI98_RS17780	PF00035	Double-stranded RNA binding motif
CLI98_RS17780	PF14622	Ribonuclease-III-like
CLI98_RS17785	PF02463	RecF/RecN/SMC N terminal domain
CLI98_RS17785	PF06470	SMC proteins Flexible Hinge Domain
CLI98_RS17790	PF00448	SRP54-type protein, GTPase domain
CLI98_RS17790	PF02881	SRP54-type protein, helical bundle domain
CLI98_RS17795	PF01636	Phosphotransferase enzyme family
CLI98_RS17800	PF04297	Putative helix-turn-helix protein, YlxM / p13 like
CLI98_RS17805	PF00448	SRP54-type protein, GTPase domain
CLI98_RS17805	PF02881	SRP54-type protein, helical bundle domain
CLI98_RS17805	PF02978	Signal peptide binding domain
CLI98_RS17810	PF00886	Ribosomal protein S16
CLI98_RS17815	PF13083	KH domain
CLI98_RS17820	PF11068	YlqD protein
CLI98_RS17825	PF01782	RimM N-terminal domain
CLI98_RS17825	PF05239	PRC-barrel domain
CLI98_RS17830	PF01746	tRNA (Guanine-1)-methyltransferase
CLI98_RS17835	PF01245	Ribosomal protein L19
CLI98_RS17840	PF01926	50S ribosome-binding GTPase
CLI98_RS17845	PF01351	Ribonuclease HII
CLI98_RS17855	PF01312	FlhB HrpN YscU SpaS Family
CLI98_RS17860	PF00549	CoA-ligase
CLI98_RS17860	PF08442	ATP-grasp domain
CLI98_RS17865	PF00549	CoA-ligase
CLI98_RS17865	PF02629	CoA binding domain
CLI98_RS17870	PF02481	DNA recombination-mediator protein A
CLI98_RS17875	PF01131	DNA topoisomerase
CLI98_RS17875	PF01396	CLI98_RS17875
CLI98_RS17875	PF01751	Toprim domain
CLI98_RS17880	PF01134	Glucose inhibited division protein A
CLI98_RS17885	PF00589	Phage integrase family
CLI98_RS17885	PF02899	Phage integrase, N-terminal SAM-like domain
CLI98_RS17890	PF00227	Proteasome subunit
CLI98_RS17895	PF00004	ATPase family associated with various cellular activities (AAA)
CLI98_RS17895	PF07724	AAA domain (Cdc48 subfamily)
CLI98_RS17895	PF10431	C-terminal, D2-small domain, of ClpB protein
CLI98_RS17900	PF06018	CodY GAF-like domain
CLI98_RS17900	PF08222	CodY helix-turn-helix domain
CLI98_RS17905	PF00460	Flagella basal body rod protein
CLI98_RS17910	PF00460	Flagella basal body rod protein
CLI98_RS17910	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CLI98_RS17915	PF02049	CLI98_RS17915
CLI98_RS17920	PF01514	Secretory protein of YscJ/FliF family
CLI98_RS17920	PF08345	CLI98_RS17920
CLI98_RS17925	PF01706	FliG C-terminal domain
CLI98_RS17925	PF14841	FliG middle domain
CLI98_RS17925	PF14842	FliG N-terminal domain
CLI98_RS17930	PF02108	CLI98_RS17930
CLI98_RS17935	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CLI98_RS17935	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CLI98_RS17940	PF02050	Flagellar FliJ protein
CLI98_RS17945	PF03448	MgtE intracellular N domain
CLI98_RS17950	PF02120	Flagellar hook-length control protein FliK
CLI98_RS17955	PF03963	CLI98_RS17955
CLI98_RS17960	PF00460	Flagella basal body rod protein
CLI98_RS17960	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CLI98_RS17965	PF06289	CLI98_RS17965
CLI98_RS17970	PF03748	CLI98_RS17970
CLI98_RS17975	PF01052	Surface presentation of antigens (SPOA)
CLI98_RS17975	PF02154	Flagellar motor switch protein FliM
CLI98_RS17980	PF01052	Surface presentation of antigens (SPOA)
CLI98_RS17980	PF04509	CheC-like family
CLI98_RS17985	PF00072	Response regulator receiver domain
CLI98_RS17990	PF04347	CLI98_RS17990
CLI98_RS17995	PF00813	CLI98_RS17995
CLI98_RS18000	PF01313	CLI98_RS18000
CLI98_RS18005	PF01311	CLI98_RS18005
CLI98_RS18010	PF01312	FlhB HrpN YscU SpaS Family
CLI98_RS18015	PF00771	FHIPEP family
CLI98_RS18020	PF00448	SRP54-type protein, GTPase domain
CLI98_RS18025	PF10609	ParA/MinD ATPase like
CLI98_RS18030	PF00072	Response regulator receiver domain
CLI98_RS18030	PF01339	CheB methylesterase
CLI98_RS18035	PF01584	CheW-like domain
CLI98_RS18035	PF01627	Hpt domain
CLI98_RS18035	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS18035	PF02895	Signal transducing histidine kinase, homodimeric domain
CLI98_RS18035	PF07194	P2 response regulator binding domain
CLI98_RS18040	PF01584	CheW-like domain
CLI98_RS18045	PF04509	CheC-like family
CLI98_RS18050	PF03975	CheD chemotactic sensory transduction
CLI98_RS18055	PF04539	Sigma-70 region 3
CLI98_RS18055	PF04542	Sigma-70 region 2
CLI98_RS18055	PF04545	Sigma-70, region 4
CLI98_RS18065	PF00318	Ribosomal protein S2
CLI98_RS18070	PF00889	Elongation factor TS
CLI98_RS18075	PF00696	Amino acid kinase family
CLI98_RS18080	PF01765	Ribosome recycling factor
CLI98_RS18085	PF01255	Putative undecaprenyl diphosphate synthase
CLI98_RS18090	PF01148	Cytidylyltransferase family
CLI98_RS18095	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
CLI98_RS18095	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
CLI98_RS18095	PF13288	DXP reductoisomerase C-terminal domain
CLI98_RS18100	PF02163	Peptidase family M50
CLI98_RS18100	PF13180	PDZ domain
CLI98_RS18105	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CLI98_RS18105	PF03129	Anticodon binding domain
CLI98_RS18105	PF04073	Aminoacyl-tRNA editing domain
CLI98_RS18110	PF00929	Exonuclease
CLI98_RS18110	PF02811	PHP domain
CLI98_RS18110	PF07733	Bacterial DNA polymerase III alpha subunit
CLI98_RS18110	PF11490	CLI98_RS18110
CLI98_RS18110	PF14480	CLI98_RS18110
CLI98_RS18110	PF14579	Helix-hairpin-helix motif
CLI98_RS18115	PF02576	Uncharacterised BCR, YhbC family COG0779
CLI98_RS18115	PF17384	CLI98_RS18115
CLI98_RS18120	PF00575	S1 RNA binding domain
CLI98_RS18120	PF08529	NusA N-terminal domain
CLI98_RS18120	PF13184	NusA-like KH domain
CLI98_RS18125	PF04296	Protein of unknown function (DUF448)
CLI98_RS18130	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
CLI98_RS18135	PF00009	Elongation factor Tu GTP binding domain
CLI98_RS18135	PF04760	Translation initiation factor IF-2, N-terminal region
CLI98_RS18135	PF11987	Translation-initiation factor 2
CLI98_RS18140	PF04456	Protein of unknown function (DUF503)
CLI98_RS18145	PF02033	Ribosome-binding factor A
CLI98_RS18150	PF01509	TruB family pseudouridylate synthase (N terminal domain)
CLI98_RS18150	PF16198	CLI98_RS18150
CLI98_RS18155	PF01687	Riboflavin kinase
CLI98_RS18155	PF06574	FAD synthetase
CLI98_RS18160	PF00312	Ribosomal protein S15
CLI98_RS18165	PF00013	KH domain
CLI98_RS18165	PF00575	S1 RNA binding domain
CLI98_RS18165	PF01138	3' exoribonuclease family, domain 1
CLI98_RS18165	PF03725	3' exoribonuclease family, domain 2
CLI98_RS18165	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
CLI98_RS18170	PF01522	Polysaccharide deacetylase
CLI98_RS18170	PF12229	Putative peptidoglycan binding domain
CLI98_RS18175	PF00675	Insulinase (Peptidase family M16)
CLI98_RS18175	PF05193	Peptidase M16 inactive domain
CLI98_RS18180	PF05239	PRC-barrel domain
CLI98_RS18185	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
CLI98_RS18185	PF16924	CLI98_RS18185
CLI98_RS18190	PF02441	Flavoprotein
CLI98_RS18195	PF01118	Semialdehyde dehydrogenase, NAD binding domain
CLI98_RS18195	PF02774	Semialdehyde dehydrogenase, dimerisation domain
CLI98_RS18200	PF00696	Amino acid kinase family
CLI98_RS18200	PF13840	ACT domain
CLI98_RS18205	PF00701	Dihydrodipicolinate synthetase family
CLI98_RS18210	PF00753	Metallo-beta-lactamase superfamily
CLI98_RS18210	PF07521	RNA-metabolising metallo-beta-lactamase
CLI98_RS18215	PF00574	Clp protease
CLI98_RS18220	PF14035	CLI98_RS18220
CLI98_RS18225	PF01580	FtsK/SpoIIIE family
CLI98_RS18225	PF09397	Ftsk gamma domain
CLI98_RS18230	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS18230	PF07702	UTRA domain
CLI98_RS18235	PF07690	Major Facilitator Superfamily
CLI98_RS18240	PF01047	MarR family
CLI98_RS18245	PF03176	MMPL family
CLI98_RS18250	PF05193	Peptidase M16 inactive domain
CLI98_RS18255	PF00675	Insulinase (Peptidase family M16)
CLI98_RS18255	PF05193	Peptidase M16 inactive domain
CLI98_RS18260	PF13561	Enoyl-(Acyl carrier protein) reductase
CLI98_RS18265	PF11588	Protein of unknown function (DUF3243)
CLI98_RS18270	PF11868	CLI98_RS18270
CLI98_RS18275	PF13413	Helix-turn-helix domain
CLI98_RS18275	PF13464	CLI98_RS18275
CLI98_RS18280	PF01066	CDP-alcohol phosphatidyltransferase
CLI98_RS18285	PF00994	Probable molybdopterin binding domain
CLI98_RS18285	PF02464	Competence-damaged protein
CLI98_RS18290	PF00154	recA bacterial DNA recombination protein
CLI98_RS18295	PF00144	Beta-lactamase
CLI98_RS18300	PF00013	KH domain
CLI98_RS18300	PF01966	HD domain
CLI98_RS18300	PF12072	CLI98_RS18300
CLI98_RS18305	PF13277	YmdB-like protein
CLI98_RS18310	PF04232	Stage V sporulation protein S (SpoVS)
CLI98_RS18315	PF00107	Zinc-binding dehydrogenase
CLI98_RS18315	PF08240	Alcohol dehydrogenase GroES-like domain
CLI98_RS18320	PF00155	Aminotransferase class I and II
CLI98_RS18325	PF00919	Uncharacterized protein family UPF0004
CLI98_RS18325	PF01938	TRAM domain
CLI98_RS18325	PF04055	Radical SAM superfamily
CLI98_RS18330	PF06133	Protein of unknown function (DUF964)
CLI98_RS18335	PF10628	CLI98_RS18335
CLI98_RS18340	PF00488	MutS domain V
CLI98_RS18340	PF01624	MutS domain I
CLI98_RS18340	PF05188	MutS domain II
CLI98_RS18340	PF05190	MutS family domain IV
CLI98_RS18340	PF05192	MutS domain III
CLI98_RS18345	PF01119	DNA mismatch repair protein, C-terminal domain
CLI98_RS18345	PF08676	MutL C terminal dimerisation domain
CLI98_RS18345	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS18390	PF00753	Metallo-beta-lactamase superfamily
CLI98_RS18395	PF00698	Acyl transferase domain
CLI98_RS18400	PF00698	Acyl transferase domain
CLI98_RS18405	PF00698	Acyl transferase domain
CLI98_RS18410	PF00550	Phosphopantetheine attachment site
CLI98_RS18415	PF01154	Hydroxymethylglutaryl-coenzyme A synthase N terminal
CLI98_RS18415	PF08540	Hydroxymethylglutaryl-coenzyme A synthase C terminal
CLI98_RS18420	PF00378	Enoyl-CoA hydratase/isomerase family
CLI98_RS18425	PF00378	Enoyl-CoA hydratase/isomerase family
CLI98_RS18430	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS18430	PF00501	AMP-binding enzyme
CLI98_RS18430	PF00550	Phosphopantetheine attachment site
CLI98_RS18430	PF00668	Condensation domain
CLI98_RS18430	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS18430	PF08659	KR domain
CLI98_RS18430	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS18430	PF14765	Polyketide synthase dehydratase
CLI98_RS18430	PF16197	CLI98_RS18430
CLI98_RS18435	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS18435	PF00550	Phosphopantetheine attachment site
CLI98_RS18435	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS18435	PF08659	KR domain
CLI98_RS18435	PF14765	Polyketide synthase dehydratase
CLI98_RS18435	PF16197	CLI98_RS18435
CLI98_RS18440	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS18440	PF00550	Phosphopantetheine attachment site
CLI98_RS18440	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS18440	PF08242	Methyltransferase domain
CLI98_RS18440	PF08659	KR domain
CLI98_RS18440	PF14765	Polyketide synthase dehydratase
CLI98_RS18440	PF16197	CLI98_RS18440
CLI98_RS18445	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS18445	PF00501	AMP-binding enzyme
CLI98_RS18445	PF00550	Phosphopantetheine attachment site
CLI98_RS18445	PF00668	Condensation domain
CLI98_RS18445	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS18445	PF08659	KR domain
CLI98_RS18445	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS18445	PF14765	Polyketide synthase dehydratase
CLI98_RS18445	PF16197	CLI98_RS18445
CLI98_RS18450	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS18450	PF00550	Phosphopantetheine attachment site
CLI98_RS18450	PF00975	Thioesterase domain
CLI98_RS18450	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS18450	PF08242	Methyltransferase domain
CLI98_RS18450	PF14765	Polyketide synthase dehydratase
CLI98_RS18450	PF16197	CLI98_RS18450
CLI98_RS18455	PF00067	Cytochrome P450
CLI98_RS18460	PF14040	CLI98_RS18460
CLI98_RS18465	PF06912	CLI98_RS18465
CLI98_RS18475	PF00082	Subtilase family
CLI98_RS18485	PF05908	Protein of unknown function (DUF867)
CLI98_RS18490	PF02566	OsmC-like protein
CLI98_RS18495	PF00893	Small Multidrug Resistance protein
CLI98_RS18500	PF00893	Small Multidrug Resistance protein
CLI98_RS18510	PF12788	CLI98_RS18510
CLI98_RS18515	PF01715	IPP transferase
CLI98_RS18520	PF17209	CLI98_RS18520
CLI98_RS18525	PF14157	YmzC-like protein
CLI98_RS18535	PF07972	NrdI Flavodoxin like
CLI98_RS18540	PF00317	Ribonucleotide reductase, all-alpha domain
CLI98_RS18540	PF02867	Ribonucleotide reductase, barrel domain
CLI98_RS18540	PF08343	Ribonucleotide reductase N-terminal
CLI98_RS18545	PF00268	Ribonucleotide reductase, small chain
CLI98_RS18555	PF01520	N-acetylmuramoyl-L-alanine amidase
CLI98_RS18555	PF05036	Sporulation related domain
CLI98_RS18565	PF00004	ATPase family associated with various cellular activities (AAA)
CLI98_RS18570	PF01926	50S ribosome-binding GTPase
CLI98_RS18570	PF13167	CLI98_RS18570
CLI98_RS18570	PF16360	CLI98_RS18570
CLI98_RS18575	PF06838	Methionine gamma-lyase
CLI98_RS18580	PF13411	MerR HTH family regulatory protein
CLI98_RS18585	PF00120	Glutamine synthetase, catalytic domain
CLI98_RS18585	PF03951	Glutamine synthetase, beta-Grasp domain
CLI98_RS18615	PF03022	Major royal jelly protein
CLI98_RS18625	PF13347	MFS/sugar transport protein
CLI98_RS18630	PF04616	Glycosyl hydrolases family 43
CLI98_RS18635	PF00480	ROK family
CLI98_RS18635	PF13412	Winged helix-turn-helix DNA-binding
CLI98_RS18640	PF01261	Xylose isomerase-like TIM barrel
CLI98_RS18645	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CLI98_RS18645	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CLI98_RS18650	PF00391	PEP-utilising enzyme, mobile domain
CLI98_RS18650	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
CLI98_RS18660	PF09680	CLI98_RS18660
CLI98_RS18680	PF08279	HTH domain
CLI98_RS18680	PF13280	CLI98_RS18680
CLI98_RS18685	PF05163	DinB family
CLI98_RS18690	PF00107	Zinc-binding dehydrogenase
CLI98_RS18690	PF08240	Alcohol dehydrogenase GroES-like domain
CLI98_RS18710	PF17094	CLI98_RS18710
CLI98_RS18715	PF00583	Acetyltransferase (GNAT) family
CLI98_RS18715	PF14268	CLI98_RS18715
CLI98_RS18720	PF04740	CLI98_RS18720
CLI98_RS18725	PF14568	SMI1-KNR4 cell-wall
CLI98_RS18750	PF16302	CLI98_RS18750
CLI98_RS18760	PF13021	CLI98_RS18760
CLI98_RS18765	PF00296	Luciferase-like monooxygenase
CLI98_RS18770	PF03067	Chitin binding domain
CLI98_RS18775	PF09680	CLI98_RS18775
CLI98_RS18780	PF13302	Acetyltransferase (GNAT) domain
CLI98_RS18790	PF11962	Peptidase_G2, IMC autoproteolytic cleavage domain
CLI98_RS18790	PF12708	Pectate lyase superfamily protein
CLI98_RS18800	PF00692	dUTPase
CLI98_RS18805	PF05908	Protein of unknown function (DUF867)
CLI98_RS18810	PF01145	SPFH domain / Band 7 family
CLI98_RS18815	PF10710	CLI98_RS18815
CLI98_RS18825	PF00717	Peptidase S24-like
CLI98_RS18825	PF01726	LexA DNA binding domain
CLI98_RS18830	PF01476	LysM domain
CLI98_RS18835	PF00239	Resolvase, N terminal domain
CLI98_RS18840	PF05979	Bacterial protein of unknown function (DUF896)
CLI98_RS18845	PF00456	Transketolase, thiamine diphosphate binding domain
CLI98_RS18845	PF02779	Transketolase, pyrimidine binding domain
CLI98_RS18845	PF02780	Transketolase, C-terminal domain
CLI98_RS18850	PF10747	Protein of unknown function (DUF2522)
CLI98_RS18855	PF03672	CLI98_RS18855
CLI98_RS18860	PF09388	Spo0E like sporulation regulatory protein
CLI98_RS18865	PF02683	CLI98_RS18865
CLI98_RS18870	PF00072	Response regulator receiver domain
CLI98_RS18875	PF07301	CLI98_RS18875
CLI98_RS18880	PF11084	CLI98_RS18880
CLI98_RS18890	PF08179	CLI98_RS18890
CLI98_RS18895	PF08175	CLI98_RS18895
CLI98_RS18900	PF00330	Aconitase family (aconitate hydratase)
CLI98_RS18900	PF00694	Aconitase C-terminal domain
CLI98_RS18905	PF00578	AhpC/TSA family
CLI98_RS18910	PF13040	CLI98_RS18910
CLI98_RS18915	PF08177	CLI98_RS18915
CLI98_RS18925	PF03061	Thioesterase superfamily
CLI98_RS18940	PF02660	CLI98_RS18940
CLI98_RS18945	PF13380	CoA binding domain
CLI98_RS18950	PF00204	DNA gyrase B
CLI98_RS18950	PF00986	DNA gyrase B subunit, carboxyl terminus
CLI98_RS18950	PF01751	Toprim domain
CLI98_RS18950	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS18955	PF00521	DNA gyrase/topoisomerase IV, subunit A
CLI98_RS18955	PF03989	DNA gyrase C-terminal domain, beta-propeller
CLI98_RS18965	PF01235	CLI98_RS18965
CLI98_RS18970	PF00294	pfkB family carbohydrate kinase
CLI98_RS18975	PF00107	Zinc-binding dehydrogenase
CLI98_RS18975	PF08240	Alcohol dehydrogenase GroES-like domain
CLI98_RS18980	PF01081	KDPG and KHG aldolase
CLI98_RS18985	PF03786	D-mannonate dehydratase (UxuA)
CLI98_RS18990	PF00106	short chain dehydrogenase
CLI98_RS18995	PF00356	Bacterial regulatory proteins, lacI family
CLI98_RS18995	PF13377	Periplasmic binding protein-like domain
CLI98_RS19000	PF07690	Major Facilitator Superfamily
CLI98_RS19010	PF13761	CLI98_RS19010
CLI98_RS19015	PF14158	CLI98_RS19015
CLI98_RS19020	PF07690	Major Facilitator Superfamily
CLI98_RS19030	PF03403	Platelet-activating factor acetylhydrolase, isoform II
CLI98_RS19035	PF00150	Cellulase (glycosyl hydrolase family 5)
CLI98_RS19035	PF00942	Cellulose binding domain
CLI98_RS19040	PF09685	CLI98_RS19040
CLI98_RS19045	PF00512	His Kinase A (phospho-acceptor) domain
CLI98_RS19045	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLI98_RS19050	PF00072	Response regulator receiver domain
CLI98_RS19050	PF00486	Transcriptional regulatory protein, C terminal
CLI98_RS19055	PF02055	O-Glycosyl hydrolase family 30
CLI98_RS19055	PF17189	CLI98_RS19055
CLI98_RS19060	PF03422	Carbohydrate binding module (family 6)
CLI98_RS19060	PF04616	Glycosyl hydrolases family 43
CLI98_RS19065	PF00501	AMP-binding enzyme
CLI98_RS19065	PF00550	Phosphopantetheine attachment site
CLI98_RS19065	PF00668	Condensation domain
CLI98_RS19065	PF00975	Thioesterase domain
CLI98_RS19065	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS19070	PF00501	AMP-binding enzyme
CLI98_RS19070	PF00550	Phosphopantetheine attachment site
CLI98_RS19070	PF00668	Condensation domain
CLI98_RS19070	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS19075	PF00109	Beta-ketoacyl synthase, N-terminal domain
CLI98_RS19075	PF00202	Aminotransferase class-III
CLI98_RS19075	PF00501	AMP-binding enzyme
CLI98_RS19075	PF00550	Phosphopantetheine attachment site
CLI98_RS19075	PF00668	Condensation domain
CLI98_RS19075	PF02801	Beta-ketoacyl synthase, C-terminal domain
CLI98_RS19075	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS19075	PF16197	CLI98_RS19075
CLI98_RS19080	PF00698	Acyl transferase domain
CLI98_RS19085	PF13561	Enoyl-(Acyl carrier protein) reductase
CLI98_RS19090	PF01144	Coenzyme A transferase
CLI98_RS19095	PF01144	Coenzyme A transferase
CLI98_RS19100	PF02447	CLI98_RS19100
CLI98_RS19105	PF00067	Cytochrome P450
CLI98_RS19110	PF04055	Radical SAM superfamily
CLI98_RS19110	PF06968	Biotin and Thiamin Synthesis associated domain
CLI98_RS19115	PF13500	AAA domain
CLI98_RS19120	PF00155	Aminotransferase class I and II
CLI98_RS19125	PF00202	Aminotransferase class-III
CLI98_RS19130	PF03744	CLI98_RS19130
CLI98_RS19135	PF04138	CLI98_RS19135
CLI98_RS19140	PF00483	Nucleotidyl transferase
CLI98_RS19145	PF09335	CLI98_RS19145
CLI98_RS19150	PF01039	Carboxyl transferase domain
CLI98_RS19155	PF00378	Enoyl-CoA hydratase/isomerase family
CLI98_RS19160	PF00682	HMGL-like
CLI98_RS19165	PF00364	Biotin-requiring enzyme
CLI98_RS19170	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
CLI98_RS19170	PF02785	Biotin carboxylase C-terminal domain
CLI98_RS19170	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CLI98_RS19175	PF00501	AMP-binding enzyme
CLI98_RS19175	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS19180	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
CLI98_RS19180	PF02770	Acyl-CoA dehydrogenase, middle domain
CLI98_RS19180	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
CLI98_RS19185	PF02638	CLI98_RS19185
CLI98_RS19190	PF07098	CLI98_RS19190
CLI98_RS19195	PF00501	AMP-binding enzyme
CLI98_RS19195	PF00550	Phosphopantetheine attachment site
CLI98_RS19195	PF00668	Condensation domain
CLI98_RS19195	PF00975	Thioesterase domain
CLI98_RS19195	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS19200	PF00501	AMP-binding enzyme
CLI98_RS19200	PF00550	Phosphopantetheine attachment site
CLI98_RS19200	PF00668	Condensation domain
CLI98_RS19200	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS19205	PF00501	AMP-binding enzyme
CLI98_RS19205	PF00550	Phosphopantetheine attachment site
CLI98_RS19205	PF00668	Condensation domain
CLI98_RS19205	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS19210	PF00501	AMP-binding enzyme
CLI98_RS19210	PF00550	Phosphopantetheine attachment site
CLI98_RS19210	PF00668	Condensation domain
CLI98_RS19210	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS19215	PF00501	AMP-binding enzyme
CLI98_RS19215	PF00550	Phosphopantetheine attachment site
CLI98_RS19215	PF00668	Condensation domain
CLI98_RS19215	PF13193	AMP-binding enzyme C-terminal domain
CLI98_RS19220	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
CLI98_RS19225	PF01263	Aldose 1-epimerase
CLI98_RS19230	PF01554	MatE
CLI98_RS19235	PF16800	CLI98_RS19235
CLI98_RS19245	PF00589	Phage integrase family
CLI98_RS19250	PF12728	Helix-turn-helix domain
CLI98_RS19255	PF01019	Gamma-glutamyltranspeptidase
CLI98_RS19260	PF07690	Major Facilitator Superfamily
CLI98_RS19265	PF12840	Helix-turn-helix domain
CLI98_RS19270	PF03129	Anticodon binding domain
CLI98_RS19275	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CLI98_RS19275	PF03466	LysR substrate binding domain
CLI98_RS19280	PF00107	Zinc-binding dehydrogenase
CLI98_RS19280	PF08240	Alcohol dehydrogenase GroES-like domain
CLI98_RS19290	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CLI98_RS19290	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
CLI98_RS19295	PF00310	Glutamine amidotransferases class-II
CLI98_RS19295	PF01493	GXGXG motif
CLI98_RS19295	PF01645	Conserved region in glutamate synthase
CLI98_RS19295	PF04898	Glutamate synthase central domain
CLI98_RS19300	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CLI98_RS19300	PF03466	LysR substrate binding domain
CLI98_RS19305	PF00696	Amino acid kinase family
CLI98_RS19305	PF01472	PUA domain
CLI98_RS19310	PF03807	NADP oxidoreductase coenzyme F420-dependent
CLI98_RS19310	PF14748	Pyrroline-5-carboxylate reductase dimerisation
CLI98_RS19315	PF02334	Replication terminator protein
CLI98_RS19320	PF00106	short chain dehydrogenase
CLI98_RS19335	PF07690	Major Facilitator Superfamily
CLI98_RS19340	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CLI98_RS19340	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CLI98_RS19345	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CLI98_RS19345	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CLI98_RS19350	PF00384	Molybdopterin oxidoreductase
CLI98_RS19350	PF01568	Molydopterin dinucleotide binding domain
CLI98_RS19350	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CLI98_RS19365	PF12802	MarR family
CLI98_RS19375	PF14567	SMI1-KNR4 cell-wall
CLI98_RS19380	PF04740	CLI98_RS19380
CLI98_RS19380	PF14411	CLI98_RS19380
CLI98_RS19385	PF01588	Putative tRNA binding domain
CLI98_RS19390	PF07883	Cupin domain
CLI98_RS19390	PF12833	Helix-turn-helix domain
CLI98_RS19395	PF00440	Bacterial regulatory proteins, tetR family
CLI98_RS19395	PF13305	WHG domain
CLI98_RS19400	PF00753	Metallo-beta-lactamase superfamily
CLI98_RS19410	PF01022	Bacterial regulatory protein, arsR family
CLI98_RS19415	PF13702	Lysozyme-like
CLI98_RS19420	PF04238	CLI98_RS19420
CLI98_RS19435	PF02016	LD-carboxypeptidase
CLI98_RS19445	PF01476	LysM domain
CLI98_RS19445	PF06725	3D domain
CLI98_RS19450	PF00270	DEAD/DEAH box helicase
CLI98_RS19450	PF00271	Helicase conserved C-terminal domain
CLI98_RS19450	PF00570	HRDC domain
CLI98_RS19450	PF09382	RQC domain
CLI98_RS19450	PF16124	CLI98_RS19450
CLI98_RS19460	PF02525	Flavodoxin-like fold
CLI98_RS19465	PF01258	Prokaryotic dksA/traR C4-type zinc finger
CLI98_RS19470	PF10737	CLI98_RS19470
CLI98_RS19480	PF00011	Hsp20/alpha crystallin family
CLI98_RS19495	PF08000	Bacterial PH domain
CLI98_RS19500	PF13217	CLI98_RS19500
CLI98_RS19510	PF00171	Aldehyde dehydrogenase family
CLI98_RS19515	PF13243	Prenyltransferase-like
CLI98_RS19515	PF13249	Prenyltransferase-like
CLI98_RS19520	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
CLI98_RS19520	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
CLI98_RS19525	PF00209	Sodium:neurotransmitter symporter family
CLI98_RS19530	PF01758	Sodium Bile acid symporter family
CLI98_RS19535	PF00753	Metallo-beta-lactamase superfamily
CLI98_RS19540	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CLI98_RS19540	PF00364	Biotin-requiring enzyme
CLI98_RS19540	PF02817	e3 binding domain
CLI98_RS19545	PF00676	Dehydrogenase E1 component
CLI98_RS19545	PF02779	Transketolase, pyrimidine binding domain
CLI98_RS19545	PF16870	CLI98_RS19545
CLI98_RS19550	PF00092	von Willebrand factor type A domain
CLI98_RS19555	PF07728	AAA domain (dynein-related subfamily)
CLI98_RS19560	PF00080	Copper/zinc superoxide dismutase (SODC)
CLI98_RS19565	PF00877	NlpC/P60 family
CLI98_RS19565	PF01476	LysM domain
CLI98_RS19570	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
CLI98_RS19575	PF02457	DisA bacterial checkpoint controller nucleotide-binding
CLI98_RS19575	PF10372	Bacterial membrane-spanning protein N-terminus
CLI98_RS19580	PF01554	MatE
CLI98_RS19585	PF01740	STAS domain
CLI98_RS19590	PF02585	GlcNAc-PI de-N-acetylase
CLI98_RS19595	PF08830	Protein of unknown function (DUF1806)
CLI98_RS19605	PF00892	EamA-like transporter family
CLI98_RS19620	PF14552	Tautomerase enzyme
CLI98_RS19630	PF01638	HxlR-like helix-turn-helix
CLI98_RS19635	PF00881	Nitroreductase family
CLI98_RS19640	PF01738	Dienelactone hydrolase family
CLI98_RS19645	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CLI98_RS19650	PF11755	CLI98_RS19650
CLI98_RS19655	PF00474	Sodium:solute symporter family
CLI98_RS19660	PF02055	O-Glycosyl hydrolase family 30
CLI98_RS19660	PF17189	CLI98_RS19660
CLI98_RS19665	PF00232	Glycosyl hydrolase family 1
CLI98_RS19670	PF00392	Bacterial regulatory proteins, gntR family
CLI98_RS19670	PF07702	UTRA domain
CLI98_RS19675	PF00595	PDZ domain (Also known as DHR or GLGF)
CLI98_RS19675	PF01471	Putative peptidoglycan binding domain
CLI98_RS19675	PF03572	Peptidase family S41
CLI98_RS19680	PF08241	Methyltransferase domain
CLI98_RS19690	PF02557	D-alanyl-D-alanine carboxypeptidase
CLI98_RS19695	PF01048	Phosphorylase superfamily
CLI98_RS19705	PF14191	CLI98_RS19705
CLI98_RS19710	PF01569	PAP2 superfamily
CLI98_RS19715	PF14162	CLI98_RS19715
CLI98_RS19735	PF06855	Protein of unknown function (DUF1250)
CLI98_RS19740	PF14122	CLI98_RS19740
CLI98_RS19745	PF12544	Lysine-2,3-aminomutase
CLI98_RS19750	PF00583	Acetyltransferase (GNAT) family