CUB85_RS00005	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CUB85_RS00010	SM00480	DNA polymerase III beta subunit
CUB85_RS00030	SM00387	Histidine kinase-like ATPases
CUB85_RS00030	SM00433	TopoisomeraseII
CUB85_RS00035	SM00434	DNA Topoisomerase IV
CUB85_RS00070	SM00116	Domain in cystathionine beta-synthase and other proteins.
CUB85_RS00070	SM01240	CUB85_RS00070
CUB85_RS00075	SM00936	Penicillin-binding protein 5, C-terminal domain 
CUB85_RS00115	SM00257	Lysin motif
CUB85_RS00115	SM00636	CUB85_RS00115
CUB85_RS00135	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS00145	SM00493	CUB85_RS00145
CUB85_RS00240	SM00465	GIY-YIG type nucleases (URI domain)
CUB85_RS00250	SM00966	SpoVT / AbrB like domain 
CUB85_RS00265	SM01208	CUB85_RS00265
CUB85_RS00270	SM00493	CUB85_RS00270
CUB85_RS00275	SM00650	Ribosomal RNA adenine dimethylases
CUB85_RS00320	SM01400	CUB85_RS00320
CUB85_RS00340	SM00487	DEAD-like helicases superfamily
CUB85_RS00340	SM00490	helicase superfamily c-terminal domain
CUB85_RS00340	SM00982	CUB85_RS00340
CUB85_RS00340	SM01058	CarD-like/TRCF domain
CUB85_RS00345	SM00966	SpoVT / AbrB like domain 
CUB85_RS00360	SM00363	S4 RNA-binding domain
CUB85_RS00380	SM00316	Ribosomal protein S1-like RNA-binding domain
CUB85_RS00395	SM00331	Sigma factor PP2C-like phosphatases
CUB85_RS00395	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CUB85_RS00405	SM00220	Serine/Threonine protein kinases, catalytic domain
CUB85_RS00410	SM00977	TilS substrate C-terminal domain
CUB85_RS00420	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS00465	SM00905	Dihydroneopterin aldolase
CUB85_RS00475	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS00585	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS00585	SM01086	C-terminal, D2-small domain, of ClpB protein
CUB85_RS00590	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS00600	SM00670	Large family of predicted nucleotide-binding domains
CUB85_RS00625	SM00840	CUB85_RS00625
CUB85_RS00630	SM00535	Ribonuclease III family
CUB85_RS00635	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CUB85_RS00660	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CUB85_RS00660	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CUB85_RS00665	SM00649	Ribosomal protein L11/L12
CUB85_RS00695	SM00663	RNA polymerase I subunit A N-terminus
CUB85_RS00715	SM00838	Elongation factor G C-terminus
CUB85_RS00715	SM00889	Elongation factor G, domain IV
CUB85_RS00730	SM01403	CUB85_RS00730
CUB85_RS00750	SM01382	CUB85_RS00750
CUB85_RS00750	SM01383	CUB85_RS00750
CUB85_RS00765	SM00322	K homology RNA-binding domain
CUB85_RS00785	SM01374	CUB85_RS00785
CUB85_RS00790	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CUB85_RS00855	SM00316	Ribosomal protein S1-like RNA-binding domain
CUB85_RS00875	SM00662	RNA polymerases D
CUB85_RS00885	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS00890	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS00930	SM00646	CUB85_RS00930
CUB85_RS00945	SM01251	CUB85_RS00945
CUB85_RS00995	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS01000	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS01010	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS01145	SM00470	ParB-like nuclease domain
CUB85_RS01155	SM00954	Region found in RelA / SpoT proteins
CUB85_RS01260	SM00257	Lysin motif
CUB85_RS01325	SM00257	Lysin motif
CUB85_RS01325	SM00644	CUB85_RS01325
CUB85_RS01340	SM00860	SMI1 / KNR4 family
CUB85_RS01355	SM00028	Tetratricopeptide repeats
CUB85_RS01420	SM00829	Enoylreductase
CUB85_RS01455	SM00342	helix_turn_helix, arabinose operon control protein
CUB85_RS01560	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS01595	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS01615	SM00421	helix_turn_helix, Lux Regulon
CUB85_RS01615	SM00448	cheY-homologous receiver domain
CUB85_RS01620	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS01715	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS01750	SM00450	Rhodanese Homology Domain
CUB85_RS01785	SM00387	Histidine kinase-like ATPases
CUB85_RS01790	SM00448	cheY-homologous receiver domain
CUB85_RS01890	SM00870	CUB85_RS01890
CUB85_RS01930	SM00028	Tetratricopeptide repeats
CUB85_RS01940	SM00642	Alpha-amylase domain
CUB85_RS01950	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS02000	SM00116	Domain in cystathionine beta-synthase and other proteins.
CUB85_RS02000	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS02030	SM00632	CUB85_RS02030
CUB85_RS02030	SM00642	Alpha-amylase domain
CUB85_RS02045	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS02150	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CUB85_RS02165	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CUB85_RS02205	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CUB85_RS02220	SM00823	Phosphopantetheine attachment site
CUB85_RS02225	SM00823	Phosphopantetheine attachment site
CUB85_RS02230	SM00823	Phosphopantetheine attachment site
CUB85_RS02255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS02270	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS02280	SM00062	Bacterial periplasmic substrate-binding proteins
CUB85_RS02320	SM00710	Parallel beta-helix repeats
CUB85_RS02320	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
CUB85_RS02355	SM00062	Bacterial periplasmic substrate-binding proteins
CUB85_RS02365	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS02380	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS02390	SM00448	cheY-homologous receiver domain
CUB85_RS02390	SM00862	Transcriptional regulatory protein, C terminal
CUB85_RS02395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CUB85_RS02395	SM00387	Histidine kinase-like ATPases
CUB85_RS02395	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS02400	SM00028	Tetratricopeptide repeats
CUB85_RS02430	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS02460	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CUB85_RS02465	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS02500	SM00420	helix_turn_helix, Deoxyribose operon repressor
CUB85_RS02555	SM00796	Allophanate hydrolase subunit 1
CUB85_RS02560	SM00797	Allophanate hydrolase subunit 2
CUB85_RS02565	SM00346	helix_turn_helix isocitrate lyase regulation
CUB85_RS02635	SM00344	helix_turn_helix ASNC type
CUB85_RS02640	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CUB85_RS02640	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CUB85_RS02640	SM00493	CUB85_RS02640
CUB85_RS02650	SM00267	diguanylate cyclase
CUB85_RS02705	SM00028	Tetratricopeptide repeats
CUB85_RS02795	SM00091	PAS domain
CUB85_RS02795	SM00387	Histidine kinase-like ATPases
CUB85_RS02800	SM00448	cheY-homologous receiver domain
CUB85_RS02815	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS02865	SM00487	DEAD-like helicases superfamily
CUB85_RS02865	SM00490	helicase superfamily c-terminal domain
CUB85_RS02895	SM01005	Alanine racemase, C-terminal domain
CUB85_RS02920	SM00387	Histidine kinase-like ATPases
CUB85_RS02925	SM00331	Sigma factor PP2C-like phosphatases
CUB85_RS02945	SM00331	Sigma factor PP2C-like phosphatases
CUB85_RS02945	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CUB85_RS02950	SM00316	Ribosomal protein S1-like RNA-binding domain
CUB85_RS02950	SM00732	Likely ribonuclease with RNase H fold.
CUB85_RS02960	SM00731	SprT homologues.
CUB85_RS03010	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS03125	SM00448	cheY-homologous receiver domain
CUB85_RS03125	SM00862	Transcriptional regulatory protein, C terminal
CUB85_RS03130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CUB85_RS03130	SM00387	Histidine kinase-like ATPases
CUB85_RS03130	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS03140	SM00028	Tetratricopeptide repeats
CUB85_RS03185	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS03230	SM00829	Enoylreductase
CUB85_RS03235	SM00829	Enoylreductase
CUB85_RS03250	SM00357	Cold shock protein domain
CUB85_RS03255	SM01058	CarD-like/TRCF domain
CUB85_RS03270	SM00450	Rhodanese Homology Domain
CUB85_RS03275	SM00450	Rhodanese Homology Domain
CUB85_RS03280	SM00450	Rhodanese Homology Domain
CUB85_RS03280	SM00849	Metallo-beta-lactamase superfamily
CUB85_RS03370	SM01130	CUB85_RS03370
CUB85_RS03395	SM00829	Enoylreductase
CUB85_RS03410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS03440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS03475	SM00387	Histidine kinase-like ATPases
CUB85_RS03480	SM00421	helix_turn_helix, Lux Regulon
CUB85_RS03480	SM00448	cheY-homologous receiver domain
CUB85_RS03495	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS03520	SM00825	Beta-ketoacyl synthase
CUB85_RS03525	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS03540	SM00422	helix_turn_helix, mercury resistance
CUB85_RS03565	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS03565	SM00895	CUB85_RS03565
CUB85_RS03600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS03600	SM00866	CUB85_RS03600
CUB85_RS03605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS03605	SM00895	CUB85_RS03605
CUB85_RS03645	SM00829	Enoylreductase
CUB85_RS03715	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS03725	SM00881	CoA binding domain
CUB85_RS03750	SM00883	Chaperonin 10 Kd subunit
CUB85_RS03775	SM00028	Tetratricopeptide repeats
CUB85_RS03775	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS03780	SM00829	Enoylreductase
CUB85_RS03835	SM00829	Enoylreductase
CUB85_RS03880	SM00460	Transglutaminase/protease-like homologues
CUB85_RS03925	SM01001	AIR carboxylase
CUB85_RS03935	SM00998	Adenylosuccinate lyase C-terminus
CUB85_RS03950	SM01211	CUB85_RS03950
CUB85_RS03975	SM00798	AICARFT/IMPCHase bienzyme
CUB85_RS03975	SM00851	MGS-like domain
CUB85_RS03980	SM01209	CUB85_RS03980
CUB85_RS03980	SM01210	CUB85_RS03980
CUB85_RS04025	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CUB85_RS04025	SM00292	breast cancer carboxy-terminal domain
CUB85_RS04025	SM00532	Ligase N family
CUB85_RS04060	SM00845	GatB domain
CUB85_RS04075	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CUB85_RS04090	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS04210	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS04240	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS04335	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CUB85_RS04350	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS04355	SM00422	helix_turn_helix, mercury resistance
CUB85_RS04365	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS04370	SM00487	DEAD-like helicases superfamily
CUB85_RS04370	SM00490	helicase superfamily c-terminal domain
CUB85_RS04380	SM00829	Enoylreductase
CUB85_RS04395	SM00656	CUB85_RS04395
CUB85_RS04420	SM00387	Histidine kinase-like ATPases
CUB85_RS04420	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS04420	SM00448	cheY-homologous receiver domain
CUB85_RS04425	SM00448	cheY-homologous receiver domain
CUB85_RS04425	SM00862	Transcriptional regulatory protein, C terminal
CUB85_RS04445	SM00091	PAS domain
CUB85_RS04445	SM00387	Histidine kinase-like ATPases
CUB85_RS04450	SM00448	cheY-homologous receiver domain
CUB85_RS04465	SM00849	Metallo-beta-lactamase superfamily
CUB85_RS04545	SM00642	Alpha-amylase domain
CUB85_RS04550	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS04550	SM00866	CUB85_RS04550
CUB85_RS04580	SM00354	helix_turn _helix lactose operon repressor
CUB85_RS04605	SM00226	Low molecular weight phosphatase family
CUB85_RS04670	SM00478	endonuclease III
CUB85_RS04705	SM00861	Transketolase, pyrimidine binding domain
CUB85_RS04720	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS04750	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS04755	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS04815	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS04885	SM00287	Bacterial SH3 domain homologues
CUB85_RS04915	SM00478	endonuclease III
CUB85_RS04915	SM00525	CUB85_RS04915
CUB85_RS04945	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS05115	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS05120	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS05125	SM01060	CUB85_RS05125
CUB85_RS05135	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS05140	SM00062	Bacterial periplasmic substrate-binding proteins
CUB85_RS05165	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS05180	SM00567	E-Z type HEAT repeats
CUB85_RS05215	SM00763	PrkA AAA domain
CUB85_RS05230	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS05260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS05265	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS05270	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS05280	SM00357	Cold shock protein domain
CUB85_RS05295	SM00267	diguanylate cyclase
CUB85_RS05345	SM00116	Domain in cystathionine beta-synthase and other proteins.
CUB85_RS05395	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CUB85_RS05395	SM00387	Histidine kinase-like ATPases
CUB85_RS05400	SM00421	helix_turn_helix, Lux Regulon
CUB85_RS05400	SM00448	cheY-homologous receiver domain
CUB85_RS05420	SM00257	Lysin motif
CUB85_RS05440	SM00098	Alkaline phosphatase homologues
CUB85_RS05445	SM00257	Lysin motif
CUB85_RS05490	SM00563	Phosphate acyltransferases
CUB85_RS05495	SM01091	Transporter associated domain
CUB85_RS05500	SM00422	helix_turn_helix, mercury resistance
CUB85_RS05510	SM00825	Beta-ketoacyl synthase
CUB85_RS05515	SM01091	Transporter associated domain
CUB85_RS05575	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS05580	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS05640	SM00729	Elongator protein 3, MiaB family, Radical SAM
CUB85_RS05675	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS05695	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CUB85_RS05745	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS05775	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS05860	SM00849	Metallo-beta-lactamase superfamily
CUB85_RS05905	SM00855	Phosphoglycerate mutase family
CUB85_RS05925	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CUB85_RS05940	SM00914	CUB85_RS05940
CUB85_RS05970	SM00894	Excalibur calcium-binding domain
CUB85_RS06010	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS06135	SM00342	helix_turn_helix, arabinose operon control protein
CUB85_RS06150	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS06175	SM00316	Ribosomal protein S1-like RNA-binding domain
CUB85_RS06185	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CUB85_RS06185	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CUB85_RS06250	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CUB85_RS06270	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CUB85_RS06275	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CUB85_RS06330	SM00825	Beta-ketoacyl synthase
CUB85_RS06340	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS06345	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS06390	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS06395	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS06455	SM01118	CUB85_RS06455
CUB85_RS06465	SM00954	Region found in RelA / SpoT proteins
CUB85_RS06595	SM00849	Metallo-beta-lactamase superfamily
CUB85_RS06605	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS06610	SM00966	SpoVT / AbrB like domain 
CUB85_RS06710	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS06750	SM00420	helix_turn_helix, Deoxyribose operon repressor
CUB85_RS06750	SM01134	CUB85_RS06750
CUB85_RS06765	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS06800	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CUB85_RS06800	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CUB85_RS06835	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS06870	SM00354	helix_turn _helix lactose operon repressor
CUB85_RS06880	SM00858	CUB85_RS06880
CUB85_RS06895	SM00028	Tetratricopeptide repeats
CUB85_RS06905	SM00257	Lysin motif
CUB85_RS06905	SM00644	CUB85_RS06905
CUB85_RS06930	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS06945	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS07045	SM00257	Lysin motif
CUB85_RS07110	SM00257	Lysin motif
CUB85_RS07110	SM00644	CUB85_RS07110
CUB85_RS07155	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CUB85_RS07180	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS07195	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CUB85_RS07205	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS07245	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CUB85_RS07260	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS07280	SM00028	Tetratricopeptide repeats
CUB85_RS07295	SM00100	Cyclic nucleotide-monophosphate binding domain
CUB85_RS07320	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS07330	SM00257	Lysin motif
CUB85_RS07330	SM00636	CUB85_RS07330
CUB85_RS07345	SM00116	Domain in cystathionine beta-synthase and other proteins.
CUB85_RS07345	SM00924	MgtE intracellular N domain
CUB85_RS07350	SM00422	helix_turn_helix, mercury resistance
CUB85_RS07365	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS07380	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
CUB85_RS07440	SM00091	PAS domain
CUB85_RS07440	SM00387	Histidine kinase-like ATPases
CUB85_RS07440	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS07480	SM01007	Class II Aldolase and Adducin N-terminal domain
CUB85_RS07495	SM00387	Histidine kinase-like ATPases
CUB85_RS07495	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS07500	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS07515	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS07515	SM01086	C-terminal, D2-small domain, of ClpB protein
CUB85_RS07560	SM00822	CUB85_RS07560
CUB85_RS07570	SM00257	Lysin motif
CUB85_RS07575	SM00257	Lysin motif
CUB85_RS07580	SM00636	CUB85_RS07580
CUB85_RS07630	SM00354	helix_turn _helix lactose operon repressor
CUB85_RS07635	SM01061	CAT RNA binding domain
CUB85_RS07665	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CUB85_RS07665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CUB85_RS07685	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CUB85_RS07685	SM00091	PAS domain
CUB85_RS07685	SM00387	Histidine kinase-like ATPases
CUB85_RS07685	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS07705	SM00260	Two component signalling adaptor domain
CUB85_RS07705	SM00448	cheY-homologous receiver domain
CUB85_RS07720	SM00257	Lysin motif
CUB85_RS07740	SM00052	Putative diguanylate phosphodiesterase
CUB85_RS07830	SM00852	Probable molybdopterin binding domain
CUB85_RS07860	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS07870	SM00420	helix_turn_helix, Deoxyribose operon repressor
CUB85_RS07870	SM01134	CUB85_RS07870
CUB85_RS07895	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS07925	SM00966	SpoVT / AbrB like domain 
CUB85_RS07930	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CUB85_RS07930	SM00091	PAS domain
CUB85_RS07930	SM00387	Histidine kinase-like ATPases
CUB85_RS07930	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS07950	SM00849	Metallo-beta-lactamase superfamily
CUB85_RS07985	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CUB85_RS07990	SM00822	CUB85_RS07990
CUB85_RS07990	SM00823	Phosphopantetheine attachment site
CUB85_RS07990	SM00825	Beta-ketoacyl synthase
CUB85_RS07990	SM00826	CUB85_RS07990
CUB85_RS07990	SM01294	CUB85_RS07990
CUB85_RS07995	SM00822	CUB85_RS07995
CUB85_RS07995	SM00823	Phosphopantetheine attachment site
CUB85_RS07995	SM00825	Beta-ketoacyl synthase
CUB85_RS07995	SM00826	CUB85_RS07995
CUB85_RS08000	SM00822	CUB85_RS08000
CUB85_RS08000	SM00823	Phosphopantetheine attachment site
CUB85_RS08000	SM00825	Beta-ketoacyl synthase
CUB85_RS08000	SM01294	CUB85_RS08000
CUB85_RS08005	SM00822	CUB85_RS08005
CUB85_RS08005	SM00823	Phosphopantetheine attachment site
CUB85_RS08005	SM00825	Beta-ketoacyl synthase
CUB85_RS08005	SM01294	CUB85_RS08005
CUB85_RS08010	SM00822	CUB85_RS08010
CUB85_RS08010	SM00823	Phosphopantetheine attachment site
CUB85_RS08010	SM00825	Beta-ketoacyl synthase
CUB85_RS08010	SM01294	CUB85_RS08010
CUB85_RS08015	SM00822	CUB85_RS08015
CUB85_RS08015	SM00823	Phosphopantetheine attachment site
CUB85_RS08015	SM00825	Beta-ketoacyl synthase
CUB85_RS08015	SM01294	CUB85_RS08015
CUB85_RS08020	SM00822	CUB85_RS08020
CUB85_RS08020	SM00823	Phosphopantetheine attachment site
CUB85_RS08020	SM01294	CUB85_RS08020
CUB85_RS08035	SM00861	Transketolase, pyrimidine binding domain
CUB85_RS08125	SM00838	Elongation factor G C-terminus
CUB85_RS08145	SM00670	Large family of predicted nucleotide-binding domains
CUB85_RS08170	SM00878	Biotin carboxylase C-terminal domain
CUB85_RS08215	SM00116	Domain in cystathionine beta-synthase and other proteins.
CUB85_RS08320	SM00740	CUB85_RS08320
CUB85_RS08325	SM00740	CUB85_RS08325
CUB85_RS08365	SM00842	Cell division protein FtsA
CUB85_RS08370	SM00864	Tubulin/FtsZ family, GTPase domain
CUB85_RS08370	SM00865	Tubulin/FtsZ family, C-terminal domain
CUB85_RS08395	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS08430	SM00363	S4 RNA-binding domain
CUB85_RS08460	SM00363	S4 RNA-binding domain
CUB85_RS08485	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CUB85_RS08490	SM00851	MGS-like domain
CUB85_RS08490	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CUB85_RS08490	SM01209	CUB85_RS08490
CUB85_RS08505	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CUB85_RS08565	SM00831	Cation transporter/ATPase, N-terminus
CUB85_RS08580	SM00072	Guanylate kinase homologues.
CUB85_RS08585	SM01409	CUB85_RS08585
CUB85_RS08595	SM00487	DEAD-like helicases superfamily
CUB85_RS08595	SM00490	helicase superfamily c-terminal domain
CUB85_RS08620	SM00331	Sigma factor PP2C-like phosphatases
CUB85_RS08620	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CUB85_RS08625	SM00220	Serine/Threonine protein kinases, catalytic domain
CUB85_RS08625	SM00740	CUB85_RS08625
CUB85_RS08640	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
CUB85_RS08660	SM01120	CUB85_RS08660
CUB85_RS08660	SM01121	CUB85_RS08660
CUB85_RS08675	SM00487	DEAD-like helicases superfamily
CUB85_RS08675	SM00490	helicase superfamily c-terminal domain
CUB85_RS08690	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CUB85_RS08695	SM00822	CUB85_RS08695
CUB85_RS08705	SM00358	Double-stranded RNA binding motif
CUB85_RS08705	SM00535	Ribonuclease III family
CUB85_RS08710	SM00968	SMC proteins Flexible Hinge Domain
CUB85_RS08715	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS08715	SM00962	SRP54-type protein, GTPase domain
CUB85_RS08715	SM00963	SRP54-type protein, helical bundle domain
CUB85_RS08730	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS08730	SM00962	SRP54-type protein, GTPase domain
CUB85_RS08730	SM00963	SRP54-type protein, helical bundle domain
CUB85_RS08790	SM00881	CoA binding domain
CUB85_RS08800	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CUB85_RS08800	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CUB85_RS08800	SM00493	CUB85_RS08800
CUB85_RS08820	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS08820	SM01086	C-terminal, D2-small domain, of ClpB protein
CUB85_RS08860	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS08910	SM00448	cheY-homologous receiver domain
CUB85_RS08945	SM00962	SRP54-type protein, GTPase domain
CUB85_RS08955	SM00448	cheY-homologous receiver domain
CUB85_RS08960	SM00073	Histidine Phosphotransfer domain
CUB85_RS08960	SM00260	Two component signalling adaptor domain
CUB85_RS08960	SM00387	Histidine kinase-like ATPases
CUB85_RS08960	SM01231	CUB85_RS08960
CUB85_RS08965	SM00260	Two component signalling adaptor domain
CUB85_RS09025	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CUB85_RS09035	SM00479	CUB85_RS09035
CUB85_RS09035	SM00481	DNA polymerase alpha chain like domain
CUB85_RS09045	SM00316	Ribosomal protein S1-like RNA-binding domain
CUB85_RS09045	SM00322	K homology RNA-binding domain
CUB85_RS09080	SM00904	Riboflavin kinase
CUB85_RS09085	SM01387	CUB85_RS09085
CUB85_RS09090	SM00316	Ribosomal protein S1-like RNA-binding domain
CUB85_RS09090	SM00322	K homology RNA-binding domain
CUB85_RS09120	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CUB85_RS09130	SM01130	CUB85_RS09130
CUB85_RS09135	SM00849	Metallo-beta-lactamase superfamily
CUB85_RS09150	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS09150	SM00843	CUB85_RS09150
CUB85_RS09155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS09155	SM00866	CUB85_RS09155
CUB85_RS09165	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS09200	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS09210	SM00852	Probable molybdopterin binding domain
CUB85_RS09215	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS09225	SM00322	K homology RNA-binding domain
CUB85_RS09225	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CUB85_RS09240	SM00829	Enoylreductase
CUB85_RS09250	SM00729	Elongator protein 3, MiaB family, Radical SAM
CUB85_RS09265	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CUB85_RS09265	SM00534	ATPase domain of DNA mismatch repair MUTS family
CUB85_RS09270	SM00853	MutL C terminal dimerisation domain
CUB85_RS09270	SM01340	CUB85_RS09270
CUB85_RS09305	SM00849	Metallo-beta-lactamase superfamily
CUB85_RS09310	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CUB85_RS09315	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CUB85_RS09320	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CUB85_RS09345	SM00822	CUB85_RS09345
CUB85_RS09345	SM00823	Phosphopantetheine attachment site
CUB85_RS09345	SM00825	Beta-ketoacyl synthase
CUB85_RS09345	SM00826	CUB85_RS09345
CUB85_RS09345	SM01294	CUB85_RS09345
CUB85_RS09350	SM00822	CUB85_RS09350
CUB85_RS09350	SM00823	Phosphopantetheine attachment site
CUB85_RS09350	SM00825	Beta-ketoacyl synthase
CUB85_RS09350	SM00826	CUB85_RS09350
CUB85_RS09350	SM01294	CUB85_RS09350
CUB85_RS09355	SM00822	CUB85_RS09355
CUB85_RS09355	SM00823	Phosphopantetheine attachment site
CUB85_RS09355	SM00825	Beta-ketoacyl synthase
CUB85_RS09355	SM00826	CUB85_RS09355
CUB85_RS09355	SM01294	CUB85_RS09355
CUB85_RS09360	SM00822	CUB85_RS09360
CUB85_RS09360	SM00823	Phosphopantetheine attachment site
CUB85_RS09360	SM00825	Beta-ketoacyl synthase
CUB85_RS09360	SM00826	CUB85_RS09360
CUB85_RS09360	SM01294	CUB85_RS09360
CUB85_RS09365	SM00823	Phosphopantetheine attachment site
CUB85_RS09365	SM00825	Beta-ketoacyl synthase
CUB85_RS09365	SM01294	CUB85_RS09365
CUB85_RS09470	SM00646	CUB85_RS09470
CUB85_RS09480	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS09495	SM00422	helix_turn_helix, mercury resistance
CUB85_RS09500	SM01230	CUB85_RS09500
CUB85_RS09595	SM00829	Enoylreductase
CUB85_RS09680	SM00710	Parallel beta-helix repeats
CUB85_RS09720	SM00257	Lysin motif
CUB85_RS09725	SM00857	Resolvase, N terminal domain
CUB85_RS09735	SM00861	Transketolase, pyrimidine binding domain
CUB85_RS09760	SM00448	cheY-homologous receiver domain
CUB85_RS09830	SM01207	CUB85_RS09830
CUB85_RS09835	SM00881	CoA binding domain
CUB85_RS09840	SM00387	Histidine kinase-like ATPases
CUB85_RS09840	SM00433	TopoisomeraseII
CUB85_RS09845	SM00434	DNA Topoisomerase IV
CUB85_RS09865	SM00829	Enoylreductase
CUB85_RS09885	SM00354	helix_turn _helix lactose operon repressor
CUB85_RS09915	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS09935	SM01067	Cellulose binding domain
CUB85_RS09945	SM00387	Histidine kinase-like ATPases
CUB85_RS09945	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS09950	SM00448	cheY-homologous receiver domain
CUB85_RS09950	SM00862	Transcriptional regulatory protein, C terminal
CUB85_RS09960	SM00606	Cellulose Binding Domain Type IV
CUB85_RS09965	SM00823	Phosphopantetheine attachment site
CUB85_RS09965	SM00824	Thioesterase
CUB85_RS09970	SM00823	Phosphopantetheine attachment site
CUB85_RS09975	SM00823	Phosphopantetheine attachment site
CUB85_RS09975	SM00825	Beta-ketoacyl synthase
CUB85_RS09980	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CUB85_RS09985	SM00822	CUB85_RS09985
CUB85_RS09990	SM00882	Coenzyme A transferase
CUB85_RS09995	SM00882	Coenzyme A transferase
CUB85_RS10010	SM00729	Elongator protein 3, MiaB family, Radical SAM
CUB85_RS10010	SM00876	Biotin and Thiamin Synthesis associated domain
CUB85_RS10070	SM00878	Biotin carboxylase C-terminal domain
CUB85_RS10095	SM00824	Thioesterase
CUB85_RS10100	SM00823	Phosphopantetheine attachment site
CUB85_RS10105	SM00823	Phosphopantetheine attachment site
CUB85_RS10110	SM00823	Phosphopantetheine attachment site
CUB85_RS10110	SM01294	CUB85_RS10110
CUB85_RS10115	SM00823	Phosphopantetheine attachment site
CUB85_RS10150	SM00860	SMI1 / KNR4 family
CUB85_RS10160	SM00644	CUB85_RS10160
CUB85_RS10190	SM00710	Parallel beta-helix repeats
CUB85_RS10195	SM00047	Lysozyme subfamily 2
CUB85_RS10275	SM00507	HNH nucleases
CUB85_RS10370	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS10375	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS10415	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CUB85_RS10455	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CUB85_RS10470	SM00822	CUB85_RS10470
CUB85_RS10515	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS10525	SM00860	SMI1 / KNR4 family
CUB85_RS10540	SM00342	helix_turn_helix, arabinose operon control protein
CUB85_RS10550	SM00849	Metallo-beta-lactamase superfamily
CUB85_RS10560	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CUB85_RS10595	SM00257	Lysin motif
CUB85_RS10600	SM00341	Helicase and RNase D C-terminal
CUB85_RS10600	SM00487	DEAD-like helicases superfamily
CUB85_RS10600	SM00490	helicase superfamily c-terminal domain
CUB85_RS10600	SM00956	CUB85_RS10600
CUB85_RS10685	SM00849	Metallo-beta-lactamase superfamily
CUB85_RS10695	SM00861	Transketolase, pyrimidine binding domain
CUB85_RS10700	SM00327	von Willebrand factor (vWF) type A domain
CUB85_RS10705	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS10715	SM00257	Lysin motif
CUB85_RS10820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS10820	SM00866	CUB85_RS10820
CUB85_RS10825	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CUB85_RS10825	SM00245	tail specific protease
CUB85_RS10860	SM00014	Acid phosphatase homologues
CUB85_RS10910	SM00882	Coenzyme A transferase
CUB85_RS10915	SM00882	Coenzyme A transferase
CUB85_RS10925	SM00871	Bacterial transcription activator, effector binding domain
CUB85_RS11000	SM00028	Tetratricopeptide repeats
CUB85_RS11025	SM00860	SMI1 / KNR4 family
CUB85_RS11035	SM00860	SMI1 / KNR4 family
CUB85_RS11040	SM00318	Staphylococcal nuclease homologues
CUB85_RS11040	SM00894	Excalibur calcium-binding domain
CUB85_RS11045	SM00857	Resolvase, N terminal domain
CUB85_RS11065	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS11140	SM00567	E-Z type HEAT repeats
CUB85_RS11140	SM00932	Scaffold protein Nfu/NifU N terminal
CUB85_RS11145	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CUB85_RS11165	SM00357	Cold shock protein domain
CUB85_RS11205	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CUB85_RS11205	SM00475	5'-3' exonuclease
CUB85_RS11285	SM00491	CUB85_RS11285
CUB85_RS11300	SM00981	CUB85_RS11300
CUB85_RS11330	SM00487	DEAD-like helicases superfamily
CUB85_RS11330	SM00490	helicase superfamily c-terminal domain
CUB85_RS11380	SM00060	Fibronectin type 3 domain
CUB85_RS11390	SM00478	endonuclease III
CUB85_RS11390	SM00525	CUB85_RS11390
CUB85_RS11420	SM00479	CUB85_RS11420
CUB85_RS11420	SM00487	DEAD-like helicases superfamily
CUB85_RS11420	SM00491	CUB85_RS11420
CUB85_RS11460	SM00851	MGS-like domain
CUB85_RS11480	SM00835	Cupin
CUB85_RS11515	SM00914	CUB85_RS11515
CUB85_RS11520	SM00028	Tetratricopeptide repeats
CUB85_RS11590	SM00138	Methyltransferase, chemotaxis proteins 
CUB85_RS11595	SM00562	CUB85_RS11595
CUB85_RS11625	SM00411	bacterial (prokaryotic) histone like domain
CUB85_RS11670	SM00316	Ribosomal protein S1-like RNA-binding domain
CUB85_RS11710	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CUB85_RS11730	SM00257	Lysin motif
CUB85_RS11740	SM00487	DEAD-like helicases superfamily
CUB85_RS11740	SM00490	helicase superfamily c-terminal domain
CUB85_RS11775	SM00091	PAS domain
CUB85_RS11775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CUB85_RS11775	SM00387	Histidine kinase-like ATPases
CUB85_RS11775	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS11780	SM00448	cheY-homologous receiver domain
CUB85_RS11780	SM00862	Transcriptional regulatory protein, C terminal
CUB85_RS11800	SM00363	S4 RNA-binding domain
CUB85_RS11945	SM00387	Histidine kinase-like ATPases
CUB85_RS11955	SM00936	Penicillin-binding protein 5, C-terminal domain 
CUB85_RS12000	SM00919	Malic enzyme, NAD binding domain
CUB85_RS12000	SM01274	CUB85_RS12000
CUB85_RS12015	SM00870	CUB85_RS12015
CUB85_RS12020	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS12125	SM00849	Metallo-beta-lactamase superfamily
CUB85_RS12150	SM00823	Phosphopantetheine attachment site
CUB85_RS12150	SM00825	Beta-ketoacyl synthase
CUB85_RS12150	SM00829	Enoylreductase
CUB85_RS12150	SM01294	CUB85_RS12150
CUB85_RS12155	SM00822	CUB85_RS12155
CUB85_RS12155	SM00823	Phosphopantetheine attachment site
CUB85_RS12155	SM00825	Beta-ketoacyl synthase
CUB85_RS12155	SM00826	CUB85_RS12155
CUB85_RS12160	SM00822	CUB85_RS12160
CUB85_RS12160	SM00823	Phosphopantetheine attachment site
CUB85_RS12160	SM00825	Beta-ketoacyl synthase
CUB85_RS12160	SM01294	CUB85_RS12160
CUB85_RS12165	SM00822	CUB85_RS12165
CUB85_RS12165	SM00823	Phosphopantetheine attachment site
CUB85_RS12165	SM00825	Beta-ketoacyl synthase
CUB85_RS12165	SM00826	CUB85_RS12165
CUB85_RS12165	SM01294	CUB85_RS12165
CUB85_RS12170	SM00822	CUB85_RS12170
CUB85_RS12170	SM00823	Phosphopantetheine attachment site
CUB85_RS12170	SM00825	Beta-ketoacyl synthase
CUB85_RS12170	SM00826	CUB85_RS12170
CUB85_RS12170	SM01294	CUB85_RS12170
CUB85_RS12175	SM00822	CUB85_RS12175
CUB85_RS12175	SM00823	Phosphopantetheine attachment site
CUB85_RS12175	SM00825	Beta-ketoacyl synthase
CUB85_RS12175	SM01294	CUB85_RS12175
CUB85_RS12180	SM00822	CUB85_RS12180
CUB85_RS12180	SM00823	Phosphopantetheine attachment site
CUB85_RS12180	SM00825	Beta-ketoacyl synthase
CUB85_RS12180	SM00826	CUB85_RS12180
CUB85_RS12180	SM01294	CUB85_RS12180
CUB85_RS12205	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CUB85_RS12215	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CUB85_RS12250	SM00849	Metallo-beta-lactamase superfamily
CUB85_RS12260	SM01350	CUB85_RS12260
CUB85_RS12305	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS12315	SM00062	Bacterial periplasmic substrate-binding proteins
CUB85_RS12315	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CUB85_RS12325	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CUB85_RS12335	SM00861	Transketolase, pyrimidine binding domain
CUB85_RS12355	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CUB85_RS12365	SM00091	PAS domain
CUB85_RS12365	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS12410	SM00646	CUB85_RS12410
CUB85_RS12425	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS12445	SM01005	Alanine racemase, C-terminal domain
CUB85_RS12455	SM00448	cheY-homologous receiver domain
CUB85_RS12460	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CUB85_RS12475	SM00363	S4 RNA-binding domain
CUB85_RS12480	SM00861	Transketolase, pyrimidine binding domain
CUB85_RS12515	SM00878	Biotin carboxylase C-terminal domain
CUB85_RS12560	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS12570	SM00841	Elongation factor P, C-terminal
CUB85_RS12570	SM01185	CUB85_RS12570
CUB85_RS12600	SM00529	Helix-turn-helix diphteria tox regulatory element
CUB85_RS12610	SM00450	Rhodanese Homology Domain
CUB85_RS12630	SM00487	DEAD-like helicases superfamily
CUB85_RS12630	SM00490	helicase superfamily c-terminal domain
CUB85_RS12645	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS12705	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS12715	SM01091	Transporter associated domain
CUB85_RS12740	SM00849	Metallo-beta-lactamase superfamily
CUB85_RS12760	SM00631	CUB85_RS12760
CUB85_RS12805	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS12810	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS12855	SM00257	Lysin motif
CUB85_RS12890	SM00518	AP endonuclease family 2
CUB85_RS12895	SM00487	DEAD-like helicases superfamily
CUB85_RS12895	SM00490	helicase superfamily c-terminal domain
CUB85_RS12930	SM00400	zinc finger
CUB85_RS12930	SM00493	CUB85_RS12930
CUB85_RS12945	SM00116	Domain in cystathionine beta-synthase and other proteins.
CUB85_RS12990	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CUB85_RS13040	SM00729	Elongator protein 3, MiaB family, Radical SAM
CUB85_RS13055	SM00271	DnaJ molecular chaperone homology domain
CUB85_RS13075	SM00729	Elongator protein 3, MiaB family, Radical SAM
CUB85_RS13080	SM00838	Elongation factor G C-terminus
CUB85_RS13115	SM00849	Metallo-beta-lactamase superfamily
CUB85_RS13125	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CUB85_RS13145	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CUB85_RS13155	SM01103	CUB85_RS13155
CUB85_RS13235	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS13240	SM00448	cheY-homologous receiver domain
CUB85_RS13240	SM00862	Transcriptional regulatory protein, C terminal
CUB85_RS13315	SM00849	Metallo-beta-lactamase superfamily
CUB85_RS13370	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CUB85_RS13370	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CUB85_RS13455	SM00732	Likely ribonuclease with RNase H fold.
CUB85_RS13465	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CUB85_RS13475	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS13480	SM00062	Bacterial periplasmic substrate-binding proteins
CUB85_RS13480	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CUB85_RS13510	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS13515	SM00028	Tetratricopeptide repeats
CUB85_RS13535	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS13565	SM00287	Bacterial SH3 domain homologues
CUB85_RS13565	SM00646	CUB85_RS13565
CUB85_RS13575	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CUB85_RS13575	SM00954	Region found in RelA / SpoT proteins
CUB85_RS13625	SM01323	CUB85_RS13625
CUB85_RS13645	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS13650	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CUB85_RS13670	SM00257	Lysin motif
CUB85_RS13715	SM01317	CUB85_RS13715
CUB85_RS13810	SM00257	Lysin motif
CUB85_RS13820	SM01004	Delta-aminolevulinic acid dehydratase
CUB85_RS13855	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS13855	SM00464	Found in ATP-dependent protease La (LON)
CUB85_RS13860	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS13865	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS13865	SM00994	ClpX C4-type zinc finger
CUB85_RS13865	SM01086	C-terminal, D2-small domain, of ClpB protein
CUB85_RS13890	SM01329	CUB85_RS13890
CUB85_RS13895	SM00917	LeuA allosteric (dimerisation) domain
CUB85_RS13950	SM00487	DEAD-like helicases superfamily
CUB85_RS13950	SM00490	helicase superfamily c-terminal domain
CUB85_RS13985	SM00909	Sporulation and spore germination
CUB85_RS13995	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS14000	SM00421	helix_turn_helix, Lux Regulon
CUB85_RS14040	SM00465	GIY-YIG type nucleases (URI domain)
CUB85_RS14050	SM00813	Alpha-L-arabinofuranosidase C-terminus
CUB85_RS14055	SM00893	Electron transfer flavoprotein domain
CUB85_RS14060	SM00893	Electron transfer flavoprotein domain
CUB85_RS14095	SM00463	Small MutS-related domain
CUB85_RS14095	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CUB85_RS14095	SM00534	ATPase domain of DNA mismatch repair MUTS family
CUB85_RS14100	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CUB85_RS14100	SM00481	DNA polymerase alpha chain like domain
CUB85_RS14100	SM00483	DNA polymerase X family
CUB85_RS14120	SM00873	B3/4 domain
CUB85_RS14120	SM00874	tRNA synthetase B5 domain
CUB85_RS14120	SM00896	Ferredoxin-fold anticodon binding domain
CUB85_RS14130	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CUB85_RS14160	SM00813	Alpha-L-arabinofuranosidase C-terminus
CUB85_RS14190	SM01007	Class II Aldolase and Adducin N-terminal domain
CUB85_RS14250	SM00448	cheY-homologous receiver domain
CUB85_RS14250	SM00850	LytTr DNA-binding domain
CUB85_RS14255	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CUB85_RS14255	SM00387	Histidine kinase-like ATPases
CUB85_RS14265	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CUB85_RS14280	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS14300	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CUB85_RS14330	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CUB85_RS14330	SM01232	CUB85_RS14330
CUB85_RS14335	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CUB85_RS14335	SM00474	3'-5' exonuclease
CUB85_RS14335	SM00475	5'-3' exonuclease
CUB85_RS14335	SM00482	DNA polymerase A domain
CUB85_RS14340	SM00091	PAS domain
CUB85_RS14340	SM00387	Histidine kinase-like ATPases
CUB85_RS14340	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS14345	SM00448	cheY-homologous receiver domain
CUB85_RS14345	SM00862	Transcriptional regulatory protein, C terminal
CUB85_RS14355	SM01329	CUB85_RS14355
CUB85_RS14425	SM00919	Malic enzyme, NAD binding domain
CUB85_RS14425	SM01274	CUB85_RS14425
CUB85_RS14430	SM00481	DNA polymerase alpha chain like domain
CUB85_RS14460	SM00116	Domain in cystathionine beta-synthase and other proteins.
CUB85_RS14465	SM00849	Metallo-beta-lactamase superfamily
CUB85_RS14490	SM00852	Probable molybdopterin binding domain
CUB85_RS14550	SM00981	CUB85_RS14550
CUB85_RS14585	SM00267	diguanylate cyclase
CUB85_RS14595	SM00363	S4 RNA-binding domain
CUB85_RS14595	SM01390	CUB85_RS14595
CUB85_RS14680	SM00363	S4 RNA-binding domain
CUB85_RS14700	SM00116	Domain in cystathionine beta-synthase and other proteins.
CUB85_RS14720	SM00354	helix_turn _helix lactose operon repressor
CUB85_RS14725	SM00830	Chorismate mutase type II
CUB85_RS14750	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS14750	SM00843	CUB85_RS14750
CUB85_RS14785	SM00919	Malic enzyme, NAD binding domain
CUB85_RS14785	SM01274	CUB85_RS14785
CUB85_RS14790	SM00849	Metallo-beta-lactamase superfamily
CUB85_RS14810	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CUB85_RS14845	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS14850	SM00420	helix_turn_helix, Deoxyribose operon repressor
CUB85_RS14855	SM00363	S4 RNA-binding domain
CUB85_RS14880	SM00354	helix_turn _helix lactose operon repressor
CUB85_RS14910	SM00450	Rhodanese Homology Domain
CUB85_RS14925	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CUB85_RS14925	SM00091	PAS domain
CUB85_RS14945	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS14950	SM00387	Histidine kinase-like ATPases
CUB85_RS14955	SM00448	cheY-homologous receiver domain
CUB85_RS14955	SM00862	Transcriptional regulatory protein, C terminal
CUB85_RS14965	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS14985	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS14990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS15000	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CUB85_RS15010	SM00729	Elongator protein 3, MiaB family, Radical SAM
CUB85_RS15080	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS15120	SM01234	CUB85_RS15120
CUB85_RS15125	SM00947	Carbonic anhydrase
CUB85_RS15150	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CUB85_RS15315	SM00244	prohibitin homologues
CUB85_RS15365	SM00047	Lysozyme subfamily 2
CUB85_RS15380	SM00835	Cupin
CUB85_RS15425	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CUB85_RS15425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CUB85_RS15425	SM00319	Homologues of the ligand binding domain of Tar
CUB85_RS15430	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CUB85_RS15430	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CUB85_RS15430	SM00319	Homologues of the ligand binding domain of Tar
CUB85_RS15435	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CUB85_RS15435	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CUB85_RS15435	SM00319	Homologues of the ligand binding domain of Tar
CUB85_RS15440	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CUB85_RS15440	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CUB85_RS15440	SM00319	Homologues of the ligand binding domain of Tar
CUB85_RS15465	SM00642	Alpha-amylase domain
CUB85_RS15470	SM01091	Transporter associated domain
CUB85_RS15540	SM00316	Ribosomal protein S1-like RNA-binding domain
CUB85_RS15550	SM00344	helix_turn_helix ASNC type
CUB85_RS15570	SM00387	Histidine kinase-like ATPases
CUB85_RS15570	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS15575	SM01298	CUB85_RS15575
CUB85_RS15580	SM00479	CUB85_RS15580
CUB85_RS15605	SM00091	PAS domain
CUB85_RS15605	SM00387	Histidine kinase-like ATPases
CUB85_RS15610	SM00448	cheY-homologous receiver domain
CUB85_RS15620	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS15680	SM00421	helix_turn_helix, Lux Regulon
CUB85_RS15680	SM00448	cheY-homologous receiver domain
CUB85_RS15715	SM00052	Putative diguanylate phosphodiesterase
CUB85_RS15755	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CUB85_RS15800	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CUB85_RS15800	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CUB85_RS15810	SM00923	MbtH-like protein
CUB85_RS15815	SM00823	Phosphopantetheine attachment site
CUB85_RS15815	SM00824	Thioesterase
CUB85_RS15835	SM00822	CUB85_RS15835
CUB85_RS15895	SM01240	CUB85_RS15895
CUB85_RS15910	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS16025	SM00729	Elongator protein 3, MiaB family, Radical SAM
CUB85_RS16095	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS16100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS16100	SM00866	CUB85_RS16100
CUB85_RS16130	SM00422	helix_turn_helix, mercury resistance
CUB85_RS16145	SM00465	GIY-YIG type nucleases (URI domain)
CUB85_RS16190	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS16215	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS16215	SM00930	CUB85_RS16215
CUB85_RS16230	SM00493	CUB85_RS16230
CUB85_RS16285	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS16315	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS16330	SM00822	CUB85_RS16330
CUB85_RS16340	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CUB85_RS16345	SM00448	cheY-homologous receiver domain
CUB85_RS16345	SM00862	Transcriptional regulatory protein, C terminal
CUB85_RS16350	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CUB85_RS16350	SM00387	Histidine kinase-like ATPases
CUB85_RS16350	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS16390	SM00421	helix_turn_helix, Lux Regulon
CUB85_RS16390	SM00448	cheY-homologous receiver domain
CUB85_RS16395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CUB85_RS16395	SM00387	Histidine kinase-like ATPases
CUB85_RS16430	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS16455	SM00387	Histidine kinase-like ATPases
CUB85_RS16455	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS16460	SM00448	cheY-homologous receiver domain
CUB85_RS16460	SM00862	Transcriptional regulatory protein, C terminal
CUB85_RS16480	SM00835	Cupin
CUB85_RS16495	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS16555	SM00421	helix_turn_helix, Lux Regulon
CUB85_RS16555	SM00448	cheY-homologous receiver domain
CUB85_RS16565	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS16665	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS16700	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS16715	SM00062	Bacterial periplasmic substrate-binding proteins
CUB85_RS16720	SM00062	Bacterial periplasmic substrate-binding proteins
CUB85_RS16755	SM00316	Ribosomal protein S1-like RNA-binding domain
CUB85_RS16755	SM00357	Cold shock protein domain
CUB85_RS16755	SM00955	CUB85_RS16755
CUB85_RS16770	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS16775	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS16780	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS16790	SM00387	Histidine kinase-like ATPases
CUB85_RS16790	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS16795	SM00448	cheY-homologous receiver domain
CUB85_RS16795	SM00862	Transcriptional regulatory protein, C terminal
CUB85_RS16810	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS16830	SM00116	Domain in cystathionine beta-synthase and other proteins.
CUB85_RS16830	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS16855	SM00116	Domain in cystathionine beta-synthase and other proteins.
CUB85_RS16855	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS16930	SM00984	UDP binding domain
CUB85_RS16940	SM01192	CUB85_RS16940
CUB85_RS16940	SM01193	CUB85_RS16940
CUB85_RS16965	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CUB85_RS16980	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS17020	SM00354	helix_turn _helix lactose operon repressor
CUB85_RS17070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS17070	SM00895	CUB85_RS17070
CUB85_RS17165	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS17245	SM00640	Glycosyl hydrolases family 32
CUB85_RS17255	SM00354	helix_turn _helix lactose operon repressor
CUB85_RS17295	SM00947	Carbonic anhydrase
CUB85_RS17355	SM00028	Tetratricopeptide repeats
CUB85_RS17360	SM00387	Histidine kinase-like ATPases
CUB85_RS17360	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS17365	SM00448	cheY-homologous receiver domain
CUB85_RS17365	SM00862	Transcriptional regulatory protein, C terminal
CUB85_RS17370	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS17450	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS17450	SM00866	CUB85_RS17450
CUB85_RS17490	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS17495	SM00487	DEAD-like helicases superfamily
CUB85_RS17495	SM00490	helicase superfamily c-terminal domain
CUB85_RS17530	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CUB85_RS17540	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CUB85_RS17540	SM00245	tail specific protease
CUB85_RS17545	SM00710	Parallel beta-helix repeats
CUB85_RS17545	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
CUB85_RS17555	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS17575	SM00957	SecA DEAD-like domain
CUB85_RS17575	SM00958	SecA preprotein cross-linking domain
CUB85_RS17660	SM00487	DEAD-like helicases superfamily
CUB85_RS17660	SM00490	helicase superfamily c-terminal domain
CUB85_RS17670	SM00421	helix_turn_helix, Lux Regulon
CUB85_RS17670	SM00448	cheY-homologous receiver domain
CUB85_RS17675	SM00387	Histidine kinase-like ATPases
CUB85_RS17715	SM00984	UDP binding domain
CUB85_RS17735	SM00646	CUB85_RS17735
CUB85_RS17765	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS17800	SM00047	Lysozyme subfamily 2
CUB85_RS17800	SM00287	Bacterial SH3 domain homologues
CUB85_RS17860	SM00854	Bacterial capsule synthesis protein PGA_cap
CUB85_RS17895	SM00354	helix_turn _helix lactose operon repressor
CUB85_RS17910	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS17925	SM00287	Bacterial SH3 domain homologues
CUB85_RS17975	SM00903	Flavin reductase like domain
CUB85_RS17990	SM00344	helix_turn_helix ASNC type
CUB85_RS18015	SM00860	SMI1 / KNR4 family
CUB85_RS18060	SM00984	UDP binding domain
CUB85_RS18095	SM00487	DEAD-like helicases superfamily
CUB85_RS18095	SM00490	helicase superfamily c-terminal domain
CUB85_RS18105	SM00420	helix_turn_helix, Deoxyribose operon repressor
CUB85_RS18105	SM01134	CUB85_RS18105
CUB85_RS18135	SM00028	Tetratricopeptide repeats
CUB85_RS18160	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS18190	SM00938	Nitrogen regulatory protein P-II
CUB85_RS18200	SM00014	Acid phosphatase homologues
CUB85_RS18230	SM00155	Phospholipase D. Active site motifs.
CUB85_RS18285	SM00028	Tetratricopeptide repeats
CUB85_RS18290	SM00729	Elongator protein 3, MiaB family, Radical SAM
CUB85_RS18305	SM00327	von Willebrand factor (vWF) type A domain
CUB85_RS18310	SM00327	von Willebrand factor (vWF) type A domain
CUB85_RS18350	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS18410	SM00226	Low molecular weight phosphatase family
CUB85_RS18450	SM00937	CUB85_RS18450
CUB85_RS18470	SM00919	Malic enzyme, NAD binding domain
CUB85_RS18470	SM01274	CUB85_RS18470
CUB85_RS18485	SM00357	Cold shock protein domain
CUB85_RS18485	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS18485	SM00959	Rho termination factor, N-terminal domain
CUB85_RS18510	SM00448	cheY-homologous receiver domain
CUB85_RS18535	SM00155	Phospholipase D. Active site motifs.
CUB85_RS18550	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS18555	SM00155	Phospholipase D. Active site motifs.
CUB85_RS18580	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CUB85_RS18595	SM00100	Cyclic nucleotide-monophosphate binding domain
CUB85_RS18595	SM00419	helix_turn_helix, cAMP Regulatory protein
CUB85_RS18605	SM00836	DALR anticodon binding domain
CUB85_RS18605	SM01016	Arginyl tRNA synthetase N terminal dom
CUB85_RS18635	SM00028	Tetratricopeptide repeats
CUB85_RS18645	SM00530	Helix-turn-helix XRE-family like proteins 
CUB85_RS18675	SM00421	helix_turn_helix, Lux Regulon
CUB85_RS18715	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS18735	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CUB85_RS18760	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS18875	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CUB85_RS18880	SM00387	Histidine kinase-like ATPases
CUB85_RS18880	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS18885	SM00448	cheY-homologous receiver domain
CUB85_RS18885	SM00862	Transcriptional regulatory protein, C terminal
CUB85_RS18900	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS18935	SM00858	CUB85_RS18935
CUB85_RS18980	SM00986	Uracil DNA glycosylase superfamily
CUB85_RS18980	SM00987	UreE urease accessory protein, C-terminal domain 
CUB85_RS19015	SM00640	Glycosyl hydrolases family 32
CUB85_RS19025	SM01061	CAT RNA binding domain
CUB85_RS19165	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS19200	SM00422	helix_turn_helix, mercury resistance
CUB85_RS19210	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CUB85_RS19240	SM00954	Region found in RelA / SpoT proteins
CUB85_RS19335	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CUB85_RS19380	SM01060	CUB85_RS19380
CUB85_RS19400	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS19405	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS19430	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS19490	SM01060	CUB85_RS19490
CUB85_RS19505	SM01061	CAT RNA binding domain
CUB85_RS19515	SM00487	DEAD-like helicases superfamily
CUB85_RS19515	SM00490	helicase superfamily c-terminal domain
CUB85_RS19575	SM00656	CUB85_RS19575
CUB85_RS19605	SM00487	DEAD-like helicases superfamily
CUB85_RS19605	SM00490	helicase superfamily c-terminal domain
CUB85_RS19650	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CUB85_RS19660	SM01133	CUB85_RS19660
CUB85_RS19715	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS19720	SM00387	Histidine kinase-like ATPases
CUB85_RS19725	SM00448	cheY-homologous receiver domain
CUB85_RS19725	SM00862	Transcriptional regulatory protein, C terminal
CUB85_RS19780	SM00420	helix_turn_helix, Deoxyribose operon repressor
CUB85_RS19780	SM01134	CUB85_RS19780
CUB85_RS19795	SM00387	Histidine kinase-like ATPases
CUB85_RS19810	SM00421	helix_turn_helix, Lux Regulon
CUB85_RS19810	SM00448	cheY-homologous receiver domain
CUB85_RS19840	SM00564	beta-propeller repeat
CUB85_RS19850	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CUB85_RS19900	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CUB85_RS19905	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CUB85_RS19980	SM00028	Tetratricopeptide repeats
CUB85_RS20005	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CUB85_RS20010	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS20015	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CUB85_RS20020	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS20040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CUB85_RS20040	SM00387	Histidine kinase-like ATPases
CUB85_RS20040	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS20050	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CUB85_RS20055	SM00849	Metallo-beta-lactamase superfamily
CUB85_RS20070	SM00091	PAS domain
CUB85_RS20070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CUB85_RS20070	SM00387	Histidine kinase-like ATPases
CUB85_RS20070	SM00388	His Kinase A (phosphoacceptor) domain
CUB85_RS20075	SM00448	cheY-homologous receiver domain
CUB85_RS20075	SM00862	Transcriptional regulatory protein, C terminal
CUB85_RS20105	SM00788	Adenylosuccinate synthetase
CUB85_RS20115	SM00382	ATPases associated with a variety of cellular activities
CUB85_RS20180	SM00267	diguanylate cyclase
CUB85_RS20205	SM01131	CUB85_RS20205
CUB85_RS20220	SM00640	Glycosyl hydrolases family 32
CUB85_RS20225	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS20225	SM00895	CUB85_RS20225
CUB85_RS20260	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS20270	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUB85_RS20315	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUB85_RS20345	SM00354	helix_turn _helix lactose operon repressor
CUB85_RS20360	SM00342	helix_turn_helix, arabinose operon control protein
CUB85_RS20385	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CUB85_RS20410	SM00470	ParB-like nuclease domain
CUB85_RS20420	SM00470	ParB-like nuclease domain
CUB85_RS20430	SM01228	CUB85_RS20430
CUB85_RS20440	SM00393	Putative single-stranded nucleic acids-binding domain
CUB85_RS20440	SM01245	CUB85_RS20440
