        rlbA NONE
        recF NONE
HC661_RS00025    4852 ..    4866 +  -2.1  -3.61654   TTTATGTTAGAAATA               GATTC TTAGC GGATC               TTTACAATGAATATA  47 17
        gyrB    6842 ..    6867 +    -7  -5.24129   TATTTAACCAAGAAA         GCCTTATTTT CGTTAA GAAATAAGGC          TTTTTTCTCAAAGCG  89 34
        gyrA    9511 ..    9544 + -17.7  -2.87564   GGAAGAAGTATAAAC     GTAAAAGCGCAG-CTG CAA CAGGCTGCGCTTTTAC     TATATAAAGAAATGA 100 28
HC661_RS00040   11352 ..   11364 +  -6.3  -4.09243   TGCGGCTGGATCACC                TCCTT TCT AAGGA                TTTTAACGGAATATA  69 18
HC661_RS00045 NONE
HC661_RS00050   11685 ..   11695 +  -5.4  -4.42235   TAGTAATGCAAGATA                 TCAC GTA GTGA                 TTCTTTTTAACGGTT  70 86
HC661_RS00055   14666 ..   14683 +  -8.5  -2.96873   TACTGTTATCTGGTT             TTGAGAG AACA CTCTCAA              TGGTTTGGTGGCGAT  67 52
         rrf   14817 ..   14837 + -15.5  -5.72622   CTATATTATGGTAAA            GGCAGCTCA TCA TGAGCTGCC            TTTTTTGTTTATAAG 100 40
        guaB   17404 ..   17428 +  -9.3  -6.02914   ACAAATAAAAAACAT          TTGACAGGGTC GCT GACTCTGTCTA          TTTTTTTTATATCGA 100 46
HC661_RS00075   18879 ..   18902 +    -6   -4.4773   TTAAGAAATAAGAAA          GAGCTCTGAT GAAA GTTAGGGCTC           TTTTGCTTAATATAC  74 37
        pdxS NONE
        pdxT   20810 ..   20841 + -15.2  -5.80951   AGGGTGGCAACGCGA      GAGCTCTCGTCCCT TTTA GGGGATGAGGGCTC       TTTTTTATTTTCGAT 100 274
        serS   22162 ..   22182 + -11.8  -5.14563   ATCAAACCATAAAAA            GGTGCGCC CTAGA GGCGCGCC            TTTTTTGCTGCCCGG 100 29
HC661_RS00100   23674 ..   23696 + -16.4  -5.36441   TTGGAGATTGTTTTG           TCCGCTGCAT GTG ATGCAGCGGA           TTTTTTATATGCAAA 100 76
HC661_RS00125   27625 ..   27662 +  -3.5  -4.11625   TGCCTGAAGCAGATA   TACTTATGTGTGCATCA TAAA TGGTGCGCATATAAAAA    TTTGATATTTATTTT  56 56
         ffs   27967 ..   27989 + -10.6  -5.24989   TCATCAAATTTCAGA           CTCACCTGTT TAT GGCAGGTGAG           TTTTTTCGTATATGA 100 49
        dnaX NONE
HC661_RS00140 NONE
        recR NONE
HC661_RS00150   30981 ..   31036 +  -5.5  -2.86125   AGTAAGAGGTCTATT CTCCG-GGATCTTCTCATAAGCTTGT ACTAA ACAAGCGAGGGGGAAGATTCATGGAG CCTTTTTTCATTATC  52 36
        bofA   31526 ..   31542 +  -2.3   -3.8709   CGCACAGCGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  51 257
HC661_RS00160   33088 ..   33100 +  -6.3  -4.09243   TGCGGCTGGATCACC                TCCTT TCT AAGGA                TTTTAACGGAATATA  69 18
HC661_RS00165 NONE
HC661_RS00170   33422 ..   33432 +  -5.4  -4.42235   TAGTAATGCAAGATA                 TCAC GTA GTGA                 TTCTTTTTAACGGTT  70 86
HC661_RS00175   36403 ..   36420 +  -8.5  -2.96873   TACTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TGGTTTGGTGGCGAT  67 52
         rrf   36556 ..   36576 + -15.5  -5.93252   TATCATTACGGTAAA            GGCAGCTCA TGA TGAGCTGCC            TTTTTTGTTTTTGAA 100 41
HC661_RS00185   36908 ..   36923 +  -3.2  -6.11644   CGACGTTATATTCTT              AACCCT GAAA AGGGTC               TTTTTTTTTGCCTGA 100 24
HC661_RS00190 NONE
HC661_RS00195   38867 ..   38877 +    -4  -3.57144   AATAAGAAAGACAGG                 CAAA GGA TTTG                 TTTAAAAATGGACAC  52 85
HC661_RS00200 NONE
HC661_RS00205 NONE
        darA   41331 ..   41347 +  -3.7  -4.17089   TCTTTGTCCTCCCGG              TCGATGA ATT TCATCAA              TTTTAAGGATTTGAC  61 3
HC661_RS00215 NONE
        holB NONE
        ricT NONE
        yabA   44018 ..   44040 + -10.6  -4.57569   AAAAAATAAGGAAAA           GGCTTCCG CTGATGT CGGAAGCC           TTTTTCAAAGAGTGC  91 32
HC661_RS00235 NONE
HC661_RS00240 NONE
        rsmI   45965 ..   45990 +   -12   -4.9792   AATCATAAAAAAAAA         CCGTTCTTGT ATCGTA ACAAGAACGG          TTTTTGTATGAAATA 100 33
        metG   48780 ..   48821 +  -8.9  -4.56597   TTAAATAAATAGATG CAAAAGGTGTTTCACGTGTA ACA TTC-CGTCGAACACCTTTTG TTTTTCAACAAGAAA  88 33
HC661_RS00260 NONE
HC661_RS00265   51089 ..   51109 +    -9  -5.68023   TAATTCCGATTCACT            CAGAGGGT TTTGC GCCCTCTG            TTTTTTTCGTTATAA 100 38
        rnmV NONE
        rsmA   52634 ..   52651 +  -7.7  -5.48213   AACGGATTGCATAAA             GCCCTTT TCTA AGAGGGC              TTTTTGTTTTGCGTC  93 14
        yabG   53703 ..   53726 +  -8.2    -3.694   GGATGAGTGATAAAA          CCCGCATA TATTTCGC TATGCGGG           TTAATTATTTTACAT  70 35
HC661_RS00285   54169 ..   54191 +  -8.5  -5.49568   GTAGCATTTTAATGG           GCAGTGAAC CTTTT GTTTACTGC           TTTTTGTTTTGCCTT  95 29
HC661_RS00290   54526 ..   54548 + -12.7  -5.36441   CGATAATGCAGTGGC           CCGGGGGAC AATCC GTTCCCCGG           TTTTTTCTATCGGCA 100 35
HC661_RS00295 NONE
        purR NONE
HC661_RS00305   56831 ..   56853 +   -12    -5.626   TTAAATCTCAGAAAA           GTGGTTCCGG TCT CCGGGATCAC           TTTTTTTATGCAGTA 100 37
       spoVG   57325 ..   57367 + -10.6  -5.13473   CATAACAAAATGTAA GGACTGCTGATAAAGGCT GACACAA GGCCTTTTCCGGCAGTCC TTTTTTAAATCTGAT  93 42
        glmU NONE
HC661_RS00320   59868 ..   59882 +  -2.8  -3.50808   CTTTAAGGTTTAAAT               CCCA GTTATTG TGGG               TATTGTTCTAATAGG  48 48
HC661_RS00325   60548 ..   60572 + -10.1  -4.46926   CAATAAGCGCTTTAA          GACGTAACC CGCCCGA GGTTACGTC          TTTTGTGCTAGAATG  90 35
HC661_RS00330 NONE
HC661_RS00335   61484 ..   61512 +  -8.9   -5.2015   ATTTATTCAATAAGA        AGCTTTGGTGTAG ATT CTAGACCAAAGCG        TTTTTCTGTTCTTGC  93 28
         mfd   65102 ..   65112 +    -4  -3.83205   ATTGTTACTCTCTGG                 TGTA TAT TACA                 TTTGATGTGACGGAT  57 43
       spoVT   65795 ..   65820 + -10.5  -4.89233   AAGAAAACGGGGAAA         GAACAGCTCTT ATAC AAGTGCTGTTC          TTTTTCATATTCATA  93 63
HC661_RS00350 NONE
        mazG NONE
HC661_RS00360 NONE
        yabP NONE
        yabQ NONE
HC661_RS00375   70653 ..   70670 +  -3.5  -2.90075   GTAGCCTTGTTGACA             CTTAAAT TTTT ATTTAGG              TATAATTAAACAAAC  44 37
HC661_RS00380   71135 ..   71158 +  -5.3  -5.72616   CTATAAATACATGGA          GCATCCGTCT ATCCC AG-CGGGTGC          TTTTTTTGTATGCGT 100 52
HC661_RS00385 NONE
HC661_RS00390   71434 ..   71456 + -16.4  -5.32699   GGGTCATCAAGCGAA           TCGGCTTCTG TTG CAGAAGCCGA           TTTTTTCATATTTAG 100 32
      spoIIE NONE
HC661_RS00400 NONE
HC661_RS00405   75908 ..   75921 +  -2.3  -4.15884   TAGTGCCGGCCGGAC               GCCTG CGCT CATGC                TTCTTCTTTGCTTGG  56 38
        tilS NONE
         hpt   77969 ..   77984 +  -3.2  -3.67878   ATCGGCTGCCTGCTT              CCGAGA TGGT TATCGG               TTGTATTGGAATGAT  52 40
        ftsH   79992 ..   80011 + -12.1  -5.58074   TTTCTGATATGAAAA            CCGCCGG CGTATA CCGGCGG             TTTTTTTGCTGGTTC 100 46
HC661_RS00425 NONE
        hslO   81772 ..   81797 + -14.1  -4.02581   AGCTTCGTGACGAAA         CAACCCGCTAG CTCT TTAGCGGGTTG          TTCTATTTTATAAAA 100 15
HC661_RS00435 NONE
        cysK   83735 ..   83754 + -10.7  -5.64274   GAGACATACACACGG            CTCCCGG CTGTAC CCGGGAG             TTTTTTTGTGCCTGA 100 40
        pabB NONE
        pabA NONE
        pabC NONE
        folP NONE
        folB NONE
        folK NONE
HC661_RS00475 NONE
        dusB   89685 ..   89705 + -12.6   -5.1286   CTCTATTGCTGCTCA            CTGCCAGC TTACC GCTGGCAG            TTTTTCTGCTTTTTC 100 49
        lysS   91262 ..   91291 +   -10  -5.00616   CTAATAAAAGGGAAG       GCGCCGTTTCTGC TTATC GCAGTA-CGGCGC       TTTTTTAGAAACAAG  93 37
HC661_RS00490   93282 ..   93292 +  -5.4  -4.42235   TAGTAATGCAAGATA                 TCAC GTA GTGA                 TTCTTTTTAACGGTT  70 177
HC661_RS00495   96263 ..   96280 +  -8.5  -2.96873   TACTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TGGTTTGGTGGCGAT  67 52
         rrf   96402 ..   96417 +  -6.2  -2.88579   GACGCCGCCAAGCTA              TTACAC GTAA GTGTAA               TATATGGAGGATTAG  55 28
HC661_RS00505 NONE
HC661_RS00510 NONE
HC661_RS00515 NONE
HC661_RS00520   96787 ..   96798 +  -4.4  -2.87564   CACCCGCATTATACA                GGAT AACT ATCC                 TGTATGCGGAAGTAG  48 33
HC661_RS00525 NONE
HC661_RS00530   96968 ..   96978 +  -2.4  -3.58208   TGCCGGTTCAAGTCC                 GGCC CTC GGCA                 TTCGTTATTATGCGC  47 15
HC661_RS00535 NONE
HC661_RS00540 NONE
HC661_RS00545   97387 ..   97403 +  -2.3   -3.8709   CGCACAGCGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  51 174
HC661_RS00550   99108 ..   99118 +  -5.4  -4.42235   TAGTAATGCAAGATA                 TCAC GTA GTGA                 TTCTTTTTAACGGTT  70 177
HC661_RS00555  102089 ..  102106 +  -8.5  -2.96873   TACTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TGGTTTGGTGGCGAT  67 52
         rrf  102241 ..  102261 + -15.5  -5.69068   TATCATTACGGTAAA            GGCAGCTCA TCA TGAGCTGCC            TTTTTTGTGTTTTTC 100 41
        ctsR NONE
HC661_RS00570 NONE
HC661_RS00575 NONE
HC661_RS00580  107023 ..  107052 +  -9.4  -3.22874   ATATAGTGACAAACA       TGAGGCATACGT AAGCGA GTGTATGCCTCA        CTTTGTTATATAGAG  73 40
        radA NONE
        disA  109584 ..  109594 +  -4.6   -2.6043   AATCGCTTAAACCTG                 TCGG AAT CCGG                 GTATATTATTGTTAG  47 42
HC661_RS00595  110763 ..  110774 +  -4.4  -2.87211   TGCCAAGCCCAAGCT                GCTT GAGA AAGC                 TCTATAAGAGGGAGT  48 7
HC661_RS00600 NONE
HC661_RS00605 NONE
HC661_RS00610  113730 ..  113760 + -12.7  -5.24129   AACCGCGCGGTAAAA      GCGTCTCTGTCATG TTTA CATG-CAGAGGCGC       TTTTTTATAGGCGGA 100 251
        cysE NONE
        cysS NONE
HC661_RS00625 NONE
        rlmB NONE
        rae1  117533 ..  117544 +  -2.2  -2.57013   CGTTTGAAAAGTGGC                G-CCG AGG CGGTC                TGGATTAGGTTGACG  39 6
        sigH  118265 ..  118275 +  -6.8  -4.16904   AATAAGAGAGATCAG                 CCTG TAG CAGG                 TTTCTGTGTCATATT  73 19
        rpmG NONE
        secE  118809 ..  118823 +  -5.7  -5.79595   TGAAAAAAGGATTCA               TAGGC CCTGA GCCTA               TTTTTTGTTTTACAC 100 116
        nusG NONE
        rplK  120025 ..  120054 + -13.7  -3.72027   AATTTGTTTCTTGTC       GGGTTGCGAGTTT TCAC AAGTTCGCAACCC        TTATTCGTGGGAGGT  95 39
        rplA  120959 ..  120980 + -14.5   -4.9792   ATGCTTGTATATACA           GCCTCCATG TCCA CATGGAGGC            TTTTTATATGAAATC 100 180
HC661_RS00670 NONE
        rplL  121995 ..  122015 +  -7.5  -5.43974   TTGCCTGTAGGGGAA            GCTCGCTTT TAT GAGGCGGGC            TTTTTCTTTGCTTTT  93 48
HC661_RS00680  122806 ..  122826 +    -4   -5.8901   TTTGTTTTTGGATGT            GGTTTTCT TAATT AGAAACCC            TTTTTTCTTTTGTCT  90 162
        rpoB NONE
        rpoC  130167 ..  130201 + -13.1   -3.1315   GAATAATAGAAACTG    CTGCAGGAAAGGCTGT TTCG ACAGCTTTTCCT-CAG     TATTACAATTATTCT  91 35
HC661_RS00695  130584 ..  130619 +  -8.6  -4.64763   TTATAGCGTACTTTT    TGTTTTTATATAAGAT ATCA ATCTTGTGTAAAGACA     TTGTTTTTTGCCTAA  87 35
        rpsL NONE
        rpsG  131601 ..  131618 +  -4.9  -3.29471   GAACAAAGCATTTGC             TCACTACC GCT GGTAG-GA             TTCATATAATCAAAA  54 10
        fusA  133797 ..  133814 +  -6.3   -4.0827   TTGTAAGATGAGGAA             GTGAGAG CTTG CTTTCAC              TTTCTATCACTCTAT  69 75
         tuf  135076 ..  135097 + -11.5  -5.95539   ACTCGTTCATTAATG           CGGGGTCCC TTAT GGGGCCTCG            TTTTTTTGTTTCCCC 100 44
HC661_RS00720  136290 ..  136321 +    -5  -4.82901   GAGGTTGCTGACACA      CCCGGCCGCTTTGC CATG GCAAGGTGATCAGG       TTTTTCTCACGGAGA  74 189
        rpsJ  136684 ..  136698 +  -2.9  -2.77523   GAAATCAAACTTTAA               TTCTA AAATA TAGAA               TGATCTTAATAGGAG  42 26
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY  146841 ..  146852 +  -4.4   -3.2794   GAAAAATTAGAGGAC                TGGT TTTA ACCA                 TTCCTCTAAATAAGA  52 31
HC661_RS00835 NONE
         map  148542 ..  148552 +  -5.4  -4.26189   GACAAACGGATAACT                 GAGA TTT TCTC                 TTTTGAAATTTGTCA  67 284
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK  149889 ..  149922 +  -5.4  -3.66666   CTAAACAATGGGGAA     TTTCGGATGGAATC TCATAT GATTCTATTCGAGG      TTTCGACGTTTTGAA  60 138
HC661_RS00870  150899 ..  150918 +  -2.9  -2.55002   GCAAAGACGATTGAT            CTAGTTT CCATGT GAACTAG             GATTTTCGTGTGTTT  41 27
        rplQ  151339 ..  151352 +  -2.4  -2.87132   TCGAATTGGTTTAAT               CACA TATTTT TGTG                TATCTAAAGAAGGGC  41 27
HC661_RS00880 NONE
HC661_RS00885 NONE
HC661_RS00890 NONE
        truA  154759 ..  154769 +    -4  -3.34398   AAAGTTATAAGATAT                 CATA TGG TATG                 TATTTCAACCCCACG  50 75
        rplM NONE
        rpsI  155739 ..  155758 +  -8.6   -5.9667   TTTGGATGGCAAAAA            CCACAACT TCTT GGTTGTGG             TTTTTTTGTATTTTT 100 45
HC661_RS00910  156628 ..  156649 +  -4.3   -5.4477   ATTAAAATATAAAAA           CGGCATCCC GTCA GAGGTGCTG            TTTTTTTGCGGCTTT  86 29
HC661_RS00920 NONE
        cwlD  158447 ..  158465 +  -7.4  -4.60255   CACAGAGAAAGGAGA             CCCTCC CGAGTAA GGAGGG             TTTTTCGCCGATTCT  81 13
HC661_RS00930  159598 ..  159621 +  -8.1  -4.76213   GCTGAATAAAAAAGG          GGCCGGGATC AACAC GG-CCCGGCC          TTTTATTGGCTTTCT  84 32
HC661_RS00940  161018 ..  161044 +  -2.2  -4.56961   TGTTGCTGAATCAGA        GGCGTGCAGCA GAACAA TGTCGC-CGCC         TTTTATATGACTGTT  63 158
HC661_RS00950  163510 ..  163522 +  -6.3  -4.08394   TGCGGCTGGACCACC                TCCTT TCT AAGGA                TTTTAACCGGAATAT  69 18
HC661_RS00955  166645 ..  166662 +  -8.5  -2.96873   TACTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TGGTTTGGTGGCGAT  67 52
         rrf  166811 ..  166825 +  -2.2  -3.03243   CTACCATGTTTTTGT               TTATGA AGC TTATAA               TATTCCGCAGTAGCT  42 55
HC661_RS00965  166884 ..  166932 + -10.9  -3.09516   ATCGGTCGTAGGTTC GAGTCCTACCTGCGGAGCCATTG CTT CCATAGCTCAGCAGGTAGAGCAC TTCCATGGTAAGGAA  78 6
HC661_RS00970  167302 ..  167312 +    -4   -4.8622   ATGCTGTATTCTGGC                 TGTA CAT TACA                 TTTTTACTTGCGGAA  71 347
HC661_RS00975  167400 ..  167414 +  -8.6  -3.38178   TCTTCCGCTCCATTT               TATCCC AAC GGGATA               TTGTGAAATTGATTG  70 29
HC661_RS00980 NONE
HC661_RS00985 NONE
HC661_RS00990 NONE
HC661_RS00995  168069 ..  168095 +    -3  -3.33162   AAACCGGAGGAAGGT        GGGG-ATGACG TCAAAT CATCATGCCCC         TTATGACCTGGGCTA  46 323
HC661_RS01000 NONE
HC661_RS01005  168756 ..  168766 +  -5.4  -4.42235   TAGTAATGCAAGATA                 TCAC GTA GTGA                 TTCTTTTTAACGGTT  70 86
HC661_RS01010  171737 ..  171754 +  -8.5  -2.96873   TACTGTTATCTGGTT             TTGAGAG AACA CTCTCAA              TGGTTTGGTGGCGAT  67 52
         rrf  171882 ..  171902 + -14.1  -5.36441   GCCAAGCTTTCTTAA            CCCAGTTCA TGA TGAACTGGG            TTTTTTATATGAAAG 100 34
HC661_RS01020  173938 ..  173948 +  -5.4  -4.42235   TAGTAATGCAAGATA                 TCAC GTA GTGA                 TTCTTTTTAACGGTT  70 177
HC661_RS01025  176919 ..  176936 +  -8.5  -2.96873   TACTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TGGTTTGGTGGCGAT  67 52
         rrf  177064 ..  177084 + -14.1  -5.36441   GCCAAGCTTTCTTAA            CCCAGTTCA TGA TGAACTGGG            TTTTTTATATGAAAG 100 34
HC661_RS01040 NONE
HC661_RS01045 NONE
HC661_RS01050  181824 ..  181851 +  -9.9  -5.05116   AACTTTTATAAAAGC        GGAAACGGCTC CAGTGA GGGCCGTTTTC         TTTTCTTATTTATAC  93 30
HC661_RS01055  183493 ..  183514 +  -8.7  -5.53288   CATAGAATTTGTGAA           GTCCGGATG AATA TATCCGGGC            TTTTTTTCGGTTAAA 100 36
HC661_RS01060  184559 ..  184578 +  -9.3  -5.08824   GAAGTATGAAAAAAA            CCGCTCA GCTACG TGAGCGG             TTTTTTCCGTACAGC  90 10
HC661_RS01125 NONE
HC661_RS01130 NONE
HC661_RS01135 NONE
HC661_RS01140 NONE
HC661_RS01145  198717 ..  198739 + -10.7  -5.93809   GCTAGCCCAGTCTCA           GACACCTTT TGCAT AAAGGTGTC           TTTTTTTTATCAGCA 100 28
        sigW NONE
        rsiW  200140 ..  200165 +   -12  -5.64274   GACCCGAGTGAAGAT         GAGTAAAGCG TATAAT CGCTTTACTC          TTTTTTTGTGCATCG 100 20
        cdaA NONE
HC661_RS01165 NONE
HC661_RS01170  204289 ..  204308 +  -6.4  -3.63283   AAAAAACATGTGGGA            GGGGAC GATTGAAA GTCCCC             TTGTAATTTGACTTT  64 386
        glmS  206172 ..  206196 + -12.9  -5.14563   GAATAATATATTTAA          CCCCTTTGGTT ATT AGCCAGAGGGG          TTTTTTAATGCGGAA 100 35
HC661_RS01180  208052 ..  208068 +  -5.1  -2.88544   TAACATAAACGAAGA              TGTGCTC TTT GAGCAAA              TGTATCAAAATACGG  50 340
HC661_RS01190  210407 ..  210417 +    -4   -4.4078   TTTTAACGAATTCAA                 TATG ACG CATA                 TTTTAATTAAAAAAG  64 172
HC661_RS01195 NONE
HC661_RS01200  212547 ..  212571 +   -15   -3.8917   TTAACTCCAAGCAGA          CAGCCGCCCG CACAA TGGGCGGCTG          TTCTTCTAATTAAAA 100 94
HC661_RS01210  214776 ..  214797 +    -3  -5.08878   TAAAATGAGAAAAAA           GCTGAC AAATGATGCC GTCAGC            TTTTCTTTATGTGTT  70 38
HC661_RS01230  217722 ..  217733 +    -3  -4.35483   AAAAAACAATTGTAT                TTTC CACG GAAA                 TTTATTATGATGGAA  60 282
HC661_RS01235 NONE
HC661_RS01240  219214 ..  219246 +  -4.7  -3.31461   ACGTATCCAGTATGT      GGCGGGTAAGCTTGG GAA TCATGCTTGCCATCC      TTATGCAAATGGCTG  52 356
HC661_RS01285 NONE
HC661_RS01290  228489 ..  228508 + -11.4  -5.21709   TGTTTCAAATTTAAA            GCTGGCGG TTCT CCGTCAGC             TTTTTTCATGTGCGG 100 27
HC661_RS01295  229462 ..  229483 +  -4.4   -5.4588   AACACATAAAGAAAA           GCTGACGG CATCAT TTGTCAGC            TTTTTTCTCATTTTA  86 44
HC661_RS01305  231688 ..  231712 + -14.3  -2.92246   TTTTAATTAGAAGAA          CAGCCGCCC ATTGTGC GGGCGGCTG          TCTGCTTGGAGTTAA  95 35
HC661_RS01345  239292 ..  239303 +    -3  -4.35483   AAAAAACAATTGTAT                TTTC CACG GAAA                 TTTATTATGATGGAA  60 283
HC661_RS01350  240855 ..  240877 +  -9.9   -4.6902   TGTATAATTCAAAAA           GACACCTCT CTTAC AGGGGTGTC           TTTTTCGGCTTGTCC  93 34
HC661_RS01355  241628 ..  241642 +  -4.2  -3.00946   TGTGCTGAACGTGGA               GCGG AAAGCCG CCGC               TCATTTGTAAGGAGA  47 1
HC661_RS01360 NONE
HC661_RS01365 NONE
HC661_RS01370 NONE
HC661_RS01375 NONE
HC661_RS01380 NONE
HC661_RS01385  247083 ..  247093 +  -5.4  -2.63913   TGAAATGTAATCTTT                 TTCC TTG GGAA                 TCATGTAAAATAGTA  51 67
HC661_RS01390 NONE
HC661_RS01395  247954 ..  247974 + -14.7  -5.38549   CTCCTGTTTTAAAAA            GCCTCCCGG CGG TCGGGAGGC            TTTTTATTGTTTCGG 100 29
HC661_RS01400  248886 ..  248898 +  -6.9  -4.15044   CAATATCTTCGGGAT                GCGGG TTG CCTGC                TTTGTTGACGGGGAA  71 153
HC661_RS01410  250882 ..  250905 +   -11  -5.14563   AATGATTGATAAAAA          CCTTGCGGTA ACAT TCCCGCAAGG           TTTTTTGATCGGGCA  93 39
HC661_RS01415  251996 ..  252017 +  -9.5  -2.94356   GATGAATTATTTTCA           CTCCCTAAG TTTA TTTAGGGAG            TCATATTATTTTAAG  72 39
HC661_RS01420 NONE
HC661_RS01425  253595 ..  253628 +  -5.5  -3.98282   TCCTTTTGTTTGTAA     GGTATCATAGGTAATT CAC AATTACA-GTGATACC     TTTAATTAATATAAA  65 46
HC661_RS01440  256680 ..  256698 +  -8.9  -5.00611   ATCCAGCTATCATAA             GCAGAGA TGCGC TCTCTGC             TTTGTTTTATTTATG  90 56
HC661_RS01460  261820 ..  261839 + -11.4  -5.54907   GTCTATAAAGTTTTA            GCTGCTGC AGCT GCGGCAGC             TTTTTATTTTGTCCG 100 54
HC661_RS01465 NONE
HC661_RS01470  263655 ..  263692 +  -6.5  -5.18561   CGCTCGAATCAGCGC   AAAAGACAGGATAGA GCTTGTTA TCTATCTTGTCTTTA    TTTTTTGAATATTTC  87 12
        purT  264918 ..  264945 +  -5.6  -5.63517   AAAATGATCTTAAAA        GGCGTTTTTACCG TAA TGGTAAGG-CGCC        TTTTTTGTTTGGCAG  93 39
        pssA NONE
HC661_RS01485 NONE
HC661_RS01490  267184 ..  267213 +  -5.7  -5.40625   GCGGAGTCACAGGAG       GAGGCGTCCGCTTT ATA AAAGCTG-CTCCTC       TTTTTTATATGGTGT  89 8
HC661_RS01495  267535 ..  267561 +  -2.3  -4.40237   CTGGAAGAAAGAGTA        CGGACGGAA-AT GTTC ATCTTTCGCCCG         TTTTCCTGTATGATA  59 41
HC661_RS01500  268600 ..  268618 + -10.3  -5.56264   TTGATTAATAGAAAA             GACCACC AATAA GGTGGTC             TTTTTTGTGTTTACA 100 33
HC661_RS01510  271326 ..  271347 +  -9.5  -5.71638   GTATAAATGAAAAAA           GAACCCTTGC GCT GCA-GGGTTC           TTTTTTTGGTTATTG 100 35
HC661_RS01535 NONE
HC661_RS01540  278860 ..  278873 +  -5.9  -3.53811   TTGTCAGCGGAGGCA               GCCGG TAAG CTGGC                TTTGGAAAAGATGGC  58 18
HC661_RS01550  279851 ..  279875 + -18.7   -4.3665   GTTATCCGGCCTTCA          GGCTGTCGAGA AAA TCTCGACAGCC          TTTATGTTTCCCTTG 100 59
HC661_RS01565 NONE
HC661_RS01570  283205 ..  283217 +  -2.7  -3.72576   AAATAACAAGACATA                CATTT AAC AGATG                TTTGCTGGAAGCGAC  50 69
HC661_RS01575  283695 ..  283723 + -12.6  -5.26119   AATATAAGTCTCTAA        GAACAGTTACTG AAAAG CGGTAACTGTTC        TTTTATTTTTCAAGC 100 39
HC661_RS01580  284225 ..  284240 + -10.4  -4.39002   CTTTACAAATAAAAA              GCCCCT TTAA AGGGGC               TTTTATCCGGCCTTT  90 51
HC661_RS01590  285237 ..  285259 +  -9.2  -5.88061   TTTTAATCCCGGGCG           CACCGTTC TGAGAAT GAACGGTG           TTTTTTTAATTTTTT 100 35
HC661_RS01595 NONE
HC661_RS01600  287464 ..  287489 +  -6.8  -4.12532   CTGAATCCTGACATG         GGGGCAGACG AATCCG CTTCTGCCTC          TTTCTCTATAAGGAG  71 37
        tatC  288278 ..  288299 + -14.4  -3.07685   AATATCGTCCTCATG           CGCCGCGG CGGTCA CCGCGGCG            ATTTTGAGCGCTTTT  90 64
HC661_RS01615  290088 ..  290112 +   -10  -4.79352   CGGTATATAAAAAAA          CAGCAGACTC ACGGG GAGCCTGCTG          TTTTCTTATGAGTGA  93 31
HC661_RS01630  293456 ..  293478 +  -6.3  -5.95539   CAATGAGTACTAGGA           GAAGAGAAC CGGGT GTTCTCTCC           TTTTTTTGTTTGCCG 100 28
HC661_RS01635  294305 ..  294330 +  -5.3  -4.54306   TTAACAGTTTCAAAG         CCCCGGAGAAT GAGA ATATCCCGGGG          TCTTTTTTTCTTCCA  71 37
HC661_RS01640  295516 ..  295541 + -10.5  -5.38047   TACACAGCAAAAAAA         CCTTGAAGGGC AAAC GCTTTTCAAGG          TTTTTTCTGTAGATA 100 41
HC661_RS01645  296574 ..  296595 + -11.7  -4.51812   GTGAAAATAAAAAAA           GGAAATAGC CTGC GCTATTTCC            TTTCTTGTTGTCAGG  95 37
HC661_RS01655  299186 ..  299206 +  -5.4  -4.32903   CATTTGTATGAAAAA            GAGCCG CTCTGAATA CGGCTC            TTTTCCCTCTTTGCT  70 83
HC661_RS01660  301183 ..  301193 +    -4  -3.85969   ATTCTGACTGGTCGT                 TTCA TGA TGAA                 TTCTCTCTTTCTTTA  57 521
HC661_RS01670  302428 ..  302455 + -10.6  -4.97666   GCATAATGAAAAAAA        GAACGAGGGAGC TTCG GCTTCATCGTTC         TTTTTATGATCTCTT  93 35
HC661_RS01675  303616 ..  303632 +  -5.9  -2.57564   TGCTCCCCATTAAAA              TGGAATT AAG AATTCCG              ATTGTCAGCCAATGA  51 331
HC661_RS01700  308085 ..  308107 + -11.3  -3.40331   ATATGTGATAGGACT          CCCCCGTCCA TACA TGG-CGGGGG           CTTTTTAGGTAAATT  85 40
HC661_RS01705  309217 ..  309242 + -14.1  -4.03234   ATTGGTTAAATAACA         TAGTGTGCGCC GCGG GGTGCACACTA          TTTCTATGCGGGAAA 100 28
HC661_RS01710 NONE
HC661_RS01715  310754 ..  310799 +   -22  -5.75342   AAGAACGAAAAAACC GCCGTTAAGCGGTGCAGCAG TCTCAT CTGCTGCTCCGTTTGACGGC TTTTTTTTACAGAAA 100 18
HC661_RS01725 NONE
HC661_RS01730 NONE
HC661_RS01735 NONE
HC661_RS01740  314711 ..  314733 +  -6.3    -5.252   GAATAAAACAAAAAA           GGAGGGAGA GTTCA TTTCCTTCC           TTTTTTGTACCGATC  87 35
HC661_RS01745 NONE
HC661_RS01750  317498 ..  317522 +  -9.9  -5.40072   AAGAATTAACACACA          CCCCGCTTGCT TAC GGCGAGCGGGA          TTTTTTTGCGAAAAA 100 32
HC661_RS01755  318810 ..  318826 + -10.1  -5.52986   GAGCTTGCGCAATGA              GCACCCT TTT GGGGTGC              TTTTTTTAGTGAGCT 100 26
HC661_RS01760 NONE
HC661_RS01765 NONE
HC661_RS01770  322187 ..  322206 + -10.7  -5.71983   AAATAACGAAGAAAA            GCAGCCC TGTAAC GGGCTGC             TTTTTTTATGCTTCA 100 35
HC661_RS01780 NONE
HC661_RS01785  325468 ..  325491 +  -6.8  -5.95539   AAAAGAAATAAAAAA          GAAATCATCT TGAC AGGTGGTTTC           TTTTTTTGTTTGAAA 100 13
HC661_RS01790  327781 ..  327809 + -19.1  -3.30771   CTGAAAAGATGACAG        CATCCTAAAACGG GTT CCGTTTTAGGATG        TTGTCAACAATCTGG 100 117
HC661_RS01795  328923 ..  328950 + -12.8  -5.16572   AGAGTAAACAAAAAA        GCAGTACATGAC AAAC GCCATGTACTGC         TTTTTTCAATTCGCT 100 34
HC661_RS01805 NONE
HC661_RS01810 NONE
HC661_RS01815  332594 ..  332611 +  -8.4    -5.626   ATAAGCTATGATCCG             GCAGGG CTGTGT CCCTGC              TTTTTTTGTACGATC 100 37
HC661_RS01825 NONE
        nadE  335598 ..  335617 + -12.2  -5.85425   ATAGAATAAAAAAAA            CCTCCCTT TTGA AAGGGAGG             TTTTTTGTTTATTTC 100 37
HC661_RS01850  339121 ..  339140 +  -3.6    -3.484   CTTTCATTGCATTAT            CTCTATAT TTCA ATATTGAG             TTATCATATAATAAA  50 79
HC661_RS01855  339759 ..  339782 + -13.2  -5.93252   GCCGATGTAAAAAGA          GCCGTGACGCT GTG AGCG-CACGGC          TTTTTTGTTTTTAAA 100 31
HC661_RS01860  340863 ..  340878 +  -4.6  -5.02074   TGACGACAGCGAAAA              GCCCAA GTAC TCGGGC               TTTTTTCAGGAATGA  76 38
HC661_RS01865  341699 ..  341713 +  -5.7  -3.66095   GAAAAAGGCGGAAAT               TGACG ATTGC CGTCA               TTTCCGTCCGCCTTT  60 23
HC661_RS01870 NONE
        pruA  344377 ..  344404 +   -12  -3.57263   TTAAGAGGGACTGAA        TGGGCATCCTCC TCGC GGGGGGTGTCCA         TTTCACCATAAACAT  89 37
        putP  345913 ..  345940 +   -15  -4.11216   AAAAGCAAGGAACGA        GAGGAAGAAGGG ACCG CCCTTTTTCCTC         TTTTCACGATACAGG 100 39
HC661_RS01885  347297 ..  347320 +  -9.7  -2.50381   AAAAGAGATAAAAAA          GAAACCAGT CGCCGT ACTGGTTTC           AGTTTTAATACCTTC  70 30
HC661_RS01890  348970 ..  348983 +  -5.9  -2.53911   GTCAGTTCCGTCTTT               GCGGC CTCA GTCGC                TGCATTCAGGCTTGC  50 496
HC661_RS01920  358792 ..  358811 +  -5.7  -5.38249   TAAGTTTGGGCGGAA            GACACGT ATGACA GCGTGTC             TTTTTTATGATTGAT  89 38
HC661_RS01925 NONE
HC661_RS01930 NONE
HC661_RS01935  361811 ..  361828 +  -9.9  -5.81412   CGAATCGATTGAAAA             GAGCGAA TAAT TTCGCTC              TTTTTTTTGCATAAA 100 16
HC661_RS01940  362217 ..  362236 + -13.6  -5.98675   CATCATCATTCTTAA            GCATCCGG CAAG CCGGATGC             TTTTTTGTTTTTATC 100 26
HC661_RS01945  363762 ..  363789 + -14.3  -3.42228   AAGTTTATAAAAGTT        CCCTGAGAGAA ATAAGA TTCTCTCAGGG         CTTTCTTTTACATTG 100 31
HC661_RS01970  366796 ..  366818 +  -4.9  -5.49809   AGGAATCTTTTTGAA           GTGCTCTAT GTAAA ATAGAGTGC           TTTTTTTGCGGTTTA  87 27
       srfAA  378211 ..  378244 +  -7.5  -3.25015   CACCGATGCAGGAGG     GAATGCTGTATCATGC GCT GCTTGATCC-GCATTC     TTCCTCCTACTTCAC  63 99
       srfAC NONE
       srfAD  393550 ..  393569 + -12.2  -5.24129   TGTTATAGGAGATGA            CAGACAGC ATTC GCTGTCTG             TTTTTTGTAACAAAA 100 33
HC661_RS01995  394973 ..  395006 + -13.4  -4.90381   CGGAAATATCAGGCT     GACAAAAAAGGAGGG GGACA CCCTCC-TTTTTGTC     TTTTATTCTGTTACA 100 24
HC661_RS02010  398140 ..  398151 +  -4.4  -4.49556   GCCCTTTTCCGGCCT                GCTT GATA AAGC                 TTTCTTTCATCGACC  68 229
HC661_RS02045  403380 ..  403399 +  -2.9  -3.07283   AACAAAAAGGAGGAA            TCTGATA ATGGCC TATCAGG             ATTTTAGGGAATTTC  43 21
HC661_RS02050 NONE
HC661_RS02055 NONE
HC661_RS02060  405523 ..  405554 +   -16  -4.28067   ACAATAGACGCATCA      AAAAAGCCTGCGGA CGAT TCCGCAGGCTTTTC       TTTATCTGTTATTGA 100 34
HC661_RS02070  409152 ..  409164 +  -3.3  -4.13963   CACAATACAGCCGTG                CGCCT GTC AGGCA                TCTTTTTTACCGGAT  59 112
HC661_RS02085  412335 ..  412348 +  -2.3  -2.70525   TAATCCTCTCTCAGA               CAAGC TTGA GCATG                ATTGATTTGAGGAGA  40 7
HC661_RS02090  413497 ..  413514 +  -9.8  -5.02074   GTTTCGAAGAAATAA             CCCGGC CGGTGC GCCGGG              TTTTTTAAAAAATCA  93 26
HC661_RS02095 NONE
HC661_RS02100 NONE
HC661_RS02105 NONE
HC661_RS02110 NONE
HC661_RS02115 NONE
HC661_RS02120 NONE
HC661_RS02125  420295 ..  420319 + -10.7  -4.75776   TGATATAAATAAAAA          GAGCGGGGG GATGCAG CCCTCGCTC          TTTTTACGTTCACTT  93 33
HC661_RS02140 NONE
HC661_RS02145  424844 ..  424865 + -10.8  -3.52162   GAATCATCTTGAAAC           CGGCGGTC CCGTCT GGCCGCCG            TCTGTTTTATCTCCA  82 29
HC661_RS02150 NONE
HC661_RS02155  426272 ..  426298 + -13.1  -5.40072   CTGAACAAAGGAAAA        GACTGCCTGGGA ATGT TCCC-GGCAGTC         TTTTTTTGCGCGGCC 100 53
HC661_RS02170 NONE
HC661_RS02175 NONE
HC661_RS02180 NONE
HC661_RS02185  431975 ..  432002 + -16.4  -4.98531   CGAGAAGTAAAAAAA        GAACCCGGTCAC ATAC GTGATCGGGTTC         TTTTTGGTTTACCGC 100 31
HC661_RS02210  436001 ..  436017 +  -7.2  -5.60993   CCGCTGGTAAATAAG              TCCCCG AATTC CGGGGG              TTTTTTTATGCGCCG 100 31
        gabT  438868 ..  438881 +  -4.5  -2.79501   ATTATTGGAATGCCG               GCGGA TGTG TCTGC                TATCATGAAAGTGTG  48 46
HC661_RS02225  440355 ..  440378 + -12.4  -5.06816   AATCAGCCGAAAAGT          AAGCCCCGCT TCTA AGCGGGGCTG           TTTTTATTGAGCAGT 100 39
HC661_RS02230 NONE
HC661_RS02235  442176 ..  442205 +  -9.4   -4.8622   GATAAGAAAAAAAAA      GCGATCGCAGGCTC TTTA GAGCC-G-GATCGC       TTTTTGCTTACGCGC  93 36
HC661_RS02255  445589 ..  445608 +  -8.6  -6.09888   TACAGAAAGCGGTAA            GACACCTT TGAT GAGGTGTC             TTTTTTTTGTTAAGG 100 26
HC661_RS02260 NONE
HC661_RS02265 NONE
HC661_RS02270  448793 ..  448812 +   -15   -5.5074   ATCAATAAAAATGAA            CCCGCGTC GGGG GACGCGGG             TTTTTTCTTGCGTTA 100 33
HC661_RS02275  449255 ..  449272 +  -9.8  -3.53224   GCCATCGTAAAAAAA             GCCGCC TCCAGC GGCGGC              TTTCGGACAAGCCTG  77 31
HC661_RS02285  450339 ..  450361 + -13.5  -5.86976   TTATAATAGAAAAAA           GAGAGCCTC TGGAT GAGGCTCTC           TTTTTTGTTTTGTCA 100 35
HC661_RS02290 NONE
HC661_RS02295 NONE
HC661_RS02300 NONE
        pxpB NONE
HC661_RS02310 NONE
HC661_RS02315  455848 ..  455858 +    -4  -3.28745   CCGCTGCACAGTATA                 TTTC TGA GAAA                 TTGGGTTATTGACCG  50 3
HC661_RS02320  456579 ..  456605 +   -13  -4.33105   CGCCGGCTCATAACC         GCGCGCTCCT TTTCATC GGGAGCGCGC         TTTTCGTGCTCCTTA 100 28
HC661_RS02325  457070 ..  457086 +  -2.1  -4.61147   CATTCCTGATATTCC              GGCGATC CGC GAAAGCC              TTTTATATGATCTTC  63 108
HC661_RS02335 NONE
HC661_RS02340  460461 ..  460492 + -23.2  -4.11404   ATTCCATAAACAGAA      CAAACGCCCGGAAG CTAT CTTCCGGGCGTTTG       TTTATGTGGTGTGCA 100 32
HC661_RS02350  464588 ..  464604 + -13.7  -5.83226   AATTGAAAACAAAAA              CCCGGCT GCC AGCCGGG              TTTTTTTCTTGCGTT 100 39
HC661_RS02355 NONE
HC661_RS02360  466111 ..  466131 + -11.2  -5.71712   ACCCGCGCATTTAAG            GATGAGGC TGCAC GCCTCATC            TTTTTTTGTATGGAA 100 27
HC661_RS02365 NONE
HC661_RS02370  467650 ..  467670 + -10.4  -5.71712   AAGAATAAGACAAAA           CCGCTCCGG ACAT CCGG-GCGG            TTTTTTTATGTAACC 100 426
HC661_RS02375  468571 ..  468591 + -11.2  -5.52023   TAACGCATGAAAAAA            GCTCCTCT GCAGA AGAGGAGC            TTTTTTATTGATAAT 100 38
HC661_RS02385  469512 ..  469530 +  -2.4  -2.82623   AGGGAGCGTGAGGAA             GTCTGTTA TAA TAACAGGA             TGATTGTGAAAGAAA  41 41
HC661_RS02390  471757 ..  471782 +   -12   -5.0095   AATAGATCAGAGAAA         GGCAGCATTT GTAAAG AAATGCTGCC          TTTTGTTGTGTTTTT 100 36
HC661_RS02395 NONE
HC661_RS02400 NONE
HC661_RS02405 NONE
HC661_RS02410 NONE
HC661_RS02415  478983 ..  479001 +  -7.4  -6.18768   GTAATGATGGAAAAA             GAGGCC GTTCACA GGCCTC             TTTTTTTTGTATTTT 100 37
HC661_RS02420  481238 ..  481262 +  -9.3  -5.24129   AAAAGTAACGGCAAA         GACCGCAGGC TAAAAT GCC-GCGGTC          TTTTTTGTAAAGGAG  93 33
HC661_RS02425 NONE
HC661_RS02430  483531 ..  483553 + -13.6  -6.08342   GGCGCTTTTAAAAAA           TAAACAGGCA GCA TGCCTGTTTA           TTTTTTTGTTTGTTG 100 47
HC661_RS02460  488593 ..  488606 +  -6.7   -5.4505   TCTACCATCGCATTC               GCGAT TTCG ATCGC                TTTTTTCTTCACAGG  93 221
HC661_RS02480  490485 ..  490507 + -12.2  -4.43877   GATAAAAAACCGCCC           GAAAACACAT TCA ATGTGTTTTC           TTTGTTTAGCAGTTC  95 39
HC661_RS02485  490974 ..  491011 + -19.4  -4.09511   CAGACAACCTGCAGA   TCAAAAGCGATCCGGC GCATCA GCTGGATCGCTTTTGA    TTTTGGGAAAATCTT 100 56
HC661_RS02490 NONE
HC661_RS02495  491777 ..  491799 +   -15  -3.78419   GAAGGCATAATGAAA           GCCCAAAACA GTT TGTTTTGGGC           TTGTGTCTTTACTCG 100 31
HC661_RS02510 NONE
HC661_RS02515 NONE
HC661_RS02520  497490 ..  497516 + -16.7  -5.40072   GGTATAAAAGGAAAG         GAACGGCATGC ATCGG GCATGCCGTTC         TTTTTTTCGGCCGCC 100 34
HC661_RS02525  498765 ..  498786 +    -8  -5.13354   ATGTTATAATGCAGA           CAGTGCCT ATGTAC GGGCACTG            TTTATTTTTTGTGAA  88 74
HC661_RS02530 NONE
HC661_RS02535  500480 ..  500491 +  -2.2  -3.07962   CGCTTGGTGGAGCTT                TTGC AAAC GCGA                 TGTTCGGGTATAAAG  42 1
HC661_RS02540  500936 ..  500959 + -11.8  -5.60993   CGGAAGCAGTCTGAA          CGCGCTATTC CATG GAATAGCGTG           TTTTTTTGTACAGCC 100 27
HC661_RS02545  502201 ..  502217 +    -8  -5.04597   GAGCAATAAAAAAAA              GAGCCT GAAAA AGGCTC              TTTTTATGTATGGCT  88 32
HC661_RS02560  503689 ..  503705 +  -2.2  -4.66535   GGCGTTTTCGCGTTT              GCGC TGTGAAGAT GCGC              TTTCTTTTCGCCGTT  67 74
HC661_RS02570  505202 ..  505225 + -13.2  -4.13767   ATTTTAATGAAGACG          GACACTGCCT GAAG GGGCAGTGTC           TTTTCCCGTAACAGA 100 34
HC661_RS02575  506892 ..  506914 +  -6.3  -4.77438   TGTATACGTATGATC           CTGTCCTTT GGATG AAAGGGCGG           TTTTTAGTGGTAAAT  80 277
        cshA  508467 ..  508490 + -12.4  -6.19443   ACTAAAACACAGGAA          GCGGACCCTT TTAC GGGGGTCCGC           TTTTTTTTTGATATG 100 36
HC661_RS02585 NONE
HC661_RS02590  510499 ..  510519 +    -9  -5.52384   TATTCATATGAAAAA           GCGGACGGT TAAT ACCG-CCGC            TTTTTTTGCTGCACG  95 14
HC661_RS02600 NONE
HC661_RS02605  512747 ..  512767 +  -8.9  -5.29385   AATAACGTCAAAAAA            GAGGCCGCC GCT GTCGGTCTC            TTTTTTGATTCCATT  93 36
         alr  514074 ..  514087 +  -3.9  -2.91912   TGCTTGACGTTTGAA               TAATG GTAT CATTA                TGTCTGGATGGATGA  46 77
        endB NONE
        ndoA  514790 ..  514808 +  -8.9  -6.09196   TTTAGTCATATTTTG             GTTGCTC ATATA GAGCAAC             TTTTTTTGTTTTCGA 100 36
HC661_RS02625 NONE
        rsbS NONE
HC661_RS02635  516472 ..  516484 +  -5.5  -3.06133   GGAACAGAGATTCAA                GCCGT GAA ATGGC                TTCGGTAGGAGGTTA  53 5
HC661_RS02640 NONE
HC661_RS02645 NONE
        rsbW NONE
        sigB NONE
HC661_RS02660  519724 ..  519745 +  -6.6  -5.80817   GACCTATATTCTCGG           GCAGCTTT TATCGT AAGGCTGC            TTTTTTTATGTTCCG 100 10
HC661_RS02665  521975 ..  521992 +  -9.9  -5.71712   ATGGTAAAATAAAAG             CACTGCT TACG AGCAGTG              TTTTTTTCTGTAGAA 100 29
HC661_RS02675  522687 ..  522703 +  -6.6  -3.00946   GTTAAATTATAAAAG              TCGTTG AGAGA CAACGA              TACTTTCTCAAAAAA  59 69
HC661_RS02680 NONE
HC661_RS02685 NONE
HC661_RS02690 NONE
HC661_RS02695  523134 ..  523148 +  -2.2  -2.74605   AGCCCAGCCATTTTA               TTTAAA AAT TTTGAA               TCACTTTTAGAGCGA  40 31
HC661_RS02700 NONE
HC661_RS02705  523341 ..  523357 +  -5.1  -2.64765   CACTTTCTTTTCAAA              GTGCTGA TCA TCATCAC              TAGCTTATATGCTTA  49 39
HC661_RS02710  523487 ..  523513 + -10.3  -5.73339   CGGCCGCATCAATGA         TACCAAGGATT ATAGA GATCCTTGGTA         TTTTTTTGTGCTTAT 100 33
HC661_RS02715  524847 ..  524866 +  -2.2  -4.16943   AAGGTCGCCTTCAGC            TGCC-ATTG CTT TAATTGGCA            TTTTGAAATCTGGGA  57 412
HC661_RS02730 NONE
HC661_RS02735  527873 ..  527886 +  -3.9   -3.9344   CGGATGGTATAACTA               TTCAT AAAT ATGAA                TTTACTGTTACAATT  57 29
HC661_RS02740  529151 ..  529166 +  -4.8  -3.04415   GCATGCTTGGACCGT              TTATAC GCTT GTATAA               TGTGATTTGATAATC  51 142
HC661_RS02745  530854 ..  530882 + -11.8  -5.64321   AAGAAGCTTTGTTAT        GCCAGTTCTTCT CCCGA AGGAGAGCTGGC        TTTTTATTTTCTTAT 100 275
HC661_RS02755 NONE
HC661_RS02760  532401 ..  532421 +  -8.3  -6.08342   TCATCTTAATTAATT            GAGTGGACT TTG AGTCTGCTC            TTTTTTTATTTGTTC 100 105
HC661_RS02780  534564 ..  534593 + -10.1  -3.44622   TGAGTAGAAACAAAG       GGTGCCATTAGTG TCAT CGCTAATGGTATC        TTCCTTCTAAGAATG  79 46
        cspC  535479 ..  535500 +  -4.4  -5.84432   AATCGTTTATACAAA           CAGGCTCT TTATAT AGGGCTTG            TTTTTTTATGTTCTC  95 46
HC661_RS02815 NONE
HC661_RS02820 NONE
HC661_RS02825  541449 ..  541471 + -13.5  -4.64598   AAAGTTGGTACAGAA           GGATGCTGC AGCGC GCAGCATCC           TTTTTACGCTGCTTA 100 56
HC661_RS02830  542209 ..  542240 +  -3.9   -6.4275   AAAAAAGGCAGGAGA     GACAAGAGTTTCGGCA GCT TGCCG---CTCTTGTC     TTTTTTTTGTTTTTA 100 260
HC661_RS02835  543747 ..  543768 +  -8.7  -4.99861   GAAACAAATAAAAAA           CACACCAGA ACAT TCAGGTGTG            TTTTTATCGTTGCTA  90 55
HC661_RS02845 NONE
HC661_RS02850  546456 ..  546482 +  -6.7  -5.48063   CGGATAGACAGAGGA         GAGCAGTAA CTTACGTGT TTACTGCTC         TTTTTTGTGTTGAAT  93 34
HC661_RS02860  548404 ..  548423 +    -5  -2.89421   CATTTGTTTAGCTTT            ACATAAGG GAAA CCTTATGA             TATGGTGATTATTGC  50 148
HC661_RS02865  548668 ..  548687 +  -8.6  -5.64274   GTTATTTAAGCGTAA            CACCGATA ATTG TGTCGGTG             TTTTTTTGTGCCTGA 100 65
         cfr  549866 ..  549884 +  -3.2  -2.68015   GACTTCATATTATTT             CATTTGAT AAC ATAAAATG             GTTATCGTGATTGAA  43 62
HC661_RS02875  550536 ..  550560 + -14.4   -4.8743   CTTATCTATATTTAA          GCCACTTTCC ATAGA GGAAAGTGGC          TTTATTTATTTTGAA 100 242
HC661_RS02880 NONE
HC661_RS02885 NONE
HC661_RS02890 NONE
        thiD NONE
HC661_RS02900  554982 ..  555006 + -12.9  -5.26875   GCCGCGTTCCAAAAA          CACCAAGTGTC ACA GACCCTTGGTG          TTTTTTAATTCCGGC 100 112
HC661_RS02905  556070 ..  556091 +  -7.4  -5.38951   TTGAACTGAAAAAAA           CATACCAA CAAATA TTGGTATG            TTTTTTATGTCGATT  93 49
HC661_RS02915  557757 ..  557776 +    -5  -6.14618   GCCGCATGAAATGTA            CCAAGG GAAACGAG CCTTGG             TTTTTTTATTTTCTA 100 64
HC661_RS02920  559236 ..  559251 +    -6  -5.69793   ATACGAAATGAAAAA              AGCGCC GTTC GGCGCC               TTTTTTCTTTCATGT  95 30
HC661_RS02930  561397 ..  561418 +  -8.1  -5.11033   CAAGCATGTTAAAAA           CATACCGGCA GCA TGC-GGTATG           TTTTTTCAGGTTATG  88 41
HC661_RS02945  564077 ..  564111 + -20.3  -2.89569   TGGGCGGAATATAAT     GAAAAGGCCGAACAA GTTCA TTGTTCGGCCTTTTC     TGATTGATTTGCGAA 100 86
HC661_RS02955  566632 ..  566645 +  -2.3  -4.69664   TCATTTGTGTTCCAC               GGGTG ATAC CAGCC                TTTTTCCATCATATA  67 164
HC661_RS02985 NONE
HC661_RS02990  571135 ..  571154 +  -7.2  -6.02914   GAAAAACTGCCCAAA            CGTACATG CCCC TATGTACG             TTTTTTTTATGTGAA 100 42
HC661_RS02995  573380 ..  573398 +  -9.6  -5.74122   GAATAAAATGAAAAA             GCAGATCG TTA TGATCTGC             TTTTTTTATGTGCTG 100 35
HC661_RS03020  579102 ..  579124 + -17.8  -5.41746   CCGCGTGACCCAGAC           CCAAGGGCTG TTA CAGCCCTTGG           TTTTTTTGCGCCCTT 100 50
HC661_RS03025  580428 ..  580447 + -10.8  -5.52384   GGAGAAAGCAAAAAA            GGAGTGAA ATGA TTCACTCC             TTTTTTTGATGCCCG 100 19
HC661_RS03035  582660 ..  582679 +   -15  -3.85165   GAAGAACAGAAAAAA            CGGGAGGC GGCC GCCTCCCG             TTTCAGTTTAAAATA 100 39
HC661_RS03055  585478 ..  585489 +  -3.6  -3.51329   GGGTTGTCAAACCGG                GCGG CAGA CTGC                 TTCTCATTGACAATA  50 476
HC661_RS03070  587821 ..  587843 +  -5.6  -5.76949   CGCATCATCACGATA           GACAAGGT GAAAAAA GCCTTGTC           TTTTTTTTGCCGATG 100 25
HC661_RS03075  589171 ..  589200 + -11.6  -4.92783   TAATACATGGAAAAA       GCCTGTTTCCTCT GCCAA AG-GGAAACAGGC       TTTTTATAATGGCTT  95 38
HC661_RS03085  589998 ..  590012 +  -7.1  -2.81642   ATCAAACCCCCGCGG               CTGCC TGAAC GGCAG               TATACTGACTGGTGT  60 50
HC661_RS03090  591710 ..  591720 +  -2.6  -3.25072   GATGAGTTCCCCCTA                 TTAT CTG ATAA                 TTGAATTATACTGCA  44 267
HC661_RS03100  592471 ..  592490 +   -10  -5.07567   AAAAAGACCGCCAAA            GCCGAAGG AACT CCTTTGGC             TTTTTTGCGGTCTCA  93 39
HC661_RS03110  594728 ..  594748 +  -6.9   -5.7946   CATAAAAGCGCCGAA            GAGTGAG AGAAAAA CTCACTC            TTTTTTTGTTGCCGC 100 36
HC661_RS03115 NONE
HC661_RS03120  596735 ..  596759 + -12.2  -5.63517   AACAGCATAAAAAAA          CAAAGGGCCC GTTTA GGGTCCTTTG          TTTTTTATTTAAAAA 100 31
HC661_RS03155  602574 ..  602594 +    -9  -4.26589   GAATAAATCAAAAAC            CCCCCAAT CAGCA GTTGGGGG            TTTTCAATATATAAT  85 35
HC661_RS03160  604424 ..  604445 +  -8.7  -5.82036   GTAATCTGAATAGAC           GCGGGGTTC CTAG GAATCCTGC            TTTTTTATTTATTAT 100 37
HC661_RS03165 NONE
HC661_RS03170  604954 ..  604970 +  -2.3   -3.8709   CGCACAGCGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  51 105
HC661_RS03175  606733 ..  606743 +  -5.4  -4.42235   TAGTAATGCAAGATA                 TCAC GTA GTGA                 TTCTTTTTAACGGTT  70 235
HC661_RS03180  609714 ..  609731 +  -8.5  -2.96873   TACTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TGGTTTGGTGGCGAT  67 52
         rrf NONE
HC661_RS03190 NONE
HC661_RS03195  610097 ..  610115 +  -8.9  -4.84146   TTTTAAATGCTGGCA             GCTTGGT ATCTA ACCAAGC             TTTCTTTTATATCGT  90 89
HC661_RS03200 NONE
        tsaE NONE
        tsaB NONE
        rimI NONE
        tsaD  613841 ..  613864 + -11.8  -6.00814   TAACATCCTTTGATC          GTCTCACGTT GTAA AACGTGAGGC           TTTTTTTTACTTATT 100 12
        moaC NONE
HC661_RS03235 NONE
HC661_RS03240 NONE
        tatC  618257 ..  618292 +   -15  -5.16681   GACGTATCAGCATAA    AAAAAGCCATTTCTCA ATGA TGAGAAATGGCTTTTC     TTTTATTATTTTTGA 100 26
HC661_RS03260 NONE
        groL  621615 ..  621638 + -15.4  -3.63782   TTATTGGCTAAAAAA          GAAAGGCCCT GTTA AGGGCCTTTC           TTTAAGCTGCTGTTG 100 223
        gutB  626774 ..  626795 +  -6.6  -3.29325   ATCGCTGAGTGAACG           GGGAGGAT CTTTGC ATTCTCCC            TCTTGCTTATCAAAA  62 33
HC661_RS03285 NONE
HC661_RS03290  629287 ..  629329 + -13.7  -4.48299   TCACTGTAAAGTATG GAGGATGTTTCTTGAAAGTC ATCG GACTT-CGGGAAGCATCCTC TTTATTTAGGTCTGA 100 32
HC661_RS03295 NONE
HC661_RS03300 NONE
HC661_RS03305 NONE
HC661_RS03310 NONE
HC661_RS03315  633515 ..  633533 +  -8.8  -5.67967   ACGATATACGAAAAA             GAGGCCTT TTG GGGGCCTC             TTTTTTTGTCATGAT 100 40
HC661_RS03340  639083 ..  639102 +  -4.3  -4.98255   AGACCATCTTAAAAA            GCAAGGA CACTGA TTCTTGC             TTTTTCTGATTGACG  74 44
HC661_RS03345  640184 ..  640203 +   -10  -5.14563   AATCATGAAAAAAAA            CACTCAGC GCCC GCTGGGTG             TTTTTTAATGAACAA  93 33
HC661_RS03370  645173 ..  645192 +  -8.6  -5.54079   TCAAGCTGAAATAAA            GCTTCCTT TCTA AAGGGAGC             TTTTTTCCTTTTTCG 100 27
HC661_RS03375 NONE
HC661_RS03380 NONE
HC661_RS03385 NONE
        guaA  651396 ..  651432 +  -9.6  -5.86976   GGGAATAGTCAAAAG    AAGCTTAGAATCCTTG GTTTA TAAGGGTTCTAAGCTC    TTTTTTCTTTTATAG 100 33
HC661_RS03400 NONE
HC661_RS03405  654620 ..  654645 + -11.9  -4.77157   ACGGAAAATGATGTC         TGGAAGGCGGC TTTT GCTGTCTTCCA          TTTTTGGTCAATTAA 100 30
HC661_RS03410  656303 ..  656320 + -12.7  -5.98675   GAAATAACGGAAAAA             CCGGCTG AGGA CAGCCGG              TTTTTTGTTTTTGTC 100 34
HC661_RS03415  657283 ..  657295 +    -2  -3.38603   TTTATAAGTCGAAAT                TTGT CTTTC ACAA                TGTTTACAAATATTT  45 34
        fbpA  657600 ..  657619 +  -5.6  -6.34616   GATAAGAGCTTGAAA            GTCTGCCT TGCG GGGCGGGC             TTTTTTTTCTTTTGA 100 39
HC661_RS03425 NONE
HC661_RS03430  658684 ..  658727 + -12.5  -6.22802   CGATACGCGCGCCAT GCCCGGTTTGTATTGCTTC CTCATA GTTGCAATATAAGCCGGGC TTTTTTTTTCTGAAA 100 253
        purE NONE
        purK NONE
        purB  661695 ..  661706 +  -7.2  -3.61517   TTATAGAAGAAGCCA                GCCG GAGG CGGC                 TTCTTCAGCCGCCAT  66 35
HC661_RS03450 NONE
        purS NONE
        purQ NONE
        purL NONE
HC661_RS03470  667052 ..  667073 +  -5.7  -4.40605   TGAAAATGACATAAA           GGCAGCGGG AATT CAGGCTGCC            TTTCTCTTTCTGCCT  70 45
HC661_RS03475  668143 ..  668153 +  -2.4  -3.44848   GAAGGCATTTCTTTC                 GGCG GTG CGGC                 TCTTTCATGAAAAAG  47 5
        purN NONE
        purH NONE
        purD  671716 ..  671738 +   -15  -5.15167   ACAGGAGAAATTAAA           TAACAAGCCG AAA CGGCTTGTTA           TTTTTCTTGCTGATG 100 175
HC661_RS03500 NONE
HC661_RS03505 NONE
HC661_RS03510  675169 ..  675193 + -13.6  -5.96219   CAGCTACGTAAAAAA         CCGCTCTGCCG ATGA CGGCAG-GCGG          TTTTTTTTATGCGTG 100 30
HC661_RS03520 NONE
        pcrA NONE
        ligA NONE
HC661_RS03535  683188 ..  683215 + -10.7  -5.88565   CGATTAACCAAGATG        CCCTTGTTCAT TTCTGT ATGAGCAAGGG         TTTTTTTATTGTGAA 100 34
HC661_RS03540  684422 ..  684444 + -11.3    -5.626   GTATAAATAGAAAAA          CGCC-GGCTG AATC CAGCCCGGCG           TTTTTTTATAGCGTA 100 35
        gatC  687462 ..  687472 +  -5.4  -2.99704   GGATTAAAGGAGGGA                 GACA GTA TGTC                 ATTATTTGATCACAA  53 34
        gatA  689072 ..  689086 +  -3.4  -4.07568   TCGACCTCGGCTATC               CCGGCG TGC TGCCCG               TTTTGAACAAAGAAG  56 172
HC661_RS03575  694561 ..  694590 +   -15  -5.55769   AAGAGTAAGACAGCG       GGCCTTGGCTCC TTAAAC GGAGCCGGGGCC        TTTTTTCTTCTGGCA 100 33
HC661_RS03580  695624 ..  695662 + -16.4  -2.79004   GATGATTAATACGCG   GACAAAATCCTAAAAC AGTATTC GTTTTAGGATTTTGTC   ATCTTTTCAGCGTGA 100 32
        rlmD  697279 ..  697312 + -14.1  -2.51547   ATACATCTCTTTATG     TAATAAAGGGTACCT TTTT AGGAACCCTTTATTA      ATATTCATCTAGAGG  93 154
HC661_RS03595 NONE
HC661_RS03600  700011 ..  700041 + -14.1  -5.04733   TACATAACGATGTAA       CAGGCAGCATCCG TTTAC TGGATGCTGTCTG       TTTTGTTTATCATTA 100 54
HC661_RS03625  704336 ..  704360 +  -8.5  -5.54338   GAATAAAGACAAAAA          GGCCGGGGC GGCATAA GTTCCGGCC          TTTTTATTTTGCTTA 100 35
HC661_RS03630  704808 ..  704829 +  -8.8  -5.61596   CCATTCGGGAAAAAG           CACTCTTG GAACAG CAAGAGTG            TTTTTTTGTGACCGT 100 41
HC661_RS03635 NONE
HC661_RS03640 NONE
       cotJC  706021 ..  706042 +  -6.5  -5.75822   AGAAAATTTTTTAAA           CGGCCCTCA AACA TGACGGCTG            TTTTTTTCCTTTCTG 100 27
HC661_RS03650 NONE
HC661_RS03655  706966 ..  706981 +  -8.2  -5.80248   GCAGAAGTGAAAAAA              CGCGGC CGCG GCTGCG               TTTTTTTGTGTGTTG 100 41
HC661_RS03660  707757 ..  707781 +  -9.4  -4.78157   GAGAAAAAATGAAAA         GAGCA-TTGCC CTGG GGCAAATGCTC          TTTATTATTTTTCGT  93 29
HC661_RS03675  709594 ..  709617 +  -8.8  -5.60993   AAGCATAGGAAAAAG          GTGCTCCGGCC AGA GGC-GGGGCGC          TTTTTTTGTCAGCGG 100 33
HC661_RS03680  710097 ..  710123 +  -2.2  -3.53012   CCAATGACAGGAGGC         GGTACATATGAA GCA TTCAACTGTTCC         TTTCCGGGAGAGCCG  47 48
HC661_RS03685 NONE
HC661_RS03690  711155 ..  711177 + -12.6  -4.87052   TAACCGCGCGAAAAA           GGCGCCCTGC TGA GAGGGGCGCC           TTTTGTTAATTTCTA 100 38
HC661_RS03695  711698 ..  711725 +  -9.9  -5.61596   TTATTTCTTCTGAAA        CAGCCTGAACA AACAAA TGTGCAGGCTG         TTTTTTTATAACCCT 100 49
HC661_RS03705  713694 ..  713704 +  -4.6  -4.56775   TTGTGAAACTCCACC                 GGCG AAC TGCC                 TTTTTCAAACGAGAT  71 135
HC661_RS03715  718054 ..  718073 + -12.2   -4.8622   CCGATTTGATGAAAA            GGACTGGA TGAC TCCAGTCC             TTTTTCCTTCAAGAA 100 41
HC661_RS03720 NONE
HC661_RS03725 NONE
HC661_RS03730 NONE
HC661_RS03735  721237 ..  721256 + -12.2  -5.47218   AATTTGACAGGTAAA            GGACTGGA TGAC TCCAGTCC             TTTTTTTACATCAGC 100 388
HC661_RS03740  723570 ..  723622 + -18.1  -3.03771   GCTGAATCAGGATAA TAAATAATAAAAAGAGCCTTACGGA ATT TCCGTGAGGCTCTTTTTTTTGTGTA TCTTCACCAATCTGA 100 19
HC661_RS03745 NONE
HC661_RS03750 NONE
HC661_RS03755 NONE
HC661_RS03760 NONE
HC661_RS03765  728612 ..  728632 + -12.6   -4.5448   GGTTGAAACATAAAA            TCCCTGCC TTTTC GGCAGGGA            TTGTTTTTATGAATG 100 28
HC661_RS03780 NONE
HC661_RS03785  733951 ..  733966 +  -6.8  -5.80951   GAGTCATAAAAAAAG              GGAGCT TACG GGCTCC               TTTTTTGTTTTCCCT 100 32
HC661_RS03790  734982 ..  735008 + -12.3  -5.94597   AGCGTAATCAATAAG         GAGCTGCCCTT CATAC GGGGGCAGCTC         TTTTTTTTGATGTTA 100 34
HC661_RS03800  738134 ..  738189 +   -15  -3.02829   GAAGAACTTGAGAAT TAAGAAAAGCCGGTACGGCCC-CCG AGAAAGA TGGCGGGTCATACCGGCTTTTTTTA TCTTACACAGATGTC 100 23
HC661_RS03805  738763 ..  738778 +  -7.6   -4.7261   TGATTTTGCTGTAAA              CGCTAT GGAT ATAGCG               TTTCTTTTAATGGAT  83 38
HC661_RS03810  740008 ..  740033 + -15.5  -5.19879   CATTAAGAAAAAAAA         GGAACTTCCGC ACAG GCGGGAGTTCC          TTTTTGTGTTTACAG 100 35
HC661_RS03820  742906 ..  742926 + -10.4  -5.88565   CTGAGAAATAAGAAA            CGGAGGGC GGGAA GCCCTTCG            TTTTTTTGTTGTAAA 100 30
HC661_RS03825  743439 ..  743457 +  -7.4  -5.19212   GAAAAAAAAAGAAAA             GGAGGG GACAAAG CCCTCC             TTTTTTCATCATCAT  90 44
HC661_RS03840  745521 ..  745547 + -11.6  -5.49809   CGTAAGCTGAACAGA         TCCCAAGGGGTT TTC GGTCCCTTGGGA         TTTTTTTGCGGTTTC 100 36
HC661_RS03845  746951 ..  746974 + -12.6  -5.26875   ATAATAAACAAGAAG          CACAAAGGAA AATA TTCCTTTGTG           TTTTTTAATTAACAA 100 37
HC661_RS03850  748511 ..  748528 + -11.3  -6.04953   GGTAGAAGAAAAAAA             GGCAGAC TCAG GTCTGCC              TTTTTTTATTTCTGT 100 36
HC661_RS03855  749307 ..  749326 +  -3.6  -5.67283   CAAGGATCGGATTAA            GGTGAT GAAAAGAA ATCACC             TTTTTTATTTAGGTT  83 26
HC661_RS03860  751743 ..  751760 +  -9.9  -5.48787   TCCTGATAGATTGCA             GACTGAC TTCG GTCAGTC              TTTTTTATGTGTTAT 100 35
HC661_RS03865 NONE
HC661_RS03870 NONE
HC661_RS03875  755174 ..  755197 + -16.8  -4.62475   AGCAGCGAAAAATAA          GCCTTCCGCA TATT TGCGGAAGGC           TTTTGATTTATAAAT 100 26
HC661_RS03880 NONE
HC661_RS03885  757513 ..  757533 +  -9.7  -5.64421   TTCCGTTTTGTGAAA            CACCTGCGA AAA TCACAGGTG            TTTTTTCTTTGCAGT 100 28
HC661_RS03890  758873 ..  758884 +  -5.8  -5.00616   AGGATTTCCACCCGG                CCGT CATC ACGG                 TTTTTTACCCAGCCG  81 173
HC661_RS03900  759726 ..  759749 + -13.9  -2.98778   ATGTATAGAAAAAAA          GCCGTGCTG CACTGA CAGCACGGC           TGATTTACGTTATGC  93 33
HC661_RS03925  762980 ..  763003 + -15.4  -5.42862   AGCAGACTTGAAAAA          TCCGGATCAC CTTT GTGATCCGGA           TTTTTTTGAACATAT 100 30
HC661_RS03930  763555 ..  763578 +   -14  -4.63179   GCTGAACATAAAAAA          GCCAGATCAT TGAT ATGATCTGGC           TTTTGCTTATTCTTT 100 36
HC661_RS03940  766439 ..  766467 +  -3.1  -5.60993   CAAATGTATGCTGTT        CATCCTGATAAAT ATC ATAAGTCAGGGTG        TTTTTTTGTAAGGAG  85 319
        treP  768815 ..  768839 +  -5.7  -4.37198   AAATAGAAAACCTGC         GGGGC-GCCT TCTATC AGGCTGTCCC          TTTTCCCTTTCAATT  70 35
        treC NONE
        treR  771308 ..  771327 +  -9.2  -5.96219   AGAGAAAAATAAAAA            CGGACTGC CGCG GCAGCCCG             TTTTTTTTGTCAGTA 100 29
HC661_RS03975  772114 ..  772136 + -16.3  -4.27796   TATAAGATAAAAAAG           GCTGCCGGG CGTGT CCCGGCAGC           TTTTAACGTTTATTC 100 36
HC661_RS03995  779282 ..  779307 +   -14  -5.61596   TTGCGTAATATAAAA         GCGGAGCGCC GTATCA GGCGTTCCGC          TTTTTTTGTGAAGAT 100 33
HC661_RS04025 NONE
HC661_RS04030 NONE
HC661_RS04035  785922 ..  785945 + -13.9  -5.60993   TACCACTAGAAAGAA          GCCGCCTGA CTTAGA TCAGGCGGC           TTTTTTTATGAGGAC 100 183
         cax NONE
HC661_RS04050  789218 ..  789241 + -11.1  -5.43414   AGATAAATAAAAAAA          GCTGATTCC GGTTCG GGAATCAGC           TTTTTTGTGTGTGAT 100 35
HC661_RS04065  791525 ..  791555 + -14.9  -4.68593   TTTAAAAAGGATTGG      GAATAAACCCCGGC GGAT GCCGGGGTTT-TTC       TTTTTCCATAATGCG 100 20
        pdaA  792427 ..  792451 + -11.5  -5.00196   CGCGCCTGTAGAAAA          CACCTCTCC TGGTAAT GGAGAGGTG          TTTTGTTATTTCAGG  95 30
HC661_RS04090  796091 ..  796109 +  -3.1  -4.03234   TATTTCAAATCAGCC             GTTTTCC CAGGA GGAAGGC             TTTATATAGAAACGG  56 108
        rlmD  797584 ..  797596 +  -2.6   -5.9362   GGTAAATTAAACAAT                TCCG ATTTC CGGG                TTTTTTTATGTTTTG  88 72
HC661_RS04100  799019 ..  799037 +  -2.5   -5.4251   ATAAATAAAAAATAG            GTGTAGAT AATC ATC-ACAC             TTTTTTCTCTCTCAA  78 421
HC661_RS04105  800328 ..  800356 + -11.7  -4.98522   AATACCTCTTCATCC        GGCCCGGATTTCG GTT TGAATTCCGGGTC        TTTTTGTGTGCAGTT 100 45
        acoA NONE
        acoB  803229 ..  803243 +  -4.2  -2.52464   TCACGCTTGAATTGC               TTGGCG AGC CGGCAA               TGAATTAAAGGAGGG  44 3
HC661_RS04125 NONE
        lpdA  805860 ..  805885 + -12.7   -4.8622   TCCGTATAACCGGAA         TACCCTTTCTC AGAT GAGAAGGGGTA          TTTTTCGTTGAAAGC 100 32
HC661_RS04135 NONE
HC661_RS04140  808022 ..  808043 + -12.3  -4.76041   GCATTTTTGAGAATG           GGTCTGCTG ATGA CAGCAGGCC            TTTTTCGTACCTGTG 100 31
HC661_RS04145  809543 ..  809596 +  -6.5  -4.62783   ATTTCCTGATGACAA TCTTCCCCGTTTTCTTTATCTGTTAT TCTAT ATAATAGA-A-AGAAAACGGGG-GGA TTTTTGGGATGAGTC  77 32
HC661_RS04150 NONE
HC661_RS04155  811978 ..  811996 + -10.3  -4.98672   TCAATAAGGTCAAAA             CCTTCCC TTCCC GGGAAGG             TTTTATCTTTTTCGC  93 34
HC661_RS04160 NONE
HC661_RS04165  815649 ..  815672 + -11.8  -5.40072   ATAGATAGGGAAAAA          GACCTCCGACA GAG TG-CGGAGGTC          TTTTTTTCGCGAAGG 100 37
HC661_RS04170 NONE
HC661_RS04175  817092 ..  817113 + -11.6  -5.02287   ACTGTAAGAAACAAA           CCTTGCCG TCTAAT CGGCAAGG            TTTTCTATTTTTCTG  95 34
        cyoE  818572 ..  818587 +  -3.3  -4.11216   CGCGGACGATGTCAT              CAGTT CTTGAT AACTG               TTTTCCAGATCGGAC  58 201
HC661_RS04190 NONE
HC661_RS04195  820906 ..  820923 +  -9.8  -5.14563   ACAGTCTGAAAAAAA             GGCGGC GTTTCA GCCGCC              TTTTTTGATACGGAA  93 32
HC661_RS04205 NONE
HC661_RS04210 NONE
        bstA  824480 ..  824507 +  -9.2  -3.53012   TTTCCCGGAGGATGG        GCTGGCATCTGTC TTA GA-GGATGCCGGC        TTTCGGAAAAACGCC  74 9
        mprF  829368 ..  829386 +  -8.8  -5.79588   GAAAAACCAAAAAAA             GACGCCGT TAA AAGGCGTC             TTTTTTTGGTTTTGA 100 15
HC661_RS04235 NONE
HC661_RS04240  831028 ..  831053 + -15.5  -3.92324   CGAACTGTAAAAAAA         TCCCCGTCTCT ATAC AGAGGCGGGGA          TTTCGTATTAGCGGG 100 31
        recX NONE
HC661_RS04265  833598 ..  833615 + -12.7  -5.45802   AAAAAAATAACAAAA             GAGGCCG GTTC CGGCCTC              TTTTTCTTTTCGGGC 100 31
HC661_RS04270  834937 ..  834964 +   -15   -5.4148   AAAGGATAACAAAAA        GCTTGCAGG-GGA TAT TCCGCCTGCAAGC        TTTTTTCATTGTTTC 100 32
HC661_RS04290  836940 ..  836960 + -14.7  -5.98675   AACATAGCAGTGCAC            CCGCCGGAT ATC GTCCGGCGG            TTTTTTCTTTTTATA 100 39
HC661_RS04295  837595 ..  837612 +  -8.4  -5.61596   AAAATAAAGATTCGG             GCAGGC GAATGA GCCTGC              TTTTTTTCTGAAACT 100 34
HC661_RS04300 NONE
HC661_RS04305  838862 ..  838880 +  -7.4  -5.94743   ACCTTCAGCAATAAA             GTCTGTCC CGC GTACAGAC             TTTTTCTTTTTTTTC 100 27
HC661_RS04310  840121 ..  840148 +    -7   -5.7946   ATCTTGCCGGCAGCC        TGTGTGCTGGCTG CGG CAGCC-GCTCATA        TTTTTTTCTTAAAAG 100 95
        mutY  845037 ..  845049 +  -6.9  -3.30969   CTTCATTCCGTTTCA                GTCCG CCG CGGGC                TTCGATTTCCTGAAT  59 85
        fabL  846020 ..  846034 +  -3.5  -3.59984   CCATCATTATTGACG               GCGGA CGTTC TCTGC               TTGTATAAGTTTTAA  50 3
HC661_RS04340  846296 ..  846320 +    -8  -5.47159   CACTGAAACGAAAAA         GCACTT-CATC TTCG GATGGAAGTGC          TTTTTTCTGTTGCCA  93 42
HC661_RS04345  846712 ..  846731 +   -10  -4.64486   GCAGAAATGAATGTG            CCATTCCG GAAG CGGAGTGG             TTCTTTTATTTTCAT  91 31
HC661_RS04350  847389 ..  847408 +  -8.6  -4.62336   GAATACAATAAAAAA            CCTGTTGG GGTG TCAACAGG             TTTTTCACATGGGCT  87 42
HC661_RS04355  849206 ..  849233 + -17.8  -5.47218   GAACTGATACAAAAA        CGTATGCCGTCC GAAT GGGCGGCATACG         TTTTTTTGAATGCAA 100 34
         bcp NONE
        perR  853034 ..  853073 + -19.6  -4.24338   AAAAAAGAAAACCAC  TAAACGAAGCTGACCG CTTTGATA CGGTCAGCTTCGTTTA   TTTTACACTGTTTTT 100 23
HC661_RS04385  854723 ..  854739 +  -2.3   -3.8709   CGCACAGCGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  51 237
HC661_RS04390  856502 ..  856512 +  -5.4  -4.42235   TAGTAATGCAAGATA                 TCAC GTA GTGA                 TTCTTTTTAACGGTT  70 235
HC661_RS04395  859489 ..  859507 +  -3.2  -3.88001   TATCTAGTTTTGAGA             GAATTTTT TAA AAAAACTC             TTGCTTTTTCTGAAA  54 58
         rrf NONE
HC661_RS04405 NONE
HC661_RS04410  859825 ..  859837 +  -3.3  -3.25942   GTAACCCCGTCTCAA                GGGTT CGA ATCCC                TTGCTCTCCGCCACT  46 0
HC661_RS04415 NONE
HC661_RS04420 NONE
HC661_RS04425 NONE
HC661_RS04430 NONE
HC661_RS04435 NONE
HC661_RS04440 NONE
HC661_RS04445 NONE
HC661_RS04450 NONE
HC661_RS04455 NONE
HC661_RS04460  860729 ..  860743 +  -2.1  -2.89655   GCGTTGGTTCGAATC               CAGCT AGCCC AGTTG               CATTTTTTTAAAAAC  41 11
HC661_RS04465 NONE
HC661_RS04470 NONE
HC661_RS04475  861082 ..  861101 +  -9.4  -5.87996   ATATAATCATATCAA            TGATCTAC TTAT GTAGATCA             TTTTTTTATTGCTTC 100 66
HC661_RS04480  862776 ..  862793 +  -2.8  -3.66732   ATTGAACAATTGTCT             TACAAT ATCTAC ATTGTA              TTGTTCAGCTGCTTC  51 149
HC661_RS04490  864960 ..  864979 +  -2.9  -3.19789   TCAAAATTAGTCGTA            TCAACTT GATAGG AAGTTGG             ATTATTTTATAGGTT  44 118
HC661_RS04495  865123 ..  865143 + -12.7  -6.02914   CACCGGTATACAAAG            GCTTCTACA ATA TGTAGAAGC            TTTTTTTTGTGTGAA 100 33
HC661_RS04505  867817 ..  867838 + -11.6  -5.67967   TTTCTGACTGCAAAA           CCGGGTTC TTCTTT GAACCCGG            TTTTTTTGTGCTGGT 100 226
        thiC  869678 ..  869706 + -11.9  -5.00616   ATCAATAAAAGAAAA        GATGAAGATGG AGTTTGC CCATCTTCATC        TTTTTTAGAAAAACG 100 33
HC661_RS04520 NONE
HC661_RS04525  873235 ..  873270 + -14.1  -3.53012   TTCAATAGAACGGTT    GGGCAAAATACCCGG TGCATC CTGGGGATTTTGCCC     TTTCAGCGGAAAGGA 100 33
HC661_RS04530 NONE
HC661_RS04535 NONE
HC661_RS04540 NONE
HC661_RS04545  877152 ..  877172 +   -14  -5.31545   AATAAACAGAAAAAA            CCTGCCGG GCAGA CCGGCAGG            TTTTTTGATGTTATT 100 66
HC661_RS04555  879830 ..  879863 + -13.2  -4.37527   GCGTGATACAGCCGA     TGCGCTCTCTGGCA GGGTTA TGCCGGAGGGCGTA      TTTTAATCCTTATAA 100 35
HC661_RS04560 NONE
HC661_RS04565 NONE
HC661_RS04570 NONE
        ssuD  883883 ..  883900 + -12.7  -4.59853   AATGCCGGCAGTGAA             GGCGGGT ATTC ACCCGCC              TTTTTAAGCGCTTAG 100 99
        rpsN  884263 ..  884286 +  -8.1  -4.64598   TGGTAACGTAAAAAA          CTCCGGATC TGTCAT GAACCGGAG           TTTTTGCCGTGCTTA  82 35
HC661_RS04595  885222 ..  885258 + -10.3  -5.71712   TACATACGTTATTAA    CGCAGTGTTTCGTTTCT CTG ATAAACGAAGTATTGCG    TTTTTTTATGTGAAA 100 40
        queG  887184 ..  887204 +  -3.3  -6.02919   TGTATAGAGAAAAAG            CACTTGG CGTGAGT TCAAGTG            TTTTTTTCTTTATAA  90 45
HC661_RS04610 NONE
        trmL  888680 ..  888695 + -11.8   -5.8187   TGACGTGAGAAAAAA              CGCCCG CATC CGGGCG               TTTTTTTATTGAATA 100 33
HC661_RS04620 NONE
HC661_RS04625 NONE
HC661_RS04630  890893 ..  890916 + -15.4   -4.2573   ATGTTGTACAGGAAA          GGGTGCTCTT CATA AAGAGCACCC           TTTTGCCGTTATTTG 100 50
        prkA  893143 ..  893162 +  -7.1  -4.45187   GATTTCATTGAGAGG            CCCGTCT GTAAAA GGACGGG             TTCTTTTGTCTGTTT  78 46
        yhbH  894499 ..  894538 + -19.4  -5.15969   CGTATGAAATATAAA  GCCGAGTGAAGAATCGTG CGGC CGCGGTTCTTCACCCGGC   TTTTTTAAATTAAAA 100 27
HC661_RS04645 NONE
HC661_RS04650  896338 ..  896348 +  -6.8  -3.36694   ATGTTTGCTCCGGCG                 GTCG GAC CGAC                 TCTTTCCGGCTGGAT  62 519
HC661_RS04660 NONE
HC661_RS04665  898429 ..  898456 +  -8.5  -6.36459   AGAAGTAATTGAAAA        GGCAAATCTGC GTAAGA GCGGATTTGTC         TTTTTTTTTATTGAA 100 33
HC661_RS04670 NONE
HC661_RS04675 NONE
HC661_RS04680 NONE
HC661_RS04685 NONE
HC661_RS04690  902263 ..  902286 +   -14  -4.68645   ACCTGATATAAAAAA          GCTGTTTTGC CTTT GCAAAACAGC           TTTTCGTTTTAGATG 100 35
HC661_RS04700  903752 ..  903779 +  -5.6  -5.82316   CTCACTGAAAAGAAA        GAATGATTTCCT CTTC GGGCGATCATTC         TTTTTTTTCAGTGCT 100 52
HC661_RS04710  906427 ..  906452 +  -9.9  -6.02919   CACTAAAACGAAAAA         TCCTTCA-TCGT TGA ACGAATGAAGGA         TTTTTTTGTTTCTAA 100 56
HC661_RS04720  907646 ..  907662 +  -9.4   -5.8901   TAAATGAATGGAAAA              GCCGCA TTTGC TGCGGC              TTTTTTATTTTATCT 100 38
HC661_RS04725  908992 ..  909004 +  -3.3   -4.4009   ATTGATTCGGTTTTT                TCGGC TGT GTCGG                TTTTATGCCGTACAC  63 361
HC661_RS04735  912039 ..  912049 +  -5.4  -2.79831   AAAATTGTCAGCCGG                 GATG ATA CATC                 TGTCATCACCCTTCA  52 495
HC661_RS04750  913582 ..  913599 +    -7  -5.32565   TCTGAAGGGTATAAA             GAGCCT TTTGAC AGGCTC              TTTTTTGCTTCCTTG  89 36
HC661_RS04755  914135 ..  914156 + -10.9  -3.96216   AGTAACGGATGAAGA           GAGCTTGCA CTCA TGCAGGCTC            TTCTTTCCGTGAGAA  86 36
HC661_RS04760 NONE
HC661_RS04765  916480 ..  916501 + -10.8  -5.60993   TGAAATAAAAAAACG           CCCGCTCC GCTTAA GGGGCGGG            TTTTTTTATAAAAAC 100 33
HC661_RS04770 NONE
HC661_RS04775  918723 ..  918774 +  -3.3  -5.62045   ATGGAGACCCGGAGA CCCACAAC-AGCT-CTTTACG GAAGCAATAAAG CGTAAAGCGGTTTGTTGTGGG TTTTTTATTCTCTAT  83 88
HC661_RS04780 NONE
        glpK  921223 ..  921270 + -16.6   -4.9792   GTCCTGAGATGAGGA GAGACCACAGCA-CCAAAGTG ATAACTG CGCTTTGGCTGTTGTGGTCTC TTTTTCTATACCGTG 100 81
HC661_RS04790  922978 ..  923009 +  -9.5  -4.98672   CGAACAATAATAACC      GGAGGGCT-GTGCC GAAAA GGCATGAGCCCTTC      TTTTATCTTTTTACA  93 31
HC661_RS04795  924863 ..  924885 + -19.2  -5.61596   GAAATAAACAACAAA           CCGCCGGAAG CGA CTTCCGGCGG           TTTTTTTATACGCCT 100 34
HC661_RS04800  926121 ..  926131 +  -3.2   -2.5001   GCTTCCGTTTCAGGA                 CAGG AGG TCTG                 ATTGATGAAAATTGT  42 10
HC661_RS04805 NONE
HC661_RS04810  927289 ..  927315 + -15.2  -4.53303   GTTCACAAACATAAG         AAATCCCGGCGT CTG ACGCCGGGATTG         TTTTATGTCAGCATG 100 10
HC661_RS04840  933420 ..  933443 + -18.2  -6.09196   CTGTAAAAGAAGAAA          GGATGCGGGG AAAC CCCCGCATCC           TTTTTTTATTTTCCG 100 35
HC661_RS04850  936124 ..  936141 + -11.3  -5.63517   TAGCAGAGATAGAAA             CCCGTTC ATCA GAACGGG              TTTTTTATTTAGACG 100 38
HC661_RS04860  938297 ..  938309 +  -6.9  -3.12923   TGTCCGTTTAACTCT                CCGCG CTG CGTGG                TATCGTTTTAGTAAT  60 54
HC661_RS04865  939231 ..  939255 + -12.9  -5.27938   AATACGCAAGTCTTA          TCCCGCGCTTT TAA AGAGTGCGGGA          TTTTTATTTGAACGT 100 39
HC661_RS04870  940955 ..  940974 +   -15  -5.61881   AACGGGGATTTGTAA            GGAGCGGC ATCC GCCGCTCC             TTTTTATTTTTCGGA 100 26
HC661_RS04875  942430 ..  942451 +  -8.7  -4.81249   TTCATTTTAAAAAAA           CAGGCCC CCGTAAAA GGGCCTG            TTTTTACGTTTAAAA  88 31
HC661_RS04895  945147 ..  945174 +   -15  -5.59534   TGTAAATGAAAAAAA        GCTTGC-CGTCTG TAT CAGACGCGCAAGC        TTTTTTGTTATGCTT 100 36
HC661_RS04910 NONE
HC661_RS04915  949648 ..  949668 + -11.2  -5.39721   CGAAGCAGATAACGG            CAGCCTTC TTTTT GAAGGCTG            TTTTTTATATGATAA 100 29
HC661_RS04920  951246 ..  951270 +  -7.2  -5.47821   TGCTTCATAACGCAA          CCTTGAGC GAAAAATAA GCTCAAGG          TTTTTTTAAATGGAT  93 9
HC661_RS04940  953067 ..  953091 +  -7.8  -4.60041   ACGAATGTGTGAAAA          CCCCGGCT GTGCTCTGA GGCCGGGG          TTTTTCAGGCTGCCT  82 74
HC661_RS04945  954285 ..  954308 +    -6  -5.20216   CATTCCGGAGAAAAA          GAACGG-GCAT AAC AGGCGCCGTTC          TTTTTTCATGATATG  87 14
HC661_RS04950  955097 ..  955119 + -10.6  -4.92757   CGCGACATAAAAAAA           GCCGGATC ATATACA GATCCGGC           TTTTCTTATTCATGG  93 31
         dat  957085 ..  957117 +   -15  -3.06796   GTTCAGTCATAAGCT      GAAAAAAGGCCGGA ACACA TCCGGCCTTTTTAC      TTCAGTCAGATAAAA 100 29
HC661_RS04970  958373 ..  958392 +  -7.9  -3.53343   GGAGCTGTAAAAAAA            GCAGCTT TTGATT AAGCTGC             TTTACAGAAAGAATT  68 31
HC661_RS04980 NONE
HC661_RS04985  963110 ..  963133 +  -7.4  -5.28481   GCGGTGTAATCGGAA          AGGGTGAATC TAAA GATTCGCCCA           TTTTTTCATTCAGTA  90 32
HC661_RS05015 NONE
HC661_RS05020  969004 ..  969028 + -12.9   -5.7946   GGAATAAGCTCCACA          CCCCTCCATCT ATG AAATGGAGGGG          TTTTTTTATTCAACA 100 34
HC661_RS05030  971430 ..  971458 + -12.5  -4.59853   CGGCCGTAATCAAGA       GCCGCAGACGCG AAACGC CG-GTCTGCGGC        TTTTTCGCGGATTGA 100 32
HC661_RS05035  973048 ..  973068 +  -9.7  -5.88197   TTATAATATCAAAAA            CGGCACG GAATCAG CGTGCCG            TTTTTTTATGTTTAA 100 35
HC661_RS05040  974426 ..  974448 + -10.6  -5.75599   TCCCGCTCAAAAAAA           CTGACCCCTT ATG AAGAGGTCAG           TTTTTTTATGATTTC 100 22
HC661_RS05060  977513 ..  977563 + -12.8  -2.71924   AACCGGTAAAATACA GAAGCCGGAAAGCTTCTGTTAT CTGTGGA ATAAAATCAGCTTTCCGGCTTC ATTTACCAAGCGATG  83 32
HC661_RS05070 NONE
HC661_RS05075  979977 ..  979997 +   -14  -6.09196   AAAAAATAAGTGAAA            CAGCCCGG GACAG CCGGGCTG            TTTTTTTATTTTACA 100 32
HC661_RS05080 NONE
HC661_RS05085  984207 ..  984219 +  -2.7  -2.83249   ATTTTCAAAAAAGAG                GTATG TGC TATAC                TGGTATTATGTAAGA  42 49
        yhaM  985211 ..  985232 +  -6.6  -5.15969   CAATAAGATAAAAAA           GACCGATT CTCTAT GATCGGTC            TTTTTTACGTTCAGC  85 35
HC661_RS05095  985550 ..  985577 + -12.1  -5.96894   CATCGCATAAAAAAA        CTGTGC-GGCTC GCCGA GAGCCCGCACAG        TTTTTTTATTTAGAT 100 31
       yhzE1  986686 ..  986712 +   -16  -4.63218   ATTTGTTAAGCGAAA         CGGATCGCTTTT TCT AAAAGCGGTCCG         TTTTCTTACCCGGGC 100 32
       yhzE2  986899 ..  986933 + -19.4  -5.54264   TTATTAAGAAAAAAA     TATGGCTGTCGGGGGT CAG ACCTCCGTCAGCCATA     TTTTTTTGCCTGTTT 100 34
HC661_RS05125  988516 ..  988526 +  -6.8  -3.53343   AATAAGTGGTAGATC                 GGCT GTG AGCC                 TTTAAACACAGCGTT  61 233
HC661_RS05140  989786 ..  989805 + -12.2  -3.71645   AAACACATTAAAAAA            CCTCTTCC GGCC GGAAGAGG             TTTCGGTATGCGGTT  89 50
        ecsA NONE
HC661_RS05165 NONE
HC661_RS05190 NONE
        hemE NONE
        hemH NONE
        hemY 1004497 .. 1004519 + -10.6  -5.52909   TTTGAAACGTACCAG           CCTCCGTTAT CGT AAAACGGAGG           TTTTTTTGCATGTTC 100 11
HC661_RS05210 1005213 .. 1005247 +  -9.5  -4.66609   TGGAAATGTATGTTG     GTCAAGGATTATCTA AATAA TAGATGATCCTTCAC     TTTTTAGGTGCCGTG  93 6
HC661_RS05215 1007647 .. 1007674 + -15.6  -5.58209   ACAGCATAAGAAAAA        GAGGCTCTGAGC AGAT GCTCGGGGCCTC         TTTTTTTAGATTTCG 100 32
HC661_RS05230 1010186 .. 1010223 + -17.9  -3.08224   ATCGCCGATGGCATA   AAAAACCCTGCGCGGAA ATCA TTCCGTGCAGGGTTTTC    ATTTTAACCTGAGAT 100 25
HC661_RS05245 1012778 .. 1012788 +  -2.4  -2.77135   AGTGGGAGAAATAAA                 GGAG GAG CACC                 ATGTTATTTATCGAC  41 27
HC661_RS05250 NONE
HC661_RS05255 1014525 .. 1014550 +  -7.6  -5.20633   TTTCCGGTTTTACGG         CACTCG-GGGC TTTTT GCCCTTGAGTG         TTTTTCTATATTTTT  90 41
HC661_RS05260 1016194 .. 1016212 + -14.6  -4.21908   AATGACGGACGAAAA             GCGAAGCC GGG GGCTTCGC             TTTTACATGCTGATC 100 36
HC661_RS05270 1018040 .. 1018064 +  -9.2   -5.9362   AAAATAATAAAAAAA         CCGGCG-GGGC CATG GCCGACGCCGG          TTTTTTTATGTTTTA 100 34
HC661_RS05285 1020581 .. 1020602 +  -5.8  -5.24416   AATGCTCGCCAAAAA           GGCCCAAA ACTGAA TTCGGGCC            TTTTTGTTATGATTC  85 13
HC661_RS05320 1028381 .. 1028400 + -12.2  -3.73904   GATAATGTAAAAAAA            GCCAATCC ATAT GGATTGGC             TTATTCACTCTGTTT  89 36
HC661_RS05330 1029554 .. 1029574 + -11.1  -5.22039   GATGTGAAGGGACGG            GTCCTCTCC TTT GGGGAGGGC            TTTTTTCGATTTACA 100 51
HC661_RS05335 NONE
HC661_RS05340 1030460 .. 1030477 +  -5.5   -5.7946   GAAATGTTAAAAAAA             CAACCCT GAGG AGGGCTG              TTTTTTTATTGGAAA 100 46
HC661_RS05345 1031137 .. 1031163 + -13.1  -3.01243   GAGTTGGAGAATAAC         GGGGAACCTCA ACAAA TGAGGTTCCTC         TAATTGTTATATAGA  91 91
HC661_RS05355 1032463 .. 1032484 + -13.1  -5.47821   TGAGAAATAAAAAAA           CAAGCCTCT TTAA AGAGGCTTG            TTTTTTTAAATGGAT 100 31
HC661_RS05380 NONE
        lepB 1036273 .. 1036292 +  -6.4  -5.75945   GTCATCAGTGAATCA            GACGCC AGGTAAAC GGCGTC             TTTTTTTTCGGAAAT 100 14
HC661_RS05390 NONE
HC661_RS05395 1038526 .. 1038543 +  -9.9  -5.80364   TGTTCAAATAAAAAA             CACGCAT ATGG ATGCGTG              TTTTTTTATTCGGAT 100 30
        addB NONE
        addA 1050624 .. 1050636 +  -4.8  -4.18494   AAAAAGTGAGGTGAA                TGCG GTATG CGCA                TTTTACATACAGCTG  65 84
HC661_RS05435 NONE
HC661_RS05440 NONE
HC661_RS05445 1055514 .. 1055540 + -11.7  -4.64657   AACGCTGAACCAAAA        GCAGCC-CTCTT CTGA AAGAGCGGCTGC         TTTTTAGGCGTTTCC  95 39
HC661_RS05485 1059053 .. 1059063 +  -3.2  -3.41602   CGATTGATAATGCTC                 CGAG CGG CTTG                 TTGTGGTACCATAAG  48 57
HC661_RS05490 1059488 .. 1059503 + -10.4  -5.86061   CAATCGCTTGAAAAA              CCCGGA TGCA TCCGGG               TTTTTTTTAGTCGCG 100 42
        asnB 1062294 .. 1062321 +  -7.7  -5.18726   GAATAACAGTGCCGC        GACCGGTTTCC GCTGAA GGATATCGGTC         TTTTTATTGTGAAAC  91 35
HC661_RS05510 1063115 .. 1063143 +  -7.5   -3.9009   CGCAAGCATAAAAAA       CGCCCG--GCTTC ATAAC GAAGCTTCGGGCG       TTTATGCAATCCCTT  71 30
HC661_RS05520 1065615 .. 1065637 + -13.5  -5.38249   ATTCGAAGTAAAAAA           GCAAAGGCC CGGGA GGCCTTTGC           TTTTTTATGATTCGT 100 142
HC661_RS05550 1071293 .. 1071314 +  -5.9  -5.86976   AATTTTCTGCAAAAA           CATCGGT GAACCAAA ACCGATG            TTTTTTATTTTCTCA 100 40
HC661_RS05555 NONE
HC661_RS05560 1074056 .. 1074077 +  -3.7  -3.28712   TAAACGATCAGGTCC           GCCGGTTTAC TTT GTA-ACGGGC           TTATGCCCCGCCCCC  50 9
HC661_RS05565 1075542 .. 1075571 +    -7  -4.59919   GAATTCTGGTTTTTT       CCCGCCTGCCGG TTTTTT TCGGCAAGCCGG        TTCTTTTTCTGATTT  80 111
HC661_RS05580 NONE
HC661_RS05585 1077978 .. 1078002 + -13.6  -5.80364   GTGAAATAAAAAAGC         GGCGCCCTCGT CTAA ACG-GGGCGCC          TTTTTTTATTGCAAT 100 32
HC661_RS05605 NONE
HC661_RS05610 1080521 .. 1080560 +  -9.5  -5.23292   CAGTAATAAGAAAAT  GCACCT-CGGATTTTAGG TACAT CCTAAAGTTTGGAGGTGC  TTTTCTTTTGTCTGC 100 35
HC661_RS05620 NONE
HC661_RS05625 1083376 .. 1083396 +  -9.7  -5.18726   TGATGCTGAAAAAAA            CAGGCTGAT CGG AGCAGCCTG            TTTTTCTTATGCCCC 100 18
HC661_RS05630 NONE
        argJ NONE
        argB NONE
HC661_RS05645 1087792 .. 1087809 +  -4.3  -2.73203   TTCGATATAAAAGTA             TAAAAAT TCAT ATTTTTA              ATTAATTATTCATCA  47 47
HC661_RS05650 NONE
HC661_RS05655 NONE
        argF 1092939 .. 1092959 + -14.1  -4.96106   GGATGAACAAAAAAA            CCGCTGAAT CTC ATTCAGCGG            TTTTTAATATTTCTC 100 19
HC661_RS05665 1093212 .. 1093227 +    -9  -5.99154   GTGAACACAAAAAAA              CCTGCT GAAT AGCAGG               TTTTTTTATTTAATG 100 37
HC661_RS05675 1094432 .. 1094455 +  -6.7  -3.84394   ATGAATAGAATACAA          CAGCCATCT CTTTTC AGAGGGCTG           TTTGGCTTGTGTGTG  69 40
HC661_RS05680 1095154 .. 1095168 +  -3.5  -3.48981   AAGGGGTTGAACATG               GCTTG ATCAC CAGGC               TTGTCATGATCTTTT  50 113
HC661_RS05690 1096318 .. 1096337 +  -8.6  -4.18697   GAATAAATAAAGAGA            GCCACTTT TCAT GAAGTGGC             TTTTCACATGATTTT  82 31
HC661_RS05700 NONE
        fabF 1098938 .. 1098962 + -11.4  -5.96219   TAATACAGTTTCTGA          CCGGCTGCCT GAAAA AGGTGGCCGG          TTTTTTTTGTGCGTG 100 38
HC661_RS05710 1099919 .. 1099936 +  -4.1  -2.90075   CTATATTTTGTGATA             GCGAAAC GTAT GTTTCCC              TCTGCTTCAGCGGAA  46 149
HC661_RS05715 NONE
HC661_RS05720 NONE
HC661_RS05725 1103659 .. 1103685 +   -16  -3.56837   ATAGCAAAAGCCCTG         GAGAGGGAAGGA GGT TCCTTTCCTCTC         TTATCCTATTTAAAA 100 37
HC661_RS05730 NONE
HC661_RS05735 1105601 .. 1105621 +  -8.3  -5.80364   AAAAATGTGAAATGA            TCTCCCG GACGGAA CGGGAGA            TTTTTTTGTTGCAAT 100 26
HC661_RS05740 1106500 .. 1106531 + -13.8  -4.45253   ATCAAAAGTGAACTA      AAAAAGAGGCGGGG ATTC TCCCGCCTCTTTTC       TTTATCTTCTTTTCC 100 25
HC661_RS05750 1109932 .. 1109960 + -16.2  -4.29227   AAACAAAAGACCCAA        GGTATATGGGGA GGATG TCCCCATATACC        TTTCTTACTGATTAA 100 54
HC661_RS05755 NONE
        oppC NONE
HC661_RS05765 NONE
        oppF 1113874 .. 1113898 + -17.3  -5.75945   CCTATAAACGTATCA          TCCTCCAAGAC TCA GTCTTGGAGGA          TTTTTTTTCGCACAT 100 34
HC661_RS05775 NONE
HC661_RS05780 1115965 .. 1115975 +    -4  -4.05026   TACCTATAAAGATTC                 CTTT TTT AAAG                 TTATTTCAATTTGAG  59 135
         spx 1116456 .. 1116479 +  -7.5  -5.51353   ATAAGCATGGAAAAA          GCCCAAAACC ATCGC GGTTT-GGGC          TTTTTGTTATTTTTC  93 53
        mecA 1118079 .. 1118102 +  -9.7  -6.17268   TTGCATCATAACAAA          CCGATTTCT CTCAGC AGAAATCGG           TTTTTTTTGTTCTGA 100 30
HC661_RS05800 1119492 .. 1119508 +  -4.5  -3.53012   TTGGTATGCTCGGTC              TTATATG CCG CATATGA              TTTGACAAAAGGCAG  54 105
        pepF 1121454 .. 1121476 + -14.2  -4.85599   TCGTAATTCAAAAAA           GCCTGTGCAT TAG ATGCGCAGGC           TTTTTCTAAAATCCC 100 35
HC661_RS05835 NONE
        yjbM 1125893 .. 1125907 +  -2.8  -3.08812   GGAAAGGAGGGGAAT               GGCA TGAAATT TGCC               GTTTCTTCAAAAGGA  43 40
HC661_RS05845 NONE
HC661_RS05850 1127606 .. 1127631 + -11.2  -5.53991   TTGAACACATGTAAA         GCCCG-AACCG TTTGC CGGTTTCGGGC         TTTTTTTCATGCCTG 100 27
HC661_RS05860 1130654 .. 1130678 + -12.9  -6.14618   CATTTAAATTCCAAA          CCACTTTTCCG ATG CGGGAAGGTGG          TTTTTTTATTTTATC 100 220
        tenA NONE
        tenI NONE
        thiO NONE
        thiS NONE
        thiG NONE
HC661_RS05890 NONE
        thiD 1135920 .. 1135941 +  -4.4    -4.652   ACGAGATAAAAAAGA           GACCGC TTCAACATCC GCGGTC            TTTTTCCCATGCTTT  69 32
        fabI 1136828 .. 1136848 + -11.9  -5.82036   CACGTTAAATAACAA            GCAGTCCCT TTC AGGGATTGC            TTTTTTCTTTCTTCT 100 33
HC661_RS05905 1137535 .. 1137567 +  -3.4   -5.1286   ATTTTAACCATACAA      AAAGCTGCCTGA ATTCTTTCA TCCGGCAGCTTA      TTTTTATGCTTTTTG  72 34
HC661_RS05935 1140871 .. 1140899 + -13.3  -5.00616   CGAAATAGCCGTTTT        CTAAAAAACCGGA GCT TCCGGTTTTTTTG        TTTTTTGCCGAACGC 100 228
HC661_RS05940 NONE
HC661_RS05945 1141428 .. 1141451 + -11.7  -3.12606   CAAGACCTTGGATAA          GCGCGGGAC CGTTCA GTCCCGTGC           TTCCCTGATGTATGA  83 48
HC661_RS05950 1141868 .. 1141893 + -19.1   -4.0942   CTTTTTATGTGAGAA         GAACCCGGCAG TGAT CTGCCGGGTTC          TTTATATCCTGAGTG 100 67
HC661_RS05960 1144561 .. 1144576 +  -7.5  -5.48825   ATACGTGTGAAAAAG              CCCGG ATATAA CCGGG               TTTTTTTGAGTCGTA  93 31
HC661_RS06000 NONE
        metC 1151627 .. 1151653 +  -7.3  -6.09196   GATCATAAACGAAAA        GGGCGCCGTC AATTTTGC GACG-CGCCC         TTTTTTTATTTTAGA 100 33
HC661_RS06010 1151838 .. 1151870 + -11.4   -5.5074   CGGAATCATCCACGG      CGGTTAGAGGCGTT ATATC AACGTTTCTAGCCG      TTTTTTATTGCGTTG 100 31
HC661_RS06015 1153134 .. 1153147 +  -2.4  -4.41348   CTTATCGAAAAAAAG               CGTA CTTGTC TACG                TTTATTTAAGCGCGC  59 116
HC661_RS06020 1153919 .. 1153939 +  -8.3  -2.80499   GCTGCGCGATTTGAT            TCGTTAACG CCT CGTTAACGC            CTTGTTAACGTCTTC  66 8
HC661_RS06025 1155649 .. 1155659 +  -5.4  -3.39429   GTAAGAAACAATGCG                 CGTT CGA AACG                 TCTTTAAACGTTGTT  56 449
HC661_RS06035 1156945 .. 1156963 +  -6.6  -5.10767   CTTTAAAAATGAAGA             AGACGCCT TAC GGGCGTCC             TTTTTGTATTAACTA  85 35
HC661_RS06055 NONE
HC661_RS06060 NONE
HC661_RS06065 NONE
HC661_RS06070 NONE
HC661_RS06075 1159600 .. 1159622 +  -5.5  -5.68039   TGAGGTTCCGCAATA           AAAGCCGGT TAAAC GCCGGCTTA           TTTTTTTGTCCATTT  93 38
HC661_RS06080 1160669 .. 1160680 +  -2.2  -4.41348   CAAGATTGAGCGAAA                GCGA ACGA TTGC                 TTTGTTTCAAAAAGA  59 234
HC661_RS06085 1161505 .. 1161525 + -12.7  -5.68039   TCTCCTTCAATCTTG            CATTAGCCA TTC TGGCTAATG            TTTTTTTCTGCCTTT 100 7
HC661_RS06090 1162267 .. 1162277 +  -8.2  -2.50779   TTTCACATGCAAAAA                 CCGG CAC CCGG                 CTATATTACTATTAG  61 476
HC661_RS06095 NONE
HC661_RS06100 NONE
HC661_RS06105 1164047 .. 1164057 +    -4  -2.64274   AAATAAAGGAGGAAT                 TTCA TAA TGAA                 TAAATTTGAAAAGAT  45 56
HC661_RS06110 1164785 .. 1164805 +  -8.9  -5.80951   TCACGAATCAAGCAA            GGGTGTCCG AAA TGGGCGCCC            TTTTTTATTTTACCT 100 50
HC661_RS06115 NONE
HC661_RS06120 1168179 .. 1168194 + -11.8  -4.62054   GAGTTGACGAAGCAG              GGCGGC TAAT GCCGCC               TTTTAGTTTCATTCG  95 324
HC661_RS06135 1168959 .. 1168986 + -10.7  -5.33026   TGGAGTCACAAAAAA        GAGGAGTCACA ATTTAA TGTGATTCCTC         TTTTTGTTTGCCTTG 100 309
HC661_RS06150 1172886 .. 1172914 +  -9.7  -5.37593   ACCACACAATAAAAA       GA-CCCCTCACA AATAAC TGTGAGGGGGTC        TTTTTTGATTTACAA 100 106
HC661_RS06170 NONE
HC661_RS06175 1175848 .. 1175875 +    -4  -4.16016   TTGATGTGATTGAAT        GCATGGTATCTG AAGT CAGTGACCTTGC         TTTCTTAAAGAGTGA  61 371
HC661_RS06215 1182735 .. 1182751 +  -6.6  -3.56042   CCCGAAGATCCAAGA              CCATAC AGGTG GTATGG              TGTGTTTTTAAATAC  64 356
HC661_RS06225 1183583 .. 1183601 +  -4.6  -3.41292   AAAACAAAAAGATAT             TGATCATT TAA AATGGTCG             TGTTGTATTAAAAAT  52 99
HC661_RS06230 1184685 .. 1184700 +  -2.6  -5.06414   GTAAATAGATACGGA              TTTAGA CGGA TCTGAA               TTTTTCTTAGAGGAG  70 168
HC661_RS06235 NONE
HC661_RS06240 1186028 .. 1186060 +    -5   -5.4659   CGGCCGTATACTCAA     TA-ACCCCCTTAC CATTAACT GTGAGGGGGTCTA      TTTTTATTTATCTTA  87 235
HC661_RS06245 1186973 .. 1186990 +  -9.8  -2.71144   TTTACTTACAGGAGC             GGCGGC CGTTGC GCCGCC              TGCTTCCGCCGCATG  70 79
         bla 1188186 .. 1188205 +  -8.6  -5.47431   CTTAAATAAACATTG            CCGTTCAT TTTT ATGGACGG             TTTTTTATATGTTGA  95 32
HC661_RS06255 1188642 .. 1188658 + -12.3  -5.37593   TTTCATTCATTAAAA              CCCTTGC TGC GCAAGGG              TTTTTTACTTTAAAA 100 87
HC661_RS06305 NONE
HC661_RS06310 1201216 .. 1201230 +  -6.4   -3.3782   TTTGATCGAAAGTAA               GTGATC TTG GATCGC               TTAGTTAAATGAATC  60 199
HC661_RS06315 1202519 .. 1202541 +   -15    -5.626   TGTTTTCCTTCTGCA           GCCCTCTTTT TTA AAAAGAGGGC           TTTTTTTATGAGGTG 100 46
HC661_RS06325 1204123 .. 1204145 +  -7.6  -5.42265   AACGGGCAAAAAAAA           GACGCCGGTT ATC ATCCGGCATC           TTTTTTATACTTTCA  93 339
        fdhF NONE
HC661_RS06355 1209062 .. 1209085 + -13.9    -5.252   TGAGTGAACATATCT          CCCGAGCCT GGCCGA AGGCTCGGG           TTTTTTGTGCGCCTC 100 34
HC661_RS06360 NONE
HC661_RS06365 1211671 .. 1211699 +  -5.2  -4.91357   AAATTGATTGAGAAA       CAGGCAGCGCACC GGAA GACG-GCTGCCTG        TTTTGTTATATGTTT  77 34
HC661_RS06375 1212892 .. 1212927 +  -9.2  -5.63103   TGTCATAAACCATCA    TTCAGCAGGGAA AAAAGCCTACGC TTCCCTGCTGAA     TTTTTTTAATTGCCA 100 33
HC661_RS06395 1216323 .. 1216344 +  -5.9  -3.85504   TTTATTTTTGTAAAT           GATTGTGCA TGAA TTCACAATC            TTGCTTTTTCATGCT  63 301
HC661_RS06400 NONE
HC661_RS06405 1218088 .. 1218115 + -11.4  -5.41143   TAAGATCACACAGAA        GACATTGCCG-GA CTT TCTCGGCAGTGTC        TTTTTTTAACGGATA 100 45
        uxaC 1219617 .. 1219631 +  -4.2  -4.09685   TGTTACCGGAATGCT               GAGGAA TAT TTCCGC               TTTTAAAAAATGGAA  59 5
HC661_RS06415 1221062 .. 1221072 +  -3.2  -3.21747   ACTTTAGTGATTTTA                 TGGA CTG TCCG                 TTAATGGTACAATAG  46 40
HC661_RS06420 1222145 .. 1222159 +  -2.8   -3.0814   TCTGATTATCCGGGT               TTTCAC ACG GAGAAA               TGTTAACGTGTGCAT  43 48
HC661_RS06425 NONE
HC661_RS06430 1225142 .. 1225160 +  -3.8  -5.56264   ATTATAAGGGAAAAG             GCGACC CGTAAAA GGTTGC             TTTTTTGTATTTGAA  85 34
HC661_RS06435 NONE
HC661_RS06440 1227359 .. 1227385 + -15.3  -5.47159   CCAAACAGCAGTGAA         TACGTGAAGCC GTAGA GGCTTCACGTA         TTTTTTATGTTGAGA 100 11
HC661_RS06450 1228017 .. 1228061 + -17.5  -4.08485   GGGTCAAAACACCTT TTAAACAGCCAATTGCCGATA GTT TATCGGTGATTGGTTGTTTAG TTTGGTTTGAATACG 100 128
HC661_RS06470 NONE
HC661_RS06475 1232126 .. 1232145 + -12.2  -4.64763   CAAACATAACATAAA            GACCCTTC TTTG GAAGGGTC             TTATTTTTTGCATGC  95 32
HC661_RS06480 1233225 .. 1233245 + -13.3  -4.46854   CTGTAATCAATAAAA            CGGAAGCTC TCC GGGCTTCCG            TTTCTTCTTACATAC 100 35
HC661_RS06490 NONE
HC661_RS06495 1235346 .. 1235378 + -14.2   -2.6186   TTCATAATACACATT     CGGC-CGCTTGTCGG ATAA CAGACAAGCGAGCCG      CTTCTGAAATTGAAT  88 122
HC661_RS06510 1236781 .. 1236794 +  -3.7  -4.99861   ATGACAAAATAGGAT               CCGCC ATTT GGCTG                TTTTTATGGTTCATC  71 88
HC661_RS06520 NONE
HC661_RS06525 NONE
HC661_RS06530 NONE
HC661_RS06535 1239072 .. 1239115 + -10.5   -5.7946   AGACGGAAAGCCTGC GGACACTGATCAATCGCGTA TATGC TGCGC-ATTGGTTGGTGTCC TTTTTTTGTTCCGAA 100 64
HC661_RS06540 1239706 .. 1239725 +  -3.5  -5.18726   AGACGATCACAAAAA            GCGGC CCGATTAGAA GCCGC             TTTTTATTATAGACA  76 72
HC661_RS06545 NONE
HC661_RS06550 NONE
HC661_RS06555 NONE
HC661_RS06560 NONE
HC661_RS06565 NONE
HC661_RS06570 NONE
HC661_RS06575 NONE
HC661_RS06580 NONE
HC661_RS06585 NONE
HC661_RS06590 NONE
HC661_RS06595 NONE
HC661_RS06600 1248897 .. 1248916 +  -9.3  -5.24129   TCGGTATGAGTGAAA            CAGGCCT TTTTAC AGGCCTG             TTTTTTATAAAAAAA  93 47
HC661_RS06605 1249413 .. 1249457 +  -3.7  -3.35798   GATAAAAGATGGGAA TAAGGAAGC-CGTGTATCTC TATTAC GCGATGCATGAGCTTCATTA TTCTCCATCAGAACT  50 39
HC661_RS06610 NONE
HC661_RS06615 NONE
HC661_RS06620 NONE
HC661_RS06625 NONE
HC661_RS06630 1256577 .. 1256597 +  -2.5  -2.78807   ATCAGCCTATTAAAG            CCGCTTC ATCATCC GAAGAGG            GCTTTTTTACATGAT  42 70
HC661_RS06635 NONE
HC661_RS06640 NONE
HC661_RS06645 1258649 .. 1258659 +  -5.4  -2.62515   TCAACAATAACGAGG                 TGGT CTT ACCA                 TGATATCAGCCGCTT  51 12
HC661_RS06650 NONE
HC661_RS06655 NONE
HC661_RS06660 NONE
HC661_RS06665 NONE
HC661_RS06670 NONE
HC661_RS06675 NONE
HC661_RS06680 NONE
HC661_RS06685 1263461 .. 1263493 + -13.5  -6.04324   AGCTTTAACAAAAAA      GGCTGAGTCCCGT TCACATT GCGGGATTCAGCC      TTTTTTCTTTTTTAA 100 33
HC661_RS06715 1269252 .. 1269278 + -10.2  -5.88061   TCAGAAATCATGACA        GATGCCTCCCG GCTTGA CGGG-GGCATC         TTTTTTTGCTTTTTT 100 42
HC661_RS06720 NONE
HC661_RS06725 1272599 .. 1272626 + -12.7  -5.31059   ATGTCAGAAATAAAG        GCCGCGGGATG ACAGAA TGTCCCGCGGC         TTTTTTCATTCATCT 100 76
HC661_RS06745 1277410 .. 1277438 + -14.8  -5.06451   AACTATTTCTATCAG        CAAACCCTTTTC CCGGT GAAAAGGGTTTG        TTTTTTCCCATAATG 100 39
HC661_RS06750 1278386 .. 1278399 +  -2.3  -3.79687   TGTTAAAGGGGTGAA               CGGCA TTGC TGCGG                TATTTTATCAAACGT  51 35
HC661_RS06755 NONE
HC661_RS06760 NONE
HC661_RS06765 NONE
HC661_RS06770 1282939 .. 1282968 + -11.5  -3.54879   TACAGCGGAAACATA       CGCCGTTCTTTTG CCGT TAAAGGAGCGGCG        TGTTTCACTTTTCAA  88 44
HC661_RS06775 NONE
HC661_RS06780 NONE
HC661_RS06785 NONE
HC661_RS06790 1286910 .. 1286937 +   -10  -5.26875   CATTTATACAAAAAA        GAAAGCTGAC AATATAAA GTCAGCTTTC         TTTTTTAATTAAACC 100 17
HC661_RS06805 1289643 .. 1289661 + -11.8  -5.67063   TTGGTAATCGTCAAA             CCGCTTTT TTA AAAAGCGG             TTTTTTTATGCTGAG 100 34
HC661_RS06810 1290390 .. 1290429 +  -6.5   -5.5208   CACGGAGGGAAAAAA GCCCGGGAGAGTCAATCTC ATGT GAGAC-GACTAT-CCGGGC  TTTTTTGTATTGTCC  91 136
HC661_RS06815 NONE
HC661_RS06820 1291121 .. 1291134 +  -3.9  -3.14487   AAATTCTTTCGTAAA               TTGAT TTTT ATCAA                ATTTTCAGTATAATC  48 27
        purU 1292099 .. 1292121 + -12.7  -5.28176   GTATTTAATTAATGA           CGGTCCGCC GGGGA GGCGGACTG           TTTTTTATGGATGAA 100 29
HC661_RS06830 NONE
        proA 1294830 .. 1294853 +  -8.2  -5.60993   CGTATAATCTTTTAA          GCTTATCCTT CAAA AAGGGTAGGC           TTTTTTTATGCGGAA 100 34
HC661_RS06840 1295364 .. 1295390 + -15.3   -5.0538   GCAGCAGAATAAAAA         TAAGGATGCCC ATTCG GGGCATCCTTA         TTTTTTGCCGTGCAG 100 29
HC661_RS06850 1296397 .. 1296421 +   -13  -4.63218   AAATAACCGAACGAA          TATCCCGGAT TTTAT ATCCGGGATA          TTTTATTAACGAAAA 100 39
HC661_RS06860 NONE
HC661_RS06865 1298702 .. 1298726 +  -6.5  -5.52909   GTCTCAATTAAAAAA         GGATCA-GCG GACAAA CGCCTGATCC          TTTTTTTGCATGTTC  91 4
        yeiL 1302009 .. 1302041 + -12.7  -5.60993   TAGCACGCCCAGAAA      AAACAGCCACCCGCG ATT TGCGGATGGCTGTTC      TTTTTTTATACAAGC 100 38
HC661_RS06895 1306739 .. 1306766 + -13.4  -4.82901   ACATACATAACAAAA        CAGGCTGCCGAA TCAC TCCGGCGGCCTG         TTTTTATACAAACAA 100 40
HC661_RS06915 1311506 .. 1311516 +  -3.2  -2.62184   CAATCTAAAATTGAA                 CAGG AGG TCTG                 TCATATGAAGAAAAG  43 98
HC661_RS06920 1311651 .. 1311679 +   -14  -4.77173   ATGAAAGCGATTTGC        CGGAATAAGGGC TTTAT GCCTTTATTCCG        TTTATTTTATAGGCA 100 18
        mgtE 1313526 .. 1313547 + -12.3  -5.93809   TGCTTTATAAAAAAA           GTCCGTCTC ACAG GAGGCGGAC            TTTTTTTTATCAGCG 100 31
HC661_RS06940 NONE
        fbpA 1314494 .. 1314527 +    -4  -5.71712   CCCTATAAAGAACGG     AACCCTTATACA AATTAAAAGA TGTATAAGGGTA      TTTTTTTATATAAAA  88 8
HC661_RS06950 1315136 .. 1315156 +  -9.8  -6.10295   GAAAGCGGATACAGA            CACTCTTC TTCAC GAAGAGTG            TTTTTTTTCTGTTCC 100 43
HC661_RS06955 1315846 .. 1315868 +  -9.2     -4.31   GTATCAGACTGAAAA           GAGCTGAC AAAAAGC GTCAGCTC           TTTCTCTTGATTTGC  85 19
HC661_RS06970 1319904 .. 1319930 + -12.4  -5.08824   ATTCATGTCTAGCAA         GACCTTTGCC TTATATC GGCAAAGGTC         TTTTTTGCGTAAAAA 100 180
HC661_RS06975 1320790 .. 1320820 +  -7.7  -5.63517   TAAAATGATCAAAAA      GGGAGTCTGGCTTT TTAA AAAGC-AGGTTCCC       TTTTTTGTTTGAAAC 100 38
        sigI NONE
HC661_RS06985 1323205 .. 1323216 +  -2.2  -4.54727   TTTTCTCTGGCAAGA                TGTG TTTT CGCA                 TTTTAGTTTCAAACG  61 255
        htpX 1325065 .. 1325086 +  -7.3  -5.63517   AAATAATCAACAAAA           CCTCTGACA ATCG TTTCAGAGG            TTTTTTGTTTAAAGA 100 35
HC661_RS07005 1326567 .. 1326588 + -13.1  -5.46657   ATAATTATCGGCTGA           CACCGCTTT TCAG AAAGCGGTG            TTTTTTATTGCCGTA 100 26
HC661_RS07010 NONE
HC661_RS07015 1327512 .. 1327541 + -15.9  -4.39407   GCAAACAATAAAAAA       TACCTCTTAGGCG ATAA CGCTTAAGAGGTA        TTTTGCATTATTTCG 100 30
HC661_RS07025 NONE
HC661_RS07030 1331753 .. 1331765 +  -7.7  -2.79312   AAAAAACCGCTGACA                TTGCC TGA GGCAA                TATCATCAGCGGTTT  62 238
HC661_RS07050 1336612 .. 1336636 +  -3.6   -5.9362   GGACATAACACGAAG          CCTCTTTC TGCTCATAC GGAAGAGG          TTTTTTTATGTTTTG  90 179
        mtnW NONE
        mtnX NONE
HC661_RS07065 NONE
HC661_RS07070 1339743 .. 1339769 + -16.7  -5.58179   TGATAGACGCCCGAA         CCTCTCATGCC CCGCC GGCATGAGAGG         TTTTTTATTGTAATA 100 38
HC661_RS07075 1340458 .. 1340474 +  -7.9  -5.52384   TCTTTAAATAAAAAA              CACCCCG ATC CAGGGTG              TTTTTTTCATCGAGA  93 213
HC661_RS07085 1342634 .. 1342686 +   -14   -4.2828   CGCTAAACATTTTCA TCAG-AA-ATAAAAAAGGAAGCCATT CTG AAAGGCTTCCTTTTTTATATTACTGA TTTTGGTCGGTCGCG 100 16
HC661_RS07105 NONE
HC661_RS07110 1349188 .. 1349211 + -10.4  -5.88565   TTAAACCCGATTTTG          CAGCCTGACAC AGG GT-TCAGGCTG          TTTTTTTATTGTCAC 100 37
        queC NONE
        queD NONE
        queE NONE
        queF 1351886 .. 1351904 +  -9.6  -5.49579   ACAGAAGCAGATTAA             GGCGTACA ATT TGTACGTC             TTTTCTTTTTTATCC 100 146
HC661_RS07140 1353869 .. 1353888 + -10.8  -5.45802   GCAGAGGTAATGTAA            GACGTACA AATG TGTACGTC             TTTTTCTTTTAAGCA 100 438
HC661_RS07155 NONE
HC661_RS07160 1356775 .. 1356794 +  -6.4  -4.18018   ATCGACCATATAGTT            TCTCCTCA GAAA TGAGGGGG             TTTTACATAAAAAAG  71 206
HC661_RS07165 1357299 .. 1357314 + -10.4  -4.38154   AATTCATTTGAAAAA              GCTGCC GGGC GGCAGC               TTTTGTGCGGGATAT  90 40
HC661_RS07175 1357902 .. 1357923 +  -8.7  -6.47325   AGCCAAGAAGCTGAC           GGCTCCTCG CACT TGAGGAGTC            TTTTTTTTGTTTTTT 100 27
HC661_RS07180 1358800 .. 1358831 + -12.5   -5.2696   GTATTTGCGATGTAA      GCATAG-CGGGATA AAAAA TATCCCGGCTATGC      TTTTTTCAATTTTGA 100 26
HC661_RS07185 NONE
HC661_RS07190 1360816 .. 1360841 + -19.1  -5.13473   TCAGAGAAATAAAAA         GGTGCTGGAGG AATT CCTCCAGCACC          TTTTTTGCATATAAT 100 29
HC661_RS07195 1362975 .. 1362995 + -12.5   -5.1615   TTAAAATAAACATGA            CAGCCGCAC ATC GGGCGGCTG            TTTTTTAAATGTTCG 100 32
HC661_RS07200 1364185 .. 1364230 +   -15  -3.10597   GAAATAAAAAGCTTT GTGATAAAAAAGGACGGTTC TGGTAC GCAGCGTCCTTTTTTATCAC CTTTTAAATGAAAAA 100 34
HC661_RS07205 NONE
HC661_RS07210 1366405 .. 1366421 +  -5.1  -4.17048   ATTGAGGGTAAAAAA              CGGGA AGAACGG TCCCG              TTATTTTGCACACCC  65 91
HC661_RS07215 1368679 .. 1368706 + -16.4  -2.98986   TAAGCATATAAATAC        GCCGTGCTTGTC AGAT GACAAGTACGGC         TGTATGATATAATAT 100 38
HC661_RS07220 NONE
        ptsP 1370753 .. 1370774 + -12.3  -5.63374   TAAGTAATACAAAAG           CCAGACGGT GTAA GCCGTCTGG            TTTTTTTCATATTCG 100 34
HC661_RS07230 NONE
        splB 1372189 .. 1372209 + -15.5  -5.52384   ATTTTACGTAAGGCG            GAGCTGTCG GTA CGACAGCTC            TTTTTTTGCTGCGCC 100 30
HC661_RS07240 NONE
HC661_RS07245 1375220 .. 1375259 + -16.8  -4.67048   TATAAGCTTTGGGTG  AAATAAAAAAGATTGCCC GCAG GGGCAATCTTTTTTATTA   TTTATTTTCCGATAA 100 20
HC661_RS07255 1378521 .. 1378553 +   -12  -3.90112   TAAAAAATAACAAAT      GAAAGGGCGGCCGA ACATC TCGTGCGCCCTTTC      TTTCATTCAGGAAAA  91 31
HC661_RS07260 1380518 .. 1380536 +   -11  -3.70149   CGAAACAATAAAAAA             CAACGGCG TTA TGCCGTTG             TTTAAATAGTCTGCA  83 30
HC661_RS07275 1383176 .. 1383196 + -12.6  -5.00616   ATTGAATAGAAAAAA            GCCGATGC ATAAC GCATCGGC            TTTTTTGCGGCGGAA 100 32
HC661_RS07300 1387537 .. 1387566 +  -9.4  -5.26907   GATTATTTTGCAAAA       CAAGCGAACG TTAAAGCCGC CGTTCGCTTG        TTTTATTTTCTATTC 100 54
HC661_RS07305 NONE
HC661_RS07310 1389534 .. 1389551 +  -5.5  -6.15536   ACGGGTTACTTTAAA             GCGGC TGCTGTAT GCCGC              TTTTTTTTGTTCATT 100 27
HC661_RS07315 1390253 .. 1390266 +  -4.5  -2.95906   ACCAAGCTTCCGGTC               TTCCG CAAG CGGAG                CTTTATAAAATTATG  49 63
HC661_RS07320 NONE
        abbA 1391206 .. 1391228 +  -3.5   -5.4505   AGCGGCCTATAAATT           GATACTC GATTGCAAA GAGTATC           TTTTTTATTGACGGA  79 43
HC661_RS07330 1391766 .. 1391800 +  -5.9  -4.18018   TCATATCAGATCATT     GAATAAGTAGGCT CGCACGATC AGCCTATTTGTTC     TTTTGCATGCCGGAA  67 16
        ccpC 1392800 .. 1392817 +  -9.9  -6.47325   CGCCCATTTTAGAAA             GACAGCA ATCA TGCTGTC              TTTTTTTTATTTTTT 100 29
HC661_RS07340 NONE
HC661_RS07345 NONE
HC661_RS07350 1394742 .. 1394757 +  -2.6  -4.12868   TGCAGCCAGCCGGCA              GAATAA AGGC TTGTTC               CTTTTTTTCTTGTCT  55 20
        dapD 1395559 .. 1395582 + -12.5  -4.06864   TGGTTTGATAGAATG          GGCGTGGAT GATAAA ATCCACGCC           TTATTCTTATCTCAA  93 45
HC661_RS07360 NONE
HC661_RS07365 1397051 .. 1397068 + -11.3   -5.0916   ATTAAAAAGAAAAAA             CCGAAGC TTAC GCTTCGG              TTTTTCTATTCGGCG  95 36
HC661_RS07375 1398669 .. 1398692 +  -3.9  -5.65177   TCTCGGTTCTGCAAA          CCCT-TTGCC GTTTA GGTAACAGGG          TTTTTTTGTGCCTAT  85 67
HC661_RS07380 1399688 .. 1399708 +  -9.7  -5.49809   ATAAAACAGTAAAAA            CTGCTTGCG TTA CTCAAGCAG            TTTTTTTGCGCTTTC 100 37
HC661_RS07390 NONE
HC661_RS07395 NONE
HC661_RS07400 NONE
        mobB NONE
HC661_RS07410 NONE
        moaD 1405009 .. 1405035 + -13.1   -5.4251   GAGGGTGAAAAAAGA        GCCGGATGTGCA TCAT TGC-CATCCGGC         TTTTTTGTATATAGG 100 33
HC661_RS07420 NONE
HC661_RS07425 NONE
HC661_RS07430 NONE
HC661_RS07435 1409051 .. 1409071 + -15.5   -5.9362   TATGAATAACCGGCA            CCCCATGCA GTC TGCATGGGG            TTTTTTTGTGTTTTA 100 32
HC661_RS07440 NONE
        pfkB NONE
HC661_RS07450 1412917 .. 1412933 +  -7.2  -5.11613   AGAAATAAACAAAAA              GCGTCC TTTAC GGGCGC              TTTTTTCAATCATGT  86 33
        lepB 1413625 .. 1413654 +  -6.3  -5.63517   CAGACAAAATAAAAA       CGCCGCGCTGCCCG ATT TGGACAGCA-GGCG       TTTTTTATTTGGCAA  95 29
HC661_RS07465 1415718 .. 1415733 +  -6.8  -5.72622   ACGCGTAATAAAGAA              GCAGGG GAGA CTCTGC               TTTTTTATTTATGAA 100 33
HC661_RS07470 1416737 .. 1416754 +  -8.4  -5.80364   AGCGAAATAAAAAAA             GGAGGC CTGATC GCCTCC              TTTTTTTATTAAAAT 100 31
HC661_RS07490 1419875 .. 1419895 +  -6.8  -4.78839   CATAATCAGCAAAAA            GGGCGGAG CATCA TTCCGTCC            TTTTATTATGAACTT  81 36
HC661_RS07495 NONE
HC661_RS07500 NONE
        ktrC 1422881 .. 1422898 +  -4.8  -4.03793   ACACAAAGTGAAAAG             CCGTCT GTAAAA GGACGG              TCTTTTATTATGTCA  63 30
         ade 1424764 .. 1424784 + -11.2  -5.76949   GCTGCAATAAAAAAA            CTGCACTC ATTAC GAGTGCAG            TTTTTTTTAGACCTC 100 31
HC661_RS07525 1427804 .. 1427831 + -12.8  -4.60041   CTTTTGAAATAAAGA        AAACCGGCACTT TGGG AAGTGCCGGTTA         TTTTTAACGGTCAAT 100 29
HC661_RS07540 1429864 .. 1429882 +  -6.1  -6.11229   GCTTTTGCTTTTAAA             CCTTTAT CCGGC ATAAAGG             TTTTTTTATTTTGCT 100 326
        fabD NONE
HC661_RS07550 NONE
HC661_RS07555 1449386 .. 1449396 +  -2.4  -3.86015   TAGTTTATCATTTTG                 CGGC AGT GCCA                 TTTGTAAAGGGGATG  51 38
HC661_RS07560 1458379 .. 1458408 +  -5.7  -4.14511   TTACGTGACTTCCGG       CGAGCGTTTCG AAGATTGC CGGAACGGTCG        TTTTACAATGAACTT  67 287
HC661_RS07570 1471310 .. 1471326 +  -5.9  -3.42083   ATACAGAAACAATTG              GAAAACG GAT TGTTTTC              TCTTCTGTATATTAC  56 487
HC661_RS07580 NONE
HC661_RS07585 1483265 .. 1483293 + -17.5  -3.18383   TAATTGTCAAAAGCG        TCGTCCCGTCTGT CCG GCAGGCGGGACGA        TTGCTAACTGCCCGT 100 38
        pdhA NONE
        pdhB 1485843 .. 1485857 +  -2.1  -3.48593   ATAAAAGACGGTAAA               GAGAG TCCTT TTCTC               TTATATGAAGGAATC  47 50
        pdhC NONE
        lpdA 1488704 .. 1488731 + -17.8  -5.18726   AATGCAACAAAGAAA        CAGCCCCCGTTT GTAA AAGCGGGGGCTG         TTTTTATTGTGCAAG 100 42
HC661_RS07620 1490395 .. 1490436 + -17.5  -4.21631   AAGAAGAGTAAAAAG CGTAAAAAGGCCCGAAACG ATTT CGTTTCGGGCTTCTTTATG  TTTATTGGATGGCTT 100 30
HC661_RS07630 1492362 .. 1492382 + -10.3   -5.1523   CAAAATGTAGACAAA            GCGAGCCGG CAA TCGGCCCGC            TTTTTATGTTATGAG  93 31
HC661_RS07640 1493462 .. 1493482 +  -4.7  -4.65895   AAAGAATAGTAAAAA            CGAACCG CAGGAAA TGGTTCG            TTTTTACGTGAGAAG  69 39
HC661_RS07645 NONE
HC661_RS07650 1494839 .. 1494860 + -14.5  -5.95539   TTCAGATATAAAAAA           GAGACCGGA TTTC TCCGGTCTC            TTTTTTTGTTTACAA 100 46
HC661_RS07660 NONE
HC661_RS07665 NONE
HC661_RS07670 NONE
HC661_RS07675 1499772 .. 1499793 + -10.1  -4.33165   GCTGATTTAAAAAAA           CGCCCGG CTGAATGA CCGGGCG            TTTTAATCCGTTTAC  90 31
        typA NONE
HC661_RS07695 1503236 .. 1503292 + -12.9  -5.24449   AAAAAGCCAGTCAGC TAAACCGCAATAAAAAAATGACCTTGCC TTCC GGCG-GGTCATT-TTTTATT-CGGTTTA TTTTTTCAGTTTATC 100 13
HC661_RS07710 1505875 .. 1505890 +  -3.2  -4.44046   GATTTTGAAATAAAT              GCGC ACAGGACA GCGC               TTTCTTTCGGCTCGG  63 192
        glsA NONE
HC661_RS07725 1507625 .. 1507654 +  -5.1  -5.52909   ACTCAAACTATTCAA       CGGTTTG-GGTTTT TTT ATAACCGTAAACCG       TTTTTTTGCATCTTC  87 49
HC661_RS07730 1508995 .. 1509006 +  -2.2  -3.05022   TAAAAAGACGGCAGA                CGGA AAAA TCTG                 TGTATCTCTAAAAAA  42 3
         pyc 1512602 .. 1512625 + -13.9   -4.3586   TTTTATATGTAAAAA          GGCCGAAGC TCTAAT GCTTCGGCC           TTTTCATGTGCCTCA 100 88
HC661_RS07745 1514980 .. 1514994 +  -4.2  -3.86944   AGGAAAAGAAGTATT               TCGGCT GGA AGCAGA               TTTACTGCTTGTGCA  57 180
        coxB NONE
        ctaD NONE
HC661_RS07760 NONE
        ctaF NONE
        ctaG 1519887 .. 1519907 +  -9.8  -5.52096   GTCTCATGAAAAAAA            GTACAGCA GAATA TGCTGTAC            TTTTTTATTACATTT 100 32
HC661_RS07780 NONE
HC661_RS07785 1521988 .. 1522012 +  -5.7   -5.9667   CTTGGCAGTAAAAAA         CCGCAGAGGGG CGCGT CCCC-C-GCGG         TTTTTTTATGTTTTT 100 30
HC661_RS07790 NONE
HC661_RS07795 1522864 .. 1522877 +  -2.3  -2.79116   TTTCATGGTAAACTA               GCAAC TGGA GGTGC                GTATTTATGTATGCA  41 76
HC661_RS07800 1523332 .. 1523351 + -12.2   -4.1899   GATGCAAAGTTTCCT            GACGAGAC GGCC GTCTCGTC             TTTTACATAAAATGA  95 24
HC661_RS07805 1523671 .. 1523690 +   -15  -2.96822   GGCATATAAAAAAAT            CCCCGCAG ATAC CTGCGGGG             TCCTTCTATTCCTTA 100 32
        rsmD NONE
        coaD 1524999 .. 1525028 +  -7.9  -5.64274   ATGCAGAAATTTAAA       GGATGAGAAGC GCTGATTG GCGTCTCATCC        TTTTTTTGTCCGTGC 100 20
HC661_RS07825 NONE
HC661_RS07830 1528414 .. 1528443 +  -5.8  -5.63517   ATGAGAGAAAGAAGA       GAGCTTGCTG-AC GAGAG GTGCGGTAAGCTC       TTTTTTCTTTGCCGA 100 203
HC661_RS07840 NONE
        rpmF 1530439 .. 1530472 + -16.9  -5.76949   CAATTAATGTATGAA     GAAAAGCGCGGGAAT CTCG GTTCCTGCGCTTTTC      TTTTTTTTGCCCCTC 100 34
        gerR 1531170 .. 1531196 +  -9.2  -5.55769   AGCCTGTAAAATGAA         CCGGCCTGGGGG CGG CGGCCCGGCCGG         TTTTTTATTATGCCG 100 32
HC661_RS07860 NONE
        bshC 1534454 .. 1534470 + -10.9  -6.32216   TAAAGTTTTAAAGAA              CCCTGAA TAG TTCAGGG              TTTTTTTTTATGTGT 100 43
        mraZ NONE
        rsmH NONE
        ftsL NONE
HC661_RS07885 1538552 .. 1538577 + -16.9  -5.24129   GATTAACGGGACAGA         GAAGTCCGCGG ATGC CCGCGGGCTTC          TTTTTTATGCGCCGC 100 35
HC661_RS07890 1540584 .. 1540611 + -17.1  -3.40403   AGAATGAGTCTTTTT        GAGGCAGCCGA TTGTTT TCGGCTGCCTC         TTATCATAAAGAGAA 100 34
HC661_RS07895 NONE
HC661_RS07900 1543778 .. 1543791 +  -3.8  -3.45023   AATATCGGCACTGTC               GCCA GTGAAG TGGC                TTATCATGCTGATGG  52 479
       spoVE 1545906 .. 1545925 +    -5  -3.41393   AGACAACATCAATAA            CCCTGT CCTAAAAA ACAGGG             TTATCGCTATGTGAT  54 91
        murG NONE
        murB 1548034 .. 1548059 +   -12  -4.65895   ACTTTTAACAAATGT         CAAACGGCAT CACAGC ATGCCGTTTG          TTTTTCAATCAGACG  95 74
HC661_RS07925 1549064 .. 1549079 +  -6.2  -3.77484   AATGGGCGTGTCTTC              TGCAAT GAGC ATTGCA               TTTGGAATTTTCCTC  64 187
        ftsA NONE
        ftsZ 1551959 .. 1551982 + -11.8  -5.54907   GGCTGATGTAAAAAA          GGACAAGACC ACAT GGTTTTGTCC           TTTTTCTTTTGTGCA 100 35
HC661_RS07940 1556522 .. 1556544 +   -12  -5.26875   AATGAGTAAAACAGA           GCGCTGCC AGATCAC GGCAGCGC           TTTTTTAGTTGAAGC 100 32
     spoIIGA NONE
        sigE 1558459 .. 1558487 +  -3.7  -2.94105   TTCCATCTGACAGCC        CTTACTGCTGCAA GGA TTGCCGCAGCCGG        ATGTTTATTTCTGTA  47 47
        sigG 1559369 .. 1559391 + -13.6  -5.15634   TCAATAACGGAAAAA           GCCTTTAAAC CTT GTTTAAAGGC           TTTTTTCATGCGATG 100 34
HC661_RS07960 1560413 .. 1560439 +   -11  -5.14563   AAGATCCGTTTTTCA         CCCGTTTTATTT CAT GAATGAAACGGG         TTTTTTGATACAGCC  93 152
HC661_RS07965 1561759 .. 1561769 +  -2.4  -3.29471   CGAGGTGACAAGGTT                 CAGC CAG GCCG                 TTCATATAATAGGAA  45 33
HC661_RS07970 1562051 .. 1562070 +  -7.1   -3.9941   TGTAAACGAACCAAA            GGGGGGA GAGTAA TCCTCCC             TTTACTTGTAAAAAG  73 13
        pgeF 1563050 .. 1563063 +  -3.1  -3.17794   TCGGAATGAAGGAGG               CGTAA GATC TTGCG                TGTTGCTGATCAATT  46 21
HC661_RS07980 NONE
HC661_RS07985 NONE
HC661_RS07990 1564510 .. 1564529 + -13.6  -3.40597   CGACAGTTTGATACG            GGCTTGGC ACCA GCCAAGCC             TCTTTACATAGAAAG  95 44
HC661_RS07995 1565312 .. 1565336 +  -2.1  -5.65177   AAAGTTACATTTGAA          CGGCAAAAATG AGT CGTTTTTTCAG          TTTTTTTCTCCATCT  80 14
      divIVA 1566186 .. 1566215 + -12.9  -6.37666   GGTACCGCGAGATAA       GCTTTCTCGTCCC TTAT GGGATGAGAGGGC        TTTTTTTTATTTTCT 100 299
        ileS 1569032 .. 1569053 + -15.1  -5.47218   ATAATGAATGAGAAA           GCGCCCGGT GACA GCCGGGCGC            TTTTTTTACATGCCA 100 37
HC661_RS08010 1569525 .. 1569551 + -10.2  -3.67141   GATTATGCATATGAT         CAGGCGCTGT ATGAGTG ACAGCGTCTG         TTTGCATGCGCTTAT  80 8
        lspA NONE
HC661_RS08020 1571148 .. 1571172 +  -8.6  -5.68489   CGTCCTGGAAAGGAA         CCCCTCTATGC TCTG GCA-GGAGGGG          TTTTTTCTTCTTATA 100 152
        pyrR 1571843 .. 1571867 + -10.1  -5.63504   GCCGGGTTTTGTATG          CCTCTTTGC GCAAAAA GCAAAGAGG          TTTTTTTATACCATT 100 113
HC661_RS08030 1573298 .. 1573322 + -12.2  -5.43866   TTCTCTCTTTAACCG         CACCCCGAGTC TATA GAC-CGGGGTG          TTTTTTTCGGCCTTC 100 104
HC661_RS08035 NONE
HC661_RS08040 NONE
        carA NONE
        carB NONE
HC661_RS08055 NONE
HC661_RS08060 NONE
        pyrF NONE
HC661_RS08070 1583079 .. 1583101 +  -9.2  -5.36441   ATACCGGGTCACTGT           CTTTCATTCC GCT GGATTGAAAG           TTTTTTATATGAAAA  95 249
HC661_RS08075 NONE
HC661_RS08080 1585007 .. 1585019 +  -2.7  -2.71712   GTTAACTGGGAGGAA                TCATG TAT TATGA                GTTTAGCACCGCACG  41 65
         sat NONE
        cysC 1586923 .. 1586939 + -10.1  -3.63515   TTATCGTTGGAGCCG              GTCCGGG AGA TCCGGAC              TTATTAACGGTGAAG  80 177
HC661_RS08105 1589196 .. 1589232 + -17.5  -2.75795   ATACGTAATAAAAAA    CACCTCCAAGCTGAG TGCGGGT TTCAGCTTGGAGGTG    CGTTTATTTTTTCAG 100 300
HC661_RS08115 1593756 .. 1593778 +  -8.5  -5.13722   ATGATATAATCTTAG           GGGTAATAG CATGT CTATTGCCC           TTTTATTTTGATAAC  90 47
HC661_RS08120 1594734 .. 1594745 +    -3  -4.07568   CTCTTCAGGTTACAC                TAGA GACG TCTA                 TTTTACAGGGGGAAC  55 68
        remA NONE
         gmk NONE
HC661_RS08135 1595877 .. 1595904 +  -7.9  -5.58209   AATAACAAGCACACG        TAGCAACCTAT CTCTAC ATAGGTTGTTA         TTTTTTTCCGTTTGG 100 36
       coaBC NONE
        priA 1599577 .. 1599591 +    -5  -4.56597   ATGAATCCGTACATG               CTGATG TAA CATTAG               TTTTTGGAGGGCAAA  71 17
HC661_RS08150 NONE
HC661_RS08155 NONE
        rsmB NONE
        rlmN NONE
HC661_RS08170 NONE
        pknB 1606190 .. 1606205 +  -3.2  -2.57881   GACAAGGAGGGACCC              TATGCC TGAG GGCAAA               ATTATAAAAGCGTTA  43 39
        rsgA NONE
HC661_RS08185 1607750 .. 1607773 +  -6.7  -4.16943   AAACATGCTGAAAAA          GAGCCCGGTG AAAGC CGCCGG-CTC          TTTTCGCGTCTAAGA  73 39
HC661_RS08190 NONE
HC661_RS08195 1608655 .. 1608679 +   -10  -3.89085   TGAACGCATAAAAAA          CGCCTGCC GCATAAAAG GGCAGGCG          TTCATTTTTGCTTAT  84 67
HC661_RS08205 NONE
HC661_RS08210 1611178 .. 1611208 +   -12  -3.53841   TATATATTTGCGGCA       GAATAAAAGGGCTT ATC AGGCCCTTCTATTC       TTATGCCTTTATTTA  89 20
       sdaAB NONE
       sdaAA NONE
        recG NONE
        fapR NONE
        plsX NONE
        fabD NONE
        fabG 1618351 .. 1618363 +  -3.4  -5.00616   TTTTAAAATTTCATC                CTAG TTTCT CTAG                TTTTTTAAAAACGAA  70 49
        acpP 1618659 .. 1618678 +  -8.5  -3.64682   AAGCTGATGCTAAAA            GTCCCGC CTGACA GCGGGGC             TTTAGCCCTTTAATC  73 39
        rncS 1619536 .. 1619557 +    -8  -3.75535   TACGAAACAATAAAA           TCCCCCTG TATCCC TAGGGGGA            TTTCAGTATGTCTGC  70 28
         smc NONE
        ftsY 1624216 .. 1624244 +  -9.8  -5.61596   TTAATGAATAAAAAA        CGAGTATAAAAT GGACG GTTTTATACTCG        TTTTTTTATACGGAT 100 37
HC661_RS08275 NONE
         ffh 1626868 .. 1626888 +    -4  -3.61398   TACCTTTTATGTAAT            CGGTTATA CATGA TAAAACCG            TTGTTAAGAAAAAAC  52 27
        rpsP NONE
HC661_RS08290 1627495 .. 1627515 +  -3.9  -5.42259   ATTTGACTGAAAAAG            GGAGAGG GCCGGCA CCTCCCC            TTTTTTTACACGTAA  82 31
HC661_RS08295 NONE
        rimM NONE
        trmD 1629269 .. 1629280 +  -2.2  -3.50853   AAGATACTACTTGTG                GCTT AAGG AGGC                 TTATCCTTCAGAAGC  47 71
        rplS 1629728 .. 1629751 + -10.4  -5.71712   GATAACGAACGAAAA          GAGCTTGTTA CCCG TAACAGGCTC           TTTTTTTATATGAAA 100 42
        ylqF 1630700 .. 1630727 + -11.4  -5.00884   GAAACACCATCAGAA        TAAAGACGCGCA GCGA TGCGGGTCTTTA         TTTTTTCCGCAGAAT  95 23
HC661_RS08320 NONE
HC661_RS08325 NONE
HC661_RS08330 NONE
        sucC NONE
        sucD 1635810 .. 1635836 + -16.6  -4.72272   ACGCACTGATCGAAG         CAGGGGCAGCCG TAA CGGCTGTTCCTG         TTTTTGCTGAAAAAA 100 32
        dprA 1636771 .. 1636789 +  -6.8  -3.57908   GGAACCCTTTTGAAA             TATCGTTT GAC AAACGGTA             TTGTAATATTTAATA  64 28
        topA 1639027 .. 1639048 + -10.9  -4.14627   AACCACAGAAGTAGC           GGTGAGCAG AGCC TTGCTCACC            TTCTTTGTGTGGAAG  90 27
       trmFO 1640378 .. 1640397 +    -5  -3.24414   TTGAGACTATTCAAA            CTATTTCG AAAA CGATATAG             CTTTTCATTGCAACT  53 6
        xerC 1641387 .. 1641397 +  -3.2  -2.72761   TAAAGAAAATTAAAA                 GGAG GCC CTTC                 TCATGTCATCTTTTC  43 28
        hslV NONE
        hslU NONE
        codY 1644190 .. 1644217 +  -8.4  -5.24531   CTCATTAAGACAAAA        GCAGGATCCCTG AAAA TGGGGGTTCTGC         TTTTTTATGGACAAT  93 33
        flgB NONE
        flgC NONE
        fliE NONE
        fliF NONE
        fliG 1648506 .. 1648541 +  -6.8  -2.87132   CCGAAAATCCGGAGG    CTCTCATGGCTTTTGC CAAA GCAGAAGCCGACAGGG     TGTCTGAAGAAGCGA  57 142
        fliI NONE
        fliJ 1651049 .. 1651066 +  -2.6  -4.09739   AGCCGATTCAGGAAA             CAGCCG CTAAAA CGCCTG              TTTTAAAAGAATTGG  55 176
HC661_RS08425 NONE
        flgD NONE
        flgG 1654129 .. 1654141 +  -6.9   -3.3344   AAGGAGGGAGGAGAG                GCGGT TAG GCCGC                TTCTCCGGATTGCAT  62 39
HC661_RS08440 NONE
        fliL NONE
        fliM NONE
        fliY NONE
        cheY NONE
        fliZ NONE
        fliP NONE
        fliQ NONE
        fliR NONE
        flhB NONE
        flhA NONE
        flhF NONE
HC661_RS08500 NONE
HC661_RS08505 NONE
HC661_RS08510 NONE
HC661_RS08515 NONE
HC661_RS08520 NONE
HC661_RS08525 NONE
        sigD NONE
HC661_RS08535 1670941 .. 1670953 +  -4.8  -3.28924   TTTATGCAGAGGGTG                CTGC AAACG GCAG                TTCTGCACAAAAATG  54 98
HC661_RS08545 1672776 .. 1672800 + -10.8  -4.61633   GCTTTTCAGGCAGTA          TAGGGGACAC TACTT GTGTTCCCTA          TTTTTAAAACTATAT  91 70
HC661_RS08550 NONE
         frr 1674186 .. 1674222 +  -2.4  -3.29038   GTACAATAGATAATG    TGAAAAGACCCTCT CATGTTTAC AGGGGGTTTTTTTG    TTAATACTGTTGATT  45 52
HC661_RS08560 NONE
HC661_RS08565 1675856 .. 1675875 +  -3.6  -2.62983   ATACTTTCTGCTTGC            GCTTTTTT CATG AGAAAGGC             TAATATGAAAATAAG  43 13
HC661_RS08570 NONE
        rseP NONE
        proS 1680125 .. 1680150 +  -7.5  -3.26188   ATAGAGAAAAAAGAA         GGTACCTCATC ACCT GCGGAGGTACC          TTCACTTATGATGTT  63 74
HC661_RS08585 1684596 .. 1684613 +  -9.1  -4.66537   GATTACCGAGGCAAA             GAGTGGG GAAA CCCGCTC              TTTTGTATTGAACAG  89 120
        rimP NONE
        nusA NONE
        rulR NONE
HC661_RS08605 NONE
        infB NONE
HC661_RS08615 NONE
        rbfA 1689784 .. 1689820 + -15.3  -2.74784   CCGTCTGAATAACAA    GGAAAGAGGATGGGCGA GTG TCGTCTGTCCTCTTTTC    TGCGTTTTACGGGAT  95 29
        truB NONE
        ribF 1691785 .. 1691796 +    -3  -3.70902   AAAGTACACAAATTT                TCTT CTAA AAGA                 TTTGCATATGGGCGC  50 55
        rpsO 1692200 .. 1692215 + -10.4  -5.36965   CGATAATCGTAAAAA              GCGGGA GGAT TCCCGC               TTTTTTATCGTATTA 100 35
         pnp 1694504 .. 1694525 +  -8.7  -4.64861   ATGAAAACCTAACAA           GGAGCCTGGG AGA CCC-GGCTTC           TTTATTTTGAGAAAG  87 41
HC661_RS08645 1695561 .. 1695577 +  -6.5  -3.40597   AGGCTGATGAAGTAG              CAGGCGG CAG TTGCCTG              TCTTTGAATAGGAGG  60 26
HC661_RS08650 1696846 .. 1696870 +  -5.6  -6.15828   CTTAATCGGAAAAGC          AGTCTGCCTC TATAC GGGGCAGGCA          TTTTTTTTTGCTCCG 100 36
HC661_RS08655 1697192 .. 1697214 + -14.9  -5.14563   ATTCATTTTTTGCAA           GCACCGGCT CATAC AGCCGGTGC           TTTTTTCATGAAAAA 100 46
        dpaA NONE
        dpaB 1698856 .. 1698868 +  -3.4  -3.34902   GAATAAAAAAATTCG                GTCA ATCCG TGAC                TATTCTATGGTAAAA  48 69
         asd 1700013 .. 1700046 + -15.5  -3.06302   TTTTCTATAGGCGAA     CAGAAGAGAGTAAGGC TCT GCCT-GCTCTCTTCTG     TTACGTCAGACTAAT 100 51
        dapG NONE
        dapA 1702217 .. 1702249 +  -4.1  -4.56961   TACAGTTAAAATACG      CGGTCATTCTCAT TTTTATC GTGAGTTTGACCG      TTTTGTATACATATT  66 52
HC661_RS08685 1704043 .. 1704073 + -17.7  -5.16841   GAAGTATAATGTATA       CAAAGCCGGAGCG CATGA TGCTCCGGCTTTG       TTTTTGTTCATGTCC 100 32
HC661_RS08690 1704876 .. 1704892 +  -3.7  -3.90318   AGAGCGAGGAAGGAA              GGATGAT TCA ATGATCC              TTTATACCGTCATGC  57 12
HC661_RS08695 1705159 .. 1705177 +  -7.4  -4.74215   ATCCTACAGAAAAAT             GCAGCC GGCAAAA GGCTGC             TTTTCTTCATGATGT  83 89
HC661_RS08700 1707579 .. 1707601 + -11.4  -4.18494   GAACAATATGATGAG           CTCTCTTCTT AAA AAGGAGAGAG           TTTTCACTGAAAATG  93 14
HC661_RS08705 1708443 .. 1708461 +  -7.4  -5.95539   AAAACGTTTTTAAGA             CAGACGCG TCA TGTGTCTG             TTTTTTTATTTGCCG 100 28
HC661_RS08710 1709772 .. 1709792 +  -8.3  -6.17669   AAAGGAATCATTAAA            GACGGTGTA ATC TGCACTGTC            TTTTTTTATTTTATT 100 16
HC661_RS08715 NONE
HC661_RS08720 1713472 .. 1713495 + -14.6  -5.72053   AAATAACGTTCAATG          CCTCTGCCTG TTTT CGGGCAGAGG           TTTTTTGTTTCCTTA 100 35
HC661_RS08735 NONE
HC661_RS08740 1717293 .. 1717312 +  -7.8   -5.9362   AACAGCACTCATTAA            GAGGGGGG ATTT CTCCTCTC             TTTTTTTATGTTTTC 100 26
HC661_RS08745 1718194 .. 1718204 +    -4  -4.87626   GATCAGACCGGTTTT                 TCAA GCT TTGA                 TTTTTAATATTGGAA  71 8
HC661_RS08750 1719140 .. 1719162 +  -7.8  -5.08601   AATAAAAGGGGAAAA           GTCATCTGAA CGA TTAAGATGAC           TTTTTCTTCACGTCC  88 36
        pgsA NONE
HC661_RS08760 1721119 .. 1721151 +  -2.7   -5.4505   CTCTTTTACAGAAAA      GCGAACGCGGA AAAAATCCGAA TATGCGTTCGC      TTTTTTCTTGGCAAA  78 93
        recA 1722280 .. 1722303 +    -6  -5.82281   AAAGCACGATCAAAA          GGGCGGAA TAAGCAAT TTCCGCTC           TTTTTTTGTGTGTTT 100 40
HC661_RS08770 1723784 .. 1723819 +  -8.4  -2.80895   GTTAAACCATTTAAA    CTTGACAAGGGCATGAG AGA CTCATTCCC-TGTGAAG    GTTCTGTATGTTGAG  66 196
         rny 1725463 .. 1725489 + -12.5  -5.47821   GTAGAGTATGCAAAA         TAAAGTGATGC TTAGC GCATCACTTTA         TTTTTTTGAGTCCCT 100 23
HC661_RS08780 1726466 .. 1726487 +  -5.9  -2.66711   AGCAACATCTAATAA           TGATTGTTC TAAT GAACACTCA            CTTATCCATTGTAAA  51 171
       spoVS 1726801 .. 1726829 + -13.2  -5.34365   AAAACATGACATTCT        CAACCTGCTTGC GTAAG GCGAGCGGGTTG        TTTTTATTGTTGTCA 100 46
         tdh NONE
HC661_RS08795 1729276 .. 1729293 +  -7.7  -5.82036   CTGCAGCTTGTGTAA             GGGGGAA ATGA TTCCCTC              TTTTTTATTTCTTAT 100 26
        miaB NONE
HC661_RS08805 1731383 .. 1731405 +    -7  -6.44931   GCTGTTCTATTTAAA          CACGGGGCC TTCATC GGCCC-GTG           TTTTTTTTTGTTATT 100 27
        cotE 1732185 .. 1732215 + -11.8   -5.4251   CCTGAAGAATAAGTT       GAGGCTAGGGGAGT TTA ACACCCCAAGTCTC       TTTTTTATATATAAA 100 29
        mutS NONE
        mutL 1736839 .. 1736861 +  -4.2  -5.33848   ATTTTAGCTGTTTAG           GTATTCATCA AAC TGATTAATGC           TTTTTTGATTGTGAT  78 89
HC661_RS08830 1738304 .. 1738335 +  -7.4  -5.59879   TGAATATAGAAAAAA      CGTGTTTTGATCAA TCTT TTTTTCAAAACACG       TTTTTTCTATTTGTA 100 144
HC661_RS08845 1742386 .. 1742398 +  -4.1  -2.73468   AACGCCGGGCAGGCC                GGATG GGA CATTC                TGCTTACGCCTGTTC  45 162
        fabD NONE
HC661_RS08855 NONE
        fabD NONE
HC661_RS08865 NONE
HC661_RS08870 NONE
HC661_RS08875 NONE
HC661_RS08880 NONE
HC661_RS08885 NONE
HC661_RS08890 NONE
HC661_RS08895 NONE
HC661_RS08900 NONE
HC661_RS08905 1812382 .. 1812403 + -11.5  -5.77988   AAACGGTAATAGAGA           ACGGCCGGA GCAA TCCGGCCGC            TTTTTTTATCTATAT 100 32
HC661_RS08915 1814450 .. 1814465 + -10.4  -5.69473   ATCGTTCAGTAGCTT              CTCCGG TTCG CCGGAG               TTTTTTTATGCTCTG 100 29
HC661_RS08920 1815267 .. 1815284 +  -7.7  -6.01725   AAACCAATAAAAAAA             CGCCGCTG ATT CAG-GGCG             TTTTTTCTTTTTATT 100 31
HC661_RS08935 1817634 .. 1817646 +  -4.7  -6.09133   CGCCCCTGAAAATTC                GGGCG TTC CTCCC                TTTTTTTTTGCCCTC 100 69
HC661_RS08940 NONE
HC661_RS08945 1819071 .. 1819097 + -11.6  -5.91981   CCGCGCTTGACGAGT         TCAAACGGTCAG CTC CGGGCCGTTTGA         TTTTTTTTAGCTTTT 100 31
HC661_RS08965 NONE
         hfq 1822014 .. 1822030 +  -6.6   -4.9725   AGACTTTTTGAAAAA              GACCAT GAACA ATGGTC              TTTTTCTATGCGCAT  84 39
HC661_RS08980 NONE
HC661_RS08985 1822742 .. 1822773 +  -8.8  -4.15235   TACACATGACACCTT      GAGTAGGATGAGAG ATGA TTCTCGTTCTGCTC       TCTTTTTTGGGCGTT  82 97
        nrdI NONE
        nrdE NONE
        nrdF 1826380 .. 1826400 + -12.7  -4.28774   TTTGGCCAAGATGAA            GAGCAGATA TAA TATCTGCTC            TTTTGGCTTGAATGG 100 14
HC661_RS09005 1827067 .. 1827099 +  -7.7  -5.40004   CTTCAATAACAAAAA     ACCCCGTTCGTCCC AAAAAA GGGA-GAGCGGGGG      TTTTTTCATTTAGTC  93 32
       spoVK 1829140 .. 1829168 +    -6  -5.76237   GCGGCAGCTCACGAA        TAGACCTCTCAG CCGGT TTGAGGGGTCTC        TTTTTTATTTCTCTC 100 23
        hflX NONE
HC661_RS09030 1831830 .. 1831842 +  -4.9  -3.11178   GGCCGTTTGCAATTT                TCAAA GAA TTTGA                TGTTAAGATTCCTTA  53 40
HC661_RS09035 1832337 .. 1832349 +  -3.4  -2.98356   TTCATTAATCCGTTA                GCAA CTGTT TTGC                TATATACATTTACCT  45 33
        glnA 1833730 .. 1833756 + -11.6  -5.22943   GTATTAATCTCTCAA         TCCCTTGGCACT ATT GGTGTCAGGGGA         TTTTTTGGATTTGAT 100 34
HC661_RS09045 1834567 .. 1834577 +    -4  -3.27298   TGCTGCTTCAATTAT                 GAAT AAA ATTC                 TTACTGATTAACAAA  50 4
HC661_RS09050 1835227 .. 1835243 +  -3.7  -3.42581   CAGAACAGACTGTGA              TGAAATC AGC GATATCA              TTCATCTTGATGTTT  50 57
HC661_RS09060 NONE
HC661_RS09065 1837689 .. 1837716 +  -4.8  -2.78816   TTCCCTTAATAAAAA        GA-CCAGGGTGTT GGT ATCACCCCGGCTC        TGTAATAAAAGCTGC  50 97
HC661_RS09075 NONE
HC661_RS09080 1842616 .. 1842634 +  -4.6  -3.51853   GCACATGAAAAAGGA             GATTTCTA TTT TAGAACTC             CTTTTTCATATTAGA  54 44
        xylA 1845558 .. 1845592 +  -5.9  -3.06501   GCCAAGTTCCCGGAA    TTG-CCCGTCATGA-AG TTA CTGTTATGGCGGGCCAA    TTCAATGGGGATCTA  53 88
        xylB 1847136 .. 1847160 + -12.9   -5.0916   ACAAAAATGAAGAAA          GAACCTCGCCA AAT TGGCCAGGTTC          TTTTTATATTGCACA 100 31
        ppsA 1849957 .. 1849983 +  -5.1  -6.02914   TTTTACTAAGAAAAG        CCGGA-ACCTCT TAGA GGAGGAATCCGG         TTTTTTTTATGTGAA 100 80
HC661_RS09110 1851988 .. 1852004 +  -5.1  -3.51924   TCAAACGTTCAGTCA              CATCTGC GCG GTGGATG              TTATGTGGCTGCAAG  56 473
HC661_RS09125 1854942 .. 1854963 +  -2.3  -3.84961   TCGGGAAACTCACTA           GATATTATC TTCT GATACTGTC            TTTAGTGATTCAATA  51 90
HC661_RS09130 1856273 .. 1856294 + -11.7  -4.91285   TGACAAATGAAAAAA           GCAATACCT TTTT AGGTATTGC            TTTTATTCTATTAAT 100 41
HC661_RS09135 1857015 .. 1857035 +  -5.4  -5.14965   TGGTGAGCGATACAC            AGTCAAGG TATTT CCTTGACC            TTTTTTAATGGCAAT  81 35
HC661_RS09140 NONE
HC661_RS09145 1858843 .. 1858885 +  -3.6  -3.85698   CCGTTTTGAAGGGAA GGGATACGCAAGTGAAAGT GCGAAG GCTTTC-TTTGAGTATCTC TTTATGCAAAAAGAA  54 467
HC661_RS09155 1859703 .. 1859718 +  -3.2  -3.91357   GTGAAAAAGAAATAA              GCGGAA TGTT TTCGGC               TTCTTCTGCTTCTGG  54 279
HC661_RS09160 NONE
HC661_RS09165 1861780 .. 1861790 +    -4  -3.47806   CAAAGGGAAAAGCGC                 CAAT CTC ATTG                 CTTTTTCCTATCAAG  52 124
HC661_RS09170 1862523 .. 1862553 + -11.3   -5.1166   AATCTATGAATTACT      GATCGGCTGCATGT TGAT ACAT-CGGCCGATC       TTTTTAATTTTAATG  95 39
HC661_RS09180 1863765 .. 1863784 +  -9.3   -4.4727   GTCCAGTTAAAAAAA            CTTGCGG GCGCTG CCGCAAG             TTTTCTCCGTATTAA  86 333
HC661_RS09200 1868192 .. 1868209 +  -9.9  -5.60993   AATAAAACGAAAAAA             GACTGCT TAAC AGCAGTC              TTTTTTTATGGAAAC 100 36
HC661_RS09205 1869438 .. 1869449 +    -3  -3.91072   TTGCCGGCGGGGCTT                TTTC TTTT GAAA                 TTTATGAAACTTTAA  53 55
HC661_RS09210 NONE
HC661_RS09215 1870492 .. 1870507 + -10.4  -5.41787   AAAATAAAAAGAGAA              GGAGGC GATT GCCTCC               TTTTTATGTTTTTTC 100 34
HC661_RS09225 1871552 .. 1871569 +  -4.8  -5.88197   GATTGAAAATAGATA             CTCGCT AAAGGC AGCGGG              TTTTTTTATATTTAA 100 35
        yneA NONE
HC661_RS09240 1873687 .. 1873699 +  -4.7  -3.94823   GTATATAATCAACAC                GCACC AAA GGAGC                TTATTATGATTTCTA  59 76
HC661_RS09245 1873946 .. 1873965 +  -6.5  -5.24989   TTCATTAAACAGAAA            GAATACG GCAATA CGTATTC             TTTTTTCGTATATAC  87 33
         tkt 1876119 .. 1876140 +  -8.8  -4.96106   AATAACGAGACAAAA           GAGGATGA GTCAAA TCATCCTC            TTTTTCCTGTTTATG  90 36
        sirA NONE
HC661_RS09260 1877051 .. 1877075 + -10.2  -4.16681   ACATGGTTATAAAAA          TAAAAAACCC GGAGA GGGTTTTTTA          TTTTGGCGTCATGTT  89 66
HC661_RS09270 1878160 .. 1878170 +  -3.2  -3.27786   CGGAGGATTTACCGG                 TCTG TAA CGGA                 TTAATAACTTTTGAA  48 19
HC661_RS09275 1878604 .. 1878623 +  -2.8   -4.2237   CGTTGGCCGGGTAAC            GGGAACGT AAAC GTGTTCTC             TTTTCAAATTGGTTT  57 16
HC661_RS09280 1879187 .. 1879207 + -11.2  -5.63517   TCAGATGAATTAAAA            CCTTTCCG TCCGC CGGAAAGG            TTTTTTATTTGAGCA 100 28
        acnA 1883648 .. 1883672 + -15.9  -4.82901   GCAGAATGAACAAAG          GAGAGAAAGCA GTC TGCTTTCTCTC          TTTTTATGCGGGAGG 100 40
HC661_RS09310 1884189 .. 1884211 +  -6.3  -5.88565   GAAATGAAAGAAAAA           CTGGATCTC AAATA GAGGTTCAG           TTTTTTTATTGTGAA 100 34
HC661_RS09315 NONE
HC661_RS09320 NONE
HC661_RS09325 1884891 .. 1884904 +  -8.1  -5.88197   CAATCATAATAAAAA               CCAGG GAAA CCTGG                TTTTTTTCTCTTTCC 100 32
HC661_RS09330 NONE
HC661_RS09335 1885709 .. 1885727 +  -8.9   -5.7946   AGGCTGTAAAAAAAA             GAACGCA TCCGC TGCGTTC             TTTTTTTCTTACACG 100 32
HC661_RS09350 1887264 .. 1887295 +   -11   -5.4505   ATAGGAACAAAAAAA      GCAAAAATCCTTGG CAAA TCAGGGGTTTTTGC       TTTTTTATTGAAAGA 100 37
        parE 1889641 .. 1889663 +  -3.4   -3.8901   GTCGCTGAGGAGGTT           TAATAGTGGC ACA GCCAGAATTA           TTTCATGATTTACCG  54 23
        parC 1892086 .. 1892116 +   -17  -2.70419   AGTAAAATTAAAATA       AAAAACCTCCGCTC ATT GAGCGGAGGTTTTA       CTATTTAGCTTTCAT 100 42
HC661_RS09370 1894445 .. 1894468 +  -5.3  -5.36441   ATAATTTTCAAAAAA          CTCCTTACA TTTTGT TGTGAGGGG           TTTTTTATGTGAAAA  87 53
HC661_RS09375 NONE
HC661_RS09380 NONE
HC661_RS09385 NONE
        uxuA NONE
HC661_RS09395 1899210 .. 1899222 +  -4.9  -3.45768   TGTCCCTGTCAGATT                GTAAA CCA TTTAC                TTCTGACTTATACTA  56 50
HC661_RS09400 1900263 .. 1900274 +  -7.2  -3.93556   TGCTCGCAAGGCAAT                CCGG ATAA CCGG                 TTTCATTGCATAAAT  71 18
HC661_RS09405 1901634 .. 1901660 +  -5.8  -4.48987   CATCAAAGCCACTGA         GGCTGTCCTG CCGATAA CGGGATGGCC         TTTTCGTTCTGCCGC  73 43
HC661_RS09410 NONE
HC661_RS09415 NONE
        yndJ 1904764 .. 1904784 + -10.4  -4.95155   ATAACTAGCTGCAGC            GCCGTCTG TTCAT CAGGCGGC            TTTTTCTCATCTACA  93 37
HC661_RS09440 1909118 .. 1909144 +   -11  -6.02914   AACAATAGGAAAAAA         CGGTTCTGTT ATTAATC AACAGAACCG         TTTTTTTTGTATAGC 100 33
HC661_RS09535 NONE
        galU 1964119 .. 1964138 +  -2.2  -2.56864   CTGAAGAAATCGTGC            GTTAAAAA ATAA TTTGTAAC             CATTTTGCTTGTCAA  39 21
HC661_RS09545 1964794 .. 1964832 +   -11  -6.02919   AAGACTGTGAAAAAA   GACTGCATAAGAGCGGCT GCG AGCCGGATCTATGCAGTC   TTTTTTTATTTATAC 100 31
HC661_RS09635 2017652 .. 2017668 + -13.7  -5.11613   TCATATAAGGAAAAA              GCCCGCT TAC AGCGGGC              TTTTTTCAATGATAT 100 33
         ggt 2020560 .. 2020588 + -16.9  -5.14682   AAATGACAAGACAAA        GCCTCGTTTCTCA AGC TGAGAAATGAGGC        TTTTGTTTATTCTGC 100 35
HC661_RS09675 2024775 .. 2024792 + -12.7  -4.42386   TTTCAATACGAAAAA             CCGGCTG ATCC CAGCCGG              TTTTATAAATAAACC 100 289
HC661_RS09690 2031928 .. 2031955 +  -6.3  -5.02231   ATCAATAAAAAACAA        ACCCGA-GCTTC AAAAC GAAGCCTCGGGC        TTTTTCATATTTTTA  83 33
HC661_RS09715 2035936 .. 2035948 +  -3.3  -3.87994   AAATGCTCTGGAACG                CCGGT AAA AGCGG                TTTATGAGCCTGCAT  54 6
HC661_RS09720 2036787 .. 2036808 + -11.5  -2.73875   AGAAGCTGTAAAAAA           ACGCCCCGA ATTT TCGGGGCGC            TGCTGTTAAGAAGCG  79 30
HC661_RS09740 2043394 .. 2043416 + -13.5  -4.20918   AGCTGCCATGAAAAG           CGGGAAGAG TTTTT CTCTTCCCG           TTTATTAAGATTCGC 100 410
HC661_RS09755 NONE
HC661_RS09760 2044712 .. 2044728 + -10.9  -4.46587   TGAAAATCTGATAAA              GCTCTCT AAA AGAGAGC              TTCTTTTATTAATCG  91 38
HC661_RS09795 2050538 .. 2050562 +  -9.4   -5.1861   AGTCAGTACGGCTGA         CATCCCTGTCT AAAA AG-CAGGGATG          TTTTTTAATCGTGCC 100 26
HC661_RS09805 2051799 .. 2051815 +  -9.3  -5.55664   CATCAATAGAAAAAA              GCCGCGC AGA GCACGGC              TTTTTTTAATAATAC 100 68
HC661_RS09820 2053995 .. 2054037 +  -8.7  -6.02914   AAAATGATAGATAAA CCCTCGTTAATATGGTGTAA TAGA TTAAACCAT-TTAAGGAGGG TTTTTTTTGTATCCG 100 41
HC661_RS09825 2055030 .. 2055049 +  -6.4  -5.45802   GCATTAATACATAAA            GACGGG AAAACCGC CCCGTC             TTTTTATTTTGACGC  91 34
HC661_RS09865 2061415 .. 2061429 +  -3.6  -3.75024   ATGGGAATGGCCATT               TTGAAA TGA TTTCAG               TTGTTCATCATCAAA  53 390
HC661_RS09875 NONE
HC661_RS09880 2062100 .. 2062123 +   -11  -4.62051   TTATATAATAAAAAG          GCCATCCGCA TGCA TTCGGATGGC           TTTTATGTGATATTT  91 33
HC661_RS09900 2064864 .. 2064888 +   -13  -4.80453   AGATTAATCAAACAA          GAAACTGCTG CCTGT CAGCAGTTTC          TTTCTTTTGTCATGC 100 34
HC661_RS09905 NONE
HC661_RS09910 2067680 .. 2067702 + -10.5  -3.15276   CCGCTTTATTAAAAA           AGCCCCCGT CTTGA ACGGGGGCC           TGCTTCTTTTGGTTT  75 29
HC661_RS09920 2070230 .. 2070265 + -14.8  -3.44622   GTTTTCATAACTGAA    CAAGGATAGGATAGGC TGCT GCCGCTCCTATCCTTG     TTGATTCTGCAGATC 100 31
HC661_RS09970 NONE
HC661_RS09975 2084981 .. 2085006 + -13.4  -5.65177   TCTGACACAAAAAAA         GGGATAAGGC ATTTCA GCCTTATCCC          TTTTTTTATCAGTCT 100 19
HC661_RS10000 2087854 .. 2087874 + -10.3  -5.68438   TTTAAGATAAAAAAA            CGGCCCGCG CGA TGCAGGCCG            TTTTTTCTTTAATAA 100 31
HC661_RS10010 2088701 .. 2088726 +  -2.4  -2.89212   AGGCTCAGTTTTTAA         CCGGGAAACT GTAAAA GGCCTCCCGG          CTTGTTCTGAATGAT  41 12
HC661_RS10015 2089154 .. 2089170 + -13.7  -4.48713   TGATCATTAAGAAAA              GGCTGCC TTG GGCAGCC              TTTGTTATTCATCAC 100 44
HC661_RS10025 2090266 .. 2090293 + -14.2    -5.252   GTAAGATGAAAGAAA        CCCTTAGTCCGC TTAA GCAGACTAAGGG         TTTTTTATAGGAATC 100 37
HC661_RS10040 NONE
HC661_RS10045 2093713 .. 2093732 + -11.4  -5.54079   CTTAACAGAAAGAAG            CCGGCACG TAAA TGTGCCGG             TTTTTTACTTTTTCC 100 36
HC661_RS10060 2097805 .. 2097833 + -14.6  -5.32699   TTCGCAAACAGAAAA        CACCCAATGCGC GAGCG GCGCATCGGGTG        TTTTTTACTATTTCA 100 50
HC661_RS10070 NONE
HC661_RS10075 2100445 .. 2100470 +  -7.6  -4.09963   CTGGTAATAAAGAAA         GCCCGCTT TCTATTTTTC AAGCGGGC          TTCTTCTTATTACAC  73 34
HC661_RS10090 2102364 .. 2102394 + -13.3  -3.09327   CTTTCCCAGACAATA      CGGAAGCCGGCTGA AGAT TCAGCCGGCC-CCG       TCTTACCTCGGCTGG  91 47
HC661_RS10110 2104305 .. 2104315 +  -5.4  -3.70438   TGTGGCCGATGACAC                 GGAA TAA TTCC                 TTTCCGTAGTCCTTT  59 435
HC661_RS10190 NONE
HC661_RS10195 2117278 .. 2117295 +  -9.9  -5.34055   TCTTCACATCAAAAA             GCAGCTT GGAT AAGCTGC              TTTTTTCATGTTTAT 100 46
HC661_RS10205 2119302 .. 2119313 +  -2.2  -3.29782   ATAAAATTCATCTAA                GTCA TCAC TGGC                 TTCATCCTGTTCTAT  45 128
HC661_RS10220 2120814 .. 2120834 +  -4.1  -3.28497   CACTCTAAATTTGTT            CTTAAAATT ACG ATTTTTAAG            TTAACTTTAAACTGC  50 43
HC661_RS10225 2121283 .. 2121306 +  -7.5  -5.47218   AGGAAAACACCTGAT          GGTAAAGAG CGTTGA CTCTTTGCC           TTTTTTTAGCTAACC  93 11
HC661_RS10235 NONE
        phrK 2123587 .. 2123607 +  -7.6  -5.56263   TTAAAAATTAATTTA           GCCCTACTC ATAT GAGT-GGGC            TTTTTATTTTATGAT 100 37
HC661_RS10250 2125146 .. 2125165 +  -6.4  -4.23528   AGTTGCAAAGCAAAA            GCCCCT CCTGAATA AGGGGC             TTTAATTTTAAATTA  71 53
HC661_RS10275 2129895 .. 2129912 +  -4.9  -5.96894   AGAATTAATTATTTT             GAAGTCCT CTG AGG-CTTC             TTTTTTTATTTGAGT 100 33
HC661_RS10285 2132389 .. 2132409 + -13.3  -2.78725   AAAACATAGAAAAAA            GGCCTGTCT GAT AGGCAGGCC            TCATTGCTGAGCTCT  90 32
HC661_RS10300 2133957 .. 2133980 +  -5.3  -6.22802   GCTGACACGAAAAAA          CACAAATCC CTGAAA GGATCTGTG           TTTTTTTTTATGAAA 100 36
HC661_RS10330 NONE
HC661_RS10335 2139537 .. 2139562 + -11.9  -5.60993   TATCTGAAATAAAAA         GCACAGCCTCT CTAT AGAGACTGTGC          TTTTTTTATGCACGG 100 34
        metA 2149385 .. 2149397 +  -3.3   -4.0342   ATAACTCCTTACGAT                GCATG AAG CTTGC                TTGTTGTTGATTACA  56 207
HC661_RS10395 2150578 .. 2150598 + -14.1  -5.86609   TATCGTAAAAGAAAA            GCACACGAA CGA TTCGTGTGC            TTTTTGTTTTTTTCG 100 33
HC661_RS10405 2151024 .. 2151043 + -13.6   -3.5486   CAGATGACAAATAGA            GGAGAGGC GTAT GCCTCTCC             TATTTGATTGCCGTC  95 58
HC661_RS10415 2151642 .. 2151666 + -15.9  -5.59655   GATGAATTCGAAAAA          TAAAACCGCAG AAG CTGCGGTTTTA          TTTTTTATTGATTTG 100 23
HC661_RS10430 NONE
HC661_RS10435 NONE
        sspL 2153858 .. 2153897 + -12.2  -3.05775   CAAAAAAAAGCAATA  CAAAACGCTAGAGGGATC AGCT GATCTCTCTGGCGTTCAG   CTTTTCGAGCATCCT  82 15
HC661_RS10480 2161703 .. 2161721 +  -8.1  -5.85178   CATATAACTGAAAAA             CCTGCCG ATATA TGGCAGG             TTTTTTTTACATATT 100 30
HC661_RS10490 2162794 .. 2162806 + -10.5  -5.04325   GTTACTAATATGAAG                GGGGC TTT GCCCC                TTTTTCTAGTTTCAC  93 298
HC661_RS10505 2165547 .. 2165564 +    -7  -5.79588   ACTAACCCTCTTGAA             CCCTTG TCACAT CAAGGG              TTTTTTTCGTTTTAG 100 305
HC661_RS10535 2171924 .. 2171951 + -13.6  -4.19974   AACGTAAAGATGCCG        GAGAAGACG-CTG TTT CAGGCGTCTTCTC        TTTGTTGCGGCTTTT 100 52
HC661_RS10585 2179864 .. 2179889 + -13.5  -5.27938   TTCCCTAAAAAATAA         GCATGAATGAT GGAT ATCATTCATGC          TTTTTATTTGAAGAT 100 26
HC661_RS10595 2180721 .. 2180746 + -13.3  -4.82855   CCCCTTTATATAAAA         GAAGGCAGCCG TTTT CAGCTGCCTTC          TTTTTCAATTTCATC 100 50
HC661_RS10610 2181715 .. 2181743 + -11.8  -5.09521   CGTAACACATCAGCA        GCCCGAAACC CCAGCGAAC GGTTTCGGGC        TTTTTCATTTCTTCA 100 36
        recU NONE
HC661_RS10625 2186192 .. 2186216 +   -13  -5.52384   CATTAGCGGACGAAA          TCCTTCACCT CAACC AGGTGAAGGA          TTTTTTTCATACAAA 100 35
HC661_RS10720 2203497 .. 2203512 + -11.8  -4.07089   AGACGATAATAAAAA              GGCGGC TTTT GCCGCC               TTTACTGTTTGTGTT  91 32
HC661_RS10900 2235608 .. 2235627 +   -10  -4.17657   TAAAAAACAGAAAAA            GGCATGCG GGTT CGCATGTC             TTTTAACGTCTGCTG  89 38
HC661_RS10990 2252037 .. 2252068 + -19.6  -5.82316   CTTTTTCGTCCTGAA      TAAGACTCCGGCTG TTAT CGGCCGGAGTCTTA       TTTTTTTTGCGTGAT 100 64
HC661_RS11000 2254790 .. 2254813 + -12.6  -5.54192   GTAACCAACAAAAAA          CCCAAAACAT TCAT ATGTTTTGGG           TTTTTTTACGTTAAT 100 37
HC661_RS11075 2268130 .. 2268142 +  -3.3  -3.08046   TTCCTTTTCATAGCG                CTGTG GTA CACTG                GTTTTAGCATAAAAG  45 74
HC661_RS11080 2268680 .. 2268703 + -11.8  -5.03994   AGAGAAGAAAAAAAA          GCAGAGGCTGA CGG TCAGCC-CTGC          TTTTTCTATATCAAA 100 15
HC661_RS11130 2276609 .. 2276635 +  -9.5  -5.82036   AGCTGAATGCAAAAA        GAGACCGG-ACG CCAT TGTTCCGGTCTC         TTTTTTATTTATTGT 100 35
HC661_RS11255 2297608 .. 2297622 +  -9.2  -5.47218   GATGAATATACGGCG               GCCGCG GCA TGCGGC               TTTTTTTCGGTCCGC 100 269
        mciZ NONE
HC661_RS11275 2300286 .. 2300307 + -10.1  -4.74787   TCTTAAATCATAAAA           CCGGCACCT TTTC AGATGCCGG            TTTATTTATATTTGT  93 35
HC661_RS11285 2301575 .. 2301602 +   -10  -3.62096   CGCAAACGTAAAAAA        GCGAAAGAAC GTATGCTG GTTCTTTCGC         TTTCACGTCATAAAA  80 30
HC661_RS11315 NONE
HC661_RS11320 NONE
HC661_RS11325 NONE
HC661_RS11330 NONE
HC661_RS11335 2307606 .. 2307616 +  -4.6   -2.8805   CACTTTTATCCGATC                 CGGG TCC TCCG                 TGTATACGGCGTAAT  47 69
        proC 2313360 .. 2313377 + -11.3   -5.3671   CGGACCAGTGATAAA             GCATGGG GCTT CCCATGC              TTTTTTCATTCTGTT 100 30
        loaP 2384193 .. 2384218 + -11.9  -2.74094   AGCATTTCAAAAAAA         GCATCAACAGC ATGT GCCGTTGATGC          CCTTTTTATATACAA  81 39
        namA 2385785 .. 2385817 + -10.6  -6.28401   GAGCATGGTGATGAA      GTGACAGCCGGA GTTTTTCGA TCCGGCTGTCTC      TTTTTTTATTTTTTG 100 30
HC661_RS11460 2386673 .. 2386706 + -21.3  -3.46965   GGTAAACTGATAAAA     CAAAAGCCATTGTGC AACG GCACAATGGCTTTTG      TTATCGTGATCTATT 100 31
HC661_RS11475 2389561 .. 2389588 + -15.6   -4.8048   AGAAAACATCAAAAA        CCGCGGCGCCGTT CAT GACGGC-CCGCGG        TTTTTGATATCAGAA 100 40
HC661_RS11490 NONE
        yidC 2393633 .. 2393657 + -17.2  -5.62045   ATCATAATACTGAAA          CCCTGCCGGA ACCTA TCCGGCAGGG          TTTTTTCTTGTATCT 100 34
      prli42 2397043 .. 2397055 +  -2.6  -3.08438   CCTGCTTTTTTATGA                GGGC TTTCC GCTC                TATTGCAATGTCCTC  43 71
HC661_RS11550 2402615 .. 2402641 + -15.3  -5.52384   ATGAAAATAAAAAAA         CTCCTTTTGCC GCCCG GGCAAAAGGAG         TTTTTTTAATAGACG 100 37
HC661_RS11595 2413081 .. 2413099 +    -6  -4.68593   AAAGCTGTAAAAAAA             GCCCTT GCAAAAA AAGGGC             TTTTTCAGTCGTCCG  80 31
HC661_RS11650 2423458 .. 2423477 +  -7.8   -5.0916   CTGAAAAAAAAGTAA            AGGCGCTT AAAA AAGCGCCC             TTTTTGTGTTGAAAA  88 26
HC661_RS11655 NONE
HC661_RS11660 2425113 .. 2425130 + -12.7  -5.63103   AAGTAGACTAAAAAA             CTGCCGG ATGT CCGGCAG              TTTTTTTGATTCACA 100 35
HC661_RS11665 2425462 .. 2425481 + -13.6  -4.45259   GTATTTCCCTCCCTT            TCCGGCTG GCAG CAGCCGGA             TTCTTTTTGCCGTTT 100 46
HC661_RS11670 2425780 .. 2425796 + -13.7  -3.57792   GTAAAGTCAATTTAA              GGGCTGC CAA GCAGCCC              TTTCAGCATAAATAA  95 26
         alr 2427450 .. 2427476 + -10.2  -5.04385   GTGCCGGATGGCCCG         TTCTACACGGCT TGC AGTCGTGTTGAA         TTTTTTGGCGATGTC 100 339
HC661_RS11810 NONE
HC661_RS11815 2451296 .. 2451314 +  -8.9  -5.79526   CTGTTCTGCTTTTTC             CTAGCTC AATGA GAGCTAG             TTTTTTTTGCGGTGT 100 66
HC661_RS11835 2454191 .. 2454216 +  -8.4  -5.75945   ACTAATCATAAAAAA         GAGCT-TCCGT ATAAA ACGGACAGCTC         TTTTTTTTACACCGT 100 36
HC661_RS11855 NONE
HC661_RS11860 2461092 .. 2461111 +  -2.1  -3.73859   TATCCATTCGACACC            TTTCCCG TTTTTT CTGGAAA             TTCTATATTATAATA  49 45
        sinI NONE
        sinR 2461783 .. 2461816 +  -8.2   -4.2349   AGAAAAGCGCAAAAA     GAGGAGTAGTGCCGC CATAT GTG-CACAACTCCTC     TTTTAACTGTCCGAC  77 17
HC661_RS11890 2464505 .. 2464527 + -13.4    -3.889   GAAGAATACCAATAA           GGCCCTCCTG TAT CAGGAGGACC           TTTCGTGTGATTCAC 100 26
HC661_RS11940 2471281 .. 2471320 +  -9.2  -4.98436   ATTGAAGCTGAAAAA  GCTGAATAGCTGAGGGAG ACAT CCCTCCCGGCCATTCAGC   TTTTTATCATCTTAA  90 17
HC661_RS11950 2472318 .. 2472355 + -10.7  -5.16133   CGCAACCGCAAAAAA   CGAAGATTAGCTGATAA ATTT TGATCAGCGGATCTTCG    TTTTTCTCTTATGAT  93 40
HC661_RS11960 2473235 .. 2473256 + -10.9  -5.37593   CCACTGACAGAAAAA           GACAGACCG ATTA TGGTCTGTC            TTTTTTCATTTACAG 100 34
HC661_RS11970 2474232 .. 2474260 + -14.7   -5.5112   TCCGACTGCACATTA        AAAGCCTGTATCC AAT GGATACAGGCTTA        TTTTTTATTGCTGCA 100 25
        nhaC 2479682 .. 2479713 +   -16  -3.29144   AAGCTGACAATACGA      GAAAACCTGCCGTT TTTT ACCGGCAGGTTTTC       TTATGCAAAAAATCC 100 34
HC661_RS12020 NONE
HC661_RS12025 2482005 .. 2482029 + -14.9  -5.52384   ATAAGGAGTATAAAA          CGGACCCGGTC AAT GGCCGGGCCCG          TTTTTTTCATCCGAA 100 94
HC661_RS12075 2492411 .. 2492433 +  -8.4  -5.31275   AAACAGCTGTGTAAC           AAAGACTGCC CCC GGCGGTCTTC           TTTTTTGTCATGAAC  93 27
HC661_RS12080 2492800 .. 2492810 +  -2.6  -4.35604   CCCCGTCTACCGCAA                 TTAA ACG TTAA                 TTTCTTGTCAGTTCG  60 22
        ispG 2494039 .. 2494081 +   -15  -3.65812   AAAAGCAGAACAAGA AGCACAAAAAGCTTGACGGA TAT TCCGCCAAGCTTTTTTTGCG TTGTGTTAAAAAAAC 100 10
HC661_RS12095 2495185 .. 2495204 +   -10  -5.24129   CAAAAGCTGAAAAAA            CCTCCTGT ATAA GCAGGAGG             TTTTTTATCGGCACG 100 31
HC661_RS12110 2496994 .. 2497029 + -14.8  -3.66286   CAATCAATTTTCAGG    GTAAGAAAGGAGGGAC ACCC GCCCCTCCTTTCTTTC     TTATTGAGCTGATAT 100 22
HC661_RS12125 2500169 .. 2500184 +  -6.1  -5.10767   GAATGCAAGATTTGA              GCCGT TTAACT ACGGC               TTTTTATATTGCCTC  83 86
HC661_RS12130 2501172 .. 2501190 + -14.6  -5.60993   AGTAAAAATAAAAAA             CTGAGGCC CGG GGCCTCAG             TTTTTTTATAAGAAG 100 22
HC661_RS12260 2525284 .. 2525303 +  -4.9  -5.80248   GAAACCGTAAAAAAA            CCGATGC GGGAAG GCACCGG             TTTTTTTATCTGTTA 100 31
        rpsT 2539713 .. 2539733 +    -9  -5.64006   TGCATAATACAAAAA            CGATCCCT TTAAC GGGGATCG            TTTTTTTCATTCAGT 100 34
HC661_RS12340 2541139 .. 2541159 +  -6.8  -5.37865   CTTAGCCGCATTCCG            GGCTGCTG TCAAT CGGCAGTC            TTTTTTACTTCTTGC  93 36
HC661_RS12360 2545686 .. 2545708 +  -7.8  -5.00138   AATGCATTTTAAAAA           CCATCGTT CCGTTTA AACGATGG           TTTTTGGTTTGCCTG  86 82
HC661_RS12405 2551299 .. 2551317 +  -7.4  -3.53091   ACTTTCAACAAAAAA             CACCCCTA AAA TAGAGGTG             TTTAAGAGGACGGCT  66 123
HC661_RS12420 2553942 .. 2553973 +  -9.5  -2.71763   CAACGAAAAAATGAA      GCGCGTACCGCC CCCTATTCC GGCGGTACG-GC      TCCTCTCATTCTGAG  70 27
        sigK 2556837 .. 2556856 +  -4.3  -5.34632   GAAAGTGAGCGAAAA            GCCGG-AT CTGAC ATCCCGGC            TTTTTCTATTTTATT  80 33
HC661_RS12465 2560334 .. 2560357 +   -14  -3.75144   AATTAGAAAATGATA          GAAGTCGCAT ACAG ATGCGACTTC           TTGTTCGATGTTGTT  95 196
HC661_RS12475 NONE
HC661_RS12480 2562922 .. 2562932 +  -5.4   -3.1544   TATCTTTAACAAAAG                 GAAG AAG CTTC                 TTACATGTAATATGA  54 499
HC661_RS12490 NONE
HC661_RS12495 2565357 .. 2565371 +  -6.4  -3.31144   CATAACTCTGAGTGT               CCTTGG CAT TCAAGG               TTCTAAAAATAGCAG  60 72
HC661_RS12500 2566311 .. 2566326 +  -4.6  -3.97437   TTTATTAATGTTAAG              GCCCCT ATAG AGGGTC               TTCTCTTATTTTAAT  61 52
HC661_RS12520 2570161 .. 2570179 +   -11  -3.58269   TGTCCAAGTAAAAAA             GGAAGGGG TTT TCCCTTCC             TTTAGCCCTAACTTG  82 202
HC661_RS12540 NONE
HC661_RS12550 2575664 .. 2575688 +  -3.6  -5.30686   AATTGAACACTGCGA         GATGCC-GCAG AAAG TTGCCGGTATC          TTTTTTATAGATATT  76 35
HC661_RS12600 2583169 .. 2583192 + -15.4  -4.11216   AAAAGTGATGAGAAA          CCCTTCTCTG ATGC CAGAGAAGGG           TTTTGAGGATCACAG 100 87
HC661_RS12635 2592417 .. 2592427 +  -3.2  -3.15324   GAAACTTTTGAATCA                 GTGT TAT GCAC                 CTTTTCATACGCCTG  46 257
        fdhF NONE
HC661_RS12680 2603076 .. 2603097 + -13.1  -6.13503   ATAAGAAACGAAAAA           GCCATTGTC AAAA GACAATGGC            TTTTTTTTATTCATC 100 37
HC661_RS12710 2607287 .. 2607306 + -12.2  -5.11937   GTATGACAAAAAAAA            GCAGCTGA TTAA TCAGCTGC             TTTTTTGCGGTTATT 100 35
HC661_RS12780 NONE
HC661_RS12785 2622405 .. 2622433 +   -14  -4.37886   CAAAATAGAAAGGAT       CGCGGGATGAGCA GGCA TGCTCATCCC-CG        TTTTATAAGGAGTGA 100 33
HC661_RS12790 NONE
HC661_RS12795 2623783 .. 2623804 + -11.7  -5.37345   AGACAAACGTAAAAA           GGATACTTC CGGA GAAGTATCC            TTTTTTCTGCTTAAA 100 29
HC661_RS12840 2632128 .. 2632149 +  -6.6  -5.77734   ATTCAAATAAAAAAA           CAGCCTTT CCTGAA GAAGGCTG            TTTTTCTTTTTATTT 100 111
HC661_RS12870 2638543 .. 2638558 + -10.4  -5.72254   CAATCATAAAAAAAA              GCTGCC GAAC GGCAGC               TTTTTTATTGTTTAG 100 32
       spoVB 2649733 .. 2649767 +  -3.7    -4.855   TCTGAATGACCCCGT    CAACGATAAGC-GATG TTTC CATCTGCTTATCCTTA     TTGTTTTTCTTTTTG  73 200
HC661_RS12925 2650784 .. 2650800 + -12.3  -5.77988   AGCGTAATAAAAAAA              GAGCGGA TTC TCCGCTC              TTTTTTTGTATGTAT 100 34
HC661_RS12990 NONE
HC661_RS12995 2663546 .. 2663559 +  -5.2  -5.71712   AAAAGATTAAAAAAA               GCCC CCTGAA GGGC                TTTTTTTATATCGAA 100 31
HC661_RS13100 2682185 .. 2682209 +  -7.1  -4.30559   ATGGATATAAAAAAA          CGAGTCCCGTT ATG AAGAGGACTCG          TTTTCCGCTTTTATT  76 31
HC661_RS13145 2692167 .. 2692189 + -16.4   -4.8622   AACTATACGATAAAA           CCCAAAACGC ACT GCGTTTTGGG           TTTTTCATTACCGGC 100 28
HC661_RS13215 2710446 .. 2710463 +  -9.8  -4.96427   CAGATGATACAAAAA             CCGGCC TCCCAC GGCCGG              TTTCTTTTCTTATTC  93 34
HC661_RS13290 2720682 .. 2720703 + -10.9  -4.66163   GTATAATTGAAAAAA           GGCGGTGACT CCA AGTC-CCGCC           TTTTTGCCTGCCCGT  93 35
HC661_RS13340 2732137 .. 2732161 +  -8.5   -5.1615   ATTCTCAATAAAAAA          GGCCGCCGA TTTTAGT TCGGCAGCC          TTTTTTCAGTATTAA  90 30
HC661_RS13370 2738769 .. 2738790 + -13.1  -5.40464   GGTCATAATAAAAAA           GCTTGCAGA GTGA TCTGCAAGC            TTTTTCTTTATCCTC 100 33
        sspI 2743711 .. 2743730 + -10.7   -6.0427   CGCAATAAGCATGAA            CCGGGTG ATGGGA CACCCGG             TTTTTTTTGTATAAT 100 33
HC661_RS13395 2744894 .. 2744921 +    -5  -3.45817   CATAGTGTGCGGAAT        CGTTTTTCTTTA CAAT TAAATGAAAACG         CTTTTCTTATCAGGG  56 69
        glcD NONE
HC661_RS13405 2747695 .. 2747719 + -10.8  -5.67967   TGTCATAAGATGAAA         GCAGAGAGACC GATC GG-CTCTCTGC          TTTTTTTATGATGCT 100 33
HC661_RS13470 2763106 .. 2763130 + -11.4  -5.42164   AAAAAAGCGAAAAAA          GCAGGCGAGC AATAA GCTCTCCTGC          TTTTTATTCTTTATA 100 11
HC661_RS13515 2769710 .. 2769730 +  -6.8  -5.19879   TTATACGCAAAAAAA            CCCCATTC TGAAT GAACGGGG            TTTTTGTATTTCCGG  89 43
HC661_RS13565 NONE
HC661_RS13570 2781370 .. 2781393 + -16.8  -4.55295   TTTTAACCAGAAAAA          CACCGTTCGG CTTT CCGAACGGTG           TTTGTTTATGCCCAG 100 35
        ytvI 2795962 .. 2795986 +  -5.6  -5.34309   CAGTCCAAATAAAAA          CAGCAGCCCT GTAAG AAGGCTGCCG          TTTTTATTTGATAAT  85 29
HC661_RS13670 NONE
HC661_RS13675 2807283 .. 2807296 +  -3.1  -3.38674   TCATATTTCTTTTGC               GACGT AATT ATGTC                ATTTTTAAAAATTTT  48 19
HC661_RS13680 2807591 .. 2807604 +  -8.1  -2.96822   ATGAACACTAAGAAA               GAGGG TCTC CCCTC                TACTTGTGTTCGTTA  63 30
HC661_RS13690 2808975 .. 2808992 +  -6.9  -3.26717   CATAATGAATGCCAA             GGGACCC GGGT GCGTCCC              TTAACTTCTCTCCAT  60 36
HC661_RS13760 2822543 .. 2822568 + -15.5  -4.80882   TTTATCATAAAAAAA         GAGGACGGGCA TCAC TGCCTGTCCTC          TTTTTCATATACGAT 100 31
        brnQ 2830104 .. 2830138 + -17.3  -5.10767   AAATCGTAACATTCA    GCGCCTGCGGTTTGAT GTAT ATCAG-CCGCAGGCGC     TTTTTATATTCCGTG 100 32
        hisJ 2833268 .. 2833290 +  -9.1  -3.06737   AAATATCGAAAATCA           CCCGCAGGA TGCGT TCCTGCGCG           TCTTCACCATTCATA  66 383
HC661_RS13810 2834136 .. 2834160 + -13.6  -5.39721   GATTAGGATAAAAAA         GGAGCCCGGCC GGCA GGCCGG-CTCC          TTTTTTATGTCGTCG 100 30
        rpsD 2836840 .. 2836873 + -12.5  -5.46706   GAGCATTGGATTAAA     CCCCGGACATGTTGT GATG ACAATGTTTCCGGGG      TTTTTCTTTTGGGCT 100 58
HC661_RS13830 2838438 .. 2838454 + -12.3  -4.88736   TACTTAAATAAAAAA              GCGCAGA GTA TCTGCGC              TTTTTATAAATCCTC 100 30
HC661_RS13850 2842141 .. 2842163 +  -7.7  -5.14563   ACCTCCGTACCTTTT           GGCTCCTCT TTTTC AGAGGGGTC           TTTTTTCATAAGCAA  88 91
HC661_RS13855 2842766 .. 2842790 + -10.1  -5.68039   ATAAGCGAATAAAAA          TGCACAGAC CCGTTCA GTCTGTGCA          TTTTTTTATGGATTT 100 37
HC661_RS13875 2846378 .. 2846399 +  -9.5  -4.12724   GTCGTCACCGGAAAT           CGGTTCATA TAAA TGTGAACCG            TATTTTCTTTGATTT  86 14
HC661_RS13880 NONE
HC661_RS13885 2847523 .. 2847546 + -15.4  -3.90286   TGGTGACAATCAAAA          GCCTCCATTC CGCA GAATGGAGGC           TTTACCTTTATGATG 100 35
HC661_RS13900 NONE
HC661_RS13905 NONE
HC661_RS13910 2853747 .. 2853765 +  -6.7  -5.52384   AAACAAAATAAAAAA             CGACCTT ATGAG GAGGTCG             TTTTTTTGATCACAA  93 30
HC661_RS13975 2865999 .. 2866029 +   -12  -5.03747   TTATTTGAAACAGAA      TAAGCAGG-CCGC CTTTAT GCGGTCCTGCTTA       TTTTTTCACACATTT 100 23
HC661_RS13985 2867602 .. 2867634 + -13.7  -3.19192   CGGACAAGCAAAAAA      TAAAGCCCAAAAC CATCAGC GTTTTGGGCTTTA      TTCGGTTACATCGGC  93 43
HC661_RS14005 2871608 .. 2871627 +  -8.6  -3.04792   TGCCGTACATCCCAA            GCCAGCTGT CCC AC-GCTGGC            TCTTCGACGTAATGA  63 196
        cysK 2876057 .. 2876096 + -19.6  -2.52676   TTATGGTCATTTGAA  TGATAAAAAGGGATGCCG CTTT CGGCGTCCCTTTTTATTA   TCACTTGGCAAGCTC 100 23
HC661_RS14040 2878895 .. 2878918 + -11.1  -4.16943   GGACATTAAGAAAAA          TCCCTTTCC TTTTTC GGAAAGGGA           TTTTCACATATAAAG  90 32
HC661_RS14055 2881326 .. 2881351 +   -12   -5.5353   CGGCCTGACACGCTG         CAAGGCAAAG CAGCGT CTTTGCCTTG          TTTTTTGTTCCTCTA 100 66
HC661_RS14070 2885289 .. 2885315 +  -2.2  -3.06183   CAGGACGTTTCTCAC         GCTCGCTCTAAA TGG TTTAAAGCGCAC         TTACCTGAGCGTCCC  42 15
HC661_RS14075 2887023 .. 2887048 + -11.9  -4.70515   AGCATAATGAACAAC         GAAGCCCGG CATTTCGT CCGGGCTTC          TTTATTTTCGGTATA 100 34
HC661_RS14085 NONE
HC661_RS14090 NONE
HC661_RS14095 NONE
HC661_RS14100 NONE
HC661_RS14105 2892805 .. 2892817 + -10.5  -3.55145   TTGAAGCGCACAAAG                GCCGG CTT CCGGC                TTATCATTGATCATT  79 3
HC661_RS14130 2898213 .. 2898231 + -10.2  -5.39721   GTATAAACAAAAAAA             TCCCGCCG ACA CAGCGGGA             TTTTTTATGTCGTCA 100 35
HC661_RS14205 NONE
HC661_RS14210 2913672 .. 2913700 +  -7.4  -5.23644   CTGCCGGCAAATAAA        GAATCGGCCTGT CATAA GCGGGCCAATTC        TTTTTGTGTTTACTT  90 27
HC661_RS14215 2913976 .. 2914001 +  -9.1  -5.52807   AAACCGTTAAAAAAA         GAGACA-GCGTA AAA TGCGCATGTCTC         TTTTTATTTATTGTT  95 14
HC661_RS14235 2917510 .. 2917529 +  -6.4  -5.51165   GATCCTATGAAAAAA            GAGCCC ATTTCAGC GGGCTC             TTTTTTTACGCTTTT  91 176
        pckA 2924479 .. 2924512 + -10.3  -5.24449   CCTCTCGTGTAATCA     AAAAAGCCAAGGGCG TTTA TGCCCTCGGCTTTTG      TTTTTTCAGTTTGTC 100 29
HC661_RS14275 NONE
HC661_RS14280 2928322 .. 2928344 + -11.3  -3.90511   GAAAAATTTAAAAAA          GACCCGTGCG TAAA CGC-CGGGTC           TTCGTTTTTATGATT  90 30
        ytzI 2930302 .. 2930323 +  -5.9  -4.19953   CGACACGCACTTTTA           CAGTCGGCAT ATT ATGCTG-CTG           TTTTGCCGTTACGTG  69 96
        yidD 2931902 .. 2931918 +  -3.6  -3.98282   CATGGTGGCCGATAA              CGCAGA CTTCA TCGGCG              TTTAATTCGTATACG  58 315
HC661_RS14330 NONE
HC661_RS14335 NONE
HC661_RS14340 2935361 .. 2935379 +  -8.9  -4.98531   ATTTATAAAAGAAAA             GAGCTGT TTTAT ACAGCTC             TTTTTCATTTCCGCG  90 33
HC661_RS14375 2944240 .. 2944255 + -11.8  -4.66163   TCATGCTGATTAAAA              CCCCGG CCTG CCGGGG               TTTTTGAATACAAAT 100 28
HC661_RS14380 2944872 .. 2944890 + -11.8  -5.52384   ACGCATAATAAAAAA             CCTTGCAT AGT ATGCAAGG             TTTTTTTAATGACCC 100 33
        thiT 2952851 .. 2952873 + -14.9   -5.7946   GCGGACAAACTGAAA           CAGCAGGCG GTTTA CGCCTGCTG           TTTTTTTATTCCGGG 100 28
HC661_RS14520 2955580 .. 2955608 + -14.7   -5.7946   AAATCAAACAAAAAA        TCGAAAAGGTCTG AGT CAGACCTTCTCGA        TTTTTTTCTTGGCGC 100 12
HC661_RS14540 2959686 .. 2959725 + -14.6  -3.09562   TCCGATAGAAACGGA  CGA-AAAAAACGCCTGAAT CAA AATCAGGCGTTTTTTGTCG  TGATTTGATTATTTT 100 10
HC661_RS14545 2960414 .. 2960446 +  -9.3  -5.70829   TAATTGCGAAAAACG     GACCGGC--ACAAGC CCATC GCTTGTCAGCCGGTC     TTTTTTTGTGCTGTT 100 38
HC661_RS14550 2961238 .. 2961254 + -11.5  -5.58074   AAGGAATGTAAAAAA              GCCGGCG GGC TGCCGGC              TTTTTTTGATGCTTA 100 30
HC661_RS14565 2964319 .. 2964342 + -13.9  -3.21416   CGGCATTGACAGAAA          GAGCCCCTC ATTGAA GAGGGGCTC           TTGATCATCACGGTC  93 55
HC661_RS14590 2968236 .. 2968259 + -14.6  -5.63517   GATCAAAACTAAAAA          CATCCGCCCG GATT TGGGCGGATG           TTTTTTATTTGGACG 100 29
HC661_RS14620 2978437 .. 2978449 +  -4.8  -4.18401   TATGATTCGCACAAT                CCGT CCAAA ACGG                TTTTCACGTCTGTCG  65 335
HC661_RS14660 NONE
HC661_RS14665 2985739 .. 2985758 +  -7.2  -3.55548   TACTCCCAGCCGCCT            CCGAT-GGT ATA ACCGATCGG            TTTCAGCACCTGTTC  64 338
HC661_RS14685 2988635 .. 2988655 +  -2.6  -3.76815   AGAAATAACTTTCTA            TCTATACA GCATA TGAATAGA            TTTACCGTTTTCAAT  50 33
HC661_RS14690 2989357 .. 2989381 + -14.3  -5.15969   ACAAAATGCATAAAA          GGAGCGCTGAT TGA ATCAGCGCCCC          TTTTTTAAATTCGCG 100 28
HC661_RS14705 2992522 .. 2992574 +  -8.8  -5.15634   AATCCGGAAGTCAGA TAAACAT-AAAAAAAGCACCGAACA TACA TATCCGGTGCTTTTTTTAATGATTA TTTTTTGATAAGGTC  90 23
HC661_RS14725 2995811 .. 2995826 + -11.8  -4.58395   TATTCAATAAAAAAA              CCGGCG GAAC CGCCGG               TTTTTAAGGGGTGCA  95 31
HC661_RS14735 2997350 .. 2997381 + -13.9  -3.05224   GCTTAGCAGCGGAAA      GAACGCCTTTATC AGATGA GATAAGGGCGTTC       GTTTTAGAGAAATAT  93 35
HC661_RS14740 2998748 .. 2998758 +  -5.4  -2.88044   CAGCTGTTCACTAGC                 CAAC CGC GTTG                 ATCTTTTATAGAATA  52 27
HC661_RS14745 2999181 .. 2999199 +  -7.4  -5.71712   TTTAAAAGAACTTGA             CCCAGTCG GCA TGATTGGG             TTTTTTTATGTGGCC 100 26
HC661_RS14755 NONE
HC661_RS14760 3003164 .. 3003175 +  -5.8  -3.63515   GATCTGGAAAAACAC                GCTG CAGG CAGC                 TTATTAAAGATAACG  60 7
HC661_RS14765 3003624 .. 3003651 + -17.2  -3.54771   CTGTCTTAACAAAAA        TGGCTAGCTTAC ACAG GTAAGCTAGCCA         TTATGCTATTATAAA 100 32
        dcuS NONE
HC661_RS14780 3006675 .. 3006698 + -10.3  -5.30189   TTATAATGTCAAAAA          GCGCCGTTC CGCTGT GAACGGTGC           TTTTTTACTGTTATA 100 35
HC661_RS14785 3008203 .. 3008229 + -13.9  -4.09511   AAAAGAGCGGTGAAG         GAAAAGCTGCA TCTCT TGCAGCTTTTC         TTTTGCCAAGCTCTT 100 88
HC661_RS14790 NONE
HC661_RS14795 NONE
        nupQ 3011828 .. 3011854 + -11.7  -4.41353   ATTGTGACACAAAAA        GAGTTCC-GCAC CCCG GTGCCGGAACTC         TTTTCATCTATATAC  95 40
HC661_RS14810 NONE
HC661_RS14815 NONE
HC661_RS14820 NONE
HC661_RS14825 NONE
HC661_RS14830 NONE
HC661_RS14835 NONE
HC661_RS14840 3018091 .. 3018125 + -11.6  -4.92812   TCATATTTGTAAAAA     CAAACAGCCGGA CGATTCAGGGT TCCGGCTGTTTG     TTTATTTTGTTATAA  95 29
HC661_RS14875 3024096 .. 3024112 +  -5.2  -4.75174   TTGGCCCTGATTAAG              GAAATC TTAAT GATTTC              TTTTTGGCTTGAGTG  75 363
HC661_RS14960 3042998 .. 3043027 +  -7.9  -6.14618   TATCAAACTTCGCAG       CATGGGTTCGTGA AATT TCACAAATCCGTG        TTTTTTTATTTTCTG 100 13
         ald 3044257 .. 3044281 + -13.6  -5.73978   TAATAGATATGAAGA          GGACAGCCTG ATCAG CGGGCTGTCC          TTTTTTCTTTCTCAT 100 38
HC661_RS14970 3045049 .. 3045080 + -13.1  -3.81879   GGCTGATGTCCGCAT      AAAAAGCCTGCCG AAATAA CGGCAGGCTTTTC       TTATTACATTTTAGC 100 35
HC661_RS15030 3063151 .. 3063172 + -14.5   -5.4593   TCTTTATGTAAAAAA           CGCTTCAGC GGAT GCTGAAGCG            TTTTTATTCTTTTAC 100 30
HC661_RS15055 3067143 .. 3067169 + -13.1  -5.63517   AAATAATACAAAAAA         GAGTCTGTGTC ATACC GGCACAGACTC         TTTTTTATTTAAACA 100 35
        guaC 3068546 .. 3068566 + -11.3   -5.8187   TCAAAGATAAAAAAA            TGACATTCA ATA TGAATGTCA            TTTTTTTATTAAATA 100 57
HC661_RS15105 3074684 .. 3074714 + -16.3  -4.63486   AACCTCTTTGAAAAA       GGAAAACCCGCTT CTGTT GAGCGGGTTTTCC       TTTTATTAAACAGAT 100 39
HC661_RS15130 3079165 .. 3079186 + -14.5  -2.60211   GCTGATAAGAAAAAA           GCCGCTGAT TGCG ATCAGCGGC            CATTTTTAAGAGCCT  93 36
HC661_RS15140 3079942 .. 3079962 + -12.6  -6.04324   ATTTTAATCATAAAA            CCAGGCTG CATGA CAGCCTGG            TTTTTTATTTTTTAC 100 34
HC661_RS15170 3087214 .. 3087236 + -11.2  -5.65177   CAGAAATACAGAATA           AGGACGGCCG TCA TGGCCGTCCC           TTTTTTTATAGATGT 100 25
HC661_RS15195 3091077 .. 3091109 + -13.5  -5.48623   GCAGGAAAAAGTAAA      CACACAGCCGCCA GGAAAGA TTGCGGCTGTGTG      TTTTTATTTATCTTT 100 27
HC661_RS15230 3098711 .. 3098735 + -13.6  -3.34894   AATGGTTAGAGACAG          GGATGCGGGG TGTTC TCCCGCATCC          TATTTAAGGGGAATT  95 43
HC661_RS15260 3106812 .. 3106835 +  -7.4  -4.70659   CATAAGAAGTGATAA          GGGAGCCCCGA TCA TCAGG-CTCCC          TTTTTCAATATACGG  83 47
        phoB 3109144 .. 3109160 +  -2.2  -4.56597   AGACAGACGATTTTC             GCTC-CG AAAC CGCGGGC              TTTTTCGGCAAGCCG  63 339
HC661_RS15300 3114967 .. 3114989 +  -9.2  -5.12172   CTTCAATCAAAAAAA           CGCTAAGG TTCGTTT CCTTAGCG           TTTTCTTTCTTCATC  90 20
HC661_RS15310 3115718 .. 3115737 + -10.7  -5.42164   TAAACATAAAGAAAA            CCGGAGC CCTTAA GCTCCGG             TTTTTCTTATTTATA 100 38
HC661_RS15330 NONE
HC661_RS15335 3119561 .. 3119578 + -14.1   -4.4261   AATAAAACAAAAAAA             CCCCGCC ATAT GGCGGGG              TTTTACTATTAACCG 100 36
HC661_RS15435 3136710 .. 3136731 + -12.3  -4.62085   TGGAATAACATGCTG           CGGCTGCTT TTTG GAGCAGCCG            TTATTTTTTGAAGAT 100 33
HC661_RS15445 NONE
HC661_RS15450 3138341 .. 3138370 +  -5.2  -6.20267   CAGTAAAACGAAGAA       GGATTTGATGTTT TCGAC AAGCATCAA-TCC       TTTTTTTATTTTTGC 100 35
HC661_RS15455 NONE
HC661_RS15460 3140558 .. 3140576 + -13.8  -5.74122   TTTAACAAAGAAAAA             TCCCGCGG ATG CCGCGGGG             TTTTTTTATATCATC 100 36
HC661_RS15470 NONE
HC661_RS15475 3143624 .. 3143654 +  -6.8  -5.80727   TTTTCAGCAAAAAAA       GCTTCCGGCACC TCTCTTT GATGCCGAAAGC       TTTTTTATTGTTTTT 100 184
HC661_RS15500 3148229 .. 3148243 +  -4.4  -3.99719   TCACTTAAACCCAAA               TTATAA TTA TTATAA               TTTAGTATTGATTTT  61 33
HC661_RS15505 3148784 .. 3148808 + -10.1  -5.66684   AGAATAACGAAAAAA          GCTGAACCT CAGTTGC AGGTTCAGC          TTTTTTTATGCGTTC 100 34
HC661_RS15515 NONE
HC661_RS15520 3152489 .. 3152511 +  -9.2  -5.36441   TATCATACCAAAGTA           GACTGTAGTG TTT CATTGCAGTC           TTTTTTATGTGAAGG  95 25
HC661_RS15530 3153737 .. 3153763 + -12.3  -5.00267   GCAGTTTATTTAGAA         GAACGGCCGCA ATGAC TGCAGCCGTTC         TTTCTTTTTATGCTT 100 28
HC661_RS15545 NONE
HC661_RS15550 NONE
HC661_RS15555 3159166 .. 3159190 +  -8.6  -4.84311   ATGACCCTGTCTTCG         GGAGAGTGTGC TGGC GC-CGCTCTCC          TTTTCTTATGTCACG  90 37
HC661_RS15615 3170020 .. 3170055 +  -8.2  -5.82316   ATTTAACACAAAAAA    GCCC-GGCACAATGGGA ACT TCCCCATATGCCAGGGC    TTTTTTTTACATCAT 100 35
HC661_RS15645 NONE
HC661_RS15650 3176091 .. 3176118 + -12.1  -2.72799   CTGAAGATACACACC        GGCTTGCAGAG TTCCGT CTCTGCAAGTC         TCCTCTGTGTGAAAA  81 37
HC661_RS15655 3176574 .. 3176595 +  -8.7  -5.88471   GGCGCAATAAAAAAA           CGCAG-GCCG GAA TGGCTCTGCG           TTTTTTTTCATCATA 100 31
HC661_RS15675 3180669 .. 3180685 + -13.7  -5.10208   CAAAGTAACCCCGAA              GCCGCTG TCA CAGCGGC              TTTTTATTGCGCTTA 100 33
HC661_RS15680 3181745 .. 3181768 +   -14  -4.91109   CCGCAAACAAAAAAA          GACATCTCAC AGAC GTGAGATGTC           TTTTTGTCATACCGA 100 48
HC661_RS15695 NONE
HC661_RS15700 3186311 .. 3186331 + -11.9    -4.946   TAAGCAATAAAAAAA            TCCCTCCGT TAT ATGGAGGGA            TTTTTCATGTTTCAT 100 31
        modA NONE
        modB 3188849 .. 3188876 +  -8.4  -4.99134   CCGCTTGACCGATCT        GCCTTCC-GCGCA CCT TTCGCCGGGAGGC        TTTTTGATTTAAAAT  90 33
HC661_RS15720 NONE
HC661_RS15725 3190736 .. 3190767 +  -9.5   -5.9873   ATTCTCATGTCAAAA      GAATGAACAGCTG CACTAA CGGCCGTTCATTC       TTTTTTTTATAATAA 100 70
HC661_RS15730 NONE
HC661_RS15735 NONE
HC661_RS15740 3194019 .. 3194036 +  -8.4   -5.4505   TTATGTAAAGAAAAA             CAGCCC CGTAAA GGGCTG              TTTTTTCTTAGAACA  95 33
HC661_RS15750 3195590 .. 3195611 +  -9.4  -5.85737   CCGTAATCTAAAAAA           GTCCGGCG AACAGA TGCCGGAC            TTTTTTTATTCATCT 100 35
HC661_RS15780 3205834 .. 3205857 + -13.2  -4.67048   CAAATAATAGAAAAA          GAGCC-GCTCC CAT GGAGCAGGCTC          TTTATTTTGCCGTGC 100 34
HC661_RS15815 3213606 .. 3213629 + -13.8  -5.44119   CTTTAATATGAAAAA          CCTCCCAGCC GTAC GGCGGGGAGG           TTTTTTTAAGATCAG 100 35
HC661_RS15830 NONE
HC661_RS15835 NONE
HC661_RS15840 3218097 .. 3218137 + -10.8  -4.77165   CTTTTAAATAGTAAA GAGCCGATTTAC-TC-TTAA TGG TTAACGGGGTAAATCGGCTC TTTTCTTATCCAAAA  93 114
HC661_RS15890 3226315 .. 3226331 + -10.8  -4.92314   TCCGCATTAAAAAAA              CCCCCG CTTTA CGGGGG              TTTTTGTACGTTCAT  93 31
HC661_RS15985 3240684 .. 3240702 +  -5.9  -5.52384   GCCATAAGAAAAAAA             CGCCCTG ACCCG CAAGGCG             TTTTTTTCATGCCGC  89 34
HC661_RS16010 3244946 .. 3244973 +  -9.8  -5.08824   CGAAAATAGAAAAAA        GCAGCACCCG AAGATAAC CGGGCGCTGC         TTTTTTAAGTCAGGA  93 9
HC661_RS16020 3246773 .. 3246798 +   -14   -5.8187   TTTTAAAAACGGAAA         CCCCCGCCGCC TGATT GGCG-CGGGGG         TTTTTTTATTGAATG 100 35
HC661_RS16030 3249194 .. 3249217 + -13.1  -2.72211   GATTTATGATAAAAA          GGGCGCCGG CTGACA TCGGCGCCC           CTTCGTTTACCATTC  90 32
HC661_RS16120 3270231 .. 3270264 +  -6.7  -2.78712   GCGGATCGGCGAATA     AAAATGGGCAGATAC AATT GTATCTGCCCATCAG      TCATTAAATTGAAAA  57 25
HC661_RS16140 3274699 .. 3274718 + -12.2  -6.08342   CGTTCATTAAAAAAA            CTCTTGCC GCGG GGCAAGAG             TTTTTTTATTTATTG 100 31
HC661_RS16150 3278366 .. 3278383 +    -7  -4.75776   GCGCTAAGCAAAAAA             GACCAC CATAAA GTGGTC              TTTTTAAGTTGACTT  81 34
        gntK NONE
HC661_RS16180 3285339 .. 3285365 + -13.8  -5.64274   GCGTTTATATAAAAA         CAAACCCCGG CCGTAAA CCGGGGTTTG         TTTTTTTATCGGTCA 100 29
HC661_RS16210 3292279 .. 3292304 +   -14  -3.63805   CCGTAACACGGAGAA         CCTCCCCGGG GTTTGG CTCGGGGAGG          TTTCAGCTGTACCGT  95 35
        yvfG 3294184 .. 3294196 + -10.5   -5.4505   ACCGCGCAATCGGCA                GCGGG TTT CCCGC                TTTTTTATTCAAAAC 100 296
HC661_RS16300 3310319 .. 3310339 +  -3.4  -2.67515   GAAGTCAGATCATTT           TTAG-AACG GAAG CGTTACTAA            TGATATGCTGATGAA  43 5
HC661_RS16305 3311873 .. 3311898 + -15.5  -4.25388   TTCAAGCATAAAAAA         CGCCAAGGGAG CCGG TTCCCTTGGCG          TTTCGTTTTCATCTC 100 30
HC661_RS16320 3313813 .. 3313830 +  -9.8  -5.57729   AAAGGATACAAAAAA             CCCGGC CAAGCT GCCGGG              TTTTTTCTCTTATTT 100 40
HC661_RS16345 NONE
HC661_RS16350 3317580 .. 3317604 + -14.4  -4.83269   GATAAAATAAAAAAA          CCTCGCAGAT TTATC ATCTGCGAGG          TTTTTCCTATCGTCT 100 36
HC661_RS16370 3322028 .. 3322042 +  -2.1  -3.64716   TCAGCCGTACGTAGC              GA-CGC CATT GCGGTC               TATTTTGAGCGCTCC  49 50
        clpP 3322859 .. 3322885 + -12.4  -5.75599   GTAATGCCCAAAAAA         CCTGCAAGAG CTGATGT CTCTTGCAGG         TTTTTTTATGCTTTA 100 37
HC661_RS16385 3325155 .. 3325167 +  -3.3  -3.65036   TTTTCAAGGGCCCAT                CAAGC AGT GCTCG                TTATCCTTTCATTCG  52 126
HC661_RS16400 3327736 .. 3327765 + -12.9  -3.01857   AACCAAATAAAAACA       CGGCCTGTCCG CTTTTTCA TGGACAGGCCG        TATCTGAATTTTATC  91 31
HC661_RS16415 NONE
HC661_RS16420 3331325 .. 3331345 + -13.9  -4.89063   CAATGAGATGAAAAA            CCCCGGCCG TTT CAGCCGGGG            TTTATTTTTCGCTAG 100 35
HC661_RS16425 3331924 .. 3331943 + -11.4  -6.06723   AACACATACAAAAAA            CGGCTTCC CTGC GGAGGCCG             TTTTTTTTTGCAGAG 100 40
HC661_RS16535 3352984 .. 3353007 +  -9.5  -4.34711   AAGTCATAAAAAAAA          CCCCGCTGA CGTTAA TCTGCGGGG           TTTTCCATTCGTTTT  90 32
        nagA NONE
        nagB NONE
HC661_RS16570 3358785 .. 3358812 + -14.3  -5.58454   CAGGGTGAAATGAAA        CATCTCCAACC GTTACG GGTTGGAGATG         TTTTTTTGATCTGCC 100 28
HC661_RS16605 3366071 .. 3366098 + -14.3  -5.17744   AAGCCTGTAACACAA        CAGCCCAAAAC CGGTGA GTTTTGGGCTG         TTTTTATTGATCTAT 100 9
HC661_RS16625 3374212 .. 3374243 + -10.8  -3.34715   TTCCCTCTTTATTGA      CGGGCAGGGCGGGT GTAT ACTTGTCCTGCCAG       TATTTACGCGAGGTG  80 43
HC661_RS16630 NONE
HC661_RS16635 3376201 .. 3376244 +  -6.9  -4.63179   GCCATTCGGCGTAAA C-GAAAAAGGTTCC-GTAAGC ATCT GCTTTCCGGAACCTTTTCCAG TTTTCCTTCTTATTT  79 27
HC661_RS16695 3417353 .. 3417373 + -11.2  -4.84918   AAACCATTAAAAAAA            GCCAGTCT ATATC AGACTGGC            TTTTGTATTTATACA  95 43
HC661_RS16830 NONE
HC661_RS16835 3441888 .. 3441911 + -15.4  -5.74122   GCTATTAAGAGTAAA          CCCGATCCTT TGAG AAGGATCGGG           TTTTTTTATATAATA 100 33
HC661_RS16900 3457397 .. 3457413 + -10.9   -5.9218   GAAATAATAAAAAAA              CTCTGCA TGA TGCAGAG              TTTTTTTATTCTGTA 100 34
        galU 3459663 .. 3459709 + -13.3  -4.32046   GAAAAAGAAGAAGCT GA-CGAATAGAAAAAGCTGCCG AATC CGGCAGCTTTTTTTATGTGATC TTTACTTTTTAGACG 100 17
HC661_RS16940 NONE
HC661_RS16945 3468937 .. 3468960 + -12.5  -5.75599   TTTGCATGAAGAAAA          GGGCTGAAG CATACA CTTCAGCCC           TTTTTTTATACTTTC 100 59
HC661_RS16965 NONE
HC661_RS16970 3476973 .. 3476987 +  -5.6  -4.21194   TGAGTACGTTTCAAT               GACGCG CCA CGGGTC               TTTTAAGTGCTCAAG  66 389
HC661_RS16985 3480795 .. 3480818 + -16.8   -5.0916   ACGCGTAAGACGTCA          CGGCGGGATT AGCA AATCCCGCCG           TTTTTCTGTTGAAAA 100 33
HC661_RS16990 3481809 .. 3481830 +  -9.4  -4.24002   CAATAAAAGGAAAAA           GCCAGGTC TTTCAC GGCCTGGC            TTTTCACGTTTCCCA  89 35
HC661_RS16995 3482639 .. 3482663 + -17.3  -5.40072   ACGGTAAAAGAAAAA          GACGTCAGAGA CAC TCTCTGACGTC          TTTTTTTACGGAAGC 100 34
HC661_RS17025 NONE
HC661_RS17030 NONE
HC661_RS17035 3491443 .. 3491456 +  -6.7   -5.7946   CATCGTGAACTAAAA               GAGAC CGCG GTCTC                TTTTTTTGTTGCCAA 100 28
HC661_RS17040 NONE
        rbsK NONE
        rbsD NONE
HC661_RS17055 NONE
        rbsC NONE
        rbsB NONE
HC661_RS17070 3497794 .. 3497822 + -10.4  -5.80003   GACATAATAGCAAAA        CGGATTTCGC AAATTCAGC GCGAAATCCG        TTTTTTCTTTCTTGG 100 34
HC661_RS17090 3502147 .. 3502168 +  -2.2  -5.77632   AAAATGCATAAAAAA           GAGGGCCGC CGAAA GCAGC-CTC           TTTTTTTGTGCTTTT  84 30
HC661_RS17095 3503684 .. 3503707 +  -4.6  -4.64846   CCCTGATGAAAAAAA          CTGCCTGCTGT ATA AGAG-AGGCAG          TTTTATCATTTATGG  69 41
HC661_RS17115 3507225 .. 3507246 +  -7.2   -4.7497   CACCATTCGTAAATA           GGCTGCCG GCTAAA CGGAAGCC            TTTTTCCTCAATCAG  83 41
HC661_RS17120 3508024 .. 3508043 + -12.2  -5.19916   GAAACTAGTCAAAAA            GACCCCTT TCGA AAGGGGTC             TTTTTTGAGTCTTTT 100 63
HC661_RS17135 NONE
        chrB 3511321 .. 3511332 +    -3  -4.31166   AAAGGAATGTCGGCC                TCAT GATC ATGA                 TTTATGTATTTATGG  57 20
        chrA 3511866 .. 3511881 +    -9  -5.30616   CATTTATAAAGAAAA              GCACCT GGAC AGGTGC               TTTTTGTTTCAGTCC  93 32
HC661_RS17240 NONE
HC661_RS17245 3529879 .. 3529904 + -12.6  -4.59027   CATTAAACGCAAAAA         GGCCGGCTCT CTCAGA AGAGCCGGTC          TTTTATGTCGTCCTT 100 35
HC661_RS17270 3533214 .. 3533236 +  -4.7    -5.626   TATAATCATGAAAAA           GGCCGGACG TTAAT CATCCAGCC           TTTTTTTGTGCCCTA  89 36
HC661_RS17285 3535558 .. 3535579 +  -4.3  -3.68569   GCTCCATGCCGATTG           CCTGCCGGT TTGC GCCGGTAAG            TTCTTCAATCGCTGA  55 198
HC661_RS17310 NONE
HC661_RS17315 3540646 .. 3540664 + -17.4   -5.7946   CTGATATGACAAAAA             GCCGGGGG CAG CCCCCGGC             TTTTTTTATTCGGCC 100 37
HC661_RS17335 NONE
HC661_RS17340 3546057 .. 3546083 + -14.5  -5.10029   TATAAACAGGCAGAA        CGCCCGGGGACA GAAA TGTCC-CGGGCG         TTTTTTCAGCTTCAT 100 36
HC661_RS17350 3548000 .. 3548023 + -13.2  -5.14985   ATATATAAAAAAAAG          CCGGC-GTCTG TCA CAGACTGCCGG          TTTTTGTATGTTTGG 100 33
HC661_RS17365 NONE
HC661_RS17370 3550476 .. 3550496 +  -7.6  -5.14563   TTTGAATGACAAAAA            GAGCTGAT CGCGC GTCAGCTC            TTTTTTAATAAAGCA  86 32
         cls 3552608 .. 3552629 +  -8.7  -4.46212   TCGCCGATTTTGTAA           TTCCCGGGG TGTT TCTCGGGAA            TTTTCTGATACAAAA  85 26
HC661_RS17385 3553139 .. 3553159 +    -9  -5.64873   TATTAAAAAGGAAAA           TCCC-GGCG CATC CGCCCGGGA            TTTTTTCTTATTCCG 100 35
        xynA 3554568 .. 3554591 + -11.2  -2.62668   ATAGCGGCATGAACC          CATCTCTTTT TAAC AAAAGAGATG           ATTCATTACATCATA  79 347
HC661_RS17475 3568511 .. 3568540 + -13.7  -5.40004   GTTAATATAGAAAAA       GAATCCTTCTCAG ACAG CCGAGAAGGATTC        TTTTTTAGTTTCCTG 100 36
HC661_RS17570 3583564 .. 3583589 + -16.9  -5.20216   TCCATTGTAACAAAA         GCCCGCCGTGTG CGT CAC-CGGCGGGC         TTTTTTCATGATGTG 100 330
HC661_RS17590 NONE
        racA 3586704 .. 3586722 + -14.6  -4.49389   ATTCTAATCAAAAAA             GCTCCCTG AAA CAGGGAGC             TTTTCATTATGCAGT 100 34
HC661_RS17650 3597897 .. 3597924 + -10.6  -5.87996   CTGATGCAGAAAAAA        GACTTGCCGCTT TTAA AGGAGGCAAGTC         TTTTTTTATTACTTC 100 37
         cls NONE
        uvsE NONE
HC661_RS17680 3605321 .. 3605359 +    -8  -5.62288   ACTACATAAAAAAAA   GGATAGACAGGAGGCTGC CCG GCCCCCGCTCGTCTATCC   TTTTTCTTTTATTAA 100 47
HC661_RS17725 3617455 .. 3617475 +  -5.4  -5.47821   TCACAAGCTGAAAAA            CAAGGACA CCGGC TGCCCTTG            TTTTTTTCAGTCAAT  89 30
HC661_RS17750 3622818 .. 3622830 +  -6.3  -3.86897   CTGGGAAATTCAAAT                GTATC TAT GATAC                TTTCTACCAACTGCC  66 462
HC661_RS17765 NONE
HC661_RS17770 3626654 .. 3626679 +    -9  -5.36441   ATAATGATTACTTTT         AGGCTTGCAG GTTAAA CTGCAAGCCG          TTTTTTATATAAACA  95 41
HC661_RS17775 NONE
HC661_RS17780 3627391 .. 3627422 + -18.2   -3.9712   ATGTTTCAGTACAAA      GAAAGCCGGATCAT ACAT ATGGTCCGGCTTTC       TTTGTACTGAAATAA 100 160
HC661_RS17785 NONE
HC661_RS17790 NONE
HC661_RS17795 3628958 .. 3628971 +  -8.1  -5.41941   CATATATAAATAAAC               CCCCT CAAT AGGGG                TTTTTCTTTCATTTC  93 41
HC661_RS17815 3633409 .. 3633431 + -14.1  -3.74519   GGCAAAAAAGACTGA           GCCCGGTGC ATTGC GCGCCGGGC           TTTAATCCGCGTCTT 100 26
HC661_RS17835 3635505 .. 3635529 +  -9.3  -4.12947   TAATCCTTGATAACG         GCCGGCGCTG CTATGT CAG-GCCGGC          TTATTTCATTACTTT  83 38
HC661_RS17845 3637721 .. 3637746 +    -9  -5.14563   AGACAATAAACAAAA         CCAGGCC-CGC TTTAT GTGCGGCCTGG         TTTTTTCATCAAAAA  90 32
HC661_RS17865 3641005 .. 3641025 +  -3.3  -3.57144   CCCCTTTCCTTGTCA            TGGAAAAAG GGG TTTTTGCCA            TTTGGCAATGACGCG  50 49
HC661_RS17870 NONE
HC661_RS17875 3642128 .. 3642148 +  -4.6  -2.68003   GCTCTCATTTTAATC            GCTGCCGG CCTGA TCGGAAGC            ATGTTCTTCGGTTTT  47 45
HC661_RS17880 3643169 .. 3643200 +  -2.4  -2.75238   TCATAAAAATAACCC      GAAAAAAAGGCACA CTTT TATCTCTTTTTTTC       CTGTTTCTCATCGTT  41 68
HC661_RS17915 3649871 .. 3649892 + -10.1  -4.14392   CTTTCTATAAAAAAA           GCCGGTCCT CGTA AAGACCGGC            TTTTGCGGATTACAG  89 31
HC661_RS17925 3651902 .. 3651918 + -10.8  -5.72622   CACGTGTAATAACCA              CCCGCC TGTCC GGCGGG              TTTTTTCTTTGTCAG 100 32
HC661_RS17930 3652801 .. 3652821 + -15.5  -4.35483   AGCATCTAATAAAAA            CATCCCGCT CTC AGCGGGATG            TTTCTTGTAATGAAG 100 32
HC661_RS17970 3661535 .. 3661557 + -11.9  -5.88565   GAAAAACAAAGTAAA           GCCCGCCGC TTTTT GCGGAGGGC           TTTTTTTCTTATCCG 100 27
        gerQ 3679658 .. 3679686 +  -5.4  -6.02919   GAGATAAATCAGAAA       GCCAATCGCTC ACTTGACA GAG-GATTGGC        TTTTTTTCTTTATAA 100 34
HC661_RS18085 3684645 .. 3684667 + -10.6  -4.32035   AAAATAAAATAAATA           TCCCCCTC ATTACCC GAGGGGGA           TTATTTCATTTTTTT  91 34
HC661_RS18115 3692159 .. 3692180 + -12.3  -4.59944   TGAATAACCGAACAA           CCCTGCTGG AGCA TCAGCAGGG            TTTCTTTCTGATCAT 100 34
        ywcE 3696616 .. 3696647 + -11.7  -5.15167   CCAATAAAGGCACAA      AAAACCCTCTTCG CCTGAA CGAAGAGGGTTTC       TTTTTATTCCTGATG 100 34
HC661_RS18165 3701347 .. 3701370 + -12.4   -5.0538   AGAGGATAAAAAAAA          GCCTCGTCCC TTAT GGGATGGGGC           TTTTTTCCGGTAGAG 100 32
        sinI 3705697 .. 3705723 +    -5  -3.17273   CAATGAAAAACACCA         TCCGCCAGCGGT AAG ATTACAGGCGGA         TCCTTTTACTATATG  53 12
HC661_RS18195 3706604 .. 3706625 +  -2.3  -3.61175   GGCCGAGAGGAGCAT           GTAATGGAT TCAC ATTCATTTC            TGTTTGTCGTCTGTG  47 22
HC661_RS18200 3707269 .. 3707291 + -14.9  -5.09426   ACACTATATGGCAAA           GCCCTCTCG CTGAT CGAGAGGGC           TTTTTTCGGGTTAAC 100 13
HC661_RS18235 NONE
HC661_RS18240 3713218 .. 3713239 +    -8  -5.95539   GTTTATGTCATAAAA           GACTGCTC CTTACA GAGCGGTC            TTTTTTTATTTGCCA 100 28
HC661_RS18245 3713545 .. 3713564 +  -7.1  -6.01187   ATTGAATAGAAAAGA            GCCGGAGC TTCAC GC-CCGGC            TTTTTTTCTTTAATT 100 32
HC661_RS18250 NONE
HC661_RS18255 3715544 .. 3715573 +  -2.3  -4.33153   ACGCTCATTTGTTTC       TTTAAAGGC GGTCTCTATAAA GCCTTTAAA        TTTCTTCATATTGAA  61 225
HC661_RS18265 3717087 .. 3717124 + -16.5  -4.20783   ATCGAATTTTTCCAG   CGTTAAAAAAACGGGCG AAAG CGCCCGTTTTTTTTATG    TTTCTTCAGTGACGT 100 20
HC661_RS18275 3720370 .. 3720401 +  -9.5  -3.73224   GAAATAGAAAAAAAA      CGCTTATG-AGCCG GATAA CGGCTTCACAAGCG      TTTCATCACACCTGC  79 34
HC661_RS18295 NONE
        dltA NONE
        dltB NONE
        dltC NONE
        dltD 3728000 .. 3728022 +  -9.8  -5.07941   CGTAAAAACGAACAC           GCAGGGGGCA TTC TCTCCCCTGC           TTTTTATGTGGTTTT  93 60
HC661_RS18320 3729250 .. 3729267 +  -8.4  -5.56568   AAAATAAGCAAAAAA             CCCGGA ATCGAA TCCGGG              TTTTTTTACTGCTCT 100 34
HC661_RS18355 3737061 .. 3737078 +  -7.7  -2.75343   CCCGGATTCTGGTGA             CGATGCT GGCC GGCATCG              GTTTAGGAGTGTCGG  62 228
HC661_RS18365 3738793 .. 3738821 + -13.2   -5.5208   CAAAAATAAACACGA        GCCGGTTTTGCA AAAAG TGCAAGGCCGGC        TTTTTTATATTGTCG 100 32
HC661_RS18370 NONE
        arsB 3740561 .. 3740584 +  -8.3  -5.71712   GCTTGAGATGAAAAA          CCTTTTAAG TTGAAT CTTAAAAGG           TTTTTTTGTGTCAAA 100 35
HC661_RS18380 NONE
HC661_RS18385 NONE
        celB NONE
HC661_RS18395 NONE
HC661_RS18400 NONE
        manA NONE
HC661_RS18410 3747092 .. 3747103 +  -3.6  -2.64759   CGGTTTTAAATTACG                GCTC TGCT GGGC                 ATATTGTTACCGTTC  43 58
HC661_RS18415 3748760 .. 3748777 +    -7  -6.09133   TATTAAATAAAAAAA             CAGGAC AATCGC GTCCTG              TTTTTTTTTGAGCTA 100 35
HC661_RS18425 3751436 .. 3751458 +  -9.1  -5.12172   GGTAAAACAACAAGA           GGCGCCTTC TCTAT GAAGACGCC           TTTTCTTTATTCATA  90 10
HC661_RS18455 3760081 .. 3760100 +   -15  -3.36839   TTAAACTGAAAAAAA            GCCTCCGC ATAT GCGGAGGC             TCTGTTATTTCATCA 100 37
HC661_RS18480 3765229 .. 3765253 +   -13  -4.86385   ATGACCGTAATAAAA          GAGACCTTCA CCATT TGAAGGTCTC          TTTCTTTTTACACCT 100 40
        pepT 3767723 .. 3767741 +  -8.9  -5.95539   AGAGCGCGCTTAAAA             CCAAAGC CCCCT GCTTTGG             TTTTTTTCTTTCACA 100 28
HC661_RS18495 3768472 .. 3768493 +  -7.2  -5.93809   TATCATAAAAACGAC           AGCTGCCG CAAAAT CGGCAGCC            TTTTTTTTATGCACC 100 33
HC661_RS18500 3769235 .. 3769257 + -12.1  -5.88197   ATTTGCGGACGCAAG           CTCTTCCCT ATCCG AGGGAAGAG           TTTTTTTATATTTCA 100 216
HC661_RS18505 3770437 .. 3770455 + -10.3   -4.4267   TGGAAATAAAAAAAA             GACACGC GATTA GCGTGTC             TTTTCCGTTTTACAG  90 32
HC661_RS18515 3773149 .. 3773179 + -12.6  -6.13503   GGTAAAAGAAAAAAA       GCGATACCGCTCCG TTT TGGAGTGATATCGC       TTTTTTTTATTGATA 100 36
        citN 3778100 .. 3778146 +    -5  -5.71712   GGGATTATTTCGTTT TAAT-TA-A-AAAAGGATTTCCG CCAG CGGAAATCCTTTTCTGTACATTA TTTTTTTGTATAGCG 100 23
HC661_RS18550 3781366 .. 3781382 +  -9.4   -6.5058   GACGGCGTAAAAAAA              GCCTGC GCGCG GCAGGC              TTTTTTTTTATTTCT 100 31
        hutP 3806063 .. 3806101 +  -9.8  -4.96848   GATTTCAGATGATAG  GGGGCTATG-CGTGAAA TATCAT TTTCATGGCATAGCTCC   TTTTTGTATGGGCGC  93 52
        hutH NONE
        hutU NONE
HC661_RS18665 3810591 .. 3810605 +  -3.4  -3.09015   AGACGGTTGTCTCAA               GGGAGG GAG CCGCTC               TTGGATAAGTATCCG  45 3
HC661_RS18670 3811577 .. 3811593 +  -4.3  -2.57132   AATCCGGCACGCGTG              CTCTCGG CTG CCGGAAG              GTTCTCACGCCACGC  47 46
HC661_RS18675 3813051 .. 3813075 + -10.8  -4.51763   CATGCCATAAAAAAA          GGCACATACT GATGA GGTATGTGCC          TTTCTTCTCTTATTC  91 31
HC661_RS18715 3819780 .. 3819824 +  -8.7  -2.91264   TTCTGAGAAAAAGGG CCGGAATACAAAGCTCG ACAGGCCATCC CGAGCCTTGTATTCCGC TCTGTACATAACAGG  66 35
HC661_RS18720 3820304 .. 3820340 + -13.3   -5.1104   AATAGGCCGGTCATG   CAAATGACAAAGCGCG AGATAC CG-GCTTTGTCATTTG    TTTTTATCTCTGTTT 100 36
HC661_RS18730 3821835 .. 3821858 + -12.5  -4.88228   AAAAAATAAAAAAAG          CGGCACAGT CATGAC ACTGTGCCG           TTTTTCATGTTCACT 100 32
HC661_RS18770 NONE
HC661_RS18775 NONE
HC661_RS18780 3831885 .. 3831906 + -10.9  -4.25104   AACGGAAAGACGAAA           GCACTCACG ATGT TGTGAGTGC            TTTTCATCAGCCGAC  90 310
HC661_RS18835 3844410 .. 3844436 +  -2.9  -2.86743   TATAGTTAATAGAGA        AC-GCTGCCGTA TTTT TCCGGCAGCCGC         TATGATATCCAATTT  42 44
HC661_RS18840 3845410 .. 3845430 +  -9.7  -6.15717   TTCCTAAGAAAAAAA            CACGCCTTT TAA AGGGGCGTG            TTTTTTTTATGTTTA 100 34
HC661_RS18845 3846918 .. 3846942 + -15.8  -4.63527   ACTGTAATAAAAAAA          GGAATCGCCC CCGCT GGGCGATTCC          TTTTTGGCGTCATAC 100 34
HC661_RS18860 3850252 .. 3850274 +  -9.1  -4.58773   GGCTGAACAAGCTGA           GGGCGGGTT ACTTA AACCAGCCC           TTTTCCTTTGATCGG  88 75
HC661_RS18885 3856028 .. 3856047 + -12.2  -5.80727   CTCTAAATAAAAAAA            GAATCCGC GCAC GCGGATTC             TTTTTTATTATTTTT 100 31
HC661_RS18900 NONE
HC661_RS18905 NONE
HC661_RS18910 3860062 .. 3860084 +  -9.8  -5.60993   AAATAACGACCTCAA           GTCCGGGC CTTTTGA GCCCGGGC           TTTTTTTATGACGGC 100 35
        ahpC 3861639 .. 3861650 +  -2.2  -2.57136   GTAGGTAAAATCTAA                GGAG TGCA TTCC                 ATTGGTACTTGATGC  39 26
        ahpF 3863189 .. 3863208 + -13.6  -5.13473   GGAATTAATGTGAAA            GCCGCCAT ATGA ATGGCGGC             TTTTTTAAATATACT 100 33
HC661_RS18940 3868404 .. 3868429 +  -8.3  -5.49809   GAAGTGAAGAATATG         GAGTTCAGGGA TGAT TCTCTGGGCTC          TTTTTTTACGGTTTC  95 34
HC661_RS18975 3875681 .. 3875694 +  -9.5   -4.7261   AACCATGAAGAAAAA               GGGGC CCGC GCCCC                TTTCTTTTACTAACT  93 39
HC661_RS18980 3875873 .. 3875897 +   -13  -3.12351   ATTAAGATGGTGAAA          GAGAAGCAAC AGTAG GTTGCTTCTC          TTAGCTGTGGAAACC  91 11
HC661_RS19025 3886050 .. 3886070 +  -9.7  -4.25848   AGATGAATAACAAAA            GAGGCCC ATCGTGC GGGCCTC            TTTTCATGACAGCTT  89 31
HC661_RS19065 3894510 .. 3894529 +  -9.3  -4.19648   ATCCATACAAAAAAA            GGCTGAG TTGCTC CTCAGCC             TTTCGTTTATATCTG  85 41
HC661_RS19170 3914396 .. 3914431 +   -20  -3.05463   GAAGAACGATCCTTT    TAAGAAAAGCCTTCGC CCGA GCGAGGGCTTTTCTTA     TTCGATGAAACGGAT 100 23
HC661_RS19180 NONE
HC661_RS19185 3915246 .. 3915272 +  -4.4  -4.77698   AAAATAGTTCGGAAA         GAGGCTGG ATAGTTAAACG CCGGCCTC         TTTATTTTGCTCTTG  72 34
HC661_RS19245 3926050 .. 3926076 + -10.2  -4.31587   ATGAAATAAAAAAAA         GCAGCAAGGAAT TTA ATCCTTTGCTGC         TTCTTATTTTTGAGC  90 32
HC661_RS19255 3927594 .. 3927616 +   -12  -5.52023   GCAGAATAACCAACA           CACCCCGG AAACCAG CCGGGGTG           TTTTTTATTGCTCAT 100 32
HC661_RS19260 3928688 .. 3928706 +  -8.9  -5.14563   ATCAAGCAAAAATAA             CCTCTCT TTTTT AGAGAGG             TTTTTTCCTAGGCCC  90 26
HC661_RS19275 3932824 .. 3932851 + -12.9  -4.13014   GCATAGCAAACGAAA        CAGCCAAATCA CTCATA TGATTTGGCTG         TTTTACGGATATCAC 100 35
HC661_RS19295 3936480 .. 3936504 + -15.8    -3.727   AACAGAAATAAAAAA          GAGGGCTTCC TTTCC GGAAGCCCTC          TTTCCGTCTGCTACG 100 75
HC661_RS19325 3940254 .. 3940268 +  -5.7  -5.80364   AATTATTTACCGAAA               GCCTT GTATA AAGGC               TTTTTTTCTTAGCCT 100 75
HC661_RS19330 3941444 .. 3941460 +  -9.5  -4.24948   TCGAAGTATCAAAAA              GCGATTA ATA TAATCGC              TTTTACATATGATCA  89 47
HC661_RS19345 3944078 .. 3944094 + -10.8  -5.25656   ATTAACTTAAGAAAA              GCCGCC CTGTT GGCGGC              TTTTTTACTGGTTTT 100 165
HC661_RS19355 NONE
HC661_RS19360 3947466 .. 3947478 +  -2.7  -4.17048   TTTTAAGGATATTTT                GTTTT ACA AGAAC                TTCTTTTGGAAAAAC  59 462
HC661_RS19370 3948439 .. 3948455 +  -6.6  -5.26875   TCTAAAAACAAAAAG              GACAAC ATATC GTTGTC              TTTTTTCATTACAAA  89 36
HC661_RS19385 NONE
HC661_RS19390 3952290 .. 3952315 + -11.2  -5.42198   ACACCTTACAAATCA         GCAGCAGAGCC TAGGC GGC-CTGCTGC         TTTTCTTTTTTCACA 100 12
HC661_RS19400 3955033 .. 3955043 +    -4  -5.39755   AATGAAAGAAAATAC                 GATT TGA AATC                 TTTTTTCTCATTATG  83 317
HC661_RS19465 3964775 .. 3964802 +  -5.6  -5.36441   TTTTATTTCTGTCAT        GAACTTAGAGAA TAAT TGCTCTGGGTTC         TTTTTTCTATCCCGC  89 24
        yyaC 3965570 .. 3965590 + -11.3  -4.69622   GACGTATATAAAAAA            CCATCTTTT TTT AAAAGATGG            TTTTTACGCTTCTCT  95 30
HC661_RS19500 3970218 .. 3970245 +  -5.6  -5.36441   TTTTATTTCTGTCAT        GAACTTAGAGAA TAAT TGCTCTGGGTTC         TTTTTTCTATCCCGC  89 24
        yyaC 3971013 .. 3971034 + -10.3  -4.69622   GACGTATATAAAAAA           CCATCTTTT TTTA AAAAGATGG            TTTTTACGCTTCTCT  93 30
        rpmH 3980174 .. 3980220 -  -7.3  -5.81412   TCTATCTAAAAAAAA CGGGCCGCCGGAATACTGAAGA AATT TCTCCAGTA-CCGGGCGACGCA TGACATCTCACTCTC 100 78
        rnpA 3979758 .. 3979776 -  -4.7  -4.70613   AAAACGTGAAGAAAA             CAAAATA TGAGC TATTTTG             ACGAAGATTTCTTAT  72 18
        yidC NONE
HC661_RS19540 3978207 .. 3978235 -  -8.1  -5.84381   TTACCAATAAAAAAA        CCGAAGTTCCGAT TTT ACCCGGACTTCGG        TTTTCTGCTATCTTT 100 11
        mnmE NONE
        mnmG NONE
        rsmG 3973886 .. 3973904 -  -2.5  -3.79687   ATTTTGCAGAAAATA            TGATG-GA ATTG TCACATCA             GGCTGTCTAAATTAC  53 37
         noc 3972919 .. 3972939 -    -9  -5.54338   TAATTAAAATAAAAA            CTCCCCTG CTGAT CAGGAGAG            TTTTTATTTAGGTAT 100 29
         soj NONE
HC661_RS19510 3971013 .. 3971034 - -10.3  -5.38047   GACGTATATAAAAAA           CCATCTTTT TTTA AAAAGATGG            TTTTTACGCTTCTCT 100 29
HC661_RS19495 NONE
HC661_RS19490 3968243 .. 3968254 -  -3.6  -2.57672   TATATGAAAAAGCAT                GAGC GCCA GCCC                 TTATGATGTAGGCTC  43 26
HC661_RS19485 3966028 .. 3966058 - -11.2  -4.01158   AATTGCATTAAATAA       CGTCGATTTTCCGA CAT TCGGCAAACCGACA       ATTCCAGCAGTTAAA  90 172
HC661_RS19460 NONE
HC661_RS19455 3962800 .. 3962811 -  -3.6  -2.57672   TATATGAAAAAGCAT                GAGC GCCA GCCC                 TTATGATGTAGGCTC  43 26
HC661_RS19450 NONE
        ychF 3959475 .. 3959485 -  -2.6  -3.27476   ATGGGCAAGGAGCAA                 TAAT TCT ATTA                 CTCACAAGTTTATAT  46 75
HC661_RS19440 NONE
         ssb 3958584 .. 3958600 -  -6.5  -3.45033   GATAATCTATTAGAA              CGGAAGA TCA TCATCCG              AGATGTCAATCGGCT  62 3
        rpsR 3958257 .. 3958282 - -13.3  -5.72616   ACTGATATAAAAAAA         GAGCAGGAGCC CGCA GGCTCTTGCTC          TTTTCTTTCGGCTTA 100 38
HC661_RS19425 NONE
HC661_RS19420 NONE
         xth 3956178 .. 3956204 -  -8.8  -5.24129   TTCGGTGATAAAAAA         GCAGCAAGAG TGGATTT CTCTTACTGC         TATCTCATCATAAAT  93 33
HC661_RS19410 3955192 .. 3955210 -  -2.5  -3.93583   CAATCTATTTATAAA            GCATGAAA CCCA TTTCA-GC             TCAAGACTTTTTCCG  53 26
HC661_RS19405 3954751 .. 3954773 - -14.2  -5.64006   ATTTAATCAAAAAAA           CAGTGCGGAA TCA CTCCGCACTG           TTACACTGTGATTTC 100 26
HC661_RS19375 3948438 .. 3948456 -  -3.8  -5.61881   TTCTAAAAACAAAAA             GGACAACA TAT CGTTGTCT             TTTTTCATTACAAAT  85 158
HC661_RS19365 3947151 .. 3947175 -  -6.5  -4.93595   AGAAAAACTGAAAAA          CACCGTTCT GATGAGT AGAACAGTG          TAAAAAAATATTCCT  82 134
HC661_RS19350 3944078 .. 3944094 - -10.8  -4.72631   ATTAACTTAAGAAAA              GCCGCC CTGTT GGCGGC              TTTTTTACTGGTTTT  93 123
HC661_RS19340 3942062 .. 3942072 -    -4  -3.48593   TATTTTCTGACATAA                 GATA ATA TATC                 GCAGCCCTCTCTAAC  52 79
HC661_RS19335 3941548 .. 3941562 -   -10  -5.20216   GAGACTATTAAAAAA               CAGCCT TAT AGGCTG               TCGTTTTGTGTATAT 100 84
HC661_RS19320 3939191 .. 3939204 -  -2.5  -3.72073   ATTCATTAAAAGGAA               TTAAT AACC ATTAA                TAATCTCTTTTATTC  50 22
HC661_RS19315 3938113 .. 3938131 - -11.7  -5.40072   CCTTTTTTAAAAAAA             GCTGCCG ATTAA CGGCAGC             TCGCTTCTTAATGAT 100 33
HC661_RS19310 NONE
HC661_RS19305 NONE
HC661_RS19300 3936480 .. 3936504 - -15.8   -5.7827   AACAGAAATAAAAAA          GAGGGCTTCC TTTCC GGAAGCCCTC          TTTCCGTCTGCTACG 100 36
HC661_RS19290 3934802 .. 3934833 - -11.7  -4.83615   GATTCCGGACAAAAA      CAAAAGCCGATGC GCGCAG GCATCGGCTTTCA       AATTAACCTAAACAT 100 40
HC661_RS19285 3933428 .. 3933439 -  -4.4  -2.98823   CTCTCTCGATATATA                GAAC GTAC GTTC                 CTCATTATACTACAC  49 40
HC661_RS19280 3932824 .. 3932851 - -13.6  -4.12738   GCATAGCAAACGAAA        CAGCCAAATCAC TCAT ATGATTTGGCTG         TTTTACGGATATCAC 100 66
HC661_RS19250 3926050 .. 3926076 - -10.2  -6.25578   ATGAAATAAAAAAAA         GCAGCAAGGAAT TTA ATCCTTTGCTGC         TTCTTATTTTTGAGC 100 29
HC661_RS19240 3925074 .. 3925094 -  -4.7   -4.7219   CATACGAATAGAAAA            GAGCAGC TTAGACG ACTGCTC            TTTTGACGCCGCAAT  72 203
HC661_RS19235 NONE
HC661_RS19230 3922082 .. 3922093 -    -3  -2.54434   TGTAAGAAAATAACC                TTCA TCTC TGAA                 CGCCTCCCTCAAAAT  41 15
        rplI 3921606 .. 3921622 - -15.1  -5.90981   TGACATGAAAAAAAA              CCCGCCG GAT CGGCGGG              TTTTTCATTGTGTAT 100 40
HC661_RS19220 NONE
HC661_RS19215 NONE
HC661_RS19210 NONE
HC661_RS19205 NONE
HC661_RS19200 NONE
HC661_RS19195 NONE
HC661_RS19190 3915161 .. 3915173 -  -3.3  -4.63928   ACAGCACCGGAAAAA                CAAGC TCA GCCCG                GCAAGGAATGACAGG  66 169
HC661_RS19175 3914404 .. 3914423 -  -9.2  -4.63486   ATCCTTTTAAGAAAA            GCCTTCGC CCGA GCGAGGGC             TTTTCTTATTCGATG  88 31
HC661_RS19160 3912102 .. 3912120 -    -6  -5.29445   CTTTAATAAGAAAAA             GAACCC GTAATCA GGGTTC             TTCAAACAGTCATTT  87 39
        purA 3910565 .. 3910588 - -16.8  -5.71712   TCCTACATAAAAAAA          CAAGCCTCCG TGAC CGGAGGCTTG           TTTGCTGCAAATTCT 100 40
HC661_RS19150 NONE
HC661_RS19145 3910170 .. 3910211 -  -8.2  -3.27022   CGGACCTTACAGTAA TTTGT-C-CGGAGAGCCG TATCGTGG CGGCCCTCCGAGGACAAA TAAGGAGTTAGCAAT  66 56
HC661_RS19140 3910033 .. 3910049 -    -3  -3.14132   CCGTTGCTCTACCAA             CTGAGCT ACCG AGC-CAG              ATGTTTCTTTTCTAT  44 60
HC661_RS19135 3909943 .. 3909964 -  -8.7  -5.92399   TAACAAAAGAAAAAA           CGCACCTAC TATT GCAGATGCG            TTTGGGTAAGTGGCT 100 34
        walR NONE
        walK NONE
HC661_RS19120 3905584 .. 3905594 -  -3.2  -3.50853   GTCGCGGAATCAGAA                 GACA GGT TGCC                 GAAAGTGATATGATC  50 171
HC661_RS19110 3904111 .. 3904125 -    -7  -3.18031   TTTGGAAAAATTACA               CGGCGC ACA GCGGCG               TCGGGATTTTCGGAT  60 6
HC661_RS19105 3902788 .. 3902829 - -16.1  -4.71791   ATATTAACAAATAAA TCAATAAAAAACAGCCCGG ATGT CCGGGCTGTTTTTTATTTC  TGTAATCGATCCGCT 100 19
HC661_RS19100 NONE
HC661_RS19095 3900482 .. 3900498 -  -9.4  -4.03586   CCTGAAAGATAATAA              CTCCCC AATGA GGGGAG              TCACGGCTTTACTAG  86 216
HC661_RS19090 NONE
HC661_RS19085 NONE
HC661_RS19080 NONE
HC661_RS19075 NONE
HC661_RS19070 3894510 .. 3894529 -  -9.3  -5.72616   ATCCATACAAAAAAA            GGCTGAG TTGCTC CTCAGCC             TTTCGTTTATATCTG 100 32
HC661_RS19060 NONE
HC661_RS19055 3891949 .. 3891976 - -13.6  -4.36914   TTCCCGCTGACAAAA        TAGGAGCAATCC AATT AGATTGCTCCTA         CTCAACAGTTATTTA 100 34
HC661_RS19050 NONE
HC661_RS19045 NONE
        rocF 3887936 .. 3887953 - -12.7   -5.7946   GTGGCAACAAAAAAA             CCTCCGC AGGT GCGGAGG              CGCATATTTTATAAC 100 34
HC661_RS19035 NONE
HC661_RS19030 3886050 .. 3886070 - -10.4  -4.93661   AGATGAATAACAAAA            GAGGCCCA TCGTG CGGGCCTC            TTTTCATGACAGCTT  93 29
HC661_RS19020 NONE
HC661_RS19015 NONE
HC661_RS19010 3882095 .. 3882114 -  -6.4  -4.91109   GTTTCATTATAAAAA            GCTTACCA AAAG CGGCAAGC             TCTTTTCAAATCTGC  82 46
HC661_RS19005 3881650 .. 3881675 -  -8.3  -4.60889   AATCACGCGCAAAAA         GAGCCGG-TGTT TTC AGCATCCGGCTC         TTTACGTGTTTTCTC  87 27
HC661_RS19000 NONE
        rlmH NONE
HC661_RS18990 3879182 .. 3879204 -    -5  -4.84359   TTATTTGGATAAAAA           CCTTTATTAC TGA ATAATAAAAG           TGAATTTTCTTGAGA  77 368
HC661_RS18985 3876421 .. 3876431 -  -2.6  -3.09202   AGATATATCGCAAGA                 TTTT ATA AAAA                 CAATGATTATTTGAA  43 100
HC661_RS18970 NONE
HC661_RS18965 NONE
HC661_RS18960 NONE
HC661_RS18955 NONE
HC661_RS18950 NONE
HC661_RS18945 3868160 .. 3868172 -  -4.7  -3.43676   CCTACCAATCCACAA                CAGGC ATC GCCGG                CTACACGCTCTTATA  52 288
HC661_RS18935 3864562 .. 3864586 - -12.9  -5.85244   AATCAAAACAAAAAA          CGGCATACTGC ATG GCAGTACACCG          TCTGAAGCAATTCAA 100 37
HC661_RS18930 3863189 .. 3863208 - -13.6  -3.69434   GGAATTAATGTGAAA            GCCGCCAT ATGA ATGGCGGC             TTTTTTAAATATACT  95 43
HC661_RS18915 3860009 .. 3860032 -    -6  -5.71712   TCGGAGAGAAAAAAA          CGCTGCAC GACATCAT GTGCAGCA           CCCGTGTTGTCTATA 100 83
HC661_RS18895 NONE
HC661_RS18890 3856028 .. 3856047 - -12.2  -5.95539   CTCTAAATAAAAAAA            GAATCCGC GCAC GCGGATTC             TTTTTTATTATTTTT 100 33
HC661_RS18880 3853345 .. 3853372 - -13.4  -5.36314   GAAAACAGCAAAAAA        GAACCCGGCCTG TTTT CCGGCCGAGTTC         TTTTTCATCATCCTC 100 39
HC661_RS18875 3852074 .. 3852099 -   -12  -3.71998   CACGCATGAAGAGAA         GGCTCTTTCT GATAAG AGAAAGAGCC          AGCTGTGCGCCGTAT  89 40
HC661_RS18870 3850847 .. 3850859 -  -3.4  -3.33815   ATCCTCGGCAATGAA                GATG TTGAT CATC                TGCTACCATCCTTTT  48 21
HC661_RS18865 3850220 .. 3850239 -   -10  -4.52502   GCGAAAAAGAAACAA            GCCAGTGC AAAA ACACTGGC             TGAACAAGCTGAGGG  91 45
HC661_RS18855 3848991 .. 3849013 -  -8.5   -5.5112   TTTATCAATAAAAAA           GAGAGAATG TTGAT CATCCTCTC           CTCTCTGCTTCTTTC  95 16
        htpG 3846918 .. 3846942 - -15.8  -5.80364   ACTGTAATAAAAAAA          GGAATCGCCC CCGCT GGGCGATTCC          TTTTTGGCGTCATAC 100 35
HC661_RS18830 3841688 .. 3841715 - -11.3  -5.09259   GATGGTAAAAGAAAA        CCCGGACGG AATCACAAAG CCGTCCGGG         CCGGCTGTCAGATCA  95 38
        iolB NONE
        iolC NONE
        iolD NONE
        iolE NONE
HC661_RS18805 NONE
HC661_RS18800 NONE
HC661_RS18795 3833666 .. 3833709 - -11.8  -2.55351   GTTTTCGATATGAAG GGAGTCCGGCAG-G-AGGGC TTGTTT GCCCCGCTCCGCCGAACTCC GTACTCAGCTTATGC  81 35
        iolI NONE
         fba 3831878 .. 3831914 - -11.1  -3.91402   GGACATAAACGGAAA   GACGAAA-GCACTCAC GATGTT GTGAGTGCTTTTCATC    AGCCGACCTGCTGTT  86 24
HC661_RS18765 3828201 .. 3828211 -  -3.2  -2.81543   CATGAGTAAAAAAGT                 CTCG ATA CGAA                 GTAAAATGCTATCCT  44 52
HC661_RS18760 3826748 .. 3826770 - -14.2  -4.06384   CTGCAACATGAGAAA           GCGGGCCTTT ATA AAAGACCCGC           TTCTCCCTTTCTCAA 100 58
        yxdJ NONE
        yxdK 3824922 .. 3824954 -  -5.7  -5.10767   CATTTAACATAAAAA      TCCCCTTGACA TAAATCCATGT TATCAAGGGGA      AACAGAACGAGCTAT  81 61
        yxdL NONE
        yxdM NONE
HC661_RS18735 3821834 .. 3821859 -    -9  -6.28401   TAAAAAATAAAAAAA         GCGGCACAGT CATGAC ACTGTGCCGT          TTTTCATGTTCACTT 100 35
HC661_RS18725 3820308 .. 3820336 -    -9  -3.64703   GGCCGGTCATGCAAA       TGACAAAGCGCGA GATA CCG-GCTTTGTCA        TTTGTTTTTATCTCT  76 33
HC661_RS18710 NONE
HC661_RS18705 3818345 .. 3818360 -    -4  -4.37737   CAATGAAAAATCAAA              CGGACGA GTT TC-TCCG              CCTTCTCTTCGTATA  64 5
        yidA 3817440 .. 3817458 -  -7.4  -5.02476   ACACGCGGTAAAAAA             GCACCC TCTGATG GGGTGC             CTATTTTTTCAGCAC  86 26
HC661_RS18695 3816384 .. 3816398 -  -2.8  -2.78384   CTTTTTCCTAGGATA               CGTTTA GAA TAACCG               AATTTTGAACATATG  42 74
        deoC 3815652 .. 3815686 -  -5.6  -4.70887   GCATCAACAAAGAAA     GAGGATGGCGGAAGCT TTC AGCTTCCGCACTGCTG     ATTAATAGTCGCTGC  75 27
HC661_RS18685 NONE
HC661_RS18680 3813051 .. 3813075 - -10.1    -5.626   CATGCCATAAAAAAA          GGCACATAC TGATGAG GTATGTGCC          TTTCTTCTCTTATTC 100 35
HC661_RS18645 3803864 .. 3803901 -  -7.3  -5.42131   TAACTATATAAAAAA   TGAATCTCTTCTTCA GATAATAA TAAAGAAAAGATTCA    TTCCTTAGAGATTTA  93 66
HC661_RS18640 NONE
HC661_RS18635 3801463 .. 3801512 -  -6.7  -5.94713   AGGGTATAAAAAAAA CCCAAACTGCA-CAGCACACGGGG GTCTT CCCC-TGT-CTGACGCAATTTAGG TTTTGCCTGCGGTTT 100 326
HC661_RS18630 3799525 .. 3799535 -  -4.6  -3.40403   TTTTTTTCAGGATAA                 CGCC AGA AGCG                 CTTCGTTCGGTTTGA  52 6
        ascB NONE
HC661_RS18620 3797548 .. 3797563 -  -8.2  -5.52384   TTCTCATGAAAAAAA              CCCCGC ATCA GCAGGG               TCTTCTGTTTAATGA  93 34
HC661_RS18615 3796496 .. 3796512 -  -7.2  -5.79595   CCCCAAAATAAAAAA              GCAGCC GGTAT GGCCGC              CTATATACGGGTGCT 100 26
HC661_RS18610 3795282 .. 3795298 - -15.1  -5.74122   TATCATATAAAAAAA              CCGCCGG CTG CCGGCGG              TTTTTCGTATTATGG 100 35
HC661_RS18605 NONE
HC661_RS18600 3787687 .. 3787715 -   -14  -5.40474   ATTTTTTTAAAAAAA        GCCTGTTGACCA AAAGA TGATCAACAGGC        TCATCTATTTTTTAT 100 37
HC661_RS18595 3786962 .. 3786980 -  -9.6  -4.69053   CATTATGTAAGAAAA             GAGAGGCT GGG AACCTCTC             TTATTTGTTTATTTA  93 95
HC661_RS18585 NONE
HC661_RS18580 NONE
HC661_RS18575 NONE
HC661_RS18570 NONE
HC661_RS18565 NONE
HC661_RS18560 NONE
HC661_RS18555 3781366 .. 3781382 -  -9.4  -5.41143   GACGGCGTAAAAAAA              GCCTGC GCGCG GCAGGC              TTTTTTTTTATTTCT 100 33
HC661_RS18545 3778981 .. 3779033 -  -5.8  -5.47399   TGAATCTTAAAAAAA CCTAAATTACCATCAGCAC-AAACA GAAA TGATCAGCGCTCATTGTAATTTAGG TTTTGCCTGCTTATC  89 103
HC661_RS18540 3778111 .. 3778132 - -13.1  -5.26875   GTTTTAATTAAAAAA           GGATTTCCG CCAG CGGAAATCC            TTTTCTGTACATTAT 100 37
HC661_RS18530 3774538 .. 3774559 -  -6.5  -5.55769   TTTCACAAGAAAAAA           GCGCCCCTC TCAT AAAAGGCGC            TTTTTCATTCTTATA  95 36
HC661_RS18525 3773976 .. 3773998 - -10.6  -5.93809   TCTCCATAAAAAAAA           GAGACATGGA AAA TCCACGCCTC           TTTTACCGTGAAGGT 100 28
HC661_RS18520 3773149 .. 3773179 - -11.9  -6.09196   GGTAAAAGAAAAAAA       GCGATACCGCTCC GTTTT GGAGTGATATCGC       TTTTTTTTATTGATA 100 32
HC661_RS18510 3770437 .. 3770455 - -10.3  -6.23545   TGGAAATAAAAAAAA             GACACGC GATTA GCGTGTC             TTTTCCGTTTTACAG 100 35
        galE 3765229 .. 3765253 -   -13  -4.66318   ATGACCGTAATAAAA          GAGACCTTCA CCATT TGAAGGTCTC          TTTCTTTTTACACCT 100 33
HC661_RS18475 3763299 .. 3763316 -  -9.1  -6.17268   GCATAAGAAAAAAAA             CCTCCGC GCAG GCAGAGG              GATCCTTTTTATTTA 100 34
HC661_RS18470 NONE
        ugpC 3761019 .. 3761040 - -11.6  -5.21709   TGTTACATCAAAAAA           GCCGGACA TCCAGC TGTCCGGC            TTTGCGTTATGAGCG 100 32
HC661_RS18460 3760081 .. 3760100 -   -15  -5.58209   TTAAACTGAAAAAAA            GCCTCCGC ATAT GCGGAGGC             TCTGTTATTTCATCA 100 30
HC661_RS18450 3756818 .. 3756834 -  -5.1  -2.79117   GTACAAACCAAAGAT              CATGAAG TGA CCCCATG              GTAAACCTCCTGACT  50 8
        cydB NONE
        cydD NONE
        cydC 3752366 .. 3752385 - -10.7  -5.94713   ACCGCACAAAAAAAA            CAGCCGC TTGCTT GCGGCTG             TTTATGTTCTGATCG 100 27
HC661_RS18430 3751436 .. 3751458 - -11.3  -3.69534   GGTAAAACAACAAGA           GGCGCCTTC TCTAT GAAGACGCC           TTTTCTTTATTCATA  88 32
HC661_RS18420 3748760 .. 3748777 -  -7.7  -5.99154   TATTAAATAAAAAAA             CAGGACA ATCG CGTCCTG              TTTTTTTTTGAGCTA 100 38
HC661_RS18350 3734833 .. 3734851 - -11.7  -5.41746   AAGCCCGTAAAAAAA             CAGCCGG ATCAG CCGGCTG             TTCGGGATGCGGACA 100 201
HC661_RS18345 3732698 .. 3732717 -  -6.6  -2.83715   GTTAGTACCATCATA            TTATGAAA TCGC TTTCATAA             CTACTCAGGCTTTTT  57 47
HC661_RS18340 NONE
        celB NONE
HC661_RS18330 NONE
HC661_RS18325 3729250 .. 3729267 -  -8.4  -5.43514   AAAATAAGCAAAAAA             CCCGGA ATCGAA TCCGGG              TTTTTTTACTGCTCT  95 40
HC661_RS18290 3722264 .. 3722287 - -11.1  -5.94713   ATGTCATAAAAAAAA          GCAAATGCC GATTAT GGCATTTGC           CCTTTCATTTGATCA 100 38
HC661_RS18285 3721482 .. 3721520 - -12.5  -5.20783   ACGTAAACATAAAAA  CAACCAGCCGGACTGC ACATAAAA GCGG-CCGGCTGGTTG   TGATGCGTCGATCGT 100 41
HC661_RS18280 3720370 .. 3720401 - -11.7  -6.15717   GAAATAGAAAAAAAA      CGCTTATG-AGCCG GATAA CGGCTTCACAAGCG      TTTCATCACACCTGC 100 41
        celB 3717098 .. 3717113 - -11.8  -5.42259   CCAGCGTTAAAAAAA              CGGGCG AAAG CGCCCG               TTTTTTTTATGTTTC 100 32
HC661_RS18260 3715192 .. 3715217 -  -6.1  -3.65046   TTTGCAGCCGAACAA         GGTTATCAGCC TGTC GGCTTATCACC          GTTTGCAGGTTATGC  61 235
HC661_RS18230 NONE
        thiM NONE
HC661_RS18220 3709652 .. 3709674 - -12.7  -5.03994   GCGCACACAGAAAAA           GGGCCGTCC TATCG GGACAGCCC           TGCTTTGGAGCGCTG 100 11
HC661_RS18215 NONE
        efeB 3707970 .. 3707989 -   -10  -4.56597   GTGTTTTTTTAAAAA            CACCCTCC ATAT GGAAGGTG             TCACGATTCCAGCAG  91 26
HC661_RS18205 3707269 .. 3707291 - -14.9  -3.64866   ACACTATATGGCAAA           GCCCTCTCG CTGAT CGAGAGGGC           TTTTTTCGGGTTAAC 100 36
HC661_RS18185 3704501 .. 3704512 -    -3  -3.33315   TGAATATCCCCATAA                TGAT ATAC ATCA                 TAATTTCTCTGTAGC  46 103
HC661_RS18180 3704096 .. 3704117 -  -4.4  -2.82516   CCTTTCACCATTACA           CTTTCCCC CGGGGC GCGGAAAG            AAACCGTTATGACAC  48 32
HC661_RS18175 NONE
        galT 3701347 .. 3701370 -    -8  -6.00086   AGAGGATAAAAAAAA          GCCTCGTCCC TTAT GGGATGGGGC           TTTTTTCCGGTAGAG 100 12
        qoxA NONE
        qoxB NONE
        qoxC NONE
        qoxD 3696620 .. 3696643 - -13.2  -5.33866   TAAAGGCACAAAAAA          CCCTCTTCGC CTGA ACGAAGAGGG           TTTCTTTTTATTCCT 100 33
HC661_RS18135 3695572 .. 3695593 - -10.9  -5.24129   TTTTCCGATAAAAAA           CCCCTTCTC GTCA GAAAAGGGG            TTTCAGCTTATGTTT 100 28
HC661_RS18130 3694179 .. 3694201 -  -9.1  -5.95539   CTCTAAACAAAAAAA           GACAGCCCG AAGAA CGAGCCGTC           TCACATTAAGAATTG 100 31
        nfsA 3693328 .. 3693347 -   -10  -5.19879   CGTGAAACATAAAAA            CCTCTCCC GGTC AGGAGAGG             TTTTTTCTTAATTCT 100 33
HC661_RS18120 3692159 .. 3692180 - -11.6  -3.77953   TGAATAACCGAACAA           CCCTGCTG GAGCAT CAGCAGGG            TTTCTTTCTGATCAT  88 37
HC661_RS18110 NONE
HC661_RS18105 3688022 .. 3688041 -  -9.4  -6.06723   GTTTTCAAAAAAAAA            GTCTGTTT CTCG AAACAGAC             GCGTTATTCCGGGTT 100 29
HC661_RS18100 NONE
HC661_RS18095 3684924 .. 3684946 -  -3.4  -2.50789   ACTGAGAAAACAACT           CCTTTTATTC CTG GAATCATAGG           CTTTCGTTTGAAGAA  42 86
HC661_RS18090 3684643 .. 3684669 -  -8.7  -5.04377   GGAAAATAAAATAAA         TATCCCCCTCA TTACC CGAGGGGGATT         ATTTCATTTTTTTCG  90 24
HC661_RS18080 NONE
HC661_RS18075 3681913 .. 3681938 - -15.5  -5.09426   CTGAACGCCAAAAAA         GGCGCTTTCCGC CGG GCGG-AAGCGCC         TCAAAAAAACCGTTT 100 39
HC661_RS18070 NONE
HC661_RS18065 NONE
HC661_RS18060 3679658 .. 3679686 -  -5.4  -4.19307   GAGATAAATCAGAAA       GCCAATCGCTC ACTTGACA GAG-GATTGGC        TTTTTTTCTTTATAA  67 35
HC661_RS18050 NONE
HC661_RS18045 NONE
HC661_RS18040 NONE
HC661_RS18035 NONE
HC661_RS18030 NONE
HC661_RS18025 NONE
HC661_RS18020 NONE
HC661_RS18015 NONE
        rfbB NONE
        rfbD NONE
HC661_RS18000 3668636 .. 3668656 -  -9.8  -5.33785   AATCAGCACAAAAAA            CGAAGACA TCCGC TGTCTTCG            TCTTGTGCGCTATCG 100 35
HC661_RS17995 3667959 .. 3667976 - -11.3  -5.60993   TTGTGTATAAAAAAA             GAGGCTG TTGT CAGCCTC              TTTCATCCTGGATTA 100 38
HC661_RS17990 3666459 .. 3666509 - -15.1  -4.19238   GCTGTAATCTGAAAA CGCAAAGAAATTTTGCGATCCGCT ATAT AACTGAT-GCAAAATCTCTTTGCG GATAACACTTATACC 100 34
        pruA 3664724 .. 3664751 -  -4.9  -4.64844   CTCATATAGAGAAAA        TAGCGCGAC TCTCTTTTTC ATCGCGCTA         TTTCCGAAAGATTAA  71 37
HC661_RS17980 NONE
HC661_RS17975 3661535 .. 3661557 - -11.9  -4.35747   GAAAAACAAAGTAAA           GCCCGCCGC TTTTT GCGGAGGGC           TTTTTTTCTTATCCG  95 34
HC661_RS17960 3657924 .. 3657934 -  -4.6  -3.53563   ACAGCTCCCCGGAAA                 CGAC AAG GCCG                 ATTTGGACTTCCTTA  54 185
        bacC NONE
HC661_RS17945 NONE
HC661_RS17940 NONE
HC661_RS17935 3652801 .. 3652821 - -15.5  -5.11063   AGCATCTAATAAAAA            CATCCCGCT CTC AGCGGGATG            TTTCTTGTAATGAAG 100 15
         pta 3649871 .. 3649892 - -12.3  -5.60993   CTTTCTATAAAAAAA           GCCGGTCCT CGTA AAGACCGGC            TTTTGCGGATTACAG 100 35
HC661_RS17910 NONE
HC661_RS17905 3646955 .. 3646973 -  -8.8  -6.20267   CCAAAAACAAAAAAA             GCCCGGAC TTA GTCCAAGC             TTTCCTGCGTGCCGA 100 15
HC661_RS17900 NONE
HC661_RS17895 NONE
HC661_RS17890 NONE
HC661_RS17860 3639743 .. 3639763 -  -8.9  -5.26875   TTTTGAAGCAAAAAA            GCCTGACCC ATC GGGCGAGGC            TGTCGTAAAATACAC  93 43
HC661_RS17855 NONE
HC661_RS17850 3637721 .. 3637746 -  -8.3  -5.16038   AGACAATAAACAAAA         CCAGGCCCGC TTTATGT GCG-GCCTGG         TTTTTTCATCAAAAA  90 59
HC661_RS17840 3635261 .. 3635279 - -11.8   -2.6252   GTATACTATAAGTGA             CCTCTCTT CCA AAGAGAGG             AAACGATAAAGGAGG  81 276
HC661_RS17830 NONE
HC661_RS17825 3633884 .. 3633926 - -11.4   -3.5394   AAACCTCCGCGTAAA CATGAAAAACCCCGAGTC TTGGTTC GGCTCGGGACTTTCCATG TCCTGATTCTGTATC  88 107
HC661_RS17820 3633403 .. 3633438 -  -6.8  -5.00616   TGGCTCGGCAAAAAA    GACTGA-GCCCGGTGCA TTG CGCGCCGGGCTTTAATC    CGCGTCTTCCTCAAG  84 20
        speE 3630276 .. 3630296 -    -9  -5.00616   CTTTCCTGTAAAAAA            GCGCAAGA TTCGC TCCTGCGC            CGTACGTTTTTATTT  90 35
        speB 3629341 .. 3629366 - -11.9   -5.1764   TATACAATATAAAAA         TCCCCCGCCATG TTT CA-AGCGGGGGA         AATTCTTTCTATTTC 100 34
HC661_RS17800 3628957 .. 3628971 -  -4.9  -4.65722   GCATATATAAATAAA               CCCCC TCAAT AGGGG               TTTTTCTTTCATTTC  71 43
HC661_RS17760 3623790 .. 3623802 -  -3.4  -2.70354   CCTTTTAGAAATGCA                CAAC ATATA GTTG                ATTAAATCGCAATAG  43 27
HC661_RS17755 3621993 .. 3622007 -  -7.8  -2.78015   CCAACGATGTCAAAG               CGCTGC GTG ACAGCG               ATAAAAACGTCCGCC  59 406
HC661_RS17745 NONE
HC661_RS17740 3619585 .. 3619608 -  -8.2  -5.76633   TTATATACAAAAAAA          GAACAAAGCC CGAA GACTTTGTCC           TTTGATCATCATTAC 100 37
        narK 3618217 .. 3618247 -  -2.6  -4.16842   CTCACCTCGAAGAAA       GTCACGTTGC GTATGTATATT GTAACGTGAC       TTGATTTGCACTCAC  57 74
HC661_RS17730 3617455 .. 3617475 -  -7.6   -4.6902   TCACAAGCTGAAAAA            CAAGGACA CCGGC TGCCCTTG            TTTTTTTCAGTCAAT  83 32
HC661_RS17720 3616102 .. 3616122 -  -8.3  -5.86061   CGTCATCAAAAAAAA            CCGGTTC TGTTTAG GAACCGG            GTTCGGCGTTTTCAT 100 15
HC661_RS17715 NONE
        narH NONE
        narJ NONE
        narI 3609520 .. 3609539 -  -8.6  -5.31275   TTTCACCATAAAAAA            TCCCCCTCT TGC AG-GGGGGA            TTTTTACGTGCGTTT  93 29
HC661_RS17695 3608750 .. 3608773 - -14.6  -4.90217   TAAACATATGAAAAA          GCCTCTCCGC ACGA GCGGAAAGGC           TTATGATGAAGCTTC 100 26
         cls 3607169 .. 3607186 -  -8.5  -4.12902   CAAGGAGTTTTAAAA             GCGTTTT TTAT AAAACGC              CGGAAAATAACCGTG  79 15
HC661_RS17685 3605321 .. 3605359 -    -8   -6.0427   ACTACATAAAAAAAA   GGATAGACAGGAGGCTGC CCG GCCCCCGCTCGTCTATCC   TTTTTCTTTTATTAA 100 37
HC661_RS17660 3599658 .. 3599685 - -17.2  -4.70107   GATGAAAATAAGAAA        GCTCCCTTTCAA TTTC TTGAAAGGGAGC         GTAGCACTCTTATGA 100 121
        pyrG 3597897 .. 3597924 -  -8.4  -5.28176   CTGATGCAGAAAAAA        GACTTGCCGCTT TTAA AGGAGGCAAGTC         TTTTTTTATTACTTC  93 34
       spo0F NONE
HC661_RS17640 3595748 .. 3595771 - -12.4  -4.68545   AGGTAAGACATAAAA          CCGCCTGTCA ATGC TGTCAGGCGG           TTTATGGATGTTACA 100 46
         fsa 3594992 .. 3595025 - -12.5  -2.99568   ACAGGAAAACATAAG     GGTGCGGCAAACAGAT GCA ACCGGTTTGCCGC-CC     TTTTCACCCTTATTT  84 35
HC661_RS17630 NONE
        glpX 3592403 .. 3592431 - -17.6  -4.13767   CTCTTTATTGCAAAA        GAAAAGCGGGAC TTTCC GTCCCGCTTTTC        TCTATTTATGGCCGG 100 31
         rho NONE
        rpmE 3590382 .. 3590405 -   -14  -5.38047   TATGGACATAAAAAA          CAGGCAAGAA GCAA TTCTTGCCTG           CCTGTAAAATCTATT 100 42
HC661_RS17610 3589711 .. 3589730 -  -2.8  -5.51165   AAAACGTCAAAAAAA            CACCGG ATTTTTTA CCGATG             TTTTCATGAAAAGGG  78 48
HC661_RS17605 NONE
HC661_RS17600 3586704 .. 3586722 - -14.6  -5.27477   ATTCTAATCAAAAAA             GCTCCCTG AAA CAGGGAGC             TTTTCATTATGCAGT 100 32
        prfA NONE
        prmC 3583564 .. 3583589 - -16.9  -4.65916   TCCATTGTAACAAAA         GCCCGCCGTGTG CGT CAC-CGGCGGGC         TTTTTTCATGATGTG 100 31
HC661_RS17575 3583241 .. 3583252 -  -2.2  -4.78848   GCTGCAAAGACAAAA                TCCG GCTA CAGA                 AGCGTAATCAGCAGA  64 19
      spoIIR NONE
HC661_RS17560 3581464 .. 3581496 - -12.9  -4.63218   TGTCCTTTAATAAAA      CAAGTGTTATCCACA AAC TGTGGACAACACTTT      TTAATAAGTGGATAA 100 59
HC661_RS17555 NONE
HC661_RS17550 3579674 .. 3579692 -  -4.6  -5.59655   TAAATGAAGAAAAAA             GAAACG GCATCTT CGTTTC             TTTTTTTACGTATCT  89 40
HC661_RS17545 3579079 .. 3579089 -  -2.4  -3.06696   GGCTGGGCGAAGACA                 GCCC AGT GTGC                 TTGTCCTTTTTATTA  42 114
        rpiB NONE
HC661_RS17535 NONE
        glyA 3576608 .. 3576632 - -14.3  -5.77632   AAAATCATAAAAAAA          CCCGCCGGA TTAAGGT TCCGGCGGG          TTTCTTCCTTATTAA 100 37
         upp 3575852 .. 3575875 -  -7.5  -5.61596   ATCTGGATAAAAAAA          GAAAACCCC CTGAAT GAGGTTTTC           CGATTTATTTGGTTC 100 30
HC661_RS17520 NONE
        atpB NONE
        atpE 3573978 .. 3573993 -  -6.1  -4.82901   CTCTGCTGATAAAAA              GCCGT TTTGGG ACGGC               GTGCTTATCAGACAT  80 107
        atpF NONE
HC661_RS17500 NONE
        atpA 3571314 .. 3571340 - -13.2  -4.57569   TCATTTGCGTAAAAA         GAGAGAAAAAGA GAA CCTTTTTCTCTC         ATCTTCTAAGGGTTA 100 38
HC661_RS17490 3570424 .. 3570436 -  -6.9  -3.59979   TCTTTCTATTCTAAA                GCGGC TGC ACCGC                CGACAATTTCGGTAA  64 3
        atpD NONE
HC661_RS17480 3568511 .. 3568540 - -15.9  -5.10064   GTTAATATAGAAAAA       GAATCCTTCTCAG ACAG CCGAGAAGGATTC        TTTTTTAGTTTCCTG 100 30
HC661_RS17470 3567557 .. 3567569 -  -4.7  -4.10855   AAAACTTCGTCAAAA                CTCGC CAA GCGGG                TGAAGAAAAATTGGT  61 83
HC661_RS17465 NONE
        murA 3565366 .. 3565388 - -11.4  -5.75599   TAAACCATAAAAAAA           CAGTATGCCA GAT TGACATACTG           TTTTTACAGCCATTA 100 38
      spoIID 3564151 .. 3564172 -  -7.3  -5.41143   TAGTTTTCAAAAAAA           CAGACGCTC ATGA AAGCGTCTA            TTTTTTCGCCATATA  93 23
HC661_RS17450 3563197 .. 3563213 -  -5.7  -6.23317   ATAAAAATAAAAAAA              GGGCCGC TAA ACGGCAC              CTTTCTTATTCCGCT 100 31
HC661_RS17445 3562204 .. 3562220 -  -9.4  -5.63517   TTTCTAAACAAAAAA              GACGCC GCGCG GGCGTC              CTTTTTTAACCTATT 100 36
HC661_RS17440 3561965 .. 3561981 -  -8.7  -5.40072   TGCGGTTTAAAAAAA              GAGCCCT CTT AGGACTC              TATGTTTCATTGCGA  95 25
        fdhD NONE
        moaA 3560027 .. 3560048 -  -9.4  -5.45652   ATTGTGAATAAAAAA           GCCTGCCC TTGTCC GGGCAAGC            TTTTCTTCATCCGCC 100 32
HC661_RS17425 3558702 .. 3558726 - -11.6  -5.61596   ATGTGCATAAAAAAA          TAACCATCTG CTGAT CAGATGGTTA          AGAAAAATTATATAT 100 33
HC661_RS17420 NONE
HC661_RS17415 3557829 .. 3557846 -  -9.9  -5.18726   TTCTCATAACAAAAA             GCCCAAA ATAT TTTGGGC              TTTTGCTGTGTTTCA 100 49
        ureA NONE
        ureB NONE
        ureC 3555094 .. 3555112 -  -9.5   -3.4096   AATAGAGGGTAAACA             GGCCGGC GGGAA ACCGGCC             GAAGAGGGATTAAAA  75 35
HC661_RS17395 3554570 .. 3554589 -    -8  -2.56715   AGCGGCATGAACCCA            TCTCTTTT TAAC AAAAGAGA             TGATTCATTACATCA  61 13
HC661_RS17375 3550476 .. 3550496 -  -6.9  -4.98255   TTTGAATGACAAAAA            GAGCTGA TCGCGCG TCAGCTC            TTTTTTAATAAAGCA  84 30
HC661_RS17360 3548487 .. 3548510 - -12.5   -4.4261   GCGGCAATATGAAAA          GCGCCTATC TGAGCT GATAGGCGC           TTTGGGATCAAGATT 100 39
HC661_RS17355 3547999 .. 3548024 -  -9.7  -6.08563   AATATATAAAAAAAA         GCCGGC-GTCTG TCA CAGACTGCCGGT         TTTTGTATGTTTGGC 100 11
        ftsW 3546057 .. 3546083 - -14.5  -3.46271   TATAAACAGGCAGAA        CGCCCGGGGACA GAAA TGTCC-CGGGCG         TTTTTTCAGCTTCAT 100 40
HC661_RS17330 NONE
HC661_RS17325 3542251 .. 3542271 - -12.6  -5.40625   ACATTACACAAAAAA            GAGACGGG GAGAG CCCGTCTC            TTTTTGTTGCGCCCG 100 41
HC661_RS17320 3540646 .. 3540664 - -17.4  -4.95155   CTGATATGACAAAAA             GCCGGGGG CAG CCCCCGGC             TTTTTTTATTCGGCC 100 31
     spoIIID 3538366 .. 3538387 -  -3.5  -5.31275   CGGGAGGAGAAAAAA           GGGCCCGGC AGAC GTCAGGCGC            TACGGCTGCTGAACG  76 25
         mbl 3537174 .. 3537196 -  -8.5  -5.93809   GTTTGACAAAAAAAA           CCCCATTCT TTTTC AGAATGAGG           TTTTATCATCAGCTC 100 34
HC661_RS17295 NONE
HC661_RS17290 3535001 .. 3535021 -  -2.6  -4.25873   CGCCCAGAAAAAAGA            TAAAGAGG CCCTC CCTTTTTA            CAAAAAGGTATTGGG  59 407
        fabZ 3533670 .. 3533688 -  -8.9  -4.52589   CCTTTCTATACAAAA             TGGGCTT TTTAT AAGCCCA             TTTGTTTGCTTTTAT  88 37
        mscL 3533214 .. 3533236 -  -9.1   -4.8269   TATAATCATGAAAAA           GGCCGGACG TTAAT CATCCAGCC           TTTTTTTGTGCCCTA  89 38
HC661_RS17265 NONE
         ssb 3531750 .. 3531765 -    -9  -5.60993   TCCCGCACAAAAAAA              CCAGTC TTTC GACTGG               CGAGTGGGAAGGAGG 100 88
HC661_RS17255 NONE
HC661_RS17250 3529879 .. 3529904 - -11.1  -4.82855   CATTAAACGCAAAAA         GGCCGGCTCTC TCAG AAGAGCCGGTC          TTTTATGTCGTCCTT  93 103
HC661_RS17235 3525125 .. 3525148 -   -11  -5.28683   AGGAAGATTAAAAAA          TCCCGC-GGCC AAG AGCCTGCGGGA          TTTTATGTTGCATAT 100 28
HC661_RS17230 NONE
HC661_RS17225 3523493 .. 3523537 -  -9.4  -3.23855   CTCCTTAAAAAGAAT GGACCGCGCCCATTA-TGACA TTAT TGTCCGTAATAGGCGTAGTCC GAATGTTTCGTTTGT  73 1
HC661_RS17220 3522612 .. 3522623 -  -7.2  -5.23316   CATGATAGGAAAAAA                CGGC GCCG GCCG                 CTGATAATAGCATAA  90 105
HC661_RS17215 3521155 .. 3521175 - -15.4  -4.46926   GATTGTATGATAAAA            GGCCGGCG CGGTC CGCCGGCC            TTTCAAGTGACAGAA 100 28
HC661_RS17210 3520272 .. 3520294 -  -9.9  -5.41746   AATTCCCTAAAAAAA           GGAGACAGT GATTA ACCGTCTCC           TTTGCCTTGTATCAT 100 57
HC661_RS17205 NONE
HC661_RS17200 NONE
HC661_RS17195 NONE
HC661_RS17190 3516963 .. 3516997 - -22.4  -4.17878   TCAAACGAAACTAAA     CAGCCAATCGCCGATA CAA TATCGGCAATTGGCTG     TATGAAGGTGTTTTG 100 94
HC661_RS17180 NONE
HC661_RS17175 3515654 .. 3515684 -  -8.5  -5.14965   ACCCCCACTAAAAAA       GCCTTAAAAGA AAATAAAAA TCTTTTAAGGC       TTTTCATTACTAGAG  90 35
HC661_RS17160 3513526 .. 3513548 -  -8.5  -5.64274   TTATTTATAAAAAAA          CTTGCCGATG ACAA CA-CGGCAAG           CTCTTAACTATAGCA 100 224
HC661_RS17155 NONE
HC661_RS17150 3511990 .. 3512016 -  -7.3   -5.5112   CTGATCAATAAAAAA         CATTTGCAGCC TGCCG GACTGCAAGTG         TTACACGTGATTTTT  93 26
         ggt 3508024 .. 3508043 - -12.2  -4.72386   GAAACTAGTCAAAAA            GACCCCTT TCGA AAGGGGTC             TTTTTTGAGTCTTTT 100 443
HC661_RS17110 NONE
HC661_RS17105 NONE
HC661_RS17100 3503684 .. 3503707 -  -4.6  -5.52384   CCCTGATGAAAAAAA          CTGCCTGCTGT ATA AGAG-AGGCAG          TTTTATCATTTATGG  86 35
        alsS 3499327 .. 3499350 -  -2.4  -2.72144   TCACTCCTTTTAAAT          TGGGCTGTTT TAGA AAACAGGTCA           TGGTGCGCAGAGTGC  40 40
        budA 3498500 .. 3498527 -  -4.9  -5.30616   TCAGCCAAATAAAAA        GAAAGCCCC CGAGAAAAAT GGAGCTTTC         TTTTTTAATTTATTC  83 35
HC661_RS17075 3497794 .. 3497822 - -11.1  -4.48263   GACATAATAGCAAAA        CGGATTTCGCA AATTCAG CGCGAAATCCG        TTTTTTCTTTCTTGG  91 113
        pgsB NONE
        pgsC NONE
HC661_RS17010 NONE
HC661_RS17005 3483985 .. 3484005 - -11.2  -5.74122   GAGCACACAAAAAAA            GAATGCCC GTTAT GGGCATTC            TTTACTGGATTCGGA 100 74
HC661_RS17000 3482639 .. 3482663 - -17.3  -5.46706   ACGGTAAAAGAAAAA          GACGTCAGAGA CAC TCTCTGACGTC          TTTTTTTACGGAAGC 100 31
HC661_RS16980 3478123 .. 3478137 -  -2.8   -2.8032   TAAAACTGAATATTA               CGGA TGAACTG TCCG               CCGATTTGATTCTGA  42 8
HC661_RS16975 3476314 .. 3476327 -  -3.9  -4.60041   ATGTAGCGGTAAAAA               CAAAA GGAC TTTTG                TCAGAGGATCAATAT  68 311
        manA 3471719 .. 3471742 - -12.6  -5.95539   TTCCAAATAAAAAAA          CTTAATCCCA GAGC TGGGATTAAG           TTTGGTTTTATATAT 100 33
        tagD 3466130 .. 3466159 - -15.2  -3.47345   AACCTTATATTACAA       GAAGTACTCCCT ATCCGG AGGGAGTACTTC        TTTATCATCTGTATA 100 55
HC661_RS16930 NONE
HC661_RS16925 3462249 .. 3462274 -  -7.1  -5.28481   CACTTAAGCAAAAAA         GCATAA-TTAAC GTG GTTAAATTATGC         TTTTTTGCACCTATT  90 40
HC661_RS16920 NONE
        tagH 3459669 .. 3459702 - -15.5  -3.20367   GAAGAAGCTGACGAA     TAGAAAAAGCTGCCG AATC CGGCAGCTTTTTTTA      TGTGATCTTTACTTT 100 34
        wecB 3457386 .. 3457424 - -16.4    -3.671   AAAGAAAGCCTGAAA   TAATAAAAAAACTCTGCA TGA TGCAGAGTTTTTTTATTC   TGTAAAAGGCTGCGG 100 20
HC661_RS16895 NONE
HC661_RS16890 NONE
HC661_RS16885 3452273 .. 3452294 - -10.9  -6.20267   TGAAAAATAAAAAAA           CAGACCGAT ATGA ACCGGTCTG            TTTCCATCAAAAAAT 100 40
HC661_RS16880 NONE
HC661_RS16875 NONE
HC661_RS16870 NONE
HC661_RS16865 3447364 .. 3447387 - -11.7  -4.08064   AACCCCTTTCCAAAA          CCGGCAGCC GAGCCG GGCTGCCGA           GAGCCTGAAGACAAA  91 48
HC661_RS16855 NONE
HC661_RS16850 NONE
HC661_RS16845 3443166 .. 3443194 -  -7.3  -5.38497   ACGCAAATCAAAAAA        TGCGCTTTCCCTT TTA ATGGGATTGCGCA        TTTTTCAATATACCC  93 10
HC661_RS16840 3441943 .. 3441964 -  -9.5  -5.30189   GAGAATAGCAAAAAA           GCAGACCAT TCGC ATGATCTGC            TCTTTTTAATTTTTC 100 31
        degS NONE
        degU 3437827 .. 3437848 - -10.2  -5.42259   GCAGCTGTAAAAAAA           GACTTGCC ATAACA GGCAAGTC            TTCTCACACATGACT 100 39
HC661_RS16815 3436887 .. 3436908 -  -5.1  -5.95946   TTAATAATAAAAAAA           TCTCCGCCC TTGA AAACGGAGA            TTTTCACTTAGTTTT 100 33
HC661_RS16805 NONE
HC661_RS16800 NONE
        flgM NONE
HC661_RS16785 NONE
        flgK NONE
        flgL 3430547 .. 3430569 -  -4.1  -5.52986   ATTTTAGTAAAAAAA          GCGATCTCCC TGGT GTGAG-TCGC           TTTTTTATATATTGA  85 56
HC661_RS16770 NONE
        fliW NONE
        csrA 3429258 .. 3429278 -  -6.9  -6.09196   TTGAAAATAAAAAAA            TCCTCAC TTTTTTT GTGAGGA            TAAGTTAAGTAATAA 100 8
HC661_RS16755 3428087 .. 3428106 -   -10  -6.32017   AAGAAATAAAAAAAA            GACCCTGG AGAA CCAGGATC             TTTCCGTCATTAACC 100 35
HC661_RS16750 NONE
        fliS NONE
        fliT NONE
HC661_RS16735 3425172 .. 3425193 - -12.3  -4.20084   AGGACGCAGGCAAAA           GACCTGCCG CTTG CAGCAGGTC            TAGTGAAGAACATAC 100 25
        raiA 3424400 .. 3424421 - -12.3   -5.1104   AAAGATAGAGAAAAA           CCTTCCGCG CGTT CACGGAAGG            CTGGATGGGTTTATT 100 36
        secA 3421688 .. 3421714 -  -4.2  -2.83772   ACCTCATTAAAAGAT         CCGGGGCGCCAT AAG ACGCAGACCCGG         TCATGTTCGCTTCAT  46 51
        prfB 3420532 .. 3420555 - -11.8  -5.66684   GAACGGATAAAAAAA          CACACCTTGCC AAA GGCA-GGTGTG          TTCCCGGATTATGAC 100 34
HC661_RS16715 NONE
HC661_RS16710 3419139 .. 3419161 -  -8.4  -5.04385   CAGACCGTGAAAAAA           CCTTGCCCCT ATA ACAGGCAAGG           TTTTTCTGTTATTTT  90 34
        ftsE NONE
HC661_RS16700 3417353 .. 3417373 - -11.9   -5.5943   AAACCATTAAAAAAA            GCCAGTCTA TAT CAGACTGGC            TTTTGTATTTATACA 100 34
HC661_RS16690 3414333 .. 3414353 -  -6.1  -4.00842   ATGACAAAAGAAACA            GGAGACG AAAAAAA CGCCTCC            TCTTCATTTATTTTA  69 33
HC661_RS16685 NONE
HC661_RS16680 3412261 .. 3412299 - -20.8  -4.15565   TTTATTATTTCAAAA   TAAAACAGCTAAGAAAAT ATA ATTTTCTTAGCTGTTTTA   CTTTCTAACTGATTT 100 96
HC661_RS16675 3411673 .. 3411683 -  -2.6  -3.36492   GTTTTAATTTCATAA                 TATA AAT TATA                 AAAAAAATGAACAAA  46 64
HC661_RS16665 NONE
HC661_RS16660 NONE
HC661_RS16655 NONE
HC661_RS16650 NONE
HC661_RS16645 NONE
HC661_RS16640 3376357 .. 3376388 -  -2.9  -5.40072   CCGGCCGTAAAAAAA      GCCAGGCCGCCG TGTTGTTAG CGGCA-CCAGGC      TTTTTATATGTGATT  78 455
HC661_RS16620 3371107 .. 3371131 - -11.6  -5.24129   TTTTTGTATAAAAAA          CCTGCTTTTA TGGCG TAAAAGCAGG          CATTCTATTTCATAT 100 49
        uvrB NONE
        uvrA 3366071 .. 3366098 -   -15  -3.66556   AAGCCTGTAACACAA        CAGCCCAAAACC GGTG AGTTTTGGGCTG         TTTTTATTGATCTAT 100 40
HC661_RS16600 NONE
HC661_RS16595 NONE
HC661_RS16590 NONE
HC661_RS16585 3363596 .. 3363614 -  -8.1  -5.43414   ATCACATATAAAAAA             GCTGCCC TCTCG GGACAGC             TCGTTTTTTACCTTT  93 33
HC661_RS16580 3359608 .. 3359645 - -20.8  -5.71712   TGTTACAGAAAAAAA   CCTGCTGACCGTCAGA TTTTCT TCTGACGATCAGCAGG    CTGTATGTTTTCGTT 100 39
HC661_RS16575 3358785 .. 3358812 - -14.3  -4.06502   CAGGGTGAAATGAAA        CATCTCCAACC GTTACG GGTTGGAGATG         TTTTTTTGATCTGCC 100 140
HC661_RS16555 NONE
HC661_RS16550 NONE
        ppaX NONE
HC661_RS16540 3352984 .. 3353007 - -10.2  -5.97575   AAGTCATAAAAAAAA          CCCCGCTGAC GTTA ATCTGCGGGG           TTTTCCATTCGTTTT 100 13
HC661_RS16530 NONE
HC661_RS16525 NONE
        hisD NONE
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
HC661_RS16495 3345571 .. 3345592 - -14.5  -4.84527   TTGACAGATTAAAAA           CCTCACGGA TCTC TCCGTGAGG            TTTGTTTTACTCAGA 100 32
HC661_RS16490 3343573 .. 3343601 - -13.4  -4.07687   ATTCCGGCTGCAAAA        TAAAAAGCAGCT TTTTC AGCTGCTTTTTA        TTCATAAAGTCTTGC 100 42
HC661_RS16485 3342920 .. 3342934 -  -2.8  -3.33696   TCTTCTTTTAATGAA               TCGACA TGA TGTCTA               TTAACCGTCTTATTT  46 3
HC661_RS16480 NONE
HC661_RS16475 3341065 .. 3341075 -  -3.2  -2.82635   ACCGTCAGTAGTATA                 CCAT AAA ACGG                 TTTCACCTCAATAGT  44 90
HC661_RS16470 3339539 .. 3339570 -  -6.7  -5.60993   TTTCTGATAAAAAAA      GAACCGACTCTTT ATATAG AAAGAATCGGTTT       TATTCTAATATATCG 100 25
HC661_RS16465 3337727 .. 3337749 -  -7.7  -4.84602   ATACAAATAAAGAAA           GAGCCTTCC GGGAT AGAAGGCCC           TTGTCTTATTCATTA  86 38
        trxB 3336461 .. 3336486 -    -9  -5.82388   AAATCGCAAAAAAAA         GGGCACGGAT ACTGGA ATCCGTGCCA          AAGTGTATTCATTAA 100 144
HC661_RS16455 NONE
        rapZ NONE
HC661_RS16445 NONE
        whiA NONE
HC661_RS16435 NONE
HC661_RS16430 3331924 .. 3331943 -  -9.2  -5.46276   AACACATACAAAAAA            CGGCTTCC CTGC GGAGGCCG             TTTTTTTTTGCAGAG  95 53
HC661_RS16410 3329361 .. 3329376 -  -3.2  -2.71924   TATCTGCCGGTAAAT              TGCATC GTCA GCTGCA               TCCTCCTTTGACTGT  43 17
HC661_RS16405 3327734 .. 3327767 - -11.8  -5.41941   GAAACCAAATAAAAA     CACGGCCTGTCC GCTTTTTCAT GGACAGGCCGTA      TCTGAATTTTATCCC 100 34
HC661_RS16395 3326502 .. 3326528 - -14.6  -4.24002   CTGCAAACCGCAAAA         CATCCATCTCCT CTG AGGAAATGGATG         TTCTTCTTTCAACCC 100 216
HC661_RS16380 3322859 .. 3322885 - -12.4    -5.055   GTAATGCCCAAAAAA         CCTGCAAGAG CTGATGT CTCTTGCAGG         TTTTTTTATGCTTTA 100 31
HC661_RS16365 NONE
HC661_RS16360 3317781 .. 3317816 - -13.4  -3.45054   TTTGATAATGCACAA    CAGGATTATGCAGCGT CCTC ATGCAGCATAATCCTG     CATCGTTTACCGGCA  95 130
HC661_RS16355 3317580 .. 3317604 - -14.4  -6.14618   GATAAAATAAAAAAA          CCTCGCAGAT TTATC ATCTGCGAGG          TTTTTCCTATCGTCT 100 50
HC661_RS16340 NONE
HC661_RS16335 3314948 .. 3314978 -  -9.7   -5.4505   GTGTTCAACAAAAAA       GACAAGGGCGGCA CATGC CGCAACCCTTGTC       TTTTTCATTAAGCTC 100 69
HC661_RS16330 NONE
HC661_RS16325 3313813 .. 3313830 -  -9.8  -5.43487   AAAGGATACAAAAAA             CCCGGC CAAGCT GCCGGG              TTTTTTCTCTTATTT 100 35
HC661_RS16315 3312501 .. 3312513 -  -3.3  -2.99246   GAAAAATAATAGAAT                CGGGT AAA AACCG                CCGTTACCGGGTTTT  45 29
HC661_RS16310 3311873 .. 3311898 - -14.8  -5.37345   TTCAAGCATAAAAAA         CGCCAAGGGA GCCGGT TCCCTTGGCG          TTTCGTTTTCATCTC 100 34
HC661_RS16295 NONE
HC661_RS16290 3308171 .. 3308189 -  -9.5  -3.10894   ACGACCAGCATCTAA             GGCAGCG GAAAA CGCCGCC             CACAGCAGAGCCGAG  73 82
HC661_RS16285 NONE
HC661_RS16280 NONE
HC661_RS16275 NONE
HC661_RS16270 NONE
HC661_RS16265 NONE
HC661_RS16260 NONE
HC661_RS16255 3299832 .. 3299857 -  -2.3  -3.31792   CGATCACGCTCACAA         GCGGCGCGGTC ATTG GGCATCACCGC          TGATTTTCGAGCGCA  45 9
HC661_RS16250 NONE
HC661_RS16245 NONE
HC661_RS16240 NONE
HC661_RS16235 3295743 .. 3295755 -  -4.7   -5.1963   CCGAATCAATAAAAA                CGGGC TCA GCCTG                CTCATACACAATCGG  80 317
HC661_RS16225 3293915 .. 3293939 - -12.2  -5.00611   GAGAAACAAAATAAA          CCTTCCGCTC ATTCA AAGCGGAAGG          TTTTCCTTCGTGCCG 100 13
        rpoN 3292279 .. 3292304 - -11.8  -3.42503   CCGTAACACGGAGAA         CCTCCCCGGG GTTTGG CTCGGGGAGG          TTTCAGCTGTACCGT  86 28
HC661_RS16205 NONE
HC661_RS16200 3288420 .. 3288439 -  -6.4  -5.41746   AAGGGTGCAAAAAAA            GAGAAGCC TGAA AGCTTCCC             ATGCTGCTCTACATC  91 34
HC661_RS16195 NONE
HC661_RS16190 NONE
HC661_RS16185 3285339 .. 3285365 - -15.2  -4.96848   GCGTTTATATAAAAA         CAAACCCCGGCC GTA AACCGGGGTTTG         TTTTTTTATCGGTCA 100 31
HC661_RS16165 NONE
HC661_RS16160 NONE
HC661_RS16155 3278366 .. 3278383 -  -7.7  -5.26875   GCGCTAAGCAAAAAA             GACCACC ATAA AGTGGTC              TTTTTAAGTTGACTT  91 29
HC661_RS16145 3274681 .. 3274736 -    -7  -5.60993   GGCCGCAGAAAAAAA GGCCGTTCATTAAAAAAACTCTTGCC GCGG GGCAAGAGTTTTTTTATTTATTGACG TCTCCCTTTCACGAG 100 17
HC661_RS16135 NONE
HC661_RS16130 3271631 .. 3271662 - -13.8  -4.86001   ATTATTGCACAAAAA      CAGGCAGCACACTA TATA TTATGTGCTGCCTG       TTTTTCATCTTTTTA 100 30
HC661_RS16125 3270235 .. 3270260 - -16.3  -5.06816   ATCGGCGAATAAAAA         TGGGCAGATAC AATT GTATCTGCCCA          TCAGTCATTAAATTG 100 26
HC661_RS16115 3267453 .. 3267478 - -14.1  -2.92425   AATGAAGGTGACAGA         CAAAAGCCCGC CGGA GCGGACTTTTG          TCGTAAAACGCTTTC  95 39
        cggR NONE
         gap 3265060 .. 3265084 - -12.2  -4.65895   GTTCTCATGGAAAAA          GGGAAAGGGA GTCCG TCCCCTTCCC          TTGTCCGCTTTCATT  95 93
HC661_RS16100 NONE
HC661_RS16095 NONE
        gpmI NONE
         eno 3259979 .. 3260001 - -17.8  -5.67063   GGGAGCATAAAAAAA           CGACGGGAGA ATA TCTCCCGTCG           TCCATTCCATTACTT 100 35
HC661_RS16080 3258543 .. 3258556 -  -8.1  -6.12328   ACAATATAAAAAAAA               CAGGC CGAA GCCTG                TTTTTTTATTCTTTC 100 31
HC661_RS16075 NONE
HC661_RS16070 NONE
HC661_RS16065 NONE
HC661_RS16060 NONE
HC661_RS16055 NONE
HC661_RS16050 NONE
HC661_RS16045 NONE
HC661_RS16040 NONE
HC661_RS16035 3249194 .. 3249217 - -12.4   -4.9218   GATTTATGATAAAAA          GGGCGCCG GCTGACAT CGGCGCCC           CTTCGTTTACCATTC 100 39
HC661_RS16025 3246773 .. 3246798 -   -14  -3.99805   TTTTAAAAACGGAAA         CCCCCGCCGCC TGATT GGCG-CGGGGG         TTTTTTTATTGAATG 100 31
HC661_RS16015 3244946 .. 3244973 - -12.7  -5.63645   CGAAAATAGAAAAAA        GCAGCACCCGA AGATAA CCGGGCGCTGC         TTTTTTAAGTCAGGA 100 35
HC661_RS16005 NONE
HC661_RS16000 NONE
HC661_RS15995 NONE
       opuCD 3240684 .. 3240702 -  -8.1  -5.88565   GCCATAAGAAAAAAA             CGCCCTG ACCCG CAAGGCG             TTTTTTTCATGCCGC 100 32
HC661_RS15980 3238701 .. 3238713 -  -4.1   -2.5655   CTGATTCATATCAAT                TGAAG CCT CCTCA                TGACATCACCGCGAG  44 23
HC661_RS15975 NONE
HC661_RS15970 NONE
HC661_RS15965 3236384 .. 3236406 -  -8.5   -6.0458   AGAAATCAAAAAAAA           GCATCCTTC ACGCG GAAGAATGC           TTTTTTTCATGAGGC 100 32
HC661_RS15960 NONE
HC661_RS15955 3234854 .. 3234865 -  -5.8  -3.10545   TATATCGTAAAAGCA                CGGT CATG ACCG                 GTTTCCCCCTTTTGA  54 17
HC661_RS15950 NONE
HC661_RS15945 3233311 .. 3233329 -  -8.8  -3.07994   GGCAATGGCATTTAA             GGCGACAC ATA ATGCCGCC             ACCCCCATCGTGCTC  67 99
HC661_RS15935 3232607 .. 3232619 -  -5.5  -4.94262   TACATGAAAAACAAA                GGCAT GTC ACGCC                GTATCGGTGCACATC  79 79
        secG 3232282 .. 3232302 -  -7.6  -5.29445   TCTCAACAAGAAAAA            GGCCTGAT ATTAA ATCAGACC            TTATACAAACATTGC  90 42
HC661_RS15925 NONE
         rnr 3229072 .. 3229098 - -10.2  -4.41348   GGCTTGCGAAAGAAA         GCAAACAGAGCA TTT TGCCCCATTTGC         TTTTCGCATTTACTT  90 35
        smpB 3228460 .. 3228470 -    -4  -3.03124   TTTGATGTGTGAACA                 GTAT AGC ATAC                 GGCAGTTATCACATC  47 53
        ssrA 3227926 .. 3227955 - -17.9  -5.14563   TTCGGCATGAAAAAA       CCGCAGTGCGGTC AAGT GACGGCACTGCGG        TTCCTCTGTTATGTA 100 38
HC661_RS15905 3227356 .. 3227366 -  -3.2  -2.75528   AGCTCCAAGACATCA                 TCAG CAT CCGA                 ACCGAATGCCTTTTG  44 258
HC661_RS15895 3226315 .. 3226331 - -11.5  -5.52384   TCCGCATTAAAAAAA              CCCCCGC TTT ACGGGGG              TTTTTGTACGTTCAT 100 42
HC661_RS15885 NONE
HC661_RS15880 NONE
HC661_RS15875 NONE
HC661_RS15870 NONE
HC661_RS15865 NONE
HC661_RS15860 NONE
HC661_RS15855 NONE
HC661_RS15850 NONE
HC661_RS15845 3218200 .. 3218220 -  -9.8  -4.64598   CAAGCAGCGGAAAAA            GCAGAAAC ATTTA GTTTCTGC            TCAAAATCGGATTTG  91 15
HC661_RS15825 3214493 .. 3214522 -    -5  -4.11748   TCGACAAAGAAAAGA       CCGATTTTGACC ATGTTA AGCCTAAATCGG        CTGTTTCATTTCAGA  63 134
HC661_RS15820 3213606 .. 3213629 - -13.8  -4.87626   CTTTAATATGAAAAA          CCTCCCAGCC GTAC GGCGGGGAGG           TTTTTTTAAGATCAG 100 37
        csoR 3212082 .. 3212092 -  -4.6  -2.79796   CTTTATGTTACCATA                 CCCC TGT AGGG                 TATTTCAAAACATTT  48 45
        copZ 3211801 .. 3211823 -  -5.5  -5.20781   TATGATAAAAGAAAA          CCGCGCC-CG TTTC CGCAGCGCGA           TAAATCCTATACGAC  85 32
        cadA 3209304 .. 3209331 - -11.4  -5.45652   AGTGTCAATAAAAAA        GACAAAACAGGC ATCA GCCCATTTTGTC         TTTTTTCACCTTCTG 100 11
        cadA 3206970 .. 3206995 -  -6.2  -5.79595   TTTTAAAATAAAAAA        GAAGCGGATGCC GGAT GGC--CCGCTTC         TCTATTTTACCAAGA 100 86
HC661_RS15790 3206247 .. 3206267 -  -3.3  -3.14404   AGAGCAATCACCCAA            GAAGCATAT AAA ATACGATTC            TATTTTTCATTTTTC  46 25
HC661_RS15785 3205834 .. 3205857 - -13.2  -5.23765   CAAATAATAGAAAAA          GAGCC-GCTCC CAT GGAGCAGGCTC          TTTATTTTGCCGTGC 100 27
HC661_RS15775 3204168 .. 3204189 -  -8.8  -5.81412   GTTATGCAAAAAAAA           CCGATTTC GTTTGT GAAATCGG            TTTTTTACTGATCTA 100 30
HC661_RS15770 3201683 .. 3201705 - -13.5  -4.99861   TACTAATGATAAAAA           GCCCTTTGC ACTTG GCAAAGGGC           TTACACGAATAAGCC 100 26
HC661_RS15765 NONE
        cysI 3197843 .. 3197865 -   -15  -5.61881   CCGGAAAAAGAAAAA           GCCTGTTTTC TCT GAAAACAGGC           TTTTTCGCAAGCTGC 100 140
HC661_RS15755 3195590 .. 3195611 -  -8.7  -5.15969   CCGTAATCTAAAAAA           GTCCGGC GAACAGAT GCCGGAC            TTTTTTTATTCATCT  90 31
HC661_RS15745 3194019 .. 3194036 -  -9.1  -5.30616   TTATGTAAAGAAAAA             CAGCCCC GTAA AGGGCTG              TTTTTTCTTAGAACA  93 33
HC661_RS15705 3186311 .. 3186331 -  -9.7  -5.87996   TAAGCAATAAAAAAA            TCCCTCCGT TAT ATGGAGGGA            TTTTTCATGTTTCAT 100 30
        sspJ 3183567 .. 3183590 -   -11  -4.26622   AAATTAGATGGAAAA          CGGATAGAGC GTTC GCCCTACCCG           TCTTATATGGTCAGC  90 36
HC661_RS15685 3181745 .. 3181768 -   -14  -5.95539   CCGCAAACAAAAAAA          GACATCTCAC AGAC GTGAGATGTC           TTTTTGTCATACCGA 100 32
HC661_RS15670 NONE
HC661_RS15665 NONE
HC661_RS15660 3176574 .. 3176595 -    -8   -5.7946   GGCGCAATAAAAAAA           CGCAG-GCC GGAAT GGCTCTGCG           TTTTTTTTCATCATA 100 36
HC661_RS15630 NONE
HC661_RS15625 3171008 .. 3171022 -  -5.8  -3.27525   GGCGTCCAAACTTAA               TCTTTT TTA AAAAGA               ATCGTAATCACCGTT  56 7
HC661_RS15620 3170020 .. 3170055 - -10.4  -5.48063   ATTTAACACAAAAAA    GCCC-GGCACAATGGGA ACT TCCCCATATGCCAGGGC    TTTTTTTTACATCAT 100 32
HC661_RS15610 NONE
HC661_RS15605 NONE
HC661_RS15600 NONE
HC661_RS15595 3165256 .. 3165279 - -12.4  -5.61596   ATCTCTATAAAAAAA          CAGCCGGCTT GCTG ATGCCGGCTG           AACAAAACATTATTC 100 35
HC661_RS15590 3163816 .. 3163842 - -12.3  -5.60993   CTTCGCATAAAAAAA        CGCCGCTGCACC GGAC GGCGCAG-GGCG         TTTCACGAAAAATCT 100 39
HC661_RS15585 NONE
HC661_RS15580 3162586 .. 3162599 -  -5.2  -3.12327   TGCGTATAGGGAAGA               GGCG TAAACG CGCC                GATCTTCCCTTGTGC  53 44
HC661_RS15575 NONE
HC661_RS15570 NONE
HC661_RS15565 NONE
HC661_RS15560 3159139 .. 3159149 -  -6.8  -4.16016   GGATTTCGGAACAAA                 GGGA ATG TCCC                 AATGACCCTGTCTTC  73 72
HC661_RS15540 NONE
        fumC 3153737 .. 3153763 - -15.2  -3.36327   GCAGTTTATTTAGAA         GAACGGCCGCAA TGA CTGCAGCCGTTC         TTTCTTTTTATGCTT 100 33
HC661_RS15525 3152233 .. 3152245 -  -5.5  -4.19735   TTCTCGAAAATCAAA                TCCGC TAT GCAGA                AACGGCGATTCACAT  66 296
HC661_RS15510 3148784 .. 3148808 - -10.1  -5.39221   AGAATAACGAAAAAA          GCTGAACCT CAGTTGC AGGTTCAGC          TTTTTTTATGCGTTC 100 39
HC661_RS15495 3145423 .. 3145447 -  -6.4  -5.68438   TCATTAAACAAAAAA         GAACCGGAGCG GTAA CACTCCGGC-C          GGTTCATCTCAAGAT  95 43
HC661_RS15490 NONE
HC661_RS15485 NONE
HC661_RS15480 3143624 .. 3143654 - -11.2  -5.52384   TTTTCAGCAAAAAAA       GCTTCCGGCACC TCTCTTT GATGCCGAAAGC       TTTTTTATTGTTTTT 100 30
HC661_RS15465 3140558 .. 3140576 - -11.6  -5.47159   TTTAACAAAGAAAAA             TCCCGCGG ATG CCGCGGGG             TTTTTTTATATCATC 100 105
HC661_RS15440 3136690 .. 3136709 -  -4.3  -4.36863   GCAATATAAAAAAGA            CAACATG GAATAA CATGCTG             CGGCTGCTTTTTGGA  66 48
HC661_RS15430 NONE
HC661_RS15425 NONE
HC661_RS15420 3130979 .. 3130999 - -10.4  -4.72272   TTGCTTCATGAAAAA            GCGCCCCT GATGA AGGAGCGC            TTTCAGCATGTGATC  93 39
HC661_RS15415 NONE
        gcvH NONE
HC661_RS15405 3129785 .. 3129803 -   -11  -4.46215   CAGATTGAAAAAGAA             GGCAGTGA AAT TCACCGCC             AACTGTTAACACCAG  91 31
HC661_RS15400 NONE
HC661_RS15395 NONE
HC661_RS15390 3128341 .. 3128368 - -11.4  -5.07652   CTCCGCAAAAGAAAA        GCCTTTCTGC AAAAATGA GCAGAAAGGC         TTATTGAAAAAGGCC  95 261
HC661_RS15385 NONE
HC661_RS15380 NONE
HC661_RS15375 3125736 .. 3125756 - -16.9  -5.46629   AATACCCGAAAAAAA            CCCCGGATG GAT CATCCGGGG            TTTTTCGCTTTATTC 100 35
HC661_RS15370 NONE
HC661_RS15365 3124930 .. 3124945 -  -8.2  -5.19879   TTTGAAACAGAAAAA              GGGCGG AAAT CCACCC               TTTTTTACTGACCGA  91 30
        sufC NONE
        sufD NONE
        sufS NONE
        sufU NONE
        sufB 3119561 .. 3119578 - -14.1  -6.17669   AATAAAACAAAAAAA             CCCCGCC ATAT GGCGGGG              TTTTACTATTAACCG 100 34
HC661_RS15325 NONE
HC661_RS15320 NONE
HC661_RS15315 3115718 .. 3115737 - -11.4  -5.13648   TAAACATAAAGAAAA            CCGGAGCC CTTA AGCTCCGG             TTTTTCTTATTTATA  95 32
HC661_RS15295 NONE
HC661_RS15290 3111490 .. 3111505 -    -4  -3.14132   TTTTCGGCTGACCAA              GGAAAT CCTC ATCTCC               TTTCTCCAAAGAAAT  48 46
HC661_RS15285 NONE
HC661_RS15280 NONE
HC661_RS15275 3108617 .. 3108646 -  -5.1  -3.37487   TGACATTTTGAAACA       GCACTATCAGGTGG TGC CCACCC-ATAATAC       GAAGCTGTTAAATGT  54 234
        ugpC 3106812 .. 3106835 -  -9.6  -3.48822   CATAAGAAGTGATAA          GGGAGCCCCGA TCA TCAG-GCTCCC          TTTTTCAATATACGG  77 30
        allC NONE
HC661_RS15250 NONE
HC661_RS15245 3101867 .. 3101886 -   -15  -4.85129   ATGAGATAGCAAAAA            GCCTCCGG ATAC CCGGAGGC             TTTTGATTCTATCCT 100 34
HC661_RS15240 3100554 .. 3100564 -    -4  -4.68612   AAAGAAATCACAAAA                 TACA ATA TGTA                 CCTGATACTATTCAT  69 166
HC661_RS15235 3098852 .. 3098871 -  -8.6  -5.38497   ATCTAAACTAAAAAA            GCCTTTCC CGAA GAAAAGGC             GTAAGCTGTTCAAGT  95 295
HC661_RS15225 3095543 .. 3095566 - -15.4  -5.75599   CAAACGACAAAAAAA          GCCGATTCTC ATCA GAGAATCGGC           TCTTTTATTTCAGAA 100 13
HC661_RS15220 NONE
HC661_RS15215 NONE
HC661_RS15210 NONE
HC661_RS15205 3091878 .. 3091917 - -13.8  -5.10461   TCTAGGCAAGAAAAA  TCCCCCCTTACATATCACA ATG TATGCT-TGTAAGGGGGGA  CATAGTATTTTATTT 100 105
        yunB 3091077 .. 3091109 - -13.5  -4.35327   GCAGGAAAAAGTAAA      CACACAGCCGCCA GGAAAGA TTGCGGCTGTGTG      TTTTTATTTATCTTT 100 29
        lipA 3088961 .. 3088983 -  -7.8  -5.31275   CTCCATCACAAAAAA           CCCAAAAC CTGCGGC GTTTTGGG           TTTTTTCGGCTTATC  91 41
HC661_RS15185 NONE
HC661_RS15180 NONE
HC661_RS15175 3087215 .. 3087235 -   -14  -4.01227   AGAAATACAGAATAA            GGACGGCC GTCAT GGCCGTCC            CTTTTTTTATAGATG 100 32
        yutH 3085329 .. 3085343 -  -2.8  -3.37513   ACAGTCCAATACGAA               TCGCTT CCA AAGAGA               AACTCCACCTTTCTT  46 222
HC661_RS15160 NONE
HC661_RS15155 NONE
HC661_RS15150 3082017 .. 3082042 -  -9.7  -4.96501   CTCCAGAAAAAGAAA         GCGTCCTTCTC TGAT GGGAAGAACGC          TTTTTTATCATTATA  93 36
HC661_RS15145 3079942 .. 3079962 - -13.3  -4.54821   ATTTTAATCATAAAA            CCAGGCTGC ATG ACAGCCTGG            TTTTTTATTTTTTAC 100 37
HC661_RS15135 3079165 .. 3079186 - -14.5  -5.55769   GCTGATAAGAAAAAA           GCCGCTGAT TGCG ATCAGCGGC            CATTTTTAAGAGCCT 100 31
HC661_RS15125 3077561 .. 3077580 -  -7.8   -5.4505   GGGCGCAATAAAAAA            GAGACCCC GTTC GGAGCCTC             TGATTAAAACATCGG  93 29
HC661_RS15120 3076194 .. 3076225 - -20.4  -2.87132   CCCGTTTTTCATACA      TAAAAGCTCCCTGC ATAT GCAGGGAGCTTTTA       TCGTTTACTAAATAA 100 33
HC661_RS15115 NONE
HC661_RS15110 3074684 .. 3074714 - -15.6  -4.57341   AACCTCTTTGAAAAA       GGAAAACCCGCT TCTGTTG AGCGGGTTTTCC       TTTTATTAAACAGAT 100 125
HC661_RS15100 3072995 .. 3073018 -  -6.8  -5.39721   GCAGGATATAAAAAA          GGAGGATA TCGTCATG TATCCTCC           GGATGTATGATCGCC  93 13
HC661_RS15095 3072180 .. 3072196 -  -2.4  -3.64703   CTCTCCCGAGCTAAA              TTTTAT CCGCC ATAAAA              TAGTTTAAGAAAATA  49 4
HC661_RS15090 3071723 .. 3071753 -  -7.7  -2.87931   TGTATTTGGGAGAGA       GGCTCTTTTTGCA GCTTG TACAAAAAGAGCA       ATTATTTATTGATCG  62 44
HC661_RS15085 NONE
HC661_RS15080 NONE
HC661_RS15075 NONE
HC661_RS15070 3068546 .. 3068566 - -11.3  -5.88197   TCAAAGATAAAAAAA            TGACATTCA ATA TGAATGTCA            TTTTTTTATTAAATA 100 34
HC661_RS15060 3067143 .. 3067169 - -11.6  -5.57729   AAATAATACAAAAAA         GAGTCTGTGTCA TAC CGGCACAGACTC         TTTTTTATTTAAACA 100 30
HC661_RS15050 3064584 .. 3064607 - -15.4  -3.68435   TTTTTTAAAAGAAGA          GAAAACCCGC GGCC GCGGGTTTTC           AGAAGAATTTAAACT 100 24
HC661_RS15045 3064245 .. 3064282 -  -4.1  -2.77222   ACTAATCACAAACAT   CCACCCCCTACAGCAC TTTCAGT GTACC-TCGGGGGCGG   TAAAAAAGTCAACGT  46 50
HC661_RS15040 3063895 .. 3063914 -  -7.2  -5.60993   CGCGGCACAAAAAAA            GCTTTCTC GAAT AAGAAAGC             GGCTTAAAACATTTG 100 29
HC661_RS15035 3063151 .. 3063172 - -14.5  -5.08824   TCTTTATGTAAAAAA           CGCTTCAGC GGAT GCTGAAGCG            TTTTTATTCTTTTAC 100 29
HC661_RS15025 3061004 .. 3061025 -   -13  -5.37593   TTGGAAATCAAAAAA           CCCGCTGC ATCAAG GCAGCGGG            ATGCTGTTATCTTTC 100 32
HC661_RS15020 3059546 .. 3059565 - -10.7  -5.00895   CTCAGCATACAAAAA            GGCTCCC CTTTCC GGGAGCC             TTTTTTTACAGGACA  93 31
HC661_RS15010 3058187 .. 3058208 -  -8.1  -5.71712   TTTGATATAAAAAAA           GCACCTTAT TTCA ATAAGGTAC            CTAAGAACTATATAG 100 51
HC661_RS15005 3057098 .. 3057117 -  -3.7  -2.53894   ATTATCATTATCAAT            TATGATT CAAGAC AATCATA             TCCAAATCAAAACAC  44 97
HC661_RS15000 3056282 .. 3056292 -  -3.2  -2.78327   ATCAAACGCCTAAAG                 TAGC GCC GCCA                 TCAACGCATAAATCA  44 1
        dhbC NONE
HC661_RS14990 NONE
HC661_RS14985 NONE
HC661_RS14980 NONE
HC661_RS14975 3045054 .. 3045075 -   -13  -4.83169   ATGTCCGCATAAAAA           GCCTGCCG AAATAA CGGCAGGC            TTTTCTTATTACATT 100 34
HC661_RS14955 3041121 .. 3041152 -  -4.3    -4.128   ACCCTTACATAGAAA      GAGCGCCGTCTTC TTGATT GAATCAGGCGCTC       CGTTTCTTCATTCAT  61 45
HC661_RS14950 NONE
        essB NONE
        essC NONE
        esaA NONE
        essA 3031414 .. 3031429 -  -2.5  -3.81488   TTCCCGCAAACACAA              GCGAT CCGTTT ACCGC               TTTGCCTTTTCCTGC  53 19
HC661_RS14925 3030612 .. 3030631 -  -9.3  -5.72622   TGTACAAACAAAAAA            GAGCAGC GTAAAA GCTGCTC             TACAAAAATTCTTTG 100 25
HC661_RS14920 3029921 .. 3029936 -    -6  -4.19953   TATGTAAGCGGAAAA              GGCCGC ATGA GTGGCC               TAGACTGAGCTTCTT  71 25
HC661_RS14915 3029426 .. 3029436 -  -2.4  -3.65046   CTTTGATTTCAACAA                 GCGG TTT CCTC                 CTATTGTCATGTGAA  49 151
HC661_RS14910 3028249 .. 3028264 -  -3.2  -2.57463   AATCGGTCCCACAAT              TGCAGG CATA CCCACA               CCTCCGCTTTTCTTT  43 80
HC661_RS14905 3028011 .. 3028039 - -19.7  -5.34555   TTATACTACAAAAAA        GCGACAGCCTCCT AAA AGGAGGCTGTCAC        GCGTTAAACCAATCA 100 22
HC661_RS14900 NONE
HC661_RS14895 3027215 .. 3027234 -  -3.6  -3.17723   CCACTTGTAAGTGAA            TTGGCATT GTAA AATGACAA             ACGGTGTTTTGCCCT  46 42
HC661_RS14890 NONE
HC661_RS14885 3025084 .. 3025108 - -11.5  -5.22006   TTATCACAACAAAAA          GGCCTTTCC AGAGAAA GGAAAGGCC          GCTTTGTCTTCTATT 100 36
HC661_RS14880 3023579 .. 3023599 -  -5.3  -4.07568   CTGTCGGCGTCAAAA            GAGCTTGCG CGC CGCATTCTC            ACCGCAGCGCAATCA  64 191
HC661_RS14870 3022795 .. 3022810 -  -7.6  -5.97575   AATGCACAAAAAAAA              GACTTG TTTC CAAGTC               TTTTTAAGAAATTTT 100 29
HC661_RS14865 NONE
        comX 3021107 .. 3021130 -  -2.4  -5.25893   ATACATAGCAAAAAA          CAAATCAGAA TATA TGCTGATATG           CTGTCTTTCTTCAAA  73 482
HC661_RS14850 NONE
HC661_RS14845 3018091 .. 3018125 - -11.6  -4.61231   TCATATTTGTAAAAA     CAAACAGCCGGA CGATTCAGGGT TCCGGCTGTTTG     TTTATTTTGTTATAA  93 27
HC661_RS14805 3011828 .. 3011854 - -11.7   -4.9725   ATTGTGACACAAAAA        GAGTTCC-GCAC CCCG GTGCCGGAACTC         TTTTCATCTATATAC 100 29
HC661_RS14770 3003624 .. 3003651 - -17.2  -5.06414   CTGTCTTAACAAAAA        TGGCTAGCTTAC ACAG GTAAGCTAGCCA         TTATGCTATTATAAA 100 6
        kapD 2999093 .. 2999107 -  -4.2  -3.34398   TGCCCGGCTGAAAGA               TCAGCT TAC AGCGGA               CGGCTCAGAATGGGC  50 123
HC661_RS14730 2995811 .. 2995826 - -11.8   -5.8187   TATTCAATAAAAAAA              CCGGCG GAAC CGCCGG               TTTTTAAGGGGTGCA 100 29
HC661_RS14720 2994317 .. 2994340 -  -2.4  -4.18983   TCAGATAAATAAGAA          GTCTTCGT TTCCATTT ACGGAGAC           ACCACGATTCTTTTG  56 16
HC661_RS14715 2993083 .. 2993125 -  -2.7  -4.17417   TTAAGCACAGATAAA GGAGGGTATACTATGATTAC GAAG GCTTTC-TAGTATTCCCCCC TTTTATTTGGATGCG  57 61
        yugI 2992536 .. 2992559 -  -9.6  -5.90231   ATAAACATAAAAAAA          GCACCGAACA TACA TATCCGGTGC           TTTTTTTAATGATTA 100 38
HC661_RS14700 2990860 .. 2990882 -    -9  -5.80248   TAACACAGAAAAAAA           GGAGCTGCCA ATC CGGCCGCCCC           CTTTATGTTATTACA 100 36
HC661_RS14695 2989348 .. 2989390 - -13.6  -4.57353   TCTTAGTACACAAAA TGCATAAAAGGAGCGCTGAT TGA ATCAGCGCCCCTTTTTTAAA TTCGCGGCTCTTCAT 100 269
HC661_RS14680 2986234 .. 2986261 - -12.8  -5.02074   TCACGGTTTAAAAAA        GGCTGACCCGTCA TGC TGA-GGGCCAGCC        CTTTTTTTTATTTTT 100 33
HC661_RS14670 2985355 .. 2985382 -  -9.1   -4.9725   ATCGGTATACAAAAA        GAAGAGGGGCC GATGCT GACCCCTCCCC         TGTCATACCATGTGC 100 66
HC661_RS14655 NONE
HC661_RS14650 2983032 .. 2983053 - -12.3  -5.69379   ATATAAGCAAAAAAA           CCCCTACCG CAAA CGGTAAGGG            GCCACCTCCTTCGTG 100 41
HC661_RS14645 2981714 .. 2981736 -  -4.1  -5.60993   TTTTCCATAAAAAAA          GCCTCATTGC AAAA GCAG-GAGGC           TCAGAAATCAGTTTT  85 26
HC661_RS14640 2979965 .. 2979984 -  -8.6  -5.34555   GCAGATCACAAAAAA            CTTCAGCC TCGG GACTGAAG             TTTTTCACCATATAT  93 30
HC661_RS14635 NONE
HC661_RS14630 2978133 .. 2978161 - -10.4  -4.26327   CATGCATTAAAACAA        TCCCATCGTC TGTCATTGT GACGATGGGA        TGCGGAATGCTTTTC  89 285
HC661_RS14615 2975229 .. 2975254 - -15.5  -5.31275   TGTCACTATAAAAAA         GGACGCCTTCC ATCC GGAAAGCGTCC          TTTTTTACTAGTTGA 100 33
HC661_RS14610 2973071 .. 2973087 -  -3.7  -4.14739   TTACCTATCGTAAAA              TTAGTCT TTT AGACTTA              ATTAAGAGTTTATCT  61 27
HC661_RS14605 2970941 .. 2970963 -  -9.2  -6.11019   AAAAACTAAAAAAAA           CACCCAAACA GCA CATTTGGGTG           TTCTATGACCTATTA 100 38
HC661_RS14600 2968847 .. 2968862 -  -4.7  -4.74518   AATGAGGAAAAGAAA              CAGCT CGCTAC AGCTG               TTCTTCGTCTTCAGA  72 17
HC661_RS14595 2968236 .. 2968259 - -13.9   -5.1166   GATCAAAACTAAAAA          CATCCGCCC GGATTT GGGCGGATG           TTTTTTATTTGGACG 100 30
HC661_RS14585 2965847 .. 2965876 -  -7.9  -4.43844   TCATCATTTACAAAA       GAGAAGCTCTCCT CTGA AGGAAAGCCTGTC        TTATAATAAATATCA  80 55
HC661_RS14580 2964958 .. 2964978 -  -4.6   -5.0916   TTTCGAATATAAAAA            GAAGACCC TCCGG GGGGCCTC            TTCGTTTATCGCACG  76 31
HC661_RS14575 2964752 .. 2964772 -  -8.4  -6.28401   GAAAAAACAAAAAAA            CCCTTATT TATAG AATAAGGG            TTTAAAGGTATGGAG 100 34
HC661_RS14570 2964319 .. 2964342 - -13.9   -4.0641   CGGCATTGACAGAAA          GAGCCCCTC ATTGAA GAGGGGCTC           TTGATCATCACGGTC 100 33
        hmpA 2962228 .. 2962246 - -13.2  -5.63517   TGTGCAAATAAAAAA             GACTCCTC TTT GAGGAGTC             TTTTTTGTTATGCCA 100 33
HC661_RS14555 2961238 .. 2961254 - -10.8   -5.1848   AAGGAATGTAAAAAA              GCCGGC GGGCT GCCGGC              TTTTTTTGATGCTTA 100 38
        betB NONE
        gbsB 2956217 .. 2956239 -   -12  -5.03715   ATTATCCTTAAAAAA           CCCCGCTC TGTAAAG GAGCGGGG           TTCATTTATTATACC 100 34
HC661_RS14525 2955580 .. 2955608 - -16.9  -5.74086   AAATCAAACAAAAAA        TCGAAAAGGTCTG AGT CAGACCTTCTCGA        TTTTTTTCTTGGCGC 100 12
HC661_RS14515 NONE
HC661_RS14510 2952851 .. 2952873 - -14.9  -3.89215   GCGGACAAACTGAAA           CAGCAGGCG GTTTA CGCCTGCTG           TTTTTTTATTCCGGG 100 31
HC661_RS14500 2949928 .. 2949938 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  70 235
HC661_RS14495 2946940 .. 2946957 -  -8.5  -2.96873   ATCGCCACCAAACCA             TTGAGAG TGTT CTCTCAA              AACTAGATAACAGTA  67 52
         rrf 2946803 .. 2946818 -  -6.2  -2.88579   CTAATCCTCCATATA              TTACAC TTAC GTGTAA               TAGCTTGGCGGCGTC  55 28
HC661_RS14485 NONE
HC661_RS14480 2946594 .. 2946606 -  -3.5  -2.51872   CTTATTACAAGAGAC                TTATA TAG TATAA                CATATAAAGGTGGTG  42 36
HC661_RS14475 2946502 .. 2946515 -  -6.7  -5.07486   CATCCGCAAGAAAAA               CATGG TGAG CCATG                AAGGACTCGAACCTT  85 14
HC661_RS14470 2946391 .. 2946420 -  -4.9  -3.09516   TGTTCTACCACTGAA       CTACTTCCGCGTT TGGC AATGCGGATGAAG        GGACTTGAACCCCCA  51 15
HC661_RS14465 NONE
HC661_RS14460 2946220 .. 2946231 -  -2.2   -3.9461   CGGGCGCAACAATAA                GTGCC GAG GGC-C                GGACTTGAACCGGCA  51 15
HC661_RS14455 NONE
HC661_RS14450 NONE
HC661_RS14445 NONE
HC661_RS14440 NONE
HC661_RS14435 NONE
HC661_RS14430 NONE
HC661_RS14425 NONE
HC661_RS14420 NONE
HC661_RS14415 NONE
HC661_RS14410 NONE
HC661_RS14405 NONE
HC661_RS14400 NONE
HC661_RS14395 NONE
HC661_RS14390 NONE
HC661_RS14385 2944872 .. 2944890 - -11.8  -5.56673   ACGCATAATAAAAAA             CCTTGCAT AGT ATGCAAGG             TTTTTTTAATGACCC 100 32
HC661_RS14370 NONE
        menD NONE
        menH NONE
        menB 2938353 .. 2938379 -  -9.4  -5.07652   TTTTTGAAAAGAAAA         CAGCTTGGACCA GAG CGGCTCAAGCTG         TTTCGTAGTGTCATC  93 44
HC661_RS14350 NONE
        menC 2935634 .. 2935650 - -13.7  -5.52384   CGCCTATTAAAAAAA              CCGGCTG ATA CAGCCGG              TTCAAACGGGGGAAG 100 110
HC661_RS14325 2932272 .. 2932299 - -13.6  -4.17132   AAAGTGCTCAATAAA        TAAGACAAACCC CATT GGGCTTGTCTTA         TTTTCCCATATTGTA 100 23
HC661_RS14320 2931493 .. 2931510 -  -5.5  -3.19668   CAGTACGGAATCGAA             GCCGTCA AGAC TCACGGC              GCATTAAAAGGCGGA  52 124
HC661_RS14310 2930753 .. 2930778 -   -12  -5.18561   GAAATATGTAAAAAA         GCCTTTTTGC ATGTCA GCAAAAAGGC          CTGTTTTTTATCCGA 100 33
HC661_RS14305 2930179 .. 2930202 -  -3.8  -2.85987   ATGTAAAACATACGA          TTGACCCGCC GGAG GACGCATCAA           AAGGCTTGACGGATA  45 51
HC661_RS14295 2929483 .. 2929507 -  -8.6  -4.90778   GGCAGCCAAATAAAA         GACCGAGTGCT TTAT AGC-CCCGGTC          TTCCCTTGTTGATTA  90 38
HC661_RS14290 2928945 .. 2928958 -  -4.5  -2.78935   ATACCCGCTAGTATA               GCCTC CTTT GAAGC                AAATGTTACGGTTTG  48 31
        ytkD 2928322 .. 2928344 - -11.3  -5.30575   GAAAAATTTAAAAAA          GACCCGTGCG TAAA CGC-CGGGTC           TTCGTTTTTATGATT 100 33
HC661_RS14265 2924763 .. 2924778 -  -2.6  -4.11692   CAGGCATTCCCAAAA              TGAAAA TCCC CTTTCA               TTCTCTTATTCTTTA  55 65
HC661_RS14260 2924484 .. 2924507 - -11.7  -5.26875   CGTGTAATCAAAAAA          GCCAAGGGC GTTTAT GCCCTCGGC           TTTTGTTTTTTCAGT 100 36
        metK 2921158 .. 2921175 - -11.3  -4.03085   CTACAAAAAGGGAAA             GCCGCTT AAGT AAGCGGC              TATAAAATTATTCTC  90 33
        asnB 2919112 .. 2919133 - -13.1  -5.57729   AAACAATAGAAAAAA           GGCTTTCGA TAAC TCGAAAGCC            TTTTGGATTAAACGA 100 33
HC661_RS14240 2917510 .. 2917529 -  -7.1  -5.15634   GATCCTATGAAAAAA            GAGCCCA TTTCAG CGGGCTC             TTTTTTTACGCTTTT  86 31
HC661_RS14230 NONE
HC661_RS14225 2914881 .. 2914910 -  -2.9  -6.02919   TCATAAATAAAAAAA       CTGCGCCGTC AATGTACACGA GA-GGCGCAG       TTCCCCATTACGAAC  88 33
HC661_RS14220 2913976 .. 2914001 -  -6.9   -5.4477   AAACCGTTAAAAAAA         GAGACA-GCGTA AAA TGCGCATGTCTC         TTTTTATTTATTGTT  93 59
HC661_RS14200 2911568 .. 2911587 - -12.8  -5.90231   AGAAATACAAAAAAA            CCCGCCGG GATT CCGGCAGG             TTTGCAAACCCTTTG 100 52
HC661_RS14195 NONE
HC661_RS14190 NONE
HC661_RS14185 NONE
HC661_RS14180 NONE
HC661_RS14175 NONE
HC661_RS14170 NONE
HC661_RS14165 2904963 .. 2904981 - -12.4  -4.86133   TAGATAGAGGAAAAA             CCGGCTGA TGT CCAGCCGG             CTTTTTTCCTTTACA 100 36
HC661_RS14160 NONE
HC661_RS14155 2903220 .. 2903243 - -11.8  -4.98103   GAACAAAAGAGAAAA          GCATGTGACA CTTT TGTCACACGC           TGAACATGCTGACGG 100 18
HC661_RS14150 NONE
HC661_RS14145 2900408 .. 2900427 -   -15  -5.38047   TATTCATACAAAAAA            GCCTCCGC TTAT GCGGAGGC             TTCTCAACTTGTTTT 100 39
HC661_RS14140 2899468 .. 2899491 -  -7.4  -5.16237   AACCCCATGAAAAAA          CGGAAACCGCA AGC CGCGG-CTCCG          TATCGATCACGTTAT  86 158
HC661_RS14135 2898205 .. 2898240 -   -15  -3.85698   TTCCGGTCGTATAAA    CA-AAAAAATCCCGCCG ACA CAGCGGGATTTTTTATG    TCGTCATCGCACTTG 100 29
HC661_RS14125 2896364 .. 2896392 - -10.3  -6.07969   TAAAACTAAAAAAAA        CTCCCTCATCCCT AAA AGGGACGAGAGAT        TTTTGTTTCCCGCGG 100 326
        leuS 2893821 .. 2893843 - -17.8  -5.24531   AGGCCTGATAAAAAA           GCCCCTCTCT GTA AGAGAGGGGC           TTCGTCCGGTCAGTT 100 35
HC661_RS14115 2893381 .. 2893409 -  -6.2  -5.60993   TTTTTTATAAAAAAA       GAAGAAAA-AGAC GCAC GTCCCTTTTCTTC        TTTCACTTCAAAGCG  95 41
HC661_RS14110 2892805 .. 2892817 - -10.5  -2.95192   TTGAAGCGCACAAAG                GCCGG CTT CCGGC                TTATCATTGATCATT  75 72
HC661_RS14080 2887023 .. 2887048 - -11.9  -2.91466   AGCATAATGAACAAC         GAAGCCCGG-CA TTT CGTCCGGGCTTC         TTTATTTTCGGTATA  81 27
HC661_RS14065 2882159 .. 2882175 -  -7.2  -5.26119   CCTTTAAAAAGAAAA              GCCCGC GATAA GCGGAC              TATTCATTATTTCTC  90 39
HC661_RS14060 2881375 .. 2881398 -   -14  -4.96848   TCCTCTATATAAAAA          GCCCAAAACA AATC TGTTTTGGGC           TTTTCTGATATCGAT 100 40
HC661_RS14050 NONE
HC661_RS14045 2878895 .. 2878918 - -11.1  -5.16841   GGACATTAAGAAAAA          TCCCTTTCC TTTTTC GGAAAGGGA           TTTTCACATATAAAG  93 29
        pepV 2876066 .. 2876087 - -11.5  -4.98255   TTTGAATGATAAAAA           GGGATGCCG CTTT CGGCGTCCC            TTTTTATTATCACTT  95 35
        thpR NONE
HC661_RS14020 NONE
HC661_RS14015 2872340 .. 2872379 -  -2.3  -5.58179   CATGAGAATAAAAAA  GACAGCTATTGA-GAG TCTCATATG CTAATCAATAGCCGTC  CTATAAATTTTAGCG  80 152
HC661_RS14010 2871030 .. 2871060 - -13.2  -3.78193   CATGAAACATAAAGA       GCCGCAAGCGCCTT TTA AAGGCGCCGGCTGC       ATAAAAAAAGAGGCT  95 403
        trmB 2870308 .. 2870329 -  -6.6  -5.60993   GGCGGCATAAAAAAA           CAGACTCC CGCATC AGAGTCTG            TCTTTTGTTCTCCAT 100 16
HC661_RS13995 NONE
HC661_RS13990 2867602 .. 2867634 - -13.7  -5.32944   CGGACAAGCAAAAAA      TAAAGCCCAAAAC CATCAGC GTTTTGGGCTTTA      TTCGGTTACATCGGC 100 31
HC661_RS13980 2865999 .. 2866029 -   -12  -3.82946   TTATTTGAAACAGAA      TAAGCAGG-CCGC CTTTAT GCGGTCCTGCTTA       TTTTTTCACACATTT  91 31
HC661_RS13970 NONE
HC661_RS13965 2864197 .. 2864209 -  -2.7   -3.3341   AAAAAGCGTTCATAA                GAAAA ATC CTTTC                TAATCCTTTTTCGAC  46 25
HC661_RS13960 2863517 .. 2863550 - -21.3  -3.17571   AAGCTCCCAACTGAA     GAAAGCCGTTAAGCA GGCC TGCTTAACGGCTTTC      TCTCACATCATTCGA 100 64
HC661_RS13955 2860656 .. 2860671 -  -6.8  -4.07568   CGCCGCGGGCGAAAA              GC-CCGC ACA GCGGCGC              TTCCATTTATTTTTA  71 172
HC661_RS13950 2859253 .. 2859271 -   -11  -5.03715   AGCACGCGCAAAAAA             GCAGTGAG AGC CCCACTGC             TTTTTCGTTACGCTA  93 33
HC661_RS13945 NONE
HC661_RS13940 NONE
        ytxJ 2857749 .. 2857778 -  -5.9  -2.79831   GTTATGCGAAAATAG       GAATATGAAATAA TAAA TTTTTTCACATTC        GGCTTTATCACCAAA  52 150
HC661_RS13930 2856562 .. 2856576 -  -4.9  -5.92337   AGATACGAAAAAAAA               GCCGC GCGAG GCAGC               CTTTAAAGAGCGGAA 100 48
        ccpA 2855272 .. 2855302 -  -5.5  -5.28481   TACTCAAGTAAAAAA      GCAAGATTCCACCC CTCA GAGTG-AAGCTTGC       TTTTCCGTTTTTTTA  85 38
        motP NONE
        motB 2853747 .. 2853765 -    -6  -5.95449   AAACAAAATAAAAAA             CGACCT TATGAGG AGGTCG             TTTTTTTGATCACAA 100 12
        acsA 2849098 .. 2849124 - -17.4  -5.83211   TATGAAAATAAAAAA         CGCCCCTTCGTT TAA AACGAAGGGACG         ATATAATCGCGGTAC 100 302
HC661_RS13890 2847760 .. 2847789 - -11.4  -5.65678   ACAAAACATAAAAAA       GCAG-CCTGCCGC ATTGA GCGGCCGGACTGC       TTTTTATTTTCAGTA 100 35
HC661_RS13870 2844428 .. 2844445 -  -9.1  -5.24796   TTTATACAACAAAAA             GACCCGT GGGA ACGGGCC              TTTTGCAGGCATTTT  93 71
HC661_RS13865 2843849 .. 2843890 -  -8.8  -5.36441   TTTTGACATAAAAAA CGGACAC-GAACAAACAGC GCCAT GTTGTCAGTTCAGTGTCCG CAGATGATGATACCG  95 129
HC661_RS13860 2842766 .. 2842790 - -10.8  -5.14645   ATAAGCGAATAAAAA          TGCACAGACC CGTTC AGTCTGTGCA          TTTTTTTATGGATTT  93 279
        hmpA 2840378 .. 2840394 - -10.1  -6.14618   TATAAAATAAAAAAA              GCACCCA ATC CGGGTGC              TTAACATCGTCCTTC 100 50
HC661_RS13835 2838438 .. 2838454 - -12.3  -5.65927   TACTTAAATAAAAAA              GCGCAGA GTA TCTGCGC              TTTTTATAAATCCTC 100 29
HC661_RS13820 2835862 .. 2835873 -    -3   -5.4505   TTCGTTAAGAAAAAA                GAAA GCAT TTTC                 TGATGAAAGGCCGTC  78 104
        refZ 2832826 .. 2832841 -  -3.2  -4.31485   GAAGCAAAAAAAAAT              CCCG CTCATATT CGGG               TCGGACGCCCATCAA  63 84
        ezrA 2830167 .. 2830195 - -12.6  -5.42514   TGAGAAACTAAAAAA       CTGCACCTCTGAT TTCC ATCAG-GGTGCAG        TTTTTGCTTATGCGT 100 41
HC661_RS13785 NONE
        thiI 2826157 .. 2826170 -  -2.4  -3.54475   CTTGTGAGTATAGAA               TGTG ATAAAA CACA                TGTCTTCATTCAAAA  47 65
HC661_RS13775 2825863 .. 2825882 -   -15  -5.14965   ATTCCCATGAAAAAA            GAGCGGGG AATT CCCCGCTC             TCTTAGCCATTATGT 100 51
HC661_RS13770 NONE
HC661_RS13765 2822543 .. 2822568 - -13.3  -5.67063   TTTATCATAAAAAAA         GAGGACGGGCA TCAC TGCCTGTCCTC          TTTTTCATATACGAT 100 11
        sppA NONE
HC661_RS13750 2820004 .. 2820030 -   -11  -6.07969   CAAAACCAAAAAAAA         TAAACCCGGA CGTTTAT TCCGGGTTTA         CTGCTTTTATTTGCG 100 32
HC661_RS13745 NONE
        ytfJ 2818787 .. 2818809 -  -8.5  -5.44119   CGCATCGTAAAAAAA           GCTAACTGC GGGCG GCAGTTAAC           TTTTCTGTTATAAAT  95 33
         tpx 2818161 .. 2818186 - -11.9  -4.25104   TCCTTGCCATGAAAA         GAGCTCCGCGGC AGC ACC-CGGAGCTC         TTTTTCTCTCTTTAC  95 37
HC661_RS13730 2817111 .. 2817139 -  -9.6  -4.77757   TTTTAAAAAGCAAAA        GCAGTGCGGGAT TTTGC ATCTCACACTGC        TTCTTCGCCATTATT  93 36
HC661_RS13725 2815619 .. 2815639 - -11.9   -5.4833   GCATTCAATAAAAAA            GCACACCCT AAA AGGATGTGC            TTTTTTCGATCATTA 100 38
HC661_RS13720 2814997 .. 2815020 -  -7.4  -5.93809   CTTTTATAAAAAAAA          CCCCACCCAA TTTT TTGAGCGGAG           CAGAGCCTTTTTATA 100 44
HC661_RS13715 NONE
        argH 2812082 .. 2812099 -  -7.7  -5.86061   CCGCACGAAAAAAAA             GCCGTCT TTAC AGACAGC              TTAATTTTCTGAAGG 100 228
HC661_RS13705 2811161 .. 2811185 -  -2.3  -3.56985   CATAAAAAATTAATA          TTTATCAAA TTCCCTT TTTGACAAA          CGAAAAAACTTACAG  47 35
HC661_RS13700 2810406 .. 2810434 - -14.8  -4.91109   GCGGCATCACAAAAA        GACCTTCTGAAT GCTTG ATTCAGAAGGTC        TTTGACACATATGTC 100 39
HC661_RS13695 2808970 .. 2808997 -  -8.4  -2.67245   CCACGCATAATGAAT        GCCAAGGGACCC GGGT GCGTCCCTTAAC         TTCTCTCCATCAGCT  65 21
HC661_RS13685 2807591 .. 2807604 -  -8.1  -4.33755   ATGAACACTAAGAAA               GAGGG TCTC CCCTC                TACTTGTGTTCGTTA  80 25
        dnaE 2802927 .. 2802941 -  -7.2   -2.8341   TTAAATAAGATAGCA               CAATTG TTT CAATTG               TATAACAAAACGATT  60 51
HC661_RS13660 2801547 .. 2801576 - -15.1  -3.12327   TCCGTATATTGAACA       GCAGCGCGTTG TTTTTTTC CAACGCGCTGC        CATTTCATTTTTGTG 100 44
        accD NONE
        accA 2799403 .. 2799430 -   -10  -5.47914   AAAAATCACAAAAAA        TAAACGTG-AGCC ATA GGCTTCACGTCTA        TTCAGTTTACCCCGA 100 27
        pfkA NONE
         pyk 2796448 .. 2796469 -  -8.7  -4.81359   AACCTAAAGACAAAA           GAGAAGGGA GAAC CCCCCTCTC            TTTTTTAAAGCTGTT  88 40
        fxsA 2795962 .. 2795986 -   -10  -5.28942   CAGTCCAAATAAAAA          CAGCAGCCCT GTAAG AAGGCTGCCG          TTTTTATTTGATAAT 100 29
HC661_RS13625 2794257 .. 2794271 -  -4.9  -5.93809   TCTCCACAAAAAAAA               GCAGC TTTAC GCCGC               TTTTTTACTTTACGA 100 35
HC661_RS13620 2793349 .. 2793369 -  -9.7  -5.16151   TAAATGGAAGAAAAA            CCCTCCTCA TTT CGAGAAGGG            CTCTGACTTATACTT  93 120
        citZ 2791477 .. 2791508 -  -5.5  -4.45083   TTCATATTTAGAAAA      CATTTTATTTTTCT TGTAT AGA-AAATAAAATG      ACTTTTCTCAAGATT  70 117
         icd NONE
         mdh 2789149 .. 2789175 - -15.2  -3.94933   TTAATTGTAAAAAGA         GGAAGGCTTCTG ATT CGGAAGCCTTCC         CTTTTTTCTTATGAC 100 34
HC661_RS13600 NONE
HC661_RS13595 2786392 .. 2786420 -  -7.4   -5.2696   TGAAAACGCAAAAAA       GGACGGGAACAAG AAAA CACGTTCCCG-CC        GTCAAAATTGGCTCC  90 122
        polA NONE
        mutM NONE
        ytaF 2781987 .. 2781997 -  -3.2  -3.23984   TAAACCGATGACCAA                 GCTC AAA AAGC                 CCACTCCTTCTTACA  46 36
HC661_RS13575 2781370 .. 2781393 - -16.8  -4.98255   TTTTAACCAGAAAAA          CACCGTTCGG CTTT CCGAACGGTG           TTTGTTTATGCCCAG 100 31
HC661_RS13560 2778656 .. 2778666 -  -2.4  -5.60993   TCTTCCATAAAAAAA                 GCAG GAT CAGC                 GTCTCAGGCTGCCTG  80 49
HC661_RS13555 2777271 .. 2777281 -  -3.2  -2.58579   TGAATTTCCGAGAAC                 TGAC CCG GCCA                 TTTACCACGGGGGAA  43 204
HC661_RS13550 2776733 .. 2776749 -  -2.3  -5.94713   ATTTTACAAAAAAAA              TGCTT AAAGAAA AAGCA              ATGCTGTTTTTTTAC  86 117
        nrdR NONE
HC661_RS13540 NONE
        dnaI NONE
HC661_RS13530 NONE
        ytxC 2771711 .. 2771736 - -11.1  -5.00138   TATGCAAATCAAAAA         CCCCGCCCCCT ATGA AAGGGACGAGG          TTAAATAAACGGAAT  93 376
        thrS 2769710 .. 2769730 -    -9  -5.50499   TTATACGCAAAAAAA            CCCCATTC TGAAT GAACGGGG            TTTTTGTATTTCCGG  95 41
HC661_RS13510 NONE
HC661_RS13505 2766212 .. 2766236 - -11.5  -4.35524   TGCTGAAATGCAAAA          GCCGCCTCATA TAA TATGAAGCAGC          TTTTTTAAGTCCTTG  93 7
        lrgA NONE
        lrgB 2764935 .. 2764953 -   -16  -5.94214   AACACAATAAAAAAA             CCCGGGTC TAT GACCCGGG             TTTATCCTCCGATGA 100 27
        infC NONE
        rpmI NONE
        rplT 2763427 .. 2763447 - -10.4  -5.47218   CTTTACGTAAAAAAA            CCGCTCCC GGAAA GAGAGCGG            CTTTTTCAACTTACT 100 36
HC661_RS13475 2763106 .. 2763130 - -11.4  -5.32608   AAAAAAGCGAAAAAA          GCAGGCGAGC AATAA GCTCTCCTGC          TTTTTATTCTTTATA 100 29
HC661_RS13465 2761424 .. 2761448 -  -5.8  -5.76633   GTACAGACAAAAAAA          GAATCTGC TGTAAAAAG GCAGATTC          TTCCGTATCTTTATT 100 36
HC661_RS13460 2760325 .. 2760344 - -11.4  -5.27477   ATTGCAAGTAAAAAA            GCCGGACA CACA TGCCCGGC             TGATCAATTAATAGG 100 33
        araA NONE
        araB NONE
        araD NONE
HC661_RS13440 NONE
HC661_RS13435 NONE
HC661_RS13430 NONE
HC661_RS13425 NONE
HC661_RS13420 NONE
HC661_RS13415 2749634 .. 2749652 -  -4.5  -5.75342   TTTGCGTAAAAAAAA             GCCGG CGGCTCAGC CCGGC             TTTTCGGAACATTAT  95 37
HC661_RS13410 2747695 .. 2747719 - -10.8  -3.97088   TGTCATAAGATGAAA         GCAGAGAGACC GATC GG-CTCTCTGC          TTTTTTTATGATGCT  88 63
HC661_RS13385 2742321 .. 2742345 -   -10  -6.14618   CAGAAAACAAAAAAA          CCCGCCCCTT GAGAG AAGGGACGAG          TTGTGGCCGCGGTAC 100 302
        pheS NONE
HC661_RS13375 2738769 .. 2738790 - -13.1  -5.55769   GGTCATAATAAAAAA           GCTTGCAGA GTGA TCTGCAAGC            TTTTTCTTTATCCTC 100 33
        zapA NONE
HC661_RS13360 2736865 .. 2736883 -  -5.3  -5.42862   AGAGCTTGAAAAAAA             CTTCTCC GGTCA AGAGAAG             TTTTTTATGCCCCGT  87 30
        polX NONE
HC661_RS13350 NONE
HC661_RS13345 2732137 .. 2732161 - -10.7  -5.45652   ATTCTCAATAAAAAA          GGCCGCCGA TTTTAGT TCGGCAGCC          TTTTTTCAGTATTAA 100 135
HC661_RS13335 2729601 .. 2729618 -  -7.1  -3.85698   CCTTCCTTCGATAAA             TGAATGA CTAT TCATTCA              TAACTTCATGATAAA  71 71
HC661_RS13330 NONE
HC661_RS13325 2728178 .. 2728188 -    -4  -3.58864   TCATCAGTACAAATA                 GATT CAT AATC                 TTATCCCCTTTATCT  52 35
HC661_RS13320 NONE
HC661_RS13315 2726371 .. 2726394 - -10.3  -4.67563   TAACACAAATTAAAA          CCCTCTGAC AAATAA GCCAGAGGG           TTTATGATTATGAAT  93 33
HC661_RS13310 NONE
        trxA 2724181 .. 2724206 - -14.1  -5.27779   TGGAAGATCAAAAAA         GGCGATTCCCT TTCA AAGGAATCGCC          CTGCCGTAACGGAAG 100 49
        uvrC 2722019 .. 2722044 -   -12  -5.88565   TCCACAATAAAAAAA         GCAATGAGAG GAATAG CTCTCATTGC          TTTTTCATATCATTA 100 296
HC661_RS13295 2720682 .. 2720703 - -10.9   -5.1925   GTATAATTGAAAAAA           GGCGGTGACT CCA AGTC-CCGCC           TTTTTGCCTGCCCGT 100 41
        sdhC 2719331 .. 2719341 -  -3.2  -3.01726   TTCTCTTACACAAAC                 GCAA AAA TCGC                 TTTTAAACCTACGTA  45 5
        sdhA NONE
        sdhB 2716729 .. 2716750 - -12.3  -5.60993   CTCCTTATAAAAAAA           CCTCTCCCG TGCG CGGAAGAGG            CTCTTTTTCTCTTTC 100 41
HC661_RS13270 NONE
        gerE 2715885 .. 2715915 -  -4.1   -4.0098   CGCCAACGCAAATAA      CCGG-CT-CCTTCTC GAA AAGAAGGAAAACCGG      CAAGAATCAGAGCTC  59 32
HC661_RS13260 NONE
        racE 2714442 .. 2714459 - -10.5  -5.47399   GGAAGCGCAAAAAAA             CCCGCCG TAAA CAGCGGG              TTTTTTGATTTATTT 100 35
HC661_RS13250 NONE
         rph NONE
HC661_RS13240 NONE
HC661_RS13235 2711260 .. 2711297 -  -4.8  -4.57837   ATATTTTTTTAAAAA   CTTTTGATGGGGAAGA ATGAAA TCTCCCCCATCACTTG    TTAAAAACTGATTGT  71 26
HC661_RS13230 2711061 .. 2711071 -  -2.4  -5.26316   TCATCCGATAAAAAA                 GGCC AGC GGCA                 TCAGTTTTCACTCTG  73 64
HC661_RS13225 2710876 .. 2710902 - -10.2   -5.9362   TAAAATACAAAAAAA         CCTCAAACCC ATTGTCA GGGCTTGAGG         TTTTTTATACGTCCC 100 34
HC661_RS13220 2710446 .. 2710463 -  -9.8  -5.02502   CAGATGATACAAAAA             CCGGCC TCCCAC GGCCGG              TTTCTTTTCTTATTC  93 39
        ilvB NONE
        ilvN NONE
        ilvC NONE
HC661_RS13195 NONE
        leuB 2703326 .. 2703341 -  -7.6  -2.55896   CCTATGAACTAAGAC              CGCTTT CTTT AAAGCG               TCACACTATAGATTT  59 26
        leuC NONE
        leuD 2701231 .. 2701253 - -11.3  -5.44119   CGCACGGTAAAAAAA          GCCG-CCGGA CAGA TCCGGTCGGC           TTTTTTCAGGCTTGA 100 31
HC661_RS13175 2700027 .. 2700045 -  -5.2  -3.11955   AGAATCATTATGTAA             TGAACTGG CAG CCTGTCCA             ACCGTAATTCTCATT  53 118
        clpX 2697076 .. 2697101 -  -9.1  -5.89921   AGGACAAGAAAAAAA         CCTCCTGA-TCA ATT CGAGTCAGGAGG         TTTTGTCATGTTATG 100 36
         lon NONE
HC661_RS13150 2692162 .. 2692194 - -16.5  -2.77512   AACAAAACTATACGA      TAAAACCCAAAACGC ACT GCGTTTTGGGTTTTT      CATTACCGGCTGATC 100 28
HC661_RS13140 NONE
        ccsA NONE
        hemC NONE
HC661_RS13125 NONE
        hemB NONE
        hemL 2685194 .. 2685220 - -13.1  -5.09895   GAGGCATTGAAAAAA         GCCGATACAAG TCTTG CTTGCATCGGC         TTTTCGGTATCAGCG 100 35
HC661_RS13110 NONE
        ysxE 2682185 .. 2682209 -  -9.3  -5.72616   ATGGATATAAAAAAA          CGAGTCCCGTT ATG AAGAGGACTCG          TTTTCCGCTTTTATT 100 10
HC661_RS13095 2678860 .. 2678881 - -14.5  -3.88232   TCTTTTATACAACAA           GGCGGTTTC TTAG GAAACCGCC            CCGCTGTTTTATCAG 100 37
HC661_RS13090 2677496 .. 2677529 -  -6.7  -4.91109   TTTTCAGCATAAAAA     CACCCGGCAAAACCGT AAA ATGGTCT-GCCGGGCA     TCCGAGGGGCTGTCA  84 38
HC661_RS13085 2676604 .. 2676628 -  -6.5  -6.09133   TAGGCGAAAAAAAAA          GAACAAGAC TTTTGTC GTCTTGTCC          AAAAAACGTTCGCCA 100 47
HC661_RS13080 2675496 .. 2675513 -  -9.1  -5.86976   TGACAAAATAAAAAA             TCCCGCC GGAT GACGGGA              AATGAGATACTATTT 100 35
HC661_RS13075 NONE
        radC 2674026 .. 2674039 -  -2.3  -4.98531   TTCTTAAAGCAAAAA               TACCC TAAA GGGAA                AAACTCATAAAATCT  67 72
        mreB NONE
        mreC 2672071 .. 2672103 -  -9.1  -4.06805   AAAATCATAATCAAA      GGGAGAAGGAAACGT TTC ACGATCCTTCCTCCC      CTGTTGTTACGCTTC  83 9
        mreD 2671561 .. 2671574 -  -2.5  -4.34482   TTCGTCAAAAAAAGA               TAAAA TCCT TTTTA                CTCATCTCTTAATTC  60 23
        minC NONE
        minD 2669986 .. 2670013 -  -8.6  -5.93252   TTGAAAAACAAAAAA        GACCTGAT-AAGC TGG GCTTCATCAGATC        TTTGTATTCTGGTAT 100 44
HC661_RS13040 NONE
HC661_RS13035 NONE
        rplU NONE
HC661_RS13025 NONE
        rpmA 2667116 .. 2667134 -   -11  -5.78622   TTACTGCAAAAAAAA             CTCCAGTC AAC GACCGGAG             TTTTTTGTGTCATTA 100 38
HC661_RS13015 NONE
        obgE 2664903 .. 2664925 - -14.2  -2.62184   CTCCCTTTTACATCA           GAGAGCCTGC AAC GCAAGCTCTC           CGTTTTTTTAATCAA  93 33
        thrR NONE
        pheA 2663535 .. 2663571 - -11.2  -4.65916   GGTATTTTAATAAAA   GAT-TAAAAAAAGCCCC CTGA AGGGCTTTTTTTATATC    GAATAGGATTGATAT  93 19
        nadB NONE
        nadC NONE
        nadA 2658187 .. 2658203 -  -2.2  -2.85351   TTTCTTCACACTATA              TGCCGA TGGAC TGGGCA              TGATGATAAAAAATT  41 66
        safA 2656904 .. 2656923 -  -6.4  -5.71712   TTGGACATAAAAAAA            GGAACGAC ATAC ATCGTCCC             GAAACATTAATCTTC 100 32
HC661_RS12965 2656156 .. 2656183 - -14.2  -4.87665   CTTTATCCATAAAAA        TACTGCCGGATG AAAT CATCCGGCAGTC         CCGTTTAACGGCTGT 100 30
HC661_RS12960 2655265 .. 2655281 -  -9.5  -5.96219   CATTCAGAAAAAAAA              GACATGT GTC ACATGTC              TTGCGTCAAAGTCAG 100 37
        ruvA 2654530 .. 2654549 -  -2.8  -2.92613   CTTCACTTGAAACGA            GCCGTTCA TCCA TGAACATC             ACCTTACTTTAATAA  43 29
        ruvB NONE
HC661_RS12945 NONE
        queA NONE
         tgt NONE
        yajC 2650784 .. 2650800 - -12.3  -5.80364   AGCGTAATAAAAAAA              GAGCGGA TTC TCCGCTC              TTTTTTTGTATGTAT 100 52
HC661_RS12920 2649174 .. 2649202 -  -6.7  -3.21099   GGCCGCCATGATGAA        CAGTTTTATCGGC GCC GCTGTCAAAACTG        GCCTAATTTTTGTTT  57 389
HC661_RS12910 NONE
       secDF 2645300 .. 2645325 - -14.1  -5.40072   TGCGGCCTAAAAAAA         CAGGCTGCCTT CTGC AAGACAGCCTG          TTCCCACTTTACTCT 100 34
HC661_RS12900 2644698 .. 2644718 -  -5.3  -2.83403   TTCCCGGGAGTAAAC            CCCGGTCTC AGG AAATCCGGG            CCGTTAACTGCTCGC  50 12
HC661_RS12895 2644267 .. 2644305 - -10.4  -2.76227   GCTAACATAAATTCA  CCCCTCAA-CCACCCTA TTATAC TAGAGCGGACTGAGGGG   TTTCAAATGTTATTC  73 35
        recJ NONE
HC661_RS12885 2641339 .. 2641372 - -14.8  -3.60323   GATGATGAAATAATA     GGAAAAAAGCACCC TGACAC GAGTGCTTTTTTCC      ATATGCGGTTAATAT 100 34
        relA NONE
         dtd 2638543 .. 2638558 - -10.4  -6.02345   CAATCATAAAAAAAA              GCTGCC GAAC GGCAGC               TTTTTTATTGTTTAG 100 30
        yrzK 2636356 .. 2636393 - -14.3  -5.95539   CTTCAAATAAAAAAA   CTCCCGCTCCTACTATA CATG TATAGTAGGGACGAGAG    TTATACCCGTGGTGC 100 305
HC661_RS12860 2635011 .. 2635028 -  -3.5  -3.79113   ATTTCGCCACAATAA             TATGTTC TTCC AAACATA              GCGTTCCTCTCCTTC  54 39
        aspS NONE
        ssrS 2632972 .. 2632985 -  -3.8  -2.60032   GGCTTGTCAAAAAGC               CGCT GGTTTT AGCG                CACAAAAAATAAAGT  45 35
HC661_RS12845 2632128 .. 2632149 -  -5.9  -5.96894   ATTCAAATAAAAAAA           CAGCCTTTCC TGA AGAA-GGCTG           TTTTTCTTTTTATTT 100 35
        cymR NONE
HC661_RS12830 2629013 .. 2629028 -  -6.1  -3.33696   CGCCGTTTTAAGCAA              GCCGT TTAACG ACGGC               GGCAAGCTTTTCGGC  60 2
        mnmA 2627820 .. 2627839 -  -5.7  -5.00616   CCTTTCGCTAAAAAA            CCCCAAC ATGCGA GTTGAGG             TTTTTTACATGTGTT  79 39
HC661_RS12820 NONE
HC661_RS12815 2624719 .. 2624742 - -12.4  -4.16943   TTCCACAGGCGAAAA          CCCGGCGCAT GTTT ATGCTCCGGG           TTTTATTACGCTTTT 100 31
HC661_RS12810 NONE
HC661_RS12805 NONE
HC661_RS12800 2623783 .. 2623804 - -11.7  -4.85433   AGACAAACGTAAAAA           GGATACTTC CGGA GAAGTATCC            TTTTTTCTGCTTAAA 100 36
HC661_RS12775 2619261 .. 2619304 - -14.1  -5.21709   TGCGACAGCAAAAAA GCTCTC-TCCCTATGCAAAC CATGC GTTCACACAGGGACGAGAGC TGTCTCGCGGTACCA 100 262
        alaS 2616581 .. 2616593 -  -4.1  -4.52703   GAAAGGATTATAAAA                CGGAT TTT ATCCA                ATCTTCCGCAGATGC  66 5
HC661_RS12765 NONE
        ruvX NONE
HC661_RS12755 2615465 .. 2615488 - -13.8   -5.9873   TTATTACAAAAAAAA          GCCGAAGCGC ATAT GCGCTACGGC           TTTTTCCGTTCATTT 100 40
HC661_RS12745 NONE
HC661_RS12740 NONE
HC661_RS12735 NONE
         udk 2610559 .. 2610582 -    -9  -3.83324   TTATAAACAGGGAAA          GAAGGGAACTG TCT CA-TTCCCTTC          CAGCCTATACATAAT  79 74
        greA 2609858 .. 2609884 - -13.1  -5.33785   AACGATCATAAAAAA         CACCTCATCCA CATTT TGGACGAGGTG         TTTCATTGTTAAACG 100 45
HC661_RS12720 NONE
HC661_RS12715 2607287 .. 2607306 - -12.2   -5.9873   GTATGACAAAAAAAA            GCAGCTGA TTAA TCAGCTGC             TTTTTTGCGGTTATT 100 36
HC661_RS12705 NONE
        mtnN 2605508 .. 2605532 -  -6.4  -4.07568   CCTCCTCCTGGAAAA          GCGGAGGA GAACGAGAA TCCCCCGC          TTAGTGAATTCGTTT  69 26
HC661_RS12695 NONE
HC661_RS12690 2603382 .. 2603395 -  -2.3  -2.86604   ACATTATAATACAAG               CTGAC AGCC GACAG                AGAATGTAAATCTAT  41 48
HC661_RS12685 2603076 .. 2603097 - -13.1  -5.10877   ATAAGAAACGAAAAA           GCCATTGTC AAAA GACAATGGC            TTTTTTTTATTCATC 100 32
HC661_RS12670 2598729 .. 2598776 - -12.3  -5.45652   ACGCCTAACAAAAAA GGCAGCATTCAACTAACCCGTCT GAAA AAACGGGGT--TTGAATGCTGCC TAACTTGTATGCATA 100 187
HC661_RS12665 2597523 .. 2597551 -  -8.1  -4.27465   CACAAGCGAAAATAA        CCCGCAGCAAA GTTCATA TGCGCTGCGGG        CAGACTAAATCCGCA  77 345
HC661_RS12660 NONE
HC661_RS12655 2596985 .. 2597008 - -11.8  -6.22802   TTTCATAAAAAAAAA          GACGGAAAAC GTAG GTTTTCCGCC           TGCTCTAGTACCAAT 100 30
HC661_RS12650 2596254 .. 2596277 -  -5.3  -4.87786   CCAATTTCACAAAAA          GAGCTGC AGTGACTTAA GCAGCTC           TTTTTATTTCCCAAG  77 48
HC661_RS12645 NONE
HC661_RS12640 NONE
        ybaK NONE
HC661_RS12620 2588411 .. 2588436 - -12.7  -4.14739   TGATTGACGTCAAAA         CACCAACCGTT TTTA AACGATTGGTG          TCGGCAGCGAAAACC 100 46
HC661_RS12615 2586254 .. 2586272 - -10.3  -5.90231   ATAAACAGAAAAAAA             GCAGGGA GCCAT TCCCTGC             TTTTAATAGTTTAAA 100 28
HC661_RS12610 NONE
        manA 2583169 .. 2583192 - -15.4  -4.01078   AAAAGTGATGAGAAA          CCCTTCTCTG ATGC CAGAGAAGGG           TTTTGAGGATCACAG 100 35
HC661_RS12595 2581330 .. 2581344 -  -2.1  -4.18018   CCTCCGCAGTTAAAA               CGTCT TTTTC AGACA               AAGGGTTTTTCACAT  56 19
HC661_RS12590 2580415 .. 2580425 -  -2.6  -3.07895   TTCATTTTTAACATA                 TTTT AGA AAAA                 CCAGAAGTGAATTAA  43 102
HC661_RS12585 NONE
HC661_RS12580 2579258 .. 2579279 -  -8.1  -5.83211   GACTAAAACAAAAAA           GATACCAAC ATCG ATTGGTATC            ATCTATTCATTCGAG 100 57
        satA NONE
HC661_RS12570 NONE
         tet 2577004 .. 2577031 -  -6.5  -5.40474   AGCTCCTCAAAAAAA        GGATCAAAACTT TTATC AAGTTT-GATCC        TTTTCCCTTTTTAGT  91 36
HC661_RS12560 2576682 .. 2576705 -  -2.4   -4.0896   AAATGCGTGTTAAAA          CCATACTGCT TACG AACATCATGG           TCATTTTCAAACAGA  53 45
HC661_RS12555 2575961 .. 2575986 -    -4  -5.61596   AGCGGTATAAAAAAA         CAGCTCCG TTAAAATGGC CGGAACTG          TCTTTGAATTTTGGT  85 66
        yrkP 2572449 .. 2572463 -  -2.8  -2.53263   GTTAGCGTGAATTTA               CGATGT GCC AAATCG               ATATCCTCTTCCCCA  41 8
        yrkQ NONE
        psiE 2570386 .. 2570406 - -11.9  -2.72344   TCTGATGTTCAAGCA            GCATCACCC CTT GGGTAATGC            TATGTAACAGCCGTT  81 318
HC661_RS12515 2567544 .. 2567554 -  -5.4  -2.85147   TGGAACGAACATAAG                 GATG TAA CATC                 GCCATCTTTTAAAAG  52 170
HC661_RS12460 2558416 .. 2558437 - -10.3  -5.27335   TGGCTGAAAGAAAAA           CTAGTTACT GATT AGTAACTAG            TTTTTATCTTAAAAG 100 286
HC661_RS12450 2557973 .. 2557989 -  -3.1  -3.80841   ATTATTATCATTAAA              TTTTATC GAG AATAAAA              AATGATTGCCCGCCT  54 4
HC661_RS12445 2557134 .. 2557150 -  -6.5  -5.24416   GAACCATAATAAAAA              CCGCTCC TAA AGAACGG              TTTTAACATATAGGA  87 51
HC661_RS12430 NONE
HC661_RS12425 2553616 .. 2553636 -  -8.2  -5.24129   CTGGGCCAGAAAAAA            GCTGCTGG CTTAC CCGGCAGC            GGCCCAATATGAAGA  95 345
HC661_RS12415 NONE
HC661_RS12410 2551299 .. 2551317 -  -9.6  -5.45652   ACTTTCAACAAAAAA             CACCCCTA AAA TAGAGGTG             TTTAAGAGGACGGCT 100 251
HC661_RS12400 NONE
        yqeH NONE
HC661_RS12390 NONE
        yhbY NONE
HC661_RS12380 NONE
HC661_RS12375 NONE
        rsfS NONE
HC661_RS12365 2545686 .. 2545708 -  -8.5  -4.63184   AATGCATTTTAAAAA           CCATCGTTC CGTTT AAACGATGG           TTTTTGGTTTGCCTG  87 15
HC661_RS12355 NONE
HC661_RS12350 NONE
HC661_RS12345 2540828 .. 2540853 - -10.5  -4.00532   TCGGCAAATAGTAAA         GAGGAAGCTTT AAGG ACAGCTTCCTC          ATTTATAATAAACGC  86 319
        holA 2539713 .. 2539733 -  -8.3   -5.1523   TGCATAATACAAAAA            CGATCCC TTTAACG GGGATCG            TTTTTTTCATTCAGT  90 32
         gpr NONE
HC661_RS12315 NONE
HC661_RS12310 2536473 .. 2536489 -  -5.1  -4.91194   ACAAGAAAGAGAAAA              GCTTCCT TTA AGGAATC              ATCCGCTTTTCTCTT  77 49
        lepA 2534513 .. 2534542 - -14.3  -4.03234   TCTTCTTTACAGAAA       GAAGCCGCAGC-GC GGG GCTGCGGCGGCTTC       CGTTATTTTTTCGGG 100 28
HC661_RS12300 NONE
        hrcA NONE
        grpE NONE
        dnaK 2529644 .. 2529672 - -10.4   -5.7946   CGGGCAAGAAAAAAA        GTCAAAGCCAAG AGATG CCTGACTTTGAC        TTTCTGTCTGTTGAA 100 89
        dnaJ NONE
        prmA NONE
HC661_RS12270 NONE
        mtaB 2525284 .. 2525303 -  -7.1  -5.49809   GAAACCGTAAAAAAA            CCGATGC GGGAAG GCACCGG             TTTTTTTATCTGTTA  93 38
        rpsU NONE
HC661_RS12250 2523509 .. 2523531 - -11.4  -5.64274   TTATGTATAAAAAAA           GACATCTCTC AAG GAAAGATGTC           TTTTTTCTTGTCAAT 100 40
HC661_RS12245 NONE
        floA 2521066 .. 2521076 -  -2.4  -2.87463   AATCTCGTGCATATA                 GCGG CTC CCTC                 CTTAATAGAGAGGTT  41 39
HC661_RS12235 2520579 .. 2520620 - -13.9  -5.60993   TGCCCCATAAAAAAA GAACCCCCTTTCATCTCAT ATGT ATGATTTGAAAAGGGGTTC  TAACACTTTATTTTT 100 33
        yqfC NONE
        yqfD NONE
HC661_RS12220 2518091 .. 2518116 -  -9.1  -5.02502   CACATCATATAAAAA         TGACCCGAT AACGGGAG ATCGGGTCA          TTTTTGCATTACTTT  90 34
HC661_RS12215 NONE
        ybeY NONE
HC661_RS12205 2515091 .. 2515105 -  -4.3  -3.06696   TCTTCTGCTAACATA               TCTTC GGCAA GAAGA               TGAGTAAACCAATGA  49 3
HC661_RS12200 NONE
HC661_RS12195 NONE
HC661_RS12190 NONE
        recO 2512313 .. 2512355 - -17.9  -5.26875   GCGGCAACCAAAAAA CTCCCGTCTCTATGCTTGC CGGCC GCAAACATAGGGACGAGAG TTCTCCCGCGGTTCC 100 230
        glyQ NONE
        glyS 2509304 .. 2509331 -  -9.9  -4.28049   TGTAAAAGGGGAAAA        GACGATTGCCG ATCACA CAGCAACCGTC         TTTTTCTTTATTTTA  89 33
        ccpN NONE
HC661_RS12165 2507741 .. 2507761 -  -4.7  -4.70659   TTGCATACCCAAAAA            CCCAGGA TAAAGCG TCCTGAG            TTATCGGCCCTTTGT  72 26
HC661_RS12160 NONE
HC661_RS12155 NONE
        rpoD 2503826 .. 2503848 -  -9.9   -5.4251   CTTATACATAAAAAA           GAACGGATC AAAAA GACCCGTTC           CATTCTATTCGAGAA 100 30
HC661_RS12145 2503075 .. 2503093 - -10.2  -5.74122   TATCATATAAAAAAA             CCGCCCGG AAT CCAAGCGG             CGGATAGAGTTTTTC 100 72
HC661_RS12140 NONE
HC661_RS12135 2501172 .. 2501190 - -14.6  -5.95286   AGTAAAAATAAAAAA             CTGAGGCC CGG GGCCTCAG             TTTTTTTATAAGAAG 100 31
HC661_RS12120 NONE
HC661_RS12115 2497002 .. 2497021 - -11.4   -4.1822   TTTCAGGGTAAGAAA            GGAGGGAC ACCC GCCCCTCC             TTTCTTTCTTATTGA  93 34
HC661_RS12105 2495658 .. 2495692 - -10.9  -4.57569   GTATCGCTCCAAAAA    GAAAATGG-CAGCTGT CTGA ACAGCAGGCCATTTTC     TTATGATGTATCAAA  91 76
HC661_RS12100 2495185 .. 2495204 -  -9.3  -5.15117   CAAAAGCTGAAAAAA            CCTCCTG TATAAG CAGGAGG             TTTTTTATCGGCACG  90 30
HC661_RS12090 2494037 .. 2494083 - -14.6  -3.96497   GCAAAAGCAGAACAA GAAGCACAAAAAGCTTGACGGA TAT TCCGCCAAGCTTTTTTTGCGTT GTGTTAAAAAAACGG 100 29
HC661_RS12070 2490946 .. 2490958 -  -2.6  -2.66009   GAAAAAGCTCACAAT                CCGG CGATT CCAG                CAGACATATTACACT  41 71
HC661_RS12065 2490193 .. 2490216 - -13.2  -5.83226   AAGTCAATAAAAAAA          CAAGGCCTCC CGCG GGAGACCTTG           TGATCATTCAACTCA 100 42
HC661_RS12060 2488754 .. 2488776 -  -5.6  -4.63044   ATTTACAGAAAGAAA           TGACACCT TCTGTTC AGGTGCCA           TTTTTCATTCTAAAG  73 73
HC661_RS12055 2486548 .. 2486566 - -13.2  -5.93809   TTTGTATAAAAAAAA             CGCTCACA GAT TGTGAGCG             TTTTTCTATTAGTTG 100 34
HC661_RS12050 2485496 .. 2485510 - -12.8  -3.66744   CTATAAAGAAGAAGA               GGCGGG GAG CCCGCC               CTCCCCTCAGCTTTG  90 32
        pstC NONE
        pstA NONE
HC661_RS12035 NONE
HC661_RS12030 2482005 .. 2482029 - -14.9  -4.51699   ATAAGGAGTATAAAA          CGGACCCGGTC AAT GGCCGGGCCCG          TTTTTTTCATCCGAA 100 32
        rpmG 2480578 .. 2480603 -  -6.9  -5.56264   CTGAAAGACAAAAAA         GCCAGAACTTT ATTG AAAGCTCCAGC          TTTTTCCGCTGTTTT 100 48
HC661_RS12010 NONE
HC661_RS12005 2479682 .. 2479713 -   -16  -2.80817   AAGCTGACAATACGA      GAAAACCTGCCGTT TTTT ACCGGCAGGTTTTC       TTATGCAAAAAATCC 100 61
HC661_RS11995 NONE
HC661_RS11990 2476870 .. 2476903 -  -7.5  -5.71712   GGGGAGATAAAAAAA     GAAAG-CCGCCCGC GATATGG GCAGGCAGACTTTC     TTCAGCAGTTTTGAT 100 27
HC661_RS11985 2475675 .. 2475697 -    -2  -4.46112   GTTTATGTAAACAAA           TGAGAAATTT CAC AGATGTCTCA           AAAAACAAGCGACCT  59 23
HC661_RS11980 NONE
HC661_RS11975 2474235 .. 2474257 - -16.4  -4.35116   GACTGCACATTAAAA           GCCTGTATCC AAT GGATACAGGC           TTATTTTTTATTGCT 100 33
HC661_RS11965 2473235 .. 2473256 - -10.2  -4.99035   CCACTGACAGAAAAA           GACAGACC GATTAT GGTCTGTC            TTTTTTCATTTACAG  93 35
HC661_RS11955 2472318 .. 2472355 -  -8.5  -5.09426   CGCAACCGCAAAAAA   CGAAGATTAGCTGATAA ATTT TGATCAGCGGATCTTCG    TTTTTCTCTTATGAT  90 34
HC661_RS11945 2471281 .. 2471320 - -11.4  -4.67234   ATTGAAGCTGAAAAA  GCTGAATAGCTGAGGGAG ACAT CCCTCCCGGCCATTCAGC   TTTTTATCATCTTAA  95 32
HC661_RS11935 2468871 .. 2468886 - -10.4  -5.53991   CAGCCATCAAAAAAA              GCAGGC GTAT GCCTGC               TCTTCTTAGCGTTTC 100 31
HC661_RS11930 NONE
HC661_RS11925 NONE
HC661_RS11920 NONE
HC661_RS11915 NONE
HC661_RS11910 NONE
HC661_RS11905 NONE
HC661_RS11900 NONE
HC661_RS11895 2464505 .. 2464527 - -15.6  -3.85878   GAAGAATACCAATAA           GGCCCTCCTG TAT CAGGAGGACC           TTTCGTGTGATTCAC 100 42
        tapA NONE
HC661_RS11880 2462665 .. 2462676 -  -5.8  -2.83403   TTTTTGTTATCAAAT                CCTG TCGC CAGG                 TTGCAACCGTATTCA  52 38
HC661_RS11875 2461783 .. 2461816 -  -8.2  -4.75063   AGAAAAGCGCAAAAA     GAGGAGTAGTGC CGCCATATGT GCACAACTCCTC      TTTTAACTGTCCGAC  84 48
        gcvT NONE
HC661_RS11845 NONE
HC661_RS11840 2454191 .. 2454216 -  -8.4  -5.38249   ACTAATCATAAAAAA         GAGCT-TCCGT ATAAA ACGGACAGCTC         TTTTTTTTACACCGT  95 42
HC661_RS11830 NONE
        mntR 2452218 .. 2452240 -  -8.4  -5.62219   AAGACATTAAAAAAA          GGGC-GCCC CATTTC GGGCTGCCC           TTTATTCACCGGGAT 100 27
HC661_RS11820 2451097 .. 2451108 -  -3.6  -4.81685   ATGAAGGAGCAAAAA                GCGA AGCA CCGC                 GCCGGACACAGAGGC  69 169
HC661_RS11805 2449065 .. 2449083 -  -7.5  -5.31275   TTTCAGCATAAAAAA             TGTTCAC TTCTC GTGAACA             TTTTACCATACCGGA  90 59
HC661_RS11800 NONE
         efp 2447303 .. 2447326 -  -8.1  -5.55698   CAGAACGCAAAAAAA          GCCTGCCCC GTAAAA GGAGCAGAC           TCCGAATTTCTTTAA 100 41
HC661_RS11790 NONE
    spoIIIAA NONE
HC661_RS11780 NONE
    spoIIIAC 2445139 .. 2445168 -  -2.9  -3.58343   GCGATCAGGCCTAAA       CCTACAATTTGAA CAAT CTCAATCTGTAAG        CCCCCCTATCCTTGG  48 31
    spoIIIAD NONE
    spoIIIAE 2443508 .. 2443524 -  -2.2  -4.57569   CCATTCTGTTAAAAA              GCTCAT ATCCA ATGGGC              CTCCTTTATTTCATC  61 31
    spoIIIAF NONE
    spoIIIAG NONE
HC661_RS11750 2441523 .. 2441541 - -11.7  -4.04752   AAATGACATCAGAAA             GCCCGCA GCGGG TGCGGGC             GGTTCAGGTCTCTTA  91 38
        accB NONE
        accC NONE
HC661_RS11735 2439077 .. 2439121 - -13.2  -3.65353   TGAAATGACGGGAAA CGTATAAAAAACCAAAGGGCT GCCC ATCCCCTTGGT-TTTTATACG CTCATTACATTTCTT  95 30
        nusB NONE
        folD 2437548 .. 2437559 -  -2.2  -2.90496   CTCTGGCTGAAAGGA                GCCT TAAG AAGC                 GGGTATCGTGCTCAT  41 72
HC661_RS11720 NONE
HC661_RS11715 NONE
HC661_RS11710 2434855 .. 2434869 -  -6.4  -4.42386   CCTGTATTGATAAAA               GATCCA AAG CGGATC               AACTCACTTTCAGCA  74 161
HC661_RS11705 NONE
HC661_RS11700 2432101 .. 2432124 - -11.2  -5.26316   TGATGGCAGAAAAAA          GGAATAATAG CCCC CTATTATTCC           GGTACATCTGTCTTT 100 19
        argR NONE
        recN 2429789 .. 2429812 -    -9  -5.83226   AATGGAACAAAAAAA          TAAGCTGCCTG TAT CAG-CAGCTTA          TCCTGTCGTTTTTAC 100 23
       spo0A 2427218 .. 2427255 - -16.4  -4.28651   AGCAAAATTTCAAAA   CGCCTTCTCTTCCGCG TTCATG CACGGAATAGAAGGCG    CGAAAAAGACATCTA 100 55
        ytaF 2421978 .. 2421999 -  -6.6  -5.42862   AGATCGGCAAAAAAA           GAGAGCCGC GTCAT GCG-CTCTC           CCGAATAGAAACATT  93 81
HC661_RS11640 NONE
HC661_RS11635 NONE
HC661_RS11630 2419936 .. 2419957 - -11.7  -5.60993   CCGCCCATAAAAAAA           GAAGACTGT CTGA ACAGTCTTC            TCAGCTGCGGCATTC 100 26
HC661_RS11625 NONE
HC661_RS11620 NONE
HC661_RS11615 NONE
        mmgD NONE
HC661_RS11605 NONE
        prpB 2413081 .. 2413099 -    -6   -5.4477   AAAGCTGTAAAAAAA             GCCCTT GCAAAAA AAGGGC             TTTTTCAGTCGTCCG  91 30
HC661_RS11590 2410527 .. 2410539 -  -3.3  -2.76696   TCCGCTTTTAACAAT                GCAAG TTC CGTGC                CAAATGTGCGGGAGG  44 96
        yqiS NONE
HC661_RS11580 NONE
HC661_RS11575 NONE
        lpdA NONE
HC661_RS11565 NONE
HC661_RS11560 NONE
HC661_RS11555 2402615 .. 2402641 - -15.3  -6.11229   ATGAAAATAAAAAAA         CTCCTTTTGCC GCCCG GGCAAAAGGAG         TTTTTTTAATAGACG 100 31
        brxB 2401055 .. 2401078 -  -6.7  -5.71712   TGCCATATAAAAAAA          CCCCGCAAGC GCTTG GCTC-CGGGG          TTTTTCTTTCACTTA 100 38
HC661_RS11540 2400053 .. 2400071 -  -8.9  -5.10767   TATTCAAGATAAAAA             GCTCAAC GAAAA GTTGAGC             TTTCTTTTATTTCTC  90 32
HC661_RS11535 NONE
HC661_RS11530 2398604 .. 2398623 -  -9.4  -5.75342   CTTTCTCAAAAAAAA            GAAGAAGA GCAT TCTTCTTC             TTTTCTTCCAGTTAT 100 44
HC661_RS11525 NONE
HC661_RS11520 2396840 .. 2396859 -    -5  -2.85351   TTCCGCCATAGGATA            TGGCTTGT TCAT ACAAGCAA             AACACGTTAAAATGA  50 177
         mce NONE
HC661_RS11505 2394876 .. 2394888 -  -7.7  -2.71712   TCCCTCCGTTTAAAG                CGGTA TAT TACCG                TGCTTTTTTTTCGGT  61 7
HC661_RS11500 2393711 .. 2393730 -   -10  -5.37865   TGAAGAATGAAAAAA            GCACCCAA TCAA CTGGGTGC             TTCGTTTTTAATTGG 100 33
HC661_RS11485 2391086 .. 2391096 -  -2.6  -4.17023   TTAACCATTTTAAAA                 TTTA AAT TAAA                 ATAAAATGATATTTA  57 83
        gndA 2389606 .. 2389628 - -16.3  -4.50976   TTTGATATCAGAAAA           GCCCCCGCA ATCAA TGCGGGGGC           TTCTTCATTACTTCA 100 33
HC661_RS11470 NONE
        rpmG 2386673 .. 2386706 - -21.3  -4.51196   GGTAAACTGATAAAA     CAAAAGCCATTGTGC AACG GCACAATGGCTTTTG      TTATCGTGATCTATT 100 36
        fabD 2380644 .. 2380663 -  -2.8  -3.55457   GCAGAAAAAATGTAA            TGGCTG-GT CAT ACTCAGCCT            GTAATCGATACCAGC  48 19
HC661_RS11435 NONE
HC661_RS11430 NONE
HC661_RS11425 NONE
HC661_RS11420 NONE
HC661_RS11415 NONE
HC661_RS11410 NONE
HC661_RS11405 2352487 .. 2352512 -  -3.3   -4.3295   CCTAAGAAAATTAAA         TTTGCTCCGTCA TTT TGACAG-GCAAT         CAGATAGTCACAAAT  62 25
HC661_RS11400 NONE
HC661_RS11395 NONE
HC661_RS11390 NONE
HC661_RS11385 2316695 .. 2316725 -  -6.9  -2.94299   CAAGATTTGAAATGA      CCCGCCAAAGCTTA CGAG TAAACCC-GGCGGG       CGGATATGTGAATTT  59 39
HC661_RS11380 2315468 .. 2315488 - -15.5  -3.83205   AGCCCCCAGAGTAAA            GAGGCTTCC TGT GGAAGCCTC            TTTTATTTTTCCGTT 100 40
HC661_RS11375 2314163 .. 2314188 -  -2.6  -4.56597   CCGTTTCTTTAAAAA         TACTCA-AGCC TTTCC GGCTCTGAGTG         TTTCTGATATTAAGT  62 35
HC661_RS11370 2313360 .. 2313377 - -11.3  -3.93695   CGGACCAGTGATAAA             GCATGGG GCTT CCCATGC              TTTTTTCATTCTGTT  90 40
HC661_RS11360 NONE
HC661_RS11355 NONE
        dsdA 2308983 .. 2309002 -  -4.4  -5.27709   CGATAAAAAAACAAA            CGCTTACAA AGA TTGTAA-CG            GAAAACCGCTTCACT  80 36
        coaA 2307944 .. 2307957 -  -3.9  -3.28309   ATACATACAACTCAA               TATGA TGCA TCATA                ATATTCGCTTCCTCC  50 46
HC661_RS11340 2307354 .. 2307376 - -16.3  -5.46698   GTCAAAATGAAAAAA           CGGCGGGCT GAAGA AGCCCGCCG           CACACGGAGGTAAAA 100 213
HC661_RS11310 NONE
HC661_RS11305 NONE
HC661_RS11300 NONE
HC661_RS11295 NONE
HC661_RS11290 2301575 .. 2301602 -   -10  -5.22039   CGCAAACGTAAAAAA        GCGAAAGAAC GTATGCTG GTTCTTTCGC         TTTCACGTCATAAAA 100 33
HC661_RS11280 2300286 .. 2300307 - -12.3  -4.61566   TCTTAAATCATAAAA           CCGGCACCT TTTC AGATGCCGG            TTTATTTATATTTGT 100 27
HC661_RS11265 NONE
HC661_RS11260 2297247 .. 2297263 -    -5  -4.33621   CATCGAATTAACAAA              CGCCGC ACAAG GCCGCG              GCACACTGACCGTTG  67 137
HC661_RS11250 NONE
        aspA 2294286 .. 2294299 -  -2.5  -2.96695   GCTTTCATCAAATGA               TATAA CAAA TTATA                CTATACTGCCTCATC  43 106
        nhaC NONE
HC661_RS11235 2291470 .. 2291494 -  -9.3  -5.67063   TTCATGATAAAAAAA          CAGCACCGG CACACAT CCGGTACTG          TAAGAGTTGTTTATT 100 36
HC661_RS11230 NONE
HC661_RS11225 NONE
      spoIIM NONE
         fur 2289505 .. 2289524 -    -5  -5.38348   AAAAACAGCAAAAAA            CCCTTTCC TGGC AGAAAAGG             TTCGTAGGCTTTTAC  87 37
HC661_RS11210 NONE
        xerD 2288270 .. 2288292 - -11.9  -5.03145   CAATCCGGCAAAAAA           GCCGCGGCC CCTCT GGCAGCGGC           TCCTAAGCGCGCGGA 100 28
        deoB NONE
HC661_RS11195 2286076 .. 2286099 - -11.8    -5.626   GAGGGCACAAAAAAA          CAGCTGCTTC CGAA GAAACAGCTG           ACTTATGCTGACTTA 100 38
HC661_RS11190 NONE
     spoIIAA 2284345 .. 2284365 -  -3.2  -2.54586   CTGAAAATTCAAGAT            GCATCTCG TTTTT CATGATGC            CACCCCCAACGTTAA  42 17
     spoIIAB 2283927 .. 2283938 -    -3   -2.7186   AAATCTCCTTAATTA                CAAA GCGC TTTG                 CTTTTTGATAGGTGT  41 7
        sigF 2283125 .. 2283145 -  -2.4  -6.04953   ACACAAATAAAAAAA            GCCGGCCC GTAAA AGGTCAGC            TTTCCGTATGATCCA  86 21
HC661_RS11170 NONE
HC661_RS11165 NONE
      spoVAC NONE
      spoVAD NONE
      spoVAE NONE
HC661_RS11145 NONE
HC661_RS11140 2278002 .. 2278024 -  -9.2  -4.10657   GCATATGGGTGAAAA           GGACAGCT TCTTTTG AGCTGTCC           TTATACAAGTCCCGT  83 89
        lysA 2276609 .. 2276635 -  -9.5  -4.74504   AGCTGAATGCAAAAA         GAGACCGGA CGCCATTGT TCCGGTCTC         TTTTTTATTTATTGT  93 34
HC661_RS11125 2274956 .. 2274974 - -11.7  -5.77988   ATATACATAAAAAAA             CCCGCCT GAAAA AGGCGGG             TTTTCCGTCATTATC 100 36
HC661_RS11120 2274306 .. 2274319 -  -5.2  -2.87881   GAATCCCTGCACAGA               GGGC AAATAA GCCC                CGCACCTCATCCATT  50 50
        lepB 2273653 .. 2273678 - -11.3  -5.38951   AATTTATATAAAAAA         GCAGTTTTCCT CATG AAGAAAACTGC          CTGTACGGTTTATTT 100 35
HC661_RS11110 2273066 .. 2273089 -  -8.9  -5.69262   TCAGAAAAATAAAAA          GCGCCCTTT TCCCAT AAAAGGCGC           CTTTATTTATTCGTT 100 32
        ribD NONE
        ribE NONE
HC661_RS11095 NONE
HC661_RS11090 NONE
        ribT 2268680 .. 2268703 - -11.8  -6.19302   AGAGAAGAAAAAAAA          GCAGAGGCTGA CGG TCAGCC-CTGC          TTTTTCTATATCAAA 100 78
HC661_RS11070 NONE
        scpB NONE
HC661_RS11060 2265850 .. 2265867 -  -7.7  -5.71712   TTTCACATAAAAAAA             CTCTCCC AAAA GGAAGAG              TTTTTATCTGACTGA 100 29
HC661_RS11055 NONE
HC661_RS11050 NONE
        spmB 2263478 .. 2263495 - -12.7  -5.03994   TCTGATATATAAAAA             GCGCCTG ATTT CAGGCGC              TTCCAAATAATAACG 100 18
HC661_RS11040 NONE
        resA 2262045 .. 2262055 -  -2.4  -3.13403   CCTTTTTCATGAAGA                 CGCC TCC GGCT                 TAATTAAATTCATAT  43 6
HC661_RS11030 NONE
        ccsB NONE
        resD NONE
HC661_RS11015 2256584 .. 2256604 - -12.6  -5.85425   GAAACAAATAAAAAA            CACCCGCA GAACA TGCGGGTG            TTTCGTATGGAACAA 100 56
        sigX NONE
HC661_RS11005 2254790 .. 2254813 - -12.6   -5.5604   GTAACCAACAAAAAA          CCCAAAACAT TCAT ATGTTTTGGG           TTTTTTTACGTTAAT 100 36
HC661_RS10995 2252099 .. 2252129 - -16.9   -5.4148   CAAACAATCAAAAAA       GCGCCCGGTCTGT GTTTT ACAGAGCGGGCGC       TTTGGAGTGGTTATT 100 36
HC661_RS10985 NONE
HC661_RS10980 2248899 .. 2248913 -  -3.5  -2.64416   CAGCTGCATCACAAT               CTCCC GGTCT GAGAG               CTGCCGGATCAATTC  43 52
HC661_RS10975 NONE
HC661_RS10970 2247509 .. 2247519 -  -3.2  -2.73799   TCCATAAAGAATCCA                 TGCG CTT CACA                 CCTTGTCCGTTTTCA  43 84
HC661_RS10965 NONE
HC661_RS10960 2246057 .. 2246076 -  -3.7  -4.03234   CTTCTTGCACACAAA            TCATATA ACACAG TATATGA             ATAAATGAGTCATAG  59 125
HC661_RS10955 2245403 .. 2245428 -  -8.9  -5.40072   TTTCGCTTAAAAAAA         GACGGCCGCTG AAAA CAGCTGCCGTT          TCAAATCTTTTTTAT  95 37
        gudB 2243956 .. 2243977 -  -8.1  -5.38047   CACTCATATAAAAAA           TCTCCTATA TTAT CATAGGAGA            TTTTTTTTGTTTATG  93 53
        ypdA 2242902 .. 2242925 - -12.6  -5.01732   AATTTTTTTAAAAAA          GAGCATATGA ATGA TCATATGCTC           TCTGCACCCAGCCGT 100 16
        prsW 2242137 .. 2242161 - -16.5  -5.31456   TCAAGGCATAAAAAA          GAAACCGCACG CGA CGCGCGGTTTC          TTCACACTTGGATCA 100 27
        sleB NONE
        ypeB 2239757 .. 2239778 -  -9.5  -5.64006   ATGTAACGAAAAAAA           GGAAAAGAC TTTA GTCCTTTCC            TCCTTTATTTTTATA 100 36
HC661_RS10925 NONE
HC661_RS10920 NONE
HC661_RS10915 2237943 .. 2237966 -  -7.6  -4.01902   ATATGTATTAAAGAA          TCATCCAAAA AAGA TTTTGAATGA           TCAATAAAAAGTTTT  73 129
        rpsA NONE
HC661_RS10905 2235608 .. 2235627 -  -7.8  -5.41787   TAAAAAACAGAAAAA            GGCATGCG GGTT CGCATGTC             TTTTAACGTCTGCTG  93 28
HC661_RS10895 2234680 .. 2234696 -    -8  -4.25256   TCGTTATGAAAAGAA              CCCTTC AAACA GAAGGG              CTTAACTCATTTATT  77 114
        engA NONE
HC661_RS10885 2232011 .. 2232039 - -11.9  -6.28401   GAAAAAACAAAAAAA        CTGAAGCAAAG AGGGGGA CTTTGCTTCAG        TCAAGTTGACTATAT 100 213
HC661_RS10880 NONE
HC661_RS10875 2230917 .. 2230949 -  -2.8  -5.79588   TCAAAATCAAAAAAA      CCTTTCTCCC TATTTGTATGCGC GGGAAAAAGG      TTCATTCCTGTTTCG  85 27
      spoIVA 2229258 .. 2229274 -  -4.3  -4.59954   AAGAATAAAAAAAGA              CCCCCCG TTT CAGGAAG              AGGTCCTTCAGCTTA  69 38
         hbs 2228554 .. 2228581 - -17.2  -2.60615   AGGCTGCTTAAATAT        GAAAAGCCCCTT TATC AAGGGGCTTTTC         TGTGAAGAAACAAAG 100 78
        folE NONE
        mtrB 2227573 .. 2227589 -  -2.1   -2.8433   TAAAAAAAAGAAATT              GGCTGTA TTC TCCCGCC              GTTTGCGGGCATTTG  41 63
HC661_RS10850 NONE
        menG NONE
        hepT 2224976 .. 2224986 -  -3.2  -3.48064   CTGACAATTAATCAA                 TCCA GGG CGGA                 GAATGTTCACATCTT  50 56
         ndk 2224340 .. 2224355 -    -9  -5.80364   ATTTCAATAAAAAAA              TCAGCC CGCG GGCTGA               TTTGTGAGAAATGAA 100 120
HC661_RS10830 NONE
        aroC NONE
HC661_RS10820 NONE
        aroH 2220622 .. 2220645 - -12.6  -4.73677   CGTATAAGAAATAAA          CCCAAAAGAA AGGC TTCTTTTGGG           CAGAATAAAAACGTG 100 158
HC661_RS10810 NONE
        trpD NONE
        trpC NONE
HC661_RS10795 NONE
        trpB NONE
HC661_RS10785 NONE
HC661_RS10780 2213528 .. 2213548 -  -9.8  -3.93262   TTTTAATAGAGCAAA            GAGGTGAT GCCTG ATCACCTC            TTATAATATTTCAGC  83 26
HC661_RS10775 NONE
        aroA 2211068 .. 2211089 - -10.9   -5.5353   CACATGAAGAAAAAA           GCCCGAAGA ATCG TCTTCAGGC            TTTTTTGGCTAATTG 100 20
HC661_RS10765 NONE
HC661_RS10760 2208856 .. 2208876 - -11.2  -3.67597   CTCTTTACGCAACAA            GCCTTGCA TATTC TGCAAGGC            TGTCATTTATGTGAG  88 32
HC661_RS10755 2208347 .. 2208366 -    -5  -3.10879   AGCAAGGTCAACAGA            GGCAAAAC GGGT GTTTTGCG             GGATGCCTGGTGTTT  53 41
HC661_RS10750 2207444 .. 2207464 -  -3.2  -3.87346   ATCACAATGACTAAA            CTTGCACC CCAAT GGTGCATA            CCCCTTACAATCTGC  54 302
HC661_RS10740 2206206 .. 2206222 -    -8  -5.48825   TATCATGCAAAAAAA              GCTGAC ATCCG GTCAGC              TCTTTTCATAAAAGT  93 70
HC661_RS10735 2205475 .. 2205485 -  -3.2  -4.49337   TAAGAGCAAGTAAAA                 GACA GAT CGTC                 AGCTTTCGTTTCATA  64 107
HC661_RS10715 NONE
HC661_RS10710 NONE
        mgsA NONE
       bshB1 NONE
        bshA NONE
HC661_RS10690 NONE
HC661_RS10685 2196715 .. 2196734 -  -4.4  -3.75402   TCGCAAGCAAAAAAG            CCTTCTGTA AAA TA-AGAAGG            ATCCCCACTTGTTTA  56 189
        panB NONE
HC661_RS10675 NONE
        panD 2194551 .. 2194565 -  -8.5  -5.10163   AATCTTAAAAGAAAA               CCCCC ATGAA GGGGG               CTCTTTTACAAAATC  90 31
        dinG 2191645 .. 2191660 -  -7.5  -3.81951   TCCCACACCACGAAA              GCCGC GTTTAT GCGGC               TTTTATTCCGTTTGG  71 28
HC661_RS10660 NONE
HC661_RS10655 NONE
HC661_RS10650 2189619 .. 2189635 - -12.3  -4.29845   CAATGCAAGTGAAAA              GCGGCTT TAA AAGCCGC              TTTTTCAGAATCAGC 100 36
        asnS 2188184 .. 2188201 -  -7.7  -4.87665   CTTTACTTAGAAAAA             GTCTCCC TTGC AGGAGAC              TTCGTTTTTTAAAAC  86 43
HC661_RS10640 NONE
         nth NONE
HC661_RS10630 2186236 .. 2186256 -  -8.3  -5.71712   TTTCATACAAAAAAA            CCTCCTTAT GAG AAAAGGAGG            TTTTTAACCTTTGTT 100 29
HC661_RS10615 2181675 .. 2181687 -  -4.1  -5.24531   ACGCTTGATAAAAAA                TTAGG CGG CCCAA                ACCGCCCTTCCACGT  78 86
HC661_RS10605 2181152 .. 2181162 -  -2.4   -3.1733   TTTTGCATAAAATCA                 GCTG ATC CGGC                 AGGCTCTCGGCAAAT  43 12
HC661_RS10600 2180721 .. 2180746 - -15.5  -4.52589   CCCCTTTATATAAAA         GAAGGCAGCCG TTTT CAGCTGCCTTC          TTTTTCAATTTCATC 100 14
HC661_RS10590 2179861 .. 2179892 - -11.8  -5.00616   TTTTTCCCTAAAAAA      TAAGCATGAATGAT GGAT ATCATTCATGCTTT       TTATTTGAAGATACT 100 26
HC661_RS10580 2178786 .. 2178804 -  -8.1  -5.88565   TGTACAAGAAAAAAA             GCAGGGA ATCAG CCCCTGC             CTACTTCATTTTTAT 100 26
HC661_RS10575 NONE
HC661_RS10570 2175108 .. 2175118 -  -3.2   -3.3334   AACGCTATTTTACAA                 GATG CGG CACC                 ATTCTACAACAAAAT  48 109
HC661_RS10565 NONE
HC661_RS10560 2174585 .. 2174606 -    -8   -5.0133   CACCTGCTTAAAAAA           TGGGGCTCC CCATC GG-GCCCCA           TTTTGATTTGCTGAT  88 72
HC661_RS10555 NONE
        gpsB 2173605 .. 2173629 -  -5.1  -3.96148   CTTGTTCATTATAAA         GCAACTTGTC TCATTT GACAAGT-GC          ATCTGCCCTATTCGT  61 33
        rnpB 2173151 .. 2173170 -   -10  -4.68724   TCATTCAAGATAAAA            GCTCCCCT TTAA AGGAGAGC             TCTAATTTGTCATAT  93 56
HC661_RS10540 2171688 .. 2171705 -  -7.1  -3.39897   GCACAAACTACAACA             GATATTC GATC GAATATC              CATCTTCACAAAATT  65 258
HC661_RS10530 2171361 .. 2171375 -   -10  -5.94214   AATACAACAAAAAAA               CTTGGC CTC GCCAAG               TTTTTGCCATTATCA 100 38
HC661_RS10525 2169333 .. 2169356 - -13.2  -5.08824   CCCGGATTTAAAAAA          GCCGCAGGAT AAGA ATCCTGCAGC           TTTTGTTTTTATACG 100 34
HC661_RS10520 2167452 .. 2167487 - -13.4  -6.28401   TAAAAAATAAAAAAA    GCATTGCCCGCTCTCC AAAA AAAGAGCAAGCAATGC     CGAATGATCTACACG 100 289
         xpt NONE
HC661_RS10510 2165427 .. 2165471 -  -9.6  -4.28187   AAATAATAAATGAAA GAGGATGCCTCACAAAAAGTTC AGC AAAC-TTTCG-GAAGCATCCTC GATCTCGGGATTTCA  89 87
HC661_RS10500 2163940 .. 2163956 - -10.9  -6.08342   CAAGAAACAAAAAAA              GCATCTG AAG CAGATGC              CTTTTTTCAATCGAT 100 149
HC661_RS10485 2161703 .. 2161721 -  -7.4  -4.79756   CATATAACTGAAAAA             CCTGCC GATATAT GGCAGG             TTTTTTTTACATATT  83 32
        fbpC 2159140 .. 2159166 -    -8  -5.72622   CTGATAAAGAAAAAA         CATCCGCGGC AGGAAAA ACCGCAGATG         TTTAAGAAGACATCG 100 27
HC661_RS10460 NONE
HC661_RS10455 NONE
HC661_RS10450 2154821 .. 2154847 - -10.9  -5.41746   AAGGCGGTAAAAAAA         CAGCATCCCCC CATTT GGAAGATGCTG         CCGTCACGTTTACTC 100 35
HC661_RS10445 2153863 .. 2153892 - -10.7  -4.77629   AAAAGCAATACAAAA       CGCTAGAGGGATC AGCT GATCTCTCTGGCG        TTCAGCTTTTCGAGC  93 7
HC661_RS10425 NONE
HC661_RS10420 2151642 .. 2151666 - -15.9  -4.67904   GATGAATTCGAAAAA          TAAAACCGCAG AAG CTGCGGTTTTA          TTTTTTATTGATTTG 100 30
HC661_RS10410 2150650 .. 2150681 - -11.6  -5.61913   AATAAAGATAAAAAA      TA-GGGAGCGGCCGC TTG ACGTCCGCTCCCATA      TGGTGTATAGTTGAA 100 387
HC661_RS10385 NONE
HC661_RS10380 2146885 .. 2146911 -  -2.3  -3.08992   ACTTATTCTAACATA        GTCGGCACAA GCGTTCTA TTGCGCCG-C         TTAGCTTTTGCAAAT  42 26
HC661_RS10375 2145689 .. 2145703 -  -7.8  -5.67283   AATTCAAATAAAAAA               GGTGCA TGG CGCACC               TTTTTGTTATAACTG 100 32
        ilvD 2143706 .. 2143753 -  -7.3  -5.38047   CATTGACATAAAAAA GCCCCCTCTA-AA-ATCCTTA TATGAAGT CAAGGATACTATAGAGGGGGC CGGAATTCAATTGTT  93 53
HC661_RS10365 2143246 .. 2143262 -  -9.4  -5.26119   TCTCCAAAAAGAAAA              TGCCCG GAATT CGGGCA              TTTCAGCAGTGCGCA 100 28
HC661_RS10360 2142442 .. 2142465 -    -6  -4.90266   CTGATTAACGAAAAA          GAAGCCCATG ATAT CATGAGCTTA           CATGGATGACACCGA  82 15
HC661_RS10355 2141535 .. 2141562 -  -6.4  -5.64304   TAACACAATAAAAAA        TCATTTCTGCAA AATT TCTCAGAAATGA         TTTTTTTATTTCTTC  95 47
HC661_RS10350 NONE
HC661_RS10345 NONE
HC661_RS10340 2139537 .. 2139562 - -14.1  -5.28942   TATCTGAAATAAAAA         GCACAGCCTCT CTAT AGAGACTGTGC          TTTTTTTATGCACGG 100 31
        ilvA NONE
HC661_RS10320 2136035 .. 2136074 -  -3.7  -5.67063   TTCATCATAAAAAAA TTCC-C-GCACCCTCCCTT ATCA AAAGGAAGGCGCTAAGGAA  TATGCACCGTTAGGC  85 35
HC661_RS10315 NONE
HC661_RS10310 NONE
HC661_RS10305 2133957 .. 2133980 -  -8.2  -5.21709   GCTGACACGAAAAAA          CACAAATCCC TGAA AGGATCTGTG           TTTTTTTTTATGAAA  91 43
        msrA NONE
        msrB 2132378 .. 2132420 -    -4  -6.38492   ATGAAGAAAAAAAAA CATAGAAAAAAGGCCTGTCT GAT AGGCAGGCCTCATTGCTGAG CTCTATTTTTCAAAT 100 28
HC661_RS10270 2128236 .. 2128246 -  -2.6  -3.36515   TTCTATTCTGAAATA                 TATT TAT AATA                 CTCTTGGATTTTCGG  46 2
HC661_RS10265 NONE
HC661_RS10260 2125879 .. 2125895 -    -8  -5.37043   ATTTCATACAAAAAA              GCTCTC AAAAA GAGAGC              TTAACTTTGCAATAC  93 47
HC661_RS10245 2123587 .. 2123607 -  -7.6  -2.68305   TTAAAAATTAATTTA           GCCCTACTC ATAT GAGT-GGGC            TTTTTATTTTATGAT  59 34
HC661_RS10230 2121275 .. 2121286 -  -2.2  -4.41047   ACCGCTTAAGGAAAA                CACC TGAT GGTA                 AAGAGCGTTGACTCT  59 257
HC661_RS10215 2119723 .. 2119746 -   -11  -3.01924   TATGTTTGTTCAATA          TGCCGCTTCA GTTT TGCAGCGGCA           TTCCTAGGAATTACA  78 51
HC661_RS10210 2119137 .. 2119149 -  -4.7  -3.33009   CAAAATGTCGCAGAA                GCCGC TTT GCTGC                AAGAGGTGACGCATG  52 109
        phyC 2117278 .. 2117295 -  -9.9   -4.8048   TCTTCACATCAAAAA             GCAGCTT GGAT AAGCTGC              TTTTTTCATGTTTAT  93 37
HC661_RS10185 2115319 .. 2115341 -  -2.6  -5.63645   GTAAAACATAAAAAA           CGGCTCCG AAAGAGA CAGAGCCT           GATATCCGTTATTAA  81 37
HC661_RS10180 NONE
HC661_RS10175 2113151 .. 2113165 -  -4.2  -2.94099   TCTTCTTACGATATA               CGGCAT TGT ATGCGG               GCCAACTCCCAATTG  47 59
HC661_RS10170 2112923 .. 2112951 - -11.1  -5.24796   TGGATATAACAAAAA        GCCTGCAGAAA GTGATGT TCTCTGCAGGC        TAATTTTCATTATAG 100 54
HC661_RS10165 2112252 .. 2112280 - -11.8  -4.07885   TACCTTTCTGTAAAA       CAGGCTGCCG-GA GATG TCGCGACAGCCTG        AAGAGCGTTCTGGAA  91 141
HC661_RS10160 NONE
HC661_RS10155 NONE
HC661_RS10150 NONE
HC661_RS10145 NONE
        ablB 2107325 .. 2107341 -  -2.3  -2.90496   CTTCGGCTGAAACCA              TTTGTTT GTC AAACGAA              TTCCTCCTTATGAAT  41 17
        ablA NONE
HC661_RS10130 2105638 .. 2105651 -  -2.4   -4.5028   ATTACAACAAAAGAA               GACT AGGAGA AGTC                AAAATAATTCCGTTT  61 14
HC661_RS10125 2105319 .. 2105333 - -11.4  -5.80817   TTCAACAGAAAAAAA               CCGCAC AAT GTGCGG               TTTTTCGTCAGGCGT 100 33
HC661_RS10120 2104692 .. 2104708 -    -3  -3.43411   CAAAATGGCAAAAAC             CGCAACA TGCT TGT-GCG              TTTTTTCACTTACCA  46 138
HC661_RS10115 2103735 .. 2103745 -  -4.6  -3.24256   ACTTTTAAAAACAAG                 CCCC GGA GGGA                 GAAAAGATGATGACG  51 172
HC661_RS10105 2103432 .. 2103451 -  -5.7  -5.09225   AGCTGATTGAAAAAA            CCGAAGC TTTTTC ACTTCGG             TTCCGCAGTTTCAGT  81 36
HC661_RS10100 NONE
HC661_RS10095 2102364 .. 2102394 - -15.5  -3.31726   CTTTCCCAGACAATA      CGGAAGCCGGCTGA AGAT TCAGCCGGCC-CCG       TCTTACCTCGGCTGG 100 28
        deoD NONE
HC661_RS10080 2100445 .. 2100470 -  -7.6  -4.67607   CTGGTAATAAAGAAA         GCCCGCTT TCTATTTTTC AAGCGGGC          TTCTTCTTATTACAC  83 35
HC661_RS10065 2097800 .. 2097838 - -16.9  -3.34398   GGCTTTTCGCAAACA   GAAAACACCCAATGCGC GAGCG GCGCATCGGGTGTTTTT   TACTATTTCATATTC 100 28
HC661_RS10055 2095322 .. 2095349 -  -5.5  -4.89339   AATTACTGATAAAAA        GCCGGCTTCAC ACAACG GTGAAGCCTTC         CCTTTTTACACCTTT  79 39
HC661_RS10050 2093713 .. 2093732 - -10.7  -3.12341   CTTAACAGAAAGAAG            CCGGCAC GTAAAT GTGCCGG             TTTTTTACTTTTTCC  79 30
HC661_RS10035 NONE
HC661_RS10030 2090266 .. 2090293 - -16.4  -4.56883   GTAAGATGAAAGAAA        CCCTTAGTCCGC TTAA GCAGACTAAGGG         TTTTTTATAGGAATC 100 30
HC661_RS10020 2089154 .. 2089170 - -13.7  -4.73613   TGATCATTAAGAAAA              GGCTGCC TTG GGCAGCC              TTTGTTATTCATCAC 100 30
HC661_RS10005 2087854 .. 2087874 - -11.8  -5.80817   TTTAAGATAAAAAAA            CGGCCCGC GCGAT GCAGGCCG            TTTTTTCTTTAATAA 100 34
HC661_RS09990 NONE
HC661_RS09985 NONE
       bshB2 2084981 .. 2085006 - -13.4  -5.71712   TCTGACACAAAAAAA         GGGATAAGGC ATTTCA GCCTTATCCC          TTTTTTTATCAGTCT 100 34
HC661_RS09965 2081805 .. 2081820 -    -4  -5.10968   ATCAATACAGAAAAA              GGTAAA GATG TTCACC               TTATTAATATTAAAT  74 65
HC661_RS09960 2080495 .. 2080520 - -13.3  -5.73672   AAACAATCAAAAAAA         GCCCGCTTCCT TTAA AGGAAGCGGGT          GACGGCTGATTACAG 100 35
HC661_RS09955 2078951 .. 2078962 -  -3.6  -5.95539   TGGTAAACAAAAAAA                GCCC CGAA AGGC                 TTTTTTTAAAAATAA  90 31
HC661_RS09950 2078269 .. 2078295 -  -6.6  -5.23316   GAGTATACTAAAAAA         GCCCTTGTATAC TCA ATACAAAAGGGC         TCATTCCCTGCGGGC  89 26
HC661_RS09945 NONE
HC661_RS09940 2075387 .. 2075411 -  -7.9  -4.93595   ATAAAAAGCGAAAAA          GCATAGGAAAA AGC CTATCCTATGC          TTTTATGAAGCAGTT  86 15
        sucA NONE
        odhB 2071033 .. 2071058 -  -9.1   -5.4505   TCTCTCAATAAAAAA         GTACACTGC TTGTAAGG GCAGTGTAC          TTTTTGTCTGTCTCA  95 43
HC661_RS09925 2070230 .. 2070265 - -14.8  -3.23274   GTTTTCATAACTGAA    CAAGGATAGGATAGGC TGCT GCCGCTCCTATCCTTG     TTGATTCTGCAGATC 100 17
HC661_RS09915 2067681 .. 2067701 - -14.7  -5.14563   CGCTTTATTAAAAAA            GCCCCCGTC TTG AACGGGGGC            CTGCTTCTTTTGGTT 100 40
HC661_RS09895 2062966 .. 2062977 -    -3  -4.18197   ATGGCTCAGGCAAAA                TGAA TTCA TTCA                 GCTTTAAACTTCTTC  57 29
HC661_RS09890 2062739 .. 2062761 - -11.2  -5.24129   TTTCGCCATAAAAAA           CCGCGGCTTC TCC AATGCCGCGG           TTTCAACAAAACATC 100 39
HC661_RS09885 2062099 .. 2062124 -  -7.5  -5.25699   ATTATATAATAAAAA         GGCCATCCGCA TGCA TTCGGATGGCT          TTTATGTGATATTTA  90 38
HC661_RS09870 2060960 .. 2060973 -  -8.1  -4.64676   GTACGGTGAACAAAA               CGGTG ATTG CACCG                TTGTCGTCATCCCTA  81 89
HC661_RS09860 2060340 .. 2060359 -    -2  -2.95204   GGAGGCTGAAACAAC            GGGGTCAA TGCT TTCTCCCC             CTGATGGTGACATTG  42 10
HC661_RS09855 2059742 .. 2059763 - -11.7   -5.8187   TATGGAATAAAAAAA           CAGGTACAT ATGA ATGTACCTG            CTGCTATTATTGTGA 100 32
HC661_RS09850 2058962 .. 2058988 -  -8.7   -5.5208   CTATAATAGAAAAAA         CTCTCACACCC TGTAG GGGCGCAAGAG         TTAATGGAAATTAGA  95 36
        ssrS 2058577 .. 2058599 -  -9.9  -5.49568   AATTCAAAATAAAAA           GCCATCTCC GCAAG GGAAATGGC           TTTCGCTACGTATGC 100 24
        recQ 2056627 .. 2056642 -  -4.7  -3.53761   TAAGTCTTGCTGAAA              CCTTG ATACAG CAAGG               GTTTTCAAGCTTCTG  54 95
HC661_RS09835 2055564 .. 2055590 - -12.4  -5.83226   AAGGGAAGAAAAAAA         GAACACAAAGCA TTT CGCCTTGTGTTC         TTCATCTCTATATGA 100 43
HC661_RS09830 2055030 .. 2055049 -  -7.1  -4.22927   GCATTAATACATAAA            GACGGGA AAACCG CCCCGTC             TTTTTATTTTGACGC  76 29
HC661_RS09815 2052469 .. 2052491 -  -9.8  -4.62471   CTTAAGCCCTAAAAA           GACCGGGTGT TTG AGACCCGGCC           TTTCGTCATATTATG  91 36
HC661_RS09810 2051799 .. 2051815 - -11.5  -5.49569   CATCAATAGAAAAAA              GCCGCGC AGA GCACGGC              TTTTTTTAATAATAC 100 31
        czrA 2050524 .. 2050538 -  -5.7  -3.53697   ACCAAACCAATAACA               GTCAG TACGG CTGAC               ATCCCTGTCTAAAAA  58 54
HC661_RS09790 NONE
HC661_RS09785 NONE
HC661_RS09780 2047718 .. 2047732 -  -2.1  -3.49295   TACCAAAAAAAGAAG               CAGTT TATTT AACCG               ATTTTCAGGATTATT  47 36
        csaA 2047312 .. 2047333 - -13.1  -4.28254   CCTCAATACGCAAAA           GACGTTTGC TTCT GCAAACGTC            TTTTTTTATTATCCG 100 34
HC661_RS09770 2045195 .. 2045205 -  -2.6  -3.10244   CCTTTGAATAAATCA                 TTTA ATT TAAA                 CACCTCAATTCTCAT  44 30
HC661_RS09765 2044712 .. 2044728 - -10.9  -3.97406   TGAAAATCTGATAAA              GCTCTCT AAA AGAGAGC              TTCTTTTATTAATCG  88 34
HC661_RS09750 2043394 .. 2043416 - -13.5  -3.15027   AGCTGCCATGAAAAG           CGGGAAGAG TTTTT CTCTTCCCG           TTTATTAAGATTCGC  93 30
HC661_RS09735 NONE
HC661_RS09730 NONE
HC661_RS09725 2036788 .. 2036807 -   -15  -5.43866   GAAGCTGTAAAAAAA            CGCCCCGA ATTT TCGGGGCG             CTGCTGTTAAGAAGC 100 32
HC661_RS09710 2034774 .. 2034794 -    -9  -6.09196   GCGAAAACAAAAAAA            GACCCGTC ACGAA GACAGGTC            CCCTTTTGTTTAAGG 100 35
         rtp NONE
        proC NONE
        proB 2031925 .. 2031958 -  -7.5  -5.54885   AATATCAATAAAAAA     CAAACCCGA-GCTTCA AAA CGAAGCCTCGGGCTTT     TTCATATTTTTATAG 100 48
        gltB NONE
        gltD 2024775 .. 2024792 - -12.7  -4.87626   TTTCAATACGAAAAA             CCGGCTG ATCC CAGCCGG              TTTTATAAATAAACC 100 48
HC661_RS09665 2022230 .. 2022243 -  -2.4  -2.78935   ATACGCTTTATTATA               TCGT GATTTT ACGA                TATGTCAATGTTGTT  41 45
HC661_RS09660 2021886 .. 2021911 -  -9.1  -4.86385   AGTCGGAAAAAGAAA         CTGAATCCCTC TTCT AAAGGATTCAG          CCCTACATTTCGCGC  90 28
HC661_RS09655 2020560 .. 2020588 - -14.7  -4.31815   AAATGACAAGACAAA        GCCTCGTTTCTCA AGC TGAGAAATGAGGC        TTTTGTTTATTCTGC 100 32
HC661_RS09645 2018281 .. 2018301 -  -8.4  -5.91981   AAAATGCAAAAAAAA            GACACAAT ATGAA ATTGTGTC            CTAGTCTTCATCTTT 100 26
HC661_RS09630 2015448 .. 2015472 -    -5  -5.75342   CTTCTCTAAAAAAAA          CATCGCCC GTATGAATT GAGCGATG          TGCGGTAAAACCTTA 100 38
HC661_RS09625 NONE
        dacB 2012879 .. 2012901 - -16.4  -5.60864   CAGACATCAAAAAAA           GCCGAATCCT CTA AGGATTCGGC           CCTTCTTATTGATTT 100 31
HC661_RS09615 NONE
HC661_RS09610 NONE
HC661_RS09605 NONE
HC661_RS09600 NONE
HC661_RS09595 NONE
HC661_RS09590 1974282 .. 1974311 - -10.1  -5.67283   AAGGGAAAGAAAAAA       GTCCTAAAGCG AATCAAAA CGCTTCAGGAC        TTTTTATGTTTCATG 100 19
HC661_RS09580 NONE
HC661_RS09575 NONE
HC661_RS09570 NONE
HC661_RS09565 NONE
HC661_RS09560 NONE
HC661_RS09555 NONE
HC661_RS09550 1964794 .. 1964832 -   -11  -5.04987   AAGACTGTGAAAAAA   GACTGCATAAGAGCGGCT GCG AGCCGGATCTATGCAGTC   TTTTTTTATTTATAC  93 35
HC661_RS09530 NONE
        bioA NONE
        bioF NONE
        bioD NONE
        bioB NONE
HC661_RS09505 1956116 .. 1956136 -  -4.7  -4.79683   AATCGAGAAAATAAA            GCAAAAACA TGC CGGTTTTGC            ACAGTTTCTGAGGCT  72 247
HC661_RS09500 NONE
HC661_RS09495 NONE
HC661_RS09490 NONE
HC661_RS09485 1952377 .. 1952395 -  -8.8  -5.64274   TCAGGCATAAAAAAA             CAGCCGTT CAG AGCGGCTG             TTTTTAAAAAAATAT 100 46
        fabD NONE
HC661_RS09475 1938681 .. 1938694 -  -3.9  -2.50607   TTTAAAGAAATAATG               CTTTT CCCT AAAAG                TTCAATTGAATAGAA  44 19
HC661_RS09470 NONE
HC661_RS09465 1914568 .. 1914593 -  -9.7  -5.06414   CCTTTTTAATAAAAA         CGCCGCTGA GTGCCAGG CCAGCGGCG          TTTTACACTTGATCA  93 42
HC661_RS09460 NONE
HC661_RS09455 1911359 .. 1911396 - -13.1  -4.52589   CTCTCCCACAGAAAA   TAAGCCAATTTTCTT TATTGAGT AAGAAAATTGGCTTA    TTGCGATGCTGATGC 100 43
HC661_RS09450 NONE
HC661_RS09445 1909118 .. 1909144 - -11.7  -5.31545   AACAATAGGAAAAAA         CGGTTCTGTTA TTAAT CAACAGAACCG         TTTTTTTTGTATAGC 100 43
HC661_RS09435 1906852 .. 1906875 - -12.5  -4.55023   TTTAAGATGATAAAA          GCGGACATC GTTGCT GATGTCCGC           CTAAACTTAACTAAT 100 36
HC661_RS09365 1892091 .. 1892111 - -16.9  -5.85244   AATTAAAATAAAAAA            CCTCCGCTC ATT GAGCGGAGG            TTTTACTATTTAGCT 100 185
        plsY 1886101 .. 1886115 -  -2.8  -4.13945   ATTTTGATGTCAAAA               TTGAAG TTT CATCAA               AACCATTTGATCTTC  57 22
HC661_RS09340 1885709 .. 1885727 -  -8.9  -5.75945   AGGCTGTAAAAAAAA             GAACGCA TCCGC TGCGTTC             TTTTTTTCTTACACG 100 34
        sspO NONE
HC661_RS09295 1880336 .. 1880350 -  -5.7  -5.63504   AATGGCACAAAAAAA               CAGAC ACGGG GTCTG               TTTTACATATCGTGG  93 28
HC661_RS09290 1879851 .. 1879878 - -12.1    -5.626   GACCGGACAAAAAAA        GCCGCTTCCAT TGAGGG ATGAAAGCGGC         TTTTTTATGTTATAG 100 35
HC661_RS09285 1879187 .. 1879207 - -11.2   -4.4773   TCAGATGAATTAAAA            CCTTTCCG TCCGC CGGAAAGG            TTTTTTATTTGAGCA  93 30
HC661_RS09265 1877051 .. 1877075 - -10.2  -4.84761   ACATGGTTATAAAAA          TAAAAAACCC GGAGA GGGTTTTTTA          TTTTGGCGTCATGTT  93 34
        lexA 1871838 .. 1871852 -  -7.8  -5.81412   TTTATGCAAAAAAAA               CCCCTC TTT AAGGGG               TTTTTTACAATAAAT 100 55
HC661_RS09220 1870487 .. 1870512 -  -6.1  -5.67529   AAGCAAAAATAAAAA         GAGAAGGAGGC GATT GCCTCCTTTTT          ATGTTTTTTCCTGAG  95 24
HC661_RS09195 1864898 .. 1864940 -  -6.3  -5.24531   ATTCGGTATAAAAAA CAGGATCATACCCGCCC GATAGAAAA GAGAGGAGATGATCCTG ATATTGAGACCCTAT  87 37
HC661_RS09190 1864576 .. 1864595 - -10.7  -5.34365   CCATAATAAGAAAAA            CACCCGG AGTTTA CCGGGTG             TAAAAATGTTGATAT 100 16
HC661_RS09185 1863765 .. 1863784 -  -9.3  -5.47218   GTCCAGTTAAAAAAA            CTTGCGG GCGCTG CCGCAAG             TTTTCTCCGTATTAA  95 37
HC661_RS09175 1862592 .. 1862628 -  -9.5  -3.97443   AAAAGGGGAAAAACA    GCAGAGCGCCATAAACA TTT CATTTATGGCGCCGTAC    GATCATGGAGGTGCT  86 71
        adhP 1852467 .. 1852491 -   -10  -3.86684   AGAATCGAGATCAAA          GGCTGCCG TATCATTCC CGGCAGCC          TTAATGATTAGGAAG  84 33
HC661_RS09105 1850368 .. 1850389 -  -9.5  -5.18355   TTTAAAAAGTAAAAA           CGCCATAAA ACTT CTTATGGCG            TCTGTCCGAACTAAG 100 81
HC661_RS09085 1842698 .. 1842715 -  -6.3  -5.88565   CCTAGAATAAAAAAA             CCCATCT TTAA AGATGAG              CGTAAAACATAGAAG 100 51
HC661_RS09070 1837691 .. 1837713 -  -9.8  -4.16307   CCCTTAATAAAAAGA           CCAGGGTGTT GGT ATCACCCCGG           CTCTGTAATAAAAGC  89 216
HC661_RS09015 NONE
HC661_RS09010 1827068 .. 1827098 -    -9  -5.64873   TTCAATAACAAAAAA      CCCCGTTCGTCCC AAAAAA GGGA-GAGCGGGG       GTTTTTTCATTTAGT 100 36
HC661_RS08960 1819873 .. 1819890 -  -6.9   -4.9725   AGGCCTATATAAAAA             GGCCCCC GGGG AGGAGCC              TTTTTGATTCGTCAA  84 37
HC661_RS08955 NONE
HC661_RS08950 1818698 .. 1818733 -  -6.8  -3.53012   GCGGCCGGCTGGAAA    CGGCTGTGTCCATTCC TAAG GAAATGGACGGACCCG     GAGAAGGCACAAATC  61 371
HC661_RS08930 1815804 .. 1815833 - -18.7  -4.62069   TGTTCACCTGAAAAA       CGGAGTCATCTGC AGGT GCAGACGACTCCG        TTCTCATGATAAAAA 100 42
HC661_RS08925 1815267 .. 1815284 -  -7.7   -5.9003   AAACCAATAAAAAAA             CGCCGCTG ATT CAG-GGCG             TTTTTTCTTTTTATT 100 36
HC661_RS08910 1812488 .. 1812504 -  -7.2  -5.62219   AAGACATTAAAAAAA              CCCCCG ATAAA CAGGGG              GGCGATATTAAAATC 100 33
HC661_RS08840 1739491 .. 1739507 -  -2.3   -3.0318   TAACACAGGATAAAT              TTGTTAA ACA CCAACAA              TAGTCCCGTTTAAAG  42 35
HC661_RS08835 1739192 .. 1739214 - -11.3  -3.09933   CCGCAAGTTAGTCAA           GGGGGACTA GTAAT TAGCCCCCC           TTACATTTAGTTCTT  82 32
HC661_RS08825 1736515 .. 1736542 -  -6.5  -3.73106   CCAAAAGGGGAAGAA        GCTGAACTGATT GAAGA AATCA-TTCAGC        AGGTGCTTGACGCCA  63 310
HC661_RS08200 1608655 .. 1608679 -   -10  -5.31456   TGAACGCATAAAAAA          CGCCTGCC GCATAAAAG GGCAGGCG          TTCATTTTTGCTTAT 100 37
HC661_RS08110 1589196 .. 1589232 - -16.8  -5.49234   ATACGTAATAAAAAA    CACCTCCAAGCTGA GTGCGGGTT TCAGCTTGGAGGTG    CGTTTATTTTTTCAG 100 29
HC661_RS07855 1531170 .. 1531196 -  -9.2  -3.67175   AGCCTGTAAAATGAA         CCGGCCTGGGGG CGG CGGCCCGGCCGG         TTTTTTATTATGCCG  76 33
HC661_RS07835 1528229 .. 1528249 -  -8.3  -4.99134   AGCTGAAAGTAAAAA            GCACCTG ATACAGA CAGGTGC            TTTTTTTACGCATTC  90 31
        ylbJ 1524999 .. 1525028 -  -7.9  -3.89617   ATGCAGAAATTTAAA       GGATGAGAAGC GCTGATTG GCGTCTCATCC        TTTTTTTGTCCGTGC  73 20
HC661_RS07775 1519887 .. 1519907 -  -9.8  -5.52384   GTCTCATGAAAAAAA            GTACAGCA GAATA TGCTGTAC            TTTTTTATTACATTT 100 33
        ctaA 1512602 .. 1512625 - -13.9  -4.70659   TTTTATATGTAAAAA          GGCCGAAGC TCTAAT GCTTCGGCC           TTTTCATGTGCCTCA 100 38
HC661_RS07715 1505619 .. 1505637 -  -5.3  -3.30124   GCTTATGTTGTAGAA             CGGTTTA AAGAA CAAACCG             TCTCCGGCAGCGTGA  54 91
HC661_RS07705 1503569 .. 1503598 - -14.3  -4.53439   CCAAAGGGAAAGAAA       GCAGCGCCC-TTCC TTT GGAGCGGGCGCTGC       TTTTTACCGGCGGTT 100 29
HC661_RS07700 1503254 .. 1503276 -  -4.1  -5.80364   ACCGCAATAAAAAAA          TGACCTTGCC TTCC GGCG-GGTCA           TTTTTTATTCGGTTT  88 39
HC661_RS07685 1500659 .. 1500679 - -14.1  -5.39721   TGAGGATATAAAAAA            GCCTGAATC TTT GATTCAGGC            TTCATAAGATATTGT 100 79
HC661_RS07680 1499772 .. 1499793 - -10.8  -5.47218   GCTGATTTAAAAAAA           CGCCCGGC TGAATG ACCGGGCG            TTTTAATCCGTTTAC 100 37
HC661_RS07655 1494839 .. 1494860 - -14.5   -5.4251   TTCAGATATAAAAAA           GAGACCGGA TTTC TCCGGTCTC            TTTTTTTGTTTACAA 100 35
HC661_RS07635 1492362 .. 1492382 - -11.8  -4.12901   CAAAATGTAGACAAA            GCGAGCCG GCAAT CGGCCCGC            TTTTTATGTTATGAG  91 34
HC661_RS07625 1490394 .. 1490437 - -11.8  -4.93316   GAAGAAGAGTAAAAA GCGTAAAAAGGCCCGAAACG ATTT CGTTTCGGGCTTCTTTATGT TTATTGGATGGCTTT 100 26
HC661_RS07610 1488704 .. 1488731 - -15.6  -4.70117   AATGCAACAAAGAAA        CAGCCCCCGTTT GTAA AAGCGGGGGCTG         TTTTTATTGTGCAAG 100 29
HC661_RS07535 1428458 .. 1428483 - -11.8   -4.0825   GGCGCAATGAAACAA         TTGGCCGGCC ATAGCA GGCCGGCCGA          TGTCATGGTGTATAA  91 43
HC661_RS07530 1427807 .. 1427828 - -14.5  -5.18866   TTGAAATAAAGAAAA           CCGGCACTT TGGG AAGTGCCGG            TTATTTTTAACGGTC 100 32
HC661_RS07520 NONE
HC661_RS07515 1424764 .. 1424784 - -11.9   -5.7946   GCTGCAATAAAAAAA            CTGCACTCA TTA CGAGTGCAG            TTTTTTTTAGACCTC 100 32
       mreBH NONE
HC661_RS07480 1418075 .. 1418094 -   -10  -5.05505   AGCACAAACGAAAAA            GACACAGC TTTT GCTGCGTC             TTTACGGGTGATTCA  93 27
HC661_RS07475 1416737 .. 1416754 -  -8.4  -5.96894   AGCGAAATAAAAAAA             GGAGGC CTGATC GCCTCC              TTTTTTTATTAAAAT 100 34
HC661_RS07460 1413625 .. 1413654 -   -10  -5.58522   CAGACAAAATAAAAA       CGCCGCGCTGCCC GATTT GGACAGCA-GGCG       TTTTTTATTTGGCAA 100 30
HC661_RS07385 1399688 .. 1399708 -  -9.7  -4.99972   ATAAAACAGTAAAAA            CTGCTTGCG TTA CTCAAGCAG            TTTTTTTGCGCTTTC  93 14
HC661_RS07370 1397044 .. 1397074 - -12.1  -4.75404   AAATTTCATTAAAAA      GAAAAAACCGAAGC TTAC GCTTCGG-TTTTTC       TATTCGGCGGAAGCG 100 25
HC661_RS07295 NONE
HC661_RS07290 1385157 .. 1385174 -  -2.8  -4.24342   CGTTCCATTAACAAA             TAAGAT CTTTCT ATCTTA              TAATAGTCACCCTTG  57 18
HC661_RS07285 1383758 .. 1383785 -  -9.2   -4.9218   TATTGATTATAAAAA        TACGCCTTTTTC TGAT GAAAAGGGCGCA         TCTTTTTCCTTTATT  90 39
HC661_RS07280 1383176 .. 1383196 - -13.3  -5.48063   ATTGAATAGAAAAAA            GCCGATGCA TAA CGCATCGGC            TTTTTTGCGGCGGAA 100 41
HC661_RS07270 1381837 .. 1381865 -  -2.5  -5.60993   TCTTTCAGAAAAAAA        TAAGACAACCA GCTGAAA TGATTGTCTTC        ATTGTATCATGATCT  81 68
HC661_RS07265 1380518 .. 1380536 - -10.3  -5.72254   CGAAACAATAAAAAA             CAACGGC GTTAT GCCGTTG             TTTAAATAGTCTGCA 100 27
HC661_RS07250 1375230 .. 1375249 - -12.2  -5.63517   GGGTGAAATAAAAAA            GATTGCCC GCAG GGGCAATC             TTTTTTATTATTTAT 100 37
HC661_RS07170 1357299 .. 1357314 - -10.4  -4.63184   AATTCATTTGAAAAA              GCTGCC GGGC GGCAGC               TTTTGTGCGGGATAT  91 68
HC661_RS07135 1351931 .. 1351953 -  -3.5  -5.64421   ATCCGAAAGAAAAAA           TGCCTAT CTAAAGATC ATAGGCA           TTAAATATTATTATC  83 257
HC661_RS07100 1344389 .. 1344414 - -10.4  -5.85425   GAAAGAAACAAAAAA         GCGGCTCCCC GCGAGG AGGGAACCGC          TTTTTTCTTATTGTG 100 33
        motA NONE
        motB 1342648 .. 1342670 - -10.6  -5.73978   ATCAGAAATAAAAAA           GGAAGCCATT CTG AAAGGCTTCC           TTTTTTATATTACTG 100 35
HC661_RS07080 1340458 .. 1340474 - -10.1  -5.63517   TCTTTAAATAAAAAA              CACCCCG ATC CAGGGTG              TTTTTTTCATCGAGA 100 32
HC661_RS07045 1334099 .. 1334125 - -19.6  -5.41143   TACGCCCGAAAAAAA         GCCTCCTTCTCT GAA AGAGAAGGAGGC         TGAAACAGTGCAGTC 100 291
HC661_RS07040 NONE
        mtnA 1331744 .. 1331774 - -11.2  -5.71712   GTGCAGACAAAAAAA       CCGCTGACATTGCC TGA GGCAATATCATCAG       CGGTTTTTCAGCTCA 100 33
HC661_RS07020 1327512 .. 1327541 - -13.7  -5.72254   GCAAACAATAAAAAA       TACCTCTTAGGCG ATAA CGCTTAAGAGGTA        TTTTGCATTATTTCG 100 33
HC661_RS06995 1323276 .. 1323295 - -12.8  -5.90981   GTACAGCAAAAAAAA            CCCCGGCG CAGA CACCGGGG             CGAAGAAGCGTTATG 100 43
HC661_RS06990 1322951 .. 1322972 - -12.3  -4.53036   CGATAAATATCAAAA           TTCGCCGAG AAGT CCCGGCGAA            TAAGCTGCATTATTG 100 35
HC661_RS06965 1317704 .. 1317714 -  -2.4  -3.23692   CAGCACCATGATTAA                 GACG TTC CGGC                 TTTTTGTCTGGTCGT  43 11
HC661_RS06960 1315846 .. 1315868 -  -9.9  -4.24948   GTATCAGACTGAAAA           GAGCTGACA AAAAG CGTCAGCTC           TTTCTCTTGATTTGC  89 19
        tnrA 1313526 .. 1313547 - -10.1  -5.60993   TGCTTTATAAAAAAA           GTCCGTCTC ACAG GAGGCGGAC            TTTTTTTTATCAGCG 100 35
HC661_RS06910 NONE
HC661_RS06905 NONE
HC661_RS06900 1306739 .. 1306766 - -13.4  -4.88495   ACATACATAACAAAA        CAGGCTGCCGAA TCAC TCCGGCGGCCTG         TTTTTATACAAACAA 100 29
HC661_RS06890 1304371 .. 1304396 - -16.3  -5.49234   AGATGTAACAAAAAA         GCCTCTTTCTC ATGA GAGAAAGAGGC          TTTAACTTCAAAATG 100 341
        metE 1302012 .. 1302038 - -15.9    -5.252   CACGCCCAGAAAAAA         CAGCCACCCGC GATTT GCGGATGGCTG         TTCTTTTTTTATACA 100 34
HC661_RS06875 1299927 .. 1299940 -  -5.2  -2.64878   TTATAAACCAATTGA               GCGG GTTATA CCGC                TGTTTTTGATTTCAT  49 144
HC661_RS06870 1298702 .. 1298726 -  -6.5  -5.26875   GTCTCAATTAAAAAA         GGATCA-GCG GACAAA CGCCTGATCC          TTTTTTTGCATGTTC  87 43
HC661_RS06855 1296397 .. 1296421 -   -13  -3.43651   AAATAACCGAACGAA          TATCCCGGAT TTTAT ATCCGGGATA          TTTTATTAACGAAAA  93 265
HC661_RS06845 1295364 .. 1295390 - -15.3  -5.22006   GCAGCAGAATAAAAA         TAAGGATGCCC ATTCG GGGCATCCTTA         TTTTTTGCCGTGCAG 100 23
HC661_RS06800 NONE
HC661_RS06795 1286910 .. 1286937 -   -10  -5.38047   CATTTATACAAAAAA        GAAAGCTGAC AATATAAA GTCAGCTTTC         TTTTTTAATTAAACC 100 34
HC661_RS06740 1274096 .. 1274148 -  -7.1  -4.96848   GCCCTCATAGAAAAA CACCTCCAAGTCTAATTTCGGAT AATAACG ATCCGTTTTCAAACTTGAAGGTG TTTTTTGTTTGTCTC  85 78
HC661_RS06735 1272886 .. 1272917 -  -2.8  -5.36441   GCTGTATATAAAAAA      TCCAAGGCGGCGGG ACTG CCCCCCGTTTTTGA       GACAGGGGTCAAAAC  78 46
HC661_RS06730 1272555 .. 1272578 - -13.2  -3.75332   ATGTCTTAACCGAAA          CACCCTGTCC GGCC AGACAGGGTG           CTTTTATGTCAGAAA  95 83
HC661_RS06710 1266619 .. 1266639 -  -6.8  -5.93809   TTGCCAGAAAAAAAA            CGGCTCCC GTAAA AGGAACCG            TTTTTGTCAGTTTTT 100 32
HC661_RS06705 1265716 .. 1265732 -  -4.5  -3.08201   TAATATCGTTAAAAG              TAATAGA GTA TCCATTA              TAACCCCTCGTTACG  49 36
HC661_RS06700 1264706 .. 1264725 - -12.2  -5.93809   CTGTCACAAAAAAAA            CCGCTTCT GTAA AGAAGCGG             ATGTCATCAGAAAAA 100 32
HC661_RS06695 NONE
HC661_RS06690 1263461 .. 1263493 - -10.6  -5.45652   AGCTTTAACAAAAAA      GGCTGAGTCCCG TTCACATTG CGGGATTCAGCC      TTTTTTCTTTTTTAA 100 242
HC661_RS06505 1235911 .. 1235923 -  -2.6  -5.01553   AAGCGAGAAAGAAAA                GCCC TGATC GGAC                TTTGAATCAATTCCC  70 112
HC661_RS06500 1235245 .. 1235261 -  -4.3  -3.08046   CTCCGATGTCAAAAT              GCTGACA CTC TGCCGGC              GGAGAATCGCTAATT  49 35
HC661_RS06485 1233225 .. 1233245 - -11.1  -4.78572   CTGTAATCAATAAAA            CGGAAGCTC TCC GGGCTTCCG            TTTCTTCTTACATAC  93 33
HC661_RS06465 1230143 .. 1230177 - -12.9  -5.56673   ATGCAGAACAAAAAA     TCCGCCAGCCTGC TGTTATGTC GCAGACCGGCGGA     TGGCCGGATTATGAT 100 34
HC661_RS06460 1229175 .. 1229227 -  -7.1  -4.96848   GCCCTCATAGAAAAA CACCTCCAAGTCTAATTTCGGAT AATAACG ATCCGTTTTCAAACTTGAAGGTG TTTTTTGTTTGTCTC  85 75
HC661_RS06455 1227965 .. 1227983 -  -2.3  -5.63517   TTCCCAAATAAAAAA             GCGATCC TGTAG GGACTGC             CCCCCGTTTTTGAGA  80 59
HC661_RS06390 NONE
HC661_RS06385 NONE
        fetB 1212719 .. 1212751 -  -6.2  -2.50387   GTTCACAAAAGAATT      GCAGCAGGCATTCG AAAAA CAAGTGCTTGCCGC      CGCAGTCGGCAAAGT  50 184
HC661_RS06370 1211671 .. 1211699 -  -9.6  -3.93984   AAATTGATTGAGAAA       CAGGCAGCGCACC GGAA GACG-GCTGCCTG        TTTTGTTATATGTTT  83 31
HC661_RS06345 1204841 .. 1204855 -  -9.2  -5.52384   TGTCTATGAAAAAAA               CGGCCC GGG AGGCCG               CTTTTTTTGCGTTAT  95 37
HC661_RS06340 NONE
HC661_RS06335 1204123 .. 1204145 -  -9.8  -5.77853   AACGGGCAAAAAAAA           GACGCCGGTT ATC ATCCGGCATC           TTTTTTATACTTTCA 100 30
HC661_RS06330 1203809 .. 1203834 - -14.1  -3.12668   GGTCAAAGTTGAATA         GCAGACAGG-GG AAG CCTCCTGTCTGC         GGTCATTTCTTTTCA  95 45
HC661_RS06320 1202249 .. 1202266 -  -5.5  -3.86206   ACCACCAAATAAACA             GCCCG CCAGTAAT CGGGC              AATTCTTCTTGTTAC  61 499
        lacG 1197891 .. 1197915 - -10.9  -2.92449   TAAAGACGGCACACA          TGATGAAAAGA GAC TCTTTTCACCA          TGTATGATCATTAAA  78 36
HC661_RS06295 NONE
HC661_RS06290 NONE
HC661_RS06285 NONE
        galE NONE
        galT NONE
HC661_RS06270 1190955 .. 1190976 -  -9.5    -5.252   CAGCCTTATAAAAAA           GCAGGCTGCA CAA TG-AGCCTGC           TTGAGATTCGCATCA 100 42
HC661_RS06265 1190188 .. 1190217 -  -4.3  -4.99638   AGAGGGATATAAAAA       GGCAGCCC-G TTTTCATGGGG CAGGGCTGCC       TATGGTTTTATTCAT  74 43
HC661_RS06260 1188642 .. 1188658 - -12.3   -4.2828   TTTCATTCATTAAAA              CCCTTGC TGC GCAAGGG              TTTTTTACTTTAAAA 100 47
HC661_RS06205 1179532 .. 1179550 -  -5.3  -4.48997   GAATTAATAAAAGAA            GCCCTTCT TATA AGA-GGGC             TCTTTTTCTCTAACT  71 39
HC661_RS06180 1177065 .. 1177081 - -12.3  -3.65313   GAATCATAGCCGAAA              CCCTTGC GTA GCAAGGG              TTTTTTACTTTGCCT  90 277
HC661_RS06165 1174218 .. 1174230 -  -3.4  -5.42198   TTTTAAAAAATAAAA                GCAA TACTT TTGC                TTAAGACTCTTTAGG  79 26
HC661_RS06160 1173704 .. 1173723 -  -2.2  -3.36112   TTAAAAAAGAGGGAA            TTAAAGTC CTAC AACCTTAA             AATAACATTAAATTA  45 156
HC661_RS06155 1172886 .. 1172914 - -10.4  -5.25699   ACCACACAATAAAAA       GA-CCCCTCACAA ATAA CTGTGAGGGGGTC        TTTTTTGATTTACAA 100 336
HC661_RS06130 1168178 .. 1168195 -  -8.3  -2.78547   GGAGTTGACGAAGCA             GGGCGGC TAAT GCCGCCT              TTTAGTTTCATTCGT  66 77
HC661_RS06050 NONE
HC661_RS06045 1157680 .. 1157690 -  -3.2  -2.94333   TTTGAAAATCAATTA                 GGAA CCT CTCC                 TTTTTATTTTTTATT  45 29
HC661_RS06040 1156946 .. 1156962 -  -9.4   -4.0257   TTTAAAAATGAAGAA              GACGCC TTACG GGCGTC              CTTTTTGTATTAACT  86 140
HC661_RS06030 1155884 .. 1155904 -    -9  -5.21709   CTGCATACGAAAAAA            GACGCCGA TCTAT TCAGCGTC            CTCTTCTCCGGCTTC  93 14
HC661_RS05995 NONE
HC661_RS05990 NONE
HC661_RS05985 1147227 .. 1147252 - -11.9  -5.61596   ATTTTCATAAAAAAA         GCACTCCTGCC ATAT AACAGGAGTGC          TTTTGATTTTATCGT 100 34
HC661_RS05980 NONE
HC661_RS05975 NONE
HC661_RS05970 1145383 .. 1145408 - -11.8  -3.70444   ACGTAATAAAGAAGA         CCGGCGCTCC CATTAC GGAGTGCCGG          CTTTTTTTATCTCTT  89 32
HC661_RS05955 1141868 .. 1141893 - -19.1  -3.32844   CTTTTTATGTGAGAA         GAACCCGGCAG TGAT CTGCCGGGTTC          TTTATATCCTGAGTG 100 27
HC661_RS05930 NONE
HC661_RS05925 NONE
HC661_RS05920 1138771 .. 1138809 - -13.4  -4.39426   CATATGCGGAGAAAA   TAAGAAAAAGCAGAGC ATTTTTA GCTCTGCTTTTTCTTT   TTAGAGGACGAGGGT 100 26
HC661_RS05915 NONE
HC661_RS05910 1137538 .. 1137564 -  -5.2  -5.04175   TTAACCATACAAAAA        GCTGCCTGAAT TCTTTC ATCC-GGCAGC         TTATTTTTATGCTTT  79 46
        prpE 1127606 .. 1127631 - -11.2  -3.76775   TTGAACACATGTAAA         GCCCG-AACCG TTTGC CGGTTTCGGGC         TTTTTTTCATGCCTG  88 32
HC661_RS05830 NONE
HC661_RS05825 1123435 .. 1123460 -  -6.1  -5.41143   CACTCCGCAAAAAAA         CCAGAGGGG GAAGGAAG CCTCTCTGG          TTTACGCGTAATACT  91 27
HC661_RS05820 1122832 .. 1122847 -  -2.6  -2.58544   GCTCATGCTGATAAT              TCG-TCA ATA TGATCGA              TCCTCCGCTTCTGAC  41 13
HC661_RS05815 1121909 .. 1121930 -  -4.3  -5.93809   TTTGCACAAAAAAAA           GCCGGCTCC GTAA GGAATCAGC            TTTTTTTAATGATCA 100 31
HC661_RS05810 1121454 .. 1121476 -   -12  -5.15969   TCGTAATTCAAAAAA           GCCTGTGCAT TAG ATGCGCAGGC           TTTTTCTAAAATCCC 100 31
HC661_RS05790 1116456 .. 1116479 -  -8.2  -4.71382   ATAAGCATGGAAAAA          GCCCAAAACCA TCG CGGTTT-GGGC          TTTTTGTTATTTTTC  84 32
        trpS 1106505 .. 1106526 -   -13  -5.29385   AAGTGAACTAAAAAA           GAGGCGGG GATTCT CCCGCCTC            TTTTCTTTATCTTCT 100 32
HC661_RS05695 1095883 .. 1095904 -  -8.7  -4.58283   GAATCTCGGCAAAAA           CACGGTGCT GACA AGCACGGTG            CAAAACGTAGATAAA  87 462
HC661_RS05670 1093212 .. 1093227 -    -9  -5.80817   GTGAACACAAAAAAA              CCTGCT GAAT AGCAGG               TTTTTTTATTTAATG 100 35
        fosB 1080520 .. 1080541 -  -2.3  -4.92757   TCAGTAATAAGAAAA           TGCACCT CGGATTTT AGGTACA            TCCTAAAGTTTGGAG  67 127
HC661_RS05600 NONE
HC661_RS05595 NONE
HC661_RS05590 1077976 .. 1078004 -  -6.6  -5.67283   AAGTGAAATAAAAAA       GCGGCGCCCTCGT CTAA ACG-GGGCGCCTT        TTTTTATTGCAATTT 100 29
HC661_RS05575 NONE
HC661_RS05570 1075466 .. 1075496 -  -5.5  -5.62045   ATATAGAACAAAAAA      CAGCCCTC-TATCT TCAT ACACAAGAGGGCTG       TTTTGCTTTTACAGA  93 34
HC661_RS05545 1069530 .. 1069548 - -10.4  -6.04953   AGAGAAATAAAAAAA             GTCTTCTT AAG AAGAAGAC             TTTGTAATCATTTGT 100 268
HC661_RS05540 1067606 .. 1067627 -   -13  -4.77036   TCGTACCATGAAAAA           GCCGCCTG TCATAT CAGGCGGC            CTCTTTCGCGTCAAT 100 36
HC661_RS05535 1067077 .. 1067104 - -12.8  -3.20164   TGACATTCAAGGTAA        TGCCCTTAGAGA CATG TCCCCAAGGGCA         TTTGTCTGTTTCAGG  85 36
HC661_RS05530 1066172 .. 1066182 -  -2.4  -3.12327   CCGGTACATTCAACA                 TGGC CTG GCCG                 AATTCCTTTTATCGA  43 134
HC661_RS05525 1065615 .. 1065637 - -14.2  -5.27477   ATTCGAAGTAAAAAA           GCAAAGGCCC GGG AGGCCTTTGC           TTTTTTATGATTCGT 100 30
HC661_RS05515 1063115 .. 1063143 -  -8.2  -5.37345   CGCAAGCATAAAAAA       CGCCCG--GCTTCA TAA CGAAGCTTCGGGCG       TTTATGCAATCCCTT  93 27
HC661_RS05500 1059689 .. 1059721 - -16.3  -3.32895   ACAAAGCTAAATACA      TCAGGCGGCACCTAT TTA AAAGGTGCCGCCTGT      TTGTTACGCGGTGCC 100 29
HC661_RS05480 1057621 .. 1057641 -  -2.5  -3.96999   TTAGACGTAAAAACA            CCGGC GCTTTACGCAT GCCGG            GTCTTATACATAAAT  55 67
HC661_RS05475 NONE
HC661_RS05470 NONE
HC661_RS05465 1056373 .. 1056385 -  -4.1  -3.25166   TCACTGTAAAAATCA                TGACG GAT CATCA                CCTTTCATTTCACCA  48 10
HC661_RS05460 NONE
HC661_RS05455 NONE
HC661_RS05450 1055514 .. 1055540 - -11.7  -4.41895   AACGCTGAACCAAAA        GCAGCC-CTCTT CTGA AAGAGCGGCTGC         TTTTTAGGCGTTTCC  95 29
HC661_RS05420 NONE
HC661_RS05415 1041862 .. 1041890 - -14.7  -4.19735   TGCTCGAAAAGTAAA        CCCCATTCTCTCA TGT TGAAAGAACGGGG        TTTGTCAGCGGTCTG 100 78
HC661_RS05410 NONE
HC661_RS05405 1039859 .. 1039894 - -11.8  -5.58209   GCAAACGCAAAAAAA    GCTCCGGAGATGGGTG AGTG CACCCTACTCCGAAAC     CTCGCCCGCTTTTCC 100 14
HC661_RS05400 1038526 .. 1038543 -  -9.9  -5.63517   TGTTCAAATAAAAAA             CACGCAT ATGG ATGCGTG              TTTTTTTATTCGGAT 100 40
HC661_RS05375 1034619 .. 1034632 -  -3.8  -4.69549   AACTGAAAAGGAAAA               GCAG TCCCGG CTGC                TTTTTAAATGGTCGC  69 29
HC661_RS05370 NONE
HC661_RS05365 1032853 .. 1032866 -  -5.2  -3.09834   TATCTTACCATTTAA               GCCG CCTTTT CGGC                TGCGCTGATTTGTTT  53 8
HC661_RS05360 1032463 .. 1032484 - -13.1  -6.02919   TGAGAAATAAAAAAA           CAAGCCTCT TTAA AGAGGCTTG            TTTTTTTAAATGGAT 100 31
HC661_RS05350 1031249 .. 1031271 - -10.6  -3.73775   GGGACCCTCACGAAA           CGCACGATGT CAG AAATCGTGCG           TTCGGAATTCTTTAT  83 37
HC661_RS05325 1028381 .. 1028400 - -12.2  -5.55698   GATAATGTAAAAAAA            GCCAATCC ATAT GGATTGGC             TTATTCACTCTGTTT 100 26
HC661_RS05315 1025843 .. 1025859 -  -6.6  -5.55855   GCGAAAAAAATAAAA              CCATTC GTACA GAATGG              TTTAGTTAATCTTGG 100 31
HC661_RS05305 1023736 .. 1023752 -  -2.3  -3.05844   GGCTGTATCTGAATA              TGATGAT GTA ATCATGA              TGACTAAAATCAGCT  42 35
HC661_RS05300 NONE
HC661_RS05295 1021246 .. 1021258 -  -3.4  -3.05844   GCCGTTACGTTAACA                CTTC AAAGA GAAG                CGCCAGTCCGACTCC  45 2
HC661_RS05290 1020581 .. 1020602 -    -8  -4.57341   AATGCTCGCCAAAAA           GGCCCAAA ACTGAA TTCGGGCC            TTTTTGTTATGATTC  82 32
HC661_RS05280 1019269 .. 1019280 -  -4.4  -3.23854   AGAACAACCAATAGA                CAGA TTAT TCTG                 TGGATTAATTGTATA  51 146
HC661_RS05275 1018040 .. 1018064 -  -9.2  -6.04419   AAAATAATAAAAAAA         CCGGCG-GGGC CATG GCCGACGCCGG          TTTTTTTATGTTTTA 100 38
HC661_RS05265 1016194 .. 1016212 - -14.6  -4.29396   AATGACGGACGAAAA             GCGAAGCC GGG GGCTTCGC             TTTTACATGCTGATC 100 44
HC661_RS05240 1011711 .. 1011745 - -20.8  -5.02074   TGACGGCCGAAAAAA     CGGGCGCCGCACAACT TAG AATTGTGCGGCGCCCT     ATTGTCACATATCCT 100 30
HC661_RS05235 1010191 .. 1010218 - -15.6  -5.26316   CGATGGCATAAAAAA        CCCTGCGCGGAA ATCA TTCCGTGCAGGG         TTTTCATTTTAACCT 100 34
HC661_RS05225 1008751 .. 1008774 -   -11  -5.80364   ATTTTAATAAAAAAA          CCCAACCAGC ATCC GCTGTTTGGG           GAGCATGAGAAATCT 100 68
HC661_RS05220 1007647 .. 1007674 - -11.2   -5.2291   ACAGCATAAGAAAAA        GAGGCTCTGAGC AGAT GCTCGGGGCCTC         TTTTTTTAGATTTCG 100 53
        hmoB  998068 ..  998084 - -13.7  -5.21709   CGGGACATTAAAAAA              GCCGGAG AAT CTCCGGC              GGTTTTCAGTCTATT 100 31
HC661_RS05180  996522 ..  996534 -  -3.3  -3.11222   CGTTAACGTCAAAAG                CGATG CCC CCTCG                TCTGCTTTTCCCATG  46 78
HC661_RS05175  995294 ..  995320 - -12.3  -3.02459   CATTTAAGAATCACA         GCAGCCGGTAC GTAAT GTACCGGCTGT         TTTTTATGCCCTATC  84 36
HC661_RS05155  991664 ..  991682 - -11.8  -5.47218   CCGGACGCAAAAAAA             CCTCATCT TTA AGATGAGG             CAAGCCGTTTTCTGA 100 15
        serC  990411 ..  990433 -  -3.5  -4.57569   CGATGGCCGGAAAAA           TTGATATGC AAACA GTATATCAA           AGGAACCGTTATGTT  64 50
HC661_RS05145  989786 ..  989805 - -12.2  -5.28755   AAACACATTAAAAAA            CCTCTTCC GGCC GGAAGAGG             TTTCGGTATGCGGTT 100 39
HC661_RS05135  989051 ..  989074 -  -5.3  -5.82388   AAACCGCAAAAAAAA          GTGCGGA ACGCAATATG TCCGCAC           TTTTTTTGGTTGTAT 100 47
HC661_RS05130  988150 ..  988186 -    -3  -4.59773   CTGGAGTCGCAAAAA   GCGCAAGG-CTTTGTGA CGTT TGACAAGCTCCTTGCGC    TTTTTGCGGGACAGC  65 144
HC661_RS05120 NONE
HC661_RS05115  986899 ..  986933 - -17.2  -5.84381   TTATTAAGAAAAAAA     TATGGCTGTCGGGGGT CAG ACCTCCGTCAGCCATA     TTTTTTTGCCTGTTT 100 39
        prsA  985550 ..  985577 - -12.1    -5.626   CATCGCATAAAAAAA        CTGTGC-GGCTC GCCGA GAGCCCGCACAG        TTTTTTTATTTAGAT 100 31
HC661_RS05065  977511 ..  977530 -  -8.6     -3.67   TTAACCGGTAAAATA            CAGAAGCC GGAA AGCTTCTG             TTATCTGTGGAATAA  73 26
HC661_RS05055  976180 ..  976190 -  -3.2  -5.30686   AATATTCATAAAAAA                 TCCC TCC GGAA                 TATACTGTTTTTACA  76 36
HC661_RS05050  975681 ..  975694 -  -3.8  -2.95943   CATAAACAGATCACA               CTCC GTCTCT GGAG                AGGAAGTCTTGGATC  47 7
HC661_RS05045  974426 ..  974448 - -12.8  -5.40072   TCCCGCTCAAAAAAA           CTGACCCCTT ATG AAGAGGTCAG           TTTTTTTATGATTTC 100 31
HC661_RS05025  968743 ..  968758 -  -3.2  -3.97042   TTATGATCAAGTAAA              CGCAGA TGAA TCCGCA               AAACGCATGTTTGAT  58 301
HC661_RS05010  965595 ..  965608 -  -6.7  -3.04398   TGTCTGCTGTAAAAG               CGGAA CTTC TTCCG                TTTTTCGGCTCGGGA  59 514
HC661_RS05000  964419 ..  964440 -  -9.4  -5.34655   GAAGGAAAAAGAAAA           GCCCAGCC TGGTGC GGCTGAGC            TTTTAGCTTTCAGTC 100 35
HC661_RS04995  963977 ..  964000 - -14.6   -4.4009   GGTGACGGCATAAAA          GAAGACGCGG TATC CCGCGCCTTC           TGTAAGCCATTTATT 100 44
HC661_RS04990  963111 ..  963132 -  -8.7  -3.66178   CGGTGTAATCGGAAA           GGGTGAATC TAAA GATTCGCCC            ATTTTTTCATTCAGT  73 36
HC661_RS04975  958373 ..  958392 -  -7.9  -5.42259   GGAGCTGTAAAAAAA            GCAGCTT TTGATT AAGCTGC             TTTACAGAAAGAATT  93 39
HC661_RS04965  957092 ..  957110 - -11.7  -5.11033   CATAAGCTGAAAAAA             GGCCGGA ACACA TCCGGCC             TTTTTACTTCAGTCA 100 38
HC661_RS04955  955097 ..  955119 - -10.6  -5.71712   CGCGACATAAAAAAA           GCCGGATC ATATACA GATCCGGC           TTTTCTTATTCATGG 100 31
HC661_RS04935 NONE
HC661_RS04930  951618 ..  951639 -  -2.9  -2.57211   ACCCGCTGCGATAAG           CATCAGGAC AATC GTCATGGTG            TATCATGCCCTCTTC  41 18
        crcB  951246 ..  951270 -  -7.2  -3.23274   TGCTTCATAACGCAA          CCTTGAGC GAAAAATAA GCTCAAGG          TTTTTTTAAATGGAT  63 31
HC661_RS04905  946523 ..  946549 -    -6  -3.51597   AATGTCCAATTAGAA        CCTTCA-CTTC TTTTGG GAAGATGAAGG         TAACACCTCCTGTTA  62 54
HC661_RS04900  945147 ..  945174 -   -15  -5.72207   TGTAAATGAAAAAAA        GCTTGC-CGTCTG TAT CAGACGCGCAAGC        TTTTTTGTTATGCTT 100 33
        sigM NONE
HC661_RS04885 NONE
HC661_RS04880  942430 ..  942451 - -10.1  -5.44119   TTCATTTTAAAAAAA           CAGGCCCCC GTAA AAGGGCCTG            TTTTTACGTTTAAAA 100 35
HC661_RS04855  936124 ..  936141 - -11.3  -4.18367   TAGCAGAGATAGAAA             CCCGTTC ATCA GAACGGG              TTTTTTATTTAGACG  93 64
HC661_RS04845  933420 ..  933443 - -18.2  -4.67697   CTGTAAAAGAAGAAA          GGATGCGGGG AAAC CCCCGCATCC           TTTTTTTATTTTCCG 100 31
HC661_RS04835  930286 ..  930312 -  -8.7  -5.53288   CTTAACTCAAAAAAA         TACGTGCGCTC CTTCT GAGCACACGTT         TTTTTCGTTAAGACA 100 33
        nsrR  929733 ..  929754 - -11.7  -5.93809   CCGGCATAAAAAAAA           GAAGGAATG CGGG CATTCCTTC            AGCTTCTGAGCAGTC 100 24
HC661_RS04825  928080 ..  928108 - -13.2  -5.45726   CAGACTGTAAAAAAA        GCTGCACAGCCT TATTG AGGCCGTACAGC        TTGTCAGATATCAGA 100 36
HC661_RS04815  927292 ..  927312 - -16.9  -4.54553   CACAAACATAAGAAA            TCCCGGCGT CTG ACGCCGGGA            TTGTTTTATGTCAGC 100 31
HC661_RS04745  911728 ..  911747 - -13.6  -5.39681   AGAACGAAACAAAAA            GCGCTGTG CTGA CACAGCGC             AAAAAAGAATTTCAC 100 436
HC661_RS04730  908614 ..  908653 - -12.3  -5.59357   AGCATATGAAAAAAA  GAAAACGGCGTTGGAGA GTCAGG TTTCCAACGCCGTTTTT   TAATCAATGGAGGTT 100 29
HC661_RS04715  906427 ..  906452 -  -9.9   -5.1166   CACTAAAACGAAAAA         TCCTTCA-TCGT TGA ACGAATGAAGGA         TTTTTTTGTTTCTAA  93 37
HC661_RS04705  903470 ..  903482 -  -9.1  -4.88687   GGAAACAAAAAAGAA                CGCCT ATC AGGCG                GCGGAACATGCTGAC 100 317
HC661_RS04695  902309 ..  902332 -   -16  -5.58454   TTTAGATGAAAAAAA          CCCTGCCGGC GTAC ACCGGCAGGG           TTTTTAAACAATTTA 100 38
HC661_RS04600  885277 ..  885292 -    -9   -5.0538   TTTTATGTGAAAAAA              GACACG AAGG CGTGTC               TTTTTATGAAAGCCA  90 29
HC661_RS04590 NONE
HC661_RS04585  884263 ..  884286 -  -8.1  -5.15969   TGGTAACGTAAAAAA          CTCCGGATC TGTCAT GAACCGGAG           TTTTTGCCGTGCTTA  88 13
HC661_RS04550  877152 ..  877172 -   -14  -5.61913   AATAAACAGAAAAAA            CCTGCCGG GCAGA CCGGCAGG            TTTTTTGATGTTATT 100 36
HC661_RS04515  869673 ..  869711 - -12.7  -4.75472   CTTATATCAATAAAA   GAAAAGATGAAGATGGA GTTTG CCCATCTTCATCTTTTT   TAGAAAAACGGTGAA 100 25
HC661_RS04485  862627 ..  862638 -    -3  -4.21631   AAGTTATGGAACAAA                TGAA CATA TTCA                 GTGTTACTAACTAAA  57 91
HC661_RS04380  853030 ..  853077 - -10.7  -5.42198   TTCCAAAAAAGAAAA CCACTAAACGAAGCTGACCGC TTTGAT ACGGTCAGCTTCGTTTATTTT ACACTGTTTTTTCTG 100 19
HC661_RS04365  850515 ..  850547 - -22.9  -4.89393   CAAATCGGACAAAAA      GAACAAGCGGAAGCC CCG GGCTCCCGCTTGTTC      CAGCAGTTATTTTTT 100 32
HC661_RS04360  849206 ..  849233 - -15.6  -5.00642   GAACTGATACAAAAA        CGTATGCCGTCC GAAT GGGCGGCATACG         TTTTTTTGAATGCAA 100 69
HC661_RS04330  844981 ..  845000 -  -9.3  -4.56597   GGCCGCCTGTAAAAA            GCGTCAG TCATAG CTGACGC             GAGTGCCGTGGCCAT  88 9
HC661_RS04320  842659 ..  842689 - -11.9  -4.73682   TGTGAGAAGACAAAA       GAAGCCCGGCTCT TAAAC AGAGCCGAGCTTT       AATTTTTTCTGCAAT 100 7
HC661_RS04285  836346 ..  836364 - -11.7  -5.75342   TTTCCGCAAAAAAAA             GACCGGG TCATT CCCGGTC             TCTTACGGTGTGTGT 100 42
HC661_RS04280 NONE
HC661_RS04275  834937 ..  834964 -   -15  -5.25772   AAAGGATAACAAAAA        GCTTGCAGG-GGA TAT TCCGCCTGCAAGC        TTTTTTCATTGTTTC 100 31
HC661_RS04255  831461 ..  831473 -  -6.3  -3.56378   CTTCAAAACAGAATA                CCAAT AGG ATTGG                CTTTTATTTCCGTTT  62 41
HC661_RS04250 NONE
HC661_RS04245  831028 ..  831053 - -13.3  -5.47399   CGAACTGTAAAAAAA         TCCCCGTCTCT ATAC AGAGGCGGGGA          TTTCGTATTAGCGGG 100 33
HC661_RS04225  826126 ..  826146 - -10.4  -5.95539   TGTCAAACAAAAAAA           GGCC-GCCG ATAC CGGCAGGCC            TTTTTCACCTCTATC 100 36
HC661_RS04220  824270 ..  824282 -  -6.2  -4.15565   TTCATGATTCCAAAA                CCGC CGCTT GCGG                GGATGCGCTTGAGCT  69 199
HC661_RS04200  820906 ..  820923 -  -9.8  -5.42862   ACAGTCTGAAAAAAA             GGCGGC GTTTCA GCCGCC              TTTTTTGATACGGAA 100 17
HC661_RS04185  818400 ..  818424 -  -8.6  -3.48766   CTCAGAACGTAAACA         GGCGGCT-TGC AGAT ACAGAGCCGCC          CCGTTTTGTTTATGC  72 35
        corA  794060 ..  794078 -  -7.4  -5.75342   TTTTCTCAAAAAAAA             GAACAGCC GGC AGCCGTTC             TTACTTGAAAATATT 100 26
HC661_RS04080 NONE
HC661_RS04075  792427 ..  792451 - -11.5  -4.36914   CGCGCCTGTAGAAAA          CACCTCTCC TGGTAAT GGAGAGGTG          TTTTGTTATTTCAGG  93 31
       yfkAB NONE
HC661_RS04055  789218 ..  789241 - -11.1  -6.04953   AGATAAATAAAAAAA          GCTGATTCC GGTTCG GGAATCAGC           TTTTTTGTGTGTGAT 100 21
HC661_RS04040  785922 ..  785945 - -14.6  -4.12254   TACCACTAGAAAGAA          GCCGCCTGAC TTAG ATCAGGCGGC           TTTTTTTATGAGGAC 100 31
HC661_RS04020  783696 ..  783718 - -12.7  -5.22039   TTTAAATCGAAAAAA           GACCCGCCG TTTTT CGGCAGGTC           TGACATGGGTTTATT 100 36
HC661_RS04015 NONE
HC661_RS04010 NONE
HC661_RS04005  780411 ..  780454 - -15.5   -4.4195   AGAGAGGGGAGAAAA TGACA-AAGCGCCGGAAGAC GGATT GTCCTTCGGCGCTTCTGTCA CAATAGGTTATTCAA 100 33
HC661_RS04000  779282 ..  779307 - -11.8  -4.66537   TTGCGTAATATAAAA         GCGGAGCGCC GTATCA GGCGTTCCGC          TTTTTTTGTGAAGAT 100 13
HC661_RS03990  774185 ..  774211 - -13.1  -4.99035   GGACCGAGAGAAAAA         GCTCCCCTGAT ATCAG ATCAGGAGAGC         TTTTGGGATGAACCG 100 60
HC661_RS03985 NONE
HC661_RS03980  772113 ..  772137 - -12.8   -5.5208   GTATAAGATAAAAAA          GGCTGCCGGG CGTGT CCCGGCAGCT          TTTAACGTTTATTCG 100 27
HC661_RS03955 NONE
HC661_RS03950 NONE
HC661_RS03945  765923 ..  765936 -  -3.7  -5.21709   CCGCATATTAAAAAA               CGCCG GGAT CGCCG                AGGATGAGGGCGCGC  79 244
HC661_RS03935  763555 ..  763578 -   -14  -5.47159   GCTGAACATAAAAAA          GCCAGATCAT TGAT ATGATCTGGC           TTTTGCTTATTCTTT 100 32
         map NONE
HC661_RS03915  760298 ..  760322 - -15.7  -5.31877   ACGGAGCATAAAAAA          GCCGGGCACTG TAT CAGTGTCCGGC          AAGTTTGACGAGAAG 100 14
HC661_RS03910 NONE
HC661_RS03905  759726 ..  759749 - -14.6  -5.72616   ATGTATAGAAAAAAA          GCCGTGCTGC ACTG ACAGCACGGC           TGATTTACGTTATGC 100 35
HC661_RS03895  758414 ..  758424 -  -2.4  -5.04385   GATATGCTCAAAAAA                 GCCG CTT CGGT                 CATGGGGATTTCCGC  73 320
HC661_RS03835  744586 ..  744603 -  -7.7  -5.60993   GCGGCCATAAAAAAA             GAAGGAC CAGG GCCCTTC              TTTCCTTATATGCAT 100 43
HC661_RS03830  743434 ..  743462 -  -7.5  -6.09133   GATCCGAAAAAAAAA        GAAAAGGAGGG GACAAAG CCCTCCTTTTT        TCATCATCATGTTAA 100 37
HC661_RS03815  740008 ..  740033 - -13.3  -6.13503   CATTAAGAAAAAAAA         GGAACTTCCGC ACAG GCGGGAGTTCC          TTTTTGTGTTTACAG 100 35
HC661_RS03795  734982 ..  735008 - -10.9  -2.88634   AGCGTAATCAATAAG         GAGCTGCCC TTCATACGG GGGCAGCTC         TTTTTTTTGATGTTA  77 38
HC661_RS03775  729948 ..  729978 - -13.5  -5.10029   ATCAAGTGCAAAAAA       GGCTCTTCTTTCT CAAAC AGAAAAAAGAGCC       TCCCTTTTTATTTAT 100 33
HC661_RS03770  728612 ..  728632 - -12.6  -4.78848   GGTTGAAACATAAAA            TCCCTGCC TTTTC GGCAGGGA            TTGTTTTTATGAATG 100 32
HC661_RS03710  713594 ..  713615 -  -5.9  -4.80736   TATTAAATAAAGAAA           GTCCAGAACA TGG CGT-CTGGAC           TTTTGTCAGTCTTGT  75 31
HC661_RS03700  711698 ..  711725 -  -9.9  -3.53444   TTATTTCTTCTGAAA        CAGCCTGAACA AACAAA TGTGCAGGCTG         TTTTTTTATAACCCT  77 100
HC661_RS03670  708158 ..  708172 -  -3.6   -3.6707   ATCCAACATTTTAAA               TGAAAA TGA TTCTCA               AAGTCAATTAAGATG  52 50
        hmoA  707757 ..  707781 -  -9.4  -4.90477   GAGAAAAAATGAAAA         GAGCA-TTGCC CTGG GGCAAATGCTC          TTTATTATTTTTCGT  93 30
HC661_RS03620  702949 ..  702961 -  -3.3  -3.42257   GTGCAAACATAGGAA                TAGGG TTT CCCTG                AATCTATAAAGCCTC  48 29
HC661_RS03615 NONE
HC661_RS03610  700346 ..  700371 -  -5.4  -5.28176   CCTAGTTATAAAAAA         TAGCCCAGCA GAGAAG CGCTGAGCCA          TTATTGATTTATAGA  85 34
HC661_RS03590  697142 ..  697168 - -10.8  -3.76048   CTGGAATTAAGAGAA         GGCAACTAACCC TTA GGGATGGTTGCC         TTTTTTTAATCCGCA  83 195
HC661_RS03570  690376 ..  690398 -  -7.6  -5.77632   AAAACGATAAAAAAA           GCAGCCGCCT CTA AGGGCGCTGC           TGACACGGAGACCGG 100 60
        putP  685231 ..  685255 -  -8.6   -5.4505   GTGCGGAAGAAAAAA          GCCGTCAG GGATAAAAT CTGACGGC          TTTTTGTCTATTTCT  95 33
HC661_RS03545  684422 ..  684444 - -11.3  -5.24799   GTATAAATAGAAAAA          CGCC-GGCTG AATC CAGCCCGGCG           TTTTTTTATAGCGTA 100 31
HC661_RS03515  675169 ..  675193 - -13.6  -5.09895   CAGCTACGTAAAAAA         CCGCTCTGCCG ATGA CGGCAG-GCGG          TTTTTTTTATGCGTG 100 32
HC661_RS03495  671716 ..  671738 -   -15  -4.16785   ACAGGAGAAATTAAA           TAACAAGCCG AAA CGGCTTGTTA           TTTTTCTTGCTGATG 100 23
HC661_RS03395  651398 ..  651430 -  -9.3  -4.25606   GAATAGTCAAAAGAA      GCTTAGAATCCTT GGTTTAT AAGGGTTCTAAGC      TCTTTTTTCTTTTAT  85 168
        gabP  642495 ..  642519 -  -7.9  -5.40072   GGTTGGTTAAAAAAA         CACCCGCCCT TTTTTG AGGG-GGGTG          TTTGCGGTTATTGCG  93 33
HC661_RS03355  640410 ..  640433 - -11.8  -3.83756   AAATGATAACGCAAA          GGCCTCTCATG AGA CATG-GAGGCC          TTCTCTATGTTGAGA  91 57
HC661_RS03350  640184 ..  640203 -  -7.8  -5.89827   AATCATGAAAAAAAA            CACTCAGC GCCC GCTGGGTG             TTTTTTAATGAACAA 100 30
HC661_RS03335  637242 ..  637256 - -11.4  -5.59357   ATGAGATGAAAAAAA               GAGCCG GAA CGGCTC               TTTTTCGGATGTGTT 100 59
HC661_RS03330  636609 ..  636623 -    -5  -3.14132   TCTCTTTTCCATTAA               GAAAGA TCC TCCTTC               GTCAGCTGAATGCGC  53 7
HC661_RS03325  635708 ..  635731 -  -6.8  -5.68438   GGACGAAAGAAAAAA          TCCATGATCT GCGG ATATCATGGA           TTTTTTTCTTTCTTT 100 39
HC661_RS03320  633515 ..  633533 -  -7.4  -4.85129   ACGATATACGAAAAA             GAGGCC TTTTGGG GGCCTC             TTTTTTTGTCATGAT  85 34
HC661_RS03275  622916 ..  622946 -  -9.1  -5.15634   CATTCTAGCAAAAAA       GACCTTTTCAGTT GAGTA AACTGATAAGGCC       TTATTTATAAATAAG  90 82
HC661_RS03270  621615 ..  621638 - -15.4  -5.02074   TTATTGGCTAAAAAA          GAAAGGCCCT GTTA AGGGCCTTTC           TTTAAGCTGCTGTTG 100 27
HC661_RS03255 NONE
HC661_RS03250  618262 ..  618287 - -14.9  -5.67967   ATCAGCATAAAAAAA         GCCATTTCTCA ATGA TGAGAAATGGC          TTTTCTTTTATTATT 100 36
HC661_RS03225  614049 ..  614067 -   -11  -5.24129   GCTGTGGATAAAAAA             GCACCCCT TAA AGAGGTGC             TTGACTTTTTCTATT 100 36
HC661_RS03150  600940 ..  600960 -  -9.7  -5.52384   TCGGCATCAAAAAAA            GGACGGAAA GCG TGTCCGTCC            TTTTGTGTTAAGCCT 100 33
HC661_RS03145  599973 ..  600001 - -16.9  -4.89852   TCATATTCAGAAAAA        CAAAAAACGCCCG AAA CAGGCGTTTTTTG        TTACAAGTTCATATC 100 26
HC661_RS03140  598166 ..  598197 - -13.9   -5.0916   CTCTTAACATAAAAA      TACCGGAAAGAAG ACCATA CTTCTTTCCGGCA       TTCGTCATTTATCAC 100 30
HC661_RS03135  597487 ..  597506 -  -4.3  -4.57073   TACGGCGGTCAAAAA            TGATCGG TCTCCG CCAATCA             TTTCTGCAAGCTTCT  69 23
HC661_RS03130  596735 ..  596759 -   -10  -5.70829   AACAGCATAAAAAAA          CAAAGGGCCC GTTTA GGGTCCTTTG          TTTTTTATTTAAAAA 100 368
HC661_RS03105  592461 ..  592502 -  -7.4  -5.45802   GCCGCAAAATAAAAA GACCGC-CAAA-GCCGAAGG AACT CCTTTGGCTTTTTTGCGGTC TCACATTTATGCGGA  93 32
HC661_RS03095  591487 ..  591509 - -15.6  -5.11836   ACATGCAAAACAAAA           CCGCCGTCCT GAG AAGACGGCGG           TAATAGAAAAGTCAA 100 37
HC661_RS03080  589171 ..  589200 - -11.6  -4.74453   TAATACATGGAAAAA       GCCTGTTTCCTCT GCCAA AG-GGAAACAGGC       TTTTTATAATGGCTT  95 41
HC661_RS03065  585859 ..  585884 -  -6.8  -5.58454   CTGAGACGAAAAAAA         CCGCTGTGCAG TTTTT CTGCCC-GCGG         TTTTTTCGTATTATC 100 36
HC661_RS03045  583118 ..  583131 -  -2.3  -5.02502   CAGAGCAGATAAAAA               CAGCA TGCC CGCCG                TCAAGTAATGCAGCA  69 481
        fabF  580428 ..  580447 - -10.8  -5.42514   GGAGAAAGCAAAAAA            GGAGTGAA ATGA TTCACTCC             TTTTTTTGATGCCCG 100 41
HC661_RS03015  576782 ..  576804 - -11.3  -5.85737   AGACGAATAAAAAAA           GCCTGCAGC TATAC ACTGCAGGC           GGTTATTTTTCATTT 100 28
HC661_RS03010  575923 ..  575945 -  -8.5  -5.88471   GAGGACCAAAAAAAA           TCCTCCCAA TTGAT TTGGAAGGA           TTAGCCGTACCTGTG 100 243
       abc-f  574227 ..  574243 - -12.3  -5.07652   CTTTCCAAAACAAAA              CCCGTGA CAA TCACGGG              TTTTTACATTCATTT 100 35
HC661_RS03000  573380 ..  573398 -  -8.9  -5.17786   GAATAAAATGAAAAA             GCAGATC GTTAT GATCTGC             TTTTTTTATGTGCTG  90 31
HC661_RS02980 NONE
HC661_RS02975 NONE
HC661_RS02970 NONE
HC661_RS02965 NONE
HC661_RS02960  566470 ..  566507 -  -6.3  -5.66684   GAAGGCATAAAAAAA   CTGAGAGCCGCCT GGGCGCTGTAAA AGGCAGCTCACAG    TTTGAAATACTGAAG  95 77
HC661_RS02950  564076 ..  564112 - -16.8  -3.65812   GTGGGCGGAATATAA    TGAAAAGGCCGAACAA GTTCA TTGTTCGGCCTTTTCT    GATTGATTTGCGAAC 100 7
HC661_RS02940  561947 ..  561969 -  -4.8  -5.62219   AATACATCAAAAAAA           GCTGTCAG CTTGGTT CTGACGGC           TTATTTTTGGTGAAT  90 44
HC661_RS02935  561397 ..  561418 -  -8.1  -4.64598   CAAGCATGTTAAAAA           CATACCGGCA GCA TGC-GGTATG           TTTTTTCAGGTTATG  82 36
HC661_RS02925  559237 ..  559250 -  -9.5  -5.40004   TACGAAATGAAAAAA               GCGCC GTTC GGCGC                CTTTTTTCTTTCATG 100 36
HC661_RS02910  556070 ..  556091 -  -8.1  -5.53288   TTGAACTGAAAAAAA           CATACCAAC AAAT ATTGGTATG            TTTTTTATGTCGATT 100 39
HC661_RS02855  546456 ..  546482 -  -6.7  -2.74597   CGGATAGACAGAGGA         GAGCAGTAA CTTACGTGT TTACTGCTC         TTTTTTGTGTTGAAT  56 89
        cotR  538978 ..  539003 -  -9.1  -3.72324   CAGCCGCATTAATAA         TACCAAGGG TTTTGAGT CCCTTGGTA          TTTTTTGTTCATTGT  76 59
HC661_RS02805 NONE
HC661_RS02800  537371 ..  537387 -  -2.2  -5.03747   AAAGGCTCCAAAAAA              GCAGCT CTTTT AGCCAC              CGTTCCTACGGTTCA  69 445
HC661_RS02790  535943 ..  535958 -  -3.4  -4.15044   TGTTCGTTGAAGAAA              TTTTTA ATAA TAAAAA               CAGATTAGATTGTAG  59 170
HC661_RS02775  533261 ..  533271 -    -4  -2.87598   AGTCTGATAAAAGAT                 TTTC TGT GAAA                 TCATTTAACAATTAT  46 30
HC661_RS02770  532965 ..  532978 -  -3.1  -2.99471   TTATTTTTATATACA               GAACA TATT CGTTC                AAACTAAGATTTGCG  45 95
HC661_RS02765  532184 ..  532201 -  -2.7   -4.0616   TACCCTAATGATAAA             CTGAACA CTAT TGTTAAG              GTTATTGATAAAAAA  56 410
HC661_RS02725  525113 ..  525123 -    -4  -3.13773   TGTTAGATCTAAAAT                 GAAT ATG ATTC                 GCCATCTTCAGGCAC  48 8
HC661_RS02720  524602 ..  524626 -  -8.6  -5.71983   TTAATTATAAAAAAA          GAGACCAAGC TATTC ACCTGGTCTC          TCACTATTTCAACTT 100 48
        cmpA  521974 ..  521993 -  -6.4  -5.09259   TATGGTAAAATAAAA            GCACTGCT TACG AGCAGTGT             TTTTTTCTGTAGAAA  83 13
HC661_RS02595  510499 ..  510519 -    -9  -4.81551   TATTCATATGAAAAA           GCGGACGGT TAAT ACCG-CCGC            TTTTTTTGCTGCACG  89 13
HC661_RS02565  503566 ..  503593 -  -9.3  -4.71776   GAATATGCAATAAAA        CATGAACATGA TGTGAC TCATGTCCATG         TTCATGTAGAGCCTG 100 69
        fbpA NONE
        fbpB  502201 ..  502217 -    -8  -6.13503   GAGCAATAAAAAAAA              GAGCCT GAAAA AGGCTC              TTTTTATGTATGGCT 100 29
HC661_RS02505 NONE
HC661_RS02500  491777 ..  491799 -   -15  -4.01939   GAAGGCATAATGAAA           GCCCAAAACA GTT TGTTTTGGGC           TTGTGTCTTTACTCG 100 34
HC661_RS02475 NONE
HC661_RS02470  488407 ..  488428 -  -4.3  -5.01535   TTATAATCAGAAAAA           CCTCGTTCT CTTG AGAGCGGGG            TTTTTCCTTTATTCC  76 327
HC661_RS02455  486088 ..  486104 - -10.8  -5.45802   GCGTCAAAAGAAAAA              CCGGCC GCAAT GGCCGG              TTTTTTCTAACGGAA 100 32
HC661_RS02450  485720 ..  485742 - -10.7   -5.1963   GTTAATGAATAAAAA           TAAACAGGC GGCAT GCCTGTTTA           TTTTCGTTTGCGTGA 100 23
HC661_RS02445  484861 ..  484887 - -10.3  -4.86621   ATCTCCAATGAAAAA         GTGCTATTAGA GTGAA TCTAACAGCAC         TTTGCATTACTTCAT  93 74
HC661_RS02440  483943 ..  483956 -  -2.4  -3.06696   TTTCGTTTGAATATA               TGAC GGAAAA GTCA                GGATGTTATATAAAA  42 352
HC661_RS02435  483531 ..  483553 - -13.6  -5.00616   GGCGCTTTTAAAAAA           TAAACAGGCA GCA TGCCTGTTTA           TTTTTTTGTTTGTTG 100 147
HC661_RS02380  468571 ..  468591 - -11.2  -5.18357   TAACGCATGAAAAAA            GCTCCTCT GCAGA AGAGGAGC            TTTTTTATTGATAAT 100 30
HC661_RS02330  456578 ..  456606 -  -8.8  -2.57132   TCGCCGGCTCATAAC        CGCGCGCTCC TTTTCATCG GGAGCGCGCT        TTTCGTGCTCCTTAA  64 377
HC661_RS02280  449255 ..  449272 -  -9.8  -5.44119   GCCATCGTAAAAAAA             GCCGCC TCCAGC GGCGGC              TTTCGGACAAGCCTG 100 41
HC661_RS02250 NONE
HC661_RS02245 NONE
HC661_RS02240  442176 ..  442205 -  -9.4  -6.41881   GATAAGAAAAAAAAA      GCGATCGCAGGCTC TTTA GAGCC-G-GATCGC       TTTTTGCTTACGCGC 100 33
HC661_RS02215  436001 ..  436017 -  -5.7  -2.94232   CCGCTGGTAAATAAG              TCCCCGA ATT CCGGGGG              TTTTTTTATGCGCCG  53 31
HC661_RS02205 NONE
        nfsA  434458 ..  434479 - -15.9  -5.59879   GAGAAATAGAAAAAA           CCTGCCGGA GTGT TCCGGCAGG            CTGATACGTTTATTT 100 35
HC661_RS02195 NONE
HC661_RS02190  431975 ..  432002 - -14.2  -5.68023   CGAGAAGTAAAAAAA        GAACCCGGTCAC ATAC GTGATCGGGTTC         TTTTTGGTTTACCGC 100 34
HC661_RS02165  426491 ..  426535 -  -5.1  -2.63479   AATATCCTGACATGA GCTTCACCTCCATATTGTCTA TAC CATACAATATGTAAAAGAAGC TGCTTTGTAAGGGAT  49 73
HC661_RS02160  426341 ..  426374 - -13.9  -5.07652   CGGCGGAAAACAAAA     GAAAACGCCGCAGGT CAAA ACCCGCAGCGTCCTC      ATATAGACGGAGTGA 100 44
HC661_RS02135 NONE
HC661_RS02130  420295 ..  420319 -  -8.5  -5.42975   TGATATAAATAAAAA          GAGCGGGGG GATGCAG CCCTCGCTC          TTTTTACGTTCACTT  95 97
HC661_RS02075  408675 ..  408691 -    -3  -3.86897   CGTATCTGTGACAAA             TGAC-GC CAGG GCTGTCA              TCAAGGGAAATCTCT  54 492
HC661_RS02065  405528 ..  405549 - -15.9  -5.17353   AGACGCATCAAAAAA           GCCTGCGGA CGAT TCCGCAGGC            TTTTCTTTATCTGTT 100 39
HC661_RS02040 NONE
HC661_RS02035 NONE
HC661_RS02030 NONE
        tcyC  399395 ..  399424 - -13.8  -5.77853   AACCGCCAAAAAAAA       GAAGAAGCGAAA TCAGTG TTTCGCTTCTTC        TCCCGCTCCTACAAA 100 34
HC661_RS02020  398682 ..  398700 -  -9.6  -6.09196   CCGAAAATAAAAAAA             CAAAACCG TTG CGGCTTTG             TTTTTAATGAACGGA 100 29
HC661_RS02015  397868 ..  397888 -    -4  -3.88442   GAAAATATCATCAAA            CTCAACGT GTCCA ACGTCAAG            ACAGGGGATATCACG  57 68
HC661_RS02005 NONE
HC661_RS02000  394982 ..  394998 -  -9.4    -5.252   CAGGCTGACAAAAAA              GGAGGG GGACA CCCTCC              TTTTTGTCTTTTATT 100 36
        hxlA NONE
        hxlB  364979 ..  365004 - -13.3   -4.9934   ACAAGACGATAAAAA         GACGGCCATCT GATA AGAAGGCCGTC          AGCAAATCATTCCAG 100 32
HC661_RS01955 NONE
HC661_RS01950  363761 ..  363790 - -10.8  -2.55034   AAAGTTTATAAAAGT       TCCCTGAGAGAA ATAAGA TTCTCTCAGGGC        TTTCTTTTACATTGA  76 32
HC661_RS01915 NONE
HC661_RS01910  352927 ..  352937 -  -2.6  -4.95854   TAAAAAATCTAAAAA                 TTTT ATG AAAA                 ATTATATAGGGCTGA  68 27
        nasD  350409 ..  350419 -  -6.8  -3.14564   TTACTGTTTTATGAA                 GTCG TGA CGAC                 ATTTTCGAATAGATC  60 8
        nirD  350030 ..  350051 -  -9.5  -3.93769   AGTTTAAAAAATGAA           GGACCACTT GAAA AAGTGATCC            GGTCTTTGCTCAATA  83 35
        cobA  348506 ..  348538 -  -4.8  -2.95245   ACACAATAAAAAAGG      GCTGACCCCCGA TGTTGAGTC TGGGGGGTCAGA      AAAGCATTCCGGCGT  51 42
HC661_RS01845  336731 ..  336750 -  -8.6  -5.74122   TATGATACAAAAAAA            GACCCTTC GATC GAAGAGTC             AGCGGGAAAAAACAG 100 24
HC661_RS01840  336031 ..  336044 -  -2.3  -4.17355   TAATTTGAAAAAACA               TCCCT TCAG AGGGG                CTTTTTATTTATTGA  56 82
HC661_RS01835  335598 ..  335617 - -12.2  -6.19302   ATAGAATAAAAAAAA            CCTCCCTT TTGA AAGGGAGG             TTTTTTGTTTATTTC 100 45
HC661_RS01820  332375 ..  332400 -  -3.9  -3.84246   TTTCGAAGGATTAAA         TGATTCAACCG CGTT CGGACGAAACA          TGAGCCGGCTGATCA  57 209
HC661_RS01800  328923 ..  328950 -   -15  -5.69793   AGAGTAAACAAAAAA        GCAGTACATGAC AAAC GCCATGTACTGC         TTTTTTCAATTCGCT 100 31
HC661_RS01775  322187 ..  322206 - -10.7  -4.85618   AAATAACGAAGAAAA            GCAGCCC TGTAAC GGGCTGC             TTTTTTTATGCTTCA  93 31
HC661_RS01720  310752 ..  310801 - -10.6  -5.43514   AAAAGAACGAAAAAA CCGCCGTTAAGCGGTGCAGCAG TCTCAT CTGCTGCTCCGTTTGACGGCTT TTTTTTACAGAAATA 100 30
HC661_RS01695 NONE
HC661_RS01690 NONE
HC661_RS01685  304589 ..  304619 - -15.7  -4.52143   GTTAAATATAATAAA       GAGAAGAACTTAG GACAG CTAAGTTCTTCTC       GATTACTCTACTCAA 100 33
HC661_RS01680  303171 ..  303191 -  -6.1  -5.44119   CCCAGCTGAAAAAAA            TTCCGATGA ACG CCTTCGGAA            AACCGGAAGAAGTCG  90 148
HC661_RS01665  300339 ..  300353 -  -4.2  -3.66908   GTTTTTTAAAATGAA               CCCGCT GAA AACGGA               CGGAAGGGGCAGGTT  55 356
HC661_RS01650  296574 ..  296595 - -11.7  -6.09196   GTGAAAATAAAAAAA           GGAAATAGC CTGC GCTATTTCC            TTTCTTGTTGTCAGG 100 36
HC661_RS01625 NONE
      lmr(B)  290088 ..  290112 - -12.2  -5.71712   CGGTATATAAAAAAA          CAGCAGACTC ACGGG GAGCCTGCTG          TTTTCTTATGAGTGA 100 31
         pcp  288004 ..  288014 -  -2.4  -3.53224   GATTTTTGTTTGAAA                 TGCC TCT GGCC                 GTCATGTTTCTGACA  47 247
HC661_RS01585  284225 ..  284240 - -10.4  -5.38054   CTTTACAAATAAAAA              GCCCCT TTAA AGGGGC               TTTTATCCGGCCTTT 100 47
HC661_RS01560  280216 ..  280248 - -11.5  -5.86976   GCACAAAACAAAAAA      GCTTGCAGAAAAAAC ATC ATTTTCTCTACAAGC      TGCTTTTTCATTCTT 100 33
HC661_RS01530 NONE
HC661_RS01525  273906 ..  273931 - -11.2  -5.25803   AACCGGCAGAAAAAA         GGTGTTCAGG ACGCTG CCCGAACACC          TTTTGTTTAGGAAAT 100 32
        mmuM  272801 ..  272825 - -12.2   -5.4505   CGTTCTAATAAAAAA          TCTCATGCCG GCGAA CGGCACGAGA          TTCCGGCGAACCGGC 100 75
HC661_RS01505  268600 ..  268618 - -10.3  -4.70583   TTGATTAATAGAAAA             GACCACC AATAA GGTGGTC             TTTTTTGTGTTTACA  93 36
HC661_RS01455  258748 ..  258778 - -15.6  -4.06419   CTCCTTTAGAAATAA       CTCCAAGAATACTC ATT GAGCATTCCTGGAG       CAAGGAGCTGCCTGT 100 45
HC661_RS01450  258281 ..  258297 -  -5.1  -5.67063   TGCATCATAAAAAAA              CCCCT TAAGCAG AGGGG              TTTTAACTGATCATG  90 28
        hpaB  256647 ..  256669 -  -8.5  -5.80951   AGCCAAAATAAAAAA          TAGGATCGGC GGCA GCCGATCC-A           GCTATCATAAGCAGA 100 61
        glpT NONE
HC661_RS01430  253721 ..  253746 - -10.5  -5.75945   ATCGGGCAAAAAAAA         TGGGTTCGG CATCATCT CCGAACCCA          TGCTGGCTTTATGAT 100 34
HC661_RS01405  248763 ..  248791 -  -7.5  -5.24129   CGTCTGCATAAAAAA       GCTGC-C-GCCGT TTGAT ACGGCCGGGCAGC       CCGGGAACAGATTAT  90 37
HC661_RS01340 NONE
HC661_RS01335  237320 ..  237339 - -11.4  -5.21709   CCGCACATGAAAAAA            GCTGACGG AGAA CCGCCAGC             TTTAAATTTGAAACA 100 27
HC661_RS01315 NONE
HC661_RS01310  231688 ..  231712 -   -15   -3.8917   TTTTAATTAGAAGAA          CAGCCGCCCA TTGTG CGGGCGGCTG          TCTGCTTGGAGTTAA 100 94
HC661_RS01300  229462 ..  229483 -    -3  -5.08878   AACACATAAAGAAAA           GCTGAC GGCATCATTT GTCAGC            TTTTTTCTCATTTTA  70 38
HC661_RS01280  226525 ..  226536 -    -3  -4.35483   TTCCATCATAATAAA                TTTC CGTG GAAA                 ATACAATTGTTTTTT  60 283
HC661_RS01275  224951 ..  224973 -  -9.9   -4.6902   GGACAAGCCGAAAAA           GACACCCCT GTAAG AGAGGTGTC           TTTTTGAATTATACA  93 34
HC661_RS01270  224066 ..  224099 - -11.8  -5.76633   GCACAGACAAAAAAA     CCTTCAGCTCCCCC GGTCGG GAGGAAGCTGAAGA      ATCGCATGAAAGATT 100 102
HC661_RS01260  221969 ..  221991 -  -3.3  -3.28712   TGCCGCTTTCGACAA           GCTGTTTCC CTTCT GGTAACTGC           CTATGTCTTTACACG  48 420
HC661_RS01225 NONE
HC661_RS01220  215751 ..  215770 - -11.4  -5.21709   CCGCACATGAAAAAA            GCTGACGG AGAA CCGCCAGC             TTTAAATTTGAAACA 100 27
HC661_RS01215  214776 ..  214797 -  -4.4   -5.4588   TAAAATGAGAAAAAA           GCTGACAA ATGATG CCGTCAGC            TTTTCTTTATGTGTT  86 44
HC661_RS01205  212547 ..  212571 - -14.3  -2.92246   TTAACTCCAAGCAGA          CAGCCGCCC GCACAAT GGGCGGCTG          TTCTTCTAATTAAAA  95 35
HC661_RS01120 NONE
HC661_RS01115 NONE
        murQ  196080 ..  196113 - -10.1   -4.0896   AAACGCGTCCTAAAA     GCGCCTGCGCCGATC ATGA AAACGGCGCGGGCTC      GTAAAAGCACATTAT  86 58
HC661_RS01105 NONE
       pbp4b  193337 ..  193349 -  -3.4  -4.38154   ATAGTTTGGACAAAA                GACA TGGGT TGTC                ATTCAATGGCTTCAT  62 24
HC661_RS01095 NONE
HC661_RS01090  190103 ..  190118 -  -6.2  -4.12942   TGAAATGCGTCAAAA              TGTTAC ACGT GTAACA               CGAATGTTGTCAGTA  69 35
HC661_RS01085  188376 ..  188403 -  -3.6   -3.2818   TGAACAGGGATAAGA        CCATGGATAAT TTCCGGC ATTA-CCATGG        ACGATCTTCGGAAAA  48 17
HC661_RS01080 NONE
HC661_RS01075 NONE
HC661_RS01070 NONE
HC661_RS01065  184559 ..  184578 -  -9.3  -5.58074   GAAGTATGAAAAAAA            CCGCTCA GCTACG TGAGCGG             TTTTTTCCGTACAGC 100 10
        pdaB  160763 ..  160784 -  -4.3  -2.78463   ATGGTCGTTATTACA           GCGCTTGAA TGGG TTCCTGCGC            TACGAGTGAATAATG  45 127
HC661_RS00935  159596 ..  159618 -  -6.1  -5.46657   CAGCTGAATAAAAAA           GGGGCCGGG ATCAA CACGGCCCG           GCCTTTTATTGGCTT  91 31
HC661_RS00915  156628 ..  156649 -  -2.1  -5.30339   ATTAAAATATAAAAA           CGGCATCCC GTCA GAGGTGCTG            TTTTTTTGCGGCTTT  73 14
        abrB   45965 ..   45990 -   -12   -6.2845   AATCATAAAAAAAAA         CCGTTCTTGT ATCGTA ACAAGAACGG          TTTTTGTATGAAATA 100 43
HC661_RS00120 NONE
HC661_RS00115   25112 ..   25135 -  -4.6  -5.16237   AAGCCCATGAAAAAA          GACGCTTC CAATTAAC GAAACGTC           TCTTTCACAATATGA  76 13
HC661_RS00110 NONE
HC661_RS00105   23716 ..   23743 -  -8.5  -5.50499   TTATATGCAAAAAAA        GCGATTTTCTC TGTTCG GGGAAAATCGC         TTTGTTATTTTTATT  95 36
HC661_RS00095   22162 ..   22182 - -10.3  -5.05228   ATCAAACCATAAAAA            GGTGCGCCC TAG AGGCGCGCC            TTTTTTGCTGCCCGG  93 13
HC661_RS00065   14817 ..   14837 - -15.5  -3.63068   CTATATTATGGTAAA            GGCAGCTCA TCA TGAGCTGCC            TTTTTTGTTTATAAG 100 34
