locus-tag	class	description
JR311_RS00025	COG2080	2 iron, 2 sulfur cluster binding
JR311_RS00040	COG2068	MobA-Related Protein
JR311_RS00045	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
JR311_RS00110	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
JR311_RS00115	COG0667	Aldo Keto reductase
JR311_RS00120	COG0456	acetyltransferase
JR311_RS00125	COG0457	Tetratricopeptide repeat
JR311_RS00130	COG0010	Belongs to the arginase family
JR311_RS00135	COG0833	amino acid
JR311_RS00140	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JR311_RS00145	COG5658	integral membrane protein
JR311_RS00150	COG0640	Transcriptional regulator
JR311_RS00155	COG3829	transcription factor binding
JR311_RS00165	COG0488	(ABC) transporter
JR311_RS00180	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JR311_RS00185	COG5002	protein histidine kinase activity
JR311_RS00195	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JR311_RS00200	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JR311_RS00205	COG4853	Protein conserved in bacteria
JR311_RS00210	COG4863	YycH protein
JR311_RS00215	COG5002	protein histidine kinase activity
JR311_RS00220	COG0745	RESPONSE REGULATOR receiver
JR311_RS00250	COG0346	lactoylglutathione lyase activity
JR311_RS00255	COG0305	Participates in initiation and elongation during chromosome replication
JR311_RS00270	COG3093	addiction module antidote protein HigA
JR311_RS00275	COG0297	glycogen (starch) synthase activity
JR311_RS00285	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
JR311_RS00290	COG0438	transferase activity, transferring glycosyl groups
JR311_RS00310	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
JR311_RS00315	COG4241	membrane
JR311_RS00325	COG5577	PFAM Coat F domain
JR311_RS00330	COG1733	regulation of RNA biosynthetic process
JR311_RS00340	COG0697	spore germination
JR311_RS00345	COG1621	beta-fructofuranosidase activity
JR311_RS00350	COG1621	beta-fructofuranosidase activity
JR311_RS00355	COG1802	Transcriptional regulator
JR311_RS00360	COG2318	DinB family
JR311_RS00365	COG2211	Major facilitator Superfamily
JR311_RS00375	COG0778	Nitroreductase
JR311_RS00380	COG1846	Transcriptional regulator
JR311_RS00385	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JR311_RS00390	COG1846	Transcriptional regulator
JR311_RS00395	COG2153	protein acetylation
JR311_RS00400	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JR311_RS00405	COG0697	spore germination
JR311_RS00410	COG1078	dGTPase activity
JR311_RS00415	COG1846	Transcriptional regulator
JR311_RS00440	COG1331	Highly conserved protein containing a thioredoxin domain
JR311_RS00450	COG0457	Tetratricopeptide repeat
JR311_RS00470	COG0791	NLP P60 protein
JR311_RS00470	COG0741	lytic transglycosylase activity
JR311_RS00475	COG5644	endopeptidase inhibitor activity
JR311_RS00485	COG0433	COG0433 Predicted ATPase
JR311_RS00525	COG2946	Replication initiation factor
JR311_RS00530	COG1674	ftsk spoiiie
JR311_RS00555	COG1396	sequence-specific DNA binding
JR311_RS00560	COG2856	Zn peptidase
JR311_RS00565	COG1331	Highly conserved protein containing a thioredoxin domain
JR311_RS00570	COG4978	Transcriptional regulator
JR311_RS00570	COG0789	Transcriptional regulator
JR311_RS00575	COG1811	Na channel or pump
JR311_RS00580	COG1331	Highly conserved protein containing a thioredoxin domain
JR311_RS00585	COG1331	Highly conserved protein containing a thioredoxin domain
JR311_RS00590	COG1266	CAAX protease self-immunity
JR311_RS00595	COG0477	Major facilitator Superfamily
JR311_RS00595	COG2814	Major facilitator Superfamily
JR311_RS00600	COG0346	lactoylglutathione lyase activity
JR311_RS00605	COG1609	Transcriptional regulator
JR311_RS00610	COG0708	Exodeoxyribonuclease III
JR311_RS00615	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JR311_RS00620	COG2169	Transcriptional regulator
JR311_RS00630	COG0629	single-stranded DNA binding
JR311_RS00640	COG0012	GTP binding
JR311_RS00645	COG0243	molybdopterin cofactor binding
JR311_RS00650	COG4481	Protein conserved in bacteria
JR311_RS00655	COG3949	Membrane
JR311_RS00670	COG1475	DNA binding
JR311_RS00675	COG1192	Involved in chromosome partitioning
JR311_RS00700	COG1847	R3H domain protein
JR311_RS00705	COG0706	membrane insertase activity
JR311_RS00725	COG0592	DNA-directed DNA polymerase activity
JR311_RS00730	COG2501	S4 domain
JR311_RS00745	COG0187	DNA topoisomerase II activity
JR311_RS00750	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JR311_RS00785	COG0516	GMP reductase activity
JR311_RS00785	COG0517	IMP dehydrogenase activity
JR311_RS00790	COG1686	Belongs to the peptidase S11 family
JR311_RS00810	COG1929	Belongs to the glycerate kinase type-1 family
JR311_RS00820	COG1428	Deoxynucleoside kinase
JR311_RS00825	COG1428	Deoxynucleoside kinase
JR311_RS00830	COG1388	LysM domain
JR311_RS00830	COG3858	chitin binding
JR311_RS00835	COG1335	isochorismatase
JR311_RS00840	COG0590	tRNA wobble adenosine to inosine editing
JR311_RS00850	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JR311_RS00855	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JR311_RS00905	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
JR311_RS00910	COG3853	Toxic anion resistance protein (TelA)
JR311_RS00915	COG1982	Orn Lys Arg decarboxylase major
JR311_RS00925	COG3870	Protein conserved in bacteria
JR311_RS00930	COG1728	Protein conserved in bacteria
JR311_RS00935	COG0470	DNA polymerase III
JR311_RS00940	COG1774	PSP1 C-terminal conserved region
JR311_RS00950	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
JR311_RS00960	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JR311_RS00965	COG2002	toxin-antitoxin pair type II binding
JR311_RS00970	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JR311_RS00970	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JR311_RS00975	COG0084	hydrolase, TatD family'
JR311_RS00980	COG3583	domain protein
JR311_RS00980	COG3584	3D domain protein
JR311_RS00985	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JR311_RS00990	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
JR311_RS01000	COG4466	Protein conserved in bacteria
JR311_RS01015	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JR311_RS01020	COG0251	oxidation-reduction process
JR311_RS01035	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JR311_RS01055	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JR311_RS01060	COG2002	toxin-antitoxin pair type II binding
JR311_RS01065	COG2244	polysaccharide biosynthetic process
JR311_RS01070	COG3956	TIGRFAM MazG family protein
JR311_RS01075	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JR311_RS01090	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
JR311_RS01095	COG1098	S1 RNA binding domain
JR311_RS01110	COG2208	phosphoserine phosphatase activity
JR311_RS01115	COG2304	oxidoreductase activity
JR311_RS01120	COG0515	serine threonine protein kinase
JR311_RS01125	COG0037	tRNA processing
JR311_RS01130	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JR311_RS01135	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JR311_RS01150	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JR311_RS01155	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JR311_RS01160	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JR311_RS01165	COG0512	Glutamine amidotransferase of anthranilate synthase
JR311_RS01170	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JR311_RS01175	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JR311_RS01180	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JR311_RS01185	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JR311_RS01190	COG1396	sequence-specific DNA binding
JR311_RS01195	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JR311_RS01200	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
JR311_RS01280	COG4463	regulation of RNA biosynthetic process
JR311_RS01285	COG3880	PFAM UvrB UvrC protein
JR311_RS01295	COG0542	response to heat
JR311_RS01300	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JR311_RS01305	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
JR311_RS01310	COG4956	integral membrane protein (PIN domain superfamily)
JR311_RS01330	COG1045	serine acetyltransferase
JR311_RS01340	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
JR311_RS01345	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JR311_RS01350	COG3688	RNA-binding protein containing a PIN domain
JR311_RS01355	COG1595	DNA-templated transcription, initiation
JR311_RS01365	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JR311_RS01370	COG0250	Participates in transcription elongation, termination and antitermination
JR311_RS01395	COG2813	Specifically methylates the guanine in position
JR311_RS01410	COG1358	cellular component organization or biogenesis
JR311_RS01435	COG0596	Alpha beta hydrolase
JR311_RS01530	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JR311_RS01545	COG0201	protein transport
JR311_RS01555	COG0024	Methionine aminopeptidase
JR311_RS01565	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JR311_RS01590	COG1122	ATPase activity
JR311_RS01595	COG1122	ATPase activity
JR311_RS01600	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JR311_RS01620	COG2226	methyltransferase
JR311_RS01625	COG2318	DinB family
JR311_RS01635	COG0860	N-Acetylmuramoyl-L-alanine amidase
JR311_RS01640	COG0489	protein tyrosine kinase activity
JR311_RS01650	COG2194	sulfuric ester hydrolase activity
JR311_RS01655	COG0726	polysaccharide deacetylase
JR311_RS01690	COG2856	Zn peptidase
JR311_RS01700	COG1395	domain, Protein
JR311_RS01770	COG0305	Participates in initiation and elongation during chromosome replication
JR311_RS01780	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
JR311_RS01865	COG1783	phage Terminase large subunit
JR311_RS01870	COG5518	Phage portal protein
JR311_RS01875	COG2369	cell adhesion
JR311_RS01885	COG0338	D12 class N6 adenine-specific DNA methyltransferase
JR311_RS01890	COG4653	Phage capsid family
JR311_RS01955	COG5280	Phage tail tape measure protein TP901
JR311_RS01955	COG3953	SLT domain
JR311_RS01960	COG1652	LysM domain
JR311_RS01965	COG4193	domain, Protein
JR311_RS01975	COG3628	GPW Gp25 family protein
JR311_RS01980	COG3299	homolog of phage Mu protein gp47
JR311_RS01985	COG3778	Protein conserved in bacteria
JR311_RS02025	COG5632	N-Acetylmuramoyl-L-alanine amidase
JR311_RS02025	COG3409	Peptidoglycan-binding domain 1 protein
JR311_RS02025	COG1388	LysM domain
JR311_RS02035	COG5444	nuclease activity
JR311_RS02060	COG0457	Tetratricopeptide repeat
JR311_RS02070	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JR311_RS02105	COG0738	Major facilitator superfamily
JR311_RS02110	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JR311_RS02125	COG0659	secondary active sulfate transmembrane transporter activity
JR311_RS02130	COG0385	Bile acid
JR311_RS02135	COG2819	hydrolase of the alpha beta superfamily
JR311_RS02140	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JR311_RS02145	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JR311_RS02150	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JR311_RS02155	COG2207	Transcriptional regulator
JR311_RS02155	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JR311_RS02160	COG3876	Protein conserved in bacteria
JR311_RS02165	COG1472	Belongs to the glycosyl hydrolase 3 family
JR311_RS02170	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JR311_RS02175	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JR311_RS02175	COG1263	PTS System
JR311_RS02185	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JR311_RS02190	COG1683	Conserved Protein
JR311_RS02220	COG1595	DNA-templated transcription, initiation
JR311_RS02225	COG5662	AntiSigma factor
JR311_RS02230	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JR311_RS02235	COG4856	YbbR-like protein
JR311_RS02260	COG0515	serine threonine protein kinase
JR311_RS02270	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JR311_RS02280	COG1346	cytolysis
JR311_RS02285	COG1380	Effector of murein hydrolase LrgA
JR311_RS02290	COG1846	Transcriptional regulator
JR311_RS02295	COG1113	amino acid transport
JR311_RS02300	COG1011	Hydrolase
JR311_RS02305	COG4585	Histidine kinase
JR311_RS02310	COG2197	response regulator
JR311_RS02315	COG1131	(ABC) transporter
JR311_RS02335	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
JR311_RS02355	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS02355	COG4221	oxidoreductase activity
JR311_RS02355	COG3321	synthase
JR311_RS02355	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS02360	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS02360	COG0300	oxidoreductase activity
JR311_RS02360	COG0318	PFAM AMP-dependent synthetase and ligase
JR311_RS02360	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS02360	COG3321	synthase
JR311_RS02400	COG0531	amino acid
JR311_RS02415	COG0584	glycerophosphoryl diester phosphodiesterase
JR311_RS02420	COG2271	Major facilitator Superfamily
JR311_RS02430	COG2368	4-hydroxyphenylacetate
JR311_RS02440	COG3409	Peptidoglycan-binding domain 1 protein
JR311_RS02455	COG0371	Dehydrogenase
JR311_RS02465	COG1183	phosphatidylcholine synthase activity
JR311_RS02470	COG0586	Pfam SNARE associated Golgi protein
JR311_RS02475	COG0688	phosphatidylethanolamine metabolic process
JR311_RS02490	COG1301	dicarboxylic acid transport
JR311_RS02495	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JR311_RS02500	COG0833	amino acid
JR311_RS02505	COG2040	homocysteine
JR311_RS02510	COG1115	amino acid carrier protein
JR311_RS02515	COG2066	Belongs to the glutaminase family
JR311_RS02520	COG4191	Histidine kinase
JR311_RS02525	COG0784	Response regulator, receiver
JR311_RS02530	COG3173	Aminoglycoside phosphotransferase
JR311_RS02540	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JR311_RS02545	COG0778	Nitroreductase
JR311_RS02550	COG0346	lactoylglutathione lyase activity
JR311_RS02555	COG2259	Doxx family
JR311_RS02560	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JR311_RS02570	COG3773	Cell wall hydrolase
JR311_RS02575	COG3540	Alkaline phosphatase
JR311_RS02580	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JR311_RS02585	COG0805	protein transport
JR311_RS02595	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JR311_RS02600	COG0477	Major facilitator Superfamily
JR311_RS02605	COG1309	transcriptional regulator
JR311_RS02610	COG0252	asparaginase activity
JR311_RS02615	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
JR311_RS02620	COG3012	SEC-C Motif Domain Protein
JR311_RS02620	COG1405	negative regulation of cell septum assembly
JR311_RS02625	COG0667	Aldo Keto reductase
JR311_RS02635	COG1595	DNA-templated transcription, initiation
JR311_RS02640	COG1595	DNA-templated transcription, initiation
JR311_RS02645	COG1876	peptidase activity
JR311_RS02650	COG0457	Tetratricopeptide repeat
JR311_RS02655	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS02660	COG0366	Alpha amylase catalytic
JR311_RS02665	COG0803	Belongs to the bacterial solute-binding protein 9 family
JR311_RS02670	COG1121	(ABC) transporter
JR311_RS02675	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JR311_RS02680	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JR311_RS02685	COG2310	stress, protein
JR311_RS02690	COG2310	stress, protein
JR311_RS02695	COG2310	stress, protein
JR311_RS02700	COG0861	Integral membrane protein TerC family
JR311_RS02710	COG3853	Toxic anion resistance protein (TelA)
JR311_RS02715	COG0477	Major facilitator Superfamily
JR311_RS02720	COG2814	Major facilitator Superfamily
JR311_RS02725	COG0640	Transcriptional regulator
JR311_RS02730	COG0517	IMP dehydrogenase activity
JR311_RS02730	COG4175	Glycine betaine
JR311_RS02735	COG4176	ABC-type proline glycine betaine transport system permease component
JR311_RS02740	COG2113	Glycine betaine
JR311_RS02745	COG1473	amidohydrolase
JR311_RS02750	COG1288	antiporter activity
JR311_RS02760	COG0366	Alpha amylase catalytic
JR311_RS02770	COG2814	Major facilitator Superfamily
JR311_RS02775	COG1846	Transcriptional regulator
JR311_RS02785	COG1280	lysine exporter protein (LysE YggA)
JR311_RS02790	COG3403	YqcI/YcgG family
JR311_RS02795	COG1113	amino acid transport
JR311_RS02800	COG3665	Urea carboxylase-associated protein
JR311_RS02815	COG1660	Displays ATPase and GTPase activities
JR311_RS02825	COG2271	Major facilitator Superfamily
JR311_RS02830	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JR311_RS02835	COG3458	cephalosporin-C deacetylase activity
JR311_RS02840	COG3541	Predicted nucleotidyltransferase
JR311_RS02845	COG0506	proline dehydrogenase activity
JR311_RS02850	COG1012	belongs to the aldehyde dehydrogenase family
JR311_RS02855	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JR311_RS02860	COG2508	Transcriptional regulator
JR311_RS02870	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JR311_RS02870	COG1587	Uroporphyrinogen-III synthase
JR311_RS02875	COG2146	nitrite reductase [NAD(P)H] activity
JR311_RS02880	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JR311_RS02885	COG0523	cobalamin synthesis protein
JR311_RS02890	COG1063	alcohol dehydrogenase
JR311_RS02895	COG1714	RDD family
JR311_RS02905	COG2723	6-phospho-beta-galactosidase activity
JR311_RS02920	COG3209	COG3209 Rhs family protein
JR311_RS02925	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
JR311_RS02930	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
JR311_RS02935	COG1733	regulation of RNA biosynthetic process
JR311_RS02940	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS02945	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS02950	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS02955	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
JR311_RS02970	COG2364	Membrane
JR311_RS02975	COG1126	abc transporter atp-binding protein
JR311_RS02980	COG0765	amino acid transport
JR311_RS02985	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JR311_RS02990	COG0583	DNA-binding transcription factor activity
JR311_RS02995	COG0163	prenyltransferase activity
JR311_RS03000	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JR311_RS03015	COG3104	oligopeptide transport
JR311_RS03020	COG5434	Belongs to the glycosyl hydrolase 28 family
JR311_RS03030	COG0697	spore germination
JR311_RS03040	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JR311_RS03045	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JR311_RS03050	COG0456	acetyltransferase
JR311_RS03055	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JR311_RS03060	COG0765	amino acid transport
JR311_RS03065	COG1126	abc transporter atp-binding protein
JR311_RS03070	COG1473	amidohydrolase
JR311_RS03075	COG2079	MmgE PrpD family protein
JR311_RS03080	COG1136	(ABC) transporter
JR311_RS03085	COG0577	efflux transmembrane transporter activity
JR311_RS03090	COG0745	RESPONSE REGULATOR receiver
JR311_RS03095	COG3850	Histidine kinase
JR311_RS03095	COG5002	protein histidine kinase activity
JR311_RS03100	COG0457	Tetratricopeptide repeat
JR311_RS03115	COG0527	aspartate kinase activity
JR311_RS03120	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JR311_RS03125	COG4605	iron ion homeostasis
JR311_RS03130	COG4604	ABC transporter, ATP-binding protein
JR311_RS03135	COG4607	ABC-type enterochelin transport system periplasmic component
JR311_RS03140	COG2814	Major facilitator Superfamily
JR311_RS03145	COG1309	transcriptional regulator
JR311_RS03150	COG0778	Nitroreductase
JR311_RS03155	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
JR311_RS03160	COG0640	Transcriptional regulator
JR311_RS03165	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JR311_RS03170	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JR311_RS03175	COG1012	belongs to the aldehyde dehydrogenase family
JR311_RS03180	COG4975	Glucose uptake
JR311_RS03185	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS03190	COG4549	nuclear export factor GLE1
JR311_RS03195	COG2372	response to copper ion
JR311_RS03195	COG1276	copper resistance
JR311_RS03200	COG1349	DNA-binding transcription factor activity
JR311_RS03210	COG2213	PTS system mannitol-specific
JR311_RS03215	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JR311_RS03225	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JR311_RS03235	COG0561	phosphatase activity
JR311_RS03245	COG1914	H( )-stimulated, divalent metal cation uptake system
JR311_RS03255	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
JR311_RS03260	COG1984	allophanate hydrolase subunit 2
JR311_RS03265	COG1414	Transcriptional regulator
JR311_RS03270	COG2755	lipolytic protein G-D-S-L family
JR311_RS03280	COG2329	Antibiotic biosynthesis monooxygenase
JR311_RS03285	COG0768	penicillin binding
JR311_RS03290	COG4989	oxidoreductase activity
JR311_RS03295	COG3711	transcriptional antiterminator
JR311_RS03300	COG0318	PFAM AMP-dependent synthetase and ligase
JR311_RS03305	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS03310	COG1917	Cupin 2, conserved barrel domain protein
JR311_RS03315	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JR311_RS03320	COG3871	stress protein (general stress protein 26)
JR311_RS03330	COG2814	Major facilitator Superfamily
JR311_RS03335	COG1522	sequence-specific DNA binding
JR311_RS03340	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JR311_RS03340	COG0551	DNA topoisomerase type I activity
JR311_RS03345	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
JR311_RS03350	COG3706	GGDEF domain
JR311_RS03355	COG5298	Protein conserved in bacteria
JR311_RS03360	COG1215	transferase activity, transferring glycosyl groups
JR311_RS03370	COG0531	amino acid
JR311_RS03375	COG0494	nUDIX hydrolase
JR311_RS03380	COG0028	Belongs to the TPP enzyme family
JR311_RS03400	COG1914	H( )-stimulated, divalent metal cation uptake system
JR311_RS03410	COG4876	unkown
JR311_RS03425	COG2217	Heavy metal translocating P-type atpase
JR311_RS03430	COG3729	General stress protein
JR311_RS03435	COG0662	Cupin 2, conserved barrel domain protein
JR311_RS03440	COG2329	Antibiotic biosynthesis monooxygenase
JR311_RS03445	COG3546	catalase activity
JR311_RS03450	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JR311_RS03455	COG3290	protein histidine kinase activity
JR311_RS03460	COG4565	transcriptional regulatory protein
JR311_RS03465	COG1301	dicarboxylic acid transport
JR311_RS03470	COG0628	permease
JR311_RS03475	COG1131	(ABC) transporter
JR311_RS03480	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JR311_RS03490	COG1960	acyl-CoA dehydrogenase activity
JR311_RS03505	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JR311_RS03510	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JR311_RS03520	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JR311_RS03525	COG0513	Belongs to the DEAD box helicase family
JR311_RS03530	COG3402	PFAM membrane-flanked domain
JR311_RS03535	COG3428	Bacterial PH domain
JR311_RS03540	COG0705	Rhomboid family
JR311_RS03550	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
JR311_RS03555	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JR311_RS03560	COG0864	Transcriptional regulator
JR311_RS03565	COG2337	Toxic component of a toxin-antitoxin (TA) module
JR311_RS03570	COG1366	Belongs to the anti-sigma-factor antagonist family
JR311_RS03575	COG1366	Belongs to the anti-sigma-factor antagonist family
JR311_RS03580	COG2172	sigma factor antagonist activity
JR311_RS03585	COG2208	phosphoserine phosphatase activity
JR311_RS03590	COG1366	Belongs to the anti-sigma-factor antagonist family
JR311_RS03600	COG1191	sigma factor activity
JR311_RS03605	COG2208	phosphoserine phosphatase activity
JR311_RS03610	COG2183	response to ionizing radiation
JR311_RS03660	COG0457	Tetratricopeptide repeat
JR311_RS03675	COG0477	Major facilitator Superfamily
JR311_RS03685	COG1764	response to oxidative stress
JR311_RS03690	COG1846	Transcriptional regulator
JR311_RS03700	COG1959	2 iron, 2 sulfur cluster binding
JR311_RS03705	COG2910	NAD(P)H-binding
JR311_RS03710	COG1278	Cold shock
JR311_RS03715	COG1329	Transcriptional regulator
JR311_RS03720	COG1794	racemase activity, acting on amino acids and derivatives
JR311_RS03735	COG0456	acetyltransferase
JR311_RS03735	COG1846	Transcriptional regulator
JR311_RS03740	COG2271	Major facilitator Superfamily
JR311_RS03745	COG3621	Patatin-like phospholipase
JR311_RS03755	COG0662	Cupin 2, conserved barrel domain protein
JR311_RS03770	COG0277	FAD linked oxidase domain protein
JR311_RS03790	COG0662	Cupin 2, conserved barrel domain protein
JR311_RS03795	COG2318	DinB family
JR311_RS03800	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JR311_RS03825	COG0351	phosphomethylpyrimidine kinase
JR311_RS03840	COG1064	alcohol dehydrogenase
JR311_RS03845	COG0789	Transcriptional regulator
JR311_RS03855	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JR311_RS03870	COG2814	Major facilitator Superfamily
JR311_RS03875	COG1309	transcriptional regulator
JR311_RS03880	COG5577	PFAM Coat F domain
JR311_RS03890	COG1063	alcohol dehydrogenase
JR311_RS03895	COG5577	PFAM Coat F domain
JR311_RS03905	COG4585	Histidine kinase
JR311_RS03910	COG2197	response regulator
JR311_RS03915	COG2409	Drug exporters of the RND superfamily
JR311_RS03920	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
JR311_RS03925	COG0488	(ABC) transporter
JR311_RS03930	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JR311_RS03935	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JR311_RS03945	COG2814	Major facilitator Superfamily
JR311_RS03950	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JR311_RS03960	COG0730	response to heat
JR311_RS03965	COG0456	acetyltransferase
JR311_RS03970	COG4978	Transcriptional regulator
JR311_RS03970	COG0789	Transcriptional regulator
JR311_RS03975	COG0697	spore germination
JR311_RS03980	COG1051	belongs to the nudix hydrolase family
JR311_RS03985	COG0596	Alpha beta hydrolase
JR311_RS03990	COG0473	3-isopropylmalate dehydrogenase activity
JR311_RS03995	COG1802	Transcriptional regulator
JR311_RS04000	COG1819	glycosyl
JR311_RS04015	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JR311_RS04025	COG1388	LysM domain
JR311_RS04030	COG2814	Major facilitator Superfamily
JR311_RS04035	COG2188	Transcriptional regulator
JR311_RS04040	COG2186	Transcriptional regulator
JR311_RS04045	COG2807	transmembrane transport
JR311_RS04050	COG2076	Multidrug Resistance protein
JR311_RS04055	COG2076	Multidrug Resistance protein
JR311_RS04060	COG1309	transcriptional regulator
JR311_RS04065	COG0531	amino acid
JR311_RS04075	COG3832	glyoxalase III activity
JR311_RS04080	COG0604	alcohol dehydrogenase
JR311_RS04085	COG2814	Major facilitator Superfamily
JR311_RS04125	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
JR311_RS04130	COG0802	atpase or kinase
JR311_RS04135	COG1214	PFAM Peptidase M22, glycoprotease
JR311_RS04140	COG0456	acetyltransferase
JR311_RS04145	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JR311_RS04150	COG0488	(ABC) transporter
JR311_RS04165	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JR311_RS04170	COG0805	protein transport
JR311_RS04180	COG1266	CAAX protease self-immunity
JR311_RS04205	COG0457	Tetratricopeptide repeat
JR311_RS04210	COG1063	alcohol dehydrogenase
JR311_RS04215	COG2211	Major facilitator Superfamily
JR311_RS04220	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JR311_RS04230	COG1842	Phage shock protein A
JR311_RS04235	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JR311_RS04240	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
JR311_RS04245	COG4260	virion core protein, lumpy skin disease virus
JR311_RS04250	COG2755	lipolytic protein G-D-S-L family
JR311_RS04250	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
JR311_RS04260	COG1595	DNA-templated transcription, initiation
JR311_RS04265	COG1063	alcohol dehydrogenase
JR311_RS04270	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JR311_RS04275	COG0823	Involved in the tonB-independent uptake of proteins
JR311_RS04290	COG2132	Multicopper oxidase
JR311_RS04295	COG1113	amino acid transport
JR311_RS04300	COG0714	Associated with various cellular activities
JR311_RS04305	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
JR311_RS04310	COG1305	Transglutaminase-like
JR311_RS04335	COG2252	PERMEase
JR311_RS04340	COG3064	Membrane
JR311_RS04360	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JR311_RS04365	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JR311_RS04370	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JR311_RS04375	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
JR311_RS04380	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JR311_RS04395	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JR311_RS04405	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JR311_RS04410	COG0138	bifunctional purine biosynthesis protein purh
JR311_RS04415	COG0151	Belongs to the GarS family
JR311_RS04425	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
JR311_RS04430	COG1470	cell adhesion involved in biofilm formation
JR311_RS04435	COG4496	protein, YerC YecD
JR311_RS04440	COG0069	glutamate synthase activity
JR311_RS04450	COG0210	DNA helicase
JR311_RS04460	COG4851	CamS sex pheromone cAM373 precursor
JR311_RS04465	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JR311_RS04470	COG1285	pathogenesis
JR311_RS04475	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JR311_RS04495	COG1309	transcriptional regulator
JR311_RS04500	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JR311_RS04505	COG1597	lipid kinase activity
JR311_RS04510	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JR311_RS04520	COG1131	(ABC) transporter
JR311_RS04560	COG5444	nuclease activity
JR311_RS04590	COG3546	catalase activity
JR311_RS04595	COG0454	-acetyltransferase
JR311_RS04605	COG2323	membrane
JR311_RS04610	COG2329	Antibiotic biosynthesis monooxygenase
JR311_RS04615	COG0346	lactoylglutathione lyase activity
JR311_RS04620	COG1366	Belongs to the anti-sigma-factor antagonist family
JR311_RS04625	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
JR311_RS04630	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
JR311_RS04635	COG4208	sulfate ABC transporter
JR311_RS04645	COG5583	Uncharacterized small protein (DUF2292)
JR311_RS04650	COG0196	riboflavin kinase activity
JR311_RS04655	COG0670	Belongs to the BI1 family
JR311_RS04665	COG1846	Transcriptional regulator
JR311_RS04680	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JR311_RS04680	COG2124	cytochrome p450
JR311_RS04685	COG1368	sulfuric ester hydrolase activity
JR311_RS04690	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
JR311_RS04695	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JR311_RS04700	COG1442	glycosyl transferase family 8
JR311_RS04705	COG1216	Glycosyl transferase, family 2
JR311_RS04710	COG1442	glycosyl transferase family 8
JR311_RS04715	COG2223	nitrite transmembrane transporter activity
JR311_RS04720	COG0531	amino acid
JR311_RS04725	COG1012	belongs to the aldehyde dehydrogenase family
JR311_RS04730	COG0840	transmembrane signaling receptor activity
JR311_RS04735	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS04740	COG0457	Tetratricopeptide repeat
JR311_RS04740	COG0463	Glycosyl transferase, family 2
JR311_RS04745	COG0488	(ABC) transporter
JR311_RS04750	COG0789	Transcriptional regulator
JR311_RS04755	COG2814	Major facilitator Superfamily
JR311_RS04760	COG0488	(ABC) transporter
JR311_RS04765	COG0513	Belongs to the DEAD box helicase family
JR311_RS04770	COG0456	acetyltransferase
JR311_RS04775	COG2130	NADP-dependent
JR311_RS04790	COG3866	Pectate lyase
JR311_RS04795	COG0471	metal ion transport
JR311_RS04815	COG3290	protein histidine kinase activity
JR311_RS04820	COG4565	transcriptional regulatory protein
JR311_RS04825	COG3181	Tripartite tricarboxylate transporter family receptor
JR311_RS04830	COG2851	Citrate transporter
JR311_RS04835	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JR311_RS04840	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
JR311_RS04850	COG2258	MOSC domain
JR311_RS04870	COG0024	Methionine aminopeptidase
JR311_RS04875	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JR311_RS04875	COG1263	PTS System
JR311_RS04885	COG1368	sulfuric ester hydrolase activity
JR311_RS04895	COG0071	Belongs to the small heat shock protein (HSP20) family
JR311_RS04910	COG1263	PTS System
JR311_RS04910	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JR311_RS04915	COG0366	Alpha amylase catalytic
JR311_RS04920	COG2188	Transcriptional regulator
JR311_RS04925	COG0778	Nitroreductase
JR311_RS04940	COG0737	Belongs to the 5'-nucleotidase family
JR311_RS04945	COG0693	protein deglycase activity
JR311_RS04950	COG1609	Transcriptional regulator
JR311_RS04965	COG2814	Major facilitator Superfamily
JR311_RS04975	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JR311_RS04980	COG4980	gas vesicle protein
JR311_RS04985	COG1295	ribonuclease BN
JR311_RS04990	COG0477	Major facilitator Superfamily
JR311_RS04995	COG0387	Pfam Sodium calcium exchanger
JR311_RS05005	COG0668	transmembrane transport
JR311_RS05010	COG0535	radical SAM domain protein
JR311_RS05020	COG0726	polysaccharide deacetylase
JR311_RS05025	COG2084	Dehydrogenase
JR311_RS05035	COG0598	Magnesium transport protein CorA
JR311_RS05040	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
JR311_RS05045	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JR311_RS05055	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JR311_RS05060	COG4637	Psort location Cytoplasmic, score
JR311_RS05065	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JR311_RS05070	COG0022	dehydrogenase e1 component
JR311_RS05075	COG0508	dehydrogenase complex catalyzes the overall conversion of
JR311_RS05080	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JR311_RS05085	COG3284	Transcriptional regulator
JR311_RS05095	COG1486	melibiose metabolic process
JR311_RS05100	COG1737	Transcriptional regulator
JR311_RS05105	COG1263	PTS System
JR311_RS05105	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JR311_RS05110	COG5434	Belongs to the glycosyl hydrolase 28 family
JR311_RS05115	COG1132	(ABC) transporter
JR311_RS05120	COG1132	(ABC) transporter
JR311_RS05125	COG2259	Doxx family
JR311_RS05130	COG2514	catechol 2,3-dioxygenase activity
JR311_RS05140	COG1695	Transcriptional regulator
JR311_RS05145	COG2249	NAD(P)H dehydrogenase (quinone) activity
JR311_RS05150	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
JR311_RS05155	COG3848	Pyruvate phosphate dikinase
JR311_RS05155	COG0574	Belongs to the PEP-utilizing enzyme family
JR311_RS05160	COG2732	(Barnase) inhibitor
JR311_RS05165	COG2318	DinB family
JR311_RS05170	COG2814	Major facilitator Superfamily
JR311_RS05175	COG1846	Transcriptional regulator
JR311_RS05180	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JR311_RS05180	COG0392	lysyltransferase activity
JR311_RS05185	COG0384	phenazine biosynthesis protein PhzF
JR311_RS05190	COG0778	Nitroreductase
JR311_RS05205	COG1090	epimerase
JR311_RS05220	COG2814	Major facilitator Superfamily
JR311_RS05230	COG3591	Belongs to the peptidase S1B family
JR311_RS05245	COG3103	Sh3 type 3 domain protein
JR311_RS05250	COG5658	integral membrane protein
JR311_RS05255	COG0596	Alpha beta hydrolase
JR311_RS05260	COG0463	Glycosyl transferase, family 2
JR311_RS05265	COG4485	Bacterial membrane protein, YfhO
JR311_RS05270	COG1988	membrane-bound metal-dependent
JR311_RS05275	COG1194	a g-specific adenine glycosylase
JR311_RS05285	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS05305	COG1132	(ABC) transporter
JR311_RS05310	COG4129	membrane
JR311_RS05320	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JR311_RS05325	COG0735	belongs to the Fur family
JR311_RS05440	COG3340	Belongs to the peptidase S51 family
JR311_RS05450	COG0277	FAD linked oxidase domain protein
JR311_RS05460	COG0747	negative chemotaxis
JR311_RS05465	COG0601	transmembrane transport
JR311_RS05470	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JR311_RS05475	COG0444	Belongs to the ABC transporter superfamily
JR311_RS05480	COG4608	Belongs to the ABC transporter superfamily
JR311_RS05485	COG0753	catalase activity
JR311_RS05495	COG1116	anion transmembrane transporter activity
JR311_RS05500	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JR311_RS05505	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JR311_RS05525	COG1476	TRANSCRIPTIONal
JR311_RS05535	COG3382	B3 4 domain protein
JR311_RS05540	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JR311_RS05550	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JR311_RS05555	COG0789	Transcriptional regulator
JR311_RS05560	COG1664	Polymer-forming cytoskeletal
JR311_RS05565	COG1664	Polymer-forming cytoskeletal
JR311_RS05570	COG2766	serine protein kinase
JR311_RS05580	COG1846	Transcriptional regulator
JR311_RS05585	COG1566	PFAM secretion protein HlyD family protein
JR311_RS05590	COG2814	Major facilitator Superfamily
JR311_RS05595	COG0655	NAD(P)H dehydrogenase (quinone) activity
JR311_RS05610	COG1725	Transcriptional regulator
JR311_RS05615	COG1131	(ABC) transporter
JR311_RS05620	COG1131	(ABC) transporter
JR311_RS05625	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JR311_RS05630	COG1278	Cold shock
JR311_RS05635	COG1464	Belongs to the NlpA lipoprotein family
JR311_RS05640	COG3706	GGDEF domain
JR311_RS05645	COG1823	symporter activity
JR311_RS05665	COG5577	PFAM Coat F domain
JR311_RS05670	COG0737	Belongs to the 5'-nucleotidase family
JR311_RS05670	COG1525	nuclease
JR311_RS05670	COG4085	toxin activity
JR311_RS05675	COG3764	Sortase (surface protein transpeptidase)
JR311_RS05680	COG0564	pseudouridine synthase activity
JR311_RS05690	COG0517	IMP dehydrogenase activity
JR311_RS05695	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JR311_RS05700	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JR311_RS05700	COG3153	acetyltransferase
JR311_RS05705	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JR311_RS05710	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
JR311_RS05715	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JR311_RS05725	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JR311_RS05730	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JR311_RS05735	COG4585	Histidine kinase
JR311_RS05735	COG2203	Gaf domain
JR311_RS05740	COG2197	response regulator
JR311_RS05745	COG0431	NADPH-dependent FMN reductase
JR311_RS05760	COG0791	NLP P60 protein
JR311_RS05760	COG1388	LysM domain
JR311_RS05765	COG1959	2 iron, 2 sulfur cluster binding
JR311_RS05770	COG0668	transmembrane transport
JR311_RS05775	COG2719	SpoVR family
JR311_RS05780	COG1785	Belongs to the alkaline phosphatase family
JR311_RS05785	COG0791	NLP P60 protein
JR311_RS05785	COG1388	LysM domain
JR311_RS05790	COG0583	DNA-binding transcription factor activity
JR311_RS05795	COG0372	Belongs to the citrate synthase family
JR311_RS05800	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS05805	COG0531	amino acid
JR311_RS05810	COG0733	neurotransmitter:sodium symporter activity
JR311_RS05825	COG1595	DNA-templated transcription, initiation
JR311_RS05830	COG0204	Acyl-transferase
JR311_RS05835	COG1253	flavin adenine dinucleotide binding
JR311_RS05840	COG0789	Transcriptional regulator
JR311_RS05845	COG0436	Aminotransferase
JR311_RS05850	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JR311_RS05855	COG1253	flavin adenine dinucleotide binding
JR311_RS05860	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JR311_RS05865	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JR311_RS05870	COG0584	glycerophosphoryl diester phosphodiesterase
JR311_RS05880	COG0668	transmembrane transport
JR311_RS05885	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JR311_RS05890	COG0726	polysaccharide deacetylase
JR311_RS05895	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JR311_RS05900	COG3226	Transcriptional regulator
JR311_RS05910	COG0589	response to stress
JR311_RS05915	COG1132	(ABC) transporter
JR311_RS05920	COG1132	(ABC) transporter
JR311_RS05925	COG0702	epimerase
JR311_RS05940	COG0189	ligase activity
JR311_RS05945	COG0189	ligase activity
JR311_RS05960	COG4335	DNA alkylation repair
JR311_RS05965	COG0561	phosphatase activity
JR311_RS05970	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JR311_RS05980	COG0475	glutathione-regulated potassium exporter activity
JR311_RS05985	COG0490	domain, Protein
JR311_RS05995	COG1024	Enoyl-CoA hydratase
JR311_RS06005	COG4152	abc transporter atp-binding protein
JR311_RS06010	COG1668	transmembrane transport
JR311_RS06015	COG0420	3'-5' exonuclease activity
JR311_RS06020	COG4717	serine-type aminopeptidase activity
JR311_RS06035	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JR311_RS06070	COG4980	gas vesicle protein
JR311_RS06085	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
JR311_RS06090	COG0537	adenosine 5'-monophosphoramidase activity
JR311_RS06095	COG1131	(ABC) transporter
JR311_RS06100	COG4473	ABC transporter
JR311_RS06110	COG1473	amidohydrolase
JR311_RS06115	COG3069	C4-dicarboxylate transmembrane transporter activity
JR311_RS06120	COG2329	Antibiotic biosynthesis monooxygenase
JR311_RS06125	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JR311_RS06135	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
JR311_RS06140	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
JR311_RS06145	COG1309	transcriptional regulator
JR311_RS06150	COG1511	domain protein
JR311_RS06155	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JR311_RS06165	COG1363	Peptidase, m42
JR311_RS06170	COG1301	dicarboxylic acid transport
JR311_RS06180	COG1234	tRNA 3'-trailer cleavage
JR311_RS06185	COG0095	Lipoate-protein ligase
JR311_RS06190	COG0702	epimerase
JR311_RS06195	COG0318	PFAM AMP-dependent synthetase and ligase
JR311_RS06205	COG0501	Belongs to the peptidase M48B family
JR311_RS06210	COG1404	Belongs to the peptidase S8 family
JR311_RS06215	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
JR311_RS06220	COG0406	alpha-ribazole phosphatase activity
JR311_RS06225	COG0183	Belongs to the thiolase family
JR311_RS06230	COG0318	PFAM AMP-dependent synthetase and ligase
JR311_RS06235	COG1268	BioY protein
JR311_RS06240	COG0840	transmembrane signaling receptor activity
JR311_RS06245	COG0723	plastoquinol--plastocyanin reductase activity
JR311_RS06245	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JR311_RS06250	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS06260	COG4903	ComK protein
JR311_RS06270	COG5646	InterPro IPR014922
JR311_RS06290	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JR311_RS06305	COG0398	Pfam SNARE associated Golgi protein
JR311_RS06310	COG0681	Belongs to the peptidase S26 family
JR311_RS06315	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JR311_RS06320	COG1846	Transcriptional regulator
JR311_RS06325	COG3180	Ammonia monooxygenase
JR311_RS06330	COG2814	Major facilitator Superfamily
JR311_RS06340	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
JR311_RS06345	COG2323	membrane
JR311_RS06360	COG0420	3'-5' exonuclease activity
JR311_RS06365	COG0419	ATPase involved in DNA repair
JR311_RS06370	COG1403	HNH endonuclease
JR311_RS06410	COG0179	Fumarylacetoacetate (FAA) hydrolase
JR311_RS06430	COG0367	asparagine synthase
JR311_RS06435	COG1562	ergosterol biosynthetic process
JR311_RS06440	COG0534	Mate efflux family protein
JR311_RS06445	COG2207	Transcriptional regulator
JR311_RS06445	COG1917	Cupin 2, conserved barrel domain protein
JR311_RS06450	COG1609	Transcriptional regulator
JR311_RS06455	COG0673	inositol 2-dehydrogenase activity
JR311_RS06460	COG2318	DinB family
JR311_RS06465	COG1357	PFAM Pentapeptide repeats (8 copies)
JR311_RS06470	COG2153	protein acetylation
JR311_RS06475	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
JR311_RS06475	COG0646	methionine synthase
JR311_RS06485	COG2996	Protein conserved in bacteria
JR311_RS06490	COG1744	ABC transporter substrate-binding protein PnrA-like
JR311_RS06495	COG0840	transmembrane signaling receptor activity
JR311_RS06505	COG1307	EDD domain protein, DegV family
JR311_RS06510	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JR311_RS06530	COG0561	phosphatase activity
JR311_RS06535	COG1073	alpha beta
JR311_RS06540	COG2151	metal-sulfur cluster biosynthetic enzyme
JR311_RS06550	COG0277	FAD linked oxidase domain protein
JR311_RS06555	COG2271	Major facilitator Superfamily
JR311_RS06565	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
JR311_RS06575	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JR311_RS06580	COG0505	Belongs to the CarA family
JR311_RS06585	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
JR311_RS06590	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JR311_RS06605	COG2267	carboxylic ester hydrolase activity
JR311_RS06615	COG1744	ABC transporter substrate-binding protein PnrA-like
JR311_RS06630	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JR311_RS06635	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JR311_RS06640	COG5504	Zn-dependent protease
JR311_RS06645	COG0444	Belongs to the ABC transporter superfamily
JR311_RS06650	COG4608	Belongs to the ABC transporter superfamily
JR311_RS06660	COG0601	transmembrane transport
JR311_RS06665	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JR311_RS06675	COG0180	Tryptophanyl-tRNA synthetase
JR311_RS06680	COG4166	transmembrane transport
JR311_RS06685	COG0601	transmembrane transport
JR311_RS06690	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JR311_RS06695	COG0444	Belongs to the ABC transporter superfamily
JR311_RS06700	COG4608	Belongs to the ABC transporter superfamily
JR311_RS06710	COG0456	acetyltransferase
JR311_RS06715	COG1393	Belongs to the ArsC family
JR311_RS06720	COG0861	Integral membrane protein TerC family
JR311_RS06730	COG4862	establishment of competence for transformation
JR311_RS06735	COG4469	Competence protein
JR311_RS06740	COG1164	Oligoendopeptidase f
JR311_RS06750	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
JR311_RS06755	COG2346	COG2346, Truncated hemoglobins
JR311_RS06760	COG0741	lytic transglycosylase activity
JR311_RS06765	COG4116	CYTH
JR311_RS06775	COG2357	RelA SpoT domain protein
JR311_RS06780	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JR311_RS06785	COG0564	pseudouridine synthase activity
JR311_RS06795	COG0475	glutathione-regulated potassium exporter activity
JR311_RS06795	COG0569	domain protein
JR311_RS06800	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
JR311_RS06805	COG0352	thiamine-phosphate diphosphorylase activity
JR311_RS06810	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JR311_RS06815	COG2104	thiamine diphosphate biosynthetic process
JR311_RS06825	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JR311_RS06830	COG0351	phosphomethylpyrimidine kinase
JR311_RS06835	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JR311_RS06890	COG0210	DNA helicase
JR311_RS06910	COG1131	(ABC) transporter
JR311_RS06920	COG2153	protein acetylation
JR311_RS06930	COG2382	esterase
JR311_RS06935	COG0626	cystathionine gamma-synthase activity
JR311_RS06940	COG0626	cystathionine gamma-synthase activity
JR311_RS07005	COG5444	nuclease activity
JR311_RS07015	COG2367	Beta-lactamase
JR311_RS07020	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
JR311_RS07030	COG1846	Transcriptional regulator
JR311_RS07040	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
JR311_RS07045	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JR311_RS07050	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JR311_RS07055	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JR311_RS07055	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JR311_RS07060	COG1447	Phosphotransferase system cellobiose-specific component IIA
JR311_RS07070	COG1349	DNA-binding transcription factor activity
JR311_RS07090	COG1285	pathogenesis
JR311_RS07100	COG2205	protein histidine kinase activity
JR311_RS07110	COG3383	formate dehydrogenase (NAD+) activity
JR311_RS07115	COG2427	Protein of unknown function (DUF1641)
JR311_RS07120	COG2124	cytochrome p450
JR311_RS07125	COG1819	glycosyl
JR311_RS07135	COG1587	Uroporphyrinogen-III synthase
JR311_RS07140	COG0390	transport system, permease component
JR311_RS07145	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JR311_RS07150	COG0697	spore germination
JR311_RS07155	COG4297	protein containing double-stranded beta helix domain
JR311_RS07165	COG1252	NADH dehydrogenase
JR311_RS07175	COG2211	Major facilitator Superfamily
JR311_RS07180	COG1609	Transcriptional regulator
JR311_RS07185	COG0246	Mannitol dehydrogenase
JR311_RS07190	COG2721	sulfolactate sulfo-lyase activity
JR311_RS07195	COG0730	response to heat
JR311_RS07200	COG2318	DinB family
JR311_RS07205	COG0457	Tetratricopeptide repeat
JR311_RS07215	COG1388	LysM domain
JR311_RS07215	COG3409	Peptidoglycan-binding domain 1 protein
JR311_RS07215	COG5632	N-Acetylmuramoyl-L-alanine amidase
JR311_RS07225	COG4195	phage-related replication protein
JR311_RS07230	COG2856	Zn peptidase
JR311_RS07235	COG1396	sequence-specific DNA binding
JR311_RS07245	COG1522	sequence-specific DNA binding
JR311_RS07250	COG1484	DNA-dependent DNA replication
JR311_RS07270	COG1595	DNA-templated transcription, initiation
JR311_RS07275	COG5484	DNA packaging
JR311_RS07275	COG3728	DNA packaging
JR311_RS07280	COG1783	phage Terminase large subunit
JR311_RS07285	COG5518	Phage portal protein
JR311_RS07290	COG0338	D12 class N6 adenine-specific DNA methyltransferase
JR311_RS07295	COG4653	Phage capsid family
JR311_RS07345	COG3953	SLT domain
JR311_RS07345	COG3953	SLT domain
JR311_RS07345	COG5412	phage tail tape measure protein
JR311_RS07345	COG5412	phage tail tape measure protein
JR311_RS07345	COG5412	phage tail tape measure protein
JR311_RS07345	COG3953	SLT domain
JR311_RS07350	COG1652	LysM domain
JR311_RS07355	COG4193	domain, Protein
JR311_RS07365	COG3628	GPW Gp25 family protein
JR311_RS07370	COG3299	homolog of phage Mu protein gp47
JR311_RS07375	COG3778	Protein conserved in bacteria
JR311_RS07415	COG3409	Peptidoglycan-binding domain 1 protein
JR311_RS07415	COG5632	N-Acetylmuramoyl-L-alanine amidase
JR311_RS07430	COG0306	phosphate transporter
JR311_RS07435	COG1392	Phosphate transport regulator
JR311_RS07440	COG0531	amino acid
JR311_RS07445	COG0346	lactoylglutathione lyase activity
JR311_RS07450	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
JR311_RS07455	COG0463	Glycosyl transferase, family 2
JR311_RS07465	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JR311_RS07470	COG0477	Major facilitator Superfamily
JR311_RS07475	COG2362	D-Aminopeptidase
JR311_RS07480	COG0601	transmembrane transport
JR311_RS07485	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JR311_RS07490	COG0444	Belongs to the ABC transporter superfamily
JR311_RS07495	COG4166	transmembrane transport
JR311_RS07500	COG1619	proteins homologs of microcin C7 resistance protein MccF
JR311_RS07505	COG4948	Mandelate Racemase Muconate Lactonizing
JR311_RS07510	COG0791	NLP P60 protein
JR311_RS07515	COG4608	Belongs to the ABC transporter superfamily
JR311_RS07520	COG2706	6-phosphogluconolactonase activity
JR311_RS07525	COG1834	amidinotransferase
JR311_RS07530	COG1607	acyl-coa hydrolase
JR311_RS07535	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JR311_RS07540	COG2076	Multidrug Resistance protein
JR311_RS07545	COG2076	Multidrug Resistance protein
JR311_RS07550	COG0788	formyltetrahydrofolate deformylase activity
JR311_RS07555	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JR311_RS07565	COG1764	response to oxidative stress
JR311_RS07570	COG1846	Transcriptional regulator
JR311_RS07575	COG1764	response to oxidative stress
JR311_RS07590	COG0457	Tetratricopeptide repeat
JR311_RS07590	COG0463	Glycosyl transferase, family 2
JR311_RS07600	COG2814	Major facilitator Superfamily
JR311_RS07605	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JR311_RS07615	COG1404	Belongs to the peptidase S8 family
JR311_RS07620	COG1366	Belongs to the anti-sigma-factor antagonist family
JR311_RS07625	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JR311_RS07630	COG1122	ATPase activity
JR311_RS07635	COG4721	ABC-type cobalt transport system, permease component
JR311_RS07640	COG1388	LysM domain
JR311_RS07640	COG3858	chitin binding
JR311_RS07650	COG2239	Acts as a magnesium transporter
JR311_RS07655	COG0789	Transcriptional regulator
JR311_RS07670	COG1846	Transcriptional regulator
JR311_RS07675	COG0726	polysaccharide deacetylase
JR311_RS07680	COG3285	dna ligase
JR311_RS07680	COG1793	dna ligase
JR311_RS07685	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
JR311_RS07690	COG0586	Pfam SNARE associated Golgi protein
JR311_RS07695	COG0861	Integral membrane protein TerC family
JR311_RS07700	COG1191	sigma factor activity
JR311_RS07725	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JR311_RS07730	COG2323	membrane
JR311_RS07740	COG3594	Acyltransferase
JR311_RS07745	COG5002	protein histidine kinase activity
JR311_RS07750	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JR311_RS07765	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JR311_RS07770	COG0436	Aminotransferase
JR311_RS07800	COG3852	Histidine kinase
JR311_RS07805	COG1846	Transcriptional regulator
JR311_RS07810	COG1360	Flagellar Motor Protein
JR311_RS07815	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JR311_RS07820	COG0542	response to heat
JR311_RS07825	COG3949	Membrane
JR311_RS07840	COG0720	synthase
JR311_RS07845	COG0602	queuosine metabolic process
JR311_RS07870	COG4873	Protein conserved in bacteria
JR311_RS07880	COG3773	Cell wall hydrolase
JR311_RS07885	COG2244	polysaccharide biosynthetic process
JR311_RS07890	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JR311_RS07895	COG2217	Heavy metal translocating P-type atpase
JR311_RS07900	COG0006	proline dipeptidase activity
JR311_RS07905	COG1609	Transcriptional regulator
JR311_RS07910	COG3711	transcriptional antiterminator
JR311_RS07915	COG1263	PTS System
JR311_RS07915	COG2190	(PTS) system
JR311_RS07915	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JR311_RS07920	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JR311_RS07925	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JR311_RS07935	COG1533	DNA photolyase activity
JR311_RS07940	COG0840	transmembrane signaling receptor activity
JR311_RS07945	COG2084	Dehydrogenase
JR311_RS07950	COG2340	Cysteine-rich secretory protein family
JR311_RS07955	COG0768	penicillin binding
JR311_RS07960	COG4191	Histidine kinase
JR311_RS07965	COG0436	Aminotransferase
JR311_RS07975	COG0784	Response regulator, receiver
JR311_RS07975	COG0835	chemotaxis
JR311_RS07985	COG2814	Major facilitator Superfamily
JR311_RS07990	COG1376	ErfK ybiS ycfS ynhG family protein
JR311_RS07995	COG1408	metallophosphoesterase
JR311_RS08000	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS08010	COG2200	EAL domain
JR311_RS08015	COG4703	Protein of unknown function (DUF1797)
JR311_RS08020	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
JR311_RS08030	COG0517	IMP dehydrogenase activity
JR311_RS08035	COG0583	DNA-binding transcription factor activity
JR311_RS08040	COG0716	FMN binding
JR311_RS08050	COG0716	FMN binding
JR311_RS08070	COG0668	transmembrane transport
JR311_RS08075	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JR311_RS08095	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JR311_RS08100	COG0303	'Molybdopterin
JR311_RS08105	COG1763	Mo-molybdopterin cofactor biosynthetic process
JR311_RS08110	COG0314	molybdopterin synthase activity
JR311_RS08115	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
JR311_RS08125	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JR311_RS08130	COG1136	(ABC) transporter
JR311_RS08135	COG0577	efflux transmembrane transporter activity
JR311_RS08140	COG1349	DNA-binding transcription factor activity
JR311_RS08145	COG1105	Belongs to the carbohydrate kinase PfkB family
JR311_RS08150	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JR311_RS08150	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JR311_RS08150	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JR311_RS08155	COG0681	Belongs to the peptidase S26 family
JR311_RS08165	COG0488	(ABC) transporter
JR311_RS08170	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JR311_RS08175	COG2309	aminopeptidase activity
JR311_RS08185	COG1077	Cell shape determining protein MreB Mrl
JR311_RS08190	COG2002	toxin-antitoxin pair type II binding
JR311_RS08195	COG3852	Histidine kinase
JR311_RS08200	COG2105	PFAM AIG2 family protein
JR311_RS08200	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
JR311_RS08205	COG0569	domain protein
JR311_RS08215	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JR311_RS08225	COG0561	phosphatase activity
JR311_RS08230	COG0242	peptide deformylase activity
JR311_RS08240	COG0497	DNA recombination
JR311_RS08250	COG3321	synthase
JR311_RS08250	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS08250	COG4221	oxidoreductase activity
JR311_RS08250	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS08255	COG0300	oxidoreductase activity
JR311_RS08255	COG4221	oxidoreductase activity
JR311_RS08255	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JR311_RS08255	COG3321	synthase
JR311_RS08260	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS08260	COG4221	oxidoreductase activity
JR311_RS08260	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS08260	COG3321	synthase
JR311_RS08265	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JR311_RS08265	COG4221	oxidoreductase activity
JR311_RS08265	COG3321	synthase
JR311_RS08265	COG0300	oxidoreductase activity
JR311_RS08270	COG4221	oxidoreductase activity
JR311_RS08270	COG3321	synthase
JR311_RS08270	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JR311_RS08270	COG0300	oxidoreductase activity
JR311_RS08275	COG3321	synthase
JR311_RS08275	COG4221	oxidoreductase activity
JR311_RS08275	COG0300	oxidoreductase activity
JR311_RS08275	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JR311_RS08280	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS08280	COG3321	synthase
JR311_RS08280	COG4221	oxidoreductase activity
JR311_RS08280	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS08285	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JR311_RS08290	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JR311_RS08295	COG0022	dehydrogenase e1 component
JR311_RS08300	COG0508	dehydrogenase complex catalyzes the overall conversion of
JR311_RS08305	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JR311_RS08310	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JR311_RS08325	COG1982	Orn Lys Arg decarboxylase major
JR311_RS08345	COG0483	inositol monophosphate 1-phosphatase activity
JR311_RS08355	COG3227	Zinc metalloprotease (Elastase)
JR311_RS08380	COG1217	gtp-binding protein TYPA
JR311_RS08390	COG4896	Protein conserved in bacteria
JR311_RS08400	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
JR311_RS08405	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JR311_RS08410	COG2066	Belongs to the glutaminase family
JR311_RS08420	COG0772	Belongs to the SEDS family
JR311_RS08425	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
JR311_RS08440	COG2010	Cytochrome c
JR311_RS08440	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JR311_RS08445	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JR311_RS08450	COG1845	cytochrome c oxidase, subunit III
JR311_RS08455	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
JR311_RS08460	COG3336	cytochrome c oxidase
JR311_RS08470	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
JR311_RS08475	COG2340	Cysteine-rich secretory protein family
JR311_RS08490	COG3679	Belongs to the UPF0342 family
JR311_RS08505	COG0742	ribosomal rna small subunit methyltransferase
JR311_RS08515	COG3314	Sporulation integral membrane protein YlbJ
JR311_RS08520	COG1752	Esterase of the alpha-beta hydrolase superfamily
JR311_RS08525	COG3480	Lon protease (S16) C-terminal proteolytic domain
JR311_RS08535	COG1399	metal-binding, possibly nucleic acid-binding protein
JR311_RS08555	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JR311_RS08575	COG4839	cell division protein FtsL
JR311_RS08580	COG0768	penicillin binding
JR311_RS08585	COG0768	penicillin binding
JR311_RS08605	COG0772	Belongs to the SEDS family
JR311_RS08620	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
JR311_RS08625	COG0849	cell division
JR311_RS08630	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JR311_RS08635	COG1404	Belongs to the peptidase S8 family
JR311_RS08635	COG4412	M6 family metalloprotease domain protein
JR311_RS08645	COG1191	sigma factor activity
JR311_RS08650	COG1191	sigma factor activity
JR311_RS08655	COG1119	ATPase activity
JR311_RS08660	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JR311_RS08665	COG1873	PFAM PRC-barrel domain
JR311_RS08670	COG1496	oxidoreductase activity
JR311_RS08675	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JR311_RS08685	COG0762	integral membrane protein
JR311_RS08690	COG2302	S4 RNA-binding domain
JR311_RS08695	COG3599	regulation of cell shape
JR311_RS08700	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JR311_RS08705	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JR311_RS08715	COG0564	pseudouridine synthase activity
JR311_RS08725	COG2233	PERMEase
JR311_RS08735	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JR311_RS08740	COG0505	Belongs to the CarA family
JR311_RS08745	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
JR311_RS08760	COG0284	orotidine-5'-phosphate decarboxylase activity
JR311_RS08765	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JR311_RS08775	COG0306	phosphate transporter
JR311_RS08790	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JR311_RS08795	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
JR311_RS08800	COG1648	precorrin-2 dehydrogenase activity
JR311_RS08810	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JR311_RS08815	COG1561	YicC-like family, N-terminal region
JR311_RS08825	COG0194	GDP metabolic process
JR311_RS08835	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JR311_RS08840	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JR311_RS08845	COG0242	peptide deformylase activity
JR311_RS08855	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JR311_RS08855	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JR311_RS08865	COG0631	protein serine/threonine phosphatase activity
JR311_RS08870	COG0515	serine threonine protein kinase
JR311_RS08870	COG2815	serine threonine protein kinase
JR311_RS08880	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JR311_RS08885	COG1564	THIamine pyrophosphokinase
JR311_RS08900	COG1302	Protein conserved in bacteria
JR311_RS08905	COG1461	Dihydroxyacetone kinase
JR311_RS08910	COG1760	l-serine dehydratase
JR311_RS08915	COG1760	l-serine dehydratase
JR311_RS08920	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JR311_RS08935	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JR311_RS08940	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS08955	COG1196	nuclear chromosome segregation
JR311_RS08960	COG0552	protein localization to endoplasmic reticulum
JR311_RS08975	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JR311_RS08985	COG1837	Belongs to the UPF0109 family
JR311_RS09010	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JR311_RS09025	COG2257	FlhB HrpN YscU SpaS Family
JR311_RS09035	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JR311_RS09040	COG0758	DNA mediated transformation
JR311_RS09045	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JR311_RS09055	COG4974	Belongs to the 'phage' integrase family
JR311_RS09075	COG1815	bacterial-type flagellum-dependent cell motility
JR311_RS09080	COG1558	bacterial-type flagellum-dependent cell motility
JR311_RS09085	COG1677	Flagellar hook-basal body complex protein FliE
JR311_RS09090	COG1766	The M ring may be actively involved in energy transduction
JR311_RS09095	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JR311_RS09100	COG1317	bacterial-type flagellum organization
JR311_RS09105	COG1157	protein secretion by the type III secretion system
JR311_RS09110	COG2882	bacterial-type flagellum organization
JR311_RS09115	COG3334	PFAM MgtE intracellular
JR311_RS09120	COG3144	bacterial-type flagellum assembly
JR311_RS09125	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
JR311_RS09130	COG4786	Flagellar basal body rod
JR311_RS09135	COG1582	Flagellar protein (FlbD)
JR311_RS09140	COG1580	Controls the rotational direction of flagella during chemotaxis
JR311_RS09145	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JR311_RS09150	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JR311_RS09150	COG1776	CheC inhibitor of MCP methylation
JR311_RS09155	COG2201	protein-glutamate methylesterase activity
JR311_RS09160	COG3190	flagellar
JR311_RS09165	COG1338	Plays a role in the flagellum-specific transport system
JR311_RS09170	COG1987	bacterial-type flagellum assembly
JR311_RS09175	COG1684	flagellar biosynthetic protein fliR
JR311_RS09180	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JR311_RS09185	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JR311_RS09190	COG1419	protein localization to endoplasmic reticulum
JR311_RS09195	COG0455	bacterial-type flagellum organization
JR311_RS09200	COG2201	protein-glutamate methylesterase activity
JR311_RS09205	COG2198	Histidine kinase
JR311_RS09205	COG0643	Histidine kinase
JR311_RS09210	COG0835	chemotaxis
JR311_RS09215	COG1776	CheC inhibitor of MCP methylation
JR311_RS09225	COG1191	sigma factor activity
JR311_RS09255	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JR311_RS09260	COG4589	Belongs to the CDS family
JR311_RS09270	COG0750	zinc metalloprotease
JR311_RS09280	COG2176	DNA-directed DNA polymerase activity
JR311_RS09290	COG0195	Participates in both transcription termination and antitermination
JR311_RS09295	COG2740	Nucleic-acid-binding protein implicated in transcription termination
JR311_RS09300	COG1358	cellular component organization or biogenesis
JR311_RS09310	COG1550	Protein conserved in bacteria
JR311_RS09325	COG0196	riboflavin kinase activity
JR311_RS09340	COG0726	polysaccharide deacetylase
JR311_RS09345	COG0612	Peptidase, M16
JR311_RS09350	COG1873	PFAM PRC-barrel domain
JR311_RS09355	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JR311_RS09360	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JR311_RS09365	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JR311_RS09370	COG0527	aspartate kinase activity
JR311_RS09380	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JR311_RS09385	COG0740	serine-type endopeptidase activity
JR311_RS09395	COG4980	gas vesicle protein
JR311_RS09395	COG1674	ftsk spoiiie
JR311_RS09400	COG2188	Transcriptional regulator
JR311_RS09405	COG2814	Major facilitator Superfamily
JR311_RS09410	COG1846	Transcriptional regulator
JR311_RS09415	COG1033	growth of symbiont in host cell
JR311_RS09415	COG2409	Drug exporters of the RND superfamily
JR311_RS09420	COG0612	Peptidase, M16
JR311_RS09425	COG0612	Peptidase, M16
JR311_RS09430	COG0300	oxidoreductase activity
JR311_RS09445	COG1426	Protein conserved in bacteria
JR311_RS09450	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JR311_RS09465	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JR311_RS09475	COG1692	metallophosphoesterase
JR311_RS09480	COG2359	stage V sporulation protein S
JR311_RS09500	COG4550	Control of competence regulator ComK, YlbF/YmcA
JR311_RS09545	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JR311_RS09550	COG3425	synthase
JR311_RS09555	COG1024	Enoyl-CoA hydratase
JR311_RS09560	COG1024	Enoyl-CoA hydratase
JR311_RS09565	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS09565	COG0318	PFAM AMP-dependent synthetase and ligase
JR311_RS09565	COG0300	oxidoreductase activity
JR311_RS09565	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS09565	COG3321	synthase
JR311_RS09570	COG4221	oxidoreductase activity
JR311_RS09570	COG0300	oxidoreductase activity
JR311_RS09570	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JR311_RS09570	COG3321	synthase
JR311_RS09575	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS09575	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JR311_RS09575	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS09575	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JR311_RS09575	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS09575	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS09575	COG3321	synthase
JR311_RS09575	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JR311_RS09575	COG3321	synthase
JR311_RS09575	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JR311_RS09580	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS09580	COG3321	synthase
JR311_RS09580	COG4221	oxidoreductase activity
JR311_RS09580	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS09585	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
JR311_RS09585	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JR311_RS09585	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JR311_RS09585	COG3321	synthase
JR311_RS09590	COG2124	cytochrome p450
JR311_RS09595	COG3209	COG3209 Rhs family protein
JR311_RS09600	COG3619	membrane
JR311_RS09610	COG1404	Belongs to the peptidase S8 family
JR311_RS09620	COG4195	phage-related replication protein
JR311_RS09625	COG1764	response to oxidative stress
JR311_RS09635	COG2076	Multidrug Resistance protein
JR311_RS09675	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JR311_RS09680	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JR311_RS09685	COG4112	unkown
JR311_RS09690	COG0860	N-Acetylmuramoyl-L-alanine amidase
JR311_RS09695	COG0464	growth
JR311_RS09700	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JR311_RS09705	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
JR311_RS09710	COG0789	Transcriptional regulator
JR311_RS09715	COG0174	glutamine synthetase
JR311_RS09745	COG2211	Major facilitator Superfamily
JR311_RS09750	COG3507	Belongs to the glycosyl hydrolase 43 family
JR311_RS09765	COG1070	Carbohydrate kinase
JR311_RS09770	COG3848	Pyruvate phosphate dikinase
JR311_RS09770	COG0574	Belongs to the PEP-utilizing enzyme family
JR311_RS09790	COG1064	alcohol dehydrogenase
JR311_RS09815	COG0456	acetyltransferase
JR311_RS09835	COG3397	chitin binding
JR311_RS09855	COG5434	Belongs to the glycosyl hydrolase 28 family
JR311_RS09860	COG0756	dUTP diphosphatase activity
JR311_RS09865	COG4195	phage-related replication protein
JR311_RS09900	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JR311_RS09910	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JR311_RS09930	COG0785	Cytochrome C biogenesis protein
JR311_RS09935	COG2201	protein-glutamate methylesterase activity
JR311_RS09940	COG4846	Membrane protein involved in cytochrome C biogenesis
JR311_RS09950	COG0071	Belongs to the small heat shock protein (HSP20) family
JR311_RS09965	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JR311_RS09970	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JR311_RS09990	COG0824	Thioesterase
JR311_RS10000	COG4841	protein insertion into membrane
JR311_RS10010	COG1832	CoA-binding protein
JR311_RS10015	COG0187	DNA topoisomerase II activity
JR311_RS10020	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JR311_RS10030	COG1115	amino acid carrier protein
JR311_RS10040	COG1063	alcohol dehydrogenase
JR311_RS10045	COG0800	Aldolase
JR311_RS10050	COG1312	Catalyzes the dehydration of D-mannonate
JR311_RS10055	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS10060	COG1609	Transcriptional regulator
JR311_RS10065	COG2271	Major facilitator Superfamily
JR311_RS10110	COG2205	protein histidine kinase activity
JR311_RS10115	COG0745	RESPONSE REGULATOR receiver
JR311_RS10125	COG3507	Belongs to the glycosyl hydrolase 43 family
JR311_RS10150	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS10155	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JR311_RS10160	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JR311_RS10165	COG2610	gluconate transmembrane transporter activity
JR311_RS10170	COG2124	cytochrome p450
JR311_RS10190	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JR311_RS10200	COG2246	polysaccharide biosynthetic process
JR311_RS10205	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JR311_RS10210	COG0586	Pfam SNARE associated Golgi protein
JR311_RS10215	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JR311_RS10220	COG1024	Enoyl-CoA hydratase
JR311_RS10225	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JR311_RS10230	COG0511	ligase activity, forming carbon-carbon bonds
JR311_RS10235	COG0439	Biotin carboxylase
JR311_RS10240	COG0318	PFAM AMP-dependent synthetase and ligase
JR311_RS10245	COG1960	acyl-CoA dehydrogenase activity
JR311_RS10250	COG1649	PFAM Uncharacterised BCR, COG1649
JR311_RS10260	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS10260	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
JR311_RS10270	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS10275	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS10280	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS10285	COG2027	D-alanyl-D-alanine carboxypeptidase
JR311_RS10290	COG2017	converts alpha-aldose to the beta-anomer
JR311_RS10295	COG0534	Mate efflux family protein
JR311_RS10310	COG0582	viral genome integration into host DNA
JR311_RS10315	COG0166	Belongs to the GPI family
JR311_RS10320	COG0405	Gamma-glutamyltransferase
JR311_RS10325	COG2814	Major facilitator Superfamily
JR311_RS10330	COG0640	Transcriptional regulator
JR311_RS10345	COG0604	alcohol dehydrogenase
JR311_RS10355	COG0493	'glutamate synthase
JR311_RS10360	COG0067	glutamate synthase
JR311_RS10360	COG0069	glutamate synthase activity
JR311_RS10360	COG0070	glutamate synthase
JR311_RS10365	COG0583	DNA-binding transcription factor activity
JR311_RS10370	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JR311_RS10385	COG0300	oxidoreductase activity
JR311_RS10390	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
JR311_RS10400	COG2814	Major facilitator Superfamily
JR311_RS10405	COG1070	Carbohydrate kinase
JR311_RS10410	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JR311_RS10415	COG0243	molybdopterin cofactor binding
JR311_RS10440	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS10445	COG1733	regulation of RNA biosynthetic process
JR311_RS10450	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JR311_RS10455	COG0662	Cupin 2, conserved barrel domain protein
JR311_RS10455	COG2207	Transcriptional regulator
JR311_RS10460	COG1309	transcriptional regulator
JR311_RS10465	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JR311_RS10475	COG0640	Transcriptional regulator
JR311_RS10480	COG0741	lytic transglycosylase activity
JR311_RS10485	COG2322	membrane
JR311_RS10500	COG1619	proteins homologs of microcin C7 resistance protein MccF
JR311_RS10510	COG3584	3D domain protein
JR311_RS10510	COG1388	LysM domain
JR311_RS10515	COG0514	ATP-dependent DNA helicase (RecQ)
JR311_RS10525	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
JR311_RS10530	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JR311_RS10545	COG0071	Belongs to the small heat shock protein (HSP20) family
JR311_RS10575	COG1012	belongs to the aldehyde dehydrogenase family
JR311_RS10580	COG1657	PFAM Prenyltransferase squalene oxidase
JR311_RS10585	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JR311_RS10590	COG0733	neurotransmitter:sodium symporter activity
JR311_RS10595	COG0385	Bile acid
JR311_RS10605	COG0508	dehydrogenase complex catalyzes the overall conversion of
JR311_RS10615	COG4548	von Willebrand factor, type A
JR311_RS10620	COG0714	Associated with various cellular activities
JR311_RS10625	COG2032	superoxide dismutase activity
JR311_RS10630	COG1388	LysM domain
JR311_RS10630	COG0791	NLP P60 protein
JR311_RS10635	COG1819	glycosyl
JR311_RS10640	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JR311_RS10645	COG0534	Mate efflux family protein
JR311_RS10650	COG1366	Belongs to the anti-sigma-factor antagonist family
JR311_RS10655	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JR311_RS10660	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JR311_RS10670	COG2962	Rard protein
JR311_RS10685	COG1942	4-Oxalocrotonate Tautomerase
JR311_RS10695	COG1733	regulation of RNA biosynthetic process
JR311_RS10700	COG0778	Nitroreductase
JR311_RS10705	COG0400	carboxylic ester hydrolase activity
JR311_RS10710	COG0346	lactoylglutathione lyase activity
JR311_RS10720	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JR311_RS10730	COG2723	6-phospho-beta-galactosidase activity
JR311_RS10735	COG2188	Transcriptional regulator
JR311_RS10740	COG0793	Belongs to the peptidase S41A family
JR311_RS10740	COG3409	Peptidoglycan-binding domain 1 protein
JR311_RS10745	COG2226	methyltransferase
JR311_RS10755	COG1876	peptidase activity
JR311_RS10775	COG0671	phosphoesterase, PA-phosphatase related
JR311_RS10810	COG1509	lysine 2,3-aminomutase activity
JR311_RS10815	COG0456	acetyltransferase
JR311_RS10820	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JR311_RS10825	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JR311_RS10830	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JR311_RS10835	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JR311_RS10840	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
JR311_RS10850	COG0456	acetyltransferase
JR311_RS10855	COG0463	Glycosyl transferase, family 2
JR311_RS10870	COG4641	Protein conserved in bacteria
JR311_RS10880	COG1086	Polysaccharide biosynthesis protein
JR311_RS10895	COG1846	Transcriptional regulator
JR311_RS10900	COG4698	Protein conserved in bacteria
JR311_RS10905	COG2755	lipolytic protein G-D-S-L family
JR311_RS10910	COG1999	signal sequence binding
JR311_RS10920	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JR311_RS10925	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JR311_RS10930	COG1272	protein, Hemolysin III
JR311_RS10935	COG0204	Acyl-transferase
JR311_RS10940	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JR311_RS10955	COG2521	methyltransferase
JR311_RS10955	COG2136	Putative SAM-dependent methyltransferase
JR311_RS10970	COG1413	lyase activity
JR311_RS10975	COG1418	mRNA catabolic process
JR311_RS10980	COG0386	Belongs to the glutathione peroxidase family
JR311_RS10990	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JR311_RS11000	COG1278	Cold shock
JR311_RS11020	COG0328	RNA-DNA hybrid ribonuclease activity
JR311_RS11025	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
JR311_RS11030	COG0328	RNA-DNA hybrid ribonuclease activity
JR311_RS11040	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JR311_RS11055	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JR311_RS11065	COG1755	Isoprenylcysteine carboxyl methyltransferase
JR311_RS11070	COG3424	synthase
JR311_RS11095	COG1335	isochorismatase
JR311_RS11105	COG2233	PERMEase
JR311_RS11115	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
JR311_RS11120	COG1199	ATP-dependent helicase activity
JR311_RS11135	COG0116	Belongs to the methyltransferase superfamily
JR311_RS11165	COG3359	exonuclease
JR311_RS11170	COG1111	helicase
JR311_RS11170	COG1205	dead DEAH box helicase
JR311_RS11175	COG2190	(PTS) system
JR311_RS11180	COG0071	Belongs to the small heat shock protein (HSP20) family
JR311_RS11220	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JR311_RS11220	COG4499	WXG100 protein secretion system (Wss), protein YukC
JR311_RS11230	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JR311_RS11235	COG3935	DnaD domain protein
JR311_RS11245	COG0436	Aminotransferase
JR311_RS11250	COG5353	protein conserved in bacteria
JR311_RS11260	COG1199	ATP-dependent helicase activity
JR311_RS11260	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JR311_RS11290	COG0438	transferase activity, transferring glycosyl groups
JR311_RS11295	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JR311_RS11310	COG1694	Mazg nucleotide pyrophosphohydrolase
JR311_RS11315	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JR311_RS11320	COG2140	Oxalate decarboxylase
JR311_RS11330	COG4347	Protein of unknown function (DUF1405)
JR311_RS11335	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
JR311_RS11335	COG2010	Cytochrome c
JR311_RS11340	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
JR311_RS11345	COG0723	plastoquinol--plastocyanin reductase activity
JR311_RS11360	COG0457	Tetratricopeptide repeat
JR311_RS11370	COG0287	Prephenate dehydrogenase
JR311_RS11405	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JR311_RS11410	COG4401	Chorismate mutase type I
JR311_RS11425	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
JR311_RS11430	COG0105	UTP biosynthetic process
JR311_RS11435	COG0142	geranyltranstransferase activity
JR311_RS11445	COG0142	geranyltranstransferase activity
JR311_RS11460	COG0776	regulation of translation
JR311_RS11465	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JR311_RS11505	COG0539	negative regulation of cytoplasmic translation
JR311_RS11520	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
JR311_RS11525	COG2959	enzyme of heme biosynthesis
JR311_RS11530	COG3773	Cell wall hydrolase
JR311_RS11530	COG3409	Peptidoglycan-binding domain 1 protein
JR311_RS11535	COG2339	peptidase activity
JR311_RS11540	COG0492	ferredoxin-NADP+ reductase activity
JR311_RS11545	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JR311_RS11550	COG4862	establishment of competence for transformation
JR311_RS11555	COG1408	metallophosphoesterase
JR311_RS11565	COG1388	LysM domain
JR311_RS11570	COG1266	CAAX protease self-immunity
JR311_RS11575	COG0514	ATP-dependent DNA helicase (RecQ)
JR311_RS11580	COG4955	Helix-turn-helix domain
JR311_RS11585	COG1141	Ferredoxin
JR311_RS11590	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JR311_RS11595	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JR311_RS11605	COG1595	DNA-templated transcription, initiation
JR311_RS11610	COG5002	protein histidine kinase activity
JR311_RS11615	COG0745	RESPONSE REGULATOR receiver
JR311_RS11620	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JR311_RS11625	COG1333	cytochrome c biogenesis protein
JR311_RS11630	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JR311_RS11635	COG1187	pseudouridine synthase activity
JR311_RS11640	COG0700	Nucleoside recognition
JR311_RS11645	COG2715	membrane protein required for spore maturation
JR311_RS11650	COG1686	Belongs to the peptidase S11 family
JR311_RS11675	COG1547	Domain of unknown function (DUF309)
JR311_RS11680	COG0456	acetyltransferase
JR311_RS11695	COG0307	riboflavin synthase, alpha
JR311_RS11700	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JR311_RS11700	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JR311_RS11710	COG0681	Belongs to the peptidase S26 family
JR311_RS11720	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JR311_RS11725	COG4086	secreted protein
JR311_RS11730	COG0019	diaminopimelate decarboxylase activity
JR311_RS11735	COG0697	spore germination
JR311_RS11750	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JR311_RS11770	COG1191	sigma factor activity
JR311_RS11780	COG1366	Belongs to the anti-sigma-factor antagonist family
JR311_RS11785	COG1686	Belongs to the peptidase S11 family
JR311_RS11790	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
JR311_RS11795	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
JR311_RS11800	COG4974	Belongs to the 'phage' integrase family
JR311_RS11810	COG0735	belongs to the Fur family
JR311_RS11815	COG1300	Membrane
JR311_RS11830	COG0281	malic enzyme
JR311_RS11835	COG1757	Na H antiporter
JR311_RS11840	COG1027	Aspartate ammonia-lyase
JR311_RS11845	COG0252	asparaginase activity
JR311_RS11850	COG1396	sequence-specific DNA binding
JR311_RS11855	COG1379	DNA repair
JR311_RS11860	COG0494	nUDIX hydrolase
JR311_RS11870	COG0667	Aldo Keto reductase
JR311_RS11880	COG1073	alpha beta
JR311_RS11890	COG4918	Iron-sulphur cluster biosynthesis
JR311_RS11895	COG0456	acetyltransferase
JR311_RS11895	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JR311_RS11900	COG2329	Antibiotic biosynthesis monooxygenase
JR311_RS11905	COG0456	acetyltransferase
JR311_RS11910	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JR311_RS11925	COG0628	permease
JR311_RS11935	COG0346	lactoylglutathione lyase activity
JR311_RS11945	COG3048	D-serine ammonia-lyase activity
JR311_RS11950	COG0300	oxidoreductase activity
JR311_RS11955	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JR311_RS11960	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JR311_RS11965	COG1024	Enoyl-CoA hydratase
JR311_RS11970	COG3425	synthase
JR311_RS11975	COG2124	cytochrome p450
JR311_RS11980	COG3321	synthase
JR311_RS11980	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JR311_RS11980	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JR311_RS11980	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS11980	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS11985	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS11985	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JR311_RS11985	COG3321	synthase
JR311_RS11985	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JR311_RS11985	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS11990	COG0300	oxidoreductase activity
JR311_RS11990	COG0318	PFAM AMP-dependent synthetase and ligase
JR311_RS11990	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS11990	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS11990	COG3321	synthase
JR311_RS11995	COG0300	oxidoreductase activity
JR311_RS11995	COG0318	PFAM AMP-dependent synthetase and ligase
JR311_RS11995	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS11995	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS11995	COG3321	synthase
JR311_RS12000	COG3321	synthase
JR311_RS12000	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JR311_RS12000	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JR311_RS12000	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS12000	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS12005	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS12005	COG0300	oxidoreductase activity
JR311_RS12005	COG0318	PFAM AMP-dependent synthetase and ligase
JR311_RS12005	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS12005	COG3321	synthase
JR311_RS12010	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS12010	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JR311_RS12010	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JR311_RS12010	COG3321	synthase
JR311_RS12010	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS12015	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS12020	COG0318	PFAM AMP-dependent synthetase and ligase
JR311_RS12035	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JR311_RS12035	COG2070	2-Nitropropane dioxygenase
JR311_RS12040	COG0250	Participates in transcription elongation, termination and antitermination
JR311_RS12060	COG0596	Alpha beta hydrolase
JR311_RS12075	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JR311_RS12080	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JR311_RS12095	COG0706	membrane insertase activity
JR311_RS12100	COG2195	Cleaves the N-terminal amino acid of tripeptides
JR311_RS12105	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JR311_RS12110	COG0346	lactoylglutathione lyase activity
JR311_RS12120	COG1376	ErfK ybiS ycfS ynhG family protein
JR311_RS12125	COG4129	membrane
JR311_RS12130	COG1126	abc transporter atp-binding protein
JR311_RS12135	COG0765	amino acid transport
JR311_RS12140	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JR311_RS12150	COG1597	lipid kinase activity
JR311_RS12155	COG0508	dehydrogenase complex catalyzes the overall conversion of
JR311_RS12160	COG0022	dehydrogenase e1 component
JR311_RS12165	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JR311_RS12170	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JR311_RS12175	COG3426	butyrate kinase activity
JR311_RS12180	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JR311_RS12185	COG0280	phosphate acetyltransferase
JR311_RS12190	COG3290	protein histidine kinase activity
JR311_RS12190	COG3829	transcription factor binding
JR311_RS12200	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
JR311_RS12205	COG2079	MmgE PrpD family protein
JR311_RS12210	COG0372	Belongs to the citrate synthase family
JR311_RS12215	COG1960	acyl-CoA dehydrogenase activity
JR311_RS12220	COG1250	3-hydroxyacyl-CoA dehydrogenase
JR311_RS12225	COG0183	Belongs to the thiolase family
JR311_RS12230	COG0584	glycerophosphoryl diester phosphodiesterase
JR311_RS12235	COG0860	N-Acetylmuramoyl-L-alanine amidase
JR311_RS12260	COG1902	pentaerythritol trinitrate reductase activity
JR311_RS12275	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JR311_RS12280	COG0745	RESPONSE REGULATOR receiver
JR311_RS12285	COG0750	zinc metalloprotease
JR311_RS12290	COG0497	DNA recombination
JR311_RS12300	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
JR311_RS12310	COG0142	geranyltranstransferase activity
JR311_RS12320	COG1570	exodeoxyribonuclease VII activity
JR311_RS12335	COG1302	Protein conserved in bacteria
JR311_RS12340	COG0439	Biotin carboxylase
JR311_RS12345	COG0511	ligase activity, forming carbon-carbon bonds
JR311_RS12385	COG3854	ATPases associated with a variety of cellular activities
JR311_RS12400	COG0006	proline dipeptidase activity
JR311_RS12410	COG3872	metal-dependent enzyme
JR311_RS12420	COG1752	Esterase of the alpha-beta hydrolase superfamily
JR311_RS12435	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JR311_RS12455	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JR311_RS12470	COG1396	sequence-specific DNA binding
JR311_RS12480	COG0681	Belongs to the peptidase S26 family
JR311_RS12505	COG4940	Competence protein ComGF
JR311_RS12515	COG4970	Tfp pilus assembly protein FimT
JR311_RS12520	COG4537	Required for transformation and DNA binding
JR311_RS12525	COG1459	type II secretion system
JR311_RS12530	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JR311_RS12535	COG0598	Magnesium transport protein CorA
JR311_RS12540	COG1253	flavin adenine dinucleotide binding
JR311_RS12545	COG1366	Belongs to the anti-sigma-factor antagonist family
JR311_RS12555	COG1393	Belongs to the ArsC family
JR311_RS12565	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JR311_RS12575	COG0011	TIGRFAM Protein of
JR311_RS12585	COG2866	Carboxypeptidase
JR311_RS12590	COG1940	carbohydrate kinase activity
JR311_RS12595	COG4483	Protein conserved in bacteria
JR311_RS12600	COG1757	Na H antiporter
JR311_RS12610	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JR311_RS12625	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JR311_RS12630	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JR311_RS12635	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JR311_RS12640	COG0581	inorganic phosphate transmembrane transporter activity
JR311_RS12645	COG0573	inorganic phosphate transmembrane transporter activity
JR311_RS12650	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JR311_RS12655	COG0768	penicillin binding
JR311_RS12660	COG0477	Major facilitator Superfamily
JR311_RS12665	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JR311_RS12670	COG2839	Protein conserved in bacteria
JR311_RS12675	COG5521	maltodextrose utilization protein MalA
JR311_RS12680	COG1388	LysM domain
JR311_RS12690	COG4709	membrane
JR311_RS12695	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
JR311_RS12700	COG0735	belongs to the Fur family
JR311_RS12705	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JR311_RS12720	COG0513	Belongs to the DEAD box helicase family
JR311_RS12735	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JR311_RS12740	COG2384	SAM-dependent methyltransferase
JR311_RS12745	COG2010	Cytochrome c
JR311_RS12750	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JR311_RS12755	COG0358	DNA primase activity
JR311_RS12770	COG0517	IMP dehydrogenase activity
JR311_RS12775	COG0751	glycine-tRNA ligase activity
JR311_RS12795	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JR311_RS12800	COG0295	cytidine deaminase activity
JR311_RS12805	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
JR311_RS12815	COG1480	7TM receptor with intracellular HD hydrolase
JR311_RS12820	COG1702	phosphate starvation-inducible protein PhoH
JR311_RS12825	COG0561	phosphatase activity
JR311_RS12840	COG4864	UPF0365 protein
JR311_RS12845	COG1030	water channel activity
JR311_RS12850	COG1610	YqeY-like protein
JR311_RS12860	COG1283	sodium-dependent phosphate transmembrane transporter activity
JR311_RS12865	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JR311_RS12870	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JR311_RS12900	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JR311_RS12915	COG0860	N-Acetylmuramoyl-L-alanine amidase
JR311_RS12930	COG1466	dna polymerase III delta subunit
JR311_RS12945	COG0658	competence protein
JR311_RS12945	COG2333	competence protein COMEC
JR311_RS12950	COG2131	deaminase
JR311_RS12955	COG1555	photosystem II stabilization
JR311_RS12955	COG1596	polysaccharide export
JR311_RS12960	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JR311_RS12965	COG2226	methyltransferase
JR311_RS12970	COG0799	negative regulation of ribosome biogenesis
JR311_RS12975	COG1713	HD superfamily hydrolase involved in NAD metabolism
JR311_RS12985	COG1534	Rna-binding protein
JR311_RS12990	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JR311_RS12995	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JR311_RS13000	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
JR311_RS13010	COG2755	lipolytic protein G-D-S-L family
JR311_RS13020	COG0398	Pfam SNARE associated Golgi protein
JR311_RS13045	COG1794	racemase activity, acting on amino acids and derivatives
JR311_RS13055	COG1733	regulation of RNA biosynthetic process
JR311_RS13060	COG0656	L-ascorbic acid biosynthetic process
JR311_RS13095	COG0642	Histidine kinase
JR311_RS13095	COG5002	protein histidine kinase activity
JR311_RS13100	COG0745	RESPONSE REGULATOR receiver
JR311_RS13105	COG2311	Membrane
JR311_RS13115	COG0454	-acetyltransferase
JR311_RS13120	COG0563	adenylate kinase activity
JR311_RS13130	COG2814	Major facilitator Superfamily
JR311_RS13140	COG0456	acetyltransferase
JR311_RS13145	COG2318	DinB family
JR311_RS13155	COG0561	phosphatase activity
JR311_RS13160	COG0561	phosphatase activity
JR311_RS13170	COG1482	cell wall glycoprotein biosynthetic process
JR311_RS13175	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JR311_RS13175	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JR311_RS13175	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JR311_RS13180	COG3711	transcriptional antiterminator
JR311_RS13180	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JR311_RS13190	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JR311_RS13195	COG0583	DNA-binding transcription factor activity
JR311_RS13200	COG2814	Major facilitator Superfamily
JR311_RS13205	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JR311_RS13205	COG2124	cytochrome p450
JR311_RS13210	COG1309	transcriptional regulator
JR311_RS13215	COG2226	methyltransferase
JR311_RS13230	COG2116	formate transmembrane transporter activity
JR311_RS13235	COG5609	conserved protein (DUF2294)
JR311_RS13240	COG3383	formate dehydrogenase (NAD+) activity
JR311_RS13245	COG2427	Protein of unknown function (DUF1641)
JR311_RS13255	COG0626	cystathionine gamma-synthase activity
JR311_RS13260	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JR311_RS13285	COG0768	penicillin binding
JR311_RS13300	COG0826	peptidase U32
JR311_RS13305	COG0826	peptidase U32
JR311_RS13310	COG4122	O-methyltransferase activity
JR311_RS13315	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JR311_RS13340	COG0628	permease
JR311_RS13345	COG1126	abc transporter atp-binding protein
JR311_RS13350	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JR311_RS13355	COG0765	amino acid transport
JR311_RS13360	COG0765	amino acid transport
JR311_RS13375	COG3881	PFAM PRC-barrel domain
JR311_RS13380	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JR311_RS13385	COG0457	Tetratricopeptide repeat
JR311_RS13395	COG1104	cysteine desulfurase activity
JR311_RS13400	COG1959	2 iron, 2 sulfur cluster binding
JR311_RS13405	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JR311_RS13410	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JR311_RS13435	COG4991	sh3 domain protein
JR311_RS13435	COG0860	N-Acetylmuramoyl-L-alanine amidase
JR311_RS13435	COG3103	Sh3 type 3 domain protein
JR311_RS13445	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JR311_RS13455	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JR311_RS13455	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
JR311_RS13460	COG5416	Lipopolysaccharide assembly protein A domain
JR311_RS13465	COG0490	domain, Protein
JR311_RS13470	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JR311_RS13470	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JR311_RS13480	COG2244	polysaccharide biosynthetic process
JR311_RS13485	COG2323	membrane
JR311_RS13495	COG1862	Preprotein translocase
JR311_RS13540	COG1388	LysM domain
JR311_RS13550	COG0157	Belongs to the NadC ModD family
JR311_RS13555	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
JR311_RS13560	COG1104	cysteine desulfurase activity
JR311_RS13565	COG1827	regulation of RNA biosynthetic process
JR311_RS13570	COG0077	Prephenate dehydratase
JR311_RS13585	COG3290	protein histidine kinase activity
JR311_RS13590	COG0211	Belongs to the bacterial ribosomal protein bL27 family
JR311_RS13595	COG2868	ribosomal protein
JR311_RS13605	COG1994	Peptidase M50
JR311_RS13610	COG0739	heme binding
JR311_RS13615	COG2894	cell division
JR311_RS13625	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
JR311_RS13635	COG1077	Cell shape determining protein MreB Mrl
JR311_RS13655	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
JR311_RS13660	COG0285	dihydrofolate synthase activity
JR311_RS13665	COG0525	valine-tRNA ligase activity
JR311_RS13675	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JR311_RS13680	COG1388	LysM domain
JR311_RS13690	COG0113	porphobilinogen synthase activity
JR311_RS13695	COG1587	Uroporphyrinogen-III synthase
JR311_RS13705	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JR311_RS13725	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JR311_RS13730	COG0470	DNA polymerase III
JR311_RS13730	COG1067	ATP-dependent peptidase activity
JR311_RS13745	COG1477	protein flavinylation
JR311_RS13745	COG0457	Tetratricopeptide repeat
JR311_RS13760	COG0473	3-isopropylmalate dehydrogenase activity
JR311_RS13775	COG0440	acetolactate synthase activity
JR311_RS13780	COG0028	Belongs to the TPP enzyme family
JR311_RS13805	COG0622	Phosphoesterase
JR311_RS13810	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JR311_RS13820	COG5401	PFAM Sporulation and spore germination
JR311_RS13830	COG1846	Transcriptional regulator
JR311_RS13835	COG2197	response regulator
JR311_RS13840	COG0824	Thioesterase
JR311_RS13845	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JR311_RS13850	COG1053	succinate dehydrogenase
JR311_RS13855	COG2009	succinate dehydrogenase
JR311_RS13860	COG1719	4-vinyl reductase, 4VR
JR311_RS13865	COG0527	aspartate kinase activity
JR311_RS13875	COG3118	belongs to the thioredoxin family
JR311_RS13880	COG3534	alpha-L-arabinofuranosidase
JR311_RS13885	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
JR311_RS13890	COG2086	electron transfer activity
JR311_RS13895	COG1024	Enoyl-CoA hydratase
JR311_RS13900	COG1309	transcriptional regulator
JR311_RS13905	COG0318	PFAM AMP-dependent synthetase and ligase
JR311_RS13915	COG3766	membrane
JR311_RS13925	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JR311_RS13925	COG1796	DNA polymerase
JR311_RS13930	COG1286	toxin biosynthetic process
JR311_RS13945	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JR311_RS13945	COG0072	phenylalanine-tRNA ligase activity
JR311_RS13950	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JR311_RS13955	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JR311_RS13965	COG3835	regulator
JR311_RS13970	COG0277	FAD linked oxidase domain protein
JR311_RS13975	COG0247	lactate metabolic process
JR311_RS13980	COG1966	Carbon starvation protein
JR311_RS13985	COG3534	alpha-L-arabinofuranosidase
JR311_RS13990	COG0395	ABC-type sugar transport system, permease component
JR311_RS13995	COG1175	transmembrane transport
JR311_RS14000	COG1653	transport
JR311_RS14010	COG0647	UMP catabolic process
JR311_RS14015	COG0235	Class ii aldolase
JR311_RS14020	COG1069	ribulokinase activity
JR311_RS14025	COG2160	L-arabinose isomerase activity
JR311_RS14030	COG3507	Belongs to the glycosyl hydrolase 43 family
JR311_RS14035	COG1363	Peptidase, m42
JR311_RS14045	COG3326	Membrane
JR311_RS14050	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JR311_RS14060	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JR311_RS14065	COG1346	cytolysis
JR311_RS14070	COG1380	Effector of murein hydrolase LrgA
JR311_RS14075	COG3279	Response regulator of the LytR AlgR family
JR311_RS14080	COG3275	phosphorelay sensor kinase activity
JR311_RS14085	COG1011	Hydrolase
JR311_RS14100	COG0398	Pfam SNARE associated Golgi protein
JR311_RS14105	COG1484	DNA-dependent DNA replication
JR311_RS14110	COG3611	Membrane attachment protein
JR311_RS14125	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JR311_RS14130	COG1733	regulation of RNA biosynthetic process
JR311_RS14135	COG2814	Major facilitator Superfamily
JR311_RS14140	COG0656	L-ascorbic acid biosynthetic process
JR311_RS14145	COG0237	dephospho-CoA kinase activity
JR311_RS14150	COG1971	Probably functions as a manganese efflux pump
JR311_RS14155	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
JR311_RS14160	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JR311_RS14160	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JR311_RS14165	COG5002	protein histidine kinase activity
JR311_RS14170	COG0745	RESPONSE REGULATOR receiver
JR311_RS14180	COG0538	isocitrate dehydrogenase activity
JR311_RS14185	COG0372	Belongs to the citrate synthase family
JR311_RS14210	COG0628	permease
JR311_RS14215	COG3030	protein affecting phage T7 exclusion by the F plasmid
JR311_RS14220	COG0469	pyruvate kinase activity
JR311_RS14240	COG0281	malic enzyme
JR311_RS14245	COG0587	DNA-directed DNA polymerase activity
JR311_RS14265	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
JR311_RS14275	COG4109	DRTGG domain
JR311_RS14285	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS14300	COG0521	Mo-molybdopterin cofactor biosynthetic process
JR311_RS14310	COG0827	DNA restriction-modification system
JR311_RS14315	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
JR311_RS14320	COG3874	Sporulation protein YtfJ
JR311_RS14330	COG1714	RDD family
JR311_RS14335	COG0616	signal peptide processing
JR311_RS14340	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JR311_RS14345	COG1574	metal-dependent hydrolase with the TIM-barrel fold
JR311_RS14350	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JR311_RS14365	COG1104	cysteine desulfurase activity
JR311_RS14370	COG1114	Component of the transport system for branched-chain amino acids
JR311_RS14380	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JR311_RS14385	COG1309	transcriptional regulator
JR311_RS14390	COG1956	GAF domain-containing protein
JR311_RS14395	COG2203	Gaf domain
JR311_RS14395	COG2199	diguanylate cyclase activity
JR311_RS14410	COG0457	Tetratricopeptide repeat
JR311_RS14435	COG1017	nitric oxide dioxygenase activity
JR311_RS14435	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JR311_RS14445	COG0693	protein deglycase activity
JR311_RS14460	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JR311_RS14465	COG1378	Sugar-specific transcriptional regulator TrmB
JR311_RS14485	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JR311_RS14490	COG0454	-acetyltransferase
JR311_RS14495	COG0517	IMP dehydrogenase activity
JR311_RS14500	COG0123	including yeast histone deacetylase and acetoin utilization protein
JR311_RS14505	COG1360	Flagellar Motor Protein
JR311_RS14510	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JR311_RS14515	COG1609	Transcriptional regulator
JR311_RS14520	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
JR311_RS14520	COG1605	Chorismate mutase
JR311_RS14525	COG3118	belongs to the thioredoxin family
JR311_RS14530	COG4980	gas vesicle protein
JR311_RS14535	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
JR311_RS14545	COG1674	ftsk spoiiie
JR311_RS14550	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JR311_RS14560	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JR311_RS14570	COG1363	Peptidase, m42
JR311_RS14575	COG5584	Small secreted protein
JR311_RS14580	COG0281	malic enzyme
JR311_RS14585	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JR311_RS14600	COG0510	thiamine kinase activity
JR311_RS14605	COG1597	lipid kinase activity
JR311_RS14615	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
JR311_RS14620	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JR311_RS14625	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JR311_RS14630	COG2252	PERMEase
JR311_RS14635	COG4473	ABC transporter
JR311_RS14640	COG1131	(ABC) transporter
JR311_RS14645	COG1349	DNA-binding transcription factor activity
JR311_RS14650	COG1187	pseudouridine synthase activity
JR311_RS14655	COG2244	polysaccharide biosynthetic process
JR311_RS14660	COG2081	HI0933 family
JR311_RS14665	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JR311_RS14675	COG1609	Transcriptional regulator
JR311_RS14680	COG1653	transport
JR311_RS14685	COG1175	transmembrane transport
JR311_RS14690	COG0395	ABC-type sugar transport system, permease component
JR311_RS14695	COG1486	melibiose metabolic process
JR311_RS14705	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JR311_RS14720	COG1366	Belongs to the anti-sigma-factor antagonist family
JR311_RS14720	COG2202	Pas domain
JR311_RS14725	COG2814	Major facilitator Superfamily
JR311_RS14730	COG5522	Integral membrane protein (intg_mem_TP0381)
JR311_RS14735	COG0577	efflux transmembrane transporter activity
JR311_RS14740	COG1136	(ABC) transporter
JR311_RS14745	COG2205	protein histidine kinase activity
JR311_RS14750	COG0745	RESPONSE REGULATOR receiver
JR311_RS14755	COG0577	efflux transmembrane transporter activity
JR311_RS14760	COG1136	(ABC) transporter
JR311_RS14780	COG1131	(ABC) transporter
JR311_RS14785	COG1725	Transcriptional regulator
JR311_RS14795	COG1242	4 iron, 4 sulfur cluster binding
JR311_RS14800	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
JR311_RS14815	COG2267	carboxylic ester hydrolase activity
JR311_RS14820	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JR311_RS14825	COG1113	amino acid transport
JR311_RS14830	COG0367	asparagine synthase
JR311_RS14850	COG1506	peptidase
JR311_RS14855	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JR311_RS14860	COG1116	anion transmembrane transporter activity
JR311_RS14865	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JR311_RS14870	COG0494	nUDIX hydrolase
JR311_RS14875	COG4824	toxin secretion phage lysis holin
JR311_RS14880	COG0783	Belongs to the Dps family
JR311_RS14905	COG0288	reversible hydration of carbon dioxide
JR311_RS14915	COG1271	oxidase subunit
JR311_RS14920	COG1294	oxidase, subunit
JR311_RS14930	COG4948	Mandelate Racemase Muconate Lactonizing
JR311_RS14940	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
JR311_RS14945	COG0596	Alpha beta hydrolase
JR311_RS14955	COG1169	isochorismate synthase
JR311_RS14960	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JR311_RS14965	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
JR311_RS15090	COG3859	Proton-coupled thiamine transporter YuaJ
JR311_RS15095	COG2268	Band 7 protein
JR311_RS15100	COG1585	Membrane protein implicated in regulation of membrane protease activity
JR311_RS15105	COG2318	DinB family
JR311_RS15115	COG1454	alcohol dehydrogenase
JR311_RS15120	COG1012	belongs to the aldehyde dehydrogenase family
JR311_RS15125	COG1510	regulation of RNA biosynthetic process
JR311_RS15135	COG0569	domain protein
JR311_RS15140	COG1705	Flagellar rod assembly protein muramidase FlgJ
JR311_RS15145	COG1017	nitric oxide dioxygenase activity
JR311_RS15145	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JR311_RS15160	COG0457	Tetratricopeptide repeat
JR311_RS15185	COG0628	permease
JR311_RS15190	COG0673	inositol 2-dehydrogenase activity
JR311_RS15195	COG0693	protein deglycase activity
JR311_RS15200	COG0840	transmembrane signaling receptor activity
JR311_RS15205	COG0840	transmembrane signaling receptor activity
JR311_RS15210	COG0840	transmembrane signaling receptor activity
JR311_RS15215	COG0840	transmembrane signaling receptor activity
JR311_RS15230	COG2070	2-Nitropropane dioxygenase
JR311_RS15235	COG0432	Pfam Uncharacterised protein family UPF0047
JR311_RS15240	COG0366	Alpha amylase catalytic
JR311_RS15245	COG1253	flavin adenine dinucleotide binding
JR311_RS15250	COG2738	Putative neutral zinc metallopeptidase
JR311_RS15265	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JR311_RS15290	COG1335	isochorismatase
JR311_RS15295	COG1979	alcohol dehydrogenase
JR311_RS15300	COG1979	alcohol dehydrogenase
JR311_RS15305	COG2155	Conserved Protein
JR311_RS15310	COG1098	S1 RNA binding domain
JR311_RS15315	COG0436	Aminotransferase
JR311_RS15320	COG1522	sequence-specific DNA binding
JR311_RS15325	COG2267	carboxylic ester hydrolase activity
JR311_RS15335	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JR311_RS15340	COG2205	protein histidine kinase activity
JR311_RS15350	COG5018	Exonuclease
JR311_RS15355	COG2814	Major facilitator Superfamily
JR311_RS15360	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JR311_RS15365	COG3011	Protein conserved in bacteria
JR311_RS15375	COG3290	protein histidine kinase activity
JR311_RS15380	COG4565	transcriptional regulatory protein
JR311_RS15385	COG1744	ABC transporter substrate-binding protein PnrA-like
JR311_RS15390	COG3845	ABC transporter
JR311_RS15395	COG4603	Belongs to the binding-protein-dependent transport system permease family
JR311_RS15400	COG1079	Belongs to the binding-protein-dependent transport system permease family
JR311_RS15410	COG2111	Na H antiporter
JR311_RS15410	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JR311_RS15415	COG2111	Na H antiporter
JR311_RS15420	COG1006	Multisubunit Na H antiporter MnhC subunit
JR311_RS15425	COG0651	ATP synthesis coupled electron transport
JR311_RS15430	COG1863	multisubunit Na H antiporter MnhE subunit
JR311_RS15435	COG2212	antiporter activity
JR311_RS15440	COG1320	monovalent cation:proton antiporter activity
JR311_RS15445	COG2050	protein possibly involved in aromatic compounds catabolism
JR311_RS15450	COG2197	response regulator
JR311_RS15455	COG4585	Histidine kinase
JR311_RS15465	COG0142	geranyltranstransferase activity
JR311_RS15480	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
JR311_RS15485	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JR311_RS15490	COG1335	isochorismatase
JR311_RS15495	COG5506	Protein of unknown function (DUF1694)
JR311_RS15510	COG0628	permease
JR311_RS15520	COG1418	mRNA catabolic process
JR311_RS15525	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS15535	COG1511	domain protein
JR311_RS15540	COG1674	ftsk spoiiie
JR311_RS15540	COG0433	COG0433 Predicted ATPase
JR311_RS15545	COG4499	WXG100 protein secretion system (Wss), protein YukC
JR311_RS15550	COG5417	Belongs to the EsaB family
JR311_RS15555	COG4842	Belongs to the WXG100 family
JR311_RS15560	COG2508	Transcriptional regulator
JR311_RS15560	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
JR311_RS15565	COG0686	Belongs to the AlaDH PNT family
JR311_RS15570	COG5634	Uncharacterized conserved protein (DUF2278)
JR311_RS15575	COG3251	PFAM MbtH domain protein
JR311_RS15580	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JR311_RS15585	COG1535	isochorismatase
JR311_RS15585	COG3433	isochorismatase activity
JR311_RS15590	COG1021	2,3-dihydroxybenzoate-AMP ligase
JR311_RS15595	COG1169	isochorismate synthase
JR311_RS15600	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS15605	COG2819	hydrolase of the alpha beta superfamily
JR311_RS15610	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JR311_RS15615	COG1268	BioY protein
JR311_RS15620	COG2056	Na+-H+ antiporter family
JR311_RS15630	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
JR311_RS15635	COG3584	3D domain protein
JR311_RS15650	COG1252	NADH dehydrogenase
JR311_RS15680	COG1131	(ABC) transporter
JR311_RS15700	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JR311_RS15705	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
JR311_RS15710	COG0316	Belongs to the HesB IscA family
JR311_RS15720	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JR311_RS15730	COG1252	NADH dehydrogenase
JR311_RS15735	COG4837	Protein of unknown function (DUF1462)
JR311_RS15740	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
JR311_RS15745	COG0823	Involved in the tonB-independent uptake of proteins
JR311_RS15745	COG4946	Tricorn protease homolog
JR311_RS15745	COG1506	peptidase
JR311_RS15755	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
JR311_RS15760	COG0460	homoserine dehydrogenase
JR311_RS15765	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JR311_RS15770	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JR311_RS15775	COG0647	UMP catabolic process
JR311_RS15780	COG2445	Protein of unknown function DUF86
JR311_RS15785	COG4470	Protein conserved in bacteria
JR311_RS15795	COG0739	heme binding
JR311_RS15805	COG0737	Belongs to the 5'-nucleotidase family
JR311_RS15810	COG0730	response to heat
JR311_RS15815	COG1801	Protein of unknown function DUF72
JR311_RS15830	COG2508	Transcriptional regulator
JR311_RS15850	COG2814	Major facilitator Superfamily
JR311_RS15855	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JR311_RS15860	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JR311_RS15865	COG2356	endonuclease I
JR311_RS15870	COG3842	ATPase activity
JR311_RS15875	COG2188	Transcriptional regulator
JR311_RS15880	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JR311_RS15885	COG0395	ABC-type sugar transport system, permease component
JR311_RS15890	COG1175	transmembrane transport
JR311_RS15895	COG1653	transport
JR311_RS15900	COG2222	sugar isomerase
JR311_RS15905	COG0789	Transcriptional regulator
JR311_RS15930	COG0322	excinuclease ABC activity
JR311_RS15935	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JR311_RS15940	COG2226	methyltransferase
JR311_RS15950	COG3409	Peptidoglycan-binding domain 1 protein
JR311_RS15955	COG0719	Fe-S assembly protein
JR311_RS15960	COG0822	iron-sulfur transferase activity
JR311_RS15965	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JR311_RS15970	COG0719	Fe-S assembly protein
JR311_RS15975	COG0396	ATPase activity
JR311_RS15985	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JR311_RS15990	COG1464	Belongs to the NlpA lipoprotein family
JR311_RS15995	COG2011	ABC-type metal ion transport system permease component
JR311_RS16000	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JR311_RS16010	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JR311_RS16015	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JR311_RS16030	COG1393	Belongs to the ArsC family
JR311_RS16035	COG1960	acyl-CoA dehydrogenase activity
JR311_RS16040	COG0183	Belongs to the thiolase family
JR311_RS16045	COG1024	Enoyl-CoA hydratase
JR311_RS16045	COG1250	3-hydroxyacyl-CoA dehydrogenase
JR311_RS16060	COG0477	Major facilitator Superfamily
JR311_RS16070	COG5577	PFAM Coat F domain
JR311_RS16075	COG1846	Transcriptional regulator
JR311_RS16080	COG0477	Major facilitator Superfamily
JR311_RS16085	COG0583	DNA-binding transcription factor activity
JR311_RS16105	COG1120	ATPase activity
JR311_RS16120	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS16125	COG0783	Belongs to the Dps family
JR311_RS16130	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JR311_RS16135	COG0745	RESPONSE REGULATOR receiver
JR311_RS16140	COG2770	Histidine kinase
JR311_RS16140	COG2205	protein histidine kinase activity
JR311_RS16150	COG1309	transcriptional regulator
JR311_RS16155	COG0114	fumarate hydratase activity
JR311_RS16165	COG0697	spore germination
JR311_RS16170	COG0814	amino acid
JR311_RS16180	COG2197	response regulator
JR311_RS16185	COG4585	Histidine kinase
JR311_RS16190	COG4758	membrane
JR311_RS16195	COG3595	metallopeptidase activity
JR311_RS16200	COG1842	Phage shock protein A
JR311_RS16205	COG4758	membrane
JR311_RS16210	COG2814	Major facilitator Superfamily
JR311_RS16215	COG2096	Adenosyltransferase
JR311_RS16220	COG1120	ATPase activity
JR311_RS16225	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JR311_RS16230	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JR311_RS16235	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS16240	COG3386	PFAM SMP-30 Gluconolaconase
JR311_RS16245	COG2205	protein histidine kinase activity
JR311_RS16250	COG0745	RESPONSE REGULATOR receiver
JR311_RS16260	COG1191	sigma factor activity
JR311_RS16270	COG2140	Oxalate decarboxylase
JR311_RS16280	COG1120	ATPase activity
JR311_RS16285	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JR311_RS16290	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JR311_RS16295	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JR311_RS16300	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
JR311_RS16305	COG0531	amino acid
JR311_RS16315	COG1988	membrane-bound metal-dependent
JR311_RS16320	COG1368	sulfuric ester hydrolase activity
JR311_RS16325	COG1910	domain protein
JR311_RS16330	COG0725	ABC transporter, periplasmic molybdate-binding protein
JR311_RS16335	COG4149	molybdate abc transporter
JR311_RS16340	COG2197	response regulator
JR311_RS16345	COG3850	Histidine kinase
JR311_RS16350	COG1131	(ABC) transporter
JR311_RS16360	COG0842	Transport permease protein
JR311_RS16365	COG0656	L-ascorbic acid biosynthetic process
JR311_RS16385	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JR311_RS16390	COG3973	AAA domain
JR311_RS16395	COG2860	membrane
JR311_RS16405	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
JR311_RS16410	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JR311_RS16415	COG2217	Heavy metal translocating P-type atpase
JR311_RS16420	COG2217	Heavy metal translocating P-type atpase
JR311_RS16425	COG2608	mercury ion transmembrane transporter activity
JR311_RS16430	COG1937	Protein conserved in bacteria
JR311_RS16435	COG0673	inositol 2-dehydrogenase activity
JR311_RS16445	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JR311_RS16450	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JR311_RS16455	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JR311_RS16460	COG1126	abc transporter atp-binding protein
JR311_RS16465	COG0765	amino acid transport
JR311_RS16470	COG0765	amino acid transport
JR311_RS16475	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JR311_RS16480	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JR311_RS16485	COG0454	-acetyltransferase
JR311_RS16490	COG0583	DNA-binding transcription factor activity
JR311_RS16495	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS16500	COG2732	(Barnase) inhibitor
JR311_RS16520	COG0557	exoribonuclease II activity
JR311_RS16525	COG1647	Serine aminopeptidase, S33
JR311_RS16530	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JR311_RS16535	COG1476	TRANSCRIPTIONal
JR311_RS16540	COG1396	sequence-specific DNA binding
JR311_RS16545	COG1396	sequence-specific DNA binding
JR311_RS16550	COG1733	regulation of RNA biosynthetic process
JR311_RS16575	COG1131	(ABC) transporter
JR311_RS16580	COG1174	glycine betaine transport
JR311_RS16585	COG1732	Glycine betaine
JR311_RS16590	COG1174	glycine betaine transport
JR311_RS16595	COG0517	IMP dehydrogenase activity
JR311_RS16595	COG1125	glycine betaine transport
JR311_RS16600	COG1510	regulation of RNA biosynthetic process
JR311_RS16605	COG1174	glycine betaine transport
JR311_RS16610	COG1732	Glycine betaine
JR311_RS16615	COG1174	glycine betaine transport
JR311_RS16620	COG1125	glycine betaine transport
JR311_RS16620	COG0517	IMP dehydrogenase activity
JR311_RS16625	COG1510	regulation of RNA biosynthetic process
JR311_RS16630	COG2095	MarC family integral membrane protein
JR311_RS16635	COG3064	Membrane
JR311_RS16640	COG4640	response to antibiotic
JR311_RS16645	COG0456	acetyltransferase
JR311_RS16660	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JR311_RS16675	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JR311_RS16680	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JR311_RS16685	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JR311_RS16695	COG2234	aminopeptidase activity
JR311_RS16715	COG0126	phosphoglycerate kinase activity
JR311_RS16725	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JR311_RS16730	COG2390	Transcriptional regulator
JR311_RS16735	COG2814	Major facilitator Superfamily
JR311_RS16740	COG1609	Transcriptional regulator
JR311_RS16745	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JR311_RS16755	COG0583	DNA-binding transcription factor activity
JR311_RS16760	COG0697	spore germination
JR311_RS16765	COG1113	amino acid transport
JR311_RS16775	COG1609	Transcriptional regulator
JR311_RS16785	COG0561	phosphatase activity
JR311_RS16790	COG1737	Transcriptional regulator
JR311_RS16795	COG1070	Carbohydrate kinase
JR311_RS16820	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JR311_RS16825	COG2186	Transcriptional regulator
JR311_RS16830	COG1620	l-lactate permease
JR311_RS16835	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
JR311_RS16845	COG5039	Polysaccharide pyruvyl transferase
JR311_RS16850	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JR311_RS16855	COG0110	maltose O-acetyltransferase activity
JR311_RS16860	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JR311_RS16865	COG2244	polysaccharide biosynthetic process
JR311_RS16870	COG1216	Glycosyl transferase, family 2
JR311_RS16875	COG5039	Polysaccharide pyruvyl transferase
JR311_RS16880	COG1216	Glycosyl transferase, family 2
JR311_RS16890	COG0438	transferase activity, transferring glycosyl groups
JR311_RS16895	COG1215	transferase activity, transferring glycosyl groups
JR311_RS16900	COG0438	transferase activity, transferring glycosyl groups
JR311_RS16905	COG1086	Polysaccharide biosynthesis protein
JR311_RS16910	COG0489	protein tyrosine kinase activity
JR311_RS16915	COG3944	biosynthesis protein
JR311_RS16920	COG1396	sequence-specific DNA binding
JR311_RS16925	COG2272	Belongs to the type-B carboxylesterase lipase family
JR311_RS16935	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JR311_RS16940	COG2364	Membrane
JR311_RS16945	COG0456	acetyltransferase
JR311_RS16950	COG3479	Phenolic acid decarboxylase
JR311_RS17020	COG2223	nitrite transmembrane transporter activity
JR311_RS17025	COG1609	Transcriptional regulator
JR311_RS17035	COG0583	DNA-binding transcription factor activity
JR311_RS17040	COG2828	Protein conserved in bacteria
JR311_RS17045	COG0477	Major facilitator Superfamily
JR311_RS17045	COG2814	Major facilitator Superfamily
JR311_RS17050	COG1611	Belongs to the LOG family
JR311_RS17055	COG1694	Mazg nucleotide pyrophosphohydrolase
JR311_RS17060	COG0659	secondary active sulfate transmembrane transporter activity
JR311_RS17065	COG0288	reversible hydration of carbon dioxide
JR311_RS17070	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JR311_RS17075	COG4290	ribonuclease
JR311_RS17080	COG2162	N-hydroxyarylamine O-acetyltransferase activity
JR311_RS17085	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JR311_RS17095	COG0391	Required for morphogenesis under gluconeogenic growth conditions
JR311_RS17105	COG1051	belongs to the nudix hydrolase family
JR311_RS17110	COG0492	ferredoxin-NADP+ reductase activity
JR311_RS17115	COG3883	PFAM NLP P60 protein
JR311_RS17115	COG0791	NLP P60 protein
JR311_RS17120	COG0457	Tetratricopeptide repeat
JR311_RS17125	COG5002	protein histidine kinase activity
JR311_RS17130	COG0745	RESPONSE REGULATOR receiver
JR311_RS17140	COG1132	(ABC) transporter
JR311_RS17145	COG0140	phosphoribosyl-ATP diphosphatase activity
JR311_RS17145	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JR311_RS17170	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JR311_RS17185	COG4990	cell redox homeostasis
JR311_RS17190	COG0110	maltose O-acetyltransferase activity
JR311_RS17210	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JR311_RS17220	COG2188	Transcriptional regulator
JR311_RS17225	COG1309	transcriptional regulator
JR311_RS17230	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
JR311_RS17235	COG1950	PFAM Membrane protein of
JR311_RS17240	COG1983	PspC domain protein
JR311_RS17245	COG3595	metallopeptidase activity
JR311_RS17260	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JR311_RS17270	COG4897	Protein conserved in bacteria
JR311_RS17275	COG3848	Pyruvate phosphate dikinase
JR311_RS17275	COG0574	Belongs to the PEP-utilizing enzyme family
JR311_RS17280	COG1309	transcriptional regulator
JR311_RS17285	COG2814	Major facilitator Superfamily
JR311_RS17300	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JR311_RS17310	COG3409	Peptidoglycan-binding domain 1 protein
JR311_RS17310	COG0793	Belongs to the peptidase S41A family
JR311_RS17315	COG3420	alginic acid biosynthetic process
JR311_RS17320	COG2177	Part of the ABC transporter FtsEX involved in
JR311_RS17325	COG2884	Cell division ATP-binding protein ftsE
JR311_RS17330	COG2010	Cytochrome c
JR311_RS17335	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JR311_RS17350	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JR311_RS17365	COG1516	flagellar protein fliS
JR311_RS17370	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
JR311_RS17375	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JR311_RS17395	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JR311_RS17400	COG1256	bacterial-type flagellum assembly
JR311_RS17400	COG4786	Flagellar basal body rod
JR311_RS17405	COG3418	PFAM FlgN family protein
JR311_RS17410	COG2747	anti-sigma28 factor FlgM
JR311_RS17420	COG1040	competence protein
JR311_RS17430	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
JR311_RS17435	COG1307	EDD domain protein, DegV family
JR311_RS17440	COG2197	response regulator
JR311_RS17445	COG4585	Histidine kinase
JR311_RS17450	COG1739	Uncharacterized protein family UPF0029
JR311_RS17455	COG1316	TRANSCRIPTIONal
JR311_RS17460	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JR311_RS17465	COG0438	transferase activity, transferring glycosyl groups
JR311_RS17470	COG1215	transferase activity, transferring glycosyl groups
JR311_RS17475	COG3206	protein involved in exopolysaccharide biosynthesis
JR311_RS17480	COG3307	-O-antigen
JR311_RS17485	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
JR311_RS17490	COG0297	glycogen (starch) synthase activity
JR311_RS17490	COG0438	transferase activity, transferring glycosyl groups
JR311_RS17495	COG2244	polysaccharide biosynthetic process
JR311_RS17505	COG0860	N-Acetylmuramoyl-L-alanine amidase
JR311_RS17505	COG2247	cell wall binding repeat
JR311_RS17510	COG2385	sporulation resulting in formation of a cellular spore
JR311_RS17510	COG2247	cell wall binding repeat
JR311_RS17520	COG1316	TRANSCRIPTIONal
JR311_RS17525	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
JR311_RS17530	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JR311_RS17535	COG1134	teichoic acid transport
JR311_RS17540	COG1682	transport, permease protein
JR311_RS17545	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JR311_RS17550	COG0438	transferase activity, transferring glycosyl groups
JR311_RS17555	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
JR311_RS17560	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
JR311_RS17565	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JR311_RS17570	COG4193	domain, Protein
JR311_RS17575	COG1482	cell wall glycoprotein biosynthetic process
JR311_RS17580	COG0697	spore germination
JR311_RS17585	COG0814	amino acid
JR311_RS17595	COG1215	transferase activity, transferring glycosyl groups
JR311_RS17600	COG2814	Major facilitator Superfamily
JR311_RS17605	COG1316	TRANSCRIPTIONal
JR311_RS17610	COG0561	phosphatase activity
JR311_RS17615	COG2433	Pfam Transposase IS66
JR311_RS17620	COG0791	NLP P60 protein
JR311_RS17630	COG2843	Capsule synthesis protein
JR311_RS17640	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JR311_RS17645	COG0697	spore germination
JR311_RS17650	COG0814	amino acid
JR311_RS17660	COG1609	Transcriptional regulator
JR311_RS17665	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JR311_RS17675	COG1129	ABC transporter
JR311_RS17680	COG1172	Belongs to the binding-protein-dependent transport system permease family
JR311_RS17685	COG1879	ABC-type sugar transport system periplasmic component
JR311_RS17690	COG3103	Sh3 type 3 domain protein
JR311_RS17695	COG2249	NAD(P)H dehydrogenase (quinone) activity
JR311_RS17700	COG3527	Alpha-acetolactate decarboxylase
JR311_RS17705	COG0028	Belongs to the TPP enzyme family
JR311_RS17710	COG0583	DNA-binding transcription factor activity
JR311_RS17715	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JR311_RS17730	COG5337	Spore coat protein CotH
JR311_RS17740	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JR311_RS17750	COG0405	Gamma-glutamyltransferase
JR311_RS17755	COG1522	sequence-specific DNA binding
JR311_RS17760	COG2059	Chromate
JR311_RS17765	COG2059	Chromate
JR311_RS17775	COG0655	NAD(P)H dehydrogenase (quinone) activity
JR311_RS17780	COG0583	DNA-binding transcription factor activity
JR311_RS17805	COG5444	nuclease activity
JR311_RS17820	COG3878	Protein conserved in bacteria
JR311_RS17825	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
JR311_RS17830	COG4464	protein tyrosine phosphatase activity
JR311_RS17835	COG0489	protein tyrosine kinase activity
JR311_RS17840	COG3944	biosynthesis protein
JR311_RS17850	COG4715	Zinc finger, swim domain protein
JR311_RS17855	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JR311_RS17860	COG0561	phosphatase activity
JR311_RS17865	COG1349	DNA-binding transcription factor activity
JR311_RS17870	COG0629	single-stranded DNA binding
JR311_RS17895	COG0457	Tetratricopeptide repeat
JR311_RS17900	COG4786	Flagellar basal body rod
JR311_RS17905	COG4786	Flagellar basal body rod
JR311_RS17910	COG1077	Cell shape determining protein MreB Mrl
JR311_RS17915	COG1609	Transcriptional regulator
JR311_RS17920	COG1846	Transcriptional regulator
JR311_RS17925	COG2814	Major facilitator Superfamily
JR311_RS17930	COG1953	Uracil, thiamine, allantoin
JR311_RS17935	COG0477	Major facilitator Superfamily
JR311_RS17940	COG1335	isochorismatase
JR311_RS17945	COG0004	ammonium transporteR
JR311_RS17950	COG0347	Belongs to the P(II) protein family
JR311_RS17955	COG0772	Belongs to the SEDS family
JR311_RS17960	COG0671	phosphoesterase, PA-phosphatase related
JR311_RS17970	COG0739	heme binding
JR311_RS17975	COG1247	-acetyltransferase
JR311_RS17990	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JR311_RS18000	COG0726	polysaccharide deacetylase
JR311_RS18010	COG1959	2 iron, 2 sulfur cluster binding
JR311_RS18025	COG0831	urea catabolic process
JR311_RS18030	COG3237	CsbD-like
JR311_RS18035	COG1994	Peptidase M50
JR311_RS18040	COG0457	Tetratricopeptide repeat
JR311_RS18050	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
JR311_RS18060	COG2304	oxidoreductase activity
JR311_RS18065	COG2304	oxidoreductase activity
JR311_RS18070	COG2385	sporulation resulting in formation of a cellular spore
JR311_RS18075	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JR311_RS18085	COG4836	Membrane
JR311_RS18155	COG0698	ribose 5-phosphate isomerase
JR311_RS18160	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JR311_RS18170	COG0009	L-threonylcarbamoyladenylate synthase
JR311_RS18175	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
JR311_RS18195	COG2890	protein-(glutamine-N5) methyltransferase activity
JR311_RS18200	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JR311_RS18205	COG0346	lactoylglutathione lyase activity
JR311_RS18210	COG0789	Transcriptional regulator
JR311_RS18215	COG0679	Auxin Efflux Carrier
JR311_RS18220	COG0281	malic enzyme
JR311_RS18235	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JR311_RS18240	COG1494	fructose-1,6-bisphosphatase
JR311_RS18245	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JR311_RS18255	COG0191	fructose-bisphosphate aldolase activity
JR311_RS18260	COG2204	response regulator
JR311_RS18265	COG4821	SIS domain
JR311_RS18280	COG2181	nitrate reductase activity
JR311_RS18280	COG0247	lactate metabolic process
JR311_RS18285	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JR311_RS18300	COG1132	(ABC) transporter
JR311_RS18305	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JR311_RS18315	COG2181	nitrate reductase activity
JR311_RS18320	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JR311_RS18325	COG1140	nitrate reductase beta subunit
JR311_RS18330	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JR311_RS18335	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JR311_RS18345	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JR311_RS18350	COG2223	nitrite transmembrane transporter activity
JR311_RS18360	COG4506	Protein conserved in bacteria
JR311_RS18370	COG3391	amine dehydrogenase activity
JR311_RS18375	COG3391	amine dehydrogenase activity
JR311_RS18380	COG0457	Tetratricopeptide repeat
JR311_RS18420	COG0010	Belongs to the arginase family
JR311_RS18425	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
JR311_RS18430	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JR311_RS18445	COG1994	Peptidase M50
JR311_RS18450	COG1942	4-Oxalocrotonate Tautomerase
JR311_RS18455	COG1846	Transcriptional regulator
JR311_RS18460	COG0531	amino acid
JR311_RS18465	COG3465	dGTPase activity
JR311_RS18470	COG1078	dGTPase activity
JR311_RS18485	COG1695	Transcriptional regulator
JR311_RS18495	COG1131	(ABC) transporter
JR311_RS18500	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JR311_RS18530	COG0583	DNA-binding transcription factor activity
JR311_RS18540	COG0280	phosphate acetyltransferase
JR311_RS18570	COG3118	belongs to the thioredoxin family
JR311_RS18575	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS18580	COG0436	Aminotransferase
JR311_RS18610	COG2814	Major facilitator Superfamily
JR311_RS18615	COG2814	Major facilitator Superfamily
JR311_RS18620	COG0833	amino acid
JR311_RS18625	COG4187	Peptidase family M20/M25/M40
JR311_RS18630	COG1012	belongs to the aldehyde dehydrogenase family
JR311_RS18635	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JR311_RS18645	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
JR311_RS18650	COG1091	dTDP-4-dehydrorhamnose reductase activity
JR311_RS18655	COG1088	dTDP-glucose 4,6-dehydratase activity
JR311_RS18660	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JR311_RS18665	COG3980	spore coat polysaccharide biosynthesis protein
JR311_RS18670	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
JR311_RS18675	COG2089	acid synthase
JR311_RS18680	COG0456	acetyltransferase
JR311_RS18685	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JR311_RS18690	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JR311_RS18695	COG0463	Glycosyl transferase, family 2
JR311_RS18705	COG2363	Small membrane protein
JR311_RS18710	COG2233	PERMEase
JR311_RS18725	COG1216	Glycosyl transferase, family 2
JR311_RS18740	COG1695	Transcriptional regulator
JR311_RS18745	COG0351	phosphomethylpyrimidine kinase
JR311_RS18755	COG1621	beta-fructofuranosidase activity
JR311_RS18760	COG1263	PTS System
JR311_RS18760	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JR311_RS18765	COG3711	transcriptional antiterminator
JR311_RS18775	COG1404	Belongs to the peptidase S8 family
JR311_RS18780	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JR311_RS18785	COG0778	Nitroreductase
JR311_RS18790	COG0772	Belongs to the SEDS family
JR311_RS18815	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JR311_RS18820	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JR311_RS18825	COG2261	transglycosylase associated protein
JR311_RS18830	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
JR311_RS18835	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JR311_RS18840	COG2246	polysaccharide biosynthetic process
JR311_RS18845	COG1309	transcriptional regulator
JR311_RS18865	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
JR311_RS18870	COG2837	iron assimilation
JR311_RS18875	COG2822	iron ion transport
JR311_RS18890	COG0583	DNA-binding transcription factor activity
JR311_RS18900	COG1346	cytolysis
JR311_RS18905	COG4895	conserved protein (DUF2196)
JR311_RS18910	COG0789	Transcriptional regulator
JR311_RS18915	COG5504	Zn-dependent protease
JR311_RS18920	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JR311_RS18925	COG0346	lactoylglutathione lyase activity
JR311_RS18930	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JR311_RS18935	COG1404	Belongs to the peptidase S8 family
JR311_RS18940	COG1442	glycosyl transferase family 8
JR311_RS18945	COG2357	RelA SpoT domain protein
JR311_RS18950	COG1575	Belongs to the MenA family. Type 1 subfamily
JR311_RS18965	COG1696	Membrane protein involved in D-alanine export
JR311_RS18975	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
JR311_RS18980	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JR311_RS18985	COG1486	melibiose metabolic process
JR311_RS18990	COG1447	Phosphotransferase system cellobiose-specific component IIA
JR311_RS18995	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JR311_RS19000	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JR311_RS19005	COG3711	transcriptional antiterminator
JR311_RS19005	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JR311_RS19015	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JR311_RS19020	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JR311_RS19030	COG0640	Transcriptional regulator
JR311_RS19035	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JR311_RS19040	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JR311_RS19045	COG1447	Phosphotransferase system cellobiose-specific component IIA
JR311_RS19050	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JR311_RS19055	COG2723	6-phospho-beta-galactosidase activity
JR311_RS19060	COG1940	carbohydrate kinase activity
JR311_RS19065	COG1482	cell wall glycoprotein biosynthetic process
JR311_RS19075	COG0753	catalase activity
JR311_RS19080	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
JR311_RS19085	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JR311_RS19090	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
JR311_RS19095	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
JR311_RS19100	COG4988	ABC transporter
JR311_RS19105	COG1294	oxidase, subunit
JR311_RS19110	COG1271	oxidase subunit
JR311_RS19115	COG3493	citrate carrier protein
JR311_RS19120	COG0726	polysaccharide deacetylase
JR311_RS19125	COG3842	ATPase activity
JR311_RS19130	COG2508	Transcriptional regulator
JR311_RS19135	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JR311_RS19145	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JR311_RS19160	COG4894	glucomannan catabolic process
JR311_RS19165	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JR311_RS19170	COG0500	methyltransferase
JR311_RS19175	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JR311_RS19190	COG0693	protein deglycase activity
JR311_RS19190	COG0753	catalase activity
JR311_RS19195	COG2851	Citrate transporter
JR311_RS19200	COG2273	Hydrolase Family 16
JR311_RS19205	COG3711	transcriptional antiterminator
JR311_RS19210	COG2270	Major facilitator Superfamily
JR311_RS19215	COG0513	Belongs to the DEAD box helicase family
JR311_RS19260	COG0697	spore germination
JR311_RS19265	COG0589	response to stress
JR311_RS19325	COG3507	Belongs to the glycosyl hydrolase 43 family
JR311_RS19350	COG0010	Belongs to the arginase family
JR311_RS19355	COG0833	amino acid
JR311_RS19360	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
JR311_RS19365	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JR311_RS19375	COG2390	Transcriptional regulator
JR311_RS19380	COG0561	phosphatase activity
JR311_RS19410	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JR311_RS19415	COG5294	Protein conserved in bacteria
JR311_RS19420	COG0577	efflux transmembrane transporter activity
JR311_RS19425	COG1136	(ABC) transporter
JR311_RS19430	COG2205	protein histidine kinase activity
JR311_RS19435	COG0745	RESPONSE REGULATOR receiver
JR311_RS19450	COG1082	Xylose isomerase domain protein TIM barrel
JR311_RS19460	COG2814	Major facilitator Superfamily
JR311_RS19490	COG1349	DNA-binding transcription factor activity
JR311_RS19495	COG0667	Aldo Keto reductase
JR311_RS19500	COG2814	Major facilitator Superfamily
JR311_RS19510	COG1028	Short-chain dehydrogenase reductase Sdr
JR311_RS19515	COG2197	response regulator
JR311_RS19520	COG4585	Histidine kinase
JR311_RS19525	COG3239	Fatty acid desaturase
JR311_RS19530	COG1309	transcriptional regulator
JR311_RS19535	COG1012	belongs to the aldehyde dehydrogenase family
JR311_RS19540	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JR311_RS19550	COG0640	Transcriptional regulator
JR311_RS19555	COG2814	Major facilitator Superfamily
JR311_RS19560	COG1714	RDD family
JR311_RS19570	COG0450	alkyl hydroperoxide reductase
JR311_RS19575	COG3634	alkyl hydroperoxide reductase activity
JR311_RS19580	COG3177	Filamentation induced by cAMP protein fic
JR311_RS19585	COG1113	amino acid transport
JR311_RS19595	COG2080	2 iron, 2 sulfur cluster binding
JR311_RS19610	COG2068	MobA-Related Protein
JR311_RS19615	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
JR311_RS19840	COG0776	regulation of translation
JR311_RS19895	COG4373	Mu-like prophage FluMu protein gp28
JR311_RS20015	COG5632	N-Acetylmuramoyl-L-alanine amidase
JR311_RS20015	COG3409	Peptidoglycan-binding domain 1 protein
JR311_RS20065	COG0457	Tetratricopeptide repeat
JR311_RS20135	COG2404	hydrolase activity, acting on ester bonds
JR311_RS20155	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JR311_RS20165	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JR311_RS20170	COG1780	Probably involved in ribonucleotide reductase function
JR311_RS20175	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JR311_RS20210	COG4112	unkown
JR311_RS20230	COG0587	DNA-directed DNA polymerase activity
JR311_RS20280	COG1435	thymidine kinase activity
JR311_RS20385	COG3584	3D domain protein
JR311_RS20385	COG1388	LysM domain