CLI98_RS00010	SM00882	Coenzyme A transferase
CLI98_RS00015	SM00882	Coenzyme A transferase
CLI98_RS00025	SM00871	Bacterial transcription activator, effector binding domain
CLI98_RS00080	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS00110	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS00155	SM00567	E-Z type HEAT repeats
CLI98_RS00155	SM00932	Scaffold protein Nfu/NifU N terminal
CLI98_RS00160	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI98_RS00180	SM00357	Cold shock protein domain
CLI98_RS00220	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CLI98_RS00220	SM00475	5'-3' exonuclease
CLI98_RS00305	SM00491	CLI98_RS00305
CLI98_RS00320	SM00981	CLI98_RS00320
CLI98_RS00350	SM00487	DEAD-like helicases superfamily
CLI98_RS00350	SM00490	helicase superfamily c-terminal domain
CLI98_RS00400	SM00060	Fibronectin type 3 domain
CLI98_RS00410	SM00478	endonuclease III
CLI98_RS00440	SM00479	CLI98_RS00440
CLI98_RS00440	SM00487	DEAD-like helicases superfamily
CLI98_RS00440	SM00491	CLI98_RS00440
CLI98_RS00480	SM00851	MGS-like domain
CLI98_RS00500	SM00835	Cupin
CLI98_RS00535	SM00914	CLI98_RS00535
CLI98_RS00540	SM00028	Tetratricopeptide repeats
CLI98_RS00605	SM00138	Methyltransferase, chemotaxis proteins 
CLI98_RS00610	SM00562	CLI98_RS00610
CLI98_RS00640	SM00411	bacterial (prokaryotic) histone like domain
CLI98_RS00685	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI98_RS00725	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CLI98_RS00745	SM00257	Lysin motif
CLI98_RS00755	SM00487	DEAD-like helicases superfamily
CLI98_RS00755	SM00490	helicase superfamily c-terminal domain
CLI98_RS00790	SM00091	PAS domain
CLI98_RS00790	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI98_RS00790	SM00387	Histidine kinase-like ATPases
CLI98_RS00790	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS00795	SM00448	cheY-homologous receiver domain
CLI98_RS00795	SM00862	Transcriptional regulatory protein, C terminal
CLI98_RS00815	SM00363	S4 RNA-binding domain
CLI98_RS00830	SM00936	Penicillin-binding protein 5, C-terminal domain 
CLI98_RS00960	SM00387	Histidine kinase-like ATPases
CLI98_RS00970	SM00936	Penicillin-binding protein 5, C-terminal domain 
CLI98_RS01015	SM00919	Malic enzyme, NAD binding domain
CLI98_RS01015	SM01274	CLI98_RS01015
CLI98_RS01030	SM00870	CLI98_RS01030
CLI98_RS01035	SM00530	Helix-turn-helix XRE-family like proteins 
CLI98_RS01140	SM00849	Metallo-beta-lactamase superfamily
CLI98_RS01165	SM00823	Phosphopantetheine attachment site
CLI98_RS01165	SM00825	Beta-ketoacyl synthase
CLI98_RS01165	SM00829	Enoylreductase
CLI98_RS01165	SM01294	CLI98_RS01165
CLI98_RS01170	SM00822	CLI98_RS01170
CLI98_RS01170	SM00823	Phosphopantetheine attachment site
CLI98_RS01170	SM00825	Beta-ketoacyl synthase
CLI98_RS01170	SM00826	CLI98_RS01170
CLI98_RS01175	SM00822	CLI98_RS01175
CLI98_RS01175	SM00823	Phosphopantetheine attachment site
CLI98_RS01175	SM00825	Beta-ketoacyl synthase
CLI98_RS01175	SM01294	CLI98_RS01175
CLI98_RS01180	SM00822	CLI98_RS01180
CLI98_RS01180	SM00823	Phosphopantetheine attachment site
CLI98_RS01180	SM00825	Beta-ketoacyl synthase
CLI98_RS01180	SM00826	CLI98_RS01180
CLI98_RS01180	SM01294	CLI98_RS01180
CLI98_RS01185	SM00822	CLI98_RS01185
CLI98_RS01185	SM00823	Phosphopantetheine attachment site
CLI98_RS01185	SM00825	Beta-ketoacyl synthase
CLI98_RS01185	SM00826	CLI98_RS01185
CLI98_RS01185	SM01294	CLI98_RS01185
CLI98_RS01190	SM00822	CLI98_RS01190
CLI98_RS01190	SM00823	Phosphopantetheine attachment site
CLI98_RS01190	SM00825	Beta-ketoacyl synthase
CLI98_RS01190	SM01294	CLI98_RS01190
CLI98_RS01195	SM00822	CLI98_RS01195
CLI98_RS01195	SM00823	Phosphopantetheine attachment site
CLI98_RS01195	SM00825	Beta-ketoacyl synthase
CLI98_RS01195	SM00826	CLI98_RS01195
CLI98_RS01195	SM01294	CLI98_RS01195
CLI98_RS01220	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CLI98_RS01230	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CLI98_RS01275	SM01350	CLI98_RS01275
CLI98_RS01320	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS01330	SM00062	Bacterial periplasmic substrate-binding proteins
CLI98_RS01330	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CLI98_RS01340	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CLI98_RS01350	SM00861	Transketolase, pyrimidine binding domain
CLI98_RS01370	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CLI98_RS01380	SM00091	PAS domain
CLI98_RS01380	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS01425	SM00646	CLI98_RS01425
CLI98_RS01440	SM00530	Helix-turn-helix XRE-family like proteins 
CLI98_RS01460	SM01005	Alanine racemase, C-terminal domain
CLI98_RS01465	SM00448	cheY-homologous receiver domain
CLI98_RS01470	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI98_RS01485	SM00363	S4 RNA-binding domain
CLI98_RS01490	SM00861	Transketolase, pyrimidine binding domain
CLI98_RS01525	SM00878	Biotin carboxylase C-terminal domain
CLI98_RS01570	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS01580	SM00841	Elongation factor P, C-terminal
CLI98_RS01580	SM01185	CLI98_RS01580
CLI98_RS01610	SM00529	Helix-turn-helix diphteria tox regulatory element
CLI98_RS01620	SM00450	Rhodanese Homology Domain
CLI98_RS01640	SM00487	DEAD-like helicases superfamily
CLI98_RS01640	SM00490	helicase superfamily c-terminal domain
CLI98_RS01655	SM00530	Helix-turn-helix XRE-family like proteins 
CLI98_RS01715	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS01725	SM01091	Transporter associated domain
CLI98_RS01750	SM00849	Metallo-beta-lactamase superfamily
CLI98_RS01770	SM00631	CLI98_RS01770
CLI98_RS01815	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS01820	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS01865	SM00257	Lysin motif
CLI98_RS01900	SM00518	AP endonuclease family 2
CLI98_RS01905	SM00487	DEAD-like helicases superfamily
CLI98_RS01905	SM00490	helicase superfamily c-terminal domain
CLI98_RS01940	SM00400	zinc finger
CLI98_RS01940	SM00493	CLI98_RS01940
CLI98_RS01955	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI98_RS02000	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI98_RS02050	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI98_RS02065	SM00271	DnaJ molecular chaperone homology domain
CLI98_RS02085	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI98_RS02090	SM00838	Elongation factor G C-terminus
CLI98_RS02125	SM00849	Metallo-beta-lactamase superfamily
CLI98_RS02135	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CLI98_RS02155	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI98_RS02165	SM01103	CLI98_RS02165
CLI98_RS02235	SM00342	helix_turn_helix, arabinose operon control protein
CLI98_RS02235	SM00871	Bacterial transcription activator, effector binding domain
CLI98_RS02255	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS02260	SM00448	cheY-homologous receiver domain
CLI98_RS02260	SM00862	Transcriptional regulatory protein, C terminal
CLI98_RS02295	SM00860	SMI1 / KNR4 family
CLI98_RS02385	SM00849	Metallo-beta-lactamase superfamily
CLI98_RS02440	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CLI98_RS02440	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CLI98_RS02525	SM00732	Likely ribonuclease with RNase H fold.
CLI98_RS02535	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CLI98_RS02545	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS02550	SM00062	Bacterial periplasmic substrate-binding proteins
CLI98_RS02550	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CLI98_RS02580	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS02585	SM00028	Tetratricopeptide repeats
CLI98_RS02605	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS02635	SM00287	Bacterial SH3 domain homologues
CLI98_RS02635	SM00646	CLI98_RS02635
CLI98_RS02645	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI98_RS02645	SM00954	Region found in RelA / SpoT proteins
CLI98_RS02695	SM01323	CLI98_RS02695
CLI98_RS02715	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS02720	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CLI98_RS02740	SM00257	Lysin motif
CLI98_RS02785	SM01317	CLI98_RS02785
CLI98_RS02880	SM00257	Lysin motif
CLI98_RS02890	SM01004	Delta-aminolevulinic acid dehydratase
CLI98_RS02925	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS02925	SM00464	Found in ATP-dependent protease La (LON)
CLI98_RS02930	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS02935	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS02935	SM00994	ClpX C4-type zinc finger
CLI98_RS02935	SM01086	C-terminal, D2-small domain, of ClpB protein
CLI98_RS02960	SM01329	CLI98_RS02960
CLI98_RS02965	SM00917	LeuA allosteric (dimerisation) domain
CLI98_RS03010	SM00487	DEAD-like helicases superfamily
CLI98_RS03010	SM00490	helicase superfamily c-terminal domain
CLI98_RS03050	SM00909	Sporulation and spore germination
CLI98_RS03060	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS03065	SM00421	helix_turn_helix, Lux Regulon
CLI98_RS03105	SM00465	GIY-YIG type nucleases (URI domain)
CLI98_RS03115	SM00813	Alpha-L-arabinofuranosidase C-terminus
CLI98_RS03120	SM00893	Electron transfer flavoprotein domain
CLI98_RS03125	SM00893	Electron transfer flavoprotein domain
CLI98_RS03155	SM00463	Small MutS-related domain
CLI98_RS03155	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CLI98_RS03155	SM00534	ATPase domain of DNA mismatch repair MUTS family
CLI98_RS03160	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CLI98_RS03160	SM00481	DNA polymerase alpha chain like domain
CLI98_RS03160	SM00483	DNA polymerase X family
CLI98_RS03180	SM00873	B3/4 domain
CLI98_RS03180	SM00874	tRNA synthetase B5 domain
CLI98_RS03180	SM00896	Ferredoxin-fold anticodon binding domain
CLI98_RS03190	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CLI98_RS03220	SM00813	Alpha-L-arabinofuranosidase C-terminus
CLI98_RS03250	SM01007	Class II Aldolase and Adducin N-terminal domain
CLI98_RS03310	SM00448	cheY-homologous receiver domain
CLI98_RS03310	SM00850	LytTr DNA-binding domain
CLI98_RS03315	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CLI98_RS03315	SM00387	Histidine kinase-like ATPases
CLI98_RS03330	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CLI98_RS03345	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS03365	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CLI98_RS03395	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CLI98_RS03395	SM01232	CLI98_RS03395
CLI98_RS03400	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CLI98_RS03400	SM00474	3'-5' exonuclease
CLI98_RS03400	SM00475	5'-3' exonuclease
CLI98_RS03400	SM00482	DNA polymerase A domain
CLI98_RS03405	SM00091	PAS domain
CLI98_RS03405	SM00387	Histidine kinase-like ATPases
CLI98_RS03405	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS03410	SM00448	cheY-homologous receiver domain
CLI98_RS03410	SM00862	Transcriptional regulatory protein, C terminal
CLI98_RS03420	SM01329	CLI98_RS03420
CLI98_RS03430	SM00028	Tetratricopeptide repeats
CLI98_RS03490	SM00919	Malic enzyme, NAD binding domain
CLI98_RS03490	SM01274	CLI98_RS03490
CLI98_RS03495	SM00481	DNA polymerase alpha chain like domain
CLI98_RS03525	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI98_RS03530	SM00849	Metallo-beta-lactamase superfamily
CLI98_RS03555	SM00852	Probable molybdopterin binding domain
CLI98_RS03615	SM00981	CLI98_RS03615
CLI98_RS03650	SM00267	diguanylate cyclase
CLI98_RS03660	SM00363	S4 RNA-binding domain
CLI98_RS03660	SM01390	CLI98_RS03660
CLI98_RS03675	SM00491	CLI98_RS03675
CLI98_RS03730	SM00363	S4 RNA-binding domain
CLI98_RS03750	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI98_RS03770	SM00354	helix_turn _helix lactose operon repressor
CLI98_RS03775	SM00830	Chorismate mutase type II
CLI98_RS03800	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS03800	SM00843	CLI98_RS03800
CLI98_RS03835	SM00919	Malic enzyme, NAD binding domain
CLI98_RS03835	SM01274	CLI98_RS03835
CLI98_RS03840	SM00849	Metallo-beta-lactamase superfamily
CLI98_RS03860	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CLI98_RS03895	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS03900	SM00420	helix_turn_helix, Deoxyribose operon repressor
CLI98_RS03905	SM00363	S4 RNA-binding domain
CLI98_RS03930	SM00354	helix_turn _helix lactose operon repressor
CLI98_RS03960	SM00450	Rhodanese Homology Domain
CLI98_RS03975	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CLI98_RS03975	SM00091	PAS domain
CLI98_RS03995	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS04000	SM00387	Histidine kinase-like ATPases
CLI98_RS04005	SM00448	cheY-homologous receiver domain
CLI98_RS04005	SM00862	Transcriptional regulatory protein, C terminal
CLI98_RS04015	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS04035	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS04040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS04050	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI98_RS04120	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS04160	SM01234	CLI98_RS04160
CLI98_RS04165	SM00947	Carbonic anhydrase
CLI98_RS04200	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS04210	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CLI98_RS04375	SM00244	prohibitin homologues
CLI98_RS04420	SM00047	Lysozyme subfamily 2
CLI98_RS04465	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI98_RS04465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI98_RS04465	SM00319	Homologues of the ligand binding domain of Tar
CLI98_RS04470	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI98_RS04470	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI98_RS04470	SM00319	Homologues of the ligand binding domain of Tar
CLI98_RS04475	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI98_RS04475	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI98_RS04475	SM00319	Homologues of the ligand binding domain of Tar
CLI98_RS04480	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI98_RS04480	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI98_RS04480	SM00319	Homologues of the ligand binding domain of Tar
CLI98_RS04505	SM00642	Alpha-amylase domain
CLI98_RS04510	SM01091	Transporter associated domain
CLI98_RS04580	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI98_RS04590	SM00344	helix_turn_helix ASNC type
CLI98_RS04610	SM00387	Histidine kinase-like ATPases
CLI98_RS04610	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS04615	SM01298	CLI98_RS04615
CLI98_RS04620	SM00479	CLI98_RS04620
CLI98_RS04645	SM00091	PAS domain
CLI98_RS04645	SM00387	Histidine kinase-like ATPases
CLI98_RS04650	SM00448	cheY-homologous receiver domain
CLI98_RS04660	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS04720	SM00421	helix_turn_helix, Lux Regulon
CLI98_RS04720	SM00448	cheY-homologous receiver domain
CLI98_RS04725	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI98_RS04725	SM00387	Histidine kinase-like ATPases
CLI98_RS04755	SM00052	Putative diguanylate phosphodiesterase
CLI98_RS04795	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI98_RS04840	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CLI98_RS04840	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CLI98_RS04850	SM00923	MbtH-like protein
CLI98_RS04855	SM00823	Phosphopantetheine attachment site
CLI98_RS04855	SM00824	Thioesterase
CLI98_RS04875	SM00822	CLI98_RS04875
CLI98_RS04935	SM01240	CLI98_RS04935
CLI98_RS04950	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS05065	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI98_RS05110	SM00028	Tetratricopeptide repeats
CLI98_RS05145	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS05150	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS05150	SM00866	CLI98_RS05150
CLI98_RS05180	SM00422	helix_turn_helix, mercury resistance
CLI98_RS05190	SM00752	Horizontally Transferred TransMembrane Domain
CLI98_RS05205	SM00465	GIY-YIG type nucleases (URI domain)
CLI98_RS05260	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS05285	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS05285	SM00930	CLI98_RS05285
CLI98_RS05300	SM00493	CLI98_RS05300
CLI98_RS05355	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS05385	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS05410	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI98_RS05415	SM00448	cheY-homologous receiver domain
CLI98_RS05415	SM00862	Transcriptional regulatory protein, C terminal
CLI98_RS05420	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI98_RS05420	SM00387	Histidine kinase-like ATPases
CLI98_RS05420	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS05460	SM00421	helix_turn_helix, Lux Regulon
CLI98_RS05460	SM00448	cheY-homologous receiver domain
CLI98_RS05465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI98_RS05465	SM00387	Histidine kinase-like ATPases
CLI98_RS05500	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS05525	SM00387	Histidine kinase-like ATPases
CLI98_RS05525	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS05530	SM00448	cheY-homologous receiver domain
CLI98_RS05530	SM00862	Transcriptional regulatory protein, C terminal
CLI98_RS05550	SM00835	Cupin
CLI98_RS05560	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS05590	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS05715	SM00421	helix_turn_helix, Lux Regulon
CLI98_RS05715	SM00448	cheY-homologous receiver domain
CLI98_RS05725	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS05840	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS05855	SM00062	Bacterial periplasmic substrate-binding proteins
CLI98_RS05860	SM00062	Bacterial periplasmic substrate-binding proteins
CLI98_RS05900	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI98_RS05900	SM00357	Cold shock protein domain
CLI98_RS05900	SM00955	CLI98_RS05900
CLI98_RS05915	SM00530	Helix-turn-helix XRE-family like proteins 
CLI98_RS05920	SM00530	Helix-turn-helix XRE-family like proteins 
CLI98_RS05925	SM00530	Helix-turn-helix XRE-family like proteins 
CLI98_RS05935	SM00387	Histidine kinase-like ATPases
CLI98_RS05935	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS05940	SM00448	cheY-homologous receiver domain
CLI98_RS05940	SM00862	Transcriptional regulatory protein, C terminal
CLI98_RS05955	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS05975	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI98_RS05975	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS06000	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI98_RS06000	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS06035	SM01192	CLI98_RS06035
CLI98_RS06035	SM01193	CLI98_RS06035
CLI98_RS06060	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CLI98_RS06075	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS06135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS06135	SM00895	CLI98_RS06135
CLI98_RS06230	SM00530	Helix-turn-helix XRE-family like proteins 
CLI98_RS06315	SM00640	Glycosyl hydrolases family 32
CLI98_RS06325	SM00354	helix_turn _helix lactose operon repressor
CLI98_RS06340	SM00642	Alpha-amylase domain
CLI98_RS06370	SM00642	Alpha-amylase domain
CLI98_RS06375	SM00354	helix_turn _helix lactose operon repressor
CLI98_RS06395	SM00947	Carbonic anhydrase
CLI98_RS06455	SM00028	Tetratricopeptide repeats
CLI98_RS06460	SM00387	Histidine kinase-like ATPases
CLI98_RS06460	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS06465	SM00448	cheY-homologous receiver domain
CLI98_RS06465	SM00862	Transcriptional regulatory protein, C terminal
CLI98_RS06475	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS06555	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS06555	SM00866	CLI98_RS06555
CLI98_RS06595	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS06600	SM00487	DEAD-like helicases superfamily
CLI98_RS06600	SM00490	helicase superfamily c-terminal domain
CLI98_RS06640	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS06645	SM00823	Phosphopantetheine attachment site
CLI98_RS06650	SM00823	Phosphopantetheine attachment site
CLI98_RS06670	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI98_RS06680	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI98_RS06680	SM00245	tail specific protease
CLI98_RS06685	SM00710	Parallel beta-helix repeats
CLI98_RS06685	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
CLI98_RS06695	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS06715	SM00957	SecA DEAD-like domain
CLI98_RS06715	SM00958	SecA preprotein cross-linking domain
CLI98_RS06800	SM00487	DEAD-like helicases superfamily
CLI98_RS06800	SM00490	helicase superfamily c-terminal domain
CLI98_RS06810	SM00421	helix_turn_helix, Lux Regulon
CLI98_RS06810	SM00448	cheY-homologous receiver domain
CLI98_RS06815	SM00387	Histidine kinase-like ATPases
CLI98_RS06855	SM00984	UDP binding domain
CLI98_RS06875	SM00646	CLI98_RS06875
CLI98_RS06905	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS06940	SM00047	Lysozyme subfamily 2
CLI98_RS06940	SM00287	Bacterial SH3 domain homologues
CLI98_RS07000	SM00854	Bacterial capsule synthesis protein PGA_cap
CLI98_RS07035	SM00354	helix_turn _helix lactose operon repressor
CLI98_RS07050	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS07065	SM00287	Bacterial SH3 domain homologues
CLI98_RS07115	SM00903	Flavin reductase like domain
CLI98_RS07130	SM00344	helix_turn_helix ASNC type
CLI98_RS07210	SM00984	UDP binding domain
CLI98_RS07245	SM00487	DEAD-like helicases superfamily
CLI98_RS07245	SM00490	helicase superfamily c-terminal domain
CLI98_RS07255	SM00420	helix_turn_helix, Deoxyribose operon repressor
CLI98_RS07255	SM01134	CLI98_RS07255
CLI98_RS07285	SM00028	Tetratricopeptide repeats
CLI98_RS07310	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS07340	SM00938	Nitrogen regulatory protein P-II
CLI98_RS07350	SM00014	Acid phosphatase homologues
CLI98_RS07380	SM00155	Phospholipase D. Active site motifs.
CLI98_RS07430	SM00028	Tetratricopeptide repeats
CLI98_RS07435	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI98_RS07450	SM00327	von Willebrand factor (vWF) type A domain
CLI98_RS07455	SM00327	von Willebrand factor (vWF) type A domain
CLI98_RS07490	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS07550	SM00226	Low molecular weight phosphatase family
CLI98_RS07590	SM00937	CLI98_RS07590
CLI98_RS07610	SM00919	Malic enzyme, NAD binding domain
CLI98_RS07610	SM01274	CLI98_RS07610
CLI98_RS07625	SM00357	Cold shock protein domain
CLI98_RS07625	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS07625	SM00959	Rho termination factor, N-terminal domain
CLI98_RS07650	SM00448	cheY-homologous receiver domain
CLI98_RS07675	SM00155	Phospholipase D. Active site motifs.
CLI98_RS07690	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS07695	SM00155	Phospholipase D. Active site motifs.
CLI98_RS07720	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CLI98_RS07735	SM00100	Cyclic nucleotide-monophosphate binding domain
CLI98_RS07735	SM00419	helix_turn_helix, cAMP Regulatory protein
CLI98_RS07745	SM00836	DALR anticodon binding domain
CLI98_RS07745	SM01016	Arginyl tRNA synthetase N terminal dom
CLI98_RS07755	SM00028	Tetratricopeptide repeats
CLI98_RS07765	SM00530	Helix-turn-helix XRE-family like proteins 
CLI98_RS07795	SM00421	helix_turn_helix, Lux Regulon
CLI98_RS07835	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS07850	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI98_RS07875	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS07990	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CLI98_RS07995	SM00387	Histidine kinase-like ATPases
CLI98_RS07995	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS08000	SM00448	cheY-homologous receiver domain
CLI98_RS08000	SM00862	Transcriptional regulatory protein, C terminal
CLI98_RS08015	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS08050	SM00858	CLI98_RS08050
CLI98_RS08095	SM00986	Uracil DNA glycosylase superfamily
CLI98_RS08095	SM00987	UreE urease accessory protein, C-terminal domain 
CLI98_RS08130	SM00640	Glycosyl hydrolases family 32
CLI98_RS08140	SM01061	CAT RNA binding domain
CLI98_RS08285	SM00422	helix_turn_helix, mercury resistance
CLI98_RS08295	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CLI98_RS08320	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS08325	SM00363	S4 RNA-binding domain
CLI98_RS08330	SM00954	Region found in RelA / SpoT proteins
CLI98_RS08425	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CLI98_RS08470	SM01060	CLI98_RS08470
CLI98_RS08490	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS08495	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS08520	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS08585	SM01060	CLI98_RS08585
CLI98_RS08600	SM01061	CAT RNA binding domain
CLI98_RS08610	SM00487	DEAD-like helicases superfamily
CLI98_RS08610	SM00490	helicase superfamily c-terminal domain
CLI98_RS08650	SM00656	CLI98_RS08650
CLI98_RS08670	SM00487	DEAD-like helicases superfamily
CLI98_RS08670	SM00490	helicase superfamily c-terminal domain
CLI98_RS08715	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CLI98_RS08725	SM01133	CLI98_RS08725
CLI98_RS08780	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS08785	SM00387	Histidine kinase-like ATPases
CLI98_RS08790	SM00448	cheY-homologous receiver domain
CLI98_RS08790	SM00862	Transcriptional regulatory protein, C terminal
CLI98_RS08795	SM00387	Histidine kinase-like ATPases
CLI98_RS08795	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS08800	SM00448	cheY-homologous receiver domain
CLI98_RS08800	SM00862	Transcriptional regulatory protein, C terminal
CLI98_RS08805	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS08870	SM00420	helix_turn_helix, Deoxyribose operon repressor
CLI98_RS08870	SM01134	CLI98_RS08870
CLI98_RS08885	SM00387	Histidine kinase-like ATPases
CLI98_RS08900	SM00421	helix_turn_helix, Lux Regulon
CLI98_RS08900	SM00448	cheY-homologous receiver domain
CLI98_RS08930	SM00564	beta-propeller repeat
CLI98_RS08940	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CLI98_RS09000	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CLI98_RS09005	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CLI98_RS09085	SM00028	Tetratricopeptide repeats
CLI98_RS09110	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CLI98_RS09115	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS09120	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CLI98_RS09125	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS09145	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI98_RS09145	SM00387	Histidine kinase-like ATPases
CLI98_RS09145	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS09150	SM00448	cheY-homologous receiver domain
CLI98_RS09150	SM00862	Transcriptional regulatory protein, C terminal
CLI98_RS09160	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI98_RS09165	SM00849	Metallo-beta-lactamase superfamily
CLI98_RS09180	SM00091	PAS domain
CLI98_RS09180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI98_RS09180	SM00387	Histidine kinase-like ATPases
CLI98_RS09180	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS09185	SM00448	cheY-homologous receiver domain
CLI98_RS09185	SM00862	Transcriptional regulatory protein, C terminal
CLI98_RS09215	SM00788	Adenylosuccinate synthetase
CLI98_RS09225	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS09285	SM00267	diguanylate cyclase
CLI98_RS09310	SM01131	CLI98_RS09310
CLI98_RS09325	SM00640	Glycosyl hydrolases family 32
CLI98_RS09330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS09330	SM00895	CLI98_RS09330
CLI98_RS09360	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS09370	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS09425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS09435	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI98_RS09465	SM00354	helix_turn _helix lactose operon repressor
CLI98_RS09480	SM00342	helix_turn_helix, arabinose operon control protein
CLI98_RS09505	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CLI98_RS09530	SM00470	ParB-like nuclease domain
CLI98_RS09540	SM00470	ParB-like nuclease domain
CLI98_RS09550	SM01228	CLI98_RS09550
CLI98_RS09560	SM00393	Putative single-stranded nucleic acids-binding domain
CLI98_RS09560	SM01245	CLI98_RS09560
CLI98_RS09580	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS09580	SM00760	Bacterial dnaA protein helix-turn-helix domain
CLI98_RS09585	SM00480	DNA polymerase III beta subunit
CLI98_RS09605	SM00387	Histidine kinase-like ATPases
CLI98_RS09605	SM00433	TopoisomeraseII
CLI98_RS09610	SM00434	DNA Topoisomerase IV
CLI98_RS09645	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI98_RS09645	SM01240	CLI98_RS09645
CLI98_RS09650	SM00936	Penicillin-binding protein 5, C-terminal domain 
CLI98_RS09690	SM00257	Lysin motif
CLI98_RS09690	SM00636	CLI98_RS09690
CLI98_RS09710	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS09720	SM00493	CLI98_RS09720
CLI98_RS09815	SM00465	GIY-YIG type nucleases (URI domain)
CLI98_RS09825	SM00966	SpoVT / AbrB like domain 
CLI98_RS09840	SM01208	CLI98_RS09840
CLI98_RS09845	SM00493	CLI98_RS09845
CLI98_RS09850	SM00650	Ribosomal RNA adenine dimethylases
CLI98_RS09895	SM01400	CLI98_RS09895
CLI98_RS09915	SM00487	DEAD-like helicases superfamily
CLI98_RS09915	SM00490	helicase superfamily c-terminal domain
CLI98_RS09915	SM00982	CLI98_RS09915
CLI98_RS09915	SM01058	CarD-like/TRCF domain
CLI98_RS09920	SM00966	SpoVT / AbrB like domain 
CLI98_RS09935	SM00363	S4 RNA-binding domain
CLI98_RS09955	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI98_RS09970	SM00331	Sigma factor PP2C-like phosphatases
CLI98_RS09970	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CLI98_RS09980	SM00220	Serine/Threonine protein kinases, catalytic domain
CLI98_RS09985	SM00977	TilS substrate C-terminal domain
CLI98_RS09995	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS10040	SM00905	Dihydroneopterin aldolase
CLI98_RS10050	SM00530	Helix-turn-helix XRE-family like proteins 
CLI98_RS10155	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS10155	SM01086	C-terminal, D2-small domain, of ClpB protein
CLI98_RS10160	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS10170	SM00670	Large family of predicted nucleotide-binding domains
CLI98_RS10195	SM00840	CLI98_RS10195
CLI98_RS10200	SM00535	Ribonuclease III family
CLI98_RS10205	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CLI98_RS10230	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CLI98_RS10230	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CLI98_RS10235	SM00649	Ribosomal protein L11/L12
CLI98_RS10265	SM00663	RNA polymerase I subunit A N-terminus
CLI98_RS10285	SM00838	Elongation factor G C-terminus
CLI98_RS10285	SM00889	Elongation factor G, domain IV
CLI98_RS10300	SM01403	CLI98_RS10300
CLI98_RS10320	SM01382	CLI98_RS10320
CLI98_RS10320	SM01383	CLI98_RS10320
CLI98_RS10335	SM00322	K homology RNA-binding domain
CLI98_RS10355	SM01374	CLI98_RS10355
CLI98_RS10360	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CLI98_RS10420	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI98_RS10440	SM00662	RNA polymerases D
CLI98_RS10450	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS10455	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS10495	SM00646	CLI98_RS10495
CLI98_RS10510	SM01251	CLI98_RS10510
CLI98_RS10590	SM00829	Enoylreductase
CLI98_RS10625	SM00342	helix_turn_helix, arabinose operon control protein
CLI98_RS10720	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS10755	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS10775	SM00421	helix_turn_helix, Lux Regulon
CLI98_RS10775	SM00448	cheY-homologous receiver domain
CLI98_RS10780	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS10880	SM00530	Helix-turn-helix XRE-family like proteins 
CLI98_RS10915	SM00450	Rhodanese Homology Domain
CLI98_RS10950	SM00387	Histidine kinase-like ATPases
CLI98_RS10955	SM00448	cheY-homologous receiver domain
CLI98_RS11025	SM00870	CLI98_RS11025
CLI98_RS11065	SM00028	Tetratricopeptide repeats
CLI98_RS11080	SM00642	Alpha-amylase domain
CLI98_RS11090	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS11140	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI98_RS11140	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS11170	SM00632	CLI98_RS11170
CLI98_RS11170	SM00642	Alpha-amylase domain
CLI98_RS11185	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS11300	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CLI98_RS11315	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CLI98_RS11355	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CLI98_RS11370	SM00823	Phosphopantetheine attachment site
CLI98_RS11375	SM00823	Phosphopantetheine attachment site
CLI98_RS11380	SM00823	Phosphopantetheine attachment site
CLI98_RS11405	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS11415	SM00062	Bacterial periplasmic substrate-binding proteins
CLI98_RS11450	SM00710	Parallel beta-helix repeats
CLI98_RS11450	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
CLI98_RS11485	SM00062	Bacterial periplasmic substrate-binding proteins
CLI98_RS11495	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS11510	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS11520	SM00448	cheY-homologous receiver domain
CLI98_RS11520	SM00862	Transcriptional regulatory protein, C terminal
CLI98_RS11525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI98_RS11525	SM00387	Histidine kinase-like ATPases
CLI98_RS11525	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS11530	SM00028	Tetratricopeptide repeats
CLI98_RS11560	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS11590	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CLI98_RS11595	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS11630	SM00420	helix_turn_helix, Deoxyribose operon repressor
CLI98_RS11685	SM00796	Allophanate hydrolase subunit 1
CLI98_RS11690	SM00797	Allophanate hydrolase subunit 2
CLI98_RS11695	SM00346	helix_turn_helix isocitrate lyase regulation
CLI98_RS11765	SM00344	helix_turn_helix ASNC type
CLI98_RS11770	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CLI98_RS11770	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CLI98_RS11770	SM00493	CLI98_RS11770
CLI98_RS11780	SM00267	diguanylate cyclase
CLI98_RS11815	SM00257	Lysin motif
CLI98_RS11830	SM00860	SMI1 / KNR4 family
CLI98_RS11930	SM00091	PAS domain
CLI98_RS11930	SM00387	Histidine kinase-like ATPases
CLI98_RS11935	SM00448	cheY-homologous receiver domain
CLI98_RS11950	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS12000	SM00487	DEAD-like helicases superfamily
CLI98_RS12000	SM00490	helicase superfamily c-terminal domain
CLI98_RS12030	SM01005	Alanine racemase, C-terminal domain
CLI98_RS12055	SM00387	Histidine kinase-like ATPases
CLI98_RS12060	SM00331	Sigma factor PP2C-like phosphatases
CLI98_RS12080	SM00331	Sigma factor PP2C-like phosphatases
CLI98_RS12080	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CLI98_RS12085	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI98_RS12085	SM00732	Likely ribonuclease with RNase H fold.
CLI98_RS12095	SM00731	SprT homologues.
CLI98_RS12210	SM00357	Cold shock protein domain
CLI98_RS12215	SM01058	CarD-like/TRCF domain
CLI98_RS12230	SM00450	Rhodanese Homology Domain
CLI98_RS12235	SM00450	Rhodanese Homology Domain
CLI98_RS12285	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS12285	SM00895	CLI98_RS12285
CLI98_RS12305	SM00342	helix_turn_helix, arabinose operon control protein
CLI98_RS12315	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS12375	SM01130	CLI98_RS12375
CLI98_RS12400	SM00829	Enoylreductase
CLI98_RS12405	SM00422	helix_turn_helix, mercury resistance
CLI98_RS12415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS12445	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS12485	SM01266	CLI98_RS12485
CLI98_RS12495	SM00387	Histidine kinase-like ATPases
CLI98_RS12500	SM00421	helix_turn_helix, Lux Regulon
CLI98_RS12500	SM00448	cheY-homologous receiver domain
CLI98_RS12515	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS12540	SM00825	Beta-ketoacyl synthase
CLI98_RS12545	SM00530	Helix-turn-helix XRE-family like proteins 
CLI98_RS12560	SM00422	helix_turn_helix, mercury resistance
CLI98_RS12580	SM01329	CLI98_RS12580
CLI98_RS12585	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS12585	SM00895	CLI98_RS12585
CLI98_RS12620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS12620	SM00866	CLI98_RS12620
CLI98_RS12625	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS12625	SM00895	CLI98_RS12625
CLI98_RS12665	SM00829	Enoylreductase
CLI98_RS12735	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS12745	SM00881	CoA binding domain
CLI98_RS12770	SM00883	Chaperonin 10 Kd subunit
CLI98_RS12800	SM00028	Tetratricopeptide repeats
CLI98_RS12800	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS12805	SM00829	Enoylreductase
CLI98_RS12860	SM00829	Enoylreductase
CLI98_RS12905	SM00460	Transglutaminase/protease-like homologues
CLI98_RS12915	SM01209	CLI98_RS12915
CLI98_RS12975	SM01001	AIR carboxylase
CLI98_RS12985	SM00998	Adenylosuccinate lyase C-terminus
CLI98_RS13000	SM01211	CLI98_RS13000
CLI98_RS13025	SM00798	AICARFT/IMPCHase bienzyme
CLI98_RS13025	SM00851	MGS-like domain
CLI98_RS13030	SM01209	CLI98_RS13030
CLI98_RS13030	SM01210	CLI98_RS13030
CLI98_RS13075	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CLI98_RS13075	SM00292	breast cancer carboxy-terminal domain
CLI98_RS13075	SM00532	Ligase N family
CLI98_RS13110	SM00845	GatB domain
CLI98_RS13125	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CLI98_RS13285	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS13315	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS13375	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI98_RS13390	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS13395	SM00422	helix_turn_helix, mercury resistance
CLI98_RS13405	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS13410	SM00487	DEAD-like helicases superfamily
CLI98_RS13410	SM00490	helicase superfamily c-terminal domain
CLI98_RS13420	SM00829	Enoylreductase
CLI98_RS13435	SM00656	CLI98_RS13435
CLI98_RS13460	SM00387	Histidine kinase-like ATPases
CLI98_RS13460	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS13460	SM00448	cheY-homologous receiver domain
CLI98_RS13465	SM00448	cheY-homologous receiver domain
CLI98_RS13480	SM00387	Histidine kinase-like ATPases
CLI98_RS13485	SM00448	cheY-homologous receiver domain
CLI98_RS13500	SM00849	Metallo-beta-lactamase superfamily
CLI98_RS13580	SM00642	Alpha-amylase domain
CLI98_RS13585	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS13585	SM00866	CLI98_RS13585
CLI98_RS13615	SM00354	helix_turn _helix lactose operon repressor
CLI98_RS13640	SM00226	Low molecular weight phosphatase family
CLI98_RS13690	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS13700	SM00014	Acid phosphatase homologues
CLI98_RS13705	SM00448	cheY-homologous receiver domain
CLI98_RS13705	SM00862	Transcriptional regulatory protein, C terminal
CLI98_RS13710	SM00387	Histidine kinase-like ATPases
CLI98_RS13710	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS13730	SM00478	endonuclease III
CLI98_RS13770	SM00861	Transketolase, pyrimidine binding domain
CLI98_RS13785	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS13810	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS13815	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS13870	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS13940	SM00287	Bacterial SH3 domain homologues
CLI98_RS13970	SM00478	endonuclease III
CLI98_RS13970	SM00525	CLI98_RS13970
CLI98_RS14000	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS14170	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS14175	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS14180	SM01060	CLI98_RS14180
CLI98_RS14190	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS14195	SM00062	Bacterial periplasmic substrate-binding proteins
CLI98_RS14220	SM00530	Helix-turn-helix XRE-family like proteins 
CLI98_RS14235	SM00567	E-Z type HEAT repeats
CLI98_RS14270	SM00763	PrkA AAA domain
CLI98_RS14285	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS14315	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS14320	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS14325	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS14335	SM00357	Cold shock protein domain
CLI98_RS14350	SM00267	diguanylate cyclase
CLI98_RS14400	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI98_RS14445	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CLI98_RS14445	SM00387	Histidine kinase-like ATPases
CLI98_RS14450	SM00421	helix_turn_helix, Lux Regulon
CLI98_RS14450	SM00448	cheY-homologous receiver domain
CLI98_RS14470	SM00257	Lysin motif
CLI98_RS14495	SM00098	Alkaline phosphatase homologues
CLI98_RS14500	SM00257	Lysin motif
CLI98_RS14545	SM00563	Phosphate acyltransferases
CLI98_RS14550	SM01091	Transporter associated domain
CLI98_RS14555	SM00422	helix_turn_helix, mercury resistance
CLI98_RS14565	SM00825	Beta-ketoacyl synthase
CLI98_RS14570	SM01091	Transporter associated domain
CLI98_RS14630	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS14635	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS14695	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI98_RS14730	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS14750	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI98_RS14795	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS14825	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS14910	SM00849	Metallo-beta-lactamase superfamily
CLI98_RS14955	SM00855	Phosphoglycerate mutase family
CLI98_RS14975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI98_RS14990	SM00914	CLI98_RS14990
CLI98_RS15020	SM00894	Excalibur calcium-binding domain
CLI98_RS15060	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS15180	SM00342	helix_turn_helix, arabinose operon control protein
CLI98_RS15185	SM00354	helix_turn _helix lactose operon repressor
CLI98_RS15220	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI98_RS15230	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI98_RS15230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI98_RS15295	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CLI98_RS15315	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CLI98_RS15320	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CLI98_RS15375	SM00825	Beta-ketoacyl synthase
CLI98_RS15385	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS15390	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS15435	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS15440	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS15500	SM01118	CLI98_RS15500
CLI98_RS15510	SM00954	Region found in RelA / SpoT proteins
CLI98_RS15640	SM00849	Metallo-beta-lactamase superfamily
CLI98_RS15650	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS15655	SM00966	SpoVT / AbrB like domain 
CLI98_RS15785	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS15825	SM00420	helix_turn_helix, Deoxyribose operon repressor
CLI98_RS15825	SM01134	CLI98_RS15825
CLI98_RS15840	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS15875	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CLI98_RS15875	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CLI98_RS15910	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS15945	SM00354	helix_turn _helix lactose operon repressor
CLI98_RS15955	SM00858	CLI98_RS15955
CLI98_RS15970	SM00028	Tetratricopeptide repeats
CLI98_RS15980	SM00257	Lysin motif
CLI98_RS15980	SM00644	CLI98_RS15980
CLI98_RS16000	SM00530	Helix-turn-helix XRE-family like proteins 
CLI98_RS16015	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS16115	SM00257	Lysin motif
CLI98_RS16180	SM00257	Lysin motif
CLI98_RS16180	SM00644	CLI98_RS16180
CLI98_RS16230	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI98_RS16255	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS16270	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CLI98_RS16280	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS16320	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CLI98_RS16335	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS16355	SM00028	Tetratricopeptide repeats
CLI98_RS16395	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS16405	SM00257	Lysin motif
CLI98_RS16405	SM00636	CLI98_RS16405
CLI98_RS16420	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI98_RS16420	SM00924	MgtE intracellular N domain
CLI98_RS16425	SM00422	helix_turn_helix, mercury resistance
CLI98_RS16440	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS16455	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
CLI98_RS16515	SM00091	PAS domain
CLI98_RS16515	SM00387	Histidine kinase-like ATPases
CLI98_RS16515	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS16555	SM01007	Class II Aldolase and Adducin N-terminal domain
CLI98_RS16570	SM00387	Histidine kinase-like ATPases
CLI98_RS16570	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS16575	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS16590	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS16590	SM01086	C-terminal, D2-small domain, of ClpB protein
CLI98_RS16635	SM00822	CLI98_RS16635
CLI98_RS16685	SM00354	helix_turn _helix lactose operon repressor
CLI98_RS16690	SM01061	CAT RNA binding domain
CLI98_RS16720	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI98_RS16720	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI98_RS16750	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CLI98_RS16750	SM00091	PAS domain
CLI98_RS16750	SM00387	Histidine kinase-like ATPases
CLI98_RS16750	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS16770	SM00260	Two component signalling adaptor domain
CLI98_RS16770	SM00448	cheY-homologous receiver domain
CLI98_RS16785	SM00257	Lysin motif
CLI98_RS16805	SM00052	Putative diguanylate phosphodiesterase
CLI98_RS16895	SM00852	Probable molybdopterin binding domain
CLI98_RS16925	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS16935	SM00420	helix_turn_helix, Deoxyribose operon repressor
CLI98_RS16935	SM01134	CLI98_RS16935
CLI98_RS16960	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS16990	SM00966	SpoVT / AbrB like domain 
CLI98_RS16995	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CLI98_RS16995	SM00091	PAS domain
CLI98_RS16995	SM00387	Histidine kinase-like ATPases
CLI98_RS16995	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS17015	SM00849	Metallo-beta-lactamase superfamily
CLI98_RS17055	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CLI98_RS17060	SM00822	CLI98_RS17060
CLI98_RS17060	SM00823	Phosphopantetheine attachment site
CLI98_RS17060	SM00825	Beta-ketoacyl synthase
CLI98_RS17060	SM00826	CLI98_RS17060
CLI98_RS17060	SM01294	CLI98_RS17060
CLI98_RS17065	SM00822	CLI98_RS17065
CLI98_RS17065	SM00823	Phosphopantetheine attachment site
CLI98_RS17065	SM00825	Beta-ketoacyl synthase
CLI98_RS17065	SM00826	CLI98_RS17065
CLI98_RS17070	SM00822	CLI98_RS17070
CLI98_RS17070	SM00823	Phosphopantetheine attachment site
CLI98_RS17070	SM00825	Beta-ketoacyl synthase
CLI98_RS17070	SM01294	CLI98_RS17070
CLI98_RS17075	SM00822	CLI98_RS17075
CLI98_RS17075	SM00823	Phosphopantetheine attachment site
CLI98_RS17075	SM00825	Beta-ketoacyl synthase
CLI98_RS17075	SM01294	CLI98_RS17075
CLI98_RS17080	SM00822	CLI98_RS17080
CLI98_RS17080	SM00823	Phosphopantetheine attachment site
CLI98_RS17080	SM00825	Beta-ketoacyl synthase
CLI98_RS17080	SM01294	CLI98_RS17080
CLI98_RS17085	SM00822	CLI98_RS17085
CLI98_RS17085	SM00823	Phosphopantetheine attachment site
CLI98_RS17085	SM00825	Beta-ketoacyl synthase
CLI98_RS17085	SM01294	CLI98_RS17085
CLI98_RS17090	SM00822	CLI98_RS17090
CLI98_RS17090	SM00823	Phosphopantetheine attachment site
CLI98_RS17090	SM01294	CLI98_RS17090
CLI98_RS17105	SM00861	Transketolase, pyrimidine binding domain
CLI98_RS17205	SM00838	Elongation factor G C-terminus
CLI98_RS17225	SM00670	Large family of predicted nucleotide-binding domains
CLI98_RS17250	SM00878	Biotin carboxylase C-terminal domain
CLI98_RS17295	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI98_RS17400	SM00740	CLI98_RS17400
CLI98_RS17405	SM00740	CLI98_RS17405
CLI98_RS17445	SM00842	Cell division protein FtsA
CLI98_RS17450	SM00864	Tubulin/FtsZ family, GTPase domain
CLI98_RS17450	SM00865	Tubulin/FtsZ family, C-terminal domain
CLI98_RS17475	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS17510	SM00363	S4 RNA-binding domain
CLI98_RS17540	SM00363	S4 RNA-binding domain
CLI98_RS17565	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CLI98_RS17570	SM00851	MGS-like domain
CLI98_RS17570	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CLI98_RS17570	SM01209	CLI98_RS17570
CLI98_RS17585	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CLI98_RS17640	SM00831	Cation transporter/ATPase, N-terminus
CLI98_RS17655	SM00072	Guanylate kinase homologues.
CLI98_RS17660	SM01409	CLI98_RS17660
CLI98_RS17670	SM00487	DEAD-like helicases superfamily
CLI98_RS17670	SM00490	helicase superfamily c-terminal domain
CLI98_RS17695	SM00331	Sigma factor PP2C-like phosphatases
CLI98_RS17695	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CLI98_RS17700	SM00220	Serine/Threonine protein kinases, catalytic domain
CLI98_RS17700	SM00740	CLI98_RS17700
CLI98_RS17715	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
CLI98_RS17735	SM01120	CLI98_RS17735
CLI98_RS17735	SM01121	CLI98_RS17735
CLI98_RS17750	SM00487	DEAD-like helicases superfamily
CLI98_RS17750	SM00490	helicase superfamily c-terminal domain
CLI98_RS17765	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CLI98_RS17770	SM00822	CLI98_RS17770
CLI98_RS17780	SM00358	Double-stranded RNA binding motif
CLI98_RS17780	SM00535	Ribonuclease III family
CLI98_RS17785	SM00968	SMC proteins Flexible Hinge Domain
CLI98_RS17790	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS17790	SM00962	SRP54-type protein, GTPase domain
CLI98_RS17790	SM00963	SRP54-type protein, helical bundle domain
CLI98_RS17805	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS17805	SM00962	SRP54-type protein, GTPase domain
CLI98_RS17805	SM00963	SRP54-type protein, helical bundle domain
CLI98_RS17865	SM00881	CoA binding domain
CLI98_RS17875	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CLI98_RS17875	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CLI98_RS17875	SM00493	CLI98_RS17875
CLI98_RS17895	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS17895	SM01086	C-terminal, D2-small domain, of ClpB protein
CLI98_RS17935	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS17985	SM00448	cheY-homologous receiver domain
CLI98_RS18020	SM00962	SRP54-type protein, GTPase domain
CLI98_RS18030	SM00448	cheY-homologous receiver domain
CLI98_RS18035	SM00073	Histidine Phosphotransfer domain
CLI98_RS18035	SM00260	Two component signalling adaptor domain
CLI98_RS18035	SM00387	Histidine kinase-like ATPases
CLI98_RS18035	SM01231	CLI98_RS18035
CLI98_RS18040	SM00260	Two component signalling adaptor domain
CLI98_RS18100	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI98_RS18110	SM00479	CLI98_RS18110
CLI98_RS18110	SM00481	DNA polymerase alpha chain like domain
CLI98_RS18120	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI98_RS18120	SM00322	K homology RNA-binding domain
CLI98_RS18155	SM00904	Riboflavin kinase
CLI98_RS18160	SM01387	CLI98_RS18160
CLI98_RS18165	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI98_RS18165	SM00322	K homology RNA-binding domain
CLI98_RS18195	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CLI98_RS18205	SM01130	CLI98_RS18205
CLI98_RS18210	SM00849	Metallo-beta-lactamase superfamily
CLI98_RS18225	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS18225	SM00843	CLI98_RS18225
CLI98_RS18230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS18230	SM00866	CLI98_RS18230
CLI98_RS18240	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS18275	SM00530	Helix-turn-helix XRE-family like proteins 
CLI98_RS18285	SM00852	Probable molybdopterin binding domain
CLI98_RS18290	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS18300	SM00322	K homology RNA-binding domain
CLI98_RS18300	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI98_RS18315	SM00829	Enoylreductase
CLI98_RS18325	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI98_RS18340	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CLI98_RS18340	SM00534	ATPase domain of DNA mismatch repair MUTS family
CLI98_RS18345	SM00853	MutL C terminal dimerisation domain
CLI98_RS18345	SM01340	CLI98_RS18345
CLI98_RS18390	SM00849	Metallo-beta-lactamase superfamily
CLI98_RS18395	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CLI98_RS18400	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CLI98_RS18405	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CLI98_RS18430	SM00822	CLI98_RS18430
CLI98_RS18430	SM00823	Phosphopantetheine attachment site
CLI98_RS18430	SM00825	Beta-ketoacyl synthase
CLI98_RS18430	SM00826	CLI98_RS18430
CLI98_RS18430	SM01294	CLI98_RS18430
CLI98_RS18435	SM00822	CLI98_RS18435
CLI98_RS18435	SM00823	Phosphopantetheine attachment site
CLI98_RS18435	SM00825	Beta-ketoacyl synthase
CLI98_RS18435	SM00826	CLI98_RS18435
CLI98_RS18435	SM01294	CLI98_RS18435
CLI98_RS18440	SM00822	CLI98_RS18440
CLI98_RS18440	SM00823	Phosphopantetheine attachment site
CLI98_RS18440	SM00825	Beta-ketoacyl synthase
CLI98_RS18440	SM00826	CLI98_RS18440
CLI98_RS18440	SM01294	CLI98_RS18440
CLI98_RS18445	SM00822	CLI98_RS18445
CLI98_RS18445	SM00823	Phosphopantetheine attachment site
CLI98_RS18445	SM00825	Beta-ketoacyl synthase
CLI98_RS18445	SM00826	CLI98_RS18445
CLI98_RS18445	SM01294	CLI98_RS18445
CLI98_RS18450	SM00823	Phosphopantetheine attachment site
CLI98_RS18450	SM00825	Beta-ketoacyl synthase
CLI98_RS18450	SM01294	CLI98_RS18450
CLI98_RS18555	SM00646	CLI98_RS18555
CLI98_RS18565	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS18580	SM00422	helix_turn_helix, mercury resistance
CLI98_RS18585	SM01230	CLI98_RS18585
CLI98_RS18690	SM00829	Enoylreductase
CLI98_RS18790	SM00710	Parallel beta-helix repeats
CLI98_RS18830	SM00257	Lysin motif
CLI98_RS18835	SM00857	Resolvase, N terminal domain
CLI98_RS18845	SM00861	Transketolase, pyrimidine binding domain
CLI98_RS18870	SM00448	cheY-homologous receiver domain
CLI98_RS18940	SM01207	CLI98_RS18940
CLI98_RS18945	SM00881	CoA binding domain
CLI98_RS18950	SM00387	Histidine kinase-like ATPases
CLI98_RS18950	SM00433	TopoisomeraseII
CLI98_RS18955	SM00434	DNA Topoisomerase IV
CLI98_RS18975	SM00829	Enoylreductase
CLI98_RS18995	SM00354	helix_turn _helix lactose operon repressor
CLI98_RS19035	SM01067	Cellulose binding domain
CLI98_RS19045	SM00387	Histidine kinase-like ATPases
CLI98_RS19045	SM00388	His Kinase A (phosphoacceptor) domain
CLI98_RS19050	SM00448	cheY-homologous receiver domain
CLI98_RS19050	SM00862	Transcriptional regulatory protein, C terminal
CLI98_RS19060	SM00606	Cellulose Binding Domain Type IV
CLI98_RS19065	SM00823	Phosphopantetheine attachment site
CLI98_RS19065	SM00824	Thioesterase
CLI98_RS19070	SM00823	Phosphopantetheine attachment site
CLI98_RS19075	SM00823	Phosphopantetheine attachment site
CLI98_RS19075	SM00825	Beta-ketoacyl synthase
CLI98_RS19080	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CLI98_RS19085	SM00822	CLI98_RS19085
CLI98_RS19090	SM00882	Coenzyme A transferase
CLI98_RS19095	SM00882	Coenzyme A transferase
CLI98_RS19110	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI98_RS19110	SM00876	Biotin and Thiamin Synthesis associated domain
CLI98_RS19170	SM00878	Biotin carboxylase C-terminal domain
CLI98_RS19195	SM00824	Thioesterase
CLI98_RS19200	SM00823	Phosphopantetheine attachment site
CLI98_RS19205	SM00823	Phosphopantetheine attachment site
CLI98_RS19210	SM00823	Phosphopantetheine attachment site
CLI98_RS19210	SM01294	CLI98_RS19210
CLI98_RS19215	SM00823	Phosphopantetheine attachment site
CLI98_RS19265	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CLI98_RS19280	SM00829	Enoylreductase
CLI98_RS19305	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CLI98_RS19320	SM00822	CLI98_RS19320
CLI98_RS19350	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CLI98_RS19365	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI98_RS19375	SM00860	SMI1 / KNR4 family
CLI98_RS19390	SM00342	helix_turn_helix, arabinose operon control protein
CLI98_RS19400	SM00849	Metallo-beta-lactamase superfamily
CLI98_RS19410	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CLI98_RS19445	SM00257	Lysin motif
CLI98_RS19450	SM00341	Helicase and RNase D C-terminal
CLI98_RS19450	SM00487	DEAD-like helicases superfamily
CLI98_RS19450	SM00490	helicase superfamily c-terminal domain
CLI98_RS19450	SM00956	CLI98_RS19450
CLI98_RS19535	SM00849	Metallo-beta-lactamase superfamily
CLI98_RS19545	SM00861	Transketolase, pyrimidine binding domain
CLI98_RS19550	SM00327	von Willebrand factor (vWF) type A domain
CLI98_RS19555	SM00382	ATPases associated with a variety of cellular activities
CLI98_RS19565	SM00257	Lysin motif
CLI98_RS19670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI98_RS19670	SM00866	CLI98_RS19670
CLI98_RS19675	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI98_RS19675	SM00245	tail specific protease
CLI98_RS19710	SM00014	Acid phosphatase homologues
