CHH28_RS00480 e4e65ed36d40881df3bbbec3273f91a5 444 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 134 1.1E-43 T 29-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS00480 e4e65ed36d40881df3bbbec3273f91a5 444 Gene3D G3DSA:3.40.120.10 2 153 1.4E-49 T 29-03-2018 CHH28_RS00480 e4e65ed36d40881df3bbbec3273f91a5 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 1.4E-13 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS00480 e4e65ed36d40881df3bbbec3273f91a5 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 172 191 1.4E-13 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS00480 e4e65ed36d40881df3bbbec3273f91a5 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 247 1.4E-13 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS00480 e4e65ed36d40881df3bbbec3273f91a5 444 Gene3D G3DSA:3.40.120.10 268 371 5.4E-30 T 29-03-2018 CHH28_RS00480 e4e65ed36d40881df3bbbec3273f91a5 444 SUPERFAMILY SSF53738 155 254 3.1E-28 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS00480 e4e65ed36d40881df3bbbec3273f91a5 444 SUPERFAMILY SSF53738 256 363 1.73E-29 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS00480 e4e65ed36d40881df3bbbec3273f91a5 444 SUPERFAMILY SSF55957 356 444 2.22E-23 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS00480 e4e65ed36d40881df3bbbec3273f91a5 444 Gene3D G3DSA:3.30.310.50 372 444 1.3E-20 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS00480 e4e65ed36d40881df3bbbec3273f91a5 444 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 442 47.106 T 29-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS00480 e4e65ed36d40881df3bbbec3273f91a5 444 SUPERFAMILY SSF53738 2 179 9.03E-48 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS00480 e4e65ed36d40881df3bbbec3273f91a5 444 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 256 362 1.1E-29 T 29-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS00480 e4e65ed36d40881df3bbbec3273f91a5 444 Gene3D G3DSA:3.40.120.10 155 267 5.1E-34 T 29-03-2018 CHH28_RS00480 e4e65ed36d40881df3bbbec3273f91a5 444 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 440 3.5E-191 T 29-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS00480 e4e65ed36d40881df3bbbec3273f91a5 444 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 371 439 8.8E-15 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS00480 e4e65ed36d40881df3bbbec3273f91a5 444 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 252 1.9E-18 T 29-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS00480 e4e65ed36d40881df3bbbec3273f91a5 444 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 29-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS02910 06cde6500ab992c6ca888cb2a295ddd8 239 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS02910 06cde6500ab992c6ca888cb2a295ddd8 239 SMART SM00382 31 219 2.1E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS02910 06cde6500ab992c6ca888cb2a295ddd8 239 SUPERFAMILY SSF52540 2 230 1.13E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS02910 06cde6500ab992c6ca888cb2a295ddd8 239 Gene3D G3DSA:3.40.50.300 1 235 7.6E-63 T 29-03-2018 CHH28_RS02910 06cde6500ab992c6ca888cb2a295ddd8 239 Pfam PF00005 ABC transporter 22 171 2.1E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS19545 3aa50235660d3d00629a92e12df1c1fd 214 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 13 213 4.0E-48 T 29-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CHH28_RS19545 3aa50235660d3d00629a92e12df1c1fd 214 Pfam PF01467 Cytidylyltransferase-like 13 187 8.9E-27 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CHH28_RS19545 3aa50235660d3d00629a92e12df1c1fd 214 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 9 214 26.643 T 29-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CHH28_RS19545 3aa50235660d3d00629a92e12df1c1fd 214 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 12 68 3.6E-10 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CHH28_RS19545 3aa50235660d3d00629a92e12df1c1fd 214 SUPERFAMILY SSF52374 11 214 4.83E-51 T 29-03-2018 CHH28_RS19545 3aa50235660d3d00629a92e12df1c1fd 214 Gene3D G3DSA:3.40.50.620 4 214 1.3E-51 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS13100 a4518cb4e5e971d10153d9a58d2d033b 413 SUPERFAMILY SSF56954 5 398 1.12E-32 T 29-03-2018 CHH28_RS13100 a4518cb4e5e971d10153d9a58d2d033b 413 Pfam PF02321 Outer membrane efflux protein 227 388 6.3E-9 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CHH28_RS13100 a4518cb4e5e971d10153d9a58d2d033b 413 Pfam PF02321 Outer membrane efflux protein 33 199 5.5E-6 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CHH28_RS13100 a4518cb4e5e971d10153d9a58d2d033b 413 Gene3D G3DSA:1.20.1600.10 19 397 7.2E-25 T 29-03-2018 CHH28_RS01665 658405a5fef87fc329f80a1058ff4b55 359 SUPERFAMILY SSF56796 4 354 4.32E-116 T 29-03-2018 CHH28_RS01665 658405a5fef87fc329f80a1058ff4b55 359 Pfam PF01761 3-dehydroquinate synthase 65 323 7.9E-109 T 29-03-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CHH28_RS01665 658405a5fef87fc329f80a1058ff4b55 359 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 353 1.1E-117 T 29-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CHH28_RS01665 658405a5fef87fc329f80a1058ff4b55 359 Gene3D G3DSA:3.40.50.1970 3 170 3.4E-49 T 29-03-2018 CHH28_RS01665 658405a5fef87fc329f80a1058ff4b55 359 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 356 42.627 T 29-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CHH28_RS01665 658405a5fef87fc329f80a1058ff4b55 359 Gene3D G3DSA:1.20.1090.10 171 359 3.0E-68 T 29-03-2018 CHH28_RS01665 658405a5fef87fc329f80a1058ff4b55 359 PIRSF PIRSF001455 3 357 4.8E-109 T 29-03-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CHH28_RS15680 ac53d0fee2bc21e8c5ce71bdb01bd606 395 Gene3D G3DSA:1.10.3210.10 182 373 1.8E-21 T 29-03-2018 CHH28_RS15680 ac53d0fee2bc21e8c5ce71bdb01bd606 395 SMART SM00052 1 180 0.0013 T 29-03-2018 IPR001633 EAL domain CHH28_RS15680 ac53d0fee2bc21e8c5ce71bdb01bd606 395 Pfam PF00563 EAL domain 51 175 3.0E-13 T 29-03-2018 IPR001633 EAL domain CHH28_RS15680 ac53d0fee2bc21e8c5ce71bdb01bd606 395 SUPERFAMILY SSF141868 2 179 8.89E-24 T 29-03-2018 IPR001633 EAL domain CHH28_RS15680 ac53d0fee2bc21e8c5ce71bdb01bd606 395 SUPERFAMILY SSF109604 166 378 2.1E-37 T 29-03-2018 CHH28_RS15680 ac53d0fee2bc21e8c5ce71bdb01bd606 395 Gene3D G3DSA:3.20.20.450 22 181 8.9E-19 T 29-03-2018 IPR001633 EAL domain CHH28_RS15680 ac53d0fee2bc21e8c5ce71bdb01bd606 395 Pfam PF08668 HDOD domain 189 302 3.8E-18 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD CHH28_RS15680 ac53d0fee2bc21e8c5ce71bdb01bd606 395 PIRSF PIRSF003180 1 386 3.1E-92 T 29-03-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing CHH28_RS07685 03f07fa0b8ec39bd847d0f8e07d4e305 455 SUPERFAMILY SSF161070 9 453 1.24E-110 T 29-03-2018 CHH28_RS07685 03f07fa0b8ec39bd847d0f8e07d4e305 455 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 15 36 1.8E-18 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CHH28_RS07685 03f07fa0b8ec39bd847d0f8e07d4e305 455 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 44 63 1.8E-18 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CHH28_RS07685 03f07fa0b8ec39bd847d0f8e07d4e305 455 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 258 278 1.8E-18 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CHH28_RS07685 03f07fa0b8ec39bd847d0f8e07d4e305 455 Pfam PF00209 Sodium:neurotransmitter symporter family 9 127 1.3E-25 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CHH28_RS07685 03f07fa0b8ec39bd847d0f8e07d4e305 455 Pfam PF00209 Sodium:neurotransmitter symporter family 151 449 2.8E-19 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CHH28_RS05950 557ccbffad964ec681919b7f72f0d524 123 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 71 121 8.0E-18 T 29-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CHH28_RS05950 557ccbffad964ec681919b7f72f0d524 123 Gene3D G3DSA:1.20.5.1030 67 118 2.4E-17 T 29-03-2018 CHH28_RS05950 557ccbffad964ec681919b7f72f0d524 123 Hamap MF_00422 Protein translocase subunit SecE [secE]. 62 120 12.466 T 29-03-2018 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CHH28_RS05950 557ccbffad964ec681919b7f72f0d524 123 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 70 122 1.8E-17 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CHH28_RS05950 557ccbffad964ec681919b7f72f0d524 123 PRINTS PR01650 Bacterial translocase SecE signature 64 84 2.6E-25 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CHH28_RS05950 557ccbffad964ec681919b7f72f0d524 123 PRINTS PR01650 Bacterial translocase SecE signature 108 123 2.6E-25 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CHH28_RS05950 557ccbffad964ec681919b7f72f0d524 123 PRINTS PR01650 Bacterial translocase SecE signature 43 64 2.6E-25 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CHH28_RS05950 557ccbffad964ec681919b7f72f0d524 123 PRINTS PR01650 Bacterial translocase SecE signature 88 108 2.6E-25 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CHH28_RS17115 6a50cd15943de1d767c5e14dc894e1f8 469 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 348 467 1.0E-25 T 29-03-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain CHH28_RS17115 6a50cd15943de1d767c5e14dc894e1f8 469 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 33 466 9.1E-167 T 29-03-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 CHH28_RS17115 6a50cd15943de1d767c5e14dc894e1f8 469 SUPERFAMILY SSF54862 98 119 1.6E-31 T 29-03-2018 CHH28_RS17115 6a50cd15943de1d767c5e14dc894e1f8 469 SUPERFAMILY SSF54862 165 356 1.6E-31 T 29-03-2018 CHH28_RS17115 6a50cd15943de1d767c5e14dc894e1f8 469 Gene3D G3DSA:1.10.1060.10 288 334 0.011 T 29-03-2018 CHH28_RS17115 6a50cd15943de1d767c5e14dc894e1f8 469 Gene3D G3DSA:1.10.1060.10 214 287 8.1E-12 T 29-03-2018 CHH28_RS17115 6a50cd15943de1d767c5e14dc894e1f8 469 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 266 277 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CHH28_RS17115 6a50cd15943de1d767c5e14dc894e1f8 469 Pfam PF12801 4Fe-4S binding domain 89 123 3.1E-5 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CHH28_RS17115 6a50cd15943de1d767c5e14dc894e1f8 469 Gene3D G3DSA:2.60.40.10 348 468 2.2E-24 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS17115 6a50cd15943de1d767c5e14dc894e1f8 469 Pfam PF13746 4Fe-4S dicluster domain 211 318 8.8E-48 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CHH28_RS00620 0ca371900f1d7af72960d708b9a89870 438 Gene3D G3DSA:3.40.710.10 27 425 1.2E-83 T 29-03-2018 CHH28_RS00620 0ca371900f1d7af72960d708b9a89870 438 Pfam PF00144 Beta-lactamase 55 404 6.7E-66 T 29-03-2018 IPR001466 Beta-lactamase-related CHH28_RS00620 0ca371900f1d7af72960d708b9a89870 438 SUPERFAMILY SSF56601 50 414 5.09E-83 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS09460 d256b5b8287d036ce844b777b52e96e0 627 SMART SM01340 213 331 1.2E-58 T 29-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CHH28_RS09460 d256b5b8287d036ce844b777b52e96e0 627 Gene3D G3DSA:3.30.565.10 2 207 7.9E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS09460 d256b5b8287d036ce844b777b52e96e0 627 SMART SM00853 440 583 1.0E-53 T 29-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CHH28_RS09460 d256b5b8287d036ce844b777b52e96e0 627 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 29-03-2018 IPR014762 DNA mismatch repair, conserved site CHH28_RS09460 d256b5b8287d036ce844b777b52e96e0 627 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 127 1.5E-12 T 29-03-2018 CHH28_RS09460 d256b5b8287d036ce844b777b52e96e0 627 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 623 29.134 T 29-03-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 CHH28_RS09460 d256b5b8287d036ce844b777b52e96e0 627 SUPERFAMILY SSF118116 436 625 2.22E-63 T 29-03-2018 CHH28_RS09460 d256b5b8287d036ce844b777b52e96e0 627 SUPERFAMILY SSF55874 2 211 3.41E-52 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS09460 d256b5b8287d036ce844b777b52e96e0 627 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 330 8.2E-39 T 29-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CHH28_RS09460 d256b5b8287d036ce844b777b52e96e0 627 Gene3D G3DSA:3.30.230.10 208 330 1.3E-29 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CHH28_RS09460 d256b5b8287d036ce844b777b52e96e0 627 SUPERFAMILY SSF54211 192 331 8.72E-39 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS09460 d256b5b8287d036ce844b777b52e96e0 627 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 2 311 1.2E-97 T 29-03-2018 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 CHH28_RS09460 d256b5b8287d036ce844b777b52e96e0 627 Pfam PF08676 MutL C terminal dimerisation domain 436 583 1.1E-51 T 29-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CHH28_RS18695 fae366a2f465332c1b6d4a1a94fe077e 242 Pfam PF04545 Sigma-70, region 4 185 233 1.5E-18 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS18695 fae366a2f465332c1b6d4a1a94fe077e 242 Pfam PF04539 Sigma-70 region 3 101 155 1.6E-8 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS18695 fae366a2f465332c1b6d4a1a94fe077e 242 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 6 239 63.683 T 29-03-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CHH28_RS18695 fae366a2f465332c1b6d4a1a94fe077e 242 PIRSF PIRSF000770 7 242 1.1E-38 T 29-03-2018 CHH28_RS18695 fae366a2f465332c1b6d4a1a94fe077e 242 Pfam PF04542 Sigma-70 region 2 20 92 7.7E-17 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS18695 fae366a2f465332c1b6d4a1a94fe077e 242 Gene3D G3DSA:1.10.10.10 151 239 4.6E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS18695 fae366a2f465332c1b6d4a1a94fe077e 242 Gene3D G3DSA:1.10.10.10 94 142 2.1E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS18695 fae366a2f465332c1b6d4a1a94fe077e 242 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 47 60 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS18695 fae366a2f465332c1b6d4a1a94fe077e 242 PRINTS PR00046 Major sigma-70 factor signature 189 201 1.0E-11 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS18695 fae366a2f465332c1b6d4a1a94fe077e 242 PRINTS PR00046 Major sigma-70 factor signature 221 232 1.0E-11 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS18695 fae366a2f465332c1b6d4a1a94fe077e 242 PRINTS PR00046 Major sigma-70 factor signature 206 221 1.0E-11 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS18695 fae366a2f465332c1b6d4a1a94fe077e 242 PRINTS PR00046 Major sigma-70 factor signature 47 60 1.0E-11 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS18695 fae366a2f465332c1b6d4a1a94fe077e 242 SUPERFAMILY SSF88659 162 239 2.99E-21 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS18695 fae366a2f465332c1b6d4a1a94fe077e 242 Gene3D G3DSA:1.10.1740.10 9 90 2.7E-22 T 29-03-2018 CHH28_RS18695 fae366a2f465332c1b6d4a1a94fe077e 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 236 7.7E-80 T 29-03-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CHH28_RS18695 fae366a2f465332c1b6d4a1a94fe077e 242 SUPERFAMILY SSF88946 15 92 1.28E-24 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS18695 fae366a2f465332c1b6d4a1a94fe077e 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 235 1.5E-33 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS18695 fae366a2f465332c1b6d4a1a94fe077e 242 SUPERFAMILY SSF88659 94 161 1.22E-12 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS18410 bc809204fb250550f72e049e6882878b 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 356 3.2E-74 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CHH28_RS18410 bc809204fb250550f72e049e6882878b 370 Gene3D G3DSA:3.20.20.70 1 368 2.0E-106 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS18410 bc809204fb250550f72e049e6882878b 370 SUPERFAMILY SSF51395 1 356 2.52E-102 T 29-03-2018 CHH28_RS17820 446f691edc741f893c543d0801574e34 865 SUPERFAMILY SSF81923 4 156 4.61E-38 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CHH28_RS17820 446f691edc741f893c543d0801574e34 865 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 863 0.0 T 29-03-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 CHH28_RS17820 446f691edc741f893c543d0801574e34 865 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CHH28_RS17820 446f691edc741f893c543d0801574e34 865 SMART SM01086 773 862 2.4E-36 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CHH28_RS17820 446f691edc741f893c543d0801574e34 865 SUPERFAMILY SSF52540 160 548 1.44E-98 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS17820 446f691edc741f893c543d0801574e34 865 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 634 652 - T 29-03-2018 IPR028299 ClpA/B, conserved site 2 CHH28_RS17820 446f691edc741f893c543d0801574e34 865 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 7.6E-12 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CHH28_RS17820 446f691edc741f893c543d0801574e34 865 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 69 2.7E-11 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CHH28_RS17820 446f691edc741f893c543d0801574e34 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 1.7E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CHH28_RS17820 446f691edc741f893c543d0801574e34 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 711 725 1.7E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CHH28_RS17820 446f691edc741f893c543d0801574e34 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 678 696 1.7E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CHH28_RS17820 446f691edc741f893c543d0801574e34 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 667 1.7E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CHH28_RS17820 446f691edc741f893c543d0801574e34 865 Pfam PF07724 AAA domain (Cdc48 subfamily) 599 766 3.5E-55 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CHH28_RS17820 446f691edc741f893c543d0801574e34 865 Gene3D G3DSA:1.10.8.60 343 550 3.7E-44 T 29-03-2018 CHH28_RS17820 446f691edc741f893c543d0801574e34 865 SUPERFAMILY SSF52540 549 862 1.07E-83 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS17820 446f691edc741f893c543d0801574e34 865 Gene3D G3DSA:3.40.50.300 157 342 6.7E-25 T 29-03-2018 CHH28_RS17820 446f691edc741f893c543d0801574e34 865 SMART SM00382 198 343 1.6E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS17820 446f691edc741f893c543d0801574e34 865 SMART SM00382 600 742 1.2E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS17820 446f691edc741f893c543d0801574e34 865 Gene3D G3DSA:1.10.8.60 773 865 3.0E-23 T 29-03-2018 CHH28_RS17820 446f691edc741f893c543d0801574e34 865 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 773 852 2.2E-25 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CHH28_RS17820 446f691edc741f893c543d0801574e34 865 Gene3D G3DSA:1.10.1780.10 1 151 2.8E-35 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CHH28_RS17820 446f691edc741f893c543d0801574e34 865 Gene3D G3DSA:3.40.50.300 555 772 1.3E-55 T 29-03-2018 CHH28_RS17820 446f691edc741f893c543d0801574e34 865 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 316 2.7E-14 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CHH28_RS03900 a5d31246b6bd873611c32c59720b91ba 176 Gene3D G3DSA:1.10.10.60 124 176 9.4E-10 T 29-03-2018 CHH28_RS03900 a5d31246b6bd873611c32c59720b91ba 176 SUPERFAMILY SSF46689 92 168 1.52E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS03900 a5d31246b6bd873611c32c59720b91ba 176 Pfam PF08765 Mor transcription activator family 80 174 1.9E-17 T 29-03-2018 IPR014875 Mor transcription activator CHH28_RS03900 a5d31246b6bd873611c32c59720b91ba 176 Gene3D G3DSA:1.10.10.60 73 121 2.9E-5 T 29-03-2018 CHH28_RS05795 9e8e66a2e673bfa7dc9523caabcb342b 140 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 2 140 8.5E-44 T 29-03-2018 IPR005265 Uncharacterised protein family UPF0093 CHH28_RS05795 9e8e66a2e673bfa7dc9523caabcb342b 140 PIRSF PIRSF004638 1 140 1.5E-53 T 29-03-2018 IPR005265 Uncharacterised protein family UPF0093 CHH28_RS05795 9e8e66a2e673bfa7dc9523caabcb342b 140 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 140 1.1E-52 T 29-03-2018 IPR005265 Uncharacterised protein family UPF0093 CHH28_RS00185 e394502c4b5dd544b0be72523bd7998e 313 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 29-03-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CHH28_RS00185 e394502c4b5dd544b0be72523bd7998e 313 SMART SM01400 4 121 4.7E-74 T 29-03-2018 CHH28_RS00185 e394502c4b5dd544b0be72523bd7998e 313 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 313 3.5E-120 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CHH28_RS00185 e394502c4b5dd544b0be72523bd7998e 313 SUPERFAMILY SSF53271 69 305 8.25E-63 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CHH28_RS00185 e394502c4b5dd544b0be72523bd7998e 313 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 313 48.95 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CHH28_RS00185 e394502c4b5dd544b0be72523bd7998e 313 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 2.9E-46 T 29-03-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CHH28_RS00185 e394502c4b5dd544b0be72523bd7998e 313 Pfam PF14572 Phosphoribosyl synthetase-associated domain 203 313 1.6E-25 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CHH28_RS00185 e394502c4b5dd544b0be72523bd7998e 313 Gene3D G3DSA:3.40.50.2020 1 158 4.7E-65 T 29-03-2018 CHH28_RS00185 e394502c4b5dd544b0be72523bd7998e 313 Gene3D G3DSA:3.40.50.2020 159 290 2.1E-39 T 29-03-2018 CHH28_RS16790 9e3e1d5846779243ad4e70d42f7049a1 311 PRINTS PR00118 Beta-lactamase class A signature 55 79 1.4E-54 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CHH28_RS16790 9e3e1d5846779243ad4e70d42f7049a1 311 PRINTS PR00118 Beta-lactamase class A signature 86 103 1.4E-54 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CHH28_RS16790 9e3e1d5846779243ad4e70d42f7049a1 311 PRINTS PR00118 Beta-lactamase class A signature 160 184 1.4E-54 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CHH28_RS16790 9e3e1d5846779243ad4e70d42f7049a1 311 PRINTS PR00118 Beta-lactamase class A signature 124 149 1.4E-54 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CHH28_RS16790 9e3e1d5846779243ad4e70d42f7049a1 311 PRINTS PR00118 Beta-lactamase class A signature 186 211 1.4E-54 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CHH28_RS16790 9e3e1d5846779243ad4e70d42f7049a1 311 PRINTS PR00118 Beta-lactamase class A signature 222 237 1.4E-54 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CHH28_RS16790 9e3e1d5846779243ad4e70d42f7049a1 311 PRINTS PR00118 Beta-lactamase class A signature 239 254 1.4E-54 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CHH28_RS16790 9e3e1d5846779243ad4e70d42f7049a1 311 Pfam PF13354 Beta-lactamase enzyme family 80 269 8.1E-31 T 29-03-2018 CHH28_RS16790 9e3e1d5846779243ad4e70d42f7049a1 311 Gene3D G3DSA:3.40.710.10 47 309 1.5E-21 T 29-03-2018 CHH28_RS16790 9e3e1d5846779243ad4e70d42f7049a1 311 SUPERFAMILY SSF56601 51 308 1.03E-59 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS16790 9e3e1d5846779243ad4e70d42f7049a1 311 ProSitePatterns PS00146 Beta-lactamase class-A active site. 88 103 - T 29-03-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 CHH28_RS00160 1469cb1a94423c7884d5112c205c2e22 425 SUPERFAMILY SSF51735 160 313 1.1E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS00160 1469cb1a94423c7884d5112c205c2e22 425 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 1.5E-47 T 29-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CHH28_RS00160 1469cb1a94423c7884d5112c205c2e22 425 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 415 4.3E-24 T 29-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CHH28_RS00160 1469cb1a94423c7884d5112c205c2e22 425 Gene3D G3DSA:1.10.1200.70 330 416 2.2E-25 T 29-03-2018 CHH28_RS00160 1469cb1a94423c7884d5112c205c2e22 425 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.635 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CHH28_RS00160 1469cb1a94423c7884d5112c205c2e22 425 PIRSF PIRSF000445 1 425 4.4E-156 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CHH28_RS00160 1469cb1a94423c7884d5112c205c2e22 425 Gene3D G3DSA:3.40.50.720 159 311 1.6E-23 T 29-03-2018 CHH28_RS00160 1469cb1a94423c7884d5112c205c2e22 425 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 414 1.1E-145 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CHH28_RS00160 1469cb1a94423c7884d5112c205c2e22 425 SUPERFAMILY SSF69075 315 416 1.03E-26 T 29-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CHH28_RS00160 1469cb1a94423c7884d5112c205c2e22 425 SUPERFAMILY SSF69742 1 156 1.96E-48 T 29-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CHH28_RS00160 1469cb1a94423c7884d5112c205c2e22 425 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 5.6E-50 T 29-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 Gene3D G3DSA:2.60.120.200 1453 1671 1.9E-27 T 29-03-2018 CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 SUPERFAMILY SSF56436 634 749 1.92E-10 T 29-03-2018 IPR016187 C-type lectin fold CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 SUPERFAMILY SSF56436 82 147 2.58E-5 T 29-03-2018 IPR016187 C-type lectin fold CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 SUPERFAMILY SSF56436 196 250 2.58E-5 T 29-03-2018 IPR016187 C-type lectin fold CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 ProSitePatterns PS00615 C-type lectin domain signature. 42 65 - T 29-03-2018 IPR018378 C-type lectin, conserved site CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 SUPERFAMILY SSF49899 1457 1666 3.26E-25 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 Gene3D G3DSA:3.10.100.10 767 880 0.082 T 29-03-2018 IPR016186 C-type lectin-like/link domain CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 Gene3D G3DSA:3.10.100.10 404 502 3.5E-6 T 29-03-2018 IPR016186 C-type lectin-like/link domain CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 Gene3D G3DSA:3.10.100.10 624 754 2.0E-9 T 29-03-2018 IPR016186 C-type lectin-like/link domain CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 SMART SM00034 241 385 0.41 T 29-03-2018 IPR001304 C-type lectin-like CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 SMART SM00034 491 619 9.4E-4 T 29-03-2018 IPR001304 C-type lectin-like CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 SMART SM00034 1015 1133 3.7E-7 T 29-03-2018 IPR001304 C-type lectin-like CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 SUPERFAMILY SSF141072 1941 2072 1.28E-5 T 29-03-2018 CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 ProSitePatterns PS00615 C-type lectin domain signature. 362 384 - T 29-03-2018 IPR018378 C-type lectin, conserved site CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 Gene3D G3DSA:3.10.100.10 1017 1135 6.8E-12 T 29-03-2018 IPR016186 C-type lectin-like/link domain CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 SUPERFAMILY SSF141072 1675 1787 6.8E-8 T 29-03-2018 CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 Gene3D G3DSA:3.10.100.10 1151 1265 0.029 T 29-03-2018 IPR016186 C-type lectin-like/link domain CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 Gene3D G3DSA:3.10.100.10 503 623 5.7E-9 T 29-03-2018 IPR016186 C-type lectin-like/link domain CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 Gene3D G3DSA:3.10.100.10 74 256 1.3E-9 T 29-03-2018 IPR016186 C-type lectin-like/link domain CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 Gene3D G3DSA:3.10.100.10 279 389 4.3E-12 T 29-03-2018 IPR016186 C-type lectin-like/link domain CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 SUPERFAMILY SSF56436 1276 1343 4.02E-5 T 29-03-2018 IPR016187 C-type lectin fold CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 Gene3D G3DSA:3.10.100.10 10 73 0.0012 T 29-03-2018 IPR016186 C-type lectin-like/link domain CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 SUPERFAMILY SSF56436 512 618 1.5E-10 T 29-03-2018 IPR016187 C-type lectin fold CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 SUPERFAMILY SSF56436 304 384 2.62E-12 T 29-03-2018 IPR016187 C-type lectin fold CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 Pfam PF03160 Calx-beta domain 1822 1876 0.054 T 29-03-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 Pfam PF03160 Calx-beta domain 2027 2052 35.0 T 29-03-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 Pfam PF03160 Calx-beta domain 1679 1741 0.13 T 29-03-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 Pfam PF00059 Lectin C-type domain 1036 1133 5.8E-5 T 29-03-2018 IPR001304 C-type lectin-like CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 SUPERFAMILY SSF56436 1018 1133 4.55E-13 T 29-03-2018 IPR016187 C-type lectin fold CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 SUPERFAMILY SSF141072 1817 1936 1.44E-9 T 29-03-2018 CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 ProSitePatterns PS00615 C-type lectin domain signature. 223 249 - T 29-03-2018 IPR018378 C-type lectin, conserved site CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 Gene3D G3DSA:3.10.100.10 902 1016 0.023 T 29-03-2018 IPR016186 C-type lectin-like/link domain CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 Gene3D G3DSA:3.10.100.10 1268 1410 0.0019 T 29-03-2018 IPR016186 C-type lectin-like/link domain CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 SUPERFAMILY SSF56436 438 500 7.52E-7 T 29-03-2018 IPR016187 C-type lectin fold CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 ProSitePatterns PS00615 C-type lectin domain signature. 595 618 - T 29-03-2018 IPR018378 C-type lectin, conserved site CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 1518 1666 1.9E-16 T 29-03-2018 CHH28_RS10960 25df303feac97af38f82271c771f4839 2486 SUPERFAMILY SSF56436 27 66 3.15E-5 T 29-03-2018 IPR016187 C-type lectin fold CHH28_RS13295 b4556e09563115acc6edb49d53bbcc91 273 SUPERFAMILY SSF55620 177 259 4.3E-8 T 29-03-2018 CHH28_RS13295 b4556e09563115acc6edb49d53bbcc91 273 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 273 131.38 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CHH28_RS13295 b4556e09563115acc6edb49d53bbcc91 273 PIRSF PIRSF004750 3 273 1.6E-111 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CHH28_RS13295 b4556e09563115acc6edb49d53bbcc91 273 Pfam PF14489 QueF-like protein 186 261 9.0E-24 T 29-03-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CHH28_RS13295 b4556e09563115acc6edb49d53bbcc91 273 Gene3D G3DSA:3.30.1130.10 17 132 2.1E-37 T 29-03-2018 CHH28_RS13295 b4556e09563115acc6edb49d53bbcc91 273 Gene3D G3DSA:3.30.1130.10 138 273 3.2E-42 T 29-03-2018 CHH28_RS13295 b4556e09563115acc6edb49d53bbcc91 273 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 17 126 4.2E-45 T 29-03-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CHH28_RS13295 b4556e09563115acc6edb49d53bbcc91 273 TIGRFAM TIGR03138 QueF: queuine synthase 7 273 1.9E-116 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CHH28_RS17855 6be7a6dfad7a077887c580b97a7a6087 763 Gene3D G3DSA:3.60.20.10 251 590 2.2E-57 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS17855 6be7a6dfad7a077887c580b97a7a6087 763 Gene3D G3DSA:3.60.20.10 591 750 1.9E-15 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS17855 6be7a6dfad7a077887c580b97a7a6087 763 Pfam PF01804 Penicillin amidase 57 747 4.0E-123 T 29-03-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 CHH28_RS17855 6be7a6dfad7a077887c580b97a7a6087 763 SUPERFAMILY SSF56235 54 753 4.63E-122 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS17855 6be7a6dfad7a077887c580b97a7a6087 763 Gene3D G3DSA:1.10.439.10 45 215 1.0E-28 T 29-03-2018 IPR023343 Penicillin amidase type, domain1 GO:0016811 CHH28_RS17855 6be7a6dfad7a077887c580b97a7a6087 763 PIRSF PIRSF001227 12 757 3.7E-88 T 29-03-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 CHH28_RS18760 b5b74b21f597f1302bf591c87a25caf7 116 Pfam PF01627 Hpt domain 26 107 5.6E-12 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS18760 b5b74b21f597f1302bf591c87a25caf7 116 Gene3D G3DSA:1.20.120.160 1 116 3.3E-20 T 29-03-2018 CHH28_RS18760 b5b74b21f597f1302bf591c87a25caf7 116 SMART SM00073 17 114 4.3E-9 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS18760 b5b74b21f597f1302bf591c87a25caf7 116 SUPERFAMILY SSF47226 5 115 5.63E-26 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS08845 18bf2836c262d9ac8a97f34266a01a3b 64 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 56 9.8E-30 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CHH28_RS08845 18bf2836c262d9ac8a97f34266a01a3b 64 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-11 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CHH28_RS08845 18bf2836c262d9ac8a97f34266a01a3b 64 SUPERFAMILY SSF117130 1 54 7.72E-21 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CHH28_RS08845 18bf2836c262d9ac8a97f34266a01a3b 64 Pfam PF02599 Global regulator protein family 1 52 1.5E-26 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CHH28_RS08845 18bf2836c262d9ac8a97f34266a01a3b 64 Hamap MF_00167 Carbon storage regulator [csrA]. 1 63 21.313 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CHH28_RS04985 cdd68fe78f8f1ada4501054e79c34e6c 675 SUPERFAMILY SSF52540 5 645 3.79E-162 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS04985 cdd68fe78f8f1ada4501054e79c34e6c 675 Gene3D G3DSA:3.40.50.300 278 380 2.2E-26 T 29-03-2018 CHH28_RS04985 cdd68fe78f8f1ada4501054e79c34e6c 675 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 6 672 4.8E-304 T 29-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CHH28_RS04985 cdd68fe78f8f1ada4501054e79c34e6c 675 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 5 673 38.932 T 29-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CHH28_RS04985 cdd68fe78f8f1ada4501054e79c34e6c 675 Pfam PF13361 UvrD-like helicase C-terminal domain 275 618 1.3E-66 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CHH28_RS04985 cdd68fe78f8f1ada4501054e79c34e6c 675 Gene3D G3DSA:3.40.50.300 5 275 4.2E-50 T 29-03-2018 CHH28_RS04985 cdd68fe78f8f1ada4501054e79c34e6c 675 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 269 1.6E-69 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CHH28_RS04985 cdd68fe78f8f1ada4501054e79c34e6c 675 Gene3D G3DSA:1.10.486.10 381 559 1.2E-36 T 29-03-2018 CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 SUPERFAMILY SSF82714 187 269 3.27E-11 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 SUPERFAMILY SSF82866 295 494 3.4E-37 T 29-03-2018 CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 Gene3D G3DSA:1.20.1640.10 286 507 1.4E-34 T 29-03-2018 CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 5.5E-28 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 5.5E-28 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 5.5E-28 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 5.5E-28 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 5.5E-28 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 PRINTS PR00702 Acriflavin resistance protein family signature 13 37 5.5E-28 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 Gene3D G3DSA:3.30.70.1430 43 147 1.7E-27 T 29-03-2018 CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 Gene3D G3DSA:3.30.70.1430 561 721 1.6E-11 T 29-03-2018 CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 Gene3D G3DSA:1.20.1640.10 823 1016 1.9E-40 T 29-03-2018 CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 SUPERFAMILY SSF82693 273 328 5.93E-20 T 29-03-2018 CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 SUPERFAMILY SSF82693 139 185 5.93E-20 T 29-03-2018 CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 Pfam PF00873 AcrB/AcrD/AcrF family 8 1015 8.2E-164 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 SUPERFAMILY SSF82693 43 138 2.27E-19 T 29-03-2018 CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 Gene3D G3DSA:3.30.2090.10 184 272 4.0E-11 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 SUPERFAMILY SSF82866 796 1018 3.14E-46 T 29-03-2018 CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 Gene3D G3DSA:3.30.2090.10 722 794 1.3E-7 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS12460 eeef786a61ddbfcfaaeebe08cf9cf699 1021 SUPERFAMILY SSF82714 715 793 4.19E-6 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS16090 04e9e1b1d0ab9b29d67a2458f3eb286c 391 Pfam PF00108 Thiolase, N-terminal domain 8 256 2.1E-80 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CHH28_RS16090 04e9e1b1d0ab9b29d67a2458f3eb286c 391 SUPERFAMILY SSF53901 266 390 7.15E-43 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS16090 04e9e1b1d0ab9b29d67a2458f3eb286c 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CHH28_RS16090 04e9e1b1d0ab9b29d67a2458f3eb286c 391 Pfam PF02803 Thiolase, C-terminal domain 265 389 5.0E-48 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CHH28_RS16090 04e9e1b1d0ab9b29d67a2458f3eb286c 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CHH28_RS16090 04e9e1b1d0ab9b29d67a2458f3eb286c 391 Gene3D G3DSA:3.40.47.10 5 260 2.1E-50 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS16090 04e9e1b1d0ab9b29d67a2458f3eb286c 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CHH28_RS16090 04e9e1b1d0ab9b29d67a2458f3eb286c 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 59.457 T 29-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CHH28_RS16090 04e9e1b1d0ab9b29d67a2458f3eb286c 391 PIRSF PIRSF000429 2 391 5.8E-134 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CHH28_RS16090 04e9e1b1d0ab9b29d67a2458f3eb286c 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 390 1.6E-204 T 29-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CHH28_RS16090 04e9e1b1d0ab9b29d67a2458f3eb286c 391 SUPERFAMILY SSF53901 4 263 5.24E-75 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS16090 04e9e1b1d0ab9b29d67a2458f3eb286c 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 5.2E-138 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CHH28_RS16090 04e9e1b1d0ab9b29d67a2458f3eb286c 391 Gene3D G3DSA:3.40.47.10 261 388 8.9E-34 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1013 1023 2.7E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1026 1044 2.7E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1055 1068 2.7E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 PRINTS PR00344 Bacterial sensor protein C-terminal signature 995 1009 2.7E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 SUPERFAMILY SSF53850 535 762 1.27E-38 T 29-03-2018 CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 Pfam PF00512 His Kinase A (phospho-acceptor) domain 829 907 4.6E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 SMART SM00387 958 1071 2.6E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 Gene3D G3DSA:3.40.190.10 654 717 9.1E-4 T 29-03-2018 CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 SUPERFAMILY SSF53850 54 276 6.66E-45 T 29-03-2018 CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 Gene3D G3DSA:3.40.190.10 287 396 1.7E-18 T 29-03-2018 CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 SMART SM00388 828 912 0.002 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 SUPERFAMILY SSF47384 824 863 3.73E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 274 7.4E-36 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 297 518 1.1E-39 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 544 759 2.1E-28 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 Gene3D G3DSA:3.40.190.10 397 474 2.7E-13 T 29-03-2018 CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 SUPERFAMILY SSF53850 297 519 2.17E-48 T 29-03-2018 CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 Gene3D G3DSA:3.40.190.10 193 273 0.0045 T 29-03-2018 CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 Gene3D G3DSA:3.40.190.10 526 653 8.1E-19 T 29-03-2018 CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 Gene3D G3DSA:1.10.287.130 816 907 1.0E-7 T 29-03-2018 CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 SUPERFAMILY SSF55874 911 1069 1.28E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 962 1069 7.5E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 SMART SM00062 52 276 9.2E-21 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 SMART SM00062 542 761 5.0E-28 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 SMART SM00062 296 520 9.3E-30 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 Gene3D G3DSA:3.40.190.10 42 192 9.5E-24 T 29-03-2018 CHH28_RS14415 43d5e7def53e3d599c303eae9d496923 1076 Gene3D G3DSA:3.30.565.10 915 1075 7.6E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS16270 d7196f072a6e85d870fd4ef6b3a45ccf 199 Gene3D G3DSA:3.30.70.20 129 150 3.0E-10 T 29-03-2018 CHH28_RS16270 d7196f072a6e85d870fd4ef6b3a45ccf 199 Gene3D G3DSA:3.30.70.20 28 128 3.3E-10 T 29-03-2018 CHH28_RS16270 d7196f072a6e85d870fd4ef6b3a45ccf 199 SUPERFAMILY SSF54862 40 178 1.21E-31 T 29-03-2018 CHH28_RS16270 d7196f072a6e85d870fd4ef6b3a45ccf 199 Pfam PF14697 4Fe-4S dicluster domain 112 166 6.3E-18 T 29-03-2018 CHH28_RS16270 d7196f072a6e85d870fd4ef6b3a45ccf 199 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CHH28_RS16270 d7196f072a6e85d870fd4ef6b3a45ccf 199 Pfam PF04060 Putative Fe-S cluster 47 78 2.6E-14 T 29-03-2018 IPR007202 4Fe-4S domain GO:0051536 CHH28_RS16270 d7196f072a6e85d870fd4ef6b3a45ccf 199 PIRSF PIRSF005784 6 192 2.1E-88 T 29-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 CHH28_RS16270 d7196f072a6e85d870fd4ef6b3a45ccf 199 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 6 190 5.7E-86 T 29-03-2018 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 CHH28_RS16270 d7196f072a6e85d870fd4ef6b3a45ccf 199 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 7 187 42.727 T 29-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 CHH28_RS16270 d7196f072a6e85d870fd4ef6b3a45ccf 199 Gene3D G3DSA:3.30.70.20 151 185 3.8E-6 T 29-03-2018 CHH28_RS11890 16b1a7a2d940f08ae6fdff5716f44885 181 Gene3D G3DSA:3.10.20.80 13 88 2.4E-25 T 29-03-2018 CHH28_RS11890 16b1a7a2d940f08ae6fdff5716f44885 181 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 7 180 27.994 T 29-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CHH28_RS11890 16b1a7a2d940f08ae6fdff5716f44885 181 SUPERFAMILY SSF55200 93 181 3.53E-33 T 29-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CHH28_RS11890 16b1a7a2d940f08ae6fdff5716f44885 181 SUPERFAMILY SSF54364 17 88 9.81E-23 T 29-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CHH28_RS11890 16b1a7a2d940f08ae6fdff5716f44885 181 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 18 180 8.9E-61 T 29-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CHH28_RS11890 16b1a7a2d940f08ae6fdff5716f44885 181 Gene3D G3DSA:3.30.110.10 89 181 3.5E-35 T 29-03-2018 CHH28_RS11890 16b1a7a2d940f08ae6fdff5716f44885 181 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 93 177 1.8E-38 T 29-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CHH28_RS11890 16b1a7a2d940f08ae6fdff5716f44885 181 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 18 86 4.5E-25 T 29-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CHH28_RS14625 86a02b191c82f6f65fc31dd5c4746517 326 Gene3D G3DSA:3.40.630.30 136 281 1.3E-16 T 29-03-2018 CHH28_RS14625 86a02b191c82f6f65fc31dd5c4746517 326 Pfam PF13302 Acetyltransferase (GNAT) domain 142 273 8.5E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS14625 86a02b191c82f6f65fc31dd5c4746517 326 SUPERFAMILY SSF55729 139 277 9.84E-21 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS18690 132def9ef742f2538b85dd7d525e7ada 128 SUPERFAMILY SSF52172 3 125 4.13E-37 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS18690 132def9ef742f2538b85dd7d525e7ada 128 SMART SM00448 5 119 5.8E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS18690 132def9ef742f2538b85dd7d525e7ada 128 Pfam PF00072 Response regulator receiver domain 7 119 9.8E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS18690 132def9ef742f2538b85dd7d525e7ada 128 Gene3D G3DSA:3.40.50.2300 2 127 1.8E-37 T 29-03-2018 CHH28_RS17875 f27c41f5f9c30cb732eceef799d9d1a9 244 SUPERFAMILY SSF53850 20 244 1.63E-34 T 29-03-2018 CHH28_RS17875 f27c41f5f9c30cb732eceef799d9d1a9 244 SMART SM00062 19 244 3.4E-4 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS17875 f27c41f5f9c30cb732eceef799d9d1a9 244 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 244 3.9E-23 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS17875 f27c41f5f9c30cb732eceef799d9d1a9 244 Gene3D G3DSA:3.40.190.10 10 244 2.5E-22 T 29-03-2018 CHH28_RS13480 b0dc31cab08b3ea2bff106fc40e67e31 408 ProSitePatterns PS01219 Ammonium transporters signature. 168 193 - T 29-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CHH28_RS13480 b0dc31cab08b3ea2bff106fc40e67e31 408 Gene3D G3DSA:1.10.3430.10 13 386 4.0E-89 T 29-03-2018 CHH28_RS13480 b0dc31cab08b3ea2bff106fc40e67e31 408 SUPERFAMILY SSF111352 17 386 1.11E-92 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CHH28_RS13480 b0dc31cab08b3ea2bff106fc40e67e31 408 Pfam PF00909 Ammonium Transporter Family 24 401 7.3E-89 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CHH28_RS05320 ee6ce1a3f0ea77f0a0d8471f8bea8627 318 Gene3D G3DSA:1.10.10.10 244 278 0.0033 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS05320 ee6ce1a3f0ea77f0a0d8471f8bea8627 318 SUPERFAMILY SSF46689 264 311 3.72E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS05320 ee6ce1a3f0ea77f0a0d8471f8bea8627 318 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 12 156 8.9E-15 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS05320 ee6ce1a3f0ea77f0a0d8471f8bea8627 318 Pfam PF12833 Helix-turn-helix domain 235 310 2.7E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS05320 ee6ce1a3f0ea77f0a0d8471f8bea8627 318 Gene3D G3DSA:1.10.10.60 279 315 6.8E-12 T 29-03-2018 CHH28_RS05320 ee6ce1a3f0ea77f0a0d8471f8bea8627 318 Gene3D G3DSA:1.10.10.60 205 243 1.8E-5 T 29-03-2018 CHH28_RS05320 ee6ce1a3f0ea77f0a0d8471f8bea8627 318 SMART SM00342 227 309 5.1E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS05320 ee6ce1a3f0ea77f0a0d8471f8bea8627 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 278 293 6.4E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS05320 ee6ce1a3f0ea77f0a0d8471f8bea8627 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 293 309 6.4E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS14895 3f115d6db0f951a20e851ae6675a16ef 61 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 57 3.7E-17 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS14895 3f115d6db0f951a20e851ae6675a16ef 61 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 56 16.475 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS14895 3f115d6db0f951a20e851ae6675a16ef 61 Pfam PF01783 Ribosomal L32p protein family 2 57 1.9E-18 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS14895 3f115d6db0f951a20e851ae6675a16ef 61 SUPERFAMILY SSF57829 2 57 1.59E-17 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CHH28_RS04275 47694f316cb5f5748db644976836e4d5 318 PIRSF PIRSF002936 11 318 2.4E-135 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CHH28_RS04275 47694f316cb5f5748db644976836e4d5 318 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 40 273 4.3E-54 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CHH28_RS04275 47694f316cb5f5748db644976836e4d5 318 SUPERFAMILY SSF52402 16 219 8.38E-68 T 29-03-2018 CHH28_RS04275 47694f316cb5f5748db644976836e4d5 318 Gene3D G3DSA:3.40.50.620 13 286 1.5E-39 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS04275 47694f316cb5f5748db644976836e4d5 318 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 19 318 9.2E-140 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CHH28_RS01320 bfc4aaaee249d4b8e3cdd25550a2a224 222 Gene3D G3DSA:3.90.550.10 1 119 5.2E-37 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS01320 bfc4aaaee249d4b8e3cdd25550a2a224 222 Pfam PF00483 Nucleotidyl transferase 2 117 4.0E-21 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CHH28_RS01320 bfc4aaaee249d4b8e3cdd25550a2a224 222 SUPERFAMILY SSF53448 2 217 4.38E-49 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS09485 f496504652459099927a8427084c7c22 289 TIGRFAM TIGR01932 hflC: HflC protein 146 284 1.0E-50 T 29-03-2018 IPR010200 HflC GO:0016021|GO:0052547 CHH28_RS09485 f496504652459099927a8427084c7c22 289 SUPERFAMILY SSF117892 54 192 7.19E-29 T 29-03-2018 IPR001107 Band 7 domain CHH28_RS09485 f496504652459099927a8427084c7c22 289 Pfam PF01145 SPFH domain / Band 7 family 25 201 1.2E-32 T 29-03-2018 IPR001107 Band 7 domain CHH28_RS09485 f496504652459099927a8427084c7c22 289 PIRSF PIRSF005651 1 289 7.6E-97 T 29-03-2018 IPR010200 HflC GO:0016021|GO:0052547 CHH28_RS09485 f496504652459099927a8427084c7c22 289 SMART SM00244 21 185 4.7E-33 T 29-03-2018 IPR001107 Band 7 domain CHH28_RS02835 5f724be4c42fde39e65fa1fc5aa3f54e 559 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 6 554 44.595 T 29-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CHH28_RS02835 5f724be4c42fde39e65fa1fc5aa3f54e 559 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 19 554 1.5E-224 T 29-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CHH28_RS02835 5f724be4c42fde39e65fa1fc5aa3f54e 559 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 462 473 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CHH28_RS02835 5f724be4c42fde39e65fa1fc5aa3f54e 559 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 124 134 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CHH28_RS02835 5f724be4c42fde39e65fa1fc5aa3f54e 559 SUPERFAMILY SSF52016 377 555 5.89E-59 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CHH28_RS02835 5f724be4c42fde39e65fa1fc5aa3f54e 559 Pfam PF00920 Dehydratase family 36 551 2.7E-212 T 29-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CHH28_RS02835 5f724be4c42fde39e65fa1fc5aa3f54e 559 SUPERFAMILY SSF143975 3 373 3.27E-132 T 29-03-2018 CHH28_RS11040 94e6fbda4d7343116b6c59fc65a41fc8 257 Pfam PF00005 ABC transporter 23 182 1.7E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS11040 94e6fbda4d7343116b6c59fc65a41fc8 257 PIRSF PIRSF039085 4 257 1.3E-117 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CHH28_RS11040 94e6fbda4d7343116b6c59fc65a41fc8 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS11040 94e6fbda4d7343116b6c59fc65a41fc8 257 Gene3D G3DSA:3.40.50.300 5 257 6.9E-75 T 29-03-2018 CHH28_RS11040 94e6fbda4d7343116b6c59fc65a41fc8 257 SUPERFAMILY SSF52540 8 252 1.16E-76 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11040 94e6fbda4d7343116b6c59fc65a41fc8 257 SMART SM00382 32 229 1.6E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS12300 705f37b10c142bc13e26daee968343bc 204 Gene3D G3DSA:1.10.357.10 7 195 1.5E-27 T 29-03-2018 CHH28_RS12300 705f37b10c142bc13e26daee968343bc 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 5.0E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS12300 705f37b10c142bc13e26daee968343bc 204 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 202 90.635 T 29-03-2018 IPR017757 Transcriptional repressor BetI CHH28_RS12300 705f37b10c142bc13e26daee968343bc 204 SUPERFAMILY SSF46689 7 78 7.98E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS12300 705f37b10c142bc13e26daee968343bc 204 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 86 193 7.1E-30 T 29-03-2018 CHH28_RS12300 705f37b10c142bc13e26daee968343bc 204 SUPERFAMILY SSF48498 85 195 2.11E-17 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CHH28_RS12300 705f37b10c142bc13e26daee968343bc 204 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 194 1.3E-71 T 29-03-2018 IPR017757 Transcriptional repressor BetI CHH28_RS05355 1484e546bd5daa7f90cc696307913b72 344 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 2.5E-152 T 29-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 CHH28_RS05355 1484e546bd5daa7f90cc696307913b72 344 Gene3D G3DSA:3.30.450.90 1 100 4.6E-24 T 29-03-2018 CHH28_RS05355 1484e546bd5daa7f90cc696307913b72 344 Gene3D G3DSA:3.40.50.300 101 272 5.1E-27 T 29-03-2018 CHH28_RS05355 1484e546bd5daa7f90cc696307913b72 344 Gene3D G3DSA:3.40.50.300 273 344 1.3E-14 T 29-03-2018 CHH28_RS05355 1484e546bd5daa7f90cc696307913b72 344 SMART SM00382 122 256 8.5E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS05355 1484e546bd5daa7f90cc696307913b72 344 Pfam PF00437 Type II/IV secretion system protein 11 270 2.4E-46 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CHH28_RS05355 1484e546bd5daa7f90cc696307913b72 344 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CHH28_RS05355 1484e546bd5daa7f90cc696307913b72 344 SUPERFAMILY SSF52540 5 335 4.73E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS17740 c8d4475ae3b614d87331752c0efc20c4 193 SUPERFAMILY SSF50891 36 191 6.14E-54 T 29-03-2018 IPR029000 Cyclophilin-like domain CHH28_RS17740 c8d4475ae3b614d87331752c0efc20c4 193 Gene3D G3DSA:2.40.100.10 14 193 1.8E-50 T 29-03-2018 IPR029000 Cyclophilin-like domain CHH28_RS17740 c8d4475ae3b614d87331752c0efc20c4 193 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 50 65 7.5E-10 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CHH28_RS17740 c8d4475ae3b614d87331752c0efc20c4 193 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 88 7.5E-10 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CHH28_RS17740 c8d4475ae3b614d87331752c0efc20c4 193 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 150 165 7.5E-10 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CHH28_RS17740 c8d4475ae3b614d87331752c0efc20c4 193 PIRSF PIRSF001467 10 193 1.4E-29 T 29-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CHH28_RS17740 c8d4475ae3b614d87331752c0efc20c4 193 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 37 188 1.7E-46 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CHH28_RS17740 c8d4475ae3b614d87331752c0efc20c4 193 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 71 88 - T 29-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CHH28_RS08470 23e6e17190712bd331f356e53399e05c 133 Gene3D G3DSA:2.30.30.220 5 102 2.7E-39 T 29-03-2018 IPR007481 Stringent starvation protein B CHH28_RS08470 23e6e17190712bd331f356e53399e05c 133 Pfam PF04386 Stringent starvation protein B 4 119 3.3E-33 T 29-03-2018 IPR007481 Stringent starvation protein B CHH28_RS08470 23e6e17190712bd331f356e53399e05c 133 PIRSF PIRSF005276 1 133 1.6E-50 T 29-03-2018 IPR007481 Stringent starvation protein B CHH28_RS08470 23e6e17190712bd331f356e53399e05c 133 SUPERFAMILY SSF101738 1 110 8.37E-44 T 29-03-2018 IPR007481 Stringent starvation protein B CHH28_RS08515 399b05a2014945ea710146bc24794e0b 142 Gene3D G3DSA:3.40.630.30 1 83 8.4E-13 T 29-03-2018 CHH28_RS08515 399b05a2014945ea710146bc24794e0b 142 Gene3D G3DSA:3.40.630.30 84 139 3.2E-12 T 29-03-2018 CHH28_RS08515 399b05a2014945ea710146bc24794e0b 142 SUPERFAMILY SSF55729 1 135 1.22E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS08515 399b05a2014945ea710146bc24794e0b 142 Pfam PF13508 Acetyltransferase (GNAT) domain 48 120 8.2E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS12270 a6731d76378ca8a3290d1402fa259d1c 228 SMART SM00448 5 119 7.2E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS12270 a6731d76378ca8a3290d1402fa259d1c 228 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS12270 a6731d76378ca8a3290d1402fa259d1c 228 Gene3D G3DSA:3.40.50.2300 4 127 3.0E-26 T 29-03-2018 CHH28_RS12270 a6731d76378ca8a3290d1402fa259d1c 228 SUPERFAMILY SSF46894 139 212 1.05E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CHH28_RS12270 a6731d76378ca8a3290d1402fa259d1c 228 Pfam PF00072 Response regulator receiver domain 7 119 6.7E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS12270 a6731d76378ca8a3290d1402fa259d1c 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 206 2.1E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS12270 a6731d76378ca8a3290d1402fa259d1c 228 Gene3D G3DSA:1.10.10.10 128 217 2.7E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS12270 a6731d76378ca8a3290d1402fa259d1c 228 SUPERFAMILY SSF52172 6 134 3.98E-26 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS12270 a6731d76378ca8a3290d1402fa259d1c 228 SMART SM00421 151 208 1.0E-21 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS12270 a6731d76378ca8a3290d1402fa259d1c 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.5E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS12270 a6731d76378ca8a3290d1402fa259d1c 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.5E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS12270 a6731d76378ca8a3290d1402fa259d1c 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.5E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS09750 cb950436ca8c692da17e426cdd01c2bc 203 Pfam PF01121 Dephospho-CoA kinase 5 181 4.5E-62 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CHH28_RS09750 cb950436ca8c692da17e426cdd01c2bc 203 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 3 197 27.406 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CHH28_RS09750 cb950436ca8c692da17e426cdd01c2bc 203 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 6 189 2.6E-56 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CHH28_RS09750 cb950436ca8c692da17e426cdd01c2bc 203 Gene3D G3DSA:3.40.50.300 2 203 2.4E-44 T 29-03-2018 CHH28_RS09750 cb950436ca8c692da17e426cdd01c2bc 203 SUPERFAMILY SSF52540 4 198 2.28E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS18970 540ad17096d2cb5a7e7d45e93b873878 273 Gene3D G3DSA:3.40.50.150 72 272 1.2E-45 T 29-03-2018 CHH28_RS18970 540ad17096d2cb5a7e7d45e93b873878 273 Pfam PF01739 CheR methyltransferase, SAM binding domain 73 266 1.1E-58 T 29-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CHH28_RS18970 540ad17096d2cb5a7e7d45e93b873878 273 SMART SM00138 7 270 7.5E-88 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS18970 540ad17096d2cb5a7e7d45e93b873878 273 Pfam PF03705 CheR methyltransferase, all-alpha domain 8 55 3.4E-8 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CHH28_RS18970 540ad17096d2cb5a7e7d45e93b873878 273 Gene3D G3DSA:1.10.155.10 1 71 1.6E-10 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CHH28_RS18970 540ad17096d2cb5a7e7d45e93b873878 273 SUPERFAMILY SSF53335 73 266 1.14E-47 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS18970 540ad17096d2cb5a7e7d45e93b873878 273 SUPERFAMILY SSF47757 3 72 4.45E-13 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CHH28_RS18970 540ad17096d2cb5a7e7d45e93b873878 273 PRINTS PR00996 Glutamate methyltransferase family signature 29 42 7.0E-41 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS18970 540ad17096d2cb5a7e7d45e93b873878 273 PRINTS PR00996 Glutamate methyltransferase family signature 229 252 7.0E-41 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS18970 540ad17096d2cb5a7e7d45e93b873878 273 PRINTS PR00996 Glutamate methyltransferase family signature 66 78 7.0E-41 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS18970 540ad17096d2cb5a7e7d45e93b873878 273 PRINTS PR00996 Glutamate methyltransferase family signature 210 224 7.0E-41 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS18970 540ad17096d2cb5a7e7d45e93b873878 273 PRINTS PR00996 Glutamate methyltransferase family signature 103 123 7.0E-41 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS18970 540ad17096d2cb5a7e7d45e93b873878 273 PRINTS PR00996 Glutamate methyltransferase family signature 141 157 7.0E-41 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS12595 89973afec974fa80a8bc3770d37c3696 179 Gene3D G3DSA:3.30.1330.60 50 179 5.5E-35 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS12595 89973afec974fa80a8bc3770d37c3696 179 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 75 177 3.6E-41 T 29-03-2018 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 CHH28_RS12595 89973afec974fa80a8bc3770d37c3696 179 SUPERFAMILY SSF103088 72 177 2.75E-34 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS12595 89973afec974fa80a8bc3770d37c3696 179 Pfam PF00691 OmpA family 76 171 1.0E-20 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS12595 89973afec974fa80a8bc3770d37c3696 179 PRINTS PR01021 OMPA domain signature 77 99 3.3E-16 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CHH28_RS12595 89973afec974fa80a8bc3770d37c3696 179 PRINTS PR01021 OMPA domain signature 122 138 3.3E-16 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CHH28_RS12595 89973afec974fa80a8bc3770d37c3696 179 PRINTS PR01021 OMPA domain signature 107 122 3.3E-16 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CHH28_RS02385 2fbdcd6db9922619193b4936d25cd36e 378 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 325 367 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CHH28_RS02385 2fbdcd6db9922619193b4936d25cd36e 378 Gene3D G3DSA:1.10.10.60 326 378 1.8E-15 T 29-03-2018 CHH28_RS02385 2fbdcd6db9922619193b4936d25cd36e 378 SMART SM00342 288 371 1.7E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS02385 2fbdcd6db9922619193b4936d25cd36e 378 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 355 371 6.7E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS02385 2fbdcd6db9922619193b4936d25cd36e 378 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 340 355 6.7E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS02385 2fbdcd6db9922619193b4936d25cd36e 378 Gene3D G3DSA:1.10.10.60 266 325 1.2E-5 T 29-03-2018 CHH28_RS02385 2fbdcd6db9922619193b4936d25cd36e 378 Pfam PF12833 Helix-turn-helix domain 294 373 5.4E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS02385 2fbdcd6db9922619193b4936d25cd36e 378 SUPERFAMILY SSF46689 324 375 5.02E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS07300 cdf17136db623d8bc7292d99f9993a2c 157 Pfam PF00583 Acetyltransferase (GNAT) family 39 133 2.6E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS07300 cdf17136db623d8bc7292d99f9993a2c 157 Gene3D G3DSA:3.40.630.30 1 157 4.1E-21 T 29-03-2018 CHH28_RS07300 cdf17136db623d8bc7292d99f9993a2c 157 SUPERFAMILY SSF55729 1 151 4.66E-24 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS16140 39d0e8cc700f5d1191333689b864c5bd 291 Pfam PF03466 LysR substrate binding domain 97 288 1.6E-22 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS16140 39d0e8cc700f5d1191333689b864c5bd 291 SUPERFAMILY SSF46785 12 118 2.49E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS16140 39d0e8cc700f5d1191333689b864c5bd 291 SUPERFAMILY SSF53850 98 290 3.44E-26 T 29-03-2018 CHH28_RS16140 39d0e8cc700f5d1191333689b864c5bd 291 Gene3D G3DSA:1.10.10.10 7 94 4.9E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS16140 39d0e8cc700f5d1191333689b864c5bd 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 73 4.4E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS16140 39d0e8cc700f5d1191333689b864c5bd 291 Gene3D G3DSA:3.40.190.10 99 173 5.5E-15 T 29-03-2018 CHH28_RS16140 39d0e8cc700f5d1191333689b864c5bd 291 Gene3D G3DSA:3.40.190.10 174 260 6.6E-11 T 29-03-2018 CHH28_RS11755 5f285764b50666f22a8317a96bea623d 207 Gene3D G3DSA:3.30.1060.10 26 205 4.5E-74 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CHH28_RS11755 5f285764b50666f22a8317a96bea623d 207 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 46 198 1.1E-63 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CHH28_RS11755 5f285764b50666f22a8317a96bea623d 207 SUPERFAMILY SSF55068 8 203 4.05E-74 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CHH28_RS11755 5f285764b50666f22a8317a96bea623d 207 Pfam PF01625 Peptide methionine sulfoxide reductase 46 198 6.7E-65 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CHH28_RS11755 5f285764b50666f22a8317a96bea623d 207 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 204 35.558 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CHH28_RS06860 b18860c9fa3e0a588ec6d6e45479c0b7 80 Pfam PF02609 Exonuclease VII small subunit 10 60 3.3E-20 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CHH28_RS06860 b18860c9fa3e0a588ec6d6e45479c0b7 80 SUPERFAMILY SSF116842 4 71 3.27E-21 T 29-03-2018 CHH28_RS06860 b18860c9fa3e0a588ec6d6e45479c0b7 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 64 8.3E-22 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CHH28_RS06860 b18860c9fa3e0a588ec6d6e45479c0b7 80 Gene3D G3DSA:1.10.287.1040 7 74 1.7E-23 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CHH28_RS06860 b18860c9fa3e0a588ec6d6e45479c0b7 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 10 51 2.0E-8 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CHH28_RS06860 b18860c9fa3e0a588ec6d6e45479c0b7 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 9 69 15.737 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CHH28_RS06860 b18860c9fa3e0a588ec6d6e45479c0b7 80 PIRSF PIRSF006488 1 80 5.2E-23 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CHH28_RS19460 eca9167bf5aacc8ca993220f335f5c1e 206 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 192 3.2E-43 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CHH28_RS19460 eca9167bf5aacc8ca993220f335f5c1e 206 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 10 199 1.1E-68 T 29-03-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 CHH28_RS19460 eca9167bf5aacc8ca993220f335f5c1e 206 Gene3D G3DSA:3.40.225.10 1 206 2.0E-45 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CHH28_RS19460 eca9167bf5aacc8ca993220f335f5c1e 206 SUPERFAMILY SSF53639 4 198 4.32E-43 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CHH28_RS19460 eca9167bf5aacc8ca993220f335f5c1e 206 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 203 101.429 T 29-03-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 CHH28_RS19460 eca9167bf5aacc8ca993220f335f5c1e 206 SMART SM01007 8 195 3.5E-49 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CHH28_RS07820 f1076a75fefbcaedc786e2131534c660 299 Pfam PF12118 SprA-related family 88 259 6.1E-43 T 29-03-2018 IPR021973 SprA-related family CHH28_RS12990 ad02f6b0c361d7109733dcd244915748 714 Pfam PF08453 Peptidase family M9 N-terminal 69 247 1.0E-42 T 29-03-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain CHH28_RS12990 ad02f6b0c361d7109733dcd244915748 714 Pfam PF01752 Collagenase 309 592 1.2E-94 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CHH28_RS12990 ad02f6b0c361d7109733dcd244915748 714 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 631 688 8.0E-7 T 29-03-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial CHH28_RS12990 ad02f6b0c361d7109733dcd244915748 714 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 135 153 7.7E-30 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CHH28_RS12990 ad02f6b0c361d7109733dcd244915748 714 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 492 507 7.7E-30 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CHH28_RS12990 ad02f6b0c361d7109733dcd244915748 714 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 469 487 7.7E-30 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CHH28_RS12990 ad02f6b0c361d7109733dcd244915748 714 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 427 443 7.7E-30 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CHH28_RS12990 ad02f6b0c361d7109733dcd244915748 714 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 409 423 7.7E-30 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CHH28_RS02620 452b497cc52cda2df0bc50eaae2a6501 165 Gene3D G3DSA:3.10.180.10 2 158 4.7E-28 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS02620 452b497cc52cda2df0bc50eaae2a6501 165 SUPERFAMILY SSF54593 6 155 9.8E-30 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS02620 452b497cc52cda2df0bc50eaae2a6501 165 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 151 7.5E-12 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CHH28_RS02620 452b497cc52cda2df0bc50eaae2a6501 165 TIGRFAM TIGR03645 glyox_marine: lactoylglutathione lyase family protein 4 165 1.2E-102 T 29-03-2018 IPR019883 Lactoylglutathione lyase CHH28_RS05325 72cf2b3e545cf7df89483b737cda9846 406 PIRSF PIRSF020818 1 406 1.6E-175 T 29-03-2018 IPR010915 Polyhydroxyalkanoate depolymerase CHH28_RS05325 72cf2b3e545cf7df89483b737cda9846 406 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 403 2.1E-165 T 29-03-2018 IPR010915 Polyhydroxyalkanoate depolymerase CHH28_RS05325 72cf2b3e545cf7df89483b737cda9846 406 Pfam PF06850 PHB de-polymerase C-terminus 203 404 3.9E-87 T 29-03-2018 IPR009656 PHB de-polymerase, C-terminal CHH28_RS05325 72cf2b3e545cf7df89483b737cda9846 406 Gene3D G3DSA:3.40.50.1820 79 405 2.4E-16 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS05325 72cf2b3e545cf7df89483b737cda9846 406 SUPERFAMILY SSF53474 97 402 5.61E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS11745 bb9e53d1a94217e6df33063ca98e3c61 220 SUPERFAMILY SSF53335 58 175 1.41E-23 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS11745 bb9e53d1a94217e6df33063ca98e3c61 220 Gene3D G3DSA:3.40.50.150 40 182 1.3E-27 T 29-03-2018 CHH28_RS11745 bb9e53d1a94217e6df33063ca98e3c61 220 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 81 152 4.4E-15 T 29-03-2018 CHH28_RS04345 c5c5ded4f538e9f58af213a862072712 632 Gene3D G3DSA:3.50.50.60 5 268 2.3E-72 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS04345 c5c5ded4f538e9f58af213a862072712 632 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 624 9.7E-282 T 29-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CHH28_RS04345 c5c5ded4f538e9f58af213a862072712 632 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 626 42.528 T 29-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CHH28_RS04345 c5c5ded4f538e9f58af213a862072712 632 SMART SM01228 548 619 5.0E-44 T 29-03-2018 CHH28_RS04345 c5c5ded4f538e9f58af213a862072712 632 SUPERFAMILY SSF51905 97 265 2.9E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS04345 c5c5ded4f538e9f58af213a862072712 632 SUPERFAMILY SSF51905 7 66 2.9E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS04345 c5c5ded4f538e9f58af213a862072712 632 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 372 395 - T 29-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CHH28_RS04345 c5c5ded4f538e9f58af213a862072712 632 Pfam PF01134 Glucose inhibited division protein A 8 403 9.9E-166 T 29-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CHH28_RS04345 c5c5ded4f538e9f58af213a862072712 632 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 277 291 - T 29-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CHH28_RS04345 c5c5ded4f538e9f58af213a862072712 632 Pfam PF13932 GidA associated domain 405 617 2.1E-78 T 29-03-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 CHH28_RS12015 2864107539ea54118bdeb6ff8bc70cbf 267 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 266 35.542 T 29-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 CHH28_RS12015 2864107539ea54118bdeb6ff8bc70cbf 267 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 260 2.7E-76 T 29-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 CHH28_RS12015 2864107539ea54118bdeb6ff8bc70cbf 267 Pfam PF04205 FMN-binding domain 155 250 1.8E-15 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CHH28_RS12015 2864107539ea54118bdeb6ff8bc70cbf 267 SMART SM00900 155 253 1.1E-32 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CHH28_RS12015 2864107539ea54118bdeb6ff8bc70cbf 267 PIRSF PIRSF009437 1 267 2.4E-86 T 29-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 CHH28_RS18030 3e15214029921e262927fd6c791320c8 405 Gene3D G3DSA:3.40.50.620 5 160 2.6E-31 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS18030 3e15214029921e262927fd6c791320c8 405 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 399 2.7E-142 T 29-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS18030 3e15214029921e262927fd6c791320c8 405 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 29-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS18030 3e15214029921e262927fd6c791320c8 405 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 118 129 - T 29-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS18030 3e15214029921e262927fd6c791320c8 405 Gene3D G3DSA:1.20.5.470 368 400 2.0E-11 T 29-03-2018 CHH28_RS18030 3e15214029921e262927fd6c791320c8 405 SUPERFAMILY SSF52402 5 208 2.87E-51 T 29-03-2018 CHH28_RS18030 3e15214029921e262927fd6c791320c8 405 Gene3D G3DSA:3.90.1260.10 161 357 1.0E-96 T 29-03-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS18030 3e15214029921e262927fd6c791320c8 405 Pfam PF00764 Arginosuccinate synthase 8 396 6.8E-156 T 29-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS18030 3e15214029921e262927fd6c791320c8 405 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 402 52.609 T 29-03-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS18030 3e15214029921e262927fd6c791320c8 405 SUPERFAMILY SSF69864 177 400 2.09E-92 T 29-03-2018 CHH28_RS02340 dbdaf6f8152a332b3ce2eac0d6ad555b 140 Pfam PF01584 CheW-like domain 8 134 1.9E-28 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS02340 dbdaf6f8152a332b3ce2eac0d6ad555b 140 SUPERFAMILY SSF50341 4 136 7.19E-29 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS02340 dbdaf6f8152a332b3ce2eac0d6ad555b 140 Gene3D G3DSA:2.40.50.180 24 87 3.6E-17 T 29-03-2018 CHH28_RS02340 dbdaf6f8152a332b3ce2eac0d6ad555b 140 Gene3D G3DSA:2.30.30.40 88 129 4.4E-11 T 29-03-2018 CHH28_RS02340 dbdaf6f8152a332b3ce2eac0d6ad555b 140 SMART SM00260 3 135 2.6E-24 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS03540 9524461835fd57a1703ead20eea33571 631 SMART SM00382 334 501 5.0E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS03540 9524461835fd57a1703ead20eea33571 631 SMART SM00382 26 220 5.9E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS03540 9524461835fd57a1703ead20eea33571 631 Pfam PF12848 ABC transporter 214 296 1.5E-26 T 29-03-2018 IPR032781 ABC-transporter extension domain CHH28_RS03540 9524461835fd57a1703ead20eea33571 631 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS03540 9524461835fd57a1703ead20eea33571 631 Pfam PF16326 ABC transporter C-terminal domain 544 626 1.9E-8 T 29-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CHH28_RS03540 9524461835fd57a1703ead20eea33571 631 Gene3D G3DSA:3.40.50.300 1 279 6.9E-50 T 29-03-2018 CHH28_RS03540 9524461835fd57a1703ead20eea33571 631 SUPERFAMILY SSF52540 2 247 9.55E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS03540 9524461835fd57a1703ead20eea33571 631 SUPERFAMILY SSF52540 292 514 5.48E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS03540 9524461835fd57a1703ead20eea33571 631 Pfam PF00005 ABC transporter 328 456 6.7E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS03540 9524461835fd57a1703ead20eea33571 631 Pfam PF00005 ABC transporter 17 175 3.5E-20 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS03540 9524461835fd57a1703ead20eea33571 631 Gene3D G3DSA:3.40.50.300 306 607 1.5E-45 T 29-03-2018 CHH28_RS03065 a9185b80a370dc1ac2b9e61dcef045bb 204 Gene3D G3DSA:3.40.50.300 80 185 9.8E-34 T 29-03-2018 CHH28_RS03065 a9185b80a370dc1ac2b9e61dcef045bb 204 Gene3D G3DSA:3.30.63.10 49 79 7.0E-25 T 29-03-2018 CHH28_RS03065 a9185b80a370dc1ac2b9e61dcef045bb 204 Pfam PF00625 Guanylate kinase 4 180 1.7E-55 T 29-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CHH28_RS03065 a9185b80a370dc1ac2b9e61dcef045bb 204 SMART SM00072 2 184 1.5E-68 T 29-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CHH28_RS03065 a9185b80a370dc1ac2b9e61dcef045bb 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 29-03-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CHH28_RS03065 a9185b80a370dc1ac2b9e61dcef045bb 204 Gene3D G3DSA:3.40.50.300 2 48 3.0E-4 T 29-03-2018 CHH28_RS03065 a9185b80a370dc1ac2b9e61dcef045bb 204 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 36.805 T 29-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CHH28_RS03065 a9185b80a370dc1ac2b9e61dcef045bb 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 4.2E-76 T 29-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CHH28_RS03065 a9185b80a370dc1ac2b9e61dcef045bb 204 SUPERFAMILY SSF52540 3 185 1.74E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09050 df0d71fe166ab69af42669d3dbf1b639 303 SUPERFAMILY SSF103481 31 132 1.57E-8 T 29-03-2018 CHH28_RS09050 df0d71fe166ab69af42669d3dbf1b639 303 Pfam PF00892 EamA-like transporter family 141 272 8.0E-15 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS09050 df0d71fe166ab69af42669d3dbf1b639 303 Pfam PF00892 EamA-like transporter family 3 129 1.6E-10 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS09050 df0d71fe166ab69af42669d3dbf1b639 303 SUPERFAMILY SSF103481 179 274 6.67E-15 T 29-03-2018 CHH28_RS01355 d53f0dd9f3786a380502b6b9b5e3558a 268 Pfam PF00149 Calcineurin-like phosphoesterase 4 79 1.3E-10 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CHH28_RS01355 d53f0dd9f3786a380502b6b9b5e3558a 268 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 268 44.175 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CHH28_RS01355 d53f0dd9f3786a380502b6b9b5e3558a 268 Gene3D G3DSA:3.60.21.10 1 268 3.6E-45 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS01355 d53f0dd9f3786a380502b6b9b5e3558a 268 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 263 4.6E-91 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CHH28_RS01355 d53f0dd9f3786a380502b6b9b5e3558a 268 PIRSF PIRSF000903 1 268 2.1E-109 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CHH28_RS01355 d53f0dd9f3786a380502b6b9b5e3558a 268 SUPERFAMILY SSF56300 1 254 2.73E-55 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS18535 6a2808b189d0df4a45ed773b569e093d 194 Pfam PF01553 Acyltransferase 41 147 4.7E-12 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CHH28_RS18535 6a2808b189d0df4a45ed773b569e093d 194 SUPERFAMILY SSF69593 24 146 4.05E-19 T 29-03-2018 CHH28_RS18535 6a2808b189d0df4a45ed773b569e093d 194 SMART SM00563 42 151 7.5E-18 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CHH28_RS18535 6a2808b189d0df4a45ed773b569e093d 194 Gene3D G3DSA:3.40.1130.10 1 188 1.5E-19 T 29-03-2018 CHH28_RS10740 841511108e8e2975292a452296dd5bcd 282 Gene3D G3DSA:3.40.50.620 1 157 3.3E-19 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS10740 841511108e8e2975292a452296dd5bcd 282 Gene3D G3DSA:3.40.50.620 159 282 1.1E-23 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS10740 841511108e8e2975292a452296dd5bcd 282 SUPERFAMILY SSF52402 162 282 4.35E-25 T 29-03-2018 CHH28_RS10740 841511108e8e2975292a452296dd5bcd 282 Pfam PF00582 Universal stress protein family 205 282 6.5E-12 T 29-03-2018 IPR006016 UspA GO:0006950 CHH28_RS10740 841511108e8e2975292a452296dd5bcd 282 Pfam PF00582 Universal stress protein family 2 154 3.8E-14 T 29-03-2018 IPR006016 UspA GO:0006950 CHH28_RS10740 841511108e8e2975292a452296dd5bcd 282 PRINTS PR01438 Universal stress protein signature 260 282 5.5E-11 T 29-03-2018 IPR006015 Universal stress protein A CHH28_RS10740 841511108e8e2975292a452296dd5bcd 282 PRINTS PR01438 Universal stress protein signature 162 180 5.5E-11 T 29-03-2018 IPR006015 Universal stress protein A CHH28_RS10740 841511108e8e2975292a452296dd5bcd 282 PRINTS PR01438 Universal stress protein signature 242 254 5.5E-11 T 29-03-2018 IPR006015 Universal stress protein A CHH28_RS10740 841511108e8e2975292a452296dd5bcd 282 SUPERFAMILY SSF52402 1 154 9.21E-21 T 29-03-2018 CHH28_RS13510 1d4b309bf93abab44b1b0f1ace028c0f 132 Gene3D G3DSA:3.90.350.10 1 118 3.8E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS13510 1d4b309bf93abab44b1b0f1ace028c0f 132 Pfam PF13586 Transposase DDE domain 44 130 4.2E-12 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS08325 1d4b309bf93abab44b1b0f1ace028c0f 132 Gene3D G3DSA:3.90.350.10 1 118 3.8E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS08325 1d4b309bf93abab44b1b0f1ace028c0f 132 Pfam PF13586 Transposase DDE domain 44 130 4.2E-12 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS07900 1d4b309bf93abab44b1b0f1ace028c0f 132 Gene3D G3DSA:3.90.350.10 1 118 3.8E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS07900 1d4b309bf93abab44b1b0f1ace028c0f 132 Pfam PF13586 Transposase DDE domain 44 130 4.2E-12 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS11525 592003d68b7aed0b9403e5d9d33bdf55 396 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 394 4.4E-123 T 29-03-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CHH28_RS11525 592003d68b7aed0b9403e5d9d33bdf55 396 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.7E-9 T 29-03-2018 CHH28_RS11525 592003d68b7aed0b9403e5d9d33bdf55 396 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 4.7E-9 T 29-03-2018 CHH28_RS11525 592003d68b7aed0b9403e5d9d33bdf55 396 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 364 371 4.7E-9 T 29-03-2018 CHH28_RS11525 592003d68b7aed0b9403e5d9d33bdf55 396 Gene3D G3DSA:1.10.8.260 271 324 5.8E-11 T 29-03-2018 IPR023166 HI0933 insert-like domain CHH28_RS11525 592003d68b7aed0b9403e5d9d33bdf55 396 Gene3D G3DSA:2.40.30.10 189 270 2.4E-22 T 29-03-2018 CHH28_RS11525 592003d68b7aed0b9403e5d9d33bdf55 396 SUPERFAMILY SSF51905 339 396 3.7E-58 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS11525 592003d68b7aed0b9403e5d9d33bdf55 396 SUPERFAMILY SSF51905 1 189 3.7E-58 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS11525 592003d68b7aed0b9403e5d9d33bdf55 396 Gene3D G3DSA:3.50.50.60 5 188 3.2E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS11525 592003d68b7aed0b9403e5d9d33bdf55 396 Pfam PF03486 HI0933-like protein 6 394 1.0E-143 T 29-03-2018 CHH28_RS11525 592003d68b7aed0b9403e5d9d33bdf55 396 SUPERFAMILY SSF160996 191 340 1.31E-38 T 29-03-2018 CHH28_RS10600 70a1191c138a2490204adaa899d34ca2 338 Gene3D G3DSA:1.10.10.60 88 284 0.011 T 29-03-2018 CHH28_RS10600 70a1191c138a2490204adaa899d34ca2 338 Pfam PF12833 Helix-turn-helix domain 254 333 3.0E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS10600 70a1191c138a2490204adaa899d34ca2 338 SUPERFAMILY SSF46689 285 333 4.48E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS10600 70a1191c138a2490204adaa899d34ca2 338 SMART SM00342 248 331 3.0E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS10600 70a1191c138a2490204adaa899d34ca2 338 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 204 3.8E-30 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS10600 70a1191c138a2490204adaa899d34ca2 338 Gene3D G3DSA:1.10.10.60 285 338 2.8E-10 T 29-03-2018 CHH28_RS15985 db08fb9ae08443d41380e60e44a571a0 337 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 25 321 2.7E-52 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CHH28_RS15985 db08fb9ae08443d41380e60e44a571a0 337 Gene3D G3DSA:2.40.50.100 149 295 3.1E-9 T 29-03-2018 CHH28_RS15985 db08fb9ae08443d41380e60e44a571a0 337 Gene3D G3DSA:1.10.287.470 105 148 2.6E-9 T 29-03-2018 CHH28_RS15985 db08fb9ae08443d41380e60e44a571a0 337 Pfam PF13533 Biotin-lipoyl like 50 96 6.6E-9 T 29-03-2018 CHH28_RS15985 db08fb9ae08443d41380e60e44a571a0 337 Pfam PF13437 HlyD family secretion protein 159 214 5.6E-5 T 29-03-2018 CHH28_RS15985 db08fb9ae08443d41380e60e44a571a0 337 Gene3D G3DSA:2.40.50.100 47 104 5.3E-13 T 29-03-2018 CHH28_RS15985 db08fb9ae08443d41380e60e44a571a0 337 SUPERFAMILY SSF111369 40 261 5.1E-24 T 29-03-2018 CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 Gene3D G3DSA:3.40.50.2300 6 145 1.1E-14 T 29-03-2018 CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 SUPERFAMILY SSF47384 152 231 4.71E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 SMART SM00388 165 230 1.1E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 Pfam PF00512 His Kinase A (phospho-acceptor) domain 165 230 2.7E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 SMART SM00387 277 391 9.8E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 SUPERFAMILY SSF52172 12 146 3.42E-14 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 SUPERFAMILY SSF55874 219 393 2.23E-44 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 344 4.4E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 330 4.4E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 388 4.4E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 369 4.4E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 Pfam PF00072 Response regulator receiver domain 412 520 1.2E-18 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 Pfam PF00072 Response regulator receiver domain 16 126 1.9E-8 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 278 390 1.0E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 SUPERFAMILY SSF52172 406 522 1.07E-27 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 Gene3D G3DSA:3.40.50.2300 395 526 1.6E-28 T 29-03-2018 CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 Gene3D G3DSA:1.10.287.130 154 224 3.7E-15 T 29-03-2018 CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 Gene3D G3DSA:3.30.565.10 225 391 3.6E-46 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 SMART SM00448 409 520 1.6E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13840 6115f76b98e9a43483b0ab20a1b5fa57 527 SMART SM00448 14 136 0.0011 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS02980 0f302ce2c9a75492f6a25f04645e3bb8 272 SUPERFAMILY SSF46946 133 224 1.83E-30 T 29-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CHH28_RS02980 0f302ce2c9a75492f6a25f04645e3bb8 272 Pfam PF06827 Zinc finger found in FPG and IleRS 244 271 9.8E-8 T 29-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CHH28_RS02980 0f302ce2c9a75492f6a25f04645e3bb8 272 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 272 43.028 T 29-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CHH28_RS02980 0f302ce2c9a75492f6a25f04645e3bb8 272 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 113 1.2E-29 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CHH28_RS02980 0f302ce2c9a75492f6a25f04645e3bb8 272 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 132 221 7.7E-26 T 29-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CHH28_RS02980 0f302ce2c9a75492f6a25f04645e3bb8 272 SMART SM00898 2 115 3.1E-50 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CHH28_RS02980 0f302ce2c9a75492f6a25f04645e3bb8 272 Gene3D G3DSA:3.20.190.10 2 130 4.7E-36 T 29-03-2018 CHH28_RS02980 0f302ce2c9a75492f6a25f04645e3bb8 272 Gene3D G3DSA:1.10.8.50 133 272 5.1E-49 T 29-03-2018 CHH28_RS02980 0f302ce2c9a75492f6a25f04645e3bb8 272 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 271 3.5E-92 T 29-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CHH28_RS02980 0f302ce2c9a75492f6a25f04645e3bb8 272 SUPERFAMILY SSF81624 2 141 3.53E-40 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CHH28_RS02980 0f302ce2c9a75492f6a25f04645e3bb8 272 SMART SM01232 132 224 2.5E-50 T 29-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CHH28_RS02980 0f302ce2c9a75492f6a25f04645e3bb8 272 SUPERFAMILY SSF57716 220 271 7.31E-16 T 29-03-2018 CHH28_RS05260 e0e238e9df4c7b53fbfe99a79c96801f 699 SUPERFAMILY SSF56024 515 694 7.18E-70 T 29-03-2018 CHH28_RS05260 e0e238e9df4c7b53fbfe99a79c96801f 699 Gene3D G3DSA:1.20.58.310 22 124 4.9E-34 T 29-03-2018 CHH28_RS05260 e0e238e9df4c7b53fbfe99a79c96801f 699 Hamap MF_00347 Polyphosphate kinase [ppk]. 18 697 28.838 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CHH28_RS05260 e0e238e9df4c7b53fbfe99a79c96801f 699 Pfam PF02503 Polyphosphate kinase middle domain 135 336 4.0E-64 T 29-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CHH28_RS05260 e0e238e9df4c7b53fbfe99a79c96801f 699 Gene3D G3DSA:3.30.1840.10 125 320 1.1E-64 T 29-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CHH28_RS05260 e0e238e9df4c7b53fbfe99a79c96801f 699 SUPERFAMILY SSF56024 330 510 1.84E-56 T 29-03-2018 CHH28_RS05260 e0e238e9df4c7b53fbfe99a79c96801f 699 SUPERFAMILY SSF140356 17 120 1.44E-37 T 29-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CHH28_RS05260 e0e238e9df4c7b53fbfe99a79c96801f 699 SUPERFAMILY SSF143724 123 328 7.46E-66 T 29-03-2018 CHH28_RS05260 e0e238e9df4c7b53fbfe99a79c96801f 699 Pfam PF13090 Polyphosphate kinase C-terminal domain 345 692 3.7E-151 T 29-03-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 CHH28_RS05260 e0e238e9df4c7b53fbfe99a79c96801f 699 Pfam PF13089 Polyphosphate kinase N-terminal domain 20 125 6.2E-35 T 29-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CHH28_RS05260 e0e238e9df4c7b53fbfe99a79c96801f 699 Gene3D G3DSA:3.30.870.10 335 514 2.4E-21 T 29-03-2018 CHH28_RS05260 e0e238e9df4c7b53fbfe99a79c96801f 699 PIRSF PIRSF015589 1 699 1.3E-279 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CHH28_RS05260 e0e238e9df4c7b53fbfe99a79c96801f 699 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 20 693 8.8E-283 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CHH28_RS05260 e0e238e9df4c7b53fbfe99a79c96801f 699 Gene3D G3DSA:3.30.870.10 515 699 9.8E-36 T 29-03-2018 CHH28_RS07045 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS07045 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS16360 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS16360 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS18195 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS18195 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS06680 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS06680 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS18235 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS18235 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS01010 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS01010 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS10725 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS10725 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS07550 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS07550 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS02250 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS02250 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS02625 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS02625 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS04195 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS04195 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS04125 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS04125 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS16475 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS16475 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS04645 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS04645 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS04070 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS04070 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS18215 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS18215 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS13435 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS13435 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS02710 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS02710 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS06310 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS06310 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS10330 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS10330 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS09940 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS09940 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS17355 535eb49097a279e206bbd1fea75fd59d 132 Gene3D G3DSA:3.90.350.10 1 118 6.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS17355 535eb49097a279e206bbd1fea75fd59d 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS12985 9ab34a3b4a1f556b75f3a76efdc9e008 446 Gene3D G3DSA:3.30.450.40 257 433 9.4E-4 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS12985 9ab34a3b4a1f556b75f3a76efdc9e008 446 SUPERFAMILY SSF158472 223 268 1.31E-5 T 29-03-2018 CHH28_RS12985 9ab34a3b4a1f556b75f3a76efdc9e008 446 SMART SM00304 222 274 4.7E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS05235 22a83993b1f144b551a591ccbc0d0b7b 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 244.459 T 29-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CHH28_RS05235 22a83993b1f144b551a591ccbc0d0b7b 419 SMART SM00382 170 355 3.4E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS05235 22a83993b1f144b551a591ccbc0d0b7b 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.7E-24 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CHH28_RS05235 22a83993b1f144b551a591ccbc0d0b7b 419 SMART SM00357 52 118 4.4E-17 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CHH28_RS05235 22a83993b1f144b551a591ccbc0d0b7b 419 Gene3D G3DSA:3.40.50.300 129 419 1.0E-56 T 29-03-2018 CHH28_RS05235 22a83993b1f144b551a591ccbc0d0b7b 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 3.2E-214 T 29-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CHH28_RS05235 22a83993b1f144b551a591ccbc0d0b7b 419 Gene3D G3DSA:2.40.50.140 2 126 9.9E-47 T 29-03-2018 CHH28_RS05235 22a83993b1f144b551a591ccbc0d0b7b 419 SUPERFAMILY SSF50249 48 125 4.24E-28 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS05235 22a83993b1f144b551a591ccbc0d0b7b 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.1E-17 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CHH28_RS05235 22a83993b1f144b551a591ccbc0d0b7b 419 SUPERFAMILY SSF68912 1 46 2.43E-12 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CHH28_RS05235 22a83993b1f144b551a591ccbc0d0b7b 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 1.1E-31 T 29-03-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 CHH28_RS05235 22a83993b1f144b551a591ccbc0d0b7b 419 SMART SM00959 5 47 2.3E-19 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CHH28_RS05235 22a83993b1f144b551a591ccbc0d0b7b 419 SUPERFAMILY SSF52540 90 370 2.58E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS12680 4c26e209992ffac3518acc73d781c1eb 451 Gene3D G3DSA:3.30.310.50 363 451 2.4E-16 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS12680 4c26e209992ffac3518acc73d781c1eb 451 SUPERFAMILY SSF53738 152 254 1.65E-25 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS12680 4c26e209992ffac3518acc73d781c1eb 451 SUPERFAMILY SSF53738 7 176 2.71E-39 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS12680 4c26e209992ffac3518acc73d781c1eb 451 Gene3D G3DSA:3.40.120.10 5 159 1.1E-41 T 29-03-2018 CHH28_RS12680 4c26e209992ffac3518acc73d781c1eb 451 SUPERFAMILY SSF55957 367 448 4.53E-20 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS12680 4c26e209992ffac3518acc73d781c1eb 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 203 216 4.3E-26 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS12680 4c26e209992ffac3518acc73d781c1eb 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 247 4.3E-26 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS12680 4c26e209992ffac3518acc73d781c1eb 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 169 188 4.3E-26 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS12680 4c26e209992ffac3518acc73d781c1eb 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 92 106 4.3E-26 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS12680 4c26e209992ffac3518acc73d781c1eb 451 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 367 7.5E-25 T 29-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS12680 4c26e209992ffac3518acc73d781c1eb 451 SUPERFAMILY SSF53738 257 362 2.55E-31 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS12680 4c26e209992ffac3518acc73d781c1eb 451 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 93 102 - T 29-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS12680 4c26e209992ffac3518acc73d781c1eb 451 Gene3D G3DSA:3.40.120.10 160 261 9.7E-28 T 29-03-2018 CHH28_RS12680 4c26e209992ffac3518acc73d781c1eb 451 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 372 441 7.6E-13 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS12680 4c26e209992ffac3518acc73d781c1eb 451 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 135 5.3E-36 T 29-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS12680 4c26e209992ffac3518acc73d781c1eb 451 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 153 252 3.8E-22 T 29-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS12680 4c26e209992ffac3518acc73d781c1eb 451 Gene3D G3DSA:3.40.120.10 262 362 7.0E-27 T 29-03-2018 CHH28_RS12480 e76da86c31929fe55cce5d1cfca94226 82 Pfam PF00462 Glutaredoxin 10 55 1.1E-9 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CHH28_RS12480 e76da86c31929fe55cce5d1cfca94226 82 Gene3D G3DSA:3.40.30.10 1 82 3.1E-12 T 29-03-2018 CHH28_RS12480 e76da86c31929fe55cce5d1cfca94226 82 SUPERFAMILY SSF52833 1 80 2.79E-16 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS16150 bacfe585c7bc2b3bb2992fdf8edc5055 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 62 370 2.4E-35 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CHH28_RS16150 bacfe585c7bc2b3bb2992fdf8edc5055 391 SUPERFAMILY SSF111369 62 243 2.09E-16 T 29-03-2018 CHH28_RS16150 bacfe585c7bc2b3bb2992fdf8edc5055 391 Pfam PF13437 HlyD family secretion protein 186 282 1.6E-14 T 29-03-2018 CHH28_RS16150 bacfe585c7bc2b3bb2992fdf8edc5055 391 Gene3D G3DSA:1.20.1600.10 35 284 9.2E-16 T 29-03-2018 CHH28_RS16780 09fa18ac71d650e89eff2bdce04ca1e2 127 Gene3D G3DSA:2.40.50.100 6 127 2.6E-46 T 29-03-2018 CHH28_RS16780 09fa18ac71d650e89eff2bdce04ca1e2 127 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CHH28_RS16780 09fa18ac71d650e89eff2bdce04ca1e2 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 124 6.3E-50 T 29-03-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CHH28_RS16780 09fa18ac71d650e89eff2bdce04ca1e2 127 SUPERFAMILY SSF51230 3 126 3.66E-44 T 29-03-2018 IPR011053 Single hybrid motif CHH28_RS16780 09fa18ac71d650e89eff2bdce04ca1e2 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 41.752 T 29-03-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CHH28_RS16780 09fa18ac71d650e89eff2bdce04ca1e2 127 Pfam PF01597 Glycine cleavage H-protein 8 126 3.5E-47 T 29-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate CHH28_RS10570 84230b3e93b40dbfbcf35829d6aadd7b 381 SUPERFAMILY SSF51905 289 377 7.5E-32 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS10570 84230b3e93b40dbfbcf35829d6aadd7b 381 SUPERFAMILY SSF51905 6 176 7.5E-32 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS10570 84230b3e93b40dbfbcf35829d6aadd7b 381 Pfam PF04820 Tryptophan halogenase 102 377 8.3E-9 T 29-03-2018 IPR006905 Flavin-dependent halogenase CHH28_RS10570 84230b3e93b40dbfbcf35829d6aadd7b 381 Gene3D G3DSA:3.50.50.60 5 363 6.5E-27 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS18785 a147df3d5b92ee0012dc6074205d6c50 266 Pfam PF01739 CheR methyltransferase, SAM binding domain 70 261 3.0E-63 T 29-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CHH28_RS18785 a147df3d5b92ee0012dc6074205d6c50 266 Gene3D G3DSA:1.10.155.10 1 68 1.9E-20 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CHH28_RS18785 a147df3d5b92ee0012dc6074205d6c50 266 PRINTS PR00996 Glutamate methyltransferase family signature 63 75 7.0E-44 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS18785 a147df3d5b92ee0012dc6074205d6c50 266 PRINTS PR00996 Glutamate methyltransferase family signature 25 38 7.0E-44 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS18785 a147df3d5b92ee0012dc6074205d6c50 266 PRINTS PR00996 Glutamate methyltransferase family signature 205 219 7.0E-44 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS18785 a147df3d5b92ee0012dc6074205d6c50 266 PRINTS PR00996 Glutamate methyltransferase family signature 103 123 7.0E-44 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS18785 a147df3d5b92ee0012dc6074205d6c50 266 PRINTS PR00996 Glutamate methyltransferase family signature 224 247 7.0E-44 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS18785 a147df3d5b92ee0012dc6074205d6c50 266 PRINTS PR00996 Glutamate methyltransferase family signature 137 153 7.0E-44 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS18785 a147df3d5b92ee0012dc6074205d6c50 266 SUPERFAMILY SSF53335 70 264 6.01E-55 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS18785 a147df3d5b92ee0012dc6074205d6c50 266 Gene3D G3DSA:3.40.50.150 69 265 2.6E-51 T 29-03-2018 CHH28_RS18785 a147df3d5b92ee0012dc6074205d6c50 266 SMART SM00138 3 265 1.3E-101 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS18785 a147df3d5b92ee0012dc6074205d6c50 266 Pfam PF03705 CheR methyltransferase, all-alpha domain 4 51 4.0E-16 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CHH28_RS18785 a147df3d5b92ee0012dc6074205d6c50 266 SUPERFAMILY SSF47757 1 69 2.62E-19 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CHH28_RS18785 a147df3d5b92ee0012dc6074205d6c50 266 PIRSF PIRSF000410 1 266 4.8E-99 T 29-03-2018 IPR026024 Chemotaxis protein methyltransferase CheR CHH28_RS06345 b79cfd185f8b50d5380dd008baed8121 682 Gene3D G3DSA:2.170.130.10 20 144 4.6E-34 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS06345 b79cfd185f8b50d5380dd008baed8121 682 Gene3D G3DSA:2.40.170.20 145 682 7.5E-51 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS06345 b79cfd185f8b50d5380dd008baed8121 682 Pfam PF00593 TonB dependent receptor 211 680 5.1E-33 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS06345 b79cfd185f8b50d5380dd008baed8121 682 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 148 3.3E-23 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS06345 b79cfd185f8b50d5380dd008baed8121 682 SUPERFAMILY SSF56935 32 682 1.36E-96 T 29-03-2018 CHH28_RS12485 acf742765ce4638fad8c6a84a8817085 803 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 517 627 9.0E-11 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS12485 acf742765ce4638fad8c6a84a8817085 803 Gene3D G3DSA:1.10.287.130 392 461 3.0E-12 T 29-03-2018 CHH28_RS12485 acf742765ce4638fad8c6a84a8817085 803 Pfam PF00072 Response regulator receiver domain 658 773 4.5E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS12485 acf742765ce4638fad8c6a84a8817085 803 SUPERFAMILY SSF52172 656 777 4.98E-38 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS12485 acf742765ce4638fad8c6a84a8817085 803 SMART SM00448 656 773 4.4E-40 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS12485 acf742765ce4638fad8c6a84a8817085 803 Gene3D G3DSA:3.30.565.10 472 638 8.0E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS12485 acf742765ce4638fad8c6a84a8817085 803 SMART SM00387 513 629 2.0E-10 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS12485 acf742765ce4638fad8c6a84a8817085 803 SUPERFAMILY SSF55874 455 627 7.07E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS12485 acf742765ce4638fad8c6a84a8817085 803 Gene3D G3DSA:3.40.50.2300 644 790 3.2E-43 T 29-03-2018 CHH28_RS12485 acf742765ce4638fad8c6a84a8817085 803 SMART SM00388 402 466 1.3E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS12485 acf742765ce4638fad8c6a84a8817085 803 Pfam PF07696 7TMR-DISM extracellular 2 48 159 1.4E-9 T 29-03-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 CHH28_RS12485 acf742765ce4638fad8c6a84a8817085 803 SUPERFAMILY SSF47384 389 466 1.1E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS12485 acf742765ce4638fad8c6a84a8817085 803 Pfam PF00512 His Kinase A (phospho-acceptor) domain 402 466 3.2E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS08590 9bc312e1c4c55094f5162d8a5913b99b 1326 Pfam PF13502 AsmA-like C-terminal region 1047 1293 1.1E-37 T 29-03-2018 IPR032712 AsmA-like, C-terminal CHH28_RS08590 9bc312e1c4c55094f5162d8a5913b99b 1326 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 7 1296 9.1E-170 T 29-03-2018 IPR011836 Conserved hypothetical protein CHP02099 CHH28_RS08590 9bc312e1c4c55094f5162d8a5913b99b 1326 Pfam PF13116 Protein of unknown function 531 809 1.0E-44 T 29-03-2018 IPR025263 Domain of unknown function DUF3971 CHH28_RS01560 2d0b622b454a00652b5d58ac1e67efc2 150 Pfam PF13673 Acetyltransferase (GNAT) domain 17 148 1.5E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS01560 2d0b622b454a00652b5d58ac1e67efc2 150 SUPERFAMILY SSF55729 3 149 2.13E-31 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS01560 2d0b622b454a00652b5d58ac1e67efc2 150 Gene3D G3DSA:3.40.630.30 1 150 6.4E-25 T 29-03-2018 CHH28_RS16860 0416649ec69ffbe3b0e4259240742f74 216 Gene3D G3DSA:3.40.50.300 2 209 1.8E-39 T 29-03-2018 CHH28_RS16860 0416649ec69ffbe3b0e4259240742f74 216 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS16860 0416649ec69ffbe3b0e4259240742f74 216 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 9 206 3.0E-72 T 29-03-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 CHH28_RS16860 0416649ec69ffbe3b0e4259240742f74 216 SUPERFAMILY SSF52540 7 195 3.63E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS16860 0416649ec69ffbe3b0e4259240742f74 216 SMART SM00382 33 215 1.4E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS16860 0416649ec69ffbe3b0e4259240742f74 216 Pfam PF00005 ABC transporter 25 163 3.8E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS06125 7aa3cc9193e6f6316243f3a368cef243 118 Gene3D G3DSA:1.10.8.50 1 66 9.2E-25 T 29-03-2018 CHH28_RS06125 7aa3cc9193e6f6316243f3a368cef243 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.1E-54 T 29-03-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06125 7aa3cc9193e6f6316243f3a368cef243 118 SUPERFAMILY SSF46946 2 114 5.0E-46 T 29-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CHH28_RS06125 7aa3cc9193e6f6316243f3a368cef243 118 Gene3D G3DSA:4.10.910.10 85 118 2.3E-24 T 29-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06125 7aa3cc9193e6f6316243f3a368cef243 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 5.1E-32 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06125 7aa3cc9193e6f6316243f3a368cef243 118 Gene3D G3DSA:4.10.910.10 67 84 7.7E-19 T 29-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06125 7aa3cc9193e6f6316243f3a368cef243 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 29-03-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06125 7aa3cc9193e6f6316243f3a368cef243 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.873 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06125 7aa3cc9193e6f6316243f3a368cef243 118 PIRSF PIRSF002134 1 118 1.8E-41 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06875 c9907a7116fd7ffad8f2ec3dcba3ae8d 518 SMART SM00448 12 123 8.5E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS06875 c9907a7116fd7ffad8f2ec3dcba3ae8d 518 Gene3D G3DSA:3.40.50.2300 4 192 5.9E-35 T 29-03-2018 CHH28_RS06875 c9907a7116fd7ffad8f2ec3dcba3ae8d 518 Gene3D G3DSA:1.10.3210.10 193 375 1.5E-19 T 29-03-2018 CHH28_RS06875 c9907a7116fd7ffad8f2ec3dcba3ae8d 518 Pfam PF13487 HD domain 261 318 2.2E-9 T 29-03-2018 CHH28_RS06875 c9907a7116fd7ffad8f2ec3dcba3ae8d 518 Pfam PF00072 Response regulator receiver domain 14 123 6.8E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS06875 c9907a7116fd7ffad8f2ec3dcba3ae8d 518 SUPERFAMILY SSF52172 14 159 1.42E-36 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS06875 c9907a7116fd7ffad8f2ec3dcba3ae8d 518 SUPERFAMILY SSF109604 199 368 7.71E-16 T 29-03-2018 CHH28_RS17575 b724acafa08c8a358f3811b60585676b 520 SUPERFAMILY SSF56601 189 502 7.51E-58 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS17575 b724acafa08c8a358f3811b60585676b 520 Pfam PF00144 Beta-lactamase 215 498 2.4E-26 T 29-03-2018 IPR001466 Beta-lactamase-related CHH28_RS17575 b724acafa08c8a358f3811b60585676b 520 Gene3D G3DSA:3.40.710.10 222 519 1.0E-43 T 29-03-2018 CHH28_RS13000 744aa1b6c891c83a00b550de2dc04819 212 SMART SM00464 3 211 1.5E-6 T 29-03-2018 IPR003111 Lon, substrate-binding domain CHH28_RS13000 744aa1b6c891c83a00b550de2dc04819 212 Gene3D G3DSA:2.30.130.40 1 125 1.0E-18 T 29-03-2018 CHH28_RS13000 744aa1b6c891c83a00b550de2dc04819 212 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 211 1.8E-16 T 29-03-2018 IPR003111 Lon, substrate-binding domain CHH28_RS13000 744aa1b6c891c83a00b550de2dc04819 212 SUPERFAMILY SSF88697 3 210 2.16E-31 T 29-03-2018 IPR015947 PUA-like domain CHH28_RS06160 bd9db5b6fed47c29fafc84aab2f63166 159 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 151 7.0E-25 T 29-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CHH28_RS10125 4c4deb65177a182654e07a0ef09b8f63 731 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 159 551 1.1E-100 T 29-03-2018 IPR003776 YcaO-like domain CHH28_RS10125 4c4deb65177a182654e07a0ef09b8f63 731 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 205 540 1.2E-71 T 29-03-2018 IPR003776 YcaO-like domain CHH28_RS10125 4c4deb65177a182654e07a0ef09b8f63 731 TIGRFAM TIGR03549 TIGR03549: YcaO domain protein 3 728 0.0 T 29-03-2018 IPR019938 YcaO domain protein CHH28_RS10125 4c4deb65177a182654e07a0ef09b8f63 731 SUPERFAMILY SSF82784 1 129 9.68E-21 T 29-03-2018 IPR003718 OsmC/Ohr family CHH28_RS10125 4c4deb65177a182654e07a0ef09b8f63 731 Pfam PF02566 OsmC-like protein 32 126 8.2E-10 T 29-03-2018 IPR003718 OsmC/Ohr family CHH28_RS10125 4c4deb65177a182654e07a0ef09b8f63 731 Gene3D G3DSA:3.30.300.20 1 134 6.4E-17 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 Pfam PF00512 His Kinase A (phospho-acceptor) domain 145 209 2.3E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 SMART SM00388 144 209 1.3E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 SUPERFAMILY SSF55874 198 369 5.24E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 Gene3D G3DSA:3.40.50.2300 388 527 2.1E-38 T 29-03-2018 CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 SMART SM00448 393 507 6.9E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 325 2.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 311 2.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 369 2.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 332 350 2.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 SMART SM00387 256 372 1.2E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 56 136 5.7E-7 T 29-03-2018 IPR000014 PAS domain CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 256 369 6.1E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 SUPERFAMILY SSF55785 56 133 5.33E-7 T 29-03-2018 IPR000014 PAS domain CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 Pfam PF00072 Response regulator receiver domain 395 507 1.7E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 SUPERFAMILY SSF52172 393 512 6.83E-35 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 Pfam PF08448 PAS fold 19 131 1.2E-10 T 29-03-2018 IPR013656 PAS fold-4 CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 Gene3D G3DSA:3.30.565.10 213 378 9.4E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 Gene3D G3DSA:1.10.287.130 136 205 1.1E-18 T 29-03-2018 CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 SUPERFAMILY SSF47384 130 210 2.16E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS05330 4da624e1096aa1a748ec76f0e5224d03 529 Gene3D G3DSA:3.30.450.20 3 135 1.4E-12 T 29-03-2018 CHH28_RS07465 17ccbdb947d522f253579684a0bd47a4 160 SUPERFAMILY SSF55729 1 155 5.15E-20 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS07465 17ccbdb947d522f253579684a0bd47a4 160 Pfam PF00583 Acetyltransferase (GNAT) family 35 139 1.8E-8 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS07465 17ccbdb947d522f253579684a0bd47a4 160 Gene3D G3DSA:3.40.630.30 1 152 1.1E-20 T 29-03-2018 CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 SUPERFAMILY SSF47794 433 495 5.97E-17 T 29-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 SMART SM00316 136 203 3.6E-9 T 29-03-2018 IPR022967 RNA-binding domain, S1 CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 369 417 1.1E-19 T 29-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 444 493 5.1E-18 T 29-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 Gene3D G3DSA:1.10.150.20 431 498 1.8E-15 T 29-03-2018 CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 Gene3D G3DSA:1.10.150.20 357 425 5.0E-13 T 29-03-2018 CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 Pfam PF13184 NusA-like KH domain 233 300 3.0E-25 T 29-03-2018 IPR025249 KH domain, NusA-like GO:0003723 CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 Gene3D G3DSA:3.30.300.20 202 280 1.7E-30 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 SUPERFAMILY SSF50249 135 202 4.68E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 Pfam PF14520 Helix-hairpin-helix domain 436 491 2.8E-9 T 29-03-2018 CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 Gene3D G3DSA:3.30.300.20 282 352 1.8E-14 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 Gene3D G3DSA:2.40.50.140 131 201 1.1E-16 T 29-03-2018 CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 Gene3D G3DSA:3.30.1480.10 1 128 5.0E-42 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 SUPERFAMILY SSF54814 205 282 7.85E-27 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 414 29.272 T 29-03-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 SUPERFAMILY SSF69705 1 129 6.41E-37 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 SMART SM00322 233 297 11.0 T 29-03-2018 IPR004087 K Homology domain GO:0003676 CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 SMART SM00322 305 365 0.042 T 29-03-2018 IPR004087 K Homology domain GO:0003676 CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 SUPERFAMILY SSF47794 359 421 1.57E-16 T 29-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 Pfam PF00575 S1 RNA binding domain 135 198 2.4E-7 T 29-03-2018 IPR003029 S1 domain GO:0003676 CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 SUPERFAMILY SSF54814 283 346 1.9E-14 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 Pfam PF08529 NusA N-terminal domain 4 126 6.6E-37 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CHH28_RS00455 defb6830dc16f6d2401aabe0427bd7db 498 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 346 2.7E-119 T 29-03-2018 IPR010213 Transcription termination factor NusA GO:0003723 CHH28_RS14765 e85356e57fea9e24fc542055d95d7a99 242 Gene3D G3DSA:3.40.190.10 122 202 1.2E-9 T 29-03-2018 CHH28_RS14765 e85356e57fea9e24fc542055d95d7a99 242 SMART SM00062 25 242 0.0019 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS14765 e85356e57fea9e24fc542055d95d7a99 242 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 241 2.1E-20 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS14765 e85356e57fea9e24fc542055d95d7a99 242 SUPERFAMILY SSF53850 22 241 2.0E-35 T 29-03-2018 CHH28_RS14765 e85356e57fea9e24fc542055d95d7a99 242 Gene3D G3DSA:3.40.190.10 16 121 1.7E-7 T 29-03-2018 CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 Gene3D G3DSA:2.60.260.20 255 363 4.7E-30 T 29-03-2018 CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 Pfam PF00226 DnaJ domain 5 67 8.6E-27 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 Gene3D G3DSA:1.10.287.110 1 112 4.0E-35 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 Gene3D G3DSA:2.10.230.10 147 192 2.8E-14 T 29-03-2018 CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 370 42.749 T 29-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 Gene3D G3DSA:2.60.260.20 193 254 1.1E-18 T 29-03-2018 CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 Pfam PF01556 DnaJ C terminal domain 121 333 6.7E-45 T 29-03-2018 IPR002939 Chaperone DnaJ, C-terminal CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 SUPERFAMILY SSF57938 134 210 4.19E-22 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 SMART SM00271 4 62 5.1E-30 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 349 3.6E-139 T 29-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 SUPERFAMILY SSF49493 259 344 2.09E-23 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 PRINTS PR00625 DnaJ domain signature 7 25 9.3E-32 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 PRINTS PR00625 DnaJ domain signature 42 62 9.3E-32 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 PRINTS PR00625 DnaJ domain signature 25 40 9.3E-32 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 PRINTS PR00625 DnaJ domain signature 62 81 9.3E-32 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 29-03-2018 IPR018253 DnaJ domain, conserved site CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 SUPERFAMILY SSF46565 1 111 2.36E-36 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 SUPERFAMILY SSF49493 186 267 3.01E-21 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 SUPERFAMILY SSF49493 114 138 3.01E-21 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CHH28_RS00545 1d7a76af1447d20887ad8aa402d0b259 374 Pfam PF00684 DnaJ central domain 147 207 2.7E-14 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CHH28_RS06415 47691fa6519727e7fcbf99345cce28aa 311 Gene3D G3DSA:3.40.50.850 118 311 4.2E-46 T 29-03-2018 CHH28_RS06415 47691fa6519727e7fcbf99345cce28aa 311 Gene3D G3DSA:3.10.450.50 4 117 4.1E-13 T 29-03-2018 CHH28_RS06415 47691fa6519727e7fcbf99345cce28aa 311 SUPERFAMILY SSF52499 127 310 6.67E-51 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CHH28_RS06415 47691fa6519727e7fcbf99345cce28aa 311 Pfam PF00857 Isochorismatase family 134 282 3.1E-38 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CHH28_RS06415 47691fa6519727e7fcbf99345cce28aa 311 SUPERFAMILY SSF54427 6 119 6.81E-19 T 29-03-2018 IPR032710 NTF2-like domain CHH28_RS06415 47691fa6519727e7fcbf99345cce28aa 311 Pfam PF14534 Domain of unknown function (DUF4440) 10 93 2.5E-8 T 29-03-2018 IPR027843 Domain of unknown function DUF4440 CHH28_RS12905 fa142fcf0eed41da271117f906f8ed94 1045 SUPERFAMILY SSF82866 291 488 1.31E-33 T 29-03-2018 CHH28_RS12905 fa142fcf0eed41da271117f906f8ed94 1045 SUPERFAMILY SSF82866 801 1022 1.57E-39 T 29-03-2018 CHH28_RS12905 fa142fcf0eed41da271117f906f8ed94 1045 Gene3D G3DSA:3.30.2090.10 174 260 4.1E-10 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS12905 fa142fcf0eed41da271117f906f8ed94 1045 Gene3D G3DSA:1.20.1640.10 801 1021 8.4E-35 T 29-03-2018 CHH28_RS12905 fa142fcf0eed41da271117f906f8ed94 1045 Gene3D G3DSA:1.20.1640.10 261 489 9.2E-31 T 29-03-2018 CHH28_RS12905 fa142fcf0eed41da271117f906f8ed94 1045 SUPERFAMILY SSF82693 138 175 1.05E-10 T 29-03-2018 CHH28_RS12905 fa142fcf0eed41da271117f906f8ed94 1045 SUPERFAMILY SSF82693 262 316 1.05E-10 T 29-03-2018 CHH28_RS12905 fa142fcf0eed41da271117f906f8ed94 1045 PRINTS PR00702 Acriflavin resistance protein family signature 380 404 7.7E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS12905 fa142fcf0eed41da271117f906f8ed94 1045 PRINTS PR00702 Acriflavin resistance protein family signature 324 347 7.7E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS12905 fa142fcf0eed41da271117f906f8ed94 1045 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 7.7E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS12905 fa142fcf0eed41da271117f906f8ed94 1045 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 7.7E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS12905 fa142fcf0eed41da271117f906f8ed94 1045 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 7.7E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS12905 fa142fcf0eed41da271117f906f8ed94 1045 SUPERFAMILY SSF82714 721 795 8.5E-11 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS12905 fa142fcf0eed41da271117f906f8ed94 1045 Gene3D G3DSA:3.30.2090.10 711 797 2.5E-11 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS12905 fa142fcf0eed41da271117f906f8ed94 1045 SUPERFAMILY SSF82714 178 259 1.96E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS12905 fa142fcf0eed41da271117f906f8ed94 1045 Gene3D G3DSA:3.30.70.1430 40 138 3.2E-9 T 29-03-2018 CHH28_RS12905 fa142fcf0eed41da271117f906f8ed94 1045 Pfam PF00873 AcrB/AcrD/AcrF family 1 1018 3.0E-142 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS12905 fa142fcf0eed41da271117f906f8ed94 1045 SUPERFAMILY SSF82693 42 127 8.11E-9 T 29-03-2018 CHH28_RS13880 69717c0ac243dd937b088e071fe71c6c 384 SUPERFAMILY SSF53098 8 216 1.04E-61 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS13880 69717c0ac243dd937b088e071fe71c6c 384 Hamap MF_01899 Ribonuclease D [rnd]. 9 375 37.733 T 29-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CHH28_RS13880 69717c0ac243dd937b088e071fe71c6c 384 Pfam PF00570 HRDC domain 222 285 1.2E-13 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CHH28_RS13880 69717c0ac243dd937b088e071fe71c6c 384 SUPERFAMILY SSF47819 202 305 1.27E-24 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CHH28_RS13880 69717c0ac243dd937b088e071fe71c6c 384 Gene3D G3DSA:1.10.150.80 305 382 0.23 T 29-03-2018 CHH28_RS13880 69717c0ac243dd937b088e071fe71c6c 384 SMART SM00341 216 295 8.4E-5 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CHH28_RS13880 69717c0ac243dd937b088e071fe71c6c 384 Gene3D G3DSA:3.30.420.10 8 199 4.0E-38 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS13880 69717c0ac243dd937b088e071fe71c6c 384 SUPERFAMILY SSF47819 301 375 1.01E-13 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CHH28_RS13880 69717c0ac243dd937b088e071fe71c6c 384 TIGRFAM TIGR01388 rnd: ribonuclease D 11 370 4.9E-114 T 29-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CHH28_RS13880 69717c0ac243dd937b088e071fe71c6c 384 SMART SM00474 9 177 7.5E-38 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CHH28_RS13880 69717c0ac243dd937b088e071fe71c6c 384 Pfam PF01612 3'-5' exonuclease 10 176 5.0E-34 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CHH28_RS13880 69717c0ac243dd937b088e071fe71c6c 384 Gene3D G3DSA:1.10.150.80 203 304 1.4E-19 T 29-03-2018 CHH28_RS15660 9c2fceffc08cb2815899551b954b9f36 293 SUPERFAMILY SSF48179 165 290 4.19E-39 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CHH28_RS15660 9c2fceffc08cb2815899551b954b9f36 293 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 160 1.7E-43 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CHH28_RS15660 9c2fceffc08cb2815899551b954b9f36 293 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 29-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CHH28_RS15660 9c2fceffc08cb2815899551b954b9f36 293 Gene3D G3DSA:1.10.1040.10 172 292 6.9E-34 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CHH28_RS15660 9c2fceffc08cb2815899551b954b9f36 293 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 284 3.2E-34 T 29-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CHH28_RS15660 9c2fceffc08cb2815899551b954b9f36 293 PIRSF PIRSF000103 1 293 9.6E-69 T 29-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CHH28_RS15660 9c2fceffc08cb2815899551b954b9f36 293 SUPERFAMILY SSF51735 3 163 1.84E-43 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS15660 9c2fceffc08cb2815899551b954b9f36 293 Gene3D G3DSA:3.40.50.720 2 171 8.0E-33 T 29-03-2018 CHH28_RS06555 7b4d74d3f9642cb06d32db4a66ba33f0 222 Pfam PF03575 Peptidase family S51 7 196 6.9E-42 T 29-03-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 CHH28_RS06555 7b4d74d3f9642cb06d32db4a66ba33f0 222 Gene3D G3DSA:3.40.50.880 2 220 3.0E-39 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS06555 7b4d74d3f9642cb06d32db4a66ba33f0 222 SUPERFAMILY SSF52317 26 200 2.54E-24 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS18625 5b91a36b6229b38f87fcdc4f2716cd10 341 Gene3D G3DSA:1.10.10.60 283 341 5.9E-11 T 29-03-2018 CHH28_RS18625 5b91a36b6229b38f87fcdc4f2716cd10 341 Pfam PF12833 Helix-turn-helix domain 251 327 3.5E-16 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS18625 5b91a36b6229b38f87fcdc4f2716cd10 341 SUPERFAMILY SSF46689 281 328 3.05E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS18625 5b91a36b6229b38f87fcdc4f2716cd10 341 SMART SM00342 245 326 5.0E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS18625 5b91a36b6229b38f87fcdc4f2716cd10 341 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 203 1.4E-45 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS18625 5b91a36b6229b38f87fcdc4f2716cd10 341 Gene3D G3DSA:1.10.10.60 210 282 3.7E-4 T 29-03-2018 CHH28_RS01295 5823aa2ad7989aa7adea039e3826f90c 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 238 1.2E-12 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS01295 5823aa2ad7989aa7adea039e3826f90c 245 Gene3D G3DSA:3.40.190.10 106 206 8.4E-10 T 29-03-2018 CHH28_RS01295 5823aa2ad7989aa7adea039e3826f90c 245 SUPERFAMILY SSF53850 23 238 1.19E-25 T 29-03-2018 CHH28_RS01295 5823aa2ad7989aa7adea039e3826f90c 245 Gene3D G3DSA:3.40.190.10 20 105 0.0013 T 29-03-2018 CHH28_RS14245 38e1307e0dfc6a84cfbae44797e52a30 354 Pfam PF01207 Dihydrouridine synthase (Dus) 29 333 4.7E-83 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CHH28_RS14245 38e1307e0dfc6a84cfbae44797e52a30 354 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 108 126 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CHH28_RS14245 38e1307e0dfc6a84cfbae44797e52a30 354 SUPERFAMILY SSF51395 26 343 1.97E-69 T 29-03-2018 CHH28_RS14245 38e1307e0dfc6a84cfbae44797e52a30 354 Gene3D G3DSA:3.20.20.70 23 262 9.5E-40 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS14245 38e1307e0dfc6a84cfbae44797e52a30 354 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 21 346 50.084 T 29-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CHH28_RS14245 38e1307e0dfc6a84cfbae44797e52a30 354 PIRSF PIRSF006621 16 353 1.1E-73 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CHH28_RS14245 38e1307e0dfc6a84cfbae44797e52a30 354 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 25 345 2.3E-137 T 29-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CHH28_RS01415 93b77cba487b9080de1bcfc4bd7d0804 71 Gene3D G3DSA:1.20.5.1150 16 52 2.1E-19 T 29-03-2018 CHH28_RS01415 93b77cba487b9080de1bcfc4bd7d0804 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.2E-24 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS01415 93b77cba487b9080de1bcfc4bd7d0804 71 Pfam PF01165 Ribosomal protein S21 4 56 4.4E-23 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS01415 93b77cba487b9080de1bcfc4bd7d0804 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 29-03-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS01415 93b77cba487b9080de1bcfc4bd7d0804 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.999 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS01415 93b77cba487b9080de1bcfc4bd7d0804 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.0E-15 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS01415 93b77cba487b9080de1bcfc4bd7d0804 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.0E-15 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS01415 93b77cba487b9080de1bcfc4bd7d0804 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.0E-15 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS01415 93b77cba487b9080de1bcfc4bd7d0804 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.0E-15 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS01415 93b77cba487b9080de1bcfc4bd7d0804 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 42 3.0E-9 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS12090 16cf66a2e55e41a0532827a24bfb04af 386 Gene3D G3DSA:4.10.320.10 113 164 7.1E-16 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CHH28_RS12090 16cf66a2e55e41a0532827a24bfb04af 386 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 170 378 6.3E-49 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CHH28_RS12090 16cf66a2e55e41a0532827a24bfb04af 386 Pfam PF02817 e3 binding domain 122 157 6.5E-14 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CHH28_RS12090 16cf66a2e55e41a0532827a24bfb04af 386 Gene3D G3DSA:3.30.559.10 165 383 5.7E-49 T 29-03-2018 CHH28_RS12090 16cf66a2e55e41a0532827a24bfb04af 386 SUPERFAMILY SSF51230 3 90 4.19E-25 T 29-03-2018 IPR011053 Single hybrid motif CHH28_RS12090 16cf66a2e55e41a0532827a24bfb04af 386 SUPERFAMILY SSF47005 120 159 4.58E-10 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CHH28_RS12090 16cf66a2e55e41a0532827a24bfb04af 386 SUPERFAMILY SSF52777 170 378 3.6E-53 T 29-03-2018 CHH28_RS12090 16cf66a2e55e41a0532827a24bfb04af 386 Gene3D G3DSA:2.40.50.100 45 111 1.9E-7 T 29-03-2018 CHH28_RS12090 16cf66a2e55e41a0532827a24bfb04af 386 Pfam PF00364 Biotin-requiring enzyme 4 74 2.3E-19 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CHH28_RS12090 16cf66a2e55e41a0532827a24bfb04af 386 Gene3D G3DSA:3.90.1170.30 2 44 1.2E-12 T 29-03-2018 CHH28_RS12090 16cf66a2e55e41a0532827a24bfb04af 386 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CHH28_RS19325 64aa4fab8f3d475f41e641169af86267 794 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 549 557 5.7E-9 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS19325 64aa4fab8f3d475f41e641169af86267 794 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 497 509 5.7E-9 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS19325 64aa4fab8f3d475f41e641169af86267 794 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 414 427 5.7E-9 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS19325 64aa4fab8f3d475f41e641169af86267 794 Gene3D G3DSA:3.90.1600.10 401 646 5.4E-47 T 29-03-2018 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS19325 64aa4fab8f3d475f41e641169af86267 794 SMART SM00486 143 563 8.6E-60 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS19325 64aa4fab8f3d475f41e641169af86267 794 Gene3D G3DSA:3.30.420.10 142 364 1.3E-41 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS19325 64aa4fab8f3d475f41e641169af86267 794 Pfam PF03104 DNA polymerase family B, exonuclease domain 92 284 1.3E-18 T 29-03-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS19325 64aa4fab8f3d475f41e641169af86267 794 SUPERFAMILY SSF53098 8 387 6.7E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS19325 64aa4fab8f3d475f41e641169af86267 794 ProSitePatterns PS00116 DNA polymerase family B signature. 551 559 - T 29-03-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS19325 64aa4fab8f3d475f41e641169af86267 794 Pfam PF00136 DNA polymerase family B 374 721 5.5E-42 T 29-03-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS19325 64aa4fab8f3d475f41e641169af86267 794 SUPERFAMILY SSF56672 383 788 2.67E-101 T 29-03-2018 CHH28_RS14950 e338daea7426561a6976918eb5646d24 163 Gene3D G3DSA:3.50.30.40 1 162 1.8E-50 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CHH28_RS14950 e338daea7426561a6976918eb5646d24 163 Pfam PF03737 Aldolase/RraA 6 154 8.5E-46 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CHH28_RS14950 e338daea7426561a6976918eb5646d24 163 SUPERFAMILY SSF89562 4 159 2.75E-51 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CHH28_RS14950 e338daea7426561a6976918eb5646d24 163 TIGRFAM TIGR01935 NOT-MenG: RraA family 6 155 1.3E-70 T 29-03-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 CHH28_RS15410 40e14b5fbef39d1203e5d01c63457450 561 Gene3D G3DSA:3.40.50.620 43 151 6.3E-39 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS15410 40e14b5fbef39d1203e5d01c63457450 561 Gene3D G3DSA:3.40.50.620 155 260 8.6E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS15410 40e14b5fbef39d1203e5d01c63457450 561 SUPERFAMILY SSF50715 340 550 1.57E-60 T 29-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CHH28_RS15410 40e14b5fbef39d1203e5d01c63457450 561 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 550 5.5E-225 T 29-03-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CHH28_RS15410 40e14b5fbef39d1203e5d01c63457450 561 SUPERFAMILY SSF52374 27 346 4.74E-101 T 29-03-2018 CHH28_RS15410 40e14b5fbef39d1203e5d01c63457450 561 Gene3D G3DSA:3.40.50.620 21 42 0.077 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS15410 40e14b5fbef39d1203e5d01c63457450 561 Gene3D G3DSA:2.40.240.10 344 464 1.9E-38 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CHH28_RS15410 40e14b5fbef39d1203e5d01c63457450 561 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 530 6.0E-50 T 29-03-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CHH28_RS15410 40e14b5fbef39d1203e5d01c63457450 561 Gene3D G3DSA:2.40.240.10 465 549 1.5E-29 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CHH28_RS15410 40e14b5fbef39d1203e5d01c63457450 561 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 8.6E-10 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CHH28_RS15410 40e14b5fbef39d1203e5d01c63457450 561 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 8.6E-10 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CHH28_RS15410 40e14b5fbef39d1203e5d01c63457450 561 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 8.6E-10 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CHH28_RS15410 40e14b5fbef39d1203e5d01c63457450 561 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 8.6E-10 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CHH28_RS15410 40e14b5fbef39d1203e5d01c63457450 561 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 551 50.523 T 29-03-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 CHH28_RS15410 40e14b5fbef39d1203e5d01c63457450 561 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 27 331 5.5E-111 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CHH28_RS15410 40e14b5fbef39d1203e5d01c63457450 561 Gene3D G3DSA:1.10.1160.10 261 338 4.2E-33 T 29-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CHH28_RS15410 40e14b5fbef39d1203e5d01c63457450 561 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS10880 4f86503bb0598e583f2bd8ecedeadd94 286 Gene3D G3DSA:1.20.1260.10 46 258 5.6E-7 T 29-03-2018 IPR012347 Ferritin-related CHH28_RS10880 4f86503bb0598e583f2bd8ecedeadd94 286 Pfam PF10118 Predicted metal-dependent hydrolase 21 266 5.3E-84 T 29-03-2018 IPR016516 Uncharacterised conserved protein UCP07580 CHH28_RS10880 4f86503bb0598e583f2bd8ecedeadd94 286 PIRSF PIRSF007580 5 285 1.1E-75 T 29-03-2018 IPR016516 Uncharacterised conserved protein UCP07580 CHH28_RS11565 f37e7ad2afbaa600abdbb3ca4d4424ee 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 296 309 3.7E-20 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS11565 f37e7ad2afbaa600abdbb3ca4d4424ee 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 241 255 3.7E-20 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS11565 f37e7ad2afbaa600abdbb3ca4d4424ee 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 259 269 3.7E-20 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS11565 f37e7ad2afbaa600abdbb3ca4d4424ee 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 272 290 3.7E-20 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS11565 f37e7ad2afbaa600abdbb3ca4d4424ee 315 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 207 311 6.0E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS11565 f37e7ad2afbaa600abdbb3ca4d4424ee 315 Pfam PF00512 His Kinase A (phospho-acceptor) domain 61 163 6.1E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS11565 f37e7ad2afbaa600abdbb3ca4d4424ee 315 Gene3D G3DSA:1.10.287.130 38 156 3.6E-10 T 29-03-2018 CHH28_RS11565 f37e7ad2afbaa600abdbb3ca4d4424ee 315 Gene3D G3DSA:3.30.565.10 157 312 1.9E-43 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS11565 f37e7ad2afbaa600abdbb3ca4d4424ee 315 SUPERFAMILY SSF47384 49 97 2.35E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS11565 f37e7ad2afbaa600abdbb3ca4d4424ee 315 SMART SM00387 204 312 2.2E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS11565 f37e7ad2afbaa600abdbb3ca4d4424ee 315 SUPERFAMILY SSF55874 154 310 1.83E-45 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03970 75eec8d6eb9b56fdfa4bcdc753fb2b56 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 34.901 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03970 75eec8d6eb9b56fdfa4bcdc753fb2b56 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 29-03-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03970 75eec8d6eb9b56fdfa4bcdc753fb2b56 286 Gene3D G3DSA:1.10.287.80 233 281 6.0E-16 T 29-03-2018 CHH28_RS03970 75eec8d6eb9b56fdfa4bcdc753fb2b56 286 SUPERFAMILY SSF52943 5 286 3.4E-91 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03970 75eec8d6eb9b56fdfa4bcdc753fb2b56 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 3.5E-103 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03970 75eec8d6eb9b56fdfa4bcdc753fb2b56 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 3.2E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03970 75eec8d6eb9b56fdfa4bcdc753fb2b56 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 3.2E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03970 75eec8d6eb9b56fdfa4bcdc753fb2b56 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 3.2E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03970 75eec8d6eb9b56fdfa4bcdc753fb2b56 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 3.2E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03970 75eec8d6eb9b56fdfa4bcdc753fb2b56 286 Gene3D G3DSA:3.40.1380.10 27 232 5.2E-68 T 29-03-2018 CHH28_RS03970 75eec8d6eb9b56fdfa4bcdc753fb2b56 286 Pfam PF00231 ATP synthase 5 285 1.3E-92 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS16990 db83ec717eacf71d3135dd1d13828c99 174 SUPERFAMILY SSF141523 8 60 2.09E-20 T 29-03-2018 CHH28_RS16990 db83ec717eacf71d3135dd1d13828c99 174 SUPERFAMILY SSF141523 88 161 2.09E-20 T 29-03-2018 CHH28_RS16990 db83ec717eacf71d3135dd1d13828c99 174 Gene3D G3DSA:2.40.440.10 3 162 1.0E-21 T 29-03-2018 CHH28_RS16990 db83ec717eacf71d3135dd1d13828c99 174 Pfam PF03734 L,D-transpeptidase catalytic domain 8 160 1.9E-15 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 Pfam PF01588 Putative tRNA binding domain 599 692 9.4E-23 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 Pfam PF09334 tRNA synthetases class I (M) 9 397 3.3E-158 T 29-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 SUPERFAMILY SSF52374 6 142 1.66E-99 T 29-03-2018 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 SUPERFAMILY SSF52374 177 388 1.66E-99 T 29-03-2018 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 Gene3D G3DSA:3.40.50.620 5 76 5.6E-20 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 536 1.0E-182 T 29-03-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 27 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 Gene3D G3DSA:1.10.730.10 374 537 1.7E-32 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 Gene3D G3DSA:2.40.50.140 585 695 2.1E-29 T 29-03-2018 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 SUPERFAMILY SSF47323 390 544 2.06E-39 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 Hamap MF_00098 Methionine--tRNA ligase [metG]. 7 546 39.481 T 29-03-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 PRINTS PR01041 Methionyl-tRNA synthetase signature 43 57 2.5E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 PRINTS PR01041 Methionyl-tRNA synthetase signature 11 24 2.5E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 PRINTS PR01041 Methionyl-tRNA synthetase signature 252 263 2.5E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 PRINTS PR01041 Methionyl-tRNA synthetase signature 385 396 2.5E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 PRINTS PR01041 Methionyl-tRNA synthetase signature 91 102 2.5E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 2.5E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 Gene3D G3DSA:2.20.28.20 143 176 4.0E-14 T 29-03-2018 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 SUPERFAMILY SSF50249 589 694 3.67E-32 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 558 694 2.1E-43 T 29-03-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 Gene3D G3DSA:3.40.50.620 251 372 2.4E-20 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 SUPERFAMILY SSF57770 143 176 1.7E-11 T 29-03-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CHH28_RS10400 6bc9a9879558528f2d1ca755fb87bb43 695 Gene3D G3DSA:2.170.220.10 182 250 7.7E-16 T 29-03-2018 CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 Pfam PF02463 RecF/RecN/SMC N terminal domain 829 1152 1.9E-29 T 29-03-2018 IPR003395 RecF/RecN/SMC, N-terminal CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 575 7.6E-33 T 29-03-2018 IPR003395 RecF/RecN/SMC, N-terminal CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 Gene3D G3DSA:3.40.50.300 1 183 5.4E-34 T 29-03-2018 CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1159 0.0 T 29-03-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 SUPERFAMILY SSF75553 475 669 2.75E-13 T 29-03-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 Gene3D G3DSA:3.40.50.300 931 1167 2.4E-29 T 29-03-2018 CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 SUPERFAMILY SSF52540 806 898 1.29E-25 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 SUPERFAMILY SSF52540 961 1162 1.29E-25 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 Gene3D G3DSA:1.20.120.330 728 836 0.0052 T 29-03-2018 CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 Gene3D G3DSA:1.10.287.160 465 724 7.3E-6 T 29-03-2018 CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 PIRSF PIRSF005719 1 1166 9.6E-274 T 29-03-2018 IPR024704 Structural maintenance of chromosomes protein CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 Gene3D G3DSA:1.20.5.340 837 930 0.012 T 29-03-2018 CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 SUPERFAMILY SSF52540 411 422 1.12E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 SUPERFAMILY SSF52540 453 500 1.12E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 SUPERFAMILY SSF52540 1 210 1.12E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 Pfam PF06470 SMC proteins Flexible Hinge Domain 525 617 2.0E-6 T 29-03-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1161 23.633 T 29-03-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 SMART SM00968 521 620 3.0E-4 T 29-03-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 CHH28_RS13545 6083830b3e6446c64e2eeb76158fa08a 1167 Gene3D G3DSA:1.10.287.620 237 391 0.0033 T 29-03-2018 CHH28_RS02690 90388c03400197f767f523ec3b98dbc2 678 Gene3D G3DSA:2.60.40.10 217 301 9.1E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS02690 90388c03400197f767f523ec3b98dbc2 678 SUPERFAMILY SSF49265 137 210 7.93E-5 T 29-03-2018 IPR003961 Fibronectin type III GO:0005515 CHH28_RS02690 90388c03400197f767f523ec3b98dbc2 678 Gene3D G3DSA:2.60.40.10 129 216 1.7E-8 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS02690 90388c03400197f767f523ec3b98dbc2 678 Gene3D G3DSA:2.60.40.10 25 117 4.3E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS17655 1b3e71fcf0d09359b42e6489ef64bfa2 363 SMART SM00830 11 95 8.6E-31 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CHH28_RS17655 1b3e71fcf0d09359b42e6489ef64bfa2 363 SUPERFAMILY SSF55021 265 360 3.88E-27 T 29-03-2018 CHH28_RS17655 1b3e71fcf0d09359b42e6489ef64bfa2 363 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 246 268 - T 29-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CHH28_RS17655 1b3e71fcf0d09359b42e6489ef64bfa2 363 Gene3D G3DSA:3.30.70.260 272 362 3.7E-29 T 29-03-2018 CHH28_RS17655 1b3e71fcf0d09359b42e6489ef64bfa2 363 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 308 315 - T 29-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CHH28_RS17655 1b3e71fcf0d09359b42e6489ef64bfa2 363 Pfam PF00800 Prephenate dehydratase 97 272 1.4E-61 T 29-03-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CHH28_RS17655 1b3e71fcf0d09359b42e6489ef64bfa2 363 Pfam PF01817 Chorismate mutase type II 11 93 1.3E-23 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CHH28_RS17655 1b3e71fcf0d09359b42e6489ef64bfa2 363 PIRSF PIRSF001500 1 363 2.0E-138 T 29-03-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CHH28_RS17655 1b3e71fcf0d09359b42e6489ef64bfa2 363 TIGRFAM TIGR01807 CM_P2: chorismate mutase 7 85 2.9E-32 T 29-03-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 CHH28_RS17655 1b3e71fcf0d09359b42e6489ef64bfa2 363 SUPERFAMILY SSF48600 6 99 1.33E-20 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CHH28_RS17655 1b3e71fcf0d09359b42e6489ef64bfa2 363 Pfam PF01842 ACT domain 282 343 5.4E-7 T 29-03-2018 IPR002912 ACT domain CHH28_RS17655 1b3e71fcf0d09359b42e6489ef64bfa2 363 Gene3D G3DSA:3.40.190.10 102 182 6.1E-32 T 29-03-2018 CHH28_RS17655 1b3e71fcf0d09359b42e6489ef64bfa2 363 Gene3D G3DSA:1.20.59.10 1 101 5.1E-39 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CHH28_RS17655 1b3e71fcf0d09359b42e6489ef64bfa2 363 Gene3D G3DSA:3.40.190.10 183 259 6.1E-26 T 29-03-2018 CHH28_RS17655 1b3e71fcf0d09359b42e6489ef64bfa2 363 SUPERFAMILY SSF53850 96 278 2.17E-57 T 29-03-2018 CHH28_RS15795 6ed3e5f46fd71d560a21489238135ec6 378 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 66 368 4.7E-79 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CHH28_RS15795 6ed3e5f46fd71d560a21489238135ec6 378 Gene3D G3DSA:1.20.1600.10 125 319 4.4E-18 T 29-03-2018 CHH28_RS15795 6ed3e5f46fd71d560a21489238135ec6 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 76 291 5.6E-34 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CHH28_RS15795 6ed3e5f46fd71d560a21489238135ec6 378 Gene3D G3DSA:2.40.50.100 47 123 9.2E-10 T 29-03-2018 CHH28_RS15795 6ed3e5f46fd71d560a21489238135ec6 378 SUPERFAMILY SSF111369 79 296 4.32E-43 T 29-03-2018 CHH28_RS11820 9f222f055bda6a3bb49acbb5e0aafef5 1222 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 9 1207 0.0 T 29-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CHH28_RS11820 9f222f055bda6a3bb49acbb5e0aafef5 1222 Pfam PF13361 UvrD-like helicase C-terminal domain 465 850 4.4E-17 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CHH28_RS11820 9f222f055bda6a3bb49acbb5e0aafef5 1222 Gene3D G3DSA:3.40.50.300 9 97 8.3E-6 T 29-03-2018 CHH28_RS11820 9f222f055bda6a3bb49acbb5e0aafef5 1222 Gene3D G3DSA:3.90.320.10 909 1212 1.9E-73 T 29-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 CHH28_RS11820 9f222f055bda6a3bb49acbb5e0aafef5 1222 Pfam PF00580 UvrD/REP helicase N-terminal domain 13 459 9.7E-58 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CHH28_RS11820 9f222f055bda6a3bb49acbb5e0aafef5 1222 SUPERFAMILY SSF52540 128 212 2.42E-102 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11820 9f222f055bda6a3bb49acbb5e0aafef5 1222 SUPERFAMILY SSF52540 550 799 2.42E-102 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11820 9f222f055bda6a3bb49acbb5e0aafef5 1222 SUPERFAMILY SSF52540 830 854 2.42E-102 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11820 9f222f055bda6a3bb49acbb5e0aafef5 1222 SUPERFAMILY SSF52540 346 516 2.42E-102 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11820 9f222f055bda6a3bb49acbb5e0aafef5 1222 SUPERFAMILY SSF52540 15 82 2.42E-102 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11820 9f222f055bda6a3bb49acbb5e0aafef5 1222 Gene3D G3DSA:1.10.3170.10 165 362 8.1E-42 T 29-03-2018 CHH28_RS11820 9f222f055bda6a3bb49acbb5e0aafef5 1222 SUPERFAMILY SSF52980 919 1209 3.16E-69 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CHH28_RS11820 9f222f055bda6a3bb49acbb5e0aafef5 1222 Pfam PF12705 PD-(D/E)XK nuclease superfamily 981 1185 2.7E-7 T 29-03-2018 CHH28_RS11820 9f222f055bda6a3bb49acbb5e0aafef5 1222 Gene3D G3DSA:3.40.50.300 468 639 2.3E-16 T 29-03-2018 CHH28_RS11820 9f222f055bda6a3bb49acbb5e0aafef5 1222 Gene3D G3DSA:3.40.50.300 640 862 4.4E-23 T 29-03-2018 CHH28_RS11820 9f222f055bda6a3bb49acbb5e0aafef5 1222 Gene3D G3DSA:3.40.50.300 363 448 2.2E-4 T 29-03-2018 CHH28_RS11820 9f222f055bda6a3bb49acbb5e0aafef5 1222 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 7 1208 21.673 T 29-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CHH28_RS03810 cacf2943f0d1b3b8360a3f0b27e4b466 243 Pfam PF00072 Response regulator receiver domain 5 114 1.3E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS03810 cacf2943f0d1b3b8360a3f0b27e4b466 243 Gene3D G3DSA:2.40.50.40 139 202 4.6E-12 T 29-03-2018 CHH28_RS03810 cacf2943f0d1b3b8360a3f0b27e4b466 243 Gene3D G3DSA:3.40.50.2300 2 138 5.9E-32 T 29-03-2018 CHH28_RS03810 cacf2943f0d1b3b8360a3f0b27e4b466 243 SUPERFAMILY SSF52172 3 137 5.27E-33 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS03810 cacf2943f0d1b3b8360a3f0b27e4b466 243 Pfam PF04397 LytTr DNA-binding domain 147 240 1.5E-21 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CHH28_RS03810 cacf2943f0d1b3b8360a3f0b27e4b466 243 SMART SM00448 3 114 1.6E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS03810 cacf2943f0d1b3b8360a3f0b27e4b466 243 SMART SM00850 144 241 2.0E-25 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CHH28_RS07315 210c0ccaf6c7a1942ac80b836262fd50 246 Gene3D G3DSA:3.40.50.720 1 245 3.2E-63 T 29-03-2018 CHH28_RS07315 210c0ccaf6c7a1942ac80b836262fd50 246 SUPERFAMILY SSF51735 7 243 1.19E-66 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS07315 210c0ccaf6c7a1942ac80b836262fd50 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CHH28_RS07315 210c0ccaf6c7a1942ac80b836262fd50 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 3.1E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07315 210c0ccaf6c7a1942ac80b836262fd50 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 3.1E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07315 210c0ccaf6c7a1942ac80b836262fd50 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 3.1E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07315 210c0ccaf6c7a1942ac80b836262fd50 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 2.6E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07315 210c0ccaf6c7a1942ac80b836262fd50 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.6E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07315 210c0ccaf6c7a1942ac80b836262fd50 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 2.6E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07315 210c0ccaf6c7a1942ac80b836262fd50 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.6E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07315 210c0ccaf6c7a1942ac80b836262fd50 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.6E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07315 210c0ccaf6c7a1942ac80b836262fd50 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.6E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07315 210c0ccaf6c7a1942ac80b836262fd50 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 4.4E-56 T 29-03-2018 CHH28_RS12800 d07ce8f8c765b6fe85ddd7bebddc5d73 633 Gene3D G3DSA:3.30.565.10 31 224 4.3E-56 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS12800 d07ce8f8c765b6fe85ddd7bebddc5d73 633 Pfam PF00183 Hsp90 protein 230 630 7.7E-128 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CHH28_RS12800 d07ce8f8c765b6fe85ddd7bebddc5d73 633 SUPERFAMILY SSF110942 516 629 1.57E-30 T 29-03-2018 CHH28_RS12800 d07ce8f8c765b6fe85ddd7bebddc5d73 633 PRINTS PR00775 90kDa heat shock protein signature 192 210 5.0E-63 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CHH28_RS12800 d07ce8f8c765b6fe85ddd7bebddc5d73 633 PRINTS PR00775 90kDa heat shock protein signature 77 94 5.0E-63 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CHH28_RS12800 d07ce8f8c765b6fe85ddd7bebddc5d73 633 PRINTS PR00775 90kDa heat shock protein signature 174 191 5.0E-63 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CHH28_RS12800 d07ce8f8c765b6fe85ddd7bebddc5d73 633 PRINTS PR00775 90kDa heat shock protein signature 122 144 5.0E-63 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CHH28_RS12800 d07ce8f8c765b6fe85ddd7bebddc5d73 633 PRINTS PR00775 90kDa heat shock protein signature 28 50 5.0E-63 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CHH28_RS12800 d07ce8f8c765b6fe85ddd7bebddc5d73 633 PRINTS PR00775 90kDa heat shock protein signature 95 112 5.0E-63 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CHH28_RS12800 d07ce8f8c765b6fe85ddd7bebddc5d73 633 PRINTS PR00775 90kDa heat shock protein signature 7 27 5.0E-63 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CHH28_RS12800 d07ce8f8c765b6fe85ddd7bebddc5d73 633 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 185 8.7E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS12800 d07ce8f8c765b6fe85ddd7bebddc5d73 633 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 629 32.085 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CHH28_RS12800 d07ce8f8c765b6fe85ddd7bebddc5d73 633 SUPERFAMILY SSF54211 235 490 1.97E-97 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS12800 d07ce8f8c765b6fe85ddd7bebddc5d73 633 SMART SM00387 29 186 7.4E-10 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS12800 d07ce8f8c765b6fe85ddd7bebddc5d73 633 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 27 36 - T 29-03-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 CHH28_RS12800 d07ce8f8c765b6fe85ddd7bebddc5d73 633 SUPERFAMILY SSF55874 7 215 2.36E-66 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS12800 d07ce8f8c765b6fe85ddd7bebddc5d73 633 PIRSF PIRSF002583 2 633 7.1E-215 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CHH28_RS17910 4f6bcaee2c720d2554ce3592d67b10b3 82 SUPERFAMILY SSF64307 6 79 3.01E-22 T 29-03-2018 IPR001455 TusA-like domain CHH28_RS17910 4f6bcaee2c720d2554ce3592d67b10b3 82 Gene3D G3DSA:3.30.110.40 5 80 1.2E-26 T 29-03-2018 IPR001455 TusA-like domain CHH28_RS17910 4f6bcaee2c720d2554ce3592d67b10b3 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 11 35 - T 29-03-2018 IPR001455 TusA-like domain CHH28_RS17910 4f6bcaee2c720d2554ce3592d67b10b3 82 Pfam PF01206 Sulfurtransferase TusA 10 78 7.1E-23 T 29-03-2018 IPR001455 TusA-like domain CHH28_RS14420 439a8d324c50d56431998bff8594cdbc 306 Gene3D G3DSA:1.10.3210.10 19 294 4.7E-39 T 29-03-2018 CHH28_RS14420 439a8d324c50d56431998bff8594cdbc 306 Pfam PF08668 HDOD domain 42 236 1.6E-47 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD CHH28_RS14420 439a8d324c50d56431998bff8594cdbc 306 SUPERFAMILY SSF109604 41 301 2.98E-56 T 29-03-2018 CHH28_RS13285 9c44e918c928c58d283b0f9d9f438e13 307 Pfam PF00005 ABC transporter 22 166 3.4E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS13285 9c44e918c928c58d283b0f9d9f438e13 307 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS13285 9c44e918c928c58d283b0f9d9f438e13 307 SMART SM00382 31 216 2.3E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS13285 9c44e918c928c58d283b0f9d9f438e13 307 Gene3D G3DSA:3.40.50.300 2 268 2.3E-63 T 29-03-2018 CHH28_RS13285 9c44e918c928c58d283b0f9d9f438e13 307 SUPERFAMILY SSF52540 3 233 5.74E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS03635 392ca96cc1eef70701c743c343cfc5ab 256 Pfam PF00795 Carbon-nitrogen hydrolase 3 131 5.5E-9 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CHH28_RS03635 392ca96cc1eef70701c743c343cfc5ab 256 Gene3D G3DSA:3.60.110.10 1 240 4.1E-28 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CHH28_RS03635 392ca96cc1eef70701c743c343cfc5ab 256 SUPERFAMILY SSF56317 3 234 3.79E-24 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CHH28_RS15635 353b84fe868c9248c403320dbab85d42 236 Gene3D G3DSA:1.10.1060.10 106 236 1.1E-29 T 29-03-2018 CHH28_RS15635 353b84fe868c9248c403320dbab85d42 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 3 109 6.6E-30 T 29-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS15635 353b84fe868c9248c403320dbab85d42 236 SUPERFAMILY SSF54292 3 105 3.68E-27 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CHH28_RS15635 353b84fe868c9248c403320dbab85d42 236 Gene3D G3DSA:3.10.20.30 1 105 1.3E-28 T 29-03-2018 IPR012675 Beta-grasp domain CHH28_RS15635 353b84fe868c9248c403320dbab85d42 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 5 228 8.6E-82 T 29-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS15635 353b84fe868c9248c403320dbab85d42 236 SUPERFAMILY SSF46548 106 232 4.71E-38 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CHH28_RS15635 353b84fe868c9248c403320dbab85d42 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 5.6E-9 T 29-03-2018 CHH28_RS15635 353b84fe868c9248c403320dbab85d42 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CHH28_RS13010 9eacf26e71e62b616b55a93cc3f221e5 561 SUPERFAMILY SSF48371 329 547 5.18E-7 T 29-03-2018 IPR016024 Armadillo-type fold GO:0005488 CHH28_RS13010 9eacf26e71e62b616b55a93cc3f221e5 561 Gene3D G3DSA:1.25.10.20 234 561 1.4E-7 T 29-03-2018 CHH28_RS16050 c6edf70b4f303e8e5a51b1db015e9508 369 Gene3D G3DSA:3.60.10.10 68 369 6.0E-21 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS16050 c6edf70b4f303e8e5a51b1db015e9508 369 SUPERFAMILY SSF56219 68 360 2.22E-26 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS16050 c6edf70b4f303e8e5a51b1db015e9508 369 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 73 258 2.5E-6 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS03720 024335618d291f795e2e7608bc970d66 428 TIGRFAM TIGR01224 hutI: imidazolonepropionase 37 418 1.2E-128 T 29-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CHH28_RS03720 024335618d291f795e2e7608bc970d66 428 Pfam PF01979 Amidohydrolase family 79 418 2.3E-18 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CHH28_RS03720 024335618d291f795e2e7608bc970d66 428 SUPERFAMILY SSF51556 81 379 3.12E-78 T 29-03-2018 IPR032466 Metal-dependent hydrolase CHH28_RS03720 024335618d291f795e2e7608bc970d66 428 Gene3D G3DSA:3.20.20.140 95 381 2.3E-56 T 29-03-2018 CHH28_RS03720 024335618d291f795e2e7608bc970d66 428 SUPERFAMILY SSF51338 3 81 2.96E-19 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS03720 024335618d291f795e2e7608bc970d66 428 SUPERFAMILY SSF51338 382 420 2.96E-19 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS03720 024335618d291f795e2e7608bc970d66 428 Gene3D G3DSA:2.30.40.10 1 94 1.1E-16 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS03720 024335618d291f795e2e7608bc970d66 428 Hamap MF_00372 Imidazolonepropionase [hutI]. 4 420 38.807 T 29-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CHH28_RS15235 097332769746522635c2ee5b8dac5936 357 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 34 320 1.0E-68 T 29-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CHH28_RS15235 097332769746522635c2ee5b8dac5936 357 PIRSF PIRSF039026 1 357 1.2E-142 T 29-03-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like CHH28_RS15235 097332769746522635c2ee5b8dac5936 357 Gene3D G3DSA:3.40.190.10 160 329 4.7E-4 T 29-03-2018 CHH28_RS07245 afb0c4954fc89fed49bfb3b551671893 396 Pfam PF00155 Aminotransferase class I and II 32 388 2.7E-49 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CHH28_RS07245 afb0c4954fc89fed49bfb3b551671893 396 Gene3D G3DSA:3.90.1150.10 281 396 3.4E-20 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS07245 afb0c4954fc89fed49bfb3b551671893 396 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 393 2.0E-201 T 29-03-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 CHH28_RS07245 afb0c4954fc89fed49bfb3b551671893 396 Gene3D G3DSA:3.40.640.10 51 280 1.6E-42 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS07245 afb0c4954fc89fed49bfb3b551671893 396 SUPERFAMILY SSF53383 3 394 2.75E-89 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS01150 7a44ad5350386bba1f83272a19345112 283 PIRSF PIRSF036480 2 283 9.9E-119 T 29-03-2018 CHH28_RS01150 7a44ad5350386bba1f83272a19345112 283 Gene3D G3DSA:3.30.70.260 1 84 6.0E-23 T 29-03-2018 CHH28_RS01150 7a44ad5350386bba1f83272a19345112 283 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 283 8.2E-112 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CHH28_RS01150 7a44ad5350386bba1f83272a19345112 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 235 257 6.5E-58 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CHH28_RS01150 7a44ad5350386bba1f83272a19345112 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 6.5E-58 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CHH28_RS01150 7a44ad5350386bba1f83272a19345112 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 111 138 6.5E-58 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CHH28_RS01150 7a44ad5350386bba1f83272a19345112 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 257 282 6.5E-58 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CHH28_RS01150 7a44ad5350386bba1f83272a19345112 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 89 111 6.5E-58 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CHH28_RS01150 7a44ad5350386bba1f83272a19345112 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 6.5E-58 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CHH28_RS01150 7a44ad5350386bba1f83272a19345112 283 Pfam PF00551 Formyl transferase 88 263 3.2E-40 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CHH28_RS01150 7a44ad5350386bba1f83272a19345112 283 Gene3D G3DSA:3.40.50.170 85 280 3.7E-55 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CHH28_RS01150 7a44ad5350386bba1f83272a19345112 283 Pfam PF01842 ACT domain 5 67 5.9E-7 T 29-03-2018 IPR002912 ACT domain CHH28_RS01150 7a44ad5350386bba1f83272a19345112 283 SUPERFAMILY SSF55021 5 83 1.08E-14 T 29-03-2018 CHH28_RS01150 7a44ad5350386bba1f83272a19345112 283 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 283 47.931 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CHH28_RS01150 7a44ad5350386bba1f83272a19345112 283 SUPERFAMILY SSF53328 88 283 1.96E-61 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CHH28_RS05790 c48490be673cd0a95cc0a4ee20bfd902 427 Gene3D G3DSA:3.40.640.10 172 305 6.0E-43 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS05790 c48490be673cd0a95cc0a4ee20bfd902 427 Pfam PF00202 Aminotransferase class-III 32 396 3.4E-76 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS05790 c48490be673cd0a95cc0a4ee20bfd902 427 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 426 1.1E-190 T 29-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CHH28_RS05790 c48490be673cd0a95cc0a4ee20bfd902 427 Gene3D G3DSA:3.90.1150.10 306 427 1.2E-18 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS05790 c48490be673cd0a95cc0a4ee20bfd902 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS05790 c48490be673cd0a95cc0a4ee20bfd902 427 SUPERFAMILY SSF53383 3 425 6.64E-133 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS05790 c48490be673cd0a95cc0a4ee20bfd902 427 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 427 104.636 T 29-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CHH28_RS05790 c48490be673cd0a95cc0a4ee20bfd902 427 Gene3D G3DSA:3.90.1150.10 1 171 1.1E-42 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS02535 31d4789c68aeb91cd0bbddedac6bcd1b 762 Gene3D G3DSA:3.40.710.10 232 590 3.2E-59 T 29-03-2018 CHH28_RS02535 31d4789c68aeb91cd0bbddedac6bcd1b 762 SUPERFAMILY SSF56601 203 225 2.14E-86 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS02535 31d4789c68aeb91cd0bbddedac6bcd1b 762 SUPERFAMILY SSF56601 252 605 2.14E-86 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS02535 31d4789c68aeb91cd0bbddedac6bcd1b 762 Gene3D G3DSA:1.10.3810.10 37 231 6.4E-58 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CHH28_RS02535 31d4789c68aeb91cd0bbddedac6bcd1b 762 SUPERFAMILY SSF53955 37 252 7.03E-65 T 29-03-2018 IPR023346 Lysozyme-like domain CHH28_RS02535 31d4789c68aeb91cd0bbddedac6bcd1b 762 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 32 760 1.3E-211 T 29-03-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 CHH28_RS02535 31d4789c68aeb91cd0bbddedac6bcd1b 762 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 672 757 1.8E-16 T 29-03-2018 IPR009647 Penicillin-binding, C-terminal CHH28_RS02535 31d4789c68aeb91cd0bbddedac6bcd1b 762 Gene3D G3DSA:2.60.40.10 689 762 0.0013 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS02535 31d4789c68aeb91cd0bbddedac6bcd1b 762 Pfam PF00905 Penicillin binding protein transpeptidase domain 298 504 1.8E-14 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CHH28_RS02535 31d4789c68aeb91cd0bbddedac6bcd1b 762 Pfam PF00912 Transglycosylase 45 221 1.8E-49 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CHH28_RS06655 5e1ae0e75670f7e939d73fe5d20dbbe6 370 Gene3D G3DSA:3.30.70.100 243 341 5.2E-16 T 29-03-2018 CHH28_RS06655 5e1ae0e75670f7e939d73fe5d20dbbe6 370 Pfam PF00924 Mechanosensitive ion channel 132 334 9.0E-54 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CHH28_RS06655 5e1ae0e75670f7e939d73fe5d20dbbe6 370 Gene3D G3DSA:2.30.30.60 190 242 2.3E-14 T 29-03-2018 CHH28_RS06655 5e1ae0e75670f7e939d73fe5d20dbbe6 370 SUPERFAMILY SSF82861 92 173 9.42E-12 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CHH28_RS06655 5e1ae0e75670f7e939d73fe5d20dbbe6 370 SUPERFAMILY SSF50182 174 241 3.92E-16 T 29-03-2018 IPR010920 LSM domain CHH28_RS06655 5e1ae0e75670f7e939d73fe5d20dbbe6 370 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 206 240 - T 29-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 CHH28_RS06655 5e1ae0e75670f7e939d73fe5d20dbbe6 370 SUPERFAMILY SSF82689 246 346 3.27E-18 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CHH28_RS10440 4a5ec4161b4c54c3ca0b100fdb11b895 302 Gene3D G3DSA:3.40.190.10 175 267 5.3E-26 T 29-03-2018 CHH28_RS10440 4a5ec4161b4c54c3ca0b100fdb11b895 302 Gene3D G3DSA:3.40.190.10 87 174 7.3E-12 T 29-03-2018 CHH28_RS10440 4a5ec4161b4c54c3ca0b100fdb11b895 302 SUPERFAMILY SSF53850 88 299 7.78E-42 T 29-03-2018 CHH28_RS10440 4a5ec4161b4c54c3ca0b100fdb11b895 302 SUPERFAMILY SSF46785 1 111 2.89E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS10440 4a5ec4161b4c54c3ca0b100fdb11b895 302 Gene3D G3DSA:1.10.10.10 1 86 3.7E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS10440 4a5ec4161b4c54c3ca0b100fdb11b895 302 Pfam PF03466 LysR substrate binding domain 87 296 1.9E-40 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS10440 4a5ec4161b4c54c3ca0b100fdb11b895 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.1E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS17885 36f9e9b80b4c474e9e70c51d8a240479 307 Pfam PF00892 EamA-like transporter family 9 140 9.3E-24 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS17885 36f9e9b80b4c474e9e70c51d8a240479 307 Pfam PF00892 EamA-like transporter family 154 285 1.2E-26 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS17885 36f9e9b80b4c474e9e70c51d8a240479 307 SUPERFAMILY SSF103481 47 145 2.48E-17 T 29-03-2018 CHH28_RS17885 36f9e9b80b4c474e9e70c51d8a240479 307 SUPERFAMILY SSF103481 189 287 1.22E-19 T 29-03-2018 CHH28_RS17230 724c433e80397514820237656f8d9337 87 Gene3D G3DSA:1.10.1660.10 2 46 2.2E-6 T 29-03-2018 CHH28_RS17230 724c433e80397514820237656f8d9337 87 Pfam PF12728 Helix-turn-helix domain 7 57 1.7E-8 T 29-03-2018 CHH28_RS17230 724c433e80397514820237656f8d9337 87 SUPERFAMILY SSF46955 7 58 4.4E-8 T 29-03-2018 IPR009061 Putative DNA-binding domain CHH28_RS17230 724c433e80397514820237656f8d9337 87 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 46 3.7E-8 T 29-03-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 CHH28_RS01040 db427ecc55977c7ac6ceb4aa9e61116a 165 SUPERFAMILY SSF51182 4 158 8.89E-50 T 29-03-2018 IPR011051 RmlC-like cupin domain CHH28_RS01040 db427ecc55977c7ac6ceb4aa9e61116a 165 PIRSF PIRSF017306 3 154 1.2E-35 T 29-03-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 CHH28_RS01040 db427ecc55977c7ac6ceb4aa9e61116a 165 Gene3D G3DSA:2.60.120.480 3 164 4.7E-44 T 29-03-2018 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 CHH28_RS01040 db427ecc55977c7ac6ceb4aa9e61116a 165 Pfam PF04115 Ureidoglycolate lyase 3 158 6.3E-44 T 29-03-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 CHH28_RS04795 beb11afecc80bf657e74d51ceeb9276e 455 Gene3D G3DSA:2.160.10.10 243 318 9.5E-18 T 29-03-2018 CHH28_RS04795 beb11afecc80bf657e74d51ceeb9276e 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 264 298 5.3E-6 T 29-03-2018 IPR001451 Hexapeptide repeat CHH28_RS04795 beb11afecc80bf657e74d51ceeb9276e 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 351 380 0.0024 T 29-03-2018 IPR001451 Hexapeptide repeat CHH28_RS04795 beb11afecc80bf657e74d51ceeb9276e 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 318 349 0.0022 T 29-03-2018 IPR001451 Hexapeptide repeat CHH28_RS04795 beb11afecc80bf657e74d51ceeb9276e 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 393 427 3.1E-8 T 29-03-2018 IPR001451 Hexapeptide repeat CHH28_RS04795 beb11afecc80bf657e74d51ceeb9276e 455 SUPERFAMILY SSF51161 252 435 5.86E-52 T 29-03-2018 IPR011004 Trimeric LpxA-like CHH28_RS04795 beb11afecc80bf657e74d51ceeb9276e 455 Gene3D G3DSA:3.90.550.10 2 242 1.3E-56 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS04795 beb11afecc80bf657e74d51ceeb9276e 455 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 450 43.415 T 29-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 CHH28_RS04795 beb11afecc80bf657e74d51ceeb9276e 455 SUPERFAMILY SSF53448 2 249 1.81E-65 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS04795 beb11afecc80bf657e74d51ceeb9276e 455 Gene3D G3DSA:2.160.10.10 319 438 8.7E-34 T 29-03-2018 CHH28_RS04795 beb11afecc80bf657e74d51ceeb9276e 455 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 401 429 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CHH28_RS04795 beb11afecc80bf657e74d51ceeb9276e 455 Pfam PF12804 MobA-like NTP transferase domain 6 126 5.1E-24 T 29-03-2018 IPR025877 MobA-like NTP transferase CHH28_RS04795 beb11afecc80bf657e74d51ceeb9276e 455 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 1.2E-197 T 29-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 CHH28_RS04535 b0fc02d8ef93a8922383db8552c0dfd2 173 Hamap MF_00163 Peptide deformylase [def]. 2 163 30.698 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS04535 b0fc02d8ef93a8922383db8552c0dfd2 173 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.6E-54 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS04535 b0fc02d8ef93a8922383db8552c0dfd2 173 Pfam PF01327 Polypeptide deformylase 4 153 9.0E-51 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS04535 b0fc02d8ef93a8922383db8552c0dfd2 173 SUPERFAMILY SSF56420 2 165 2.88E-61 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS04535 b0fc02d8ef93a8922383db8552c0dfd2 173 Gene3D G3DSA:3.90.45.10 1 172 1.9E-60 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS04535 b0fc02d8ef93a8922383db8552c0dfd2 173 PIRSF PIRSF004749 1 172 1.9E-54 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS04535 b0fc02d8ef93a8922383db8552c0dfd2 173 PRINTS PR01576 Peptide deformylase signature 102 120 6.6E-36 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS04535 b0fc02d8ef93a8922383db8552c0dfd2 173 PRINTS PR01576 Peptide deformylase signature 33 62 6.6E-36 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS04535 b0fc02d8ef93a8922383db8552c0dfd2 173 PRINTS PR01576 Peptide deformylase signature 90 101 6.6E-36 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS04535 b0fc02d8ef93a8922383db8552c0dfd2 173 PRINTS PR01576 Peptide deformylase signature 121 150 6.6E-36 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS18085 d7c7175ad1d066b49b834b3692d72618 189 SUPERFAMILY SSF53271 2 163 3.55E-27 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CHH28_RS18085 d7c7175ad1d066b49b834b3692d72618 189 Gene3D G3DSA:3.40.50.2020 1 168 2.0E-19 T 29-03-2018 CHH28_RS18085 d7c7175ad1d066b49b834b3692d72618 189 Pfam PF00156 Phosphoribosyl transferase domain 9 155 5.4E-13 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CHH28_RS14995 e462ebf6bc25cbe1606dba5ce8a0cbce 310 Pfam PF03412 Peptidase C39 family 57 192 2.6E-18 T 29-03-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CHH28_RS14995 e462ebf6bc25cbe1606dba5ce8a0cbce 310 Gene3D G3DSA:3.90.70.10 56 202 2.0E-28 T 29-03-2018 CHH28_RS10760 d32cd71eabe75e4360c79961fbe4ea92 445 Gene3D G3DSA:3.40.720.10 39 440 3.2E-6 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CHH28_RS10760 d32cd71eabe75e4360c79961fbe4ea92 445 Pfam PF07394 Protein of unknown function (DUF1501) 44 423 9.5E-50 T 29-03-2018 IPR010869 Protein of unknown function DUF1501 CHH28_RS08440 d0ea35ab41e3d0fe55d22819fe07a268 143 Pfam PF00572 Ribosomal protein L13 15 138 2.7E-58 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CHH28_RS08440 d0ea35ab41e3d0fe55d22819fe07a268 143 Gene3D G3DSA:3.90.1180.10 1 143 1.0E-62 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CHH28_RS08440 d0ea35ab41e3d0fe55d22819fe07a268 143 PIRSF PIRSF002181 1 142 3.9E-52 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CHH28_RS08440 d0ea35ab41e3d0fe55d22819fe07a268 143 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 29-03-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 CHH28_RS08440 d0ea35ab41e3d0fe55d22819fe07a268 143 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 140 9.8E-65 T 29-03-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS08440 d0ea35ab41e3d0fe55d22819fe07a268 143 SUPERFAMILY SSF52161 1 139 1.06E-60 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CHH28_RS08440 d0ea35ab41e3d0fe55d22819fe07a268 143 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 143 29.448 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CHH28_RS05230 4f072f429053d6953c477e8b7729152a 289 Pfam PF04542 Sigma-70 region 2 54 123 9.7E-17 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS05230 4f072f429053d6953c477e8b7729152a 289 PRINTS PR00046 Major sigma-70 factor signature 78 91 8.3E-18 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS05230 4f072f429053d6953c477e8b7729152a 289 PRINTS PR00046 Major sigma-70 factor signature 233 245 8.3E-18 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS05230 4f072f429053d6953c477e8b7729152a 289 PRINTS PR00046 Major sigma-70 factor signature 252 267 8.3E-18 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS05230 4f072f429053d6953c477e8b7729152a 289 PRINTS PR00046 Major sigma-70 factor signature 267 278 8.3E-18 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS05230 4f072f429053d6953c477e8b7729152a 289 Gene3D G3DSA:1.10.601.10 9 123 2.5E-32 T 29-03-2018 CHH28_RS05230 4f072f429053d6953c477e8b7729152a 289 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 16 282 1.2E-124 T 29-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CHH28_RS05230 4f072f429053d6953c477e8b7729152a 289 SUPERFAMILY SSF88659 190 282 3.92E-19 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS05230 4f072f429053d6953c477e8b7729152a 289 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS05230 4f072f429053d6953c477e8b7729152a 289 Pfam PF00140 Sigma-70 factor, region 1.2 17 41 5.6E-5 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS05230 4f072f429053d6953c477e8b7729152a 289 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS05230 4f072f429053d6953c477e8b7729152a 289 SUPERFAMILY SSF88946 14 123 4.58E-39 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS05230 4f072f429053d6953c477e8b7729152a 289 Pfam PF04545 Sigma-70, region 4 229 279 3.9E-16 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS05230 4f072f429053d6953c477e8b7729152a 289 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 52.467 T 29-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CHH28_RS05230 4f072f429053d6953c477e8b7729152a 289 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 281 7.9E-35 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS05230 4f072f429053d6953c477e8b7729152a 289 Gene3D G3DSA:1.10.10.10 223 286 4.4E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS19430 f2c4ce6384f6afefbaf6452c22626e8d 268 PIRSF PIRSF000388 1 268 6.1E-97 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CHH28_RS19430 f2c4ce6384f6afefbaf6452c22626e8d 268 SUPERFAMILY SSF51621 4 267 1.49E-100 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CHH28_RS19430 f2c4ce6384f6afefbaf6452c22626e8d 268 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 267 41.318 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CHH28_RS19430 f2c4ce6384f6afefbaf6452c22626e8d 268 Gene3D G3DSA:3.20.20.60 1 267 8.7E-82 T 29-03-2018 CHH28_RS19430 f2c4ce6384f6afefbaf6452c22626e8d 268 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 3 267 6.0E-101 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CHH28_RS19430 f2c4ce6384f6afefbaf6452c22626e8d 268 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 262 2.2E-104 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CHH28_RS14885 51b1850ac8e5ba90d81c8b0883d2318e 313 Gene3D G3DSA:3.30.70.250 145 182 4.8E-22 T 29-03-2018 CHH28_RS14885 51b1850ac8e5ba90d81c8b0883d2318e 313 Pfam PF00698 Acyl transferase domain 8 264 2.9E-28 T 29-03-2018 IPR014043 Acyl transferase CHH28_RS14885 51b1850ac8e5ba90d81c8b0883d2318e 313 PIRSF PIRSF000446 1 310 8.1E-100 T 29-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CHH28_RS14885 51b1850ac8e5ba90d81c8b0883d2318e 313 Gene3D G3DSA:3.40.366.10 183 308 1.4E-22 T 29-03-2018 CHH28_RS14885 51b1850ac8e5ba90d81c8b0883d2318e 313 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 6 289 2.4E-102 T 29-03-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CHH28_RS14885 51b1850ac8e5ba90d81c8b0883d2318e 313 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 308 4.4E-26 T 29-03-2018 IPR020801 Polyketide synthase, acyl transferase domain CHH28_RS14885 51b1850ac8e5ba90d81c8b0883d2318e 313 SUPERFAMILY SSF52151 7 123 1.83E-62 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CHH28_RS14885 51b1850ac8e5ba90d81c8b0883d2318e 313 SUPERFAMILY SSF52151 191 308 1.83E-62 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CHH28_RS14885 51b1850ac8e5ba90d81c8b0883d2318e 313 SUPERFAMILY SSF55048 129 198 2.49E-17 T 29-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CHH28_RS14885 51b1850ac8e5ba90d81c8b0883d2318e 313 Gene3D G3DSA:3.40.366.10 4 144 6.5E-38 T 29-03-2018 CHH28_RS16015 c64ec38713ce8e260b40533937960644 395 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS16015 c64ec38713ce8e260b40533937960644 395 Pfam PF00005 ABC transporter 46 194 2.4E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS16015 c64ec38713ce8e260b40533937960644 395 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 39 392 5.1E-127 T 29-03-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 CHH28_RS16015 c64ec38713ce8e260b40533937960644 395 SUPERFAMILY SSF54631 277 392 1.93E-11 T 29-03-2018 CHH28_RS16015 c64ec38713ce8e260b40533937960644 395 SUPERFAMILY SSF52540 40 266 8.87E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS16015 c64ec38713ce8e260b40533937960644 395 Pfam PF00571 CBS domain 347 392 9.7E-4 T 29-03-2018 IPR000644 CBS domain CHH28_RS16015 c64ec38713ce8e260b40533937960644 395 Gene3D G3DSA:3.10.580.10 290 395 6.9E-10 T 29-03-2018 CHH28_RS16015 c64ec38713ce8e260b40533937960644 395 Gene3D G3DSA:3.40.50.300 2 289 2.5E-69 T 29-03-2018 CHH28_RS16015 c64ec38713ce8e260b40533937960644 395 SMART SM00382 55 244 5.8E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS01500 68d47aa96b57e8f9f398d9c6c5497789 176 Gene3D G3DSA:1.10.1740.10 1 78 1.7E-11 T 29-03-2018 CHH28_RS01500 68d47aa96b57e8f9f398d9c6c5497789 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 1 170 1.7E-24 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01500 68d47aa96b57e8f9f398d9c6c5497789 176 Pfam PF04542 Sigma-70 region 2 4 74 9.7E-7 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01500 68d47aa96b57e8f9f398d9c6c5497789 176 SUPERFAMILY SSF88659 84 173 7.85E-16 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01500 68d47aa96b57e8f9f398d9c6c5497789 176 SUPERFAMILY SSF88946 2 87 1.14E-11 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01500 68d47aa96b57e8f9f398d9c6c5497789 176 Pfam PF08281 Sigma-70, region 4 118 167 1.1E-17 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01500 68d47aa96b57e8f9f398d9c6c5497789 176 Gene3D G3DSA:1.10.10.10 79 174 6.0E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS15415 dfd81446a5a1943d4e494f34beefa227 164 Gene3D G3DSA:2.40.100.10 1 164 3.1E-49 T 29-03-2018 IPR029000 Cyclophilin-like domain CHH28_RS15415 dfd81446a5a1943d4e494f34beefa227 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 8.8E-13 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CHH28_RS15415 dfd81446a5a1943d4e494f34beefa227 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 8.8E-13 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CHH28_RS15415 dfd81446a5a1943d4e494f34beefa227 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 8.8E-13 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CHH28_RS15415 dfd81446a5a1943d4e494f34beefa227 164 PIRSF PIRSF001467 1 164 8.0E-27 T 29-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CHH28_RS15415 dfd81446a5a1943d4e494f34beefa227 164 SUPERFAMILY SSF50891 2 163 8.91E-59 T 29-03-2018 IPR029000 Cyclophilin-like domain CHH28_RS15415 dfd81446a5a1943d4e494f34beefa227 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 2.0E-47 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CHH28_RS15415 dfd81446a5a1943d4e494f34beefa227 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 29-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CHH28_RS04450 0a15d230dd40500f6f501c29e844e353 187 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 3 150 3.1E-32 T 29-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CHH28_RS04450 0a15d230dd40500f6f501c29e844e353 187 PIRSF PIRSF004682 1 185 3.1E-51 T 29-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CHH28_RS04450 0a15d230dd40500f6f501c29e844e353 187 SUPERFAMILY SSF56784 1 181 7.86E-43 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS04450 0a15d230dd40500f6f501c29e844e353 187 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 147 5.7E-43 T 29-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CHH28_RS04450 0a15d230dd40500f6f501c29e844e353 187 Pfam PF13242 HAD-hyrolase-like 100 175 1.8E-12 T 29-03-2018 CHH28_RS04450 0a15d230dd40500f6f501c29e844e353 187 Gene3D G3DSA:3.40.50.1000 2 186 9.6E-30 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS06460 612b9f2a57ac8008a7a0110aeb6cf78c 170 Pfam PF00583 Acetyltransferase (GNAT) family 63 140 2.0E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS06460 612b9f2a57ac8008a7a0110aeb6cf78c 170 Gene3D G3DSA:3.40.630.30 2 161 1.9E-21 T 29-03-2018 CHH28_RS06460 612b9f2a57ac8008a7a0110aeb6cf78c 170 SUPERFAMILY SSF55729 7 141 1.22E-22 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS02530 793807b5c3f41088bc6f5b8e5e4043aa 1692 PIRSF PIRSF038980 9 1692 0.0 T 29-03-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria CHH28_RS02530 793807b5c3f41088bc6f5b8e5e4043aa 1692 Gene3D G3DSA:2.60.40.10 419 527 0.02 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS02530 793807b5c3f41088bc6f5b8e5e4043aa 1692 Pfam PF01835 MG2 domain 430 523 3.3E-16 T 29-03-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 CHH28_RS02530 793807b5c3f41088bc6f5b8e5e4043aa 1692 Pfam PF00207 Alpha-2-macroglobulin family 1007 1093 7.3E-11 T 29-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 CHH28_RS02530 793807b5c3f41088bc6f5b8e5e4043aa 1692 SMART SM01360 1007 1094 1.8E-22 T 29-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 CHH28_RS02530 793807b5c3f41088bc6f5b8e5e4043aa 1692 Pfam PF07007 Lysozyme inhibitor LprI 24 96 9.7E-5 T 29-03-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal CHH28_RS02530 793807b5c3f41088bc6f5b8e5e4043aa 1692 SUPERFAMILY SSF48239 1207 1470 4.71E-31 T 29-03-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CHH28_RS02530 793807b5c3f41088bc6f5b8e5e4043aa 1692 Gene3D G3DSA:1.50.10.20 1203 1480 1.1E-20 T 29-03-2018 CHH28_RS02530 793807b5c3f41088bc6f5b8e5e4043aa 1692 SMART SM01359 793 939 2.9E-21 T 29-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CHH28_RS02530 793807b5c3f41088bc6f5b8e5e4043aa 1692 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1209 1229 1.4E-6 T 29-03-2018 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming CHH28_RS02530 793807b5c3f41088bc6f5b8e5e4043aa 1692 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 793 939 7.0E-11 T 29-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CHH28_RS02530 793807b5c3f41088bc6f5b8e5e4043aa 1692 Gene3D G3DSA:2.60.40.10 1057 1155 5.2E-9 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS02530 793807b5c3f41088bc6f5b8e5e4043aa 1692 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 331 419 7.1E-12 T 29-03-2018 CHH28_RS16960 2dfe21b31a948ce807d6f609231bdd7c 301 Gene3D G3DSA:3.40.50.2300 18 218 5.2E-33 T 29-03-2018 CHH28_RS16960 2dfe21b31a948ce807d6f609231bdd7c 301 SMART SM00448 25 138 3.7E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS16960 2dfe21b31a948ce807d6f609231bdd7c 301 SUPERFAMILY SSF52172 25 141 2.28E-32 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS16960 2dfe21b31a948ce807d6f609231bdd7c 301 Pfam PF00072 Response regulator receiver domain 28 136 1.2E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS16590 0a39d03c7e85309f65044a5e13b47760 432 Pfam PF02803 Thiolase, C-terminal domain 303 431 3.2E-30 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CHH28_RS16590 0a39d03c7e85309f65044a5e13b47760 432 SUPERFAMILY SSF53901 309 431 1.2E-27 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS16590 0a39d03c7e85309f65044a5e13b47760 432 Gene3D G3DSA:3.40.47.10 1 279 5.6E-42 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS16590 0a39d03c7e85309f65044a5e13b47760 432 Pfam PF00108 Thiolase, N-terminal domain 8 276 1.0E-48 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CHH28_RS16590 0a39d03c7e85309f65044a5e13b47760 432 PIRSF PIRSF000429 2 432 2.0E-104 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CHH28_RS16590 0a39d03c7e85309f65044a5e13b47760 432 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 430 2.0E-113 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CHH28_RS16590 0a39d03c7e85309f65044a5e13b47760 432 SUPERFAMILY SSF53901 8 283 5.04E-57 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS16590 0a39d03c7e85309f65044a5e13b47760 432 Gene3D G3DSA:3.40.47.10 280 429 1.1E-24 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS19455 6c58e458a72802be04845c9e675b1463 336 Pfam PF01008 Initiation factor 2 subunit family 47 323 2.6E-73 T 29-03-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 CHH28_RS19455 6c58e458a72802be04845c9e675b1463 336 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 4 334 39.652 T 29-03-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CHH28_RS19455 6c58e458a72802be04845c9e675b1463 336 Gene3D G3DSA:1.20.120.420 1 124 1.1E-43 T 29-03-2018 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 CHH28_RS19455 6c58e458a72802be04845c9e675b1463 336 Gene3D G3DSA:3.40.50.10470 125 336 5.2E-68 T 29-03-2018 CHH28_RS19455 6c58e458a72802be04845c9e675b1463 336 SUPERFAMILY SSF100950 3 327 6.7E-111 T 29-03-2018 CHH28_RS19455 6c58e458a72802be04845c9e675b1463 336 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 6 322 6.6E-130 T 29-03-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CHH28_RS19455 6c58e458a72802be04845c9e675b1463 336 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 33 323 1.2E-106 T 29-03-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CHH28_RS15640 6baeff58638cd915a85eb52588dd3638 590 PIRSF PIRSF000171 1 580 2.2E-48 T 29-03-2018 CHH28_RS15640 6baeff58638cd915a85eb52588dd3638 590 SUPERFAMILY SSF46977 455 590 1.44E-45 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS15640 6baeff58638cd915a85eb52588dd3638 590 Gene3D G3DSA:3.50.50.60 310 423 6.6E-17 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS15640 6baeff58638cd915a85eb52588dd3638 590 Gene3D G3DSA:4.10.80.40 543 590 1.1E-13 T 29-03-2018 CHH28_RS15640 6baeff58638cd915a85eb52588dd3638 590 SUPERFAMILY SSF56425 239 358 8.97E-42 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS15640 6baeff58638cd915a85eb52588dd3638 590 Pfam PF02910 Fumarate reductase flavoprotein C-term 462 590 1.2E-35 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS15640 6baeff58638cd915a85eb52588dd3638 590 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 8 590 4.1E-286 T 29-03-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS15640 6baeff58638cd915a85eb52588dd3638 590 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 44 53 - T 29-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS15640 6baeff58638cd915a85eb52588dd3638 590 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 10 590 1.1E-245 T 29-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS15640 6baeff58638cd915a85eb52588dd3638 590 Gene3D G3DSA:1.20.58.100 433 542 3.8E-33 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS15640 6baeff58638cd915a85eb52588dd3638 590 SUPERFAMILY SSF51905 361 426 1.55E-73 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS15640 6baeff58638cd915a85eb52588dd3638 590 SUPERFAMILY SSF51905 5 262 1.55E-73 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS15640 6baeff58638cd915a85eb52588dd3638 590 Pfam PF00890 FAD binding domain 10 407 4.0E-118 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS15640 6baeff58638cd915a85eb52588dd3638 590 Gene3D G3DSA:3.50.50.60 3 309 7.5E-47 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS02035 b4e5fa20fe9f503ebc6deb8a8640f1da 562 SMART SM00304 231 285 4.9E-16 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS02035 b4e5fa20fe9f503ebc6deb8a8640f1da 562 SMART SM00283 300 561 5.2E-73 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS02035 b4e5fa20fe9f503ebc6deb8a8640f1da 562 Pfam PF17200 Single Cache domain 2 49 197 1.0E-40 T 29-03-2018 IPR033480 Single Cache domain 2 CHH28_RS02035 b4e5fa20fe9f503ebc6deb8a8640f1da 562 SUPERFAMILY SSF58104 253 561 9.29E-78 T 29-03-2018 CHH28_RS02035 b4e5fa20fe9f503ebc6deb8a8640f1da 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 425 3.0E-21 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS02035 b4e5fa20fe9f503ebc6deb8a8640f1da 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 208 228 3.0E-21 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS02035 b4e5fa20fe9f503ebc6deb8a8640f1da 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 427 456 3.0E-21 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS02035 b4e5fa20fe9f503ebc6deb8a8640f1da 562 Gene3D G3DSA:3.30.450.20 28 211 4.3E-47 T 29-03-2018 CHH28_RS02035 b4e5fa20fe9f503ebc6deb8a8640f1da 562 Pfam PF00672 HAMP domain 231 281 2.9E-12 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS02035 b4e5fa20fe9f503ebc6deb8a8640f1da 562 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 372 526 4.4E-41 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS02035 b4e5fa20fe9f503ebc6deb8a8640f1da 562 SMART SM01049 45 137 1.8E-27 T 29-03-2018 IPR033480 Single Cache domain 2 CHH28_RS02035 b4e5fa20fe9f503ebc6deb8a8640f1da 562 Gene3D G3DSA:1.10.287.950 251 340 3.8E-8 T 29-03-2018 CHH28_RS02035 b4e5fa20fe9f503ebc6deb8a8640f1da 562 Gene3D G3DSA:1.10.287.950 341 562 1.2E-49 T 29-03-2018 CHH28_RS16490 12ff3247a8cd70210a0e520af622911d 268 Pfam PF02311 AraC-like ligand binding domain 14 128 5.1E-20 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CHH28_RS16490 12ff3247a8cd70210a0e520af622911d 268 Gene3D G3DSA:2.60.120.10 22 224 1.3E-16 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS16490 12ff3247a8cd70210a0e520af622911d 268 Pfam PF12833 Helix-turn-helix domain 192 265 7.9E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS16490 12ff3247a8cd70210a0e520af622911d 268 Gene3D G3DSA:1.10.10.60 225 268 4.3E-12 T 29-03-2018 CHH28_RS16490 12ff3247a8cd70210a0e520af622911d 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 234 249 6.6E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS16490 12ff3247a8cd70210a0e520af622911d 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 265 6.6E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS16490 12ff3247a8cd70210a0e520af622911d 268 SUPERFAMILY SSF46689 169 216 8.06E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS16490 12ff3247a8cd70210a0e520af622911d 268 SMART SM00342 183 265 2.6E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS16490 12ff3247a8cd70210a0e520af622911d 268 SUPERFAMILY SSF51215 22 143 3.66E-17 T 29-03-2018 CHH28_RS16490 12ff3247a8cd70210a0e520af622911d 268 SUPERFAMILY SSF46689 220 265 1.43E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS11435 af5f86bb05c2afaddd900a5c6ad5efc3 897 Pfam PF01966 HD domain 464 592 1.1E-8 T 29-03-2018 IPR006674 HD domain CHH28_RS11435 af5f86bb05c2afaddd900a5c6ad5efc3 897 SUPERFAMILY SSF55021 705 775 5.34E-6 T 29-03-2018 CHH28_RS11435 af5f86bb05c2afaddd900a5c6ad5efc3 897 SUPERFAMILY SSF109604 432 621 1.44E-11 T 29-03-2018 CHH28_RS11435 af5f86bb05c2afaddd900a5c6ad5efc3 897 Gene3D G3DSA:3.30.460.10 50 180 5.1E-24 T 29-03-2018 CHH28_RS11435 af5f86bb05c2afaddd900a5c6ad5efc3 897 Pfam PF01842 ACT domain 817 867 9.2E-9 T 29-03-2018 IPR002912 ACT domain CHH28_RS11435 af5f86bb05c2afaddd900a5c6ad5efc3 897 Pfam PF08335 GlnD PII-uridylyltransferase 187 324 2.0E-32 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CHH28_RS11435 af5f86bb05c2afaddd900a5c6ad5efc3 897 Pfam PF01909 Nucleotidyltransferase domain 81 132 4.2E-5 T 29-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CHH28_RS11435 af5f86bb05c2afaddd900a5c6ad5efc3 897 SUPERFAMILY SSF81301 22 179 1.67E-25 T 29-03-2018 CHH28_RS11435 af5f86bb05c2afaddd900a5c6ad5efc3 897 SMART SM00471 459 606 1.8E-9 T 29-03-2018 IPR003607 HD/PDEase domain CHH28_RS11435 af5f86bb05c2afaddd900a5c6ad5efc3 897 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 897 272.516 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CHH28_RS11435 af5f86bb05c2afaddd900a5c6ad5efc3 897 Gene3D G3DSA:3.30.70.260 697 794 2.8E-7 T 29-03-2018 CHH28_RS11435 af5f86bb05c2afaddd900a5c6ad5efc3 897 SUPERFAMILY SSF55021 814 880 1.45E-10 T 29-03-2018 CHH28_RS11435 af5f86bb05c2afaddd900a5c6ad5efc3 897 PIRSF PIRSF006288 19 895 3.2E-277 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CHH28_RS11435 af5f86bb05c2afaddd900a5c6ad5efc3 897 Gene3D G3DSA:1.10.3090.10 353 660 7.4E-31 T 29-03-2018 CHH28_RS11435 af5f86bb05c2afaddd900a5c6ad5efc3 897 SUPERFAMILY SSF81593 196 314 2.12E-9 T 29-03-2018 CHH28_RS11435 af5f86bb05c2afaddd900a5c6ad5efc3 897 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 48 887 1.3E-258 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CHH28_RS11435 af5f86bb05c2afaddd900a5c6ad5efc3 897 Gene3D G3DSA:1.20.120.330 185 328 9.4E-24 T 29-03-2018 CHH28_RS11435 af5f86bb05c2afaddd900a5c6ad5efc3 897 Gene3D G3DSA:3.30.70.260 812 897 2.5E-12 T 29-03-2018 CHH28_RS11735 24cc58f66a5af6ede3089a0fd9c0cabf 649 Gene3D G3DSA:2.40.50.140 567 649 1.5E-5 T 29-03-2018 CHH28_RS11735 24cc58f66a5af6ede3089a0fd9c0cabf 649 ProSitePatterns PS01175 Ribonuclease II family signature. 494 518 - T 29-03-2018 IPR022966 Ribonuclease II/R, conserved site CHH28_RS11735 24cc58f66a5af6ede3089a0fd9c0cabf 649 SUPERFAMILY SSF50249 572 647 2.14E-6 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS11735 24cc58f66a5af6ede3089a0fd9c0cabf 649 Pfam PF00575 S1 RNA binding domain 569 646 1.4E-4 T 29-03-2018 IPR003029 S1 domain GO:0003676 CHH28_RS11735 24cc58f66a5af6ede3089a0fd9c0cabf 649 Gene3D G3DSA:2.40.50.140 12 91 4.3E-4 T 29-03-2018 CHH28_RS11735 24cc58f66a5af6ede3089a0fd9c0cabf 649 SUPERFAMILY SSF50249 93 177 3.77E-15 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS11735 24cc58f66a5af6ede3089a0fd9c0cabf 649 SMART SM00357 31 88 5.8E-6 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CHH28_RS11735 24cc58f66a5af6ede3089a0fd9c0cabf 649 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 18 647 1.1E-137 T 29-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CHH28_RS11735 24cc58f66a5af6ede3089a0fd9c0cabf 649 SUPERFAMILY SSF50249 165 565 2.4E-107 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS11735 24cc58f66a5af6ede3089a0fd9c0cabf 649 Pfam PF00773 RNB domain 203 526 5.0E-89 T 29-03-2018 CHH28_RS11735 24cc58f66a5af6ede3089a0fd9c0cabf 649 SMART SM00955 203 527 1.5E-112 T 29-03-2018 CHH28_RS11735 24cc58f66a5af6ede3089a0fd9c0cabf 649 SUPERFAMILY SSF50249 15 88 2.71E-12 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS11735 24cc58f66a5af6ede3089a0fd9c0cabf 649 Pfam PF08206 Ribonuclease B OB domain 32 84 2.3E-8 T 29-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain CHH28_RS09325 c4b9979dc562cb38367aab2d14a736f0 238 Pfam PF00436 Single-strand binding protein family 5 108 2.7E-38 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CHH28_RS09325 c4b9979dc562cb38367aab2d14a736f0 238 PIRSF PIRSF002070 147 197 630.0 T 29-03-2018 CHH28_RS09325 c4b9979dc562cb38367aab2d14a736f0 238 PIRSF PIRSF002070 1 124 4.2E-34 T 29-03-2018 CHH28_RS09325 c4b9979dc562cb38367aab2d14a736f0 238 PIRSF PIRSF002070 187 238 2000.0 T 29-03-2018 CHH28_RS09325 c4b9979dc562cb38367aab2d14a736f0 238 SUPERFAMILY SSF50249 3 110 2.12E-47 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS09325 c4b9979dc562cb38367aab2d14a736f0 238 SUPERFAMILY SSF50249 170 238 2.12E-47 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS09325 c4b9979dc562cb38367aab2d14a736f0 238 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 171 4.1E-48 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CHH28_RS09325 c4b9979dc562cb38367aab2d14a736f0 238 Gene3D G3DSA:2.40.50.140 1 125 9.2E-44 T 29-03-2018 CHH28_RS09325 c4b9979dc562cb38367aab2d14a736f0 238 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 35.013 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CHH28_RS11815 6f3d36e8dbb7c6aded6f0e7f3b971122 1196 Gene3D G3DSA:1.10.10.160 98 206 1.4E-30 T 29-03-2018 CHH28_RS11815 6f3d36e8dbb7c6aded6f0e7f3b971122 1196 PIRSF PIRSF000980 8 1174 0.0 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CHH28_RS11815 6f3d36e8dbb7c6aded6f0e7f3b971122 1196 SUPERFAMILY SSF52540 378 804 3.9E-89 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11815 6f3d36e8dbb7c6aded6f0e7f3b971122 1196 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 9 814 5.4E-274 T 29-03-2018 CHH28_RS11815 6f3d36e8dbb7c6aded6f0e7f3b971122 1196 Gene3D G3DSA:1.10.486.10 457 666 6.8E-65 T 29-03-2018 CHH28_RS11815 6f3d36e8dbb7c6aded6f0e7f3b971122 1196 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 9 1130 0.0 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CHH28_RS11815 6f3d36e8dbb7c6aded6f0e7f3b971122 1196 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 8 1170 19.488 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CHH28_RS11815 6f3d36e8dbb7c6aded6f0e7f3b971122 1196 SUPERFAMILY SSF52980 841 1167 6.97E-42 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CHH28_RS11815 6f3d36e8dbb7c6aded6f0e7f3b971122 1196 SUPERFAMILY SSF52540 8 367 2.23E-94 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS15585 7c8e55a4441b9cfa7ea3f6742612cad2 190 SUPERFAMILY SSF56784 12 166 8.27E-39 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS15585 7c8e55a4441b9cfa7ea3f6742612cad2 190 PIRSF PIRSF006118 2 177 9.6E-60 T 29-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CHH28_RS15585 7c8e55a4441b9cfa7ea3f6742612cad2 190 Gene3D G3DSA:3.40.50.1000 8 185 7.7E-26 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS15585 7c8e55a4441b9cfa7ea3f6742612cad2 190 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 15 164 5.2E-49 T 29-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CHH28_RS15585 7c8e55a4441b9cfa7ea3f6742612cad2 190 Pfam PF08282 haloacid dehalogenase-like hydrolase 77 157 1.1E-7 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS09880 b2fb0a6ed5679ccff8f1a2c4666ce98c 720 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 207 8.3E-37 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CHH28_RS09880 b2fb0a6ed5679ccff8f1a2c4666ce98c 720 Gene3D G3DSA:1.10.1040.10 629 718 8.0E-13 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CHH28_RS09880 b2fb0a6ed5679ccff8f1a2c4666ce98c 720 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 325 503 2.3E-60 T 29-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CHH28_RS09880 b2fb0a6ed5679ccff8f1a2c4666ce98c 720 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 506 603 4.8E-18 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CHH28_RS09880 b2fb0a6ed5679ccff8f1a2c4666ce98c 720 SUPERFAMILY SSF52096 3 304 1.29E-68 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS09880 b2fb0a6ed5679ccff8f1a2c4666ce98c 720 Gene3D G3DSA:3.40.50.720 274 504 4.9E-64 T 29-03-2018 CHH28_RS09880 b2fb0a6ed5679ccff8f1a2c4666ce98c 720 Gene3D G3DSA:3.90.226.10 8 273 9.0E-55 T 29-03-2018 CHH28_RS09880 b2fb0a6ed5679ccff8f1a2c4666ce98c 720 SUPERFAMILY SSF48179 505 620 1.96E-19 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CHH28_RS09880 b2fb0a6ed5679ccff8f1a2c4666ce98c 720 SUPERFAMILY SSF51735 323 504 4.74E-55 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS09880 b2fb0a6ed5679ccff8f1a2c4666ce98c 720 SUPERFAMILY SSF48179 627 720 4.08E-18 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CHH28_RS09880 b2fb0a6ed5679ccff8f1a2c4666ce98c 720 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 108 128 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CHH28_RS09880 b2fb0a6ed5679ccff8f1a2c4666ce98c 720 Gene3D G3DSA:1.10.1040.10 505 608 6.7E-18 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CHH28_RS18850 eddbdf3f915cf2c0aa2df8b4ba2602f7 417 Pfam PF00512 His Kinase A (phospho-acceptor) domain 194 259 8.9E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS18850 eddbdf3f915cf2c0aa2df8b4ba2602f7 417 SUPERFAMILY SSF55874 250 408 9.95E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18850 eddbdf3f915cf2c0aa2df8b4ba2602f7 417 Gene3D G3DSA:3.30.450.20 82 185 2.3E-9 T 29-03-2018 CHH28_RS18850 eddbdf3f915cf2c0aa2df8b4ba2602f7 417 SMART SM00387 302 410 7.8E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18850 eddbdf3f915cf2c0aa2df8b4ba2602f7 417 Gene3D G3DSA:3.30.565.10 262 416 7.1E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18850 eddbdf3f915cf2c0aa2df8b4ba2602f7 417 SUPERFAMILY SSF55785 71 170 7.48E-7 T 29-03-2018 IPR000014 PAS domain CHH28_RS18850 eddbdf3f915cf2c0aa2df8b4ba2602f7 417 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 305 407 4.3E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18850 eddbdf3f915cf2c0aa2df8b4ba2602f7 417 SMART SM00388 194 260 1.4E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS18850 eddbdf3f915cf2c0aa2df8b4ba2602f7 417 Gene3D G3DSA:1.20.120.330 28 81 0.024 T 29-03-2018 CHH28_RS18850 eddbdf3f915cf2c0aa2df8b4ba2602f7 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 407 7.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18850 eddbdf3f915cf2c0aa2df8b4ba2602f7 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 387 7.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18850 eddbdf3f915cf2c0aa2df8b4ba2602f7 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 354 7.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18850 eddbdf3f915cf2c0aa2df8b4ba2602f7 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 368 7.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18850 eddbdf3f915cf2c0aa2df8b4ba2602f7 417 Gene3D G3DSA:1.10.287.130 186 256 1.6E-8 T 29-03-2018 CHH28_RS18850 eddbdf3f915cf2c0aa2df8b4ba2602f7 417 SMART SM00091 83 151 6.2E-4 T 29-03-2018 IPR000014 PAS domain CHH28_RS18850 eddbdf3f915cf2c0aa2df8b4ba2602f7 417 SUPERFAMILY SSF47384 187 259 3.14E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS13680 fbba2452aadaedb04210f9b350b67de8 342 Gene3D G3DSA:3.40.50.2000 171 321 6.7E-33 T 29-03-2018 CHH28_RS13680 fbba2452aadaedb04210f9b350b67de8 342 SUPERFAMILY SSF53756 14 335 8.97E-61 T 29-03-2018 CHH28_RS13680 fbba2452aadaedb04210f9b350b67de8 342 Pfam PF00534 Glycosyl transferases group 1 170 312 1.1E-21 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CHH28_RS13680 fbba2452aadaedb04210f9b350b67de8 342 Pfam PF13579 Glycosyl transferase 4-like domain 18 148 5.9E-12 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CHH28_RS13680 fbba2452aadaedb04210f9b350b67de8 342 Gene3D G3DSA:3.40.50.2000 10 170 1.8E-13 T 29-03-2018 CHH28_RS06200 f30ea3c46aa3ebbe79a2b25cea459550 268 Gene3D G3DSA:1.10.287.70 143 185 1.5E-7 T 29-03-2018 CHH28_RS06200 f30ea3c46aa3ebbe79a2b25cea459550 268 Gene3D G3DSA:1.20.120.350 27 142 4.3E-4 T 29-03-2018 CHH28_RS06200 f30ea3c46aa3ebbe79a2b25cea459550 268 Pfam PF07885 Ion channel 149 222 6.9E-17 T 29-03-2018 IPR013099 Potassium channel domain CHH28_RS06200 f30ea3c46aa3ebbe79a2b25cea459550 268 Gene3D G3DSA:1.20.5.110 187 223 1.3E-11 T 29-03-2018 CHH28_RS06200 f30ea3c46aa3ebbe79a2b25cea459550 268 SUPERFAMILY SSF81324 33 224 1.7E-32 T 29-03-2018 CHH28_RS01270 9aed4f203938fd143339811dc8d6eed9 629 Pfam PF03958 Bacterial type II/III secretion system short domain 265 337 5.6E-16 T 29-03-2018 IPR005644 NolW-like CHH28_RS01270 9aed4f203938fd143339811dc8d6eed9 629 Pfam PF03958 Bacterial type II/III secretion system short domain 185 257 2.7E-15 T 29-03-2018 IPR005644 NolW-like CHH28_RS01270 9aed4f203938fd143339811dc8d6eed9 629 Pfam PF03958 Bacterial type II/III secretion system short domain 121 180 7.7E-9 T 29-03-2018 IPR005644 NolW-like CHH28_RS01270 9aed4f203938fd143339811dc8d6eed9 629 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 26 593 7.7E-161 T 29-03-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 CHH28_RS01270 9aed4f203938fd143339811dc8d6eed9 629 PRINTS PR00811 Bacterial general secretion pathway protein D signature 416 440 5.3E-35 T 29-03-2018 IPR001775 GspD/PilQ family CHH28_RS01270 9aed4f203938fd143339811dc8d6eed9 629 PRINTS PR00811 Bacterial general secretion pathway protein D signature 451 461 5.3E-35 T 29-03-2018 IPR001775 GspD/PilQ family CHH28_RS01270 9aed4f203938fd143339811dc8d6eed9 629 PRINTS PR00811 Bacterial general secretion pathway protein D signature 548 566 5.3E-35 T 29-03-2018 IPR001775 GspD/PilQ family CHH28_RS01270 9aed4f203938fd143339811dc8d6eed9 629 PRINTS PR00811 Bacterial general secretion pathway protein D signature 337 347 5.3E-35 T 29-03-2018 IPR001775 GspD/PilQ family CHH28_RS01270 9aed4f203938fd143339811dc8d6eed9 629 PRINTS PR00811 Bacterial general secretion pathway protein D signature 571 585 5.3E-35 T 29-03-2018 IPR001775 GspD/PilQ family CHH28_RS01270 9aed4f203938fd143339811dc8d6eed9 629 Pfam PF00263 Bacterial type II and III secretion system protein 420 583 1.6E-50 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 CHH28_RS11500 2d049ef2ab0a9c9f6322bb619a402d27 152 Gene3D G3DSA:3.10.129.10 2 149 3.8E-51 T 29-03-2018 CHH28_RS11500 2d049ef2ab0a9c9f6322bb619a402d27 152 PIRSF PIRSF030962 19 143 1.4E-8 T 29-03-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CHH28_RS11500 2d049ef2ab0a9c9f6322bb619a402d27 152 SUPERFAMILY SSF54637 5 145 1.5E-45 T 29-03-2018 IPR029069 HotDog domain CHH28_RS11500 2d049ef2ab0a9c9f6322bb619a402d27 152 Pfam PF07977 FabA-like domain 11 140 2.6E-37 T 29-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CHH28_RS11500 2d049ef2ab0a9c9f6322bb619a402d27 152 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 4 145 5.2E-56 T 29-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CHH28_RS11500 2d049ef2ab0a9c9f6322bb619a402d27 152 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 148 33.298 T 29-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CHH28_RS07735 5f5b97be065ce6aa4c462adc1b8dd3b3 526 SUPERFAMILY SSF47384 283 363 3.73E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS07735 5f5b97be065ce6aa4c462adc1b8dd3b3 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 2.4E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS07735 5f5b97be065ce6aa4c462adc1b8dd3b3 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 2.4E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS07735 5f5b97be065ce6aa4c462adc1b8dd3b3 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 2.4E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS07735 5f5b97be065ce6aa4c462adc1b8dd3b3 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 518 2.4E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS07735 5f5b97be065ce6aa4c462adc1b8dd3b3 526 SUPERFAMILY SSF55874 358 521 1.44E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS07735 5f5b97be065ce6aa4c462adc1b8dd3b3 526 Gene3D G3DSA:3.30.565.10 379 525 2.1E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS07735 5f5b97be065ce6aa4c462adc1b8dd3b3 526 SMART SM00387 406 521 9.8E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS07735 5f5b97be065ce6aa4c462adc1b8dd3b3 526 SMART SM00388 299 364 1.8E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS07735 5f5b97be065ce6aa4c462adc1b8dd3b3 526 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 409 518 5.6E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS07735 5f5b97be065ce6aa4c462adc1b8dd3b3 526 Gene3D G3DSA:1.10.287.130 289 360 2.5E-6 T 29-03-2018 CHH28_RS10160 de9aeb83f1bf37d969d1bf2088910df1 503 PRINTS PR00113 Alkaline phosphatase signature 152 172 3.1E-34 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS10160 de9aeb83f1bf37d969d1bf2088910df1 503 PRINTS PR00113 Alkaline phosphatase signature 105 120 3.1E-34 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS10160 de9aeb83f1bf37d969d1bf2088910df1 503 PRINTS PR00113 Alkaline phosphatase signature 49 69 3.1E-34 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS10160 de9aeb83f1bf37d969d1bf2088910df1 503 PRINTS PR00113 Alkaline phosphatase signature 287 316 3.1E-34 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS10160 de9aeb83f1bf37d969d1bf2088910df1 503 PRINTS PR00113 Alkaline phosphatase signature 214 224 3.1E-34 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS10160 de9aeb83f1bf37d969d1bf2088910df1 503 Pfam PF00245 Alkaline phosphatase 49 495 6.0E-101 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS10160 de9aeb83f1bf37d969d1bf2088910df1 503 SUPERFAMILY SSF53649 27 496 1.14E-125 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CHH28_RS10160 de9aeb83f1bf37d969d1bf2088910df1 503 Gene3D G3DSA:3.40.720.10 20 503 7.7E-127 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CHH28_RS10160 de9aeb83f1bf37d969d1bf2088910df1 503 SMART SM00098 50 497 3.6E-119 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS04400 faa8d78834acf813e662cdd556e69c28 504 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 413 481 3.7E-32 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CHH28_RS04400 faa8d78834acf813e662cdd556e69c28 504 SMART SM00760 412 481 1.1E-44 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CHH28_RS04400 faa8d78834acf813e662cdd556e69c28 504 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 462 481 2.7E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CHH28_RS04400 faa8d78834acf813e662cdd556e69c28 504 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 202 222 2.7E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CHH28_RS04400 faa8d78834acf813e662cdd556e69c28 504 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 266 280 2.7E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CHH28_RS04400 faa8d78834acf813e662cdd556e69c28 504 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 234 248 2.7E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CHH28_RS04400 faa8d78834acf813e662cdd556e69c28 504 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 300 327 2.7E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CHH28_RS04400 faa8d78834acf813e662cdd556e69c28 504 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 2 503 34.133 T 29-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CHH28_RS04400 faa8d78834acf813e662cdd556e69c28 504 Pfam PF11638 DnaA N-terminal domain 3 63 6.2E-22 T 29-03-2018 IPR024633 DnaA N-terminal domain CHH28_RS04400 faa8d78834acf813e662cdd556e69c28 504 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 502 2.2E-188 T 29-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CHH28_RS04400 faa8d78834acf813e662cdd556e69c28 504 Pfam PF00308 Bacterial dnaA protein 169 386 1.0E-98 T 29-03-2018 IPR013317 Chromosomal replication initiator protein DnaA CHH28_RS04400 faa8d78834acf813e662cdd556e69c28 504 SUPERFAMILY SSF48295 400 502 7.32E-37 T 29-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CHH28_RS04400 faa8d78834acf813e662cdd556e69c28 504 SUPERFAMILY SSF52540 170 381 1.6E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS04400 faa8d78834acf813e662cdd556e69c28 504 SMART SM00382 201 406 9.2E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS04400 faa8d78834acf813e662cdd556e69c28 504 Gene3D G3DSA:1.10.8.60 335 406 3.8E-28 T 29-03-2018 CHH28_RS04400 faa8d78834acf813e662cdd556e69c28 504 Gene3D G3DSA:3.40.50.300 166 333 1.5E-20 T 29-03-2018 CHH28_RS04400 faa8d78834acf813e662cdd556e69c28 504 Gene3D G3DSA:1.10.1750.10 407 503 3.1E-35 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CHH28_RS04400 faa8d78834acf813e662cdd556e69c28 504 ProSitePatterns PS01008 DnaA protein signature. 462 481 - T 29-03-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CHH28_RS10000 d03588875a7b2ee1cf223fe2023da6b5 475 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 307 335 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CHH28_RS10000 d03588875a7b2ee1cf223fe2023da6b5 475 SUPERFAMILY SSF53955 243 394 2.04E-38 T 29-03-2018 IPR023346 Lysozyme-like domain CHH28_RS10000 d03588875a7b2ee1cf223fe2023da6b5 475 SUPERFAMILY SSF53955 429 447 2.04E-38 T 29-03-2018 IPR023346 Lysozyme-like domain CHH28_RS10000 d03588875a7b2ee1cf223fe2023da6b5 475 SUPERFAMILY SSF53850 40 263 5.07E-41 T 29-03-2018 CHH28_RS10000 d03588875a7b2ee1cf223fe2023da6b5 475 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 263 1.3E-33 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS10000 d03588875a7b2ee1cf223fe2023da6b5 475 Gene3D G3DSA:3.40.190.10 28 187 1.1E-28 T 29-03-2018 CHH28_RS10000 d03588875a7b2ee1cf223fe2023da6b5 475 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 2 472 45.965 T 29-03-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 CHH28_RS10000 d03588875a7b2ee1cf223fe2023da6b5 475 Pfam PF01464 Transglycosylase SLT domain 290 396 3.0E-22 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CHH28_RS10000 d03588875a7b2ee1cf223fe2023da6b5 475 SMART SM00062 39 264 7.6E-33 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS10000 d03588875a7b2ee1cf223fe2023da6b5 475 Gene3D G3DSA:1.10.530.10 268 447 3.4E-39 T 29-03-2018 CHH28_RS10000 d03588875a7b2ee1cf223fe2023da6b5 475 Gene3D G3DSA:3.40.190.10 188 266 0.052 T 29-03-2018 CHH28_RS14030 4d09c81ca3265ff772d0b8d8c5b1bfba 428 SMART SM00382 114 335 1.7E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS14030 4d09c81ca3265ff772d0b8d8c5b1bfba 428 SUPERFAMILY SSF52540 64 404 1.83E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS14030 4d09c81ca3265ff772d0b8d8c5b1bfba 428 Gene3D G3DSA:1.10.8.60 319 411 1.7E-33 T 29-03-2018 CHH28_RS14030 4d09c81ca3265ff772d0b8d8c5b1bfba 428 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 14 413 3.6E-206 T 29-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CHH28_RS14030 4d09c81ca3265ff772d0b8d8c5b1bfba 428 Gene3D G3DSA:3.40.50.300 59 317 9.0E-71 T 29-03-2018 CHH28_RS14030 4d09c81ca3265ff772d0b8d8c5b1bfba 428 SUPERFAMILY SSF57716 16 51 1.15E-11 T 29-03-2018 CHH28_RS14030 4d09c81ca3265ff772d0b8d8c5b1bfba 428 SMART SM00994 15 54 2.5E-24 T 29-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CHH28_RS14030 4d09c81ca3265ff772d0b8d8c5b1bfba 428 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 53.254 T 29-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CHH28_RS14030 4d09c81ca3265ff772d0b8d8c5b1bfba 428 SMART SM01086 319 414 1.5E-33 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CHH28_RS14030 4d09c81ca3265ff772d0b8d8c5b1bfba 428 Pfam PF06689 ClpX C4-type zinc finger 16 53 3.9E-20 T 29-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CHH28_RS14030 4d09c81ca3265ff772d0b8d8c5b1bfba 428 Pfam PF07724 AAA domain (Cdc48 subfamily) 115 312 3.8E-48 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CHH28_RS14030 4d09c81ca3265ff772d0b8d8c5b1bfba 428 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 2.4E-15 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CHH28_RS09780 8ff4fc6f6ffba269cbb7cca4b05371ef 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 96 111 - T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS09780 8ff4fc6f6ffba269cbb7cca4b05371ef 458 Pfam PF01235 Sodium:alanine symporter family 61 456 2.4E-150 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS09780 8ff4fc6f6ffba269cbb7cca4b05371ef 458 PRINTS PR00175 Sodium/alanine symporter signature 312 330 2.2E-56 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS09780 8ff4fc6f6ffba269cbb7cca4b05371ef 458 PRINTS PR00175 Sodium/alanine symporter signature 356 378 2.2E-56 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS09780 8ff4fc6f6ffba269cbb7cca4b05371ef 458 PRINTS PR00175 Sodium/alanine symporter signature 96 118 2.2E-56 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS09780 8ff4fc6f6ffba269cbb7cca4b05371ef 458 PRINTS PR00175 Sodium/alanine symporter signature 189 207 2.2E-56 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS09780 8ff4fc6f6ffba269cbb7cca4b05371ef 458 PRINTS PR00175 Sodium/alanine symporter signature 415 435 2.2E-56 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS09780 8ff4fc6f6ffba269cbb7cca4b05371ef 458 PRINTS PR00175 Sodium/alanine symporter signature 217 236 2.2E-56 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS09780 8ff4fc6f6ffba269cbb7cca4b05371ef 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 21 446 1.7E-160 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS19725 d0a8ec1bc389cee01a2c0099f5135470 557 Gene3D G3DSA:2.160.10.20 469 543 1.2E-7 T 29-03-2018 CHH28_RS19725 d0a8ec1bc389cee01a2c0099f5135470 557 Gene3D G3DSA:2.160.10.20 383 468 1.4E-8 T 29-03-2018 CHH28_RS19725 d0a8ec1bc389cee01a2c0099f5135470 557 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 124 291 1.5E-36 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CHH28_RS19725 d0a8ec1bc389cee01a2c0099f5135470 557 Gene3D G3DSA:2.40.50.100 207 295 9.6E-6 T 29-03-2018 CHH28_RS19725 d0a8ec1bc389cee01a2c0099f5135470 557 Gene3D G3DSA:2.40.50.100 127 202 5.6E-5 T 29-03-2018 CHH28_RS19725 d0a8ec1bc389cee01a2c0099f5135470 557 SUPERFAMILY SSF141571 399 540 1.18E-15 T 29-03-2018 CHH28_RS19725 d0a8ec1bc389cee01a2c0099f5135470 557 Pfam PF00805 Pentapeptide repeats (8 copies) 507 538 0.0018 T 29-03-2018 IPR001646 Pentapeptide repeat CHH28_RS19725 d0a8ec1bc389cee01a2c0099f5135470 557 Pfam PF00805 Pentapeptide repeats (8 copies) 422 453 0.006 T 29-03-2018 IPR001646 Pentapeptide repeat CHH28_RS00020 d0a8ec1bc389cee01a2c0099f5135470 557 Gene3D G3DSA:2.160.10.20 469 543 1.2E-7 T 29-03-2018 CHH28_RS00020 d0a8ec1bc389cee01a2c0099f5135470 557 Gene3D G3DSA:2.160.10.20 383 468 1.4E-8 T 29-03-2018 CHH28_RS00020 d0a8ec1bc389cee01a2c0099f5135470 557 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 124 291 1.5E-36 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CHH28_RS00020 d0a8ec1bc389cee01a2c0099f5135470 557 Gene3D G3DSA:2.40.50.100 207 295 9.6E-6 T 29-03-2018 CHH28_RS00020 d0a8ec1bc389cee01a2c0099f5135470 557 Gene3D G3DSA:2.40.50.100 127 202 5.6E-5 T 29-03-2018 CHH28_RS00020 d0a8ec1bc389cee01a2c0099f5135470 557 SUPERFAMILY SSF141571 399 540 1.18E-15 T 29-03-2018 CHH28_RS00020 d0a8ec1bc389cee01a2c0099f5135470 557 Pfam PF00805 Pentapeptide repeats (8 copies) 507 538 0.0018 T 29-03-2018 IPR001646 Pentapeptide repeat CHH28_RS00020 d0a8ec1bc389cee01a2c0099f5135470 557 Pfam PF00805 Pentapeptide repeats (8 copies) 422 453 0.006 T 29-03-2018 IPR001646 Pentapeptide repeat CHH28_RS15090 5fad591c7c8c65b692596e51e515d462 1065 Gene3D G3DSA:1.25.40.10 565 1065 2.7E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS15090 5fad591c7c8c65b692596e51e515d462 1065 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 190 262 9.4E-28 T 29-03-2018 IPR020012 Motility protein FimV, N-terminal CHH28_RS15090 5fad591c7c8c65b692596e51e515d462 1065 SMART SM00257 183 239 6.4E-4 T 29-03-2018 IPR018392 LysM domain CHH28_RS15090 5fad591c7c8c65b692596e51e515d462 1065 Gene3D G3DSA:3.10.350.10 178 244 1.7E-8 T 29-03-2018 CHH28_RS15090 5fad591c7c8c65b692596e51e515d462 1065 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1021 1063 2.8E-20 T 29-03-2018 IPR020011 Motility protein FimV, C-terminal CHH28_RS17645 27476da650b05c434fc54aa3b5699c70 745 ProSitePatterns PS00104 EPSP synthase signature 1. 391 405 - T 29-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CHH28_RS17645 27476da650b05c434fc54aa3b5699c70 745 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 316 733 2.8E-124 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CHH28_RS17645 27476da650b05c434fc54aa3b5699c70 745 Gene3D G3DSA:3.65.10.10 323 522 6.1E-55 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CHH28_RS17645 27476da650b05c434fc54aa3b5699c70 745 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 312 735 32.898 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CHH28_RS17645 27476da650b05c434fc54aa3b5699c70 745 Gene3D G3DSA:3.40.50.720 6 176 6.5E-36 T 29-03-2018 CHH28_RS17645 27476da650b05c434fc54aa3b5699c70 745 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 311 727 1.2E-118 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CHH28_RS17645 27476da650b05c434fc54aa3b5699c70 745 SUPERFAMILY SSF48179 180 286 2.15E-34 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CHH28_RS17645 27476da650b05c434fc54aa3b5699c70 745 Gene3D G3DSA:1.10.3660.10 186 301 4.9E-31 T 29-03-2018 CHH28_RS17645 27476da650b05c434fc54aa3b5699c70 745 SUPERFAMILY SSF55205 310 734 4.25E-130 T 29-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CHH28_RS17645 27476da650b05c434fc54aa3b5699c70 745 Pfam PF02153 Prephenate dehydrogenase 22 273 1.4E-73 T 29-03-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CHH28_RS17645 27476da650b05c434fc54aa3b5699c70 745 SUPERFAMILY SSF51735 8 174 1.29E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS17645 27476da650b05c434fc54aa3b5699c70 745 Gene3D G3DSA:3.65.10.10 523 739 1.3E-54 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CHH28_RS17645 27476da650b05c434fc54aa3b5699c70 745 ProSitePatterns PS00885 EPSP synthase signature 2. 643 661 - T 29-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 Gene3D G3DSA:2.30.30.40 618 672 8.1E-20 T 29-03-2018 CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 SMART SM00073 5 102 6.9E-31 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 Gene3D G3DSA:1.10.287.560 293 357 1.5E-19 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 SMART SM00387 401 542 6.9E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 Gene3D G3DSA:3.30.565.10 359 543 4.9E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 SUPERFAMILY SSF55874 359 540 8.77E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 Pfam PF01584 CheW-like domain 549 673 5.8E-28 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 SMART SM01231 293 356 5.9E-20 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 520 5.3E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 496 5.3E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 526 539 5.3E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 460 5.3E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 SUPERFAMILY SSF50341 541 672 1.57E-31 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 295 356 1.9E-16 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 SUPERFAMILY SSF47226 5 128 6.95E-32 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 Gene3D G3DSA:1.20.120.160 1 148 1.6E-34 T 29-03-2018 CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 Gene3D G3DSA:2.40.50.180 565 617 7.5E-11 T 29-03-2018 CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 SUPERFAMILY SSF47384 294 357 7.85E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 SMART SM00260 534 673 1.9E-40 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 541 6.8E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18800 1cb9c709168238dbfe586627f542f289 680 Pfam PF01627 Hpt domain 9 107 4.7E-19 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS12075 af6624ec6cbc21e1b1a3f63386b8823d 360 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 283 294 9.8E-10 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CHH28_RS12075 af6624ec6cbc21e1b1a3f63386b8823d 360 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 69 83 9.8E-10 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CHH28_RS12075 af6624ec6cbc21e1b1a3f63386b8823d 360 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 174 194 9.8E-10 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CHH28_RS12075 af6624ec6cbc21e1b1a3f63386b8823d 360 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 29 134 1.8E-17 T 29-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CHH28_RS12075 af6624ec6cbc21e1b1a3f63386b8823d 360 Gene3D G3DSA:3.40.50.720 150 333 4.9E-34 T 29-03-2018 CHH28_RS12075 af6624ec6cbc21e1b1a3f63386b8823d 360 SMART SM00839 143 351 4.5E-55 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CHH28_RS12075 af6624ec6cbc21e1b1a3f63386b8823d 360 SUPERFAMILY SSF51735 143 340 2.32E-42 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS12075 af6624ec6cbc21e1b1a3f63386b8823d 360 SUPERFAMILY SSF53223 23 140 2.53E-33 T 29-03-2018 CHH28_RS12075 af6624ec6cbc21e1b1a3f63386b8823d 360 Gene3D G3DSA:3.40.50.10860 2 149 2.6E-34 T 29-03-2018 CHH28_RS12075 af6624ec6cbc21e1b1a3f63386b8823d 360 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 214 327 3.9E-10 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CHH28_RS12075 af6624ec6cbc21e1b1a3f63386b8823d 360 PIRSF PIRSF000188 2 349 1.7E-115 T 29-03-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 CHH28_RS13735 e73c2d0095d1259a4c4af703d87ae347 324 Pfam PF01882 Protein of unknown function DUF58 217 293 2.1E-14 T 29-03-2018 IPR002881 Domain of unknown function DUF58 CHH28_RS18290 c0d4e28f315f766617d8500dd81f949a 875 Gene3D G3DSA:1.25.50.10 556 875 1.6E-116 T 29-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CHH28_RS18290 c0d4e28f315f766617d8500dd81f949a 875 SUPERFAMILY SSF55486 208 454 2.01E-74 T 29-03-2018 CHH28_RS18290 c0d4e28f315f766617d8500dd81f949a 875 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 449 554 3.1E-31 T 29-03-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CHH28_RS18290 c0d4e28f315f766617d8500dd81f949a 875 Gene3D G3DSA:1.10.390.10 285 448 1.9E-47 T 29-03-2018 CHH28_RS18290 c0d4e28f315f766617d8500dd81f949a 875 Pfam PF01433 Peptidase family M1 domain 213 441 4.4E-57 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CHH28_RS18290 c0d4e28f315f766617d8500dd81f949a 875 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 874 0.0 T 29-03-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 CHH28_RS18290 c0d4e28f315f766617d8500dd81f949a 875 SUPERFAMILY SSF63737 5 198 1.14E-41 T 29-03-2018 CHH28_RS18290 c0d4e28f315f766617d8500dd81f949a 875 Gene3D G3DSA:2.60.40.1730 16 198 1.3E-28 T 29-03-2018 CHH28_RS18290 c0d4e28f315f766617d8500dd81f949a 875 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 558 874 1.8E-114 T 29-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CHH28_RS18290 c0d4e28f315f766617d8500dd81f949a 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 263 273 1.1E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CHH28_RS18290 c0d4e28f315f766617d8500dd81f949a 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 299 314 1.1E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CHH28_RS18290 c0d4e28f315f766617d8500dd81f949a 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 318 330 1.1E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CHH28_RS18290 c0d4e28f315f766617d8500dd81f949a 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 181 196 1.1E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CHH28_RS18290 c0d4e28f315f766617d8500dd81f949a 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 131 146 1.1E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CHH28_RS18840 56ebcce2691063217a61ea8128123ba8 148 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 112 128 4.2E-12 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CHH28_RS18840 56ebcce2691063217a61ea8128123ba8 148 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 77 93 4.2E-12 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CHH28_RS18840 56ebcce2691063217a61ea8128123ba8 148 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 133 146 4.2E-12 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CHH28_RS18840 56ebcce2691063217a61ea8128123ba8 148 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 44 148 16.297 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CHH28_RS18840 56ebcce2691063217a61ea8128123ba8 148 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 49 147 9.3E-22 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CHH28_RS18840 56ebcce2691063217a61ea8128123ba8 148 Pfam PF02049 Flagellar hook-basal body complex protein FliE 64 148 1.2E-27 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 Gene3D G3DSA:3.20.20.10 34 266 7.7E-67 T 29-03-2018 IPR029066 PLP-binding barrel CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 411 6.2E-159 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 412 41.4 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 1.4E-24 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 1.4E-24 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 1.4E-24 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 369 382 1.4E-24 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 1.4E-24 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 Gene3D G3DSA:2.40.37.10 267 414 1.1E-38 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 29-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 30 369 9.5E-25 T 29-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 SUPERFAMILY SSF50621 258 412 2.51E-51 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 225 241 - T 29-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 SUPERFAMILY SSF51419 26 282 8.0E-81 T 29-03-2018 IPR029066 PLP-binding barrel CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 4.8E-31 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 4.8E-31 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 379 401 4.8E-31 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 4.8E-31 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CHH28_RS05455 e054106bb6683ebd610a5792d6d3093e 415 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 280 1.3E-74 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CHH28_RS06420 b90455d29ad45650399cf701f89792c4 156 ProSitePatterns PS00893 Nudix box signature. 57 78 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CHH28_RS06420 b90455d29ad45650399cf701f89792c4 156 Gene3D G3DSA:3.90.79.10 26 155 8.0E-19 T 29-03-2018 CHH28_RS06420 b90455d29ad45650399cf701f89792c4 156 SUPERFAMILY SSF55811 23 130 7.04E-22 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CHH28_RS06420 b90455d29ad45650399cf701f89792c4 156 Pfam PF00293 NUDIX domain 34 120 1.9E-11 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CHH28_RS14965 94e0e550a9c287a258cc0534da6078ef 789 Gene3D G3DSA:3.30.470.20 193 356 4.4E-45 T 29-03-2018 CHH28_RS14965 94e0e550a9c287a258cc0534da6078ef 789 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 780 8.8E-62 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CHH28_RS14965 94e0e550a9c287a258cc0534da6078ef 789 SUPERFAMILY SSF51621 460 786 1.94E-98 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CHH28_RS14965 94e0e550a9c287a258cc0534da6078ef 789 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CHH28_RS14965 94e0e550a9c287a258cc0534da6078ef 789 Gene3D G3DSA:3.20.20.60 477 788 2.8E-103 T 29-03-2018 CHH28_RS14965 94e0e550a9c287a258cc0534da6078ef 789 Gene3D G3DSA:3.30.1490.20 1 192 9.5E-58 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CHH28_RS14965 94e0e550a9c287a258cc0534da6078ef 789 SUPERFAMILY SSF52009 347 465 6.54E-35 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CHH28_RS14965 94e0e550a9c287a258cc0534da6078ef 789 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 4 785 0.0 T 29-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 CHH28_RS14965 94e0e550a9c287a258cc0534da6078ef 789 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 342 5.7E-118 T 29-03-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CHH28_RS14965 94e0e550a9c287a258cc0534da6078ef 789 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 710 725 2.2E-5 T 29-03-2018 CHH28_RS14965 94e0e550a9c287a258cc0534da6078ef 789 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 693 708 2.2E-5 T 29-03-2018 CHH28_RS14965 94e0e550a9c287a258cc0534da6078ef 789 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 746 758 2.2E-5 T 29-03-2018 CHH28_RS14965 94e0e550a9c287a258cc0534da6078ef 789 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CHH28_RS14965 94e0e550a9c287a258cc0534da6078ef 789 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 8.2E-27 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CHH28_RS14965 94e0e550a9c287a258cc0534da6078ef 789 SUPERFAMILY SSF56059 2 384 4.24E-108 T 29-03-2018 CHH28_RS14965 94e0e550a9c287a258cc0534da6078ef 789 Gene3D G3DSA:3.50.30.10 357 475 5.2E-37 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CHH28_RS14965 94e0e550a9c287a258cc0534da6078ef 789 PIRSF PIRSF000854 1 789 0.0 T 29-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 CHH28_RS12530 5473deda8dabed6cabeff834a9ca86eb 81 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 81 29.321 T 29-03-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CHH28_RS12530 5473deda8dabed6cabeff834a9ca86eb 81 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 6 80 2.0E-18 T 29-03-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CHH28_RS12530 5473deda8dabed6cabeff834a9ca86eb 81 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 9 77 5.5E-19 T 29-03-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CHH28_RS04935 87f53b8ab39033178660c5bbc1902e1c 222 Gene3D G3DSA:3.40.50.300 80 209 1.4E-11 T 29-03-2018 CHH28_RS04935 87f53b8ab39033178660c5bbc1902e1c 222 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 13 197 8.3E-70 T 29-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CHH28_RS04935 87f53b8ab39033178660c5bbc1902e1c 222 Gene3D G3DSA:3.40.50.300 14 79 8.7E-12 T 29-03-2018 CHH28_RS04935 87f53b8ab39033178660c5bbc1902e1c 222 SUPERFAMILY SSF52540 17 199 1.95E-30 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS04935 87f53b8ab39033178660c5bbc1902e1c 222 Pfam PF01926 50S ribosome-binding GTPase 31 150 6.2E-19 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS04935 87f53b8ab39033178660c5bbc1902e1c 222 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 17 201 27.171 T 29-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CHH28_RS01325 35054590ac0049293428d9d15fdc7018 342 Pfam PF01636 Phosphotransferase enzyme family 28 250 8.6E-31 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CHH28_RS01325 35054590ac0049293428d9d15fdc7018 342 Gene3D G3DSA:3.90.1200.10 102 273 3.4E-21 T 29-03-2018 CHH28_RS01325 35054590ac0049293428d9d15fdc7018 342 Gene3D G3DSA:3.30.200.20 1 96 2.5E-27 T 29-03-2018 CHH28_RS01325 35054590ac0049293428d9d15fdc7018 342 SUPERFAMILY SSF56112 10 329 1.18E-51 T 29-03-2018 IPR011009 Protein kinase-like domain CHH28_RS00280 ae8b7b4def544de0f6321780940e68ee 388 Pfam PF12327 FtsZ family, C-terminal domain 222 316 5.7E-37 T 29-03-2018 IPR024757 Cell division protein FtsZ, C-terminal CHH28_RS00280 ae8b7b4def544de0f6321780940e68ee 388 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 172 5.6E-40 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CHH28_RS00280 ae8b7b4def544de0f6321780940e68ee 388 SMART SM00864 13 205 1.7E-114 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CHH28_RS00280 ae8b7b4def544de0f6321780940e68ee 388 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 29-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CHH28_RS00280 ae8b7b4def544de0f6321780940e68ee 388 PRINTS PR00423 Cell division protein FtsZ signature 189 211 1.4E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CHH28_RS00280 ae8b7b4def544de0f6321780940e68ee 388 PRINTS PR00423 Cell division protein FtsZ signature 126 147 1.4E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CHH28_RS00280 ae8b7b4def544de0f6321780940e68ee 388 PRINTS PR00423 Cell division protein FtsZ signature 98 118 1.4E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CHH28_RS00280 ae8b7b4def544de0f6321780940e68ee 388 PRINTS PR00423 Cell division protein FtsZ signature 212 233 1.4E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CHH28_RS00280 ae8b7b4def544de0f6321780940e68ee 388 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 328 1.9E-130 T 29-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 CHH28_RS00280 ae8b7b4def544de0f6321780940e68ee 388 SUPERFAMILY SSF52490 13 208 1.14E-70 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CHH28_RS00280 ae8b7b4def544de0f6321780940e68ee 388 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 360 37.964 T 29-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 CHH28_RS00280 ae8b7b4def544de0f6321780940e68ee 388 SMART SM00865 207 325 1.5E-56 T 29-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 CHH28_RS00280 ae8b7b4def544de0f6321780940e68ee 388 Gene3D G3DSA:3.30.1330.20 215 324 2.0E-44 T 29-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 CHH28_RS00280 ae8b7b4def544de0f6321780940e68ee 388 Gene3D G3DSA:3.40.50.1440 8 214 2.4E-44 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CHH28_RS00280 ae8b7b4def544de0f6321780940e68ee 388 SUPERFAMILY SSF55307 204 318 2.01E-42 T 29-03-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 CHH28_RS00280 ae8b7b4def544de0f6321780940e68ee 388 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 29-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CHH28_RS18845 0c4c9cd9a01f90310a50282e14753b9c 453 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 214 229 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CHH28_RS18845 0c4c9cd9a01f90310a50282e14753b9c 453 SMART SM00382 148 291 4.9E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS18845 0c4c9cd9a01f90310a50282e14753b9c 453 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 341 350 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CHH28_RS18845 0c4c9cd9a01f90310a50282e14753b9c 453 Gene3D G3DSA:1.10.8.60 301 371 8.3E-20 T 29-03-2018 CHH28_RS18845 0c4c9cd9a01f90310a50282e14753b9c 453 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 152 165 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CHH28_RS18845 0c4c9cd9a01f90310a50282e14753b9c 453 Gene3D G3DSA:1.10.10.60 379 441 1.5E-8 T 29-03-2018 CHH28_RS18845 0c4c9cd9a01f90310a50282e14753b9c 453 SUPERFAMILY SSF52540 132 369 5.76E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS18845 0c4c9cd9a01f90310a50282e14753b9c 453 SMART SM00448 1 112 1.8E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS18845 0c4c9cd9a01f90310a50282e14753b9c 453 Gene3D G3DSA:3.40.50.300 126 300 1.5E-27 T 29-03-2018 CHH28_RS18845 0c4c9cd9a01f90310a50282e14753b9c 453 SUPERFAMILY SSF52172 1 173 5.83E-43 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS18845 0c4c9cd9a01f90310a50282e14753b9c 453 Pfam PF02954 Bacterial regulatory protein, Fis family 401 439 2.0E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS18845 0c4c9cd9a01f90310a50282e14753b9c 453 Pfam PF00072 Response regulator receiver domain 3 112 1.0E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS18845 0c4c9cd9a01f90310a50282e14753b9c 453 SUPERFAMILY SSF46689 341 440 1.43E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS18845 0c4c9cd9a01f90310a50282e14753b9c 453 Pfam PF00158 Sigma-54 interaction domain 130 294 5.5E-69 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CHH28_RS18845 0c4c9cd9a01f90310a50282e14753b9c 453 Gene3D G3DSA:3.40.50.2300 1 125 9.3E-35 T 29-03-2018 CHH28_RS10885 439cd28e2817d626b7d8fedf06b872dd 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 247 2.8E-28 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS10885 439cd28e2817d626b7d8fedf06b872dd 261 Gene3D G3DSA:3.40.190.10 136 253 9.7E-11 T 29-03-2018 CHH28_RS10885 439cd28e2817d626b7d8fedf06b872dd 261 SMART SM00062 23 252 1.5E-13 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS10885 439cd28e2817d626b7d8fedf06b872dd 261 Gene3D G3DSA:3.40.190.10 18 126 2.6E-19 T 29-03-2018 CHH28_RS10885 439cd28e2817d626b7d8fedf06b872dd 261 SUPERFAMILY SSF53850 24 247 8.46E-41 T 29-03-2018 CHH28_RS03030 62159174ceb9a13069f1108b72a045a5 214 Gene3D G3DSA:3.40.50.2020 1 194 3.9E-47 T 29-03-2018 CHH28_RS03030 62159174ceb9a13069f1108b72a045a5 214 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 6.9E-56 T 29-03-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CHH28_RS03030 62159174ceb9a13069f1108b72a045a5 214 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 214 33.774 T 29-03-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CHH28_RS03030 62159174ceb9a13069f1108b72a045a5 214 SUPERFAMILY SSF53271 2 211 1.61E-46 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CHH28_RS03030 62159174ceb9a13069f1108b72a045a5 214 Pfam PF00156 Phosphoribosyl transferase domain 45 144 1.8E-11 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CHH28_RS11870 61330ab2f0bcc56b79929e9824f3bed0 275 Gene3D G3DSA:3.40.50.150 76 267 3.2E-37 T 29-03-2018 CHH28_RS11870 61330ab2f0bcc56b79929e9824f3bed0 275 SUPERFAMILY SSF47757 7 76 1.57E-16 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CHH28_RS11870 61330ab2f0bcc56b79929e9824f3bed0 275 PIRSF PIRSF000410 2 268 1.3E-77 T 29-03-2018 IPR026024 Chemotaxis protein methyltransferase CheR CHH28_RS11870 61330ab2f0bcc56b79929e9824f3bed0 275 PRINTS PR00996 Glutamate methyltransferase family signature 226 249 3.4E-33 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS11870 61330ab2f0bcc56b79929e9824f3bed0 275 PRINTS PR00996 Glutamate methyltransferase family signature 32 45 3.4E-33 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS11870 61330ab2f0bcc56b79929e9824f3bed0 275 PRINTS PR00996 Glutamate methyltransferase family signature 207 221 3.4E-33 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS11870 61330ab2f0bcc56b79929e9824f3bed0 275 PRINTS PR00996 Glutamate methyltransferase family signature 136 152 3.4E-33 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS11870 61330ab2f0bcc56b79929e9824f3bed0 275 PRINTS PR00996 Glutamate methyltransferase family signature 70 82 3.4E-33 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS11870 61330ab2f0bcc56b79929e9824f3bed0 275 PRINTS PR00996 Glutamate methyltransferase family signature 104 124 3.4E-33 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS11870 61330ab2f0bcc56b79929e9824f3bed0 275 Gene3D G3DSA:1.10.155.10 4 74 7.5E-17 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CHH28_RS11870 61330ab2f0bcc56b79929e9824f3bed0 275 SMART SM00138 10 267 3.9E-80 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS11870 61330ab2f0bcc56b79929e9824f3bed0 275 SUPERFAMILY SSF53335 77 266 2.41E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS11870 61330ab2f0bcc56b79929e9824f3bed0 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 12 60 1.3E-14 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CHH28_RS11870 61330ab2f0bcc56b79929e9824f3bed0 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 77 260 1.4E-46 T 29-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CHH28_RS15085 74a6c55221266b582010c7223ebfd921 275 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 5 249 32.835 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS15085 74a6c55221266b582010c7223ebfd921 275 SUPERFAMILY SSF55120 4 259 3.02E-84 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS15085 74a6c55221266b582010c7223ebfd921 275 Pfam PF01416 tRNA pseudouridine synthase 9 109 6.0E-9 T 29-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS15085 74a6c55221266b582010c7223ebfd921 275 Pfam PF01416 tRNA pseudouridine synthase 148 250 5.7E-29 T 29-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS15085 74a6c55221266b582010c7223ebfd921 275 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 7 243 1.7E-64 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS15085 74a6c55221266b582010c7223ebfd921 275 PIRSF PIRSF001430 4 262 5.7E-70 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS15085 74a6c55221266b582010c7223ebfd921 275 Gene3D G3DSA:3.30.70.580 2 110 8.4E-30 T 29-03-2018 CHH28_RS15085 74a6c55221266b582010c7223ebfd921 275 Gene3D G3DSA:3.30.70.660 111 248 1.7E-35 T 29-03-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS03715 fbfbe32091ef70bae1d7e39ec07af65f 326 Pfam PF00491 Arginase family 39 322 1.8E-56 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 CHH28_RS03715 fbfbe32091ef70bae1d7e39ec07af65f 326 SUPERFAMILY SSF52768 8 323 1.98E-71 T 29-03-2018 CHH28_RS03715 fbfbe32091ef70bae1d7e39ec07af65f 326 Hamap MF_00737 Formimidoylglutamase [hutG]. 4 323 38.911 T 29-03-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 CHH28_RS03715 fbfbe32091ef70bae1d7e39ec07af65f 326 TIGRFAM TIGR01227 hutG: formimidoylglutamase 9 323 1.5E-90 T 29-03-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 CHH28_RS03715 fbfbe32091ef70bae1d7e39ec07af65f 326 Gene3D G3DSA:3.40.800.10 1 325 8.1E-75 T 29-03-2018 CHH28_RS03715 fbfbe32091ef70bae1d7e39ec07af65f 326 PIRSF PIRSF036979 20 326 4.2E-31 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 CHH28_RS08780 fe73a090925a81acdda72ba59c07d327 109 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CHH28_RS08780 fe73a090925a81acdda72ba59c07d327 109 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.5E-18 T 29-03-2018 IPR000813 7Fe ferredoxin GO:0009055 CHH28_RS08780 fe73a090925a81acdda72ba59c07d327 109 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.5E-18 T 29-03-2018 IPR000813 7Fe ferredoxin GO:0009055 CHH28_RS08780 fe73a090925a81acdda72ba59c07d327 109 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.5E-18 T 29-03-2018 IPR000813 7Fe ferredoxin GO:0009055 CHH28_RS08780 fe73a090925a81acdda72ba59c07d327 109 Pfam PF11953 Domain of unknown function (DUF3470) 66 109 6.0E-20 T 29-03-2018 IPR022569 Ferredoxin, C-terminal CHH28_RS08780 fe73a090925a81acdda72ba59c07d327 109 SUPERFAMILY SSF54862 1 79 7.15E-22 T 29-03-2018 CHH28_RS08780 fe73a090925a81acdda72ba59c07d327 109 Gene3D G3DSA:3.30.70.20 46 108 2.0E-8 T 29-03-2018 CHH28_RS08780 fe73a090925a81acdda72ba59c07d327 109 Gene3D G3DSA:3.30.70.20 2 45 2.4E-12 T 29-03-2018 CHH28_RS08780 fe73a090925a81acdda72ba59c07d327 109 Pfam PF00037 4Fe-4S binding domain 34 56 4.1E-6 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CHH28_RS10230 190a5ad76571fb2f042f48b7f00a539f 459 Gene3D G3DSA:3.40.50.1010 8 237 4.1E-35 T 29-03-2018 IPR029060 PIN domain-like CHH28_RS10230 190a5ad76571fb2f042f48b7f00a539f 459 Pfam PF13638 PIN domain 11 156 3.8E-37 T 29-03-2018 IPR002716 PIN domain CHH28_RS10230 190a5ad76571fb2f042f48b7f00a539f 459 Pfam PF02562 PhoH-like protein 249 444 5.2E-47 T 29-03-2018 IPR003714 PhoH-like protein GO:0005524 CHH28_RS10230 190a5ad76571fb2f042f48b7f00a539f 459 Gene3D G3DSA:3.40.50.300 246 452 1.5E-21 T 29-03-2018 CHH28_RS10230 190a5ad76571fb2f042f48b7f00a539f 459 SUPERFAMILY SSF88723 106 155 2.35E-13 T 29-03-2018 IPR029060 PIN domain-like CHH28_RS10230 190a5ad76571fb2f042f48b7f00a539f 459 SUPERFAMILY SSF88723 9 70 2.35E-13 T 29-03-2018 IPR029060 PIN domain-like CHH28_RS10230 190a5ad76571fb2f042f48b7f00a539f 459 SUPERFAMILY SSF52540 199 438 7.13E-32 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS10230 190a5ad76571fb2f042f48b7f00a539f 459 SMART SM00670 9 143 4.2E-11 T 29-03-2018 IPR002716 PIN domain CHH28_RS00230 e1141de0af83f067a71cf8002b768f6a 158 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 151 24.009 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CHH28_RS00230 e1141de0af83f067a71cf8002b768f6a 158 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 117 127 - T 29-03-2018 IPR020549 Endoribonuclease YbeY, conserved site CHH28_RS00230 e1141de0af83f067a71cf8002b768f6a 158 Gene3D G3DSA:3.40.390.30 2 158 4.1E-53 T 29-03-2018 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 CHH28_RS00230 e1141de0af83f067a71cf8002b768f6a 158 Pfam PF02130 Uncharacterized protein family UPF0054 21 146 1.1E-38 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CHH28_RS00230 e1141de0af83f067a71cf8002b768f6a 158 SUPERFAMILY SSF55486 17 153 8.55E-48 T 29-03-2018 CHH28_RS00230 e1141de0af83f067a71cf8002b768f6a 158 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 43 148 1.2E-35 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 6.0E-30 T 29-03-2018 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 6.0E-30 T 29-03-2018 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 6.0E-30 T 29-03-2018 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.0E-30 T 29-03-2018 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 6.0E-30 T 29-03-2018 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 SUPERFAMILY SSF51905 1 322 6.57E-56 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 325 1.8E-62 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 1 463 64.117 T 29-03-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 Gene3D G3DSA:3.30.390.30 334 461 4.6E-32 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 Gene3D G3DSA:3.40.50.720 162 333 7.7E-31 T 29-03-2018 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 PIRSF PIRSF000350 1 460 1.5E-70 T 29-03-2018 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 Gene3D G3DSA:3.50.50.60 2 161 1.4E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 455 2.3E-27 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 SUPERFAMILY SSF55424 343 460 1.19E-28 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 6.1E-54 T 29-03-2018 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 6.1E-54 T 29-03-2018 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 6.1E-54 T 29-03-2018 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 6.1E-54 T 29-03-2018 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 6.1E-54 T 29-03-2018 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 6.1E-54 T 29-03-2018 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 420 6.1E-54 T 29-03-2018 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 340 361 6.1E-54 T 29-03-2018 CHH28_RS14220 3f587abe641a95701a049ffc92abc714 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 6.1E-54 T 29-03-2018 CHH28_RS13230 eb868389c51bf7e7339a805c3327712b 161 Gene3D G3DSA:3.40.30.10 5 159 9.2E-48 T 29-03-2018 CHH28_RS13230 eb868389c51bf7e7339a805c3327712b 161 ProSitePatterns PS00460 Glutathione peroxidases active site. 22 37 - T 29-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 CHH28_RS13230 eb868389c51bf7e7339a805c3327712b 161 Pfam PF00255 Glutathione peroxidase 7 109 3.0E-42 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CHH28_RS13230 eb868389c51bf7e7339a805c3327712b 161 PRINTS PR01011 Glutathione peroxidase family signature 20 37 3.0E-19 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CHH28_RS13230 eb868389c51bf7e7339a805c3327712b 161 PRINTS PR01011 Glutathione peroxidase family signature 121 130 3.0E-19 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CHH28_RS13230 eb868389c51bf7e7339a805c3327712b 161 PRINTS PR01011 Glutathione peroxidase family signature 55 71 3.0E-19 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CHH28_RS13230 eb868389c51bf7e7339a805c3327712b 161 PIRSF PIRSF000303 1 160 8.1E-68 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CHH28_RS13230 eb868389c51bf7e7339a805c3327712b 161 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 58 65 - T 29-03-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 CHH28_RS13230 eb868389c51bf7e7339a805c3327712b 161 SUPERFAMILY SSF52833 9 157 1.07E-60 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS08650 156b5f96c67a7ba81fc2bba5c88f3ae4 325 Gene3D G3DSA:3.40.50.10490 3 199 9.9E-56 T 29-03-2018 CHH28_RS08650 156b5f96c67a7ba81fc2bba5c88f3ae4 325 PIRSF PIRSF004692 1 325 1.2E-133 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CHH28_RS08650 156b5f96c67a7ba81fc2bba5c88f3ae4 325 SUPERFAMILY SSF53697 10 285 1.07E-66 T 29-03-2018 CHH28_RS08650 156b5f96c67a7ba81fc2bba5c88f3ae4 325 Gene3D G3DSA:3.10.580.10 200 325 2.2E-22 T 29-03-2018 CHH28_RS08650 156b5f96c67a7ba81fc2bba5c88f3ae4 325 Pfam PF00571 CBS domain 203 259 3.0E-5 T 29-03-2018 IPR000644 CBS domain CHH28_RS08650 156b5f96c67a7ba81fc2bba5c88f3ae4 325 Pfam PF00571 CBS domain 271 322 2.9E-8 T 29-03-2018 IPR000644 CBS domain CHH28_RS08650 156b5f96c67a7ba81fc2bba5c88f3ae4 325 SMART SM00116 277 324 4.2E-4 T 29-03-2018 IPR000644 CBS domain CHH28_RS08650 156b5f96c67a7ba81fc2bba5c88f3ae4 325 SMART SM00116 212 260 0.72 T 29-03-2018 IPR000644 CBS domain CHH28_RS08650 156b5f96c67a7ba81fc2bba5c88f3ae4 325 Pfam PF01380 SIS domain 43 173 1.8E-30 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CHH28_RS08650 156b5f96c67a7ba81fc2bba5c88f3ae4 325 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 47 315 2.2E-108 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CHH28_RS13355 fc95efe2ca59e9bf8bf637a2b44d7503 668 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 285 291 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CHH28_RS13355 fc95efe2ca59e9bf8bf637a2b44d7503 668 Gene3D G3DSA:3.40.50.150 175 552 1.0E-45 T 29-03-2018 CHH28_RS13355 fc95efe2ca59e9bf8bf637a2b44d7503 668 SUPERFAMILY SSF53335 76 508 4.45E-116 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS13355 fc95efe2ca59e9bf8bf637a2b44d7503 668 SUPERFAMILY SSF53335 6 44 4.45E-116 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS13355 fc95efe2ca59e9bf8bf637a2b44d7503 668 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 282 294 8.4E-13 T 29-03-2018 CHH28_RS13355 fc95efe2ca59e9bf8bf637a2b44d7503 668 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 177 193 8.4E-13 T 29-03-2018 CHH28_RS13355 fc95efe2ca59e9bf8bf637a2b44d7503 668 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 210 224 8.4E-13 T 29-03-2018 CHH28_RS13355 fc95efe2ca59e9bf8bf637a2b44d7503 668 Pfam PF02384 N-6 DNA Methylase 155 463 1.7E-58 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CHH28_RS13355 fc95efe2ca59e9bf8bf637a2b44d7503 668 Pfam PF12161 HsdM N-terminal domain 9 142 1.9E-23 T 29-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CHH28_RS14800 77dca48071b0a71cc9d22fb1d258ea5d 430 SUPERFAMILY SSF48452 296 411 8.73E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS14800 77dca48071b0a71cc9d22fb1d258ea5d 430 Gene3D G3DSA:1.25.40.10 10 135 2.1E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS14800 77dca48071b0a71cc9d22fb1d258ea5d 430 SMART SM00028 370 403 73.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS14800 77dca48071b0a71cc9d22fb1d258ea5d 430 SMART SM00028 63 96 67.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS14800 77dca48071b0a71cc9d22fb1d258ea5d 430 SMART SM00028 333 366 230.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS14800 77dca48071b0a71cc9d22fb1d258ea5d 430 SMART SM00028 151 184 28.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS14800 77dca48071b0a71cc9d22fb1d258ea5d 430 Gene3D G3DSA:1.25.40.10 198 310 3.0E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS14800 77dca48071b0a71cc9d22fb1d258ea5d 430 Gene3D G3DSA:1.25.40.10 352 421 1.5E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS14800 77dca48071b0a71cc9d22fb1d258ea5d 430 Gene3D G3DSA:1.10.150.200 136 197 9.1E-4 T 29-03-2018 CHH28_RS14800 77dca48071b0a71cc9d22fb1d258ea5d 430 Gene3D G3DSA:1.25.40.10 311 351 0.016 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS14800 77dca48071b0a71cc9d22fb1d258ea5d 430 SUPERFAMILY SSF48452 150 252 5.09E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS06260 b3d8faa2062a76ac008317e05f71091f 237 SUPERFAMILY SSF52266 50 231 3.36E-46 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain CHH28_RS06260 b3d8faa2062a76ac008317e05f71091f 237 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 55 218 2.6E-24 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain CHH28_RS06260 b3d8faa2062a76ac008317e05f71091f 237 Gene3D G3DSA:3.40.50.1110 48 236 2.7E-37 T 29-03-2018 CHH28_RS07855 d622824ab2e5992ae824b058115bc7d7 493 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 484 4.1E-172 T 29-03-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CHH28_RS07855 d622824ab2e5992ae824b058115bc7d7 493 SUPERFAMILY SSF56322 14 484 3.92E-160 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CHH28_RS07855 d622824ab2e5992ae824b058115bc7d7 493 Pfam PF00425 chorismate binding enzyme 223 476 1.1E-95 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CHH28_RS07855 d622824ab2e5992ae824b058115bc7d7 493 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 169 7.2E-37 T 29-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CHH28_RS07855 d622824ab2e5992ae824b058115bc7d7 493 Gene3D G3DSA:3.60.120.10 13 486 1.3E-169 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CHH28_RS07855 d622824ab2e5992ae824b058115bc7d7 493 PRINTS PR00095 Anthranilate synthase component I signature 324 337 2.2E-26 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CHH28_RS07855 d622824ab2e5992ae824b058115bc7d7 493 PRINTS PR00095 Anthranilate synthase component I signature 338 351 2.2E-26 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CHH28_RS07855 d622824ab2e5992ae824b058115bc7d7 493 PRINTS PR00095 Anthranilate synthase component I signature 418 432 2.2E-26 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CHH28_RS07855 d622824ab2e5992ae824b058115bc7d7 493 PRINTS PR00095 Anthranilate synthase component I signature 433 447 2.2E-26 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CHH28_RS10130 cdb7c970c3d781ecdaf3586e5ea33c5c 548 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 409 418 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CHH28_RS10130 cdb7c970c3d781ecdaf3586e5ea33c5c 548 SUPERFAMILY SSF55781 10 163 8.72E-19 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS10130 cdb7c970c3d781ecdaf3586e5ea33c5c 548 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 282 297 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CHH28_RS10130 cdb7c970c3d781ecdaf3586e5ea33c5c 548 SMART SM00065 23 171 8.3E-12 T 29-03-2018 IPR003018 GAF domain GO:0005515 CHH28_RS10130 cdb7c970c3d781ecdaf3586e5ea33c5c 548 Pfam PF00158 Sigma-54 interaction domain 196 362 1.1E-66 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CHH28_RS10130 cdb7c970c3d781ecdaf3586e5ea33c5c 548 Gene3D G3DSA:1.10.10.60 487 534 4.8E-10 T 29-03-2018 CHH28_RS10130 cdb7c970c3d781ecdaf3586e5ea33c5c 548 SUPERFAMILY SSF52540 195 430 2.66E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS10130 cdb7c970c3d781ecdaf3586e5ea33c5c 548 Gene3D G3DSA:3.30.450.40 8 192 5.1E-21 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS10130 cdb7c970c3d781ecdaf3586e5ea33c5c 548 SMART SM00382 216 359 8.4E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS10130 cdb7c970c3d781ecdaf3586e5ea33c5c 548 Gene3D G3DSA:1.10.8.60 369 486 9.5E-18 T 29-03-2018 CHH28_RS10130 cdb7c970c3d781ecdaf3586e5ea33c5c 548 SUPERFAMILY SSF46689 481 529 1.03E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS10130 cdb7c970c3d781ecdaf3586e5ea33c5c 548 Pfam PF01590 GAF domain 25 160 2.3E-8 T 29-03-2018 IPR003018 GAF domain GO:0005515 CHH28_RS10130 cdb7c970c3d781ecdaf3586e5ea33c5c 548 Gene3D G3DSA:3.40.50.300 193 368 3.8E-28 T 29-03-2018 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 SMART SM00532 10 455 1.1E-254 T 29-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 Pfam PF12826 Helix-hairpin-helix motif 517 580 1.1E-21 T 29-03-2018 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 Pfam PF14520 Helix-hairpin-helix domain 453 507 7.4E-8 T 29-03-2018 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 Gene3D G3DSA:3.30.470.30 126 259 3.7E-50 T 29-03-2018 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 415 441 3.0E-8 T 29-03-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 Hamap MF_01588 DNA ligase [ligA]. 9 674 52.365 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 SUPERFAMILY SSF52113 598 676 2.8E-17 T 29-03-2018 IPR001357 BRCT domain CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 18 669 1.6E-255 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 Gene3D G3DSA:1.10.150.20 439 512 4.6E-26 T 29-03-2018 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 SMART SM00292 600 677 2.6E-6 T 29-03-2018 IPR001357 BRCT domain CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 Gene3D G3DSA:1.10.287.610 3 74 8.5E-24 T 29-03-2018 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 Gene3D G3DSA:3.40.50.10190 579 678 2.9E-25 T 29-03-2018 IPR001357 BRCT domain CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 600 670 1.2E-11 T 29-03-2018 IPR001357 BRCT domain CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 SUPERFAMILY SSF56091 8 323 6.58E-117 T 29-03-2018 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 338 353 - T 29-03-2018 IPR033136 NAD-dependent DNA ligase, conserved site CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 SMART SM00278 551 570 270.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 SMART SM00278 487 506 2.4 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 SMART SM00278 519 538 310.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 SMART SM00278 453 472 13.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 PIRSF PIRSF001604 3 679 1.7E-246 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 SUPERFAMILY SSF50249 326 406 1.88E-28 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 Gene3D G3DSA:2.40.50.140 324 397 1.6E-34 T 29-03-2018 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 Gene3D G3DSA:1.10.150.20 513 578 6.3E-27 T 29-03-2018 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 10 324 9.5E-126 T 29-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 SUPERFAMILY SSF47781 411 590 2.04E-59 T 29-03-2018 IPR010994 RuvA domain 2-like CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 329 405 1.6E-36 T 29-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CHH28_RS13555 60aaf32623bcec1685d8a0c17eeddcc4 680 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 122 151 - T 29-03-2018 IPR018239 NAD-dependent DNA ligase, active site CHH28_RS05750 6d4735693585222399efef84f4bbfde4 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 256 1.8E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS05750 6d4735693585222399efef84f4bbfde4 268 Gene3D G3DSA:1.10.3720.10 6 268 3.0E-39 T 29-03-2018 CHH28_RS05750 6d4735693585222399efef84f4bbfde4 268 SUPERFAMILY SSF161098 5 266 1.87E-52 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS08080 b11afd0712ee5379b3b94c71c265aa4a 247 ProSitePatterns PS00195 Glutaredoxin active site. 177 193 - T 29-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CHH28_RS08080 b11afd0712ee5379b3b94c71c265aa4a 247 Gene3D G3DSA:3.40.30.10 170 247 1.6E-18 T 29-03-2018 CHH28_RS08080 b11afd0712ee5379b3b94c71c265aa4a 247 Pfam PF00462 Glutaredoxin 177 233 2.0E-15 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CHH28_RS08080 b11afd0712ee5379b3b94c71c265aa4a 247 Pfam PF08534 Redoxin 7 162 1.4E-33 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CHH28_RS08080 b11afd0712ee5379b3b94c71c265aa4a 247 Gene3D G3DSA:3.40.30.10 6 165 2.6E-28 T 29-03-2018 CHH28_RS08080 b11afd0712ee5379b3b94c71c265aa4a 247 PRINTS PR00160 Glutaredoxin signature 216 229 4.1E-11 T 29-03-2018 IPR014025 Glutaredoxin subgroup CHH28_RS08080 b11afd0712ee5379b3b94c71c265aa4a 247 PRINTS PR00160 Glutaredoxin signature 175 193 4.1E-11 T 29-03-2018 IPR014025 Glutaredoxin subgroup CHH28_RS08080 b11afd0712ee5379b3b94c71c265aa4a 247 PRINTS PR00160 Glutaredoxin signature 230 243 4.1E-11 T 29-03-2018 IPR014025 Glutaredoxin subgroup CHH28_RS08080 b11afd0712ee5379b3b94c71c265aa4a 247 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 166 243 1.0E-34 T 29-03-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 CHH28_RS08080 b11afd0712ee5379b3b94c71c265aa4a 247 SUPERFAMILY SSF52833 7 242 2.42E-47 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS15400 add835fdb7161a1b6f4f9bd5d8071c8a 401 Pfam PF11871 Domain of unknown function (DUF3391) 3 129 4.2E-30 T 29-03-2018 IPR021812 Protein of unknown function DUF3391 CHH28_RS15400 add835fdb7161a1b6f4f9bd5d8071c8a 401 Gene3D G3DSA:1.10.3210.10 137 324 9.4E-43 T 29-03-2018 CHH28_RS15400 add835fdb7161a1b6f4f9bd5d8071c8a 401 Pfam PF01966 HD domain 162 283 7.7E-16 T 29-03-2018 IPR006674 HD domain CHH28_RS15400 add835fdb7161a1b6f4f9bd5d8071c8a 401 SMART SM00471 157 293 3.4E-9 T 29-03-2018 IPR003607 HD/PDEase domain CHH28_RS15400 add835fdb7161a1b6f4f9bd5d8071c8a 401 SUPERFAMILY SSF109604 149 321 3.93E-34 T 29-03-2018 CHH28_RS07835 6b1e772b9f9ade89c1cd253f9d49d949 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 58 2.8E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS07835 6b1e772b9f9ade89c1cd253f9d49d949 193 SUPERFAMILY SSF46689 5 72 6.45E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS07835 6b1e772b9f9ade89c1cd253f9d49d949 193 Gene3D G3DSA:1.10.10.60 46 164 4.3E-8 T 29-03-2018 CHH28_RS07835 6b1e772b9f9ade89c1cd253f9d49d949 193 Gene3D G3DSA:1.10.10.60 1 45 1.7E-13 T 29-03-2018 CHH28_RS04990 88700d1a3e3ed411a72fd27ce619a0f1 502 SUPERFAMILY SSF54211 8 169 2.58E-31 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS04990 88700d1a3e3ed411a72fd27ce619a0f1 502 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 403 495 9.1E-31 T 29-03-2018 IPR025158 Mg chelatase-related protein, C-terminal domain CHH28_RS04990 88700d1a3e3ed411a72fd27ce619a0f1 502 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 318 331 2.7E-7 T 29-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CHH28_RS04990 88700d1a3e3ed411a72fd27ce619a0f1 502 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 342 354 2.7E-7 T 29-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CHH28_RS04990 88700d1a3e3ed411a72fd27ce619a0f1 502 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 290 304 2.7E-7 T 29-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CHH28_RS04990 88700d1a3e3ed411a72fd27ce619a0f1 502 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 2.7E-7 T 29-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CHH28_RS04990 88700d1a3e3ed411a72fd27ce619a0f1 502 SMART SM00382 210 393 6.6E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS04990 88700d1a3e3ed411a72fd27ce619a0f1 502 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.5E-46 T 29-03-2018 CHH28_RS04990 88700d1a3e3ed411a72fd27ce619a0f1 502 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 394 1.3E-95 T 29-03-2018 IPR000523 Magnesium chelatase ChlI domain CHH28_RS04990 88700d1a3e3ed411a72fd27ce619a0f1 502 SUPERFAMILY SSF52540 190 499 3.27E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS04990 88700d1a3e3ed411a72fd27ce619a0f1 502 Gene3D G3DSA:3.40.50.300 181 458 2.1E-23 T 29-03-2018 CHH28_RS04990 88700d1a3e3ed411a72fd27ce619a0f1 502 Gene3D G3DSA:3.30.230.10 3 180 1.2E-39 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CHH28_RS04990 88700d1a3e3ed411a72fd27ce619a0f1 502 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 495 1.7E-199 T 29-03-2018 IPR004482 Mg chelatase-related protein CHH28_RS05590 63611db142e044b6a920e9b6d5b21c3e 323 SUPERFAMILY SSF52540 20 276 1.72E-38 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS05590 63611db142e044b6a920e9b6d5b21c3e 323 Gene3D G3DSA:1.10.8.300 193 301 3.3E-26 T 29-03-2018 CHH28_RS05590 63611db142e044b6a920e9b6d5b21c3e 323 Gene3D G3DSA:3.40.50.300 13 179 9.8E-23 T 29-03-2018 CHH28_RS05590 63611db142e044b6a920e9b6d5b21c3e 323 PIRSF PIRSF002849 1 306 1.0E-116 T 29-03-2018 CHH28_RS05590 63611db142e044b6a920e9b6d5b21c3e 323 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 32 162 1.1E-61 T 29-03-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 CHH28_RS07975 31ddb9e54e4ab97bcbf71555cf085a16 266 Pfam PF00218 Indole-3-glycerol phosphate synthase 7 264 8.4E-97 T 29-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CHH28_RS07975 31ddb9e54e4ab97bcbf71555cf085a16 266 Gene3D G3DSA:3.20.20.70 13 266 9.6E-70 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS07975 31ddb9e54e4ab97bcbf71555cf085a16 266 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 5 266 35.831 T 29-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CHH28_RS07975 31ddb9e54e4ab97bcbf71555cf085a16 266 SUPERFAMILY SSF51366 4 265 2.47E-86 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CHH28_RS07975 31ddb9e54e4ab97bcbf71555cf085a16 266 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 60 78 - T 29-03-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 CHH28_RS03170 2857c9f100a100a1f06382f87c13135f 302 SUPERFAMILY SSF52172 1 149 4.55E-29 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS03170 2857c9f100a100a1f06382f87c13135f 302 Pfam PF00072 Response regulator receiver domain 4 114 1.0E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS03170 2857c9f100a100a1f06382f87c13135f 302 Gene3D G3DSA:3.40.50.2300 1 272 1.3E-30 T 29-03-2018 CHH28_RS03170 2857c9f100a100a1f06382f87c13135f 302 SMART SM00448 1 115 3.8E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 Gene3D G3DSA:3.30.70.1430 39 141 2.4E-28 T 29-03-2018 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 Gene3D G3DSA:3.30.2090.10 182 277 3.0E-21 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 Gene3D G3DSA:1.20.1640.10 289 508 3.9E-51 T 29-03-2018 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 SUPERFAMILY SSF82866 298 500 2.35E-53 T 29-03-2018 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1026 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 SUPERFAMILY SSF82866 826 1022 5.1E-41 T 29-03-2018 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 7.8E-90 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 7.8E-90 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 7.8E-90 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 7.8E-90 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 7.8E-90 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 7.8E-90 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 7.8E-90 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 7.8E-90 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 7.8E-90 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 SUPERFAMILY SSF82714 717 801 8.37E-21 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 SUPERFAMILY SSF82693 136 183 1.03E-26 T 29-03-2018 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 SUPERFAMILY SSF82693 276 332 1.03E-26 T 29-03-2018 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 Gene3D G3DSA:3.30.2090.10 716 803 2.3E-19 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 SUPERFAMILY SSF82693 667 716 1.96E-19 T 29-03-2018 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 SUPERFAMILY SSF82693 803 852 1.96E-19 T 29-03-2018 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 SUPERFAMILY SSF82714 185 274 3.66E-23 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 Pfam PF00873 AcrB/AcrD/AcrF family 2 1022 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 Gene3D G3DSA:1.20.1640.10 804 1024 2.8E-35 T 29-03-2018 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 SUPERFAMILY SSF82693 563 666 3.92E-24 T 29-03-2018 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 Gene3D G3DSA:3.30.70.1430 565 666 2.3E-18 T 29-03-2018 CHH28_RS01545 306b73b710b90fbc22b3b208943e1ccf 1031 SUPERFAMILY SSF82693 39 133 2.2E-27 T 29-03-2018 CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 5.0E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 5.0E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 5.0E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 5.0E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 5.0E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 Pfam PF00873 AcrB/AcrD/AcrF family 17 1020 1.9E-165 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 SUPERFAMILY SSF82714 184 268 3.14E-10 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 SUPERFAMILY SSF82693 269 323 1.49E-10 T 29-03-2018 CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 SUPERFAMILY SSF82693 142 182 1.49E-10 T 29-03-2018 CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 Gene3D G3DSA:3.30.2090.10 712 798 9.4E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 Gene3D G3DSA:3.30.70.1430 46 145 1.5E-22 T 29-03-2018 CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 SUPERFAMILY SSF82714 724 795 3.53E-9 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 SUPERFAMILY SSF82866 798 1022 2.09E-46 T 29-03-2018 CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 SUPERFAMILY SSF82866 295 486 5.23E-38 T 29-03-2018 CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 Gene3D G3DSA:1.20.1640.10 269 491 1.1E-34 T 29-03-2018 CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 Gene3D G3DSA:1.20.1640.10 799 1034 2.1E-40 T 29-03-2018 CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 Gene3D G3DSA:3.30.2090.10 181 268 2.4E-11 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 Gene3D G3DSA:3.30.70.1430 564 662 4.1E-4 T 29-03-2018 CHH28_RS16145 eda6f23a15a5939a52b9d5b407f5fd0c 1040 SUPERFAMILY SSF82693 46 134 3.14E-20 T 29-03-2018 CHH28_RS14155 e564df66e30adc2bb9ff96e0b5940795 206 Pfam PF00849 RNA pseudouridylate synthase 13 158 3.9E-26 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS14155 e564df66e30adc2bb9ff96e0b5940795 206 Gene3D G3DSA:3.30.2350.10 8 205 2.9E-58 T 29-03-2018 CHH28_RS14155 e564df66e30adc2bb9ff96e0b5940795 206 SUPERFAMILY SSF55120 4 203 2.72E-57 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS13055 0f87d7ec93536f76d2193377041a9d7e 419 Gene3D G3DSA:3.40.190.10 161 347 1.2E-21 T 29-03-2018 CHH28_RS13055 0f87d7ec93536f76d2193377041a9d7e 419 Pfam PF13416 Bacterial extracellular solute-binding protein 148 327 2.3E-13 T 29-03-2018 CHH28_RS13055 0f87d7ec93536f76d2193377041a9d7e 419 SUPERFAMILY SSF53850 33 416 1.63E-47 T 29-03-2018 CHH28_RS06245 cdbc7da7b328d90a052ace6c4e7b6545 325 Pfam PF03280 Proteobacterial lipase chaperone protein 127 310 8.1E-31 T 29-03-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 CHH28_RS06245 cdbc7da7b328d90a052ace6c4e7b6545 325 SUPERFAMILY SSF158855 59 315 1.57E-48 T 29-03-2018 CHH28_RS11480 1938d5ddccf864db912f66dfcc614d8b 446 SUPERFAMILY SSF50156 84 176 1.31E-16 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS11480 1938d5ddccf864db912f66dfcc614d8b 446 SUPERFAMILY SSF50156 192 290 2.1E-18 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS11480 1938d5ddccf864db912f66dfcc614d8b 446 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 206 272 4.7E-8 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS11480 1938d5ddccf864db912f66dfcc614d8b 446 Gene3D G3DSA:2.30.42.10 23 189 8.8E-12 T 29-03-2018 CHH28_RS11480 1938d5ddccf864db912f66dfcc614d8b 446 SMART SM00228 206 275 1.5E-9 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS11480 1938d5ddccf864db912f66dfcc614d8b 446 SMART SM00228 110 180 1.5E-4 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS11480 1938d5ddccf864db912f66dfcc614d8b 446 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 446 1.7E-124 T 29-03-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 CHH28_RS11480 1938d5ddccf864db912f66dfcc614d8b 446 Gene3D G3DSA:2.30.42.10 214 304 3.8E-20 T 29-03-2018 CHH28_RS11480 1938d5ddccf864db912f66dfcc614d8b 446 Pfam PF02163 Peptidase family M50 5 433 9.4E-87 T 29-03-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889|Reactome: R-MMU-8963889 CHH28_RS14910 ac88d7ac713dfcec335219f6d12ba218 213 Gene3D G3DSA:1.10.150.240 13 70 7.7E-13 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CHH28_RS14910 ac88d7ac713dfcec335219f6d12ba218 213 SUPERFAMILY SSF56784 1 211 9.21E-53 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS14910 ac88d7ac713dfcec335219f6d12ba218 213 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 96 174 1.5E-9 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS14910 ac88d7ac713dfcec335219f6d12ba218 213 Gene3D G3DSA:3.40.50.1000 71 213 1.1E-30 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS14910 ac88d7ac713dfcec335219f6d12ba218 213 Pfam PF13419 Haloacid dehalogenase-like hydrolase 2 179 1.1E-29 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS14910 ac88d7ac713dfcec335219f6d12ba218 213 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 58 177 1.8E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS14315 bd60da50b6f63bae0419e39f1f10185b 439 Gene3D G3DSA:1.20.272.10 240 334 2.3E-38 T 29-03-2018 CHH28_RS14315 bd60da50b6f63bae0419e39f1f10185b 439 Gene3D G3DSA:1.10.3710.10 336 437 1.2E-33 T 29-03-2018 CHH28_RS14315 bd60da50b6f63bae0419e39f1f10185b 439 Pfam PF16193 AAA C-terminal domain 184 255 1.7E-20 T 29-03-2018 IPR032423 AAA C-terminal domain CHH28_RS14315 bd60da50b6f63bae0419e39f1f10185b 439 SUPERFAMILY SSF52540 11 228 1.42E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS14315 bd60da50b6f63bae0419e39f1f10185b 439 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 52 158 3.1E-16 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CHH28_RS14315 bd60da50b6f63bae0419e39f1f10185b 439 Gene3D G3DSA:3.40.50.300 4 152 3.6E-29 T 29-03-2018 CHH28_RS14315 bd60da50b6f63bae0419e39f1f10185b 439 SUPERFAMILY SSF48019 240 422 1.13E-74 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CHH28_RS14315 bd60da50b6f63bae0419e39f1f10185b 439 SMART SM00382 48 164 2.5E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS14315 bd60da50b6f63bae0419e39f1f10185b 439 Gene3D G3DSA:1.10.8.60 153 231 5.8E-22 T 29-03-2018 CHH28_RS14315 bd60da50b6f63bae0419e39f1f10185b 439 Pfam PF12002 MgsA AAA+ ATPase C terminal 256 422 6.0E-69 T 29-03-2018 IPR021886 MgsA AAA+ ATPase C-terminal CHH28_RS00380 5f7b7b7b7f0eefec8eac6736c391fa08 353 Gene3D G3DSA:2.60.120.10 9 130 4.6E-7 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS00380 5f7b7b7b7f0eefec8eac6736c391fa08 353 Pfam PF00027 Cyclic nucleotide-binding domain 174 259 1.9E-18 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS00380 5f7b7b7b7f0eefec8eac6736c391fa08 353 SUPERFAMILY SSF52821 253 345 2.47E-7 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS00380 5f7b7b7b7f0eefec8eac6736c391fa08 353 Gene3D G3DSA:2.60.120.10 131 261 3.0E-26 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS00380 5f7b7b7b7f0eefec8eac6736c391fa08 353 Gene3D G3DSA:3.40.250.10 262 347 1.0E-6 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS00380 5f7b7b7b7f0eefec8eac6736c391fa08 353 SUPERFAMILY SSF51206 144 259 3.8E-26 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CHH28_RS00380 5f7b7b7b7f0eefec8eac6736c391fa08 353 SMART SM00100 155 272 2.0E-14 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS00380 5f7b7b7b7f0eefec8eac6736c391fa08 353 SUPERFAMILY SSF51206 19 125 5.5E-9 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CHH28_RS08020 a9c037e971500eb4dba3aad0edb3c887 154 Gene3D G3DSA:3.30.450.20 11 154 1.1E-31 T 29-03-2018 CHH28_RS08020 a9c037e971500eb4dba3aad0edb3c887 154 SMART SM00086 89 131 5.8E-14 T 29-03-2018 IPR001610 PAC motif CHH28_RS08020 a9c037e971500eb4dba3aad0edb3c887 154 Pfam PF13426 PAS domain 25 130 7.5E-21 T 29-03-2018 IPR000014 PAS domain CHH28_RS08020 a9c037e971500eb4dba3aad0edb3c887 154 SMART SM00091 14 83 0.0037 T 29-03-2018 IPR000014 PAS domain CHH28_RS08020 a9c037e971500eb4dba3aad0edb3c887 154 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 137 1.5E-21 T 29-03-2018 IPR000014 PAS domain CHH28_RS08020 a9c037e971500eb4dba3aad0edb3c887 154 SUPERFAMILY SSF55785 21 131 2.44E-28 T 29-03-2018 IPR000014 PAS domain CHH28_RS11330 78367bb23c63d00d4cde568ea8fa0541 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 259 1.1E-42 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CHH28_RS11330 78367bb23c63d00d4cde568ea8fa0541 260 ProSitePatterns PS01287 RNA 3'-terminal phosphate cyclase signature. 137 147 - T 29-03-2018 IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site CHH28_RS11330 78367bb23c63d00d4cde568ea8fa0541 260 SUPERFAMILY SSF52096 2 260 1.86E-66 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS11330 78367bb23c63d00d4cde568ea8fa0541 260 Gene3D G3DSA:3.90.226.10 1 195 1.3E-47 T 29-03-2018 CHH28_RS11330 78367bb23c63d00d4cde568ea8fa0541 260 Gene3D G3DSA:1.10.12.10 196 260 1.9E-13 T 29-03-2018 IPR014748 Crontonase, C-terminal CHH28_RS17640 6f332fa22a4bb6165debfe67a9dbeebe 222 Gene3D G3DSA:3.40.50.300 2 220 2.4E-52 T 29-03-2018 CHH28_RS17640 6f332fa22a4bb6165debfe67a9dbeebe 222 Pfam PF02224 Cytidylate kinase 4 218 4.6E-78 T 29-03-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CHH28_RS17640 6f332fa22a4bb6165debfe67a9dbeebe 222 SUPERFAMILY SSF52540 1 217 2.82E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS17640 6f332fa22a4bb6165debfe67a9dbeebe 222 Hamap MF_00238 Cytidylate kinase [cmk]. 2 220 34.175 T 29-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CHH28_RS17640 6f332fa22a4bb6165debfe67a9dbeebe 222 TIGRFAM TIGR00017 cmk: cytidylate kinase 3 214 2.7E-83 T 29-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CHH28_RS19270 5f5344cb675919dc178668b250b8aeef 439 Gene3D G3DSA:3.90.226.10 175 421 1.7E-71 T 29-03-2018 CHH28_RS19270 5f5344cb675919dc178668b250b8aeef 439 Gene3D G3DSA:3.30.750.44 40 108 3.3E-18 T 29-03-2018 CHH28_RS19270 5f5344cb675919dc178668b250b8aeef 439 SUPERFAMILY SSF52096 34 119 6.46E-88 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS19270 5f5344cb675919dc178668b250b8aeef 439 SUPERFAMILY SSF52096 193 370 6.46E-88 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS19270 5f5344cb675919dc178668b250b8aeef 439 SMART SM00228 101 172 6.3E-13 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS19270 5f5344cb675919dc178668b250b8aeef 439 SMART SM00245 174 363 2.9E-73 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CHH28_RS19270 5f5344cb675919dc178668b250b8aeef 439 Gene3D G3DSA:2.30.42.10 109 174 3.5E-16 T 29-03-2018 CHH28_RS19270 5f5344cb675919dc178668b250b8aeef 439 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 54 372 1.0E-110 T 29-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CHH28_RS19270 5f5344cb675919dc178668b250b8aeef 439 Pfam PF03572 Peptidase family S41 199 360 2.9E-59 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CHH28_RS19270 5f5344cb675919dc178668b250b8aeef 439 Pfam PF13180 PDZ domain 101 180 1.1E-11 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS19270 5f5344cb675919dc178668b250b8aeef 439 SUPERFAMILY SSF50156 90 184 3.93E-18 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS14310 17092d30e6e5ba5a7b5d3cc40da93c43 211 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 35 196 1.3E-44 T 29-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CHH28_RS14310 17092d30e6e5ba5a7b5d3cc40da93c43 211 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 9 208 2.5E-28 T 29-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CHH28_RS14310 17092d30e6e5ba5a7b5d3cc40da93c43 211 Gene3D G3DSA:2.50.20.10 21 208 1.6E-42 T 29-03-2018 CHH28_RS14310 17092d30e6e5ba5a7b5d3cc40da93c43 211 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 9 207 27.372 T 29-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CHH28_RS14310 17092d30e6e5ba5a7b5d3cc40da93c43 211 SUPERFAMILY SSF89392 26 207 7.06E-47 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 Pfam PF00009 Elongation factor Tu GTP binding domain 10 214 9.9E-56 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 SUPERFAMILY SSF52540 5 227 2.43E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 407 4.8E-216 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 407 58.435 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.6E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.6E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.6E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.6E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.6E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 Pfam PF03143 Elongation factor Tu C-terminal domain 311 405 5.8E-33 T 29-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 Pfam PF03144 Elongation factor Tu domain 2 238 306 8.2E-16 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 SUPERFAMILY SSF50465 311 406 7.77E-35 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 Gene3D G3DSA:2.40.30.10 219 312 6.1E-30 T 29-03-2018 CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 SUPERFAMILY SSF50447 218 314 2.75E-29 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 142 1.4E-12 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 Gene3D G3DSA:2.40.30.10 313 406 3.9E-32 T 29-03-2018 CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 Gene3D G3DSA:3.40.50.300 75 216 5.4E-27 T 29-03-2018 CHH28_RS06005 f0a5907c0602ef14704b22b59452ad25 407 Gene3D G3DSA:3.40.50.300 2 74 8.7E-12 T 29-03-2018 CHH28_RS18665 3be1f443b934112f6bdbef9449f279fa 230 Gene3D G3DSA:3.30.1330.60 77 226 2.7E-30 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS18665 3be1f443b934112f6bdbef9449f279fa 230 Pfam PF00691 OmpA family 114 210 1.4E-15 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS18665 3be1f443b934112f6bdbef9449f279fa 230 SUPERFAMILY SSF103088 103 216 6.93E-26 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS18665 3be1f443b934112f6bdbef9449f279fa 230 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 9 51 3.6E-13 T 29-03-2018 IPR025713 Motility protein B, N-terminal domain CHH28_RS08430 64337232c6a00df9e239746ab426f5d2 527 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 146 9.1E-18 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CHH28_RS08430 64337232c6a00df9e239746ab426f5d2 527 Pfam PF00009 Elongation factor Tu GTP binding domain 11 275 4.4E-46 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS08430 64337232c6a00df9e239746ab426f5d2 527 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 1 527 2.6E-264 T 29-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CHH28_RS08430 64337232c6a00df9e239746ab426f5d2 527 SUPERFAMILY SSF54980 391 466 1.47E-18 T 29-03-2018 IPR035647 EF-G domain III/V-like CHH28_RS08430 64337232c6a00df9e239746ab426f5d2 527 Pfam PF16658 Class II release factor RF3, C-terminal domain 385 512 4.8E-46 T 29-03-2018 IPR032090 Peptide chain release factor 3, C-terminal CHH28_RS08430 64337232c6a00df9e239746ab426f5d2 527 Gene3D G3DSA:3.40.50.300 4 278 6.6E-36 T 29-03-2018 CHH28_RS08430 64337232c6a00df9e239746ab426f5d2 527 Gene3D G3DSA:2.40.30.10 279 385 2.0E-20 T 29-03-2018 CHH28_RS08430 64337232c6a00df9e239746ab426f5d2 527 SUPERFAMILY SSF52540 7 275 9.59E-87 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS08430 64337232c6a00df9e239746ab426f5d2 527 SUPERFAMILY SSF50447 260 391 1.25E-28 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CHH28_RS08430 64337232c6a00df9e239746ab426f5d2 527 Gene3D G3DSA:3.30.70.870 392 467 8.2E-13 T 29-03-2018 CHH28_RS08430 64337232c6a00df9e239746ab426f5d2 527 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CHH28_RS08430 64337232c6a00df9e239746ab426f5d2 527 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 525 52.104 T 29-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CHH28_RS08430 64337232c6a00df9e239746ab426f5d2 527 PRINTS PR00315 GTP-binding elongation factor signature 13 26 5.1E-10 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS08430 64337232c6a00df9e239746ab426f5d2 527 PRINTS PR00315 GTP-binding elongation factor signature 83 93 5.1E-10 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS08430 64337232c6a00df9e239746ab426f5d2 527 PRINTS PR00315 GTP-binding elongation factor signature 63 71 5.1E-10 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS08430 64337232c6a00df9e239746ab426f5d2 527 PRINTS PR00315 GTP-binding elongation factor signature 135 144 5.1E-10 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS14490 3fd9057a9a2969a0917a0d414f568722 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 50 68 9.6E-17 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CHH28_RS14490 3fd9057a9a2969a0917a0d414f568722 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 14 39 9.6E-17 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CHH28_RS14490 3fd9057a9a2969a0917a0d414f568722 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 13 145 2.0E-47 T 29-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 CHH28_RS14490 3fd9057a9a2969a0917a0d414f568722 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 34 1.9E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS14490 3fd9057a9a2969a0917a0d414f568722 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 34 5.8E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS14490 3fd9057a9a2969a0917a0d414f568722 147 SUPERFAMILY SSF54523 40 145 1.36E-30 T 29-03-2018 CHH28_RS14490 3fd9057a9a2969a0917a0d414f568722 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS14490 3fd9057a9a2969a0917a0d414f568722 147 Pfam PF08334 Type II secretion system (T2SS), protein G 37 145 2.7E-35 T 29-03-2018 IPR013545 Type II secretion system protein G CHH28_RS14490 3fd9057a9a2969a0917a0d414f568722 147 Gene3D G3DSA:3.30.700.10 29 143 3.1E-22 T 29-03-2018 CHH28_RS12590 43865fefe8c988f85b51d502f49db523 425 SUPERFAMILY SSF52964 25 155 9.55E-38 T 29-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CHH28_RS12590 43865fefe8c988f85b51d502f49db523 425 Gene3D G3DSA:2.130.10.10 163 271 1.1E-18 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS12590 43865fefe8c988f85b51d502f49db523 425 Pfam PF04052 TolB amino-terminal domain 21 120 1.9E-28 T 29-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CHH28_RS12590 43865fefe8c988f85b51d502f49db523 425 Pfam PF07676 WD40-like Beta Propeller Repeat 273 308 8.2E-8 T 29-03-2018 IPR011659 WD40-like Beta Propeller CHH28_RS12590 43865fefe8c988f85b51d502f49db523 425 Pfam PF07676 WD40-like Beta Propeller Repeat 231 265 1.4E-9 T 29-03-2018 IPR011659 WD40-like Beta Propeller CHH28_RS12590 43865fefe8c988f85b51d502f49db523 425 Pfam PF07676 WD40-like Beta Propeller Repeat 187 220 5.5E-8 T 29-03-2018 IPR011659 WD40-like Beta Propeller CHH28_RS12590 43865fefe8c988f85b51d502f49db523 425 SUPERFAMILY SSF69304 149 422 3.53E-54 T 29-03-2018 CHH28_RS12590 43865fefe8c988f85b51d502f49db523 425 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 11 421 6.0E-149 T 29-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CHH28_RS12590 43865fefe8c988f85b51d502f49db523 425 Gene3D G3DSA:2.140.10.30 272 383 1.1E-21 T 29-03-2018 CHH28_RS12590 43865fefe8c988f85b51d502f49db523 425 Gene3D G3DSA:2.140.10.30 384 422 0.015 T 29-03-2018 CHH28_RS12590 43865fefe8c988f85b51d502f49db523 425 Gene3D G3DSA:3.40.50.10070 19 158 2.4E-33 T 29-03-2018 CHH28_RS12590 43865fefe8c988f85b51d502f49db523 425 Hamap MF_00671 Protein TolB [tolB]. 2 420 33.47 T 29-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CHH28_RS02575 ad7c168424a8d840291d34e7f7e7aefb 457 SUPERFAMILY SSF116726 76 156 2.35E-15 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CHH28_RS02575 ad7c168424a8d840291d34e7f7e7aefb 457 Gene3D G3DSA:3.30.70.1450 78 156 6.4E-16 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CHH28_RS02575 ad7c168424a8d840291d34e7f7e7aefb 457 Gene3D G3DSA:3.30.70.1450 172 248 2.2E-16 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CHH28_RS02575 ad7c168424a8d840291d34e7f7e7aefb 457 Pfam PF02080 TrkA-C domain 84 152 2.1E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CHH28_RS02575 ad7c168424a8d840291d34e7f7e7aefb 457 Pfam PF02080 TrkA-C domain 176 234 4.7E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CHH28_RS02575 ad7c168424a8d840291d34e7f7e7aefb 457 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 403 419 - T 29-03-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 CHH28_RS02575 ad7c168424a8d840291d34e7f7e7aefb 457 SUPERFAMILY SSF116726 173 252 5.1E-17 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CHH28_RS02575 ad7c168424a8d840291d34e7f7e7aefb 457 Pfam PF03600 Citrate transporter 1 403 2.4E-21 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CHH28_RS18225 81a6c1b2b52b642fa5977f32dc8ccdf6 147 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 2.7E-15 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS18225 81a6c1b2b52b642fa5977f32dc8ccdf6 147 SMART SM00344 1 110 6.2E-28 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CHH28_RS18225 81a6c1b2b52b642fa5977f32dc8ccdf6 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 8.2E-13 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS18225 81a6c1b2b52b642fa5977f32dc8ccdf6 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 8.2E-13 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS18225 81a6c1b2b52b642fa5977f32dc8ccdf6 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 8.2E-13 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS18225 81a6c1b2b52b642fa5977f32dc8ccdf6 147 SUPERFAMILY SSF46785 1 59 1.05E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS18225 81a6c1b2b52b642fa5977f32dc8ccdf6 147 Gene3D G3DSA:3.30.70.920 53 146 4.2E-18 T 29-03-2018 CHH28_RS18225 81a6c1b2b52b642fa5977f32dc8ccdf6 147 Gene3D G3DSA:1.10.10.10 1 52 4.9E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS18225 81a6c1b2b52b642fa5977f32dc8ccdf6 147 Pfam PF01037 Lrp/AsnC ligand binding domain 67 139 1.4E-14 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CHH28_RS18225 81a6c1b2b52b642fa5977f32dc8ccdf6 147 SUPERFAMILY SSF54909 63 146 2.55E-14 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CHH28_RS15870 e2ca643b1ce00188985006f0cb8b80d1 686 Gene3D G3DSA:3.20.20.70 3 359 3.1E-107 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS15870 e2ca643b1ce00188985006f0cb8b80d1 686 SUPERFAMILY SSF51971 336 528 7.06E-44 T 29-03-2018 CHH28_RS15870 e2ca643b1ce00188985006f0cb8b80d1 686 Gene3D G3DSA:3.50.50.60 486 636 4.7E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS15870 e2ca643b1ce00188985006f0cb8b80d1 686 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 378 649 1.1E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS15870 e2ca643b1ce00188985006f0cb8b80d1 686 Gene3D G3DSA:3.50.50.60 393 485 1.0E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS15870 e2ca643b1ce00188985006f0cb8b80d1 686 SUPERFAMILY SSF51395 4 364 2.06E-107 T 29-03-2018 CHH28_RS15870 e2ca643b1ce00188985006f0cb8b80d1 686 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 334 1.3E-77 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CHH28_RS15870 e2ca643b1ce00188985006f0cb8b80d1 686 SUPERFAMILY SSF51905 473 638 1.69E-16 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS15870 e2ca643b1ce00188985006f0cb8b80d1 686 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 462 480 3.9E-12 T 29-03-2018 CHH28_RS15870 e2ca643b1ce00188985006f0cb8b80d1 686 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 380 399 3.9E-12 T 29-03-2018 CHH28_RS15870 e2ca643b1ce00188985006f0cb8b80d1 686 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 502 520 3.9E-12 T 29-03-2018 CHH28_RS15870 e2ca643b1ce00188985006f0cb8b80d1 686 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 379 404 7.3E-5 T 29-03-2018 CHH28_RS15870 e2ca643b1ce00188985006f0cb8b80d1 686 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 463 477 7.3E-5 T 29-03-2018 CHH28_RS15870 e2ca643b1ce00188985006f0cb8b80d1 686 Gene3D G3DSA:3.90.180.10 360 392 0.029 T 29-03-2018 CHH28_RS16170 6127fc2134473cf9387fcdaa34a6a7d3 376 Gene3D G3DSA:3.40.630.10 267 376 1.2E-7 T 29-03-2018 CHH28_RS16170 6127fc2134473cf9387fcdaa34a6a7d3 376 SUPERFAMILY SSF55031 180 290 6.28E-31 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CHH28_RS16170 6127fc2134473cf9387fcdaa34a6a7d3 376 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 376 52.353 T 29-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CHH28_RS16170 6127fc2134473cf9387fcdaa34a6a7d3 376 Gene3D G3DSA:3.40.630.10 2 266 3.1E-59 T 29-03-2018 CHH28_RS16170 6127fc2134473cf9387fcdaa34a6a7d3 376 SUPERFAMILY SSF53187 4 179 1.75E-64 T 29-03-2018 CHH28_RS16170 6127fc2134473cf9387fcdaa34a6a7d3 376 SUPERFAMILY SSF53187 293 373 1.75E-64 T 29-03-2018 CHH28_RS16170 6127fc2134473cf9387fcdaa34a6a7d3 376 Pfam PF01546 Peptidase family M20/M25/M40 62 372 1.2E-46 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CHH28_RS16170 6127fc2134473cf9387fcdaa34a6a7d3 376 Pfam PF07687 Peptidase dimerisation domain 176 279 2.3E-25 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CHH28_RS16170 6127fc2134473cf9387fcdaa34a6a7d3 376 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 372 1.7E-167 T 29-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CHH28_RS16170 6127fc2134473cf9387fcdaa34a6a7d3 376 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 98 136 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CHH28_RS09920 4f47e2478261450b6a5db4e1e0b59b75 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 10 57 5.4E-20 T 29-03-2018 CHH28_RS09920 4f47e2478261450b6a5db4e1e0b59b75 160 Pfam PF01037 Lrp/AsnC ligand binding domain 76 151 7.0E-23 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CHH28_RS09920 4f47e2478261450b6a5db4e1e0b59b75 160 Gene3D G3DSA:1.10.10.10 11 62 2.7E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS09920 4f47e2478261450b6a5db4e1e0b59b75 160 ProSitePatterns PS00519 AsnC-type HTH domain signature. 28 54 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CHH28_RS09920 4f47e2478261450b6a5db4e1e0b59b75 160 Gene3D G3DSA:3.30.70.920 63 157 1.1E-23 T 29-03-2018 CHH28_RS09920 4f47e2478261450b6a5db4e1e0b59b75 160 SUPERFAMILY SSF46785 5 96 2.73E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS09920 4f47e2478261450b6a5db4e1e0b59b75 160 SMART SM00344 10 120 3.1E-42 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CHH28_RS09920 4f47e2478261450b6a5db4e1e0b59b75 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 5.3E-16 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS09920 4f47e2478261450b6a5db4e1e0b59b75 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 5.3E-16 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS09920 4f47e2478261450b6a5db4e1e0b59b75 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 5.3E-16 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS09920 4f47e2478261450b6a5db4e1e0b59b75 160 SUPERFAMILY SSF54909 70 160 2.9E-20 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CHH28_RS09875 89682bdb7b95a77b8b93b7a5ae931736 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CHH28_RS09875 89682bdb7b95a77b8b93b7a5ae931736 401 PIRSF PIRSF000429 1 401 2.8E-105 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CHH28_RS09875 89682bdb7b95a77b8b93b7a5ae931736 401 Pfam PF02803 Thiolase, C-terminal domain 279 400 2.4E-42 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CHH28_RS09875 89682bdb7b95a77b8b93b7a5ae931736 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 3.6E-120 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CHH28_RS09875 89682bdb7b95a77b8b93b7a5ae931736 401 Pfam PF00108 Thiolase, N-terminal domain 5 228 4.9E-41 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CHH28_RS09875 89682bdb7b95a77b8b93b7a5ae931736 401 Gene3D G3DSA:3.40.47.10 152 398 1.8E-42 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS09875 89682bdb7b95a77b8b93b7a5ae931736 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CHH28_RS09875 89682bdb7b95a77b8b93b7a5ae931736 401 SUPERFAMILY SSF53901 279 400 8.23E-41 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS09875 89682bdb7b95a77b8b93b7a5ae931736 401 Gene3D G3DSA:3.40.47.10 1 151 3.4E-16 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS09875 89682bdb7b95a77b8b93b7a5ae931736 401 SUPERFAMILY SSF53901 4 278 7.92E-56 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS08810 e2c1075d84993f64e58a51a9412c6372 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.1E-16 T 29-03-2018 CHH28_RS08810 e2c1075d84993f64e58a51a9412c6372 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.1E-16 T 29-03-2018 CHH28_RS08810 e2c1075d84993f64e58a51a9412c6372 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 1.1E-16 T 29-03-2018 CHH28_RS08810 e2c1075d84993f64e58a51a9412c6372 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 1.1E-16 T 29-03-2018 CHH28_RS08810 e2c1075d84993f64e58a51a9412c6372 430 Gene3D G3DSA:3.50.50.60 163 373 3.9E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS08810 e2c1075d84993f64e58a51a9412c6372 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 9.9E-7 T 29-03-2018 CHH28_RS08810 e2c1075d84993f64e58a51a9412c6372 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 9.9E-7 T 29-03-2018 CHH28_RS08810 e2c1075d84993f64e58a51a9412c6372 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 9.9E-7 T 29-03-2018 CHH28_RS08810 e2c1075d84993f64e58a51a9412c6372 430 Gene3D G3DSA:3.50.50.60 1 162 3.1E-12 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS08810 e2c1075d84993f64e58a51a9412c6372 430 SUPERFAMILY SSF51905 2 320 7.46E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS08810 e2c1075d84993f64e58a51a9412c6372 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 334 4.2E-60 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS15195 58b710ca6076df5f4b7e5cff6d9aaf97 712 SUPERFAMILY SSF102114 371 445 1.96E-14 T 29-03-2018 CHH28_RS15195 58b710ca6076df5f4b7e5cff6d9aaf97 712 SUPERFAMILY SSF102114 475 653 1.96E-14 T 29-03-2018 CHH28_RS15195 58b710ca6076df5f4b7e5cff6d9aaf97 712 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 651 48.956 T 29-03-2018 IPR022946 Uncharacterised protein family UPF0313 CHH28_RS15195 58b710ca6076df5f4b7e5cff6d9aaf97 712 SMART SM00729 381 631 1.3E-8 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CHH28_RS15195 58b710ca6076df5f4b7e5cff6d9aaf97 712 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 385 405 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CHH28_RS15195 58b710ca6076df5f4b7e5cff6d9aaf97 712 Pfam PF04055 Radical SAM superfamily 385 590 1.1E-17 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CHH28_RS15195 58b710ca6076df5f4b7e5cff6d9aaf97 712 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 649 5.2E-261 T 29-03-2018 IPR022946 Uncharacterised protein family UPF0313 CHH28_RS15195 58b710ca6076df5f4b7e5cff6d9aaf97 712 Pfam PF11842 Domain of unknown function (DUF3362) 599 692 5.6E-40 T 29-03-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal CHH28_RS15195 58b710ca6076df5f4b7e5cff6d9aaf97 712 Gene3D G3DSA:3.20.20.70 292 704 5.2E-33 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS15195 58b710ca6076df5f4b7e5cff6d9aaf97 712 Pfam PF08497 Radical SAM N-terminal 24 384 6.8E-141 T 29-03-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal CHH28_RS19070 0ed90de7ec3e89742cc7a318d5bdb06c 643 SMART SM00387 527 639 5.8E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS19070 0ed90de7ec3e89742cc7a318d5bdb06c 643 Gene3D G3DSA:3.30.450.20 189 301 6.1E-7 T 29-03-2018 CHH28_RS19070 0ed90de7ec3e89742cc7a318d5bdb06c 643 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 581 7.4E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS19070 0ed90de7ec3e89742cc7a318d5bdb06c 643 PRINTS PR00344 Bacterial sensor protein C-terminal signature 585 595 7.4E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS19070 0ed90de7ec3e89742cc7a318d5bdb06c 643 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 616 7.4E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS19070 0ed90de7ec3e89742cc7a318d5bdb06c 643 PRINTS PR00344 Bacterial sensor protein C-terminal signature 623 636 7.4E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS19070 0ed90de7ec3e89742cc7a318d5bdb06c 643 Gene3D G3DSA:1.10.287.130 377 496 7.2E-6 T 29-03-2018 CHH28_RS19070 0ed90de7ec3e89742cc7a318d5bdb06c 643 Gene3D G3DSA:3.30.565.10 497 643 2.8E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS19070 0ed90de7ec3e89742cc7a318d5bdb06c 643 SUPERFAMILY SSF55874 487 637 4.85E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS19070 0ed90de7ec3e89742cc7a318d5bdb06c 643 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 532 637 6.8E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 Gene3D G3DSA:1.20.1640.10 265 488 1.1E-39 T 29-03-2018 CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 Gene3D G3DSA:1.20.1640.10 803 1031 1.7E-42 T 29-03-2018 CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 SUPERFAMILY SSF82866 288 486 6.93E-39 T 29-03-2018 CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 Gene3D G3DSA:3.30.70.1430 564 658 1.8E-9 T 29-03-2018 CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 SUPERFAMILY SSF82693 137 180 1.07E-16 T 29-03-2018 CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 SUPERFAMILY SSF82693 266 322 1.07E-16 T 29-03-2018 CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 SUPERFAMILY SSF82714 710 789 3.66E-6 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 Gene3D G3DSA:3.30.70.1430 41 142 2.1E-22 T 29-03-2018 CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 SUPERFAMILY SSF82866 799 1031 3.4E-42 T 29-03-2018 CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 Gene3D G3DSA:3.30.2090.10 179 264 4.6E-9 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 Gene3D G3DSA:3.30.2090.10 708 796 5.2E-11 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 2.8E-26 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 2.8E-26 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 2.8E-26 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 2.8E-26 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.8E-26 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.8E-26 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 Pfam PF00873 AcrB/AcrD/AcrF family 5 1026 2.1E-179 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 SUPERFAMILY SSF82693 41 133 2.88E-22 T 29-03-2018 CHH28_RS18135 2e3ed50d1d38b1a36e810b905fbe6aff 1040 SUPERFAMILY SSF82714 184 262 6.28E-9 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS02525 280abb894e5aac42a1110c20877c97f0 238 SUPERFAMILY SSF47616 148 228 1.47E-15 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CHH28_RS02525 280abb894e5aac42a1110c20877c97f0 238 SUPERFAMILY SSF47616 81 113 1.47E-15 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CHH28_RS02525 280abb894e5aac42a1110c20877c97f0 238 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 78 5.3E-16 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CHH28_RS02525 280abb894e5aac42a1110c20877c97f0 238 Gene3D G3DSA:3.40.30.10 1 94 2.1E-24 T 29-03-2018 CHH28_RS02525 280abb894e5aac42a1110c20877c97f0 238 Pfam PF00043 Glutathione S-transferase, C-terminal domain 172 228 2.9E-7 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CHH28_RS02525 280abb894e5aac42a1110c20877c97f0 238 SUPERFAMILY SSF52833 3 105 1.05E-24 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS02525 280abb894e5aac42a1110c20877c97f0 238 Gene3D G3DSA:1.20.1050.10 95 228 3.4E-20 T 29-03-2018 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 Gene3D G3DSA:1.20.1640.10 278 501 1.1E-46 T 29-03-2018 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 Gene3D G3DSA:1.20.1640.10 856 1039 4.6E-35 T 29-03-2018 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.2E-91 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.2E-91 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 1.2E-91 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-91 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.2E-91 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 563 580 1.2E-91 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-91 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 1.2E-91 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.2E-91 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 SUPERFAMILY SSF82714 733 818 3.92E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 SUPERFAMILY SSF82693 576 682 1.28E-24 T 29-03-2018 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 Gene3D G3DSA:3.30.70.1430 40 142 2.5E-26 T 29-03-2018 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 Gene3D G3DSA:3.30.2090.10 183 277 6.9E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 SUPERFAMILY SSF82693 683 732 3.92E-27 T 29-03-2018 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 SUPERFAMILY SSF82693 819 868 3.92E-27 T 29-03-2018 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 Gene3D G3DSA:3.30.70.1320 777 855 2.2E-8 T 29-03-2018 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 Gene3D G3DSA:3.30.70.1430 578 679 4.5E-14 T 29-03-2018 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 Gene3D G3DSA:3.30.70.1440 683 776 1.8E-20 T 29-03-2018 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 SUPERFAMILY SSF82866 842 1036 9.94E-43 T 29-03-2018 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 SUPERFAMILY SSF82693 138 184 4.53E-26 T 29-03-2018 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 SUPERFAMILY SSF82693 277 333 4.53E-26 T 29-03-2018 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1046 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 SUPERFAMILY SSF82693 41 134 4.36E-26 T 29-03-2018 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 Pfam PF00873 AcrB/AcrD/AcrF family 3 1037 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 SUPERFAMILY SSF82714 185 274 4.05E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS10490 f4f9b1252024a41ca4c974417cdb76f7 1049 SUPERFAMILY SSF82866 299 499 2.22E-48 T 29-03-2018 CHH28_RS10195 860db8579f5e0824c81084216edc1479 253 Gene3D G3DSA:3.30.2350.10 2 236 3.4E-60 T 29-03-2018 CHH28_RS10195 860db8579f5e0824c81084216edc1479 253 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 51 65 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS10195 860db8579f5e0824c81084216edc1479 253 Pfam PF00849 RNA pseudouridylate synthase 11 169 4.5E-33 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS10195 860db8579f5e0824c81084216edc1479 253 SUPERFAMILY SSF55120 2 235 5.6E-63 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS01655 88c18e637c62ca7bf6655842c867ae17 1484 Pfam PF01645 Conserved region in glutamate synthase 795 1158 5.1E-150 T 29-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CHH28_RS01655 88c18e637c62ca7bf6655842c867ae17 1484 Pfam PF00310 Glutamine amidotransferases class-II 15 428 6.6E-169 T 29-03-2018 IPR017932 Glutamine amidotransferase type 2 domain CHH28_RS01655 88c18e637c62ca7bf6655842c867ae17 1484 Pfam PF04898 Glutamate synthase central domain 459 739 1.4E-103 T 29-03-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 CHH28_RS01655 88c18e637c62ca7bf6655842c867ae17 1484 Gene3D G3DSA:3.60.20.10 15 438 3.4E-141 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS01655 88c18e637c62ca7bf6655842c867ae17 1484 SUPERFAMILY SSF51395 449 1191 6.87E-248 T 29-03-2018 CHH28_RS01655 88c18e637c62ca7bf6655842c867ae17 1484 Gene3D G3DSA:3.20.20.70 439 780 2.0E-82 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS01655 88c18e637c62ca7bf6655842c867ae17 1484 Pfam PF01493 GXGXG motif 1238 1425 3.3E-78 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CHH28_RS01655 88c18e637c62ca7bf6655842c867ae17 1484 Gene3D G3DSA:3.20.20.70 781 1210 4.0E-146 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS01655 88c18e637c62ca7bf6655842c867ae17 1484 SUPERFAMILY SSF56235 15 432 3.09E-146 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS01655 88c18e637c62ca7bf6655842c867ae17 1484 Gene3D G3DSA:2.160.20.60 1214 1481 1.5E-96 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CHH28_RS01655 88c18e637c62ca7bf6655842c867ae17 1484 SUPERFAMILY SSF69336 1214 1469 2.22E-91 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CHH28_RS00825 5be2e6ef8539cdb6c8a95519186480dc 319 SUPERFAMILY SSF161098 94 301 5.23E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS00825 5be2e6ef8539cdb6c8a95519186480dc 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 315 1.7E-29 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS00825 5be2e6ef8539cdb6c8a95519186480dc 319 Gene3D G3DSA:1.10.3720.10 4 304 3.6E-39 T 29-03-2018 CHH28_RS09035 e7efb9e2d3de6fe69d51abd068a361b9 535 Gene3D G3DSA:3.30.43.10 23 95 2.8E-7 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CHH28_RS09035 e7efb9e2d3de6fe69d51abd068a361b9 535 PIRSF PIRSF000136 21 491 8.9E-52 T 29-03-2018 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 CHH28_RS09035 e7efb9e2d3de6fe69d51abd068a361b9 535 Pfam PF04030 D-arabinono-1,4-lactone oxidase 202 487 3.4E-22 T 29-03-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 CHH28_RS09035 e7efb9e2d3de6fe69d51abd068a361b9 535 Gene3D G3DSA:3.30.465.10 96 214 1.1E-23 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CHH28_RS09035 e7efb9e2d3de6fe69d51abd068a361b9 535 SUPERFAMILY SSF56176 29 208 5.61E-32 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CHH28_RS09035 e7efb9e2d3de6fe69d51abd068a361b9 535 Pfam PF01565 FAD binding domain 42 181 4.3E-20 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CHH28_RS09035 e7efb9e2d3de6fe69d51abd068a361b9 535 Gene3D G3DSA:3.40.462.10 215 452 5.1E-7 T 29-03-2018 IPR016170 Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 Gene3D G3DSA:3.30.2090.10 189 273 2.2E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 SUPERFAMILY SSF82866 847 1068 2.35E-39 T 29-03-2018 CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 SUPERFAMILY SSF82866 302 503 1.44E-36 T 29-03-2018 CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 SUPERFAMILY SSF82693 280 335 1.26E-11 T 29-03-2018 CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 SUPERFAMILY SSF82693 141 189 1.26E-11 T 29-03-2018 CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 SUPERFAMILY SSF82693 45 140 7.85E-19 T 29-03-2018 CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 SUPERFAMILY SSF82714 754 840 3.01E-11 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 Gene3D G3DSA:3.30.70.1430 45 148 3.5E-21 T 29-03-2018 CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 SUPERFAMILY SSF82714 192 272 1.11E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 Gene3D G3DSA:3.30.2090.10 752 844 5.6E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 Gene3D G3DSA:1.20.1640.10 276 506 4.2E-36 T 29-03-2018 CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 Gene3D G3DSA:1.20.1640.10 887 1071 6.4E-32 T 29-03-2018 CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 3.9E-26 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 PRINTS PR00702 Acriflavin resistance protein family signature 397 421 3.9E-26 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 PRINTS PR00702 Acriflavin resistance protein family signature 451 474 3.9E-26 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 3.9E-26 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 PRINTS PR00702 Acriflavin resistance protein family signature 476 499 3.9E-26 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 PRINTS PR00702 Acriflavin resistance protein family signature 343 366 3.9E-26 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 Gene3D G3DSA:3.30.70.1430 594 706 6.2E-18 T 29-03-2018 CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 SUPERFAMILY SSF82693 592 707 1.57E-11 T 29-03-2018 CHH28_RS15990 93ad7f3cad2d92fab35a9ac08f3a395a 1072 Pfam PF00873 AcrB/AcrD/AcrF family 12 1068 3.6E-158 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS10515 c9cad074522e5153d70372cbd3ed26a8 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 219 5.2E-26 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CHH28_RS10515 c9cad074522e5153d70372cbd3ed26a8 388 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 127 139 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CHH28_RS10515 c9cad074522e5153d70372cbd3ed26a8 388 Gene3D G3DSA:2.40.110.10 124 223 7.6E-41 T 29-03-2018 CHH28_RS10515 c9cad074522e5153d70372cbd3ed26a8 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 381 4.5E-42 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS10515 c9cad074522e5153d70372cbd3ed26a8 388 PIRSF PIRSF016578 5 192 1.2E-6 T 29-03-2018 CHH28_RS10515 c9cad074522e5153d70372cbd3ed26a8 388 PIRSF PIRSF016578 225 388 1.1E-7 T 29-03-2018 CHH28_RS10515 c9cad074522e5153d70372cbd3ed26a8 388 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CHH28_RS10515 c9cad074522e5153d70372cbd3ed26a8 388 SUPERFAMILY SSF56645 7 243 3.01E-84 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CHH28_RS10515 c9cad074522e5153d70372cbd3ed26a8 388 SUPERFAMILY SSF47203 230 383 2.09E-48 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS10515 c9cad074522e5153d70372cbd3ed26a8 388 Gene3D G3DSA:1.20.140.10 224 388 2.1E-51 T 29-03-2018 CHH28_RS10515 c9cad074522e5153d70372cbd3ed26a8 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 121 3.5E-28 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS10515 c9cad074522e5153d70372cbd3ed26a8 388 Gene3D G3DSA:1.10.540.10 1 123 1.1E-31 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS06065 8ecc753d764093892b4e88a69ed3a634 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 5.6E-57 T 29-03-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CHH28_RS06065 8ecc753d764093892b4e88a69ed3a634 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 5.6E-54 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CHH28_RS06065 8ecc753d764093892b4e88a69ed3a634 122 SMART SM01374 1 122 1.0E-83 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CHH28_RS06065 8ecc753d764093892b4e88a69ed3a634 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 29-03-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06065 8ecc753d764093892b4e88a69ed3a634 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.39 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CHH28_RS06065 8ecc753d764093892b4e88a69ed3a634 122 SUPERFAMILY SSF50193 1 122 4.19E-50 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CHH28_RS06065 8ecc753d764093892b4e88a69ed3a634 122 Gene3D G3DSA:2.40.150.20 1 122 4.4E-52 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CHH28_RS04135 90d5918e24f2047289132de3cc9a856c 147 Pfam PF13511 Domain of unknown function (DUF4124) 9 50 1.7E-14 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 SUPERFAMILY SSF50249 255 354 9.7E-26 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS17635 2732583d8963403d6020517dae68de72 559 SUPERFAMILY SSF50249 103 185 3.73E-14 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS17635 2732583d8963403d6020517dae68de72 559 SUPERFAMILY SSF50249 190 276 1.94E-26 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS17635 2732583d8963403d6020517dae68de72 559 Gene3D G3DSA:2.40.50.140 451 546 2.5E-15 T 29-03-2018 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 Pfam PF00575 S1 RNA binding domain 102 171 7.3E-10 T 29-03-2018 IPR003029 S1 domain GO:0003676 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 Pfam PF00575 S1 RNA binding domain 450 520 7.0E-14 T 29-03-2018 IPR003029 S1 domain GO:0003676 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 Pfam PF00575 S1 RNA binding domain 275 347 4.9E-21 T 29-03-2018 IPR003029 S1 domain GO:0003676 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 29-03-2018 IPR003029 S1 domain GO:0003676 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 Pfam PF00575 S1 RNA binding domain 19 85 1.3E-4 T 29-03-2018 IPR003029 S1 domain GO:0003676 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 Pfam PF00575 S1 RNA binding domain 360 434 4.7E-18 T 29-03-2018 IPR003029 S1 domain GO:0003676 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 Gene3D G3DSA:2.40.50.140 1 87 1.8E-8 T 29-03-2018 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 Gene3D G3DSA:2.40.50.140 88 174 2.0E-7 T 29-03-2018 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 SUPERFAMILY SSF50249 342 443 2.01E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS17635 2732583d8963403d6020517dae68de72 559 Gene3D G3DSA:2.40.50.140 361 435 5.4E-20 T 29-03-2018 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 Gene3D G3DSA:2.40.50.140 274 348 1.0E-24 T 29-03-2018 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.4E-213 T 29-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 SUPERFAMILY SSF50249 429 541 7.01E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS17635 2732583d8963403d6020517dae68de72 559 SUPERFAMILY SSF50249 1 112 2.73E-20 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS17635 2732583d8963403d6020517dae68de72 559 SMART SM00316 362 434 3.9E-20 T 29-03-2018 IPR022967 RNA-binding domain, S1 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 SMART SM00316 275 347 1.5E-25 T 29-03-2018 IPR022967 RNA-binding domain, S1 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 SMART SM00316 19 87 3.1E-5 T 29-03-2018 IPR022967 RNA-binding domain, S1 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 SMART SM00316 190 260 1.1E-27 T 29-03-2018 IPR022967 RNA-binding domain, S1 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 SMART SM00316 103 171 2.4E-7 T 29-03-2018 IPR022967 RNA-binding domain, S1 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 SMART SM00316 449 520 8.9E-16 T 29-03-2018 IPR022967 RNA-binding domain, S1 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 Gene3D G3DSA:2.40.50.140 183 266 3.3E-25 T 29-03-2018 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 PIRSF PIRSF002111 1 534 2.1E-212 T 29-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 PRINTS PR00681 Ribosomal protein S1 signature 21 39 7.4E-89 T 29-03-2018 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 PRINTS PR00681 Ribosomal protein S1 signature 212 233 7.4E-89 T 29-03-2018 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 PRINTS PR00681 Ribosomal protein S1 signature 290 309 7.4E-89 T 29-03-2018 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 PRINTS PR00681 Ribosomal protein S1 signature 84 103 7.4E-89 T 29-03-2018 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 PRINTS PR00681 Ribosomal protein S1 signature 126 143 7.4E-89 T 29-03-2018 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 PRINTS PR00681 Ribosomal protein S1 signature 39 53 7.4E-89 T 29-03-2018 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 PRINTS PR00681 Ribosomal protein S1 signature 155 175 7.4E-89 T 29-03-2018 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 PRINTS PR00681 Ribosomal protein S1 signature 108 124 7.4E-89 T 29-03-2018 CHH28_RS17635 2732583d8963403d6020517dae68de72 559 PRINTS PR00681 Ribosomal protein S1 signature 330 348 7.4E-89 T 29-03-2018 CHH28_RS04155 8507fbb7eec3442db2f1dfbeab0d6f01 650 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 1.0E-37 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CHH28_RS04155 8507fbb7eec3442db2f1dfbeab0d6f01 650 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.0E-73 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CHH28_RS04155 8507fbb7eec3442db2f1dfbeab0d6f01 650 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 9.0E-45 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CHH28_RS04155 8507fbb7eec3442db2f1dfbeab0d6f01 650 SUPERFAMILY SSF51246 331 444 3.92E-40 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CHH28_RS04155 8507fbb7eec3442db2f1dfbeab0d6f01 650 Gene3D G3DSA:2.40.50.100 570 641 2.0E-18 T 29-03-2018 CHH28_RS04155 8507fbb7eec3442db2f1dfbeab0d6f01 650 SUPERFAMILY SSF51230 565 640 5.1E-20 T 29-03-2018 IPR011053 Single hybrid motif CHH28_RS04155 8507fbb7eec3442db2f1dfbeab0d6f01 650 Gene3D G3DSA:3.30.1490.20 130 202 1.2E-17 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CHH28_RS04155 8507fbb7eec3442db2f1dfbeab0d6f01 650 Pfam PF00364 Biotin-requiring enzyme 576 640 6.6E-15 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CHH28_RS04155 8507fbb7eec3442db2f1dfbeab0d6f01 650 Gene3D G3DSA:3.40.50.20 1 129 4.5E-52 T 29-03-2018 CHH28_RS04155 8507fbb7eec3442db2f1dfbeab0d6f01 650 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CHH28_RS04155 8507fbb7eec3442db2f1dfbeab0d6f01 650 SMART SM00878 336 443 4.4E-56 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CHH28_RS04155 8507fbb7eec3442db2f1dfbeab0d6f01 650 SUPERFAMILY SSF52440 1 113 1.29E-48 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CHH28_RS04155 8507fbb7eec3442db2f1dfbeab0d6f01 650 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CHH28_RS04155 8507fbb7eec3442db2f1dfbeab0d6f01 650 SUPERFAMILY SSF56059 83 344 3.36E-64 T 29-03-2018 CHH28_RS04155 8507fbb7eec3442db2f1dfbeab0d6f01 650 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 597 614 - T 29-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CHH28_RS04155 8507fbb7eec3442db2f1dfbeab0d6f01 650 Gene3D G3DSA:3.30.470.20 204 445 2.6E-106 T 29-03-2018 CHH28_RS00225 4d9abec709c526747e9580b0c1dcb5e3 342 SUPERFAMILY SSF52540 83 289 5.09E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS00225 4d9abec709c526747e9580b0c1dcb5e3 342 Gene3D G3DSA:3.40.50.300 116 332 1.0E-26 T 29-03-2018 CHH28_RS00225 4d9abec709c526747e9580b0c1dcb5e3 342 Pfam PF02562 PhoH-like protein 119 322 4.2E-91 T 29-03-2018 IPR003714 PhoH-like protein GO:0005524 CHH28_RS11495 0787aab4b67caa33ae0be061822712ef 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 7 328 3.1E-113 T 29-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CHH28_RS11495 0787aab4b67caa33ae0be061822712ef 340 Gene3D G3DSA:2.160.10.10 143 311 1.1E-44 T 29-03-2018 CHH28_RS11495 0787aab4b67caa33ae0be061822712ef 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 8 325 36.827 T 29-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CHH28_RS11495 0787aab4b67caa33ae0be061822712ef 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 266 294 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CHH28_RS11495 0787aab4b67caa33ae0be061822712ef 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 21 88 1.4E-20 T 29-03-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 CHH28_RS11495 0787aab4b67caa33ae0be061822712ef 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 142 6.2E-10 T 29-03-2018 IPR001451 Hexapeptide repeat CHH28_RS11495 0787aab4b67caa33ae0be061822712ef 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 221 256 2.0E-4 T 29-03-2018 IPR001451 Hexapeptide repeat CHH28_RS11495 0787aab4b67caa33ae0be061822712ef 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 178 1.5E-7 T 29-03-2018 IPR001451 Hexapeptide repeat CHH28_RS11495 0787aab4b67caa33ae0be061822712ef 340 Gene3D G3DSA:2.160.10.10 92 142 2.6E-15 T 29-03-2018 CHH28_RS11495 0787aab4b67caa33ae0be061822712ef 340 SUPERFAMILY SSF51161 33 316 1.99E-82 T 29-03-2018 IPR011004 Trimeric LpxA-like CHH28_RS05655 976a830e0e6525416723b088e5a0edaa 654 Pfam PF01131 DNA topoisomerase 158 596 2.8E-110 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CHH28_RS05655 976a830e0e6525416723b088e5a0edaa 654 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 319 334 - T 29-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CHH28_RS05655 976a830e0e6525416723b088e5a0edaa 654 SMART SM00436 128 223 2.4E-30 T 29-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CHH28_RS05655 976a830e0e6525416723b088e5a0edaa 654 SMART SM00493 1 124 1.1E-21 T 29-03-2018 IPR006171 TOPRIM domain CHH28_RS05655 976a830e0e6525416723b088e5a0edaa 654 SMART SM00437 282 562 1.1E-71 T 29-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CHH28_RS05655 976a830e0e6525416723b088e5a0edaa 654 Gene3D G3DSA:1.10.460.10 157 431 3.0E-39 T 29-03-2018 CHH28_RS05655 976a830e0e6525416723b088e5a0edaa 654 Gene3D G3DSA:1.10.460.10 437 654 5.4E-25 T 29-03-2018 CHH28_RS05655 976a830e0e6525416723b088e5a0edaa 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 1.4E-24 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CHH28_RS05655 976a830e0e6525416723b088e5a0edaa 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 1.4E-24 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CHH28_RS05655 976a830e0e6525416723b088e5a0edaa 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 406 422 1.4E-24 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CHH28_RS05655 976a830e0e6525416723b088e5a0edaa 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 325 334 1.4E-24 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CHH28_RS05655 976a830e0e6525416723b088e5a0edaa 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 525 539 1.4E-24 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CHH28_RS05655 976a830e0e6525416723b088e5a0edaa 654 Gene3D G3DSA:3.40.50.140 1 156 2.5E-37 T 29-03-2018 CHH28_RS05655 976a830e0e6525416723b088e5a0edaa 654 Pfam PF01751 Toprim domain 3 123 1.6E-13 T 29-03-2018 IPR006171 TOPRIM domain CHH28_RS05655 976a830e0e6525416723b088e5a0edaa 654 SUPERFAMILY SSF56712 1 609 1.96E-174 T 29-03-2018 IPR023405 DNA topoisomerase, type IA, core domain CHH28_RS05655 976a830e0e6525416723b088e5a0edaa 654 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 650 1.1E-217 T 29-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CHH28_RS06395 e1cd8f764f7e0ad46b418125cd41be47 236 SUPERFAMILY SSF52172 3 129 6.83E-30 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS06395 e1cd8f764f7e0ad46b418125cd41be47 236 Gene3D G3DSA:3.40.50.2300 2 134 2.4E-29 T 29-03-2018 CHH28_RS06395 e1cd8f764f7e0ad46b418125cd41be47 236 Pfam PF04397 LytTr DNA-binding domain 143 234 8.9E-23 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CHH28_RS06395 e1cd8f764f7e0ad46b418125cd41be47 236 SMART SM00850 139 235 3.5E-28 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CHH28_RS06395 e1cd8f764f7e0ad46b418125cd41be47 236 Pfam PF00072 Response regulator receiver domain 6 111 8.5E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS06395 e1cd8f764f7e0ad46b418125cd41be47 236 Gene3D G3DSA:2.40.50.40 135 197 2.3E-15 T 29-03-2018 CHH28_RS06395 e1cd8f764f7e0ad46b418125cd41be47 236 SMART SM00448 3 111 2.1E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS06085 db646c66328cb779e4c4ae9eed5b5a64 130 Gene3D G3DSA:3.30.1370.30 2 72 9.8E-26 T 29-03-2018 CHH28_RS06085 db646c66328cb779e4c4ae9eed5b5a64 130 SUPERFAMILY SSF56047 2 130 4.19E-44 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06085 db646c66328cb779e4c4ae9eed5b5a64 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 30.681 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06085 db646c66328cb779e4c4ae9eed5b5a64 130 Pfam PF00410 Ribosomal protein S8 5 130 3.0E-48 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06085 db646c66328cb779e4c4ae9eed5b5a64 130 Gene3D G3DSA:3.30.1490.10 74 129 2.6E-19 T 29-03-2018 CHH28_RS06085 db646c66328cb779e4c4ae9eed5b5a64 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS01080 0b2eef0ab803fba588a9d8eab2e1e9e5 363 Pfam PF02653 Branched-chain amino acid transport system / permease component 64 337 9.2E-46 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CHH28_RS01080 0b2eef0ab803fba588a9d8eab2e1e9e5 363 Gene3D G3DSA:1.10.3470.10 9 340 2.5E-32 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CHH28_RS11175 22ae8ad2e5cc1309513dc4a6d092d4bd 302 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 297 3.4E-121 T 29-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CHH28_RS11175 22ae8ad2e5cc1309513dc4a6d092d4bd 302 Gene3D G3DSA:3.40.50.1100 135 302 1.2E-47 T 29-03-2018 CHH28_RS11175 22ae8ad2e5cc1309513dc4a6d092d4bd 302 TIGRFAM TIGR01138 cysM: cysteine synthase B 7 297 6.4E-152 T 29-03-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CHH28_RS11175 22ae8ad2e5cc1309513dc4a6d092d4bd 302 Gene3D G3DSA:3.40.50.1100 25 134 2.2E-31 T 29-03-2018 CHH28_RS11175 22ae8ad2e5cc1309513dc4a6d092d4bd 302 SUPERFAMILY SSF53686 5 293 6.68E-90 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CHH28_RS11175 22ae8ad2e5cc1309513dc4a6d092d4bd 302 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 286 3.1E-69 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CHH28_RS11175 22ae8ad2e5cc1309513dc4a6d092d4bd 302 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 35 53 - T 29-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CHH28_RS05495 fc0fdcba636c7b1729328d5864b3a59c 316 SUPERFAMILY SSF52440 3 123 6.91E-42 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CHH28_RS05495 fc0fdcba636c7b1729328d5864b3a59c 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 4 121 1.2E-42 T 29-03-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CHH28_RS05495 fc0fdcba636c7b1729328d5864b3a59c 316 Gene3D G3DSA:3.30.1490.20 139 191 4.0E-21 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CHH28_RS05495 fc0fdcba636c7b1729328d5864b3a59c 316 Gene3D G3DSA:3.40.50.20 3 130 1.9E-48 T 29-03-2018 CHH28_RS05495 fc0fdcba636c7b1729328d5864b3a59c 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 159.125 T 29-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CHH28_RS05495 fc0fdcba636c7b1729328d5864b3a59c 316 SUPERFAMILY SSF56059 124 312 5.71E-56 T 29-03-2018 CHH28_RS05495 fc0fdcba636c7b1729328d5864b3a59c 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 4 312 1.2E-130 T 29-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CHH28_RS05495 fc0fdcba636c7b1729328d5864b3a59c 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 1.6E-76 T 29-03-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CHH28_RS05495 fc0fdcba636c7b1729328d5864b3a59c 316 Gene3D G3DSA:3.30.470.20 192 301 1.0E-16 T 29-03-2018 CHH28_RS01490 f98082ba8146b86ee441d4e79cc1fc8c 666 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 665 6.3E-300 T 29-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CHH28_RS01490 f98082ba8146b86ee441d4e79cc1fc8c 666 SUPERFAMILY SSF52518 6 330 1.71E-122 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CHH28_RS01490 f98082ba8146b86ee441d4e79cc1fc8c 666 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CHH28_RS01490 f98082ba8146b86ee441d4e79cc1fc8c 666 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CHH28_RS01490 f98082ba8146b86ee441d4e79cc1fc8c 666 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 1.7E-167 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CHH28_RS01490 f98082ba8146b86ee441d4e79cc1fc8c 666 Gene3D G3DSA:3.40.50.970 364 541 1.5E-40 T 29-03-2018 CHH28_RS01490 f98082ba8146b86ee441d4e79cc1fc8c 666 Pfam PF02779 Transketolase, pyrimidine binding domain 354 526 9.7E-44 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CHH28_RS01490 f98082ba8146b86ee441d4e79cc1fc8c 666 SUPERFAMILY SSF52922 535 666 9.42E-39 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CHH28_RS01490 f98082ba8146b86ee441d4e79cc1fc8c 666 SUPERFAMILY SSF52518 337 526 1.14E-63 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CHH28_RS01490 f98082ba8146b86ee441d4e79cc1fc8c 666 Pfam PF02780 Transketolase, C-terminal domain 553 658 1.5E-11 T 29-03-2018 IPR033248 Transketolase, C-terminal domain CHH28_RS01490 f98082ba8146b86ee441d4e79cc1fc8c 666 Gene3D G3DSA:3.40.50.970 1 363 3.4E-126 T 29-03-2018 CHH28_RS01490 f98082ba8146b86ee441d4e79cc1fc8c 666 SMART SM00861 355 526 1.3E-62 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CHH28_RS01490 f98082ba8146b86ee441d4e79cc1fc8c 666 Gene3D G3DSA:3.40.50.920 542 665 3.2E-29 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CHH28_RS05985 7e71823104a80a92884c91c56dede3f2 1406 Gene3D G3DSA:2.40.50.100 1009 1036 0.012 T 29-03-2018 CHH28_RS05985 7e71823104a80a92884c91c56dede3f2 1406 Gene3D G3DSA:2.40.40.20 346 488 4.3E-40 T 29-03-2018 CHH28_RS05985 7e71823104a80a92884c91c56dede3f2 1406 Gene3D G3DSA:2.40.50.100 907 1008 1.9E-31 T 29-03-2018 CHH28_RS05985 7e71823104a80a92884c91c56dede3f2 1406 Gene3D G3DSA:2.40.50.100 1037 1126 2.4E-12 T 29-03-2018 CHH28_RS05985 7e71823104a80a92884c91c56dede3f2 1406 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1026 0.0 T 29-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05985 7e71823104a80a92884c91c56dede3f2 1406 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 11 1377 18.811 T 29-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05985 7e71823104a80a92884c91c56dede3f2 1406 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 2.2E-18 T 29-03-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05985 7e71823104a80a92884c91c56dede3f2 1406 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 3.0E-75 T 29-03-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05985 7e71823104a80a92884c91c56dede3f2 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 2.2E-8 T 29-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05985 7e71823104a80a92884c91c56dede3f2 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 388 485 1.5E-27 T 29-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05985 7e71823104a80a92884c91c56dede3f2 1406 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 342 4.8E-87 T 29-03-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05985 7e71823104a80a92884c91c56dede3f2 1406 SUPERFAMILY SSF64484 1133 1364 0.0 T 29-03-2018 CHH28_RS05985 7e71823104a80a92884c91c56dede3f2 1406 SUPERFAMILY SSF64484 16 944 0.0 T 29-03-2018 CHH28_RS05985 7e71823104a80a92884c91c56dede3f2 1406 SMART SM00663 235 514 4.2E-178 T 29-03-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05985 7e71823104a80a92884c91c56dede3f2 1406 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 643 4.7E-26 T 29-03-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05985 7e71823104a80a92884c91c56dede3f2 1406 Gene3D G3DSA:3.90.105.10 832 883 0.049 T 29-03-2018 CHH28_RS05985 7e71823104a80a92884c91c56dede3f2 1406 Gene3D G3DSA:2.40.50.100 1153 1213 2.2E-15 T 29-03-2018 CHH28_RS00255 9d8fdc41c9b74d2fb178b4fb1b78d6e3 140 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.8E-5 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CHH28_RS00255 9d8fdc41c9b74d2fb178b4fb1b78d6e3 140 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.8E-5 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CHH28_RS00255 9d8fdc41c9b74d2fb178b4fb1b78d6e3 140 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 132 1.2E-29 T 29-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CHH28_RS00255 9d8fdc41c9b74d2fb178b4fb1b78d6e3 140 Gene3D G3DSA:3.90.79.10 1 140 6.4E-27 T 29-03-2018 CHH28_RS00255 9d8fdc41c9b74d2fb178b4fb1b78d6e3 140 SUPERFAMILY SSF55811 4 132 1.08E-32 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CHH28_RS00255 9d8fdc41c9b74d2fb178b4fb1b78d6e3 140 Pfam PF00293 NUDIX domain 5 128 5.9E-19 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 Gene3D G3DSA:3.40.50.2300 793 933 2.1E-25 T 29-03-2018 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 SMART SM00304 339 391 9.4E-5 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 Gene3D G3DSA:3.30.450.20 220 309 3.2E-6 T 29-03-2018 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 Pfam PF00989 PAS fold 403 494 2.4E-10 T 29-03-2018 IPR013767 PAS fold GO:0006355 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 Gene3D G3DSA:3.30.450.20 380 532 3.2E-25 T 29-03-2018 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 PRINTS PR00344 Bacterial sensor protein C-terminal signature 723 733 1.1E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 PRINTS PR00344 Bacterial sensor protein C-terminal signature 705 719 1.1E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 PRINTS PR00344 Bacterial sensor protein C-terminal signature 764 777 1.1E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 PRINTS PR00344 Bacterial sensor protein C-terminal signature 740 758 1.1E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 SMART SM00387 664 780 2.1E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 SMART SM00448 797 915 1.4E-20 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 SMART SM00448 937 1053 2.5E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 SUPERFAMILY SSF47226 1036 1049 3.14E-12 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 SUPERFAMILY SSF47226 1091 1190 3.14E-12 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 Pfam PF00512 His Kinase A (phospho-acceptor) domain 552 617 1.8E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 Gene3D G3DSA:1.20.120.160 1083 1206 4.5E-10 T 29-03-2018 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 Gene3D G3DSA:1.10.287.130 542 613 4.2E-18 T 29-03-2018 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 SUPERFAMILY SSF52172 937 1058 3.27E-35 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 SUPERFAMILY SSF103190 32 208 1.2E-41 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 Gene3D G3DSA:3.30.450.20 75 208 1.5E-40 T 29-03-2018 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 Gene3D G3DSA:3.30.565.10 621 788 1.5E-46 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 SUPERFAMILY SSF55785 409 522 1.15E-21 T 29-03-2018 IPR000014 PAS domain CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 SUPERFAMILY SSF47384 537 618 6.28E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 SUPERFAMILY SSF52172 795 923 8.97E-27 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 664 780 1.9E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 SMART SM00091 398 464 1.2E-10 T 29-03-2018 IPR000014 PAS domain CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 SMART SM00388 552 617 2.1E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 Pfam PF00072 Response regulator receiver domain 940 1051 1.3E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 Pfam PF00072 Response regulator receiver domain 799 915 8.7E-17 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 SUPERFAMILY SSF55874 606 780 7.2E-44 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 SUPERFAMILY SSF158472 343 388 9.02E-5 T 29-03-2018 CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 395 521 1.9E-22 T 29-03-2018 IPR000014 PAS domain CHH28_RS03770 0aff2aa7805f0417e96b73ff5a5da563 1291 Gene3D G3DSA:3.40.50.2300 935 1066 1.8E-38 T 29-03-2018 CHH28_RS18125 f374343389379713395784e4d734d645 635 SUPERFAMILY SSF52540 3 94 3.31E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS18125 f374343389379713395784e4d734d645 635 SUPERFAMILY SSF52540 122 239 3.31E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS18125 f374343389379713395784e4d734d645 635 SUPERFAMILY SSF52540 308 526 9.37E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS18125 f374343389379713395784e4d734d645 635 Pfam PF12848 ABC transporter 220 295 4.6E-9 T 29-03-2018 IPR032781 ABC-transporter extension domain CHH28_RS18125 f374343389379713395784e4d734d645 635 Pfam PF16326 ABC transporter C-terminal domain 563 632 1.6E-16 T 29-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CHH28_RS18125 f374343389379713395784e4d734d645 635 Gene3D G3DSA:3.40.50.300 1 261 1.3E-53 T 29-03-2018 CHH28_RS18125 f374343389379713395784e4d734d645 635 Gene3D G3DSA:3.40.50.300 276 548 2.6E-54 T 29-03-2018 CHH28_RS18125 f374343389379713395784e4d734d645 635 Pfam PF00005 ABC transporter 19 181 1.5E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS18125 f374343389379713395784e4d734d645 635 Pfam PF00005 ABC transporter 336 466 5.7E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS18125 f374343389379713395784e4d734d645 635 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS18125 f374343389379713395784e4d734d645 635 SMART SM00382 28 226 8.5E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS18125 f374343389379713395784e4d734d645 635 SMART SM00382 341 511 9.4E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS18125 f374343389379713395784e4d734d645 635 ProSitePatterns PS00211 ABC transporters family signature. 438 452 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS17590 c97c850966c8d7f44abebde0f5e34482 213 SUPERFAMILY SSF52218 4 197 9.44E-59 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS17590 c97c850966c8d7f44abebde0f5e34482 213 Pfam PF03358 NADPH-dependent FMN reductase 13 140 5.3E-11 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CHH28_RS17590 c97c850966c8d7f44abebde0f5e34482 213 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 6 197 3.6E-45 T 29-03-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CHH28_RS17590 c97c850966c8d7f44abebde0f5e34482 213 ProSitePatterns PS00201 Flavodoxin signature. 8 24 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CHH28_RS17590 c97c850966c8d7f44abebde0f5e34482 213 Gene3D G3DSA:3.40.50.360 2 208 1.0E-39 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS13140 c784795700177043d9ea4ff4cfe0b0d2 591 Gene3D G3DSA:3.30.930.10 133 586 9.1E-105 T 29-03-2018 CHH28_RS13140 c784795700177043d9ea4ff4cfe0b0d2 591 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.976 T 29-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CHH28_RS13140 c784795700177043d9ea4ff4cfe0b0d2 591 SUPERFAMILY SSF55681 426 585 9.22E-105 T 29-03-2018 CHH28_RS13140 c784795700177043d9ea4ff4cfe0b0d2 591 SUPERFAMILY SSF55681 116 293 9.22E-105 T 29-03-2018 CHH28_RS13140 c784795700177043d9ea4ff4cfe0b0d2 591 Gene3D G3DSA:2.40.50.140 1 108 2.4E-29 T 29-03-2018 CHH28_RS13140 c784795700177043d9ea4ff4cfe0b0d2 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 7.1E-250 T 29-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CHH28_RS13140 c784795700177043d9ea4ff4cfe0b0d2 591 Pfam PF01336 OB-fold nucleic acid binding domain 18 101 1.2E-17 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CHH28_RS13140 c784795700177043d9ea4ff4cfe0b0d2 591 Pfam PF02938 GAD domain 309 408 4.3E-29 T 29-03-2018 IPR029351 GAD domain Reactome: R-HSA-379726 CHH28_RS13140 c784795700177043d9ea4ff4cfe0b0d2 591 SUPERFAMILY SSF50249 1 105 7.62E-35 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS13140 c784795700177043d9ea4ff4cfe0b0d2 591 SUPERFAMILY SSF55261 291 421 1.06E-45 T 29-03-2018 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CHH28_RS13140 c784795700177043d9ea4ff4cfe0b0d2 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 558 4.3E-111 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS13140 c784795700177043d9ea4ff4cfe0b0d2 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 3.4E-25 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS13140 c784795700177043d9ea4ff4cfe0b0d2 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 3.4E-25 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS13140 c784795700177043d9ea4ff4cfe0b0d2 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 3.4E-25 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS13140 c784795700177043d9ea4ff4cfe0b0d2 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 3.4E-25 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS00970 c60e50672c120de598e08b4ef89f5114 647 Gene3D G3DSA:1.10.287.950 316 416 0.0011 T 29-03-2018 CHH28_RS00970 c60e50672c120de598e08b4ef89f5114 647 Gene3D G3DSA:1.10.287.950 417 647 2.0E-50 T 29-03-2018 CHH28_RS00970 c60e50672c120de598e08b4ef89f5114 647 Gene3D G3DSA:3.30.450.20 26 184 3.3E-14 T 29-03-2018 CHH28_RS00970 c60e50672c120de598e08b4ef89f5114 647 SMART SM00283 385 646 2.0E-77 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS00970 c60e50672c120de598e08b4ef89f5114 647 SUPERFAMILY SSF58104 338 647 1.28E-76 T 29-03-2018 CHH28_RS00970 c60e50672c120de598e08b4ef89f5114 647 SMART SM00304 316 370 7.2E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS00970 c60e50672c120de598e08b4ef89f5114 647 Gene3D G3DSA:3.30.450.20 185 295 2.5E-19 T 29-03-2018 CHH28_RS00970 c60e50672c120de598e08b4ef89f5114 647 Pfam PF02743 Cache domain 29 277 6.3E-22 T 29-03-2018 IPR033479 Double Cache domain 1 CHH28_RS00970 c60e50672c120de598e08b4ef89f5114 647 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 448 612 2.9E-44 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS06075 05c7f1cadd126e6897c717456897f589 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 9.7E-43 T 29-03-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06075 05c7f1cadd126e6897c717456897f589 179 PIRSF PIRSF002161 1 179 4.4E-66 T 29-03-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06075 05c7f1cadd126e6897c717456897f589 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.18 T 29-03-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06075 05c7f1cadd126e6897c717456897f589 179 Pfam PF00281 Ribosomal protein L5 24 80 3.2E-26 T 29-03-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06075 05c7f1cadd126e6897c717456897f589 179 SUPERFAMILY SSF55282 3 179 4.71E-78 T 29-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06075 05c7f1cadd126e6897c717456897f589 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 29-03-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06075 05c7f1cadd126e6897c717456897f589 179 Gene3D G3DSA:3.30.1440.10 1 179 5.2E-79 T 29-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS19610 91e7f6151d8f5e2dc24a8ef4343b4de6 140 SUPERFAMILY SSF54631 3 129 1.18E-18 T 29-03-2018 CHH28_RS19610 91e7f6151d8f5e2dc24a8ef4343b4de6 140 SMART SM00116 11 58 0.62 T 29-03-2018 IPR000644 CBS domain CHH28_RS19610 91e7f6151d8f5e2dc24a8ef4343b4de6 140 SMART SM00116 77 124 26.0 T 29-03-2018 IPR000644 CBS domain CHH28_RS19610 91e7f6151d8f5e2dc24a8ef4343b4de6 140 Gene3D G3DSA:3.10.580.10 57 137 7.5E-6 T 29-03-2018 CHH28_RS19610 91e7f6151d8f5e2dc24a8ef4343b4de6 140 Gene3D G3DSA:3.10.580.10 2 56 2.1E-10 T 29-03-2018 CHH28_RS19610 91e7f6151d8f5e2dc24a8ef4343b4de6 140 Pfam PF00571 CBS domain 5 53 2.5E-8 T 29-03-2018 IPR000644 CBS domain CHH28_RS02555 e22cb357ada3fa6a6432661ce48516a8 459 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 147 451 2.0E-96 T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CHH28_RS02555 e22cb357ada3fa6a6432661ce48516a8 459 SUPERFAMILY SSF53187 142 457 6.91E-93 T 29-03-2018 CHH28_RS02555 e22cb357ada3fa6a6432661ce48516a8 459 PRINTS PR00481 Cytosol aminopeptidase signature 246 267 1.1E-35 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CHH28_RS02555 e22cb357ada3fa6a6432661ce48516a8 459 PRINTS PR00481 Cytosol aminopeptidase signature 305 325 1.1E-35 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CHH28_RS02555 e22cb357ada3fa6a6432661ce48516a8 459 PRINTS PR00481 Cytosol aminopeptidase signature 224 241 1.1E-35 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CHH28_RS02555 e22cb357ada3fa6a6432661ce48516a8 459 PRINTS PR00481 Cytosol aminopeptidase signature 283 304 1.1E-35 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CHH28_RS02555 e22cb357ada3fa6a6432661ce48516a8 459 PRINTS PR00481 Cytosol aminopeptidase signature 333 348 1.1E-35 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CHH28_RS02555 e22cb357ada3fa6a6432661ce48516a8 459 Gene3D G3DSA:3.40.630.10 132 459 5.8E-103 T 29-03-2018 CHH28_RS09475 292605cc03e5319b02755ec9033204c2 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 230 248 4.7E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS09475 292605cc03e5319b02755ec9033204c2 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 209 229 4.7E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS09475 292605cc03e5319b02755ec9033204c2 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 276 294 4.7E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS09475 292605cc03e5319b02755ec9033204c2 444 Hamap MF_00900 GTPase HflX [hflX]. 36 399 45.789 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 CHH28_RS09475 292605cc03e5319b02755ec9033204c2 444 Pfam PF13167 GTP-binding GTPase N-terminal 34 121 1.0E-30 T 29-03-2018 IPR025121 GTPase HflX, N-terminal CHH28_RS09475 292605cc03e5319b02755ec9033204c2 444 PIRSF PIRSF006809 11 431 7.1E-147 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 CHH28_RS09475 292605cc03e5319b02755ec9033204c2 444 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 19 369 5.2E-154 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 CHH28_RS09475 292605cc03e5319b02755ec9033204c2 444 Pfam PF16360 GTP-binding GTPase Middle Region 123 201 2.8E-30 T 29-03-2018 IPR032305 GTP-binding protein, middle domain CHH28_RS09475 292605cc03e5319b02755ec9033204c2 444 Gene3D G3DSA:3.40.50.300 241 392 2.7E-18 T 29-03-2018 CHH28_RS09475 292605cc03e5319b02755ec9033204c2 444 SUPERFAMILY SSF52540 206 381 5.22E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09475 292605cc03e5319b02755ec9033204c2 444 Pfam PF01926 50S ribosome-binding GTPase 209 327 1.0E-21 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS09475 292605cc03e5319b02755ec9033204c2 444 Gene3D G3DSA:3.40.50.300 174 240 2.4E-14 T 29-03-2018 CHH28_RS12410 b51f2f94d08cf8b9853e1f451b5fe5a9 303 Pfam PF07549 SecD/SecF GG Motif 27 53 8.3E-12 T 29-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CHH28_RS12410 b51f2f94d08cf8b9853e1f451b5fe5a9 303 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 2.5E-31 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CHH28_RS12410 b51f2f94d08cf8b9853e1f451b5fe5a9 303 PRINTS PR01755 Bacterial translocase SecF protein signature 31 46 2.5E-31 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CHH28_RS12410 b51f2f94d08cf8b9853e1f451b5fe5a9 303 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 2.5E-31 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CHH28_RS12410 b51f2f94d08cf8b9853e1f451b5fe5a9 303 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 2.5E-31 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CHH28_RS12410 b51f2f94d08cf8b9853e1f451b5fe5a9 303 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 32 277 9.5E-81 T 29-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CHH28_RS12410 b51f2f94d08cf8b9853e1f451b5fe5a9 303 Pfam PF02355 Protein export membrane protein 110 285 8.0E-67 T 29-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CHH28_RS12410 b51f2f94d08cf8b9853e1f451b5fe5a9 303 SUPERFAMILY SSF82866 96 284 7.19E-41 T 29-03-2018 CHH28_RS12410 b51f2f94d08cf8b9853e1f451b5fe5a9 303 Gene3D G3DSA:1.20.1640.10 68 285 9.2E-33 T 29-03-2018 CHH28_RS12410 b51f2f94d08cf8b9853e1f451b5fe5a9 303 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 4 288 29.232 T 29-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CHH28_RS12410 b51f2f94d08cf8b9853e1f451b5fe5a9 303 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 110 274 4.4E-55 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CHH28_RS00805 40b646cfe1e0a194ddcaa5b393035feb 539 Gene3D G3DSA:3.30.560.10 105 493 8.6E-85 T 29-03-2018 CHH28_RS00805 40b646cfe1e0a194ddcaa5b393035feb 539 Gene3D G3DSA:4.10.450.10 43 104 9.7E-29 T 29-03-2018 CHH28_RS00805 40b646cfe1e0a194ddcaa5b393035feb 539 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CHH28_RS00805 40b646cfe1e0a194ddcaa5b393035feb 539 Pfam PF00732 GMC oxidoreductase 5 295 5.1E-76 T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CHH28_RS00805 40b646cfe1e0a194ddcaa5b393035feb 539 Pfam PF05199 GMC oxidoreductase 392 529 1.5E-37 T 29-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 CHH28_RS00805 40b646cfe1e0a194ddcaa5b393035feb 539 SUPERFAMILY SSF54373 290 478 4.71E-39 T 29-03-2018 CHH28_RS00805 40b646cfe1e0a194ddcaa5b393035feb 539 PIRSF PIRSF000137 1 539 8.4E-139 T 29-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CHH28_RS00805 40b646cfe1e0a194ddcaa5b393035feb 539 Gene3D G3DSA:3.50.50.60 5 42 0.24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS00805 40b646cfe1e0a194ddcaa5b393035feb 539 SUPERFAMILY SSF51905 2 288 1.02E-86 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS00805 40b646cfe1e0a194ddcaa5b393035feb 539 SUPERFAMILY SSF51905 477 538 1.02E-86 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS00805 40b646cfe1e0a194ddcaa5b393035feb 539 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 254 268 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CHH28_RS17665 11efd79bf13c1ad6b68de76f78bd6ba2 890 SMART SM00434 11 499 6.9E-297 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS17665 11efd79bf13c1ad6b68de76f78bd6ba2 890 SUPERFAMILY SSF101904 533 852 1.31E-107 T 29-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CHH28_RS17665 11efd79bf13c1ad6b68de76f78bd6ba2 890 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 9 840 0.0 T 29-03-2018 CHH28_RS17665 11efd79bf13c1ad6b68de76f78bd6ba2 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 589 638 1.7E-11 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CHH28_RS17665 11efd79bf13c1ad6b68de76f78bd6ba2 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 3.1E-13 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CHH28_RS17665 11efd79bf13c1ad6b68de76f78bd6ba2 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 743 788 1.8E-11 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CHH28_RS17665 11efd79bf13c1ad6b68de76f78bd6ba2 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 585 3.5E-9 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CHH28_RS17665 11efd79bf13c1ad6b68de76f78bd6ba2 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 4.6E-12 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CHH28_RS17665 11efd79bf13c1ad6b68de76f78bd6ba2 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 7.5E-9 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CHH28_RS17665 11efd79bf13c1ad6b68de76f78bd6ba2 890 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 841 24.162 T 29-03-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS17665 11efd79bf13c1ad6b68de76f78bd6ba2 890 Gene3D G3DSA:1.10.268.10 377 497 2.8E-48 T 29-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS17665 11efd79bf13c1ad6b68de76f78bd6ba2 890 SUPERFAMILY SSF56719 30 522 4.05E-182 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CHH28_RS17665 11efd79bf13c1ad6b68de76f78bd6ba2 890 Gene3D G3DSA:3.90.199.10 34 285 4.8E-116 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS17665 11efd79bf13c1ad6b68de76f78bd6ba2 890 Gene3D G3DSA:2.120.10.90 530 841 1.8E-129 T 29-03-2018 CHH28_RS17665 11efd79bf13c1ad6b68de76f78bd6ba2 890 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 1.1E-153 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS17665 11efd79bf13c1ad6b68de76f78bd6ba2 890 Gene3D G3DSA:3.90.199.10 286 376 3.9E-9 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS06110 aa16448c0e15088da29edf1432b4fe30 144 Gene3D G3DSA:3.100.10.10 41 143 7.8E-23 T 29-03-2018 CHH28_RS06110 aa16448c0e15088da29edf1432b4fe30 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 5.6E-31 T 29-03-2018 IPR021131 Ribosomal protein L18e/L15P CHH28_RS06110 aa16448c0e15088da29edf1432b4fe30 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 19.009 T 29-03-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CHH28_RS06110 aa16448c0e15088da29edf1432b4fe30 144 SUPERFAMILY SSF52080 4 143 1.31E-44 T 29-03-2018 IPR021131 Ribosomal protein L18e/L15P CHH28_RS06110 aa16448c0e15088da29edf1432b4fe30 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 6.5E-47 T 29-03-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06110 aa16448c0e15088da29edf1432b4fe30 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 29-03-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS09665 c44bf8bcdef0b5d870b0e81ddb364852 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 6.2E-63 T 29-03-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CHH28_RS09665 c44bf8bcdef0b5d870b0e81ddb364852 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 3.0E-32 T 29-03-2018 CHH28_RS09665 c44bf8bcdef0b5d870b0e81ddb364852 163 Gene3D G3DSA:3.30.70.1150 88 160 8.1E-26 T 29-03-2018 CHH28_RS09665 c44bf8bcdef0b5d870b0e81ddb364852 163 SUPERFAMILY SSF55021 79 162 2.0E-25 T 29-03-2018 CHH28_RS09665 c44bf8bcdef0b5d870b0e81ddb364852 163 Pfam PF13710 ACT domain 12 72 4.1E-18 T 29-03-2018 CHH28_RS09665 c44bf8bcdef0b5d870b0e81ddb364852 163 SUPERFAMILY SSF55021 1 75 6.27E-23 T 29-03-2018 CHH28_RS09665 c44bf8bcdef0b5d870b0e81ddb364852 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 6.1E-25 T 29-03-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CHH28_RS09665 c44bf8bcdef0b5d870b0e81ddb364852 163 Gene3D G3DSA:3.30.70.260 1 87 2.6E-25 T 29-03-2018 CHH28_RS10990 eb635c0f96b0c566b79a4a213fd05460 1000 Pfam PF07715 TonB-dependent Receptor Plug Domain 219 318 3.4E-7 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS10990 eb635c0f96b0c566b79a4a213fd05460 1000 SUPERFAMILY SSF49464 115 190 1.7E-12 T 29-03-2018 IPR008969 Carboxypeptidase-like, regulatory domain CHH28_RS10990 eb635c0f96b0c566b79a4a213fd05460 1000 SUPERFAMILY SSF56935 522 999 1.08E-68 T 29-03-2018 CHH28_RS10990 eb635c0f96b0c566b79a4a213fd05460 1000 SUPERFAMILY SSF56935 201 342 1.08E-68 T 29-03-2018 CHH28_RS10990 eb635c0f96b0c566b79a4a213fd05460 1000 SUPERFAMILY SSF56935 424 492 1.08E-68 T 29-03-2018 CHH28_RS10990 eb635c0f96b0c566b79a4a213fd05460 1000 Pfam PF13620 Carboxypeptidase regulatory-like domain 116 192 8.5E-11 T 29-03-2018 CHH28_RS10990 eb635c0f96b0c566b79a4a213fd05460 1000 Gene3D G3DSA:2.40.170.20 312 1000 1.0E-49 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS10990 eb635c0f96b0c566b79a4a213fd05460 1000 Gene3D G3DSA:2.170.130.10 197 311 3.4E-10 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS10990 eb635c0f96b0c566b79a4a213fd05460 1000 Pfam PF00593 TonB dependent receptor 542 988 5.6E-33 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS10990 eb635c0f96b0c566b79a4a213fd05460 1000 Gene3D G3DSA:2.60.40.1120 112 196 1.2E-11 T 29-03-2018 CHH28_RS09520 129cdb79943b73e1c0dba2a5a71d7180 322 Pfam PF00348 Polyprenyl synthetase 31 270 2.0E-80 T 29-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 CHH28_RS09520 129cdb79943b73e1c0dba2a5a71d7180 322 SUPERFAMILY SSF48576 4 321 6.88E-101 T 29-03-2018 IPR008949 Isoprenoid synthase domain CHH28_RS09520 129cdb79943b73e1c0dba2a5a71d7180 322 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site CHH28_RS09520 129cdb79943b73e1c0dba2a5a71d7180 322 Gene3D G3DSA:1.10.600.10 1 322 1.8E-106 T 29-03-2018 IPR008949 Isoprenoid synthase domain CHH28_RS09520 129cdb79943b73e1c0dba2a5a71d7180 322 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site CHH28_RS16325 4b6d401e0fcfa84e00175bdce9b6603a 632 SUPERFAMILY SSF50956 310 629 1.83E-75 T 29-03-2018 CHH28_RS16325 4b6d401e0fcfa84e00175bdce9b6603a 632 Gene3D G3DSA:2.130.10.10 31 295 0.069 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS16325 4b6d401e0fcfa84e00175bdce9b6603a 632 Pfam PF02333 Phytase 306 629 5.6E-81 T 29-03-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 CHH28_RS16325 4b6d401e0fcfa84e00175bdce9b6603a 632 Gene3D G3DSA:2.120.10.30 305 632 2.8E-50 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CHH28_RS16325 4b6d401e0fcfa84e00175bdce9b6603a 632 SUPERFAMILY SSF50956 101 277 2.88E-18 T 29-03-2018 CHH28_RS18430 0f619a43646dd675c707d1b45b854286 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 670 6.8E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18430 0f619a43646dd675c707d1b45b854286 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 649 6.8E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18430 0f619a43646dd675c707d1b45b854286 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 635 6.8E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18430 0f619a43646dd675c707d1b45b854286 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 677 690 6.8E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18430 0f619a43646dd675c707d1b45b854286 698 Pfam PF02743 Cache domain 35 232 8.2E-12 T 29-03-2018 IPR033479 Double Cache domain 1 CHH28_RS18430 0f619a43646dd675c707d1b45b854286 698 SMART SM00387 581 693 1.3E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18430 0f619a43646dd675c707d1b45b854286 698 SUPERFAMILY SSF47384 450 498 1.45E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS18430 0f619a43646dd675c707d1b45b854286 698 Gene3D G3DSA:1.20.1170.10 306 435 2.3E-4 T 29-03-2018 CHH28_RS18430 0f619a43646dd675c707d1b45b854286 698 SUPERFAMILY SSF55874 540 691 1.24E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18430 0f619a43646dd675c707d1b45b854286 698 Gene3D G3DSA:3.30.565.10 549 693 2.7E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18430 0f619a43646dd675c707d1b45b854286 698 Gene3D G3DSA:3.30.450.20 196 305 8.9E-7 T 29-03-2018 CHH28_RS18430 0f619a43646dd675c707d1b45b854286 698 Gene3D G3DSA:1.10.287.130 436 548 9.4E-6 T 29-03-2018 CHH28_RS18430 0f619a43646dd675c707d1b45b854286 698 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 584 690 2.5E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18430 0f619a43646dd675c707d1b45b854286 698 Gene3D G3DSA:3.30.450.20 70 195 1.4E-13 T 29-03-2018 CHH28_RS05180 6e786525f1296f77a87788a950f43694 276 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 270 9.9E-20 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS05180 6e786525f1296f77a87788a950f43694 276 SMART SM00062 39 272 2.1E-5 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS05180 6e786525f1296f77a87788a950f43694 276 Gene3D G3DSA:3.40.190.10 32 145 1.7E-11 T 29-03-2018 CHH28_RS05180 6e786525f1296f77a87788a950f43694 276 Gene3D G3DSA:3.40.190.10 146 272 9.3E-8 T 29-03-2018 CHH28_RS05180 6e786525f1296f77a87788a950f43694 276 SUPERFAMILY SSF53850 32 270 4.34E-26 T 29-03-2018 CHH28_RS16610 cde99eff250fb39df687a3aeaed21d69 807 SMART SM00487 7 200 1.9E-19 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CHH28_RS16610 cde99eff250fb39df687a3aeaed21d69 807 SMART SM00490 227 324 3.9E-12 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS16610 cde99eff250fb39df687a3aeaed21d69 807 Pfam PF00270 DEAD/DEAH box helicase 18 164 2.5E-9 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CHH28_RS16610 cde99eff250fb39df687a3aeaed21d69 807 Gene3D G3DSA:3.40.50.300 4 164 2.1E-23 T 29-03-2018 CHH28_RS16610 cde99eff250fb39df687a3aeaed21d69 807 Pfam PF00271 Helicase conserved C-terminal domain 200 323 9.1E-13 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS16610 cde99eff250fb39df687a3aeaed21d69 807 SUPERFAMILY SSF52540 15 334 2.8E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS16610 cde99eff250fb39df687a3aeaed21d69 807 Gene3D G3DSA:3.40.50.300 181 345 5.1E-40 T 29-03-2018 CHH28_RS16610 cde99eff250fb39df687a3aeaed21d69 807 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 5 801 2.2E-260 T 29-03-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 CHH28_RS16610 cde99eff250fb39df687a3aeaed21d69 807 SMART SM00847 383 480 8.3E-5 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 CHH28_RS16610 cde99eff250fb39df687a3aeaed21d69 807 Pfam PF08482 ATP-dependent helicase C-terminal 664 793 1.7E-47 T 29-03-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal CHH28_RS16610 cde99eff250fb39df687a3aeaed21d69 807 PIRSF PIRSF005496 1 807 8.3E-271 T 29-03-2018 CHH28_RS16610 cde99eff250fb39df687a3aeaed21d69 807 Pfam PF04408 Helicase associated domain (HA2) 384 451 2.9E-9 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 CHH28_RS15095 53aa4c5bc35d2b5d37bb7fe547fed577 374 SUPERFAMILY SSF51735 4 150 2.19E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS15095 53aa4c5bc35d2b5d37bb7fe547fed577 374 PIRSF PIRSF000148 3 374 1.4E-69 T 29-03-2018 CHH28_RS15095 53aa4c5bc35d2b5d37bb7fe547fed577 374 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 4 371 7.4E-187 T 29-03-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CHH28_RS15095 53aa4c5bc35d2b5d37bb7fe547fed577 374 Gene3D G3DSA:3.40.50.720 2 147 1.2E-21 T 29-03-2018 CHH28_RS15095 53aa4c5bc35d2b5d37bb7fe547fed577 374 Gene3D G3DSA:3.30.360.10 148 354 1.8E-58 T 29-03-2018 CHH28_RS15095 53aa4c5bc35d2b5d37bb7fe547fed577 374 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 147 357 1.9E-55 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CHH28_RS15095 53aa4c5bc35d2b5d37bb7fe547fed577 374 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 124 9.0E-26 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CHH28_RS15095 53aa4c5bc35d2b5d37bb7fe547fed577 374 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 265 279 - T 29-03-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CHH28_RS15095 53aa4c5bc35d2b5d37bb7fe547fed577 374 SMART SM00859 5 125 4.9E-31 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CHH28_RS15095 53aa4c5bc35d2b5d37bb7fe547fed577 374 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 371 33.121 T 29-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CHH28_RS15095 53aa4c5bc35d2b5d37bb7fe547fed577 374 SUPERFAMILY SSF55347 137 358 1.18E-75 T 29-03-2018 CHH28_RS16775 a4ff4478cfc7f7174556efd1bab3d1f5 365 PIRSF PIRSF006487 1 363 2.3E-85 T 29-03-2018 CHH28_RS16775 a4ff4478cfc7f7174556efd1bab3d1f5 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 359 5.3E-128 T 29-03-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CHH28_RS16775 a4ff4478cfc7f7174556efd1bab3d1f5 365 SUPERFAMILY SSF101790 274 360 1.19E-26 T 29-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CHH28_RS16775 a4ff4478cfc7f7174556efd1bab3d1f5 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 257 2.3E-86 T 29-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal CHH28_RS16775 a4ff4478cfc7f7174556efd1bab3d1f5 365 Gene3D G3DSA:4.10.1250.10 235 278 1.2E-14 T 29-03-2018 CHH28_RS16775 a4ff4478cfc7f7174556efd1bab3d1f5 365 Gene3D G3DSA:3.30.1360.120 115 234 9.1E-29 T 29-03-2018 CHH28_RS16775 a4ff4478cfc7f7174556efd1bab3d1f5 365 Gene3D G3DSA:3.30.1360.120 3 114 7.3E-29 T 29-03-2018 CHH28_RS16775 a4ff4478cfc7f7174556efd1bab3d1f5 365 SUPERFAMILY SSF103025 3 280 1.07E-88 T 29-03-2018 CHH28_RS16775 a4ff4478cfc7f7174556efd1bab3d1f5 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 44.085 T 29-03-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CHH28_RS16775 a4ff4478cfc7f7174556efd1bab3d1f5 365 Gene3D G3DSA:2.40.30.110 281 361 6.8E-22 T 29-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CHH28_RS16775 a4ff4478cfc7f7174556efd1bab3d1f5 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 266 354 6.7E-18 T 29-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CHH28_RS09055 2a022a11cd16693b50d11e396d2b0106 190 SUPERFAMILY SSF53448 1 182 1.22E-23 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS09055 2a022a11cd16693b50d11e396d2b0106 190 Gene3D G3DSA:3.90.550.10 1 180 1.6E-29 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS09055 2a022a11cd16693b50d11e396d2b0106 190 Pfam PF12804 MobA-like NTP transferase domain 6 161 4.4E-36 T 29-03-2018 IPR025877 MobA-like NTP transferase CHH28_RS03695 4144b29e0da95a9c0ec8eaa4b4e7e456 248 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 159 175 1.1E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS03695 4144b29e0da95a9c0ec8eaa4b4e7e456 248 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 27 38 1.1E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS03695 4144b29e0da95a9c0ec8eaa4b4e7e456 248 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 126 139 1.1E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS03695 4144b29e0da95a9c0ec8eaa4b4e7e456 248 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 177 197 1.1E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS03695 4144b29e0da95a9c0ec8eaa4b4e7e456 248 Pfam PF13419 Haloacid dehalogenase-like hydrolase 30 216 4.6E-21 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS03695 4144b29e0da95a9c0ec8eaa4b4e7e456 248 Gene3D G3DSA:3.40.50.1000 9 242 9.5E-28 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS03695 4144b29e0da95a9c0ec8eaa4b4e7e456 248 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 210 4.6E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS03695 4144b29e0da95a9c0ec8eaa4b4e7e456 248 SUPERFAMILY SSF56784 27 237 3.46E-36 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS14135 03c7b15f8736436bb6aa8ffef4131fc9 155 Gene3D G3DSA:3.40.50.1240 1 145 1.4E-17 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CHH28_RS14135 03c7b15f8736436bb6aa8ffef4131fc9 155 SMART SM00855 2 109 8.8E-6 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CHH28_RS14135 03c7b15f8736436bb6aa8ffef4131fc9 155 SUPERFAMILY SSF53254 1 116 3.67E-18 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CHH28_RS14135 03c7b15f8736436bb6aa8ffef4131fc9 155 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 77 6.4E-12 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CHH28_RS14135 03c7b15f8736436bb6aa8ffef4131fc9 155 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 116 1.8E-26 T 29-03-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 SMART SM00493 3 143 8.6E-32 T 29-03-2018 IPR006171 TOPRIM domain CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 SUPERFAMILY SSF57783 752 813 5.78E-17 T 29-03-2018 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 Pfam PF08272 Topoisomerase I zinc-ribbon-like 832 870 3.8E-20 T 29-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 Pfam PF08272 Topoisomerase I zinc-ribbon-like 766 801 4.6E-12 T 29-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 Gene3D G3DSA:2.70.20.10 357 472 3.3E-37 T 29-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 Pfam PF01131 DNA topoisomerase 168 576 1.0E-125 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 SMART SM00436 144 232 9.7E-52 T 29-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 Gene3D G3DSA:1.10.460.10 473 589 1.2E-28 T 29-03-2018 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 Gene3D G3DSA:3.30.65.10 753 815 3.7E-9 T 29-03-2018 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 Gene3D G3DSA:3.30.65.10 590 657 1.0E-11 T 29-03-2018 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 Gene3D G3DSA:3.30.65.10 703 752 1.5E-9 T 29-03-2018 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 SUPERFAMILY SSF57783 817 872 4.42E-22 T 29-03-2018 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 Gene3D G3DSA:3.40.50.140 1 174 1.2E-50 T 29-03-2018 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 501 515 6.6E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 325 334 6.6E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 401 417 6.6E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 117 130 6.6E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 202 220 6.6E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 Gene3D G3DSA:2.20.25.10 817 871 2.1E-29 T 29-03-2018 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 Pfam PF01751 Toprim domain 5 153 1.6E-32 T 29-03-2018 IPR006171 TOPRIM domain CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 640 2.3E-246 T 29-03-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 SUPERFAMILY SSF57783 707 751 3.23E-7 T 29-03-2018 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 718 753 4.2E-9 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 605 630 8.6E-8 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 320 334 - T 29-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 SUPERFAMILY SSF56712 3 617 3.01E-200 T 29-03-2018 IPR023405 DNA topoisomerase, type IA, core domain CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 Gene3D G3DSA:1.10.460.10 175 356 1.5E-47 T 29-03-2018 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 SMART SM00437 283 538 1.6E-113 T 29-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CHH28_RS18335 c8bbbcca56352cab0fc8eb4d02a34ea2 884 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 731 54.482 T 29-03-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 CHH28_RS11440 ed4ef398c5178263d053f17d8b2cd49c 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 3.1E-22 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CHH28_RS11440 ed4ef398c5178263d053f17d8b2cd49c 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 3.1E-22 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CHH28_RS11440 ed4ef398c5178263d053f17d8b2cd49c 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 3.1E-22 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CHH28_RS11440 ed4ef398c5178263d053f17d8b2cd49c 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 3.1E-22 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CHH28_RS11440 ed4ef398c5178263d053f17d8b2cd49c 258 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 43.639 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CHH28_RS11440 ed4ef398c5178263d053f17d8b2cd49c 258 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CHH28_RS11440 ed4ef398c5178263d053f17d8b2cd49c 258 Gene3D G3DSA:3.90.230.10 2 257 1.7E-93 T 29-03-2018 CHH28_RS11440 ed4ef398c5178263d053f17d8b2cd49c 258 Pfam PF00557 Metallopeptidase family M24 12 242 1.5E-59 T 29-03-2018 IPR000994 Peptidase M24 CHH28_RS11440 ed4ef398c5178263d053f17d8b2cd49c 258 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 250 3.1E-104 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CHH28_RS11440 ed4ef398c5178263d053f17d8b2cd49c 258 SUPERFAMILY SSF55920 5 255 5.36E-98 T 29-03-2018 IPR000994 Peptidase M24 CHH28_RS08740 da2cb2c176c0669447098909c7ebf7f6 233 SUPERFAMILY SSF53448 4 226 9.01E-59 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS08740 da2cb2c176c0669447098909c7ebf7f6 233 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 226 2.9E-75 T 29-03-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CHH28_RS08740 da2cb2c176c0669447098909c7ebf7f6 233 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 2 225 40.334 T 29-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CHH28_RS08740 da2cb2c176c0669447098909c7ebf7f6 233 Gene3D G3DSA:3.90.550.10 1 232 7.5E-48 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS08740 da2cb2c176c0669447098909c7ebf7f6 233 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 224 1.0E-69 T 29-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CHH28_RS05740 86b3771b73a67c4ef605e7a1117f14d5 309 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 13 308 3.6E-136 T 29-03-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 CHH28_RS05740 86b3771b73a67c4ef605e7a1117f14d5 309 Gene3D G3DSA:3.30.470.10 2 144 2.4E-43 T 29-03-2018 CHH28_RS05740 86b3771b73a67c4ef605e7a1117f14d5 309 Pfam PF01063 Amino-transferase class IV 38 268 1.1E-54 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CHH28_RS05740 86b3771b73a67c4ef605e7a1117f14d5 309 Gene3D G3DSA:3.20.10.10 145 297 2.5E-51 T 29-03-2018 CHH28_RS05740 86b3771b73a67c4ef605e7a1117f14d5 309 ProSitePatterns PS00770 Aminotransferases class-IV signature. 196 224 - T 29-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 CHH28_RS05740 86b3771b73a67c4ef605e7a1117f14d5 309 SUPERFAMILY SSF56752 5 305 6.93E-105 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CHH28_RS08275 2c36fec3921008150f4413a71b60e26f 327 Pfam PF04463 Protein of unknown function (DUF523) 15 156 3.3E-32 T 29-03-2018 IPR007553 Domain of unknown function DUF523 CHH28_RS08275 2c36fec3921008150f4413a71b60e26f 327 Pfam PF08349 Protein of unknown function (DUF1722) 200 318 3.2E-42 T 29-03-2018 IPR013560 Domain of unknown function DUF1722 CHH28_RS08275 2c36fec3921008150f4413a71b60e26f 327 PIRSF PIRSF037004 6 327 2.8E-115 T 29-03-2018 IPR017087 Uncharacterised conserved protein UCP037004 CHH28_RS00175 550f3fc07047cc5076e306c08864b317 283 SUPERFAMILY SSF55060 162 277 9.11E-30 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CHH28_RS00175 550f3fc07047cc5076e306c08864b317 283 Pfam PF08544 GHMP kinases C terminal 202 263 2.0E-4 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CHH28_RS00175 550f3fc07047cc5076e306c08864b317 283 SUPERFAMILY SSF54211 6 158 1.29E-46 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS00175 550f3fc07047cc5076e306c08864b317 283 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 7 278 3.7E-82 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CHH28_RS00175 550f3fc07047cc5076e306c08864b317 283 Gene3D G3DSA:3.30.230.10 5 160 3.8E-47 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CHH28_RS00175 550f3fc07047cc5076e306c08864b317 283 Pfam PF00288 GHMP kinases N terminal domain 87 144 4.4E-10 T 29-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CHH28_RS00175 550f3fc07047cc5076e306c08864b317 283 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 5 272 32.618 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CHH28_RS00175 550f3fc07047cc5076e306c08864b317 283 Gene3D G3DSA:3.30.70.890 163 280 4.2E-20 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CHH28_RS00175 550f3fc07047cc5076e306c08864b317 283 PIRSF PIRSF010376 3 279 1.9E-82 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CHH28_RS13750 241f51cbfdbbea739215d4fd1a9f354e 266 SUPERFAMILY SSF52833 2 112 2.06E-23 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS13750 241f51cbfdbbea739215d4fd1a9f354e 266 Pfam PF00085 Thioredoxin 8 103 5.2E-18 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 CHH28_RS13750 241f51cbfdbbea739215d4fd1a9f354e 266 Gene3D G3DSA:1.25.40.10 134 195 0.059 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS13750 241f51cbfdbbea739215d4fd1a9f354e 266 Pfam PF14561 Tetratricopeptide repeat 179 264 9.0E-6 T 29-03-2018 CHH28_RS13750 241f51cbfdbbea739215d4fd1a9f354e 266 Gene3D G3DSA:3.40.30.10 1 133 4.8E-24 T 29-03-2018 CHH28_RS13750 241f51cbfdbbea739215d4fd1a9f354e 266 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CHH28_RS13750 241f51cbfdbbea739215d4fd1a9f354e 266 SUPERFAMILY SSF48452 147 264 2.78E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS13750 241f51cbfdbbea739215d4fd1a9f354e 266 Gene3D G3DSA:1.25.40.10 196 266 1.1E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 PRINTS PR00929 AT-hook-like domain signature 232 242 8.0E-8 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 PRINTS PR00929 AT-hook-like domain signature 268 278 8.0E-8 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 PRINTS PR00929 AT-hook-like domain signature 249 260 8.0E-8 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 SMART SM00384 270 282 1.3 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 SMART SM00384 232 244 0.61 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 SMART SM00384 308 320 1.3 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 SMART SM00384 251 263 1.3 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 SMART SM00384 194 206 110.0 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 SMART SM00384 213 225 0.7 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 SMART SM00384 289 301 1.3 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 SMART SM00384 328 340 0.92 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 Pfam PF02178 AT hook motif 213 224 0.18 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 Pfam PF02178 AT hook motif 328 339 0.21 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 Pfam PF02178 AT hook motif 270 281 0.48 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 Pfam PF02178 AT hook motif 308 319 0.48 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 Pfam PF02178 AT hook motif 289 300 0.48 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 Pfam PF02178 AT hook motif 251 262 0.48 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 Pfam PF02178 AT hook motif 198 205 21.0 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS11205 525835936fdd8c1346e1692d1c572212 360 Pfam PF02178 AT hook motif 232 243 0.15 T 29-03-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 CHH28_RS15020 101442d907e7e159a9016783736c6f23 324 Gene3D G3DSA:3.40.190.10 184 249 3.3E-17 T 29-03-2018 CHH28_RS15020 101442d907e7e159a9016783736c6f23 324 Pfam PF03466 LysR substrate binding domain 89 291 8.2E-36 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS15020 101442d907e7e159a9016783736c6f23 324 Gene3D G3DSA:3.40.190.10 92 183 2.9E-19 T 29-03-2018 CHH28_RS15020 101442d907e7e159a9016783736c6f23 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS15020 101442d907e7e159a9016783736c6f23 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS15020 101442d907e7e159a9016783736c6f23 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS15020 101442d907e7e159a9016783736c6f23 324 SUPERFAMILY SSF53850 90 321 4.54E-39 T 29-03-2018 CHH28_RS15020 101442d907e7e159a9016783736c6f23 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.0E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS15020 101442d907e7e159a9016783736c6f23 324 SUPERFAMILY SSF46785 1 89 1.84E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS15020 101442d907e7e159a9016783736c6f23 324 Gene3D G3DSA:1.10.10.10 1 91 8.6E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS15020 101442d907e7e159a9016783736c6f23 324 Gene3D G3DSA:3.40.190.10 250 324 0.012 T 29-03-2018 CHH28_RS17065 3d6395abe85c8dc2715cc3edd8b7058c 282 SUPERFAMILY SSF109604 12 277 1.29E-56 T 29-03-2018 CHH28_RS17065 3d6395abe85c8dc2715cc3edd8b7058c 282 Gene3D G3DSA:1.10.3210.10 3 266 2.9E-36 T 29-03-2018 CHH28_RS17065 3d6395abe85c8dc2715cc3edd8b7058c 282 Pfam PF08668 HDOD domain 18 212 1.2E-44 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD CHH28_RS15895 a9bd15d6232f521633e57efb786d204a 187 Pfam PF12915 Protein of unknown function (DUF3833) 12 177 2.6E-53 T 29-03-2018 IPR024409 Protein of unknown function DUF3833 CHH28_RS08345 1c6343e588807fa38c300f81654cd0a2 158 Gene3D G3DSA:3.30.70.920 62 155 1.2E-24 T 29-03-2018 CHH28_RS08345 1c6343e588807fa38c300f81654cd0a2 158 SMART SM00344 9 118 5.6E-44 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CHH28_RS08345 1c6343e588807fa38c300f81654cd0a2 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 1.9E-18 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS08345 1c6343e588807fa38c300f81654cd0a2 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 1.9E-18 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS08345 1c6343e588807fa38c300f81654cd0a2 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 1.9E-18 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS08345 1c6343e588807fa38c300f81654cd0a2 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 27 53 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CHH28_RS08345 1c6343e588807fa38c300f81654cd0a2 158 SUPERFAMILY SSF46785 9 67 1.6E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS08345 1c6343e588807fa38c300f81654cd0a2 158 Gene3D G3DSA:1.10.10.10 10 61 2.8E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS08345 1c6343e588807fa38c300f81654cd0a2 158 SUPERFAMILY SSF54909 71 158 1.61E-21 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CHH28_RS08345 1c6343e588807fa38c300f81654cd0a2 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 9 56 4.5E-19 T 29-03-2018 CHH28_RS08345 1c6343e588807fa38c300f81654cd0a2 158 Pfam PF01037 Lrp/AsnC ligand binding domain 75 149 3.1E-23 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CHH28_RS12140 6005adb22b1cb5007c01910e99f73899 266 Gene3D G3DSA:3.40.50.1860 119 260 3.1E-23 T 29-03-2018 CHH28_RS12140 6005adb22b1cb5007c01910e99f73899 266 TIGRFAM TIGR00067 glut_race: glutamate racemase 4 227 2.4E-56 T 29-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS12140 6005adb22b1cb5007c01910e99f73899 266 Gene3D G3DSA:3.40.50.1860 1 118 1.9E-25 T 29-03-2018 CHH28_RS12140 6005adb22b1cb5007c01910e99f73899 266 Hamap MF_00258 Glutamate racemase [murI]. 2 256 28.789 T 29-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS12140 6005adb22b1cb5007c01910e99f73899 266 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 69 77 - T 29-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS12140 6005adb22b1cb5007c01910e99f73899 266 SUPERFAMILY SSF53681 3 103 7.52E-29 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS12140 6005adb22b1cb5007c01910e99f73899 266 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 178 188 - T 29-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS12140 6005adb22b1cb5007c01910e99f73899 266 SUPERFAMILY SSF53681 109 219 6.54E-26 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS12140 6005adb22b1cb5007c01910e99f73899 266 Pfam PF01177 Asp/Glu/Hydantoin racemase 4 211 1.9E-28 T 29-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS11460 cd11e49b8f76c41f2911a0d278aac564 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.1E-71 T 29-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CHH28_RS11460 cd11e49b8f76c41f2911a0d278aac564 185 Gene3D G3DSA:1.10.132.20 2 73 9.2E-11 T 29-03-2018 CHH28_RS11460 cd11e49b8f76c41f2911a0d278aac564 185 Gene3D G3DSA:1.10.132.20 74 184 4.9E-40 T 29-03-2018 CHH28_RS11460 cd11e49b8f76c41f2911a0d278aac564 185 SUPERFAMILY SSF55194 1 185 3.79E-71 T 29-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CHH28_RS11460 cd11e49b8f76c41f2911a0d278aac564 185 Pfam PF01765 Ribosome recycling factor 22 183 5.2E-63 T 29-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CHH28_RS11460 cd11e49b8f76c41f2911a0d278aac564 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.19 T 29-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CHH28_RS14935 4f31f03d604a004f56ba4cbbacdd17ea 373 Gene3D G3DSA:1.10.230.10 237 311 3.8E-28 T 29-03-2018 IPR016143 Citrate synthase-like, small alpha subdomain CHH28_RS14935 4f31f03d604a004f56ba4cbbacdd17ea 373 SUPERFAMILY SSF48256 8 373 8.37E-123 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CHH28_RS14935 4f31f03d604a004f56ba4cbbacdd17ea 373 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 9 373 4.1E-152 T 29-03-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 CHH28_RS14935 4f31f03d604a004f56ba4cbbacdd17ea 373 Gene3D G3DSA:1.10.580.10 3 236 7.1E-76 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain CHH28_RS14935 4f31f03d604a004f56ba4cbbacdd17ea 373 Gene3D G3DSA:1.10.580.10 312 353 4.3E-8 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain CHH28_RS14935 4f31f03d604a004f56ba4cbbacdd17ea 373 PRINTS PR00143 Citrate synthase signature 249 269 1.5E-34 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CHH28_RS14935 4f31f03d604a004f56ba4cbbacdd17ea 373 PRINTS PR00143 Citrate synthase signature 174 189 1.5E-34 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CHH28_RS14935 4f31f03d604a004f56ba4cbbacdd17ea 373 PRINTS PR00143 Citrate synthase signature 326 340 1.5E-34 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CHH28_RS14935 4f31f03d604a004f56ba4cbbacdd17ea 373 PRINTS PR00143 Citrate synthase signature 196 224 1.5E-34 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CHH28_RS14935 4f31f03d604a004f56ba4cbbacdd17ea 373 PRINTS PR00143 Citrate synthase signature 124 137 1.5E-34 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CHH28_RS14935 4f31f03d604a004f56ba4cbbacdd17ea 373 PRINTS PR00143 Citrate synthase signature 306 322 1.5E-34 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CHH28_RS14935 4f31f03d604a004f56ba4cbbacdd17ea 373 Pfam PF00285 Citrate synthase, C-terminal domain 9 355 1.9E-114 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CHH28_RS14935 4f31f03d604a004f56ba4cbbacdd17ea 373 PIRSF PIRSF001369 2 373 4.4E-116 T 29-03-2018 IPR024176 Citrate synthase, bacterial-type CHH28_RS01450 54617d860783dd7eee02eb9b0fc8edf4 660 Gene3D G3DSA:1.20.1050.40 31 150 4.0E-15 T 29-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal CHH28_RS01450 54617d860783dd7eee02eb9b0fc8edf4 660 Gene3D G3DSA:1.10.1370.10 435 659 5.4E-49 T 29-03-2018 CHH28_RS01450 54617d860783dd7eee02eb9b0fc8edf4 660 Gene3D G3DSA:1.10.1370.10 151 434 2.0E-33 T 29-03-2018 CHH28_RS01450 54617d860783dd7eee02eb9b0fc8edf4 660 SUPERFAMILY SSF55486 34 656 8.15E-127 T 29-03-2018 CHH28_RS01450 54617d860783dd7eee02eb9b0fc8edf4 660 Pfam PF01432 Peptidase family M3 249 657 7.4E-99 T 29-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CHH28_RS07325 73dd128e3e664f7d296ba55210687bae 299 PRINTS PR00111 Alpha/beta hydrolase fold signature 121 134 7.6E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS07325 73dd128e3e664f7d296ba55210687bae 299 PRINTS PR00111 Alpha/beta hydrolase fold signature 243 257 7.6E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS07325 73dd128e3e664f7d296ba55210687bae 299 PRINTS PR00111 Alpha/beta hydrolase fold signature 135 148 7.6E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS07325 73dd128e3e664f7d296ba55210687bae 299 PRINTS PR00111 Alpha/beta hydrolase fold signature 77 92 7.6E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS07325 73dd128e3e664f7d296ba55210687bae 299 SUPERFAMILY SSF53474 29 297 1.24E-64 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS07325 73dd128e3e664f7d296ba55210687bae 299 Pfam PF12697 Alpha/beta hydrolase family 54 288 1.2E-20 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS07325 73dd128e3e664f7d296ba55210687bae 299 Gene3D G3DSA:3.40.50.1820 29 297 5.1E-52 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS03250 0280c334014183a840120a22865617c9 756 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 12 745 0.0 T 29-03-2018 CHH28_RS03250 0280c334014183a840120a22865617c9 756 Gene3D G3DSA:3.90.199.10 38 221 6.2E-75 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS03250 0280c334014183a840120a22865617c9 756 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 33.937 T 29-03-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS03250 0280c334014183a840120a22865617c9 756 Gene3D G3DSA:1.10.268.10 348 487 4.2E-44 T 29-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS03250 0280c334014183a840120a22865617c9 756 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 472 2.7E-133 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS03250 0280c334014183a840120a22865617c9 756 SUPERFAMILY SSF56719 35 487 2.09E-156 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CHH28_RS03250 0280c334014183a840120a22865617c9 756 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 650 683 2.0E-5 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CHH28_RS03250 0280c334014183a840120a22865617c9 756 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 599 642 0.12 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CHH28_RS03250 0280c334014183a840120a22865617c9 756 Gene3D G3DSA:2.120.10.90 499 756 9.6E-42 T 29-03-2018 CHH28_RS03250 0280c334014183a840120a22865617c9 756 Gene3D G3DSA:3.30.1360.40 242 335 3.3E-23 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CHH28_RS03250 0280c334014183a840120a22865617c9 756 SMART SM00434 15 465 1.1E-225 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS03250 0280c334014183a840120a22865617c9 756 SUPERFAMILY SSF101904 502 748 1.7E-51 T 29-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CHH28_RS14295 26c5102e99a2eb42d9b86e58a8f94aeb 233 PIRSF PIRSF037208 2 233 1.8E-66 T 29-03-2018 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic MetaCyc: PWY-7799 CHH28_RS14295 26c5102e99a2eb42d9b86e58a8f94aeb 233 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 233 32.754 T 29-03-2018 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic MetaCyc: PWY-7799 CHH28_RS14295 26c5102e99a2eb42d9b86e58a8f94aeb 233 Gene3D G3DSA:3.40.630.30 66 233 4.6E-9 T 29-03-2018 CHH28_RS14295 26c5102e99a2eb42d9b86e58a8f94aeb 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 14 83 2.0E-12 T 29-03-2018 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7799 CHH28_RS14295 26c5102e99a2eb42d9b86e58a8f94aeb 233 SUPERFAMILY SSF55729 73 231 1.09E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS14295 26c5102e99a2eb42d9b86e58a8f94aeb 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 103 224 9.8E-31 T 29-03-2018 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7799 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 29-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 SMART SM00387 32 176 4.1E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 Pfam PF01751 Toprim domain 420 532 5.6E-17 T 29-03-2018 IPR006171 TOPRIM domain CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR01159 DNA gyrase subunit B signature 6 16 1.1E-74 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR01159 DNA gyrase subunit B signature 196 209 1.1E-74 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR01159 DNA gyrase subunit B signature 181 196 1.1E-74 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 1.1E-74 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 1.1E-74 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 1.1E-74 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 1.1E-74 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 1.1E-74 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 1.1E-74 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 1.1E-74 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 794 7.0E-31 T 29-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 SUPERFAMILY SSF56719 395 561 1.12E-85 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 SUPERFAMILY SSF56719 731 796 1.12E-85 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 172 3.4E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 Gene3D G3DSA:3.30.565.10 3 225 2.0E-74 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 6 804 4.1E-301 T 29-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 Gene3D G3DSA:3.40.50.670 401 802 7.1E-108 T 29-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 SMART SM00433 36 798 4.1E-271 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 Pfam PF00204 DNA gyrase B 222 391 2.4E-57 T 29-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 SUPERFAMILY SSF55874 6 212 7.33E-75 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 3 805 101.887 T 29-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 SUPERFAMILY SSF54211 222 393 1.9E-57 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 Gene3D G3DSA:3.30.230.10 226 393 6.2E-61 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 2.2E-69 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 2.2E-69 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 2.2E-69 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 2.2E-69 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 2.2E-69 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR00418 DNA topoisomerase II family signature 114 128 2.2E-69 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 2.2E-69 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR00418 DNA topoisomerase II family signature 36 51 2.2E-69 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS04415 25e5666a76dfc3133b5a1443d57abe68 805 PRINTS PR00418 DNA topoisomerase II family signature 71 84 2.2E-69 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS06775 7179300fd05831622c6d32accfdfda48 601 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 41 156 9.3E-14 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS06775 7179300fd05831622c6d32accfdfda48 601 SUPERFAMILY SSF47203 286 461 5.32E-43 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS06775 7179300fd05831622c6d32accfdfda48 601 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 453 1.2E-19 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS06775 7179300fd05831622c6d32accfdfda48 601 SUPERFAMILY SSF56645 38 278 1.31E-58 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CHH28_RS06775 7179300fd05831622c6d32accfdfda48 601 Gene3D G3DSA:2.40.110.10 160 273 9.6E-25 T 29-03-2018 CHH28_RS06775 7179300fd05831622c6d32accfdfda48 601 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 35 7.1E-11 T 29-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CHH28_RS06775 7179300fd05831622c6d32accfdfda48 601 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 271 1.7E-18 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CHH28_RS06775 7179300fd05831622c6d32accfdfda48 601 Gene3D G3DSA:1.10.540.10 7 159 5.9E-18 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS06775 7179300fd05831622c6d32accfdfda48 601 Gene3D G3DSA:1.20.140.10 275 470 7.2E-38 T 29-03-2018 CHH28_RS06775 7179300fd05831622c6d32accfdfda48 601 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 473 594 1.3E-30 T 29-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CHH28_RS14850 aa2284592d85bc0baec3dd00c73b143b 336 Pfam PF13177 DNA polymerase III, delta subunit 6 164 2.3E-43 T 29-03-2018 CHH28_RS14850 aa2284592d85bc0baec3dd00c73b143b 336 Gene3D G3DSA:3.40.50.300 10 164 5.2E-21 T 29-03-2018 CHH28_RS14850 aa2284592d85bc0baec3dd00c73b143b 336 Gene3D G3DSA:1.20.272.10 208 332 8.8E-12 T 29-03-2018 CHH28_RS14850 aa2284592d85bc0baec3dd00c73b143b 336 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 243 324 1.1E-6 T 29-03-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS14850 aa2284592d85bc0baec3dd00c73b143b 336 Gene3D G3DSA:1.10.8.10 169 202 0.0013 T 29-03-2018 CHH28_RS14850 aa2284592d85bc0baec3dd00c73b143b 336 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 11 199 4.7E-61 T 29-03-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS14850 aa2284592d85bc0baec3dd00c73b143b 336 SUPERFAMILY SSF52540 4 204 8.06E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS01485 c8d7ba3325cb67c5f170b1091af3ee57 238 SUPERFAMILY SSF53850 14 234 2.86E-32 T 29-03-2018 CHH28_RS01485 c8d7ba3325cb67c5f170b1091af3ee57 238 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 236 6.2E-15 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS01485 c8d7ba3325cb67c5f170b1091af3ee57 238 Gene3D G3DSA:3.40.190.10 11 134 7.0E-12 T 29-03-2018 CHH28_RS01485 c8d7ba3325cb67c5f170b1091af3ee57 238 Gene3D G3DSA:3.40.190.10 135 238 4.2E-8 T 29-03-2018 CHH28_RS14955 759086f489819994f372ba88e82684a9 207 Gene3D G3DSA:3.40.50.720 1 206 4.2E-10 T 29-03-2018 CHH28_RS14955 759086f489819994f372ba88e82684a9 207 SUPERFAMILY SSF51735 1 194 3.43E-29 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS09445 de2aa317bbe7558c7a2587923536220f 506 Gene3D G3DSA:3.40.50.10260 1 225 1.2E-57 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CHH28_RS09445 de2aa317bbe7558c7a2587923536220f 506 Pfam PF03853 YjeF-related protein N-terminus 38 196 2.9E-39 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CHH28_RS09445 de2aa317bbe7558c7a2587923536220f 506 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 236 504 8.1E-73 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CHH28_RS09445 de2aa317bbe7558c7a2587923536220f 506 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 17 217 22.576 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CHH28_RS09445 de2aa317bbe7558c7a2587923536220f 506 Pfam PF01256 Carbohydrate kinase 259 500 2.6E-61 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CHH28_RS09445 de2aa317bbe7558c7a2587923536220f 506 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 16 216 2.6E-40 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CHH28_RS09445 de2aa317bbe7558c7a2587923536220f 506 SUPERFAMILY SSF53613 242 503 1.08E-71 T 29-03-2018 IPR029056 Ribokinase-like CHH28_RS09445 de2aa317bbe7558c7a2587923536220f 506 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 235 505 21.961 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CHH28_RS09445 de2aa317bbe7558c7a2587923536220f 506 Gene3D G3DSA:3.40.1190.20 228 505 1.4E-48 T 29-03-2018 IPR029056 Ribokinase-like CHH28_RS09445 de2aa317bbe7558c7a2587923536220f 506 SUPERFAMILY SSF64153 15 257 1.03E-55 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CHH28_RS09445 de2aa317bbe7558c7a2587923536220f 506 PIRSF PIRSF017184 13 505 1.4E-129 T 29-03-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 CHH28_RS09445 de2aa317bbe7558c7a2587923536220f 506 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 444 454 - T 29-03-2018 IPR017953 Carbohydrate kinase, predicted, conserved site CHH28_RS12265 93ab4b6f5f8cdf5a8d9718d590cdc542 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 53.034 T 29-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CHH28_RS12265 93ab4b6f5f8cdf5a8d9718d590cdc542 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 5.9E-25 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CHH28_RS12265 93ab4b6f5f8cdf5a8d9718d590cdc542 649 Gene3D G3DSA:3.30.300.30 519 649 1.4E-26 T 29-03-2018 CHH28_RS12265 93ab4b6f5f8cdf5a8d9718d590cdc542 649 Pfam PF00501 AMP-binding enzyme 84 523 4.8E-92 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CHH28_RS12265 93ab4b6f5f8cdf5a8d9718d590cdc542 649 Gene3D G3DSA:3.40.50.980 75 267 4.4E-54 T 29-03-2018 CHH28_RS12265 93ab4b6f5f8cdf5a8d9718d590cdc542 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 82 5.5E-21 T 29-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CHH28_RS12265 93ab4b6f5f8cdf5a8d9718d590cdc542 649 Gene3D G3DSA:2.30.38.10 429 516 4.5E-12 T 29-03-2018 CHH28_RS12265 93ab4b6f5f8cdf5a8d9718d590cdc542 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 262 273 - T 29-03-2018 IPR020845 AMP-binding, conserved site CHH28_RS12265 93ab4b6f5f8cdf5a8d9718d590cdc542 649 SUPERFAMILY SSF56801 8 643 3.79E-187 T 29-03-2018 CHH28_RS12265 93ab4b6f5f8cdf5a8d9718d590cdc542 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 0.0 T 29-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CHH28_RS12265 93ab4b6f5f8cdf5a8d9718d590cdc542 649 Gene3D G3DSA:3.40.50.980 268 428 5.7E-36 T 29-03-2018 CHH28_RS10180 019cc7349283c19937d00fb4022aa5f8 262 Gene3D G3DSA:3.40.1280.10 1 173 2.9E-68 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CHH28_RS10180 019cc7349283c19937d00fb4022aa5f8 262 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 237 4.5E-98 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CHH28_RS10180 019cc7349283c19937d00fb4022aa5f8 262 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 262 111.1 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CHH28_RS10180 019cc7349283c19937d00fb4022aa5f8 262 SUPERFAMILY SSF75217 2 249 7.19E-98 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CHH28_RS10180 019cc7349283c19937d00fb4022aa5f8 262 PIRSF PIRSF000386 1 258 9.4E-99 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CHH28_RS10180 019cc7349283c19937d00fb4022aa5f8 262 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 225 1.5E-63 T 29-03-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CHH28_RS10180 019cc7349283c19937d00fb4022aa5f8 262 Gene3D G3DSA:1.10.1270.20 174 259 1.0E-35 T 29-03-2018 CHH28_RS05310 c813bc142d822c8e88837c6eaa0826d5 438 PIRSF PIRSF006603 1 428 1.5E-90 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CHH28_RS05310 c813bc142d822c8e88837c6eaa0826d5 438 Pfam PF01554 MatE 224 385 4.2E-22 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CHH28_RS05310 c813bc142d822c8e88837c6eaa0826d5 438 Pfam PF01554 MatE 3 160 9.6E-29 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CHH28_RS05310 c813bc142d822c8e88837c6eaa0826d5 438 TIGRFAM TIGR00797 matE: MATE efflux family protein 2 387 1.0E-52 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CHH28_RS00335 07dc01b35d887aa07b309c2ccf519d44 576 Pfam PF03717 Penicillin-binding Protein dimerisation domain 58 207 7.5E-18 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CHH28_RS00335 07dc01b35d887aa07b309c2ccf519d44 576 SUPERFAMILY SSF56519 51 222 3.79E-42 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CHH28_RS00335 07dc01b35d887aa07b309c2ccf519d44 576 Gene3D G3DSA:3.90.1310.10 27 222 7.6E-42 T 29-03-2018 CHH28_RS00335 07dc01b35d887aa07b309c2ccf519d44 576 SUPERFAMILY SSF56601 173 561 4.31E-97 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS00335 07dc01b35d887aa07b309c2ccf519d44 576 Pfam PF00905 Penicillin binding protein transpeptidase domain 247 544 1.4E-76 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CHH28_RS00335 07dc01b35d887aa07b309c2ccf519d44 576 Gene3D G3DSA:3.40.710.10 223 575 6.9E-90 T 29-03-2018 CHH28_RS11475 1007eafaa5091b97704856a9a05825f9 402 PIRSF PIRSF006205 1 395 1.4E-157 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CHH28_RS11475 1007eafaa5091b97704856a9a05825f9 402 Gene3D G3DSA:3.40.50.720 1 153 1.2E-51 T 29-03-2018 CHH28_RS11475 1007eafaa5091b97704856a9a05825f9 402 Pfam PF13288 DXP reductoisomerase C-terminal domain 269 385 9.3E-45 T 29-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CHH28_RS11475 1007eafaa5091b97704856a9a05825f9 402 SUPERFAMILY SSF51735 2 153 1.2E-47 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS11475 1007eafaa5091b97704856a9a05825f9 402 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 135 7.0E-47 T 29-03-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CHH28_RS11475 1007eafaa5091b97704856a9a05825f9 402 SUPERFAMILY SSF69055 300 391 5.89E-33 T 29-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CHH28_RS11475 1007eafaa5091b97704856a9a05825f9 402 SUPERFAMILY SSF55347 129 272 5.89E-60 T 29-03-2018 CHH28_RS11475 1007eafaa5091b97704856a9a05825f9 402 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 390 47.394 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CHH28_RS11475 1007eafaa5091b97704856a9a05825f9 402 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 149 237 2.8E-37 T 29-03-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CHH28_RS11475 1007eafaa5091b97704856a9a05825f9 402 Gene3D G3DSA:1.10.1740.10 310 394 1.9E-31 T 29-03-2018 CHH28_RS11475 1007eafaa5091b97704856a9a05825f9 402 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 387 8.5E-162 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CHH28_RS03525 a448d15c99a3446379bce64aa75d7aed 259 Gene3D G3DSA:3.40.50.300 21 92 1.9E-13 T 29-03-2018 CHH28_RS03525 a448d15c99a3446379bce64aa75d7aed 259 Gene3D G3DSA:3.40.50.300 93 255 6.1E-15 T 29-03-2018 CHH28_RS03525 a448d15c99a3446379bce64aa75d7aed 259 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 25 209 4.8E-16 T 29-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CHH28_RS03525 a448d15c99a3446379bce64aa75d7aed 259 SUPERFAMILY SSF52540 22 233 2.75E-32 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS01825 baaa31871e8cf1babafc2280829037f0 395 SUPERFAMILY SSF55681 155 344 1.24E-53 T 29-03-2018 CHH28_RS01825 baaa31871e8cf1babafc2280829037f0 395 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 161 391 1.1E-56 T 29-03-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 CHH28_RS01825 baaa31871e8cf1babafc2280829037f0 395 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 78 392 30.879 T 29-03-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 CHH28_RS01825 baaa31871e8cf1babafc2280829037f0 395 SUPERFAMILY SSF50037 347 392 7.32E-8 T 29-03-2018 IPR008988 Transcriptional repressor, C-terminal CHH28_RS01825 baaa31871e8cf1babafc2280829037f0 395 Gene3D G3DSA:1.10.10.10 78 136 1.1E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS01825 baaa31871e8cf1babafc2280829037f0 395 Gene3D G3DSA:2.30.30.100 346 392 9.2E-12 T 29-03-2018 CHH28_RS01825 baaa31871e8cf1babafc2280829037f0 395 Pfam PF03099 Biotin/lipoate A/B protein ligase family 162 283 2.1E-15 T 29-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CHH28_RS01825 baaa31871e8cf1babafc2280829037f0 395 Gene3D G3DSA:3.30.930.10 138 345 3.4E-56 T 29-03-2018 CHH28_RS01825 baaa31871e8cf1babafc2280829037f0 395 Pfam PF02237 Biotin protein ligase C terminal domain 348 392 1.2E-5 T 29-03-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 CHH28_RS01825 baaa31871e8cf1babafc2280829037f0 395 Pfam PF08279 HTH domain 79 131 3.4E-11 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 CHH28_RS01825 baaa31871e8cf1babafc2280829037f0 395 SUPERFAMILY SSF46785 80 132 6.48E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS14760 641801b7ab9483abda55fc06211b03ef 489 SUPERFAMILY SSF143437 1 178 2.96E-38 T 29-03-2018 CHH28_RS14760 641801b7ab9483abda55fc06211b03ef 489 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 374 3.7E-100 T 29-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 CHH28_RS14760 641801b7ab9483abda55fc06211b03ef 489 Pfam PF02926 THUMP domain 47 166 6.6E-15 T 29-03-2018 IPR004114 THUMP domain GO:0003723 CHH28_RS14760 641801b7ab9483abda55fc06211b03ef 489 Gene3D G3DSA:3.30.2300.10 93 167 7.2E-15 T 29-03-2018 CHH28_RS14760 641801b7ab9483abda55fc06211b03ef 489 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 388 478 2.5E-27 T 29-03-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 CHH28_RS14760 641801b7ab9483abda55fc06211b03ef 489 Gene3D G3DSA:3.40.50.620 180 389 5.4E-25 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS14760 641801b7ab9483abda55fc06211b03ef 489 SMART SM00981 80 170 2.3E-15 T 29-03-2018 IPR004114 THUMP domain GO:0003723 CHH28_RS14760 641801b7ab9483abda55fc06211b03ef 489 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 180 373 4.3E-62 T 29-03-2018 IPR020536 Thil, AANH domain GO:0004810 CHH28_RS14760 641801b7ab9483abda55fc06211b03ef 489 Gene3D G3DSA:3.30.70.1510 2 87 1.0E-16 T 29-03-2018 CHH28_RS14760 641801b7ab9483abda55fc06211b03ef 489 SUPERFAMILY SSF52821 405 485 3.36E-5 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS14760 641801b7ab9483abda55fc06211b03ef 489 SUPERFAMILY SSF52402 179 378 3.09E-39 T 29-03-2018 CHH28_RS14760 641801b7ab9483abda55fc06211b03ef 489 Gene3D G3DSA:3.40.250.10 401 488 2.7E-4 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS14760 641801b7ab9483abda55fc06211b03ef 489 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 489 160.67 T 29-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 CHH28_RS06500 27320fa50bc5d6c4dbbaa0439d5878dd 589 SUPERFAMILY SSF90123 3 316 2.09E-74 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS06500 27320fa50bc5d6c4dbbaa0439d5878dd 589 Pfam PF00005 ABC transporter 366 515 4.4E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS06500 27320fa50bc5d6c4dbbaa0439d5878dd 589 Gene3D G3DSA:1.20.1560.10 1 322 1.5E-64 T 29-03-2018 CHH28_RS06500 27320fa50bc5d6c4dbbaa0439d5878dd 589 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 2 586 1.9E-239 T 29-03-2018 IPR011918 ABC transporter, ATP-binding/permease protein CHH28_RS06500 27320fa50bc5d6c4dbbaa0439d5878dd 589 SMART SM00382 375 561 3.8E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS06500 27320fa50bc5d6c4dbbaa0439d5878dd 589 Pfam PF00664 ABC transporter transmembrane region 16 285 3.3E-47 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS06500 27320fa50bc5d6c4dbbaa0439d5878dd 589 SUPERFAMILY SSF52540 348 586 1.23E-88 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS06500 27320fa50bc5d6c4dbbaa0439d5878dd 589 Gene3D G3DSA:3.40.50.300 332 589 1.0E-75 T 29-03-2018 CHH28_RS06500 27320fa50bc5d6c4dbbaa0439d5878dd 589 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS15285 f55e060129c4e668f2fddaff9310a678 183 Pfam PF00857 Isochorismatase family 12 160 5.2E-28 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CHH28_RS15285 f55e060129c4e668f2fddaff9310a678 183 SUPERFAMILY SSF52499 4 183 1.31E-44 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CHH28_RS15285 f55e060129c4e668f2fddaff9310a678 183 Gene3D G3DSA:3.40.50.850 2 183 1.6E-36 T 29-03-2018 CHH28_RS02375 f6ecad3a5fcf7c78c18e66e62e15ed16 436 Pfam PF07690 Major Facilitator Superfamily 40 357 4.2E-10 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CHH28_RS02375 f6ecad3a5fcf7c78c18e66e62e15ed16 436 Gene3D G3DSA:1.20.1250.20 240 436 2.6E-12 T 29-03-2018 CHH28_RS02375 f6ecad3a5fcf7c78c18e66e62e15ed16 436 Gene3D G3DSA:1.20.1250.20 35 229 9.0E-9 T 29-03-2018 CHH28_RS02375 f6ecad3a5fcf7c78c18e66e62e15ed16 436 SUPERFAMILY SSF103473 36 432 1.57E-21 T 29-03-2018 IPR020846 Major facilitator superfamily domain CHH28_RS10685 79917f72ead363ba4a629ac3bb75cc32 320 SUPERFAMILY SSF50630 51 148 3.2E-6 T 29-03-2018 IPR021109 Aspartic peptidase domain CHH28_RS10685 79917f72ead363ba4a629ac3bb75cc32 320 Pfam PF13650 Aspartyl protease 55 139 2.4E-6 T 29-03-2018 CHH28_RS10685 79917f72ead363ba4a629ac3bb75cc32 320 Pfam PF13650 Aspartyl protease 188 298 1.3E-9 T 29-03-2018 CHH28_RS10685 79917f72ead363ba4a629ac3bb75cc32 320 Gene3D G3DSA:2.40.70.10 173 308 1.1E-12 T 29-03-2018 IPR021109 Aspartic peptidase domain CHH28_RS10685 79917f72ead363ba4a629ac3bb75cc32 320 Gene3D G3DSA:2.40.70.10 48 172 6.4E-16 T 29-03-2018 IPR021109 Aspartic peptidase domain CHH28_RS08475 ff42a4341930d07931bb73a0479b14fd 414 SUPERFAMILY SSF103473 6 389 3.92E-28 T 29-03-2018 IPR020846 Major facilitator superfamily domain CHH28_RS08475 ff42a4341930d07931bb73a0479b14fd 414 Gene3D G3DSA:1.20.1250.20 204 390 4.2E-14 T 29-03-2018 CHH28_RS08475 ff42a4341930d07931bb73a0479b14fd 414 Pfam PF07690 Major Facilitator Superfamily 6 350 1.9E-18 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CHH28_RS08475 ff42a4341930d07931bb73a0479b14fd 414 Gene3D G3DSA:1.20.1250.20 4 180 2.0E-10 T 29-03-2018 CHH28_RS03640 14209c2759c2ac8fae8478950078ac1c 491 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 59 467 4.8E-23 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CHH28_RS03640 14209c2759c2ac8fae8478950078ac1c 491 SUPERFAMILY SSF53590 216 427 8.72E-20 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CHH28_RS03640 14209c2759c2ac8fae8478950078ac1c 491 SUPERFAMILY SSF53590 55 117 8.72E-20 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CHH28_RS03640 14209c2759c2ac8fae8478950078ac1c 491 Gene3D G3DSA:3.90.245.10 33 480 1.0E-33 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CHH28_RS09340 b0717a34d6454888cfd57c910e114021 941 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.632 T 29-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CHH28_RS09340 b0717a34d6454888cfd57c910e114021 941 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS09340 b0717a34d6454888cfd57c910e114021 941 Gene3D G3DSA:3.40.50.300 416 610 2.1E-22 T 29-03-2018 CHH28_RS09340 b0717a34d6454888cfd57c910e114021 941 SUPERFAMILY SSF52540 613 913 1.09E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09340 b0717a34d6454888cfd57c910e114021 941 Gene3D G3DSA:1.10.8.280 285 405 5.4E-41 T 29-03-2018 CHH28_RS09340 b0717a34d6454888cfd57c910e114021 941 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 925 0.0 T 29-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CHH28_RS09340 b0717a34d6454888cfd57c910e114021 941 Gene3D G3DSA:3.40.50.300 611 940 1.3E-53 T 29-03-2018 CHH28_RS09340 b0717a34d6454888cfd57c910e114021 941 Gene3D G3DSA:3.40.50.300 35 112 5.6E-4 T 29-03-2018 CHH28_RS09340 b0717a34d6454888cfd57c910e114021 941 Gene3D G3DSA:3.30.190.20 127 248 1.9E-39 T 29-03-2018 CHH28_RS09340 b0717a34d6454888cfd57c910e114021 941 Gene3D G3DSA:3.40.50.300 6 34 0.013 T 29-03-2018 CHH28_RS09340 b0717a34d6454888cfd57c910e114021 941 SUPERFAMILY SSF52540 1 204 2.28E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09340 b0717a34d6454888cfd57c910e114021 941 SUPERFAMILY SSF52540 430 569 2.28E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09340 b0717a34d6454888cfd57c910e114021 941 Pfam PF00005 ABC transporter 623 860 8.3E-10 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS09340 b0717a34d6454888cfd57c910e114021 941 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 Gene3D G3DSA:3.90.1100.10 382 649 3.0E-78 T 29-03-2018 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 Gene3D G3DSA:3.90.1100.10 650 718 1.2E-15 T 29-03-2018 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 Gene3D G3DSA:3.90.1100.10 18 247 1.5E-50 T 29-03-2018 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 SUPERFAMILY SSF64484 1056 1357 0.0 T 29-03-2018 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 SUPERFAMILY SSF64484 348 944 0.0 T 29-03-2018 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 SUPERFAMILY SSF64484 12 231 0.0 T 29-03-2018 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 Gene3D G3DSA:3.90.1800.10 1283 1325 1.1E-11 T 29-03-2018 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 Gene3D G3DSA:2.40.50.150 834 1062 1.1E-51 T 29-03-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 Pfam PF04561 RNA polymerase Rpb2, domain 2 156 228 1.4E-7 T 29-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 Pfam PF04561 RNA polymerase Rpb2, domain 2 361 459 1.5E-16 T 29-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 Pfam PF04565 RNA polymerase Rpb2, domain 3 518 585 5.4E-30 T 29-03-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 Pfam PF04560 RNA polymerase Rpb2, domain 7 1282 1356 8.3E-27 T 29-03-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 Gene3D G3DSA:2.40.50.100 720 800 3.2E-28 T 29-03-2018 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1080 1092 - T 29-03-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 Gene3D G3DSA:2.40.270.10 1063 1258 3.1E-77 T 29-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 Pfam PF04563 RNA polymerase beta subunit 26 504 2.6E-44 T 29-03-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1358 12.31 T 29-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 Pfam PF00562 RNA polymerase Rpb2, domain 6 722 1280 1.1E-157 T 29-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1355 0.0 T 29-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS05980 e43fbf5ae9951ddc450ee6700bc8501e 1358 Pfam PF10385 RNA polymerase beta subunit external 1 domain 596 661 7.6E-18 T 29-03-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS16700 a6ba829b186ae24a9848b2d2e03d0472 270 Gene3D G3DSA:1.10.10.60 213 265 1.1E-11 T 29-03-2018 CHH28_RS16700 a6ba829b186ae24a9848b2d2e03d0472 270 Pfam PF12833 Helix-turn-helix domain 187 257 2.2E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS16700 a6ba829b186ae24a9848b2d2e03d0472 270 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 211 253 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CHH28_RS16700 a6ba829b186ae24a9848b2d2e03d0472 270 SMART SM00342 174 257 2.7E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS16700 a6ba829b186ae24a9848b2d2e03d0472 270 Gene3D G3DSA:1.10.10.60 150 212 1.3E-6 T 29-03-2018 CHH28_RS16700 a6ba829b186ae24a9848b2d2e03d0472 270 SUPERFAMILY SSF46689 210 256 3.72E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS06625 784efe8578c48af9f237b2b2cc3a7eb7 446 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 446 2.0E-218 T 29-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CHH28_RS06625 784efe8578c48af9f237b2b2cc3a7eb7 446 Pfam PF07724 AAA domain (Cdc48 subfamily) 173 333 4.4E-42 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CHH28_RS06625 784efe8578c48af9f237b2b2cc3a7eb7 446 Gene3D G3DSA:1.10.8.10 118 203 7.1E-32 T 29-03-2018 CHH28_RS06625 784efe8578c48af9f237b2b2cc3a7eb7 446 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 136 1.2E-7 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CHH28_RS06625 784efe8578c48af9f237b2b2cc3a7eb7 446 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 446 43.032 T 29-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CHH28_RS06625 784efe8578c48af9f237b2b2cc3a7eb7 446 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 339 408 8.1E-6 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CHH28_RS06625 784efe8578c48af9f237b2b2cc3a7eb7 446 Gene3D G3DSA:3.40.50.300 46 117 5.4E-5 T 29-03-2018 CHH28_RS06625 784efe8578c48af9f237b2b2cc3a7eb7 446 SMART SM00382 49 336 1.9E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS06625 784efe8578c48af9f237b2b2cc3a7eb7 446 SMART SM01086 339 437 1.0E-20 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CHH28_RS06625 784efe8578c48af9f237b2b2cc3a7eb7 446 Gene3D G3DSA:1.10.8.10 204 246 2.4E-15 T 29-03-2018 CHH28_RS06625 784efe8578c48af9f237b2b2cc3a7eb7 446 Gene3D G3DSA:1.10.8.60 339 434 1.8E-26 T 29-03-2018 CHH28_RS06625 784efe8578c48af9f237b2b2cc3a7eb7 446 SUPERFAMILY SSF52540 3 443 6.12E-93 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS01380 57326d091e870752ca22f8f7b7dc8415 399 Gene3D G3DSA:3.40.50.10070 114 279 2.8E-5 T 29-03-2018 CHH28_RS01380 57326d091e870752ca22f8f7b7dc8415 399 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 322 397 1.4E-18 T 29-03-2018 IPR032388 Flagellar assembly protein T, C-terminal CHH28_RS01380 57326d091e870752ca22f8f7b7dc8415 399 Pfam PF16539 Flagellar assembly protein T, middle domain 115 275 1.4E-36 T 29-03-2018 IPR032386 Flagellar assembly protein T, middle domain CHH28_RS01380 57326d091e870752ca22f8f7b7dc8415 399 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 23 107 4.0E-12 T 29-03-2018 IPR032370 Flagellar assembly protein T, N-terminal CHH28_RS05145 332643557f23a691269f856c54605f1b 109 Gene3D G3DSA:3.30.70.1240 1 108 3.2E-33 T 29-03-2018 IPR023389 DOPA-like domain CHH28_RS05145 332643557f23a691269f856c54605f1b 109 Pfam PF08883 Dopa 4,5-dioxygenase family 6 106 4.7E-29 T 29-03-2018 IPR014980 Dopa 4,5-dioxygenase CHH28_RS05145 332643557f23a691269f856c54605f1b 109 SUPERFAMILY SSF143410 4 108 9.42E-33 T 29-03-2018 IPR023389 DOPA-like domain CHH28_RS05145 332643557f23a691269f856c54605f1b 109 PIRSF PIRSF028139 2 109 1.2E-36 T 29-03-2018 IPR014980 Dopa 4,5-dioxygenase CHH28_RS01075 ec30e66a9632e71b0ba88b038fb0d88e 515 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS01075 ec30e66a9632e71b0ba88b038fb0d88e 515 SUPERFAMILY SSF52540 257 480 3.43E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS01075 ec30e66a9632e71b0ba88b038fb0d88e 515 Gene3D G3DSA:3.40.50.300 252 488 3.6E-26 T 29-03-2018 CHH28_RS01075 ec30e66a9632e71b0ba88b038fb0d88e 515 SUPERFAMILY SSF52540 7 227 9.24E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS01075 ec30e66a9632e71b0ba88b038fb0d88e 515 Gene3D G3DSA:3.40.50.300 4 251 5.0E-54 T 29-03-2018 CHH28_RS01075 ec30e66a9632e71b0ba88b038fb0d88e 515 SMART SM00382 31 219 6.3E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS01075 ec30e66a9632e71b0ba88b038fb0d88e 515 Pfam PF00005 ABC transporter 274 429 4.2E-12 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS01075 ec30e66a9632e71b0ba88b038fb0d88e 515 Pfam PF00005 ABC transporter 24 169 2.8E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS01075 ec30e66a9632e71b0ba88b038fb0d88e 515 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 SUPERFAMILY SSF52156 615 743 1.96E-35 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 Pfam PF00009 Elongation factor Tu GTP binding domain 340 497 5.8E-35 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 SUPERFAMILY SSF46955 3 51 4.39E-9 T 29-03-2018 IPR009061 Putative DNA-binding domain CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 Gene3D G3DSA:2.40.30.10 509 637 3.0E-30 T 29-03-2018 CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 SUPERFAMILY SSF52540 333 505 2.65E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 252 836 5.0E-261 T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 Pfam PF11987 Translation-initiation factor 2 622 726 1.0E-34 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 97 3.9E-11 T 29-03-2018 IPR013575 Initiation factor 2 associated domain, bacterial CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 Gene3D G3DSA:3.40.50.300 321 507 2.1E-40 T 29-03-2018 CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 834 17.342 T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 SUPERFAMILY SSF50447 509 592 7.28E-25 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 Gene3D G3DSA:3.30.56.50 262 303 2.7E-12 T 29-03-2018 CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 Gene3D G3DSA:3.30.56.50 4 46 1.2E-9 T 29-03-2018 CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 Gene3D G3DSA:2.40.30.10 737 835 1.6E-27 T 29-03-2018 CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 SUPERFAMILY SSF50447 738 834 7.66E-31 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 ProSitePatterns PS01176 Initiation factor 2 signature. 787 809 - T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 339 495 5.7E-31 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 260 310 4.2E-18 T 29-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 47 3.7E-6 T 29-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal CHH28_RS00450 13d962afda88dd583abc577ed65e6cc9 836 Gene3D G3DSA:3.40.50.10050 638 715 6.8E-25 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 SUPERFAMILY SSF81665 266 311 3.4E-8 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 SUPERFAMILY SSF81665 412 506 3.4E-8 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 361 375 1.1E-22 T 29-03-2018 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 716 728 1.1E-22 T 29-03-2018 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 509 523 1.1E-22 T 29-03-2018 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 640 650 1.1E-22 T 29-03-2018 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 693 712 1.1E-22 T 29-03-2018 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 511 517 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 SUPERFAMILY SSF55008 94 169 1.31E-17 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 Gene3D G3DSA:1.20.1110.10 256 523 1.2E-37 T 29-03-2018 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 Gene3D G3DSA:1.20.1110.10 649 792 5.3E-26 T 29-03-2018 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 232 795 1.9E-146 T 29-03-2018 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 Pfam PF00122 E1-E2 ATPase 312 487 2.4E-50 T 29-03-2018 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 250 795 1.9E-153 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 Gene3D G3DSA:3.30.70.100 96 170 4.5E-15 T 29-03-2018 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 Pfam PF00702 haloacid dehalogenase-like hydrolase 508 707 1.8E-26 T 29-03-2018 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 274 797 1.4E-112 T 29-03-2018 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 SUPERFAMILY SSF56784 508 527 1.02E-45 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 SUPERFAMILY SSF56784 560 793 1.02E-45 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 618 772 1.2E-27 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 285 533 1.8E-41 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 Gene3D G3DSA:3.40.1110.10 524 648 1.2E-16 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 8 93 6.3E-23 T 29-03-2018 IPR021993 Putative metal-binding domain of cation transport ATPase CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 Pfam PF00403 Heavy-metal-associated domain 102 163 3.8E-8 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CHH28_RS17125 26a08663b082085e1ec5a36f16efe5c6 801 SUPERFAMILY SSF81653 314 411 7.06E-25 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CHH28_RS12390 91bad8bf62d68d48fb8377964cbb80e1 351 SUPERFAMILY SSF111337 1 337 1.09E-133 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CHH28_RS12390 91bad8bf62d68d48fb8377964cbb80e1 351 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 337 1.0E-143 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CHH28_RS12390 91bad8bf62d68d48fb8377964cbb80e1 351 Pfam PF02547 Queuosine biosynthesis protein 3 337 1.5E-133 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CHH28_RS12390 91bad8bf62d68d48fb8377964cbb80e1 351 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 338 47.12 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CHH28_RS12390 91bad8bf62d68d48fb8377964cbb80e1 351 Gene3D G3DSA:3.40.1780.10 172 338 1.1E-65 T 29-03-2018 CHH28_RS12390 91bad8bf62d68d48fb8377964cbb80e1 351 Gene3D G3DSA:3.40.1780.10 1 106 6.6E-33 T 29-03-2018 CHH28_RS01740 e41c2aee4e7c9826f6890bd4d2a61e59 209 Gene3D G3DSA:3.10.450.50 72 161 3.9E-20 T 29-03-2018 CHH28_RS01740 e41c2aee4e7c9826f6890bd4d2a61e59 209 Pfam PF05494 MlaC protein 36 199 1.5E-44 T 29-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CHH28_RS01740 e41c2aee4e7c9826f6890bd4d2a61e59 209 Gene3D G3DSA:1.10.10.640 162 209 0.1 T 29-03-2018 CHH28_RS01740 e41c2aee4e7c9826f6890bd4d2a61e59 209 PIRSF PIRSF004649 1 209 5.8E-46 T 29-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CHH28_RS12685 f32a8b1652fd30a2934b4b6780a40c7c 281 SUPERFAMILY SSF53448 5 275 3.15E-58 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS12685 f32a8b1652fd30a2934b4b6780a40c7c 281 Pfam PF00483 Nucleotidyl transferase 14 272 2.8E-27 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CHH28_RS12685 f32a8b1652fd30a2934b4b6780a40c7c 281 Gene3D G3DSA:3.90.550.10 3 279 2.9E-51 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS12685 f32a8b1652fd30a2934b4b6780a40c7c 281 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 6 269 1.6E-115 T 29-03-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 CHH28_RS18325 f52ef920a8f14c4f3e42e2481560d736 288 Gene3D G3DSA:3.40.50.1100 45 135 4.3E-18 T 29-03-2018 CHH28_RS18325 f52ef920a8f14c4f3e42e2481560d736 288 Gene3D G3DSA:3.40.50.1100 136 283 9.7E-6 T 29-03-2018 CHH28_RS18325 f52ef920a8f14c4f3e42e2481560d736 288 PIRSF PIRSF006278 3 288 1.1E-46 T 29-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase CHH28_RS18325 f52ef920a8f14c4f3e42e2481560d736 288 SUPERFAMILY SSF53686 20 286 2.03E-35 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CHH28_RS18325 f52ef920a8f14c4f3e42e2481560d736 288 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 250 2.5E-9 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CHH28_RS09700 6e8101eefb35cc63a0ee2d968a3ed1ae 86 PRINTS PR01591 DNA-binding protein FIS signature 30 45 2.1E-13 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CHH28_RS09700 6e8101eefb35cc63a0ee2d968a3ed1ae 86 PRINTS PR01591 DNA-binding protein FIS signature 45 57 2.1E-13 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CHH28_RS09700 6e8101eefb35cc63a0ee2d968a3ed1ae 86 PRINTS PR01591 DNA-binding protein FIS signature 14 30 2.1E-13 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CHH28_RS09700 6e8101eefb35cc63a0ee2d968a3ed1ae 86 Pfam PF02954 Bacterial regulatory protein, Fis family 43 83 8.8E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS09700 6e8101eefb35cc63a0ee2d968a3ed1ae 86 PIRSF PIRSF002097 1 86 1.0E-37 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CHH28_RS09700 6e8101eefb35cc63a0ee2d968a3ed1ae 86 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 49 66 5.1E-9 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS09700 6e8101eefb35cc63a0ee2d968a3ed1ae 86 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 66 86 5.1E-9 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS09700 6e8101eefb35cc63a0ee2d968a3ed1ae 86 SUPERFAMILY SSF46689 14 85 2.33E-21 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS09700 6e8101eefb35cc63a0ee2d968a3ed1ae 86 Gene3D G3DSA:1.10.10.60 3 85 7.6E-18 T 29-03-2018 CHH28_RS13700 ec0a3c92e51bc1ab5ea16495e85dfdd1 129 SMART SM00448 8 122 1.5E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13700 ec0a3c92e51bc1ab5ea16495e85dfdd1 129 Pfam PF00072 Response regulator receiver domain 10 122 4.8E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13700 ec0a3c92e51bc1ab5ea16495e85dfdd1 129 Gene3D G3DSA:3.40.50.2300 1 129 6.4E-35 T 29-03-2018 CHH28_RS13700 ec0a3c92e51bc1ab5ea16495e85dfdd1 129 SUPERFAMILY SSF52172 4 126 1.71E-34 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS11895 3555f5a45f54832e92940dd08e1cbc0a 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 16.679 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CHH28_RS11895 3555f5a45f54832e92940dd08e1cbc0a 64 Pfam PF01632 Ribosomal protein L35 2 61 7.6E-22 T 29-03-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS11895 3555f5a45f54832e92940dd08e1cbc0a 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 8.1E-21 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CHH28_RS11895 3555f5a45f54832e92940dd08e1cbc0a 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 8.1E-21 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CHH28_RS11895 3555f5a45f54832e92940dd08e1cbc0a 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 8.1E-21 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CHH28_RS11895 3555f5a45f54832e92940dd08e1cbc0a 64 SUPERFAMILY SSF143034 2 62 1.83E-20 T 29-03-2018 CHH28_RS11895 3555f5a45f54832e92940dd08e1cbc0a 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 3.0E-23 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CHH28_RS11895 3555f5a45f54832e92940dd08e1cbc0a 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 29-03-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 ProSitePatterns PS01047 Heavy-metal-associated domain. 81 110 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 ProSitePatterns PS01047 Heavy-metal-associated domain. 15 44 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 Gene3D G3DSA:1.20.1110.10 273 526 2.8E-47 T 29-03-2018 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 SUPERFAMILY SSF81665 261 314 2.75E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 SUPERFAMILY SSF81665 411 506 2.75E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 SUPERFAMILY SSF81665 760 800 2.75E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 225 821 1.2E-183 T 29-03-2018 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 SUPERFAMILY SSF55008 75 141 6.41E-19 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 243 820 1.8E-193 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 Gene3D G3DSA:3.40.50.1000 634 783 1.4E-46 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 SUPERFAMILY SSF56784 569 818 2.27E-63 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 SUPERFAMILY SSF56784 510 530 2.27E-63 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 Gene3D G3DSA:3.40.1110.10 527 633 1.3E-33 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 SUPERFAMILY SSF81653 312 410 6.15E-30 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 Gene3D G3DSA:3.30.70.100 5 74 2.7E-20 T 29-03-2018 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 Gene3D G3DSA:3.30.70.100 75 143 9.9E-22 T 29-03-2018 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 78 137 3.5E-9 T 29-03-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 12 72 9.5E-10 T 29-03-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 Pfam PF00702 haloacid dehalogenase-like hydrolase 510 724 6.0E-41 T 29-03-2018 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 SUPERFAMILY SSF55008 11 72 1.01E-17 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 282 793 1.9E-94 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 PRINTS PR00943 Copper-transporting ATPase signature 280 299 6.5E-12 T 29-03-2018 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 PRINTS PR00943 Copper-transporting ATPase signature 300 318 6.5E-12 T 29-03-2018 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 PRINTS PR00943 Copper-transporting ATPase signature 784 798 6.5E-12 T 29-03-2018 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 PRINTS PR00943 Copper-transporting ATPase signature 688 705 6.5E-12 T 29-03-2018 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 PRINTS PR00943 Copper-transporting ATPase signature 228 247 6.5E-12 T 29-03-2018 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 PRINTS PR00943 Copper-transporting ATPase signature 433 447 6.5E-12 T 29-03-2018 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 Pfam PF00122 E1-E2 ATPase 311 491 3.3E-57 T 29-03-2018 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 Pfam PF00403 Heavy-metal-associated domain 13 71 6.5E-13 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 Pfam PF00403 Heavy-metal-associated domain 79 135 3.6E-15 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 514 520 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 512 526 1.5E-28 T 29-03-2018 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 734 746 1.5E-28 T 29-03-2018 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 658 668 1.5E-28 T 29-03-2018 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 360 374 1.5E-28 T 29-03-2018 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 647 1.5E-28 T 29-03-2018 CHH28_RS06750 d69dedec18825063793d193835dbd9f4 837 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 711 730 1.5E-28 T 29-03-2018 CHH28_RS11800 3a1df4e00bcb6297e1e344d8b1a3b43a 349 Pfam PF12833 Helix-turn-helix domain 259 336 1.2E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS11800 3a1df4e00bcb6297e1e344d8b1a3b43a 349 SMART SM00342 252 334 1.3E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS11800 3a1df4e00bcb6297e1e344d8b1a3b43a 349 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 288 330 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CHH28_RS11800 3a1df4e00bcb6297e1e344d8b1a3b43a 349 SUPERFAMILY SSF46689 287 338 8.96E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS11800 3a1df4e00bcb6297e1e344d8b1a3b43a 349 Gene3D G3DSA:1.10.10.60 290 344 1.5E-15 T 29-03-2018 CHH28_RS11800 3a1df4e00bcb6297e1e344d8b1a3b43a 349 Gene3D G3DSA:1.10.10.60 52 289 0.17 T 29-03-2018 CHH28_RS11800 3a1df4e00bcb6297e1e344d8b1a3b43a 349 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 25 208 2.7E-35 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS11800 3a1df4e00bcb6297e1e344d8b1a3b43a 349 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 303 318 4.9E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS11800 3a1df4e00bcb6297e1e344d8b1a3b43a 349 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 318 334 4.9E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS09725 e0662a011bce4c08a3e1da10185bda6c 541 SMART SM00448 247 360 3.2E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS09725 e0662a011bce4c08a3e1da10185bda6c 541 Pfam PF00990 Diguanylate cyclase, GGDEF domain 376 526 4.6E-42 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS09725 e0662a011bce4c08a3e1da10185bda6c 541 SUPERFAMILY SSF52172 245 376 9.39E-34 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS09725 e0662a011bce4c08a3e1da10185bda6c 541 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 375 529 1.1E-42 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS09725 e0662a011bce4c08a3e1da10185bda6c 541 Gene3D G3DSA:3.40.50.2300 235 369 1.2E-30 T 29-03-2018 CHH28_RS09725 e0662a011bce4c08a3e1da10185bda6c 541 SUPERFAMILY SSF55073 379 529 3.3E-44 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS09725 e0662a011bce4c08a3e1da10185bda6c 541 Gene3D G3DSA:3.30.70.270 370 531 7.3E-52 T 29-03-2018 CHH28_RS09725 e0662a011bce4c08a3e1da10185bda6c 541 Gene3D G3DSA:3.40.50.2300 101 229 1.0E-4 T 29-03-2018 CHH28_RS09725 e0662a011bce4c08a3e1da10185bda6c 541 Pfam PF00072 Response regulator receiver domain 249 360 2.2E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS09725 e0662a011bce4c08a3e1da10185bda6c 541 SMART SM00267 363 530 2.0E-54 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS02200 7678ac3ca6341aaaaa14cae51460053e 1039 Pfam PF00652 Ricin-type beta-trefoil lectin domain 916 1011 8.0E-12 T 29-03-2018 IPR000772 Ricin B, lectin domain CHH28_RS02200 7678ac3ca6341aaaaa14cae51460053e 1039 Pfam PF10462 Peptidase M66 351 637 6.0E-38 T 29-03-2018 IPR019503 Peptidase M66 domain GO:0004222 CHH28_RS02200 7678ac3ca6341aaaaa14cae51460053e 1039 SUPERFAMILY SSF50370 907 1012 1.76E-15 T 29-03-2018 IPR000772 Ricin B, lectin domain CHH28_RS02200 7678ac3ca6341aaaaa14cae51460053e 1039 SMART SM00458 898 1014 1.0E-5 T 29-03-2018 IPR000772 Ricin B, lectin domain CHH28_RS02200 7678ac3ca6341aaaaa14cae51460053e 1039 Gene3D G3DSA:2.80.10.50 893 1013 1.0E-14 T 29-03-2018 CHH28_RS02495 8b4a55ba91741084728976dc36a74fc7 85 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 49 1.7E-21 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CHH28_RS02495 8b4a55ba91741084728976dc36a74fc7 85 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 85 22.924 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CHH28_RS02495 8b4a55ba91741084728976dc36a74fc7 85 Pfam PF02416 mttA/Hcf106 family 5 55 2.5E-13 T 29-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CHH28_RS08750 37dbd428a8f827ecd3d0bdfb4fbf1011 333 Gene3D G3DSA:3.30.2340.10 170 231 8.9E-16 T 29-03-2018 CHH28_RS08750 37dbd428a8f827ecd3d0bdfb4fbf1011 333 Gene3D G3DSA:3.30.2340.10 232 281 3.4E-5 T 29-03-2018 CHH28_RS08750 37dbd428a8f827ecd3d0bdfb4fbf1011 333 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 79 92 - T 29-03-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 CHH28_RS08750 37dbd428a8f827ecd3d0bdfb4fbf1011 333 SUPERFAMILY SSF55120 15 317 2.73E-87 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS08750 37dbd428a8f827ecd3d0bdfb4fbf1011 333 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 7 321 26.559 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS08750 37dbd428a8f827ecd3d0bdfb4fbf1011 333 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 12 217 2.2E-51 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS08750 37dbd428a8f827ecd3d0bdfb4fbf1011 333 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 15 187 5.5E-44 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS08750 37dbd428a8f827ecd3d0bdfb4fbf1011 333 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 234 316 4.3E-6 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS17650 9a3320caeb0c6ab922c49ede1aba8273 380 Gene3D G3DSA:3.90.1150.10 297 375 8.9E-21 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS17650 9a3320caeb0c6ab922c49ede1aba8273 380 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 235 244 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CHH28_RS17650 9a3320caeb0c6ab922c49ede1aba8273 380 Gene3D G3DSA:3.40.640.10 62 296 2.9E-44 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS17650 9a3320caeb0c6ab922c49ede1aba8273 380 Pfam PF00155 Aminotransferase class I and II 48 368 1.7E-50 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CHH28_RS17650 9a3320caeb0c6ab922c49ede1aba8273 380 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 17 374 61.232 T 29-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CHH28_RS17650 9a3320caeb0c6ab922c49ede1aba8273 380 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 23 373 1.5E-107 T 29-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CHH28_RS17650 9a3320caeb0c6ab922c49ede1aba8273 380 SUPERFAMILY SSF53383 22 366 8.87E-81 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS09440 25908df3a0521f637fbcd13bbc22913e 363 Gene3D G3DSA:3.30.70.20 76 210 1.1E-4 T 29-03-2018 CHH28_RS09440 25908df3a0521f637fbcd13bbc22913e 363 Pfam PF08331 Domain of unknown function (DUF1730) 73 151 1.5E-20 T 29-03-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 CHH28_RS09440 25908df3a0521f637fbcd13bbc22913e 363 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 18 327 47.599 T 29-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CHH28_RS09440 25908df3a0521f637fbcd13bbc22913e 363 Gene3D G3DSA:3.30.70.20 211 309 8.0E-11 T 29-03-2018 CHH28_RS09440 25908df3a0521f637fbcd13bbc22913e 363 SUPERFAMILY SSF54862 182 298 7.95E-18 T 29-03-2018 CHH28_RS09440 25908df3a0521f637fbcd13bbc22913e 363 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 205 216 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CHH28_RS09440 25908df3a0521f637fbcd13bbc22913e 363 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 27 360 2.4E-148 T 29-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CHH28_RS09440 25908df3a0521f637fbcd13bbc22913e 363 Pfam PF13484 4Fe-4S double cluster binding domain 204 268 1.8E-18 T 29-03-2018 CHH28_RS18675 1fb438bfc3194c22205b1958c023bc43 344 Pfam PF00072 Response regulator receiver domain 5 110 4.6E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS18675 1fb438bfc3194c22205b1958c023bc43 344 SUPERFAMILY SSF52738 157 341 3.01E-63 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS18675 1fb438bfc3194c22205b1958c023bc43 344 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 344 38.202 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS18675 1fb438bfc3194c22205b1958c023bc43 344 Gene3D G3DSA:3.40.50.180 149 343 3.3E-72 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS18675 1fb438bfc3194c22205b1958c023bc43 344 Gene3D G3DSA:3.40.50.2300 2 142 8.6E-28 T 29-03-2018 CHH28_RS18675 1fb438bfc3194c22205b1958c023bc43 344 PIRSF PIRSF000876 1 343 1.7E-126 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS18675 1fb438bfc3194c22205b1958c023bc43 344 SUPERFAMILY SSF52172 2 110 2.7E-26 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS18675 1fb438bfc3194c22205b1958c023bc43 344 Pfam PF01339 CheB methylesterase 161 339 8.2E-61 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS18675 1fb438bfc3194c22205b1958c023bc43 344 SMART SM00448 3 122 6.0E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS11145 cd95adbe55cd43bd1d7f00505a1a791b 230 Gene3D G3DSA:3.30.160.20 142 230 1.8E-17 T 29-03-2018 CHH28_RS11145 cd95adbe55cd43bd1d7f00505a1a791b 230 Pfam PF00035 Double-stranded RNA binding motif 155 222 1.7E-11 T 29-03-2018 IPR014720 Double-stranded RNA-binding domain CHH28_RS11145 cd95adbe55cd43bd1d7f00505a1a791b 230 Pfam PF14622 Ribonuclease-III-like 18 139 1.9E-34 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CHH28_RS11145 cd95adbe55cd43bd1d7f00505a1a791b 230 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 27.735 T 29-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CHH28_RS11145 cd95adbe55cd43bd1d7f00505a1a791b 230 SUPERFAMILY SSF54768 108 226 2.36E-26 T 29-03-2018 CHH28_RS11145 cd95adbe55cd43bd1d7f00505a1a791b 230 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CHH28_RS11145 cd95adbe55cd43bd1d7f00505a1a791b 230 SMART SM00358 155 223 7.1E-17 T 29-03-2018 IPR014720 Double-stranded RNA-binding domain CHH28_RS11145 cd95adbe55cd43bd1d7f00505a1a791b 230 SUPERFAMILY SSF69065 5 157 5.23E-47 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CHH28_RS11145 cd95adbe55cd43bd1d7f00505a1a791b 230 SMART SM00535 20 148 1.3E-53 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CHH28_RS11145 cd95adbe55cd43bd1d7f00505a1a791b 230 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 10 222 5.5E-69 T 29-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CHH28_RS11145 cd95adbe55cd43bd1d7f00505a1a791b 230 Gene3D G3DSA:1.10.1520.10 3 141 4.9E-43 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CHH28_RS16760 401586761cc9170f3e9db5092c5f0d78 458 SUPERFAMILY SSF161098 233 433 6.54E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS16760 401586761cc9170f3e9db5092c5f0d78 458 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 250 453 1.6E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS16760 401586761cc9170f3e9db5092c5f0d78 458 Gene3D G3DSA:1.10.3720.10 27 443 8.6E-36 T 29-03-2018 CHH28_RS06495 78af2e3ffacd6e562699c958f460396a 109 Gene3D G3DSA:3.40.30.10 36 106 6.1E-19 T 29-03-2018 CHH28_RS06495 78af2e3ffacd6e562699c958f460396a 109 SUPERFAMILY SSF52833 37 107 1.2E-18 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS06495 78af2e3ffacd6e562699c958f460396a 109 Pfam PF00462 Glutaredoxin 38 96 4.5E-15 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CHH28_RS02645 eacb5d44de01a3091a774ce88d80ea3e 769 ProSitePatterns PS01095 Chitinases family 18 active site. 210 218 - T 29-03-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CHH28_RS02645 eacb5d44de01a3091a774ce88d80ea3e 769 SMART SM00495 724 766 8.3E-9 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CHH28_RS02645 eacb5d44de01a3091a774ce88d80ea3e 769 SUPERFAMILY SSF51445 52 368 1.26E-78 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CHH28_RS02645 eacb5d44de01a3091a774ce88d80ea3e 769 SUPERFAMILY SSF51445 487 517 1.26E-78 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CHH28_RS02645 eacb5d44de01a3091a774ce88d80ea3e 769 Pfam PF00704 Glycosyl hydrolases family 18 58 515 8.5E-87 T 29-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 CHH28_RS02645 eacb5d44de01a3091a774ce88d80ea3e 769 Pfam PF14600 Cellulose-binding domain 713 766 3.2E-20 T 29-03-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CHH28_RS02645 eacb5d44de01a3091a774ce88d80ea3e 769 Pfam PF06483 Chitinase C 524 690 2.3E-58 T 29-03-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CHH28_RS02645 eacb5d44de01a3091a774ce88d80ea3e 769 SUPERFAMILY SSF51055 713 768 3.92E-14 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CHH28_RS02645 eacb5d44de01a3091a774ce88d80ea3e 769 Gene3D G3DSA:3.20.20.80 9 554 1.2E-88 T 29-03-2018 CHH28_RS02645 eacb5d44de01a3091a774ce88d80ea3e 769 Gene3D G3DSA:2.10.10.20 709 768 3.7E-11 T 29-03-2018 CHH28_RS02645 eacb5d44de01a3091a774ce88d80ea3e 769 SMART SM00636 57 515 6.0E-116 T 29-03-2018 IPR011583 Chitinase II GO:0008061 CHH28_RS02645 eacb5d44de01a3091a774ce88d80ea3e 769 SUPERFAMILY SSF54556 368 485 1.57E-16 T 29-03-2018 IPR029070 Chitinase insertion domain CHH28_RS05205 08dc32d23d6c0b5244237d2dd47e03d2 185 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 5 180 4.6E-51 T 29-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CHH28_RS05205 08dc32d23d6c0b5244237d2dd47e03d2 185 Gene3D G3DSA:3.40.50.150 2 185 4.5E-37 T 29-03-2018 CHH28_RS05205 08dc32d23d6c0b5244237d2dd47e03d2 185 Pfam PF03602 Conserved hypothetical protein 95 9 179 9.5E-55 T 29-03-2018 CHH28_RS05205 08dc32d23d6c0b5244237d2dd47e03d2 185 PIRSF PIRSF004553 8 182 1.5E-49 T 29-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CHH28_RS05205 08dc32d23d6c0b5244237d2dd47e03d2 185 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 121 127 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CHH28_RS05205 08dc32d23d6c0b5244237d2dd47e03d2 185 SUPERFAMILY SSF53335 9 179 7.6E-48 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS11655 f0c872fb4325e5f11cf64fbb2c709fc6 465 Gene3D G3DSA:3.90.1380.10 1 88 9.5E-30 T 29-03-2018 IPR029144 Threonine synthase, N-terminal CHH28_RS11655 f0c872fb4325e5f11cf64fbb2c709fc6 465 TIGRFAM TIGR00260 thrC: threonine synthase 75 423 6.0E-82 T 29-03-2018 IPR004450 Threonine synthase-like CHH28_RS11655 f0c872fb4325e5f11cf64fbb2c709fc6 465 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 92 401 4.9E-20 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CHH28_RS11655 f0c872fb4325e5f11cf64fbb2c709fc6 465 Pfam PF14821 Threonine synthase N terminus 2 80 8.0E-29 T 29-03-2018 IPR029144 Threonine synthase, N-terminal CHH28_RS11655 f0c872fb4325e5f11cf64fbb2c709fc6 465 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 102 116 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CHH28_RS11655 f0c872fb4325e5f11cf64fbb2c709fc6 465 Gene3D G3DSA:3.40.50.1100 106 204 2.3E-13 T 29-03-2018 CHH28_RS11655 f0c872fb4325e5f11cf64fbb2c709fc6 465 SUPERFAMILY SSF53686 1 462 4.11E-157 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CHH28_RS11655 f0c872fb4325e5f11cf64fbb2c709fc6 465 Gene3D G3DSA:3.40.50.1100 205 429 2.1E-79 T 29-03-2018 CHH28_RS05840 17b8b8cb2235cba0676ea45f65d68ee8 430 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 1.3E-30 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CHH28_RS05840 17b8b8cb2235cba0676ea45f65d68ee8 430 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 187 209 1.3E-30 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CHH28_RS05840 17b8b8cb2235cba0676ea45f65d68ee8 430 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 166 181 1.3E-30 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CHH28_RS05840 17b8b8cb2235cba0676ea45f65d68ee8 430 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 220 232 1.3E-30 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CHH28_RS05840 17b8b8cb2235cba0676ea45f65d68ee8 430 SUPERFAMILY SSF55174 325 429 3.59E-5 T 29-03-2018 CHH28_RS05840 17b8b8cb2235cba0676ea45f65d68ee8 430 SUPERFAMILY SSF52374 5 327 1.9E-100 T 29-03-2018 CHH28_RS05840 17b8b8cb2235cba0676ea45f65d68ee8 430 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 428 1.7E-115 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CHH28_RS05840 17b8b8cb2235cba0676ea45f65d68ee8 430 Pfam PF00579 tRNA synthetases class I (W and Y) 33 327 3.2E-80 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS05840 17b8b8cb2235cba0676ea45f65d68ee8 430 Gene3D G3DSA:1.10.240.10 227 328 7.1E-32 T 29-03-2018 CHH28_RS05840 17b8b8cb2235cba0676ea45f65d68ee8 430 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS05840 17b8b8cb2235cba0676ea45f65d68ee8 430 Gene3D G3DSA:3.40.50.620 1 226 5.2E-65 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS05840 17b8b8cb2235cba0676ea45f65d68ee8 430 Gene3D G3DSA:3.10.290.10 329 430 3.4E-10 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CHH28_RS05840 17b8b8cb2235cba0676ea45f65d68ee8 430 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 3 430 42.742 T 29-03-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 CHH28_RS03475 d8da3fbfda348b4f687e96190846cc04 512 SUPERFAMILY SSF53795 196 511 1.3E-127 T 29-03-2018 CHH28_RS03475 d8da3fbfda348b4f687e96190846cc04 512 Gene3D G3DSA:3.90.228.20 276 509 5.8E-82 T 29-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CHH28_RS03475 d8da3fbfda348b4f687e96190846cc04 512 Gene3D G3DSA:3.90.228.20 196 275 1.6E-28 T 29-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CHH28_RS03475 d8da3fbfda348b4f687e96190846cc04 512 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 2 510 2.1E-188 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CHH28_RS03475 d8da3fbfda348b4f687e96190846cc04 512 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 1 511 50.401 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CHH28_RS03475 d8da3fbfda348b4f687e96190846cc04 512 Pfam PF01293 Phosphoenolpyruvate carboxykinase 3 465 1.2E-195 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CHH28_RS03475 d8da3fbfda348b4f687e96190846cc04 512 PIRSF PIRSF006294 1 511 1.1E-210 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CHH28_RS03475 d8da3fbfda348b4f687e96190846cc04 512 SUPERFAMILY SSF68923 2 195 8.72E-73 T 29-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CHH28_RS03475 d8da3fbfda348b4f687e96190846cc04 512 Gene3D G3DSA:3.40.449.10 4 194 6.7E-66 T 29-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 SUPERFAMILY SSF47323 434 561 7.85E-38 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 Gene3D G3DSA:1.10.730.10 416 561 1.2E-49 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 561 26.165 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 Gene3D G3DSA:3.40.50.620 332 415 4.9E-14 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 SMART SM00836 440 561 5.6E-60 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 SUPERFAMILY SSF52374 114 451 1.27E-92 T 29-03-2018 CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 307 328 1.6E-23 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 135 1.6E-23 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 159 172 1.6E-23 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 135 151 1.6E-23 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 91 1.4E-24 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 SMART SM01016 3 91 2.8E-37 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 130 139 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 7 561 1.0E-138 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 SUPERFAMILY SSF55190 5 111 4.97E-25 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 Gene3D G3DSA:3.30.1360.70 1 116 1.2E-32 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 Gene3D G3DSA:3.40.50.620 117 331 3.1E-43 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 Pfam PF05746 DALR anticodon binding domain 440 561 3.1E-38 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CHH28_RS05925 a26481e448837aca36b1e878ca4cf242 561 Pfam PF00750 tRNA synthetases class I (R) 100 409 1.4E-27 T 29-03-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 CHH28_RS16595 527057bfc8787ab66b0a7c43447a1593 472 Gene3D G3DSA:3.40.50.720 50 214 0.0021 T 29-03-2018 CHH28_RS16595 527057bfc8787ab66b0a7c43447a1593 472 Gene3D G3DSA:3.40.50.720 215 471 1.7E-58 T 29-03-2018 CHH28_RS16595 527057bfc8787ab66b0a7c43447a1593 472 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 378 397 2.3E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS16595 527057bfc8787ab66b0a7c43447a1593 472 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 432 452 2.3E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS16595 527057bfc8787ab66b0a7c43447a1593 472 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 235 252 2.3E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS16595 527057bfc8787ab66b0a7c43447a1593 472 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 399 416 2.3E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS16595 527057bfc8787ab66b0a7c43447a1593 472 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 352 368 2.3E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS16595 527057bfc8787ab66b0a7c43447a1593 472 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 305 316 2.3E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS16595 527057bfc8787ab66b0a7c43447a1593 472 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 234 409 6.0E-4 T 29-03-2018 CHH28_RS16595 527057bfc8787ab66b0a7c43447a1593 472 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 240 465 5.8E-47 T 29-03-2018 CHH28_RS16595 527057bfc8787ab66b0a7c43447a1593 472 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 358 366 5.9E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS16595 527057bfc8787ab66b0a7c43447a1593 472 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 305 316 5.9E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS16595 527057bfc8787ab66b0a7c43447a1593 472 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 378 397 5.9E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS16595 527057bfc8787ab66b0a7c43447a1593 472 SUPERFAMILY SSF51735 230 466 5.14E-59 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS05880 9508f757582480d2ec6f6384a42dfe68 480 Gene3D G3DSA:3.40.50.300 235 477 2.1E-43 T 29-03-2018 CHH28_RS05880 9508f757582480d2ec6f6384a42dfe68 480 SMART SM00382 25 235 1.7E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS05880 9508f757582480d2ec6f6384a42dfe68 480 SMART SM00382 272 466 1.9E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS05880 9508f757582480d2ec6f6384a42dfe68 480 SUPERFAMILY SSF52540 238 452 5.04E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS05880 9508f757582480d2ec6f6384a42dfe68 480 ProSitePatterns PS00211 ABC transporters family signature. 388 402 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS05880 9508f757582480d2ec6f6384a42dfe68 480 Gene3D G3DSA:3.40.50.300 16 228 7.1E-32 T 29-03-2018 CHH28_RS05880 9508f757582480d2ec6f6384a42dfe68 480 SUPERFAMILY SSF52540 22 229 1.54E-33 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS05880 9508f757582480d2ec6f6384a42dfe68 480 Pfam PF00005 ABC transporter 21 154 9.3E-17 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS05880 9508f757582480d2ec6f6384a42dfe68 480 Pfam PF00005 ABC transporter 264 415 4.0E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS07645 0e19271df98ceecbcec91d3bc819f330 112 Pfam PF03831 PhnA domain 45 112 3.6E-26 T 29-03-2018 IPR013988 PhnA protein, C-terminal CHH28_RS07645 0e19271df98ceecbcec91d3bc819f330 112 SUPERFAMILY SSF82057 40 112 1.01E-23 T 29-03-2018 CHH28_RS07645 0e19271df98ceecbcec91d3bc819f330 112 Gene3D G3DSA:2.30.30.40 43 111 1.8E-26 T 29-03-2018 CHH28_RS07645 0e19271df98ceecbcec91d3bc819f330 112 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 112 8.1E-40 T 29-03-2018 IPR004624 PhnA protein CHH28_RS07645 0e19271df98ceecbcec91d3bc819f330 112 Gene3D G3DSA:2.20.25.10 1 39 7.7E-15 T 29-03-2018 CHH28_RS07645 0e19271df98ceecbcec91d3bc819f330 112 Pfam PF08274 PhnA Zinc-Ribbon 3 30 6.1E-12 T 29-03-2018 IPR013987 PhnA protein, N-terminal CHH28_RS07645 0e19271df98ceecbcec91d3bc819f330 112 SUPERFAMILY SSF57783 1 37 3.57E-13 T 29-03-2018 CHH28_RS05195 27fd9fa82c5d1323fffc8a850153bd56 727 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 9.1E-72 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CHH28_RS05195 27fd9fa82c5d1323fffc8a850153bd56 727 Gene3D G3DSA:3.40.50.300 151 281 4.1E-32 T 29-03-2018 CHH28_RS05195 27fd9fa82c5d1323fffc8a850153bd56 727 Gene3D G3DSA:3.40.50.300 4 149 7.5E-27 T 29-03-2018 CHH28_RS05195 27fd9fa82c5d1323fffc8a850153bd56 727 Gene3D G3DSA:3.40.50.300 388 668 2.2E-51 T 29-03-2018 CHH28_RS05195 27fd9fa82c5d1323fffc8a850153bd56 727 SUPERFAMILY SSF52540 7 645 4.92E-173 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS05195 27fd9fa82c5d1323fffc8a850153bd56 727 Pfam PF13361 UvrD-like helicase C-terminal domain 277 619 4.7E-71 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CHH28_RS05195 27fd9fa82c5d1323fffc8a850153bd56 727 Gene3D G3DSA:3.40.50.300 282 384 2.3E-27 T 29-03-2018 CHH28_RS05645 ee1fe25d4646e5af04974f6eebec0cb8 382 Gene3D G3DSA:3.40.50.1970 9 183 8.4E-50 T 29-03-2018 CHH28_RS05645 ee1fe25d4646e5af04974f6eebec0cb8 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CHH28_RS05645 ee1fe25d4646e5af04974f6eebec0cb8 382 SUPERFAMILY SSF56796 4 382 8.77E-132 T 29-03-2018 CHH28_RS05645 ee1fe25d4646e5af04974f6eebec0cb8 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 13 374 5.0E-125 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CHH28_RS05645 ee1fe25d4646e5af04974f6eebec0cb8 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 260 280 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CHH28_RS05645 ee1fe25d4646e5af04974f6eebec0cb8 382 Gene3D G3DSA:1.20.1090.10 184 382 4.1E-67 T 29-03-2018 CHH28_RS10055 ed369463e0e915de3b2936784dd8cec8 205 Pfam PF13410 Glutathione S-transferase, C-terminal domain 140 190 3.8E-7 T 29-03-2018 CHH28_RS10055 ed369463e0e915de3b2936784dd8cec8 205 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 3 204 1.3E-78 T 29-03-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 CHH28_RS10055 ed369463e0e915de3b2936784dd8cec8 205 SUPERFAMILY SSF52833 1 86 5.28E-24 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS10055 ed369463e0e915de3b2936784dd8cec8 205 Gene3D G3DSA:1.20.1050.10 99 205 1.0E-25 T 29-03-2018 CHH28_RS10055 ed369463e0e915de3b2936784dd8cec8 205 SUPERFAMILY SSF47616 83 204 1.95E-30 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CHH28_RS10055 ed369463e0e915de3b2936784dd8cec8 205 Gene3D G3DSA:3.40.30.10 1 98 3.3E-30 T 29-03-2018 CHH28_RS10055 ed369463e0e915de3b2936784dd8cec8 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 75 2.9E-16 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CHH28_RS04315 913b3783913bc297573f93ea46290374 684 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 161 1.0E-12 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS04315 913b3783913bc297573f93ea46290374 684 Gene3D G3DSA:2.40.170.20 172 684 1.6E-55 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS04315 913b3783913bc297573f93ea46290374 684 Gene3D G3DSA:2.170.130.10 27 171 2.9E-21 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS04315 913b3783913bc297573f93ea46290374 684 SUPERFAMILY SSF56935 31 684 1.43E-95 T 29-03-2018 CHH28_RS03120 9abfda8322cb3ccfdf8bb3f28dde011b 208 Gene3D G3DSA:1.20.120.20 25 207 3.4E-6 T 29-03-2018 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 Gene3D G3DSA:3.30.420.40 196 365 7.3E-45 T 29-03-2018 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 SUPERFAMILY SSF53067 186 381 6.55E-67 T 29-03-2018 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 Gene3D G3DSA:3.30.420.40 1 195 7.2E-80 T 29-03-2018 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 36.894 T 29-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 Gene3D G3DSA:2.60.34.10 389 530 7.3E-64 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 7.7E-289 T 29-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 SUPERFAMILY SSF100934 506 605 1.12E-18 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 SUPERFAMILY SSF100920 383 539 9.68E-61 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 Gene3D G3DSA:1.20.1270.10 531 618 6.3E-21 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 Pfam PF00012 Hsp70 protein 4 602 4.9E-266 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.9E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 PRINTS PR00301 70kDa heat shock protein signature 137 157 1.9E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 PRINTS PR00301 70kDa heat shock protein signature 197 207 1.9E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 PRINTS PR00301 70kDa heat shock protein signature 387 406 1.9E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 PRINTS PR00301 70kDa heat shock protein signature 364 384 1.9E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.9E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 PRINTS PR00301 70kDa heat shock protein signature 468 484 1.9E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.9E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 PRINTS PR00301 70kDa heat shock protein signature 333 349 1.9E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 SUPERFAMILY SSF53067 1 182 2.3E-66 T 29-03-2018 CHH28_RS00550 44c029149c435c61870020a64b7edd9f 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CHH28_RS10175 f196e9a79e77d00e58b9dec64214b399 179 Gene3D G3DSA:2.30.30.240 100 174 8.3E-20 T 29-03-2018 CHH28_RS10175 f196e9a79e77d00e58b9dec64214b399 179 Pfam PF05239 PRC-barrel domain 101 174 8.1E-8 T 29-03-2018 IPR027275 PRC-barrel domain CHH28_RS10175 f196e9a79e77d00e58b9dec64214b399 179 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 11 179 22.789 T 29-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CHH28_RS10175 f196e9a79e77d00e58b9dec64214b399 179 SUPERFAMILY SSF50447 11 98 3.04E-23 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CHH28_RS10175 f196e9a79e77d00e58b9dec64214b399 179 SUPERFAMILY SSF50346 104 179 5.89E-18 T 29-03-2018 IPR011033 PRC-barrel-like CHH28_RS10175 f196e9a79e77d00e58b9dec64214b399 179 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 12 178 7.1E-50 T 29-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CHH28_RS10175 f196e9a79e77d00e58b9dec64214b399 179 Gene3D G3DSA:2.40.30.60 10 98 9.2E-25 T 29-03-2018 IPR002676 RimM protein GO:0006364 CHH28_RS10175 f196e9a79e77d00e58b9dec64214b399 179 Pfam PF01782 RimM N-terminal domain 14 94 5.3E-26 T 29-03-2018 IPR002676 RimM protein GO:0006364 CHH28_RS15735 b9dba6c5bbd9b0e9e05b3af2c0692171 253 Pfam PF01569 PAP2 superfamily 74 188 6.6E-20 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CHH28_RS15735 b9dba6c5bbd9b0e9e05b3af2c0692171 253 Gene3D G3DSA:1.20.144.10 18 196 4.3E-23 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CHH28_RS15735 b9dba6c5bbd9b0e9e05b3af2c0692171 253 SUPERFAMILY SSF48317 14 190 1.7E-29 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CHH28_RS15735 b9dba6c5bbd9b0e9e05b3af2c0692171 253 SMART SM00014 71 181 5.0E-6 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CHH28_RS15035 0b2e5a895caa4e055cf340ad38b6a7cd 355 Gene3D G3DSA:3.20.20.70 9 353 3.6E-120 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS15035 0b2e5a895caa4e055cf340ad38b6a7cd 355 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 7 349 2.5E-148 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CHH28_RS15035 0b2e5a895caa4e055cf340ad38b6a7cd 355 Pfam PF00793 DAHP synthetase I family 41 339 4.5E-89 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CHH28_RS15035 0b2e5a895caa4e055cf340ad38b6a7cd 355 SUPERFAMILY SSF51569 8 349 1.03E-126 T 29-03-2018 CHH28_RS15035 0b2e5a895caa4e055cf340ad38b6a7cd 355 PIRSF PIRSF001361 1 355 1.4E-153 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CHH28_RS13930 ec36aebfae66623e561bb93691ebd144 559 Gene3D G3DSA:3.40.50.980 21 217 6.3E-40 T 29-03-2018 CHH28_RS13930 ec36aebfae66623e561bb93691ebd144 559 Gene3D G3DSA:2.30.38.10 373 454 3.7E-30 T 29-03-2018 CHH28_RS13930 ec36aebfae66623e561bb93691ebd144 559 SUPERFAMILY SSF56801 19 554 3.14E-153 T 29-03-2018 CHH28_RS13930 ec36aebfae66623e561bb93691ebd144 559 Pfam PF00501 AMP-binding enzyme 34 461 6.9E-110 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CHH28_RS13930 ec36aebfae66623e561bb93691ebd144 559 Gene3D G3DSA:3.40.50.980 218 372 6.8E-42 T 29-03-2018 CHH28_RS13930 ec36aebfae66623e561bb93691ebd144 559 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 4.3E-20 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CHH28_RS13930 ec36aebfae66623e561bb93691ebd144 559 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 29-03-2018 IPR020845 AMP-binding, conserved site CHH28_RS13930 ec36aebfae66623e561bb93691ebd144 559 Gene3D G3DSA:3.30.300.30 455 559 2.2E-29 T 29-03-2018 CHH28_RS13805 9de0a9520ec40ea57ca17b6c66f88b5a 205 PIRSF PIRSF020736 1 204 8.0E-89 T 29-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 CHH28_RS13805 9de0a9520ec40ea57ca17b6c66f88b5a 205 Gene3D G3DSA:1.20.1260.10 3 205 9.1E-71 T 29-03-2018 IPR012347 Ferritin-related CHH28_RS13805 9de0a9520ec40ea57ca17b6c66f88b5a 205 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 58 199 1.5E-63 T 29-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 CHH28_RS13805 9de0a9520ec40ea57ca17b6c66f88b5a 205 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 5 55 2.4E-14 T 29-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 CHH28_RS13805 9de0a9520ec40ea57ca17b6c66f88b5a 205 SUPERFAMILY SSF47240 7 202 8.11E-77 T 29-03-2018 IPR009078 Ferritin-like superfamily CHH28_RS19590 0f604fa1449a4f9ae56a1d0883d78143 719 Pfam PF05226 CHASE2 domain 4 360 5.7E-59 T 29-03-2018 IPR007890 CHASE2 CHH28_RS19590 0f604fa1449a4f9ae56a1d0883d78143 719 Gene3D G3DSA:3.30.70.1230 456 660 4.7E-46 T 29-03-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 CHH28_RS19590 0f604fa1449a4f9ae56a1d0883d78143 719 SUPERFAMILY SSF55073 456 642 2.51E-58 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS19590 0f604fa1449a4f9ae56a1d0883d78143 719 SMART SM01080 21 362 1.9E-74 T 29-03-2018 IPR007890 CHASE2 CHH28_RS19590 0f604fa1449a4f9ae56a1d0883d78143 719 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 460 636 1.2E-32 T 29-03-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 CHH28_RS19590 0f604fa1449a4f9ae56a1d0883d78143 719 SMART SM00044 426 633 2.2E-11 T 29-03-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 CHH28_RS12645 bc12adf6c3c1fa63019b88a968c5a186 255 SUPERFAMILY SSF56281 6 224 4.06E-31 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS12645 bc12adf6c3c1fa63019b88a968c5a186 255 Gene3D G3DSA:3.60.15.10 2 236 7.2E-28 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS12645 bc12adf6c3c1fa63019b88a968c5a186 255 Pfam PF12706 Beta-lactamase superfamily domain 25 200 7.1E-15 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS12645 bc12adf6c3c1fa63019b88a968c5a186 255 SMART SM00849 12 187 5.5E-6 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS09515 42100d6b5d08926ebb4c036e1bd68054 603 SUPERFAMILY SSF74863 23 133 9.94E-27 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CHH28_RS09515 42100d6b5d08926ebb4c036e1bd68054 603 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 600 32.45 T 29-03-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 CHH28_RS09515 42100d6b5d08926ebb4c036e1bd68054 603 Pfam PF00085 Thioredoxin 496 598 2.2E-13 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 CHH28_RS09515 42100d6b5d08926ebb4c036e1bd68054 603 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 196 402 9.9E-15 T 29-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CHH28_RS09515 42100d6b5d08926ebb4c036e1bd68054 603 SUPERFAMILY SSF52833 485 599 5.77E-22 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS09515 42100d6b5d08926ebb4c036e1bd68054 603 Pfam PF11412 Disulphide bond corrector protein DsbC 24 130 1.6E-20 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CHH28_RS09515 42100d6b5d08926ebb4c036e1bd68054 603 Gene3D G3DSA:2.60.40.1250 19 142 2.4E-26 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CHH28_RS09515 42100d6b5d08926ebb4c036e1bd68054 603 Gene3D G3DSA:3.40.30.10 471 599 5.6E-18 T 29-03-2018 CHH28_RS07000 5a8a4fd9224ef0a784cc7687a9e2c5a8 285 SUPERFAMILY SSF51069 144 277 2.88E-5 T 29-03-2018 IPR001148 Alpha carbonic anhydrase CHH28_RS10030 814f71d57553da0338c932eb8ac39bf1 93 SUPERFAMILY SSF55248 9 91 7.32E-30 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CHH28_RS10030 814f71d57553da0338c932eb8ac39bf1 93 Gene3D G3DSA:3.30.1360.20 9 93 6.9E-32 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CHH28_RS10030 814f71d57553da0338c932eb8ac39bf1 93 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 5 90 2.0E-29 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CHH28_RS10030 814f71d57553da0338c932eb8ac39bf1 93 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 1 91 22.03 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CHH28_RS00045 9199aa8c034a28abd76e15d35b62d7a9 358 Pfam PF00512 His Kinase A (phospho-acceptor) domain 137 191 1.2E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS00045 9199aa8c034a28abd76e15d35b62d7a9 358 SUPERFAMILY SSF47384 125 193 1.8E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS00045 9199aa8c034a28abd76e15d35b62d7a9 358 SUPERFAMILY SSF55785 9 103 1.12E-11 T 29-03-2018 IPR000014 PAS domain CHH28_RS00045 9199aa8c034a28abd76e15d35b62d7a9 358 SMART SM00387 238 357 5.0E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS00045 9199aa8c034a28abd76e15d35b62d7a9 358 Gene3D G3DSA:3.30.565.10 195 357 1.9E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS00045 9199aa8c034a28abd76e15d35b62d7a9 358 Gene3D G3DSA:1.10.287.130 124 192 7.5E-16 T 29-03-2018 CHH28_RS00045 9199aa8c034a28abd76e15d35b62d7a9 358 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 239 356 2.1E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS00045 9199aa8c034a28abd76e15d35b62d7a9 358 SMART SM00388 134 199 5.6E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS00045 9199aa8c034a28abd76e15d35b62d7a9 358 Gene3D G3DSA:3.30.450.20 7 114 3.3E-15 T 29-03-2018 CHH28_RS00045 9199aa8c034a28abd76e15d35b62d7a9 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 289 303 2.0E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS00045 9199aa8c034a28abd76e15d35b62d7a9 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 354 2.0E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS00045 9199aa8c034a28abd76e15d35b62d7a9 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 318 336 2.0E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS00045 9199aa8c034a28abd76e15d35b62d7a9 358 SMART SM00091 6 74 8.3E-4 T 29-03-2018 IPR000014 PAS domain CHH28_RS00045 9199aa8c034a28abd76e15d35b62d7a9 358 SUPERFAMILY SSF55874 200 355 1.06E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS00045 9199aa8c034a28abd76e15d35b62d7a9 358 Pfam PF00989 PAS fold 9 105 1.6E-9 T 29-03-2018 IPR013767 PAS fold GO:0006355 CHH28_RS19750 9199aa8c034a28abd76e15d35b62d7a9 358 Pfam PF00512 His Kinase A (phospho-acceptor) domain 137 191 1.2E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS19750 9199aa8c034a28abd76e15d35b62d7a9 358 SUPERFAMILY SSF47384 125 193 1.8E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS19750 9199aa8c034a28abd76e15d35b62d7a9 358 SUPERFAMILY SSF55785 9 103 1.12E-11 T 29-03-2018 IPR000014 PAS domain CHH28_RS19750 9199aa8c034a28abd76e15d35b62d7a9 358 SMART SM00387 238 357 5.0E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS19750 9199aa8c034a28abd76e15d35b62d7a9 358 Gene3D G3DSA:3.30.565.10 195 357 1.9E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS19750 9199aa8c034a28abd76e15d35b62d7a9 358 Gene3D G3DSA:1.10.287.130 124 192 7.5E-16 T 29-03-2018 CHH28_RS19750 9199aa8c034a28abd76e15d35b62d7a9 358 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 239 356 2.1E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS19750 9199aa8c034a28abd76e15d35b62d7a9 358 SMART SM00388 134 199 5.6E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS19750 9199aa8c034a28abd76e15d35b62d7a9 358 Gene3D G3DSA:3.30.450.20 7 114 3.3E-15 T 29-03-2018 CHH28_RS19750 9199aa8c034a28abd76e15d35b62d7a9 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 289 303 2.0E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS19750 9199aa8c034a28abd76e15d35b62d7a9 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 354 2.0E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS19750 9199aa8c034a28abd76e15d35b62d7a9 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 318 336 2.0E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS19750 9199aa8c034a28abd76e15d35b62d7a9 358 SMART SM00091 6 74 8.3E-4 T 29-03-2018 IPR000014 PAS domain CHH28_RS19750 9199aa8c034a28abd76e15d35b62d7a9 358 SUPERFAMILY SSF55874 200 355 1.06E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS19750 9199aa8c034a28abd76e15d35b62d7a9 358 Pfam PF00989 PAS fold 9 105 1.6E-9 T 29-03-2018 IPR013767 PAS fold GO:0006355 CHH28_RS11365 509bc3e455890bcec3dfca4bda4e2f93 233 SUPERFAMILY SSF48317 18 221 2.62E-19 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CHH28_RS11365 509bc3e455890bcec3dfca4bda4e2f93 233 Pfam PF01569 PAP2 superfamily 101 221 1.7E-17 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CHH28_RS11365 509bc3e455890bcec3dfca4bda4e2f93 233 SMART SM00014 101 215 0.0087 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CHH28_RS11365 509bc3e455890bcec3dfca4bda4e2f93 233 Gene3D G3DSA:1.20.144.10 2 220 9.3E-15 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CHH28_RS04040 70dd96c25c6dd471c90e395d3e6c836d 216 SUPERFAMILY SSF52172 3 135 2.13E-23 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS04040 70dd96c25c6dd471c90e395d3e6c836d 216 Pfam PF00072 Response regulator receiver domain 5 123 8.8E-18 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS04040 70dd96c25c6dd471c90e395d3e6c836d 216 Gene3D G3DSA:3.40.50.2300 2 131 6.0E-24 T 29-03-2018 CHH28_RS04040 70dd96c25c6dd471c90e395d3e6c836d 216 SUPERFAMILY SSF46894 151 214 2.72E-15 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CHH28_RS04040 70dd96c25c6dd471c90e395d3e6c836d 216 SMART SM00448 3 122 8.3E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS04040 70dd96c25c6dd471c90e395d3e6c836d 216 Gene3D G3DSA:1.10.10.10 132 216 1.6E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04040 70dd96c25c6dd471c90e395d3e6c836d 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 206 2.0E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS04040 70dd96c25c6dd471c90e395d3e6c836d 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 5.7E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS04040 70dd96c25c6dd471c90e395d3e6c836d 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 5.7E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS04040 70dd96c25c6dd471c90e395d3e6c836d 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 5.7E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS04040 70dd96c25c6dd471c90e395d3e6c836d 216 SMART SM00421 151 208 5.7E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS03665 1cec8711b666dcab9f1262367d2edc37 345 Pfam PF00175 Oxidoreductase NAD-binding domain 218 318 1.3E-10 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CHH28_RS03665 1cec8711b666dcab9f1262367d2edc37 345 Gene3D G3DSA:3.10.20.30 1 85 1.5E-12 T 29-03-2018 IPR012675 Beta-grasp domain CHH28_RS03665 1cec8711b666dcab9f1262367d2edc37 345 SUPERFAMILY SSF63380 99 200 8.6E-12 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CHH28_RS03665 1cec8711b666dcab9f1262367d2edc37 345 SUPERFAMILY SSF54292 3 85 4.34E-15 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CHH28_RS03665 1cec8711b666dcab9f1262367d2edc37 345 SUPERFAMILY SSF52343 211 340 3.01E-28 T 29-03-2018 CHH28_RS03665 1cec8711b666dcab9f1262367d2edc37 345 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 78 3.7E-7 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CHH28_RS03665 1cec8711b666dcab9f1262367d2edc37 345 Gene3D G3DSA:3.40.50.80 209 342 3.3E-18 T 29-03-2018 CHH28_RS03665 1cec8711b666dcab9f1262367d2edc37 345 Gene3D G3DSA:2.40.30.10 97 203 6.8E-10 T 29-03-2018 CHH28_RS17785 6c365f9ea69a0ae3be3c32d5a8f9a6d7 439 SUPERFAMILY SSF103473 59 435 6.54E-45 T 29-03-2018 IPR020846 Major facilitator superfamily domain CHH28_RS17785 6c365f9ea69a0ae3be3c32d5a8f9a6d7 439 Pfam PF12832 MFS_1 like family 63 415 3.9E-73 T 29-03-2018 IPR024989 Major facilitator superfamily associated domain CHH28_RS17785 6c365f9ea69a0ae3be3c32d5a8f9a6d7 439 Gene3D G3DSA:1.20.1250.20 50 241 2.1E-15 T 29-03-2018 CHH28_RS17785 6c365f9ea69a0ae3be3c32d5a8f9a6d7 439 Gene3D G3DSA:1.20.1250.20 242 438 1.0E-16 T 29-03-2018 CHH28_RS05365 65c8ac073e68823cb4526a174f7e4f63 757 SUPERFAMILY SSF55073 339 491 5.02E-42 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS05365 65c8ac073e68823cb4526a174f7e4f63 757 Pfam PF00563 EAL domain 505 739 3.9E-69 T 29-03-2018 IPR001633 EAL domain CHH28_RS05365 65c8ac073e68823cb4526a174f7e4f63 757 Gene3D G3DSA:3.30.70.270 327 491 1.5E-52 T 29-03-2018 CHH28_RS05365 65c8ac073e68823cb4526a174f7e4f63 757 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 333 486 6.5E-35 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS05365 65c8ac073e68823cb4526a174f7e4f63 757 Gene3D G3DSA:3.20.20.450 492 748 1.0E-91 T 29-03-2018 IPR001633 EAL domain CHH28_RS05365 65c8ac073e68823cb4526a174f7e4f63 757 SMART SM00052 499 744 4.9E-109 T 29-03-2018 IPR001633 EAL domain CHH28_RS05365 65c8ac073e68823cb4526a174f7e4f63 757 Gene3D G3DSA:3.30.450.20 27 193 1.3E-6 T 29-03-2018 CHH28_RS05365 65c8ac073e68823cb4526a174f7e4f63 757 SMART SM00267 323 489 1.2E-58 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS05365 65c8ac073e68823cb4526a174f7e4f63 757 SUPERFAMILY SSF141868 504 751 1.96E-83 T 29-03-2018 IPR001633 EAL domain CHH28_RS05365 65c8ac073e68823cb4526a174f7e4f63 757 Pfam PF00990 Diguanylate cyclase, GGDEF domain 335 483 2.6E-42 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS10520 ec86ffa83bc72c37ced30e309546b29a 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 234 9.1E-43 T 29-03-2018 CHH28_RS10520 ec86ffa83bc72c37ced30e309546b29a 254 Gene3D G3DSA:3.40.50.720 7 250 9.6E-54 T 29-03-2018 CHH28_RS10520 ec86ffa83bc72c37ced30e309546b29a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 9.7E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS10520 ec86ffa83bc72c37ced30e309546b29a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 9.7E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS10520 ec86ffa83bc72c37ced30e309546b29a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 9.7E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS10520 ec86ffa83bc72c37ced30e309546b29a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 9.7E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS10520 ec86ffa83bc72c37ced30e309546b29a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 9.7E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS10520 ec86ffa83bc72c37ced30e309546b29a 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 1.0E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS10520 ec86ffa83bc72c37ced30e309546b29a 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.0E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS10520 ec86ffa83bc72c37ced30e309546b29a 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 1.0E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS10520 ec86ffa83bc72c37ced30e309546b29a 254 SUPERFAMILY SSF51735 8 246 4.13E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS09890 97011e66ecad1a5bd2ae203411c25ac4 755 Pfam PF13361 UvrD-like helicase C-terminal domain 332 619 1.1E-23 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CHH28_RS09890 97011e66ecad1a5bd2ae203411c25ac4 755 Gene3D G3DSA:3.40.50.300 283 651 1.8E-35 T 29-03-2018 CHH28_RS09890 97011e66ecad1a5bd2ae203411c25ac4 755 SUPERFAMILY SSF52540 7 642 4.49E-90 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09890 97011e66ecad1a5bd2ae203411c25ac4 755 Gene3D G3DSA:3.40.50.300 1 282 6.3E-40 T 29-03-2018 CHH28_RS09890 97011e66ecad1a5bd2ae203411c25ac4 755 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 274 1.2E-35 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CHH28_RS00350 cca56c3e790b37ceacd0dc0eda5d1cd4 151 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 126 8.0E-43 T 29-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CHH28_RS00350 cca56c3e790b37ceacd0dc0eda5d1cd4 151 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 137 1.1E-47 T 29-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CHH28_RS00350 cca56c3e790b37ceacd0dc0eda5d1cd4 151 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 3.1E-17 T 29-03-2018 IPR020603 MraZ domain CHH28_RS00350 cca56c3e790b37ceacd0dc0eda5d1cd4 151 Pfam PF02381 MraZ protein, putative antitoxin-like 77 131 2.9E-18 T 29-03-2018 IPR020603 MraZ domain CHH28_RS00350 cca56c3e790b37ceacd0dc0eda5d1cd4 151 SUPERFAMILY SSF89447 1 138 2.09E-46 T 29-03-2018 CHH28_RS00350 cca56c3e790b37ceacd0dc0eda5d1cd4 151 Gene3D G3DSA:2.10.260.10 82 136 2.0E-7 T 29-03-2018 CHH28_RS00350 cca56c3e790b37ceacd0dc0eda5d1cd4 151 Gene3D G3DSA:2.10.260.10 4 46 0.021 T 29-03-2018 CHH28_RS00350 cca56c3e790b37ceacd0dc0eda5d1cd4 151 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 151 53.219 T 29-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CHH28_RS19530 20e58a0cadb2ba6574e066d3938473a4 328 Pfam PF00990 Diguanylate cyclase, GGDEF domain 171 314 8.9E-16 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS19530 20e58a0cadb2ba6574e066d3938473a4 328 Gene3D G3DSA:3.30.70.270 160 327 2.7E-22 T 29-03-2018 CHH28_RS19530 20e58a0cadb2ba6574e066d3938473a4 328 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 166 284 4.6E-14 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS19530 20e58a0cadb2ba6574e066d3938473a4 328 SMART SM00267 159 326 6.3E-13 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS19530 20e58a0cadb2ba6574e066d3938473a4 328 SUPERFAMILY SSF55073 176 318 1.1E-18 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS07175 4dc7483b11eb83a7369f6eaeb9dafe9f 624 Pfam PF07969 Amidohydrolase family 113 611 2.6E-53 T 29-03-2018 IPR013108 Amidohydrolase 3 CHH28_RS07175 4dc7483b11eb83a7369f6eaeb9dafe9f 624 Gene3D G3DSA:3.20.20.140 131 554 7.6E-36 T 29-03-2018 CHH28_RS07175 4dc7483b11eb83a7369f6eaeb9dafe9f 624 SUPERFAMILY SSF51556 120 189 1.78E-20 T 29-03-2018 IPR032466 Metal-dependent hydrolase CHH28_RS07175 4dc7483b11eb83a7369f6eaeb9dafe9f 624 SUPERFAMILY SSF51556 276 575 1.78E-20 T 29-03-2018 IPR032466 Metal-dependent hydrolase CHH28_RS07175 4dc7483b11eb83a7369f6eaeb9dafe9f 624 Gene3D G3DSA:2.30.40.10 59 130 6.1E-10 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS07175 4dc7483b11eb83a7369f6eaeb9dafe9f 624 SUPERFAMILY SSF51338 61 121 2.33E-7 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS07175 4dc7483b11eb83a7369f6eaeb9dafe9f 624 SUPERFAMILY SSF51338 574 597 2.33E-7 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS07175 4dc7483b11eb83a7369f6eaeb9dafe9f 624 Gene3D G3DSA:2.30.40.10 555 619 0.0015 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS04600 8d41bd21a7428273f450e05efc974740 240 Gene3D G3DSA:1.10.10.200 3 76 8.5E-21 T 29-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like CHH28_RS04600 8d41bd21a7428273f450e05efc974740 240 SUPERFAMILY SSF75625 1 238 1.05E-70 T 29-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS04600 8d41bd21a7428273f450e05efc974740 240 Gene3D G3DSA:3.30.70.980 80 172 1.3E-23 T 29-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS04600 8d41bd21a7428273f450e05efc974740 240 Pfam PF01709 Transcriptional regulator 4 235 4.1E-69 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS04600 8d41bd21a7428273f450e05efc974740 240 Gene3D G3DSA:3.30.70.980 180 240 1.1E-4 T 29-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS04600 8d41bd21a7428273f450e05efc974740 240 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 26.257 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS11375 b814edca6a7967c3652c4dc782bec36a 295 SUPERFAMILY SSF46785 3 83 4.58E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS11375 b814edca6a7967c3652c4dc782bec36a 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 61 7.5E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS11375 b814edca6a7967c3652c4dc782bec36a 295 Gene3D G3DSA:3.40.190.10 175 261 8.2E-24 T 29-03-2018 CHH28_RS11375 b814edca6a7967c3652c4dc782bec36a 295 Gene3D G3DSA:3.40.190.10 87 174 1.6E-13 T 29-03-2018 CHH28_RS11375 b814edca6a7967c3652c4dc782bec36a 295 SUPERFAMILY SSF53850 88 295 1.93E-42 T 29-03-2018 CHH28_RS11375 b814edca6a7967c3652c4dc782bec36a 295 Pfam PF03466 LysR substrate binding domain 87 294 4.3E-41 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS11375 b814edca6a7967c3652c4dc782bec36a 295 Gene3D G3DSA:1.10.10.10 2 82 2.9E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS18950 e6862f099bbcf355464b82497cc58506 1229 Pfam PF00460 Flagella basal body rod protein 3 33 1.2E-7 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CHH28_RS18950 e6862f099bbcf355464b82497cc58506 1229 SUPERFAMILY SSF117143 895 1043 7.45E-44 T 29-03-2018 CHH28_RS18950 e6862f099bbcf355464b82497cc58506 1229 SUPERFAMILY SSF117143 1070 1191 7.45E-44 T 29-03-2018 CHH28_RS18950 e6862f099bbcf355464b82497cc58506 1229 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 1167 1229 8.3E-15 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CHH28_RS18950 e6862f099bbcf355464b82497cc58506 1229 Pfam PF07559 Flagellar basal body protein FlaE 955 1111 1.2E-26 T 29-03-2018 IPR011491 Flagellar hook protein FlgE CHH28_RS18950 e6862f099bbcf355464b82497cc58506 1229 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 939 1212 6.2E-51 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CHH28_RS18950 e6862f099bbcf355464b82497cc58506 1229 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 202 6.1E-39 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CHH28_RS18950 e6862f099bbcf355464b82497cc58506 1229 SUPERFAMILY SSF117143 80 172 5.75E-18 T 29-03-2018 CHH28_RS18950 e6862f099bbcf355464b82497cc58506 1229 Gene3D G3DSA:2.60.98.20 923 1112 3.5E-23 T 29-03-2018 IPR011491 Flagellar hook protein FlgE CHH28_RS19755 dea01edb92cb008917e0cfa606e8e2f1 475 Pfam PF02954 Bacterial regulatory protein, Fis family 421 461 1.4E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS19755 dea01edb92cb008917e0cfa606e8e2f1 475 Pfam PF00158 Sigma-54 interaction domain 139 305 9.9E-71 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CHH28_RS19755 dea01edb92cb008917e0cfa606e8e2f1 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 444 464 2.3E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS19755 dea01edb92cb008917e0cfa606e8e2f1 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 444 2.3E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS19755 dea01edb92cb008917e0cfa606e8e2f1 475 SUPERFAMILY SSF52172 2 184 3.56E-44 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS19755 dea01edb92cb008917e0cfa606e8e2f1 475 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 461 2.7E-230 T 29-03-2018 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 CHH28_RS19755 dea01edb92cb008917e0cfa606e8e2f1 475 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CHH28_RS19755 dea01edb92cb008917e0cfa606e8e2f1 475 Gene3D G3DSA:3.40.50.2300 1 138 1.4E-33 T 29-03-2018 CHH28_RS19755 dea01edb92cb008917e0cfa606e8e2f1 475 SMART SM00382 159 302 1.6E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS19755 dea01edb92cb008917e0cfa606e8e2f1 475 SUPERFAMILY SSF52540 138 382 8.83E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS19755 dea01edb92cb008917e0cfa606e8e2f1 475 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CHH28_RS19755 dea01edb92cb008917e0cfa606e8e2f1 475 Pfam PF00072 Response regulator receiver domain 4 113 1.1E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS19755 dea01edb92cb008917e0cfa606e8e2f1 475 Gene3D G3DSA:1.10.10.60 380 464 4.7E-18 T 29-03-2018 CHH28_RS19755 dea01edb92cb008917e0cfa606e8e2f1 475 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 163 176 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CHH28_RS19755 dea01edb92cb008917e0cfa606e8e2f1 475 SMART SM00448 2 113 6.3E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS19755 dea01edb92cb008917e0cfa606e8e2f1 475 Gene3D G3DSA:1.10.8.60 312 379 1.0E-21 T 29-03-2018 CHH28_RS19755 dea01edb92cb008917e0cfa606e8e2f1 475 Gene3D G3DSA:3.40.50.300 139 311 3.8E-31 T 29-03-2018 CHH28_RS19755 dea01edb92cb008917e0cfa606e8e2f1 475 SUPERFAMILY SSF46689 379 464 6.72E-21 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS00050 dea01edb92cb008917e0cfa606e8e2f1 475 Pfam PF02954 Bacterial regulatory protein, Fis family 421 461 1.4E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS00050 dea01edb92cb008917e0cfa606e8e2f1 475 Pfam PF00158 Sigma-54 interaction domain 139 305 9.9E-71 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CHH28_RS00050 dea01edb92cb008917e0cfa606e8e2f1 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 444 464 2.3E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS00050 dea01edb92cb008917e0cfa606e8e2f1 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 444 2.3E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS00050 dea01edb92cb008917e0cfa606e8e2f1 475 SUPERFAMILY SSF52172 2 184 3.56E-44 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS00050 dea01edb92cb008917e0cfa606e8e2f1 475 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 461 2.7E-230 T 29-03-2018 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 CHH28_RS00050 dea01edb92cb008917e0cfa606e8e2f1 475 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CHH28_RS00050 dea01edb92cb008917e0cfa606e8e2f1 475 Gene3D G3DSA:3.40.50.2300 1 138 1.4E-33 T 29-03-2018 CHH28_RS00050 dea01edb92cb008917e0cfa606e8e2f1 475 SMART SM00382 159 302 1.6E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS00050 dea01edb92cb008917e0cfa606e8e2f1 475 SUPERFAMILY SSF52540 138 382 8.83E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS00050 dea01edb92cb008917e0cfa606e8e2f1 475 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CHH28_RS00050 dea01edb92cb008917e0cfa606e8e2f1 475 Pfam PF00072 Response regulator receiver domain 4 113 1.1E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS00050 dea01edb92cb008917e0cfa606e8e2f1 475 Gene3D G3DSA:1.10.10.60 380 464 4.7E-18 T 29-03-2018 CHH28_RS00050 dea01edb92cb008917e0cfa606e8e2f1 475 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 163 176 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CHH28_RS00050 dea01edb92cb008917e0cfa606e8e2f1 475 SMART SM00448 2 113 6.3E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS00050 dea01edb92cb008917e0cfa606e8e2f1 475 Gene3D G3DSA:1.10.8.60 312 379 1.0E-21 T 29-03-2018 CHH28_RS00050 dea01edb92cb008917e0cfa606e8e2f1 475 Gene3D G3DSA:3.40.50.300 139 311 3.8E-31 T 29-03-2018 CHH28_RS00050 dea01edb92cb008917e0cfa606e8e2f1 475 SUPERFAMILY SSF46689 379 464 6.72E-21 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS09965 944c7cee49584b6a3700d1807b9d3f23 169 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 64 101 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CHH28_RS09965 944c7cee49584b6a3700d1807b9d3f23 169 Gene3D G3DSA:3.40.140.10 9 169 8.4E-52 T 29-03-2018 CHH28_RS09965 944c7cee49584b6a3700d1807b9d3f23 169 SUPERFAMILY SSF53927 13 164 1.22E-55 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CHH28_RS09965 944c7cee49584b6a3700d1807b9d3f23 169 Pfam PF14437 MafB19-like deaminase 14 158 1.7E-35 T 29-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CHH28_RS09965 944c7cee49584b6a3700d1807b9d3f23 169 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 19 160 44.63 T 29-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CHH28_RS02855 d64d1564eb710ccf0b8efe11c7b4ee2d 377 SUPERFAMILY SSF50621 240 376 5.44E-21 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CHH28_RS02855 d64d1564eb710ccf0b8efe11c7b4ee2d 377 Gene3D G3DSA:2.40.37.10 248 377 1.9E-19 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CHH28_RS02855 d64d1564eb710ccf0b8efe11c7b4ee2d 377 Gene3D G3DSA:3.20.20.10 28 247 1.2E-27 T 29-03-2018 IPR029066 PLP-binding barrel CHH28_RS02855 d64d1564eb710ccf0b8efe11c7b4ee2d 377 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 29 259 1.2E-18 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CHH28_RS02855 d64d1564eb710ccf0b8efe11c7b4ee2d 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 47 65 1.0E-5 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CHH28_RS02855 d64d1564eb710ccf0b8efe11c7b4ee2d 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 250 269 1.0E-5 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CHH28_RS02855 d64d1564eb710ccf0b8efe11c7b4ee2d 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 68 80 1.0E-5 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CHH28_RS02855 d64d1564eb710ccf0b8efe11c7b4ee2d 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 173 186 1.0E-5 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CHH28_RS02855 d64d1564eb710ccf0b8efe11c7b4ee2d 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 22 354 3.6E-9 T 29-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CHH28_RS02855 d64d1564eb710ccf0b8efe11c7b4ee2d 377 SUPERFAMILY SSF51419 27 262 4.07E-29 T 29-03-2018 IPR029066 PLP-binding barrel CHH28_RS18645 206214ad5c92b38cbf1806c7afecc8b5 160 SUPERFAMILY SSF50341 14 154 3.79E-41 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS18645 206214ad5c92b38cbf1806c7afecc8b5 160 Gene3D G3DSA:2.30.30.40 97 143 1.1E-16 T 29-03-2018 CHH28_RS18645 206214ad5c92b38cbf1806c7afecc8b5 160 Pfam PF01584 CheW-like domain 16 152 2.3E-38 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS18645 206214ad5c92b38cbf1806c7afecc8b5 160 SMART SM00260 12 149 4.7E-50 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS18645 206214ad5c92b38cbf1806c7afecc8b5 160 Gene3D G3DSA:2.40.50.180 33 96 3.3E-23 T 29-03-2018 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 PRINTS PR01180 Arginine decarboxylase signature 461 482 5.9E-65 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 PRINTS PR01180 Arginine decarboxylase signature 486 511 5.9E-65 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 PRINTS PR01180 Arginine decarboxylase signature 169 190 5.9E-65 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 PRINTS PR01180 Arginine decarboxylase signature 320 337 5.9E-65 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 PRINTS PR01180 Arginine decarboxylase signature 537 558 5.9E-65 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 PRINTS PR01180 Arginine decarboxylase signature 84 98 5.9E-65 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 PRINTS PR01180 Arginine decarboxylase signature 143 158 5.9E-65 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 PRINTS PR01180 Arginine decarboxylase signature 60 75 5.9E-65 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 PRINTS PR01180 Arginine decarboxylase signature 193 215 5.9E-65 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 70 340 4.8E-45 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 Gene3D G3DSA:3.20.20.10 73 342 9.7E-40 T 29-03-2018 IPR029066 PLP-binding barrel CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 330 349 1.0E-11 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 236 249 1.0E-11 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 537 550 1.0E-11 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 92 110 1.0E-11 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 Gene3D G3DSA:2.40.37.10 3 72 5.8E-10 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 Gene3D G3DSA:2.40.37.10 388 574 8.8E-55 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 SUPERFAMILY SSF50621 455 562 7.12E-9 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 PIRSF PIRSF001336 3 627 9.2E-227 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 SUPERFAMILY SSF51419 60 342 7.66E-64 T 29-03-2018 IPR029066 PLP-binding barrel CHH28_RS05430 fc3b41a926dfbb7ad82947c02e361a5b 627 TIGRFAM TIGR01273 speA: arginine decarboxylase 6 625 9.8E-231 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CHH28_RS08630 8b07d5a24c427b20a14b0f462b5913c6 489 Pfam PF04963 Sigma-54 factor, core binding domain 122 315 1.2E-59 T 29-03-2018 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 CHH28_RS08630 8b07d5a24c427b20a14b0f462b5913c6 489 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 376 395 - T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08630 8b07d5a24c427b20a14b0f462b5913c6 489 PIRSF PIRSF000774 1 489 7.4E-157 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08630 8b07d5a24c427b20a14b0f462b5913c6 489 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 1.1E-16 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08630 8b07d5a24c427b20a14b0f462b5913c6 489 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 486 6.2E-159 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08630 8b07d5a24c427b20a14b0f462b5913c6 489 Pfam PF04552 Sigma-54, DNA binding domain 329 487 1.9E-71 T 29-03-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding CHH28_RS08630 8b07d5a24c427b20a14b0f462b5913c6 489 PRINTS PR00045 Sigma-54 factor signature 198 215 4.2E-32 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08630 8b07d5a24c427b20a14b0f462b5913c6 489 PRINTS PR00045 Sigma-54 factor signature 462 480 4.2E-32 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08630 8b07d5a24c427b20a14b0f462b5913c6 489 PRINTS PR00045 Sigma-54 factor signature 388 400 4.2E-32 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08630 8b07d5a24c427b20a14b0f462b5913c6 489 PRINTS PR00045 Sigma-54 factor signature 404 415 4.2E-32 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08630 8b07d5a24c427b20a14b0f462b5913c6 489 Gene3D G3DSA:1.10.10.10 334 425 1.2E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS08630 8b07d5a24c427b20a14b0f462b5913c6 489 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 467 474 - T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CHH28_RS00085 a41e1fc18c7d03f2134f97b021280e79 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.1E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS00085 a41e1fc18c7d03f2134f97b021280e79 148 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS00085 a41e1fc18c7d03f2134f97b021280e79 148 SUPERFAMILY SSF54523 7 128 9.42E-15 T 29-03-2018 CHH28_RS00085 a41e1fc18c7d03f2134f97b021280e79 148 Gene3D G3DSA:3.30.700.10 7 147 1.1E-17 T 29-03-2018 CHH28_RS00085 a41e1fc18c7d03f2134f97b021280e79 148 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 3.2E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS13705 02608a16a610445bc8d22be6d0ebfa07 521 SMART SM00448 146 258 4.6E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13705 02608a16a610445bc8d22be6d0ebfa07 521 Gene3D G3DSA:3.60.40.10 268 502 1.1E-13 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CHH28_RS13705 02608a16a610445bc8d22be6d0ebfa07 521 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 320 508 2.8E-18 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CHH28_RS13705 02608a16a610445bc8d22be6d0ebfa07 521 Pfam PF00072 Response regulator receiver domain 149 258 1.6E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13705 02608a16a610445bc8d22be6d0ebfa07 521 Gene3D G3DSA:3.40.50.2300 140 267 4.6E-36 T 29-03-2018 CHH28_RS13705 02608a16a610445bc8d22be6d0ebfa07 521 SUPERFAMILY SSF55874 38 125 1.42E-6 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13705 02608a16a610445bc8d22be6d0ebfa07 521 Pfam PF13581 Histidine kinase-like ATPase domain 11 137 1.5E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13705 02608a16a610445bc8d22be6d0ebfa07 521 SUPERFAMILY SSF52172 145 277 3.7E-37 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS13705 02608a16a610445bc8d22be6d0ebfa07 521 Gene3D G3DSA:3.30.565.10 2 139 2.8E-8 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS16785 49fe94e45e54c98d5c9e13ed9ee336fc 964 SUPERFAMILY SSF53383 935 957 5.08E-93 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS16785 49fe94e45e54c98d5c9e13ed9ee336fc 964 SUPERFAMILY SSF53383 452 893 5.08E-93 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS16785 49fe94e45e54c98d5c9e13ed9ee336fc 964 Gene3D G3DSA:3.90.1150.10 348 447 4.3E-26 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS16785 49fe94e45e54c98d5c9e13ed9ee336fc 964 SUPERFAMILY SSF53383 27 445 2.08E-99 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS16785 49fe94e45e54c98d5c9e13ed9ee336fc 964 Gene3D G3DSA:3.40.640.10 102 347 3.7E-29 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS16785 49fe94e45e54c98d5c9e13ed9ee336fc 964 Gene3D G3DSA:3.40.640.10 524 778 3.4E-36 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS16785 49fe94e45e54c98d5c9e13ed9ee336fc 964 Pfam PF02347 Glycine cleavage system P-protein 465 734 2.2E-6 T 29-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CHH28_RS16785 49fe94e45e54c98d5c9e13ed9ee336fc 964 Pfam PF02347 Glycine cleavage system P-protein 26 445 3.2E-175 T 29-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CHH28_RS16785 49fe94e45e54c98d5c9e13ed9ee336fc 964 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 26 956 0.0 T 29-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CHH28_RS16785 49fe94e45e54c98d5c9e13ed9ee336fc 964 Gene3D G3DSA:3.90.1150.10 779 911 6.3E-45 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS16785 49fe94e45e54c98d5c9e13ed9ee336fc 964 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 9 962 24.855 T 29-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CHH28_RS07290 4d5fa2d53a48bbc7104d73f417e10042 605 SUPERFAMILY SSF55073 405 575 7.85E-23 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS07290 4d5fa2d53a48bbc7104d73f417e10042 605 SUPERFAMILY SSF141868 9 243 1.24E-56 T 29-03-2018 IPR001633 EAL domain CHH28_RS07290 4d5fa2d53a48bbc7104d73f417e10042 605 SMART SM00052 2 244 5.8E-27 T 29-03-2018 IPR001633 EAL domain CHH28_RS07290 4d5fa2d53a48bbc7104d73f417e10042 605 Pfam PF00990 Diguanylate cyclase, GGDEF domain 404 510 2.0E-16 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS07290 4d5fa2d53a48bbc7104d73f417e10042 605 Gene3D G3DSA:3.30.70.270 395 576 2.3E-30 T 29-03-2018 CHH28_RS07290 4d5fa2d53a48bbc7104d73f417e10042 605 SUPERFAMILY SSF54631 271 394 2.81E-13 T 29-03-2018 CHH28_RS07290 4d5fa2d53a48bbc7104d73f417e10042 605 Gene3D G3DSA:3.20.20.450 3 247 5.0E-59 T 29-03-2018 IPR001633 EAL domain CHH28_RS07290 4d5fa2d53a48bbc7104d73f417e10042 605 Pfam PF00571 CBS domain 334 391 1.3E-4 T 29-03-2018 IPR000644 CBS domain CHH28_RS07290 4d5fa2d53a48bbc7104d73f417e10042 605 Gene3D G3DSA:3.10.580.10 254 394 1.6E-14 T 29-03-2018 CHH28_RS07290 4d5fa2d53a48bbc7104d73f417e10042 605 SMART SM00267 388 575 9.5E-11 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS07290 4d5fa2d53a48bbc7104d73f417e10042 605 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 414 504 1.2E-16 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS07290 4d5fa2d53a48bbc7104d73f417e10042 605 Pfam PF00563 EAL domain 10 239 1.6E-48 T 29-03-2018 IPR001633 EAL domain CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 Pfam PF03144 Elongation factor Tu domain 2 218 288 2.7E-11 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 Gene3D G3DSA:2.40.30.10 192 301 8.2E-23 T 29-03-2018 CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 Gene3D G3DSA:3.30.70.870 302 399 1.0E-31 T 29-03-2018 CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 Gene3D G3DSA:3.40.50.300 67 191 2.5E-30 T 29-03-2018 CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 Pfam PF00009 Elongation factor Tu GTP binding domain 4 194 6.3E-57 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 Gene3D G3DSA:2.40.50.250 482 572 5.0E-39 T 29-03-2018 CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 Gene3D G3DSA:3.30.70.240 400 478 8.7E-17 T 29-03-2018 CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 SUPERFAMILY SSF50447 150 298 1.43E-34 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 598 2.1E-284 T 29-03-2018 IPR006298 GTP-binding protein TypA GO:0005525 CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 SUPERFAMILY SSF54980 397 512 1.01E-25 T 29-03-2018 IPR035647 EF-G domain III/V-like CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 SUPERFAMILY SSF52540 3 218 1.73E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 Gene3D G3DSA:3.40.50.300 2 66 4.7E-11 T 29-03-2018 CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 133 3.4E-24 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 Pfam PF00679 Elongation factor G C-terminus 395 477 1.9E-20 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 PRINTS PR00315 GTP-binding elongation factor signature 50 58 3.2E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 PRINTS PR00315 GTP-binding elongation factor signature 7 20 3.2E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 PRINTS PR00315 GTP-binding elongation factor signature 122 131 3.2E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 PRINTS PR00315 GTP-binding elongation factor signature 70 80 3.2E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS03365 2705b8027412414b738648e7502cdda3 602 SUPERFAMILY SSF54980 301 386 3.35E-15 T 29-03-2018 IPR035647 EF-G domain III/V-like CHH28_RS11035 71082a9258685e6c0f15c702626cc679 250 Gene3D G3DSA:3.40.190.10 147 249 1.3E-15 T 29-03-2018 CHH28_RS11035 71082a9258685e6c0f15c702626cc679 250 SMART SM00062 26 248 1.9E-55 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS11035 71082a9258685e6c0f15c702626cc679 250 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CHH28_RS11035 71082a9258685e6c0f15c702626cc679 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 245 7.8E-60 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS11035 71082a9258685e6c0f15c702626cc679 250 SUPERFAMILY SSF53850 1 249 3.33E-68 T 29-03-2018 CHH28_RS11035 71082a9258685e6c0f15c702626cc679 250 Gene3D G3DSA:3.40.190.10 13 146 6.2E-37 T 29-03-2018 CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 PRINTS PR00097 Anthranilate synthase component II signature 237 246 1.1E-5 T 29-03-2018 CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 PRINTS PR00097 Anthranilate synthase component II signature 350 363 1.1E-5 T 29-03-2018 CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 PRINTS PR00097 Anthranilate synthase component II signature 265 276 1.1E-5 T 29-03-2018 CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 PRINTS PR00096 Glutamine amidotransferase superfamily signature 350 363 3.2E-11 T 29-03-2018 CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 PRINTS PR00096 Glutamine amidotransferase superfamily signature 265 276 3.2E-11 T 29-03-2018 CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 PRINTS PR00096 Glutamine amidotransferase superfamily signature 237 246 3.2E-11 T 29-03-2018 CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 SUPERFAMILY SSF52317 157 377 2.78E-62 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 Gene3D G3DSA:3.50.30.20 2 155 6.0E-61 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 Pfam PF00117 Glutamine amidotransferase class-I 198 373 1.8E-49 T 29-03-2018 IPR017926 Glutamine amidotransferase CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 377 5.9E-149 T 29-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 3.5E-52 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 Gene3D G3DSA:3.40.50.880 156 380 1.2E-66 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 379 48.706 T 29-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 265 281 1.1E-38 T 29-03-2018 CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 307 318 1.1E-38 T 29-03-2018 CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 195 209 1.1E-38 T 29-03-2018 CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 234 248 1.1E-38 T 29-03-2018 CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 282 299 1.1E-38 T 29-03-2018 CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 SUPERFAMILY SSF52021 4 140 2.75E-57 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS00530 30c476d6344f98d8eb398510e181393c 380 SMART SM01097 3 133 7.6E-90 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS16540 098cb54c5727ae26a736aac0e657e94c 264 Gene3D G3DSA:3.40.50.720 1 262 3.0E-50 T 29-03-2018 CHH28_RS16540 098cb54c5727ae26a736aac0e657e94c 264 SUPERFAMILY SSF69572 4 254 6.8E-64 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CHH28_RS16540 098cb54c5727ae26a736aac0e657e94c 264 Pfam PF00899 ThiF family 16 169 1.2E-36 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CHH28_RS19125 4e90653cd90c9be044b96d0745af647b 240 Gene3D G3DSA:3.40.190.10 159 240 1.6E-7 T 29-03-2018 CHH28_RS19125 4e90653cd90c9be044b96d0745af647b 240 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 239 3.6E-31 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS19125 4e90653cd90c9be044b96d0745af647b 240 Gene3D G3DSA:3.40.190.10 19 158 1.5E-22 T 29-03-2018 CHH28_RS19125 4e90653cd90c9be044b96d0745af647b 240 SUPERFAMILY SSF53850 19 238 1.9E-41 T 29-03-2018 CHH28_RS19125 4e90653cd90c9be044b96d0745af647b 240 SMART SM00062 21 240 3.4E-8 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS11555 bb2d7cd0d63f7b29e70a204e7ffc298c 460 Gene3D G3DSA:3.40.50.2300 23 189 3.9E-36 T 29-03-2018 CHH28_RS11555 bb2d7cd0d63f7b29e70a204e7ffc298c 460 Pfam PF00072 Response regulator receiver domain 34 144 2.9E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS11555 bb2d7cd0d63f7b29e70a204e7ffc298c 460 Gene3D G3DSA:1.10.3210.10 202 392 2.9E-18 T 29-03-2018 CHH28_RS11555 bb2d7cd0d63f7b29e70a204e7ffc298c 460 SMART SM00448 32 144 2.3E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS11555 bb2d7cd0d63f7b29e70a204e7ffc298c 460 SUPERFAMILY SSF109604 233 385 2.2E-9 T 29-03-2018 CHH28_RS11555 bb2d7cd0d63f7b29e70a204e7ffc298c 460 Pfam PF13487 HD domain 279 339 4.7E-16 T 29-03-2018 CHH28_RS11555 bb2d7cd0d63f7b29e70a204e7ffc298c 460 SUPERFAMILY SSF52172 30 198 1.28E-36 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS09365 08c1ebf4a8403553d1cbdb81f87dab33 402 Pfam PF13740 ACT domain 3 79 1.3E-25 T 29-03-2018 CHH28_RS09365 08c1ebf4a8403553d1cbdb81f87dab33 402 Gene3D G3DSA:3.30.70.260 1 95 5.7E-13 T 29-03-2018 CHH28_RS09365 08c1ebf4a8403553d1cbdb81f87dab33 402 Gene3D G3DSA:1.10.150.210 202 248 5.7E-24 T 29-03-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 CHH28_RS09365 08c1ebf4a8403553d1cbdb81f87dab33 402 Pfam PF12710 haloacid dehalogenase-like hydrolase 192 359 1.1E-23 T 29-03-2018 CHH28_RS09365 08c1ebf4a8403553d1cbdb81f87dab33 402 SUPERFAMILY SSF55021 112 185 2.09E-7 T 29-03-2018 CHH28_RS09365 08c1ebf4a8403553d1cbdb81f87dab33 402 Gene3D G3DSA:3.40.50.1000 249 394 1.9E-27 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS09365 08c1ebf4a8403553d1cbdb81f87dab33 402 SUPERFAMILY SSF56784 188 394 2.67E-52 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS09365 08c1ebf4a8403553d1cbdb81f87dab33 402 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 191 361 4.2E-37 T 29-03-2018 CHH28_RS09365 08c1ebf4a8403553d1cbdb81f87dab33 402 Gene3D G3DSA:3.30.70.260 96 187 2.2E-19 T 29-03-2018 CHH28_RS09365 08c1ebf4a8403553d1cbdb81f87dab33 402 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 176 394 8.4E-81 T 29-03-2018 CHH28_RS09365 08c1ebf4a8403553d1cbdb81f87dab33 402 SUPERFAMILY SSF55021 4 81 7.55E-12 T 29-03-2018 CHH28_RS13205 5b16bfd4f35f4b8ecf3f16bb4063d65b 867 Pfam PF00330 Aconitase family (aconitate hydratase) 463 819 3.1E-41 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS13205 5b16bfd4f35f4b8ecf3f16bb4063d65b 867 PIRSF PIRSF036687 1 861 0.0 T 29-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CHH28_RS13205 5b16bfd4f35f4b8ecf3f16bb4063d65b 867 Gene3D G3DSA:3.20.19.10 162 362 2.8E-32 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CHH28_RS13205 5b16bfd4f35f4b8ecf3f16bb4063d65b 867 ProSitePatterns PS01244 Aconitase family signature 2. 763 776 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CHH28_RS13205 5b16bfd4f35f4b8ecf3f16bb4063d65b 867 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 855 0.0 T 29-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CHH28_RS13205 5b16bfd4f35f4b8ecf3f16bb4063d65b 867 Gene3D G3DSA:3.30.499.10 404 522 4.5E-12 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS13205 5b16bfd4f35f4b8ecf3f16bb4063d65b 867 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 381 7.3E-93 T 29-03-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CHH28_RS13205 5b16bfd4f35f4b8ecf3f16bb4063d65b 867 ProSitePatterns PS00450 Aconitase family signature 1. 704 721 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CHH28_RS13205 5b16bfd4f35f4b8ecf3f16bb4063d65b 867 SUPERFAMILY SSF53732 379 859 1.44E-145 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS13205 5b16bfd4f35f4b8ecf3f16bb4063d65b 867 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.2E-66 T 29-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CHH28_RS13205 5b16bfd4f35f4b8ecf3f16bb4063d65b 867 SUPERFAMILY SSF52016 162 371 1.2E-65 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CHH28_RS13205 5b16bfd4f35f4b8ecf3f16bb4063d65b 867 SUPERFAMILY SSF74778 2 159 5.1E-67 T 29-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CHH28_RS13205 5b16bfd4f35f4b8ecf3f16bb4063d65b 867 Gene3D G3DSA:3.30.499.10 685 867 6.0E-49 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS13205 5b16bfd4f35f4b8ecf3f16bb4063d65b 867 Gene3D G3DSA:3.40.1060.10 523 684 4.1E-29 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS01845 f1fd8d034296d0497cbb22f1fc2900ff 377 Gene3D G3DSA:1.10.287.70 7 116 3.0E-12 T 29-03-2018 CHH28_RS01845 f1fd8d034296d0497cbb22f1fc2900ff 377 SUPERFAMILY SSF51735 172 270 3.54E-7 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS01845 f1fd8d034296d0497cbb22f1fc2900ff 377 SUPERFAMILY SSF81324 6 119 3.79E-18 T 29-03-2018 CHH28_RS01845 f1fd8d034296d0497cbb22f1fc2900ff 377 Gene3D G3DSA:3.40.50.720 143 287 1.0E-10 T 29-03-2018 CHH28_RS01845 f1fd8d034296d0497cbb22f1fc2900ff 377 Pfam PF07885 Ion channel 39 107 1.3E-9 T 29-03-2018 IPR013099 Potassium channel domain CHH28_RS19370 3ca7aa8509a1164e9bd2af4dd9c1bbab 306 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 244 8.7E-47 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CHH28_RS19370 3ca7aa8509a1164e9bd2af4dd9c1bbab 306 PRINTS PR00987 Glutamyl-tRNA synthetase signature 4 16 1.3E-12 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CHH28_RS19370 3ca7aa8509a1164e9bd2af4dd9c1bbab 306 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 1.3E-12 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CHH28_RS19370 3ca7aa8509a1164e9bd2af4dd9c1bbab 306 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 1.3E-12 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CHH28_RS19370 3ca7aa8509a1164e9bd2af4dd9c1bbab 306 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 46 1.3E-12 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CHH28_RS19370 3ca7aa8509a1164e9bd2af4dd9c1bbab 306 Gene3D G3DSA:3.40.50.620 1 111 2.2E-27 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS19370 3ca7aa8509a1164e9bd2af4dd9c1bbab 306 SUPERFAMILY SSF52374 3 289 2.37E-77 T 29-03-2018 CHH28_RS19370 3ca7aa8509a1164e9bd2af4dd9c1bbab 306 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 1 299 37.988 T 29-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 CHH28_RS19370 3ca7aa8509a1164e9bd2af4dd9c1bbab 306 Gene3D G3DSA:3.40.50.620 112 231 1.7E-27 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS19370 3ca7aa8509a1164e9bd2af4dd9c1bbab 306 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 2 278 1.9E-102 T 29-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 CHH28_RS01290 5d99199af86eeb7b8e1204ca6cefd0ad 516 Pfam PF00672 HAMP domain 185 233 2.1E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS01290 5d99199af86eeb7b8e1204ca6cefd0ad 516 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 297 479 1.5E-42 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS01290 5d99199af86eeb7b8e1204ca6cefd0ad 516 Gene3D G3DSA:1.10.287.950 185 282 1.2E-4 T 29-03-2018 CHH28_RS01290 5d99199af86eeb7b8e1204ca6cefd0ad 516 SMART SM00304 184 238 1.2E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS01290 5d99199af86eeb7b8e1204ca6cefd0ad 516 Gene3D G3DSA:1.10.287.950 283 486 1.3E-50 T 29-03-2018 CHH28_RS01290 5d99199af86eeb7b8e1204ca6cefd0ad 516 SMART SM00283 253 514 1.9E-64 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS01290 5d99199af86eeb7b8e1204ca6cefd0ad 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 22 47 6.8E-26 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS01290 5d99199af86eeb7b8e1204ca6cefd0ad 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 351 378 6.8E-26 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS01290 5d99199af86eeb7b8e1204ca6cefd0ad 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 409 6.8E-26 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS01290 5d99199af86eeb7b8e1204ca6cefd0ad 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 428 457 6.8E-26 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS01290 5d99199af86eeb7b8e1204ca6cefd0ad 516 SUPERFAMILY SSF58104 206 515 2.88E-71 T 29-03-2018 CHH28_RS06090 81b99c572a0dd6208ad3ffdafd380bc3 177 Pfam PF00347 Ribosomal protein L6 11 82 2.5E-15 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06090 81b99c572a0dd6208ad3ffdafd380bc3 177 Pfam PF00347 Ribosomal protein L6 91 164 4.3E-21 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06090 81b99c572a0dd6208ad3ffdafd380bc3 177 Gene3D G3DSA:3.90.930.12 86 177 9.0E-41 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06090 81b99c572a0dd6208ad3ffdafd380bc3 177 SUPERFAMILY SSF56053 1 82 3.01E-23 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06090 81b99c572a0dd6208ad3ffdafd380bc3 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.853 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CHH28_RS06090 81b99c572a0dd6208ad3ffdafd380bc3 177 Gene3D G3DSA:3.90.930.12 5 85 2.1E-27 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06090 81b99c572a0dd6208ad3ffdafd380bc3 177 SUPERFAMILY SSF56053 83 177 4.19E-37 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06090 81b99c572a0dd6208ad3ffdafd380bc3 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 29-03-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06090 81b99c572a0dd6208ad3ffdafd380bc3 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.0E-76 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CHH28_RS06090 81b99c572a0dd6208ad3ffdafd380bc3 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.2E-34 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CHH28_RS06090 81b99c572a0dd6208ad3ffdafd380bc3 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.2E-34 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CHH28_RS06090 81b99c572a0dd6208ad3ffdafd380bc3 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.2E-34 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CHH28_RS06090 81b99c572a0dd6208ad3ffdafd380bc3 177 PIRSF PIRSF002162 1 177 2.3E-45 T 29-03-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS00905 9f95a8fa2ef364dc608e790198e3031e 176 Pfam PF02954 Bacterial regulatory protein, Fis family 133 173 4.8E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS00905 9f95a8fa2ef364dc608e790198e3031e 176 Pfam PF00072 Response regulator receiver domain 6 113 8.6E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS00905 9f95a8fa2ef364dc608e790198e3031e 176 Gene3D G3DSA:3.40.50.2300 2 124 1.9E-26 T 29-03-2018 CHH28_RS00905 9f95a8fa2ef364dc608e790198e3031e 176 Gene3D G3DSA:1.10.10.60 128 174 1.1E-16 T 29-03-2018 CHH28_RS00905 9f95a8fa2ef364dc608e790198e3031e 176 SMART SM00448 3 114 2.5E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS00905 9f95a8fa2ef364dc608e790198e3031e 176 SUPERFAMILY SSF52172 4 151 5.98E-29 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS00905 9f95a8fa2ef364dc608e790198e3031e 176 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 156 176 2.2E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS00905 9f95a8fa2ef364dc608e790198e3031e 176 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 139 156 2.2E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS12570 cf2c4d9911a8d59a54dcc85590ff8228 140 PIRSF PIRSF003230 1 133 1.1E-48 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CHH28_RS12570 cf2c4d9911a8d59a54dcc85590ff8228 140 Gene3D G3DSA:3.10.129.10 1 139 7.1E-39 T 29-03-2018 CHH28_RS12570 cf2c4d9911a8d59a54dcc85590ff8228 140 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 2 124 5.1E-51 T 29-03-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 CHH28_RS12570 cf2c4d9911a8d59a54dcc85590ff8228 140 SUPERFAMILY SSF54637 2 128 1.75E-41 T 29-03-2018 IPR029069 HotDog domain CHH28_RS12570 cf2c4d9911a8d59a54dcc85590ff8228 140 Pfam PF03061 Thioesterase superfamily 16 100 7.5E-22 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CHH28_RS12570 cf2c4d9911a8d59a54dcc85590ff8228 140 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 6 118 7.1E-35 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CHH28_RS02380 00cbe06964062d82468ff988cf099b70 818 SUPERFAMILY SSF56235 26 716 2.83E-144 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS02380 00cbe06964062d82468ff988cf099b70 818 SUPERFAMILY SSF56235 744 816 2.83E-144 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS02380 00cbe06964062d82468ff988cf099b70 818 Pfam PF01804 Penicillin amidase 30 807 4.4E-123 T 29-03-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 CHH28_RS02380 00cbe06964062d82468ff988cf099b70 818 Gene3D G3DSA:1.10.439.10 20 188 3.2E-35 T 29-03-2018 IPR023343 Penicillin amidase type, domain1 GO:0016811 CHH28_RS02380 00cbe06964062d82468ff988cf099b70 818 Gene3D G3DSA:3.60.20.10 208 810 6.4E-82 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS00365 135399f5dcab438f21a8fded6db61ee8 387 Gene3D G3DSA:3.90.1150.10 281 387 5.6E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS00365 135399f5dcab438f21a8fded6db61ee8 387 Pfam PF00155 Aminotransferase class I and II 41 377 2.6E-55 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CHH28_RS00365 135399f5dcab438f21a8fded6db61ee8 387 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 379 4.9E-138 T 29-03-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CHH28_RS00365 135399f5dcab438f21a8fded6db61ee8 387 SUPERFAMILY SSF53383 2 386 5.65E-103 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS00365 135399f5dcab438f21a8fded6db61ee8 387 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 235 244 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CHH28_RS00365 135399f5dcab438f21a8fded6db61ee8 387 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 383 45.952 T 29-03-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CHH28_RS00365 135399f5dcab438f21a8fded6db61ee8 387 Gene3D G3DSA:3.40.640.10 53 280 1.1E-49 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS18395 e0ab1cd241b342831d81ae4ce18c1f49 266 Pfam PF00717 Peptidase S24-like 73 154 6.7E-20 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CHH28_RS18395 e0ab1cd241b342831d81ae4ce18c1f49 266 ProSitePatterns PS00761 Signal peptidases I signature 3. 215 228 - T 29-03-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CHH28_RS18395 e0ab1cd241b342831d81ae4ce18c1f49 266 SUPERFAMILY SSF51306 65 256 1.2E-60 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CHH28_RS18395 e0ab1cd241b342831d81ae4ce18c1f49 266 Gene3D G3DSA:2.10.109.10 63 265 1.5E-54 T 29-03-2018 CHH28_RS18395 e0ab1cd241b342831d81ae4ce18c1f49 266 ProSitePatterns PS00760 Signal peptidases I lysine active site. 132 144 - T 29-03-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CHH28_RS18395 e0ab1cd241b342831d81ae4ce18c1f49 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 130 142 6.7E-24 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CHH28_RS18395 e0ab1cd241b342831d81ae4ce18c1f49 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 210 229 6.7E-24 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CHH28_RS18395 e0ab1cd241b342831d81ae4ce18c1f49 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 67 83 6.7E-24 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CHH28_RS18395 e0ab1cd241b342831d81ae4ce18c1f49 266 Pfam PF10502 Signal peptidase, peptidase S26 206 248 7.6E-6 T 29-03-2018 IPR019533 Peptidase S26 CHH28_RS18395 e0ab1cd241b342831d81ae4ce18c1f49 266 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 52 249 1.1E-46 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CHH28_RS11195 bfb2756332e499b03615d0e42a9a86e0 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 18.209 T 29-03-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CHH28_RS11195 bfb2756332e499b03615d0e42a9a86e0 877 SUPERFAMILY SSF51621 9 877 6.28E-301 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CHH28_RS11195 bfb2756332e499b03615d0e42a9a86e0 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 136 147 - T 29-03-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CHH28_RS11195 bfb2756332e499b03615d0e42a9a86e0 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 534 546 - T 29-03-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CHH28_RS11195 bfb2756332e499b03615d0e42a9a86e0 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 135 148 7.0E-69 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CHH28_RS11195 bfb2756332e499b03615d0e42a9a86e0 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 532 552 7.0E-69 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CHH28_RS11195 bfb2756332e499b03615d0e42a9a86e0 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 574 603 7.0E-69 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CHH28_RS11195 bfb2756332e499b03615d0e42a9a86e0 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 188 204 7.0E-69 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CHH28_RS11195 bfb2756332e499b03615d0e42a9a86e0 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 247 262 7.0E-69 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CHH28_RS11195 bfb2756332e499b03615d0e42a9a86e0 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 706 732 7.0E-69 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CHH28_RS11195 bfb2756332e499b03615d0e42a9a86e0 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 383 403 7.0E-69 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CHH28_RS11195 bfb2756332e499b03615d0e42a9a86e0 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 131 877 3.8E-282 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CHH28_RS11195 bfb2756332e499b03615d0e42a9a86e0 877 Gene3D G3DSA:1.20.1440.90 276 385 1.9E-26 T 29-03-2018 CHH28_RS11140 146631c43fd5ffc39a62f7869930c58e 122 Pfam PF16137 Domain of unknown function (DUF4845) 31 114 5.0E-16 T 29-03-2018 IPR032314 Protein of unknown function DUF4845 CHH28_RS10830 94103a894a8b1e67fcc5cf69c914efce 816 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 166 9.3E-10 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS10830 94103a894a8b1e67fcc5cf69c914efce 816 Gene3D G3DSA:2.170.130.10 36 174 2.5E-18 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS10830 94103a894a8b1e67fcc5cf69c914efce 816 Gene3D G3DSA:2.40.170.20 175 816 1.7E-65 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS10830 94103a894a8b1e67fcc5cf69c914efce 816 Pfam PF00593 TonB dependent receptor 289 791 1.7E-33 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS10830 94103a894a8b1e67fcc5cf69c914efce 816 SUPERFAMILY SSF56935 555 815 1.1E-97 T 29-03-2018 CHH28_RS10830 94103a894a8b1e67fcc5cf69c914efce 816 SUPERFAMILY SSF56935 41 478 1.1E-97 T 29-03-2018 CHH28_RS10895 57d8c058eaca1535738f373d1272be8f 219 SUPERFAMILY SSF53335 1 216 1.06E-50 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS10895 57d8c058eaca1535738f373d1272be8f 219 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 216 2.4E-75 T 29-03-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 CHH28_RS10895 57d8c058eaca1535738f373d1272be8f 219 PIRSF PIRSF023956 1 219 5.5E-69 T 29-03-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 CHH28_RS10895 57d8c058eaca1535738f373d1272be8f 219 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 216 3.6E-63 T 29-03-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 CHH28_RS10895 57d8c058eaca1535738f373d1272be8f 219 Gene3D G3DSA:3.40.50.150 16 218 1.6E-22 T 29-03-2018 CHH28_RS10895 57d8c058eaca1535738f373d1272be8f 219 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 218 36.06 T 29-03-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 CHH28_RS15865 22da629871546b76c5c577358673a653 318 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 157 315 3.8E-44 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS15865 22da629871546b76c5c577358673a653 318 SMART SM00267 146 318 2.3E-56 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS15865 22da629871546b76c5c577358673a653 318 SUPERFAMILY SSF55073 162 317 4.16E-45 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS15865 22da629871546b76c5c577358673a653 318 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 314 2.2E-46 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS15865 22da629871546b76c5c577358673a653 318 Gene3D G3DSA:3.30.70.270 140 318 9.5E-52 T 29-03-2018 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Gene3D G3DSA:3.40.50.2300 1447 1578 3.0E-10 T 29-03-2018 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Gene3D G3DSA:1.20.120.160 1759 1916 6.7E-21 T 29-03-2018 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Pfam PF00072 Response regulator receiver domain 1589 1705 1.2E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Gene3D G3DSA:3.30.450.20 815 947 2.0E-26 T 29-03-2018 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Gene3D G3DSA:3.30.450.20 1070 1210 5.1E-13 T 29-03-2018 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Gene3D G3DSA:3.30.450.20 948 1069 1.4E-17 T 29-03-2018 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Pfam PF01627 Hpt domain 1790 1868 8.7E-14 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Gene3D G3DSA:1.10.287.130 1211 1273 2.1E-18 T 29-03-2018 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SUPERFAMILY SSF52172 1587 1709 1.22E-35 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SUPERFAMILY SSF47226 1688 1701 2.75E-25 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SUPERFAMILY SSF47226 1769 1865 2.75E-25 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SMART SM00086 1021 1063 0.19 T 29-03-2018 IPR001610 PAC motif CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SMART SM00086 770 811 0.092 T 29-03-2018 IPR001610 PAC motif CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SMART SM00086 892 935 1.5E-10 T 29-03-2018 IPR001610 PAC motif CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SMART SM00086 488 526 80.0 T 29-03-2018 IPR001610 PAC motif CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SMART SM00387 1324 1440 7.5E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Pfam PF13426 PAS domain 428 524 3.7E-11 T 29-03-2018 IPR000014 PAS domain CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SMART SM00073 1780 1880 5.8E-9 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Pfam PF13188 PAS domain 1077 1134 0.0017 T 29-03-2018 IPR000014 PAS domain CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SUPERFAMILY SSF52172 1451 1566 5.27E-9 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Gene3D G3DSA:3.40.50.2300 1582 1739 2.9E-39 T 29-03-2018 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SUPERFAMILY SSF55785 822 938 4.51E-24 T 29-03-2018 IPR000014 PAS domain CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Pfam PF08447 PAS fold 719 803 3.5E-6 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Pfam PF08447 PAS fold 970 1056 6.5E-15 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Pfam PF08447 PAS fold 840 929 8.0E-23 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SUPERFAMILY SSF55781 549 693 1.98E-13 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SUPERFAMILY SSF55785 688 808 3.49E-11 T 29-03-2018 IPR000014 PAS domain CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Gene3D G3DSA:3.30.450.40 533 695 1.4E-17 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Gene3D G3DSA:3.30.450.40 102 245 0.23 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SMART SM00091 947 1015 1.4 T 29-03-2018 IPR000014 PAS domain CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SMART SM00091 816 885 6.2E-5 T 29-03-2018 IPR000014 PAS domain CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SMART SM00091 1075 1145 0.031 T 29-03-2018 IPR000014 PAS domain CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SMART SM00091 412 483 3.2E-6 T 29-03-2018 IPR000014 PAS domain CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Gene3D G3DSA:3.30.450.20 394 532 3.4E-18 T 29-03-2018 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SUPERFAMILY SSF55785 1060 1190 5.33E-10 T 29-03-2018 IPR000014 PAS domain CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1324 1435 3.7E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SMART SM00388 1212 1277 3.7E-23 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SMART SM00448 1586 1705 9.8E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SUPERFAMILY SSF55785 430 534 1.65E-16 T 29-03-2018 IPR000014 PAS domain CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SUPERFAMILY SSF55874 1266 1435 3.54E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Pfam PF01590 GAF domain 612 682 1.9E-7 T 29-03-2018 IPR003018 GAF domain GO:0005515 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Gene3D G3DSA:3.30.565.10 1281 1446 9.3E-45 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 824 942 6.8E-15 T 29-03-2018 IPR000014 PAS domain CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 429 533 3.9E-15 T 29-03-2018 IPR000014 PAS domain CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1212 1276 6.4E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SUPERFAMILY SSF47384 1197 1278 3.73E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1400 1418 2.9E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1383 1393 2.9E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1424 1437 2.9E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1365 1379 2.9E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 Gene3D G3DSA:3.30.450.20 696 814 1.2E-10 T 29-03-2018 CHH28_RS13080 88fca22965d65af478cdd212a4931417 1962 SUPERFAMILY SSF55785 932 1061 8.72E-17 T 29-03-2018 IPR000014 PAS domain CHH28_RS03245 49626a8242de9ba70671c5c669126acf 284 Pfam PF02678 Pirin 15 120 4.9E-33 T 29-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CHH28_RS03245 49626a8242de9ba70671c5c669126acf 284 Gene3D G3DSA:2.60.120.10 3 242 1.2E-59 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS03245 49626a8242de9ba70671c5c669126acf 284 PIRSF PIRSF006232 1 278 1.6E-77 T 29-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CHH28_RS03245 49626a8242de9ba70671c5c669126acf 284 Pfam PF05726 Pirin C-terminal cupin domain 174 270 6.0E-15 T 29-03-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 CHH28_RS03245 49626a8242de9ba70671c5c669126acf 284 SUPERFAMILY SSF51182 10 281 3.51E-73 T 29-03-2018 IPR011051 RmlC-like cupin domain CHH28_RS13865 09468dd936885d843fcd6a341add009b 605 SUPERFAMILY SSF52540 31 222 1.46E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS13865 09468dd936885d843fcd6a341add009b 605 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 363 1.3E-31 T 29-03-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 CHH28_RS13865 09468dd936885d843fcd6a341add009b 605 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.1E-133 T 29-03-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CHH28_RS13865 09468dd936885d843fcd6a341add009b 605 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 476 599 7.3E-16 T 29-03-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS13865 09468dd936885d843fcd6a341add009b 605 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.6E-5 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CHH28_RS13865 09468dd936885d843fcd6a341add009b 605 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.6E-5 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CHH28_RS13865 09468dd936885d843fcd6a341add009b 605 Gene3D G3DSA:1.20.272.10 243 362 2.2E-12 T 29-03-2018 CHH28_RS13865 09468dd936885d843fcd6a341add009b 605 SUPERFAMILY SSF48019 244 363 3.74E-30 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CHH28_RS13865 09468dd936885d843fcd6a341add009b 605 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.5E-43 T 29-03-2018 CHH28_RS13865 09468dd936885d843fcd6a341add009b 605 Gene3D G3DSA:3.40.50.300 1 166 1.7E-39 T 29-03-2018 CHH28_RS13865 09468dd936885d843fcd6a341add009b 605 SMART SM00382 37 177 2.0E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS13865 09468dd936885d843fcd6a341add009b 605 Gene3D G3DSA:1.10.8.60 167 242 3.3E-16 T 29-03-2018 CHH28_RS19250 e13f681467b6e49247cf6f5a6c4da3a4 158 Pfam PF02556 Preprotein translocase subunit SecB 3 141 3.7E-57 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CHH28_RS19250 e13f681467b6e49247cf6f5a6c4da3a4 158 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 3 139 1.6E-52 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CHH28_RS19250 e13f681467b6e49247cf6f5a6c4da3a4 158 Hamap MF_00821 Protein-export protein SecB [secB]. 1 143 33.609 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CHH28_RS19250 e13f681467b6e49247cf6f5a6c4da3a4 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 71 91 2.1E-35 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CHH28_RS19250 e13f681467b6e49247cf6f5a6c4da3a4 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 121 139 2.1E-35 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CHH28_RS19250 e13f681467b6e49247cf6f5a6c4da3a4 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 95 117 2.1E-35 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CHH28_RS19250 e13f681467b6e49247cf6f5a6c4da3a4 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 11 28 2.1E-35 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CHH28_RS19250 e13f681467b6e49247cf6f5a6c4da3a4 158 Gene3D G3DSA:3.10.420.10 1 152 6.9E-55 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CHH28_RS19250 e13f681467b6e49247cf6f5a6c4da3a4 158 SUPERFAMILY SSF54611 3 140 1.98E-53 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CHH28_RS00275 98ba0454d9113811d33f29b1e1eaf20f 302 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 289 4.9E-120 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CHH28_RS00275 98ba0454d9113811d33f29b1e1eaf20f 302 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 4.2E-108 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CHH28_RS00275 98ba0454d9113811d33f29b1e1eaf20f 302 Gene3D G3DSA:3.30.1700.10 128 297 1.8E-65 T 29-03-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CHH28_RS00275 98ba0454d9113811d33f29b1e1eaf20f 302 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 45.939 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CHH28_RS00275 98ba0454d9113811d33f29b1e1eaf20f 302 SUPERFAMILY SSF54211 133 276 6.07E-50 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS00275 98ba0454d9113811d33f29b1e1eaf20f 302 Gene3D G3DSA:3.30.230.20 1 127 3.7E-50 T 29-03-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CHH28_RS00275 98ba0454d9113811d33f29b1e1eaf20f 302 SUPERFAMILY SSF54211 3 125 5.99E-43 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS07710 af4350983d4bd5f9f9df7fb9253dca8f 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 134 4.8E-30 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CHH28_RS07710 af4350983d4bd5f9f9df7fb9253dca8f 333 Pfam PF00107 Zinc-binding dehydrogenase 175 297 1.3E-22 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CHH28_RS07710 af4350983d4bd5f9f9df7fb9253dca8f 333 SUPERFAMILY SSF50129 3 159 1.32E-47 T 29-03-2018 IPR011032 GroES-like CHH28_RS07710 af4350983d4bd5f9f9df7fb9253dca8f 333 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CHH28_RS07710 af4350983d4bd5f9f9df7fb9253dca8f 333 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 168 195 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CHH28_RS07710 af4350983d4bd5f9f9df7fb9253dca8f 333 SMART SM00829 12 331 3.1E-7 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CHH28_RS07710 af4350983d4bd5f9f9df7fb9253dca8f 333 SUPERFAMILY SSF51735 138 302 6.45E-41 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS07710 af4350983d4bd5f9f9df7fb9253dca8f 333 Gene3D G3DSA:3.90.180.10 1 181 6.0E-53 T 29-03-2018 CHH28_RS07710 af4350983d4bd5f9f9df7fb9253dca8f 333 Gene3D G3DSA:3.40.50.20 182 263 2.2E-19 T 29-03-2018 CHH28_RS07710 af4350983d4bd5f9f9df7fb9253dca8f 333 Gene3D G3DSA:3.40.50.20 265 332 5.6E-4 T 29-03-2018 CHH28_RS01555 d820281140fe0f9fabc5dc975f6deb23 288 SUPERFAMILY SSF103481 41 141 1.26E-14 T 29-03-2018 CHH28_RS01555 d820281140fe0f9fabc5dc975f6deb23 288 Pfam PF00892 EamA-like transporter family 143 268 1.3E-10 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS01555 d820281140fe0f9fabc5dc975f6deb23 288 Pfam PF00892 EamA-like transporter family 8 137 2.4E-13 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS01555 d820281140fe0f9fabc5dc975f6deb23 288 SUPERFAMILY SSF103481 178 268 1.44E-11 T 29-03-2018 CHH28_RS15390 32b279fdf006ac30e0069bee485627c3 271 Gene3D G3DSA:2.60.40.1590 22 95 5.7E-16 T 29-03-2018 CHH28_RS15390 32b279fdf006ac30e0069bee485627c3 271 Gene3D G3DSA:2.70.70.10 96 265 6.2E-44 T 29-03-2018 CHH28_RS15390 32b279fdf006ac30e0069bee485627c3 271 Pfam PF01551 Peptidase family M23 164 258 6.3E-30 T 29-03-2018 IPR016047 Peptidase M23 CHH28_RS15390 32b279fdf006ac30e0069bee485627c3 271 SUPERFAMILY SSF51261 98 259 1.83E-52 T 29-03-2018 IPR011055 Duplicated hybrid motif CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 Gene3D G3DSA:3.50.50.60 1 48 3.8E-6 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 SUPERFAMILY SSF55424 349 472 3.78E-42 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 3.9E-77 T 29-03-2018 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.9E-77 T 29-03-2018 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 3.9E-77 T 29-03-2018 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 3.9E-77 T 29-03-2018 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 3.9E-77 T 29-03-2018 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 3.9E-77 T 29-03-2018 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 3.9E-77 T 29-03-2018 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 3.9E-77 T 29-03-2018 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 3.9E-77 T 29-03-2018 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 Gene3D G3DSA:3.30.390.30 344 471 5.3E-44 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 334 3.0E-67 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 PIRSF PIRSF000350 1 471 1.6E-85 T 29-03-2018 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 SUPERFAMILY SSF51905 1 344 1.36E-61 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 1.5E-39 T 29-03-2018 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.5E-39 T 29-03-2018 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 1.5E-39 T 29-03-2018 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 1.5E-39 T 29-03-2018 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 1.5E-39 T 29-03-2018 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 471 8.0E-160 T 29-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 Gene3D G3DSA:3.50.50.60 278 343 4.8E-12 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 Gene3D G3DSA:1.10.287.990 49 112 2.0E-21 T 29-03-2018 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 Gene3D G3DSA:3.50.50.60 124 258 6.2E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS15620 1f42f0cede90557896cdb901620dfb6f 480 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 462 5.1E-39 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 Gene3D G3DSA:3.30.470.20 209 451 8.0E-97 T 29-03-2018 CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 Gene3D G3DSA:3.30.1360.40 819 917 8.3E-28 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 SUPERFAMILY SSF160467 837 929 3.01E-18 T 29-03-2018 CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 Gene3D G3DSA:3.30.1490.20 124 208 3.5E-19 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 SUPERFAMILY SSF50891 647 773 1.55E-32 T 29-03-2018 IPR029000 Cyclophilin-like domain CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 481 766 6.3E-89 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 Pfam PF00364 Biotin-requiring enzyme 1170 1230 2.9E-15 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 837 1055 1.4E-45 T 29-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1231 0.0 T 29-03-2018 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703 CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 SUPERFAMILY SSF51230 1161 1231 2.62E-18 T 29-03-2018 IPR011053 Single hybrid motif CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 SUPERFAMILY SSF50891 952 1084 4.17E-26 T 29-03-2018 IPR029000 Cyclophilin-like domain CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 Gene3D G3DSA:3.40.50.20 1 123 3.3E-47 T 29-03-2018 CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 6.0E-42 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 SUPERFAMILY SSF51246 338 451 4.29E-38 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 Gene3D G3DSA:2.40.100.10 923 1086 1.4E-46 T 29-03-2018 IPR029000 Cyclophilin-like domain CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 SMART SM00797 480 783 9.0E-159 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 Gene3D G3DSA:2.40.50.100 1147 1237 6.6E-21 T 29-03-2018 CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 SUPERFAMILY SSF56059 83 358 1.7E-65 T 29-03-2018 CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 SUPERFAMILY SSF52440 1 112 2.66E-43 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1187 1204 - T 29-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 458 788 2.5E-93 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 Pfam PF02785 Biotin carboxylase C-terminal domain 343 449 2.8E-37 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 SMART SM00878 343 449 2.9E-53 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 320 7.6E-65 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CHH28_RS05040 9b25ea5c5a03fb104dbd832c2b63e87a 1239 SMART SM00796 835 1068 4.7E-100 T 29-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CHH28_RS11120 10bc74dd534bef200c0d0dc1688ba9a2 314 Pfam PF03888 MucB/RseB N-terminal domain 14 188 5.2E-58 T 29-03-2018 IPR033434 MucB/RseB, N-terminal CHH28_RS11120 10bc74dd534bef200c0d0dc1688ba9a2 314 PIRSF PIRSF005427 1 306 1.5E-86 T 29-03-2018 IPR005588 MucB/RseB CHH28_RS11120 10bc74dd534bef200c0d0dc1688ba9a2 314 Gene3D G3DSA:2.50.20.10 11 244 2.4E-18 T 29-03-2018 CHH28_RS11120 10bc74dd534bef200c0d0dc1688ba9a2 314 Pfam PF17188 MucB/RseB C-terminal domain 207 302 3.2E-22 T 29-03-2018 IPR033436 MucB/RseB, C-terminal CHH28_RS13845 bc84e753e2998dc4fb041b5f1aeaab37 803 Gene3D G3DSA:3.40.50.300 29 522 2.4E-6 T 29-03-2018 CHH28_RS13845 bc84e753e2998dc4fb041b5f1aeaab37 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 679 698 5.4E-11 T 29-03-2018 CHH28_RS13845 bc84e753e2998dc4fb041b5f1aeaab37 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 649 668 5.4E-11 T 29-03-2018 CHH28_RS13845 bc84e753e2998dc4fb041b5f1aeaab37 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 64 83 5.4E-11 T 29-03-2018 CHH28_RS13845 bc84e753e2998dc4fb041b5f1aeaab37 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 568 584 5.4E-11 T 29-03-2018 CHH28_RS13845 bc84e753e2998dc4fb041b5f1aeaab37 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 709 727 5.4E-11 T 29-03-2018 CHH28_RS13845 bc84e753e2998dc4fb041b5f1aeaab37 803 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 641 759 2.6E-8 T 29-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CHH28_RS13845 bc84e753e2998dc4fb041b5f1aeaab37 803 SUPERFAMILY SSF54211 566 759 3.68E-35 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS13845 bc84e753e2998dc4fb041b5f1aeaab37 803 Gene3D G3DSA:3.30.230.10 546 782 1.7E-30 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CHH28_RS13845 bc84e753e2998dc4fb041b5f1aeaab37 803 SUPERFAMILY SSF52540 309 482 3.79E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS13845 bc84e753e2998dc4fb041b5f1aeaab37 803 SUPERFAMILY SSF52540 34 107 3.79E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS13845 bc84e753e2998dc4fb041b5f1aeaab37 803 Pfam PF13654 AAA domain 28 542 1.8E-169 T 29-03-2018 CHH28_RS13885 4ca907c17e112ca40f745685db7d8420 95 Pfam PF05166 YcgL domain 6 78 4.4E-30 T 29-03-2018 IPR027354 YcgL domain CHH28_RS13885 4ca907c17e112ca40f745685db7d8420 95 SUPERFAMILY SSF160191 2 91 8.37E-35 T 29-03-2018 CHH28_RS13885 4ca907c17e112ca40f745685db7d8420 95 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 4 81 2.0E-17 T 29-03-2018 IPR027354 YcgL domain CHH28_RS13885 4ca907c17e112ca40f745685db7d8420 95 Hamap MF_01866 Protein YcgL [ycgL]. 4 93 24.95 T 29-03-2018 IPR027354 YcgL domain CHH28_RS08690 a6ff528d640800d2f1a3216701c658aa 216 Gene3D G3DSA:3.40.190.10 113 176 1.3E-24 T 29-03-2018 CHH28_RS08690 a6ff528d640800d2f1a3216701c658aa 216 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 4 209 52.455 T 29-03-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 CHH28_RS08690 a6ff528d640800d2f1a3216701c658aa 216 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 144 165 - T 29-03-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 CHH28_RS08690 a6ff528d640800d2f1a3216701c658aa 216 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 5 185 2.4E-54 T 29-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CHH28_RS08690 a6ff528d640800d2f1a3216701c658aa 216 SUPERFAMILY SSF53850 2 208 1.37E-64 T 29-03-2018 CHH28_RS08690 a6ff528d640800d2f1a3216701c658aa 216 Gene3D G3DSA:3.40.190.10 1 112 1.1E-36 T 29-03-2018 CHH28_RS08690 a6ff528d640800d2f1a3216701c658aa 216 Pfam PF01634 ATP phosphoribosyltransferase 54 204 2.8E-46 T 29-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CHH28_RS05975 a994cc277389514f0ea794b79cb2df0b 124 Gene3D G3DSA:1.20.5.710 2 53 5.9E-14 T 29-03-2018 CHH28_RS05975 a994cc277389514f0ea794b79cb2df0b 124 Gene3D G3DSA:3.30.1390.10 54 124 2.4E-31 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CHH28_RS05975 a994cc277389514f0ea794b79cb2df0b 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 124 1.0E-13 T 29-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS05975 a994cc277389514f0ea794b79cb2df0b 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 2.3E-46 T 29-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS05975 a994cc277389514f0ea794b79cb2df0b 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 52 2.6E-17 T 29-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS05975 a994cc277389514f0ea794b79cb2df0b 124 SUPERFAMILY SSF54736 53 124 1.74E-24 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CHH28_RS05975 a994cc277389514f0ea794b79cb2df0b 124 SUPERFAMILY SSF48300 3 60 1.44E-16 T 29-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS05975 a994cc277389514f0ea794b79cb2df0b 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 24.627 T 29-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS05975 a994cc277389514f0ea794b79cb2df0b 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 3.4E-30 T 29-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS10140 a0d22e086f3ef8ae91bc5023b89eb2b0 398 Pfam PF05940 NnrS protein 10 393 5.0E-91 T 29-03-2018 IPR010266 NnrS CHH28_RS05285 529e8c35e82174fef66446d9693dfa92 505 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 306 2.4E-86 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CHH28_RS05285 529e8c35e82174fef66446d9693dfa92 505 SUPERFAMILY SSF53686 5 355 1.31E-108 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CHH28_RS05285 529e8c35e82174fef66446d9693dfa92 505 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 418 504 2.8E-25 T 29-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CHH28_RS05285 529e8c35e82174fef66446d9693dfa92 505 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 320 409 2.2E-22 T 29-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CHH28_RS05285 529e8c35e82174fef66446d9693dfa92 505 SUPERFAMILY SSF55021 410 504 8.5E-28 T 29-03-2018 CHH28_RS05285 529e8c35e82174fef66446d9693dfa92 505 Gene3D G3DSA:3.40.50.1100 28 137 8.4E-34 T 29-03-2018 CHH28_RS05285 529e8c35e82174fef66446d9693dfa92 505 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CHH28_RS05285 529e8c35e82174fef66446d9693dfa92 505 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 4 504 4.6E-241 T 29-03-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CHH28_RS05285 529e8c35e82174fef66446d9693dfa92 505 Gene3D G3DSA:3.40.50.1100 138 320 5.6E-51 T 29-03-2018 CHH28_RS05285 529e8c35e82174fef66446d9693dfa92 505 Gene3D G3DSA:3.40.1020.10 328 505 3.1E-72 T 29-03-2018 CHH28_RS06450 fb1580c536c9dd259f7522b26939db4d 593 SUPERFAMILY SSF53092 6 134 5.93E-18 T 29-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal CHH28_RS06450 fb1580c536c9dd259f7522b26939db4d 593 Pfam PF16188 C-terminal region of peptidase_M24 534 591 1.5E-22 T 29-03-2018 IPR032416 Peptidase M24, C-terminal domain CHH28_RS06450 fb1580c536c9dd259f7522b26939db4d 593 Pfam PF00557 Metallopeptidase family M24 308 524 3.0E-46 T 29-03-2018 IPR000994 Peptidase M24 CHH28_RS06450 fb1580c536c9dd259f7522b26939db4d 593 SUPERFAMILY SSF55920 304 559 6.67E-59 T 29-03-2018 IPR000994 Peptidase M24 CHH28_RS06450 fb1580c536c9dd259f7522b26939db4d 593 Gene3D G3DSA:3.40.350.10 148 296 1.1E-18 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CHH28_RS06450 fb1580c536c9dd259f7522b26939db4d 593 Gene3D G3DSA:3.90.230.10 300 553 8.0E-62 T 29-03-2018 CHH28_RS06450 fb1580c536c9dd259f7522b26939db4d 593 Gene3D G3DSA:3.40.350.10 1 146 3.0E-43 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CHH28_RS06450 fb1580c536c9dd259f7522b26939db4d 593 Pfam PF01321 Creatinase/Prolidase N-terminal domain 7 138 7.6E-20 T 29-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 CHH28_RS06450 fb1580c536c9dd259f7522b26939db4d 593 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 2.9E-33 T 29-03-2018 CHH28_RS15625 122d1c597c4b9c57dc26abd3aa96d4ac 402 Gene3D G3DSA:3.90.1170.30 1 46 1.6E-12 T 29-03-2018 CHH28_RS15625 122d1c597c4b9c57dc26abd3aa96d4ac 402 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 401 5.3E-186 T 29-03-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CHH28_RS15625 122d1c597c4b9c57dc26abd3aa96d4ac 402 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CHH28_RS15625 122d1c597c4b9c57dc26abd3aa96d4ac 402 Gene3D G3DSA:4.10.320.10 111 159 3.0E-20 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CHH28_RS15625 122d1c597c4b9c57dc26abd3aa96d4ac 402 Pfam PF02817 e3 binding domain 109 144 9.2E-16 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CHH28_RS15625 122d1c597c4b9c57dc26abd3aa96d4ac 402 Gene3D G3DSA:2.40.50.100 47 110 0.09 T 29-03-2018 CHH28_RS15625 122d1c597c4b9c57dc26abd3aa96d4ac 402 SUPERFAMILY SSF51230 1 94 4.84E-24 T 29-03-2018 IPR011053 Single hybrid motif CHH28_RS15625 122d1c597c4b9c57dc26abd3aa96d4ac 402 Gene3D G3DSA:3.30.559.10 160 400 5.0E-93 T 29-03-2018 CHH28_RS15625 122d1c597c4b9c57dc26abd3aa96d4ac 402 SUPERFAMILY SSF47005 103 148 2.35E-12 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CHH28_RS15625 122d1c597c4b9c57dc26abd3aa96d4ac 402 SUPERFAMILY SSF52777 173 401 2.89E-91 T 29-03-2018 CHH28_RS15625 122d1c597c4b9c57dc26abd3aa96d4ac 402 Pfam PF00364 Biotin-requiring enzyme 4 74 1.7E-18 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CHH28_RS15625 122d1c597c4b9c57dc26abd3aa96d4ac 402 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 173 400 2.1E-83 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CHH28_RS19510 e43882095f34aba96428f0fd986ae30c 360 Pfam PF12069 Protein of unknown function (DUF3549) 23 350 6.9E-100 T 29-03-2018 IPR021936 Protein of unknown function DUF3549 CHH28_RS19120 1e89f5c7866ed89194bc45d0de62525b 510 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 473 4.6E-36 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS19120 1e89f5c7866ed89194bc45d0de62525b 510 Gene3D G3DSA:1.10.287.950 275 472 8.2E-49 T 29-03-2018 CHH28_RS19120 1e89f5c7866ed89194bc45d0de62525b 510 Gene3D G3DSA:1.10.287.950 175 274 0.028 T 29-03-2018 CHH28_RS19120 1e89f5c7866ed89194bc45d0de62525b 510 SMART SM00304 177 231 5.1E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS19120 1e89f5c7866ed89194bc45d0de62525b 510 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 373 402 8.2E-20 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS19120 1e89f5c7866ed89194bc45d0de62525b 510 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 13 38 8.2E-20 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS19120 1e89f5c7866ed89194bc45d0de62525b 510 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 344 371 8.2E-20 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS19120 1e89f5c7866ed89194bc45d0de62525b 510 SUPERFAMILY SSF58104 199 508 3.92E-61 T 29-03-2018 CHH28_RS19120 1e89f5c7866ed89194bc45d0de62525b 510 SMART SM00283 246 507 5.6E-49 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS01950 48371d7684858428adcdbd656de67740 450 Gene3D G3DSA:3.40.50.150 223 423 5.3E-28 T 29-03-2018 CHH28_RS01950 48371d7684858428adcdbd656de67740 450 SUPERFAMILY SSF53335 251 417 4.34E-28 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS01950 48371d7684858428adcdbd656de67740 450 Pfam PF13489 Methyltransferase domain 254 408 2.2E-17 T 29-03-2018 CHH28_RS01950 48371d7684858428adcdbd656de67740 450 Pfam PF13946 Domain of unknown function (DUF4214) 60 109 3.0E-6 T 29-03-2018 IPR025282 Domain of unknown function DUF4214 CHH28_RS09385 ee8ed23d2c8e84a8f37142c87b41f22e 188 SUPERFAMILY SSF50104 2 63 5.52E-21 T 29-03-2018 IPR008991 Translation protein SH3-like domain CHH28_RS09385 ee8ed23d2c8e84a8f37142c87b41f22e 188 SUPERFAMILY SSF50249 69 129 1.29E-12 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS09385 ee8ed23d2c8e84a8f37142c87b41f22e 188 SUPERFAMILY SSF50249 131 188 1.54E-18 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS09385 ee8ed23d2c8e84a8f37142c87b41f22e 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 29-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site CHH28_RS09385 ee8ed23d2c8e84a8f37142c87b41f22e 188 TIGRFAM TIGR00038 efp: translation elongation factor P 4 188 1.3E-74 T 29-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CHH28_RS09385 ee8ed23d2c8e84a8f37142c87b41f22e 188 Gene3D G3DSA:2.40.50.140 132 187 7.0E-29 T 29-03-2018 CHH28_RS09385 ee8ed23d2c8e84a8f37142c87b41f22e 188 PIRSF PIRSF005901 2 188 5.8E-64 T 29-03-2018 IPR020599 Translation elongation factor P/YeiP CHH28_RS09385 ee8ed23d2c8e84a8f37142c87b41f22e 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 4.2E-18 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CHH28_RS09385 ee8ed23d2c8e84a8f37142c87b41f22e 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 1.7E-26 T 29-03-2018 IPR013185 Translation elongation factor, KOW-like CHH28_RS09385 ee8ed23d2c8e84a8f37142c87b41f22e 188 Hamap MF_00141 Elongation factor P [efp]. 3 188 46.921 T 29-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CHH28_RS09385 ee8ed23d2c8e84a8f37142c87b41f22e 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 3.1E-28 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CHH28_RS09385 ee8ed23d2c8e84a8f37142c87b41f22e 188 Gene3D G3DSA:2.30.30.30 4 63 1.9E-25 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CHH28_RS09385 ee8ed23d2c8e84a8f37142c87b41f22e 188 SMART SM01185 69 124 5.6E-20 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CHH28_RS09385 ee8ed23d2c8e84a8f37142c87b41f22e 188 SMART SM00841 132 187 4.8E-35 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CHH28_RS09385 ee8ed23d2c8e84a8f37142c87b41f22e 188 Gene3D G3DSA:2.40.50.140 67 130 3.8E-20 T 29-03-2018 CHH28_RS12120 88d6c8e2350d411209b65978dec154ae 593 Gene3D G3DSA:3.30.450.20 222 431 1.7E-9 T 29-03-2018 CHH28_RS12120 88d6c8e2350d411209b65978dec154ae 593 SMART SM00304 184 240 0.0018 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS12120 88d6c8e2350d411209b65978dec154ae 593 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 51 156 2.7E-15 T 29-03-2018 IPR033414 Periplasmic sensor domain CHH28_RS12120 88d6c8e2350d411209b65978dec154ae 593 SUPERFAMILY SSF55785 242 366 2.93E-5 T 29-03-2018 IPR000014 PAS domain CHH28_RS18730 7f77acd0a0e5f6659b596d585852887d 253 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 54 250 5.9E-85 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CHH28_RS18730 7f77acd0a0e5f6659b596d585852887d 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 179 199 3.5E-67 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CHH28_RS18730 7f77acd0a0e5f6659b596d585852887d 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 91 110 3.5E-67 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CHH28_RS18730 7f77acd0a0e5f6659b596d585852887d 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 200 221 3.5E-67 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CHH28_RS18730 7f77acd0a0e5f6659b596d585852887d 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 52 71 3.5E-67 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CHH28_RS18730 7f77acd0a0e5f6659b596d585852887d 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 71 91 3.5E-67 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CHH28_RS18730 7f77acd0a0e5f6659b596d585852887d 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 224 249 3.5E-67 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CHH28_RS18730 7f77acd0a0e5f6659b596d585852887d 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 240 250 8.2E-22 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CHH28_RS18730 7f77acd0a0e5f6659b596d585852887d 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 172 184 8.2E-22 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CHH28_RS18730 7f77acd0a0e5f6659b596d585852887d 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 122 136 8.2E-22 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CHH28_RS18730 7f77acd0a0e5f6659b596d585852887d 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 110 122 8.2E-22 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CHH28_RS18730 7f77acd0a0e5f6659b596d585852887d 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 150 162 8.2E-22 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CHH28_RS18730 7f77acd0a0e5f6659b596d585852887d 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 50 59 8.2E-22 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CHH28_RS18730 7f77acd0a0e5f6659b596d585852887d 253 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 227 239 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CHH28_RS18730 7f77acd0a0e5f6659b596d585852887d 253 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 179 194 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CHH28_RS18730 7f77acd0a0e5f6659b596d585852887d 253 Pfam PF00813 FliP family 54 246 6.8E-79 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 Gene3D G3DSA:3.30.450.20 545 685 3.6E-27 T 29-03-2018 CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 Gene3D G3DSA:3.30.450.20 686 826 8.1E-29 T 29-03-2018 CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 951 1118 3.1E-45 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 Pfam PF00990 Diguanylate cyclase, GGDEF domain 954 1114 2.8E-48 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 SUPERFAMILY SSF55785 680 818 4.79E-18 T 29-03-2018 IPR000014 PAS domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 Gene3D G3DSA:3.30.450.20 431 544 1.8E-10 T 29-03-2018 CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 Gene3D G3DSA:3.30.450.20 827 948 1.1E-21 T 29-03-2018 CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 SMART SM00086 901 943 3.1E-5 T 29-03-2018 IPR001610 PAC motif CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 SMART SM00086 640 683 0.039 T 29-03-2018 IPR001610 PAC motif CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 SMART SM00086 378 420 36.0 T 29-03-2018 IPR001610 PAC motif CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 SMART SM00086 778 820 0.12 T 29-03-2018 IPR001610 PAC motif CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 SMART SM00086 512 551 250.0 T 29-03-2018 IPR001610 PAC motif CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 Pfam PF13426 PAS domain 839 942 6.4E-11 T 29-03-2018 IPR000014 PAS domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 Pfam PF13426 PAS domain 461 550 0.031 T 29-03-2018 IPR000014 PAS domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 692 827 5.6E-17 T 29-03-2018 IPR000014 PAS domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 305 427 3.0E-7 T 29-03-2018 IPR000014 PAS domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 832 949 1.8E-17 T 29-03-2018 IPR000014 PAS domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 559 689 7.2E-9 T 29-03-2018 IPR000014 PAS domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 SUPERFAMILY SSF55073 959 1120 3.66E-49 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 SMART SM00267 943 1119 2.4E-63 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 SUPERFAMILY SSF55785 548 681 6.12E-17 T 29-03-2018 IPR000014 PAS domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 Gene3D G3DSA:3.20.20.450 1126 1379 3.8E-109 T 29-03-2018 IPR001633 EAL domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 SMART SM00052 1129 1376 1.4E-132 T 29-03-2018 IPR001633 EAL domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 SUPERFAMILY SSF55785 816 936 2.39E-19 T 29-03-2018 IPR000014 PAS domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 Pfam PF00989 PAS fold 696 817 1.2E-10 T 29-03-2018 IPR013767 PAS fold GO:0006355 CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 SUPERFAMILY SSF55785 319 428 2.09E-9 T 29-03-2018 IPR000014 PAS domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 SMART SM00091 308 375 0.14 T 29-03-2018 IPR000014 PAS domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 SMART SM00091 563 632 1.3E-5 T 29-03-2018 IPR000014 PAS domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 SMART SM00091 695 761 7.4E-10 T 29-03-2018 IPR000014 PAS domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 SMART SM00091 828 895 1.3E-8 T 29-03-2018 IPR000014 PAS domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 SUPERFAMILY SSF55785 417 549 9.14E-8 T 29-03-2018 IPR000014 PAS domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 Gene3D G3DSA:3.30.70.270 949 1125 1.3E-61 T 29-03-2018 CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 Gene3D G3DSA:3.30.450.20 291 430 1.2E-16 T 29-03-2018 CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 Pfam PF00563 EAL domain 1135 1371 3.8E-79 T 29-03-2018 IPR001633 EAL domain CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 Pfam PF08447 PAS fold 590 677 7.3E-8 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 Pfam PF08448 PAS fold 317 421 4.7E-5 T 29-03-2018 IPR013656 PAS fold-4 CHH28_RS09300 65b66022931be7cc4b67d8759b33ba57 1391 SUPERFAMILY SSF141868 1134 1382 5.49E-95 T 29-03-2018 IPR001633 EAL domain CHH28_RS12735 a432f84a21a446eaf6b51e45707e554b 283 Gene3D G3DSA:3.40.190.10 93 169 3.8E-26 T 29-03-2018 CHH28_RS12735 a432f84a21a446eaf6b51e45707e554b 283 SUPERFAMILY SSF53850 5 182 2.39E-56 T 29-03-2018 CHH28_RS12735 a432f84a21a446eaf6b51e45707e554b 283 Gene3D G3DSA:3.30.70.260 185 280 8.0E-23 T 29-03-2018 CHH28_RS12735 a432f84a21a446eaf6b51e45707e554b 283 Gene3D G3DSA:3.40.190.10 2 92 4.1E-30 T 29-03-2018 CHH28_RS12735 a432f84a21a446eaf6b51e45707e554b 283 SUPERFAMILY SSF55021 176 274 9.16E-21 T 29-03-2018 CHH28_RS12735 a432f84a21a446eaf6b51e45707e554b 283 Pfam PF00800 Prephenate dehydratase 5 181 2.4E-55 T 29-03-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CHH28_RS12735 a432f84a21a446eaf6b51e45707e554b 283 PIRSF PIRSF001500 2 276 1.1E-62 T 29-03-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CHH28_RS00555 05682c09b68095f7d4c7cbba021b5dc6 190 Pfam PF01025 GrpE 20 181 4.7E-52 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CHH28_RS00555 05682c09b68095f7d4c7cbba021b5dc6 190 Gene3D G3DSA:3.90.20.20 2 124 1.5E-26 T 29-03-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CHH28_RS00555 05682c09b68095f7d4c7cbba021b5dc6 190 SUPERFAMILY SSF58014 32 124 8.11E-25 T 29-03-2018 CHH28_RS00555 05682c09b68095f7d4c7cbba021b5dc6 190 PRINTS PR00773 GrpE protein signature 133 148 3.2E-27 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CHH28_RS00555 05682c09b68095f7d4c7cbba021b5dc6 190 PRINTS PR00773 GrpE protein signature 51 67 3.2E-27 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CHH28_RS00555 05682c09b68095f7d4c7cbba021b5dc6 190 PRINTS PR00773 GrpE protein signature 160 179 3.2E-27 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CHH28_RS00555 05682c09b68095f7d4c7cbba021b5dc6 190 PRINTS PR00773 GrpE protein signature 79 94 3.2E-27 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CHH28_RS00555 05682c09b68095f7d4c7cbba021b5dc6 190 SUPERFAMILY SSF51064 126 182 3.79E-20 T 29-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CHH28_RS00555 05682c09b68095f7d4c7cbba021b5dc6 190 ProSitePatterns PS01071 grpE protein signature. 136 179 - T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CHH28_RS00555 05682c09b68095f7d4c7cbba021b5dc6 190 Gene3D G3DSA:2.30.22.10 126 181 7.6E-22 T 29-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CHH28_RS00555 05682c09b68095f7d4c7cbba021b5dc6 190 Hamap MF_01151 Protein GrpE [grpE]. 3 181 21.222 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CHH28_RS08305 519f0dd9f98e335569ffe0acde8a5262 508 Gene3D G3DSA:3.20.20.70 88 501 2.2E-94 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS08305 519f0dd9f98e335569ffe0acde8a5262 508 PIRSF PIRSF006429 2 505 6.2E-156 T 29-03-2018 IPR024188 Glutamate synthase large subunit-like protein CHH28_RS08305 519f0dd9f98e335569ffe0acde8a5262 508 Pfam PF01645 Conserved region in glutamate synthase 131 466 4.4E-83 T 29-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CHH28_RS08305 519f0dd9f98e335569ffe0acde8a5262 508 SUPERFAMILY SSF51395 18 494 1.17E-123 T 29-03-2018 CHH28_RS08695 c1faaba1dd38ea3cdf9a197ba898e72c 436 Gene3D G3DSA:3.40.50.1980 231 376 3.1E-68 T 29-03-2018 CHH28_RS08695 c1faaba1dd38ea3cdf9a197ba898e72c 436 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 6 432 41.161 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CHH28_RS08695 c1faaba1dd38ea3cdf9a197ba898e72c 436 PRINTS PR00083 Histidinol dehydrogenase signature 366 384 1.3E-86 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CHH28_RS08695 c1faaba1dd38ea3cdf9a197ba898e72c 436 PRINTS PR00083 Histidinol dehydrogenase signature 205 230 1.3E-86 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CHH28_RS08695 c1faaba1dd38ea3cdf9a197ba898e72c 436 PRINTS PR00083 Histidinol dehydrogenase signature 37 61 1.3E-86 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CHH28_RS08695 c1faaba1dd38ea3cdf9a197ba898e72c 436 PRINTS PR00083 Histidinol dehydrogenase signature 234 255 1.3E-86 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CHH28_RS08695 c1faaba1dd38ea3cdf9a197ba898e72c 436 PRINTS PR00083 Histidinol dehydrogenase signature 175 201 1.3E-86 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CHH28_RS08695 c1faaba1dd38ea3cdf9a197ba898e72c 436 PRINTS PR00083 Histidinol dehydrogenase signature 325 350 1.3E-86 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CHH28_RS08695 c1faaba1dd38ea3cdf9a197ba898e72c 436 PRINTS PR00083 Histidinol dehydrogenase signature 141 167 1.3E-86 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CHH28_RS08695 c1faaba1dd38ea3cdf9a197ba898e72c 436 PRINTS PR00083 Histidinol dehydrogenase signature 256 275 1.3E-86 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CHH28_RS08695 c1faaba1dd38ea3cdf9a197ba898e72c 436 SUPERFAMILY SSF53720 31 432 2.35E-86 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CHH28_RS08695 c1faaba1dd38ea3cdf9a197ba898e72c 436 PIRSF PIRSF000099 3 433 5.1E-161 T 29-03-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CHH28_RS08695 c1faaba1dd38ea3cdf9a197ba898e72c 436 Gene3D G3DSA:3.40.50.1980 30 230 2.4E-89 T 29-03-2018 CHH28_RS08695 c1faaba1dd38ea3cdf9a197ba898e72c 436 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 37 431 7.1E-163 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CHH28_RS08695 c1faaba1dd38ea3cdf9a197ba898e72c 436 Pfam PF00815 Histidinol dehydrogenase 28 431 1.4E-170 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CHH28_RS08695 c1faaba1dd38ea3cdf9a197ba898e72c 436 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 234 266 - T 29-03-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 CHH28_RS10875 cdadd3a6fde0d97650ae4afada33f88d 339 SMART SM00342 255 337 1.6E-27 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS10875 cdadd3a6fde0d97650ae4afada33f88d 339 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 212 1.3E-19 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS10875 cdadd3a6fde0d97650ae4afada33f88d 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 321 3.1E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS10875 cdadd3a6fde0d97650ae4afada33f88d 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 321 337 3.1E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS10875 cdadd3a6fde0d97650ae4afada33f88d 339 SUPERFAMILY SSF46689 290 338 5.38E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS10875 cdadd3a6fde0d97650ae4afada33f88d 339 Gene3D G3DSA:1.10.10.60 106 266 2.9E-5 T 29-03-2018 CHH28_RS10875 cdadd3a6fde0d97650ae4afada33f88d 339 Pfam PF12833 Helix-turn-helix domain 261 338 4.4E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS10875 cdadd3a6fde0d97650ae4afada33f88d 339 Gene3D G3DSA:1.10.10.10 287 306 0.14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS10875 cdadd3a6fde0d97650ae4afada33f88d 339 Gene3D G3DSA:1.10.10.10 267 286 0.0098 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS10875 cdadd3a6fde0d97650ae4afada33f88d 339 Gene3D G3DSA:1.10.10.60 307 339 1.7E-16 T 29-03-2018 CHH28_RS14040 1e2519cea76c15e03e04c9841cb5c0cf 90 Gene3D G3DSA:4.10.520.10 1 90 3.3E-34 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CHH28_RS14040 1e2519cea76c15e03e04c9841cb5c0cf 90 SUPERFAMILY SSF47729 1 90 6.04E-32 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CHH28_RS14040 1e2519cea76c15e03e04c9841cb5c0cf 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.7E-33 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS14040 1e2519cea76c15e03e04c9841cb5c0cf 90 SMART SM00411 1 90 8.2E-43 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS14040 1e2519cea76c15e03e04c9841cb5c0cf 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CHH28_RS14040 1e2519cea76c15e03e04c9841cb5c0cf 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 9.3E-20 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS14040 1e2519cea76c15e03e04c9841cb5c0cf 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 9.3E-20 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS14040 1e2519cea76c15e03e04c9841cb5c0cf 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 9.3E-20 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS15045 835726fb0cb5d00eeccd38715e347c44 402 SUPERFAMILY SSF53383 28 399 1.46E-119 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS15045 835726fb0cb5d00eeccd38715e347c44 402 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 18 398 6.6E-175 T 29-03-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 CHH28_RS15045 835726fb0cb5d00eeccd38715e347c44 402 Gene3D G3DSA:3.90.1150.10 267 402 3.1E-48 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS15045 835726fb0cb5d00eeccd38715e347c44 402 Gene3D G3DSA:3.40.640.10 15 266 4.6E-62 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS15045 835726fb0cb5d00eeccd38715e347c44 402 PIRSF PIRSF001434 5 402 1.5E-132 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CHH28_RS15045 835726fb0cb5d00eeccd38715e347c44 402 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 209 223 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CHH28_RS15045 835726fb0cb5d00eeccd38715e347c44 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 18 398 1.6E-138 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CHH28_RS15045 835726fb0cb5d00eeccd38715e347c44 402 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 19 399 53.389 T 29-03-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 CHH28_RS18765 5ec6547d4e169388c84144db1bef018a 575 Gene3D G3DSA:3.30.565.10 420 574 2.5E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18765 5ec6547d4e169388c84144db1bef018a 575 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 192 381 3.2E-35 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CHH28_RS18765 5ec6547d4e169388c84144db1bef018a 575 SMART SM00331 181 382 5.2E-5 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CHH28_RS18765 5ec6547d4e169388c84144db1bef018a 575 Pfam PF13581 Histidine kinase-like ATPase domain 442 562 1.1E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18765 5ec6547d4e169388c84144db1bef018a 575 SMART SM00448 6 119 5.5E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS18765 5ec6547d4e169388c84144db1bef018a 575 Pfam PF00072 Response regulator receiver domain 8 118 4.4E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS18765 5ec6547d4e169388c84144db1bef018a 575 Gene3D G3DSA:3.40.50.2300 1 135 1.9E-36 T 29-03-2018 CHH28_RS18765 5ec6547d4e169388c84144db1bef018a 575 SUPERFAMILY SSF55874 431 458 3.93E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18765 5ec6547d4e169388c84144db1bef018a 575 SUPERFAMILY SSF55874 489 554 3.93E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18765 5ec6547d4e169388c84144db1bef018a 575 SUPERFAMILY SSF52172 5 146 9.11E-36 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS18765 5ec6547d4e169388c84144db1bef018a 575 Gene3D G3DSA:3.60.40.10 136 382 8.2E-15 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CHH28_RS13965 2fee4d4245b04af062a021a4f451df03 461 Gene3D G3DSA:3.90.76.10 72 193 7.8E-11 T 29-03-2018 CHH28_RS13965 2fee4d4245b04af062a021a4f451df03 461 Gene3D G3DSA:3.40.190.10 195 322 4.6E-12 T 29-03-2018 CHH28_RS13965 2fee4d4245b04af062a021a4f451df03 461 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 97 280 5.4E-21 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CHH28_RS13965 2fee4d4245b04af062a021a4f451df03 461 SUPERFAMILY SSF53850 88 403 5.25E-29 T 29-03-2018 CHH28_RS08980 dbf10e167229709612dc82a67ef2a461 356 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 23 127 1.3E-22 T 29-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CHH28_RS08980 dbf10e167229709612dc82a67ef2a461 356 Gene3D G3DSA:3.40.50.720 147 352 8.3E-38 T 29-03-2018 CHH28_RS08980 dbf10e167229709612dc82a67ef2a461 356 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 221 300 1.2E-9 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CHH28_RS08980 dbf10e167229709612dc82a67ef2a461 356 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 154 204 2.2E-7 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CHH28_RS08980 dbf10e167229709612dc82a67ef2a461 356 SUPERFAMILY SSF53223 5 138 8.0E-40 T 29-03-2018 CHH28_RS08980 dbf10e167229709612dc82a67ef2a461 356 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 29-03-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CHH28_RS08980 dbf10e167229709612dc82a67ef2a461 356 SUPERFAMILY SSF51735 148 347 8.7E-51 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS08980 dbf10e167229709612dc82a67ef2a461 356 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 3.8E-17 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CHH28_RS08980 dbf10e167229709612dc82a67ef2a461 356 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 290 301 3.8E-17 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CHH28_RS08980 dbf10e167229709612dc82a67ef2a461 356 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 180 200 3.8E-17 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CHH28_RS08980 dbf10e167229709612dc82a67ef2a461 356 SMART SM00839 149 355 8.2E-67 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CHH28_RS08980 dbf10e167229709612dc82a67ef2a461 356 PIRSF PIRSF000188 1 355 4.6E-139 T 29-03-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 CHH28_RS08980 dbf10e167229709612dc82a67ef2a461 356 Gene3D G3DSA:3.40.50.10860 1 146 3.3E-45 T 29-03-2018 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 166 8.4E-55 T 29-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 SMART SM00474 307 494 1.1E-43 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 Gene3D G3DSA:3.40.50.1010 3 180 6.2E-68 T 29-03-2018 IPR029060 PIN domain-like CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 SMART SM00279 169 204 9.2E-13 T 29-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 SUPERFAMILY SSF53098 310 495 9.28E-60 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 Gene3D G3DSA:3.30.70.370 634 722 2.8E-18 T 29-03-2018 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 Gene3D G3DSA:3.30.70.370 731 905 1.3E-54 T 29-03-2018 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 Gene3D G3DSA:1.20.1060.10 520 633 2.8E-30 T 29-03-2018 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 SMART SM00475 3 264 1.4E-122 T 29-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 852 865 3.6E-81 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 790 801 3.6E-81 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 822 838 3.6E-81 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 707 720 3.6E-81 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 655 670 3.6E-81 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 632 654 3.6E-81 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 768 779 3.6E-81 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 677 700 3.6E-81 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 731 756 3.6E-81 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 SMART SM00482 663 869 1.0E-122 T 29-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 SUPERFAMILY SSF88723 2 166 7.57E-54 T 29-03-2018 IPR029060 PIN domain-like CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 167 267 1.8E-29 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 SUPERFAMILY SSF47807 167 287 1.33E-31 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 SUPERFAMILY SSF56672 500 905 6.34E-157 T 29-03-2018 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 Gene3D G3DSA:3.30.420.10 298 519 1.9E-53 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 TIGRFAM TIGR00593 pola: DNA polymerase I 6 905 1.8E-292 T 29-03-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 Gene3D G3DSA:1.10.150.20 181 265 1.0E-25 T 29-03-2018 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 Pfam PF00476 DNA polymerase family A 529 902 2.1E-157 T 29-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 Pfam PF01612 3'-5' exonuclease 307 494 6.1E-40 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CHH28_RS04930 b2de060fac6758a4e8f7589884b4562c 905 ProSitePatterns PS00447 DNA polymerase family A signature. 731 750 - T 29-03-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS18105 9248e1147e1caf94ef016f31f2d6c6bb 176 SUPERFAMILY SSF55021 5 67 1.26E-11 T 29-03-2018 CHH28_RS18105 9248e1147e1caf94ef016f31f2d6c6bb 176 Pfam PF13740 ACT domain 5 74 7.6E-13 T 29-03-2018 CHH28_RS18105 9248e1147e1caf94ef016f31f2d6c6bb 176 SUPERFAMILY SSF55021 92 169 6.65E-12 T 29-03-2018 CHH28_RS18105 9248e1147e1caf94ef016f31f2d6c6bb 176 Gene3D G3DSA:3.30.70.260 4 80 1.2E-13 T 29-03-2018 CHH28_RS18105 9248e1147e1caf94ef016f31f2d6c6bb 176 Gene3D G3DSA:3.30.70.260 89 174 1.0E-11 T 29-03-2018 CHH28_RS18105 9248e1147e1caf94ef016f31f2d6c6bb 176 PIRSF PIRSF028103 1 175 1.4E-42 T 29-03-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 CHH28_RS05530 cfa6ca071a301d79b5f094121a66eb98 342 Gene3D G3DSA:3.40.50.180 138 335 1.8E-39 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS05530 cfa6ca071a301d79b5f094121a66eb98 342 SUPERFAMILY SSF52738 145 332 2.48E-39 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS05530 cfa6ca071a301d79b5f094121a66eb98 342 Pfam PF01339 CheB methylesterase 150 323 7.9E-35 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 Gene3D G3DSA:2.160.20.10 283 524 4.1E-33 T 29-03-2018 IPR012334 Pectin lyase fold CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 SMART SM00710 347 370 3300.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 SMART SM00710 514 536 2000.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 SMART SM00710 560 582 1100.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 SMART SM00710 583 604 1000.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 SMART SM00710 633 654 2200.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 SMART SM00710 537 559 4.8 T 29-03-2018 IPR006626 Parallel beta-helix repeat CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 SMART SM00710 467 489 520.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 SMART SM00710 422 444 19.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 SMART SM00710 372 398 7100.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 SMART SM00710 399 421 510.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 SMART SM00710 445 466 170.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 531 574 1.2E-8 T 29-03-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 416 459 2.5E-10 T 29-03-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 SMART SM00722 455 604 33.0 T 29-03-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 SMART SM00722 305 443 0.016 T 29-03-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 Pfam PF05048 Periplasmic copper-binding protein (NosD) 498 702 1.3E-26 T 29-03-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 Gene3D G3DSA:2.160.20.10 525 704 8.6E-13 T 29-03-2018 IPR012334 Pectin lyase fold CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 Pfam PF13229 Right handed beta helix region 349 458 3.5E-11 T 29-03-2018 CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 Gene3D G3DSA:3.90.182.10 7 74 1.2E-7 T 29-03-2018 CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 ProSitePatterns PS00018 EF-hand calcium-binding domain. 48 60 - T 29-03-2018 IPR018247 EF-Hand 1, calcium-binding site CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 Gene3D G3DSA:2.60.40.1120 167 277 6.7E-6 T 29-03-2018 CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 SUPERFAMILY SSF51126 277 529 5.43E-34 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 Pfam PF13205 Bacterial Ig-like domain 91 193 1.5E-14 T 29-03-2018 IPR032812 SbsA, Ig-like domain CHH28_RS08320 4585e8356e52b3f64393271d7147543e 727 SUPERFAMILY SSF51126 494 717 1.02E-15 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CHH28_RS05745 2e1dcdfc900a981e4869493aa1403e92 975 SUPERFAMILY SSF81593 831 966 7.38E-27 T 29-03-2018 CHH28_RS05745 2e1dcdfc900a981e4869493aa1403e92 975 Gene3D G3DSA:1.10.4050.10 2 123 1.4E-12 T 29-03-2018 CHH28_RS05745 2e1dcdfc900a981e4869493aa1403e92 975 Gene3D G3DSA:1.10.4050.10 542 651 1.1E-16 T 29-03-2018 CHH28_RS05745 2e1dcdfc900a981e4869493aa1403e92 975 Gene3D G3DSA:3.30.460.10 125 297 2.6E-56 T 29-03-2018 CHH28_RS05745 2e1dcdfc900a981e4869493aa1403e92 975 Gene3D G3DSA:3.30.460.10 652 827 1.2E-57 T 29-03-2018 CHH28_RS05745 2e1dcdfc900a981e4869493aa1403e92 975 SUPERFAMILY SSF81301 34 298 2.22E-76 T 29-03-2018 CHH28_RS05745 2e1dcdfc900a981e4869493aa1403e92 975 Gene3D G3DSA:1.20.120.330 828 969 2.2E-32 T 29-03-2018 CHH28_RS05745 2e1dcdfc900a981e4869493aa1403e92 975 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 41 287 2.3E-75 T 29-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CHH28_RS05745 2e1dcdfc900a981e4869493aa1403e92 975 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 566 820 1.9E-83 T 29-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CHH28_RS05745 2e1dcdfc900a981e4869493aa1403e92 975 SUPERFAMILY SSF81301 539 828 7.85E-82 T 29-03-2018 CHH28_RS05745 2e1dcdfc900a981e4869493aa1403e92 975 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 38 968 18.677 T 29-03-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 CHH28_RS05745 2e1dcdfc900a981e4869493aa1403e92 975 Gene3D G3DSA:1.20.120.330 298 453 3.5E-48 T 29-03-2018 CHH28_RS05745 2e1dcdfc900a981e4869493aa1403e92 975 Pfam PF08335 GlnD PII-uridylyltransferase 310 447 5.9E-45 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CHH28_RS05745 2e1dcdfc900a981e4869493aa1403e92 975 Pfam PF08335 GlnD PII-uridylyltransferase 841 958 3.2E-7 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CHH28_RS05745 2e1dcdfc900a981e4869493aa1403e92 975 SUPERFAMILY SSF81593 300 448 5.73E-44 T 29-03-2018 CHH28_RS01100 904ba57506144c17a09424fc8b2d0962 211 Gene3D G3DSA:1.10.260.40 41 69 1.1E-9 T 29-03-2018 CHH28_RS01100 904ba57506144c17a09424fc8b2d0962 211 SUPERFAMILY SSF46689 9 86 8.21E-20 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS01100 904ba57506144c17a09424fc8b2d0962 211 Gene3D G3DSA:1.10.357.10 70 204 5.4E-26 T 29-03-2018 CHH28_RS01100 904ba57506144c17a09424fc8b2d0962 211 Gene3D G3DSA:1.10.10.60 2 40 2.0E-13 T 29-03-2018 CHH28_RS01100 904ba57506144c17a09424fc8b2d0962 211 Pfam PF08362 YcdC-like protein, C-terminal region 66 207 2.1E-49 T 29-03-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 CHH28_RS01100 904ba57506144c17a09424fc8b2d0962 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 5.9E-15 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS01100 904ba57506144c17a09424fc8b2d0962 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 2.7E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS01100 904ba57506144c17a09424fc8b2d0962 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 2.7E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS01100 904ba57506144c17a09424fc8b2d0962 211 SUPERFAMILY SSF48498 83 207 1.05E-38 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CHH28_RS05935 4c64c2d1276dd53866c90834e0302e62 276 SUPERFAMILY SSF53474 8 266 6.99E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS05935 4c64c2d1276dd53866c90834e0302e62 276 Gene3D G3DSA:3.40.50.1820 1 275 2.0E-40 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS05935 4c64c2d1276dd53866c90834e0302e62 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 222 236 1.4E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS05935 4c64c2d1276dd53866c90834e0302e62 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 1.4E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS05935 4c64c2d1276dd53866c90834e0302e62 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 1.4E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS05935 4c64c2d1276dd53866c90834e0302e62 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 1.4E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS05935 4c64c2d1276dd53866c90834e0302e62 276 Pfam PF12697 Alpha/beta hydrolase family 25 261 3.6E-18 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS08480 16c5886188a974180f2f8b9b0062583f 469 Pfam PF10415 Fumarase C C-terminus 413 466 8.1E-19 T 29-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CHH28_RS08480 16c5886188a974180f2f8b9b0062583f 469 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 467 72.251 T 29-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CHH28_RS08480 16c5886188a974180f2f8b9b0062583f 469 PRINTS PR00145 Argininosuccinate lyase family signature 138 160 1.4E-5 T 29-03-2018 CHH28_RS08480 16c5886188a974180f2f8b9b0062583f 469 PRINTS PR00145 Argininosuccinate lyase family signature 322 338 1.4E-5 T 29-03-2018 CHH28_RS08480 16c5886188a974180f2f8b9b0062583f 469 PRINTS PR00145 Argininosuccinate lyase family signature 180 200 1.4E-5 T 29-03-2018 CHH28_RS08480 16c5886188a974180f2f8b9b0062583f 469 Gene3D G3DSA:1.10.40.30 420 467 4.3E-19 T 29-03-2018 CHH28_RS08480 16c5886188a974180f2f8b9b0062583f 469 Pfam PF00206 Lyase 11 347 5.2E-90 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal CHH28_RS08480 16c5886188a974180f2f8b9b0062583f 469 Gene3D G3DSA:1.20.200.10 143 419 2.5E-71 T 29-03-2018 CHH28_RS08480 16c5886188a974180f2f8b9b0062583f 469 Gene3D G3DSA:1.10.275.10 1 142 1.1E-51 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CHH28_RS08480 16c5886188a974180f2f8b9b0062583f 469 SUPERFAMILY SSF48557 4 465 2.51E-131 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CHH28_RS08480 16c5886188a974180f2f8b9b0062583f 469 PRINTS PR00149 Fumarate lyase superfamily signature 185 203 1.9E-27 T 29-03-2018 IPR000362 Fumarate lyase family CHH28_RS08480 16c5886188a974180f2f8b9b0062583f 469 PRINTS PR00149 Fumarate lyase superfamily signature 322 338 1.9E-27 T 29-03-2018 IPR000362 Fumarate lyase family CHH28_RS08480 16c5886188a974180f2f8b9b0062583f 469 PRINTS PR00149 Fumarate lyase superfamily signature 276 303 1.9E-27 T 29-03-2018 IPR000362 Fumarate lyase family CHH28_RS08480 16c5886188a974180f2f8b9b0062583f 469 PRINTS PR00149 Fumarate lyase superfamily signature 139 157 1.9E-27 T 29-03-2018 IPR000362 Fumarate lyase family CHH28_RS08480 16c5886188a974180f2f8b9b0062583f 469 ProSitePatterns PS00163 Fumarate lyases signature. 322 331 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CHH28_RS13600 a8628b80b06855ec899c2902006bb9a2 293 SUPERFAMILY SSF54637 118 284 6.07E-56 T 29-03-2018 IPR029069 HotDog domain CHH28_RS13600 a8628b80b06855ec899c2902006bb9a2 293 Pfam PF13622 Thioesterase-like superfamily 33 283 1.5E-55 T 29-03-2018 CHH28_RS13600 a8628b80b06855ec899c2902006bb9a2 293 Gene3D G3DSA:3.10.129.10 2 117 1.6E-40 T 29-03-2018 CHH28_RS13600 a8628b80b06855ec899c2902006bb9a2 293 Gene3D G3DSA:3.10.129.10 132 287 4.2E-49 T 29-03-2018 CHH28_RS13600 a8628b80b06855ec899c2902006bb9a2 293 SUPERFAMILY SSF54637 5 115 1.02E-36 T 29-03-2018 IPR029069 HotDog domain CHH28_RS17675 afe68e25b5d519d66341713f04e2b19c 240 Pfam PF13489 Methyltransferase domain 52 206 5.2E-25 T 29-03-2018 CHH28_RS17675 afe68e25b5d519d66341713f04e2b19c 240 SUPERFAMILY SSF53335 17 219 1.1E-46 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS17675 afe68e25b5d519d66341713f04e2b19c 240 Gene3D G3DSA:3.40.50.150 2 237 3.0E-47 T 29-03-2018 CHH28_RS17675 afe68e25b5d519d66341713f04e2b19c 240 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 13 231 2.8E-88 T 29-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CHH28_RS17675 afe68e25b5d519d66341713f04e2b19c 240 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 237 38.621 T 29-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CHH28_RS07615 5cf267b76a63c74e05fb96557602aede 276 SUPERFAMILY SSF46689 228 275 6.72E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS07615 5cf267b76a63c74e05fb96557602aede 276 Gene3D G3DSA:1.10.10.60 243 276 1.4E-12 T 29-03-2018 CHH28_RS07615 5cf267b76a63c74e05fb96557602aede 276 SUPERFAMILY SSF46689 178 225 7.56E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS07615 5cf267b76a63c74e05fb96557602aede 276 Gene3D G3DSA:1.10.10.60 220 242 4.3E-4 T 29-03-2018 CHH28_RS07615 5cf267b76a63c74e05fb96557602aede 276 Pfam PF12833 Helix-turn-helix domain 197 274 8.1E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS07615 5cf267b76a63c74e05fb96557602aede 276 Gene3D G3DSA:2.60.120.10 3 158 1.3E-6 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS07615 5cf267b76a63c74e05fb96557602aede 276 Pfam PF02311 AraC-like ligand binding domain 29 107 7.5E-11 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CHH28_RS07615 5cf267b76a63c74e05fb96557602aede 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 228 269 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CHH28_RS07615 5cf267b76a63c74e05fb96557602aede 276 Gene3D G3DSA:1.10.10.60 171 219 8.7E-12 T 29-03-2018 CHH28_RS07615 5cf267b76a63c74e05fb96557602aede 276 SMART SM00342 191 273 1.5E-28 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS07615 5cf267b76a63c74e05fb96557602aede 276 SUPERFAMILY SSF51215 25 115 6.28E-14 T 29-03-2018 CHH28_RS01605 0ccdb40ded640bd4c6ac3b4bfa8a7db6 454 SUPERFAMILY SSF54211 293 454 6.83E-43 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS01605 0ccdb40ded640bd4c6ac3b4bfa8a7db6 454 Pfam PF13541 Subunit ChlI of Mg-chelatase 345 430 1.0E-9 T 29-03-2018 CHH28_RS01605 0ccdb40ded640bd4c6ac3b4bfa8a7db6 454 Gene3D G3DSA:3.30.230.10 286 454 1.5E-32 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CHH28_RS01605 0ccdb40ded640bd4c6ac3b4bfa8a7db6 454 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 451 5.4E-207 T 29-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CHH28_RS01605 0ccdb40ded640bd4c6ac3b4bfa8a7db6 454 Hamap MF_01498 DNA repair protein RadA [radA]. 21 452 42.434 T 29-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CHH28_RS01605 0ccdb40ded640bd4c6ac3b4bfa8a7db6 454 Gene3D G3DSA:3.40.50.300 73 283 9.3E-38 T 29-03-2018 CHH28_RS01605 0ccdb40ded640bd4c6ac3b4bfa8a7db6 454 PRINTS PR01874 DNA repair protein radA signature 83 111 1.8E-89 T 29-03-2018 CHH28_RS01605 0ccdb40ded640bd4c6ac3b4bfa8a7db6 454 PRINTS PR01874 DNA repair protein radA signature 10 34 1.8E-89 T 29-03-2018 CHH28_RS01605 0ccdb40ded640bd4c6ac3b4bfa8a7db6 454 PRINTS PR01874 DNA repair protein radA signature 124 141 1.8E-89 T 29-03-2018 CHH28_RS01605 0ccdb40ded640bd4c6ac3b4bfa8a7db6 454 PRINTS PR01874 DNA repair protein radA signature 322 345 1.8E-89 T 29-03-2018 CHH28_RS01605 0ccdb40ded640bd4c6ac3b4bfa8a7db6 454 PRINTS PR01874 DNA repair protein radA signature 213 241 1.8E-89 T 29-03-2018 CHH28_RS01605 0ccdb40ded640bd4c6ac3b4bfa8a7db6 454 PRINTS PR01874 DNA repair protein radA signature 174 198 1.8E-89 T 29-03-2018 CHH28_RS01605 0ccdb40ded640bd4c6ac3b4bfa8a7db6 454 PRINTS PR01874 DNA repair protein radA signature 248 274 1.8E-89 T 29-03-2018 CHH28_RS01605 0ccdb40ded640bd4c6ac3b4bfa8a7db6 454 SUPERFAMILY SSF52540 68 287 1.4E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS01605 0ccdb40ded640bd4c6ac3b4bfa8a7db6 454 Pfam PF13481 AAA domain 79 222 8.3E-17 T 29-03-2018 CHH28_RS01605 0ccdb40ded640bd4c6ac3b4bfa8a7db6 454 SMART SM00382 91 244 3.7E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS18985 7cae791e083c60d11a3d7d58b45271bb 101 Pfam PF04316 Anti-sigma-28 factor, FlgM 41 95 3.8E-15 T 29-03-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CHH28_RS18985 7cae791e083c60d11a3d7d58b45271bb 101 Gene3D G3DSA:1.10.287.1160 70 95 2.0E-8 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CHH28_RS18985 7cae791e083c60d11a3d7d58b45271bb 101 SUPERFAMILY SSF101498 21 96 3.92E-15 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CHH28_RS18985 7cae791e083c60d11a3d7d58b45271bb 101 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 97 6.9E-22 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CHH28_RS06285 652535f9b59caca59bbadcb1a4d80ecc 170 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CHH28_RS06285 652535f9b59caca59bbadcb1a4d80ecc 170 SUPERFAMILY SSF55811 2 165 3.93E-24 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CHH28_RS06285 652535f9b59caca59bbadcb1a4d80ecc 170 Gene3D G3DSA:3.90.79.10 36 169 7.3E-18 T 29-03-2018 CHH28_RS06285 652535f9b59caca59bbadcb1a4d80ecc 170 Gene3D G3DSA:2.20.70.10 1 33 8.2E-6 T 29-03-2018 CHH28_RS06285 652535f9b59caca59bbadcb1a4d80ecc 170 Pfam PF00293 NUDIX domain 37 159 3.7E-15 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CHH28_RS01705 e563a9930c51625b1e358e8e8055332f 464 Gene3D G3DSA:1.10.45.10 422 461 1.6E-15 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CHH28_RS01705 e563a9930c51625b1e358e8e8055332f 464 Gene3D G3DSA:3.30.43.10 2 93 6.7E-25 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CHH28_RS01705 e563a9930c51625b1e358e8e8055332f 464 SUPERFAMILY SSF55103 191 462 8.01E-59 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CHH28_RS01705 e563a9930c51625b1e358e8e8055332f 464 Pfam PF01565 FAD binding domain 41 179 1.8E-35 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CHH28_RS01705 e563a9930c51625b1e358e8e8055332f 464 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 461 1.7E-61 T 29-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CHH28_RS01705 e563a9930c51625b1e358e8e8055332f 464 SUPERFAMILY SSF56176 4 217 1.73E-68 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CHH28_RS01705 e563a9930c51625b1e358e8e8055332f 464 Gene3D G3DSA:3.30.465.10 94 239 4.0E-39 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CHH28_RS00770 20750045081bdd3d101fd8f0e41358ac 342 PIRSF PIRSF005963 4 330 5.5E-142 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CHH28_RS00770 20750045081bdd3d101fd8f0e41358ac 342 SMART SM00729 87 297 1.5E-10 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CHH28_RS00770 20750045081bdd3d101fd8f0e41358ac 342 Pfam PF04055 Radical SAM superfamily 92 255 1.3E-13 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CHH28_RS00770 20750045081bdd3d101fd8f0e41358ac 342 Gene3D G3DSA:3.20.20.70 42 321 1.4E-23 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS00770 20750045081bdd3d101fd8f0e41358ac 342 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 35 76 2.8E-9 T 29-03-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CHH28_RS00770 20750045081bdd3d101fd8f0e41358ac 342 SUPERFAMILY SSF102114 52 316 2.49E-59 T 29-03-2018 CHH28_RS00770 20750045081bdd3d101fd8f0e41358ac 342 Hamap MF_00206 Lipoyl synthase [lipA]. 1 327 135.989 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CHH28_RS00770 20750045081bdd3d101fd8f0e41358ac 342 TIGRFAM TIGR00510 lipA: lipoyl synthase 36 323 6.3E-121 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CHH28_RS00270 edc9f61a470c2ed0b53f34a44852f68b 308 Gene3D G3DSA:1.20.1170.10 46 161 4.6E-5 T 29-03-2018 CHH28_RS00270 edc9f61a470c2ed0b53f34a44852f68b 308 SUPERFAMILY SSF51261 165 303 2.93E-55 T 29-03-2018 IPR011055 Duplicated hybrid motif CHH28_RS00270 edc9f61a470c2ed0b53f34a44852f68b 308 Pfam PF01551 Peptidase family M23 206 299 3.0E-33 T 29-03-2018 IPR016047 Peptidase M23 CHH28_RS00270 edc9f61a470c2ed0b53f34a44852f68b 308 Gene3D G3DSA:2.70.70.10 162 307 5.9E-46 T 29-03-2018 CHH28_RS01025 64043995620c2babae5e5ec03f428f79 522 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 321 489 3.2E-41 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS01025 64043995620c2babae5e5ec03f428f79 522 SMART SM00283 260 521 2.4E-61 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS01025 64043995620c2babae5e5ec03f428f79 522 SUPERFAMILY SSF58104 230 522 2.62E-64 T 29-03-2018 CHH28_RS01025 64043995620c2babae5e5ec03f428f79 522 Gene3D G3DSA:1.10.287.950 202 300 0.0012 T 29-03-2018 CHH28_RS01025 64043995620c2babae5e5ec03f428f79 522 Gene3D G3DSA:1.10.287.950 301 522 3.5E-47 T 29-03-2018 CHH28_RS00860 cde57b88c47dbc1bef5237321c802f37 458 Gene3D G3DSA:1.10.579.10 286 458 2.4E-42 T 29-03-2018 CHH28_RS00860 cde57b88c47dbc1bef5237321c802f37 458 Gene3D G3DSA:3.40.50.620 1 147 3.2E-28 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS00860 cde57b88c47dbc1bef5237321c802f37 458 Pfam PF00875 DNA photolyase 3 160 5.0E-25 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CHH28_RS00860 cde57b88c47dbc1bef5237321c802f37 458 Gene3D G3DSA:1.25.40.80 148 285 1.5E-30 T 29-03-2018 CHH28_RS00860 cde57b88c47dbc1bef5237321c802f37 458 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 2 428 1.6E-113 T 29-03-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 CHH28_RS00860 cde57b88c47dbc1bef5237321c802f37 458 Pfam PF03441 FAD binding domain of DNA photolyase 276 453 1.8E-41 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CHH28_RS00860 cde57b88c47dbc1bef5237321c802f37 458 PRINTS PR00147 DNA photolyase signature 324 340 1.4E-11 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CHH28_RS00860 cde57b88c47dbc1bef5237321c802f37 458 PRINTS PR00147 DNA photolyase signature 383 397 1.4E-11 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CHH28_RS00860 cde57b88c47dbc1bef5237321c802f37 458 PRINTS PR00147 DNA photolyase signature 344 362 1.4E-11 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CHH28_RS00860 cde57b88c47dbc1bef5237321c802f37 458 SUPERFAMILY SSF48173 194 454 3.27E-67 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CHH28_RS00860 cde57b88c47dbc1bef5237321c802f37 458 SUPERFAMILY SSF52425 2 177 6.15E-33 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CHH28_RS15860 0224762f97a401399800aaf182c3664d 780 Pfam PF07696 7TMR-DISM extracellular 2 39 168 1.1E-24 T 29-03-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 CHH28_RS15860 0224762f97a401399800aaf182c3664d 780 SUPERFAMILY SSF47384 531 602 2.16E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS15860 0224762f97a401399800aaf182c3664d 780 SUPERFAMILY SSF55874 627 765 2.62E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS15860 0224762f97a401399800aaf182c3664d 780 Gene3D G3DSA:3.30.450.20 377 541 3.7E-15 T 29-03-2018 CHH28_RS15860 0224762f97a401399800aaf182c3664d 780 SMART SM00387 656 765 8.7E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS15860 0224762f97a401399800aaf182c3664d 780 SUPERFAMILY SSF55785 400 524 7.75E-7 T 29-03-2018 IPR000014 PAS domain CHH28_RS15860 0224762f97a401399800aaf182c3664d 780 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 656 764 1.4E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS15860 0224762f97a401399800aaf182c3664d 780 Pfam PF07695 7TM diverse intracellular signalling 183 386 1.2E-44 T 29-03-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 CHH28_RS15860 0224762f97a401399800aaf182c3664d 780 Gene3D G3DSA:1.10.287.130 542 605 1.4E-7 T 29-03-2018 CHH28_RS15860 0224762f97a401399800aaf182c3664d 780 Gene3D G3DSA:3.30.565.10 606 767 1.0E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS15525 629fcc2103814ef5fcc4580609de09cc 725 SUPERFAMILY SSF51645 3 723 3.53E-302 T 29-03-2018 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CHH28_RS15525 629fcc2103814ef5fcc4580609de09cc 725 Gene3D G3DSA:1.10.1860.10 1 88 1.6E-34 T 29-03-2018 CHH28_RS15525 629fcc2103814ef5fcc4580609de09cc 725 Hamap MF_00641 Malate synthase G [glcB]. 1 725 397.958 T 29-03-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CHH28_RS15525 629fcc2103814ef5fcc4580609de09cc 725 Pfam PF01274 Malate synthase 17 699 6.5E-164 T 29-03-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CHH28_RS15525 629fcc2103814ef5fcc4580609de09cc 725 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 724 0.0 T 29-03-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CHH28_RS15525 629fcc2103814ef5fcc4580609de09cc 725 Gene3D G3DSA:3.20.20.360 89 213 1.3E-21 T 29-03-2018 CHH28_RS15525 629fcc2103814ef5fcc4580609de09cc 725 Gene3D G3DSA:3.20.20.360 220 588 1.5E-102 T 29-03-2018 CHH28_RS15525 629fcc2103814ef5fcc4580609de09cc 725 Gene3D G3DSA:1.20.1220.12 592 725 5.1E-45 T 29-03-2018 CHH28_RS07865 5e01410e121cc3794510d99cb851dfe9 351 Pfam PF00591 Glycosyl transferase family, a/b domain 75 328 3.4E-97 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CHH28_RS07865 5e01410e121cc3794510d99cb851dfe9 351 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 336 2.4E-123 T 29-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CHH28_RS07865 5e01410e121cc3794510d99cb851dfe9 351 SUPERFAMILY SSF47648 1 67 8.5E-20 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CHH28_RS07865 5e01410e121cc3794510d99cb851dfe9 351 Gene3D G3DSA:3.40.1030.10 71 347 1.2E-98 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CHH28_RS07865 5e01410e121cc3794510d99cb851dfe9 351 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 64 1.4E-17 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CHH28_RS07865 5e01410e121cc3794510d99cb851dfe9 351 Gene3D G3DSA:1.20.970.10 1 70 1.3E-21 T 29-03-2018 CHH28_RS07865 5e01410e121cc3794510d99cb851dfe9 351 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 338 38.184 T 29-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CHH28_RS07865 5e01410e121cc3794510d99cb851dfe9 351 SUPERFAMILY SSF52418 74 340 1.31E-92 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CHH28_RS18480 5770c2a8182da3f19039e193eed9c949 342 Gene3D G3DSA:2.40.50.140 58 131 8.7E-13 T 29-03-2018 CHH28_RS18480 5770c2a8182da3f19039e193eed9c949 342 Gene3D G3DSA:2.40.50.140 5 57 0.15 T 29-03-2018 CHH28_RS18480 5770c2a8182da3f19039e193eed9c949 342 Gene3D G3DSA:1.10.10.10 224 282 2.3E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS18480 5770c2a8182da3f19039e193eed9c949 342 SMART SM00316 69 130 0.18 T 29-03-2018 IPR022967 RNA-binding domain, S1 CHH28_RS18480 5770c2a8182da3f19039e193eed9c949 342 SMART SM00316 151 213 0.0069 T 29-03-2018 IPR022967 RNA-binding domain, S1 CHH28_RS18480 5770c2a8182da3f19039e193eed9c949 342 SMART SM00316 3 64 57.0 T 29-03-2018 IPR022967 RNA-binding domain, S1 CHH28_RS18480 5770c2a8182da3f19039e193eed9c949 342 Gene3D G3DSA:2.40.50.140 149 222 2.9E-6 T 29-03-2018 CHH28_RS18480 5770c2a8182da3f19039e193eed9c949 342 Pfam PF13509 S1 domain 4 63 1.3E-21 T 29-03-2018 CHH28_RS18480 5770c2a8182da3f19039e193eed9c949 342 Pfam PF13509 S1 domain 70 129 2.7E-8 T 29-03-2018 CHH28_RS14405 c59568d2be62d45e92deddb49f909467 571 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 155 313 3.5E-34 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS14405 c59568d2be62d45e92deddb49f909467 571 SUPERFAMILY SSF141868 335 569 2.48E-71 T 29-03-2018 IPR001633 EAL domain CHH28_RS14405 c59568d2be62d45e92deddb49f909467 571 SUPERFAMILY SSF55073 158 316 5.18E-36 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS14405 c59568d2be62d45e92deddb49f909467 571 SMART SM00267 142 315 5.7E-34 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS14405 c59568d2be62d45e92deddb49f909467 571 Pfam PF00563 EAL domain 335 562 1.0E-57 T 29-03-2018 IPR001633 EAL domain CHH28_RS14405 c59568d2be62d45e92deddb49f909467 571 Gene3D G3DSA:3.30.70.270 160 320 4.5E-42 T 29-03-2018 CHH28_RS14405 c59568d2be62d45e92deddb49f909467 571 SMART SM00052 327 567 2.4E-68 T 29-03-2018 IPR001633 EAL domain CHH28_RS14405 c59568d2be62d45e92deddb49f909467 571 Pfam PF00990 Diguanylate cyclase, GGDEF domain 154 308 6.5E-37 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS14405 c59568d2be62d45e92deddb49f909467 571 Gene3D G3DSA:3.20.20.450 321 570 1.1E-75 T 29-03-2018 IPR001633 EAL domain CHH28_RS14405 c59568d2be62d45e92deddb49f909467 571 Gene3D G3DSA:3.30.450.20 21 159 2.3E-5 T 29-03-2018 CHH28_RS03470 0ec5be4776b1364af1fc5194f2eea905 281 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 278 28.724 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CHH28_RS03470 0ec5be4776b1364af1fc5194f2eea905 281 Gene3D G3DSA:3.90.1280.10 220 275 3.5E-20 T 29-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CHH28_RS03470 0ec5be4776b1364af1fc5194f2eea905 281 Pfam PF01430 Hsp33 protein 5 266 9.4E-82 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CHH28_RS03470 0ec5be4776b1364af1fc5194f2eea905 281 Gene3D G3DSA:3.55.30.10 1 169 1.5E-54 T 29-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CHH28_RS03470 0ec5be4776b1364af1fc5194f2eea905 281 SUPERFAMILY SSF118352 220 276 2.88E-18 T 29-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CHH28_RS03470 0ec5be4776b1364af1fc5194f2eea905 281 SUPERFAMILY SSF64397 5 227 4.32E-65 T 29-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CHH28_RS03470 0ec5be4776b1364af1fc5194f2eea905 281 Gene3D G3DSA:1.10.287.480 175 219 2.6E-21 T 29-03-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain CHH28_RS03470 0ec5be4776b1364af1fc5194f2eea905 281 PIRSF PIRSF005261 1 279 9.1E-74 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CHH28_RS01580 481fa2e37dd63521ed5f2f555e81e9f5 618 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 152 163 - T 29-03-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site CHH28_RS01580 481fa2e37dd63521ed5f2f555e81e9f5 618 Gene3D G3DSA:3.30.70.80 30 118 5.4E-13 T 29-03-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 CHH28_RS01580 481fa2e37dd63521ed5f2f555e81e9f5 618 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 534 590 1.3E-9 T 29-03-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial CHH28_RS01580 481fa2e37dd63521ed5f2f555e81e9f5 618 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 425 493 2.0E-13 T 29-03-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial CHH28_RS01580 481fa2e37dd63521ed5f2f555e81e9f5 618 Gene3D G3DSA:2.60.120.380 509 617 8.0E-10 T 29-03-2018 CHH28_RS01580 481fa2e37dd63521ed5f2f555e81e9f5 618 Pfam PF05922 Peptidase inhibitor I9 40 113 4.2E-5 T 29-03-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 CHH28_RS01580 481fa2e37dd63521ed5f2f555e81e9f5 618 PRINTS PR00723 Subtilisin serine protease family (S8) signature 185 198 2.5E-20 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CHH28_RS01580 481fa2e37dd63521ed5f2f555e81e9f5 618 PRINTS PR00723 Subtilisin serine protease family (S8) signature 147 166 2.5E-20 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CHH28_RS01580 481fa2e37dd63521ed5f2f555e81e9f5 618 PRINTS PR00723 Subtilisin serine protease family (S8) signature 338 354 2.5E-20 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CHH28_RS01580 481fa2e37dd63521ed5f2f555e81e9f5 618 SUPERFAMILY SSF52743 119 375 2.75E-79 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS01580 481fa2e37dd63521ed5f2f555e81e9f5 618 Pfam PF00082 Subtilase family 147 374 2.1E-40 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS01580 481fa2e37dd63521ed5f2f555e81e9f5 618 Gene3D G3DSA:2.60.120.380 410 508 2.3E-13 T 29-03-2018 CHH28_RS01580 481fa2e37dd63521ed5f2f555e81e9f5 618 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 339 349 - T 29-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site CHH28_RS01580 481fa2e37dd63521ed5f2f555e81e9f5 618 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 189 199 - T 29-03-2018 IPR022398 Peptidase S8, subtilisin, His-active site CHH28_RS01580 481fa2e37dd63521ed5f2f555e81e9f5 618 Gene3D G3DSA:3.40.50.200 119 396 1.8E-82 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS01580 481fa2e37dd63521ed5f2f555e81e9f5 618 SUPERFAMILY SSF54897 37 113 2.04E-5 T 29-03-2018 IPR009020 Protease propeptides/proteinase inhibitor I9 CHH28_RS11490 0b2ddcc509b30d94993de2342bfa2b79 164 SMART SM00935 7 161 4.5E-33 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CHH28_RS11490 0b2ddcc509b30d94993de2342bfa2b79 164 SUPERFAMILY SSF111384 18 161 2.48E-27 T 29-03-2018 IPR024930 Skp domain CHH28_RS11490 0b2ddcc509b30d94993de2342bfa2b79 164 Gene3D G3DSA:3.30.910.20 7 161 2.0E-16 T 29-03-2018 CHH28_RS11490 0b2ddcc509b30d94993de2342bfa2b79 164 Pfam PF03938 Outer membrane protein (OmpH-like) 5 160 1.1E-21 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CHH28_RS02635 c9ef265b8f1f89c76f4671b1d939277e 290 SMART SM00871 137 290 9.5E-32 T 29-03-2018 IPR010499 Bacterial transcription activator, effector binding CHH28_RS02635 c9ef265b8f1f89c76f4671b1d939277e 290 SUPERFAMILY SSF46689 11 55 1.16E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS02635 c9ef265b8f1f89c76f4671b1d939277e 290 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 64 106 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CHH28_RS02635 c9ef265b8f1f89c76f4671b1d939277e 290 SUPERFAMILY SSF46689 63 115 4.3E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS02635 c9ef265b8f1f89c76f4671b1d939277e 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 94 110 3.7E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS02635 c9ef265b8f1f89c76f4671b1d939277e 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 79 94 3.7E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS02635 c9ef265b8f1f89c76f4671b1d939277e 290 Pfam PF06445 GyrI-like small molecule binding domain 139 285 8.2E-34 T 29-03-2018 IPR029442 GyrI-like small molecule binding domain CHH28_RS02635 c9ef265b8f1f89c76f4671b1d939277e 290 Gene3D G3DSA:3.20.80.10 121 208 6.5E-11 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain CHH28_RS02635 c9ef265b8f1f89c76f4671b1d939277e 290 Gene3D G3DSA:3.20.80.10 209 287 2.5E-17 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain CHH28_RS02635 c9ef265b8f1f89c76f4671b1d939277e 290 Pfam PF12833 Helix-turn-helix domain 33 111 1.4E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS02635 c9ef265b8f1f89c76f4671b1d939277e 290 SUPERFAMILY SSF55136 139 281 5.23E-33 T 29-03-2018 CHH28_RS02635 c9ef265b8f1f89c76f4671b1d939277e 290 Gene3D G3DSA:1.10.10.60 64 120 3.4E-14 T 29-03-2018 CHH28_RS02635 c9ef265b8f1f89c76f4671b1d939277e 290 SMART SM00342 27 110 1.5E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS02635 c9ef265b8f1f89c76f4671b1d939277e 290 Gene3D G3DSA:1.10.10.60 8 63 9.4E-11 T 29-03-2018 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 SUPERFAMILY SSF47226 430 539 9.03E-14 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 SMART SM01231 1562 1699 9.1E-13 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 SUPERFAMILY SSF50341 1884 2022 8.63E-21 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 SUPERFAMILY SSF47226 986 1095 3.53E-9 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Gene3D G3DSA:1.20.120.160 428 561 9.2E-13 T 29-03-2018 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 SUPERFAMILY SSF47226 841 939 5.36E-19 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Gene3D G3DSA:2.30.30.40 1962 2022 6.9E-16 T 29-03-2018 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Gene3D G3DSA:2.30.30.40 1890 1936 0.67 T 29-03-2018 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Pfam PF01584 CheW-like domain 1890 2024 1.9E-18 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 SMART SM00448 2052 2165 6.3E-42 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 SUPERFAMILY SSF47226 675 797 5.23E-26 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 SMART SM00073 676 773 1.8E-12 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 SMART SM00073 1220 1318 1.4E-12 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 SMART SM00073 1378 1479 1.2E-5 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 SMART SM00073 841 938 0.011 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 SUPERFAMILY SSF52172 2052 2170 1.39E-39 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Gene3D G3DSA:3.40.50.2300 2047 2174 4.4E-40 T 29-03-2018 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Gene3D G3DSA:1.10.287.560 1562 1700 3.2E-12 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 SUPERFAMILY SSF47226 1221 1339 6.15E-29 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Gene3D G3DSA:1.20.120.160 673 835 8.9E-28 T 29-03-2018 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Gene3D G3DSA:1.20.120.160 838 982 4.1E-19 T 29-03-2018 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Gene3D G3DSA:1.20.120.160 3 139 2.2E-13 T 29-03-2018 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Gene3D G3DSA:1.20.120.160 1217 1372 1.2E-31 T 29-03-2018 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Gene3D G3DSA:1.20.120.160 983 1133 7.8E-6 T 29-03-2018 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 1563 1699 1.2E-8 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Gene3D G3DSA:3.30.565.10 1702 1889 1.0E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Pfam PF01627 Hpt domain 1380 1460 9.1E-13 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Pfam PF01627 Hpt domain 843 932 7.4E-11 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Pfam PF01627 Hpt domain 1223 1314 1.6E-15 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Pfam PF01627 Hpt domain 678 769 6.9E-14 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Pfam PF01627 Hpt domain 8 96 1.3E-7 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1845 1863 8.6E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1869 1882 8.6E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1789 1803 8.6E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1748 1884 7.9E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 SMART SM00387 1744 1885 5.9E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 SUPERFAMILY SSF55874 1701 1882 2.1E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Gene3D G3DSA:1.20.120.160 1376 1480 1.0E-16 T 29-03-2018 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 Pfam PF00072 Response regulator receiver domain 2054 2165 3.2E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 SMART SM00260 1877 2022 1.9E-23 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 SUPERFAMILY SSF47226 7 128 6.15E-20 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS05525 907ba4b9d8efa08a0658556938654aca 2174 SUPERFAMILY SSF47226 1378 1480 4.84E-19 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS10145 9619abd7067faaed8661a0cb7a2a0ae8 427 SUPERFAMILY SSF55797 290 424 2.22E-25 T 29-03-2018 IPR014044 CAP domain CHH28_RS10145 9619abd7067faaed8661a0cb7a2a0ae8 427 Gene3D G3DSA:3.40.33.10 285 427 4.5E-19 T 29-03-2018 IPR014044 CAP domain CHH28_RS10145 9619abd7067faaed8661a0cb7a2a0ae8 427 Pfam PF00188 Cysteine-rich secretory protein family 296 423 1.0E-19 T 29-03-2018 IPR014044 CAP domain CHH28_RS03035 b7962d76b62458f0116bb730eb7ffeeb 257 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 252 2.1E-58 T 29-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CHH28_RS03035 b7962d76b62458f0116bb730eb7ffeeb 257 SUPERFAMILY SSF56219 1 253 1.57E-48 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS03035 b7962d76b62458f0116bb730eb7ffeeb 257 Gene3D G3DSA:3.60.10.10 1 257 2.3E-33 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS03035 b7962d76b62458f0116bb730eb7ffeeb 257 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 17 233 1.7E-6 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS14805 aa4dfd278c6b858f6a77cdadba298f7f 205 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 126 202 4.0E-17 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CHH28_RS14805 aa4dfd278c6b858f6a77cdadba298f7f 205 PRINTS PR01374 Gram-negative bacterial tonB protein signature 120 141 3.1E-13 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CHH28_RS14805 aa4dfd278c6b858f6a77cdadba298f7f 205 PRINTS PR01374 Gram-negative bacterial tonB protein signature 160 177 3.1E-13 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CHH28_RS14805 aa4dfd278c6b858f6a77cdadba298f7f 205 PRINTS PR01374 Gram-negative bacterial tonB protein signature 141 159 3.1E-13 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CHH28_RS14805 aa4dfd278c6b858f6a77cdadba298f7f 205 PRINTS PR01374 Gram-negative bacterial tonB protein signature 56 66 3.1E-13 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CHH28_RS14805 aa4dfd278c6b858f6a77cdadba298f7f 205 Gene3D G3DSA:3.30.1150.10 45 205 9.0E-22 T 29-03-2018 CHH28_RS14805 aa4dfd278c6b858f6a77cdadba298f7f 205 SUPERFAMILY SSF74653 117 200 8.24E-25 T 29-03-2018 CHH28_RS14805 aa4dfd278c6b858f6a77cdadba298f7f 205 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 125 202 3.5E-21 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CHH28_RS17050 6492a51cecc24e1e7b1730847a6a313f 523 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 337 488 9.9E-36 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS17050 6492a51cecc24e1e7b1730847a6a313f 523 Pfam PF08447 PAS fold 33 114 2.3E-15 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CHH28_RS17050 6492a51cecc24e1e7b1730847a6a313f 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 359 386 3.8E-19 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS17050 6492a51cecc24e1e7b1730847a6a313f 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 388 417 3.8E-19 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS17050 6492a51cecc24e1e7b1730847a6a313f 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 282 311 3.8E-19 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS17050 6492a51cecc24e1e7b1730847a6a313f 523 Gene3D G3DSA:3.40.50.10600 14 128 5.2E-26 T 29-03-2018 CHH28_RS17050 6492a51cecc24e1e7b1730847a6a313f 523 Gene3D G3DSA:1.10.287.950 203 302 9.1E-7 T 29-03-2018 CHH28_RS17050 6492a51cecc24e1e7b1730847a6a313f 523 Gene3D G3DSA:1.10.287.950 303 515 7.1E-44 T 29-03-2018 CHH28_RS17050 6492a51cecc24e1e7b1730847a6a313f 523 SMART SM00283 261 522 9.8E-43 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS17050 6492a51cecc24e1e7b1730847a6a313f 523 SUPERFAMILY SSF55785 20 114 1.92E-24 T 29-03-2018 IPR000014 PAS domain CHH28_RS17050 6492a51cecc24e1e7b1730847a6a313f 523 SUPERFAMILY SSF58104 245 522 9.59E-57 T 29-03-2018 CHH28_RS17050 6492a51cecc24e1e7b1730847a6a313f 523 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 111 4.6E-14 T 29-03-2018 IPR000014 PAS domain CHH28_RS15910 77de2ba2aa20091f637e9bbd5148e181 148 SMART SM00422 1 69 4.3E-21 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS15910 77de2ba2aa20091f637e9bbd5148e181 148 Gene3D G3DSA:1.10.1660.10 1 55 3.6E-17 T 29-03-2018 CHH28_RS15910 77de2ba2aa20091f637e9bbd5148e181 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.6E-8 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS15910 77de2ba2aa20091f637e9bbd5148e181 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 1.6E-8 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS15910 77de2ba2aa20091f637e9bbd5148e181 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.6E-8 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS15910 77de2ba2aa20091f637e9bbd5148e181 148 Pfam PF00376 MerR family regulatory protein 4 35 4.1E-9 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS15910 77de2ba2aa20091f637e9bbd5148e181 148 Pfam PF09278 MerR, DNA binding 44 106 4.8E-15 T 29-03-2018 IPR015358 Transcription regulator MerR, DNA binding CHH28_RS15910 77de2ba2aa20091f637e9bbd5148e181 148 SUPERFAMILY SSF46955 1 114 3.66E-27 T 29-03-2018 IPR009061 Putative DNA-binding domain CHH28_RS15910 77de2ba2aa20091f637e9bbd5148e181 148 Gene3D G3DSA:1.10.1660.10 56 142 4.4E-18 T 29-03-2018 CHH28_RS04170 2ef754762e9d742085364644d23d139a 385 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 127 139 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CHH28_RS04170 2ef754762e9d742085364644d23d139a 385 SUPERFAMILY SSF47203 232 382 8.7E-47 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS04170 2ef754762e9d742085364644d23d139a 385 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CHH28_RS04170 2ef754762e9d742085364644d23d139a 385 Gene3D G3DSA:1.20.140.10 221 384 4.1E-56 T 29-03-2018 CHH28_RS04170 2ef754762e9d742085364644d23d139a 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 121 2.5E-37 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS04170 2ef754762e9d742085364644d23d139a 385 Gene3D G3DSA:1.10.540.10 1 121 1.5E-41 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS04170 2ef754762e9d742085364644d23d139a 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 220 6.5E-28 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CHH28_RS04170 2ef754762e9d742085364644d23d139a 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 381 1.2E-41 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS04170 2ef754762e9d742085364644d23d139a 385 Gene3D G3DSA:2.40.110.10 122 220 9.3E-40 T 29-03-2018 CHH28_RS04170 2ef754762e9d742085364644d23d139a 385 SUPERFAMILY SSF56645 4 245 7.85E-88 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CHH28_RS00795 ff7638d1bf06a0674eeff08ab82e7e52 1715 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1606 1624 - T 29-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site CHH28_RS00795 ff7638d1bf06a0674eeff08ab82e7e52 1715 Gene3D G3DSA:2.60.500.10 351 503 4.1E-4 T 29-03-2018 CHH28_RS00795 ff7638d1bf06a0674eeff08ab82e7e52 1715 SUPERFAMILY SSF51120 1549 1690 2.22E-21 T 29-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CHH28_RS00795 ff7638d1bf06a0674eeff08ab82e7e52 1715 Gene3D G3DSA:2.60.40.10 197 328 0.0022 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS00795 ff7638d1bf06a0674eeff08ab82e7e52 1715 Gene3D G3DSA:2.60.40.10 69 196 0.0077 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS00795 ff7638d1bf06a0674eeff08ab82e7e52 1715 Gene3D G3DSA:2.60.40.10 993 1145 0.08 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS00795 ff7638d1bf06a0674eeff08ab82e7e52 1715 Gene3D G3DSA:2.60.120.640 1279 1393 0.0014 T 29-03-2018 CHH28_RS00795 ff7638d1bf06a0674eeff08ab82e7e52 1715 Gene3D G3DSA:2.60.120.640 1 68 0.0022 T 29-03-2018 CHH28_RS00795 ff7638d1bf06a0674eeff08ab82e7e52 1715 Gene3D G3DSA:2.60.120.640 1149 1278 5.4E-6 T 29-03-2018 CHH28_RS00795 ff7638d1bf06a0674eeff08ab82e7e52 1715 PRINTS PR00313 NodO calcium binding signature 1592 1600 8.9E-6 T 29-03-2018 CHH28_RS00795 ff7638d1bf06a0674eeff08ab82e7e52 1715 PRINTS PR00313 NodO calcium binding signature 1619 1627 8.9E-6 T 29-03-2018 CHH28_RS00795 ff7638d1bf06a0674eeff08ab82e7e52 1715 PRINTS PR00313 NodO calcium binding signature 1562 1573 8.9E-6 T 29-03-2018 CHH28_RS00795 ff7638d1bf06a0674eeff08ab82e7e52 1715 PRINTS PR00313 NodO calcium binding signature 1628 1637 8.9E-6 T 29-03-2018 CHH28_RS00795 ff7638d1bf06a0674eeff08ab82e7e52 1715 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1615 1633 - T 29-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site CHH28_RS09760 e7f0969b4b129d931a9805a7ca05f270 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 197 9.2E-33 T 29-03-2018 IPR018076 Type II secretion system F domain CHH28_RS09760 e7f0969b4b129d931a9805a7ca05f270 408 Pfam PF00482 Type II secretion system (T2SS), protein F 279 400 8.0E-30 T 29-03-2018 IPR018076 Type II secretion system F domain CHH28_RS09760 e7f0969b4b129d931a9805a7ca05f270 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 70 82 7.3E-15 T 29-03-2018 IPR003004 GspF/PilC family CHH28_RS09760 e7f0969b4b129d931a9805a7ca05f270 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 373 387 7.3E-15 T 29-03-2018 IPR003004 GspF/PilC family CHH28_RS09760 e7f0969b4b129d931a9805a7ca05f270 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 389 408 7.3E-15 T 29-03-2018 IPR003004 GspF/PilC family CHH28_RS09760 e7f0969b4b129d931a9805a7ca05f270 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 169 197 7.3E-15 T 29-03-2018 IPR003004 GspF/PilC family CHH28_RS02140 4873801fa0c90f87ea798e13da05c878 512 Gene3D G3DSA:3.90.1150.10 385 501 6.6E-22 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS02140 4873801fa0c90f87ea798e13da05c878 512 Gene3D G3DSA:3.40.640.10 106 384 6.5E-57 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS02140 4873801fa0c90f87ea798e13da05c878 512 SUPERFAMILY SSF53383 35 499 4.32E-124 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS02140 4873801fa0c90f87ea798e13da05c878 512 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 64 432 1.3E-67 T 29-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 CHH28_RS02140 4873801fa0c90f87ea798e13da05c878 512 Gene3D G3DSA:1.20.1650.10 14 94 7.8E-20 T 29-03-2018 CHH28_RS02140 4873801fa0c90f87ea798e13da05c878 512 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 96 115 5.8E-5 T 29-03-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 CHH28_RS02140 4873801fa0c90f87ea798e13da05c878 512 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 117 135 5.8E-5 T 29-03-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 CHH28_RS02140 4873801fa0c90f87ea798e13da05c878 512 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 370 385 5.8E-5 T 29-03-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 CHH28_RS11250 978a5388a19709c2cf1b83853c8735a2 137 SUPERFAMILY SSF50249 71 135 9.43E-23 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS11250 978a5388a19709c2cf1b83853c8735a2 137 PRINTS PR00050 Cold shock protein signature 109 127 2.9E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CHH28_RS11250 978a5388a19709c2cf1b83853c8735a2 137 PRINTS PR00050 Cold shock protein signature 74 89 2.9E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CHH28_RS11250 978a5388a19709c2cf1b83853c8735a2 137 PRINTS PR00050 Cold shock protein signature 94 103 2.9E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CHH28_RS11250 978a5388a19709c2cf1b83853c8735a2 137 Gene3D G3DSA:2.40.50.140 71 136 1.2E-25 T 29-03-2018 CHH28_RS11250 978a5388a19709c2cf1b83853c8735a2 137 SMART SM00357 73 136 1.2E-25 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CHH28_RS11250 978a5388a19709c2cf1b83853c8735a2 137 ProSitePatterns PS00352 'Cold-shock' domain signature. 85 103 - T 29-03-2018 IPR019844 Cold-shock conserved site CHH28_RS11250 978a5388a19709c2cf1b83853c8735a2 137 Pfam PF00313 'Cold-shock' DNA-binding domain 73 135 7.6E-27 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CHH28_RS12200 91c813e2bf61d30e9a2e9e480e51347c 459 SUPERFAMILY SSF53850 89 360 7.44E-64 T 29-03-2018 CHH28_RS12200 91c813e2bf61d30e9a2e9e480e51347c 459 Pfam PF12849 PBP superfamily domain 88 302 7.6E-31 T 29-03-2018 IPR024370 PBP domain CHH28_RS12200 91c813e2bf61d30e9a2e9e480e51347c 459 Gene3D G3DSA:3.40.190.10 32 159 1.5E-8 T 29-03-2018 CHH28_RS12200 91c813e2bf61d30e9a2e9e480e51347c 459 Gene3D G3DSA:3.40.190.10 160 275 1.4E-31 T 29-03-2018 CHH28_RS12200 91c813e2bf61d30e9a2e9e480e51347c 459 SUPERFAMILY SSF103088 337 448 1.83E-18 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS12200 91c813e2bf61d30e9a2e9e480e51347c 459 Pfam PF00691 OmpA family 349 441 1.1E-12 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS12200 91c813e2bf61d30e9a2e9e480e51347c 459 Gene3D G3DSA:3.30.1330.60 276 458 3.3E-19 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS13690 254bd215d7a40a5745a001bf2056c849 475 Gene3D G3DSA:3.40.50.300 134 315 6.6E-25 T 29-03-2018 CHH28_RS13690 254bd215d7a40a5745a001bf2056c849 475 Gene3D G3DSA:3.40.50.2300 2 133 3.5E-27 T 29-03-2018 CHH28_RS13690 254bd215d7a40a5745a001bf2056c849 475 SMART SM00382 164 307 6.0E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS13690 254bd215d7a40a5745a001bf2056c849 475 Pfam PF00072 Response regulator receiver domain 7 116 2.4E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13690 254bd215d7a40a5745a001bf2056c849 475 Pfam PF00158 Sigma-54 interaction domain 145 310 7.3E-67 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CHH28_RS13690 254bd215d7a40a5745a001bf2056c849 475 SUPERFAMILY SSF46689 357 465 7.17E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS13690 254bd215d7a40a5745a001bf2056c849 475 SMART SM00448 5 116 7.4E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13690 254bd215d7a40a5745a001bf2056c849 475 Pfam PF02954 Bacterial regulatory protein, Fis family 429 465 3.6E-10 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS13690 254bd215d7a40a5745a001bf2056c849 475 SUPERFAMILY SSF52172 5 189 2.13E-37 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS13690 254bd215d7a40a5745a001bf2056c849 475 SUPERFAMILY SSF52540 144 387 1.43E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS13690 254bd215d7a40a5745a001bf2056c849 475 Gene3D G3DSA:1.10.10.60 386 469 7.4E-13 T 29-03-2018 CHH28_RS13690 254bd215d7a40a5745a001bf2056c849 475 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CHH28_RS13690 254bd215d7a40a5745a001bf2056c849 475 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CHH28_RS13690 254bd215d7a40a5745a001bf2056c849 475 Gene3D G3DSA:1.10.8.60 317 385 2.4E-20 T 29-03-2018 CHH28_RS09480 bd316f0b352232f148bff97f87f4ada1 391 TIGRFAM TIGR01933 hflK: HflK protein 84 344 3.8E-98 T 29-03-2018 IPR010201 HflK GO:0016021 CHH28_RS09480 bd316f0b352232f148bff97f87f4ada1 391 SUPERFAMILY SSF117892 113 249 5.89E-24 T 29-03-2018 IPR001107 Band 7 domain CHH28_RS09480 bd316f0b352232f148bff97f87f4ada1 391 Pfam PF12221 Bacterial membrane protein N terminal 1 52 3.1E-15 T 29-03-2018 IPR020980 Menbrane protein HflK, N-terminal CHH28_RS09480 bd316f0b352232f148bff97f87f4ada1 391 Pfam PF01145 SPFH domain / Band 7 family 86 258 9.3E-25 T 29-03-2018 IPR001107 Band 7 domain CHH28_RS09480 bd316f0b352232f148bff97f87f4ada1 391 PRINTS PR00721 Stomatin signature 218 236 5.6E-8 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CHH28_RS09480 bd316f0b352232f148bff97f87f4ada1 391 PRINTS PR00721 Stomatin signature 136 157 5.6E-8 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CHH28_RS09480 bd316f0b352232f148bff97f87f4ada1 391 PRINTS PR00721 Stomatin signature 89 111 5.6E-8 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CHH28_RS09480 bd316f0b352232f148bff97f87f4ada1 391 Gene3D G3DSA:1.20.5.620 238 297 5.8E-6 T 29-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain CHH28_RS09480 bd316f0b352232f148bff97f87f4ada1 391 SMART SM00244 82 242 5.1E-28 T 29-03-2018 IPR001107 Band 7 domain CHH28_RS05095 484ca84b6fb6e64503f53941ee05e1ea 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 133 159 3.7E-12 T 29-03-2018 CHH28_RS05095 484ca84b6fb6e64503f53941ee05e1ea 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 200 220 3.7E-12 T 29-03-2018 CHH28_RS05095 484ca84b6fb6e64503f53941ee05e1ea 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 180 199 3.7E-12 T 29-03-2018 CHH28_RS05095 484ca84b6fb6e64503f53941ee05e1ea 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 162 179 3.7E-12 T 29-03-2018 CHH28_RS05095 484ca84b6fb6e64503f53941ee05e1ea 222 Pfam PF13488 Glycine zipper 34 86 1.1E-5 T 29-03-2018 CHH28_RS05095 484ca84b6fb6e64503f53941ee05e1ea 222 Gene3D G3DSA:3.30.1330.60 84 222 7.9E-39 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS05095 484ca84b6fb6e64503f53941ee05e1ea 222 SUPERFAMILY SSF103088 104 220 2.22E-35 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS05095 484ca84b6fb6e64503f53941ee05e1ea 222 Pfam PF00691 OmpA family 116 211 2.0E-22 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS05095 484ca84b6fb6e64503f53941ee05e1ea 222 PRINTS PR01021 OMPA domain signature 162 178 6.1E-10 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CHH28_RS05095 484ca84b6fb6e64503f53941ee05e1ea 222 PRINTS PR01021 OMPA domain signature 117 139 6.1E-10 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CHH28_RS05095 484ca84b6fb6e64503f53941ee05e1ea 222 PRINTS PR01021 OMPA domain signature 147 162 6.1E-10 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CHH28_RS15050 a29880bc61d107b6ecbb533611e5d89f 509 SUPERFAMILY SSF53271 250 483 2.62E-71 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CHH28_RS15050 a29880bc61d107b6ecbb533611e5d89f 509 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 465 44.104 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CHH28_RS15050 a29880bc61d107b6ecbb533611e5d89f 509 Pfam PF13522 Glutamine amidotransferase domain 66 208 2.5E-13 T 29-03-2018 CHH28_RS15050 a29880bc61d107b6ecbb533611e5d89f 509 Pfam PF00156 Phosphoribosyl transferase domain 277 393 1.8E-8 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CHH28_RS15050 a29880bc61d107b6ecbb533611e5d89f 509 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 465 4.4E-160 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CHH28_RS15050 a29880bc61d107b6ecbb533611e5d89f 509 Gene3D G3DSA:3.40.50.2020 278 444 5.0E-36 T 29-03-2018 CHH28_RS15050 a29880bc61d107b6ecbb533611e5d89f 509 Gene3D G3DSA:3.60.20.10 44 277 2.6E-53 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS15050 a29880bc61d107b6ecbb533611e5d89f 509 PIRSF PIRSF000485 1 479 3.4E-160 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CHH28_RS15050 a29880bc61d107b6ecbb533611e5d89f 509 SUPERFAMILY SSF56235 2 257 4.8E-67 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS11260 7842e72d6f8beb15e18a993567997b66 257 SUPERFAMILY SSF75217 14 174 4.06E-36 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CHH28_RS11260 7842e72d6f8beb15e18a993567997b66 257 Pfam PF00588 SpoU rRNA Methylase family 15 164 5.5E-34 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CHH28_RS11260 7842e72d6f8beb15e18a993567997b66 257 PIRSF PIRSF004808 10 257 7.2E-75 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CHH28_RS11260 7842e72d6f8beb15e18a993567997b66 257 Gene3D G3DSA:3.40.1280.10 4 173 1.7E-42 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CHH28_RS11260 7842e72d6f8beb15e18a993567997b66 257 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 12 251 6.2E-77 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CHH28_RS07155 f8abf950fc27f5815642e9e5375fee66 154 SUPERFAMILY SSF118196 1 153 1.02E-43 T 29-03-2018 IPR023370 TsaA-like domain CHH28_RS07155 f8abf950fc27f5815642e9e5375fee66 154 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 131 4.8E-28 T 29-03-2018 IPR023370 TsaA-like domain CHH28_RS07155 f8abf950fc27f5815642e9e5375fee66 154 Gene3D G3DSA:2.40.30.70 5 150 3.9E-39 T 29-03-2018 IPR023370 TsaA-like domain CHH28_RS07155 f8abf950fc27f5815642e9e5375fee66 154 Pfam PF01980 Uncharacterised protein family UPF0066 26 132 2.0E-31 T 29-03-2018 IPR023370 TsaA-like domain CHH28_RS19445 f807a26992e32b9acf88b969735a0c73 552 Gene3D G3DSA:3.40.50.10490 260 513 6.5E-114 T 29-03-2018 CHH28_RS19445 f807a26992e32b9acf88b969735a0c73 552 SUPERFAMILY SSF53697 7 548 4.45E-214 T 29-03-2018 CHH28_RS19445 f807a26992e32b9acf88b969735a0c73 552 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 29-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS19445 f807a26992e32b9acf88b969735a0c73 552 Gene3D G3DSA:3.40.50.10490 144 259 1.4E-43 T 29-03-2018 CHH28_RS19445 f807a26992e32b9acf88b969735a0c73 552 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 29-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS19445 f807a26992e32b9acf88b969735a0c73 552 Pfam PF00342 Phosphoglucose isomerase 52 542 1.3E-193 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS19445 f807a26992e32b9acf88b969735a0c73 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 7.7E-53 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS19445 f807a26992e32b9acf88b969735a0c73 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 7.7E-53 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS19445 f807a26992e32b9acf88b969735a0c73 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 7.7E-53 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS19445 f807a26992e32b9acf88b969735a0c73 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 7.7E-53 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS19445 f807a26992e32b9acf88b969735a0c73 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 7.7E-53 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS19445 f807a26992e32b9acf88b969735a0c73 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 7.7E-53 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS19445 f807a26992e32b9acf88b969735a0c73 552 Gene3D G3DSA:1.10.1390.10 514 552 5.1E-17 T 29-03-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS19445 f807a26992e32b9acf88b969735a0c73 552 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 525 40.044 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS19445 f807a26992e32b9acf88b969735a0c73 552 Gene3D G3DSA:3.40.50.10490 1 143 3.3E-42 T 29-03-2018 CHH28_RS15270 84e4012df78a53abee6f10bbbed14083 303 SUPERFAMILY SSF103481 190 294 1.7E-10 T 29-03-2018 CHH28_RS15270 84e4012df78a53abee6f10bbbed14083 303 Pfam PF00892 EamA-like transporter family 7 142 2.0E-15 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS15270 84e4012df78a53abee6f10bbbed14083 303 Pfam PF00892 EamA-like transporter family 156 288 1.2E-12 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS15270 84e4012df78a53abee6f10bbbed14083 303 SUPERFAMILY SSF103481 46 145 4.05E-7 T 29-03-2018 CHH28_RS03990 98a310ddd02817f4079bb2c8eb942fe6 75 ProSitePatterns PS00605 ATP synthase c subunit signature. 35 56 - T 29-03-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03990 98a310ddd02817f4079bb2c8eb942fe6 75 Gene3D G3DSA:1.20.20.10 1 74 9.2E-16 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CHH28_RS03990 98a310ddd02817f4079bb2c8eb942fe6 75 SUPERFAMILY SSF81333 3 71 2.75E-17 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CHH28_RS03990 98a310ddd02817f4079bb2c8eb942fe6 75 Hamap MF_01396 ATP synthase subunit c [atpH]. 5 70 13.939 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03990 98a310ddd02817f4079bb2c8eb942fe6 75 PRINTS PR00124 ATP synthase C subunit signature 7 26 1.2E-9 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03990 98a310ddd02817f4079bb2c8eb942fe6 75 PRINTS PR00124 ATP synthase C subunit signature 28 43 1.2E-9 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03990 98a310ddd02817f4079bb2c8eb942fe6 75 PRINTS PR00124 ATP synthase C subunit signature 45 70 1.2E-9 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03990 98a310ddd02817f4079bb2c8eb942fe6 75 Pfam PF00137 ATP synthase subunit C 6 69 1.4E-10 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CHH28_RS03990 98a310ddd02817f4079bb2c8eb942fe6 75 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 16 71 1.3E-26 T 29-03-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CHH28_RS05480 03c01110e2329e1248657e0fbbcae96b 145 SMART SM00732 1 98 1.7E-26 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CHH28_RS05480 03c01110e2329e1248657e0fbbcae96b 145 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 133 20.836 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CHH28_RS05480 03c01110e2329e1248657e0fbbcae96b 145 Pfam PF03652 Holliday junction resolvase 1 130 1.3E-37 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CHH28_RS05480 03c01110e2329e1248657e0fbbcae96b 145 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 1 129 1.3E-40 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CHH28_RS05480 03c01110e2329e1248657e0fbbcae96b 145 Gene3D G3DSA:3.30.420.140 1 139 3.4E-37 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CHH28_RS05480 03c01110e2329e1248657e0fbbcae96b 145 SUPERFAMILY SSF53098 1 131 4.25E-38 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS10060 799e154f8c7c306c0251f4babdb4a6af 381 SUPERFAMILY SSF53383 16 355 2.5E-68 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS10060 799e154f8c7c306c0251f4babdb4a6af 381 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 112 310 1.8E-19 T 29-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 CHH28_RS10060 799e154f8c7c306c0251f4babdb4a6af 381 Gene3D G3DSA:3.40.640.10 44 312 7.8E-40 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS02740 9d2e88ab6b6e1071a2c9d00d342954f9 170 Gene3D G3DSA:1.10.357.10 71 170 9.7E-12 T 29-03-2018 CHH28_RS02740 9d2e88ab6b6e1071a2c9d00d342954f9 170 SUPERFAMILY SSF48498 69 149 2.56E-7 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CHH28_RS02740 9d2e88ab6b6e1071a2c9d00d342954f9 170 Gene3D G3DSA:1.10.260.40 38 70 6.8E-5 T 29-03-2018 CHH28_RS02740 9d2e88ab6b6e1071a2c9d00d342954f9 170 SUPERFAMILY SSF46689 6 64 4.67E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS02740 9d2e88ab6b6e1071a2c9d00d342954f9 170 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 66 159 1.1E-5 T 29-03-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 CHH28_RS02740 9d2e88ab6b6e1071a2c9d00d342954f9 170 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 55 2.8E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS02740 9d2e88ab6b6e1071a2c9d00d342954f9 170 Gene3D G3DSA:1.10.10.60 3 37 3.7E-5 T 29-03-2018 CHH28_RS11335 4427a931de34af8da947269f97bb0e13 590 Gene3D G3DSA:1.10.540.10 4 157 7.5E-16 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS11335 4427a931de34af8da947269f97bb0e13 590 SUPERFAMILY SSF47203 281 456 1.93E-34 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS11335 4427a931de34af8da947269f97bb0e13 590 Gene3D G3DSA:2.40.110.10 159 280 3.3E-22 T 29-03-2018 CHH28_RS11335 4427a931de34af8da947269f97bb0e13 590 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 155 1.7E-10 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS11335 4427a931de34af8da947269f97bb0e13 590 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 447 2.6E-17 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS11335 4427a931de34af8da947269f97bb0e13 590 SUPERFAMILY SSF56645 36 280 3.53E-50 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CHH28_RS11335 4427a931de34af8da947269f97bb0e13 590 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 8 33 1.0E-5 T 29-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CHH28_RS11335 4427a931de34af8da947269f97bb0e13 590 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 463 586 5.5E-30 T 29-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CHH28_RS11335 4427a931de34af8da947269f97bb0e13 590 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 268 5.5E-16 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CHH28_RS11335 4427a931de34af8da947269f97bb0e13 590 Gene3D G3DSA:1.20.140.10 281 462 2.6E-34 T 29-03-2018 CHH28_RS08005 d3097e77b8691c3e1ee8b001ffda59ee 609 Gene3D G3DSA:2.170.130.10 54 151 1.0E-10 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS08005 d3097e77b8691c3e1ee8b001ffda59ee 609 Pfam PF00593 TonB dependent receptor 186 583 6.7E-10 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS08005 d3097e77b8691c3e1ee8b001ffda59ee 609 SUPERFAMILY SSF56935 56 579 1.54E-36 T 29-03-2018 CHH28_RS08005 d3097e77b8691c3e1ee8b001ffda59ee 609 Gene3D G3DSA:2.40.170.20 152 609 2.7E-19 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS08005 d3097e77b8691c3e1ee8b001ffda59ee 609 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 140 2.4E-9 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS14960 a891d2a3ed7ebdda404dd8157fe77972 325 Pfam PF12697 Alpha/beta hydrolase family 58 270 1.4E-14 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS14960 a891d2a3ed7ebdda404dd8157fe77972 325 SUPERFAMILY SSF53474 47 313 2.89E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS14960 a891d2a3ed7ebdda404dd8157fe77972 325 Gene3D G3DSA:3.40.50.1820 11 316 3.5E-29 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS01050 e3661543d07594c8ec06ead1c046fa33 170 TIGRFAM TIGR03180 UraD_2: OHCU decarboxylase 6 165 2.2E-53 T 29-03-2018 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 CHH28_RS01050 e3661543d07594c8ec06ead1c046fa33 170 Gene3D G3DSA:1.10.3330.10 1 170 3.5E-47 T 29-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 CHH28_RS01050 e3661543d07594c8ec06ead1c046fa33 170 SUPERFAMILY SSF158694 3 166 1.16E-42 T 29-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 CHH28_RS01050 e3661543d07594c8ec06ead1c046fa33 170 Pfam PF09349 OHCU decarboxylase 7 163 3.2E-39 T 29-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 CHH28_RS02485 5cc8a2062554d6d626a856756364f534 110 SUPERFAMILY SSF101386 3 96 1.55E-23 T 29-03-2018 CHH28_RS02485 5cc8a2062554d6d626a856756364f534 110 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 92 9.4E-29 T 29-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CHH28_RS02485 5cc8a2062554d6d626a856756364f534 110 Gene3D G3DSA:1.10.287.1080 1 98 5.4E-23 T 29-03-2018 CHH28_RS02485 5cc8a2062554d6d626a856756364f534 110 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 8 95 1.8E-13 T 29-03-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 CHH28_RS02485 5cc8a2062554d6d626a856756364f534 110 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 92 20.207 T 29-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CHH28_RS11290 5ee829072c4a17da99ce48c8639bcb3d 266 SMART SM00028 41 74 0.03 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS11290 5ee829072c4a17da99ce48c8639bcb3d 266 SMART SM00028 145 178 18.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS11290 5ee829072c4a17da99ce48c8639bcb3d 266 SMART SM00028 109 142 100.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS11290 5ee829072c4a17da99ce48c8639bcb3d 266 SMART SM00028 75 108 9.1 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS11290 5ee829072c4a17da99ce48c8639bcb3d 266 SUPERFAMILY SSF48452 41 206 1.04E-26 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS11290 5ee829072c4a17da99ce48c8639bcb3d 266 Gene3D G3DSA:1.25.40.10 27 92 1.4E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS11290 5ee829072c4a17da99ce48c8639bcb3d 266 Gene3D G3DSA:1.25.40.10 175 262 3.6E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS11290 5ee829072c4a17da99ce48c8639bcb3d 266 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 13 248 1.2E-46 T 29-03-2018 IPR013360 Pilus biogenesis/stability type IV, PilW CHH28_RS11290 5ee829072c4a17da99ce48c8639bcb3d 266 Pfam PF13432 Tetratricopeptide repeat 48 106 8.8E-4 T 29-03-2018 CHH28_RS11290 5ee829072c4a17da99ce48c8639bcb3d 266 Pfam PF13432 Tetratricopeptide repeat 115 178 3.6E-7 T 29-03-2018 CHH28_RS11290 5ee829072c4a17da99ce48c8639bcb3d 266 Gene3D G3DSA:1.25.40.10 119 174 4.2E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS11290 5ee829072c4a17da99ce48c8639bcb3d 266 Gene3D G3DSA:1.25.40.10 93 118 2.9E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS19740 fc73becb42f3af9a580ce46a15bfd89d 144 SUPERFAMILY SSF69500 1 143 4.58E-54 T 29-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain CHH28_RS19740 fc73becb42f3af9a580ce46a15bfd89d 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 6.1E-53 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CHH28_RS19740 fc73becb42f3af9a580ce46a15bfd89d 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 34.239 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CHH28_RS19740 fc73becb42f3af9a580ce46a15bfd89d 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 1.0E-62 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CHH28_RS19740 fc73becb42f3af9a580ce46a15bfd89d 144 Gene3D G3DSA:3.50.80.10 1 144 1.7E-53 T 29-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain CHH28_RS00035 fc73becb42f3af9a580ce46a15bfd89d 144 SUPERFAMILY SSF69500 1 143 4.58E-54 T 29-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain CHH28_RS00035 fc73becb42f3af9a580ce46a15bfd89d 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 6.1E-53 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CHH28_RS00035 fc73becb42f3af9a580ce46a15bfd89d 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 34.239 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CHH28_RS00035 fc73becb42f3af9a580ce46a15bfd89d 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 1.0E-62 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CHH28_RS00035 fc73becb42f3af9a580ce46a15bfd89d 144 Gene3D G3DSA:3.50.80.10 1 144 1.7E-53 T 29-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain CHH28_RS00390 b46455238cdec769111d38a554fc9cbe 326 Pfam PF13103 TonB C terminal 235 305 3.5E-6 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CHH28_RS00390 b46455238cdec769111d38a554fc9cbe 326 Gene3D G3DSA:3.30.1150.10 222 317 2.9E-11 T 29-03-2018 CHH28_RS00390 b46455238cdec769111d38a554fc9cbe 326 SUPERFAMILY SSF74653 235 315 2.49E-8 T 29-03-2018 CHH28_RS00390 b46455238cdec769111d38a554fc9cbe 326 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 253 310 3.6E-8 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CHH28_RS00765 4ffef6ec1c3cedaf6843b4815168a1e9 255 Gene3D G3DSA:3.40.190.10 161 244 9.8E-4 T 29-03-2018 CHH28_RS00765 4ffef6ec1c3cedaf6843b4815168a1e9 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 236 5.2E-10 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS00765 4ffef6ec1c3cedaf6843b4815168a1e9 255 Gene3D G3DSA:3.40.190.10 24 160 1.4E-11 T 29-03-2018 CHH28_RS00765 4ffef6ec1c3cedaf6843b4815168a1e9 255 SUPERFAMILY SSF53850 41 236 3.36E-20 T 29-03-2018 CHH28_RS10690 3300e6cf2936b3b40a9e8e0ea94098ea 283 Gene3D G3DSA:3.40.630.30 138 223 0.0046 T 29-03-2018 CHH28_RS10690 3300e6cf2936b3b40a9e8e0ea94098ea 283 Pfam PF00583 Acetyltransferase (GNAT) family 42 100 7.3E-6 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS10690 3300e6cf2936b3b40a9e8e0ea94098ea 283 Gene3D G3DSA:3.40.630.30 1 137 4.7E-20 T 29-03-2018 CHH28_RS10690 3300e6cf2936b3b40a9e8e0ea94098ea 283 Gene3D G3DSA:3.40.630.30 224 265 0.032 T 29-03-2018 CHH28_RS10690 3300e6cf2936b3b40a9e8e0ea94098ea 283 SUPERFAMILY SSF55729 5 262 6.34E-43 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS12585 670a6ffbbf8306a5d5bce5dde52eed70 277 SUPERFAMILY SSF74653 173 273 2.62E-20 T 29-03-2018 CHH28_RS12585 670a6ffbbf8306a5d5bce5dde52eed70 277 Pfam PF13103 TonB C terminal 189 260 7.1E-17 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CHH28_RS12585 670a6ffbbf8306a5d5bce5dde52eed70 277 Gene3D G3DSA:3.30.1150.10 171 273 3.4E-27 T 29-03-2018 CHH28_RS12585 670a6ffbbf8306a5d5bce5dde52eed70 277 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 199 271 2.0E-11 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CHH28_RS12585 670a6ffbbf8306a5d5bce5dde52eed70 277 TIGRFAM TIGR02794 tolA_full: protein TolA 53 272 2.1E-20 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CHH28_RS14945 923ab2757560dcb5dcbfb2b1d0b9a9ae 221 SUPERFAMILY SSF48008 76 207 1.18E-26 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CHH28_RS14945 923ab2757560dcb5dcbfb2b1d0b9a9ae 221 SUPERFAMILY SSF46785 3 95 7.74E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS14945 923ab2757560dcb5dcbfb2b1d0b9a9ae 221 SMART SM00345 11 69 2.3E-15 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS14945 923ab2757560dcb5dcbfb2b1d0b9a9ae 221 Gene3D G3DSA:1.10.10.10 1 71 1.1E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS14945 923ab2757560dcb5dcbfb2b1d0b9a9ae 221 SMART SM00895 79 206 2.5E-26 T 29-03-2018 IPR011711 GntR, C-terminal CHH28_RS14945 923ab2757560dcb5dcbfb2b1d0b9a9ae 221 Gene3D G3DSA:1.20.120.530 72 221 5.0E-35 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CHH28_RS14945 923ab2757560dcb5dcbfb2b1d0b9a9ae 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 4.6E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS14945 923ab2757560dcb5dcbfb2b1d0b9a9ae 221 Pfam PF07729 FCD domain 79 205 2.1E-27 T 29-03-2018 IPR011711 GntR, C-terminal CHH28_RS12110 eba0116b8229321e65060083bc118389 343 SUPERFAMILY SSF46689 292 339 3.76E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS12110 eba0116b8229321e65060083bc118389 343 Gene3D G3DSA:1.10.10.60 288 343 7.7E-14 T 29-03-2018 CHH28_RS12110 eba0116b8229321e65060083bc118389 343 Pfam PF12833 Helix-turn-helix domain 262 339 3.6E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS12110 eba0116b8229321e65060083bc118389 343 SMART SM00342 256 338 6.4E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS12110 eba0116b8229321e65060083bc118389 343 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 32 212 1.0E-19 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS12110 eba0116b8229321e65060083bc118389 343 Gene3D G3DSA:1.10.10.60 241 285 0.043 T 29-03-2018 CHH28_RS12110 eba0116b8229321e65060083bc118389 343 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 322 338 5.5E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS12110 eba0116b8229321e65060083bc118389 343 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 307 322 5.5E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS02260 54a3db143effdee45765cb79a6e8b694 248 SUPERFAMILY SSF50475 47 230 4.25E-36 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CHH28_RS02260 54a3db143effdee45765cb79a6e8b694 248 PIRSF PIRSF010372 38 248 3.2E-66 T 29-03-2018 IPR007396 Transcriptional regulator PAI 2-type CHH28_RS02260 54a3db143effdee45765cb79a6e8b694 248 Gene3D G3DSA:2.30.110.10 38 245 2.7E-59 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CHH28_RS02260 54a3db143effdee45765cb79a6e8b694 248 Pfam PF04299 Putative FMN-binding domain 38 204 2.2E-56 T 29-03-2018 IPR007396 Transcriptional regulator PAI 2-type CHH28_RS00165 7b1c30ad74eb582e739e3e5ae8ccf06a 594 Pfam PF13424 Tetratricopeptide repeat 479 545 6.0E-8 T 29-03-2018 CHH28_RS00165 7b1c30ad74eb582e739e3e5ae8ccf06a 594 Gene3D G3DSA:1.25.40.10 293 434 3.4E-16 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS00165 7b1c30ad74eb582e739e3e5ae8ccf06a 594 Gene3D G3DSA:1.25.40.10 186 236 1.1E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS00165 7b1c30ad74eb582e739e3e5ae8ccf06a 594 Gene3D G3DSA:1.25.40.10 503 592 5.1E-21 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS00165 7b1c30ad74eb582e739e3e5ae8ccf06a 594 SUPERFAMILY SSF48452 413 581 3.08E-28 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS00165 7b1c30ad74eb582e739e3e5ae8ccf06a 594 Gene3D G3DSA:1.25.40.10 435 502 3.5E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS00165 7b1c30ad74eb582e739e3e5ae8ccf06a 594 Gene3D G3DSA:1.25.40.10 70 174 5.6E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS00165 7b1c30ad74eb582e739e3e5ae8ccf06a 594 Gene3D G3DSA:1.25.40.10 237 292 3.3E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS00165 7b1c30ad74eb582e739e3e5ae8ccf06a 594 SMART SM00028 241 274 500.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS00165 7b1c30ad74eb582e739e3e5ae8ccf06a 594 SMART SM00028 548 580 290.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS00165 7b1c30ad74eb582e739e3e5ae8ccf06a 594 SMART SM00028 207 240 17.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS00165 7b1c30ad74eb582e739e3e5ae8ccf06a 594 SMART SM00028 514 547 0.18 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS00165 7b1c30ad74eb582e739e3e5ae8ccf06a 594 SMART SM00028 139 172 77.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS00165 7b1c30ad74eb582e739e3e5ae8ccf06a 594 SMART SM00028 411 444 27.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS00165 7b1c30ad74eb582e739e3e5ae8ccf06a 594 SMART SM00028 479 513 0.88 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS00165 7b1c30ad74eb582e739e3e5ae8ccf06a 594 SUPERFAMILY SSF48452 130 303 9.25E-19 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS00165 7b1c30ad74eb582e739e3e5ae8ccf06a 594 Pfam PF13174 Tetratricopeptide repeat 280 307 0.0021 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS00165 7b1c30ad74eb582e739e3e5ae8ccf06a 594 SUPERFAMILY SSF48452 269 368 7.59E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS12080 433736fc1fd70b6f5b970d9b3c62d3eb 355 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 7 344 4.4E-133 T 29-03-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CHH28_RS12080 433736fc1fd70b6f5b970d9b3c62d3eb 355 Gene3D G3DSA:3.40.50.970 2 345 5.3E-79 T 29-03-2018 CHH28_RS12080 433736fc1fd70b6f5b970d9b3c62d3eb 355 SUPERFAMILY SSF52518 28 347 3.22E-93 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CHH28_RS12080 433736fc1fd70b6f5b970d9b3c62d3eb 355 Pfam PF00676 Dehydrogenase E1 component 35 323 2.1E-76 T 29-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 CHH28_RS16025 dfab21553024c5b8d92ed267cf86bd28 184 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 138 144 - T 29-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CHH28_RS16025 dfab21553024c5b8d92ed267cf86bd28 184 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 89 167 4.2E-30 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CHH28_RS16025 dfab21553024c5b8d92ed267cf86bd28 184 Gene3D G3DSA:1.10.10.10 81 170 1.4E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS16025 dfab21553024c5b8d92ed267cf86bd28 184 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 90 168 1.3E-26 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CHH28_RS16025 dfab21553024c5b8d92ed267cf86bd28 184 SUPERFAMILY SSF46767 88 170 7.06E-28 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 SMART SM00958 228 357 3.6E-75 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 SUPERFAMILY SSF81886 884 896 2.62E-84 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 SUPERFAMILY SSF81886 619 839 2.62E-84 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 Gene3D G3DSA:3.40.50.300 416 632 2.1E-56 T 29-03-2018 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 Pfam PF07516 SecA Wing and Scaffold domain 617 828 9.1E-70 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 Gene3D G3DSA:3.40.50.300 9 259 4.1E-57 T 29-03-2018 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 Gene3D G3DSA:3.40.50.300 260 415 6.3E-7 T 29-03-2018 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 SMART SM00957 6 401 6.8E-299 T 29-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 SUPERFAMILY SSF81767 227 367 1.7E-42 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 Pfam PF01043 SecA preprotein cross-linking domain 232 357 4.8E-38 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 Pfam PF02810 SEC-C motif 888 906 9.4E-10 T 29-03-2018 IPR004027 SEC-C motif CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 Gene3D G3DSA:1.10.3060.10 633 732 2.5E-30 T 29-03-2018 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 Gene3D G3DSA:3.10.450.50 733 908 6.8E-53 T 29-03-2018 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 831 20.026 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 SUPERFAMILY SSF52540 416 617 1.77E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 Pfam PF07517 SecA DEAD-like domain 7 401 6.0E-131 T 29-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 PRINTS PR00906 SecA protein signature 101 115 6.4E-70 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 PRINTS PR00906 SecA protein signature 63 87 6.4E-70 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 PRINTS PR00906 SecA protein signature 375 392 6.4E-70 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 PRINTS PR00906 SecA protein signature 412 425 6.4E-70 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 PRINTS PR00906 SecA protein signature 170 190 6.4E-70 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 PRINTS PR00906 SecA protein signature 117 127 6.4E-70 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 PRINTS PR00906 SecA protein signature 338 360 6.4E-70 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 SUPERFAMILY SSF52540 6 228 1.83E-84 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 SUPERFAMILY SSF52540 367 414 1.83E-84 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS00265 eb89a1f07489f7b2b2a26ef40bc8a60a 908 ProSitePatterns PS01312 SecA family signature. 499 514 - T 29-03-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CHH28_RS18380 757c1ae1e62b045d5134d26ac6611d70 181 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CHH28_RS18380 757c1ae1e62b045d5134d26ac6611d70 181 SUPERFAMILY SSF55811 6 179 2.44E-36 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CHH28_RS18380 757c1ae1e62b045d5134d26ac6611d70 181 Pfam PF00293 NUDIX domain 45 146 1.9E-14 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CHH28_RS18380 757c1ae1e62b045d5134d26ac6611d70 181 Gene3D G3DSA:3.90.79.10 4 178 5.6E-31 T 29-03-2018 CHH28_RS15070 771e87d11ae3db842e7f180c307ee4f1 267 Pfam PF00290 Tryptophan synthase alpha chain 9 264 5.2E-92 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CHH28_RS15070 771e87d11ae3db842e7f180c307ee4f1 267 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 264 35.378 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CHH28_RS15070 771e87d11ae3db842e7f180c307ee4f1 267 SUPERFAMILY SSF51366 1 263 2.73E-93 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CHH28_RS15070 771e87d11ae3db842e7f180c307ee4f1 267 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 10 261 8.0E-76 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CHH28_RS15070 771e87d11ae3db842e7f180c307ee4f1 267 Gene3D G3DSA:3.20.20.70 2 267 5.2E-84 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS15070 771e87d11ae3db842e7f180c307ee4f1 267 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 29-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CHH28_RS08705 041978365619975358e962d982345912 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 5 251 5.2E-63 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CHH28_RS08705 041978365619975358e962d982345912 252 SUPERFAMILY SSF102705 1 251 6.15E-80 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CHH28_RS08705 041978365619975358e962d982345912 252 Gene3D G3DSA:3.40.1390.30 111 223 4.8E-31 T 29-03-2018 CHH28_RS08705 041978365619975358e962d982345912 252 Gene3D G3DSA:3.40.1390.30 1 110 2.6E-27 T 29-03-2018 CHH28_RS08705 041978365619975358e962d982345912 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 240 2.8E-57 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CHH28_RS17830 23b8a8c193cc5628b8971298d9187cd7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS17830 23b8a8c193cc5628b8971298d9187cd7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS17830 23b8a8c193cc5628b8971298d9187cd7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS17830 23b8a8c193cc5628b8971298d9187cd7 301 SUPERFAMILY SSF46785 4 86 4.57E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17830 23b8a8c193cc5628b8971298d9187cd7 301 SUPERFAMILY SSF53850 90 298 1.99E-47 T 29-03-2018 CHH28_RS17830 23b8a8c193cc5628b8971298d9187cd7 301 Pfam PF03466 LysR substrate binding domain 90 294 5.6E-48 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS17830 23b8a8c193cc5628b8971298d9187cd7 301 Gene3D G3DSA:3.40.190.10 174 263 1.9E-24 T 29-03-2018 CHH28_RS17830 23b8a8c193cc5628b8971298d9187cd7 301 Gene3D G3DSA:1.10.10.10 2 84 9.4E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17830 23b8a8c193cc5628b8971298d9187cd7 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 8.7E-23 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS17830 23b8a8c193cc5628b8971298d9187cd7 301 Gene3D G3DSA:3.40.190.10 89 173 9.7E-14 T 29-03-2018 CHH28_RS12340 477c4c81c36c44716384b7807d2662a5 510 Gene3D G3DSA:3.90.1300.10 12 510 6.5E-128 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CHH28_RS12340 477c4c81c36c44716384b7807d2662a5 510 Pfam PF01425 Amidase 37 485 2.3E-96 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CHH28_RS12340 477c4c81c36c44716384b7807d2662a5 510 ProSitePatterns PS00571 Amidases signature. 159 190 - T 29-03-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 CHH28_RS12340 477c4c81c36c44716384b7807d2662a5 510 SUPERFAMILY SSF75304 438 494 1.44E-123 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CHH28_RS12340 477c4c81c36c44716384b7807d2662a5 510 SUPERFAMILY SSF75304 14 408 1.44E-123 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CHH28_RS11160 45b3cd200e5525f9ffc7cf49318e589d 244 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 9 242 1.5E-96 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CHH28_RS11160 45b3cd200e5525f9ffc7cf49318e589d 244 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 244 123.049 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CHH28_RS11160 45b3cd200e5525f9ffc7cf49318e589d 244 SUPERFAMILY SSF63892 7 242 1.57E-97 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CHH28_RS11160 45b3cd200e5525f9ffc7cf49318e589d 244 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 9 240 1.2E-100 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CHH28_RS11160 45b3cd200e5525f9ffc7cf49318e589d 244 Gene3D G3DSA:3.20.20.70 7 241 4.3E-102 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS02660 f7e959e4b2532b34cedad9cfcb1dc45e 132 Pfam PF13586 Transposase DDE domain 44 130 2.5E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS02660 f7e959e4b2532b34cedad9cfcb1dc45e 132 Gene3D G3DSA:3.90.350.10 1 118 1.5E-4 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS04995 3aea8004127f56bfb653fbeca98d32a4 880 Pfam PF00082 Subtilase family 353 644 1.5E-48 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS04995 3aea8004127f56bfb653fbeca98d32a4 880 Gene3D G3DSA:3.40.50.200 291 658 9.7E-89 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS04995 3aea8004127f56bfb653fbeca98d32a4 880 Gene3D G3DSA:2.60.40.10 663 757 6.1E-5 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS04995 3aea8004127f56bfb653fbeca98d32a4 880 Gene3D G3DSA:2.60.120.380 83 218 2.1E-9 T 29-03-2018 CHH28_RS04995 3aea8004127f56bfb653fbeca98d32a4 880 PIRSF PIRSF037893 7 41 5.0 T 29-03-2018 IPR017309 Peptidase S8A, subtilisin-related, proteobacteria CHH28_RS04995 3aea8004127f56bfb653fbeca98d32a4 880 PIRSF PIRSF037893 57 875 4.2E-226 T 29-03-2018 IPR017309 Peptidase S8A, subtilisin-related, proteobacteria CHH28_RS04995 3aea8004127f56bfb653fbeca98d32a4 880 SUPERFAMILY SSF117074 761 810 9.29E-5 T 29-03-2018 CHH28_RS04995 3aea8004127f56bfb653fbeca98d32a4 880 SUPERFAMILY SSF52743 328 655 6.28E-80 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS04995 3aea8004127f56bfb653fbeca98d32a4 880 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 355 366 - T 29-03-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site CHH28_RS04995 3aea8004127f56bfb653fbeca98d32a4 880 PRINTS PR00723 Subtilisin serine protease family (S8) signature 350 369 2.4E-16 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CHH28_RS04995 3aea8004127f56bfb653fbeca98d32a4 880 PRINTS PR00723 Subtilisin serine protease family (S8) signature 407 420 2.4E-16 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CHH28_RS04995 3aea8004127f56bfb653fbeca98d32a4 880 PRINTS PR00723 Subtilisin serine protease family (S8) signature 591 607 2.4E-16 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CHH28_RS04995 3aea8004127f56bfb653fbeca98d32a4 880 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 592 602 - T 29-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site CHH28_RS04995 3aea8004127f56bfb653fbeca98d32a4 880 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 411 421 - T 29-03-2018 IPR022398 Peptidase S8, subtilisin, His-active site CHH28_RS15720 35d27fb5aa0d821210d450da4bb5a5ae 312 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 8 284 8.9E-27 T 29-03-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CHH28_RS07850 814d8801076658cabe9afc8fafee42e0 235 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 21 216 2.5E-34 T 29-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CHH28_RS07850 814d8801076658cabe9afc8fafee42e0 235 Gene3D G3DSA:3.40.50.1000 83 235 3.6E-15 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS07850 814d8801076658cabe9afc8fafee42e0 235 Pfam PF12710 haloacid dehalogenase-like hydrolase 21 204 8.7E-27 T 29-03-2018 CHH28_RS07850 814d8801076658cabe9afc8fafee42e0 235 SUPERFAMILY SSF56784 16 222 2.07E-25 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS07850 814d8801076658cabe9afc8fafee42e0 235 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 20 206 7.6E-19 T 29-03-2018 CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 SUPERFAMILY SSF109736 153 217 1.11E-20 T 29-03-2018 CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 Pfam PF02769 AIR synthase related protein, C-terminal domain 425 582 1.6E-26 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 Pfam PF02769 AIR synthase related protein, C-terminal domain 848 966 7.9E-14 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 SUPERFAMILY SSF52317 1043 1297 1.77E-96 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 SUPERFAMILY SSF55326 614 813 2.62E-64 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 Gene3D G3DSA:3.90.650.10 817 996 1.4E-27 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 Gene3D G3DSA:3.90.650.10 419 601 7.9E-29 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 Gene3D G3DSA:3.40.50.880 1043 1299 6.6E-31 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 SUPERFAMILY SSF56042 823 1030 3.29E-47 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 Gene3D G3DSA:3.30.1330.10 606 810 3.6E-18 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 Gene3D G3DSA:3.30.1330.10 181 214 0.0082 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 Gene3D G3DSA:3.30.1330.10 215 418 1.3E-48 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 SUPERFAMILY SSF56042 424 648 1.79E-52 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1296 0.0 T 29-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1045 1297 7.0E-108 T 29-03-2018 CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 SMART SM01211 1044 1297 1.0E-157 T 29-03-2018 CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 SUPERFAMILY SSF55326 218 421 3.24E-64 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 SUPERFAMILY SSF82697 1 149 3.77E-47 T 29-03-2018 CHH28_RS10005 8db7cf79b540b40abaabf7249cc66cf6 1300 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1298 21.069 T 29-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CHH28_RS06985 d64d81f3e31bac4f8b107ec26b478120 573 Gene3D G3DSA:3.20.20.190 209 494 2.7E-15 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CHH28_RS06985 d64d81f3e31bac4f8b107ec26b478120 573 SUPERFAMILY SSF51695 213 382 4.88E-19 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CHH28_RS06985 d64d81f3e31bac4f8b107ec26b478120 573 SUPERFAMILY SSF49695 24 101 4.72E-11 T 29-03-2018 IPR011024 Gamma-crystallin-related CHH28_RS06985 d64d81f3e31bac4f8b107ec26b478120 573 Gene3D G3DSA:2.60.20.10 108 202 4.3E-9 T 29-03-2018 CHH28_RS06985 d64d81f3e31bac4f8b107ec26b478120 573 Pfam PF08964 Beta/Gamma crystallin 23 101 8.2E-7 T 29-03-2018 IPR015059 Calcium-dependent cell adhesion molecule, N-terminal GO:0016020|GO:0016337 CHH28_RS06985 d64d81f3e31bac4f8b107ec26b478120 573 SUPERFAMILY SSF49695 102 198 2.23E-7 T 29-03-2018 IPR011024 Gamma-crystallin-related CHH28_RS06985 d64d81f3e31bac4f8b107ec26b478120 573 Gene3D G3DSA:2.60.20.10 13 107 2.4E-13 T 29-03-2018 CHH28_RS15130 10f76459c1b14ad4040a396d68cedf72 626 Gene3D G3DSA:3.40.50.980 50 241 2.2E-41 T 29-03-2018 CHH28_RS15130 10f76459c1b14ad4040a396d68cedf72 626 Gene3D G3DSA:3.40.50.980 242 402 4.9E-38 T 29-03-2018 CHH28_RS15130 10f76459c1b14ad4040a396d68cedf72 626 Pfam PF13193 AMP-binding enzyme C-terminal domain 509 588 6.6E-20 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CHH28_RS15130 10f76459c1b14ad4040a396d68cedf72 626 Gene3D G3DSA:3.30.300.30 494 607 5.1E-23 T 29-03-2018 CHH28_RS15130 10f76459c1b14ad4040a396d68cedf72 626 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 3 56 2.5E-15 T 29-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CHH28_RS15130 10f76459c1b14ad4040a396d68cedf72 626 SUPERFAMILY SSF56801 3 622 1.57E-153 T 29-03-2018 CHH28_RS15130 10f76459c1b14ad4040a396d68cedf72 626 Gene3D G3DSA:2.30.38.10 403 493 3.6E-14 T 29-03-2018 CHH28_RS15130 10f76459c1b14ad4040a396d68cedf72 626 Pfam PF00501 AMP-binding enzyme 64 500 1.8E-83 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CHH28_RS15130 10f76459c1b14ad4040a396d68cedf72 626 ProSitePatterns PS00455 Putative AMP-binding domain signature. 236 247 - T 29-03-2018 IPR020845 AMP-binding, conserved site CHH28_RS06665 d0b53696369b8f31a7e15fedbd807504 479 Gene3D G3DSA:3.40.50.20 9 130 7.8E-49 T 29-03-2018 CHH28_RS06665 d0b53696369b8f31a7e15fedbd807504 479 Pfam PF00289 Biotin carboxylase, N-terminal domain 10 117 9.7E-43 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CHH28_RS06665 d0b53696369b8f31a7e15fedbd807504 479 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 292 299 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CHH28_RS06665 d0b53696369b8f31a7e15fedbd807504 479 Pfam PF02785 Biotin carboxylase C-terminal domain 342 447 1.4E-38 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CHH28_RS06665 d0b53696369b8f31a7e15fedbd807504 479 Gene3D G3DSA:3.30.470.20 217 451 5.0E-97 T 29-03-2018 CHH28_RS06665 d0b53696369b8f31a7e15fedbd807504 479 SMART SM00878 342 448 8.4E-58 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CHH28_RS06665 d0b53696369b8f31a7e15fedbd807504 479 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 160 174 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CHH28_RS06665 d0b53696369b8f31a7e15fedbd807504 479 SUPERFAMILY SSF56059 90 354 8.13E-69 T 29-03-2018 CHH28_RS06665 d0b53696369b8f31a7e15fedbd807504 479 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 10 450 6.2E-190 T 29-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CHH28_RS06665 d0b53696369b8f31a7e15fedbd807504 479 Gene3D G3DSA:3.30.1490.20 131 216 1.1E-21 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CHH28_RS06665 d0b53696369b8f31a7e15fedbd807504 479 SUPERFAMILY SSF51246 337 454 1.26E-41 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CHH28_RS06665 d0b53696369b8f31a7e15fedbd807504 479 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 122 328 6.8E-74 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CHH28_RS06665 d0b53696369b8f31a7e15fedbd807504 479 SUPERFAMILY SSF52440 8 120 5.54E-44 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CHH28_RS04005 e68cec7049cbc6cb1a831fd3d774b4b9 305 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 48 225 2.4E-57 T 29-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CHH28_RS04005 e68cec7049cbc6cb1a831fd3d774b4b9 305 Gene3D G3DSA:1.10.10.730 143 190 3.0E-18 T 29-03-2018 CHH28_RS04005 e68cec7049cbc6cb1a831fd3d774b4b9 305 Pfam PF02195 ParB-like nuclease domain 52 142 2.0E-26 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CHH28_RS04005 e68cec7049cbc6cb1a831fd3d774b4b9 305 SUPERFAMILY SSF110849 50 144 1.15E-27 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CHH28_RS04005 e68cec7049cbc6cb1a831fd3d774b4b9 305 Gene3D G3DSA:3.90.1530.10 37 142 2.2E-35 T 29-03-2018 CHH28_RS04005 e68cec7049cbc6cb1a831fd3d774b4b9 305 SUPERFAMILY SSF109709 134 244 3.92E-33 T 29-03-2018 CHH28_RS04005 e68cec7049cbc6cb1a831fd3d774b4b9 305 SMART SM00470 50 142 5.0E-35 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CHH28_RS12475 c19c4826bbe84fc9edce4827f8eeff1a 383 Gene3D G3DSA:3.40.1090.10 1 282 3.4E-39 T 29-03-2018 CHH28_RS12475 c19c4826bbe84fc9edce4827f8eeff1a 383 SUPERFAMILY SSF52151 2 290 3.66E-50 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CHH28_RS12475 c19c4826bbe84fc9edce4827f8eeff1a 383 Pfam PF01734 Patatin-like phospholipase 6 218 1.2E-22 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CHH28_RS18875 cb289ae845e3857e8ef03de422b73d15 227 Pfam PF03167 Uracil DNA glycosylase superfamily 59 214 5.4E-24 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CHH28_RS18875 cb289ae845e3857e8ef03de422b73d15 227 SMART SM00986 55 215 1.3E-41 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CHH28_RS18875 cb289ae845e3857e8ef03de422b73d15 227 SMART SM00987 55 215 1.3E-41 T 29-03-2018 CHH28_RS18875 cb289ae845e3857e8ef03de422b73d15 227 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 11 219 1.8E-82 T 29-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CHH28_RS18875 cb289ae845e3857e8ef03de422b73d15 227 Gene3D G3DSA:3.40.470.10 1 227 2.1E-104 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CHH28_RS18875 cb289ae845e3857e8ef03de422b73d15 227 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 63 72 - T 29-03-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CHH28_RS18875 cb289ae845e3857e8ef03de422b73d15 227 SUPERFAMILY SSF52141 9 226 2.03E-93 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CHH28_RS18875 cb289ae845e3857e8ef03de422b73d15 227 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 10 226 41.045 T 29-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CHH28_RS04465 a9843810b7e2210265eafa6c4ca781fa 420 Gene3D G3DSA:3.40.190.10 1 413 3.8E-8 T 29-03-2018 CHH28_RS07860 e98727efad7bd0aedc35375bf72dbf9c 194 SUPERFAMILY SSF52317 1 192 9.83E-58 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS07860 e98727efad7bd0aedc35375bf72dbf9c 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.1E-14 T 29-03-2018 CHH28_RS07860 e98727efad7bd0aedc35375bf72dbf9c 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 7.1E-14 T 29-03-2018 CHH28_RS07860 e98727efad7bd0aedc35375bf72dbf9c 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.1E-14 T 29-03-2018 CHH28_RS07860 e98727efad7bd0aedc35375bf72dbf9c 194 Gene3D G3DSA:3.40.50.880 1 194 5.9E-62 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS07860 e98727efad7bd0aedc35375bf72dbf9c 194 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.0E-36 T 29-03-2018 CHH28_RS07860 e98727efad7bd0aedc35375bf72dbf9c 194 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.0E-36 T 29-03-2018 CHH28_RS07860 e98727efad7bd0aedc35375bf72dbf9c 194 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.0E-36 T 29-03-2018 CHH28_RS07860 e98727efad7bd0aedc35375bf72dbf9c 194 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.0E-36 T 29-03-2018 CHH28_RS07860 e98727efad7bd0aedc35375bf72dbf9c 194 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.0E-36 T 29-03-2018 CHH28_RS07860 e98727efad7bd0aedc35375bf72dbf9c 194 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.0E-36 T 29-03-2018 CHH28_RS07860 e98727efad7bd0aedc35375bf72dbf9c 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 7.1E-6 T 29-03-2018 CHH28_RS07860 e98727efad7bd0aedc35375bf72dbf9c 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 7.1E-6 T 29-03-2018 CHH28_RS07860 e98727efad7bd0aedc35375bf72dbf9c 194 Pfam PF00117 Glutamine amidotransferase class-I 4 190 1.0E-57 T 29-03-2018 IPR017926 Glutamine amidotransferase CHH28_RS07860 e98727efad7bd0aedc35375bf72dbf9c 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 1.1E-87 T 29-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CHH28_RS15025 40b4ae144f29d6d95dd39686e1efccee 257 Pfam PF01925 Sulfite exporter TauE/SafE 7 253 4.9E-47 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CHH28_RS04550 33ed04534fbf80fec6a4f408b647506c 1035 Gene3D G3DSA:1.25.40.10 444 506 0.017 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS04550 33ed04534fbf80fec6a4f408b647506c 1035 Gene3D G3DSA:1.25.40.10 507 551 0.073 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS04550 33ed04534fbf80fec6a4f408b647506c 1035 SUPERFAMILY SSF48452 476 617 1.07E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS04550 33ed04534fbf80fec6a4f408b647506c 1035 Gene3D G3DSA:1.25.40.10 552 722 7.5E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS04550 33ed04534fbf80fec6a4f408b647506c 1035 SUPERFAMILY SSF48452 470 518 4.17E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS04550 33ed04534fbf80fec6a4f408b647506c 1035 SUPERFAMILY SSF48452 215 344 4.17E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS04550 33ed04534fbf80fec6a4f408b647506c 1035 Gene3D G3DSA:1.25.40.10 274 366 0.029 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS04550 33ed04534fbf80fec6a4f408b647506c 1035 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 696 1018 2.7E-42 T 29-03-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 CHH28_RS04550 33ed04534fbf80fec6a4f408b647506c 1035 Gene3D G3DSA:1.25.40.10 106 270 3.8E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS14210 6a035b5fc1551093b82f400bcf4a5849 341 SUPERFAMILY SSF143631 26 333 3.14E-97 T 29-03-2018 IPR003374 ApbE-like domain CHH28_RS14210 6a035b5fc1551093b82f400bcf4a5849 341 Pfam PF02424 ApbE family 33 312 9.9E-84 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CHH28_RS14210 6a035b5fc1551093b82f400bcf4a5849 341 PIRSF PIRSF006268 1 335 3.9E-89 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CHH28_RS14210 6a035b5fc1551093b82f400bcf4a5849 341 Gene3D G3DSA:3.10.520.10 31 327 1.0E-53 T 29-03-2018 CHH28_RS12690 cd55a67377d64e7a4509f324bbd72eac 484 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 138 151 6.8E-47 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CHH28_RS12690 cd55a67377d64e7a4509f324bbd72eac 484 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 214 231 6.8E-47 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CHH28_RS12690 cd55a67377d64e7a4509f324bbd72eac 484 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 323 349 6.8E-47 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CHH28_RS12690 cd55a67377d64e7a4509f324bbd72eac 484 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 162 190 6.8E-47 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CHH28_RS12690 cd55a67377d64e7a4509f324bbd72eac 484 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 232 248 6.8E-47 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CHH28_RS12690 cd55a67377d64e7a4509f324bbd72eac 484 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 182 1.4E-51 T 29-03-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CHH28_RS12690 cd55a67377d64e7a4509f324bbd72eac 484 SUPERFAMILY SSF51735 3 185 2.17E-48 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS12690 cd55a67377d64e7a4509f324bbd72eac 484 Gene3D G3DSA:3.30.360.10 184 483 7.1E-128 T 29-03-2018 CHH28_RS12690 cd55a67377d64e7a4509f324bbd72eac 484 Gene3D G3DSA:3.40.50.720 4 183 1.3E-56 T 29-03-2018 CHH28_RS12690 cd55a67377d64e7a4509f324bbd72eac 484 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 172 178 - T 29-03-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CHH28_RS12690 cd55a67377d64e7a4509f324bbd72eac 484 SUPERFAMILY SSF55347 177 480 2.81E-114 T 29-03-2018 CHH28_RS12690 cd55a67377d64e7a4509f324bbd72eac 484 PIRSF PIRSF000110 1 484 3.8E-168 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CHH28_RS12690 cd55a67377d64e7a4509f324bbd72eac 484 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 184 480 2.0E-117 T 29-03-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CHH28_RS12690 cd55a67377d64e7a4509f324bbd72eac 484 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 482 79.855 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CHH28_RS12690 cd55a67377d64e7a4509f324bbd72eac 484 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 7 482 4.7E-172 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CHH28_RS09505 b78914ab08712a1f72b516b1f84ee23a 79 Gene3D G3DSA:1.10.287.40 1 63 3.3E-4 T 29-03-2018 CHH28_RS09505 b78914ab08712a1f72b516b1f84ee23a 79 Pfam PF04325 Protein of unknown function (DUF465) 29 76 2.8E-14 T 29-03-2018 IPR007420 Protein of unknown function DUF465 CHH28_RS00440 e6cb4250995fa2d54632893a3cb309f5 319 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 315 18.521 T 29-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS00440 e6cb4250995fa2d54632893a3cb309f5 319 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 187 4.6E-52 T 29-03-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CHH28_RS00440 e6cb4250995fa2d54632893a3cb309f5 319 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 258 315 3.0E-9 T 29-03-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS00440 e6cb4250995fa2d54632893a3cb309f5 319 Gene3D G3DSA:2.30.130.10 256 319 3.0E-10 T 29-03-2018 IPR002478 PUA domain GO:0003723 CHH28_RS00440 e6cb4250995fa2d54632893a3cb309f5 319 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 188 253 3.5E-19 T 29-03-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 CHH28_RS00440 e6cb4250995fa2d54632893a3cb309f5 319 Gene3D G3DSA:3.30.2350.10 9 235 1.2E-77 T 29-03-2018 CHH28_RS00440 e6cb4250995fa2d54632893a3cb309f5 319 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 226 5.5E-74 T 29-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS00440 e6cb4250995fa2d54632893a3cb309f5 319 SUPERFAMILY SSF55120 10 253 7.91E-75 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS14160 6742ad62fadf24d75c1478503135b81c 432 Gene3D G3DSA:3.40.190.10 195 429 1.6E-9 T 29-03-2018 CHH28_RS14160 6742ad62fadf24d75c1478503135b81c 432 Pfam PF05494 MlaC protein 35 195 4.2E-43 T 29-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CHH28_RS14160 6742ad62fadf24d75c1478503135b81c 432 Gene3D G3DSA:3.10.450.50 71 169 8.8E-23 T 29-03-2018 CHH28_RS14160 6742ad62fadf24d75c1478503135b81c 432 SUPERFAMILY SSF53850 201 423 2.48E-18 T 29-03-2018 CHH28_RS09075 e67dd5a0a55366e05d0f398fc5186f0e 188 Gene3D G3DSA:1.10.150.120 74 187 1.6E-33 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CHH28_RS09075 e67dd5a0a55366e05d0f398fc5186f0e 188 SUPERFAMILY SSF47741 83 167 3.79E-33 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CHH28_RS09075 e67dd5a0a55366e05d0f398fc5186f0e 188 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 62 1.9E-7 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CHH28_RS09075 e67dd5a0a55366e05d0f398fc5186f0e 188 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CHH28_RS09075 e67dd5a0a55366e05d0f398fc5186f0e 188 Pfam PF01799 [2Fe-2S] binding domain 72 144 8.4E-29 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CHH28_RS09075 e67dd5a0a55366e05d0f398fc5186f0e 188 Gene3D G3DSA:3.10.20.30 1 73 7.8E-26 T 29-03-2018 IPR012675 Beta-grasp domain CHH28_RS09075 e67dd5a0a55366e05d0f398fc5186f0e 188 SUPERFAMILY SSF54292 2 76 3.54E-25 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CHH28_RS00520 fbf6098f6cf37454c1cc5b8acf4811b4 158 SUPERFAMILY SSF46557 3 78 1.44E-29 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CHH28_RS00520 fbf6098f6cf37454c1cc5b8acf4811b4 158 PIRSF PIRSF006092 1 157 6.7E-51 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CHH28_RS00520 fbf6098f6cf37454c1cc5b8acf4811b4 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 2.2E-32 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CHH28_RS00520 fbf6098f6cf37454c1cc5b8acf4811b4 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CHH28_RS00520 fbf6098f6cf37454c1cc5b8acf4811b4 158 Gene3D G3DSA:1.10.287.180 3 76 6.9E-34 T 29-03-2018 CHH28_RS00520 fbf6098f6cf37454c1cc5b8acf4811b4 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CHH28_RS00520 fbf6098f6cf37454c1cc5b8acf4811b4 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 34.069 T 29-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CHH28_RS00520 fbf6098f6cf37454c1cc5b8acf4811b4 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 156 1.8E-27 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CHH28_RS00520 fbf6098f6cf37454c1cc5b8acf4811b4 158 SUPERFAMILY SSF54534 82 156 3.27E-23 T 29-03-2018 CHH28_RS00520 fbf6098f6cf37454c1cc5b8acf4811b4 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 1.9E-59 T 29-03-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CHH28_RS00520 fbf6098f6cf37454c1cc5b8acf4811b4 158 Gene3D G3DSA:3.10.50.30 77 158 2.4E-26 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CHH28_RS19605 61556c76216678d196fc4cba6ebd8775 234 Gene3D G3DSA:1.10.10.60 167 228 3.8E-9 T 29-03-2018 CHH28_RS19605 61556c76216678d196fc4cba6ebd8775 234 Gene3D G3DSA:3.30.450.40 20 166 7.9E-9 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS19605 61556c76216678d196fc4cba6ebd8775 234 Pfam PF02954 Bacterial regulatory protein, Fis family 195 227 1.3E-11 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS19605 61556c76216678d196fc4cba6ebd8775 234 SUPERFAMILY SSF46689 175 227 8.51E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS19605 61556c76216678d196fc4cba6ebd8775 234 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 210 230 2.0E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS19605 61556c76216678d196fc4cba6ebd8775 234 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 193 210 2.0E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS19605 61556c76216678d196fc4cba6ebd8775 234 SUPERFAMILY SSF55781 39 166 1.28E-7 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS03955 1139139133dc45a3d9344518e73b3a49 2504 Gene3D G3DSA:2.60.40.10 1270 1364 0.012 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS03955 1139139133dc45a3d9344518e73b3a49 2504 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 1636 1768 6.1E-14 T 29-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CHH28_RS03955 1139139133dc45a3d9344518e73b3a49 2504 Pfam PF13205 Bacterial Ig-like domain 722 796 8.9E-7 T 29-03-2018 IPR032812 SbsA, Ig-like domain CHH28_RS03955 1139139133dc45a3d9344518e73b3a49 2504 SMART SM01360 1836 1925 2.1E-24 T 29-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 CHH28_RS03955 1139139133dc45a3d9344518e73b3a49 2504 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 1168 1260 2.5E-17 T 29-03-2018 CHH28_RS03955 1139139133dc45a3d9344518e73b3a49 2504 Gene3D G3DSA:1.50.10.20 2028 2301 6.6E-36 T 29-03-2018 CHH28_RS03955 1139139133dc45a3d9344518e73b3a49 2504 Pfam PF01835 MG2 domain 1272 1364 4.2E-17 T 29-03-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 CHH28_RS03955 1139139133dc45a3d9344518e73b3a49 2504 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 2037 2060 3.0E-7 T 29-03-2018 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming CHH28_RS03955 1139139133dc45a3d9344518e73b3a49 2504 SMART SM01359 1625 1768 9.9E-25 T 29-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CHH28_RS03955 1139139133dc45a3d9344518e73b3a49 2504 Pfam PF00207 Alpha-2-macroglobulin family 1837 1924 9.0E-13 T 29-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 CHH28_RS03955 1139139133dc45a3d9344518e73b3a49 2504 Gene3D G3DSA:2.60.40.10 1888 1987 1.5E-9 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS03955 1139139133dc45a3d9344518e73b3a49 2504 SUPERFAMILY SSF48239 2035 2296 5.89E-38 T 29-03-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CHH28_RS03955 1139139133dc45a3d9344518e73b3a49 2504 Gene3D G3DSA:2.60.40.1120 1175 1267 0.022 T 29-03-2018 CHH28_RS13135 2f430e5515b3972d12e46e22e9a5c752 112 SUPERFAMILY SSF47729 14 110 1.15E-11 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CHH28_RS13135 2f430e5515b3972d12e46e22e9a5c752 112 Gene3D G3DSA:4.10.520.10 5 112 4.4E-19 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CHH28_RS13135 2f430e5515b3972d12e46e22e9a5c752 112 SMART SM00411 13 112 1.9E-6 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS13135 2f430e5515b3972d12e46e22e9a5c752 112 Pfam PF00216 Bacterial DNA-binding protein 14 110 1.3E-14 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS17760 9538d0c57b7495bfbf0429c3953de4ce 89 SUPERFAMILY SSF118001 12 78 3.4E-23 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CHH28_RS17760 9538d0c57b7495bfbf0429c3953de4ce 89 Gene3D G3DSA:1.10.10.610 12 82 1.8E-24 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CHH28_RS17760 9538d0c57b7495bfbf0429c3953de4ce 89 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 12 73 1.0E-11 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CHH28_RS17760 9538d0c57b7495bfbf0429c3953de4ce 89 Pfam PF06794 Uncharacterised protein family (UPF0270) 14 77 6.6E-24 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CHH28_RS01570 2fa90b6b87dbbe10dcf4e893ee688d2a 922 SUPERFAMILY SSF56935 308 356 8.55E-89 T 29-03-2018 CHH28_RS01570 2fa90b6b87dbbe10dcf4e893ee688d2a 922 SUPERFAMILY SSF56935 38 232 8.55E-89 T 29-03-2018 CHH28_RS01570 2fa90b6b87dbbe10dcf4e893ee688d2a 922 SUPERFAMILY SSF56935 393 453 8.55E-89 T 29-03-2018 CHH28_RS01570 2fa90b6b87dbbe10dcf4e893ee688d2a 922 SUPERFAMILY SSF56935 480 922 8.55E-89 T 29-03-2018 CHH28_RS01570 2fa90b6b87dbbe10dcf4e893ee688d2a 922 Pfam PF00593 TonB dependent receptor 386 921 4.5E-33 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS01570 2fa90b6b87dbbe10dcf4e893ee688d2a 922 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 164 2.9E-24 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS01570 2fa90b6b87dbbe10dcf4e893ee688d2a 922 Gene3D G3DSA:2.170.130.10 28 166 3.4E-31 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS01570 2fa90b6b87dbbe10dcf4e893ee688d2a 922 Gene3D G3DSA:2.40.170.20 167 922 1.7E-53 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS13535 2d7e7fbeb2f3530a00f2c881fafdbcfa 373 Pfam PF00487 Fatty acid desaturase 113 327 1.8E-28 T 29-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CHH28_RS05555 3e5a9c8305ba40d22e1dd024b51f24be 303 Pfam PF13704 Glycosyl transferase family 2 10 104 5.5E-16 T 29-03-2018 CHH28_RS05555 3e5a9c8305ba40d22e1dd024b51f24be 303 SUPERFAMILY SSF53448 7 121 8.89E-8 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS05555 3e5a9c8305ba40d22e1dd024b51f24be 303 Gene3D G3DSA:3.90.550.10 2 218 4.7E-6 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS13450 9fd565b9a03028b13c68527a40ecc890 581 SUPERFAMILY SSF52172 463 577 4.55E-13 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS13450 9fd565b9a03028b13c68527a40ecc890 581 Gene3D G3DSA:1.10.287.130 214 281 3.6E-7 T 29-03-2018 CHH28_RS13450 9fd565b9a03028b13c68527a40ecc890 581 Gene3D G3DSA:3.30.565.10 289 449 2.4E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13450 9fd565b9a03028b13c68527a40ecc890 581 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 4.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13450 9fd565b9a03028b13c68527a40ecc890 581 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 4.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13450 9fd565b9a03028b13c68527a40ecc890 581 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 393 4.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13450 9fd565b9a03028b13c68527a40ecc890 581 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 4.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13450 9fd565b9a03028b13c68527a40ecc890 581 SMART SM00388 224 286 4.3E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS13450 9fd565b9a03028b13c68527a40ecc890 581 SUPERFAMILY SSF55874 286 440 4.58E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13450 9fd565b9a03028b13c68527a40ecc890 581 Gene3D G3DSA:3.40.50.2300 455 580 5.4E-11 T 29-03-2018 CHH28_RS13450 9fd565b9a03028b13c68527a40ecc890 581 SMART SM00387 329 440 4.7E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13450 9fd565b9a03028b13c68527a40ecc890 581 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 439 4.7E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13450 9fd565b9a03028b13c68527a40ecc890 581 SUPERFAMILY SSF47384 208 286 8.83E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS13450 9fd565b9a03028b13c68527a40ecc890 581 Pfam PF00072 Response regulator receiver domain 464 572 3.1E-5 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS02170 a9b56809cf20012b457edccfcebcd47c 224 Pfam PF12833 Helix-turn-helix domain 110 188 5.8E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS02170 a9b56809cf20012b457edccfcebcd47c 224 SMART SM00342 104 186 2.0E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS02170 a9b56809cf20012b457edccfcebcd47c 224 Gene3D G3DSA:1.10.10.60 85 140 2.7E-7 T 29-03-2018 CHH28_RS02170 a9b56809cf20012b457edccfcebcd47c 224 SUPERFAMILY SSF46689 139 191 1.08E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS02170 a9b56809cf20012b457edccfcebcd47c 224 Gene3D G3DSA:1.10.10.60 141 200 8.6E-14 T 29-03-2018 CHH28_RS14545 4d6b00798e3ce314eb2b4b786291bc0e 127 Pfam PF12680 SnoaL-like domain 11 121 8.0E-12 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CHH28_RS14545 4d6b00798e3ce314eb2b4b786291bc0e 127 Gene3D G3DSA:3.10.450.50 3 127 2.1E-16 T 29-03-2018 CHH28_RS14545 4d6b00798e3ce314eb2b4b786291bc0e 127 SUPERFAMILY SSF54427 2 125 4.39E-16 T 29-03-2018 IPR032710 NTF2-like domain CHH28_RS11225 b562871abc8c1bce161fb31e597b9176 828 Gene3D G3DSA:3.40.1130.10 254 527 1.0E-34 T 29-03-2018 CHH28_RS11225 b562871abc8c1bce161fb31e597b9176 828 SMART SM00563 305 432 6.3E-23 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CHH28_RS11225 b562871abc8c1bce161fb31e597b9176 828 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 16 820 25.406 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 CHH28_RS11225 b562871abc8c1bce161fb31e597b9176 828 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 19 812 1.9E-287 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 CHH28_RS11225 b562871abc8c1bce161fb31e597b9176 828 Pfam PF01553 Acyltransferase 288 428 2.1E-21 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CHH28_RS11225 b562871abc8c1bce161fb31e597b9176 828 PIRSF PIRSF500064 6 826 9.0E-250 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 CHH28_RS11225 b562871abc8c1bce161fb31e597b9176 828 PIRSF PIRSF000437 22 824 2.2E-240 T 29-03-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 CHH28_RS11225 b562871abc8c1bce161fb31e597b9176 828 SUPERFAMILY SSF69593 269 494 8.76E-26 T 29-03-2018 CHH28_RS18500 ae0e86b90b5abefa8a98973723b0b3ff 216 Pfam PF00027 Cyclic nucleotide-binding domain 47 122 8.6E-16 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS18500 ae0e86b90b5abefa8a98973723b0b3ff 216 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 53 69 - T 29-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site CHH28_RS18500 ae0e86b90b5abefa8a98973723b0b3ff 216 Gene3D G3DSA:2.60.120.10 5 162 1.1E-20 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS18500 ae0e86b90b5abefa8a98973723b0b3ff 216 SMART SM00100 23 145 2.4E-10 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS18500 ae0e86b90b5abefa8a98973723b0b3ff 216 SUPERFAMILY SSF51206 6 126 4.19E-21 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CHH28_RS12835 03658ed3fa5fc01397309085b8e05915 267 Gene3D G3DSA:3.40.190.10 20 198 9.0E-15 T 29-03-2018 CHH28_RS12835 03658ed3fa5fc01397309085b8e05915 267 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 60 264 1.1E-16 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS12835 03658ed3fa5fc01397309085b8e05915 267 SUPERFAMILY SSF53850 28 264 3.48E-32 T 29-03-2018 CHH28_RS10915 070dfedbb1dd3711e6063207404e7617 450 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 248 284 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS10915 070dfedbb1dd3711e6063207404e7617 450 Gene3D G3DSA:3.90.1150.10 2 166 3.4E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS10915 070dfedbb1dd3711e6063207404e7617 450 Pfam PF00202 Aminotransferase class-III 39 413 2.1E-68 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS10915 070dfedbb1dd3711e6063207404e7617 450 SUPERFAMILY SSF53383 12 443 1.89E-94 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS10915 070dfedbb1dd3711e6063207404e7617 450 Gene3D G3DSA:3.40.640.10 176 326 3.3E-43 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS10915 070dfedbb1dd3711e6063207404e7617 450 Gene3D G3DSA:3.90.1150.10 327 446 0.0027 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 93 142 2.4E-6 T 29-03-2018 IPR000014 PAS domain CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 358 1.8E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 416 1.8E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 397 1.8E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 372 1.8E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 311 418 4.6E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 SMART SM00091 95 162 5.6E-7 T 29-03-2018 IPR000014 PAS domain CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 Pfam PF00989 PAS fold 96 146 3.4E-6 T 29-03-2018 IPR013767 PAS fold GO:0006355 CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 SUPERFAMILY SSF47384 187 265 7.85E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 SMART SM00388 201 266 4.7E-22 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 SMART SM00387 308 419 3.9E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 Gene3D G3DSA:3.30.450.20 92 206 5.9E-14 T 29-03-2018 CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 Pfam PF11808 Domain of unknown function (DUF3329) 6 84 5.0E-9 T 29-03-2018 IPR021766 Protein of unknown function DUF3329 GO:0004673 CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 Gene3D G3DSA:1.10.287.130 207 262 5.0E-20 T 29-03-2018 CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 Pfam PF00512 His Kinase A (phospho-acceptor) domain 201 265 1.0E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 Gene3D G3DSA:3.30.565.10 272 423 4.4E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 SUPERFAMILY SSF55785 106 200 4.01E-8 T 29-03-2018 IPR000014 PAS domain CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 SUPERFAMILY SSF55874 255 417 9.56E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04685 883e3d8c93f4487cef3703bcdb3a9aec 423 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 92 415 2.3E-107 T 29-03-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 CHH28_RS05265 6cbb6f0446e841bae597a84266f57cdb 336 SMART SM01004 10 334 1.9E-235 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CHH28_RS05265 6cbb6f0446e841bae597a84266f57cdb 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 2.7E-55 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CHH28_RS05265 6cbb6f0446e841bae597a84266f57cdb 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 2.7E-55 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CHH28_RS05265 6cbb6f0446e841bae597a84266f57cdb 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 2.7E-55 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CHH28_RS05265 6cbb6f0446e841bae597a84266f57cdb 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 308 327 2.7E-55 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CHH28_RS05265 6cbb6f0446e841bae597a84266f57cdb 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 2.7E-55 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CHH28_RS05265 6cbb6f0446e841bae597a84266f57cdb 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 2.7E-55 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CHH28_RS05265 6cbb6f0446e841bae597a84266f57cdb 336 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 29-03-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CHH28_RS05265 6cbb6f0446e841bae597a84266f57cdb 336 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 333 7.5E-139 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CHH28_RS05265 6cbb6f0446e841bae597a84266f57cdb 336 SUPERFAMILY SSF51569 7 335 4.98E-143 T 29-03-2018 CHH28_RS05265 6cbb6f0446e841bae597a84266f57cdb 336 PIRSF PIRSF001415 3 336 3.3E-146 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CHH28_RS05265 6cbb6f0446e841bae597a84266f57cdb 336 Gene3D G3DSA:3.20.20.70 1 336 1.5E-149 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS16030 4c225d507d87e06dc49997452cbd692a 327 Pfam PF08003 Protein of unknown function (DUF1698) 13 326 2.7E-128 T 29-03-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like CHH28_RS16030 4c225d507d87e06dc49997452cbd692a 327 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 327 51.837 T 29-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 CHH28_RS16030 4c225d507d87e06dc49997452cbd692a 327 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 11 326 3.6E-137 T 29-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 CHH28_RS16030 4c225d507d87e06dc49997452cbd692a 327 SUPERFAMILY SSF53335 92 325 1.05E-33 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS16030 4c225d507d87e06dc49997452cbd692a 327 Gene3D G3DSA:3.40.50.150 95 312 1.0E-26 T 29-03-2018 CHH28_RS10935 8590224c65d330907fe6a84fe9850281 472 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 256 271 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CHH28_RS10935 8590224c65d330907fe6a84fe9850281 472 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 383 392 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CHH28_RS10935 8590224c65d330907fe6a84fe9850281 472 SUPERFAMILY SSF55785 21 137 7.5E-23 T 29-03-2018 IPR000014 PAS domain CHH28_RS10935 8590224c65d330907fe6a84fe9850281 472 SUPERFAMILY SSF52540 170 403 4.39E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS10935 8590224c65d330907fe6a84fe9850281 472 SUPERFAMILY SSF46689 381 471 2.37E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS10935 8590224c65d330907fe6a84fe9850281 472 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 194 207 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CHH28_RS10935 8590224c65d330907fe6a84fe9850281 472 Gene3D G3DSA:1.10.8.60 343 429 1.7E-23 T 29-03-2018 CHH28_RS10935 8590224c65d330907fe6a84fe9850281 472 Gene3D G3DSA:1.10.10.60 430 472 3.5E-9 T 29-03-2018 CHH28_RS10935 8590224c65d330907fe6a84fe9850281 472 Pfam PF00158 Sigma-54 interaction domain 170 336 2.1E-69 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CHH28_RS10935 8590224c65d330907fe6a84fe9850281 472 SMART SM00382 190 334 1.7E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS10935 8590224c65d330907fe6a84fe9850281 472 Pfam PF02954 Bacterial regulatory protein, Fis family 428 469 1.5E-4 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS10935 8590224c65d330907fe6a84fe9850281 472 SMART SM00091 10 76 6.2E-13 T 29-03-2018 IPR000014 PAS domain CHH28_RS10935 8590224c65d330907fe6a84fe9850281 472 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 136 3.9E-22 T 29-03-2018 IPR000014 PAS domain CHH28_RS10935 8590224c65d330907fe6a84fe9850281 472 Pfam PF00989 PAS fold 11 126 9.3E-16 T 29-03-2018 IPR013767 PAS fold GO:0006355 CHH28_RS10935 8590224c65d330907fe6a84fe9850281 472 Gene3D G3DSA:3.40.50.300 177 342 1.2E-30 T 29-03-2018 CHH28_RS10935 8590224c65d330907fe6a84fe9850281 472 Gene3D G3DSA:3.30.450.20 4 176 6.0E-30 T 29-03-2018 CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 SUPERFAMILY SSF50969 4564 4598 4.47E-5 T 29-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 SUPERFAMILY SSF50969 4780 4903 4.47E-5 T 29-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 SUPERFAMILY SSF50969 4233 4277 4.47E-5 T 29-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 SUPERFAMILY SSF51004 3283 3507 9.42E-8 T 29-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Pfam PF08309 LVIVD repeat 3373 3416 0.0078 T 29-03-2018 IPR013211 LVIVD CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Pfam PF08309 LVIVD repeat 3331 3367 1.6E-7 T 29-03-2018 IPR013211 LVIVD CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Pfam PF08309 LVIVD repeat 4824 4855 0.2 T 29-03-2018 IPR013211 LVIVD CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Pfam PF08309 LVIVD repeat 4864 4897 0.33 T 29-03-2018 IPR013211 LVIVD CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Gene3D G3DSA:2.60.120.640 2164 2245 0.32 T 29-03-2018 CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Gene3D G3DSA:2.40.50.70 2806 2877 0.0059 T 29-03-2018 CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Gene3D G3DSA:2.40.50.70 747 800 1.7E-6 T 29-03-2018 CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Gene3D G3DSA:2.40.50.70 2072 2129 0.31 T 29-03-2018 CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Gene3D G3DSA:2.130.10.10 3231 3537 7.5E-4 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Gene3D G3DSA:2.60.40.10 3733 3825 0.43 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Gene3D G3DSA:2.60.40.10 3640 3722 1.5E-7 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Pfam PF01833 IPT/TIG domain 4470 4543 1.7E-6 T 29-03-2018 IPR002909 IPT domain CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Pfam PF01833 IPT/TIG domain 5162 5232 4.1E-7 T 29-03-2018 IPR002909 IPT domain CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Gene3D G3DSA:2.60.40.10 4461 4548 2.7E-10 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Gene3D G3DSA:2.60.40.10 5154 5249 4.4E-11 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 SUPERFAMILY SSF81296 5161 5238 2.42E-7 T 29-03-2018 IPR014756 Immunoglobulin E-set CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Gene3D G3DSA:2.60.40.1310 2704 2784 0.027 T 29-03-2018 CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Gene3D G3DSA:2.60.40.10 2502 2703 2.9E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Gene3D G3DSA:2.130.10.10 4549 5048 9.7E-4 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Gene3D G3DSA:3.40.1850.10 801 885 0.51 T 29-03-2018 CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Pfam PF13205 Bacterial Ig-like domain 4269 4373 1.1E-8 T 29-03-2018 IPR032812 SbsA, Ig-like domain CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 SMART SM00429 5156 5246 1.1 T 29-03-2018 IPR002909 IPT domain CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 SMART SM00429 3641 3730 0.67 T 29-03-2018 IPR002909 IPT domain CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 SMART SM00429 4467 4555 2.3 T 29-03-2018 IPR002909 IPT domain CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Gene3D G3DSA:2.60.40.10 1317 1578 0.038 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 Gene3D G3DSA:2.60.40.10 411 518 0.023 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS16460 07b64b10342c649ba9b8e76f5243660b 5309 SUPERFAMILY SSF81296 4470 4543 7.77E-6 T 29-03-2018 IPR014756 Immunoglobulin E-set CHH28_RS15375 85ebefc9c43dae315520b6b0c3a5c64b 617 Pfam PF13387 Domain of unknown function (DUF4105) 120 290 3.6E-57 T 29-03-2018 IPR025178 Domain of unknown function DUF4105 CHH28_RS00835 4b029211e42a0c934421f2c8d8016a50 547 Gene3D G3DSA:3.40.50.300 5 272 9.2E-55 T 29-03-2018 CHH28_RS00835 4b029211e42a0c934421f2c8d8016a50 547 Gene3D G3DSA:3.40.50.300 273 545 1.5E-73 T 29-03-2018 CHH28_RS00835 4b029211e42a0c934421f2c8d8016a50 547 SUPERFAMILY SSF52540 272 530 1.71E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS00835 4b029211e42a0c934421f2c8d8016a50 547 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 495 536 3.0E-9 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CHH28_RS00835 4b029211e42a0c934421f2c8d8016a50 547 SMART SM00382 300 493 1.8E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS00835 4b029211e42a0c934421f2c8d8016a50 547 SMART SM00382 33 232 8.8E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS00835 4b029211e42a0c934421f2c8d8016a50 547 ProSitePatterns PS00211 ABC transporters family signature. 416 430 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS00835 4b029211e42a0c934421f2c8d8016a50 547 SUPERFAMILY SSF52540 4 257 1.92E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS00835 4b029211e42a0c934421f2c8d8016a50 547 Pfam PF00005 ABC transporter 291 444 2.9E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS00835 4b029211e42a0c934421f2c8d8016a50 547 Pfam PF00005 ABC transporter 24 182 7.1E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS15075 b6fbaaceabe85354409de4bcf3973f1c 404 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 90 104 - T 29-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CHH28_RS15075 b6fbaaceabe85354409de4bcf3973f1c 404 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 11 400 51.532 T 29-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CHH28_RS15075 b6fbaaceabe85354409de4bcf3973f1c 404 Gene3D G3DSA:3.40.50.1100 208 401 2.8E-37 T 29-03-2018 CHH28_RS15075 b6fbaaceabe85354409de4bcf3973f1c 404 PIRSF PIRSF001413 2 404 1.1E-162 T 29-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CHH28_RS15075 b6fbaaceabe85354409de4bcf3973f1c 404 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 62 387 2.9E-43 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CHH28_RS15075 b6fbaaceabe85354409de4bcf3973f1c 404 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 16 398 2.1E-188 T 29-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CHH28_RS15075 b6fbaaceabe85354409de4bcf3973f1c 404 SUPERFAMILY SSF53686 12 397 8.91E-148 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CHH28_RS15075 b6fbaaceabe85354409de4bcf3973f1c 404 Gene3D G3DSA:3.40.50.1100 77 207 7.9E-37 T 29-03-2018 CHH28_RS15075 b6fbaaceabe85354409de4bcf3973f1c 404 Gene3D G3DSA:3.40.50.1100 18 76 4.4E-7 T 29-03-2018 CHH28_RS10980 99b0df6f894accd43fec0ce0626a85ce 208 SUPERFAMILY SSF52058 75 191 3.57E-16 T 29-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like CHH28_RS10980 99b0df6f894accd43fec0ce0626a85ce 208 Gene3D G3DSA:3.80.10.10 59 206 3.2E-17 T 29-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like CHH28_RS11045 1592b400ec2b2797b6ad4e5f514fa1a9 163 SUPERFAMILY SSF54637 22 162 4.87E-24 T 29-03-2018 IPR029069 HotDog domain CHH28_RS11045 1592b400ec2b2797b6ad4e5f514fa1a9 163 Gene3D G3DSA:3.10.129.10 9 157 7.4E-25 T 29-03-2018 CHH28_RS11045 1592b400ec2b2797b6ad4e5f514fa1a9 163 Pfam PF14539 Domain of unknown function (DUF4442) 24 156 2.3E-36 T 29-03-2018 IPR027961 Protein of unknown function DUF4442 CHH28_RS13210 1aaad4dabe97bcdb4551f6bcf6b1f6b6 380 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 254 1.2E-33 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CHH28_RS13210 1aaad4dabe97bcdb4551f6bcf6b1f6b6 380 Pfam PF11890 Domain of unknown function (DUF3410) 287 357 1.7E-12 T 29-03-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 CHH28_RS13210 1aaad4dabe97bcdb4551f6bcf6b1f6b6 380 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 26 255 1.5E-13 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CHH28_RS13210 1aaad4dabe97bcdb4551f6bcf6b1f6b6 380 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 360 42.172 T 29-03-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 CHH28_RS13210 1aaad4dabe97bcdb4551f6bcf6b1f6b6 380 SUPERFAMILY SSF51735 92 255 3.18E-31 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS13210 1aaad4dabe97bcdb4551f6bcf6b1f6b6 380 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 195 211 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CHH28_RS13210 1aaad4dabe97bcdb4551f6bcf6b1f6b6 380 Gene3D G3DSA:3.40.50.720 101 255 1.3E-30 T 29-03-2018 CHH28_RS13210 1aaad4dabe97bcdb4551f6bcf6b1f6b6 380 Gene3D G3DSA:3.40.50.720 1 100 1.1E-16 T 29-03-2018 CHH28_RS13210 1aaad4dabe97bcdb4551f6bcf6b1f6b6 380 SUPERFAMILY SSF52283 6 128 3.83E-16 T 29-03-2018 CHH28_RS18035 f5a94a73c9294f49db1a50cb92db0183 313 Pfam PF00691 OmpA family 184 280 2.3E-16 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS18035 f5a94a73c9294f49db1a50cb92db0183 313 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 231 248 1.0E-16 T 29-03-2018 CHH28_RS18035 f5a94a73c9294f49db1a50cb92db0183 313 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 269 289 1.0E-16 T 29-03-2018 CHH28_RS18035 f5a94a73c9294f49db1a50cb92db0183 313 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 146 165 1.0E-16 T 29-03-2018 CHH28_RS18035 f5a94a73c9294f49db1a50cb92db0183 313 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 121 143 1.0E-16 T 29-03-2018 CHH28_RS18035 f5a94a73c9294f49db1a50cb92db0183 313 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 44 62 1.0E-16 T 29-03-2018 CHH28_RS18035 f5a94a73c9294f49db1a50cb92db0183 313 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 82 100 1.0E-16 T 29-03-2018 CHH28_RS18035 f5a94a73c9294f49db1a50cb92db0183 313 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 249 268 1.0E-16 T 29-03-2018 CHH28_RS18035 f5a94a73c9294f49db1a50cb92db0183 313 SUPERFAMILY SSF103088 155 285 3.53E-26 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS18035 f5a94a73c9294f49db1a50cb92db0183 313 Gene3D G3DSA:3.30.1330.60 79 300 7.1E-25 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS01815 d433848166354324834f8b91158c13da 221 Gene3D G3DSA:3.30.70.1070 148 206 2.1E-4 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CHH28_RS01815 d433848166354324834f8b91158c13da 221 Gene3D G3DSA:3.30.70.1070 38 144 9.1E-7 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CHH28_RS01815 d433848166354324834f8b91158c13da 221 SUPERFAMILY SSF110997 73 141 7.85E-6 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CHH28_RS12290 e4fe0de1670cc86197008c86eea33a92 367 Pfam PF03969 AFG1-like ATPase 3 363 4.8E-148 T 29-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 CHH28_RS12290 e4fe0de1670cc86197008c86eea33a92 367 SUPERFAMILY SSF52540 32 181 7.72E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS12290 e4fe0de1670cc86197008c86eea33a92 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 366 51.887 T 29-03-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 CHH28_RS12290 e4fe0de1670cc86197008c86eea33a92 367 Gene3D G3DSA:3.40.50.300 15 360 5.9E-14 T 29-03-2018 CHH28_RS14540 6d1c4b2d9340f6ea1d02e9c797843dd5 673 Gene3D G3DSA:3.20.20.70 3 370 1.3E-104 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS14540 6d1c4b2d9340f6ea1d02e9c797843dd5 673 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 643 2.7E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS14540 6d1c4b2d9340f6ea1d02e9c797843dd5 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 619 635 5.0E-13 T 29-03-2018 CHH28_RS14540 6d1c4b2d9340f6ea1d02e9c797843dd5 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 500 518 5.0E-13 T 29-03-2018 CHH28_RS14540 6d1c4b2d9340f6ea1d02e9c797843dd5 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 379 398 5.0E-13 T 29-03-2018 CHH28_RS14540 6d1c4b2d9340f6ea1d02e9c797843dd5 673 Gene3D G3DSA:3.50.50.60 481 626 4.3E-36 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS14540 6d1c4b2d9340f6ea1d02e9c797843dd5 673 Gene3D G3DSA:3.40.50.720 372 480 2.7E-24 T 29-03-2018 CHH28_RS14540 6d1c4b2d9340f6ea1d02e9c797843dd5 673 SUPERFAMILY SSF51395 4 363 1.69E-105 T 29-03-2018 CHH28_RS14540 6d1c4b2d9340f6ea1d02e9c797843dd5 673 SUPERFAMILY SSF51905 375 607 2.59E-42 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS14540 6d1c4b2d9340f6ea1d02e9c797843dd5 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 378 400 3.4E-7 T 29-03-2018 CHH28_RS14540 6d1c4b2d9340f6ea1d02e9c797843dd5 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 620 634 3.4E-7 T 29-03-2018 CHH28_RS14540 6d1c4b2d9340f6ea1d02e9c797843dd5 673 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 333 2.3E-79 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CHH28_RS19570 9a1d263e0a88427943e329882ae5ba99 318 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 29 317 3.3E-108 T 29-03-2018 IPR011757 Lytic transglycosylase MltB CHH28_RS19570 9a1d263e0a88427943e329882ae5ba99 318 Gene3D G3DSA:1.10.8.350 19 88 2.5E-6 T 29-03-2018 CHH28_RS19570 9a1d263e0a88427943e329882ae5ba99 318 Gene3D G3DSA:1.10.8.350 89 192 5.5E-32 T 29-03-2018 CHH28_RS19570 9a1d263e0a88427943e329882ae5ba99 318 Gene3D G3DSA:1.10.530.10 198 318 1.2E-38 T 29-03-2018 CHH28_RS19570 9a1d263e0a88427943e329882ae5ba99 318 Pfam PF13406 Transglycosylase SLT domain 24 315 4.6E-100 T 29-03-2018 IPR031304 Transglycosylase SLT domain 2 CHH28_RS19570 9a1d263e0a88427943e329882ae5ba99 318 SUPERFAMILY SSF53955 8 317 2.25E-84 T 29-03-2018 IPR023346 Lysozyme-like domain CHH28_RS09310 deeed5989f8048c0534889aefc086941 117 Gene3D G3DSA:2.40.10.220 1 117 9.4E-21 T 29-03-2018 CHH28_RS09310 deeed5989f8048c0534889aefc086941 117 Pfam PF07238 PilZ domain 2 98 1.3E-14 T 29-03-2018 IPR009875 PilZ domain GO:0035438 CHH28_RS09310 deeed5989f8048c0534889aefc086941 117 PIRSF PIRSF028141 1 117 6.1E-36 T 29-03-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type CHH28_RS09310 deeed5989f8048c0534889aefc086941 117 SUPERFAMILY SSF141371 1 115 8.83E-30 T 29-03-2018 CHH28_RS06490 a10e82fb843901e143101593886d177e 547 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 14 543 2.2E-107 T 29-03-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 CHH28_RS06490 a10e82fb843901e143101593886d177e 547 Gene3D G3DSA:3.40.50.300 332 547 1.6E-39 T 29-03-2018 CHH28_RS06490 a10e82fb843901e143101593886d177e 547 Gene3D G3DSA:1.20.1560.10 8 322 5.9E-32 T 29-03-2018 CHH28_RS06490 a10e82fb843901e143101593886d177e 547 Pfam PF00664 ABC transporter transmembrane region 28 209 3.9E-13 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS06490 a10e82fb843901e143101593886d177e 547 Pfam PF00005 ABC transporter 356 490 3.7E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS06490 a10e82fb843901e143101593886d177e 547 SUPERFAMILY SSF90123 19 321 5.36E-30 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS06490 a10e82fb843901e143101593886d177e 547 SUPERFAMILY SSF52540 333 545 9.61E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS06490 a10e82fb843901e143101593886d177e 547 SMART SM00382 362 539 7.6E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS12310 e8a9a654b9b9d7fb094d4f4efd657df7 560 Gene3D G3DSA:4.10.450.10 35 103 1.7E-28 T 29-03-2018 CHH28_RS12310 e8a9a654b9b9d7fb094d4f4efd657df7 560 TIGRFAM TIGR01810 betA: choline dehydrogenase 5 532 2.0E-240 T 29-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CHH28_RS12310 e8a9a654b9b9d7fb094d4f4efd657df7 560 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CHH28_RS12310 e8a9a654b9b9d7fb094d4f4efd657df7 560 SUPERFAMILY SSF54373 290 472 2.85E-60 T 29-03-2018 CHH28_RS12310 e8a9a654b9b9d7fb094d4f4efd657df7 560 Pfam PF05199 GMC oxidoreductase 386 522 8.4E-37 T 29-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 CHH28_RS12310 e8a9a654b9b9d7fb094d4f4efd657df7 560 SUPERFAMILY SSF51905 471 530 7.59E-88 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS12310 e8a9a654b9b9d7fb094d4f4efd657df7 560 SUPERFAMILY SSF51905 3 288 7.59E-88 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS12310 e8a9a654b9b9d7fb094d4f4efd657df7 560 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 254 268 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CHH28_RS12310 e8a9a654b9b9d7fb094d4f4efd657df7 560 Gene3D G3DSA:3.30.560.10 104 485 6.3E-107 T 29-03-2018 CHH28_RS12310 e8a9a654b9b9d7fb094d4f4efd657df7 560 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 2 549 58.499 T 29-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CHH28_RS12310 e8a9a654b9b9d7fb094d4f4efd657df7 560 PIRSF PIRSF000137 1 535 4.0E-150 T 29-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CHH28_RS12310 e8a9a654b9b9d7fb094d4f4efd657df7 560 Pfam PF00732 GMC oxidoreductase 4 295 8.3E-99 T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CHH28_RS13235 77bd4cda8b5c442e2d083a336e24730d 151 Pfam PF01047 MarR family 37 100 6.1E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS13235 77bd4cda8b5c442e2d083a336e24730d 151 Gene3D G3DSA:1.10.10.10 1 150 2.4E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS13235 77bd4cda8b5c442e2d083a336e24730d 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 3.8E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS13235 77bd4cda8b5c442e2d083a336e24730d 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 3.8E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS13235 77bd4cda8b5c442e2d083a336e24730d 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 3.8E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS13235 77bd4cda8b5c442e2d083a336e24730d 151 SMART SM00347 30 133 1.0E-19 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS13235 77bd4cda8b5c442e2d083a336e24730d 151 SUPERFAMILY SSF46785 5 148 3.41E-32 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS07135 8ccebe442576be84ea5c101e2a0e4aaa 612 Pfam PF10162 G8 domain 28 141 1.7E-11 T 29-03-2018 IPR019316 G8 domain CHH28_RS07135 8ccebe442576be84ea5c101e2a0e4aaa 612 Gene3D G3DSA:2.160.20.10 449 603 0.057 T 29-03-2018 IPR012334 Pectin lyase fold CHH28_RS07135 8ccebe442576be84ea5c101e2a0e4aaa 612 Gene3D G3DSA:2.160.20.10 22 448 1.2E-6 T 29-03-2018 IPR012334 Pectin lyase fold CHH28_RS07135 8ccebe442576be84ea5c101e2a0e4aaa 612 SMART SM01225 27 150 3.3E-7 T 29-03-2018 IPR019316 G8 domain CHH28_RS07135 8ccebe442576be84ea5c101e2a0e4aaa 612 SUPERFAMILY SSF51126 218 252 1.77E-5 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CHH28_RS07135 8ccebe442576be84ea5c101e2a0e4aaa 612 SUPERFAMILY SSF51126 388 525 1.77E-5 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CHH28_RS07135 8ccebe442576be84ea5c101e2a0e4aaa 612 SUPERFAMILY SSF51126 294 353 1.77E-5 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CHH28_RS11520 219b17005d288e7ec249da903acb5b73 266 Pfam PF01553 Acyltransferase 70 194 8.4E-8 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CHH28_RS11520 219b17005d288e7ec249da903acb5b73 266 SUPERFAMILY SSF69593 70 199 6.67E-6 T 29-03-2018 CHH28_RS11520 219b17005d288e7ec249da903acb5b73 266 SMART SM00563 76 197 1.4E-7 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CHH28_RS11520 219b17005d288e7ec249da903acb5b73 266 Gene3D G3DSA:3.40.1130.10 34 264 1.9E-27 T 29-03-2018 CHH28_RS16390 6484dfb9db39f8f04f76d3de5429d83a 411 SUPERFAMILY SSF51261 213 359 2.2E-17 T 29-03-2018 IPR011055 Duplicated hybrid motif CHH28_RS16390 6484dfb9db39f8f04f76d3de5429d83a 411 Gene3D G3DSA:2.70.70.10 232 406 3.2E-19 T 29-03-2018 CHH28_RS16390 6484dfb9db39f8f04f76d3de5429d83a 411 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 259 277 2.2E-45 T 29-03-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 CHH28_RS16390 6484dfb9db39f8f04f76d3de5429d83a 411 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 365 388 2.2E-45 T 29-03-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 CHH28_RS16390 6484dfb9db39f8f04f76d3de5429d83a 411 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 237 258 2.2E-45 T 29-03-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 CHH28_RS16390 6484dfb9db39f8f04f76d3de5429d83a 411 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 338 358 2.2E-45 T 29-03-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 CHH28_RS16390 6484dfb9db39f8f04f76d3de5429d83a 411 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 286 304 2.2E-45 T 29-03-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 CHH28_RS16390 6484dfb9db39f8f04f76d3de5429d83a 411 Pfam PF01551 Peptidase family M23 279 360 1.0E-10 T 29-03-2018 IPR016047 Peptidase M23 CHH28_RS07830 ac02954696cdd4cacce406a42b8ae0ac 596 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 31 5.3E-11 T 29-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CHH28_RS07830 ac02954696cdd4cacce406a42b8ae0ac 596 Gene3D G3DSA:1.10.540.10 33 160 1.3E-16 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS07830 ac02954696cdd4cacce406a42b8ae0ac 596 SUPERFAMILY SSF56645 37 281 1.7E-55 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CHH28_RS07830 ac02954696cdd4cacce406a42b8ae0ac 596 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 9.5E-15 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CHH28_RS07830 ac02954696cdd4cacce406a42b8ae0ac 596 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 7.4E-21 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS07830 ac02954696cdd4cacce406a42b8ae0ac 596 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 37 158 3.4E-11 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS07830 ac02954696cdd4cacce406a42b8ae0ac 596 Gene3D G3DSA:2.40.110.10 161 278 1.1E-22 T 29-03-2018 CHH28_RS07830 ac02954696cdd4cacce406a42b8ae0ac 596 Gene3D G3DSA:1.20.140.10 279 465 2.1E-40 T 29-03-2018 CHH28_RS07830 ac02954696cdd4cacce406a42b8ae0ac 596 SUPERFAMILY SSF47203 289 463 2.09E-48 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS07830 ac02954696cdd4cacce406a42b8ae0ac 596 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 470 589 5.9E-34 T 29-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CHH28_RS19695 c0c17cdee3d98e1273b2cf6b9a74b88a 268 SUPERFAMILY SSF52540 2 266 1.02E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS19695 c0c17cdee3d98e1273b2cf6b9a74b88a 268 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 265 1.6E-112 T 29-03-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 CHH28_RS19695 c0c17cdee3d98e1273b2cf6b9a74b88a 268 Gene3D G3DSA:3.40.50.300 1 258 5.2E-54 T 29-03-2018 CHH28_RS19695 c0c17cdee3d98e1273b2cf6b9a74b88a 268 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 225 1.1E-21 T 29-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CHH28_RS19695 c0c17cdee3d98e1273b2cf6b9a74b88a 268 PIRSF PIRSF003092 1 268 1.0E-92 T 29-03-2018 IPR025501 ATP binding protein MinD CHH28_RS16205 449332edf92ed160244266c5540efb0e 77 SUPERFAMILY SSF46589 11 71 1.15E-12 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 CHH28_RS16205 449332edf92ed160244266c5540efb0e 77 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 12 71 1.9E-13 T 29-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CHH28_RS16205 449332edf92ed160244266c5540efb0e 77 Gene3D G3DSA:1.10.287.380 5 73 9.0E-15 T 29-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CHH28_RS01455 2f3c489d6cc3e7b0c37ddb62ba6396e4 173 Pfam PF13185 GAF domain 45 165 1.4E-14 T 29-03-2018 IPR003018 GAF domain GO:0005515 CHH28_RS01455 2f3c489d6cc3e7b0c37ddb62ba6396e4 173 SUPERFAMILY SSF55781 15 164 1.98E-42 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS01455 2f3c489d6cc3e7b0c37ddb62ba6396e4 173 SMART SM00065 40 172 6.5E-6 T 29-03-2018 IPR003018 GAF domain GO:0005515 CHH28_RS01455 2f3c489d6cc3e7b0c37ddb62ba6396e4 173 Gene3D G3DSA:3.30.450.40 10 170 1.8E-28 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS18725 de2a6e6681ba5baf0c7e598b2584aad9 89 Pfam PF01313 Bacterial export proteins, family 3 7 78 2.7E-26 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CHH28_RS18725 de2a6e6681ba5baf0c7e598b2584aad9 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.8E-16 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CHH28_RS18725 de2a6e6681ba5baf0c7e598b2584aad9 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.8E-16 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CHH28_RS18725 de2a6e6681ba5baf0c7e598b2584aad9 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.8E-16 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CHH28_RS18725 de2a6e6681ba5baf0c7e598b2584aad9 89 PIRSF PIRSF004669 1 89 6.8E-27 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CHH28_RS01875 294b5d633a7be02f4542ae0587985e12 453 Pfam PF00534 Glycosyl transferases group 1 273 419 1.1E-16 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CHH28_RS01875 294b5d633a7be02f4542ae0587985e12 453 Gene3D G3DSA:3.40.50.2000 218 451 9.6E-25 T 29-03-2018 CHH28_RS01875 294b5d633a7be02f4542ae0587985e12 453 SUPERFAMILY SSF53756 91 421 3.82E-37 T 29-03-2018 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 Gene3D G3DSA:1.10.730.10 569 863 6.8E-62 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 423 578 1.6E-9 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 623 662 2.3E-5 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 8.5E-28 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 Gene3D G3DSA:3.40.50.620 1 228 3.5E-81 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 SUPERFAMILY SSF52374 421 670 3.05E-145 T 29-03-2018 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 SUPERFAMILY SSF52374 5 226 3.05E-145 T 29-03-2018 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 863 23.202 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 SUPERFAMILY SSF47323 665 863 3.18E-37 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 Gene3D G3DSA:3.40.50.620 409 568 1.6E-43 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 Pfam PF08264 Anticodon-binding domain of tRNA 703 825 1.9E-17 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 Gene3D G3DSA:3.90.740.10 229 408 1.9E-54 T 29-03-2018 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 3.4E-51 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 490 508 3.4E-51 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 3.4E-51 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 562 572 3.4E-51 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 529 551 3.4E-51 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 3.4E-51 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 3.4E-51 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 408 8.5E-79 T 29-03-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 863 0.0 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CHH28_RS08115 82bd25a8339c0ee277a57468e25aecea 864 SUPERFAMILY SSF50677 226 420 4.81E-56 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CHH28_RS12525 4547f972d124d0dfe544475912bf221e 353 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 107 125 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CHH28_RS12525 4547f972d124d0dfe544475912bf221e 353 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 23 333 47.616 T 29-03-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 CHH28_RS12525 4547f972d124d0dfe544475912bf221e 353 PIRSF PIRSF006621 7 345 8.5E-72 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CHH28_RS12525 4547f972d124d0dfe544475912bf221e 353 Pfam PF01207 Dihydrouridine synthase (Dus) 20 308 1.2E-69 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CHH28_RS12525 4547f972d124d0dfe544475912bf221e 353 Gene3D G3DSA:3.20.20.70 14 255 1.1E-48 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS12525 4547f972d124d0dfe544475912bf221e 353 SUPERFAMILY SSF51395 17 318 5.13E-65 T 29-03-2018 CHH28_RS04280 b7d97ef380af53626c18386f0ee2054e 807 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 17 777 3.8E-235 T 29-03-2018 IPR018752 Uncharacterised protein family UPF0753 CHH28_RS04280 b7d97ef380af53626c18386f0ee2054e 807 Hamap MF_01871 UPF0753 protein . 9 792 22.167 T 29-03-2018 IPR018752 Uncharacterised protein family UPF0753 CHH28_RS04280 b7d97ef380af53626c18386f0ee2054e 807 Gene3D G3DSA:2.130.10.10 259 805 4.4E-4 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS12635 61fd08115f2d0150862dd110470a462a 291 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 29-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CHH28_RS12635 61fd08115f2d0150862dd110470a462a 291 Pfam PF00701 Dihydrodipicolinate synthetase family 2 284 2.4E-100 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CHH28_RS12635 61fd08115f2d0150862dd110470a462a 291 SUPERFAMILY SSF51569 1 289 4.4E-99 T 29-03-2018 CHH28_RS12635 61fd08115f2d0150862dd110470a462a 291 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 29-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CHH28_RS12635 61fd08115f2d0150862dd110470a462a 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 2.5E-31 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CHH28_RS12635 61fd08115f2d0150862dd110470a462a 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 2.5E-31 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CHH28_RS12635 61fd08115f2d0150862dd110470a462a 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 2.5E-31 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CHH28_RS12635 61fd08115f2d0150862dd110470a462a 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 2.5E-31 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CHH28_RS12635 61fd08115f2d0150862dd110470a462a 291 PIRSF PIRSF001365 1 291 1.8E-92 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CHH28_RS12635 61fd08115f2d0150862dd110470a462a 291 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 285 2.0E-106 T 29-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CHH28_RS12635 61fd08115f2d0150862dd110470a462a 291 Gene3D G3DSA:3.20.20.70 1 291 3.7E-96 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS12635 61fd08115f2d0150862dd110470a462a 291 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 64.196 T 29-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CHH28_RS12635 61fd08115f2d0150862dd110470a462a 291 SMART SM01130 1 289 1.8E-138 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CHH28_RS14925 6a0e0fd6cbdd35211d242048f6c71d41 395 SUPERFAMILY SSF54506 8 185 9.42E-68 T 29-03-2018 CHH28_RS14925 6a0e0fd6cbdd35211d242048f6c71d41 395 Gene3D G3DSA:3.10.310.10 193 373 2.3E-70 T 29-03-2018 CHH28_RS14925 6a0e0fd6cbdd35211d242048f6c71d41 395 Gene3D G3DSA:3.10.310.10 6 192 6.2E-81 T 29-03-2018 CHH28_RS14925 6a0e0fd6cbdd35211d242048f6c71d41 395 Pfam PF04303 PrpF protein 9 391 2.8E-169 T 29-03-2018 IPR007400 PrpF protein CHH28_RS14925 6a0e0fd6cbdd35211d242048f6c71d41 395 SUPERFAMILY SSF54506 189 391 2.75E-76 T 29-03-2018 CHH28_RS14925 6a0e0fd6cbdd35211d242048f6c71d41 395 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 8 392 3.4E-220 T 29-03-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 CHH28_RS02225 325d4d8f65889c0db0d860a175ab221e 108 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 8 102 1.4E-18 T 29-03-2018 IPR008407 Branched-chain amino acid transport, AzlD CHH28_RS02225 325d4d8f65889c0db0d860a175ab221e 108 PIRSF PIRSF003203 1 107 3.1E-27 T 29-03-2018 IPR008407 Branched-chain amino acid transport, AzlD CHH28_RS19450 3a8284f8186797d85e53a7e372335787 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 4.2E-18 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS19450 3a8284f8186797d85e53a7e372335787 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 4.2E-18 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS19450 3a8284f8186797d85e53a7e372335787 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 187 207 4.2E-18 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS19450 3a8284f8186797d85e53a7e372335787 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 508 8.1E-36 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS19450 3a8284f8186797d85e53a7e372335787 542 Gene3D G3DSA:1.10.287.950 308 498 5.3E-46 T 29-03-2018 CHH28_RS19450 3a8284f8186797d85e53a7e372335787 542 Gene3D G3DSA:1.10.287.1060 499 542 0.4 T 29-03-2018 CHH28_RS19450 3a8284f8186797d85e53a7e372335787 542 SMART SM00283 280 541 2.6E-64 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS19450 3a8284f8186797d85e53a7e372335787 542 Gene3D G3DSA:1.10.287.1060 75 173 0.044 T 29-03-2018 CHH28_RS19450 3a8284f8186797d85e53a7e372335787 542 SUPERFAMILY SSF58104 233 541 1.44E-72 T 29-03-2018 CHH28_RS19450 3a8284f8186797d85e53a7e372335787 542 SMART SM00304 211 265 1.9E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS19450 3a8284f8186797d85e53a7e372335787 542 Gene3D G3DSA:1.10.287.950 174 307 2.9E-5 T 29-03-2018 CHH28_RS19450 3a8284f8186797d85e53a7e372335787 542 Pfam PF00672 HAMP domain 213 261 3.3E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS00305 1c7c170df150b0eb1a29be564b948b67 352 Gene3D G3DSA:3.40.50.2000 167 344 5.9E-28 T 29-03-2018 CHH28_RS00305 1c7c170df150b0eb1a29be564b948b67 352 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 4 345 1.0E-94 T 29-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CHH28_RS00305 1c7c170df150b0eb1a29be564b948b67 352 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 178 338 4.7E-38 T 29-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CHH28_RS00305 1c7c170df150b0eb1a29be564b948b67 352 Gene3D G3DSA:3.40.50.2000 2 166 1.6E-36 T 29-03-2018 CHH28_RS00305 1c7c170df150b0eb1a29be564b948b67 352 SUPERFAMILY SSF53756 4 350 9.42E-112 T 29-03-2018 CHH28_RS00305 1c7c170df150b0eb1a29be564b948b67 352 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 136 4.8E-40 T 29-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CHH28_RS00305 1c7c170df150b0eb1a29be564b948b67 352 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 350 34.067 T 29-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CHH28_RS12195 1fa9e29c8b2098f93cbc4a57003550b6 247 Pfam PF01852 START domain 34 206 2.1E-13 T 29-03-2018 IPR002913 START domain GO:0008289 CHH28_RS12195 1fa9e29c8b2098f93cbc4a57003550b6 247 PIRSF PIRSF039033 14 237 6.1E-62 T 29-03-2018 IPR028347 START domain-containing protein CHH28_RS12195 1fa9e29c8b2098f93cbc4a57003550b6 247 SUPERFAMILY SSF55961 32 217 4.47E-36 T 29-03-2018 CHH28_RS12195 1fa9e29c8b2098f93cbc4a57003550b6 247 Gene3D G3DSA:3.30.530.20 35 227 9.4E-28 T 29-03-2018 IPR023393 START-like domain CHH28_RS03485 a5e4bdc04096532f34acaa629e198a0f 303 Gene3D G3DSA:1.10.10.10 14 99 8.8E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS03485 a5e4bdc04096532f34acaa629e198a0f 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 78 2.2E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS03485 a5e4bdc04096532f34acaa629e198a0f 303 SUPERFAMILY SSF53850 104 291 4.34E-27 T 29-03-2018 CHH28_RS03485 a5e4bdc04096532f34acaa629e198a0f 303 Pfam PF03466 LysR substrate binding domain 103 289 3.0E-22 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS03485 a5e4bdc04096532f34acaa629e198a0f 303 SUPERFAMILY SSF46785 18 127 2.64E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS03485 a5e4bdc04096532f34acaa629e198a0f 303 Gene3D G3DSA:3.40.190.10 101 186 3.5E-15 T 29-03-2018 CHH28_RS03485 a5e4bdc04096532f34acaa629e198a0f 303 Gene3D G3DSA:3.40.190.10 190 297 0.013 T 29-03-2018 CHH28_RS11510 49f9dd98cb87ebd22ac7fa7695a013f9 378 SUPERFAMILY SSF53756 1 376 3.84E-32 T 29-03-2018 CHH28_RS11510 49f9dd98cb87ebd22ac7fa7695a013f9 378 Gene3D G3DSA:3.40.50.2000 179 370 7.6E-16 T 29-03-2018 CHH28_RS11510 49f9dd98cb87ebd22ac7fa7695a013f9 378 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 374 6.1E-127 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 CHH28_RS11510 49f9dd98cb87ebd22ac7fa7695a013f9 378 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 1 376 40.015 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 CHH28_RS11510 49f9dd98cb87ebd22ac7fa7695a013f9 378 Gene3D G3DSA:3.40.50.2000 1 178 2.9E-5 T 29-03-2018 CHH28_RS11510 49f9dd98cb87ebd22ac7fa7695a013f9 378 Pfam PF02684 Lipid-A-disaccharide synthetase 3 370 9.7E-122 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 CHH28_RS02085 06995c5b25739f71946d758523a31467 83 Pfam PF10985 Protein of unknown function (DUF2805) 9 79 4.0E-35 T 29-03-2018 IPR019882 Conserved hypothetical protein CHP03643 CHH28_RS02085 06995c5b25739f71946d758523a31467 83 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 8 76 6.3E-36 T 29-03-2018 IPR019882 Conserved hypothetical protein CHP03643 CHH28_RS00560 2c2a808082100c16ad208c7eea5a8658 559 SMART SM00382 21 513 0.0049 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS00560 2c2a808082100c16ad208c7eea5a8658 559 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 556 3.5E-159 T 29-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CHH28_RS00560 2c2a808082100c16ad208c7eea5a8658 559 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 512 1.2E-21 T 29-03-2018 IPR003395 RecF/RecN/SMC, N-terminal CHH28_RS00560 2c2a808082100c16ad208c7eea5a8658 559 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 25 38 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CHH28_RS00560 2c2a808082100c16ad208c7eea5a8658 559 Gene3D G3DSA:3.40.50.300 1 210 4.0E-26 T 29-03-2018 CHH28_RS00560 2c2a808082100c16ad208c7eea5a8658 559 PIRSF PIRSF003128 1 559 6.2E-160 T 29-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CHH28_RS00560 2c2a808082100c16ad208c7eea5a8658 559 Gene3D G3DSA:3.40.50.300 242 530 1.4E-18 T 29-03-2018 CHH28_RS00560 2c2a808082100c16ad208c7eea5a8658 559 SUPERFAMILY SSF52540 3 50 1.96E-29 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS00560 2c2a808082100c16ad208c7eea5a8658 559 SUPERFAMILY SSF52540 290 508 1.96E-29 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS00560 2c2a808082100c16ad208c7eea5a8658 559 SUPERFAMILY SSF52540 1 221 1.52E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS08605 28b4b7340de6d4d39c253ff8f4d67765 451 SUPERFAMILY SSF54631 138 277 6.44E-31 T 29-03-2018 CHH28_RS08605 28b4b7340de6d4d39c253ff8f4d67765 451 Gene3D G3DSA:3.10.580.10 200 283 2.1E-9 T 29-03-2018 CHH28_RS08605 28b4b7340de6d4d39c253ff8f4d67765 451 Pfam PF00571 CBS domain 139 194 5.2E-7 T 29-03-2018 IPR000644 CBS domain CHH28_RS08605 28b4b7340de6d4d39c253ff8f4d67765 451 Pfam PF00571 CBS domain 202 256 6.0E-6 T 29-03-2018 IPR000644 CBS domain CHH28_RS08605 28b4b7340de6d4d39c253ff8f4d67765 451 Gene3D G3DSA:3.10.580.10 127 199 3.1E-9 T 29-03-2018 CHH28_RS08605 28b4b7340de6d4d39c253ff8f4d67765 451 SMART SM00116 145 198 8.5 T 29-03-2018 IPR000644 CBS domain CHH28_RS08605 28b4b7340de6d4d39c253ff8f4d67765 451 SMART SM00116 209 257 6.0E-6 T 29-03-2018 IPR000644 CBS domain CHH28_RS08605 28b4b7340de6d4d39c253ff8f4d67765 451 Gene3D G3DSA:1.25.60.10 1 126 4.2E-22 T 29-03-2018 CHH28_RS08605 28b4b7340de6d4d39c253ff8f4d67765 451 SUPERFAMILY SSF161093 280 450 1.24E-45 T 29-03-2018 CHH28_RS08605 28b4b7340de6d4d39c253ff8f4d67765 451 Pfam PF03448 MgtE intracellular N domain 36 136 6.9E-26 T 29-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CHH28_RS08605 28b4b7340de6d4d39c253ff8f4d67765 451 Pfam PF01769 Divalent cation transporter 322 443 2.7E-22 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CHH28_RS08605 28b4b7340de6d4d39c253ff8f4d67765 451 Gene3D G3DSA:1.10.357.20 284 451 1.4E-29 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CHH28_RS08605 28b4b7340de6d4d39c253ff8f4d67765 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 18 449 4.4E-91 T 29-03-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 CHH28_RS08605 28b4b7340de6d4d39c253ff8f4d67765 451 SUPERFAMILY SSF158791 12 135 1.7E-29 T 29-03-2018 CHH28_RS08605 28b4b7340de6d4d39c253ff8f4d67765 451 SMART SM00924 35 138 4.4E-35 T 29-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CHH28_RS08010 a9ebdb87147c51d059ad7d3cab8025cb 333 SUPERFAMILY SSF53335 164 326 9.83E-29 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS08010 a9ebdb87147c51d059ad7d3cab8025cb 333 Pfam PF05175 Methyltransferase small domain 164 328 1.7E-55 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CHH28_RS08010 a9ebdb87147c51d059ad7d3cab8025cb 333 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 261 267 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CHH28_RS08010 a9ebdb87147c51d059ad7d3cab8025cb 333 Pfam PF08468 Methyltransferase small domain N-terminal 6 151 3.8E-24 T 29-03-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS08010 a9ebdb87147c51d059ad7d3cab8025cb 333 Gene3D G3DSA:3.40.50.150 156 333 6.4E-30 T 29-03-2018 CHH28_RS15555 c3fb9130af07c02d0ac8a80b29f08da5 455 Gene3D G3DSA:1.10.40.30 391 445 1.3E-30 T 29-03-2018 CHH28_RS15555 c3fb9130af07c02d0ac8a80b29f08da5 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 9.1E-18 T 29-03-2018 IPR000362 Fumarate lyase family CHH28_RS15555 c3fb9130af07c02d0ac8a80b29f08da5 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 9.1E-18 T 29-03-2018 IPR000362 Fumarate lyase family CHH28_RS15555 c3fb9130af07c02d0ac8a80b29f08da5 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 9.1E-18 T 29-03-2018 IPR000362 Fumarate lyase family CHH28_RS15555 c3fb9130af07c02d0ac8a80b29f08da5 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 9.1E-18 T 29-03-2018 IPR000362 Fumarate lyase family CHH28_RS15555 c3fb9130af07c02d0ac8a80b29f08da5 455 Pfam PF00206 Lyase 14 312 9.9E-68 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal CHH28_RS15555 c3fb9130af07c02d0ac8a80b29f08da5 455 Gene3D G3DSA:1.20.200.10 118 390 3.3E-88 T 29-03-2018 CHH28_RS15555 c3fb9130af07c02d0ac8a80b29f08da5 455 Gene3D G3DSA:1.10.275.10 1 117 5.4E-44 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CHH28_RS15555 c3fb9130af07c02d0ac8a80b29f08da5 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 452 1.6E-135 T 29-03-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CHH28_RS15555 c3fb9130af07c02d0ac8a80b29f08da5 455 SUPERFAMILY SSF48557 10 453 9.42E-110 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CHH28_RS15555 c3fb9130af07c02d0ac8a80b29f08da5 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CHH28_RS15555 c3fb9130af07c02d0ac8a80b29f08da5 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 3.3E-51 T 29-03-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 CHH28_RS14255 d0d50e755f8ebab1893d3c5ffc3792fc 372 SUPERFAMILY SSF52402 8 302 1.04E-54 T 29-03-2018 CHH28_RS14255 d0d50e755f8ebab1893d3c5ffc3792fc 372 Pfam PF03054 tRNA methyl transferase 15 365 3.3E-134 T 29-03-2018 CHH28_RS14255 d0d50e755f8ebab1893d3c5ffc3792fc 372 Gene3D G3DSA:2.40.30.10 289 372 1.0E-27 T 29-03-2018 CHH28_RS14255 d0d50e755f8ebab1893d3c5ffc3792fc 372 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 15 365 3.7E-138 T 29-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CHH28_RS14255 d0d50e755f8ebab1893d3c5ffc3792fc 372 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 14 366 38.653 T 29-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CHH28_RS14255 d0d50e755f8ebab1893d3c5ffc3792fc 372 Gene3D G3DSA:3.40.50.620 7 219 3.4E-64 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS14255 d0d50e755f8ebab1893d3c5ffc3792fc 372 Gene3D G3DSA:2.30.30.280 220 287 7.0E-24 T 29-03-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 CHH28_RS01045 bd4dbd93cc77d77533f39c5b29ded944 113 Pfam PF00576 HIUase/Transthyretin family 5 112 4.1E-39 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CHH28_RS01045 bd4dbd93cc77d77533f39c5b29ded944 113 Gene3D G3DSA:2.60.40.180 3 113 7.5E-43 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CHH28_RS01045 bd4dbd93cc77d77533f39c5b29ded944 113 SMART SM00095 1 112 1.9E-6 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CHH28_RS01045 bd4dbd93cc77d77533f39c5b29ded944 113 PRINTS PR00189 Transthyretin signature 36 61 3.3E-12 T 29-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CHH28_RS01045 bd4dbd93cc77d77533f39c5b29ded944 113 PRINTS PR00189 Transthyretin signature 62 91 3.3E-12 T 29-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CHH28_RS01045 bd4dbd93cc77d77533f39c5b29ded944 113 PRINTS PR00189 Transthyretin signature 4 24 3.3E-12 T 29-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CHH28_RS01045 bd4dbd93cc77d77533f39c5b29ded944 113 ProSitePatterns PS00768 Transthyretin signature 1. 8 23 - T 29-03-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CHH28_RS01045 bd4dbd93cc77d77533f39c5b29ded944 113 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 3 113 2.5E-42 T 29-03-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 CHH28_RS01045 bd4dbd93cc77d77533f39c5b29ded944 113 SUPERFAMILY SSF49472 2 113 4.32E-42 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CHH28_RS08960 ac48daa1d64798752b89e42f959d1d48 264 SMART SM00342 181 263 4.7E-28 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS08960 ac48daa1d64798752b89e42f959d1d48 264 Pfam PF02311 AraC-like ligand binding domain 11 138 5.0E-20 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CHH28_RS08960 ac48daa1d64798752b89e42f959d1d48 264 Gene3D G3DSA:1.10.10.60 224 264 8.0E-11 T 29-03-2018 CHH28_RS08960 ac48daa1d64798752b89e42f959d1d48 264 Gene3D G3DSA:1.10.10.60 131 223 2.1E-13 T 29-03-2018 CHH28_RS08960 ac48daa1d64798752b89e42f959d1d48 264 SUPERFAMILY SSF46689 166 214 1.75E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS08960 ac48daa1d64798752b89e42f959d1d48 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 232 247 1.8E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS08960 ac48daa1d64798752b89e42f959d1d48 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 263 1.8E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS08960 ac48daa1d64798752b89e42f959d1d48 264 SUPERFAMILY SSF51215 9 140 5.49E-19 T 29-03-2018 CHH28_RS08960 ac48daa1d64798752b89e42f959d1d48 264 Pfam PF12833 Helix-turn-helix domain 187 264 2.7E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS08960 ac48daa1d64798752b89e42f959d1d48 264 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 218 259 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CHH28_RS08960 ac48daa1d64798752b89e42f959d1d48 264 Gene3D G3DSA:2.60.120.10 10 130 4.8E-5 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS08960 ac48daa1d64798752b89e42f959d1d48 264 SUPERFAMILY SSF46689 217 264 1.21E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS05035 106fa0611353442f9d935c7e07de0417 609 Pfam PF01425 Amidase 63 450 7.9E-90 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CHH28_RS05035 106fa0611353442f9d935c7e07de0417 609 Gene3D G3DSA:3.10.490.10 475 609 1.1E-28 T 29-03-2018 CHH28_RS05035 106fa0611353442f9d935c7e07de0417 609 SUPERFAMILY SSF75304 5 458 2.09E-107 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CHH28_RS05035 106fa0611353442f9d935c7e07de0417 609 Gene3D G3DSA:3.90.1300.10 5 474 1.7E-109 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CHH28_RS05035 106fa0611353442f9d935c7e07de0417 609 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 52 602 4.6E-241 T 29-03-2018 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 CHH28_RS03260 aaeadf3599bb852d1a793e6f41bbed92 598 Gene3D G3DSA:2.40.440.10 361 531 4.3E-21 T 29-03-2018 CHH28_RS03260 aaeadf3599bb852d1a793e6f41bbed92 598 Pfam PF03734 L,D-transpeptidase catalytic domain 362 533 4.4E-28 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CHH28_RS03260 aaeadf3599bb852d1a793e6f41bbed92 598 Gene3D G3DSA:1.10.101.10 242 336 4.2E-11 T 29-03-2018 IPR002477 Peptidoglycan binding-like CHH28_RS03260 aaeadf3599bb852d1a793e6f41bbed92 598 SUPERFAMILY SSF141523 472 521 5.23E-17 T 29-03-2018 CHH28_RS03260 aaeadf3599bb852d1a793e6f41bbed92 598 SUPERFAMILY SSF141523 359 415 5.23E-17 T 29-03-2018 CHH28_RS03260 aaeadf3599bb852d1a793e6f41bbed92 598 SUPERFAMILY SSF47090 238 273 1.14E-9 T 29-03-2018 IPR002477 Peptidoglycan binding-like CHH28_RS03260 aaeadf3599bb852d1a793e6f41bbed92 598 SUPERFAMILY SSF47090 300 338 1.14E-9 T 29-03-2018 IPR002477 Peptidoglycan binding-like CHH28_RS03260 aaeadf3599bb852d1a793e6f41bbed92 598 Pfam PF01471 Putative peptidoglycan binding domain 255 334 2.5E-6 T 29-03-2018 IPR002477 Peptidoglycan binding-like CHH28_RS17005 33f46f82056d65ef8ba8ede495f790fa 141 SUPERFAMILY SSF52540 21 133 5.1E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS17005 33f46f82056d65ef8ba8ede495f790fa 141 PIRSF PIRSF003093 2 140 3.2E-19 T 29-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CHH28_RS17005 33f46f82056d65ef8ba8ede495f790fa 141 Gene3D G3DSA:3.40.50.300 20 135 9.5E-12 T 29-03-2018 CHH28_RS17005 33f46f82056d65ef8ba8ede495f790fa 141 Pfam PF03846 Cell division inhibitor SulA 11 106 1.4E-15 T 29-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CHH28_RS10415 fd962dffd68750829f60e7e7ec24cbea 470 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CHH28_RS10415 fd962dffd68750829f60e7e7ec24cbea 470 SMART SM00382 99 247 7.6E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS10415 fd962dffd68750829f60e7e7ec24cbea 470 Gene3D G3DSA:3.40.50.300 99 209 2.5E-17 T 29-03-2018 CHH28_RS10415 fd962dffd68750829f60e7e7ec24cbea 470 Pfam PF02978 Signal peptide binding domain 329 428 3.7E-33 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CHH28_RS10415 fd962dffd68750829f60e7e7ec24cbea 470 SMART SM00963 1 86 2.6E-35 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CHH28_RS10415 fd962dffd68750829f60e7e7ec24cbea 470 Gene3D G3DSA:1.10.260.30 328 434 1.6E-36 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CHH28_RS10415 fd962dffd68750829f60e7e7ec24cbea 470 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 430 2.0E-175 T 29-03-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CHH28_RS10415 fd962dffd68750829f60e7e7ec24cbea 470 Gene3D G3DSA:1.20.120.140 1 91 9.9E-29 T 29-03-2018 CHH28_RS10415 fd962dffd68750829f60e7e7ec24cbea 470 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 6.5E-21 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CHH28_RS10415 fd962dffd68750829f60e7e7ec24cbea 470 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 441 33.384 T 29-03-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 CHH28_RS10415 fd962dffd68750829f60e7e7ec24cbea 470 Pfam PF00448 SRP54-type protein, GTPase domain 100 295 2.7E-72 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CHH28_RS10415 fd962dffd68750829f60e7e7ec24cbea 470 SMART SM00962 100 296 4.7E-110 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CHH28_RS10415 fd962dffd68750829f60e7e7ec24cbea 470 Gene3D G3DSA:1.20.120.140 210 310 4.8E-31 T 29-03-2018 CHH28_RS10415 fd962dffd68750829f60e7e7ec24cbea 470 SUPERFAMILY SSF52540 42 352 3.85E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS10415 fd962dffd68750829f60e7e7ec24cbea 470 SUPERFAMILY SSF47446 298 431 1.57E-44 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CHH28_RS01205 79a6150125cd55e3f1549cc4012675e7 197 Pfam PF01323 DSBA-like thioredoxin domain 2 188 1.4E-33 T 29-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 CHH28_RS01205 79a6150125cd55e3f1549cc4012675e7 197 Gene3D G3DSA:3.40.30.10 1 196 1.7E-44 T 29-03-2018 CHH28_RS01205 79a6150125cd55e3f1549cc4012675e7 197 SUPERFAMILY SSF52833 1 191 2.44E-38 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS01205 79a6150125cd55e3f1549cc4012675e7 197 PIRSF PIRSF006386 1 197 2.1E-50 T 29-03-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590 CHH28_RS02745 60784b4a0316972821a5ff10b5c3d0f7 181 Gene3D G3DSA:3.40.430.10 3 180 1.2E-33 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CHH28_RS02745 60784b4a0316972821a5ff10b5c3d0f7 181 SUPERFAMILY SSF53597 4 173 2.75E-30 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CHH28_RS02745 60784b4a0316972821a5ff10b5c3d0f7 181 Pfam PF01872 RibD C-terminal domain 5 174 7.8E-15 T 29-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 62 4.3E-14 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 SMART SM00382 489 656 3.1E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 SMART SM00382 208 352 4.5E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 SUPERFAMILY SSF52540 169 423 1.33E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 SUPERFAMILY SSF52540 439 731 1.23E-76 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 Pfam PF07724 AAA domain (Cdc48 subfamily) 488 649 1.2E-49 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 655 735 2.6E-21 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 Gene3D G3DSA:1.10.8.60 353 439 3.2E-27 T 29-03-2018 CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 SUPERFAMILY SSF81923 1 142 3.92E-60 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 Gene3D G3DSA:1.10.1780.10 1 143 3.7E-26 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 343 5.8E-12 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 493 511 1.5E-38 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 611 1.5E-38 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 1.5E-38 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 582 1.5E-38 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 520 538 - T 29-03-2018 IPR028299 ClpA/B, conserved site 2 CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 Gene3D G3DSA:3.40.50.300 167 352 3.1E-29 T 29-03-2018 CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 735 0.0 T 29-03-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 Gene3D G3DSA:1.10.8.60 655 752 5.3E-20 T 29-03-2018 CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 SMART SM01086 655 744 1.1E-30 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CHH28_RS14285 23e5282957bc8fb50dd2eff26109e2a2 752 Gene3D G3DSA:3.40.50.300 444 654 1.4E-44 T 29-03-2018 CHH28_RS17695 a77144ec441440d706f4b47016b97de5 280 Pfam PF00849 RNA pseudouridylate synthase 66 195 9.4E-15 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS17695 a77144ec441440d706f4b47016b97de5 280 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 230 4.7E-53 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CHH28_RS17695 a77144ec441440d706f4b47016b97de5 280 SUPERFAMILY SSF55120 64 235 8.63E-43 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS17695 a77144ec441440d706f4b47016b97de5 280 Gene3D G3DSA:3.30.70.1560 148 216 4.7E-20 T 29-03-2018 CHH28_RS17695 a77144ec441440d706f4b47016b97de5 280 SMART SM00363 3 59 6.0E-10 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CHH28_RS17695 a77144ec441440d706f4b47016b97de5 280 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CHH28_RS17695 a77144ec441440d706f4b47016b97de5 280 Pfam PF01479 S4 domain 3 48 6.9E-12 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CHH28_RS17695 a77144ec441440d706f4b47016b97de5 280 Gene3D G3DSA:3.30.70.580 60 147 6.6E-19 T 29-03-2018 CHH28_RS17695 a77144ec441440d706f4b47016b97de5 280 SUPERFAMILY SSF55174 3 102 2.35E-16 T 29-03-2018 CHH28_RS17695 a77144ec441440d706f4b47016b97de5 280 Gene3D G3DSA:3.10.290.10 1 59 4.6E-15 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CHH28_RS07790 3752474906e1e5d87ef8bbe6a28ca160 398 Pfam PF07690 Major Facilitator Superfamily 9 350 2.5E-24 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CHH28_RS07790 3752474906e1e5d87ef8bbe6a28ca160 398 Gene3D G3DSA:1.20.1250.20 2 195 3.2E-18 T 29-03-2018 CHH28_RS07790 3752474906e1e5d87ef8bbe6a28ca160 398 SUPERFAMILY SSF103473 6 392 5.36E-37 T 29-03-2018 IPR020846 Major facilitator superfamily domain CHH28_RS07790 3752474906e1e5d87ef8bbe6a28ca160 398 Gene3D G3DSA:1.20.1250.20 196 396 1.1E-15 T 29-03-2018 CHH28_RS04965 297035831474f27ea714d403de1f5e94 253 Gene3D G3DSA:3.40.50.1360 67 243 2.7E-32 T 29-03-2018 CHH28_RS04965 297035831474f27ea714d403de1f5e94 253 SMART SM01134 71 232 1.6E-53 T 29-03-2018 CHH28_RS04965 297035831474f27ea714d403de1f5e94 253 Gene3D G3DSA:1.10.10.10 2 66 9.1E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04965 297035831474f27ea714d403de1f5e94 253 SMART SM00420 8 60 1.7E-16 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CHH28_RS04965 297035831474f27ea714d403de1f5e94 253 SUPERFAMILY SSF46785 6 61 3.94E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04965 297035831474f27ea714d403de1f5e94 253 Pfam PF08220 DeoR-like helix-turn-helix domain 8 60 1.3E-17 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CHH28_RS04965 297035831474f27ea714d403de1f5e94 253 Pfam PF00455 DeoR C terminal sensor domain 75 231 6.2E-42 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CHH28_RS04965 297035831474f27ea714d403de1f5e94 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CHH28_RS04965 297035831474f27ea714d403de1f5e94 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 1.7E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CHH28_RS04965 297035831474f27ea714d403de1f5e94 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 1.7E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CHH28_RS04965 297035831474f27ea714d403de1f5e94 253 SUPERFAMILY SSF100950 74 232 1.47E-29 T 29-03-2018 CHH28_RS03040 292e6f12f9a0b6ac61a95bb0950f5617 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 129 - T 29-03-2018 IPR018336 Ribonuclease PH, conserved site CHH28_RS03040 292e6f12f9a0b6ac61a95bb0950f5617 238 Gene3D G3DSA:3.30.230.70 1 238 2.0E-60 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CHH28_RS03040 292e6f12f9a0b6ac61a95bb0950f5617 238 SUPERFAMILY SSF55666 153 236 8.77E-25 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CHH28_RS03040 292e6f12f9a0b6ac61a95bb0950f5617 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.9E-25 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CHH28_RS03040 292e6f12f9a0b6ac61a95bb0950f5617 238 SUPERFAMILY SSF54211 1 181 2.28E-46 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS03040 292e6f12f9a0b6ac61a95bb0950f5617 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 48.302 T 29-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CHH28_RS03040 292e6f12f9a0b6ac61a95bb0950f5617 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 224 1.8E-10 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CHH28_RS03040 292e6f12f9a0b6ac61a95bb0950f5617 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 9.3E-117 T 29-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CHH28_RS06940 6dc96e66e3f031172aca62b9ba88327d 291 Pfam PF00753 Metallo-beta-lactamase superfamily 66 257 4.4E-26 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS06940 6dc96e66e3f031172aca62b9ba88327d 291 Gene3D G3DSA:3.60.15.10 28 276 1.7E-37 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS06940 6dc96e66e3f031172aca62b9ba88327d 291 SUPERFAMILY SSF56281 33 273 1.97E-32 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS06940 6dc96e66e3f031172aca62b9ba88327d 291 SMART SM00849 66 270 1.9E-20 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS03100 dbe0c194b144658a1547c3b80689e7cc 568 Pfam PF00563 EAL domain 317 554 2.2E-77 T 29-03-2018 IPR001633 EAL domain CHH28_RS03100 dbe0c194b144658a1547c3b80689e7cc 568 Gene3D G3DSA:3.30.70.270 137 304 1.5E-51 T 29-03-2018 CHH28_RS03100 dbe0c194b144658a1547c3b80689e7cc 568 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 136 300 6.8E-37 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS03100 dbe0c194b144658a1547c3b80689e7cc 568 Pfam PF00990 Diguanylate cyclase, GGDEF domain 140 297 2.1E-42 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS03100 dbe0c194b144658a1547c3b80689e7cc 568 SMART SM00267 129 301 1.3E-47 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS03100 dbe0c194b144658a1547c3b80689e7cc 568 SMART SM00052 311 559 2.2E-116 T 29-03-2018 IPR001633 EAL domain CHH28_RS03100 dbe0c194b144658a1547c3b80689e7cc 568 SUPERFAMILY SSF141868 316 565 2.75E-92 T 29-03-2018 IPR001633 EAL domain CHH28_RS03100 dbe0c194b144658a1547c3b80689e7cc 568 SUPERFAMILY SSF55073 145 303 5.34E-44 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS03100 dbe0c194b144658a1547c3b80689e7cc 568 Gene3D G3DSA:3.20.20.450 308 568 8.4E-98 T 29-03-2018 IPR001633 EAL domain CHH28_RS03100 dbe0c194b144658a1547c3b80689e7cc 568 Gene3D G3DSA:3.40.50.2300 62 136 0.13 T 29-03-2018 CHH28_RS09280 030b553a083b5968e14537c3e73b6644 545 Pfam PF00005 ABC transporter 371 495 5.9E-15 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS09280 030b553a083b5968e14537c3e73b6644 545 Pfam PF00005 ABC transporter 50 194 5.4E-10 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS09280 030b553a083b5968e14537c3e73b6644 545 SUPERFAMILY SSF52540 35 239 6.15E-28 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09280 030b553a083b5968e14537c3e73b6644 545 Gene3D G3DSA:3.40.50.300 24 286 2.6E-32 T 29-03-2018 CHH28_RS09280 030b553a083b5968e14537c3e73b6644 545 Gene3D G3DSA:3.40.50.300 287 541 1.1E-31 T 29-03-2018 CHH28_RS09280 030b553a083b5968e14537c3e73b6644 545 SUPERFAMILY SSF52540 371 529 1.16E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09280 030b553a083b5968e14537c3e73b6644 545 SMART SM00382 48 246 4.5E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS09280 030b553a083b5968e14537c3e73b6644 545 SMART SM00382 377 543 1.9E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS06660 dee8685dbf218cddb1ed22b79f522081 318 Gene3D G3DSA:1.10.10.10 7 94 1.9E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS06660 dee8685dbf218cddb1ed22b79f522081 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 3.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS06660 dee8685dbf218cddb1ed22b79f522081 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 3.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS06660 dee8685dbf218cddb1ed22b79f522081 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 3.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS06660 dee8685dbf218cddb1ed22b79f522081 318 Pfam PF03466 LysR substrate binding domain 98 303 1.2E-50 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS06660 dee8685dbf218cddb1ed22b79f522081 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 73 1.0E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS06660 dee8685dbf218cddb1ed22b79f522081 318 SUPERFAMILY SSF53850 99 306 7.42E-47 T 29-03-2018 CHH28_RS06660 dee8685dbf218cddb1ed22b79f522081 318 SUPERFAMILY SSF46785 10 93 1.9E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS06660 dee8685dbf218cddb1ed22b79f522081 318 Gene3D G3DSA:3.40.190.10 98 185 2.6E-18 T 29-03-2018 CHH28_RS06660 dee8685dbf218cddb1ed22b79f522081 318 Gene3D G3DSA:3.40.190.10 186 275 2.3E-23 T 29-03-2018 CHH28_RS03915 c720daf2b23d9d93609d73f8bf48f2a0 308 Gene3D G3DSA:1.10.10.10 1 86 3.2E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS03915 c720daf2b23d9d93609d73f8bf48f2a0 308 Pfam PF03466 LysR substrate binding domain 95 300 4.2E-16 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS03915 c720daf2b23d9d93609d73f8bf48f2a0 308 SUPERFAMILY SSF53850 90 297 8.32E-36 T 29-03-2018 CHH28_RS03915 c720daf2b23d9d93609d73f8bf48f2a0 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 4.4E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS03915 c720daf2b23d9d93609d73f8bf48f2a0 308 Gene3D G3DSA:3.40.190.10 93 181 2.8E-10 T 29-03-2018 CHH28_RS03915 c720daf2b23d9d93609d73f8bf48f2a0 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.6E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS03915 c720daf2b23d9d93609d73f8bf48f2a0 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.6E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS03915 c720daf2b23d9d93609d73f8bf48f2a0 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.6E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS03915 c720daf2b23d9d93609d73f8bf48f2a0 308 Gene3D G3DSA:3.40.190.10 182 272 4.6E-10 T 29-03-2018 CHH28_RS03915 c720daf2b23d9d93609d73f8bf48f2a0 308 SUPERFAMILY SSF46785 3 84 5.79E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS09860 cfeff4e6df9cb1ccfc0a66fa8e3e50e1 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CHH28_RS09860 cfeff4e6df9cb1ccfc0a66fa8e3e50e1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 1.1E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS09860 cfeff4e6df9cb1ccfc0a66fa8e3e50e1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.1E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS09860 cfeff4e6df9cb1ccfc0a66fa8e3e50e1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 1.1E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS09860 cfeff4e6df9cb1ccfc0a66fa8e3e50e1 252 SUPERFAMILY SSF51735 4 250 5.18E-74 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS09860 cfeff4e6df9cb1ccfc0a66fa8e3e50e1 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 250 2.0E-59 T 29-03-2018 CHH28_RS09860 cfeff4e6df9cb1ccfc0a66fa8e3e50e1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 7.0E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS09860 cfeff4e6df9cb1ccfc0a66fa8e3e50e1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 7.0E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS09860 cfeff4e6df9cb1ccfc0a66fa8e3e50e1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.0E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS09860 cfeff4e6df9cb1ccfc0a66fa8e3e50e1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.0E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS09860 cfeff4e6df9cb1ccfc0a66fa8e3e50e1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 7.0E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS09860 cfeff4e6df9cb1ccfc0a66fa8e3e50e1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 7.0E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS09860 cfeff4e6df9cb1ccfc0a66fa8e3e50e1 252 Gene3D G3DSA:3.40.50.720 45 252 1.4E-60 T 29-03-2018 CHH28_RS09860 cfeff4e6df9cb1ccfc0a66fa8e3e50e1 252 Gene3D G3DSA:3.40.50.720 1 44 1.8E-8 T 29-03-2018 CHH28_RS09860 cfeff4e6df9cb1ccfc0a66fa8e3e50e1 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 4.0E-5 T 29-03-2018 CHH28_RS02515 f22b17c790c9b6fa8b829407b2639cbf 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 2.2E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS02515 f22b17c790c9b6fa8b829407b2639cbf 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 421 2.2E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS02515 f22b17c790c9b6fa8b829407b2639cbf 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 461 2.2E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS02515 f22b17c790c9b6fa8b829407b2639cbf 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 2.2E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS02515 f22b17c790c9b6fa8b829407b2639cbf 469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 463 6.0E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS02515 f22b17c790c9b6fa8b829407b2639cbf 469 Gene3D G3DSA:3.30.450.40 25 187 1.0E-4 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS02515 f22b17c790c9b6fa8b829407b2639cbf 469 Gene3D G3DSA:1.10.287.130 188 308 1.1E-8 T 29-03-2018 CHH28_RS02515 f22b17c790c9b6fa8b829407b2639cbf 469 SUPERFAMILY SSF55874 303 464 1.96E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS02515 f22b17c790c9b6fa8b829407b2639cbf 469 SMART SM00387 352 464 8.6E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS02515 f22b17c790c9b6fa8b829407b2639cbf 469 Gene3D G3DSA:3.30.565.10 314 468 2.1E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS02515 f22b17c790c9b6fa8b829407b2639cbf 469 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 311 3.6E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS08490 6ea207ee50de2b8f382a99fa32239a88 406 Pfam PF00144 Beta-lactamase 87 372 1.1E-29 T 29-03-2018 IPR001466 Beta-lactamase-related CHH28_RS08490 6ea207ee50de2b8f382a99fa32239a88 406 SUPERFAMILY SSF56601 20 394 1.1E-81 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS08490 6ea207ee50de2b8f382a99fa32239a88 406 Gene3D G3DSA:3.40.710.10 84 402 1.7E-43 T 29-03-2018 CHH28_RS15630 08df9a4cde4db84e9165efb8dd55ef02 945 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 796 941 1.3E-52 T 29-03-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CHH28_RS15630 08df9a4cde4db84e9165efb8dd55ef02 945 SUPERFAMILY SSF52518 581 799 4.22E-53 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CHH28_RS15630 08df9a4cde4db84e9165efb8dd55ef02 945 SUPERFAMILY SSF52518 125 551 5.3E-83 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CHH28_RS15630 08df9a4cde4db84e9165efb8dd55ef02 945 SMART SM00861 599 792 1.3E-61 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CHH28_RS15630 08df9a4cde4db84e9165efb8dd55ef02 945 Gene3D G3DSA:1.10.287.1150 88 171 1.8E-26 T 29-03-2018 CHH28_RS15630 08df9a4cde4db84e9165efb8dd55ef02 945 Pfam PF00676 Dehydrogenase E1 component 232 521 2.1E-54 T 29-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 CHH28_RS15630 08df9a4cde4db84e9165efb8dd55ef02 945 Gene3D G3DSA:3.40.50.970 598 808 3.4E-56 T 29-03-2018 CHH28_RS15630 08df9a4cde4db84e9165efb8dd55ef02 945 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 941 0.0 T 29-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CHH28_RS15630 08df9a4cde4db84e9165efb8dd55ef02 945 Gene3D G3DSA:3.40.50.970 172 530 9.2E-90 T 29-03-2018 CHH28_RS15630 08df9a4cde4db84e9165efb8dd55ef02 945 Pfam PF02779 Transketolase, pyrimidine binding domain 599 793 7.9E-66 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CHH28_RS15630 08df9a4cde4db84e9165efb8dd55ef02 945 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 9.5E-16 T 29-03-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CHH28_RS15630 08df9a4cde4db84e9165efb8dd55ef02 945 PIRSF PIRSF000157 1 943 0.0 T 29-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 SUPERFAMILY SSF47384 343 402 3.84E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 ProSitePatterns PS00018 EF-hand calcium-binding domain. 205 217 - T 29-03-2018 IPR018247 EF-Hand 1, calcium-binding site CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 Pfam PF01584 CheW-like domain 595 723 6.3E-25 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 SMART SM00260 581 721 1.6E-37 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 Gene3D G3DSA:2.30.30.40 674 721 8.0E-22 T 29-03-2018 CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 SUPERFAMILY SSF50341 588 721 1.18E-31 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 SUPERFAMILY SSF47226 6 128 1.1E-32 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 SMART SM00387 446 589 3.7E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 567 5.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 543 5.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 586 5.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 505 5.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 SMART SM01231 341 401 9.5E-18 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 449 588 1.1E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 SUPERFAMILY SSF55874 404 587 5.11E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 SMART SM00073 6 103 3.5E-22 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 Gene3D G3DSA:1.10.287.560 341 402 3.1E-17 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 342 401 8.5E-14 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 Gene3D G3DSA:1.20.120.160 2 146 4.5E-37 T 29-03-2018 CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 Gene3D G3DSA:1.10.1330.10 162 230 0.0019 T 29-03-2018 CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 Gene3D G3DSA:3.30.565.10 404 590 8.7E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 Pfam PF01627 Hpt domain 8 100 1.2E-18 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS18680 c0f83a88e75d4463636c4838cfccce09 732 Gene3D G3DSA:2.40.50.180 606 673 4.3E-12 T 29-03-2018 CHH28_RS05695 c89e669004452b017fd3afb406829e75 368 Gene3D G3DSA:2.40.50.100 177 365 1.8E-4 T 29-03-2018 CHH28_RS05695 c89e669004452b017fd3afb406829e75 368 Pfam PF13437 HlyD family secretion protein 187 296 7.3E-6 T 29-03-2018 CHH28_RS05695 c89e669004452b017fd3afb406829e75 368 Gene3D G3DSA:2.40.50.100 71 146 2.3E-8 T 29-03-2018 CHH28_RS05695 c89e669004452b017fd3afb406829e75 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 344 3.2E-32 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CHH28_RS05695 c89e669004452b017fd3afb406829e75 368 SUPERFAMILY SSF111369 65 304 2.09E-15 T 29-03-2018 CHH28_RS05695 c89e669004452b017fd3afb406829e75 368 Pfam PF13533 Biotin-lipoyl like 73 121 4.5E-5 T 29-03-2018 CHH28_RS08820 9432fbe65a1c069aef3e36d6c9dede5c 391 Gene3D G3DSA:3.40.50.1820 90 369 3.4E-52 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS08820 9432fbe65a1c069aef3e36d6c9dede5c 391 Pfam PF00561 alpha/beta hydrolase fold 111 357 2.4E-29 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS08820 9432fbe65a1c069aef3e36d6c9dede5c 391 SUPERFAMILY SSF53474 96 370 4.5E-68 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS08820 9432fbe65a1c069aef3e36d6c9dede5c 391 PRINTS PR00412 Epoxide hydrolase signature 137 152 3.3E-23 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CHH28_RS08820 9432fbe65a1c069aef3e36d6c9dede5c 391 PRINTS PR00412 Epoxide hydrolase signature 117 135 3.3E-23 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CHH28_RS08820 9432fbe65a1c069aef3e36d6c9dede5c 391 PRINTS PR00412 Epoxide hydrolase signature 312 328 3.3E-23 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CHH28_RS08820 9432fbe65a1c069aef3e36d6c9dede5c 391 PRINTS PR00412 Epoxide hydrolase signature 345 367 3.3E-23 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CHH28_RS08820 9432fbe65a1c069aef3e36d6c9dede5c 391 PRINTS PR00412 Epoxide hydrolase signature 183 196 3.3E-23 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CHH28_RS08820 9432fbe65a1c069aef3e36d6c9dede5c 391 PRINTS PR00111 Alpha/beta hydrolase fold signature 314 328 4.1E-10 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS08820 9432fbe65a1c069aef3e36d6c9dede5c 391 PRINTS PR00111 Alpha/beta hydrolase fold signature 183 196 4.1E-10 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS08820 9432fbe65a1c069aef3e36d6c9dede5c 391 PRINTS PR00111 Alpha/beta hydrolase fold signature 137 152 4.1E-10 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS15825 1f0d4fe5f4ec4ea7cd61acd11f4853b1 442 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 419 7.2E-136 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CHH28_RS15825 1f0d4fe5f4ec4ea7cd61acd11f4853b1 442 Pfam PF05525 Branched-chain amino acid transport protein 7 432 6.9E-150 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CHH28_RS07105 32752347538e18baf9391f237adee33a 149 Gene3D G3DSA:1.10.287.900 2 34 8.1E-11 T 29-03-2018 IPR027455 Spermine/spermidine acetyltransferase, N-terminal domain KEGG: 00330+2.3.1.57|MetaCyc: PWY-0|MetaCyc: PWY-6117 CHH28_RS07105 32752347538e18baf9391f237adee33a 149 Gene3D G3DSA:3.40.630.30 35 138 3.1E-14 T 29-03-2018 CHH28_RS07105 32752347538e18baf9391f237adee33a 149 Pfam PF00583 Acetyltransferase (GNAT) family 40 131 5.8E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS07105 32752347538e18baf9391f237adee33a 149 SUPERFAMILY SSF55729 1 139 9.76E-21 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS03625 9323fe1fa99ac99ee98e84cdd8ba5662 242 SUPERFAMILY SSF55486 26 228 7.32E-40 T 29-03-2018 CHH28_RS03625 9323fe1fa99ac99ee98e84cdd8ba5662 242 Pfam PF06167 Glucose-regulated metallo-peptidase M90 5 227 8.5E-59 T 29-03-2018 IPR010384 MtfA family CHH28_RS03625 9323fe1fa99ac99ee98e84cdd8ba5662 242 Gene3D G3DSA:3.40.390.10 74 232 1.4E-24 T 29-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CHH28_RS06975 ad459031ef91ae8d308df06682ecc39a 140 SUPERFAMILY SSF54593 3 132 1.93E-25 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS06975 ad459031ef91ae8d308df06682ecc39a 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 6.6E-9 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CHH28_RS06975 ad459031ef91ae8d308df06682ecc39a 140 Gene3D G3DSA:3.10.180.10 3 131 1.4E-23 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS11030 a83e23e2acf76dab4f44a6764d6953f5 230 Gene3D G3DSA:1.10.3720.10 3 227 9.1E-39 T 29-03-2018 CHH28_RS11030 a83e23e2acf76dab4f44a6764d6953f5 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 9 115 2.1E-18 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CHH28_RS11030 a83e23e2acf76dab4f44a6764d6953f5 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 219 1.7E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS11030 a83e23e2acf76dab4f44a6764d6953f5 230 SUPERFAMILY SSF161098 9 207 6.41E-40 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS08245 99d339822baacb0c6e85d5c4329769a5 423 SUPERFAMILY SSF51905 388 419 1.61E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS08245 99d339822baacb0c6e85d5c4329769a5 423 SUPERFAMILY SSF51905 5 304 1.61E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS08245 99d339822baacb0c6e85d5c4329769a5 423 Pfam PF01593 Flavin containing amine oxidoreductase 13 288 1.0E-23 T 29-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CHH28_RS08245 99d339822baacb0c6e85d5c4329769a5 423 Gene3D G3DSA:3.40.50.720 1 42 5.2E-7 T 29-03-2018 CHH28_RS08245 99d339822baacb0c6e85d5c4329769a5 423 Gene3D G3DSA:3.90.660.20 43 407 2.9E-31 T 29-03-2018 CHH28_RS01710 dc6b1f63a71b0466d8774a13a681ffa8 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CHH28_RS01710 dc6b1f63a71b0466d8774a13a681ffa8 409 Gene3D G3DSA:3.40.50.720 137 295 2.3E-42 T 29-03-2018 CHH28_RS01710 dc6b1f63a71b0466d8774a13a681ffa8 409 SUPERFAMILY SSF51735 108 295 7.62E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS01710 dc6b1f63a71b0466d8774a13a681ffa8 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CHH28_RS01710 dc6b1f63a71b0466d8774a13a681ffa8 409 SUPERFAMILY SSF52283 7 135 6.24E-51 T 29-03-2018 CHH28_RS01710 dc6b1f63a71b0466d8774a13a681ffa8 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 1.5E-37 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CHH28_RS01710 dc6b1f63a71b0466d8774a13a681ffa8 409 SUPERFAMILY SSF55021 333 408 3.44E-17 T 29-03-2018 CHH28_RS01710 dc6b1f63a71b0466d8774a13a681ffa8 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 1.1E-53 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CHH28_RS01710 dc6b1f63a71b0466d8774a13a681ffa8 409 Gene3D G3DSA:3.30.70.260 328 408 7.6E-15 T 29-03-2018 CHH28_RS01710 dc6b1f63a71b0466d8774a13a681ffa8 409 Gene3D G3DSA:3.40.50.720 1 136 2.8E-46 T 29-03-2018 CHH28_RS01710 dc6b1f63a71b0466d8774a13a681ffa8 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CHH28_RS17905 65923814f461570624f807d72d224365 194 Pfam PF13580 SIS domain 11 144 2.9E-36 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CHH28_RS17905 65923814f461570624f807d72d224365 194 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 36.736 T 29-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 CHH28_RS17905 65923814f461570624f807d72d224365 194 SUPERFAMILY SSF53697 2 191 7.89E-57 T 29-03-2018 CHH28_RS17905 65923814f461570624f807d72d224365 194 Gene3D G3DSA:3.40.50.10490 1 192 5.6E-38 T 29-03-2018 CHH28_RS16465 9a4c44cd4bdd94167a5e555d9785e1b4 557 Pfam PF12158 Protein of unknown function (DUF3592) 10 210 2.2E-20 T 29-03-2018 IPR021994 Protein of unknown function DUF3592 CHH28_RS13580 a0ddef7cdf3d6bd61784796f3b606271 152 Gene3D G3DSA:1.10.10.10 1 55 1.0E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS13580 a0ddef7cdf3d6bd61784796f3b606271 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 1.6E-19 T 29-03-2018 CHH28_RS13580 a0ddef7cdf3d6bd61784796f3b606271 152 SUPERFAMILY SSF54909 64 152 2.15E-21 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CHH28_RS13580 a0ddef7cdf3d6bd61784796f3b606271 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 2.3E-15 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS13580 a0ddef7cdf3d6bd61784796f3b606271 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 2.3E-15 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS13580 a0ddef7cdf3d6bd61784796f3b606271 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 2.3E-15 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS13580 a0ddef7cdf3d6bd61784796f3b606271 152 SMART SM00344 4 113 9.2E-37 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CHH28_RS13580 a0ddef7cdf3d6bd61784796f3b606271 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CHH28_RS13580 a0ddef7cdf3d6bd61784796f3b606271 152 Gene3D G3DSA:3.30.70.920 57 147 1.5E-24 T 29-03-2018 CHH28_RS13580 a0ddef7cdf3d6bd61784796f3b606271 152 Pfam PF01037 Lrp/AsnC ligand binding domain 70 142 4.3E-20 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CHH28_RS13580 a0ddef7cdf3d6bd61784796f3b606271 152 SUPERFAMILY SSF46785 3 92 4.0E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS12160 4266252d1f975cf55f90bfd9069b462d 189 SMART SM00867 21 186 5.8E-7 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CHH28_RS12160 4266252d1f975cf55f90bfd9069b462d 189 PIRSF PIRSF029811 1 188 1.6E-53 T 29-03-2018 IPR027016 Uncharacterised protein with YceI domain CHH28_RS12160 4266252d1f975cf55f90bfd9069b462d 189 SUPERFAMILY SSF101874 21 187 1.57E-16 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CHH28_RS12160 4266252d1f975cf55f90bfd9069b462d 189 Gene3D G3DSA:2.40.128.110 17 188 3.5E-21 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CHH28_RS12160 4266252d1f975cf55f90bfd9069b462d 189 Pfam PF04264 YceI-like domain 30 185 8.9E-9 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CHH28_RS13540 49ccf7ef4ed1061cd23de0d968d9e08f 223 SUPERFAMILY SSF48008 81 214 1.15E-5 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CHH28_RS13540 49ccf7ef4ed1061cd23de0d968d9e08f 223 Gene3D G3DSA:1.10.10.10 2 73 4.0E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS13540 49ccf7ef4ed1061cd23de0d968d9e08f 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 1.0E-14 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS13540 49ccf7ef4ed1061cd23de0d968d9e08f 223 Gene3D G3DSA:1.20.120.530 74 223 4.1E-16 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CHH28_RS13540 49ccf7ef4ed1061cd23de0d968d9e08f 223 SUPERFAMILY SSF46785 2 75 1.18E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS13540 49ccf7ef4ed1061cd23de0d968d9e08f 223 SMART SM00345 13 71 6.8E-14 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS13540 49ccf7ef4ed1061cd23de0d968d9e08f 223 Pfam PF07729 FCD domain 82 199 1.5E-9 T 29-03-2018 IPR011711 GntR, C-terminal CHH28_RS06585 9b6ca1be9dce0f00b9319c80e47855c5 730 Gene3D G3DSA:3.40.50.300 193 357 1.4E-29 T 29-03-2018 CHH28_RS06585 9b6ca1be9dce0f00b9319c80e47855c5 730 Gene3D G3DSA:3.40.50.300 395 610 6.1E-22 T 29-03-2018 CHH28_RS06585 9b6ca1be9dce0f00b9319c80e47855c5 730 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 729 23.464 T 29-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CHH28_RS06585 9b6ca1be9dce0f00b9319c80e47855c5 730 TIGRFAM TIGR00595 priA: primosomal protein N' 216 727 4.5E-174 T 29-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CHH28_RS06585 9b6ca1be9dce0f00b9319c80e47855c5 730 SUPERFAMILY SSF52540 498 593 9.61E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS06585 9b6ca1be9dce0f00b9319c80e47855c5 730 SUPERFAMILY SSF52540 211 435 9.61E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS06585 9b6ca1be9dce0f00b9319c80e47855c5 730 Pfam PF00270 DEAD/DEAH box helicase 200 358 3.1E-14 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CHH28_RS06585 9b6ca1be9dce0f00b9319c80e47855c5 730 SMART SM00490 487 584 1.6E-7 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS06585 9b6ca1be9dce0f00b9319c80e47855c5 730 SMART SM00487 192 387 1.4E-19 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CHH28_RS11665 9000eb572d8a2c3d5966031ff6bd9ffb 156 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11665 9000eb572d8a2c3d5966031ff6bd9ffb 156 PIRSF PIRSF002560 1 156 3.6E-64 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11665 9000eb572d8a2c3d5966031ff6bd9ffb 156 SUPERFAMILY SSF47240 1 154 5.49E-45 T 29-03-2018 IPR009078 Ferritin-like superfamily CHH28_RS11665 9000eb572d8a2c3d5966031ff6bd9ffb 156 TIGRFAM TIGR00754 bfr: bacterioferritin 1 156 5.5E-67 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11665 9000eb572d8a2c3d5966031ff6bd9ffb 156 PRINTS PR00601 Bacterioferritin signature 44 64 4.6E-59 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11665 9000eb572d8a2c3d5966031ff6bd9ffb 156 PRINTS PR00601 Bacterioferritin signature 86 106 4.6E-59 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11665 9000eb572d8a2c3d5966031ff6bd9ffb 156 PRINTS PR00601 Bacterioferritin signature 107 127 4.6E-59 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11665 9000eb572d8a2c3d5966031ff6bd9ffb 156 PRINTS PR00601 Bacterioferritin signature 23 43 4.6E-59 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11665 9000eb572d8a2c3d5966031ff6bd9ffb 156 PRINTS PR00601 Bacterioferritin signature 3 22 4.6E-59 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11665 9000eb572d8a2c3d5966031ff6bd9ffb 156 PRINTS PR00601 Bacterioferritin signature 65 85 4.6E-59 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11665 9000eb572d8a2c3d5966031ff6bd9ffb 156 PRINTS PR00601 Bacterioferritin signature 128 149 4.6E-59 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11665 9000eb572d8a2c3d5966031ff6bd9ffb 156 Gene3D G3DSA:1.20.1260.10 2 150 9.4E-34 T 29-03-2018 IPR012347 Ferritin-related CHH28_RS11665 9000eb572d8a2c3d5966031ff6bd9ffb 156 Pfam PF00210 Ferritin-like domain 8 142 1.8E-32 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CHH28_RS14820 aee8173a45f099722b7540a9f5cab3a9 446 Pfam PF01618 MotA/TolQ/ExbB proton channel family 311 429 2.2E-31 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CHH28_RS14820 aee8173a45f099722b7540a9f5cab3a9 446 Gene3D G3DSA:1.20.1170.10 19 380 6.1E-4 T 29-03-2018 CHH28_RS14820 aee8173a45f099722b7540a9f5cab3a9 446 PIRSF PIRSF037714 1 445 3.3E-151 T 29-03-2018 IPR017270 Putative MotA/TolQ/ExbB family protein CHH28_RS06350 1472b5609f8bbc1849a217d5d5578179 388 Gene3D G3DSA:3.40.190.10 9 360 1.9E-4 T 29-03-2018 CHH28_RS06350 1472b5609f8bbc1849a217d5d5578179 388 Pfam PF14064 HmuY protein 70 206 4.4E-14 T 29-03-2018 IPR025921 HmuY protein CHH28_RS17795 b09751b4e0b4377a5d49adb5ffa36339 310 Gene3D G3DSA:1.10.8.10 15 102 1.5E-16 T 29-03-2018 CHH28_RS17795 b09751b4e0b4377a5d49adb5ffa36339 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 206 212 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CHH28_RS17795 b09751b4e0b4377a5d49adb5ffa36339 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 14 296 3.9E-121 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CHH28_RS17795 b09751b4e0b4377a5d49adb5ffa36339 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 7 302 49.21 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CHH28_RS17795 b09751b4e0b4377a5d49adb5ffa36339 310 Gene3D G3DSA:3.40.50.150 103 279 3.6E-33 T 29-03-2018 CHH28_RS17795 b09751b4e0b4377a5d49adb5ffa36339 310 Pfam PF05175 Methyltransferase small domain 136 215 7.6E-17 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CHH28_RS17795 b09751b4e0b4377a5d49adb5ffa36339 310 PIRSF PIRSF037167 1 309 4.5E-127 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CHH28_RS17795 b09751b4e0b4377a5d49adb5ffa36339 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 16 297 5.5E-81 T 29-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CHH28_RS17795 b09751b4e0b4377a5d49adb5ffa36339 310 SUPERFAMILY SSF53335 17 294 7.32E-51 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS11725 dce581a4c4c4af378d92a2c53ebc94be 77 SUPERFAMILY SSF50037 6 75 3.66E-16 T 29-03-2018 IPR008988 Transcriptional repressor, C-terminal CHH28_RS11725 dce581a4c4c4af378d92a2c53ebc94be 77 Gene3D G3DSA:2.30.30.90 1 76 1.0E-17 T 29-03-2018 CHH28_RS11725 dce581a4c4c4af378d92a2c53ebc94be 77 Pfam PF04023 FeoA domain 2 74 8.5E-17 T 29-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CHH28_RS11725 dce581a4c4c4af378d92a2c53ebc94be 77 SMART SM00899 2 75 3.5E-20 T 29-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CHH28_RS05485 7db5580fb215164a29f9cc8258557da1 185 Pfam PF02622 Uncharacterized ACR, COG1678 16 172 5.9E-45 T 29-03-2018 IPR003774 Protein of unknown function UPF0301 CHH28_RS05485 7db5580fb215164a29f9cc8258557da1 185 SUPERFAMILY SSF143456 6 185 7.33E-59 T 29-03-2018 CHH28_RS05485 7db5580fb215164a29f9cc8258557da1 185 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 5 185 32.41 T 29-03-2018 IPR003774 Protein of unknown function UPF0301 CHH28_RS05485 7db5580fb215164a29f9cc8258557da1 185 Gene3D G3DSA:3.40.1740.10 107 177 6.1E-11 T 29-03-2018 CHH28_RS05485 7db5580fb215164a29f9cc8258557da1 185 Gene3D G3DSA:3.40.1740.10 1 93 8.0E-23 T 29-03-2018 CHH28_RS05465 a0889ff6220b63899d8cb5dc3104c512 420 SUPERFAMILY SSF51556 54 359 5.19E-71 T 29-03-2018 IPR032466 Metal-dependent hydrolase CHH28_RS05465 a0889ff6220b63899d8cb5dc3104c512 420 Pfam PF01979 Amidohydrolase family 51 380 1.8E-6 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CHH28_RS05465 a0889ff6220b63899d8cb5dc3104c512 420 SUPERFAMILY SSF51338 1 53 3.73E-19 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS05465 a0889ff6220b63899d8cb5dc3104c512 420 SUPERFAMILY SSF51338 362 418 3.73E-19 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS05465 a0889ff6220b63899d8cb5dc3104c512 420 Gene3D G3DSA:2.30.40.10 347 420 1.7E-5 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS05465 a0889ff6220b63899d8cb5dc3104c512 420 Gene3D G3DSA:2.30.40.10 1 68 1.2E-16 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS05465 a0889ff6220b63899d8cb5dc3104c512 420 Gene3D G3DSA:3.20.20.140 69 346 4.6E-60 T 29-03-2018 CHH28_RS03225 0e11b850e0c219d9e958ac6d32107381 924 Gene3D G3DSA:3.20.20.450 665 920 6.4E-92 T 29-03-2018 IPR001633 EAL domain CHH28_RS03225 0e11b850e0c219d9e958ac6d32107381 924 SUPERFAMILY SSF55785 366 488 6.13E-20 T 29-03-2018 IPR000014 PAS domain CHH28_RS03225 0e11b850e0c219d9e958ac6d32107381 924 SMART SM00052 672 917 4.3E-104 T 29-03-2018 IPR001633 EAL domain CHH28_RS03225 0e11b850e0c219d9e958ac6d32107381 924 SUPERFAMILY SSF141868 677 922 6.02E-82 T 29-03-2018 IPR001633 EAL domain CHH28_RS03225 0e11b850e0c219d9e958ac6d32107381 924 SMART SM00267 490 662 2.6E-71 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS03225 0e11b850e0c219d9e958ac6d32107381 924 Gene3D G3DSA:3.30.450.20 359 498 4.9E-23 T 29-03-2018 CHH28_RS03225 0e11b850e0c219d9e958ac6d32107381 924 Pfam PF00563 EAL domain 678 912 3.4E-68 T 29-03-2018 IPR001633 EAL domain CHH28_RS03225 0e11b850e0c219d9e958ac6d32107381 924 SMART SM00091 376 442 2.8E-6 T 29-03-2018 IPR000014 PAS domain CHH28_RS03225 0e11b850e0c219d9e958ac6d32107381 924 Pfam PF00990 Diguanylate cyclase, GGDEF domain 501 658 1.2E-54 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS03225 0e11b850e0c219d9e958ac6d32107381 924 Pfam PF08448 PAS fold 382 491 1.8E-20 T 29-03-2018 IPR013656 PAS fold-4 CHH28_RS03225 0e11b850e0c219d9e958ac6d32107381 924 Gene3D G3DSA:3.30.70.270 499 664 1.6E-63 T 29-03-2018 CHH28_RS03225 0e11b850e0c219d9e958ac6d32107381 924 SUPERFAMILY SSF55073 506 663 3.14E-52 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS03225 0e11b850e0c219d9e958ac6d32107381 924 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 374 497 1.8E-13 T 29-03-2018 IPR000014 PAS domain CHH28_RS03225 0e11b850e0c219d9e958ac6d32107381 924 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 497 661 1.9E-49 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS19640 94880991636ae25971c64bf92d203af1 234 SUPERFAMILY SSF46689 25 92 2.1E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS19640 94880991636ae25971c64bf92d203af1 234 SUPERFAMILY SSF48498 143 230 9.93E-6 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CHH28_RS19640 94880991636ae25971c64bf92d203af1 234 Gene3D G3DSA:1.10.357.10 16 233 2.3E-19 T 29-03-2018 CHH28_RS19640 94880991636ae25971c64bf92d203af1 234 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 78 1.1E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS11595 d35f24ebca5b619f9a5dab402d48a683 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 5.1E-32 T 29-03-2018 IPR019886 Sodium symporter small subunit, predicted CHH28_RS11595 d35f24ebca5b619f9a5dab402d48a683 88 Pfam PF13937 Domain of unknown function (DUF4212) 10 86 1.7E-31 T 29-03-2018 IPR019886 Sodium symporter small subunit, predicted CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 Gene3D G3DSA:3.30.565.10 605 771 1.8E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 SUPERFAMILY SSF55874 590 759 6.81E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 Pfam PF00072 Response regulator receiver domain 909 1026 5.0E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 Gene3D G3DSA:3.40.50.2300 894 1030 5.9E-37 T 29-03-2018 CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 SUPERFAMILY SSF55785 353 494 8.72E-13 T 29-03-2018 IPR000014 PAS domain CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 Gene3D G3DSA:1.10.287.130 526 597 4.3E-16 T 29-03-2018 CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 SUPERFAMILY SSF47226 1052 1163 1.1E-16 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 SUPERFAMILY SSF47384 522 602 9.22E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 Gene3D G3DSA:1.20.120.160 1031 1156 1.4E-13 T 29-03-2018 CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 SMART SM00448 907 1027 1.1E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 PRINTS PR00344 Bacterial sensor protein C-terminal signature 689 703 4.8E-5 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 PRINTS PR00344 Bacterial sensor protein C-terminal signature 723 741 4.8E-5 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 SMART SM00091 361 429 4.2E-8 T 29-03-2018 IPR000014 PAS domain CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 SUPERFAMILY SSF103190 56 225 2.75E-17 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 Gene3D G3DSA:3.30.450.20 348 523 9.3E-20 T 29-03-2018 CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 Gene3D G3DSA:3.30.450.20 99 224 3.7E-15 T 29-03-2018 CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 SUPERFAMILY SSF52172 904 1032 3.7E-34 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 SMART SM00387 648 763 9.8E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 Pfam PF00512 His Kinase A (phospho-acceptor) domain 537 601 3.5E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 648 760 7.8E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 360 429 5.1E-9 T 29-03-2018 IPR000014 PAS domain CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 SMART SM00388 536 601 4.7E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS13060 95d2452ae1ff0ad17317cc8100c4bc9d 1169 Pfam PF00989 PAS fold 362 494 2.8E-9 T 29-03-2018 IPR013767 PAS fold GO:0006355 CHH28_RS04975 03b9560f9671d6e665d806a0ad345b85 187 SUPERFAMILY SSF56925 22 187 7.06E-13 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS04975 03b9560f9671d6e665d806a0ad345b85 187 Gene3D G3DSA:2.40.160.20 5 187 2.5E-12 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS04975 03b9560f9671d6e665d806a0ad345b85 187 Pfam PF13505 Outer membrane protein beta-barrel domain 7 187 8.8E-12 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel CHH28_RS08220 4af8035fc73ac5667fba977d7f27f0ef 688 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 46 - T 29-03-2018 IPR010916 TonB box, conserved site CHH28_RS08220 4af8035fc73ac5667fba977d7f27f0ef 688 Gene3D G3DSA:2.170.130.10 42 156 1.2E-6 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS08220 4af8035fc73ac5667fba977d7f27f0ef 688 SUPERFAMILY SSF56935 39 670 2.16E-65 T 29-03-2018 CHH28_RS08220 4af8035fc73ac5667fba977d7f27f0ef 688 Gene3D G3DSA:2.40.170.20 157 687 2.9E-48 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS03465 a660cf19fd00696f29d676abc5c0b692 132 Gene3D G3DSA:3.10.290.10 1 104 6.8E-25 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CHH28_RS03465 a660cf19fd00696f29d676abc5c0b692 132 Pfam PF01479 S4 domain 8 52 8.1E-12 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CHH28_RS03465 a660cf19fd00696f29d676abc5c0b692 132 SMART SM00363 8 71 1.1E-8 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CHH28_RS03465 a660cf19fd00696f29d676abc5c0b692 132 PIRSF PIRSF016821 5 132 8.3E-42 T 29-03-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 CHH28_RS03465 a660cf19fd00696f29d676abc5c0b692 132 SUPERFAMILY SSF55174 6 101 5.36E-28 T 29-03-2018 CHH28_RS04860 8642bad22cc5eab5fb85ea41017a56fd 357 Pfam PF02169 LPP20 lipoprotein 48 159 3.9E-8 T 29-03-2018 IPR024952 Lipoprotein LPP20-like CHH28_RS01970 e5caccef53ef6ab9683ed4cc76de26c0 326 Gene3D G3DSA:3.40.50.720 2 192 2.2E-30 T 29-03-2018 CHH28_RS01970 e5caccef53ef6ab9683ed4cc76de26c0 326 SUPERFAMILY SSF51735 3 320 1.16E-62 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS01970 e5caccef53ef6ab9683ed4cc76de26c0 326 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 312 1.6E-54 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS01970 e5caccef53ef6ab9683ed4cc76de26c0 326 Gene3D G3DSA:3.90.25.10 193 323 1.9E-26 T 29-03-2018 CHH28_RS09625 7d1e644626719425af95953e0afd0ca9 519 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 403 513 1.2E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS09625 7d1e644626719425af95953e0afd0ca9 519 Gene3D G3DSA:3.30.565.10 361 518 2.7E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS09625 7d1e644626719425af95953e0afd0ca9 519 Gene3D G3DSA:3.30.450.20 186 296 4.4E-4 T 29-03-2018 CHH28_RS09625 7d1e644626719425af95953e0afd0ca9 519 SMART SM00387 402 515 7.5E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS09625 7d1e644626719425af95953e0afd0ca9 519 SMART SM00388 295 361 1.7E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS09625 7d1e644626719425af95953e0afd0ca9 519 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 475 9.2E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS09625 7d1e644626719425af95953e0afd0ca9 519 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 512 9.2E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS09625 7d1e644626719425af95953e0afd0ca9 519 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 461 9.2E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS09625 7d1e644626719425af95953e0afd0ca9 519 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 494 9.2E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS09625 7d1e644626719425af95953e0afd0ca9 519 Pfam PF00512 His Kinase A (phospho-acceptor) domain 295 360 3.0E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS09625 7d1e644626719425af95953e0afd0ca9 519 SUPERFAMILY SSF47384 281 360 1.51E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS09625 7d1e644626719425af95953e0afd0ca9 519 SUPERFAMILY SSF55874 350 511 2.23E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS09625 7d1e644626719425af95953e0afd0ca9 519 Gene3D G3DSA:1.10.287.130 297 357 6.9E-15 T 29-03-2018 CHH28_RS11190 c6d819d1f12a25c58844c080ed3df477 258 SUPERFAMILY SSF101386 3 91 5.4E-20 T 29-03-2018 CHH28_RS11190 c6d819d1f12a25c58844c080ed3df477 258 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 163 222 3.6E-9 T 29-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CHH28_RS11190 c6d819d1f12a25c58844c080ed3df477 258 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 17 90 3.2E-24 T 29-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CHH28_RS11190 c6d819d1f12a25c58844c080ed3df477 258 Gene3D G3DSA:1.10.287.1080 135 258 5.3E-28 T 29-03-2018 CHH28_RS11190 c6d819d1f12a25c58844c080ed3df477 258 TIGRFAM TIGR00444 mazG: MazG family protein 1 252 6.3E-89 T 29-03-2018 IPR011551 NTP pyrophosphohydrolase MazG CHH28_RS11190 c6d819d1f12a25c58844c080ed3df477 258 Gene3D G3DSA:1.10.287.1080 1 121 6.3E-34 T 29-03-2018 CHH28_RS11190 c6d819d1f12a25c58844c080ed3df477 258 SUPERFAMILY SSF101386 133 233 3.36E-26 T 29-03-2018 CHH28_RS05920 9cef1c953e8181d0daf32d520574b30d 460 SUPERFAMILY SSF56281 10 431 2.39E-74 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS05920 9cef1c953e8181d0daf32d520574b30d 460 SMART SM00849 20 214 2.7E-20 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS05920 9cef1c953e8181d0daf32d520574b30d 460 Gene3D G3DSA:3.60.15.10 2 455 4.5E-47 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS05920 9cef1c953e8181d0daf32d520574b30d 460 Pfam PF00753 Metallo-beta-lactamase superfamily 22 183 4.8E-14 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS05920 9cef1c953e8181d0daf32d520574b30d 460 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 374 417 9.0E-9 T 29-03-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CHH28_RS13045 e410b49cc93d56c4e25c1fa2e175bc31 457 Gene3D G3DSA:3.80.30.20 153 395 9.4E-42 T 29-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe CHH28_RS13045 e410b49cc93d56c4e25c1fa2e175bc31 457 SUPERFAMILY SSF102114 128 386 8.76E-47 T 29-03-2018 CHH28_RS13045 e410b49cc93d56c4e25c1fa2e175bc31 457 Pfam PF04055 Radical SAM superfamily 162 339 5.4E-27 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CHH28_RS13045 e410b49cc93d56c4e25c1fa2e175bc31 457 Gene3D G3DSA:2.40.50.140 396 457 2.2E-20 T 29-03-2018 CHH28_RS13045 e410b49cc93d56c4e25c1fa2e175bc31 457 SMART SM00729 156 381 5.1E-50 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CHH28_RS13045 e410b49cc93d56c4e25c1fa2e175bc31 457 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 21 454 7.9E-106 T 29-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CHH28_RS13045 e410b49cc93d56c4e25c1fa2e175bc31 457 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 160 180 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CHH28_RS13045 e410b49cc93d56c4e25c1fa2e175bc31 457 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 21 453 1.3E-176 T 29-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CHH28_RS13045 e410b49cc93d56c4e25c1fa2e175bc31 457 Pfam PF00919 Uncharacterized protein family UPF0004 21 108 1.0E-22 T 29-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CHH28_RS13045 e410b49cc93d56c4e25c1fa2e175bc31 457 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 20 456 59.729 T 29-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CHH28_RS19310 3272172e6c59eab23f1c3528afb46eef 487 Gene3D G3DSA:1.10.760.10 318 487 5.6E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS19310 3272172e6c59eab23f1c3528afb46eef 487 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 39 487 1.2E-122 T 29-03-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase CHH28_RS19310 3272172e6c59eab23f1c3528afb46eef 487 SUPERFAMILY SSF46626 346 487 2.3E-20 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS19310 3272172e6c59eab23f1c3528afb46eef 487 PIRSF PIRSF028099 1 487 9.5E-151 T 29-03-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase CHH28_RS19310 3272172e6c59eab23f1c3528afb46eef 487 Gene3D G3DSA:1.10.760.10 49 270 9.8E-4 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS09660 a0ebe694aac618f62eb740573649b95f 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 166 2.6E-61 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CHH28_RS09660 a0ebe694aac618f62eb740573649b95f 574 Gene3D G3DSA:3.40.50.970 355 564 3.5E-48 T 29-03-2018 CHH28_RS09660 a0ebe694aac618f62eb740573649b95f 574 SUPERFAMILY SSF52518 369 571 1.73E-66 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CHH28_RS09660 a0ebe694aac618f62eb740573649b95f 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 6.4E-44 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CHH28_RS09660 a0ebe694aac618f62eb740573649b95f 574 Gene3D G3DSA:3.40.50.1220 190 354 1.4E-51 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CHH28_RS09660 a0ebe694aac618f62eb740573649b95f 574 SUPERFAMILY SSF52518 4 179 3.25E-65 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CHH28_RS09660 a0ebe694aac618f62eb740573649b95f 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 545 1.7E-47 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CHH28_RS09660 a0ebe694aac618f62eb740573649b95f 574 SUPERFAMILY SSF52467 190 362 2.12E-63 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CHH28_RS09660 a0ebe694aac618f62eb740573649b95f 574 Gene3D G3DSA:3.40.50.970 2 189 5.2E-66 T 29-03-2018 CHH28_RS09660 a0ebe694aac618f62eb740573649b95f 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 569 2.4E-254 T 29-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CHH28_RS09535 06d8801080988190f9be919367399fc7 399 SUPERFAMILY SSF52540 151 336 4.16E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09535 06d8801080988190f9be919367399fc7 399 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 5.3E-144 T 29-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CHH28_RS09535 06d8801080988190f9be919367399fc7 399 PIRSF PIRSF002401 1 383 5.4E-138 T 29-03-2018 IPR035101 GTP-binding protein, Obg-type CHH28_RS09535 06d8801080988190f9be919367399fc7 399 Gene3D G3DSA:2.70.210.12 2 156 9.3E-56 T 29-03-2018 IPR006169 GTP1/OBG domain CHH28_RS09535 06d8801080988190f9be919367399fc7 399 Pfam PF01018 GTP1/OBG 4 158 1.1E-58 T 29-03-2018 IPR006169 GTP1/OBG domain CHH28_RS09535 06d8801080988190f9be919367399fc7 399 SUPERFAMILY SSF82051 2 158 7.19E-56 T 29-03-2018 IPR006169 GTP1/OBG domain CHH28_RS09535 06d8801080988190f9be919367399fc7 399 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.474 T 29-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CHH28_RS09535 06d8801080988190f9be919367399fc7 399 Gene3D G3DSA:3.40.50.300 158 384 5.8E-32 T 29-03-2018 CHH28_RS09535 06d8801080988190f9be919367399fc7 399 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 2.1E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS09535 06d8801080988190f9be919367399fc7 399 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.1E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS09535 06d8801080988190f9be919367399fc7 399 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.1E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS09535 06d8801080988190f9be919367399fc7 399 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 2.1E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS09535 06d8801080988190f9be919367399fc7 399 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 29-03-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 CHH28_RS09535 06d8801080988190f9be919367399fc7 399 Pfam PF01926 50S ribosome-binding GTPase 161 284 8.5E-23 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS04525 32994af3d967304e388d933e8fd8b82b 427 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 145 231 1.3E-7 T 29-03-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 CHH28_RS04525 32994af3d967304e388d933e8fd8b82b 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 311 323 9.7E-30 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS04525 32994af3d967304e388d933e8fd8b82b 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 218 232 9.7E-30 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS04525 32994af3d967304e388d933e8fd8b82b 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 409 426 9.7E-30 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS04525 32994af3d967304e388d933e8fd8b82b 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 361 377 9.7E-30 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS04525 32994af3d967304e388d933e8fd8b82b 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 247 257 9.7E-30 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS04525 32994af3d967304e388d933e8fd8b82b 427 Pfam PF01189 16S rRNA methyltransferase RsmB/F 236 425 4.1E-62 T 29-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS04525 32994af3d967304e388d933e8fd8b82b 427 Pfam PF01029 NusB family 2 120 2.4E-17 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CHH28_RS04525 32994af3d967304e388d933e8fd8b82b 427 Gene3D G3DSA:3.30.70.1170 169 226 6.4E-18 T 29-03-2018 CHH28_RS04525 32994af3d967304e388d933e8fd8b82b 427 Gene3D G3DSA:3.40.50.150 227 427 2.1E-55 T 29-03-2018 CHH28_RS04525 32994af3d967304e388d933e8fd8b82b 427 SUPERFAMILY SSF48013 2 145 3.43E-26 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CHH28_RS04525 32994af3d967304e388d933e8fd8b82b 427 SUPERFAMILY SSF53335 136 426 1.14E-75 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS04525 32994af3d967304e388d933e8fd8b82b 427 Gene3D G3DSA:1.10.940.10 1 141 4.5E-23 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CHH28_RS04525 32994af3d967304e388d933e8fd8b82b 427 Gene3D G3DSA:1.10.287.730 142 168 1.5E-8 T 29-03-2018 CHH28_RS04525 32994af3d967304e388d933e8fd8b82b 427 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 426 2.4E-117 T 29-03-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS02335 c2d512515f7977b2d53ae56c0d9c951d 179 Gene3D G3DSA:3.40.630.30 16 176 2.1E-25 T 29-03-2018 CHH28_RS02335 c2d512515f7977b2d53ae56c0d9c951d 179 SUPERFAMILY SSF55729 3 136 2.23E-19 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS02335 c2d512515f7977b2d53ae56c0d9c951d 179 Pfam PF00583 Acetyltransferase (GNAT) family 55 136 1.1E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS02335 c2d512515f7977b2d53ae56c0d9c951d 179 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 20 171 1.1E-54 T 29-03-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00250+2.3.1.17|KEGG: 00260+2.3.1.178 CHH28_RS08745 77fbf7ffc2b689c0dfd51a5759cf4c84 156 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 35.992 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CHH28_RS08745 77fbf7ffc2b689c0dfd51a5759cf4c84 156 Pfam PF02542 YgbB family 1 154 1.7E-67 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CHH28_RS08745 77fbf7ffc2b689c0dfd51a5759cf4c84 156 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 155 3.8E-69 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CHH28_RS08745 77fbf7ffc2b689c0dfd51a5759cf4c84 156 Gene3D G3DSA:3.30.1330.50 1 156 2.9E-73 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CHH28_RS08745 77fbf7ffc2b689c0dfd51a5759cf4c84 156 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 29-03-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CHH28_RS08745 77fbf7ffc2b689c0dfd51a5759cf4c84 156 SUPERFAMILY SSF69765 1 155 1.83E-65 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CHH28_RS01200 d262e88c774a8607ebb41e489680ab7c 295 Gene3D G3DSA:1.10.10.10 1 78 4.5E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS01200 d262e88c774a8607ebb41e489680ab7c 295 Gene3D G3DSA:3.40.190.10 79 173 5.5E-19 T 29-03-2018 CHH28_RS01200 d262e88c774a8607ebb41e489680ab7c 295 Gene3D G3DSA:3.40.190.10 174 263 1.3E-24 T 29-03-2018 CHH28_RS01200 d262e88c774a8607ebb41e489680ab7c 295 SUPERFAMILY SSF46785 1 85 3.13E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS01200 d262e88c774a8607ebb41e489680ab7c 295 Pfam PF03466 LysR substrate binding domain 89 292 4.4E-41 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS01200 d262e88c774a8607ebb41e489680ab7c 295 SUPERFAMILY SSF53850 89 294 5.79E-45 T 29-03-2018 CHH28_RS01200 d262e88c774a8607ebb41e489680ab7c 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.8E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS01200 d262e88c774a8607ebb41e489680ab7c 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS01200 d262e88c774a8607ebb41e489680ab7c 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS01200 d262e88c774a8607ebb41e489680ab7c 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 SUPERFAMILY SSF55681 466 684 2.63E-51 T 29-03-2018 CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 Gene3D G3DSA:3.30.70.380 693 790 2.3E-25 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 SMART SM00873 211 384 9.5E-98 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 Gene3D G3DSA:2.40.50.140 56 170 9.2E-38 T 29-03-2018 CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 Pfam PF03147 Ferredoxin-fold anticodon binding domain 697 790 1.5E-27 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 SMART SM00896 697 790 2.1E-41 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 Pfam PF01588 Putative tRNA binding domain 45 144 3.5E-25 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 790 2.7E-266 T 29-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 Pfam PF03484 tRNA synthetase B5 domain 405 470 5.1E-19 T 29-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 Gene3D G3DSA:3.30.56.10 401 474 1.8E-24 T 29-03-2018 CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 Gene3D G3DSA:3.50.40.10 195 395 2.5E-70 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 SUPERFAMILY SSF56037 195 395 8.37E-75 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 Gene3D G3DSA:3.30.930.10 491 686 1.1E-38 T 29-03-2018 CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 Pfam PF03483 B3/4 domain 211 384 2.8E-70 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 Gene3D G3DSA:3.30.56.10 1 55 5.8E-14 T 29-03-2018 CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 SUPERFAMILY SSF46955 403 474 1.37E-18 T 29-03-2018 IPR009061 Putative DNA-binding domain CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 784 46.222 T 29-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 SUPERFAMILY SSF54991 692 790 7.32E-30 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 SUPERFAMILY SSF50249 35 191 8.28E-48 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS11910 6e1c3237f7de45938aa391b09c7e6814 791 SMART SM00874 402 470 2.2E-29 T 29-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 Gene3D G3DSA:2.130.10.10 3174 3766 0.015 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 Gene3D G3DSA:2.130.10.10 3919 4798 5.7E-4 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 Pfam PF01833 IPT/TIG domain 1183 1249 4.3E-7 T 29-03-2018 IPR002909 IPT domain CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 SUPERFAMILY SSF81296 1183 1250 7.42E-7 T 29-03-2018 IPR014756 Immunoglobulin E-set CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 Gene3D G3DSA:2.60.40.10 4854 4958 1.7E-5 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 Gene3D G3DSA:2.120.10.30 730 995 0.1 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 Gene3D G3DSA:2.130.10.10 1266 1594 6.4E-4 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 Gene3D G3DSA:2.60.40.10 2398 2522 0.34 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 Gene3D G3DSA:2.60.40.650 2849 2944 0.0023 T 29-03-2018 CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 Gene3D G3DSA:3.90.182.10 5425 5502 7.2E-11 T 29-03-2018 CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 Gene3D G3DSA:3.90.182.10 5347 5424 1.2E-5 T 29-03-2018 CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 SUPERFAMILY SSF75011 1320 1564 7.06E-6 T 29-03-2018 CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 SUPERFAMILY SSF103647 5387 5487 3.4E-6 T 29-03-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 Gene3D G3DSA:2.60.40.10 1846 1923 0.021 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 SUPERFAMILY SSF50998 750 828 1.02E-5 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 SUPERFAMILY SSF50998 236 383 1.02E-5 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 Gene3D G3DSA:2.130.10.120 161 493 7.3E-5 T 29-03-2018 CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 Gene3D G3DSA:2.130.10.10 1925 2317 1.5E-4 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 Gene3D G3DSA:2.60.40.10 1182 1258 5.4E-9 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 Gene3D G3DSA:2.60.40.10 1739 1822 2.1E-6 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 Gene3D G3DSA:2.60.40.10 1082 1173 0.39 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS16455 57bcd44d0a4a663505ea69ef028c9b67 6764 Gene3D G3DSA:2.60.40.10 561 683 0.16 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS06870 fee097907dd9ba8d8f4d0098d2c8912d 617 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 17 616 1.6E-262 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CHH28_RS06870 fee097907dd9ba8d8f4d0098d2c8912d 617 ProSitePatterns PS00802 Transketolase signature 2. 424 440 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CHH28_RS06870 fee097907dd9ba8d8f4d0098d2c8912d 617 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 14 617 43.894 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CHH28_RS06870 fee097907dd9ba8d8f4d0098d2c8912d 617 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 15 286 1.4E-118 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CHH28_RS06870 fee097907dd9ba8d8f4d0098d2c8912d 617 SUPERFAMILY SSF52518 247 380 2.62E-77 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CHH28_RS06870 fee097907dd9ba8d8f4d0098d2c8912d 617 SUPERFAMILY SSF52518 12 203 2.62E-77 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CHH28_RS06870 fee097907dd9ba8d8f4d0098d2c8912d 617 SUPERFAMILY SSF52518 317 501 3.03E-55 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CHH28_RS06870 fee097907dd9ba8d8f4d0098d2c8912d 617 Gene3D G3DSA:3.40.50.970 3 300 1.2E-79 T 29-03-2018 CHH28_RS06870 fee097907dd9ba8d8f4d0098d2c8912d 617 Pfam PF02779 Transketolase, pyrimidine binding domain 318 478 5.2E-38 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CHH28_RS06870 fee097907dd9ba8d8f4d0098d2c8912d 617 Gene3D G3DSA:3.40.50.920 494 617 8.6E-31 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CHH28_RS06870 fee097907dd9ba8d8f4d0098d2c8912d 617 Pfam PF02780 Transketolase, C-terminal domain 500 613 7.2E-24 T 29-03-2018 IPR033248 Transketolase, C-terminal domain CHH28_RS06870 fee097907dd9ba8d8f4d0098d2c8912d 617 SUPERFAMILY SSF52922 490 616 4.06E-28 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CHH28_RS06870 fee097907dd9ba8d8f4d0098d2c8912d 617 SMART SM00861 318 482 5.0E-66 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CHH28_RS06870 fee097907dd9ba8d8f4d0098d2c8912d 617 Gene3D G3DSA:3.40.50.970 301 489 7.4E-61 T 29-03-2018 CHH28_RS19675 cc6669f9e5f2271713543244f3c4e98d 190 SUPERFAMILY SSF48317 19 184 1.44E-33 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CHH28_RS19675 cc6669f9e5f2271713543244f3c4e98d 190 Pfam PF01569 PAP2 superfamily 76 178 1.6E-21 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CHH28_RS19675 cc6669f9e5f2271713543244f3c4e98d 190 SMART SM00014 72 181 4.9E-17 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CHH28_RS19675 cc6669f9e5f2271713543244f3c4e98d 190 Gene3D G3DSA:1.20.144.10 27 184 8.4E-24 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CHH28_RS09795 16f6438efbfebd362b814f47bb193b9a 306 Pfam PF00480 ROK family 7 301 1.0E-68 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CHH28_RS09795 16f6438efbfebd362b814f47bb193b9a 306 Gene3D G3DSA:3.30.420.40 2 122 6.9E-19 T 29-03-2018 CHH28_RS09795 16f6438efbfebd362b814f47bb193b9a 306 Gene3D G3DSA:3.30.420.40 123 304 5.7E-51 T 29-03-2018 CHH28_RS09795 16f6438efbfebd362b814f47bb193b9a 306 SUPERFAMILY SSF53067 6 303 1.08E-60 T 29-03-2018 CHH28_RS12405 1f3bc39065f3f9c550c2f2edea6bc6c0 619 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 124 601 1.4E-133 T 29-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CHH28_RS12405 1f3bc39065f3f9c550c2f2edea6bc6c0 619 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 342 594 2.1E-72 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CHH28_RS12405 1f3bc39065f3f9c550c2f2edea6bc6c0 619 SUPERFAMILY SSF82866 328 346 3.53E-41 T 29-03-2018 CHH28_RS12405 1f3bc39065f3f9c550c2f2edea6bc6c0 619 SUPERFAMILY SSF82866 411 606 3.53E-41 T 29-03-2018 CHH28_RS12405 1f3bc39065f3f9c550c2f2edea6bc6c0 619 Pfam PF02355 Protein export membrane protein 437 602 1.8E-20 T 29-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CHH28_RS12405 1f3bc39065f3f9c550c2f2edea6bc6c0 619 Pfam PF13721 SecD export protein N-terminal TM region 2 104 1.6E-30 T 29-03-2018 IPR027398 SecD export protein N-terminal TM domain CHH28_RS12405 1f3bc39065f3f9c550c2f2edea6bc6c0 619 Gene3D G3DSA:1.20.1640.10 360 610 1.9E-34 T 29-03-2018 CHH28_RS12405 1f3bc39065f3f9c550c2f2edea6bc6c0 619 Pfam PF07549 SecD/SecF GG Motif 117 141 1.6E-5 T 29-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CHH28_RS12405 1f3bc39065f3f9c550c2f2edea6bc6c0 619 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 616 47.282 T 29-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CHH28_RS09685 5193f48455370e74d1d2d9ffa9310165 770 Pfam PF00512 His Kinase A (phospho-acceptor) domain 401 459 2.6E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS09685 5193f48455370e74d1d2d9ffa9310165 770 SMART SM00448 641 760 3.0E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS09685 5193f48455370e74d1d2d9ffa9310165 770 SUPERFAMILY SSF47384 392 459 7.65E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS09685 5193f48455370e74d1d2d9ffa9310165 770 SUPERFAMILY SSF52172 641 763 5.69E-27 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS09685 5193f48455370e74d1d2d9ffa9310165 770 Pfam PF00072 Response regulator receiver domain 643 759 9.0E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS09685 5193f48455370e74d1d2d9ffa9310165 770 Gene3D G3DSA:3.30.565.10 457 623 1.3E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS09685 5193f48455370e74d1d2d9ffa9310165 770 Gene3D G3DSA:1.10.287.130 382 456 2.2E-11 T 29-03-2018 CHH28_RS09685 5193f48455370e74d1d2d9ffa9310165 770 SMART SM00388 400 462 1.9E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS09685 5193f48455370e74d1d2d9ffa9310165 770 Gene3D G3DSA:3.40.50.2300 624 768 2.3E-27 T 29-03-2018 CHH28_RS09685 5193f48455370e74d1d2d9ffa9310165 770 SUPERFAMILY SSF55874 451 622 4.35E-10 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS09685 5193f48455370e74d1d2d9ffa9310165 770 Pfam PF07696 7TMR-DISM extracellular 2 38 169 1.2E-18 T 29-03-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 CHH28_RS13630 a0a1b705439d0dc31647e4a63c754b82 499 Gene3D G3DSA:3.30.1890.10 38 421 8.9E-14 T 29-03-2018 CHH28_RS19245 5f49faff7061734b90cf204f4fd499a8 331 TIGRFAM TIGR00109 hemH: ferrochelatase 12 328 9.1E-97 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CHH28_RS19245 5f49faff7061734b90cf204f4fd499a8 331 Hamap MF_00323 Ferrochelatase [hemH]. 11 328 36.528 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CHH28_RS19245 5f49faff7061734b90cf204f4fd499a8 331 Pfam PF00762 Ferrochelatase 14 327 1.6E-107 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CHH28_RS19245 5f49faff7061734b90cf204f4fd499a8 331 Gene3D G3DSA:3.40.50.1400 9 180 5.2E-45 T 29-03-2018 CHH28_RS19245 5f49faff7061734b90cf204f4fd499a8 331 ProSitePatterns PS00534 Ferrochelatase signature. 197 215 - T 29-03-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CHH28_RS19245 5f49faff7061734b90cf204f4fd499a8 331 SUPERFAMILY SSF53800 11 331 8.83E-103 T 29-03-2018 CHH28_RS19245 5f49faff7061734b90cf204f4fd499a8 331 Gene3D G3DSA:3.40.50.1400 181 308 7.9E-43 T 29-03-2018 CHH28_RS09560 7192a3906f0f7c8f73c34a28611ec247 332 SUPERFAMILY SSF52374 17 179 4.5E-32 T 29-03-2018 CHH28_RS09560 7192a3906f0f7c8f73c34a28611ec247 332 SMART SM00904 187 313 3.5E-54 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CHH28_RS09560 7192a3906f0f7c8f73c34a28611ec247 332 Gene3D G3DSA:3.40.50.620 1 183 1.8E-46 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS09560 7192a3906f0f7c8f73c34a28611ec247 332 Gene3D G3DSA:2.40.30.30 184 328 1.9E-35 T 29-03-2018 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 CHH28_RS09560 7192a3906f0f7c8f73c34a28611ec247 332 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 66 2.0E-8 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CHH28_RS09560 7192a3906f0f7c8f73c34a28611ec247 332 PIRSF PIRSF004491 1 318 6.1E-97 T 29-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CHH28_RS09560 7192a3906f0f7c8f73c34a28611ec247 332 Pfam PF06574 FAD synthetase 15 171 5.9E-53 T 29-03-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CHH28_RS09560 7192a3906f0f7c8f73c34a28611ec247 332 Pfam PF01687 Riboflavin kinase 188 312 6.8E-35 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CHH28_RS09560 7192a3906f0f7c8f73c34a28611ec247 332 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 312 1.0E-91 T 29-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CHH28_RS09560 7192a3906f0f7c8f73c34a28611ec247 332 SUPERFAMILY SSF82114 179 314 5.01E-39 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CHH28_RS17950 8b6c1096c2a067e90b9b29cc593e729d 487 Gene3D G3DSA:3.40.640.10 141 361 7.9E-41 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS17950 8b6c1096c2a067e90b9b29cc593e729d 487 SUPERFAMILY SSF46785 1 77 7.64E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17950 8b6c1096c2a067e90b9b29cc593e729d 487 Gene3D G3DSA:3.90.1150.10 362 487 2.6E-26 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS17950 8b6c1096c2a067e90b9b29cc593e729d 487 Pfam PF00155 Aminotransferase class I and II 140 475 1.1E-32 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CHH28_RS17950 8b6c1096c2a067e90b9b29cc593e729d 487 SMART SM00345 14 73 2.3E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS17950 8b6c1096c2a067e90b9b29cc593e729d 487 Gene3D G3DSA:1.10.10.10 1 75 8.1E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17950 8b6c1096c2a067e90b9b29cc593e729d 487 SUPERFAMILY SSF53383 105 483 3.67E-88 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS17950 8b6c1096c2a067e90b9b29cc593e729d 487 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 1.1E-14 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS16925 bdb9eb231d6e4523830a173dfd0179ef 704 Pfam PF01515 Phosphate acetyl/butaryl transferase 382 697 5.0E-119 T 29-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CHH28_RS16925 bdb9eb231d6e4523830a173dfd0179ef 704 SUPERFAMILY SSF52540 1 232 8.1E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS16925 bdb9eb231d6e4523830a173dfd0179ef 704 SUPERFAMILY SSF75138 221 345 2.62E-28 T 29-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CHH28_RS16925 bdb9eb231d6e4523830a173dfd0179ef 704 SUPERFAMILY SSF53659 383 701 1.3E-88 T 29-03-2018 CHH28_RS16925 bdb9eb231d6e4523830a173dfd0179ef 704 Pfam PF13500 AAA domain 4 222 3.1E-29 T 29-03-2018 CHH28_RS16925 bdb9eb231d6e4523830a173dfd0179ef 704 Gene3D G3DSA:3.40.1390.20 223 358 7.3E-32 T 29-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CHH28_RS16925 bdb9eb231d6e4523830a173dfd0179ef 704 Gene3D G3DSA:3.40.718.10 400 676 1.9E-60 T 29-03-2018 CHH28_RS16925 bdb9eb231d6e4523830a173dfd0179ef 704 Pfam PF07085 DRTGG domain 225 336 7.6E-32 T 29-03-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CHH28_RS16925 bdb9eb231d6e4523830a173dfd0179ef 704 Gene3D G3DSA:3.40.50.300 3 222 1.3E-30 T 29-03-2018 CHH28_RS16925 bdb9eb231d6e4523830a173dfd0179ef 704 PIRSF PIRSF006107 1 704 0.0 T 29-03-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CHH28_RS16925 bdb9eb231d6e4523830a173dfd0179ef 704 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 397 697 4.4E-123 T 29-03-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CHH28_RS15470 ffc2834cf4de053702709ce5f49a6b1c 232 Gene3D G3DSA:3.40.50.300 7 229 2.0E-57 T 29-03-2018 CHH28_RS15470 ffc2834cf4de053702709ce5f49a6b1c 232 SMART SM00382 39 228 1.6E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS15470 ffc2834cf4de053702709ce5f49a6b1c 232 SUPERFAMILY SSF52540 10 221 1.13E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS15470 ffc2834cf4de053702709ce5f49a6b1c 232 Pfam PF00005 ABC transporter 31 178 6.2E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS09865 1ddbf895f5caf899eb53e6f93bb8530a 400 Pfam PF02515 CoA-transferase family III 4 372 1.8E-97 T 29-03-2018 IPR003673 CoA-transferase family III GO:0003824 CHH28_RS09865 1ddbf895f5caf899eb53e6f93bb8530a 400 Gene3D G3DSA:3.40.50.10540 1 400 5.2E-122 T 29-03-2018 IPR023606 CoA-transferase family III domain CHH28_RS09865 1ddbf895f5caf899eb53e6f93bb8530a 400 SUPERFAMILY SSF89796 1 396 4.45E-114 T 29-03-2018 IPR023606 CoA-transferase family III domain CHH28_RS04150 fae99d5b098a934bd36e756c1aec29d0 307 Gene3D G3DSA:3.20.20.70 1 297 5.5E-108 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS04150 fae99d5b098a934bd36e756c1aec29d0 307 SUPERFAMILY SSF51569 1 285 3.3E-69 T 29-03-2018 CHH28_RS04150 fae99d5b098a934bd36e756c1aec29d0 307 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 231 240 - T 29-03-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111 CHH28_RS04150 fae99d5b098a934bd36e756c1aec29d0 307 Pfam PF00682 HMGL-like 5 276 1.1E-53 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CHH28_RS13985 2ecbaa13dfc91fe23939e3cab5931d74 234 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 232 2.1E-87 T 29-03-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS13985 2ecbaa13dfc91fe23939e3cab5931d74 234 Gene3D G3DSA:3.30.420.10 2 175 1.3E-40 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS13985 2ecbaa13dfc91fe23939e3cab5931d74 234 SMART SM00479 2 173 1.4E-50 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CHH28_RS13985 2ecbaa13dfc91fe23939e3cab5931d74 234 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 213 8.5E-65 T 29-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS13985 2ecbaa13dfc91fe23939e3cab5931d74 234 SUPERFAMILY SSF53098 1 174 2.74E-54 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS13985 2ecbaa13dfc91fe23939e3cab5931d74 234 Pfam PF00929 Exonuclease 4 164 3.8E-35 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CHH28_RS03500 76fac6333fdc6ae5beb72e20e23bbbc1 130 Pfam PF03748 Flagellar basal body-associated protein FliL 28 129 2.0E-20 T 29-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CHH28_RS04630 c18075e1b4ac438e4e02adce09c16f55 243 Gene3D G3DSA:1.20.58.220 6 120 4.7E-27 T 29-03-2018 CHH28_RS04630 c18075e1b4ac438e4e02adce09c16f55 243 Gene3D G3DSA:1.20.58.220 121 242 1.2E-28 T 29-03-2018 CHH28_RS04630 c18075e1b4ac438e4e02adce09c16f55 243 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 223 3.0E-65 T 29-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CHH28_RS04630 c18075e1b4ac438e4e02adce09c16f55 243 SUPERFAMILY SSF109755 13 232 7.53E-67 T 29-03-2018 CHH28_RS04630 c18075e1b4ac438e4e02adce09c16f55 243 PIRSF PIRSF003107 7 228 6.1E-65 T 29-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CHH28_RS04630 c18075e1b4ac438e4e02adce09c16f55 243 Pfam PF01895 PhoU domain 28 110 4.9E-20 T 29-03-2018 IPR026022 PhoU domain CHH28_RS04630 c18075e1b4ac438e4e02adce09c16f55 243 Pfam PF01895 PhoU domain 129 213 7.1E-17 T 29-03-2018 IPR026022 PhoU domain CHH28_RS16585 3bf4790f6262f38a2fcbc530c73edd77 171 Gene3D G3DSA:3.30.300.130 73 169 1.8E-26 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CHH28_RS16585 3bf4790f6262f38a2fcbc530c73edd77 171 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 2 169 5.0E-70 T 29-03-2018 IPR017776 FeS assembly SUF system protein SufT, putative CHH28_RS16585 3bf4790f6262f38a2fcbc530c73edd77 171 SUPERFAMILY SSF117916 73 167 1.9E-30 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CHH28_RS16585 3bf4790f6262f38a2fcbc530c73edd77 171 Pfam PF01883 Iron-sulfur cluster assembly protein 75 147 3.0E-19 T 29-03-2018 IPR002744 MIP18 family-like CHH28_RS11670 769199e560783560ac4b7ef1235554cd 155 PRINTS PR00601 Bacterioferritin signature 3 22 8.3E-50 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11670 769199e560783560ac4b7ef1235554cd 155 PRINTS PR00601 Bacterioferritin signature 86 106 8.3E-50 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11670 769199e560783560ac4b7ef1235554cd 155 PRINTS PR00601 Bacterioferritin signature 107 127 8.3E-50 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11670 769199e560783560ac4b7ef1235554cd 155 PRINTS PR00601 Bacterioferritin signature 23 43 8.3E-50 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11670 769199e560783560ac4b7ef1235554cd 155 PRINTS PR00601 Bacterioferritin signature 44 64 8.3E-50 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11670 769199e560783560ac4b7ef1235554cd 155 PRINTS PR00601 Bacterioferritin signature 129 150 8.3E-50 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11670 769199e560783560ac4b7ef1235554cd 155 PRINTS PR00601 Bacterioferritin signature 65 85 8.3E-50 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11670 769199e560783560ac4b7ef1235554cd 155 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11670 769199e560783560ac4b7ef1235554cd 155 Gene3D G3DSA:1.20.1260.10 2 150 1.4E-40 T 29-03-2018 IPR012347 Ferritin-related CHH28_RS11670 769199e560783560ac4b7ef1235554cd 155 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 3.9E-51 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11670 769199e560783560ac4b7ef1235554cd 155 Pfam PF00210 Ferritin-like domain 8 144 2.8E-40 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CHH28_RS11670 769199e560783560ac4b7ef1235554cd 155 PIRSF PIRSF002560 1 155 1.0E-63 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CHH28_RS11670 769199e560783560ac4b7ef1235554cd 155 SUPERFAMILY SSF47240 1 155 8.75E-50 T 29-03-2018 IPR009078 Ferritin-like superfamily CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 SUPERFAMILY SSF82866 818 1009 1.44E-46 T 29-03-2018 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 SUPERFAMILY SSF82866 291 489 9.02E-51 T 29-03-2018 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.7E-79 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.7E-79 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 1.7E-79 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.7E-79 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.7E-79 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.7E-79 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 1.7E-79 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.7E-79 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.7E-79 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 Gene3D G3DSA:3.30.2090.10 180 265 4.3E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 SUPERFAMILY SSF82693 786 831 3.56E-13 T 29-03-2018 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 SUPERFAMILY SSF82693 657 699 3.56E-13 T 29-03-2018 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 SUPERFAMILY SSF82693 552 649 2.07E-14 T 29-03-2018 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 Gene3D G3DSA:3.30.70.1430 40 141 1.0E-29 T 29-03-2018 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 SUPERFAMILY SSF82693 40 133 2.88E-26 T 29-03-2018 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 SUPERFAMILY SSF82714 182 265 9.16E-21 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 SUPERFAMILY SSF82714 700 785 1.57E-21 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 Gene3D G3DSA:3.30.2090.10 699 786 1.7E-22 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 Gene3D G3DSA:3.30.70.1430 554 647 3.2E-7 T 29-03-2018 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 SUPERFAMILY SSF82693 267 323 3.79E-25 T 29-03-2018 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 SUPERFAMILY SSF82693 135 181 3.79E-25 T 29-03-2018 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 Gene3D G3DSA:1.20.1640.10 266 491 8.9E-49 T 29-03-2018 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 Gene3D G3DSA:1.20.1640.10 787 1012 6.1E-43 T 29-03-2018 CHH28_RS15790 d293c587654dd6d12dbade17462718a8 1020 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 4.2E-300 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS11275 95bad644f8e925e37250d62d3fa47aaf 387 SUPERFAMILY SSF53383 3 381 3.13E-97 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS11275 95bad644f8e925e37250d62d3fa47aaf 387 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 200 219 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CHH28_RS11275 95bad644f8e925e37250d62d3fa47aaf 387 Pfam PF00266 Aminotransferase class-V 4 371 2.5E-76 T 29-03-2018 IPR000192 Aminotransferase class V domain CHH28_RS11275 95bad644f8e925e37250d62d3fa47aaf 387 Gene3D G3DSA:3.40.640.10 12 265 9.9E-54 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS11275 95bad644f8e925e37250d62d3fa47aaf 387 Gene3D G3DSA:3.90.1150.10 272 387 9.2E-32 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS11275 95bad644f8e925e37250d62d3fa47aaf 387 PIRSF PIRSF005572 1 386 9.4E-117 T 29-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CHH28_RS18720 5dd4ac40d0a0f42220e64ad7e786922d 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 5.0E-27 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CHH28_RS18720 5dd4ac40d0a0f42220e64ad7e786922d 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 5.0E-27 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CHH28_RS18720 5dd4ac40d0a0f42220e64ad7e786922d 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 5.0E-27 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CHH28_RS18720 5dd4ac40d0a0f42220e64ad7e786922d 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 5.0E-27 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CHH28_RS18720 5dd4ac40d0a0f42220e64ad7e786922d 258 Pfam PF01311 Bacterial export proteins, family 1 15 247 2.3E-66 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CHH28_RS18720 5dd4ac40d0a0f42220e64ad7e786922d 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 255 5.7E-71 T 29-03-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 CHH28_RS00485 6f470f9c9968a889aafa951e9516c8fd 282 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CHH28_RS00485 6f470f9c9968a889aafa951e9516c8fd 282 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CHH28_RS00485 6f470f9c9968a889aafa951e9516c8fd 282 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 273 1.7E-97 T 29-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CHH28_RS00485 6f470f9c9968a889aafa951e9516c8fd 282 SUPERFAMILY SSF51717 10 274 2.62E-97 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CHH28_RS00485 6f470f9c9968a889aafa951e9516c8fd 282 Pfam PF00809 Pterin binding enzyme 18 259 2.3E-83 T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CHH28_RS00485 6f470f9c9968a889aafa951e9516c8fd 282 Gene3D G3DSA:3.20.20.20 14 153 3.1E-57 T 29-03-2018 CHH28_RS00485 6f470f9c9968a889aafa951e9516c8fd 282 Gene3D G3DSA:3.20.20.20 154 279 3.6E-44 T 29-03-2018 CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 255 2.0E-24 T 29-03-2018 IPR000014 PAS domain CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 131 4.3E-15 T 29-03-2018 IPR000014 PAS domain CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 SUPERFAMILY SSF55073 264 422 2.49E-45 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 Pfam PF08448 PAS fold 18 127 4.7E-19 T 29-03-2018 IPR013656 PAS fold-4 CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 SMART SM00267 248 421 3.9E-53 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 Pfam PF13682 Chemoreceptor zinc-binding domain 709 769 1.9E-7 T 29-03-2018 IPR025991 Chemoreceptor zinc-binding domain CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 Pfam PF13426 PAS domain 149 246 3.5E-12 T 29-03-2018 IPR000014 PAS domain CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 Gene3D G3DSA:3.30.450.20 127 260 1.1E-25 T 29-03-2018 CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 SMART SM00086 209 248 99.0 T 29-03-2018 IPR001610 PAC motif CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 SMART SM00086 84 126 0.062 T 29-03-2018 IPR001610 PAC motif CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 Pfam PF00990 Diguanylate cyclase, GGDEF domain 260 417 6.7E-46 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 Gene3D G3DSA:3.30.70.270 261 422 1.7E-53 T 29-03-2018 CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 SMART SM00091 138 204 1.8E-9 T 29-03-2018 IPR000014 PAS domain CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 SMART SM00091 12 78 2.1E-7 T 29-03-2018 IPR000014 PAS domain CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 SUPERFAMILY SSF55785 123 246 6.63E-24 T 29-03-2018 IPR000014 PAS domain CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 SMART SM00052 431 675 1.9E-93 T 29-03-2018 IPR001633 EAL domain CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 SUPERFAMILY SSF55785 17 127 6.46E-21 T 29-03-2018 IPR000014 PAS domain CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 256 420 1.3E-38 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 Pfam PF00563 EAL domain 438 670 3.6E-68 T 29-03-2018 IPR001633 EAL domain CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 Gene3D G3DSA:3.20.20.450 423 688 1.1E-86 T 29-03-2018 IPR001633 EAL domain CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 SUPERFAMILY SSF141868 437 684 1.57E-83 T 29-03-2018 IPR001633 EAL domain CHH28_RS13490 e3327bf91f7d7bdb78916ec74f100ece 807 Gene3D G3DSA:3.30.450.20 5 126 1.4E-23 T 29-03-2018 CHH28_RS10860 840ff8a81c7b1080ec236a9bef4937d6 52 SUPERFAMILY SSF46689 1 46 1.49E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS10860 840ff8a81c7b1080ec236a9bef4937d6 52 Pfam PF01527 Transposase 2 49 4.6E-15 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CHH28_RS10860 840ff8a81c7b1080ec236a9bef4937d6 52 Gene3D G3DSA:1.10.10.10 1 52 8.2E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17235 bada3208e6699d0e10b29ec62c9c985e 583 SUPERFAMILY SSF52172 5 138 4.84E-30 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS17235 bada3208e6699d0e10b29ec62c9c985e 583 Pfam PF00072 Response regulator receiver domain 6 110 3.3E-20 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS17235 bada3208e6699d0e10b29ec62c9c985e 583 Pfam PF00563 EAL domain 458 569 1.3E-8 T 29-03-2018 IPR001633 EAL domain CHH28_RS17235 bada3208e6699d0e10b29ec62c9c985e 583 SUPERFAMILY SSF141868 422 577 1.7E-9 T 29-03-2018 IPR001633 EAL domain CHH28_RS17235 bada3208e6699d0e10b29ec62c9c985e 583 SMART SM00448 3 113 1.6E-16 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS17235 bada3208e6699d0e10b29ec62c9c985e 583 SUPERFAMILY SSF55785 119 220 2.27E-7 T 29-03-2018 IPR000014 PAS domain CHH28_RS17235 bada3208e6699d0e10b29ec62c9c985e 583 Gene3D G3DSA:3.40.50.2300 2 126 2.4E-26 T 29-03-2018 CHH28_RS17235 bada3208e6699d0e10b29ec62c9c985e 583 SMART SM00091 126 194 5.6E-4 T 29-03-2018 IPR000014 PAS domain CHH28_RS17235 bada3208e6699d0e10b29ec62c9c985e 583 Gene3D G3DSA:3.20.20.450 376 582 6.8E-11 T 29-03-2018 IPR001633 EAL domain CHH28_RS17235 bada3208e6699d0e10b29ec62c9c985e 583 Gene3D G3DSA:3.30.450.20 127 224 1.0E-7 T 29-03-2018 CHH28_RS10605 828bb87bbbcb9708baf439905dd8742f 106 SUPERFAMILY SSF54292 3 105 4.55E-26 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CHH28_RS10605 828bb87bbbcb9708baf439905dd8742f 106 Gene3D G3DSA:3.10.20.30 1 106 8.1E-25 T 29-03-2018 IPR012675 Beta-grasp domain CHH28_RS10605 828bb87bbbcb9708baf439905dd8742f 106 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 88 3.6E-11 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CHH28_RS18465 84d0a3fea25b473b5164ed3a14da05cf 429 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 328 348 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CHH28_RS18465 84d0a3fea25b473b5164ed3a14da05cf 429 Pfam PF00860 Permease family 12 380 2.9E-97 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CHH28_RS18465 84d0a3fea25b473b5164ed3a14da05cf 429 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 404 4.6E-115 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CHH28_RS06530 2b48d8e743cd6b634b1c9a12e3699ea3 198 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 4 196 2.6E-82 T 29-03-2018 IPR010743 Methionine biosynthesis MetW CHH28_RS06530 2b48d8e743cd6b634b1c9a12e3699ea3 198 Gene3D G3DSA:3.40.50.150 2 180 7.1E-18 T 29-03-2018 CHH28_RS06530 2b48d8e743cd6b634b1c9a12e3699ea3 198 SUPERFAMILY SSF53335 8 189 3.73E-29 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS06530 2b48d8e743cd6b634b1c9a12e3699ea3 198 Pfam PF07021 Methionine biosynthesis protein MetW 4 196 1.6E-81 T 29-03-2018 IPR010743 Methionine biosynthesis MetW CHH28_RS05915 16b4f3b7e212412ccefff7aeaef9526e 365 Gene3D G3DSA:1.10.287.130 132 189 1.9E-6 T 29-03-2018 CHH28_RS05915 16b4f3b7e212412ccefff7aeaef9526e 365 SUPERFAMILY SSF55874 213 360 4.19E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS05915 16b4f3b7e212412ccefff7aeaef9526e 365 SMART SM00387 252 363 3.1E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS05915 16b4f3b7e212412ccefff7aeaef9526e 365 Gene3D G3DSA:3.30.565.10 190 362 2.1E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS05915 16b4f3b7e212412ccefff7aeaef9526e 365 SMART SM00388 142 206 0.0078 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS05915 16b4f3b7e212412ccefff7aeaef9526e 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 340 5.1E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS05915 16b4f3b7e212412ccefff7aeaef9526e 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 290 304 5.1E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS05915 16b4f3b7e212412ccefff7aeaef9526e 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 360 5.1E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS05915 16b4f3b7e212412ccefff7aeaef9526e 365 SUPERFAMILY SSF47384 127 206 4.32E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS05915 16b4f3b7e212412ccefff7aeaef9526e 365 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 255 361 6.8E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS09495 11906b05b0c9522fe11fabd42ef6e88f 389 Gene3D G3DSA:3.30.930.10 19 314 3.4E-42 T 29-03-2018 CHH28_RS09495 11906b05b0c9522fe11fabd42ef6e88f 389 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 373 29.501 T 29-03-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 CHH28_RS09495 11906b05b0c9522fe11fabd42ef6e88f 389 SUPERFAMILY SSF55681 7 321 3.55E-53 T 29-03-2018 CHH28_RS09495 11906b05b0c9522fe11fabd42ef6e88f 389 PIRSF PIRSF001549 7 385 1.5E-42 T 29-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CHH28_RS09495 11906b05b0c9522fe11fabd42ef6e88f 389 Pfam PF13393 Histidyl-tRNA synthetase 12 322 2.9E-110 T 29-03-2018 CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 Gene3D G3DSA:3.40.50.200 509 936 6.7E-60 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 SUPERFAMILY SSF52743 837 932 9.82E-60 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 SUPERFAMILY SSF52743 752 795 9.82E-60 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 SUPERFAMILY SSF52743 518 721 9.82E-60 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 Gene3D G3DSA:2.60.120.640 252 342 1.9E-12 T 29-03-2018 CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 Gene3D G3DSA:2.60.120.640 343 424 4.0E-13 T 29-03-2018 CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 Gene3D G3DSA:2.60.120.640 154 251 1.6E-11 T 29-03-2018 CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 Pfam PF00082 Subtilase family 559 911 2.7E-33 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 Gene3D G3DSA:2.60.120.260 947 1095 1.1E-22 T 29-03-2018 IPR008979 Galactose-binding domain-like CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 SUPERFAMILY SSF49785 951 1056 3.23E-17 T 29-03-2018 IPR008979 Galactose-binding domain-like CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 Pfam PF01483 Proprotein convertase P-domain 978 1057 6.4E-11 T 29-03-2018 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 611 621 - T 29-03-2018 IPR022398 Peptidase S8, subtilisin, His-active site CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 Gene3D G3DSA:2.60.500.10 2 53 5.7E-5 T 29-03-2018 CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 564 575 - T 29-03-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 843 853 - T 29-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 PRINTS PR00723 Subtilisin serine protease family (S8) signature 842 858 8.8E-17 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 PRINTS PR00723 Subtilisin serine protease family (S8) signature 559 578 8.8E-17 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 PRINTS PR00723 Subtilisin serine protease family (S8) signature 607 620 8.8E-17 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 Gene3D G3DSA:2.60.40.10 425 508 8.7E-11 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS09240 d5385e5040f960066934f66bc8b9dc49 1099 Gene3D G3DSA:2.60.40.10 54 142 1.1E-6 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS08045 0152e55d702a8b54313b44114ec48ce2 322 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 195 222 1.8E-58 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CHH28_RS08045 0152e55d702a8b54313b44114ec48ce2 322 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 169 192 1.8E-58 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CHH28_RS08045 0152e55d702a8b54313b44114ec48ce2 322 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 59 85 1.8E-58 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CHH28_RS08045 0152e55d702a8b54313b44114ec48ce2 322 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 138 161 1.8E-58 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CHH28_RS08045 0152e55d702a8b54313b44114ec48ce2 322 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 22 49 1.8E-58 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CHH28_RS08045 0152e55d702a8b54313b44114ec48ce2 322 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 297 322 1.8E-58 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CHH28_RS08045 0152e55d702a8b54313b44114ec48ce2 322 Gene3D G3DSA:3.40.190.80 190 322 1.3E-47 T 29-03-2018 CHH28_RS08045 0152e55d702a8b54313b44114ec48ce2 322 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 322 41.91 T 29-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CHH28_RS08045 0152e55d702a8b54313b44114ec48ce2 322 Gene3D G3DSA:3.30.540.10 1 189 7.7E-57 T 29-03-2018 CHH28_RS08045 0152e55d702a8b54313b44114ec48ce2 322 PIRSF PIRSF000904 2 322 6.1E-115 T 29-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CHH28_RS08045 0152e55d702a8b54313b44114ec48ce2 322 SUPERFAMILY SSF56655 3 321 1.55E-103 T 29-03-2018 CHH28_RS08045 0152e55d702a8b54313b44114ec48ce2 322 PIRSF PIRSF500210 3 322 3.5E-117 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CHH28_RS08045 0152e55d702a8b54313b44114ec48ce2 322 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 15 183 1.6E-55 T 29-03-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 Gene3D G3DSA:1.10.8.60 515 606 1.1E-29 T 29-03-2018 CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 615 631 2.7E-52 T 29-03-2018 CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 697 716 2.7E-52 T 29-03-2018 CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 379 398 2.7E-52 T 29-03-2018 CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 750 768 2.7E-52 T 29-03-2018 CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 727 746 2.7E-52 T 29-03-2018 CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 375 513 7.9E-24 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 700 708 - T 29-03-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 Gene3D G3DSA:2.30.130.40 16 136 1.1E-17 T 29-03-2018 CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 Gene3D G3DSA:3.30.230.10 609 796 1.6E-61 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 SUPERFAMILY SSF88697 30 223 1.96E-21 T 29-03-2018 IPR015947 PUA-like domain CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 592 795 9.6E-78 T 29-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 30 224 6.5E-29 T 29-03-2018 IPR003111 Lon, substrate-binding domain CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 Hamap MF_01973 Lon protease [lon]. 30 796 60.97 T 29-03-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 SMART SM00464 29 224 7.2E-33 T 29-03-2018 IPR003111 Lon, substrate-binding domain CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 SMART SM00382 371 519 1.1E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 SUPERFAMILY SSF54211 615 794 1.37E-46 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 Gene3D G3DSA:3.40.50.300 336 514 8.6E-30 T 29-03-2018 CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 SUPERFAMILY SSF52540 331 579 1.02E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 TIGRFAM TIGR00763 lon: endopeptidase La 32 795 5.5E-290 T 29-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 PIRSF PIRSF001174 16 797 1.2E-287 T 29-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CHH28_RS15275 1c51f9f9a2f6de08bf26f1a557360bb4 797 Gene3D G3DSA:1.10.4060.10 141 233 2.6E-12 T 29-03-2018 CHH28_RS16380 acc9c17b690cc2515caeb862de8a3709 465 SUPERFAMILY SSF48557 3 459 3.24E-146 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CHH28_RS16380 acc9c17b690cc2515caeb862de8a3709 465 Pfam PF00206 Lyase 13 341 5.8E-96 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal CHH28_RS16380 acc9c17b690cc2515caeb862de8a3709 465 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 1.8E-26 T 29-03-2018 IPR000362 Fumarate lyase family CHH28_RS16380 acc9c17b690cc2515caeb862de8a3709 465 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 1.8E-26 T 29-03-2018 IPR000362 Fumarate lyase family CHH28_RS16380 acc9c17b690cc2515caeb862de8a3709 465 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 1.8E-26 T 29-03-2018 IPR000362 Fumarate lyase family CHH28_RS16380 acc9c17b690cc2515caeb862de8a3709 465 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 1.8E-26 T 29-03-2018 IPR000362 Fumarate lyase family CHH28_RS16380 acc9c17b690cc2515caeb862de8a3709 465 Gene3D G3DSA:1.10.40.30 416 465 3.1E-20 T 29-03-2018 CHH28_RS16380 acc9c17b690cc2515caeb862de8a3709 465 Pfam PF10415 Fumarase C C-terminus 409 460 5.3E-20 T 29-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CHH28_RS16380 acc9c17b690cc2515caeb862de8a3709 465 Gene3D G3DSA:1.10.275.10 1 138 1.3E-54 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CHH28_RS16380 acc9c17b690cc2515caeb862de8a3709 465 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CHH28_RS16380 acc9c17b690cc2515caeb862de8a3709 465 Gene3D G3DSA:1.20.200.10 139 415 1.2E-75 T 29-03-2018 CHH28_RS00115 bf4d3e606f9a45dd6161aa477e6acb70 534 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 230 510 2.5E-79 T 29-03-2018 IPR013358 Pilus biogenesis, MshL CHH28_RS00115 bf4d3e606f9a45dd6161aa477e6acb70 534 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 456 489 - T 29-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 CHH28_RS00115 bf4d3e606f9a45dd6161aa477e6acb70 534 Pfam PF07655 Secretin N-terminal domain 150 236 1.1E-17 T 29-03-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 CHH28_RS00115 bf4d3e606f9a45dd6161aa477e6acb70 534 Pfam PF00263 Bacterial type II and III secretion system protein 333 510 1.7E-41 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 CHH28_RS00115 bf4d3e606f9a45dd6161aa477e6acb70 534 PRINTS PR00811 Bacterial general secretion pathway protein D signature 329 353 2.0E-19 T 29-03-2018 IPR001775 GspD/PilQ family CHH28_RS00115 bf4d3e606f9a45dd6161aa477e6acb70 534 PRINTS PR00811 Bacterial general secretion pathway protein D signature 498 512 2.0E-19 T 29-03-2018 IPR001775 GspD/PilQ family CHH28_RS00115 bf4d3e606f9a45dd6161aa477e6acb70 534 PRINTS PR00811 Bacterial general secretion pathway protein D signature 265 275 2.0E-19 T 29-03-2018 IPR001775 GspD/PilQ family CHH28_RS00115 bf4d3e606f9a45dd6161aa477e6acb70 534 PRINTS PR00811 Bacterial general secretion pathway protein D signature 475 493 2.0E-19 T 29-03-2018 IPR001775 GspD/PilQ family CHH28_RS00115 bf4d3e606f9a45dd6161aa477e6acb70 534 PRINTS PR00811 Bacterial general secretion pathway protein D signature 367 377 2.0E-19 T 29-03-2018 IPR001775 GspD/PilQ family CHH28_RS18685 a46366322341f3f78a2eb9ca8ae3a703 268 PIRSF PIRSF002884 33 268 8.4E-67 T 29-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 CHH28_RS18685 a46366322341f3f78a2eb9ca8ae3a703 268 SUPERFAMILY SSF75708 46 267 1.31E-54 T 29-03-2018 CHH28_RS18685 a46366322341f3f78a2eb9ca8ae3a703 268 Gene3D G3DSA:1.10.287.500 74 206 1.2E-17 T 29-03-2018 CHH28_RS18685 a46366322341f3f78a2eb9ca8ae3a703 268 Pfam PF04344 Chemotaxis phosphatase, CheZ 56 268 3.7E-65 T 29-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 CHH28_RS18975 e936bccbeb8e9206359cef216cdb4ac2 306 Pfam PF01584 CheW-like domain 21 156 4.6E-32 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS18975 e936bccbeb8e9206359cef216cdb4ac2 306 Gene3D G3DSA:3.40.50.2300 170 306 4.5E-23 T 29-03-2018 CHH28_RS18975 e936bccbeb8e9206359cef216cdb4ac2 306 PIRSF PIRSF002867 1 306 1.9E-103 T 29-03-2018 IPR024181 Chemotaxis response regulator CheV CHH28_RS18975 e936bccbeb8e9206359cef216cdb4ac2 306 SUPERFAMILY SSF52172 178 304 1.99E-23 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS18975 e936bccbeb8e9206359cef216cdb4ac2 306 SMART SM00448 179 300 7.4E-17 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS18975 e936bccbeb8e9206359cef216cdb4ac2 306 SMART SM00260 17 153 5.2E-19 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS18975 e936bccbeb8e9206359cef216cdb4ac2 306 Gene3D G3DSA:2.30.30.40 105 147 1.2E-13 T 29-03-2018 CHH28_RS18975 e936bccbeb8e9206359cef216cdb4ac2 306 Pfam PF00072 Response regulator receiver domain 181 300 2.8E-16 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS18975 e936bccbeb8e9206359cef216cdb4ac2 306 Gene3D G3DSA:2.40.50.180 39 104 5.6E-12 T 29-03-2018 CHH28_RS18975 e936bccbeb8e9206359cef216cdb4ac2 306 SUPERFAMILY SSF50341 16 156 3.01E-34 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS16705 8453ef94e39e295834737349d392d1cc 361 Gene3D G3DSA:1.10.3470.10 2 159 3.3E-4 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CHH28_RS16290 59c5081b6e77f3d400e49f028cb6f82e 237 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 10 210 2.4E-81 T 29-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CHH28_RS16290 59c5081b6e77f3d400e49f028cb6f82e 237 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 202 6.8E-63 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CHH28_RS16290 59c5081b6e77f3d400e49f028cb6f82e 237 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 2 212 26.749 T 29-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CHH28_RS16290 59c5081b6e77f3d400e49f028cb6f82e 237 PIRSF PIRSF006102 2 221 1.1E-73 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CHH28_RS14845 f2bdb14c8fe210de8321a26736032756 116 Pfam PF07238 PilZ domain 15 104 7.0E-12 T 29-03-2018 IPR009875 PilZ domain GO:0035438 CHH28_RS14845 f2bdb14c8fe210de8321a26736032756 116 Gene3D G3DSA:2.40.10.220 30 115 1.7E-8 T 29-03-2018 CHH28_RS05775 cae5ba213fc08e8470347ee3c3ecad72 797 Gene3D G3DSA:1.20.5.100 25 77 2.2E-14 T 29-03-2018 CHH28_RS05775 cae5ba213fc08e8470347ee3c3ecad72 797 Gene3D G3DSA:1.10.3810.10 192 385 2.3E-68 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CHH28_RS05775 cae5ba213fc08e8470347ee3c3ecad72 797 SUPERFAMILY SSF56601 393 756 3.27E-104 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS05775 cae5ba213fc08e8470347ee3c3ecad72 797 SUPERFAMILY SSF56601 342 364 3.27E-104 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS05775 cae5ba213fc08e8470347ee3c3ecad72 797 Pfam PF00912 Transglycosylase 189 360 1.6E-60 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CHH28_RS05775 cae5ba213fc08e8470347ee3c3ecad72 797 Pfam PF14814 Bifunctional transglycosylase second domain 95 177 2.7E-22 T 29-03-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CHH28_RS05775 cae5ba213fc08e8470347ee3c3ecad72 797 Pfam PF00905 Penicillin binding protein transpeptidase domain 456 691 1.6E-20 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CHH28_RS05775 cae5ba213fc08e8470347ee3c3ecad72 797 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 50 744 2.7E-243 T 29-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CHH28_RS05775 cae5ba213fc08e8470347ee3c3ecad72 797 PIRSF PIRSF002799 13 797 7.9E-280 T 29-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CHH28_RS05775 cae5ba213fc08e8470347ee3c3ecad72 797 Gene3D G3DSA:3.30.2060.10 94 179 1.1E-23 T 29-03-2018 CHH28_RS05775 cae5ba213fc08e8470347ee3c3ecad72 797 Gene3D G3DSA:3.40.710.10 386 762 2.0E-91 T 29-03-2018 CHH28_RS05775 cae5ba213fc08e8470347ee3c3ecad72 797 SUPERFAMILY SSF53955 180 381 7.87E-69 T 29-03-2018 IPR023346 Lysozyme-like domain CHH28_RS15760 0d0742a469a18c7714184af007cbf45f 398 SUPERFAMILY SSF161098 87 157 6.93E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS15760 0d0742a469a18c7714184af007cbf45f 398 Gene3D G3DSA:1.10.3720.10 23 193 1.6E-9 T 29-03-2018 CHH28_RS15760 0d0742a469a18c7714184af007cbf45f 398 Gene3D G3DSA:1.10.3720.10 194 398 2.0E-34 T 29-03-2018 CHH28_RS15760 0d0742a469a18c7714184af007cbf45f 398 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 266 393 6.9E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS15760 0d0742a469a18c7714184af007cbf45f 398 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 86 151 6.1E-17 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CHH28_RS15760 0d0742a469a18c7714184af007cbf45f 398 SUPERFAMILY SSF161098 187 378 1.16E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS00435 9b64e8430342caf84608d7093aef96b8 89 Pfam PF00312 Ribosomal protein S15 8 88 1.7E-37 T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS00435 9b64e8430342caf84608d7093aef96b8 89 Gene3D G3DSA:1.10.287.10 2 89 4.3E-35 T 29-03-2018 CHH28_RS00435 9b64e8430342caf84608d7093aef96b8 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 1.1E-38 T 29-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS00435 9b64e8430342caf84608d7093aef96b8 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.622 T 29-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS00435 9b64e8430342caf84608d7093aef96b8 89 SMART SM01387 8 88 1.7E-51 T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS00435 9b64e8430342caf84608d7093aef96b8 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS00435 9b64e8430342caf84608d7093aef96b8 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 6.0E-31 T 29-03-2018 CHH28_RS00435 9b64e8430342caf84608d7093aef96b8 89 SUPERFAMILY SSF47060 3 89 7.65E-36 T 29-03-2018 IPR009068 S15/NS1, RNA-binding CHH28_RS14105 44e3c4aab821ebe5748db07a7d47bcd3 196 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 122 184 8.0E-22 T 29-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CHH28_RS14105 44e3c4aab821ebe5748db07a7d47bcd3 196 SUPERFAMILY SSF89360 4 101 5.89E-20 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CHH28_RS14105 44e3c4aab821ebe5748db07a7d47bcd3 196 Gene3D G3DSA:2.60.300.12 1 104 2.3E-16 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CHH28_RS14105 44e3c4aab821ebe5748db07a7d47bcd3 196 Pfam PF01106 NifU-like domain 115 181 3.0E-19 T 29-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CHH28_RS14105 44e3c4aab821ebe5748db07a7d47bcd3 196 Pfam PF01521 Iron-sulphur cluster biosynthesis 4 101 1.9E-8 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CHH28_RS14105 44e3c4aab821ebe5748db07a7d47bcd3 196 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 5 195 2.1E-89 T 29-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CHH28_RS14105 44e3c4aab821ebe5748db07a7d47bcd3 196 Gene3D G3DSA:3.30.300.130 106 191 1.5E-26 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CHH28_RS14105 44e3c4aab821ebe5748db07a7d47bcd3 196 SUPERFAMILY SSF117916 99 188 4.14E-23 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CHH28_RS14105 44e3c4aab821ebe5748db07a7d47bcd3 196 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 4 195 38.733 T 29-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CHH28_RS08805 de9dd092f5a904ed73904aafcf24773f 334 SUPERFAMILY SSF46689 270 321 1.21E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS08805 de9dd092f5a904ed73904aafcf24773f 334 Pfam PF12833 Helix-turn-helix domain 240 318 3.0E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS08805 de9dd092f5a904ed73904aafcf24773f 334 Gene3D G3DSA:1.10.10.60 266 329 4.9E-14 T 29-03-2018 CHH28_RS08805 de9dd092f5a904ed73904aafcf24773f 334 SMART SM00342 234 316 8.5E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS08805 de9dd092f5a904ed73904aafcf24773f 334 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 316 2.4E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS08805 de9dd092f5a904ed73904aafcf24773f 334 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 300 2.4E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS11740 d16416ab255a902226ef3d1c7ff36c68 589 SUPERFAMILY SSF49363 55 135 1.09E-5 T 29-03-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 CHH28_RS11740 d16416ab255a902226ef3d1c7ff36c68 589 SUPERFAMILY SSF56300 350 378 2.85E-25 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS11740 d16416ab255a902226ef3d1c7ff36c68 589 SUPERFAMILY SSF56300 434 553 2.85E-25 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS11740 d16416ab255a902226ef3d1c7ff36c68 589 SUPERFAMILY SSF56300 148 317 2.85E-25 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS11740 d16416ab255a902226ef3d1c7ff36c68 589 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 50 141 1.9E-33 T 29-03-2018 IPR032093 Phospholipase D, N-terminal CHH28_RS11740 d16416ab255a902226ef3d1c7ff36c68 589 Gene3D G3DSA:2.60.40.380 50 145 1.2E-12 T 29-03-2018 CHH28_RS11740 d16416ab255a902226ef3d1c7ff36c68 589 Pfam PF09423 PhoD-like phosphatase 152 556 1.7E-114 T 29-03-2018 IPR018946 Alkaline phosphatase D-related CHH28_RS11740 d16416ab255a902226ef3d1c7ff36c68 589 Gene3D G3DSA:3.60.21.10 148 588 5.0E-42 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS17550 3f27a3f43191940917cbf4a5eff9ec00 286 Gene3D G3DSA:2.40.160.10 24 286 8.8E-5 T 29-03-2018 CHH28_RS03300 d86affb1a41bfd2b84379b26fc60bca3 398 Gene3D G3DSA:3.50.50.60 1 371 7.8E-45 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS03300 d86affb1a41bfd2b84379b26fc60bca3 398 SUPERFAMILY SSF51905 274 392 2.98E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS03300 d86affb1a41bfd2b84379b26fc60bca3 398 SUPERFAMILY SSF51905 3 182 2.98E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS03300 d86affb1a41bfd2b84379b26fc60bca3 398 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 301 314 - T 29-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 CHH28_RS03300 d86affb1a41bfd2b84379b26fc60bca3 398 Pfam PF01494 FAD binding domain 4 345 2.1E-26 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 CHH28_RS03300 d86affb1a41bfd2b84379b26fc60bca3 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 2.2E-22 T 29-03-2018 CHH28_RS03300 d86affb1a41bfd2b84379b26fc60bca3 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.2E-22 T 29-03-2018 CHH28_RS03300 d86affb1a41bfd2b84379b26fc60bca3 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 161 176 2.2E-22 T 29-03-2018 CHH28_RS03300 d86affb1a41bfd2b84379b26fc60bca3 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 318 2.2E-22 T 29-03-2018 CHH28_RS03300 d86affb1a41bfd2b84379b26fc60bca3 398 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 397 2.6E-120 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CHH28_RS01790 cef07c8c1b176bae9e12095f6d7135c3 689 Pfam PF00563 EAL domain 437 671 2.1E-71 T 29-03-2018 IPR001633 EAL domain CHH28_RS01790 cef07c8c1b176bae9e12095f6d7135c3 689 SMART SM00304 188 241 9.0E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS01790 cef07c8c1b176bae9e12095f6d7135c3 689 Gene3D G3DSA:3.30.70.270 262 428 3.9E-54 T 29-03-2018 CHH28_RS01790 cef07c8c1b176bae9e12095f6d7135c3 689 SUPERFAMILY SSF55073 266 422 7.3E-44 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS01790 cef07c8c1b176bae9e12095f6d7135c3 689 SMART SM00052 431 676 3.8E-99 T 29-03-2018 IPR001633 EAL domain CHH28_RS01790 cef07c8c1b176bae9e12095f6d7135c3 689 Pfam PF00990 Diguanylate cyclase, GGDEF domain 261 416 2.5E-44 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS01790 cef07c8c1b176bae9e12095f6d7135c3 689 SMART SM00267 250 421 5.2E-54 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS01790 cef07c8c1b176bae9e12095f6d7135c3 689 Gene3D G3DSA:3.20.20.450 429 679 1.6E-90 T 29-03-2018 IPR001633 EAL domain CHH28_RS01790 cef07c8c1b176bae9e12095f6d7135c3 689 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 258 419 1.4E-37 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS01790 cef07c8c1b176bae9e12095f6d7135c3 689 SUPERFAMILY SSF141868 437 682 2.35E-81 T 29-03-2018 IPR001633 EAL domain CHH28_RS01420 8785f0601ac58d05ec5dd82f281131e7 148 Gene3D G3DSA:1.10.1510.10 3 91 9.8E-29 T 29-03-2018 CHH28_RS01420 8785f0601ac58d05ec5dd82f281131e7 148 Gene3D G3DSA:1.10.10.410 92 148 3.2E-19 T 29-03-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CHH28_RS01420 8785f0601ac58d05ec5dd82f281131e7 148 SUPERFAMILY SSF89095 4 147 6.8E-43 T 29-03-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CHH28_RS01420 8785f0601ac58d05ec5dd82f281131e7 148 Pfam PF09424 Yqey-like protein 6 147 1.8E-55 T 29-03-2018 IPR019004 Uncharacterised domain YOR215C, mitochondrial CHH28_RS09330 074ed41589195667f8218954c1416f2d 457 SUPERFAMILY SSF103473 14 389 1.44E-62 T 29-03-2018 IPR020846 Major facilitator superfamily domain CHH28_RS09330 074ed41589195667f8218954c1416f2d 457 Gene3D G3DSA:1.20.1250.20 7 201 1.9E-30 T 29-03-2018 CHH28_RS09330 074ed41589195667f8218954c1416f2d 457 Gene3D G3DSA:1.20.1250.20 202 394 1.9E-20 T 29-03-2018 CHH28_RS09330 074ed41589195667f8218954c1416f2d 457 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 87 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CHH28_RS09330 074ed41589195667f8218954c1416f2d 457 Pfam PF07690 Major Facilitator Superfamily 21 355 3.7E-46 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CHH28_RS06915 aa3cdb14a37cbc21a030f3f1e2db44c1 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06915 aa3cdb14a37cbc21a030f3f1e2db44c1 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.839 T 29-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06915 aa3cdb14a37cbc21a030f3f1e2db44c1 148 SUPERFAMILY SSF55658 1 56 4.36E-18 T 29-03-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CHH28_RS06915 aa3cdb14a37cbc21a030f3f1e2db44c1 148 SUPERFAMILY SSF55653 60 148 4.45E-25 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal CHH28_RS06915 aa3cdb14a37cbc21a030f3f1e2db44c1 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 2.8E-22 T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06915 aa3cdb14a37cbc21a030f3f1e2db44c1 148 Gene3D G3DSA:3.40.5.10 1 49 6.9E-23 T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06915 aa3cdb14a37cbc21a030f3f1e2db44c1 148 Gene3D G3DSA:3.10.430.100 63 147 2.0E-25 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal CHH28_RS06915 aa3cdb14a37cbc21a030f3f1e2db44c1 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 8.0E-51 T 29-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06915 aa3cdb14a37cbc21a030f3f1e2db44c1 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 65 146 3.9E-25 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal CHH28_RS19380 8652d6958bb2c4adf4d6972b532d6571 459 Gene3D G3DSA:1.10.10.60 389 459 7.0E-5 T 29-03-2018 CHH28_RS19380 8652d6958bb2c4adf4d6972b532d6571 459 Gene3D G3DSA:3.40.50.2300 2 130 2.8E-28 T 29-03-2018 CHH28_RS19380 8652d6958bb2c4adf4d6972b532d6571 459 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CHH28_RS19380 8652d6958bb2c4adf4d6972b532d6571 459 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CHH28_RS19380 8652d6958bb2c4adf4d6972b532d6571 459 SMART SM00382 156 299 1.4E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS19380 8652d6958bb2c4adf4d6972b532d6571 459 Gene3D G3DSA:3.40.50.300 132 308 1.7E-31 T 29-03-2018 CHH28_RS19380 8652d6958bb2c4adf4d6972b532d6571 459 SUPERFAMILY SSF52540 135 377 7.89E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS19380 8652d6958bb2c4adf4d6972b532d6571 459 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CHH28_RS19380 8652d6958bb2c4adf4d6972b532d6571 459 SUPERFAMILY SSF52172 2 180 4.41E-36 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS19380 8652d6958bb2c4adf4d6972b532d6571 459 Pfam PF00158 Sigma-54 interaction domain 136 302 3.9E-73 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CHH28_RS19380 8652d6958bb2c4adf4d6972b532d6571 459 SMART SM00448 2 108 4.0E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS19380 8652d6958bb2c4adf4d6972b532d6571 459 Gene3D G3DSA:1.10.8.60 309 385 1.4E-21 T 29-03-2018 CHH28_RS19380 8652d6958bb2c4adf4d6972b532d6571 459 Pfam PF00072 Response regulator receiver domain 4 109 9.8E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS03415 3f934c8f7037829d8f73c07fcfe23caf 420 SUPERFAMILY SSF53223 10 161 2.59E-50 T 29-03-2018 CHH28_RS03415 3f934c8f7037829d8f73c07fcfe23caf 420 Pfam PF03949 Malic enzyme, NAD binding domain 165 358 1.4E-25 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CHH28_RS03415 3f934c8f7037829d8f73c07fcfe23caf 420 SMART SM01274 18 151 6.2E-74 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CHH28_RS03415 3f934c8f7037829d8f73c07fcfe23caf 420 Pfam PF00390 Malic enzyme, N-terminal domain 29 150 1.7E-25 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CHH28_RS03415 3f934c8f7037829d8f73c07fcfe23caf 420 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 29-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CHH28_RS03415 3f934c8f7037829d8f73c07fcfe23caf 420 PIRSF PIRSF000106 43 416 1.0E-74 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CHH28_RS03415 3f934c8f7037829d8f73c07fcfe23caf 420 SMART SM00919 163 399 1.3E-140 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CHH28_RS03415 3f934c8f7037829d8f73c07fcfe23caf 420 Gene3D G3DSA:3.40.50.720 161 417 6.8E-81 T 29-03-2018 CHH28_RS03415 3f934c8f7037829d8f73c07fcfe23caf 420 Gene3D G3DSA:3.40.50.10380 5 160 3.6E-35 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CHH28_RS03415 3f934c8f7037829d8f73c07fcfe23caf 420 SUPERFAMILY SSF51735 163 409 5.58E-82 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS04655 a41d94418c0a910d67db30b06f1b74db 304 Pfam PF15575 Immunity protein 49 96 273 1.2E-19 T 29-03-2018 IPR029074 Immunity protein 49 CHH28_RS19285 4950c92b80d7377e19178513c785361a 471 SUPERFAMILY SSF56176 39 224 5.14E-42 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CHH28_RS19285 4950c92b80d7377e19178513c785361a 471 Gene3D G3DSA:3.30.465.10 108 221 2.4E-21 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CHH28_RS19285 4950c92b80d7377e19178513c785361a 471 TIGRFAM TIGR01679 bact_FAD_ox: FAD-linked oxidoreductase 51 470 1.6E-120 T 29-03-2018 CHH28_RS19285 4950c92b80d7377e19178513c785361a 471 PIRSF PIRSF000136 42 471 2.8E-85 T 29-03-2018 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 CHH28_RS19285 4950c92b80d7377e19178513c785361a 471 Pfam PF01565 FAD binding domain 67 194 1.9E-22 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CHH28_RS19285 4950c92b80d7377e19178513c785361a 471 Pfam PF04030 D-arabinono-1,4-lactone oxidase 219 468 6.7E-52 T 29-03-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 CHH28_RS19285 4950c92b80d7377e19178513c785361a 471 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 8 28 8.8E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CHH28_RS19285 4950c92b80d7377e19178513c785361a 471 Gene3D G3DSA:3.30.43.10 44 107 4.0E-13 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CHH28_RS19285 4950c92b80d7377e19178513c785361a 471 Gene3D G3DSA:3.40.462.10 222 437 1.8E-17 T 29-03-2018 IPR016170 Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain CHH28_RS06290 611042cde06c373e7079d91b421924d7 443 Gene3D G3DSA:3.40.309.10 247 425 1.0E-48 T 29-03-2018 CHH28_RS06290 611042cde06c373e7079d91b421924d7 443 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 255 266 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CHH28_RS06290 611042cde06c373e7079d91b421924d7 443 Pfam PF00171 Aldehyde dehydrogenase family 3 438 1.7E-116 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS06290 611042cde06c373e7079d91b421924d7 443 Gene3D G3DSA:3.40.605.10 1 246 1.1E-67 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS06290 611042cde06c373e7079d91b421924d7 443 SUPERFAMILY SSF53720 3 442 2.75E-119 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 SUPERFAMILY SSF47384 317 377 2.79E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 Gene3D G3DSA:1.20.120.160 1 149 2.7E-28 T 29-03-2018 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 Gene3D G3DSA:3.30.565.10 376 562 6.2E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 SUPERFAMILY SSF47226 1 98 1.96E-27 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 SUPERFAMILY SSF50341 561 692 7.85E-33 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 SUPERFAMILY SSF55874 378 560 6.68E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 SMART SM00073 1 98 8.5E-29 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 Pfam PF01627 Hpt domain 3 95 1.1E-17 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 SUPERFAMILY SSF160246 250 306 4.97E-6 T 29-03-2018 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 317 375 1.9E-7 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 Gene3D G3DSA:1.10.287.560 316 375 7.4E-12 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 Gene3D G3DSA:2.40.50.180 600 639 1.1E-10 T 29-03-2018 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 SMART SM00387 421 562 4.1E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 SMART SM00260 554 692 2.5E-32 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 Pfam PF01584 CheW-like domain 568 694 7.3E-27 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 Gene3D G3DSA:2.30.30.40 563 599 0.026 T 29-03-2018 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 Gene3D G3DSA:2.30.30.40 640 692 3.3E-18 T 29-03-2018 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 SMART SM01231 316 376 5.1E-10 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 561 2.4E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 540 7.8E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 516 7.8E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 559 7.8E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS11850 70f389667f5fe9f0d12bc5838910170d 702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 7.8E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS09675 7a7fe852219c56450eda6ae2cfc61bef 222 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 62 220 1.7E-35 T 29-03-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 CHH28_RS09675 7a7fe852219c56450eda6ae2cfc61bef 222 SUPERFAMILY SSF47240 56 137 4.17E-16 T 29-03-2018 IPR009078 Ferritin-like superfamily CHH28_RS09675 7a7fe852219c56450eda6ae2cfc61bef 222 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 21 222 28.158 T 29-03-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 CHH28_RS09675 7a7fe852219c56450eda6ae2cfc61bef 222 Gene3D G3DSA:1.20.1260.10 52 195 2.1E-19 T 29-03-2018 IPR012347 Ferritin-related CHH28_RS01130 c2f27c1a8503d494efd19eb9efde49fd 173 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 14 166 2.1E-35 T 29-03-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CHH28_RS01130 c2f27c1a8503d494efd19eb9efde49fd 173 SUPERFAMILY SSF53271 5 167 1.28E-37 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CHH28_RS01130 c2f27c1a8503d494efd19eb9efde49fd 173 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 173 21.715 T 29-03-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CHH28_RS01130 c2f27c1a8503d494efd19eb9efde49fd 173 Pfam PF00156 Phosphoribosyl transferase domain 39 152 5.2E-13 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CHH28_RS01130 c2f27c1a8503d494efd19eb9efde49fd 173 Gene3D G3DSA:3.40.50.2020 2 170 5.2E-31 T 29-03-2018 CHH28_RS08505 3d4d865d86f86df5d6cee44ed535ca95 311 Pfam PF03466 LysR substrate binding domain 101 303 1.6E-27 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS08505 3d4d865d86f86df5d6cee44ed535ca95 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 75 4.6E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS08505 3d4d865d86f86df5d6cee44ed535ca95 311 Gene3D G3DSA:3.40.190.10 189 277 1.3E-18 T 29-03-2018 CHH28_RS08505 3d4d865d86f86df5d6cee44ed535ca95 311 SUPERFAMILY SSF53850 98 305 6.52E-47 T 29-03-2018 CHH28_RS08505 3d4d865d86f86df5d6cee44ed535ca95 311 Gene3D G3DSA:1.10.10.10 1 97 3.7E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS08505 3d4d865d86f86df5d6cee44ed535ca95 311 SUPERFAMILY SSF46785 14 93 9.53E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS08505 3d4d865d86f86df5d6cee44ed535ca95 311 Gene3D G3DSA:3.40.190.10 98 188 5.2E-20 T 29-03-2018 CHH28_RS16580 c64071ebcfd7660c1347d6d5b8ae7a21 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 16 118 2.8E-18 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CHH28_RS16580 c64071ebcfd7660c1347d6d5b8ae7a21 122 Gene3D G3DSA:2.60.300.12 16 122 2.6E-30 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CHH28_RS16580 c64071ebcfd7660c1347d6d5b8ae7a21 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 17 122 4.2E-29 T 29-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CHH28_RS16580 c64071ebcfd7660c1347d6d5b8ae7a21 122 SUPERFAMILY SSF89360 17 111 1.14E-22 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CHH28_RS08670 2a64e93bb0b2d82b32ff217c7a7f2b84 153 Pfam PF02470 MlaD protein 38 115 1.8E-20 T 29-03-2018 IPR003399 Mce/MlaD CHH28_RS08670 2a64e93bb0b2d82b32ff217c7a7f2b84 153 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 148 2.0E-53 T 29-03-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 CHH28_RS18715 8c22f9d7c68728db3191bfcf6b2253c6 383 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 352 2.4E-127 T 29-03-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 CHH28_RS18715 8c22f9d7c68728db3191bfcf6b2253c6 383 Gene3D G3DSA:3.40.1690.10 219 353 3.8E-56 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CHH28_RS18715 8c22f9d7c68728db3191bfcf6b2253c6 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 4.1E-39 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CHH28_RS18715 8c22f9d7c68728db3191bfcf6b2253c6 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 4.1E-39 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CHH28_RS18715 8c22f9d7c68728db3191bfcf6b2253c6 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 4.1E-39 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CHH28_RS18715 8c22f9d7c68728db3191bfcf6b2253c6 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 4.1E-39 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CHH28_RS18715 8c22f9d7c68728db3191bfcf6b2253c6 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 4.1E-39 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CHH28_RS18715 8c22f9d7c68728db3191bfcf6b2253c6 383 SUPERFAMILY SSF160544 245 352 2.22E-41 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CHH28_RS18715 8c22f9d7c68728db3191bfcf6b2253c6 383 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 1.4E-125 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CHH28_RS07990 e007f75ba91288c82b757f5b66f69618 221 SMART SM00100 5 124 1.8E-26 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS07990 e007f75ba91288c82b757f5b66f69618 221 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 168 184 5.1E-9 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CHH28_RS07990 e007f75ba91288c82b757f5b66f69618 221 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 184 199 5.1E-9 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CHH28_RS07990 e007f75ba91288c82b757f5b66f69618 221 Pfam PF00325 Bacterial regulatory proteins, crp family 168 198 4.2E-15 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CHH28_RS07990 e007f75ba91288c82b757f5b66f69618 221 SMART SM00419 162 210 3.0E-15 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CHH28_RS07990 e007f75ba91288c82b757f5b66f69618 221 Pfam PF00027 Cyclic nucleotide-binding domain 23 112 1.2E-23 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS07990 e007f75ba91288c82b757f5b66f69618 221 Gene3D G3DSA:1.10.10.10 147 212 6.4E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS07990 e007f75ba91288c82b757f5b66f69618 221 SUPERFAMILY SSF51206 13 139 2.23E-35 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CHH28_RS07990 e007f75ba91288c82b757f5b66f69618 221 SUPERFAMILY SSF46785 141 209 1.15E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS07990 e007f75ba91288c82b757f5b66f69618 221 Gene3D G3DSA:2.60.120.10 6 146 3.6E-33 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS07990 e007f75ba91288c82b757f5b66f69618 221 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 72 91 - T 29-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site CHH28_RS07990 e007f75ba91288c82b757f5b66f69618 221 ProSitePatterns PS00042 Crp-type HTH domain signature. 170 193 - T 29-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CHH28_RS19180 2918ba2a0f1c0f5a24b7ad028062a3a1 152 Gene3D G3DSA:1.10.940.10 10 147 8.5E-42 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CHH28_RS19180 2918ba2a0f1c0f5a24b7ad028062a3a1 152 Pfam PF01029 NusB family 16 140 5.2E-36 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CHH28_RS19180 2918ba2a0f1c0f5a24b7ad028062a3a1 152 SUPERFAMILY SSF48013 14 142 1.7E-43 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CHH28_RS19180 2918ba2a0f1c0f5a24b7ad028062a3a1 152 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 13 144 22.682 T 29-03-2018 IPR011605 NusB antitermination factor GO:0006353 CHH28_RS19180 2918ba2a0f1c0f5a24b7ad028062a3a1 152 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 15 141 3.6E-44 T 29-03-2018 IPR011605 NusB antitermination factor GO:0006353 CHH28_RS14770 253d8414fa90ef4d817450765a505a11 269 SUPERFAMILY SSF56219 3 269 7.07E-82 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS14770 253d8414fa90ef4d817450765a505a11 269 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 29-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CHH28_RS14770 253d8414fa90ef4d817450765a505a11 269 Gene3D G3DSA:3.60.10.10 1 269 2.2E-47 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS14770 253d8414fa90ef4d817450765a505a11 269 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 262 5.1E-17 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS14770 253d8414fa90ef4d817450765a505a11 269 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 3 269 1.0E-80 T 29-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CHH28_RS14770 253d8414fa90ef4d817450765a505a11 269 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 29-03-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 CHH28_RS14770 253d8414fa90ef4d817450765a505a11 269 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 4 269 2.4E-92 T 29-03-2018 CHH28_RS00200 99ac3021282b9ba554da0c2874a163a8 363 PIRSF PIRSF006641 1 363 2.3E-156 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CHH28_RS00200 99ac3021282b9ba554da0c2874a163a8 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 3.7E-38 T 29-03-2018 IPR013029 Domain of unknown function DUF933 Reactome: R-HSA-114608 CHH28_RS00200 99ac3021282b9ba554da0c2874a163a8 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 1.9E-22 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS00200 99ac3021282b9ba554da0c2874a163a8 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 8.4E-160 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CHH28_RS00200 99ac3021282b9ba554da0c2874a163a8 363 SUPERFAMILY SSF81271 279 360 1.44E-35 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CHH28_RS00200 99ac3021282b9ba554da0c2874a163a8 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.077 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CHH28_RS00200 99ac3021282b9ba554da0c2874a163a8 363 Gene3D G3DSA:3.40.50.300 1 79 3.7E-8 T 29-03-2018 CHH28_RS00200 99ac3021282b9ba554da0c2874a163a8 363 Gene3D G3DSA:1.10.150.300 110 200 7.3E-26 T 29-03-2018 IPR023192 TGS-like domain Reactome: R-HSA-114608 CHH28_RS00200 99ac3021282b9ba554da0c2874a163a8 363 SUPERFAMILY SSF52540 3 301 4.38E-83 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS00200 99ac3021282b9ba554da0c2874a163a8 363 Gene3D G3DSA:3.10.20.30 263 362 6.3E-45 T 29-03-2018 IPR012675 Beta-grasp domain CHH28_RS00200 99ac3021282b9ba554da0c2874a163a8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.6E-33 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS00200 99ac3021282b9ba554da0c2874a163a8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.6E-33 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS00200 99ac3021282b9ba554da0c2874a163a8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.6E-33 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS00200 99ac3021282b9ba554da0c2874a163a8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.6E-33 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS06850 026233206cf0fa1b9495ce880682ccfc 325 Pfam PF00691 OmpA family 181 279 1.3E-10 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS06850 026233206cf0fa1b9495ce880682ccfc 325 SUPERFAMILY SSF103088 169 285 2.88E-24 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS06850 026233206cf0fa1b9495ce880682ccfc 325 Gene3D G3DSA:3.30.1330.60 122 316 6.8E-36 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS06850 026233206cf0fa1b9495ce880682ccfc 325 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 7 58 1.2E-17 T 29-03-2018 IPR025713 Motility protein B, N-terminal domain CHH28_RS09555 3cca33c2b71c91e3f47c4a3eeac5a480 518 Pfam PF03023 MviN-like protein 36 476 1.2E-141 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CHH28_RS09555 3cca33c2b71c91e3f47c4a3eeac5a480 518 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 11 473 20.262 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CHH28_RS09555 3cca33c2b71c91e3f47c4a3eeac5a480 518 PIRSF PIRSF002869 6 515 1.1E-162 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CHH28_RS09555 3cca33c2b71c91e3f47c4a3eeac5a480 518 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 10 506 7.4E-142 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CHH28_RS09555 3cca33c2b71c91e3f47c4a3eeac5a480 518 PRINTS PR01806 Virulence factor MviN signature 39 58 2.0E-74 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CHH28_RS09555 3cca33c2b71c91e3f47c4a3eeac5a480 518 PRINTS PR01806 Virulence factor MviN signature 163 184 2.0E-74 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CHH28_RS09555 3cca33c2b71c91e3f47c4a3eeac5a480 518 PRINTS PR01806 Virulence factor MviN signature 265 291 2.0E-74 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CHH28_RS09555 3cca33c2b71c91e3f47c4a3eeac5a480 518 PRINTS PR01806 Virulence factor MviN signature 415 432 2.0E-74 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CHH28_RS09555 3cca33c2b71c91e3f47c4a3eeac5a480 518 PRINTS PR01806 Virulence factor MviN signature 139 163 2.0E-74 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CHH28_RS09555 3cca33c2b71c91e3f47c4a3eeac5a480 518 PRINTS PR01806 Virulence factor MviN signature 363 382 2.0E-74 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CHH28_RS09555 3cca33c2b71c91e3f47c4a3eeac5a480 518 PRINTS PR01806 Virulence factor MviN signature 58 74 2.0E-74 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CHH28_RS09020 3186c0dc3e196559db8e6db16ac940f8 354 Gene3D G3DSA:3.40.50.720 23 194 1.7E-18 T 29-03-2018 CHH28_RS09020 3186c0dc3e196559db8e6db16ac940f8 354 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 24 336 3.4E-57 T 29-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CHH28_RS09020 3186c0dc3e196559db8e6db16ac940f8 354 SUPERFAMILY SSF48179 198 335 2.96E-22 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CHH28_RS09020 3186c0dc3e196559db8e6db16ac940f8 354 Gene3D G3DSA:1.10.1040.10 195 344 2.9E-30 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CHH28_RS09020 3186c0dc3e196559db8e6db16ac940f8 354 Pfam PF02558 Ketopantoate reductase PanE/ApbA 25 171 1.3E-28 T 29-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CHH28_RS09020 3186c0dc3e196559db8e6db16ac940f8 354 SUPERFAMILY SSF51735 23 145 3.29E-12 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS09020 3186c0dc3e196559db8e6db16ac940f8 354 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 196 331 1.1E-21 T 29-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CHH28_RS15175 db7d9913bcc014791b8e05195acb05b1 556 SUPERFAMILY SSF47005 250 295 1.83E-11 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CHH28_RS15175 db7d9913bcc014791b8e05195acb05b1 556 Gene3D G3DSA:3.30.559.10 316 556 1.3E-82 T 29-03-2018 CHH28_RS15175 db7d9913bcc014791b8e05195acb05b1 556 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CHH28_RS15175 db7d9913bcc014791b8e05195acb05b1 556 Gene3D G3DSA:3.90.1170.30 180 222 0.0016 T 29-03-2018 CHH28_RS15175 db7d9913bcc014791b8e05195acb05b1 556 Gene3D G3DSA:3.90.1170.30 64 106 5.5E-4 T 29-03-2018 CHH28_RS15175 db7d9913bcc014791b8e05195acb05b1 556 SUPERFAMILY SSF51230 120 210 1.57E-18 T 29-03-2018 IPR011053 Single hybrid motif CHH28_RS15175 db7d9913bcc014791b8e05195acb05b1 556 Gene3D G3DSA:2.40.50.100 2 63 1.9E-13 T 29-03-2018 CHH28_RS15175 db7d9913bcc014791b8e05195acb05b1 556 Gene3D G3DSA:2.40.50.100 107 179 4.4E-12 T 29-03-2018 CHH28_RS15175 db7d9913bcc014791b8e05195acb05b1 556 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 143 172 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CHH28_RS15175 db7d9913bcc014791b8e05195acb05b1 556 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 329 555 6.7E-80 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CHH28_RS15175 db7d9913bcc014791b8e05195acb05b1 556 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 101 556 4.3E-175 T 29-03-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 CHH28_RS15175 db7d9913bcc014791b8e05195acb05b1 556 SUPERFAMILY SSF51230 4 95 5.23E-20 T 29-03-2018 IPR011053 Single hybrid motif CHH28_RS15175 db7d9913bcc014791b8e05195acb05b1 556 Pfam PF00364 Biotin-requiring enzyme 5 75 1.2E-17 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CHH28_RS15175 db7d9913bcc014791b8e05195acb05b1 556 Pfam PF00364 Biotin-requiring enzyme 121 190 3.9E-16 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CHH28_RS15175 db7d9913bcc014791b8e05195acb05b1 556 Gene3D G3DSA:4.10.320.10 247 305 1.3E-16 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CHH28_RS15175 db7d9913bcc014791b8e05195acb05b1 556 Pfam PF02817 e3 binding domain 256 291 2.2E-12 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CHH28_RS15175 db7d9913bcc014791b8e05195acb05b1 556 SUPERFAMILY SSF52777 315 555 3.42E-84 T 29-03-2018 CHH28_RS07355 a1bf5f26daf2e6b1ad53243ffa85b349 1017 PRINTS PR00702 Acriflavin resistance protein family signature 711 734 1.1E-8 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS07355 a1bf5f26daf2e6b1ad53243ffa85b349 1017 PRINTS PR00702 Acriflavin resistance protein family signature 636 660 1.1E-8 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS07355 a1bf5f26daf2e6b1ad53243ffa85b349 1017 PRINTS PR00702 Acriflavin resistance protein family signature 608 629 1.1E-8 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS07355 a1bf5f26daf2e6b1ad53243ffa85b349 1017 PRINTS PR00702 Acriflavin resistance protein family signature 293 317 1.1E-8 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS07355 a1bf5f26daf2e6b1ad53243ffa85b349 1017 SUPERFAMILY SSF82866 526 739 2.09E-28 T 29-03-2018 CHH28_RS07355 a1bf5f26daf2e6b1ad53243ffa85b349 1017 SUPERFAMILY SSF82866 135 349 4.19E-33 T 29-03-2018 CHH28_RS07355 a1bf5f26daf2e6b1ad53243ffa85b349 1017 Gene3D G3DSA:1.20.1640.10 137 351 6.1E-35 T 29-03-2018 CHH28_RS07355 a1bf5f26daf2e6b1ad53243ffa85b349 1017 Gene3D G3DSA:1.20.1640.10 471 744 1.0E-33 T 29-03-2018 CHH28_RS07355 a1bf5f26daf2e6b1ad53243ffa85b349 1017 Gene3D G3DSA:2.50.20.10 777 1015 1.2E-47 T 29-03-2018 CHH28_RS07355 a1bf5f26daf2e6b1ad53243ffa85b349 1017 Pfam PF17131 Outer membrane lipoprotein-sorting protein 827 1015 1.8E-52 T 29-03-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein CHH28_RS07355 a1bf5f26daf2e6b1ad53243ffa85b349 1017 Pfam PF03176 MMPL family 514 735 1.1E-18 T 29-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CHH28_RS07355 a1bf5f26daf2e6b1ad53243ffa85b349 1017 Pfam PF03176 MMPL family 65 365 1.9E-17 T 29-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CHH28_RS07120 72d7dc9b3ec01df6f1e5ca1f58d107a5 189 Gene3D G3DSA:1.10.3210.10 3 188 5.7E-33 T 29-03-2018 CHH28_RS07120 72d7dc9b3ec01df6f1e5ca1f58d107a5 189 Pfam PF13023 HD domain 12 160 1.6E-33 T 29-03-2018 IPR006674 HD domain CHH28_RS07120 72d7dc9b3ec01df6f1e5ca1f58d107a5 189 SUPERFAMILY SSF109604 9 178 9.42E-35 T 29-03-2018 CHH28_RS05135 60004cae7483010dce4a545bad70b865 422 Gene3D G3DSA:1.10.3430.10 5 396 8.0E-107 T 29-03-2018 CHH28_RS05135 60004cae7483010dce4a545bad70b865 422 ProSitePatterns PS01219 Ammonium transporters signature. 176 201 - T 29-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CHH28_RS05135 60004cae7483010dce4a545bad70b865 422 SUPERFAMILY SSF111352 10 396 1.44E-101 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CHH28_RS05135 60004cae7483010dce4a545bad70b865 422 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 10 418 1.5E-208 T 29-03-2018 IPR019879 Ammonium transporter, marine subtype CHH28_RS05135 60004cae7483010dce4a545bad70b865 422 Pfam PF00909 Ammonium Transporter Family 17 415 6.6E-98 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CHH28_RS05450 825b147f206792b29a3159a699585d90 277 Gene3D G3DSA:3.10.310.10 127 264 1.8E-49 T 29-03-2018 CHH28_RS05450 825b147f206792b29a3159a699585d90 277 SUPERFAMILY SSF54506 3 275 1.26E-56 T 29-03-2018 CHH28_RS05450 825b147f206792b29a3159a699585d90 277 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 275 9.3E-92 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CHH28_RS05450 825b147f206792b29a3159a699585d90 277 Gene3D G3DSA:3.10.310.10 1 126 2.4E-48 T 29-03-2018 CHH28_RS05450 825b147f206792b29a3159a699585d90 277 Pfam PF01678 Diaminopimelate epimerase 155 268 1.4E-24 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CHH28_RS05450 825b147f206792b29a3159a699585d90 277 Pfam PF01678 Diaminopimelate epimerase 5 125 4.0E-33 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CHH28_RS05450 825b147f206792b29a3159a699585d90 277 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 277 38.943 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CHH28_RS05450 825b147f206792b29a3159a699585d90 277 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 29-03-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 Gene3D G3DSA:3.30.930.10 230 532 7.6E-122 T 29-03-2018 CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 SUPERFAMILY SSF52954 530 635 7.1E-32 T 29-03-2018 IPR004154 Anticodon-binding CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 SUPERFAMILY SSF81271 3 61 1.37E-14 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 7.0E-223 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 Gene3D G3DSA:3.40.50.800 533 642 2.3E-25 T 29-03-2018 IPR004154 Anticodon-binding CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 2.9E-12 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 322 530 3.3E-45 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 635 33.936 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 SMART SM00863 171 220 1.7E-20 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 SUPERFAMILY SSF55681 244 527 3.19E-98 T 29-03-2018 CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 Pfam PF02824 TGS domain 4 61 2.9E-10 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 Gene3D G3DSA:3.10.20.30 1 64 5.3E-17 T 29-03-2018 IPR012675 Beta-grasp domain CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 Gene3D G3DSA:3.30.980.10 68 229 2.3E-39 T 29-03-2018 CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 SUPERFAMILY SSF55186 64 242 9.81E-63 T 29-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 9.6E-53 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 9.6E-53 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 9.6E-53 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 9.6E-53 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 9.6E-53 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CHH28_RS11885 b26fdb712b14bc4be88e143afa8d46f3 643 Pfam PF03129 Anticodon binding domain 542 631 3.6E-21 T 29-03-2018 IPR004154 Anticodon-binding CHH28_RS06955 950f1081cdefcb9a71afa3c79538de4a 146 SUPERFAMILY SSF55729 1 124 8.14E-22 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS06955 950f1081cdefcb9a71afa3c79538de4a 146 Pfam PF13673 Acetyltransferase (GNAT) domain 45 138 6.4E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS06955 950f1081cdefcb9a71afa3c79538de4a 146 Gene3D G3DSA:3.40.630.30 1 131 8.6E-18 T 29-03-2018 CHH28_RS16685 053812b1906b549e865a346f9ed6191c 292 Gene3D G3DSA:3.10.310.10 2 127 1.7E-23 T 29-03-2018 CHH28_RS16685 053812b1906b549e865a346f9ed6191c 292 Pfam PF02567 Phenazine biosynthesis-like protein 18 279 4.1E-43 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CHH28_RS16685 053812b1906b549e865a346f9ed6191c 292 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 18 280 5.0E-45 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CHH28_RS16685 053812b1906b549e865a346f9ed6191c 292 PIRSF PIRSF016184 15 292 3.1E-57 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CHH28_RS16685 053812b1906b549e865a346f9ed6191c 292 SUPERFAMILY SSF54506 17 264 1.88E-51 T 29-03-2018 CHH28_RS16685 053812b1906b549e865a346f9ed6191c 292 Gene3D G3DSA:3.10.310.10 128 281 2.5E-28 T 29-03-2018 CHH28_RS07650 1f233328928ac5d6e5e4442e443ba0d0 105 SUPERFAMILY SSF54909 4 104 1.02E-31 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CHH28_RS07650 1f233328928ac5d6e5e4442e443ba0d0 105 Gene3D G3DSA:3.30.70.100 10 100 5.9E-23 T 29-03-2018 CHH28_RS07650 1f233328928ac5d6e5e4442e443ba0d0 105 Pfam PF03992 Antibiotic biosynthesis monooxygenase 31 82 2.3E-5 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CHH28_RS17075 074ca1041945080fa5fb4b8b925ebb5b 93 Gene3D G3DSA:3.30.70.100 1 92 6.6E-14 T 29-03-2018 CHH28_RS17075 074ca1041945080fa5fb4b8b925ebb5b 93 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 1.1E-5 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CHH28_RS17075 074ca1041945080fa5fb4b8b925ebb5b 93 SUPERFAMILY SSF54909 1 89 2.39E-14 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CHH28_RS09585 0c2510f6dd4aeb89592e7ded3fb741d1 172 Gene3D G3DSA:3.30.700.10 51 169 9.6E-20 T 29-03-2018 CHH28_RS09585 0c2510f6dd4aeb89592e7ded3fb741d1 172 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 49 69 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS09585 0c2510f6dd4aeb89592e7ded3fb741d1 172 SUPERFAMILY SSF54523 51 157 5.76E-19 T 29-03-2018 CHH28_RS09585 0c2510f6dd4aeb89592e7ded3fb741d1 172 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 72 154 4.9E-14 T 29-03-2018 IPR031982 Type IV minor pilin ComP CHH28_RS09585 0c2510f6dd4aeb89592e7ded3fb741d1 172 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 49 71 5.1E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS09585 0c2510f6dd4aeb89592e7ded3fb741d1 172 Pfam PF07963 Prokaryotic N-terminal methylation motif 46 70 2.3E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS09585 0c2510f6dd4aeb89592e7ded3fb741d1 172 PRINTS PR00813 Bacterial general secretion pathway protein G signature 50 75 1.4E-6 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CHH28_RS09585 0c2510f6dd4aeb89592e7ded3fb741d1 172 PRINTS PR00813 Bacterial general secretion pathway protein G signature 86 104 1.4E-6 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CHH28_RS16625 2af5fefdacd238ae41e599576e33119d 203 Pfam PF01810 LysE type translocator 13 170 2.2E-21 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS16625 2af5fefdacd238ae41e599576e33119d 203 PIRSF PIRSF006324 1 203 2.9E-40 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS10290 0456930f8300f460ffd3804b527cc447 235 Gene3D G3DSA:3.30.1330.60 42 233 3.7E-21 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS10290 0456930f8300f460ffd3804b527cc447 235 Pfam PF00691 OmpA family 95 207 9.1E-7 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS10290 0456930f8300f460ffd3804b527cc447 235 SUPERFAMILY SSF103088 90 219 3.27E-12 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS04145 0a1a606703dda3dd126a1a3bc096d126 665 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 5 663 5.5E-260 T 29-03-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 CHH28_RS04145 0a1a606703dda3dd126a1a3bc096d126 665 ProSitePatterns PS00455 Putative AMP-binding domain signature. 276 287 - T 29-03-2018 IPR020845 AMP-binding, conserved site CHH28_RS04145 0a1a606703dda3dd126a1a3bc096d126 665 Gene3D G3DSA:3.40.50.980 89 281 3.5E-36 T 29-03-2018 CHH28_RS04145 0a1a606703dda3dd126a1a3bc096d126 665 Gene3D G3DSA:3.30.300.30 535 646 4.8E-16 T 29-03-2018 CHH28_RS04145 0a1a606703dda3dd126a1a3bc096d126 665 Pfam PF00501 AMP-binding enzyme 102 538 3.5E-49 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CHH28_RS04145 0a1a606703dda3dd126a1a3bc096d126 665 Pfam PF13193 AMP-binding enzyme C-terminal domain 559 626 4.6E-7 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CHH28_RS04145 0a1a606703dda3dd126a1a3bc096d126 665 Gene3D G3DSA:3.40.50.980 282 437 3.4E-23 T 29-03-2018 CHH28_RS04145 0a1a606703dda3dd126a1a3bc096d126 665 SUPERFAMILY SSF56801 20 655 3.14E-133 T 29-03-2018 CHH28_RS04145 0a1a606703dda3dd126a1a3bc096d126 665 Gene3D G3DSA:2.30.38.10 449 534 1.4E-6 T 29-03-2018 CHH28_RS04145 0a1a606703dda3dd126a1a3bc096d126 665 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 37 92 9.4E-12 T 29-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CHH28_RS04735 257727dc1a7b25abe36b7ad048c68587 296 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 11 294 28.134 T 29-03-2018 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CHH28_RS04735 257727dc1a7b25abe36b7ad048c68587 296 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 16 293 3.2E-95 T 29-03-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CHH28_RS04735 257727dc1a7b25abe36b7ad048c68587 296 Pfam PF01040 UbiA prenyltransferase family 34 277 3.8E-62 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CHH28_RS04735 257727dc1a7b25abe36b7ad048c68587 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 73 95 - T 29-03-2018 IPR030470 UbiA prenyltransferase conserved site CHH28_RS18525 6ee8f47a89ee5831571cadad6f82c226 434 SUPERFAMILY SSF56037 367 409 4.45E-10 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CHH28_RS18525 6ee8f47a89ee5831571cadad6f82c226 434 Pfam PF11734 TilS substrate C-terminal domain 372 412 8.1E-10 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CHH28_RS18525 6ee8f47a89ee5831571cadad6f82c226 434 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 370 405 2.0E-8 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CHH28_RS18525 6ee8f47a89ee5831571cadad6f82c226 434 Pfam PF01171 PP-loop family 25 198 2.9E-54 T 29-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CHH28_RS18525 6ee8f47a89ee5831571cadad6f82c226 434 Gene3D G3DSA:3.40.50.620 14 199 2.1E-38 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS18525 6ee8f47a89ee5831571cadad6f82c226 434 SUPERFAMILY SSF82829 250 324 1.8E-5 T 29-03-2018 CHH28_RS18525 6ee8f47a89ee5831571cadad6f82c226 434 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 24 199 3.4E-53 T 29-03-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CHH28_RS18525 6ee8f47a89ee5831571cadad6f82c226 434 Pfam PF09179 TilS substrate binding domain 254 320 2.6E-5 T 29-03-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CHH28_RS18525 6ee8f47a89ee5831571cadad6f82c226 434 SUPERFAMILY SSF52402 15 229 1.79E-58 T 29-03-2018 CHH28_RS18525 6ee8f47a89ee5831571cadad6f82c226 434 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 15 313 21.467 T 29-03-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CHH28_RS12620 07a80071c332994eeb6d3639db837083 476 Pfam PF01435 Peptidase family M48 66 253 4.3E-33 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CHH28_RS12620 07a80071c332994eeb6d3639db837083 476 Gene3D G3DSA:1.25.40.10 286 472 1.4E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS12620 07a80071c332994eeb6d3639db837083 476 Gene3D G3DSA:3.30.2010.10 53 149 6.7E-18 T 29-03-2018 CHH28_RS12620 07a80071c332994eeb6d3639db837083 476 SUPERFAMILY SSF48452 289 448 1.23E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS11640 9f7f3b0c30dd100f38b02a0206494588 207 Gene3D G3DSA:3.30.1150.10 50 207 1.8E-21 T 29-03-2018 CHH28_RS11640 9f7f3b0c30dd100f38b02a0206494588 207 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 126 204 1.9E-21 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CHH28_RS11640 9f7f3b0c30dd100f38b02a0206494588 207 SUPERFAMILY SSF74653 117 199 1.22E-26 T 29-03-2018 CHH28_RS11640 9f7f3b0c30dd100f38b02a0206494588 207 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 1.2E-14 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CHH28_RS11640 9f7f3b0c30dd100f38b02a0206494588 207 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 1.2E-14 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CHH28_RS11640 9f7f3b0c30dd100f38b02a0206494588 207 PRINTS PR01374 Gram-negative bacterial tonB protein signature 63 73 1.2E-14 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CHH28_RS11640 9f7f3b0c30dd100f38b02a0206494588 207 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 1.2E-14 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CHH28_RS11640 9f7f3b0c30dd100f38b02a0206494588 207 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 202 2.8E-18 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CHH28_RS10385 5f2abf1b8f839169a0d3b0176d4cdfed 163 SUPERFAMILY SSF56420 1 162 7.33E-56 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS10385 5f2abf1b8f839169a0d3b0176d4cdfed 163 Pfam PF01327 Polypeptide deformylase 3 151 6.3E-47 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS10385 5f2abf1b8f839169a0d3b0176d4cdfed 163 Gene3D G3DSA:3.90.45.10 1 163 5.4E-54 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS10385 5f2abf1b8f839169a0d3b0176d4cdfed 163 PRINTS PR01576 Peptide deformylase signature 100 118 1.2E-30 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS10385 5f2abf1b8f839169a0d3b0176d4cdfed 163 PRINTS PR01576 Peptide deformylase signature 88 99 1.2E-30 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS10385 5f2abf1b8f839169a0d3b0176d4cdfed 163 PRINTS PR01576 Peptide deformylase signature 32 61 1.2E-30 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS10385 5f2abf1b8f839169a0d3b0176d4cdfed 163 PRINTS PR01576 Peptide deformylase signature 119 148 1.2E-30 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS10385 5f2abf1b8f839169a0d3b0176d4cdfed 163 Hamap MF_00163 Peptide deformylase [def]. 1 161 29.283 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS10385 5f2abf1b8f839169a0d3b0176d4cdfed 163 PIRSF PIRSF004749 1 163 1.9E-52 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS10385 5f2abf1b8f839169a0d3b0176d4cdfed 163 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 3 159 6.7E-46 T 29-03-2018 IPR023635 Peptide deformylase CHH28_RS14915 47a1ddfd28388895029b011d0d393f48 329 Gene3D G3DSA:3.10.290.10 9 79 8.9E-13 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CHH28_RS14915 47a1ddfd28388895029b011d0d393f48 329 Pfam PF01479 S4 domain 23 68 8.8E-9 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CHH28_RS14915 47a1ddfd28388895029b011d0d393f48 329 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 20 312 1.2E-75 T 29-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS14915 47a1ddfd28388895029b011d0d393f48 329 SUPERFAMILY SSF55120 95 314 6.24E-59 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS14915 47a1ddfd28388895029b011d0d393f48 329 SUPERFAMILY SSF55174 22 74 1.5E-8 T 29-03-2018 CHH28_RS14915 47a1ddfd28388895029b011d0d393f48 329 SMART SM00363 23 82 5.2E-8 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CHH28_RS14915 47a1ddfd28388895029b011d0d393f48 329 Gene3D G3DSA:3.30.2350.10 94 318 3.8E-63 T 29-03-2018 CHH28_RS14915 47a1ddfd28388895029b011d0d393f48 329 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS14915 47a1ddfd28388895029b011d0d393f48 329 Pfam PF00849 RNA pseudouridylate synthase 104 250 5.5E-32 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS07580 e48a2110b77bfd49c1783f0b6d808384 376 Pfam PF17186 Lipocalin-like domain 247 376 2.2E-39 T 29-03-2018 CHH28_RS07580 e48a2110b77bfd49c1783f0b6d808384 376 SUPERFAMILY SSF159245 41 376 1.7E-93 T 29-03-2018 CHH28_RS07580 e48a2110b77bfd49c1783f0b6d808384 376 Pfam PF07143 CrtC N-terminal lipocalin domain 64 244 2.1E-49 T 29-03-2018 IPR010791 AttH domain CHH28_RS07580 e48a2110b77bfd49c1783f0b6d808384 376 Gene3D G3DSA:2.40.370.10 52 247 1.6E-55 T 29-03-2018 IPR023374 AttH-like domain CHH28_RS07580 e48a2110b77bfd49c1783f0b6d808384 376 Gene3D G3DSA:2.40.370.10 248 376 2.1E-38 T 29-03-2018 IPR023374 AttH-like domain CHH28_RS16845 222c14cddff206f9707abd71a4af0963 62 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 6.8E-18 T 29-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CHH28_RS16845 222c14cddff206f9707abd71a4af0963 62 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 55 5.5E-20 T 29-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 Gene3D G3DSA:3.30.2090.10 183 271 4.8E-13 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 SUPERFAMILY SSF82714 185 266 2.49E-13 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 SUPERFAMILY SSF82866 799 1042 1.05E-41 T 29-03-2018 CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 Gene3D G3DSA:3.30.2090.10 717 803 1.6E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1041 0.0 T 29-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 Gene3D G3DSA:3.30.70.1430 561 659 6.9E-10 T 29-03-2018 CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 Pfam PF00873 AcrB/AcrD/AcrF family 5 1038 1.6E-228 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 SUPERFAMILY SSF82866 294 499 9.29E-40 T 29-03-2018 CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 SUPERFAMILY SSF82714 717 800 1.57E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 Gene3D G3DSA:3.30.70.1430 45 143 2.3E-20 T 29-03-2018 CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 Gene3D G3DSA:1.20.1640.10 287 511 5.5E-45 T 29-03-2018 CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 Gene3D G3DSA:1.20.1640.10 825 1052 6.1E-35 T 29-03-2018 CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 SUPERFAMILY SSF82693 271 328 2.09E-24 T 29-03-2018 CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 SUPERFAMILY SSF82693 137 184 2.09E-24 T 29-03-2018 CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 5.1E-31 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 5.1E-31 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 5.1E-31 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 5.1E-31 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 5.1E-31 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 PRINTS PR00702 Acriflavin resistance protein family signature 546 563 5.1E-31 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 5.1E-31 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS19720 ca9963446a8ef174488381a4a81466f6 1052 SUPERFAMILY SSF82693 46 127 6.54E-21 T 29-03-2018 CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 Gene3D G3DSA:3.30.2090.10 183 271 4.8E-13 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 SUPERFAMILY SSF82714 185 266 2.49E-13 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 SUPERFAMILY SSF82866 799 1042 1.05E-41 T 29-03-2018 CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 Gene3D G3DSA:3.30.2090.10 717 803 1.6E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1041 0.0 T 29-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 Gene3D G3DSA:3.30.70.1430 561 659 6.9E-10 T 29-03-2018 CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 Pfam PF00873 AcrB/AcrD/AcrF family 5 1038 1.6E-228 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 SUPERFAMILY SSF82866 294 499 9.29E-40 T 29-03-2018 CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 SUPERFAMILY SSF82714 717 800 1.57E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 Gene3D G3DSA:3.30.70.1430 45 143 2.3E-20 T 29-03-2018 CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 Gene3D G3DSA:1.20.1640.10 287 511 5.5E-45 T 29-03-2018 CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 Gene3D G3DSA:1.20.1640.10 825 1052 6.1E-35 T 29-03-2018 CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 SUPERFAMILY SSF82693 271 328 2.09E-24 T 29-03-2018 CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 SUPERFAMILY SSF82693 137 184 2.09E-24 T 29-03-2018 CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 5.1E-31 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 5.1E-31 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 5.1E-31 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 5.1E-31 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 5.1E-31 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 PRINTS PR00702 Acriflavin resistance protein family signature 546 563 5.1E-31 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 5.1E-31 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS00015 ca9963446a8ef174488381a4a81466f6 1052 SUPERFAMILY SSF82693 46 127 6.54E-21 T 29-03-2018 CHH28_RS14740 3ee732403692ef37851d5967ea9b8810 105 Gene3D G3DSA:1.10.287.100 64 99 1.6E-7 T 29-03-2018 CHH28_RS14740 3ee732403692ef37851d5967ea9b8810 105 SUPERFAMILY SSF46785 2 63 8.44E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS14740 3ee732403692ef37851d5967ea9b8810 105 Gene3D G3DSA:1.10.10.10 1 63 9.1E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS14740 3ee732403692ef37851d5967ea9b8810 105 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 55 6.5E-13 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS14740 3ee732403692ef37851d5967ea9b8810 105 SMART SM00345 2 55 1.0E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS14475 8d030c990301ca41b54db12678dbca3b 446 PIRSF PIRSF000124 1 443 3.6E-150 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CHH28_RS14475 8d030c990301ca41b54db12678dbca3b 446 SUPERFAMILY SSF48179 205 302 2.04E-33 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CHH28_RS14475 8d030c990301ca41b54db12678dbca3b 446 SUPERFAMILY SSF51735 2 196 1.53E-56 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS14475 8d030c990301ca41b54db12678dbca3b 446 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 297 1.1E-37 T 29-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CHH28_RS14475 8d030c990301ca41b54db12678dbca3b 446 Gene3D G3DSA:1.20.5.100 206 228 1.7E-14 T 29-03-2018 CHH28_RS14475 8d030c990301ca41b54db12678dbca3b 446 PIRSF PIRSF500134 1 446 1.8E-193 T 29-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CHH28_RS14475 8d030c990301ca41b54db12678dbca3b 446 Gene3D G3DSA:3.40.50.720 2 203 3.9E-61 T 29-03-2018 CHH28_RS14475 8d030c990301ca41b54db12678dbca3b 446 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2 188 1.0E-66 T 29-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CHH28_RS14475 8d030c990301ca41b54db12678dbca3b 446 Gene3D G3DSA:3.40.50.720 229 440 1.9E-73 T 29-03-2018 CHH28_RS14475 8d030c990301ca41b54db12678dbca3b 446 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 428 2.8E-31 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CHH28_RS14475 8d030c990301ca41b54db12678dbca3b 446 SUPERFAMILY SSF52413 306 438 1.57E-37 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CHH28_RS14475 8d030c990301ca41b54db12678dbca3b 446 SMART SM00984 320 428 1.7E-49 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CHH28_RS14475 8d030c990301ca41b54db12678dbca3b 446 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 2 424 9.9E-141 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CHH28_RS17965 ebe86c7f6b1a89858159239298b34736 211 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.0E-10 T 29-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CHH28_RS17965 ebe86c7f6b1a89858159239298b34736 211 Gene3D G3DSA:1.10.1670.10 118 211 8.0E-33 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CHH28_RS17965 ebe86c7f6b1a89858159239298b34736 211 TIGRFAM TIGR01083 nth: endonuclease III 4 194 6.8E-88 T 29-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CHH28_RS17965 ebe86c7f6b1a89858159239298b34736 211 Gene3D G3DSA:1.10.340.30 24 117 2.3E-23 T 29-03-2018 CHH28_RS17965 ebe86c7f6b1a89858159239298b34736 211 SMART SM00525 186 206 1.3E-4 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CHH28_RS17965 ebe86c7f6b1a89858159239298b34736 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 29-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CHH28_RS17965 ebe86c7f6b1a89858159239298b34736 211 PIRSF PIRSF001435 1 211 1.7E-53 T 29-03-2018 CHH28_RS17965 ebe86c7f6b1a89858159239298b34736 211 SUPERFAMILY SSF48150 2 208 4.4E-73 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CHH28_RS17965 ebe86c7f6b1a89858159239298b34736 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 5.0E-4 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CHH28_RS17965 ebe86c7f6b1a89858159239298b34736 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 8.7E-19 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CHH28_RS17965 ebe86c7f6b1a89858159239298b34736 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.953 T 29-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CHH28_RS17965 ebe86c7f6b1a89858159239298b34736 211 SMART SM00478 38 185 4.2E-58 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CHH28_RS14380 02f18eb206e054f26f7421f14e8d0960 609 Pfam PF01541 GIY-YIG catalytic domain 17 89 1.1E-9 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CHH28_RS14380 02f18eb206e054f26f7421f14e8d0960 609 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 383 537 7.7E-45 T 29-03-2018 IPR001162 UvrC family homology region CHH28_RS14380 02f18eb206e054f26f7421f14e8d0960 609 SUPERFAMILY SSF82771 17 99 5.75E-22 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CHH28_RS14380 02f18eb206e054f26f7421f14e8d0960 609 Pfam PF14520 Helix-hairpin-helix domain 555 600 1.1E-8 T 29-03-2018 CHH28_RS14380 02f18eb206e054f26f7421f14e8d0960 609 Pfam PF02151 UvrB/uvrC motif 203 234 9.3E-9 T 29-03-2018 IPR001943 UVR domain GO:0005515 CHH28_RS14380 02f18eb206e054f26f7421f14e8d0960 609 SMART SM00278 551 570 89.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CHH28_RS14380 02f18eb206e054f26f7421f14e8d0960 609 SMART SM00278 583 602 0.047 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CHH28_RS14380 02f18eb206e054f26f7421f14e8d0960 609 Gene3D G3DSA:3.40.1440.10 4 100 1.8E-21 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CHH28_RS14380 02f18eb206e054f26f7421f14e8d0960 609 Gene3D G3DSA:4.10.860.10 180 237 2.4E-13 T 29-03-2018 IPR001943 UVR domain GO:0005515 CHH28_RS14380 02f18eb206e054f26f7421f14e8d0960 609 SMART SM00465 16 97 4.5E-21 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CHH28_RS14380 02f18eb206e054f26f7421f14e8d0960 609 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 584 1.7E-166 T 29-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CHH28_RS14380 02f18eb206e054f26f7421f14e8d0960 609 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 602 26.507 T 29-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CHH28_RS14380 02f18eb206e054f26f7421f14e8d0960 609 SUPERFAMILY SSF46600 190 241 6.54E-12 T 29-03-2018 IPR001943 UVR domain GO:0005515 CHH28_RS14380 02f18eb206e054f26f7421f14e8d0960 609 SUPERFAMILY SSF47781 519 605 1.21E-20 T 29-03-2018 IPR010994 RuvA domain 2-like CHH28_RS14380 02f18eb206e054f26f7421f14e8d0960 609 Gene3D G3DSA:1.10.150.20 549 609 4.6E-13 T 29-03-2018 CHH28_RS06445 70332f8943150a07c226c42c5d9b4d13 509 SUPERFAMILY SSF52096 160 236 2.98E-39 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS06445 70332f8943150a07c226c42c5d9b4d13 509 SUPERFAMILY SSF52096 275 499 2.98E-39 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS06445 70332f8943150a07c226c42c5d9b4d13 509 SMART SM00245 272 477 8.8E-9 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CHH28_RS06445 70332f8943150a07c226c42c5d9b4d13 509 Gene3D G3DSA:3.90.226.10 287 506 3.5E-35 T 29-03-2018 CHH28_RS06445 70332f8943150a07c226c42c5d9b4d13 509 Gene3D G3DSA:3.30.750.44 158 250 2.4E-5 T 29-03-2018 CHH28_RS06445 70332f8943150a07c226c42c5d9b4d13 509 Pfam PF03572 Peptidase family S41 303 473 4.0E-27 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CHH28_RS00285 9806a9f3644e458983e38f10b413e5f1 411 Pfam PF14450 Cell division protein FtsA 207 374 7.7E-27 T 29-03-2018 CHH28_RS00285 9806a9f3644e458983e38f10b413e5f1 411 Pfam PF14450 Cell division protein FtsA 11 193 4.7E-12 T 29-03-2018 CHH28_RS00285 9806a9f3644e458983e38f10b413e5f1 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 10 377 1.2E-160 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CHH28_RS00285 9806a9f3644e458983e38f10b413e5f1 411 Gene3D G3DSA:3.30.420.40 1 187 5.6E-40 T 29-03-2018 CHH28_RS00285 9806a9f3644e458983e38f10b413e5f1 411 SUPERFAMILY SSF53067 9 197 5.4E-63 T 29-03-2018 CHH28_RS00285 9806a9f3644e458983e38f10b413e5f1 411 SUPERFAMILY SSF53067 198 377 2.35E-52 T 29-03-2018 CHH28_RS00285 9806a9f3644e458983e38f10b413e5f1 411 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 8.8E-35 T 29-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CHH28_RS00285 9806a9f3644e458983e38f10b413e5f1 411 Gene3D G3DSA:3.30.420.40 197 257 3.0E-8 T 29-03-2018 CHH28_RS00285 9806a9f3644e458983e38f10b413e5f1 411 Gene3D G3DSA:3.30.420.40 258 352 3.9E-20 T 29-03-2018 CHH28_RS00285 9806a9f3644e458983e38f10b413e5f1 411 PIRSF PIRSF003101 1 411 3.4E-163 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CHH28_RS00285 9806a9f3644e458983e38f10b413e5f1 411 SMART SM00842 10 196 2.3E-105 T 29-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CHH28_RS00285 9806a9f3644e458983e38f10b413e5f1 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 411 32.186 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CHH28_RS06045 b826f82b43e5e7031ef6ca24abc45f53 229 SUPERFAMILY SSF54821 108 206 3.53E-41 T 29-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06045 b826f82b43e5e7031ef6ca24abc45f53 229 SUPERFAMILY SSF54814 2 106 3.66E-38 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CHH28_RS06045 b826f82b43e5e7031ef6ca24abc45f53 229 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 29-03-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06045 b826f82b43e5e7031ef6ca24abc45f53 229 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.65 T 29-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CHH28_RS06045 b826f82b43e5e7031ef6ca24abc45f53 229 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 3.7E-98 T 29-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CHH28_RS06045 b826f82b43e5e7031ef6ca24abc45f53 229 Gene3D G3DSA:3.30.1140.32 108 207 4.4E-41 T 29-03-2018 CHH28_RS06045 b826f82b43e5e7031ef6ca24abc45f53 229 Gene3D G3DSA:3.30.300.20 17 107 9.2E-28 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CHH28_RS06045 b826f82b43e5e7031ef6ca24abc45f53 229 Pfam PF07650 KH domain 38 110 1.3E-19 T 29-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06045 b826f82b43e5e7031ef6ca24abc45f53 229 SMART SM00322 60 125 2.3E-8 T 29-03-2018 IPR004087 K Homology domain GO:0003676 CHH28_RS06045 b826f82b43e5e7031ef6ca24abc45f53 229 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.0E-41 T 29-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS17680 b768e34c43eedecff855245917801955 221 SUPERFAMILY SSF56784 8 217 1.29E-50 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS17680 b768e34c43eedecff855245917801955 221 Gene3D G3DSA:3.40.50.1000 1 33 0.14 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS17680 b768e34c43eedecff855245917801955 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 186 2.9E-33 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS17680 b768e34c43eedecff855245917801955 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 186 9.7E-9 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS17680 b768e34c43eedecff855245917801955 221 Gene3D G3DSA:1.10.150.240 34 78 5.8E-6 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CHH28_RS17680 b768e34c43eedecff855245917801955 221 Gene3D G3DSA:3.40.50.1000 79 221 6.6E-33 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS17680 b768e34c43eedecff855245917801955 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 85 181 2.2E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS02615 3682e9b8352ee86f6479c22af5809b31 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS02615 3682e9b8352ee86f6479c22af5809b31 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS02615 3682e9b8352ee86f6479c22af5809b31 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS02615 3682e9b8352ee86f6479c22af5809b31 293 Gene3D G3DSA:3.40.190.10 170 261 9.5E-5 T 29-03-2018 CHH28_RS02615 3682e9b8352ee86f6479c22af5809b31 293 Gene3D G3DSA:3.40.190.10 88 169 1.4E-8 T 29-03-2018 CHH28_RS02615 3682e9b8352ee86f6479c22af5809b31 293 SUPERFAMILY SSF53850 90 288 1.71E-22 T 29-03-2018 CHH28_RS02615 3682e9b8352ee86f6479c22af5809b31 293 Gene3D G3DSA:1.10.10.10 1 87 4.8E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS02615 3682e9b8352ee86f6479c22af5809b31 293 Pfam PF03466 LysR substrate binding domain 88 287 4.8E-23 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS02615 3682e9b8352ee86f6479c22af5809b31 293 SUPERFAMILY SSF46785 5 85 5.07E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS02615 3682e9b8352ee86f6479c22af5809b31 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 9.9E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS01750 86a5e1059afd668a651e47806d13aa8b 803 SMART SM00086 311 353 4.4E-8 T 29-03-2018 IPR001610 PAC motif CHH28_RS01750 86a5e1059afd668a651e47806d13aa8b 803 Pfam PF00990 Diguanylate cyclase, GGDEF domain 364 521 1.4E-53 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS01750 86a5e1059afd668a651e47806d13aa8b 803 SMART SM00091 239 305 2.4E-5 T 29-03-2018 IPR000014 PAS domain CHH28_RS01750 86a5e1059afd668a651e47806d13aa8b 803 SMART SM00267 353 525 6.4E-72 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS01750 86a5e1059afd668a651e47806d13aa8b 803 SUPERFAMILY SSF55073 369 527 8.24E-54 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS01750 86a5e1059afd668a651e47806d13aa8b 803 Pfam PF00563 EAL domain 541 778 3.3E-76 T 29-03-2018 IPR001633 EAL domain CHH28_RS01750 86a5e1059afd668a651e47806d13aa8b 803 SMART SM00304 179 232 0.0016 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS01750 86a5e1059afd668a651e47806d13aa8b 803 Gene3D G3DSA:3.20.20.450 534 797 6.8E-101 T 29-03-2018 IPR001633 EAL domain CHH28_RS01750 86a5e1059afd668a651e47806d13aa8b 803 SUPERFAMILY SSF141868 540 793 2.88E-90 T 29-03-2018 IPR001633 EAL domain CHH28_RS01750 86a5e1059afd668a651e47806d13aa8b 803 Gene3D G3DSA:3.30.450.20 184 365 4.8E-33 T 29-03-2018 CHH28_RS01750 86a5e1059afd668a651e47806d13aa8b 803 Pfam PF17152 Periplasmic sensor domain 41 141 4.3E-17 T 29-03-2018 IPR033417 Periplasmic sensor domain CHASE8 CHH28_RS01750 86a5e1059afd668a651e47806d13aa8b 803 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 360 523 3.1E-47 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS01750 86a5e1059afd668a651e47806d13aa8b 803 Pfam PF08448 PAS fold 248 354 6.8E-14 T 29-03-2018 IPR013656 PAS fold-4 CHH28_RS01750 86a5e1059afd668a651e47806d13aa8b 803 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 236 357 2.0E-17 T 29-03-2018 IPR000014 PAS domain CHH28_RS01750 86a5e1059afd668a651e47806d13aa8b 803 SMART SM00052 535 783 8.3E-118 T 29-03-2018 IPR001633 EAL domain CHH28_RS01750 86a5e1059afd668a651e47806d13aa8b 803 SUPERFAMILY SSF55785 231 351 1.92E-23 T 29-03-2018 IPR000014 PAS domain CHH28_RS01750 86a5e1059afd668a651e47806d13aa8b 803 Gene3D G3DSA:3.30.70.270 366 533 3.8E-62 T 29-03-2018 CHH28_RS10260 2c002832703e24ed29aef6ddc6145214 356 Pfam PF12158 Protein of unknown function (DUF3592) 20 159 2.2E-6 T 29-03-2018 IPR021994 Protein of unknown function DUF3592 CHH28_RS00100 4dd8f81bf2ae4fcf3137adfe2a82a7d3 569 Gene3D G3DSA:3.40.50.300 290 569 7.5E-67 T 29-03-2018 CHH28_RS00100 4dd8f81bf2ae4fcf3137adfe2a82a7d3 569 SUPERFAMILY SSF160246 7 146 1.31E-38 T 29-03-2018 CHH28_RS00100 4dd8f81bf2ae4fcf3137adfe2a82a7d3 569 SMART SM00382 317 438 1.3E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS00100 4dd8f81bf2ae4fcf3137adfe2a82a7d3 569 Pfam PF00437 Type II/IV secretion system protein 195 456 1.2E-82 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CHH28_RS00100 4dd8f81bf2ae4fcf3137adfe2a82a7d3 569 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 384 398 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CHH28_RS00100 4dd8f81bf2ae4fcf3137adfe2a82a7d3 569 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 45 151 1.0E-23 T 29-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 CHH28_RS00100 4dd8f81bf2ae4fcf3137adfe2a82a7d3 569 Gene3D G3DSA:3.30.450.90 164 289 1.6E-44 T 29-03-2018 CHH28_RS00100 4dd8f81bf2ae4fcf3137adfe2a82a7d3 569 SUPERFAMILY SSF52540 179 563 1.89E-100 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS02500 ce9c310eb7bcab76686475bbf98dafa5 136 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 7.0E-21 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CHH28_RS02500 ce9c310eb7bcab76686475bbf98dafa5 136 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 7.0E-21 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CHH28_RS02500 ce9c310eb7bcab76686475bbf98dafa5 136 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 7.0E-21 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CHH28_RS02500 ce9c310eb7bcab76686475bbf98dafa5 136 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 135 16.178 T 29-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CHH28_RS02500 ce9c310eb7bcab76686475bbf98dafa5 136 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 67 6.9E-25 T 29-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CHH28_RS02500 ce9c310eb7bcab76686475bbf98dafa5 136 Pfam PF02416 mttA/Hcf106 family 4 49 1.4E-7 T 29-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CHH28_RS14370 a0a9e30e1c68081a0a9203cc245300d4 904 SUPERFAMILY SSF56059 496 696 5.02E-7 T 29-03-2018 CHH28_RS14370 a0a9e30e1c68081a0a9203cc245300d4 904 Pfam PF13549 ATP-grasp domain 486 694 1.0E-34 T 29-03-2018 CHH28_RS14370 a0a9e30e1c68081a0a9203cc245300d4 904 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 157 294 1.3E-31 T 29-03-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain CHH28_RS14370 a0a9e30e1c68081a0a9203cc245300d4 904 SMART SM00881 9 105 1.0E-28 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CHH28_RS14370 a0a9e30e1c68081a0a9203cc245300d4 904 Gene3D G3DSA:3.40.50.261 140 301 1.7E-28 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CHH28_RS14370 a0a9e30e1c68081a0a9203cc245300d4 904 SUPERFAMILY SSF51735 2 143 6.75E-28 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS14370 a0a9e30e1c68081a0a9203cc245300d4 904 Gene3D G3DSA:3.40.50.720 1 139 7.0E-32 T 29-03-2018 CHH28_RS14370 a0a9e30e1c68081a0a9203cc245300d4 904 SUPERFAMILY SSF52210 136 298 7.33E-27 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CHH28_RS14370 a0a9e30e1c68081a0a9203cc245300d4 904 Pfam PF13380 CoA binding domain 14 140 3.3E-17 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CHH28_RS14370 a0a9e30e1c68081a0a9203cc245300d4 904 Gene3D G3DSA:3.40.630.30 731 902 8.4E-25 T 29-03-2018 CHH28_RS14370 a0a9e30e1c68081a0a9203cc245300d4 904 SUPERFAMILY SSF55729 706 874 2.27E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS14370 a0a9e30e1c68081a0a9203cc245300d4 904 Pfam PF00583 Acetyltransferase (GNAT) family 773 872 1.1E-10 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS14370 a0a9e30e1c68081a0a9203cc245300d4 904 Gene3D G3DSA:3.40.50.261 302 462 1.1E-30 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CHH28_RS14370 a0a9e30e1c68081a0a9203cc245300d4 904 Gene3D G3DSA:3.30.470.20 564 713 9.2E-17 T 29-03-2018 CHH28_RS14370 a0a9e30e1c68081a0a9203cc245300d4 904 SUPERFAMILY SSF52210 302 457 1.7E-30 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CHH28_RS09305 205079fb8e8e5dcafc1599d04b6d4579 553 Gene3D G3DSA:3.40.50.300 12 289 6.8E-54 T 29-03-2018 CHH28_RS09305 205079fb8e8e5dcafc1599d04b6d4579 553 Gene3D G3DSA:3.40.50.300 290 552 1.6E-58 T 29-03-2018 CHH28_RS09305 205079fb8e8e5dcafc1599d04b6d4579 553 SUPERFAMILY SSF52540 10 244 2.23E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09305 205079fb8e8e5dcafc1599d04b6d4579 553 SUPERFAMILY SSF52540 309 509 1.67E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09305 205079fb8e8e5dcafc1599d04b6d4579 553 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS09305 205079fb8e8e5dcafc1599d04b6d4579 553 Pfam PF00005 ABC transporter 22 191 6.1E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS09305 205079fb8e8e5dcafc1599d04b6d4579 553 Pfam PF00005 ABC transporter 340 473 1.4E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS09305 205079fb8e8e5dcafc1599d04b6d4579 553 Pfam PF12848 ABC transporter 230 303 7.2E-14 T 29-03-2018 IPR032781 ABC-transporter extension domain CHH28_RS09305 205079fb8e8e5dcafc1599d04b6d4579 553 SMART SM00382 31 236 1.0E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS09305 205079fb8e8e5dcafc1599d04b6d4579 553 SMART SM00382 348 526 1.8E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS09305 205079fb8e8e5dcafc1599d04b6d4579 553 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 552 2.6E-291 T 29-03-2018 IPR022374 ABC transporter, ATP-binding protein, ChvD CHH28_RS15780 8d62dd464cbb36700691d64feedb7ad3 635 Pfam PF02743 Cache domain 45 265 1.0E-12 T 29-03-2018 IPR033479 Double Cache domain 1 CHH28_RS15780 8d62dd464cbb36700691d64feedb7ad3 635 Gene3D G3DSA:1.10.287.1060 332 411 3.0E-7 T 29-03-2018 CHH28_RS15780 8d62dd464cbb36700691d64feedb7ad3 635 Pfam PF00672 HAMP domain 304 353 2.4E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS15780 8d62dd464cbb36700691d64feedb7ad3 635 Gene3D G3DSA:1.10.287.950 412 635 2.9E-51 T 29-03-2018 CHH28_RS15780 8d62dd464cbb36700691d64feedb7ad3 635 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 418 600 3.4E-42 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS15780 8d62dd464cbb36700691d64feedb7ad3 635 Gene3D G3DSA:3.30.450.20 173 282 2.2E-11 T 29-03-2018 CHH28_RS15780 8d62dd464cbb36700691d64feedb7ad3 635 SMART SM00304 303 357 6.5E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS15780 8d62dd464cbb36700691d64feedb7ad3 635 SMART SM00304 392 459 60.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS15780 8d62dd464cbb36700691d64feedb7ad3 635 SUPERFAMILY SSF58104 325 634 7.85E-76 T 29-03-2018 CHH28_RS15780 8d62dd464cbb36700691d64feedb7ad3 635 Gene3D G3DSA:3.30.450.20 66 172 2.7E-7 T 29-03-2018 CHH28_RS15780 8d62dd464cbb36700691d64feedb7ad3 635 SMART SM00283 372 634 3.8E-83 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS02770 236c2933e231dd4e73a577dba215304c 263 SUPERFAMILY SSF56784 37 263 5.12E-38 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS02770 236c2933e231dd4e73a577dba215304c 263 Pfam PF13419 Haloacid dehalogenase-like hydrolase 41 236 7.7E-25 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS02770 236c2933e231dd4e73a577dba215304c 263 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 138 231 6.1E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS02770 236c2933e231dd4e73a577dba215304c 263 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 38 49 1.2E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS02770 236c2933e231dd4e73a577dba215304c 263 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 198 218 1.2E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS02770 236c2933e231dd4e73a577dba215304c 263 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 162 1.2E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS02770 236c2933e231dd4e73a577dba215304c 263 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 180 196 1.2E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS02770 236c2933e231dd4e73a577dba215304c 263 Gene3D G3DSA:3.40.50.1000 33 261 6.1E-33 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS07250 236bedfac40322c63c9205d1427e75df 188 SUPERFAMILY SSF52218 1 184 8.26E-43 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS07250 236bedfac40322c63c9205d1427e75df 188 Gene3D G3DSA:3.40.50.360 1 188 4.4E-36 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS07250 236bedfac40322c63c9205d1427e75df 188 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CHH28_RS07250 236bedfac40322c63c9205d1427e75df 188 Pfam PF03358 NADPH-dependent FMN reductase 2 129 1.4E-15 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CHH28_RS09995 5aa5a75cfcea6edf9c9c872b137f1ba8 322 SUPERFAMILY SSF53474 46 319 2.26E-60 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS09995 5aa5a75cfcea6edf9c9c872b137f1ba8 322 Pfam PF00561 alpha/beta hydrolase fold 71 305 8.4E-26 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS09995 5aa5a75cfcea6edf9c9c872b137f1ba8 322 PRINTS PR00412 Epoxide hydrolase signature 262 278 1.2E-9 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CHH28_RS09995 5aa5a75cfcea6edf9c9c872b137f1ba8 322 PRINTS PR00412 Epoxide hydrolase signature 295 317 1.2E-9 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CHH28_RS09995 5aa5a75cfcea6edf9c9c872b137f1ba8 322 PRINTS PR00412 Epoxide hydrolase signature 95 110 1.2E-9 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CHH28_RS09995 5aa5a75cfcea6edf9c9c872b137f1ba8 322 PRINTS PR00412 Epoxide hydrolase signature 154 167 1.2E-9 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CHH28_RS09995 5aa5a75cfcea6edf9c9c872b137f1ba8 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 140 153 6.2E-19 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS09995 5aa5a75cfcea6edf9c9c872b137f1ba8 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 110 6.2E-19 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS09995 5aa5a75cfcea6edf9c9c872b137f1ba8 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 264 278 6.2E-19 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS09995 5aa5a75cfcea6edf9c9c872b137f1ba8 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 154 167 6.2E-19 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS09995 5aa5a75cfcea6edf9c9c872b137f1ba8 322 Gene3D G3DSA:3.40.50.1820 26 322 3.3E-48 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS16800 8f0828768c8efdd7c30af063a5a5a558 202 SMART SM00479 30 202 7.6E-11 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CHH28_RS16800 8f0828768c8efdd7c30af063a5a5a558 202 Gene3D G3DSA:3.30.420.10 24 201 2.6E-22 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS16800 8f0828768c8efdd7c30af063a5a5a558 202 SUPERFAMILY SSF53098 26 198 1.23E-26 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS16800 8f0828768c8efdd7c30af063a5a5a558 202 Pfam PF00929 Exonuclease 32 191 5.7E-10 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CHH28_RS17735 28388ddcdf5348c2aa29da56cd5be6e5 100 Pfam PF10262 Rdx family 4 77 1.4E-27 T 29-03-2018 IPR011893 Selenoprotein, Rdx type CHH28_RS17735 28388ddcdf5348c2aa29da56cd5be6e5 100 Gene3D G3DSA:3.40.30.10 1 97 1.1E-33 T 29-03-2018 CHH28_RS17735 28388ddcdf5348c2aa29da56cd5be6e5 100 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 5 76 9.1E-17 T 29-03-2018 IPR011893 Selenoprotein, Rdx type CHH28_RS17735 28388ddcdf5348c2aa29da56cd5be6e5 100 SUPERFAMILY SSF52833 2 86 2.46E-22 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS14500 713899b0da3aac92f7c1c777906f2697 119 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 26 1.5E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS14500 713899b0da3aac92f7c1c777906f2697 119 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS14500 713899b0da3aac92f7c1c777906f2697 119 SUPERFAMILY SSF54523 40 116 1.52E-18 T 29-03-2018 CHH28_RS14500 713899b0da3aac92f7c1c777906f2697 119 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 25 3.8E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS14500 713899b0da3aac92f7c1c777906f2697 119 Pfam PF02501 Type II secretion system (T2SS), protein I 40 116 6.2E-22 T 29-03-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 CHH28_RS14500 713899b0da3aac92f7c1c777906f2697 119 Gene3D G3DSA:3.30.1300.30 31 119 2.6E-23 T 29-03-2018 CHH28_RS14500 713899b0da3aac92f7c1c777906f2697 119 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 102 9.1E-22 T 29-03-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 CHH28_RS13070 ae9374c78529eb330b651294743d914a 376 Pfam PF00072 Response regulator receiver domain 4 113 8.4E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13070 ae9374c78529eb330b651294743d914a 376 SMART SM00448 2 114 1.4E-33 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13070 ae9374c78529eb330b651294743d914a 376 SUPERFAMILY SSF52172 3 139 3.84E-35 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS13070 ae9374c78529eb330b651294743d914a 376 Gene3D G3DSA:3.40.50.2300 2 348 4.0E-35 T 29-03-2018 CHH28_RS08725 cfb17bc1e9e57d47c80a6aff41c5fa8a 541 SUPERFAMILY SSF52540 1 267 8.86E-119 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS08725 cfb17bc1e9e57d47c80a6aff41c5fa8a 541 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 2.3E-245 T 29-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CHH28_RS08725 cfb17bc1e9e57d47c80a6aff41c5fa8a 541 Pfam PF06418 CTP synthase N-terminus 3 265 2.5E-122 T 29-03-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CHH28_RS08725 cfb17bc1e9e57d47c80a6aff41c5fa8a 541 SUPERFAMILY SSF52317 287 538 5.53E-87 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS08725 cfb17bc1e9e57d47c80a6aff41c5fa8a 541 Gene3D G3DSA:3.40.50.880 285 541 7.2E-73 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS08725 cfb17bc1e9e57d47c80a6aff41c5fa8a 541 Hamap MF_01227 CTP synthase [pyrG]. 2 539 50.102 T 29-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CHH28_RS08725 cfb17bc1e9e57d47c80a6aff41c5fa8a 541 Pfam PF00117 Glutamine amidotransferase class-I 300 533 3.6E-57 T 29-03-2018 IPR017926 Glutamine amidotransferase CHH28_RS08725 cfb17bc1e9e57d47c80a6aff41c5fa8a 541 Gene3D G3DSA:3.40.50.300 1 283 7.9E-124 T 29-03-2018 CHH28_RS18415 64fa05126cff02b758da0238a595ed7a 213 SUPERFAMILY SSF52218 23 189 6.2E-28 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS18415 64fa05126cff02b758da0238a595ed7a 213 Gene3D G3DSA:3.40.50.360 11 208 5.0E-28 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS18415 64fa05126cff02b758da0238a595ed7a 213 Pfam PF03358 NADPH-dependent FMN reductase 22 154 1.0E-25 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CHH28_RS13495 904590910888e606408422fc7d114918 402 PIRSF PIRSF004810 6 401 8.0E-85 T 29-03-2018 IPR014047 Chromate transporter, long chain CHH28_RS13495 904590910888e606408422fc7d114918 402 TIGRFAM TIGR00937 2A51: chromate efflux transporter 22 393 2.4E-61 T 29-03-2018 IPR014047 Chromate transporter, long chain CHH28_RS13495 904590910888e606408422fc7d114918 402 Pfam PF02417 Chromate transporter 233 394 5.0E-27 T 29-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CHH28_RS13495 904590910888e606408422fc7d114918 402 Pfam PF02417 Chromate transporter 16 173 1.5E-25 T 29-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CHH28_RS11355 06949d15765c374dbc89c7ceeffc120e 342 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 317 333 1.6E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS11355 06949d15765c374dbc89c7ceeffc120e 342 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 302 317 1.6E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS11355 06949d15765c374dbc89c7ceeffc120e 342 SMART SM00342 251 333 2.9E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS11355 06949d15765c374dbc89c7ceeffc120e 342 Pfam PF12833 Helix-turn-helix domain 257 335 4.4E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS11355 06949d15765c374dbc89c7ceeffc120e 342 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 26 208 8.6E-33 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS11355 06949d15765c374dbc89c7ceeffc120e 342 Gene3D G3DSA:1.10.10.60 219 285 9.3E-5 T 29-03-2018 CHH28_RS11355 06949d15765c374dbc89c7ceeffc120e 342 Gene3D G3DSA:1.10.10.60 289 342 5.4E-14 T 29-03-2018 CHH28_RS11355 06949d15765c374dbc89c7ceeffc120e 342 SUPERFAMILY SSF46689 286 337 3.58E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS06100 c18a4fa16935a1c2f3cf6d05fbb019df 169 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 166 34.095 T 29-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CHH28_RS06100 c18a4fa16935a1c2f3cf6d05fbb019df 169 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 11 166 2.1E-65 T 29-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CHH28_RS06100 c18a4fa16935a1c2f3cf6d05fbb019df 169 ProSitePatterns PS00585 Ribosomal protein S5 signature. 31 63 - T 29-03-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site CHH28_RS06100 c18a4fa16935a1c2f3cf6d05fbb019df 169 Gene3D G3DSA:3.30.160.20 13 75 2.6E-27 T 29-03-2018 CHH28_RS06100 c18a4fa16935a1c2f3cf6d05fbb019df 169 Pfam PF00333 Ribosomal protein S5, N-terminal domain 14 78 9.9E-29 T 29-03-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CHH28_RS06100 c18a4fa16935a1c2f3cf6d05fbb019df 169 Gene3D G3DSA:3.30.230.10 79 169 3.4E-32 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CHH28_RS06100 c18a4fa16935a1c2f3cf6d05fbb019df 169 Pfam PF03719 Ribosomal protein S5, C-terminal domain 90 160 6.9E-30 T 29-03-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CHH28_RS06100 c18a4fa16935a1c2f3cf6d05fbb019df 169 SUPERFAMILY SSF54768 11 79 3.35E-23 T 29-03-2018 CHH28_RS06100 c18a4fa16935a1c2f3cf6d05fbb019df 169 SUPERFAMILY SSF54211 83 162 6.57E-26 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS10985 78c7da2efd7b22a0e42bde108417d23b 320 SUPERFAMILY SSF46785 2 87 9.21E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS10985 78c7da2efd7b22a0e42bde108417d23b 320 Pfam PF03466 LysR substrate binding domain 88 290 4.3E-37 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS10985 78c7da2efd7b22a0e42bde108417d23b 320 Gene3D G3DSA:1.10.10.10 1 80 5.4E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS10985 78c7da2efd7b22a0e42bde108417d23b 320 SUPERFAMILY SSF53850 89 298 2.17E-39 T 29-03-2018 CHH28_RS10985 78c7da2efd7b22a0e42bde108417d23b 320 Gene3D G3DSA:3.40.190.10 81 177 2.2E-16 T 29-03-2018 CHH28_RS10985 78c7da2efd7b22a0e42bde108417d23b 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 8.5E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS10985 78c7da2efd7b22a0e42bde108417d23b 320 Gene3D G3DSA:3.40.190.10 178 265 2.7E-22 T 29-03-2018 CHH28_RS07350 24c880055304e9866e9b90324856472a 139 ProSitePatterns PS01117 MarR-type HTH domain signature. 63 97 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CHH28_RS07350 24c880055304e9866e9b90324856472a 139 SMART SM00347 24 124 1.5E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS07350 24c880055304e9866e9b90324856472a 139 SUPERFAMILY SSF46785 9 134 4.53E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS07350 24c880055304e9866e9b90324856472a 139 Pfam PF01047 MarR family 31 88 1.3E-11 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS07350 24c880055304e9866e9b90324856472a 139 Gene3D G3DSA:1.10.10.10 7 139 4.2E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS07350 24c880055304e9866e9b90324856472a 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 9.5E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS07350 24c880055304e9866e9b90324856472a 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 9.5E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS07350 24c880055304e9866e9b90324856472a 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 9.5E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 SUPERFAMILY SSF52440 1 127 5.75E-49 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 Gene3D G3DSA:3.40.50.1380 927 1054 1.5E-37 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 Gene3D G3DSA:3.30.470.20 129 403 3.2E-68 T 29-03-2018 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 SUPERFAMILY SSF52335 935 1069 4.19E-40 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 Gene3D G3DSA:3.40.50.20 539 654 6.0E-62 T 29-03-2018 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 SUPERFAMILY SSF48108 396 554 3.14E-51 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 SUPERFAMILY SSF56059 128 401 4.77E-110 T 29-03-2018 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.3E-39 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 Pfam PF02142 MGS-like domain 955 1041 1.2E-19 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 SMART SM01096 424 547 2.5E-74 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 Gene3D G3DSA:3.30.1490.20 655 743 1.3E-24 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 3.8E-32 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.2E-73 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 Gene3D G3DSA:3.30.470.20 744 926 2.1E-41 T 29-03-2018 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 SMART SM00851 955 1041 2.7E-33 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 Gene3D G3DSA:3.40.50.20 4 128 1.3E-38 T 29-03-2018 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 SUPERFAMILY SSF56059 673 933 7.78E-104 T 29-03-2018 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 SUPERFAMILY SSF52440 557 675 1.44E-48 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 Gene3D G3DSA:1.10.1030.10 404 538 9.4E-51 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 4.0E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 4.0E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 4.0E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 4.0E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 4.0E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 4.0E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 4.0E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.151 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS00525 4d4f5f95fdf1fb6a525ca28a393d67ef 1071 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.427 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CHH28_RS12615 e2e07cea7242978ebbd52a096346a278 348 Gene3D G3DSA:3.40.50.10800 28 115 7.9E-18 T 29-03-2018 CHH28_RS12615 e2e07cea7242978ebbd52a096346a278 348 Gene3D G3DSA:3.40.50.10800 215 326 5.5E-30 T 29-03-2018 CHH28_RS12615 e2e07cea7242978ebbd52a096346a278 348 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 32 345 5.7E-106 T 29-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CHH28_RS12615 e2e07cea7242978ebbd52a096346a278 348 Pfam PF02445 Quinolinate synthetase A protein 37 343 3.1E-98 T 29-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CHH28_RS12615 e2e07cea7242978ebbd52a096346a278 348 Gene3D G3DSA:3.40.50.10800 123 214 9.3E-22 T 29-03-2018 CHH28_RS12615 e2e07cea7242978ebbd52a096346a278 348 SUPERFAMILY SSF142754 34 344 3.79E-102 T 29-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 Pfam PF00989 PAS fold 279 388 7.4E-17 T 29-03-2018 IPR013767 PAS fold GO:0006355 CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 SMART SM00091 275 341 9.7E-8 T 29-03-2018 IPR000014 PAS domain CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 Gene3D G3DSA:3.30.450.20 275 408 2.0E-24 T 29-03-2018 CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 Pfam PF00072 Response regulator receiver domain 658 767 7.9E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 SUPERFAMILY SSF55785 286 399 4.97E-24 T 29-03-2018 IPR000014 PAS domain CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 SUPERFAMILY SSF55874 465 632 1.96E-46 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 523 633 6.4E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 SMART SM00387 523 634 1.8E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 Gene3D G3DSA:3.40.50.2300 640 773 1.4E-33 T 29-03-2018 CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 278 398 6.5E-22 T 29-03-2018 IPR000014 PAS domain CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 SUPERFAMILY SSF52172 654 771 1.99E-32 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 Gene3D G3DSA:3.30.565.10 480 639 6.3E-48 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 SUPERFAMILY SSF47384 396 477 9.02E-22 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 Gene3D G3DSA:1.10.287.130 409 472 4.6E-20 T 29-03-2018 CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 Pfam PF00512 His Kinase A (phospho-acceptor) domain 411 476 2.9E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 SMART SM00388 411 476 5.5E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 573 5.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 631 5.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 PRINTS PR00344 Bacterial sensor protein C-terminal signature 594 612 5.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 587 5.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS15785 d6de2df3ac535ae21d1097274850673a 773 SMART SM00448 656 767 3.9E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS17615 976329c494bdc08b3e32b320abd621e6 236 Gene3D G3DSA:3.20.20.70 5 234 2.3E-68 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS17615 976329c494bdc08b3e32b320abd621e6 236 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 10 229 6.6E-58 T 29-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CHH28_RS17615 976329c494bdc08b3e32b320abd621e6 236 SMART SM00934 9 229 2.6E-96 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CHH28_RS17615 976329c494bdc08b3e32b320abd621e6 236 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 8 228 1.0E-49 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CHH28_RS17615 976329c494bdc08b3e32b320abd621e6 236 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 61 74 - T 29-03-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CHH28_RS17615 976329c494bdc08b3e32b320abd621e6 236 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 7 234 39.43 T 29-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CHH28_RS17615 976329c494bdc08b3e32b320abd621e6 236 SUPERFAMILY SSF51366 8 232 2.0E-75 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CHH28_RS10905 0e067e0928def842d184ed867af21ed0 604 Gene3D G3DSA:2.40.160.60 95 603 3.6E-80 T 29-03-2018 CHH28_RS10905 0e067e0928def842d184ed867af21ed0 604 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 86 603 1.1E-109 T 29-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CHH28_RS10905 0e067e0928def842d184ed867af21ed0 604 SUPERFAMILY SSF56935 302 363 1.65E-84 T 29-03-2018 CHH28_RS10905 0e067e0928def842d184ed867af21ed0 604 SUPERFAMILY SSF56935 95 268 1.65E-84 T 29-03-2018 CHH28_RS10905 0e067e0928def842d184ed867af21ed0 604 SUPERFAMILY SSF56935 402 603 1.65E-84 T 29-03-2018 CHH28_RS05620 407c991cfad445cd11c1553056957969 263 Pfam PF02311 AraC-like ligand binding domain 3 133 2.3E-24 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CHH28_RS05620 407c991cfad445cd11c1553056957969 263 Gene3D G3DSA:1.10.10.60 213 261 2.8E-12 T 29-03-2018 CHH28_RS05620 407c991cfad445cd11c1553056957969 263 SUPERFAMILY SSF46689 160 210 2.2E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS05620 407c991cfad445cd11c1553056957969 263 Gene3D G3DSA:1.10.10.60 153 212 9.7E-15 T 29-03-2018 CHH28_RS05620 407c991cfad445cd11c1553056957969 263 SUPERFAMILY SSF51215 16 134 1.18E-18 T 29-03-2018 CHH28_RS05620 407c991cfad445cd11c1553056957969 263 Pfam PF12833 Helix-turn-helix domain 182 258 2.4E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS05620 407c991cfad445cd11c1553056957969 263 Gene3D G3DSA:2.60.120.280 6 149 5.5E-11 T 29-03-2018 CHH28_RS05620 407c991cfad445cd11c1553056957969 263 SUPERFAMILY SSF46689 212 259 4.39E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS05620 407c991cfad445cd11c1553056957969 263 SMART SM00342 176 258 1.3E-27 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 TIGRFAM TIGR00838 argH: argininosuccinate lyase 9 460 2.3E-199 T 29-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 ProSitePatterns PS00163 Fumarate lyases signature. 280 289 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 PRINTS PR00149 Fumarate lyase superfamily signature 280 296 6.4E-31 T 29-03-2018 IPR000362 Fumarate lyase family CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 PRINTS PR00149 Fumarate lyase superfamily signature 236 263 6.4E-31 T 29-03-2018 IPR000362 Fumarate lyase family CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 PRINTS PR00149 Fumarate lyase superfamily signature 107 125 6.4E-31 T 29-03-2018 IPR000362 Fumarate lyase family CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 PRINTS PR00149 Fumarate lyase superfamily signature 152 170 6.4E-31 T 29-03-2018 IPR000362 Fumarate lyase family CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 Gene3D G3DSA:1.20.200.10 112 379 2.6E-98 T 29-03-2018 CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 Pfam PF00206 Lyase 11 305 1.8E-80 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 Pfam PF14698 Argininosuccinate lyase C-terminal 368 436 3.5E-26 T 29-03-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 SUPERFAMILY SSF48557 9 460 1.88E-155 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 Gene3D G3DSA:1.10.275.10 7 111 4.3E-39 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 PRINTS PR00145 Argininosuccinate lyase family signature 315 334 4.5E-69 T 29-03-2018 CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 PRINTS PR00145 Argininosuccinate lyase family signature 106 128 4.5E-69 T 29-03-2018 CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 PRINTS PR00145 Argininosuccinate lyase family signature 198 214 4.5E-69 T 29-03-2018 CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 PRINTS PR00145 Argininosuccinate lyase family signature 236 260 4.5E-69 T 29-03-2018 CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 PRINTS PR00145 Argininosuccinate lyase family signature 280 296 4.5E-69 T 29-03-2018 CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 PRINTS PR00145 Argininosuccinate lyase family signature 147 167 4.5E-69 T 29-03-2018 CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 Gene3D G3DSA:1.10.40.30 380 437 1.0E-27 T 29-03-2018 CHH28_RS03820 cb5d0a11b697684043f3d946247cf0e4 463 Hamap MF_00006 Argininosuccinate lyase [argH]. 7 458 44.354 T 29-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS05630 60f65d2cb4d9bc8ab52298422c7e7d21 583 Pfam PF08309 LVIVD repeat 196 237 0.0025 T 29-03-2018 IPR013211 LVIVD CHH28_RS05630 60f65d2cb4d9bc8ab52298422c7e7d21 583 SUPERFAMILY SSF75011 106 304 4.71E-7 T 29-03-2018 CHH28_RS05630 60f65d2cb4d9bc8ab52298422c7e7d21 583 TIGRFAM TIGR04312 choice_anch_B: choice-of-anchor B domain 63 430 1.7E-154 T 29-03-2018 IPR027589 Choice-of-anchor B domain CHH28_RS15180 90e6af99e7dfd521b8bba35d4ded9306 882 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 128 291 1.7E-8 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CHH28_RS15180 90e6af99e7dfd521b8bba35d4ded9306 882 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 2 880 0.0 T 29-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CHH28_RS15180 90e6af99e7dfd521b8bba35d4ded9306 882 SUPERFAMILY SSF52518 53 463 7.17E-136 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CHH28_RS15180 90e6af99e7dfd521b8bba35d4ded9306 882 Gene3D G3DSA:3.40.50.970 52 465 1.5E-85 T 29-03-2018 CHH28_RS15180 90e6af99e7dfd521b8bba35d4ded9306 882 Gene3D G3DSA:3.40.50.920 701 882 9.6E-38 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CHH28_RS15180 90e6af99e7dfd521b8bba35d4ded9306 882 Gene3D G3DSA:3.40.50.970 466 700 2.0E-69 T 29-03-2018 CHH28_RS15180 90e6af99e7dfd521b8bba35d4ded9306 882 SUPERFAMILY SSF52518 468 694 4.12E-97 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CHH28_RS15180 90e6af99e7dfd521b8bba35d4ded9306 882 SUPERFAMILY SSF52922 698 880 2.97E-55 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CHH28_RS15180 90e6af99e7dfd521b8bba35d4ded9306 882 PIRSF PIRSF000156 1 882 0.0 T 29-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CHH28_RS08685 22498d90af1d79135d4e034f0b072849 421 Gene3D G3DSA:3.65.10.10 21 222 2.4E-47 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CHH28_RS08685 22498d90af1d79135d4e034f0b072849 421 Gene3D G3DSA:3.65.10.10 223 421 2.9E-46 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CHH28_RS08685 22498d90af1d79135d4e034f0b072849 421 SUPERFAMILY SSF55205 1 420 8.34E-141 T 29-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CHH28_RS08685 22498d90af1d79135d4e034f0b072849 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 2.1E-176 T 29-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS08685 22498d90af1d79135d4e034f0b072849 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 408 1.8E-113 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CHH28_RS08685 22498d90af1d79135d4e034f0b072849 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 44.546 T 29-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS11450 02bea0f4d0b8d6fec24e32e837952e71 284 Gene3D G3DSA:1.10.8.10 1 56 3.6E-21 T 29-03-2018 CHH28_RS11450 02bea0f4d0b8d6fec24e32e837952e71 284 Gene3D G3DSA:3.30.479.20 149 281 3.8E-48 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CHH28_RS11450 02bea0f4d0b8d6fec24e32e837952e71 284 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 283 1.9E-90 T 29-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CHH28_RS11450 02bea0f4d0b8d6fec24e32e837952e71 284 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 29-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CHH28_RS11450 02bea0f4d0b8d6fec24e32e837952e71 284 SUPERFAMILY SSF46934 3 56 3.11E-16 T 29-03-2018 IPR009060 UBA-like GO:0005515 CHH28_RS11450 02bea0f4d0b8d6fec24e32e837952e71 284 Pfam PF00889 Elongation factor TS 72 265 1.7E-60 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CHH28_RS11450 02bea0f4d0b8d6fec24e32e837952e71 284 SUPERFAMILY SSF54713 143 283 1.31E-50 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CHH28_RS11450 02bea0f4d0b8d6fec24e32e837952e71 284 SUPERFAMILY SSF54713 57 140 6.76E-14 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CHH28_RS11450 02bea0f4d0b8d6fec24e32e837952e71 284 Hamap MF_00050 Elongation factor Ts [tsf]. 1 282 69.485 T 29-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CHH28_RS11450 02bea0f4d0b8d6fec24e32e837952e71 284 Gene3D G3DSA:3.30.479.20 58 148 3.7E-10 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CHH28_RS03440 10ecb8576586c7ff530a8aa295384917 111 Pfam PF03788 LrgA family 12 104 1.8E-15 T 29-03-2018 IPR005538 LrgA/CidA family GO:0016021 CHH28_RS15510 06ac6c88b361fba5ace3d4d6e9d4c2ed 489 SUPERFAMILY SSF47090 404 485 1.7E-8 T 29-03-2018 IPR002477 Peptidoglycan binding-like CHH28_RS15510 06ac6c88b361fba5ace3d4d6e9d4c2ed 489 Gene3D G3DSA:1.10.101.10 406 488 1.8E-11 T 29-03-2018 IPR002477 Peptidoglycan binding-like CHH28_RS15510 06ac6c88b361fba5ace3d4d6e9d4c2ed 489 Gene3D G3DSA:3.40.50.300 31 211 5.2E-12 T 29-03-2018 CHH28_RS15510 06ac6c88b361fba5ace3d4d6e9d4c2ed 489 SUPERFAMILY SSF52540 11 264 1.33E-33 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS15510 06ac6c88b361fba5ace3d4d6e9d4c2ed 489 SMART SM00382 48 201 3.9E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS15510 06ac6c88b361fba5ace3d4d6e9d4c2ed 489 Pfam PF13401 AAA domain 48 177 2.6E-21 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS00565 15e8dee36add91e58140e78291f65dad 136 Pfam PF01475 Ferric uptake regulator family 10 130 5.9E-43 T 29-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CHH28_RS00565 15e8dee36add91e58140e78291f65dad 136 Gene3D G3DSA:1.10.10.10 4 90 2.4E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS00565 15e8dee36add91e58140e78291f65dad 136 SUPERFAMILY SSF46785 8 133 1.54E-37 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS06505 3b7d14f6a0015e1b4c07a64be2c6f6f4 310 Pfam PF01734 Patatin-like phospholipase 13 98 1.3E-9 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CHH28_RS06505 3b7d14f6a0015e1b4c07a64be2c6f6f4 310 Pfam PF01734 Patatin-like phospholipase 134 177 6.9E-8 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CHH28_RS06505 3b7d14f6a0015e1b4c07a64be2c6f6f4 310 Gene3D G3DSA:3.40.1090.10 1 237 3.1E-27 T 29-03-2018 CHH28_RS06505 3b7d14f6a0015e1b4c07a64be2c6f6f4 310 SUPERFAMILY SSF52151 10 228 4.71E-37 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CHH28_RS14235 bc192a9ce24db384359b82a8a9ffa970 315 Gene3D G3DSA:3.20.20.70 1 313 3.4E-118 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS14235 bc192a9ce24db384359b82a8a9ffa970 315 TIGRFAM TIGR00874 talAB: transaldolase 3 313 2.0E-140 T 29-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CHH28_RS14235 bc192a9ce24db384359b82a8a9ffa970 315 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CHH28_RS14235 bc192a9ce24db384359b82a8a9ffa970 315 ProSitePatterns PS00958 Transaldolase active site. 125 142 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CHH28_RS14235 bc192a9ce24db384359b82a8a9ffa970 315 Hamap MF_00492 Transaldolase [tal]. 1 313 49.88 T 29-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CHH28_RS14235 bc192a9ce24db384359b82a8a9ffa970 315 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 13 307 6.4E-101 T 29-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CHH28_RS14235 bc192a9ce24db384359b82a8a9ffa970 315 SUPERFAMILY SSF51569 1 312 2.41E-109 T 29-03-2018 CHH28_RS00490 fd838abf28175b23ec3df1a6c6959669 641 SUPERFAMILY SSF52540 144 392 2.51E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS00490 fd838abf28175b23ec3df1a6c6959669 641 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 99 595 7.2E-232 T 29-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CHH28_RS00490 fd838abf28175b23ec3df1a6c6959669 641 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 189 321 6.5E-45 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CHH28_RS00490 fd838abf28175b23ec3df1a6c6959669 641 Pfam PF06480 FtsH Extracellular 6 90 3.3E-13 T 29-03-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 CHH28_RS00490 fd838abf28175b23ec3df1a6c6959669 641 Gene3D G3DSA:1.10.8.60 334 411 6.9E-25 T 29-03-2018 CHH28_RS00490 fd838abf28175b23ec3df1a6c6959669 641 SUPERFAMILY SSF140990 403 604 4.45E-73 T 29-03-2018 CHH28_RS00490 fd838abf28175b23ec3df1a6c6959669 641 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 611 36.781 T 29-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CHH28_RS00490 fd838abf28175b23ec3df1a6c6959669 641 ProSitePatterns PS00674 AAA-protein family signature. 292 310 - T 29-03-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CHH28_RS00490 fd838abf28175b23ec3df1a6c6959669 641 SMART SM00382 185 324 3.3E-23 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS00490 fd838abf28175b23ec3df1a6c6959669 641 Gene3D G3DSA:3.40.50.300 133 333 1.6E-61 T 29-03-2018 CHH28_RS00490 fd838abf28175b23ec3df1a6c6959669 641 Pfam PF01434 Peptidase family M41 382 594 9.0E-78 T 29-03-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CHH28_RS00445 4e9114a0312abfacb3175ccb0ab33f3d 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 122 21.109 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CHH28_RS00445 4e9114a0312abfacb3175ccb0ab33f3d 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 102 2.0E-23 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CHH28_RS00445 4e9114a0312abfacb3175ccb0ab33f3d 133 Gene3D G3DSA:3.30.300.20 1 108 1.4E-32 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CHH28_RS00445 4e9114a0312abfacb3175ccb0ab33f3d 133 SUPERFAMILY SSF89919 2 118 2.22E-30 T 29-03-2018 IPR023799 Ribosome-binding factor A domain CHH28_RS00445 4e9114a0312abfacb3175ccb0ab33f3d 133 Pfam PF02033 Ribosome-binding factor A 7 114 3.9E-28 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CHH28_RS00445 4e9114a0312abfacb3175ccb0ab33f3d 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 6 117 3.7E-24 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CHH28_RS04690 8b34de6bdae9461af753f17f0c82e3bf 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 9.6E-28 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS04690 8b34de6bdae9461af753f17f0c82e3bf 240 SMART SM00448 4 117 2.2E-45 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS04690 8b34de6bdae9461af753f17f0c82e3bf 240 SUPERFAMILY SSF52172 2 128 4.41E-46 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS04690 8b34de6bdae9461af753f17f0c82e3bf 240 SMART SM00862 151 226 3.3E-29 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS04690 8b34de6bdae9461af753f17f0c82e3bf 240 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 4 226 9.5E-99 T 29-03-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 CHH28_RS04690 8b34de6bdae9461af753f17f0c82e3bf 240 SUPERFAMILY SSF46894 129 228 1.67E-30 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CHH28_RS04690 8b34de6bdae9461af753f17f0c82e3bf 240 Pfam PF00072 Response regulator receiver domain 6 118 1.3E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS04690 8b34de6bdae9461af753f17f0c82e3bf 240 Gene3D G3DSA:1.10.10.10 122 233 2.9E-32 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04690 8b34de6bdae9461af753f17f0c82e3bf 240 Gene3D G3DSA:3.40.50.2300 1 121 3.1E-39 T 29-03-2018 CHH28_RS04020 b6a8e428b64f17e0f82007cae00d4804 385 Gene3D G3DSA:1.20.1250.20 200 385 1.6E-10 T 29-03-2018 CHH28_RS04020 b6a8e428b64f17e0f82007cae00d4804 385 Gene3D G3DSA:1.20.1250.20 7 199 6.9E-18 T 29-03-2018 CHH28_RS04020 b6a8e428b64f17e0f82007cae00d4804 385 SUPERFAMILY SSF103473 10 383 4.71E-32 T 29-03-2018 IPR020846 Major facilitator superfamily domain CHH28_RS04020 b6a8e428b64f17e0f82007cae00d4804 385 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 24 376 3.7E-62 T 29-03-2018 IPR010645 Uncharacterised MFS-type transporter YbfB CHH28_RS13590 78303fefb5353490b86f9fe961e9812f 394 Gene3D G3DSA:3.90.1150.10 303 392 2.4E-17 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS13590 78303fefb5353490b86f9fe961e9812f 394 SUPERFAMILY SSF53383 1 386 1.97E-101 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS13590 78303fefb5353490b86f9fe961e9812f 394 PRINTS PR00799 Aspartate aminotransferase signature 203 215 1.3E-30 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CHH28_RS13590 78303fefb5353490b86f9fe961e9812f 394 PRINTS PR00799 Aspartate aminotransferase signature 270 295 1.3E-30 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CHH28_RS13590 78303fefb5353490b86f9fe961e9812f 394 PRINTS PR00799 Aspartate aminotransferase signature 172 191 1.3E-30 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CHH28_RS13590 78303fefb5353490b86f9fe961e9812f 394 PRINTS PR00799 Aspartate aminotransferase signature 338 356 1.3E-30 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CHH28_RS13590 78303fefb5353490b86f9fe961e9812f 394 Pfam PF00155 Aminotransferase class I and II 27 388 1.7E-68 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CHH28_RS13590 78303fefb5353490b86f9fe961e9812f 394 Gene3D G3DSA:3.40.640.10 81 302 1.5E-29 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS13590 78303fefb5353490b86f9fe961e9812f 394 Gene3D G3DSA:3.90.1150.10 1 80 1.7E-12 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS08625 ad799744da31a806218d3d8060421481 99 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 4.0E-29 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CHH28_RS08625 ad799744da31a806218d3d8060421481 99 Gene3D G3DSA:3.30.160.100 1 96 9.5E-33 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CHH28_RS08625 ad799744da31a806218d3d8060421481 99 SUPERFAMILY SSF69754 2 98 2.09E-35 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CHH28_RS08625 ad799744da31a806218d3d8060421481 99 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 7.4E-34 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CHH28_RS13675 1326c0ff3335e63c393f91522977385d 790 Gene3D G3DSA:3.40.50.2000 190 361 2.9E-43 T 29-03-2018 CHH28_RS13675 1326c0ff3335e63c393f91522977385d 790 Gene3D G3DSA:3.40.50.2000 527 760 9.1E-25 T 29-03-2018 CHH28_RS13675 1326c0ff3335e63c393f91522977385d 790 SUPERFAMILY SSF53756 428 769 6.52E-33 T 29-03-2018 CHH28_RS13675 1326c0ff3335e63c393f91522977385d 790 SUPERFAMILY SSF53756 14 379 7.14E-76 T 29-03-2018 CHH28_RS13675 1326c0ff3335e63c393f91522977385d 790 Pfam PF13439 Glycosyltransferase Family 4 24 180 3.8E-18 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CHH28_RS13675 1326c0ff3335e63c393f91522977385d 790 Pfam PF00534 Glycosyl transferases group 1 604 755 3.1E-15 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CHH28_RS13675 1326c0ff3335e63c393f91522977385d 790 Pfam PF00534 Glycosyl transferases group 1 196 356 1.4E-33 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CHH28_RS13675 1326c0ff3335e63c393f91522977385d 790 Gene3D G3DSA:3.40.50.2000 6 189 9.6E-16 T 29-03-2018 CHH28_RS10285 fa2f15a0eed3176328df7c88fd8bcb70 410 Gene3D G3DSA:1.10.287.1060 94 181 0.022 T 29-03-2018 CHH28_RS10285 fa2f15a0eed3176328df7c88fd8bcb70 410 Gene3D G3DSA:1.20.120.20 182 388 4.3E-7 T 29-03-2018 CHH28_RS16855 e78ce2077e9680e5543a37e160f5e20d 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 102 120 4.7E-56 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16855 e78ce2077e9680e5543a37e160f5e20d 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 54 71 4.7E-56 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16855 e78ce2077e9680e5543a37e160f5e20d 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 28 49 4.7E-56 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16855 e78ce2077e9680e5543a37e160f5e20d 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 157 176 4.7E-56 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16855 e78ce2077e9680e5543a37e160f5e20d 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 77 100 4.7E-56 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16855 e78ce2077e9680e5543a37e160f5e20d 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 194 217 4.7E-56 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16855 e78ce2077e9680e5543a37e160f5e20d 222 Pfam PF03379 CcmB protein 6 217 4.1E-74 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16855 e78ce2077e9680e5543a37e160f5e20d 222 PIRSF PIRSF002764 1 221 2.1E-77 T 29-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CHH28_RS16855 e78ce2077e9680e5543a37e160f5e20d 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 217 6.1E-75 T 29-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CHH28_RS11995 940b297d66dcf7ee30d48c9d48cff296 1149 Pfam PF00270 DEAD/DEAH box helicase 604 763 2.9E-20 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CHH28_RS11995 940b297d66dcf7ee30d48c9d48cff296 1149 SMART SM01058 478 575 1.6E-49 T 29-03-2018 IPR003711 CarD-like/TRCF domain CHH28_RS11995 940b297d66dcf7ee30d48c9d48cff296 1149 SUPERFAMILY SSF52540 781 988 1.59E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11995 940b297d66dcf7ee30d48c9d48cff296 1149 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 24 1108 28.857 T 29-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CHH28_RS11995 940b297d66dcf7ee30d48c9d48cff296 1149 SMART SM00487 599 789 9.2E-35 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CHH28_RS11995 940b297d66dcf7ee30d48c9d48cff296 1149 SUPERFAMILY SSF143517 996 1144 2.09E-40 T 29-03-2018 CHH28_RS11995 940b297d66dcf7ee30d48c9d48cff296 1149 SUPERFAMILY SSF52540 522 782 1.08E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11995 940b297d66dcf7ee30d48c9d48cff296 1149 Pfam PF03461 TRCF domain 1007 1098 5.3E-26 T 29-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CHH28_RS11995 940b297d66dcf7ee30d48c9d48cff296 1149 SUPERFAMILY SSF52540 350 464 3.56E-21 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11995 940b297d66dcf7ee30d48c9d48cff296 1149 SUPERFAMILY SSF52540 11 341 2.45E-99 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11995 940b297d66dcf7ee30d48c9d48cff296 1149 SMART SM00982 1006 1106 9.9E-45 T 29-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CHH28_RS11995 940b297d66dcf7ee30d48c9d48cff296 1149 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 29-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CHH28_RS11995 940b297d66dcf7ee30d48c9d48cff296 1149 Pfam PF02559 CarD-like/TRCF domain 479 574 1.4E-24 T 29-03-2018 IPR003711 CarD-like/TRCF domain CHH28_RS11995 940b297d66dcf7ee30d48c9d48cff296 1149 SMART SM00490 825 909 1.5E-19 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS11995 940b297d66dcf7ee30d48c9d48cff296 1149 Pfam PF00271 Helicase conserved C-terminal domain 804 908 9.1E-18 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS11995 940b297d66dcf7ee30d48c9d48cff296 1149 SUPERFAMILY SSF141259 469 547 6.8E-23 T 29-03-2018 IPR003711 CarD-like/TRCF domain CHH28_RS11995 940b297d66dcf7ee30d48c9d48cff296 1149 Gene3D G3DSA:3.40.50.300 282 777 1.6E-42 T 29-03-2018 CHH28_RS11995 940b297d66dcf7ee30d48c9d48cff296 1149 Gene3D G3DSA:3.40.50.300 787 954 1.7E-25 T 29-03-2018 CHH28_RS13935 df71a5af944632f942985c364f385ad3 1301 Pfam PF04408 Helicase associated domain (HA2) 473 559 5.6E-21 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 CHH28_RS13935 df71a5af944632f942985c364f385ad3 1301 Gene3D G3DSA:3.40.50.300 253 430 7.6E-46 T 29-03-2018 CHH28_RS13935 df71a5af944632f942985c364f385ad3 1301 SUPERFAMILY SSF52540 74 606 1.25E-106 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS13935 df71a5af944632f942985c364f385ad3 1301 Gene3D G3DSA:3.40.50.300 76 235 6.3E-32 T 29-03-2018 CHH28_RS13935 df71a5af944632f942985c364f385ad3 1301 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 14 1293 0.0 T 29-03-2018 IPR010222 RNA helicase HrpA GO:0004004 CHH28_RS13935 df71a5af944632f942985c364f385ad3 1301 SMART SM00490 310 410 9.0E-15 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS13935 df71a5af944632f942985c364f385ad3 1301 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 623 697 4.0E-17 T 29-03-2018 IPR011709 Domain of unknown function DUF1605 CHH28_RS13935 df71a5af944632f942985c364f385ad3 1301 Pfam PF00271 Helicase conserved C-terminal domain 284 409 2.8E-12 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS13935 df71a5af944632f942985c364f385ad3 1301 Pfam PF11898 Domain of unknown function (DUF3418) 712 1293 3.6E-169 T 29-03-2018 IPR024590 RNA helicase HrpA, C-terminal CHH28_RS13935 df71a5af944632f942985c364f385ad3 1301 Pfam PF00270 DEAD/DEAH box helicase 86 233 3.3E-6 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CHH28_RS13935 df71a5af944632f942985c364f385ad3 1301 SMART SM00487 75 259 1.9E-30 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CHH28_RS13935 df71a5af944632f942985c364f385ad3 1301 SMART SM00847 470 560 1.7E-36 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 CHH28_RS13935 df71a5af944632f942985c364f385ad3 1301 SMART SM00382 92 376 0.0077 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS16230 00bff39fd9990e423557e749d455e86a 548 SUPERFAMILY SSF56801 5 540 3.01E-113 T 29-03-2018 CHH28_RS16230 00bff39fd9990e423557e749d455e86a 548 Gene3D G3DSA:2.30.38.10 351 422 6.0E-19 T 29-03-2018 CHH28_RS16230 00bff39fd9990e423557e749d455e86a 548 ProSitePatterns PS00455 Putative AMP-binding domain signature. 171 182 - T 29-03-2018 IPR020845 AMP-binding, conserved site CHH28_RS16230 00bff39fd9990e423557e749d455e86a 548 Gene3D G3DSA:3.40.50.980 176 350 1.1E-35 T 29-03-2018 CHH28_RS16230 00bff39fd9990e423557e749d455e86a 548 Pfam PF00501 AMP-binding enzyme 13 429 2.8E-90 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CHH28_RS16230 00bff39fd9990e423557e749d455e86a 548 Gene3D G3DSA:3.30.300.30 424 543 1.5E-15 T 29-03-2018 CHH28_RS16230 00bff39fd9990e423557e749d455e86a 548 Gene3D G3DSA:3.40.50.980 3 175 9.2E-37 T 29-03-2018 CHH28_RS07255 048bca3b542b42982f246732336b42ff 258 Pfam PF00561 alpha/beta hydrolase fold 25 138 1.8E-20 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS07255 048bca3b542b42982f246732336b42ff 258 Gene3D G3DSA:3.40.50.1820 2 258 9.7E-44 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS07255 048bca3b542b42982f246732336b42ff 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 1.7E-5 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS07255 048bca3b542b42982f246732336b42ff 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 1.7E-5 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS07255 048bca3b542b42982f246732336b42ff 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 1.7E-5 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS07255 048bca3b542b42982f246732336b42ff 258 SUPERFAMILY SSF53474 6 253 4.95E-50 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS13905 8f0e86842f09da003bf151ebd7d9a7ef 734 Gene3D G3DSA:2.60.40.10 299 548 9.3E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS13905 8f0e86842f09da003bf151ebd7d9a7ef 734 SUPERFAMILY SSF53300 22 206 6.52E-23 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS13905 8f0e86842f09da003bf151ebd7d9a7ef 734 Gene3D G3DSA:3.40.50.410 14 218 7.9E-28 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS13905 8f0e86842f09da003bf151ebd7d9a7ef 734 SMART SM00327 23 207 5.6E-12 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS13905 8f0e86842f09da003bf151ebd7d9a7ef 734 Pfam PF00092 von Willebrand factor type A domain 25 201 8.9E-13 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS18945 0eb8ae8bb21d367bb48a87d032de5691 248 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 243 1.2E-22 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CHH28_RS18945 0eb8ae8bb21d367bb48a87d032de5691 248 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 121 4.2E-37 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CHH28_RS18945 0eb8ae8bb21d367bb48a87d032de5691 248 SUPERFAMILY SSF117143 78 206 1.31E-17 T 29-03-2018 CHH28_RS18945 0eb8ae8bb21d367bb48a87d032de5691 248 Pfam PF00460 Flagella basal body rod protein 5 35 2.9E-6 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CHH28_RS05990 e5bc58f6b31227efba35c1e1baaeb7d1 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 3.7E-70 T 29-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS05990 e5bc58f6b31227efba35c1e1baaeb7d1 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS05990 e5bc58f6b31227efba35c1e1baaeb7d1 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.5E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS05990 e5bc58f6b31227efba35c1e1baaeb7d1 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.5E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS05990 e5bc58f6b31227efba35c1e1baaeb7d1 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.5E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS05990 e5bc58f6b31227efba35c1e1baaeb7d1 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.5E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS05990 e5bc58f6b31227efba35c1e1baaeb7d1 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.5E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS05990 e5bc58f6b31227efba35c1e1baaeb7d1 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.5E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS05990 e5bc58f6b31227efba35c1e1baaeb7d1 124 SUPERFAMILY SSF50249 3 123 5.4E-51 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS05990 e5bc58f6b31227efba35c1e1baaeb7d1 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 6.5E-42 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS05990 e5bc58f6b31227efba35c1e1baaeb7d1 124 Gene3D G3DSA:2.40.50.140 1 124 8.5E-64 T 29-03-2018 CHH28_RS05990 e5bc58f6b31227efba35c1e1baaeb7d1 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.712 T 29-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS05990 e5bc58f6b31227efba35c1e1baaeb7d1 124 PIRSF PIRSF002133 1 124 9.6E-53 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06690 2de4407ab57471b0fece85c8972c3f05 153 Gene3D G3DSA:3.40.630.30 1 144 5.4E-32 T 29-03-2018 CHH28_RS06690 2de4407ab57471b0fece85c8972c3f05 153 Pfam PF00583 Acetyltransferase (GNAT) family 47 141 4.1E-18 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS06690 2de4407ab57471b0fece85c8972c3f05 153 SUPERFAMILY SSF55729 1 144 5.4E-33 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS15290 34373bbb427999a8230b532be0a5de07 948 Gene3D G3DSA:1.10.1060.10 524 640 1.6E-17 T 29-03-2018 CHH28_RS15290 34373bbb427999a8230b532be0a5de07 948 SUPERFAMILY SSF56176 11 269 1.55E-55 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CHH28_RS15290 34373bbb427999a8230b532be0a5de07 948 Pfam PF12838 4Fe-4S dicluster domain 545 616 2.9E-9 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CHH28_RS15290 34373bbb427999a8230b532be0a5de07 948 SUPERFAMILY SSF46548 498 628 9.07E-21 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CHH28_RS15290 34373bbb427999a8230b532be0a5de07 948 Gene3D G3DSA:3.30.43.10 5 96 4.1E-14 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CHH28_RS15290 34373bbb427999a8230b532be0a5de07 948 Gene3D G3DSA:1.10.45.10 482 521 2.5E-14 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CHH28_RS15290 34373bbb427999a8230b532be0a5de07 948 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 546 557 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CHH28_RS15290 34373bbb427999a8230b532be0a5de07 948 Pfam PF01565 FAD binding domain 47 184 1.5E-31 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CHH28_RS15290 34373bbb427999a8230b532be0a5de07 948 Pfam PF02913 FAD linked oxidases, C-terminal domain 272 519 7.8E-56 T 29-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CHH28_RS15290 34373bbb427999a8230b532be0a5de07 948 Pfam PF02754 Cysteine-rich domain 715 781 0.023 T 29-03-2018 IPR004017 Cysteine-rich domain CHH28_RS15290 34373bbb427999a8230b532be0a5de07 948 Pfam PF02754 Cysteine-rich domain 845 892 0.027 T 29-03-2018 IPR004017 Cysteine-rich domain CHH28_RS15290 34373bbb427999a8230b532be0a5de07 948 SUPERFAMILY SSF55103 275 525 3.27E-54 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CHH28_RS15290 34373bbb427999a8230b532be0a5de07 948 Gene3D G3DSA:3.30.465.10 98 294 2.7E-28 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CHH28_RS04265 3a2492b2d92df1e2f078d688767983c9 324 SUPERFAMILY SSF55821 15 213 3.36E-59 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CHH28_RS04265 3a2492b2d92df1e2f078d688767983c9 324 Pfam PF01300 Telomere recombination 26 201 1.6E-54 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 CHH28_RS04265 3a2492b2d92df1e2f078d688767983c9 324 Pfam PF03481 Putative GTP-binding controlling metal-binding 203 322 3.0E-17 T 29-03-2018 IPR005145 Putative GTP-binding controlling metal-binding domain CHH28_RS04265 3a2492b2d92df1e2f078d688767983c9 324 Gene3D G3DSA:3.90.870.10 7 217 2.1E-73 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CHH28_RS04265 3a2492b2d92df1e2f078d688767983c9 324 PIRSF PIRSF004930 6 324 3.7E-97 T 29-03-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 CHH28_RS04265 3a2492b2d92df1e2f078d688767983c9 324 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 16 212 1.0E-53 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 CHH28_RS16510 5cc15f212ce8cffd7315b2cb8d41c7a1 374 Gene3D G3DSA:3.90.180.10 313 374 0.0015 T 29-03-2018 CHH28_RS16510 5cc15f212ce8cffd7315b2cb8d41c7a1 374 Gene3D G3DSA:3.90.180.10 1 192 1.6E-62 T 29-03-2018 CHH28_RS16510 5cc15f212ce8cffd7315b2cb8d41c7a1 374 SMART SM00829 17 372 0.0017 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CHH28_RS16510 5cc15f212ce8cffd7315b2cb8d41c7a1 374 SUPERFAMILY SSF50129 3 189 7.76E-76 T 29-03-2018 IPR011032 GroES-like CHH28_RS16510 5cc15f212ce8cffd7315b2cb8d41c7a1 374 SUPERFAMILY SSF51735 165 338 6.48E-48 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS16510 5cc15f212ce8cffd7315b2cb8d41c7a1 374 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CHH28_RS16510 5cc15f212ce8cffd7315b2cb8d41c7a1 374 Pfam PF00107 Zinc-binding dehydrogenase 202 327 3.8E-23 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CHH28_RS16510 5cc15f212ce8cffd7315b2cb8d41c7a1 374 Gene3D G3DSA:3.40.50.720 193 312 1.6E-24 T 29-03-2018 CHH28_RS16510 5cc15f212ce8cffd7315b2cb8d41c7a1 374 SUPERFAMILY SSF50129 323 374 1.04E-11 T 29-03-2018 IPR011032 GroES-like CHH28_RS16510 5cc15f212ce8cffd7315b2cb8d41c7a1 374 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 158 2.2E-25 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CHH28_RS16510 5cc15f212ce8cffd7315b2cb8d41c7a1 374 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 8 374 1.5E-220 T 29-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 CHH28_RS11295 63c04d54bf807a48acef8e3f55a73e23 370 SUPERFAMILY SSF56014 265 352 1.31E-11 T 29-03-2018 CHH28_RS11295 63c04d54bf807a48acef8e3f55a73e23 370 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 3.2E-130 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CHH28_RS11295 63c04d54bf807a48acef8e3f55a73e23 370 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.865 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CHH28_RS11295 63c04d54bf807a48acef8e3f55a73e23 370 SUPERFAMILY SSF51717 17 207 1.26E-9 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CHH28_RS11295 63c04d54bf807a48acef8e3f55a73e23 370 PIRSF PIRSF004640 1 362 6.7E-148 T 29-03-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CHH28_RS11295 63c04d54bf807a48acef8e3f55a73e23 370 Pfam PF04551 GcpE protein 13 352 1.0E-134 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CHH28_RS11295 63c04d54bf807a48acef8e3f55a73e23 370 Gene3D G3DSA:3.20.20.120 18 207 1.1E-19 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CHH28_RS07925 326925c43ac31fbc9386f501cb3f4e1d 102 SUPERFAMILY SSF46689 6 88 4.3E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS07925 326925c43ac31fbc9386f501cb3f4e1d 102 Gene3D G3DSA:1.10.10.60 11 90 1.1E-16 T 29-03-2018 CHH28_RS07925 326925c43ac31fbc9386f501cb3f4e1d 102 Pfam PF01527 Transposase 5 78 2.2E-12 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CHH28_RS16505 a3145babc5ee3598f1b25a35108760d6 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 1.7E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS16505 a3145babc5ee3598f1b25a35108760d6 287 Gene3D G3DSA:1.10.10.10 3 84 2.1E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS16505 a3145babc5ee3598f1b25a35108760d6 287 Pfam PF03466 LysR substrate binding domain 89 285 3.9E-42 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS16505 a3145babc5ee3598f1b25a35108760d6 287 SUPERFAMILY SSF46785 3 112 3.05E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS16505 a3145babc5ee3598f1b25a35108760d6 287 Gene3D G3DSA:3.40.190.10 89 176 3.8E-15 T 29-03-2018 CHH28_RS16505 a3145babc5ee3598f1b25a35108760d6 287 Gene3D G3DSA:3.40.190.10 177 256 4.4E-25 T 29-03-2018 CHH28_RS16505 a3145babc5ee3598f1b25a35108760d6 287 SUPERFAMILY SSF53850 89 285 7.78E-43 T 29-03-2018 CHH28_RS17535 53bb6af10ec310032fdd4d2677f1d392 193 Gene3D G3DSA:2.70.40.10 2 167 8.6E-46 T 29-03-2018 CHH28_RS17535 53bb6af10ec310032fdd4d2677f1d392 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 6.6E-64 T 29-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 CHH28_RS17535 53bb6af10ec310032fdd4d2677f1d392 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 34.249 T 29-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 CHH28_RS17535 53bb6af10ec310032fdd4d2677f1d392 193 SUPERFAMILY SSF51283 1 193 2.92E-59 T 29-03-2018 IPR029054 dUTPase-like CHH28_RS17535 53bb6af10ec310032fdd4d2677f1d392 193 Pfam PF00692 dUTPase 78 185 2.3E-12 T 29-03-2018 IPR029054 dUTPase-like CHH28_RS08405 e77bbc47ec28daf2405bdc7fe467eeb3 216 Pfam PF01965 DJ-1/PfpI family 15 189 2.8E-8 T 29-03-2018 IPR002818 DJ-1/PfpI CHH28_RS08405 e77bbc47ec28daf2405bdc7fe467eeb3 216 Gene3D G3DSA:3.40.50.880 2 216 3.2E-39 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS08405 e77bbc47ec28daf2405bdc7fe467eeb3 216 SUPERFAMILY SSF52317 1 215 4.42E-62 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS08405 e77bbc47ec28daf2405bdc7fe467eeb3 216 PIRSF PIRSF006320 1 216 1.3E-102 T 29-03-2018 IPR026041 Glyoxalase ElbB CHH28_RS14510 76f84b7baf04dd62e9cf3974998c1950 348 PIRSF PIRSF002786 5 329 2.2E-58 T 29-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 CHH28_RS14510 76f84b7baf04dd62e9cf3974998c1950 348 Gene3D G3DSA:3.30.1300.30 31 151 1.8E-18 T 29-03-2018 CHH28_RS14510 76f84b7baf04dd62e9cf3974998c1950 348 Pfam PF03934 Type II secretion system (T2SS), protein K 37 315 4.5E-64 T 29-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 CHH28_RS14510 76f84b7baf04dd62e9cf3974998c1950 348 SUPERFAMILY SSF158544 207 259 3.4E-5 T 29-03-2018 CHH28_RS14510 76f84b7baf04dd62e9cf3974998c1950 348 Gene3D G3DSA:1.10.40.60 208 267 3.8E-14 T 29-03-2018 CHH28_RS14510 76f84b7baf04dd62e9cf3974998c1950 348 SUPERFAMILY SSF54523 285 314 2.35E-13 T 29-03-2018 CHH28_RS14510 76f84b7baf04dd62e9cf3974998c1950 348 SUPERFAMILY SSF54523 41 107 2.35E-13 T 29-03-2018 CHH28_RS14510 76f84b7baf04dd62e9cf3974998c1950 348 SUPERFAMILY SSF158544 108 204 4.71E-14 T 29-03-2018 CHH28_RS15215 28b22064d555bb65d2133a68b1e96dbb 445 SMART SM00267 271 439 8.7E-48 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS15215 28b22064d555bb65d2133a68b1e96dbb 445 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 281 437 5.7E-47 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS15215 28b22064d555bb65d2133a68b1e96dbb 445 SUPERFAMILY SSF52172 151 284 3.27E-27 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS15215 28b22064d555bb65d2133a68b1e96dbb 445 Pfam PF00072 Response regulator receiver domain 156 268 4.5E-18 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS15215 28b22064d555bb65d2133a68b1e96dbb 445 Gene3D G3DSA:3.40.50.2300 40 146 6.3E-7 T 29-03-2018 CHH28_RS15215 28b22064d555bb65d2133a68b1e96dbb 445 SUPERFAMILY SSF52172 42 149 1.57E-7 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS15215 28b22064d555bb65d2133a68b1e96dbb 445 SUPERFAMILY SSF55073 287 437 1.73E-42 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS15215 28b22064d555bb65d2133a68b1e96dbb 445 SMART SM00448 154 268 1.0E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS15215 28b22064d555bb65d2133a68b1e96dbb 445 Gene3D G3DSA:3.40.50.2300 147 278 5.4E-23 T 29-03-2018 CHH28_RS15215 28b22064d555bb65d2133a68b1e96dbb 445 Gene3D G3DSA:3.30.70.270 279 440 1.4E-50 T 29-03-2018 CHH28_RS15215 28b22064d555bb65d2133a68b1e96dbb 445 Pfam PF00990 Diguanylate cyclase, GGDEF domain 283 434 6.1E-41 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS00375 5a7a91145b4fb75b6a6db421acb153d7 239 Gene3D G3DSA:3.40.50.300 1 229 5.8E-51 T 29-03-2018 CHH28_RS00375 5a7a91145b4fb75b6a6db421acb153d7 239 Pfam PF13500 AAA domain 4 217 1.5E-33 T 29-03-2018 CHH28_RS00375 5a7a91145b4fb75b6a6db421acb153d7 239 SUPERFAMILY SSF52540 1 230 1.53E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS00375 5a7a91145b4fb75b6a6db421acb153d7 239 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 234 26.44 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CHH28_RS00375 5a7a91145b4fb75b6a6db421acb153d7 239 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 181 1.5E-39 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CHH28_RS00375 5a7a91145b4fb75b6a6db421acb153d7 239 PIRSF PIRSF006755 1 237 3.9E-62 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CHH28_RS06380 ab58620cec8b48119deec9865e0c0f45 95 Pfam PF12823 Domain of unknown function (DUF3817) 2 85 1.9E-15 T 29-03-2018 IPR023845 Domain of unknown function DUF3817, transmembrane CHH28_RS06380 ab58620cec8b48119deec9865e0c0f45 95 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 4 81 1.5E-15 T 29-03-2018 IPR023845 Domain of unknown function DUF3817, transmembrane CHH28_RS09335 aad5ee9ee5f80a770f06f5d354783e7e 252 Gene3D G3DSA:1.10.10.10 147 245 2.7E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS09335 aad5ee9ee5f80a770f06f5d354783e7e 252 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 200 6.2E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS09335 aad5ee9ee5f80a770f06f5d354783e7e 252 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 200 216 6.2E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS09335 aad5ee9ee5f80a770f06f5d354783e7e 252 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 216 228 6.2E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS09335 aad5ee9ee5f80a770f06f5d354783e7e 252 SUPERFAMILY SSF46894 167 242 6.12E-22 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CHH28_RS09335 aad5ee9ee5f80a770f06f5d354783e7e 252 ProSitePatterns PS00622 LuxR-type HTH domain signature. 200 227 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS09335 aad5ee9ee5f80a770f06f5d354783e7e 252 SMART SM00421 183 240 2.2E-23 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS09335 aad5ee9ee5f80a770f06f5d354783e7e 252 Pfam PF00196 Bacterial regulatory proteins, luxR family 185 240 5.6E-22 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS06140 ed412d17a3d9822506eca28b2b58be45 333 Gene3D G3DSA:3.30.1360.10 111 230 2.7E-24 T 29-03-2018 CHH28_RS06140 ed412d17a3d9822506eca28b2b58be45 333 Gene3D G3DSA:3.30.1360.10 4 90 1.7E-18 T 29-03-2018 CHH28_RS06140 ed412d17a3d9822506eca28b2b58be45 333 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 35.041 T 29-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS06140 ed412d17a3d9822506eca28b2b58be45 333 SUPERFAMILY SSF47789 250 324 5.1E-26 T 29-03-2018 CHH28_RS06140 ed412d17a3d9822506eca28b2b58be45 333 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 328 7.0E-35 T 29-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS06140 ed412d17a3d9822506eca28b2b58be45 333 SUPERFAMILY SSF55257 6 53 9.42E-30 T 29-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS06140 ed412d17a3d9822506eca28b2b58be45 333 SUPERFAMILY SSF55257 178 232 9.42E-30 T 29-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS06140 ed412d17a3d9822506eca28b2b58be45 333 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 3.2E-22 T 29-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS06140 ed412d17a3d9822506eca28b2b58be45 333 Gene3D G3DSA:1.10.150.20 244 327 4.2E-29 T 29-03-2018 CHH28_RS06140 ed412d17a3d9822506eca28b2b58be45 333 SUPERFAMILY SSF56553 53 177 2.09E-41 T 29-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS06140 ed412d17a3d9822506eca28b2b58be45 333 SMART SM00662 23 233 1.3E-92 T 29-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS06140 ed412d17a3d9822506eca28b2b58be45 333 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 315 4.8E-109 T 29-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS06140 ed412d17a3d9822506eca28b2b58be45 333 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 244 307 4.3E-24 T 29-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS06140 ed412d17a3d9822506eca28b2b58be45 333 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 64 154 8.2E-24 T 29-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS14125 b9c20c834a01512641e586546f966de2 341 SUPERFAMILY SSF48179 179 331 1.51E-50 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CHH28_RS14125 b9c20c834a01512641e586546f966de2 341 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 159 3.6E-48 T 29-03-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CHH28_RS14125 b9c20c834a01512641e586546f966de2 341 SUPERFAMILY SSF51735 6 178 2.49E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS14125 b9c20c834a01512641e586546f966de2 341 Gene3D G3DSA:3.40.50.720 2 179 4.0E-41 T 29-03-2018 CHH28_RS14125 b9c20c834a01512641e586546f966de2 341 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 188 209 - T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CHH28_RS14125 b9c20c834a01512641e586546f966de2 341 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 180 319 6.2E-48 T 29-03-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CHH28_RS14125 b9c20c834a01512641e586546f966de2 341 Gene3D G3DSA:1.10.1040.10 180 330 7.9E-49 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CHH28_RS14125 b9c20c834a01512641e586546f966de2 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 173 197 9.8E-43 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CHH28_RS14125 b9c20c834a01512641e586546f966de2 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 198 222 9.8E-43 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CHH28_RS14125 b9c20c834a01512641e586546f966de2 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 238 255 9.8E-43 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CHH28_RS14125 b9c20c834a01512641e586546f966de2 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 9.8E-43 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CHH28_RS14125 b9c20c834a01512641e586546f966de2 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 133 153 9.8E-43 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CHH28_RS14125 b9c20c834a01512641e586546f966de2 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 9.8E-43 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CHH28_RS14125 b9c20c834a01512641e586546f966de2 341 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 322 34.573 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CHH28_RS14125 b9c20c834a01512641e586546f966de2 341 PIRSF PIRSF000114 3 332 3.3E-104 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CHH28_RS04900 0e2a45097af4b41d402b519f23ba9d58 690 Gene3D G3DSA:2.170.130.10 16 155 4.3E-24 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS04900 0e2a45097af4b41d402b519f23ba9d58 690 Pfam PF07715 TonB-dependent Receptor Plug Domain 39 145 3.1E-16 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS04900 0e2a45097af4b41d402b519f23ba9d58 690 Pfam PF00593 TonB dependent receptor 237 686 1.9E-26 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS04900 0e2a45097af4b41d402b519f23ba9d58 690 SUPERFAMILY SSF56935 18 690 3.36E-97 T 29-03-2018 CHH28_RS04900 0e2a45097af4b41d402b519f23ba9d58 690 Gene3D G3DSA:2.40.170.20 156 690 6.5E-54 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS09085 f25a6917f03d0662a8f04a8ce756df89 423 Pfam PF01117 Aerolysin toxin 39 395 8.4E-120 T 29-03-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 CHH28_RS09085 f25a6917f03d0662a8f04a8ce756df89 423 SUPERFAMILY SSF56973 31 379 2.22E-82 T 29-03-2018 CHH28_RS09085 f25a6917f03d0662a8f04a8ce756df89 423 PRINTS PR00754 Aerolysin signature 59 81 1.3E-16 T 29-03-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 CHH28_RS09085 f25a6917f03d0662a8f04a8ce756df89 423 PRINTS PR00754 Aerolysin signature 262 285 1.3E-16 T 29-03-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 CHH28_RS09085 f25a6917f03d0662a8f04a8ce756df89 423 PRINTS PR00754 Aerolysin signature 190 214 1.3E-16 T 29-03-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 CHH28_RS09085 f25a6917f03d0662a8f04a8ce756df89 423 SMART SM00999 39 404 8.6E-188 T 29-03-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 CHH28_RS09085 f25a6917f03d0662a8f04a8ce756df89 423 Gene3D G3DSA:3.30.412.10 207 336 3.5E-30 T 29-03-2018 CHH28_RS09085 f25a6917f03d0662a8f04a8ce756df89 423 Gene3D G3DSA:3.30.412.10 37 193 3.8E-27 T 29-03-2018 CHH28_RS01760 1d4ad3047a5edc606f09ea99bdcfa1e9 92 Pfam PF04362 Bacterial Fe(2+) trafficking 1 87 1.1E-38 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CHH28_RS01760 1d4ad3047a5edc606f09ea99bdcfa1e9 92 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 73 2.0E-23 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CHH28_RS01760 1d4ad3047a5edc606f09ea99bdcfa1e9 92 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 24.897 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CHH28_RS01760 1d4ad3047a5edc606f09ea99bdcfa1e9 92 PIRSF PIRSF029827 1 90 2.0E-35 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CHH28_RS01760 1d4ad3047a5edc606f09ea99bdcfa1e9 92 Gene3D G3DSA:1.10.3880.10 2 89 1.4E-38 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CHH28_RS01760 1d4ad3047a5edc606f09ea99bdcfa1e9 92 SUPERFAMILY SSF111148 1 90 3.14E-37 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CHH28_RS00220 6156e47c22cf33a5245d002c822fb5de 446 Pfam PF04055 Radical SAM superfamily 150 324 1.1E-28 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CHH28_RS00220 6156e47c22cf33a5245d002c822fb5de 446 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 441 72.926 T 29-03-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CHH28_RS00220 6156e47c22cf33a5245d002c822fb5de 446 Gene3D G3DSA:3.80.30.20 143 380 1.4E-53 T 29-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe CHH28_RS00220 6156e47c22cf33a5245d002c822fb5de 446 SMART SM00729 146 366 4.7E-58 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CHH28_RS00220 6156e47c22cf33a5245d002c822fb5de 446 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 1.4E-179 T 29-03-2018 CHH28_RS00220 6156e47c22cf33a5245d002c822fb5de 446 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CHH28_RS00220 6156e47c22cf33a5245d002c822fb5de 446 Pfam PF01938 TRAM domain 377 440 1.5E-16 T 29-03-2018 IPR002792 TRAM domain CHH28_RS00220 6156e47c22cf33a5245d002c822fb5de 446 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 7.7E-151 T 29-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CHH28_RS00220 6156e47c22cf33a5245d002c822fb5de 446 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 3.7E-29 T 29-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CHH28_RS00220 6156e47c22cf33a5245d002c822fb5de 446 SUPERFAMILY SSF102114 117 371 7.32E-62 T 29-03-2018 CHH28_RS01725 c98e2d1490fa2cf9276a24b72604c843 213 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 208 3.8E-64 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CHH28_RS01725 c98e2d1490fa2cf9276a24b72604c843 213 Gene3D G3DSA:3.40.50.880 1 211 5.7E-41 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS01725 c98e2d1490fa2cf9276a24b72604c843 213 SUPERFAMILY SSF52317 3 209 2.68E-53 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS01725 c98e2d1490fa2cf9276a24b72604c843 213 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 4 209 34.187 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CHH28_RS01725 c98e2d1490fa2cf9276a24b72604c843 213 Pfam PF00117 Glutamine amidotransferase class-I 7 207 9.6E-21 T 29-03-2018 IPR017926 Glutamine amidotransferase CHH28_RS01725 c98e2d1490fa2cf9276a24b72604c843 213 PIRSF PIRSF000495 3 212 9.0E-67 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CHH28_RS04580 58d8bb2f94e505a5ab7f277c34433542 228 Pfam PF00072 Response regulator receiver domain 7 113 1.7E-18 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS04580 58d8bb2f94e505a5ab7f277c34433542 228 Gene3D G3DSA:1.10.10.10 120 228 4.1E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04580 58d8bb2f94e505a5ab7f277c34433542 228 SUPERFAMILY SSF52172 5 163 5.13E-29 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS04580 58d8bb2f94e505a5ab7f277c34433542 228 Gene3D G3DSA:3.40.50.2300 1 119 1.5E-26 T 29-03-2018 CHH28_RS04580 58d8bb2f94e505a5ab7f277c34433542 228 SMART SM00862 146 225 9.1E-13 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS04580 58d8bb2f94e505a5ab7f277c34433542 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 225 1.2E-13 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS04580 58d8bb2f94e505a5ab7f277c34433542 228 SUPERFAMILY SSF46894 132 225 3.06E-14 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CHH28_RS04580 58d8bb2f94e505a5ab7f277c34433542 228 SMART SM00448 5 113 2.9E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS16750 8eef7fdb657cc7c6f553d44a346bcfe5 717 Gene3D G3DSA:3.40.190.10 276 428 5.8E-22 T 29-03-2018 CHH28_RS16750 8eef7fdb657cc7c6f553d44a346bcfe5 717 PIRSF PIRSF002741 3 88 0.79 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CHH28_RS16750 8eef7fdb657cc7c6f553d44a346bcfe5 717 PIRSF PIRSF002741 165 676 1.2E-50 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CHH28_RS16750 8eef7fdb657cc7c6f553d44a346bcfe5 717 SUPERFAMILY SSF53850 30 130 2.99E-79 T 29-03-2018 CHH28_RS16750 8eef7fdb657cc7c6f553d44a346bcfe5 717 SUPERFAMILY SSF53850 166 657 2.99E-79 T 29-03-2018 CHH28_RS16750 8eef7fdb657cc7c6f553d44a346bcfe5 717 Gene3D G3DSA:3.10.105.10 429 642 8.8E-40 T 29-03-2018 CHH28_RS16750 8eef7fdb657cc7c6f553d44a346bcfe5 717 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 581 2.4E-52 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CHH28_RS16750 8eef7fdb657cc7c6f553d44a346bcfe5 717 Gene3D G3DSA:3.90.76.10 46 275 7.0E-26 T 29-03-2018 CHH28_RS18255 98727b5f8c62284784b737d282afc40f 540 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 377 387 - T 29-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site CHH28_RS18255 98727b5f8c62284784b737d282afc40f 540 Pfam PF00082 Subtilase family 127 415 3.1E-48 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS18255 98727b5f8c62284784b737d282afc40f 540 SUPERFAMILY SSF52743 196 440 4.71E-73 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS18255 98727b5f8c62284784b737d282afc40f 540 SUPERFAMILY SSF52743 54 160 4.71E-73 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS18255 98727b5f8c62284784b737d282afc40f 540 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 198 208 - T 29-03-2018 IPR022398 Peptidase S8, subtilisin, His-active site CHH28_RS18255 98727b5f8c62284784b737d282afc40f 540 Gene3D G3DSA:3.30.70.80 3 94 7.3E-4 T 29-03-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 CHH28_RS18255 98727b5f8c62284784b737d282afc40f 540 PRINTS PR00723 Subtilisin serine protease family (S8) signature 194 207 9.1E-17 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CHH28_RS18255 98727b5f8c62284784b737d282afc40f 540 PRINTS PR00723 Subtilisin serine protease family (S8) signature 376 392 9.1E-17 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CHH28_RS18255 98727b5f8c62284784b737d282afc40f 540 PRINTS PR00723 Subtilisin serine protease family (S8) signature 127 146 9.1E-17 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CHH28_RS18255 98727b5f8c62284784b737d282afc40f 540 Gene3D G3DSA:3.40.50.200 95 440 2.3E-78 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS03390 406e33a1e2b7d8713465b96a0f5a2240 341 Gene3D G3DSA:3.40.50.720 111 239 4.3E-11 T 29-03-2018 CHH28_RS03390 406e33a1e2b7d8713465b96a0f5a2240 341 SUPERFAMILY SSF51735 120 242 7.38E-10 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS03390 406e33a1e2b7d8713465b96a0f5a2240 341 Gene3D G3DSA:1.10.287.70 5 109 7.4E-13 T 29-03-2018 CHH28_RS03390 406e33a1e2b7d8713465b96a0f5a2240 341 SUPERFAMILY SSF81324 10 131 3.01E-15 T 29-03-2018 CHH28_RS03390 406e33a1e2b7d8713465b96a0f5a2240 341 Pfam PF07885 Ion channel 27 101 8.8E-13 T 29-03-2018 IPR013099 Potassium channel domain CHH28_RS09845 29b56477e3b2822a1ff2113fd34c01fa 495 Gene3D G3DSA:3.50.50.60 169 428 1.2E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS09845 29b56477e3b2822a1ff2113fd34c01fa 495 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 175 199 6.2E-5 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CHH28_RS09845 29b56477e3b2822a1ff2113fd34c01fa 495 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 6.2E-5 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CHH28_RS09845 29b56477e3b2822a1ff2113fd34c01fa 495 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 9 234 1.7E-12 T 29-03-2018 CHH28_RS09845 29b56477e3b2822a1ff2113fd34c01fa 495 SUPERFAMILY SSF51905 281 415 2.36E-12 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS09845 29b56477e3b2822a1ff2113fd34c01fa 495 Gene3D G3DSA:3.50.50.60 5 168 1.6E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS09845 29b56477e3b2822a1ff2113fd34c01fa 495 SUPERFAMILY SSF51905 6 302 3.24E-47 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS15365 11830616f9b930b0f75ae0e56538fa91 494 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 493 82.816 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CHH28_RS15365 11830616f9b930b0f75ae0e56538fa91 494 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 461 8.2E-184 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CHH28_RS15365 11830616f9b930b0f75ae0e56538fa91 494 Pfam PF00571 CBS domain 148 200 0.0032 T 29-03-2018 IPR000644 CBS domain CHH28_RS15365 11830616f9b930b0f75ae0e56538fa91 494 Pfam PF00571 CBS domain 96 139 1.0E-10 T 29-03-2018 IPR000644 CBS domain CHH28_RS15365 11830616f9b930b0f75ae0e56538fa91 494 PIRSF PIRSF000130 1 494 5.1E-198 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CHH28_RS15365 11830616f9b930b0f75ae0e56538fa91 494 SUPERFAMILY SSF54631 95 202 8.46E-26 T 29-03-2018 CHH28_RS15365 11830616f9b930b0f75ae0e56538fa91 494 SMART SM01240 7 480 0.0 T 29-03-2018 CHH28_RS15365 11830616f9b930b0f75ae0e56538fa91 494 SMART SM00116 157 205 0.0029 T 29-03-2018 IPR000644 CBS domain CHH28_RS15365 11830616f9b930b0f75ae0e56538fa91 494 SMART SM00116 96 143 1.2E-10 T 29-03-2018 IPR000644 CBS domain CHH28_RS15365 11830616f9b930b0f75ae0e56538fa91 494 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 480 8.3E-159 T 29-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CHH28_RS15365 11830616f9b930b0f75ae0e56538fa91 494 SUPERFAMILY SSF51412 216 484 2.09E-121 T 29-03-2018 CHH28_RS15365 11830616f9b930b0f75ae0e56538fa91 494 SUPERFAMILY SSF51412 1 90 2.09E-121 T 29-03-2018 CHH28_RS15365 11830616f9b930b0f75ae0e56538fa91 494 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 299 311 - T 29-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CHH28_RS15365 11830616f9b930b0f75ae0e56538fa91 494 Gene3D G3DSA:3.20.20.70 1 491 9.2E-114 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS18315 cd83e55630549ed57a9ca27cb13fb0c6 294 Pfam PF01513 ATP-NAD kinase 6 272 3.8E-65 T 29-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CHH28_RS18315 cd83e55630549ed57a9ca27cb13fb0c6 294 Gene3D G3DSA:2.60.200.30 142 265 1.5E-40 T 29-03-2018 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CHH28_RS18315 cd83e55630549ed57a9ca27cb13fb0c6 294 Hamap MF_00361 NAD kinase [nadK]. 5 288 34.604 T 29-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CHH28_RS18315 cd83e55630549ed57a9ca27cb13fb0c6 294 Gene3D G3DSA:3.40.50.10330 1 141 3.1E-36 T 29-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 CHH28_RS18315 cd83e55630549ed57a9ca27cb13fb0c6 294 SUPERFAMILY SSF111331 6 290 1.07E-89 T 29-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 Gene3D G3DSA:1.10.10.10 155 205 1.5E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 SUPERFAMILY SSF88659 216 314 1.78E-24 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 Pfam PF00140 Sigma-70 factor, region 1.2 47 79 2.7E-13 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 Gene3D G3DSA:1.10.10.10 247 317 4.4E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 SUPERFAMILY SSF88946 47 155 3.27E-44 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 319 40.099 T 29-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 Pfam PF04542 Sigma-70 region 2 85 154 1.6E-20 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 Pfam PF04545 Sigma-70, region 4 253 306 1.2E-15 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 SUPERFAMILY SSF88659 158 232 2.49E-15 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 PRINTS PR00046 Major sigma-70 factor signature 278 293 3.1E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 PRINTS PR00046 Major sigma-70 factor signature 293 304 3.1E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 PRINTS PR00046 Major sigma-70 factor signature 133 141 3.1E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 PRINTS PR00046 Major sigma-70 factor signature 257 269 3.1E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 PRINTS PR00046 Major sigma-70 factor signature 109 122 3.1E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 Pfam PF04539 Sigma-70 region 3 165 239 1.4E-22 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 278 304 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 82 307 1.6E-35 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 39 319 2.4E-138 T 29-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 109 122 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS08775 13f2008ac1bade19fa16805e4bf6aa9e 322 Gene3D G3DSA:1.10.601.10 1 154 9.7E-60 T 29-03-2018 CHH28_RS19140 a5ee0de9be65c0b1e5c38d1141882293 267 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 219 261 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CHH28_RS19140 a5ee0de9be65c0b1e5c38d1141882293 267 Gene3D G3DSA:2.60.120.10 14 114 9.9E-9 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS19140 a5ee0de9be65c0b1e5c38d1141882293 267 Pfam PF02311 AraC-like ligand binding domain 20 142 1.4E-6 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CHH28_RS19140 a5ee0de9be65c0b1e5c38d1141882293 267 Gene3D G3DSA:1.10.10.60 219 267 1.5E-10 T 29-03-2018 CHH28_RS19140 a5ee0de9be65c0b1e5c38d1141882293 267 Gene3D G3DSA:1.10.10.60 115 218 2.1E-14 T 29-03-2018 CHH28_RS19140 a5ee0de9be65c0b1e5c38d1141882293 267 SUPERFAMILY SSF46689 170 216 2.3E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS19140 a5ee0de9be65c0b1e5c38d1141882293 267 SUPERFAMILY SSF51182 25 126 1.76E-8 T 29-03-2018 IPR011051 RmlC-like cupin domain CHH28_RS19140 a5ee0de9be65c0b1e5c38d1141882293 267 Pfam PF12833 Helix-turn-helix domain 188 266 2.0E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS19140 a5ee0de9be65c0b1e5c38d1141882293 267 SUPERFAMILY SSF46689 219 267 1.97E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS19140 a5ee0de9be65c0b1e5c38d1141882293 267 SMART SM00342 182 265 1.8E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS14645 fd974dcf62191c8a73de7ff44a74cd99 349 Gene3D G3DSA:2.160.10.20 166 239 4.7E-14 T 29-03-2018 CHH28_RS14645 fd974dcf62191c8a73de7ff44a74cd99 349 Gene3D G3DSA:2.160.10.20 2 73 3.6E-9 T 29-03-2018 CHH28_RS14645 fd974dcf62191c8a73de7ff44a74cd99 349 SUPERFAMILY SSF141571 2 161 1.57E-23 T 29-03-2018 CHH28_RS14645 fd974dcf62191c8a73de7ff44a74cd99 349 SUPERFAMILY SSF141571 249 326 2.09E-10 T 29-03-2018 CHH28_RS14645 fd974dcf62191c8a73de7ff44a74cd99 349 Gene3D G3DSA:2.160.20.80 240 345 5.0E-13 T 29-03-2018 CHH28_RS14645 fd974dcf62191c8a73de7ff44a74cd99 349 Gene3D G3DSA:2.160.10.20 74 165 1.1E-11 T 29-03-2018 CHH28_RS14645 fd974dcf62191c8a73de7ff44a74cd99 349 SUPERFAMILY SSF141571 130 268 2.22E-23 T 29-03-2018 CHH28_RS14645 fd974dcf62191c8a73de7ff44a74cd99 349 Pfam PF13599 Pentapeptide repeats (9 copies) 193 263 8.2E-13 T 29-03-2018 IPR001646 Pentapeptide repeat CHH28_RS14645 fd974dcf62191c8a73de7ff44a74cd99 349 Pfam PF13599 Pentapeptide repeats (9 copies) 85 158 2.7E-9 T 29-03-2018 IPR001646 Pentapeptide repeat CHH28_RS14645 fd974dcf62191c8a73de7ff44a74cd99 349 Pfam PF00805 Pentapeptide repeats (8 copies) 278 310 5.2E-6 T 29-03-2018 IPR001646 Pentapeptide repeat CHH28_RS14645 fd974dcf62191c8a73de7ff44a74cd99 349 Pfam PF00805 Pentapeptide repeats (8 copies) 31 63 2.7E-6 T 29-03-2018 IPR001646 Pentapeptide repeat CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 Gene3D G3DSA:3.30.450.20 318 438 1.2E-23 T 29-03-2018 CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 436 599 1.3E-43 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 Pfam PF00563 EAL domain 618 852 3.2E-71 T 29-03-2018 IPR001633 EAL domain CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 SUPERFAMILY SSF55785 326 438 1.08E-24 T 29-03-2018 IPR000014 PAS domain CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 Gene3D G3DSA:3.30.70.270 439 607 5.9E-60 T 29-03-2018 CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 Gene3D G3DSA:3.20.20.450 608 861 1.9E-92 T 29-03-2018 IPR001633 EAL domain CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 Gene3D G3DSA:3.30.450.20 185 317 8.9E-19 T 29-03-2018 CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 Gene3D G3DSA:3.30.450.40 35 184 0.0029 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 SMART SM00086 387 429 0.093 T 29-03-2018 IPR001610 PAC motif CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 SMART SM00086 265 307 0.9 T 29-03-2018 IPR001610 PAC motif CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 Pfam PF13426 PAS domain 326 427 3.7E-15 T 29-03-2018 IPR000014 PAS domain CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 SMART SM00091 315 381 5.9E-8 T 29-03-2018 IPR000014 PAS domain CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 SMART SM00091 191 259 4.8 T 29-03-2018 IPR000014 PAS domain CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 SUPERFAMILY SSF55785 201 307 9.77E-14 T 29-03-2018 IPR000014 PAS domain CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 Pfam PF00990 Diguanylate cyclase, GGDEF domain 440 597 8.6E-46 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 320 436 2.1E-14 T 29-03-2018 IPR000014 PAS domain CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 Pfam PF08447 PAS fold 213 295 9.9E-15 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 SMART SM00267 429 601 2.3E-59 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 SUPERFAMILY SSF55073 445 603 1.1E-47 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 SUPERFAMILY SSF141868 618 863 5.36E-81 T 29-03-2018 IPR001633 EAL domain CHH28_RS18440 78c36bdc7d1081ffe025202b4e071575 867 SMART SM00052 611 857 2.3E-105 T 29-03-2018 IPR001633 EAL domain CHH28_RS16135 3853592e3773351234b6ddb3b88ac5c5 224 Pfam PF02525 Flavodoxin-like fold 18 214 3.7E-35 T 29-03-2018 IPR003680 Flavodoxin-like fold CHH28_RS16135 3853592e3773351234b6ddb3b88ac5c5 224 SUPERFAMILY SSF52218 1 216 4.04E-38 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS16135 3853592e3773351234b6ddb3b88ac5c5 224 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 217 24.699 T 29-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 CHH28_RS16135 3853592e3773351234b6ddb3b88ac5c5 224 Gene3D G3DSA:3.40.50.360 3 218 6.4E-33 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS04385 c585d14af738655d0119481f54249563 96 SMART SM01234 16 83 9.2E-42 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CHH28_RS04385 c585d14af738655d0119481f54249563 96 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 31 83 2.0E-17 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CHH28_RS04385 c585d14af738655d0119481f54249563 96 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 16 84 23.486 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CHH28_RS04385 c585d14af738655d0119481f54249563 96 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 20 89 1.0E-26 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CHH28_RS04385 c585d14af738655d0119481f54249563 96 Pfam PF01809 Haemolytic domain 20 83 1.1E-29 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CHH28_RS11230 62e4cd704247b9d28b999dbff6396523 309 Pfam PF00005 ABC transporter 17 160 4.3E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS11230 62e4cd704247b9d28b999dbff6396523 309 SMART SM00382 26 209 6.4E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS11230 62e4cd704247b9d28b999dbff6396523 309 SUPERFAMILY SSF52540 2 226 4.69E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11230 62e4cd704247b9d28b999dbff6396523 309 Gene3D G3DSA:3.40.50.300 1 261 1.4E-62 T 29-03-2018 CHH28_RS10565 72876b2fc599cc18742d5e0cfa9a6463 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 1.0E-253 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CHH28_RS10565 72876b2fc599cc18742d5e0cfa9a6463 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 1.4E-94 T 29-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CHH28_RS10565 72876b2fc599cc18742d5e0cfa9a6463 547 Gene3D G3DSA:1.10.560.10 1 184 4.9E-43 T 29-03-2018 IPR027413 GroEL-like equatorial domain CHH28_RS10565 72876b2fc599cc18742d5e0cfa9a6463 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 29-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CHH28_RS10565 72876b2fc599cc18742d5e0cfa9a6463 547 PRINTS PR00298 60kDa chaperonin signature 27 53 4.9E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CHH28_RS10565 72876b2fc599cc18742d5e0cfa9a6463 547 PRINTS PR00298 60kDa chaperonin signature 83 110 4.9E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CHH28_RS10565 72876b2fc599cc18742d5e0cfa9a6463 547 PRINTS PR00298 60kDa chaperonin signature 398 419 4.9E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CHH28_RS10565 72876b2fc599cc18742d5e0cfa9a6463 547 PRINTS PR00298 60kDa chaperonin signature 350 375 4.9E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CHH28_RS10565 72876b2fc599cc18742d5e0cfa9a6463 547 PRINTS PR00298 60kDa chaperonin signature 268 291 4.9E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CHH28_RS10565 72876b2fc599cc18742d5e0cfa9a6463 547 SUPERFAMILY SSF52029 184 376 8.67E-85 T 29-03-2018 IPR027409 GroEL-like apical domain CHH28_RS10565 72876b2fc599cc18742d5e0cfa9a6463 547 SUPERFAMILY SSF48592 406 520 2.75E-75 T 29-03-2018 CHH28_RS10565 72876b2fc599cc18742d5e0cfa9a6463 547 SUPERFAMILY SSF48592 7 134 2.75E-75 T 29-03-2018 CHH28_RS10565 72876b2fc599cc18742d5e0cfa9a6463 547 Gene3D G3DSA:3.50.7.10 185 373 1.3E-98 T 29-03-2018 IPR027409 GroEL-like apical domain CHH28_RS10565 72876b2fc599cc18742d5e0cfa9a6463 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 41.912 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CHH28_RS10565 72876b2fc599cc18742d5e0cfa9a6463 547 Gene3D G3DSA:1.10.560.10 374 515 6.6E-24 T 29-03-2018 IPR027413 GroEL-like equatorial domain CHH28_RS10565 72876b2fc599cc18742d5e0cfa9a6463 547 SUPERFAMILY SSF54849 137 205 5.26E-25 T 29-03-2018 CHH28_RS15575 6b704988aacde305ae051ab8d66fd1b4 254 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 243 4.8E-93 T 29-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CHH28_RS15575 6b704988aacde305ae051ab8d66fd1b4 254 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 2 251 43.071 T 29-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CHH28_RS15575 6b704988aacde305ae051ab8d66fd1b4 254 Pfam PF02348 Cytidylyltransferase 6 224 4.6E-56 T 29-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CHH28_RS15575 6b704988aacde305ae051ab8d66fd1b4 254 SUPERFAMILY SSF53448 4 249 8.11E-61 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS15575 6b704988aacde305ae051ab8d66fd1b4 254 Gene3D G3DSA:3.90.550.10 3 254 3.4E-49 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS07495 3b309f42bfc152263b11c64ad02c7bbe 176 Pfam PF00583 Acetyltransferase (GNAT) family 44 141 2.4E-19 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS07495 3b309f42bfc152263b11c64ad02c7bbe 176 Gene3D G3DSA:3.40.630.30 1 170 1.1E-32 T 29-03-2018 CHH28_RS07495 3b309f42bfc152263b11c64ad02c7bbe 176 SUPERFAMILY SSF55729 1 167 7.2E-35 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS14260 e18cae70a3a911c6e3b39c163017c6e5 149 Gene3D G3DSA:3.90.79.10 1 149 1.2E-29 T 29-03-2018 CHH28_RS14260 e18cae70a3a911c6e3b39c163017c6e5 149 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CHH28_RS14260 e18cae70a3a911c6e3b39c163017c6e5 149 SUPERFAMILY SSF55811 3 140 2.57E-29 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CHH28_RS14260 e18cae70a3a911c6e3b39c163017c6e5 149 Pfam PF00293 NUDIX domain 9 118 1.7E-13 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CHH28_RS17600 2c32a30242b928ddaa03a7aab08582c9 148 Pfam PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ 6 144 1.3E-66 T 29-03-2018 IPR019884 YtoQ family protein CHH28_RS17600 2c32a30242b928ddaa03a7aab08582c9 148 TIGRFAM TIGR03646 YtoQ_fam: YtoQ family protein 3 145 6.3E-66 T 29-03-2018 IPR019884 YtoQ family protein CHH28_RS17600 2c32a30242b928ddaa03a7aab08582c9 148 Gene3D G3DSA:3.40.50.450 1 147 1.2E-20 T 29-03-2018 CHH28_RS18070 7b1e942382a16f78bbb1fe8cd61dc1e3 292 Gene3D G3DSA:2.70.98.10 2 292 7.0E-58 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CHH28_RS18070 7b1e942382a16f78bbb1fe8cd61dc1e3 292 SUPERFAMILY SSF74650 8 290 8.79E-54 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CHH28_RS18070 7b1e942382a16f78bbb1fe8cd61dc1e3 292 Pfam PF01263 Aldose 1-epimerase 20 291 2.4E-36 T 29-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CHH28_RS18070 7b1e942382a16f78bbb1fe8cd61dc1e3 292 PIRSF PIRSF016020 3 292 1.5E-58 T 29-03-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 CHH28_RS10105 37869cc19030d4320d0835dab5e2049f 225 Gene3D G3DSA:1.10.10.10 126 225 1.1E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS10105 37869cc19030d4320d0835dab5e2049f 225 SMART SM00862 146 221 8.0E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS10105 37869cc19030d4320d0835dab5e2049f 225 Pfam PF00072 Response regulator receiver domain 3 112 1.3E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS10105 37869cc19030d4320d0835dab5e2049f 225 Gene3D G3DSA:3.40.50.2300 1 125 1.2E-30 T 29-03-2018 CHH28_RS10105 37869cc19030d4320d0835dab5e2049f 225 SMART SM00448 1 112 4.4E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS10105 37869cc19030d4320d0835dab5e2049f 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 5.3E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS10105 37869cc19030d4320d0835dab5e2049f 225 SUPERFAMILY SSF52172 2 177 2.41E-35 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS07100 182ee17aece595ec48d8ac4d940aaed4 121 Pfam PF07883 Cupin domain 29 94 3.2E-15 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CHH28_RS07100 182ee17aece595ec48d8ac4d940aaed4 121 SUPERFAMILY SSF51182 1 110 7.92E-26 T 29-03-2018 IPR011051 RmlC-like cupin domain CHH28_RS07100 182ee17aece595ec48d8ac4d940aaed4 121 Gene3D G3DSA:2.60.120.10 1 105 1.4E-21 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS18620 054249e8c3ccab34f1ab2125cd8bd224 155 Pfam PF00578 AhpC/TSA family 6 134 6.1E-40 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CHH28_RS18620 054249e8c3ccab34f1ab2125cd8bd224 155 PIRSF PIRSF000239 1 155 1.8E-23 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CHH28_RS18620 054249e8c3ccab34f1ab2125cd8bd224 155 SUPERFAMILY SSF52833 5 155 3.07E-52 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS18620 054249e8c3ccab34f1ab2125cd8bd224 155 Gene3D G3DSA:3.40.30.10 1 155 1.2E-41 T 29-03-2018 CHH28_RS02990 4f91494538f0e82b200bfd465e96ccb7 78 Gene3D G3DSA:2.30.170.40 2 75 6.6E-31 T 29-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS02990 4f91494538f0e82b200bfd465e96ccb7 78 Pfam PF00830 Ribosomal L28 family 3 62 1.3E-27 T 29-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS02990 4f91494538f0e82b200bfd465e96ccb7 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 5.0E-27 T 29-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS02990 4f91494538f0e82b200bfd465e96ccb7 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 20.944 T 29-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS02990 4f91494538f0e82b200bfd465e96ccb7 78 SUPERFAMILY SSF143800 2 77 2.75E-32 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS11560 e79f6d45523bbaec4e55d91c3af298a0 182 SUPERFAMILY SSF111126 1 176 1.78E-44 T 29-03-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain CHH28_RS11560 e79f6d45523bbaec4e55d91c3af298a0 182 Gene3D G3DSA:3.90.1520.10 1 179 5.2E-36 T 29-03-2018 CHH28_RS11560 e79f6d45523bbaec4e55d91c3af298a0 182 Pfam PF07700 Haem-NO-binding 2 155 6.4E-37 T 29-03-2018 IPR011644 Heme-NO binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 CHH28_RS02850 8c542953da7cc803ad7b5c790b9a528a 490 ProSitePatterns PS00455 Putative AMP-binding domain signature. 136 147 - T 29-03-2018 IPR020845 AMP-binding, conserved site CHH28_RS02850 8c542953da7cc803ad7b5c790b9a528a 490 Gene3D G3DSA:3.30.300.30 385 489 4.7E-19 T 29-03-2018 CHH28_RS02850 8c542953da7cc803ad7b5c790b9a528a 490 Pfam PF13193 AMP-binding enzyme C-terminal domain 401 475 8.4E-8 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CHH28_RS02850 8c542953da7cc803ad7b5c790b9a528a 490 Pfam PF00501 AMP-binding enzyme 49 390 1.7E-66 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CHH28_RS02850 8c542953da7cc803ad7b5c790b9a528a 490 Gene3D G3DSA:3.40.50.980 143 294 3.5E-39 T 29-03-2018 CHH28_RS02850 8c542953da7cc803ad7b5c790b9a528a 490 Gene3D G3DSA:2.30.38.10 295 384 8.1E-18 T 29-03-2018 CHH28_RS02850 8c542953da7cc803ad7b5c790b9a528a 490 SUPERFAMILY SSF56801 45 487 8.9E-99 T 29-03-2018 CHH28_RS02850 8c542953da7cc803ad7b5c790b9a528a 490 Gene3D G3DSA:3.40.50.980 22 142 2.0E-15 T 29-03-2018 CHH28_RS17890 75d1958544efb1b405d8dbc338004918 286 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 11 232 37.275 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CHH28_RS17890 75d1958544efb1b405d8dbc338004918 286 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 12 281 4.2E-89 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CHH28_RS17890 75d1958544efb1b405d8dbc338004918 286 SUPERFAMILY SSF53790 10 230 1.83E-80 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CHH28_RS17890 75d1958544efb1b405d8dbc338004918 286 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 11 210 1.1E-32 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CHH28_RS17890 75d1958544efb1b405d8dbc338004918 286 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 89 100 - T 29-03-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CHH28_RS17890 75d1958544efb1b405d8dbc338004918 286 Gene3D G3DSA:3.40.1010.10 9 119 9.7E-41 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CHH28_RS17890 75d1958544efb1b405d8dbc338004918 286 PIRSF PIRSF005917 1 285 4.3E-103 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CHH28_RS17890 75d1958544efb1b405d8dbc338004918 286 Gene3D G3DSA:3.30.950.10 120 235 8.0E-41 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CHH28_RS10025 95250b4673955b9c96d0605fd526a284 276 SUPERFAMILY SSF56534 15 258 1.2E-92 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 CHH28_RS10025 95250b4673955b9c96d0605fd526a284 276 Gene3D G3DSA:1.10.800.10 11 263 2.6E-89 T 29-03-2018 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 CHH28_RS10025 95250b4673955b9c96d0605fd526a284 276 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 190 208 1.0E-8 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 CHH28_RS10025 95250b4673955b9c96d0605fd526a284 276 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 150 169 1.0E-8 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 CHH28_RS10025 95250b4673955b9c96d0605fd526a284 276 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 221 240 1.0E-8 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 CHH28_RS10025 95250b4673955b9c96d0605fd526a284 276 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 27 244 2.5E-46 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 CHH28_RS10025 95250b4673955b9c96d0605fd526a284 276 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 129 140 - T 29-03-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 CHH28_RS10025 95250b4673955b9c96d0605fd526a284 276 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 23 266 1.2E-91 T 29-03-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 CHH28_RS10275 75d826ecc0c4f8a470c7e99c76056cba 106 SUPERFAMILY SSF117782 1 105 4.71E-37 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 CHH28_RS10275 75d826ecc0c4f8a470c7e99c76056cba 106 Pfam PF01906 Putative heavy-metal-binding 1 103 2.1E-38 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 CHH28_RS10275 75d826ecc0c4f8a470c7e99c76056cba 106 Gene3D G3DSA:3.30.110.70 1 103 1.4E-36 T 29-03-2018 IPR035439 Uncharacterised protein family UPF0145/C2CD5 Reactome: R-HSA-1445148 CHH28_RS10275 75d826ecc0c4f8a470c7e99c76056cba 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 25.211 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 CHH28_RS03975 3b99844b28df99d0c946fe49024b547a 512 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 374 4.1E-70 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CHH28_RS03975 3b99844b28df99d0c946fe49024b547a 512 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 93 4.0E-15 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CHH28_RS03975 3b99844b28df99d0c946fe49024b547a 512 Gene3D G3DSA:1.20.150.20 383 509 7.2E-46 T 29-03-2018 CHH28_RS03975 3b99844b28df99d0c946fe49024b547a 512 Gene3D G3DSA:2.40.30.20 4 83 1.2E-32 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03975 3b99844b28df99d0c946fe49024b547a 512 SUPERFAMILY SSF50615 11 95 3.14E-28 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CHH28_RS03975 3b99844b28df99d0c946fe49024b547a 512 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 511 49.553 T 29-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03975 3b99844b28df99d0c946fe49024b547a 512 Gene3D G3DSA:3.40.50.300 84 374 1.5E-109 T 29-03-2018 CHH28_RS03975 3b99844b28df99d0c946fe49024b547a 512 SUPERFAMILY SSF47917 382 510 1.05E-44 T 29-03-2018 CHH28_RS03975 3b99844b28df99d0c946fe49024b547a 512 SUPERFAMILY SSF52540 97 380 3.44E-92 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS03975 3b99844b28df99d0c946fe49024b547a 512 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 511 1.8E-245 T 29-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03975 3b99844b28df99d0c946fe49024b547a 512 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 381 506 2.8E-44 T 29-03-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS10615 f5f35d48e22b8bee2147f8b957fe4792 132 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 113 3.0E-18 T 29-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CHH28_RS10615 f5f35d48e22b8bee2147f8b957fe4792 132 Gene3D G3DSA:3.90.1590.10 1 131 2.2E-35 T 29-03-2018 CHH28_RS10615 f5f35d48e22b8bee2147f8b957fe4792 132 SUPERFAMILY SSF51316 1 130 1.01E-43 T 29-03-2018 IPR011057 Mss4-like CHH28_RS10110 726e5ad6e2409a3a249906d89ffebadb 473 SUPERFAMILY SSF47384 231 313 1.51E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS10110 726e5ad6e2409a3a249906d89ffebadb 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 464 1.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS10110 726e5ad6e2409a3a249906d89ffebadb 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 1.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS10110 726e5ad6e2409a3a249906d89ffebadb 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 1.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS10110 726e5ad6e2409a3a249906d89ffebadb 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 423 1.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS10110 726e5ad6e2409a3a249906d89ffebadb 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 465 1.9E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS10110 726e5ad6e2409a3a249906d89ffebadb 473 SUPERFAMILY SSF158472 193 242 1.18E-5 T 29-03-2018 CHH28_RS10110 726e5ad6e2409a3a249906d89ffebadb 473 SMART SM00388 247 313 7.2E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS10110 726e5ad6e2409a3a249906d89ffebadb 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 254 313 2.1E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS10110 726e5ad6e2409a3a249906d89ffebadb 473 Gene3D G3DSA:1.10.287.130 237 308 1.2E-7 T 29-03-2018 CHH28_RS10110 726e5ad6e2409a3a249906d89ffebadb 473 Gene3D G3DSA:3.30.565.10 319 473 9.6E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS10110 726e5ad6e2409a3a249906d89ffebadb 473 SMART SM00304 193 246 6.3E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS10110 726e5ad6e2409a3a249906d89ffebadb 473 SMART SM00387 358 467 7.0E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS10110 726e5ad6e2409a3a249906d89ffebadb 473 SUPERFAMILY SSF55874 304 466 3.8E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS05065 f976310fe60cea4ff5fad2b8b0c2c47c 291 SUPERFAMILY SSF53850 89 287 2.35E-24 T 29-03-2018 CHH28_RS05065 f976310fe60cea4ff5fad2b8b0c2c47c 291 SUPERFAMILY SSF46785 1 107 5.44E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS05065 f976310fe60cea4ff5fad2b8b0c2c47c 291 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 288 1.3E-100 T 29-03-2018 IPR017685 HTH-type transcriptional regulator ArgP CHH28_RS05065 f976310fe60cea4ff5fad2b8b0c2c47c 291 Gene3D G3DSA:3.40.190.10 175 258 4.0E-16 T 29-03-2018 CHH28_RS05065 f976310fe60cea4ff5fad2b8b0c2c47c 291 Pfam PF03466 LysR substrate binding domain 87 283 1.1E-16 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS05065 f976310fe60cea4ff5fad2b8b0c2c47c 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.7E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS05065 f976310fe60cea4ff5fad2b8b0c2c47c 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.4E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS05065 f976310fe60cea4ff5fad2b8b0c2c47c 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.4E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS05065 f976310fe60cea4ff5fad2b8b0c2c47c 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.4E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS05065 f976310fe60cea4ff5fad2b8b0c2c47c 291 Gene3D G3DSA:3.40.190.10 90 174 2.3E-29 T 29-03-2018 CHH28_RS05065 f976310fe60cea4ff5fad2b8b0c2c47c 291 Gene3D G3DSA:1.10.10.10 1 89 3.8E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS14880 3e395253e487a0f2ed58cd6aa2175468 246 Gene3D G3DSA:3.40.50.720 2 246 7.0E-78 T 29-03-2018 CHH28_RS14880 3e395253e487a0f2ed58cd6aa2175468 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.5E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS14880 3e395253e487a0f2ed58cd6aa2175468 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.5E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS14880 3e395253e487a0f2ed58cd6aa2175468 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.5E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS14880 3e395253e487a0f2ed58cd6aa2175468 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.5E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS14880 3e395253e487a0f2ed58cd6aa2175468 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.5E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS14880 3e395253e487a0f2ed58cd6aa2175468 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.5E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS14880 3e395253e487a0f2ed58cd6aa2175468 246 SUPERFAMILY SSF51735 5 245 6.26E-85 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS14880 3e395253e487a0f2ed58cd6aa2175468 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.2E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS14880 3e395253e487a0f2ed58cd6aa2175468 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.2E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS14880 3e395253e487a0f2ed58cd6aa2175468 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.2E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS14880 3e395253e487a0f2ed58cd6aa2175468 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 7 243 4.3E-99 T 29-03-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CHH28_RS14880 3e395253e487a0f2ed58cd6aa2175468 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CHH28_RS14880 3e395253e487a0f2ed58cd6aa2175468 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 184 8.9E-6 T 29-03-2018 CHH28_RS14880 3e395253e487a0f2ed58cd6aa2175468 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 244 3.0E-67 T 29-03-2018 CHH28_RS17030 459b35a5734917916d4cd49008d91a5b 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 317 346 6.2E-26 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS17030 459b35a5734917916d4cd49008d91a5b 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 6.2E-26 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS17030 459b35a5734917916d4cd49008d91a5b 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 423 452 6.2E-26 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS17030 459b35a5734917916d4cd49008d91a5b 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 421 6.2E-26 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS17030 459b35a5734917916d4cd49008d91a5b 559 SUPERFAMILY SSF58104 249 558 1.44E-71 T 29-03-2018 CHH28_RS17030 459b35a5734917916d4cd49008d91a5b 559 Gene3D G3DSA:1.10.287.500 258 342 0.0067 T 29-03-2018 CHH28_RS17030 459b35a5734917916d4cd49008d91a5b 559 SMART SM00283 296 557 4.5E-76 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS17030 459b35a5734917916d4cd49008d91a5b 559 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 358 524 2.6E-40 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS17030 459b35a5734917916d4cd49008d91a5b 559 Gene3D G3DSA:1.10.287.950 343 559 5.6E-47 T 29-03-2018 CHH28_RS17030 459b35a5734917916d4cd49008d91a5b 559 SMART SM00304 227 281 7.0E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS17030 459b35a5734917916d4cd49008d91a5b 559 Gene3D G3DSA:1.20.120.570 17 208 0.0013 T 29-03-2018 CHH28_RS10825 bd636422557055f0aea056c330ae4e98 297 Gene3D G3DSA:1.10.10.60 134 249 5.0E-17 T 29-03-2018 CHH28_RS10825 bd636422557055f0aea056c330ae4e98 297 Gene3D G3DSA:1.10.10.60 250 297 1.4E-16 T 29-03-2018 CHH28_RS10825 bd636422557055f0aea056c330ae4e98 297 SUPERFAMILY SSF46689 199 245 1.48E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS10825 bd636422557055f0aea056c330ae4e98 297 Pfam PF12833 Helix-turn-helix domain 217 295 3.4E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS10825 bd636422557055f0aea056c330ae4e98 297 SMART SM00342 211 294 3.9E-34 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS10825 bd636422557055f0aea056c330ae4e98 297 SUPERFAMILY SSF46689 247 296 5.82E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS10825 bd636422557055f0aea056c330ae4e98 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 263 278 7.3E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS10825 bd636422557055f0aea056c330ae4e98 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 278 294 7.3E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS01185 961df19d6e890675576c3bfcf412129e 96 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 4 94 1.6E-29 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CHH28_RS01185 961df19d6e890675576c3bfcf412129e 96 SUPERFAMILY SSF55248 2 95 3.53E-31 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CHH28_RS01185 961df19d6e890675576c3bfcf412129e 96 Gene3D G3DSA:3.30.1360.20 3 96 3.6E-29 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CHH28_RS05670 23c2653494f3dd8b3f6224cf81aa0e5d 210 Gene3D G3DSA:3.40.50.2300 1 126 4.2E-38 T 29-03-2018 CHH28_RS05670 23c2653494f3dd8b3f6224cf81aa0e5d 210 Pfam PF00072 Response regulator receiver domain 4 115 1.9E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS05670 23c2653494f3dd8b3f6224cf81aa0e5d 210 Gene3D G3DSA:1.10.10.10 127 210 1.3E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS05670 23c2653494f3dd8b3f6224cf81aa0e5d 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 2.1E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS05670 23c2653494f3dd8b3f6224cf81aa0e5d 210 SUPERFAMILY SSF52172 3 171 1.27E-35 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS05670 23c2653494f3dd8b3f6224cf81aa0e5d 210 SMART SM00421 147 204 5.1E-20 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS05670 23c2653494f3dd8b3f6224cf81aa0e5d 210 SMART SM00448 2 115 9.5E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS05670 23c2653494f3dd8b3f6224cf81aa0e5d 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 2.8E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS05670 23c2653494f3dd8b3f6224cf81aa0e5d 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 2.8E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS05670 23c2653494f3dd8b3f6224cf81aa0e5d 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 2.8E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS05670 23c2653494f3dd8b3f6224cf81aa0e5d 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS12275 d163d20fc2d26da415841686829260c5 536 SUPERFAMILY SSF50465 330 431 5.28E-31 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CHH28_RS12275 d163d20fc2d26da415841686829260c5 536 SUPERFAMILY SSF50447 241 326 4.2E-24 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CHH28_RS12275 d163d20fc2d26da415841686829260c5 536 Gene3D G3DSA:2.40.30.10 329 432 3.4E-24 T 29-03-2018 CHH28_RS12275 d163d20fc2d26da415841686829260c5 536 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 430 7.7E-199 T 29-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CHH28_RS12275 d163d20fc2d26da415841686829260c5 536 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 476 52.771 T 29-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CHH28_RS12275 d163d20fc2d26da415841686829260c5 536 SUPERFAMILY SSF52540 16 232 1.13E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS12275 d163d20fc2d26da415841686829260c5 536 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 210 7.4E-13 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CHH28_RS12275 d163d20fc2d26da415841686829260c5 536 PRINTS PR00315 GTP-binding elongation factor signature 87 95 5.5E-12 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS12275 d163d20fc2d26da415841686829260c5 536 PRINTS PR00315 GTP-binding elongation factor signature 26 39 5.5E-12 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS12275 d163d20fc2d26da415841686829260c5 536 PRINTS PR00315 GTP-binding elongation factor signature 160 169 5.5E-12 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS12275 d163d20fc2d26da415841686829260c5 536 PRINTS PR00315 GTP-binding elongation factor signature 107 117 5.5E-12 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS12275 d163d20fc2d26da415841686829260c5 536 PRINTS PR00315 GTP-binding elongation factor signature 123 134 5.5E-12 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS12275 d163d20fc2d26da415841686829260c5 536 Gene3D G3DSA:2.40.30.10 237 328 2.5E-22 T 29-03-2018 CHH28_RS12275 d163d20fc2d26da415841686829260c5 536 Pfam PF00009 Elongation factor Tu GTP binding domain 23 223 1.2E-43 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS12275 d163d20fc2d26da415841686829260c5 536 Gene3D G3DSA:3.40.50.300 1 236 1.7E-44 T 29-03-2018 CHH28_RS12275 d163d20fc2d26da415841686829260c5 536 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 SUPERFAMILY SSF82693 141 182 1.07E-10 T 29-03-2018 CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 SUPERFAMILY SSF82693 269 325 1.07E-10 T 29-03-2018 CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 1.9E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.9E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 1.9E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 1.9E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 1.9E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 SUPERFAMILY SSF82714 727 798 1.31E-10 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 SUPERFAMILY SSF82866 801 1021 1.44E-43 T 29-03-2018 CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 Gene3D G3DSA:3.30.70.1430 568 665 1.0E-4 T 29-03-2018 CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 Gene3D G3DSA:3.30.2090.10 181 269 1.2E-14 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 Pfam PF00873 AcrB/AcrD/AcrF family 9 1021 3.9E-151 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 SUPERFAMILY SSF82866 292 489 5.75E-35 T 29-03-2018 CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 SUPERFAMILY SSF82693 46 136 1.26E-18 T 29-03-2018 CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 Gene3D G3DSA:3.30.2090.10 725 800 6.8E-11 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 Gene3D G3DSA:3.30.70.1430 45 145 2.3E-21 T 29-03-2018 CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 SUPERFAMILY SSF82714 183 267 6.02E-13 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 Gene3D G3DSA:1.20.1640.10 283 501 4.5E-33 T 29-03-2018 CHH28_RS14720 d5f45e27fb920efbc3dc446218f5dfcb 1051 Gene3D G3DSA:1.20.1640.10 801 1024 9.0E-40 T 29-03-2018 CHH28_RS18555 4091e05f0b258a8ce0f2030a3c9b4e1a 220 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 215 50.024 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CHH28_RS18555 4091e05f0b258a8ce0f2030a3c9b4e1a 220 Gene3D G3DSA:3.40.50.620 2 220 1.0E-47 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS18555 4091e05f0b258a8ce0f2030a3c9b4e1a 220 SUPERFAMILY SSF52402 3 217 2.43E-63 T 29-03-2018 CHH28_RS18555 4091e05f0b258a8ce0f2030a3c9b4e1a 220 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 202 6.8E-67 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CHH28_RS18555 4091e05f0b258a8ce0f2030a3c9b4e1a 220 Pfam PF06508 Queuosine biosynthesis protein QueC 4 209 5.6E-70 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CHH28_RS18555 4091e05f0b258a8ce0f2030a3c9b4e1a 220 PIRSF PIRSF006293 1 220 1.3E-78 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 Gene3D G3DSA:1.10.601.10 23 148 5.3E-12 T 29-03-2018 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 Gene3D G3DSA:1.10.601.10 149 476 1.1E-96 T 29-03-2018 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 403 639 1.4E-121 T 29-03-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 PRINTS PR00046 Major sigma-70 factor signature 600 615 7.8E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 PRINTS PR00046 Major sigma-70 factor signature 579 591 7.8E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 PRINTS PR00046 Major sigma-70 factor signature 455 463 7.8E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 PRINTS PR00046 Major sigma-70 factor signature 431 444 7.8E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 PRINTS PR00046 Major sigma-70 factor signature 615 626 7.8E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 Pfam PF04542 Sigma-70 region 2 407 476 1.8E-21 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 SUPERFAMILY SSF88659 537 639 1.31E-25 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 Gene3D G3DSA:1.10.10.10 569 640 5.7E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 Pfam PF03979 Sigma-70 factor, region 1.1 42 116 1.2E-25 T 29-03-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 Pfam PF04545 Sigma-70, region 4 575 628 1.1E-18 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 Pfam PF04539 Sigma-70 region 3 486 561 2.9E-31 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 600 626 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 Pfam PF00140 Sigma-70 factor, region 1.2 132 162 4.3E-12 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 403 628 1.8E-36 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 Gene3D G3DSA:1.10.10.10 477 527 2.0E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 Pfam PF04546 Sigma-70, non-essential region 173 376 5.3E-56 T 29-03-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 431 444 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 SUPERFAMILY SSF88946 149 474 1.02E-98 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 SUPERFAMILY SSF88659 480 553 5.23E-22 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS01430 c48216ddb12b383e4385e93899aa196d 641 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 42 640 44.147 T 29-03-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 Pfam PF00512 His Kinase A (phospho-acceptor) domain 491 555 3.8E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 Pfam PF00989 PAS fold 236 347 2.0E-14 T 29-03-2018 IPR013767 PAS fold GO:0006355 CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 SUPERFAMILY SSF47226 873 997 2.49E-23 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 SMART SM00086 310 350 0.1 T 29-03-2018 IPR001610 PAC motif CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 SMART SM00086 429 471 1.6E-5 T 29-03-2018 IPR001610 PAC motif CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 SUPERFAMILY SSF55785 244 358 7.57E-27 T 29-03-2018 IPR000014 PAS domain CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 Gene3D G3DSA:1.20.120.160 881 999 1.2E-18 T 29-03-2018 CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 SUPERFAMILY SSF55785 366 467 7.89E-26 T 29-03-2018 IPR000014 PAS domain CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 603 717 4.7E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 Gene3D G3DSA:3.40.50.2300 733 880 1.9E-39 T 29-03-2018 CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 Pfam PF01627 Hpt domain 909 994 3.2E-10 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 SMART SM00448 740 854 1.8E-34 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 Pfam PF13426 PAS domain 368 470 3.5E-15 T 29-03-2018 IPR000014 PAS domain CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 697 1.3E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 PRINTS PR00344 Bacterial sensor protein C-terminal signature 703 716 1.3E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 PRINTS PR00344 Bacterial sensor protein C-terminal signature 662 672 1.3E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 658 1.3E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 SUPERFAMILY SSF52172 739 859 7.54E-36 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 SMART SM00387 603 719 1.1E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 SUPERFAMILY SSF47384 476 557 2.75E-22 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 Gene3D G3DSA:3.30.565.10 560 728 6.1E-48 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 SMART SM00073 898 996 2.4E-4 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 SUPERFAMILY SSF55874 545 715 4.45E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 364 478 1.9E-19 T 29-03-2018 IPR000014 PAS domain CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 230 357 1.1E-28 T 29-03-2018 IPR000014 PAS domain CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 SMART SM00091 233 300 1.8E-10 T 29-03-2018 IPR000014 PAS domain CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 SMART SM00091 355 423 4.8E-6 T 29-03-2018 IPR000014 PAS domain CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 Gene3D G3DSA:1.10.287.130 495 552 1.1E-21 T 29-03-2018 CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 Gene3D G3DSA:3.30.450.20 214 367 2.3E-25 T 29-03-2018 CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 Pfam PF00072 Response regulator receiver domain 742 853 3.3E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 Gene3D G3DSA:3.30.450.20 368 494 1.1E-29 T 29-03-2018 CHH28_RS13695 bdc3020e7e42471226ec7b7588931457 1006 SMART SM00388 491 556 7.8E-24 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS04335 49c8fe09ccc0f0c69c905ddde0007ee9 382 Gene3D G3DSA:1.10.3290.10 22 305 1.1E-48 T 29-03-2018 IPR003812 Fido domain CHH28_RS04335 49c8fe09ccc0f0c69c905ddde0007ee9 382 Pfam PF02661 Fic/DOC family 113 227 1.4E-19 T 29-03-2018 IPR003812 Fido domain CHH28_RS04335 49c8fe09ccc0f0c69c905ddde0007ee9 382 SUPERFAMILY SSF140931 101 305 1.24E-33 T 29-03-2018 IPR003812 Fido domain CHH28_RS04335 49c8fe09ccc0f0c69c905ddde0007ee9 382 Pfam PF13776 Domain of unknown function (DUF4172) 3 84 1.8E-24 T 29-03-2018 IPR025230 Domain of unknown function DUF4172 CHH28_RS04335 49c8fe09ccc0f0c69c905ddde0007ee9 382 Gene3D G3DSA:1.10.10.10 306 382 1.9E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS05895 e7abafe5e559565a7af129ceed132528 611 Pfam PF00920 Dehydratase family 34 603 2.3E-217 T 29-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CHH28_RS05895 e7abafe5e559565a7af129ceed132528 611 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 606 1.4E-251 T 29-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CHH28_RS05895 e7abafe5e559565a7af129ceed132528 611 Gene3D G3DSA:3.40.50.2300 89 243 4.5E-5 T 29-03-2018 CHH28_RS05895 e7abafe5e559565a7af129ceed132528 611 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CHH28_RS05895 e7abafe5e559565a7af129ceed132528 611 SUPERFAMILY SSF143975 4 418 1.57E-133 T 29-03-2018 CHH28_RS05895 e7abafe5e559565a7af129ceed132528 611 SUPERFAMILY SSF52016 419 607 6.51E-60 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CHH28_RS05895 e7abafe5e559565a7af129ceed132528 611 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 606 44.29 T 29-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CHH28_RS05895 e7abafe5e559565a7af129ceed132528 611 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CHH28_RS14440 907b0588d54c16183a6efb2b942abd85 308 Gene3D G3DSA:3.40.710.10 1 306 3.0E-118 T 29-03-2018 CHH28_RS14440 907b0588d54c16183a6efb2b942abd85 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 7 304 1.6E-122 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CHH28_RS14440 907b0588d54c16183a6efb2b942abd85 308 Hamap MF_00313 Glutaminase [glsA]. 3 304 44.382 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CHH28_RS14440 907b0588d54c16183a6efb2b942abd85 308 Pfam PF04960 Glutaminase 21 304 4.4E-109 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CHH28_RS14440 907b0588d54c16183a6efb2b942abd85 308 SUPERFAMILY SSF56601 3 305 1.18E-106 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS02285 001458f0754912f9e0c925f41396e154 200 Gene3D G3DSA:1.20.1050.10 90 182 2.2E-11 T 29-03-2018 CHH28_RS02285 001458f0754912f9e0c925f41396e154 200 SUPERFAMILY SSF47616 77 189 7.67E-10 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CHH28_RS02285 001458f0754912f9e0c925f41396e154 200 SUPERFAMILY SSF52833 1 87 2.24E-14 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS02285 001458f0754912f9e0c925f41396e154 200 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 77 1.3E-13 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CHH28_RS02285 001458f0754912f9e0c925f41396e154 200 Gene3D G3DSA:3.40.30.10 1 89 1.4E-18 T 29-03-2018 CHH28_RS12880 25e2dd7082b43c38be6b36443895ac7a 239 Gene3D G3DSA:3.40.50.2300 1 136 1.4E-30 T 29-03-2018 CHH28_RS12880 25e2dd7082b43c38be6b36443895ac7a 239 Pfam PF00072 Response regulator receiver domain 14 122 3.1E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS12880 25e2dd7082b43c38be6b36443895ac7a 239 SMART SM00862 160 236 2.9E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS12880 25e2dd7082b43c38be6b36443895ac7a 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 236 7.3E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS12880 25e2dd7082b43c38be6b36443895ac7a 239 SUPERFAMILY SSF52172 12 180 7.62E-35 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS12880 25e2dd7082b43c38be6b36443895ac7a 239 Gene3D G3DSA:1.10.10.10 137 239 1.9E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS12880 25e2dd7082b43c38be6b36443895ac7a 239 SMART SM00448 12 122 8.4E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS17975 de17f2ff4da201d6c165b05458e06024 625 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 430 591 1.1E-39 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS17975 de17f2ff4da201d6c165b05458e06024 625 SMART SM00304 383 450 23.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS17975 de17f2ff4da201d6c165b05458e06024 625 SMART SM00304 295 348 3.7E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS17975 de17f2ff4da201d6c165b05458e06024 625 SMART SM01358 33 273 2.9E-23 T 29-03-2018 IPR032255 Helical bimodular sensor domain CHH28_RS17975 de17f2ff4da201d6c165b05458e06024 625 SMART SM00283 363 624 3.0E-68 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS17975 de17f2ff4da201d6c165b05458e06024 625 Gene3D G3DSA:1.10.287.950 397 625 1.3E-51 T 29-03-2018 CHH28_RS17975 de17f2ff4da201d6c165b05458e06024 625 Gene3D G3DSA:1.10.287.950 176 396 3.9E-9 T 29-03-2018 CHH28_RS17975 de17f2ff4da201d6c165b05458e06024 625 SUPERFAMILY SSF58104 316 625 2.62E-73 T 29-03-2018 CHH28_RS17975 de17f2ff4da201d6c165b05458e06024 625 Pfam PF00672 HAMP domain 295 345 2.1E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS12930 023c01d056a4b68f6d41080d9115d053 387 Gene3D G3DSA:1.20.1090.10 183 387 2.0E-40 T 29-03-2018 CHH28_RS12930 023c01d056a4b68f6d41080d9115d053 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 360 3.6E-89 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CHH28_RS12930 023c01d056a4b68f6d41080d9115d053 387 Gene3D G3DSA:3.40.50.1970 1 182 5.8E-39 T 29-03-2018 CHH28_RS12930 023c01d056a4b68f6d41080d9115d053 387 SUPERFAMILY SSF56796 1 365 1.57E-104 T 29-03-2018 CHH28_RS12930 023c01d056a4b68f6d41080d9115d053 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CHH28_RS12930 023c01d056a4b68f6d41080d9115d053 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 262 282 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CHH28_RS08970 f0542a87cbee4194c221b6896b5c28f5 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 4.5E-12 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS08970 f0542a87cbee4194c221b6896b5c28f5 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 4.5E-12 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS08970 f0542a87cbee4194c221b6896b5c28f5 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 4.5E-12 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS08970 f0542a87cbee4194c221b6896b5c28f5 166 Pfam PF01037 Lrp/AsnC ligand binding domain 75 147 1.2E-23 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CHH28_RS08970 f0542a87cbee4194c221b6896b5c28f5 166 ProSitePatterns PS00519 AsnC-type HTH domain signature. 27 53 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CHH28_RS08970 f0542a87cbee4194c221b6896b5c28f5 166 Gene3D G3DSA:3.30.70.920 62 155 2.9E-28 T 29-03-2018 CHH28_RS08970 f0542a87cbee4194c221b6896b5c28f5 166 SUPERFAMILY SSF46785 9 99 5.83E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS08970 f0542a87cbee4194c221b6896b5c28f5 166 SMART SM00344 11 118 2.3E-41 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CHH28_RS08970 f0542a87cbee4194c221b6896b5c28f5 166 Gene3D G3DSA:1.10.10.10 11 61 6.9E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS08970 f0542a87cbee4194c221b6896b5c28f5 166 SUPERFAMILY SSF54909 69 158 4.96E-22 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CHH28_RS08970 f0542a87cbee4194c221b6896b5c28f5 166 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 56 1.7E-18 T 29-03-2018 CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 Pfam PF08448 PAS fold 311 420 2.5E-13 T 29-03-2018 IPR013656 PAS fold-4 CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 SUPERFAMILY SSF55785 197 293 1.13E-8 T 29-03-2018 IPR000014 PAS domain CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 SUPERFAMILY SSF52172 698 815 1.24E-36 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 SUPERFAMILY SSF55874 501 677 2.88E-46 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 SUPERFAMILY SSF55785 290 418 2.65E-19 T 29-03-2018 IPR000014 PAS domain CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 Pfam PF13426 PAS domain 196 291 9.5E-4 T 29-03-2018 IPR000014 PAS domain CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 Pfam PF00072 Response regulator receiver domain 699 811 5.9E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 Gene3D G3DSA:3.40.50.2300 694 821 5.4E-40 T 29-03-2018 CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 Pfam PF00512 His Kinase A (phospho-acceptor) domain 447 512 2.8E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 Gene3D G3DSA:1.10.287.130 444 508 5.2E-21 T 29-03-2018 CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 SMART SM00091 185 247 1.7 T 29-03-2018 IPR000014 PAS domain CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 SMART SM00091 305 371 5.2E-8 T 29-03-2018 IPR000014 PAS domain CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 304 427 7.3E-8 T 29-03-2018 IPR000014 PAS domain CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 Gene3D G3DSA:3.30.565.10 516 682 3.2E-49 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 SUPERFAMILY SSF47384 434 513 1.96E-22 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 SMART SM00448 697 811 3.9E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 SMART SM00387 559 675 7.5E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 SMART SM00388 447 512 3.4E-25 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 559 674 1.2E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 Gene3D G3DSA:3.30.450.20 184 295 3.0E-13 T 29-03-2018 CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 PRINTS PR00344 Bacterial sensor protein C-terminal signature 659 672 2.0E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 653 2.0E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 628 2.0E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 614 2.0E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS03450 4591c48018d64ae6d4d829a087d78ee0 822 Gene3D G3DSA:3.30.450.20 296 443 1.8E-24 T 29-03-2018 CHH28_RS10705 8d06da910a8354d196a2f7e5893a876e 577 SMART SM00382 321 489 5.8E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS10705 8d06da910a8354d196a2f7e5893a876e 577 SMART SM00382 28 199 1.9E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS10705 8d06da910a8354d196a2f7e5893a876e 577 SUPERFAMILY SSF52540 307 499 1.58E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS10705 8d06da910a8354d196a2f7e5893a876e 577 SUPERFAMILY SSF52540 4 204 1.52E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS10705 8d06da910a8354d196a2f7e5893a876e 577 Pfam PF12848 ABC transporter 195 270 2.9E-6 T 29-03-2018 IPR032781 ABC-transporter extension domain CHH28_RS10705 8d06da910a8354d196a2f7e5893a876e 577 Gene3D G3DSA:3.40.50.300 4 279 1.6E-42 T 29-03-2018 CHH28_RS10705 8d06da910a8354d196a2f7e5893a876e 577 Gene3D G3DSA:3.40.50.300 285 577 4.4E-34 T 29-03-2018 CHH28_RS10705 8d06da910a8354d196a2f7e5893a876e 577 Pfam PF00005 ABC transporter 318 444 7.9E-14 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS10705 8d06da910a8354d196a2f7e5893a876e 577 Pfam PF00005 ABC transporter 21 152 3.6E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS10705 8d06da910a8354d196a2f7e5893a876e 577 ProSitePatterns PS00211 ABC transporters family signature. 125 139 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS02120 2ff3d55b74a2a16dff6d6868e0ef04e4 411 Pfam PF07690 Major Facilitator Superfamily 17 358 5.8E-26 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CHH28_RS02120 2ff3d55b74a2a16dff6d6868e0ef04e4 411 SUPERFAMILY SSF103473 5 401 1.2E-41 T 29-03-2018 IPR020846 Major facilitator superfamily domain CHH28_RS02120 2ff3d55b74a2a16dff6d6868e0ef04e4 411 Gene3D G3DSA:1.20.1250.20 2 204 2.4E-18 T 29-03-2018 CHH28_RS02120 2ff3d55b74a2a16dff6d6868e0ef04e4 411 Gene3D G3DSA:1.20.1250.20 209 405 5.0E-18 T 29-03-2018 CHH28_RS04835 0bedf59afd3b979d7bd3e4148ab90158 299 SUPERFAMILY SSF46785 4 108 2.52E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04835 0bedf59afd3b979d7bd3e4148ab90158 299 Pfam PF03466 LysR substrate binding domain 91 291 8.0E-32 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS04835 0bedf59afd3b979d7bd3e4148ab90158 299 SUPERFAMILY SSF53850 92 292 5.28E-37 T 29-03-2018 CHH28_RS04835 0bedf59afd3b979d7bd3e4148ab90158 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.6E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS04835 0bedf59afd3b979d7bd3e4148ab90158 299 Gene3D G3DSA:1.10.10.10 1 86 1.5E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04835 0bedf59afd3b979d7bd3e4148ab90158 299 Gene3D G3DSA:3.40.190.10 179 258 1.9E-7 T 29-03-2018 CHH28_RS04835 0bedf59afd3b979d7bd3e4148ab90158 299 Gene3D G3DSA:3.40.190.10 88 178 2.5E-13 T 29-03-2018 CHH28_RS04635 bc4013fec6424b276519d39759bdd4bd 304 Gene3D G3DSA:2.40.160.10 28 304 5.9E-41 T 29-03-2018 CHH28_RS04635 bc4013fec6424b276519d39759bdd4bd 304 SUPERFAMILY SSF56935 29 304 2.72E-47 T 29-03-2018 CHH28_RS04635 bc4013fec6424b276519d39759bdd4bd 304 Pfam PF13609 Gram-negative porin 8 288 1.4E-37 T 29-03-2018 CHH28_RS04635 bc4013fec6424b276519d39759bdd4bd 304 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 263 280 2.7E-7 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CHH28_RS04635 bc4013fec6424b276519d39759bdd4bd 304 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 50 61 2.7E-7 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CHH28_RS04635 bc4013fec6424b276519d39759bdd4bd 304 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 90 100 2.7E-7 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CHH28_RS04635 bc4013fec6424b276519d39759bdd4bd 304 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 145 156 2.7E-7 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CHH28_RS04635 bc4013fec6424b276519d39759bdd4bd 304 PRINTS PR00184 Neisseria sp. porin signature 52 77 1.9E-7 T 29-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 CHH28_RS04635 bc4013fec6424b276519d39759bdd4bd 304 PRINTS PR00184 Neisseria sp. porin signature 88 107 1.9E-7 T 29-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 CHH28_RS04635 bc4013fec6424b276519d39759bdd4bd 304 PRINTS PR00184 Neisseria sp. porin signature 144 161 1.9E-7 T 29-03-2018 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 CHH28_RS16570 994136328b408028722a1472920aa114 436 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 140 415 6.3E-84 T 29-03-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 CHH28_RS16570 994136328b408028722a1472920aa114 436 Pfam PF01458 Uncharacterized protein family (UPF0051) 176 400 7.0E-73 T 29-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 CHH28_RS16570 994136328b408028722a1472920aa114 436 SUPERFAMILY SSF101960 12 425 3.53E-106 T 29-03-2018 CHH28_RS04440 1ff1a993b5d0089ba4faa2a7e7756d85 300 Gene3D G3DSA:1.10.10.60 75 135 3.8E-9 T 29-03-2018 CHH28_RS04440 1ff1a993b5d0089ba4faa2a7e7756d85 300 Gene3D G3DSA:3.20.80.10 142 300 8.7E-13 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain CHH28_RS04440 1ff1a993b5d0089ba4faa2a7e7756d85 300 SUPERFAMILY SSF46689 22 70 1.84E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS04440 1ff1a993b5d0089ba4faa2a7e7756d85 300 Gene3D G3DSA:1.10.10.60 12 74 8.5E-10 T 29-03-2018 CHH28_RS04440 1ff1a993b5d0089ba4faa2a7e7756d85 300 Pfam PF12833 Helix-turn-helix domain 42 119 2.9E-14 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS04440 1ff1a993b5d0089ba4faa2a7e7756d85 300 Pfam PF06445 GyrI-like small molecule binding domain 147 268 4.4E-8 T 29-03-2018 IPR029442 GyrI-like small molecule binding domain CHH28_RS04440 1ff1a993b5d0089ba4faa2a7e7756d85 300 SUPERFAMILY SSF46689 72 121 3.09E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS04440 1ff1a993b5d0089ba4faa2a7e7756d85 300 SMART SM00342 36 118 6.5E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS04440 1ff1a993b5d0089ba4faa2a7e7756d85 300 SUPERFAMILY SSF55136 208 269 1.02E-6 T 29-03-2018 CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 Pfam PF00873 AcrB/AcrD/AcrF family 6 1040 3.3E-269 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 Gene3D G3DSA:3.30.70.1430 580 680 1.4E-13 T 29-03-2018 CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 Gene3D G3DSA:3.30.2090.10 185 276 8.2E-14 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 SUPERFAMILY SSF82693 142 186 1.44E-14 T 29-03-2018 CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 SUPERFAMILY SSF82693 285 342 1.44E-14 T 29-03-2018 CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 PRINTS PR00702 Acriflavin resistance protein family signature 565 582 3.0E-21 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 PRINTS PR00702 Acriflavin resistance protein family signature 348 371 3.0E-21 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.0E-21 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 PRINTS PR00702 Acriflavin resistance protein family signature 403 427 3.0E-21 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 PRINTS PR00702 Acriflavin resistance protein family signature 375 396 3.0E-21 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 Gene3D G3DSA:1.20.1640.10 300 530 1.9E-46 T 29-03-2018 CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1045 0.0 T 29-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 SUPERFAMILY SSF82693 580 679 3.92E-8 T 29-03-2018 CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 SUPERFAMILY SSF82866 820 1043 3.01E-55 T 29-03-2018 CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 Gene3D G3DSA:3.30.2090.10 736 823 1.4E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 SUPERFAMILY SSF82714 737 821 1.15E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 SUPERFAMILY SSF82714 187 273 1.57E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 Gene3D G3DSA:3.30.70.1430 42 136 2.4E-21 T 29-03-2018 CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 Gene3D G3DSA:1.20.1640.10 827 1043 9.3E-43 T 29-03-2018 CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 SUPERFAMILY SSF82693 43 130 8.89E-21 T 29-03-2018 CHH28_RS13090 5835170e227c0bb371df0c6dd2da7242 1047 SUPERFAMILY SSF82866 308 519 7.98E-44 T 29-03-2018 CHH28_RS03130 615383d35f60e9723ec681f62e29a502 143 SUPERFAMILY SSF53850 18 136 1.38E-12 T 29-03-2018 CHH28_RS03130 615383d35f60e9723ec681f62e29a502 143 Gene3D G3DSA:3.40.190.10 22 141 5.2E-12 T 29-03-2018 CHH28_RS01650 428aa55b7470953394771ca634175c78 476 Gene3D G3DSA:3.50.50.60 319 395 5.3E-18 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS01650 428aa55b7470953394771ca634175c78 476 Gene3D G3DSA:3.50.50.60 245 318 8.6E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS01650 428aa55b7470953394771ca634175c78 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 154 463 1.5E-27 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS01650 428aa55b7470953394771ca634175c78 476 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 31 141 9.2E-38 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CHH28_RS01650 428aa55b7470953394771ca634175c78 476 SUPERFAMILY SSF51971 152 405 1.71E-69 T 29-03-2018 CHH28_RS01650 428aa55b7470953394771ca634175c78 476 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 13 475 4.3E-238 T 29-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 CHH28_RS01650 428aa55b7470953394771ca634175c78 476 Gene3D G3DSA:3.40.50.720 151 244 4.5E-15 T 29-03-2018 CHH28_RS01650 428aa55b7470953394771ca634175c78 476 SUPERFAMILY SSF46548 12 164 2.67E-39 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CHH28_RS01650 428aa55b7470953394771ca634175c78 476 Gene3D G3DSA:1.10.1060.10 3 150 4.5E-40 T 29-03-2018 CHH28_RS01650 428aa55b7470953394771ca634175c78 476 Gene3D G3DSA:3.40.50.720 396 475 1.8E-6 T 29-03-2018 CHH28_RS01650 428aa55b7470953394771ca634175c78 476 PRINTS PR00419 Adrenodoxin reductase family signature 178 191 5.2E-34 T 29-03-2018 CHH28_RS01650 428aa55b7470953394771ca634175c78 476 PRINTS PR00419 Adrenodoxin reductase family signature 220 230 5.2E-34 T 29-03-2018 CHH28_RS01650 428aa55b7470953394771ca634175c78 476 PRINTS PR00419 Adrenodoxin reductase family signature 330 343 5.2E-34 T 29-03-2018 CHH28_RS01650 428aa55b7470953394771ca634175c78 476 PRINTS PR00419 Adrenodoxin reductase family signature 155 177 5.2E-34 T 29-03-2018 CHH28_RS01650 428aa55b7470953394771ca634175c78 476 PRINTS PR00419 Adrenodoxin reductase family signature 296 310 5.2E-34 T 29-03-2018 CHH28_RS15800 e13f798b6207d30c872864474769b9a0 149 Gene3D G3DSA:1.10.1660.10 67 144 8.1E-13 T 29-03-2018 CHH28_RS15800 e13f798b6207d30c872864474769b9a0 149 SUPERFAMILY SSF46955 12 134 3.44E-30 T 29-03-2018 IPR009061 Putative DNA-binding domain CHH28_RS15800 e13f798b6207d30c872864474769b9a0 149 SMART SM00422 12 80 1.8E-24 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS15800 e13f798b6207d30c872864474769b9a0 149 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 12 144 8.5E-59 T 29-03-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 CHH28_RS15800 e13f798b6207d30c872864474769b9a0 149 Pfam PF00376 MerR family regulatory protein 13 49 4.8E-14 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS15800 e13f798b6207d30c872864474769b9a0 149 Gene3D G3DSA:1.10.1660.10 8 66 6.5E-20 T 29-03-2018 CHH28_RS15800 e13f798b6207d30c872864474769b9a0 149 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 2.8E-10 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS15800 e13f798b6207d30c872864474769b9a0 149 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 2.8E-10 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS15800 e13f798b6207d30c872864474769b9a0 149 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 2.8E-10 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS15800 e13f798b6207d30c872864474769b9a0 149 Pfam PF09278 MerR, DNA binding 54 119 1.4E-15 T 29-03-2018 IPR015358 Transcription regulator MerR, DNA binding CHH28_RS08680 a6dd9b18aa4d8794c13e2186af7fe193 78 PIRSF PIRSF003113 1 78 1.6E-15 T 29-03-2018 IPR002634 BolA protein CHH28_RS08680 a6dd9b18aa4d8794c13e2186af7fe193 78 SUPERFAMILY SSF82657 2 76 7.32E-21 T 29-03-2018 IPR002634 BolA protein CHH28_RS08680 a6dd9b18aa4d8794c13e2186af7fe193 78 Gene3D G3DSA:3.30.300.90 1 78 3.5E-17 T 29-03-2018 CHH28_RS08680 a6dd9b18aa4d8794c13e2186af7fe193 78 Pfam PF01722 BolA-like protein 22 74 6.6E-11 T 29-03-2018 IPR002634 BolA protein CHH28_RS00340 00be9e47ae03da8624243e8a33b854d4 86 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 11 85 3.5E-12 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CHH28_RS00340 00be9e47ae03da8624243e8a33b854d4 86 Pfam PF04999 Cell division protein FtsL 9 83 1.9E-15 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CHH28_RS06185 68eeaf14aeee447da706c87854969010 126 SUPERFAMILY SSF52821 9 118 7.2E-29 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS06185 68eeaf14aeee447da706c87854969010 126 Pfam PF00581 Rhodanese-like domain 24 112 1.7E-17 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS06185 68eeaf14aeee447da706c87854969010 126 Gene3D G3DSA:3.40.250.10 1 123 5.7E-26 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS06185 68eeaf14aeee447da706c87854969010 126 SMART SM00450 19 117 2.9E-21 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS01365 2aaaeab10fc736be3bba32b0de29996f 640 SUPERFAMILY SSF52540 75 345 1.49E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS01365 2aaaeab10fc736be3bba32b0de29996f 640 PIRSF PIRSF000549 1 640 1.2E-290 T 29-03-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 CHH28_RS01365 2aaaeab10fc736be3bba32b0de29996f 640 SMART SM00763 19 376 1.1E-213 T 29-03-2018 IPR013153 PrkA AAA domain CHH28_RS01365 2aaaeab10fc736be3bba32b0de29996f 640 Gene3D G3DSA:3.40.50.300 53 362 1.0E-10 T 29-03-2018 CHH28_RS01365 2aaaeab10fc736be3bba32b0de29996f 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 3.1E-76 T 29-03-2018 IPR010650 PrkA C-terminal domain CHH28_RS01365 2aaaeab10fc736be3bba32b0de29996f 640 Pfam PF08298 PrkA AAA domain 19 376 3.5E-178 T 29-03-2018 IPR013153 PrkA AAA domain CHH28_RS02845 79c063a30aeeb4f25274dba8a98528b5 333 SMART SM00342 245 327 1.5E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS02845 79c063a30aeeb4f25274dba8a98528b5 333 Gene3D G3DSA:1.10.10.60 221 272 2.3E-4 T 29-03-2018 CHH28_RS02845 79c063a30aeeb4f25274dba8a98528b5 333 SUPERFAMILY SSF46689 281 331 2.91E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS02845 79c063a30aeeb4f25274dba8a98528b5 333 Pfam PF12833 Helix-turn-helix domain 252 329 2.1E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS02845 79c063a30aeeb4f25274dba8a98528b5 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 25 201 4.1E-22 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS02845 79c063a30aeeb4f25274dba8a98528b5 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 311 327 2.5E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS02845 79c063a30aeeb4f25274dba8a98528b5 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 296 311 2.5E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS02845 79c063a30aeeb4f25274dba8a98528b5 333 Gene3D G3DSA:1.10.10.60 283 331 1.7E-14 T 29-03-2018 CHH28_RS12545 5dec4a18f0c3867612d41fba59f9697a 350 Gene3D G3DSA:3.40.50.300 4 295 6.4E-67 T 29-03-2018 CHH28_RS12545 5dec4a18f0c3867612d41fba59f9697a 350 Pfam PF00005 ABC transporter 23 167 8.2E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS12545 5dec4a18f0c3867612d41fba59f9697a 350 SUPERFAMILY SSF52540 8 249 9.58E-78 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS12545 5dec4a18f0c3867612d41fba59f9697a 350 Pfam PF08402 TOBE domain 279 348 2.0E-10 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CHH28_RS12545 5dec4a18f0c3867612d41fba59f9697a 350 SUPERFAMILY SSF50331 246 349 6.12E-13 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CHH28_RS12545 5dec4a18f0c3867612d41fba59f9697a 350 SMART SM00382 32 217 1.1E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS12545 5dec4a18f0c3867612d41fba59f9697a 350 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS19115 87552c7da4f5526f48e3b24b492b339f 828 Pfam PF07627 Protein of unknown function (DUF1588) 382 469 3.2E-6 T 29-03-2018 IPR013039 Domain of unknown function DUF1588 CHH28_RS19115 87552c7da4f5526f48e3b24b492b339f 828 Gene3D G3DSA:3.40.190.10 1 581 0.0015 T 29-03-2018 CHH28_RS16995 0bd398255745f07ab17ca2035f54f766 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 53 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CHH28_RS16995 0bd398255745f07ab17ca2035f54f766 210 SUPERFAMILY SSF46689 4 73 8.21E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS16995 0bd398255745f07ab17ca2035f54f766 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 5.1E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS16995 0bd398255745f07ab17ca2035f54f766 210 Gene3D G3DSA:1.10.357.10 50 210 6.6E-34 T 29-03-2018 CHH28_RS16995 0bd398255745f07ab17ca2035f54f766 210 Gene3D G3DSA:1.10.10.60 2 49 6.7E-16 T 29-03-2018 CHH28_RS16995 0bd398255745f07ab17ca2035f54f766 210 SUPERFAMILY SSF48498 83 209 1.18E-35 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CHH28_RS16995 0bd398255745f07ab17ca2035f54f766 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 5.6E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS16995 0bd398255745f07ab17ca2035f54f766 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 5.6E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS09490 c8d567f6eff11ee1810ea283a8ea4728 62 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 3.1E-21 T 29-03-2018 IPR019201 Protein of unknown function DUF2065 CHH28_RS03570 bc14a96f96ed734b8fa3d4216a0c7c3f 130 Pfam PF03061 Thioesterase superfamily 38 105 2.8E-4 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CHH28_RS03570 bc14a96f96ed734b8fa3d4216a0c7c3f 130 SUPERFAMILY SSF54637 3 128 4.13E-33 T 29-03-2018 IPR029069 HotDog domain CHH28_RS03570 bc14a96f96ed734b8fa3d4216a0c7c3f 130 PIRSF PIRSF014972 1 130 4.5E-37 T 29-03-2018 IPR025540 Fluoroacetyl-CoA thioesterase CHH28_RS03570 bc14a96f96ed734b8fa3d4216a0c7c3f 130 Gene3D G3DSA:3.10.129.10 1 130 2.4E-18 T 29-03-2018 CHH28_RS12560 43f2b463402e7c2bcbebf19f861d6662 204 SMART SM00278 108 127 0.033 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CHH28_RS12560 43f2b463402e7c2bcbebf19f861d6662 204 SMART SM00278 73 92 0.3 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CHH28_RS12560 43f2b463402e7c2bcbebf19f861d6662 204 Gene3D G3DSA:1.10.8.10 154 199 6.7E-14 T 29-03-2018 CHH28_RS12560 43f2b463402e7c2bcbebf19f861d6662 204 Pfam PF01330 RuvA N terminal domain 1 62 5.4E-21 T 29-03-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CHH28_RS12560 43f2b463402e7c2bcbebf19f861d6662 204 SUPERFAMILY SSF50249 1 63 8.0E-17 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS12560 43f2b463402e7c2bcbebf19f861d6662 204 SUPERFAMILY SSF47781 66 136 3.22E-22 T 29-03-2018 IPR010994 RuvA domain 2-like CHH28_RS12560 43f2b463402e7c2bcbebf19f861d6662 204 Gene3D G3DSA:1.10.150.20 82 139 1.4E-15 T 29-03-2018 CHH28_RS12560 43f2b463402e7c2bcbebf19f861d6662 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 8.1E-18 T 29-03-2018 CHH28_RS12560 43f2b463402e7c2bcbebf19f861d6662 204 Gene3D G3DSA:2.40.50.140 1 55 9.9E-25 T 29-03-2018 CHH28_RS12560 43f2b463402e7c2bcbebf19f861d6662 204 Gene3D G3DSA:1.10.340.30 56 81 0.043 T 29-03-2018 CHH28_RS12560 43f2b463402e7c2bcbebf19f861d6662 204 Pfam PF07499 RuvA, C-terminal domain 156 197 2.5E-14 T 29-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CHH28_RS12560 43f2b463402e7c2bcbebf19f861d6662 204 SUPERFAMILY SSF46929 154 198 1.83E-10 T 29-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CHH28_RS12560 43f2b463402e7c2bcbebf19f861d6662 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 200 30.907 T 29-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CHH28_RS12560 43f2b463402e7c2bcbebf19f861d6662 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 200 3.7E-60 T 29-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CHH28_RS19580 c6ade826585e8095d49fb1e41f0e19aa 451 Pfam PF04575 Protein of unknown function (DUF560) 161 440 7.5E-10 T 29-03-2018 IPR007655 Protein of unknown function DUF560 CHH28_RS19580 c6ade826585e8095d49fb1e41f0e19aa 451 Gene3D G3DSA:2.40.160.20 161 451 0.018 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS19580 c6ade826585e8095d49fb1e41f0e19aa 451 Gene3D G3DSA:1.25.40.10 23 160 7.6E-15 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS19580 c6ade826585e8095d49fb1e41f0e19aa 451 SUPERFAMILY SSF48452 295 384 7.59E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS19580 c6ade826585e8095d49fb1e41f0e19aa 451 SUPERFAMILY SSF48452 46 137 7.59E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS19580 c6ade826585e8095d49fb1e41f0e19aa 451 Pfam PF14559 Tetratricopeptide repeat 82 140 9.8E-6 T 29-03-2018 CHH28_RS07825 292a36f202fc426b61ef8f9c85e2d2f5 601 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 470 594 1.4E-37 T 29-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CHH28_RS07825 292a36f202fc426b61ef8f9c85e2d2f5 601 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 165 273 1.3E-17 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CHH28_RS07825 292a36f202fc426b61ef8f9c85e2d2f5 601 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 453 6.7E-22 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS07825 292a36f202fc426b61ef8f9c85e2d2f5 601 Gene3D G3DSA:1.10.540.10 7 162 1.2E-19 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS07825 292a36f202fc426b61ef8f9c85e2d2f5 601 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 41 160 1.5E-12 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS07825 292a36f202fc426b61ef8f9c85e2d2f5 601 SUPERFAMILY SSF56645 36 281 5.1E-58 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CHH28_RS07825 292a36f202fc426b61ef8f9c85e2d2f5 601 SUPERFAMILY SSF47203 289 477 8.54E-47 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS07825 292a36f202fc426b61ef8f9c85e2d2f5 601 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 34 7.4E-10 T 29-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CHH28_RS07825 292a36f202fc426b61ef8f9c85e2d2f5 601 Gene3D G3DSA:2.40.110.10 163 277 1.5E-23 T 29-03-2018 CHH28_RS07825 292a36f202fc426b61ef8f9c85e2d2f5 601 Gene3D G3DSA:1.20.140.10 298 468 8.2E-42 T 29-03-2018 CHH28_RS09835 da4e21387721f762aa1350b3a851d425 230 SMART SM00479 40 220 1.7E-23 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CHH28_RS09835 da4e21387721f762aa1350b3a851d425 230 Gene3D G3DSA:3.30.420.10 33 223 8.8E-32 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS09835 da4e21387721f762aa1350b3a851d425 230 Pfam PF00929 Exonuclease 42 211 4.8E-17 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CHH28_RS09835 da4e21387721f762aa1350b3a851d425 230 SUPERFAMILY SSF53098 37 218 3.32E-40 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS05010 96b602c4dd69dd4f1811fec20e1ac46f 230 SMART SM00855 3 173 2.2E-4 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CHH28_RS05010 96b602c4dd69dd4f1811fec20e1ac46f 230 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 110 209 1.4E-12 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CHH28_RS05010 96b602c4dd69dd4f1811fec20e1ac46f 230 Gene3D G3DSA:3.40.50.1240 1 225 1.4E-29 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CHH28_RS05010 96b602c4dd69dd4f1811fec20e1ac46f 230 SUPERFAMILY SSF53254 1 220 3.14E-30 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CHH28_RS11900 9bcd054d9cf95fcf52d7d26cf7d5bca6 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS11900 9bcd054d9cf95fcf52d7d26cf7d5bca6 117 SUPERFAMILY SSF74731 3 115 5.62E-50 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS11900 9bcd054d9cf95fcf52d7d26cf7d5bca6 117 Pfam PF00453 Ribosomal protein L20 3 109 9.7E-50 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS11900 9bcd054d9cf95fcf52d7d26cf7d5bca6 117 Gene3D G3DSA:1.10.1900.20 55 116 4.4E-29 T 29-03-2018 IPR035566 Ribosomal protein L20 C-terminal domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS11900 9bcd054d9cf95fcf52d7d26cf7d5bca6 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.357 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS11900 9bcd054d9cf95fcf52d7d26cf7d5bca6 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.0E-52 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS11900 9bcd054d9cf95fcf52d7d26cf7d5bca6 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.4E-42 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS11900 9bcd054d9cf95fcf52d7d26cf7d5bca6 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.4E-42 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS11900 9bcd054d9cf95fcf52d7d26cf7d5bca6 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.4E-42 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS11900 9bcd054d9cf95fcf52d7d26cf7d5bca6 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-14 T 29-03-2018 CHH28_RS02105 ade9c278fcff079e202d8b58e8d2c7c7 316 Pfam PF12833 Helix-turn-helix domain 232 306 1.1E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS02105 ade9c278fcff079e202d8b58e8d2c7c7 316 Gene3D G3DSA:3.40.50.880 1 201 2.0E-41 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS02105 ade9c278fcff079e202d8b58e8d2c7c7 316 Pfam PF01965 DJ-1/PfpI family 1 171 2.0E-13 T 29-03-2018 IPR002818 DJ-1/PfpI CHH28_RS02105 ade9c278fcff079e202d8b58e8d2c7c7 316 SUPERFAMILY SSF52317 1 191 2.02E-32 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS02105 ade9c278fcff079e202d8b58e8d2c7c7 316 Gene3D G3DSA:3.90.1240.10 202 314 1.1E-25 T 29-03-2018 CHH28_RS02105 ade9c278fcff079e202d8b58e8d2c7c7 316 SUPERFAMILY SSF46689 210 260 8.6E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS02105 ade9c278fcff079e202d8b58e8d2c7c7 316 SMART SM00342 226 308 4.3E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS02105 ade9c278fcff079e202d8b58e8d2c7c7 316 SUPERFAMILY SSF46689 262 310 1.67E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS16500 fd483b823113148cf78b77ef6c5f4345 187 Gene3D G3DSA:3.40.30.10 37 186 6.4E-27 T 29-03-2018 CHH28_RS16500 fd483b823113148cf78b77ef6c5f4345 187 PRINTS PR01011 Glutathione peroxidase family signature 150 159 2.4E-7 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CHH28_RS16500 fd483b823113148cf78b77ef6c5f4345 187 PRINTS PR01011 Glutathione peroxidase family signature 91 107 2.4E-7 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CHH28_RS16500 fd483b823113148cf78b77ef6c5f4345 187 PRINTS PR01011 Glutathione peroxidase family signature 56 73 2.4E-7 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CHH28_RS16500 fd483b823113148cf78b77ef6c5f4345 187 ProSitePatterns PS00460 Glutathione peroxidases active site. 58 73 - T 29-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 CHH28_RS16500 fd483b823113148cf78b77ef6c5f4345 187 PIRSF PIRSF000303 14 186 2.6E-44 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CHH28_RS16500 fd483b823113148cf78b77ef6c5f4345 187 Pfam PF00255 Glutathione peroxidase 54 141 8.5E-22 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CHH28_RS16500 fd483b823113148cf78b77ef6c5f4345 187 SUPERFAMILY SSF52833 37 184 1.81E-36 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 SUPERFAMILY SSF55781 2 158 1.42E-31 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 433 717 1.6E-97 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 SUPERFAMILY SSF51621 429 719 5.76E-101 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 SUPERFAMILY SSF52009 302 424 9.81E-31 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 Gene3D G3DSA:3.20.20.60 433 750 3.1E-90 T 29-03-2018 CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 Pfam PF05524 PEP-utilising enzyme, N-terminal 181 303 5.2E-23 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 Gene3D G3DSA:3.30.450.40 1 161 9.9E-30 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 Pfam PF00391 PEP-utilising enzyme, mobile domain 331 403 7.4E-19 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 SUPERFAMILY SSF47831 207 320 1.7E-29 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 624 642 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 Pfam PF01590 GAF domain 17 152 1.8E-13 T 29-03-2018 IPR003018 GAF domain GO:0005515 CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 471 490 5.5E-23 T 29-03-2018 CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 624 639 5.5E-23 T 29-03-2018 CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 641 656 5.5E-23 T 29-03-2018 CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 677 689 5.5E-23 T 29-03-2018 CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 181 737 2.3E-137 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 Gene3D G3DSA:1.10.274.10 204 311 4.4E-31 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 Gene3D G3DSA:3.50.30.10 312 432 1.2E-21 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CHH28_RS03270 979828a0e2f138ecedaa795b1f0d5037 763 SMART SM00065 17 164 3.2E-22 T 29-03-2018 IPR003018 GAF domain GO:0005515 CHH28_RS14090 3b9cc5b272edb5af7a40dff55003ed9f 266 SUPERFAMILY SSF51695 19 254 2.07E-57 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CHH28_RS14090 3b9cc5b272edb5af7a40dff55003ed9f 266 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 22 251 2.8E-36 T 29-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CHH28_RS14090 3b9cc5b272edb5af7a40dff55003ed9f 266 Gene3D G3DSA:3.20.20.190 11 261 7.1E-57 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CHH28_RS10505 cb1e602aa486e55fd673c5c803700df0 353 SMART SM00342 266 349 2.3E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS10505 cb1e602aa486e55fd673c5c803700df0 353 Gene3D G3DSA:1.10.10.60 294 351 3.1E-14 T 29-03-2018 CHH28_RS10505 cb1e602aa486e55fd673c5c803700df0 353 Pfam PF12833 Helix-turn-helix domain 274 350 1.6E-14 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS10505 cb1e602aa486e55fd673c5c803700df0 353 Gene3D G3DSA:1.10.10.60 247 293 0.044 T 29-03-2018 CHH28_RS10505 cb1e602aa486e55fd673c5c803700df0 353 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 43 223 3.4E-36 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS10505 cb1e602aa486e55fd673c5c803700df0 353 SUPERFAMILY SSF46689 302 351 2.28E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS10505 cb1e602aa486e55fd673c5c803700df0 353 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 318 333 2.8E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS10505 cb1e602aa486e55fd673c5c803700df0 353 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 333 349 2.8E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS01460 9ecf23321ae3879de9fcdb63dbede803 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.6E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS01460 9ecf23321ae3879de9fcdb63dbede803 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.6E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS01460 9ecf23321ae3879de9fcdb63dbede803 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.6E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS01460 9ecf23321ae3879de9fcdb63dbede803 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.0E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS01460 9ecf23321ae3879de9fcdb63dbede803 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.0E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS01460 9ecf23321ae3879de9fcdb63dbede803 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 4.0E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS01460 9ecf23321ae3879de9fcdb63dbede803 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.0E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS01460 9ecf23321ae3879de9fcdb63dbede803 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.0E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS01460 9ecf23321ae3879de9fcdb63dbede803 287 Gene3D G3DSA:3.40.50.720 1 281 4.6E-55 T 29-03-2018 CHH28_RS01460 9ecf23321ae3879de9fcdb63dbede803 287 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 193 0.0086 T 29-03-2018 CHH28_RS01460 9ecf23321ae3879de9fcdb63dbede803 287 Pfam PF00106 short chain dehydrogenase 7 200 4.0E-47 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS01460 9ecf23321ae3879de9fcdb63dbede803 287 SUPERFAMILY SSF51735 1 272 4.77E-64 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS01460 9ecf23321ae3879de9fcdb63dbede803 287 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CHH28_RS09010 280c866982f144b10e0cead1e09b889c 263 Pfam PF13489 Methyltransferase domain 54 210 4.2E-11 T 29-03-2018 CHH28_RS09010 280c866982f144b10e0cead1e09b889c 263 Gene3D G3DSA:3.40.50.150 21 263 1.2E-30 T 29-03-2018 CHH28_RS09010 280c866982f144b10e0cead1e09b889c 263 SUPERFAMILY SSF53335 14 262 4.3E-33 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS09010 280c866982f144b10e0cead1e09b889c 263 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 15 263 36.195 T 29-03-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 CHH28_RS18185 c057db5212efad85f7dd441a1d35d74b 434 SUPERFAMILY SSF56973 196 344 4.58E-9 T 29-03-2018 CHH28_RS18185 c057db5212efad85f7dd441a1d35d74b 434 Gene3D G3DSA:2.100.10.30 37 187 4.0E-13 T 29-03-2018 CHH28_RS18185 c057db5212efad85f7dd441a1d35d74b 434 Gene3D G3DSA:2.170.15.10 188 360 1.3E-17 T 29-03-2018 CHH28_RS18185 c057db5212efad85f7dd441a1d35d74b 434 SUPERFAMILY SSF51101 55 170 1.57E-7 T 29-03-2018 IPR001229 Jacalin-like lectin domain CHH28_RS00475 5915c38bd14ad3e88d855978bbc50096 246 Gene3D G3DSA:3.20.20.70 1 246 2.0E-100 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS00475 5915c38bd14ad3e88d855978bbc50096 246 SUPERFAMILY SSF51351 1 245 3.27E-90 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS00475 5915c38bd14ad3e88d855978bbc50096 246 ProSitePatterns PS00171 Triosephosphate isomerase active site. 163 173 - T 29-03-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS00475 5915c38bd14ad3e88d855978bbc50096 246 Pfam PF00121 Triosephosphate isomerase 5 244 1.1E-91 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS00475 5915c38bd14ad3e88d855978bbc50096 246 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 238 5.4E-66 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS00475 5915c38bd14ad3e88d855978bbc50096 246 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 246 37.603 T 29-03-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS16280 a787b4462d2fb1508a1d9fbc098ff08d 347 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 1 335 26.59 T 29-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CHH28_RS16280 a787b4462d2fb1508a1d9fbc098ff08d 347 Pfam PF03116 NQR2, RnfD, RnfE family 5 333 2.0E-104 T 29-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 CHH28_RS16280 a787b4462d2fb1508a1d9fbc098ff08d 347 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 6 334 1.3E-125 T 29-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CHH28_RS05760 c4e42890d27b2fe736dfc2f0a091ddba 375 Pfam PF00005 ABC transporter 35 176 2.4E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS05760 c4e42890d27b2fe736dfc2f0a091ddba 375 Gene3D G3DSA:2.40.50.140 305 365 3.2E-6 T 29-03-2018 CHH28_RS05760 c4e42890d27b2fe736dfc2f0a091ddba 375 SMART SM00382 43 228 8.7E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS05760 c4e42890d27b2fe736dfc2f0a091ddba 375 SUPERFAMILY SSF52540 18 258 3.28E-87 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS05760 c4e42890d27b2fe736dfc2f0a091ddba 375 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 49 373 1.5E-126 T 29-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 CHH28_RS05760 c4e42890d27b2fe736dfc2f0a091ddba 375 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS05760 c4e42890d27b2fe736dfc2f0a091ddba 375 Pfam PF08402 TOBE domain 294 373 1.6E-18 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CHH28_RS05760 c4e42890d27b2fe736dfc2f0a091ddba 375 Gene3D G3DSA:3.40.50.300 14 250 1.8E-73 T 29-03-2018 CHH28_RS05760 c4e42890d27b2fe736dfc2f0a091ddba 375 Gene3D G3DSA:2.40.50.100 253 304 0.0012 T 29-03-2018 CHH28_RS05760 c4e42890d27b2fe736dfc2f0a091ddba 375 SUPERFAMILY SSF50331 252 372 3.02E-20 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CHH28_RS08635 c213348cbfe44936c570af2a6bb036aa 241 Pfam PF00005 ABC transporter 19 166 9.5E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS08635 c213348cbfe44936c570af2a6bb036aa 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS08635 c213348cbfe44936c570af2a6bb036aa 241 SUPERFAMILY SSF52540 4 237 1.11E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS08635 c213348cbfe44936c570af2a6bb036aa 241 Gene3D G3DSA:3.40.50.300 1 236 2.7E-64 T 29-03-2018 CHH28_RS08635 c213348cbfe44936c570af2a6bb036aa 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 8.0E-9 T 29-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CHH28_RS08635 c213348cbfe44936c570af2a6bb036aa 241 SMART SM00382 28 231 4.3E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS08635 c213348cbfe44936c570af2a6bb036aa 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 1.5E-121 T 29-03-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 CHH28_RS12520 12f613b3fe0abd1be6c132b895d41d4f 668 Gene3D G3DSA:1.10.287.950 239 432 0.0079 T 29-03-2018 CHH28_RS12520 12f613b3fe0abd1be6c132b895d41d4f 668 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 466 633 1.3E-40 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS12520 12f613b3fe0abd1be6c132b895d41d4f 668 Gene3D G3DSA:1.10.287.950 433 652 7.6E-50 T 29-03-2018 CHH28_RS12520 12f613b3fe0abd1be6c132b895d41d4f 668 SMART SM00283 405 666 2.0E-62 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS12520 12f613b3fe0abd1be6c132b895d41d4f 668 Pfam PF08376 Nitrate and nitrite sensing 62 294 1.5E-46 T 29-03-2018 IPR013587 Nitrate/nitrite sensing protein CHH28_RS12520 12f613b3fe0abd1be6c132b895d41d4f 668 SUPERFAMILY SSF58104 358 667 8.5E-71 T 29-03-2018 CHH28_RS12520 12f613b3fe0abd1be6c132b895d41d4f 668 SMART SM00304 337 390 2.8E-4 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS11485 43ffe7089e98ce703642fb677ba48d87 852 Gene3D G3DSA:3.10.20.310 17 89 4.8E-5 T 29-03-2018 CHH28_RS11485 43ffe7089e98ce703642fb677ba48d87 852 Pfam PF07244 Surface antigen variable number repeat 264 342 3.8E-12 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CHH28_RS11485 43ffe7089e98ce703642fb677ba48d87 852 Pfam PF07244 Surface antigen variable number repeat 175 261 5.2E-16 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CHH28_RS11485 43ffe7089e98ce703642fb677ba48d87 852 Pfam PF07244 Surface antigen variable number repeat 346 419 1.6E-12 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CHH28_RS11485 43ffe7089e98ce703642fb677ba48d87 852 Pfam PF07244 Surface antigen variable number repeat 90 170 8.6E-10 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CHH28_RS11485 43ffe7089e98ce703642fb677ba48d87 852 PIRSF PIRSF006076 1 852 3.7E-250 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CHH28_RS11485 43ffe7089e98ce703642fb677ba48d87 852 Gene3D G3DSA:3.10.20.310 263 341 1.8E-15 T 29-03-2018 CHH28_RS11485 43ffe7089e98ce703642fb677ba48d87 852 Gene3D G3DSA:3.10.20.310 91 173 2.9E-12 T 29-03-2018 CHH28_RS11485 43ffe7089e98ce703642fb677ba48d87 852 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 852 24.845 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CHH28_RS11485 43ffe7089e98ce703642fb677ba48d87 852 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 22 852 1.1E-253 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CHH28_RS11485 43ffe7089e98ce703642fb677ba48d87 852 Gene3D G3DSA:2.40.160.50 378 852 6.2E-86 T 29-03-2018 CHH28_RS11485 43ffe7089e98ce703642fb677ba48d87 852 Pfam PF01103 Surface antigen 446 852 3.9E-77 T 29-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CHH28_RS11485 43ffe7089e98ce703642fb677ba48d87 852 Gene3D G3DSA:3.10.20.310 174 262 4.2E-21 T 29-03-2018 CHH28_RS04955 e33670cbd739e6555144f805db6b7881 236 Gene3D G3DSA:3.60.10.10 15 233 1.2E-22 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS04955 e33670cbd739e6555144f805db6b7881 236 SUPERFAMILY SSF56219 27 235 5.1E-30 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS04955 e33670cbd739e6555144f805db6b7881 236 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 23 225 1.4E-10 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS15105 df18dc82975ac13edec1ae2d9a86ae37 212 Pfam PF00694 Aconitase C-terminal domain 1 132 1.0E-36 T 29-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS15105 df18dc82975ac13edec1ae2d9a86ae37 212 Gene3D G3DSA:3.20.19.10 1 184 2.4E-50 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CHH28_RS15105 df18dc82975ac13edec1ae2d9a86ae37 212 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 2.0E-85 T 29-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CHH28_RS15105 df18dc82975ac13edec1ae2d9a86ae37 212 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 44.911 T 29-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CHH28_RS15105 df18dc82975ac13edec1ae2d9a86ae37 212 SUPERFAMILY SSF52016 1 205 5.69E-63 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CHH28_RS12425 6f7643c56364af08c00cee97576da326 402 SUPERFAMILY SSF63825 171 383 7.85E-7 T 29-03-2018 CHH28_RS12425 6f7643c56364af08c00cee97576da326 402 Gene3D G3DSA:2.120.10.30 149 397 2.0E-6 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CHH28_RS08335 0b9e03a2d649e564d386c19b3b825b62 127 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 29-03-2018 IPR019897 RidA, conserved site CHH28_RS08335 0b9e03a2d649e564d386c19b3b825b62 127 Gene3D G3DSA:3.30.1330.40 1 127 5.0E-48 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CHH28_RS08335 0b9e03a2d649e564d386c19b3b825b62 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 125 2.0E-53 T 29-03-2018 IPR006056 RidA family CHH28_RS08335 0b9e03a2d649e564d386c19b3b825b62 127 Pfam PF01042 Endoribonuclease L-PSP 10 125 4.3E-42 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CHH28_RS08335 0b9e03a2d649e564d386c19b3b825b62 127 SUPERFAMILY SSF55298 5 127 6.44E-46 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CHH28_RS12360 999f8abfcdf4681d999fc7b9d54b6108 155 PRINTS PR00421 Thioredoxin family signature 53 62 6.1E-5 T 29-03-2018 CHH28_RS12360 999f8abfcdf4681d999fc7b9d54b6108 155 PRINTS PR00421 Thioredoxin family signature 45 53 6.1E-5 T 29-03-2018 CHH28_RS12360 999f8abfcdf4681d999fc7b9d54b6108 155 PRINTS PR00421 Thioredoxin family signature 116 127 6.1E-5 T 29-03-2018 CHH28_RS12360 999f8abfcdf4681d999fc7b9d54b6108 155 Gene3D G3DSA:3.40.30.10 12 155 7.9E-41 T 29-03-2018 CHH28_RS12360 999f8abfcdf4681d999fc7b9d54b6108 155 Pfam PF00578 AhpC/TSA family 19 134 2.0E-27 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CHH28_RS12360 999f8abfcdf4681d999fc7b9d54b6108 155 SUPERFAMILY SSF52833 14 151 1.23E-43 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS08525 da599dbe8c123ffc07667e55836207d8 342 PIRSF PIRSF005632 1 342 1.1E-189 T 29-03-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit CHH28_RS08525 da599dbe8c123ffc07667e55836207d8 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 6.3E-35 T 29-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CHH28_RS08525 da599dbe8c123ffc07667e55836207d8 342 Gene3D G3DSA:3.20.20.210 1 341 2.1E-89 T 29-03-2018 CHH28_RS08525 da599dbe8c123ffc07667e55836207d8 342 SUPERFAMILY SSF51726 7 341 2.49E-69 T 29-03-2018 CHH28_RS10785 feff600fb9f7b2d7fd68bb5235e96d8c 133 SUPERFAMILY SSF53850 5 131 9.67E-16 T 29-03-2018 CHH28_RS10785 feff600fb9f7b2d7fd68bb5235e96d8c 133 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 6 128 2.3E-7 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS10785 feff600fb9f7b2d7fd68bb5235e96d8c 133 Gene3D G3DSA:3.40.190.10 7 131 6.8E-9 T 29-03-2018 CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 Gene3D G3DSA:3.30.450.20 138 251 6.7E-18 T 29-03-2018 CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 496 576 6.6E-30 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 Gene3D G3DSA:1.20.1270.60 497 584 2.2E-31 T 29-03-2018 CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 SMART SM00086 447 490 4.6 T 29-03-2018 IPR001610 PAC motif CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 SMART SM00086 89 129 0.086 T 29-03-2018 IPR001610 PAC motif CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 SMART SM00086 210 250 3.6 T 29-03-2018 IPR001610 PAC motif CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 SMART SM00086 331 373 0.0011 T 29-03-2018 IPR001610 PAC motif CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 SUPERFAMILY SSF55785 24 131 3.38E-23 T 29-03-2018 IPR000014 PAS domain CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 Gene3D G3DSA:3.30.450.20 383 496 9.5E-12 T 29-03-2018 CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 Gene3D G3DSA:3.30.450.20 12 137 1.3E-20 T 29-03-2018 CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 SUPERFAMILY SSF58104 491 582 9.81E-39 T 29-03-2018 CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 SMART SM00283 439 583 0.0058 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 SUPERFAMILY SSF55785 391 491 6.44E-8 T 29-03-2018 IPR000014 PAS domain CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 Pfam PF13426 PAS domain 24 128 3.8E-14 T 29-03-2018 IPR000014 PAS domain CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 Pfam PF13426 PAS domain 145 249 1.1E-11 T 29-03-2018 IPR000014 PAS domain CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 Pfam PF13426 PAS domain 269 370 6.3E-18 T 29-03-2018 IPR000014 PAS domain CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 Pfam PF13426 PAS domain 393 488 0.0028 T 29-03-2018 IPR000014 PAS domain CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 SMART SM00091 380 449 2.7 T 29-03-2018 IPR000014 PAS domain CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 SMART SM00091 134 200 1.2E-5 T 29-03-2018 IPR000014 PAS domain CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 SMART SM00091 13 79 4.2E-10 T 29-03-2018 IPR000014 PAS domain CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 SMART SM00091 258 329 1.3E-7 T 29-03-2018 IPR000014 PAS domain CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 Gene3D G3DSA:3.30.450.20 252 369 2.4E-21 T 29-03-2018 CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 SUPERFAMILY SSF55785 145 256 2.62E-21 T 29-03-2018 IPR000014 PAS domain CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 SUPERFAMILY SSF55785 269 370 2.09E-23 T 29-03-2018 IPR000014 PAS domain CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 131 256 1.7E-19 T 29-03-2018 IPR000014 PAS domain CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 131 1.5E-22 T 29-03-2018 IPR000014 PAS domain CHH28_RS07170 bfdf055a853a629ea19cd630f3b4761c 584 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 257 374 4.2E-16 T 29-03-2018 IPR000014 PAS domain CHH28_RS16095 1459c0ef62792780230e4e0ade8a966c 715 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 29-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CHH28_RS16095 1459c0ef62792780230e4e0ade8a966c 715 SUPERFAMILY SSF48179 622 714 7.65E-24 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CHH28_RS16095 1459c0ef62792780230e4e0ade8a966c 715 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 224 1.4E-35 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CHH28_RS16095 1459c0ef62792780230e4e0ade8a966c 715 Gene3D G3DSA:3.90.226.10 3 207 3.6E-47 T 29-03-2018 CHH28_RS16095 1459c0ef62792780230e4e0ade8a966c 715 SUPERFAMILY SSF48179 496 618 3.32E-28 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CHH28_RS16095 1459c0ef62792780230e4e0ade8a966c 715 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 29-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CHH28_RS16095 1459c0ef62792780230e4e0ade8a966c 715 Gene3D G3DSA:1.10.1040.10 622 713 2.7E-16 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CHH28_RS16095 1459c0ef62792780230e4e0ade8a966c 715 Gene3D G3DSA:1.10.1040.10 497 597 9.9E-21 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CHH28_RS16095 1459c0ef62792780230e4e0ade8a966c 715 Gene3D G3DSA:3.40.50.720 256 496 3.0E-62 T 29-03-2018 CHH28_RS16095 1459c0ef62792780230e4e0ade8a966c 715 SUPERFAMILY SSF52096 2 305 4.06E-65 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS16095 1459c0ef62792780230e4e0ade8a966c 715 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 592 1.3E-24 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CHH28_RS16095 1459c0ef62792780230e4e0ade8a966c 715 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 495 1.5E-62 T 29-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CHH28_RS16095 1459c0ef62792780230e4e0ade8a966c 715 SUPERFAMILY SSF51735 314 496 9.63E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS19045 c7483c8ea0aa7ff70c2691593b1ada47 1787 Gene3D G3DSA:3.40.50.150 369 552 2.1E-4 T 29-03-2018 CHH28_RS19045 c7483c8ea0aa7ff70c2691593b1ada47 1787 Gene3D G3DSA:1.20.120.230 761 1139 0.27 T 29-03-2018 CHH28_RS19045 c7483c8ea0aa7ff70c2691593b1ada47 1787 Gene3D G3DSA:3.40.50.300 1255 1464 6.2E-10 T 29-03-2018 CHH28_RS19045 c7483c8ea0aa7ff70c2691593b1ada47 1787 SUPERFAMILY SSF52540 1295 1445 7.63E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS19045 c7483c8ea0aa7ff70c2691593b1ada47 1787 Pfam PF12458 ATPase involved in DNA repair 35 481 1.5E-201 T 29-03-2018 IPR020958 DUF3686 CHH28_RS19045 c7483c8ea0aa7ff70c2691593b1ada47 1787 Pfam PF07728 AAA domain (dynein-related subfamily) 1300 1423 6.5E-5 T 29-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CHH28_RS16975 59a8d1adbedf83685873b88142886557 314 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 25 277 3.0E-42 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CHH28_RS16975 59a8d1adbedf83685873b88142886557 314 Gene3D G3DSA:3.40.190.10 18 153 6.2E-14 T 29-03-2018 CHH28_RS16975 59a8d1adbedf83685873b88142886557 314 Gene3D G3DSA:3.40.190.10 154 312 1.1E-22 T 29-03-2018 CHH28_RS16975 59a8d1adbedf83685873b88142886557 314 SUPERFAMILY SSF53850 21 295 2.51E-65 T 29-03-2018 CHH28_RS02965 bcc2979406de6e06bace716e5728f25e 85 SUPERFAMILY SSF54862 3 77 3.29E-19 T 29-03-2018 CHH28_RS02965 bcc2979406de6e06bace716e5728f25e 85 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CHH28_RS02965 bcc2979406de6e06bace716e5728f25e 85 Gene3D G3DSA:3.30.70.20 2 83 1.7E-18 T 29-03-2018 CHH28_RS02965 bcc2979406de6e06bace716e5728f25e 85 Pfam PF00037 4Fe-4S binding domain 4 25 5.2E-6 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CHH28_RS06745 e8f00d55933219fc951d95084cedc6f0 187 Pfam PF00857 Isochorismatase family 3 148 3.2E-33 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CHH28_RS06745 e8f00d55933219fc951d95084cedc6f0 187 SUPERFAMILY SSF52499 2 154 2.35E-42 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CHH28_RS06745 e8f00d55933219fc951d95084cedc6f0 187 Gene3D G3DSA:3.40.50.850 1 187 4.8E-38 T 29-03-2018 CHH28_RS11370 d21ac01d454bc13f7ea4fb0ffdec0310 150 Pfam PF02627 Carboxymuconolactone decarboxylase family 29 93 2.2E-12 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CHH28_RS11370 d21ac01d454bc13f7ea4fb0ffdec0310 150 Gene3D G3DSA:1.20.1290.10 2 149 1.1E-26 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CHH28_RS11370 d21ac01d454bc13f7ea4fb0ffdec0310 150 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 31 77 1.2E-11 T 29-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CHH28_RS11370 d21ac01d454bc13f7ea4fb0ffdec0310 150 SUPERFAMILY SSF69118 12 142 3.19E-32 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CHH28_RS12710 b06d39f9ddbaf2b18df0449549bd8bf6 576 SUPERFAMILY SSF51011 504 571 2.09E-7 T 29-03-2018 CHH28_RS12710 b06d39f9ddbaf2b18df0449549bd8bf6 576 SUPERFAMILY SSF51445 53 364 5.16E-94 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CHH28_RS12710 b06d39f9ddbaf2b18df0449549bd8bf6 576 SUPERFAMILY SSF51445 405 528 5.16E-94 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CHH28_RS12710 b06d39f9ddbaf2b18df0449549bd8bf6 576 Gene3D G3DSA:3.20.20.80 75 497 4.8E-55 T 29-03-2018 CHH28_RS12710 b06d39f9ddbaf2b18df0449549bd8bf6 576 Pfam PF00128 Alpha amylase, catalytic domain 90 286 4.5E-18 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CHH28_RS12710 b06d39f9ddbaf2b18df0449549bd8bf6 576 SMART SM00642 45 488 1.3E-6 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CHH28_RS12710 b06d39f9ddbaf2b18df0449549bd8bf6 576 Gene3D G3DSA:2.60.40.1180 500 572 2.6E-7 T 29-03-2018 CHH28_RS12710 b06d39f9ddbaf2b18df0449549bd8bf6 576 PIRSF PIRSF003059 6 573 6.0E-184 T 29-03-2018 IPR016377 Sucrose phosphorylase-related GO:0005985|GO:0009018 KEGG: 00500+2.4.1.7|MetaCyc: PWY-5384 CHH28_RS11285 978efd8dd4297ffc452c7e10dae54df4 376 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 5 359 5.2E-142 T 29-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CHH28_RS11285 978efd8dd4297ffc452c7e10dae54df4 376 SUPERFAMILY SSF102114 108 310 9.68E-15 T 29-03-2018 CHH28_RS11285 978efd8dd4297ffc452c7e10dae54df4 376 Gene3D G3DSA:3.20.20.70 18 368 3.0E-40 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS11285 978efd8dd4297ffc452c7e10dae54df4 376 Pfam PF04055 Radical SAM superfamily 112 283 4.3E-18 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CHH28_RS11285 978efd8dd4297ffc452c7e10dae54df4 376 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 8 355 72.469 T 29-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CHH28_RS11285 978efd8dd4297ffc452c7e10dae54df4 376 PIRSF PIRSF006004 4 368 8.3E-148 T 29-03-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CHH28_RS19690 bba24c166613fe3d3a2fe5cc7c8f994e 217 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 117 214 2.6E-30 T 29-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CHH28_RS19690 bba24c166613fe3d3a2fe5cc7c8f994e 217 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 97 3.6E-13 T 29-03-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 CHH28_RS19690 bba24c166613fe3d3a2fe5cc7c8f994e 217 Gene3D G3DSA:2.160.20.70 97 217 2.2E-34 T 29-03-2018 CHH28_RS19690 bba24c166613fe3d3a2fe5cc7c8f994e 217 SUPERFAMILY SSF63848 114 215 3.92E-30 T 29-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CHH28_RS19690 bba24c166613fe3d3a2fe5cc7c8f994e 217 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 216 21.555 T 29-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CHH28_RS19690 bba24c166613fe3d3a2fe5cc7c8f994e 217 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 216 3.6E-49 T 29-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CHH28_RS01065 bf8dca63dc522f0d15cd3635c8f304ff 782 Gene3D G3DSA:3.30.365.10 455 613 8.7E-48 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CHH28_RS01065 bf8dca63dc522f0d15cd3635c8f304ff 782 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 162 708 5.0E-203 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CHH28_RS01065 bf8dca63dc522f0d15cd3635c8f304ff 782 SMART SM01008 37 144 5.6E-41 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CHH28_RS01065 bf8dca63dc522f0d15cd3635c8f304ff 782 Gene3D G3DSA:3.30.365.10 275 435 9.8E-62 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CHH28_RS01065 bf8dca63dc522f0d15cd3635c8f304ff 782 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 37 143 3.7E-25 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CHH28_RS01065 bf8dca63dc522f0d15cd3635c8f304ff 782 Gene3D G3DSA:3.30.365.10 166 274 2.5E-33 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CHH28_RS01065 bf8dca63dc522f0d15cd3635c8f304ff 782 Gene3D G3DSA:3.30.365.10 614 780 6.9E-61 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CHH28_RS01065 bf8dca63dc522f0d15cd3635c8f304ff 782 Gene3D G3DSA:3.90.1170.50 23 145 4.1E-29 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CHH28_RS01065 bf8dca63dc522f0d15cd3635c8f304ff 782 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 25 775 0.0 T 29-03-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 CHH28_RS01065 bf8dca63dc522f0d15cd3635c8f304ff 782 SUPERFAMILY SSF56003 145 775 1.02E-202 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CHH28_RS01065 bf8dca63dc522f0d15cd3635c8f304ff 782 SUPERFAMILY SSF54665 21 143 4.58E-36 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CHH28_RS10900 b589622acb27c8ee518747081c84a5f9 239 SUPERFAMILY SSF118196 6 225 1.23E-69 T 29-03-2018 IPR023370 TsaA-like domain CHH28_RS10900 b589622acb27c8ee518747081c84a5f9 239 Gene3D G3DSA:2.40.30.70 8 149 3.1E-50 T 29-03-2018 IPR023370 TsaA-like domain CHH28_RS10900 b589622acb27c8ee518747081c84a5f9 239 Pfam PF01980 Uncharacterised protein family UPF0066 24 144 3.6E-40 T 29-03-2018 IPR023370 TsaA-like domain CHH28_RS10900 b589622acb27c8ee518747081c84a5f9 239 ProSitePatterns PS01318 TsaA-like domain signature. 92 103 - T 29-03-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site CHH28_RS10900 b589622acb27c8ee518747081c84a5f9 239 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 6 149 2.6E-45 T 29-03-2018 IPR023370 TsaA-like domain CHH28_RS10900 b589622acb27c8ee518747081c84a5f9 239 Gene3D G3DSA:3.30.2310.10 150 232 2.2E-20 T 29-03-2018 CHH28_RS19360 a3f9c34ddaf53af583ba6dd794368caa 402 Gene3D G3DSA:3.90.1150.10 10 262 1.1E-35 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS19360 a3f9c34ddaf53af583ba6dd794368caa 402 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CHH28_RS19360 a3f9c34ddaf53af583ba6dd794368caa 402 Pfam PF00155 Aminotransferase class I and II 36 395 1.7E-53 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CHH28_RS19360 a3f9c34ddaf53af583ba6dd794368caa 402 SUPERFAMILY SSF53383 11 399 2.82E-95 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS19360 a3f9c34ddaf53af583ba6dd794368caa 402 Gene3D G3DSA:3.90.1150.10 263 402 2.2E-35 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS01125 6bf3096c0870f3bf97c4c0f610d92735 191 SUPERFAMILY SSF55729 57 172 7.03E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS01125 6bf3096c0870f3bf97c4c0f610d92735 191 Pfam PF13302 Acetyltransferase (GNAT) domain 55 171 8.3E-17 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS01125 6bf3096c0870f3bf97c4c0f610d92735 191 Gene3D G3DSA:3.40.630.30 4 178 6.9E-18 T 29-03-2018 CHH28_RS10625 0730d304b15b31b22364700ea702ece0 313 SMART SM00342 223 306 2.3E-29 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS10625 0730d304b15b31b22364700ea702ece0 313 Gene3D G3DSA:3.40.50.880 1 206 4.7E-45 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS10625 0730d304b15b31b22364700ea702ece0 313 Gene3D G3DSA:1.10.10.60 260 313 1.6E-12 T 29-03-2018 CHH28_RS10625 0730d304b15b31b22364700ea702ece0 313 Pfam PF01965 DJ-1/PfpI family 2 169 3.7E-12 T 29-03-2018 IPR002818 DJ-1/PfpI CHH28_RS10625 0730d304b15b31b22364700ea702ece0 313 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 260 302 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CHH28_RS10625 0730d304b15b31b22364700ea702ece0 313 Pfam PF12833 Helix-turn-helix domain 229 308 1.2E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS10625 0730d304b15b31b22364700ea702ece0 313 SUPERFAMILY SSF46689 207 257 1.26E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS10625 0730d304b15b31b22364700ea702ece0 313 SUPERFAMILY SSF52317 2 190 7.16E-39 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS10625 0730d304b15b31b22364700ea702ece0 313 Gene3D G3DSA:1.10.10.60 207 259 6.5E-13 T 29-03-2018 CHH28_RS10625 0730d304b15b31b22364700ea702ece0 313 SUPERFAMILY SSF46689 260 310 7.77E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS00650 32cd907656f5d0eac52049b2dd9b7b9e 94 Gene3D G3DSA:1.10.3340.10 1 81 5.1E-41 T 29-03-2018 IPR023163 SMc04008-like domain CHH28_RS00650 32cd907656f5d0eac52049b2dd9b7b9e 94 Pfam PF06844 Protein of unknown function (DUF1244) 25 91 9.9E-37 T 29-03-2018 IPR023163 SMc04008-like domain CHH28_RS00650 32cd907656f5d0eac52049b2dd9b7b9e 94 SUPERFAMILY SSF158757 3 75 1.44E-36 T 29-03-2018 IPR023163 SMc04008-like domain CHH28_RS18260 39c2b3bbc34d3f7dc36ec9d3c1ddf66b 891 Pfam PF08453 Peptidase family M9 N-terminal 246 416 2.0E-33 T 29-03-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain CHH28_RS18260 39c2b3bbc34d3f7dc36ec9d3c1ddf66b 891 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 590 606 1.2E-29 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CHH28_RS18260 39c2b3bbc34d3f7dc36ec9d3c1ddf66b 891 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 655 670 1.2E-29 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CHH28_RS18260 39c2b3bbc34d3f7dc36ec9d3c1ddf66b 891 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 304 322 1.2E-29 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CHH28_RS18260 39c2b3bbc34d3f7dc36ec9d3c1ddf66b 891 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 632 650 1.2E-29 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CHH28_RS18260 39c2b3bbc34d3f7dc36ec9d3c1ddf66b 891 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 572 586 1.2E-29 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CHH28_RS18260 39c2b3bbc34d3f7dc36ec9d3c1ddf66b 891 Pfam PF01752 Collagenase 485 755 9.3E-95 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 CHH28_RS14560 2abd6f6a082a4d33ef60ac383fa850fa 381 SUPERFAMILY SSF46689 253 373 1.93E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS14560 2abd6f6a082a4d33ef60ac383fa850fa 381 Gene3D G3DSA:3.40.50.300 37 211 6.8E-25 T 29-03-2018 CHH28_RS14560 2abd6f6a082a4d33ef60ac383fa850fa 381 Pfam PF00158 Sigma-54 interaction domain 40 206 7.8E-61 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CHH28_RS14560 2abd6f6a082a4d33ef60ac383fa850fa 381 Gene3D G3DSA:1.10.10.60 312 375 1.2E-7 T 29-03-2018 CHH28_RS14560 2abd6f6a082a4d33ef60ac383fa850fa 381 Pfam PF02954 Bacterial regulatory protein, Fis family 331 371 1.1E-4 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS14560 2abd6f6a082a4d33ef60ac383fa850fa 381 SUPERFAMILY SSF52540 39 281 3.79E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS14560 2abd6f6a082a4d33ef60ac383fa850fa 381 SMART SM00382 60 204 1.1E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS14560 2abd6f6a082a4d33ef60ac383fa850fa 381 Gene3D G3DSA:1.10.8.60 213 283 1.2E-23 T 29-03-2018 CHH28_RS01940 a98a0f93a74adacd66bfc5a73c760e2e 798 SUPERFAMILY SSF53756 408 786 1.05E-19 T 29-03-2018 CHH28_RS01940 a98a0f93a74adacd66bfc5a73c760e2e 798 SUPERFAMILY SSF53756 175 381 4.71E-37 T 29-03-2018 CHH28_RS01940 a98a0f93a74adacd66bfc5a73c760e2e 798 Pfam PF13692 Glycosyl transferases group 1 621 746 7.9E-9 T 29-03-2018 CHH28_RS01940 a98a0f93a74adacd66bfc5a73c760e2e 798 Gene3D G3DSA:3.40.50.2000 584 783 5.0E-10 T 29-03-2018 CHH28_RS01940 a98a0f93a74adacd66bfc5a73c760e2e 798 Pfam PF00534 Glycosyl transferases group 1 209 365 1.9E-20 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CHH28_RS01940 a98a0f93a74adacd66bfc5a73c760e2e 798 Gene3D G3DSA:3.40.50.2000 208 370 4.8E-29 T 29-03-2018 CHH28_RS19385 f14446dfe5e0dbeb61c96715ff42fe1a 452 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 23 444 8.6E-159 T 29-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CHH28_RS19385 f14446dfe5e0dbeb61c96715ff42fe1a 452 Gene3D G3DSA:3.30.460.10 20 180 2.5E-47 T 29-03-2018 CHH28_RS19385 f14446dfe5e0dbeb61c96715ff42fe1a 452 SUPERFAMILY SSF81301 25 181 1.0E-38 T 29-03-2018 CHH28_RS19385 f14446dfe5e0dbeb61c96715ff42fe1a 452 SUPERFAMILY SSF81891 182 415 4.05E-49 T 29-03-2018 CHH28_RS19385 f14446dfe5e0dbeb61c96715ff42fe1a 452 Pfam PF12626 Polymerase A arginine-rich C-terminus 325 446 7.4E-40 T 29-03-2018 IPR025866 Polymerase A arginine-rich C-terminal domain CHH28_RS19385 f14446dfe5e0dbeb61c96715ff42fe1a 452 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 17 450 37.544 T 29-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CHH28_RS19385 f14446dfe5e0dbeb61c96715ff42fe1a 452 Gene3D G3DSA:1.10.3090.10 181 427 8.5E-42 T 29-03-2018 CHH28_RS19385 f14446dfe5e0dbeb61c96715ff42fe1a 452 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 211 272 5.1E-22 T 29-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CHH28_RS19385 f14446dfe5e0dbeb61c96715ff42fe1a 452 Pfam PF01743 Poly A polymerase head domain 55 184 9.7E-33 T 29-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CHH28_RS10405 bc48e4b27ac3f8a05e5f0023807dda41 422 Pfam PF03471 Transporter associated domain 346 420 5.7E-13 T 29-03-2018 IPR005170 Transporter-associated domain CHH28_RS10405 bc48e4b27ac3f8a05e5f0023807dda41 422 Pfam PF00571 CBS domain 279 328 3.0E-5 T 29-03-2018 IPR000644 CBS domain CHH28_RS10405 bc48e4b27ac3f8a05e5f0023807dda41 422 Gene3D G3DSA:3.10.580.10 189 336 2.3E-27 T 29-03-2018 CHH28_RS10405 bc48e4b27ac3f8a05e5f0023807dda41 422 Gene3D G3DSA:3.30.465.10 337 422 1.7E-12 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CHH28_RS10405 bc48e4b27ac3f8a05e5f0023807dda41 422 SMART SM01091 344 422 4.0E-17 T 29-03-2018 IPR005170 Transporter-associated domain CHH28_RS10405 bc48e4b27ac3f8a05e5f0023807dda41 422 Pfam PF01595 Domain of unknown function DUF21 15 184 2.3E-46 T 29-03-2018 IPR002550 Domain of unknown function DUF21 CHH28_RS10405 bc48e4b27ac3f8a05e5f0023807dda41 422 SUPERFAMILY SSF54631 194 331 5.18E-28 T 29-03-2018 CHH28_RS10405 bc48e4b27ac3f8a05e5f0023807dda41 422 SUPERFAMILY SSF56176 342 420 1.53E-17 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CHH28_RS06920 1b0dd9de0eefe8c24de154ded7550557 457 Pfam PF03796 DnaB-like helicase C terminal domain 189 445 1.2E-107 T 29-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CHH28_RS06920 1b0dd9de0eefe8c24de154ded7550557 457 Gene3D G3DSA:1.10.860.10 2 154 5.0E-47 T 29-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CHH28_RS06920 1b0dd9de0eefe8c24de154ded7550557 457 SUPERFAMILY SSF48024 10 122 2.09E-36 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CHH28_RS06920 1b0dd9de0eefe8c24de154ded7550557 457 Pfam PF00772 DnaB-like helicase N terminal domain 12 113 1.8E-34 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CHH28_RS06920 1b0dd9de0eefe8c24de154ded7550557 457 Gene3D G3DSA:3.40.50.300 171 454 1.5E-60 T 29-03-2018 CHH28_RS06920 1b0dd9de0eefe8c24de154ded7550557 457 SUPERFAMILY SSF52540 187 437 1.26E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS06920 1b0dd9de0eefe8c24de154ded7550557 457 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 12 447 1.9E-167 T 29-03-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CHH28_RS01260 4cf186a83473d865fcff12e95944379f 194 PIRSF PIRSF000349 1 194 3.4E-84 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CHH28_RS01260 4cf186a83473d865fcff12e95944379f 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 29-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CHH28_RS01260 4cf186a83473d865fcff12e95944379f 194 SUPERFAMILY SSF46609 1 84 2.49E-35 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CHH28_RS01260 4cf186a83473d865fcff12e95944379f 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 2.1E-34 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CHH28_RS01260 4cf186a83473d865fcff12e95944379f 194 Gene3D G3DSA:1.10.287.990 20 82 2.0E-26 T 29-03-2018 CHH28_RS01260 4cf186a83473d865fcff12e95944379f 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 9.0E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CHH28_RS01260 4cf186a83473d865fcff12e95944379f 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 9.0E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CHH28_RS01260 4cf186a83473d865fcff12e95944379f 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 9.0E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CHH28_RS01260 4cf186a83473d865fcff12e95944379f 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 9.0E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CHH28_RS01260 4cf186a83473d865fcff12e95944379f 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 9.0E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CHH28_RS01260 4cf186a83473d865fcff12e95944379f 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 5.2E-37 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CHH28_RS01260 4cf186a83473d865fcff12e95944379f 194 SUPERFAMILY SSF54719 84 193 9.43E-43 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CHH28_RS15005 679b3abb22052c1eb8b9c2d726c7fb33 454 SUPERFAMILY SSF56322 37 451 3.66E-106 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CHH28_RS15005 679b3abb22052c1eb8b9c2d726c7fb33 454 Gene3D G3DSA:3.60.120.10 30 452 1.1E-114 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CHH28_RS15005 679b3abb22052c1eb8b9c2d726c7fb33 454 PRINTS PR00095 Anthranilate synthase component I signature 402 416 1.3E-11 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CHH28_RS15005 679b3abb22052c1eb8b9c2d726c7fb33 454 PRINTS PR00095 Anthranilate synthase component I signature 387 401 1.3E-11 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CHH28_RS15005 679b3abb22052c1eb8b9c2d726c7fb33 454 PRINTS PR00095 Anthranilate synthase component I signature 293 306 1.3E-11 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CHH28_RS15005 679b3abb22052c1eb8b9c2d726c7fb33 454 PRINTS PR00095 Anthranilate synthase component I signature 307 320 1.3E-11 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CHH28_RS15005 679b3abb22052c1eb8b9c2d726c7fb33 454 Pfam PF00425 chorismate binding enzyme 194 445 1.4E-82 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CHH28_RS15005 679b3abb22052c1eb8b9c2d726c7fb33 454 Pfam PF04715 Anthranilate synthase component I, N terminal region 71 140 1.2E-4 T 29-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CHH28_RS06255 ba88b7df940bf9b075a211678e3cd13e 888 Gene3D G3DSA:3.30.450.20 310 444 2.2E-8 T 29-03-2018 CHH28_RS06255 ba88b7df940bf9b075a211678e3cd13e 888 SUPERFAMILY SSF55073 462 620 2.16E-46 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS06255 ba88b7df940bf9b075a211678e3cd13e 888 Gene3D G3DSA:3.20.20.450 626 882 3.0E-103 T 29-03-2018 IPR001633 EAL domain CHH28_RS06255 ba88b7df940bf9b075a211678e3cd13e 888 Pfam PF00563 EAL domain 634 868 3.2E-77 T 29-03-2018 IPR001633 EAL domain CHH28_RS06255 ba88b7df940bf9b075a211678e3cd13e 888 SMART SM00267 446 618 9.7E-59 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS06255 ba88b7df940bf9b075a211678e3cd13e 888 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 455 616 6.5E-37 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS06255 ba88b7df940bf9b075a211678e3cd13e 888 Gene3D G3DSA:3.30.70.270 451 625 1.1E-56 T 29-03-2018 CHH28_RS06255 ba88b7df940bf9b075a211678e3cd13e 888 SMART SM00052 628 873 1.1E-119 T 29-03-2018 IPR001633 EAL domain CHH28_RS06255 ba88b7df940bf9b075a211678e3cd13e 888 SUPERFAMILY SSF141868 633 878 1.15E-91 T 29-03-2018 IPR001633 EAL domain CHH28_RS06255 ba88b7df940bf9b075a211678e3cd13e 888 Pfam PF00990 Diguanylate cyclase, GGDEF domain 457 613 1.9E-44 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS06255 ba88b7df940bf9b075a211678e3cd13e 888 Pfam PF08447 PAS fold 363 434 3.8E-7 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CHH28_RS06255 ba88b7df940bf9b075a211678e3cd13e 888 SUPERFAMILY SSF55785 360 446 4.19E-8 T 29-03-2018 IPR000014 PAS domain CHH28_RS09735 7af359819164dd29ffb14a9526ac6fbb 650 Pfam PF16448 LapD/MoxY periplasmic domain 25 143 1.8E-31 T 29-03-2018 IPR032244 LapD/MoxY, periplasmic domain CHH28_RS09735 7af359819164dd29ffb14a9526ac6fbb 650 Gene3D G3DSA:3.20.20.450 402 647 1.8E-48 T 29-03-2018 IPR001633 EAL domain CHH28_RS09735 7af359819164dd29ffb14a9526ac6fbb 650 SMART SM00267 223 390 1.3E-22 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS09735 7af359819164dd29ffb14a9526ac6fbb 650 Pfam PF00563 EAL domain 406 641 8.9E-47 T 29-03-2018 IPR001633 EAL domain CHH28_RS09735 7af359819164dd29ffb14a9526ac6fbb 650 Pfam PF00990 Diguanylate cyclase, GGDEF domain 234 384 7.3E-28 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS09735 7af359819164dd29ffb14a9526ac6fbb 650 SUPERFAMILY SSF55073 240 389 9.42E-26 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS09735 7af359819164dd29ffb14a9526ac6fbb 650 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 231 389 1.2E-18 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS09735 7af359819164dd29ffb14a9526ac6fbb 650 Gene3D G3DSA:3.30.70.270 227 398 7.2E-34 T 29-03-2018 CHH28_RS09735 7af359819164dd29ffb14a9526ac6fbb 650 SUPERFAMILY SSF141868 406 643 2.48E-43 T 29-03-2018 IPR001633 EAL domain CHH28_RS09735 7af359819164dd29ffb14a9526ac6fbb 650 SMART SM00052 400 646 1.8E-20 T 29-03-2018 IPR001633 EAL domain CHH28_RS04010 dded2f2bd12a863e08e959f8674cbcb0 260 SUPERFAMILY SSF52540 3 253 9.46E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS04010 dded2f2bd12a863e08e959f8674cbcb0 260 Gene3D G3DSA:3.40.50.300 1 260 5.1E-61 T 29-03-2018 CHH28_RS04010 dded2f2bd12a863e08e959f8674cbcb0 260 PIRSF PIRSF009320 86 259 2.2E-7 T 29-03-2018 CHH28_RS04010 dded2f2bd12a863e08e959f8674cbcb0 260 PIRSF PIRSF009320 2 84 1.0E-12 T 29-03-2018 CHH28_RS04010 dded2f2bd12a863e08e959f8674cbcb0 260 Pfam PF13614 AAA domain 3 178 4.0E-64 T 29-03-2018 IPR025669 AAA domain CHH28_RS18530 7c4d073dfe35137ad743ecfe16b13df3 1161 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1033 0.0 T 29-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS18530 7c4d073dfe35137ad743ecfe16b13df3 1161 Pfam PF02811 PHP domain 7 171 2.8E-36 T 29-03-2018 IPR004013 PHP domain GO:0003824 CHH28_RS18530 7c4d073dfe35137ad743ecfe16b13df3 1161 SMART SM00481 6 73 6.8E-17 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CHH28_RS18530 7c4d073dfe35137ad743ecfe16b13df3 1161 Gene3D G3DSA:1.10.150.280 787 894 5.1E-10 T 29-03-2018 CHH28_RS18530 7c4d073dfe35137ad743ecfe16b13df3 1161 Gene3D G3DSA:3.20.20.140 4 263 1.1E-31 T 29-03-2018 CHH28_RS18530 7c4d073dfe35137ad743ecfe16b13df3 1161 Gene3D G3DSA:2.40.50.140 978 1076 1.9E-15 T 29-03-2018 CHH28_RS18530 7c4d073dfe35137ad743ecfe16b13df3 1161 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 293 735 7.9E-171 T 29-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS18530 7c4d073dfe35137ad743ecfe16b13df3 1161 Pfam PF14579 Helix-hairpin-helix motif 810 892 4.7E-25 T 29-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS18530 7c4d073dfe35137ad743ecfe16b13df3 1161 SUPERFAMILY SSF89550 5 262 1.37E-13 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CHH28_RS09805 0df1b725843dcb6aa01bd9947803c5f1 223 SUPERFAMILY SSF53254 6 189 1.84E-42 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CHH28_RS09805 0df1b725843dcb6aa01bd9947803c5f1 223 Gene3D G3DSA:3.40.50.1240 1 212 3.6E-40 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CHH28_RS09805 0df1b725843dcb6aa01bd9947803c5f1 223 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 190 2.7E-41 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CHH28_RS09805 0df1b725843dcb6aa01bd9947803c5f1 223 PIRSF PIRSF000709 2 185 1.9E-8 T 29-03-2018 CHH28_RS09805 0df1b725843dcb6aa01bd9947803c5f1 223 SMART SM00855 6 159 2.1E-13 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 SUPERFAMILY SSF52096 741 1023 7.11E-27 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 1339 1346 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 SUPERFAMILY SSF52096 58 275 2.23E-34 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 SUPERFAMILY SSF56059 1135 1385 1.06E-59 T 29-03-2018 CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 Gene3D G3DSA:3.40.50.20 1050 1181 5.6E-34 T 29-03-2018 CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 Pfam PF00289 Biotin carboxylase, N-terminal domain 1051 1162 2.2E-29 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 Pfam PF02785 Biotin carboxylase C-terminal domain 1387 1497 4.1E-24 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 Gene3D G3DSA:3.30.1490.20 1182 1254 3.7E-18 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 Pfam PF01039 Carboxyl transferase domain 113 208 3.1E-13 T 29-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 Gene3D G3DSA:2.40.50.100 1556 1628 2.1E-4 T 29-03-2018 CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 Gene3D G3DSA:3.30.470.20 1256 1501 6.2E-78 T 29-03-2018 CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 194 203 7.8E-5 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 150 163 7.8E-5 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 Gene3D G3DSA:3.90.226.10 768 947 2.0E-17 T 29-03-2018 CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 Gene3D G3DSA:3.90.226.10 40 280 2.7E-25 T 29-03-2018 CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 SUPERFAMILY SSF51246 1382 1501 1.88E-27 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 SUPERFAMILY SSF52440 1038 1165 2.59E-32 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 SUPERFAMILY SSF51230 1537 1624 7.99E-9 T 29-03-2018 IPR011053 Single hybrid motif CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 SMART SM00878 1387 1498 3.5E-30 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CHH28_RS15750 c2f7b477b9b5568626ab6cad95542f74 1631 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 1168 1374 6.7E-62 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CHH28_RS14615 bef2ac9a5ed3d32502bea3880b29a225 344 Pfam PF06812 ImpA, N-terminal, type VI secretion system 3 122 3.0E-30 T 29-03-2018 IPR010657 ImpA, N-terminal CHH28_RS14615 bef2ac9a5ed3d32502bea3880b29a225 344 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 1 337 4.3E-73 T 29-03-2018 IPR017740 Type VI secretion system-associated, ImpA CHH28_RS12505 dd6064ad08b1b3ddd1bbc2c6541797cf 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 377 1.5E-97 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CHH28_RS12505 dd6064ad08b1b3ddd1bbc2c6541797cf 388 Gene3D G3DSA:1.20.5.100 194 211 7.2E-14 T 29-03-2018 CHH28_RS12505 dd6064ad08b1b3ddd1bbc2c6541797cf 388 SUPERFAMILY SSF51735 1 194 1.04E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS12505 dd6064ad08b1b3ddd1bbc2c6541797cf 388 Gene3D G3DSA:1.10.1040.10 212 287 2.9E-27 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CHH28_RS12505 dd6064ad08b1b3ddd1bbc2c6541797cf 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 170 3.4E-31 T 29-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CHH28_RS12505 dd6064ad08b1b3ddd1bbc2c6541797cf 388 PIRSF PIRSF000124 1 388 1.1E-136 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CHH28_RS12505 dd6064ad08b1b3ddd1bbc2c6541797cf 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 3.0E-26 T 29-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CHH28_RS12505 dd6064ad08b1b3ddd1bbc2c6541797cf 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 368 1.0E-7 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CHH28_RS12505 dd6064ad08b1b3ddd1bbc2c6541797cf 388 PIRSF PIRSF500134 1 365 7.3E-121 T 29-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CHH28_RS12505 dd6064ad08b1b3ddd1bbc2c6541797cf 388 PIRSF PIRSF500134 338 388 1.9 T 29-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CHH28_RS12505 dd6064ad08b1b3ddd1bbc2c6541797cf 388 Gene3D G3DSA:3.40.50.720 1 193 1.1E-46 T 29-03-2018 CHH28_RS12505 dd6064ad08b1b3ddd1bbc2c6541797cf 388 SUPERFAMILY SSF48179 191 287 5.78E-30 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CHH28_RS12505 dd6064ad08b1b3ddd1bbc2c6541797cf 388 SMART SM00984 300 387 5.9E-12 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CHH28_RS12505 dd6064ad08b1b3ddd1bbc2c6541797cf 388 SUPERFAMILY SSF52413 283 388 1.7E-27 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CHH28_RS12505 dd6064ad08b1b3ddd1bbc2c6541797cf 388 Gene3D G3DSA:3.40.50.720 288 388 1.3E-16 T 29-03-2018 CHH28_RS06205 6dec329d6c4acf51dabb181afc9fa201 112 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 81 105 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CHH28_RS06205 6dec329d6c4acf51dabb181afc9fa201 112 SUPERFAMILY SSF57716 78 110 5.23E-9 T 29-03-2018 CHH28_RS06205 6dec329d6c4acf51dabb181afc9fa201 112 SUPERFAMILY SSF109635 4 75 1.57E-6 T 29-03-2018 CHH28_RS06205 6dec329d6c4acf51dabb181afc9fa201 112 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 78 110 1.2E-10 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CHH28_RS09215 164195bdbf51470f8e4adbd4f5e341e1 262 SUPERFAMILY SSF53850 30 249 2.17E-36 T 29-03-2018 CHH28_RS09215 164195bdbf51470f8e4adbd4f5e341e1 262 Gene3D G3DSA:3.40.190.10 122 252 8.8E-8 T 29-03-2018 CHH28_RS09215 164195bdbf51470f8e4adbd4f5e341e1 262 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 248 5.9E-20 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS09215 164195bdbf51470f8e4adbd4f5e341e1 262 Gene3D G3DSA:3.40.190.10 25 121 3.7E-11 T 29-03-2018 CHH28_RS05385 29cebdb94b85a4feae8946b06b30ba2b 178 Gene3D G3DSA:3.40.980.10 4 173 7.7E-35 T 29-03-2018 IPR001453 MoaB/Mog domain CHH28_RS05385 29cebdb94b85a4feae8946b06b30ba2b 178 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 10 169 3.9E-80 T 29-03-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 CHH28_RS05385 29cebdb94b85a4feae8946b06b30ba2b 178 SMART SM00852 15 159 5.2E-32 T 29-03-2018 IPR001453 MoaB/Mog domain CHH28_RS05385 29cebdb94b85a4feae8946b06b30ba2b 178 Pfam PF00994 Probable molybdopterin binding domain 15 156 1.2E-36 T 29-03-2018 IPR001453 MoaB/Mog domain CHH28_RS05385 29cebdb94b85a4feae8946b06b30ba2b 178 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 13 152 1.0E-35 T 29-03-2018 IPR001453 MoaB/Mog domain CHH28_RS05385 29cebdb94b85a4feae8946b06b30ba2b 178 SUPERFAMILY SSF53218 11 169 8.38E-46 T 29-03-2018 IPR001453 MoaB/Mog domain CHH28_RS05385 29cebdb94b85a4feae8946b06b30ba2b 178 PIRSF PIRSF006443 1 166 2.1E-65 T 29-03-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 CHH28_RS19155 7e6417ce67f56dd54b35a32b08fc31ae 165 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 4.9E-67 T 29-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CHH28_RS19155 7e6417ce67f56dd54b35a32b08fc31ae 165 Pfam PF03477 ATP cone domain 50 136 2.0E-15 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CHH28_RS19155 7e6417ce67f56dd54b35a32b08fc31ae 165 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 155 86.951 T 29-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CHH28_RS06035 5ed554fb1b504063faf9f42c3c4cefd1 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 29-03-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06035 5ed554fb1b504063faf9f42c3c4cefd1 91 Gene3D G3DSA:3.30.860.10 1 91 4.1E-39 T 29-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06035 5ed554fb1b504063faf9f42c3c4cefd1 91 PIRSF PIRSF002144 1 91 2.0E-31 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06035 5ed554fb1b504063faf9f42c3c4cefd1 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 9.6E-45 T 29-03-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CHH28_RS06035 5ed554fb1b504063faf9f42c3c4cefd1 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.0E-23 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06035 5ed554fb1b504063faf9f42c3c4cefd1 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.0E-23 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06035 5ed554fb1b504063faf9f42c3c4cefd1 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.0E-23 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06035 5ed554fb1b504063faf9f42c3c4cefd1 91 SUPERFAMILY SSF54570 3 83 1.83E-35 T 29-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06035 5ed554fb1b504063faf9f42c3c4cefd1 91 Pfam PF00203 Ribosomal protein S19 3 83 1.1E-36 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06035 5ed554fb1b504063faf9f42c3c4cefd1 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.947 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS14445 8fd1b777c73655c084cca377afe6d71b 292 SMART SM00729 16 236 6.1E-24 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CHH28_RS14445 8fd1b777c73655c084cca377afe6d71b 292 Gene3D G3DSA:3.20.20.70 8 263 2.7E-27 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS14445 8fd1b777c73655c084cca377afe6d71b 292 SUPERFAMILY SSF102114 3 248 1.96E-33 T 29-03-2018 CHH28_RS14445 8fd1b777c73655c084cca377afe6d71b 292 Pfam PF04055 Radical SAM superfamily 21 181 3.3E-16 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CHH28_RS04030 840845ecfeae26700492c7a5875a1578 434 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 328 351 - T 29-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CHH28_RS04030 840845ecfeae26700492c7a5875a1578 434 PRINTS PR00173 Glutamate-aspartate symporter signature 104 129 1.0E-47 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04030 840845ecfeae26700492c7a5875a1578 434 PRINTS PR00173 Glutamate-aspartate symporter signature 24 44 1.0E-47 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04030 840845ecfeae26700492c7a5875a1578 434 PRINTS PR00173 Glutamate-aspartate symporter signature 325 351 1.0E-47 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04030 840845ecfeae26700492c7a5875a1578 434 PRINTS PR00173 Glutamate-aspartate symporter signature 387 407 1.0E-47 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04030 840845ecfeae26700492c7a5875a1578 434 PRINTS PR00173 Glutamate-aspartate symporter signature 254 273 1.0E-47 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04030 840845ecfeae26700492c7a5875a1578 434 PRINTS PR00173 Glutamate-aspartate symporter signature 176 198 1.0E-47 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04030 840845ecfeae26700492c7a5875a1578 434 PRINTS PR00173 Glutamate-aspartate symporter signature 224 243 1.0E-47 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04030 840845ecfeae26700492c7a5875a1578 434 PRINTS PR00173 Glutamate-aspartate symporter signature 360 379 1.0E-47 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04030 840845ecfeae26700492c7a5875a1578 434 SUPERFAMILY SSF118215 26 433 5.89E-109 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04030 840845ecfeae26700492c7a5875a1578 434 Pfam PF00375 Sodium:dicarboxylate symporter family 26 433 1.8E-122 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04030 840845ecfeae26700492c7a5875a1578 434 Gene3D G3DSA:1.10.3860.10 17 434 2.4E-122 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS02410 ac7e7fd0c45724bf66acbf2ec328690b 927 SMART SM00560 306 453 0.0066 T 29-03-2018 IPR006558 LamG-like jellyroll fold CHH28_RS02410 ac7e7fd0c45724bf66acbf2ec328690b 927 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 290 453 1.4E-14 T 29-03-2018 CHH28_RS02410 ac7e7fd0c45724bf66acbf2ec328690b 927 SUPERFAMILY SSF49899 237 461 7.63E-22 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CHH28_RS02410 ac7e7fd0c45724bf66acbf2ec328690b 927 Gene3D G3DSA:2.60.120.200 228 469 4.6E-27 T 29-03-2018 CHH28_RS14290 e762912c192d99c1ae3dc0acb2e10dde 72 SMART SM00316 4 72 2.1E-5 T 29-03-2018 IPR022967 RNA-binding domain, S1 CHH28_RS14290 e762912c192d99c1ae3dc0acb2e10dde 72 SUPERFAMILY SSF50249 1 70 8.57E-29 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS14290 e762912c192d99c1ae3dc0acb2e10dde 72 Gene3D G3DSA:2.40.50.140 1 72 4.1E-36 T 29-03-2018 CHH28_RS14290 e762912c192d99c1ae3dc0acb2e10dde 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 8.4E-28 T 29-03-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CHH28_RS14290 e762912c192d99c1ae3dc0acb2e10dde 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.4E-38 T 29-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CHH28_RS14290 e762912c192d99c1ae3dc0acb2e10dde 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.946 T 29-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CHH28_RS05345 b38eb593dc6ae33c6d55d3cb72c91f13 276 SUPERFAMILY SSF48179 162 267 1.87E-34 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CHH28_RS05345 b38eb593dc6ae33c6d55d3cb72c91f13 276 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 5.2E-21 T 29-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CHH28_RS05345 b38eb593dc6ae33c6d55d3cb72c91f13 276 PIRSF PIRSF000193 1 269 9.8E-80 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CHH28_RS05345 b38eb593dc6ae33c6d55d3cb72c91f13 276 SUPERFAMILY SSF51735 4 159 2.28E-33 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS05345 b38eb593dc6ae33c6d55d3cb72c91f13 276 Gene3D G3DSA:1.10.3730.10 164 271 4.1E-37 T 29-03-2018 CHH28_RS05345 b38eb593dc6ae33c6d55d3cb72c91f13 276 Gene3D G3DSA:3.40.50.720 1 163 1.2E-29 T 29-03-2018 CHH28_RS05345 b38eb593dc6ae33c6d55d3cb72c91f13 276 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 266 26.528 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CHH28_RS05345 b38eb593dc6ae33c6d55d3cb72c91f13 276 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 266 5.9E-80 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CHH28_RS05345 b38eb593dc6ae33c6d55d3cb72c91f13 276 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CHH28_RS05345 b38eb593dc6ae33c6d55d3cb72c91f13 276 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 266 5.1E-34 T 29-03-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CHH28_RS15255 46f1524dd0bd09c9c9e205ccf9469d89 215 SMART SM00421 149 206 9.2E-23 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS15255 46f1524dd0bd09c9c9e205ccf9469d89 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 8.1E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS15255 46f1524dd0bd09c9c9e205ccf9469d89 215 Pfam PF00072 Response regulator receiver domain 7 118 1.5E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS15255 46f1524dd0bd09c9c9e205ccf9469d89 215 SUPERFAMILY SSF52172 4 135 1.2E-38 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS15255 46f1524dd0bd09c9c9e205ccf9469d89 215 Gene3D G3DSA:3.40.50.2300 1 125 3.4E-36 T 29-03-2018 CHH28_RS15255 46f1524dd0bd09c9c9e205ccf9469d89 215 SMART SM00448 5 118 4.2E-33 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS15255 46f1524dd0bd09c9c9e205ccf9469d89 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.4E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS15255 46f1524dd0bd09c9c9e205ccf9469d89 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.4E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS15255 46f1524dd0bd09c9c9e205ccf9469d89 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.4E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS15255 46f1524dd0bd09c9c9e205ccf9469d89 215 Gene3D G3DSA:1.10.10.10 126 215 1.1E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS15255 46f1524dd0bd09c9c9e205ccf9469d89 215 SUPERFAMILY SSF46894 144 211 3.23E-21 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CHH28_RS09360 94d6e4b133f253a1afb34763d0b1e33a 444 Gene3D G3DSA:3.30.70.1230 228 429 2.3E-22 T 29-03-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 CHH28_RS09360 94d6e4b133f253a1afb34763d0b1e33a 444 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 243 418 5.8E-12 T 29-03-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 CHH28_RS09360 94d6e4b133f253a1afb34763d0b1e33a 444 SUPERFAMILY SSF55073 241 402 1.18E-25 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS09360 94d6e4b133f253a1afb34763d0b1e33a 444 SMART SM00044 212 402 0.0013 T 29-03-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 CHH28_RS12920 dca996ff3662ebd64425f07233cd3684 356 Gene3D G3DSA:3.40.50.1820 14 344 1.1E-36 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS12920 dca996ff3662ebd64425f07233cd3684 356 SUPERFAMILY SSF53474 18 345 1.61E-41 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS12920 dca996ff3662ebd64425f07233cd3684 356 Pfam PF12146 Serine aminopeptidase, S33 68 296 4.9E-11 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CHH28_RS15610 48e688817041968268f14151be20a250 290 Pfam PF02629 CoA binding domain 6 99 2.0E-32 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CHH28_RS15610 48e688817041968268f14151be20a250 290 PIRSF PIRSF001553 1 289 7.1E-134 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CHH28_RS15610 48e688817041968268f14151be20a250 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 287 3.0E-146 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CHH28_RS15610 48e688817041968268f14151be20a250 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 29-03-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CHH28_RS15610 48e688817041968268f14151be20a250 290 SUPERFAMILY SSF51735 1 122 4.47E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS15610 48e688817041968268f14151be20a250 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 42.964 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CHH28_RS15610 48e688817041968268f14151be20a250 290 Pfam PF00549 CoA-ligase 151 270 5.9E-21 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CHH28_RS15610 48e688817041968268f14151be20a250 290 SUPERFAMILY SSF52210 123 286 1.16E-56 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CHH28_RS15610 48e688817041968268f14151be20a250 290 Gene3D G3DSA:3.40.50.720 1 119 5.3E-46 T 29-03-2018 CHH28_RS15610 48e688817041968268f14151be20a250 290 SMART SM00881 4 100 1.2E-37 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CHH28_RS15610 48e688817041968268f14151be20a250 290 Gene3D G3DSA:3.40.50.261 120 289 1.8E-56 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CHH28_RS15610 48e688817041968268f14151be20a250 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.5E-38 T 29-03-2018 CHH28_RS15610 48e688817041968268f14151be20a250 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.5E-38 T 29-03-2018 CHH28_RS15610 48e688817041968268f14151be20a250 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.5E-38 T 29-03-2018 CHH28_RS15610 48e688817041968268f14151be20a250 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.5E-38 T 29-03-2018 CHH28_RS15610 48e688817041968268f14151be20a250 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 29-03-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CHH28_RS15505 87024f7fb315fd49fb6988cd94360bb3 253 Pfam PF16537 Type II secretion system protein B 185 242 2.4E-13 T 29-03-2018 IPR032389 Type II secretion system protein B CHH28_RS12135 a1e4de3bed1b3d3d0d00331163ad19e2 184 Gene3D G3DSA:1.10.286.10 2 50 1.9E-19 T 29-03-2018 CHH28_RS12135 a1e4de3bed1b3d3d0d00331163ad19e2 184 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 109 119 - T 29-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CHH28_RS12135 a1e4de3bed1b3d3d0d00331163ad19e2 184 Pfam PF01227 GTP cyclohydrolase I 7 181 1.6E-74 T 29-03-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CHH28_RS12135 a1e4de3bed1b3d3d0d00331163ad19e2 184 SUPERFAMILY SSF55620 3 182 1.63E-78 T 29-03-2018 CHH28_RS12135 a1e4de3bed1b3d3d0d00331163ad19e2 184 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 7 182 5.2E-75 T 29-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CHH28_RS12135 a1e4de3bed1b3d3d0d00331163ad19e2 184 Gene3D G3DSA:3.30.1130.10 52 184 1.1E-62 T 29-03-2018 CHH28_RS12135 a1e4de3bed1b3d3d0d00331163ad19e2 184 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 182 36.234 T 29-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CHH28_RS12135 a1e4de3bed1b3d3d0d00331163ad19e2 184 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 61 77 - T 29-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CHH28_RS00405 3c3838d4145117a701da34d355288c92 494 TIGRFAM TIGR02645 ARCH_P_rylase: putative thymidine phosphorylase 2 478 3.4E-173 T 29-03-2018 IPR013466 Thymidine phosphorylase/AMP phosphorylase GO:0016763 CHH28_RS00405 3c3838d4145117a701da34d355288c92 494 Gene3D G3DSA:3.40.1030.10 151 414 1.6E-54 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CHH28_RS00405 3c3838d4145117a701da34d355288c92 494 SUPERFAMILY SSF54680 406 480 1.57E-13 T 29-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CHH28_RS00405 3c3838d4145117a701da34d355288c92 494 SMART SM00941 419 486 2.6E-15 T 29-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CHH28_RS00405 3c3838d4145117a701da34d355288c92 494 Gene3D G3DSA:1.20.970.10 85 149 2.5E-10 T 29-03-2018 CHH28_RS00405 3c3838d4145117a701da34d355288c92 494 SUPERFAMILY SSF47648 86 152 1.96E-12 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CHH28_RS00405 3c3838d4145117a701da34d355288c92 494 Pfam PF00591 Glycosyl transferase family, a/b domain 157 386 4.7E-9 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CHH28_RS00405 3c3838d4145117a701da34d355288c92 494 Pfam PF02885 Glycosyl transferase family, helical bundle domain 89 149 9.6E-8 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CHH28_RS00405 3c3838d4145117a701da34d355288c92 494 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 419 477 3.1E-8 T 29-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CHH28_RS00405 3c3838d4145117a701da34d355288c92 494 PIRSF PIRSF000478 83 492 1.3E-117 T 29-03-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CHH28_RS00405 3c3838d4145117a701da34d355288c92 494 Hamap MF_00703 Putative thymidine phosphorylase. 1 490 56.376 T 29-03-2018 IPR028579 Putative thymidine phosphorylase KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 CHH28_RS00405 3c3838d4145117a701da34d355288c92 494 SUPERFAMILY SSF52418 151 407 2.88E-66 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CHH28_RS00405 3c3838d4145117a701da34d355288c92 494 Gene3D G3DSA:3.90.1170.30 415 491 5.1E-14 T 29-03-2018 CHH28_RS00405 3c3838d4145117a701da34d355288c92 494 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 192 207 - T 29-03-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CHH28_RS01275 6c5aeacc78b1bfb3b9f90cb38f4c665a 293 SMART SM00228 216 283 0.0012 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS01275 6c5aeacc78b1bfb3b9f90cb38f4c665a 293 Pfam PF11356 Type II secretion system protein C 31 163 2.2E-32 T 29-03-2018 IPR024961 Type II secretion system protein C, N-terminal CHH28_RS01275 6c5aeacc78b1bfb3b9f90cb38f4c665a 293 SUPERFAMILY SSF50156 229 289 3.68E-11 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS01275 6c5aeacc78b1bfb3b9f90cb38f4c665a 293 Gene3D G3DSA:2.30.42.10 96 293 4.9E-10 T 29-03-2018 CHH28_RS02755 47a875521a630c12bd5ebd30611c8636 67 Pfam PF01469 Pentapeptide repeats (8 copies) 18 51 6.6E-8 T 29-03-2018 IPR002989 Mycobacterial pentapeptide repeat CHH28_RS02425 db27bcc35bf50d131898e80c48116481 178 SUPERFAMILY SSF52218 1 176 3.81E-36 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS02425 db27bcc35bf50d131898e80c48116481 178 Pfam PF03358 NADPH-dependent FMN reductase 1 124 3.1E-26 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CHH28_RS02425 db27bcc35bf50d131898e80c48116481 178 Gene3D G3DSA:3.40.50.360 1 177 1.6E-26 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS14250 85c6cee3017bb4ccb9a1d8df2663a999 213 Gene3D G3DSA:1.10.3890.10 4 206 2.0E-75 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CHH28_RS14250 85c6cee3017bb4ccb9a1d8df2663a999 213 Pfam PF04356 Protein of unknown function (DUF489) 7 198 2.6E-69 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CHH28_RS14250 85c6cee3017bb4ccb9a1d8df2663a999 213 SUPERFAMILY SSF101322 4 207 5.75E-64 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CHH28_RS14250 85c6cee3017bb4ccb9a1d8df2663a999 213 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 20 204 1.0E-27 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CHH28_RS14250 85c6cee3017bb4ccb9a1d8df2663a999 213 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 206 33.652 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CHH28_RS02995 6bfae2d993c58b9ac3ff1c416ce69a08 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 29-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CHH28_RS02995 6bfae2d993c58b9ac3ff1c416ce69a08 224 SUPERFAMILY SSF102712 107 194 3.27E-7 T 29-03-2018 CHH28_RS02995 6bfae2d993c58b9ac3ff1c416ce69a08 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 4.9E-75 T 29-03-2018 IPR001405 RadC protein CHH28_RS02995 6bfae2d993c58b9ac3ff1c416ce69a08 224 SUPERFAMILY SSF47781 18 90 7.78E-10 T 29-03-2018 IPR010994 RuvA domain 2-like CHH28_RS02995 6bfae2d993c58b9ac3ff1c416ce69a08 224 Pfam PF04002 RadC-like JAB domain 104 222 3.4E-43 T 29-03-2018 IPR025657 RadC-like JAB domain CHH28_RS02995 6bfae2d993c58b9ac3ff1c416ce69a08 224 Gene3D G3DSA:3.40.140.10 99 224 7.0E-46 T 29-03-2018 CHH28_RS14000 3f8657438fc0061223f8eefdb894db90 283 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.575 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CHH28_RS14000 3f8657438fc0061223f8eefdb894db90 283 Gene3D G3DSA:3.40.50.10860 12 140 3.8E-49 T 29-03-2018 CHH28_RS14000 3f8657438fc0061223f8eefdb894db90 283 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 1.0E-66 T 29-03-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CHH28_RS14000 3f8657438fc0061223f8eefdb894db90 283 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 29-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CHH28_RS14000 3f8657438fc0061223f8eefdb894db90 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 6.4E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CHH28_RS14000 3f8657438fc0061223f8eefdb894db90 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 6.4E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CHH28_RS14000 3f8657438fc0061223f8eefdb894db90 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 6.4E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CHH28_RS14000 3f8657438fc0061223f8eefdb894db90 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 6.4E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CHH28_RS14000 3f8657438fc0061223f8eefdb894db90 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 6.4E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CHH28_RS14000 3f8657438fc0061223f8eefdb894db90 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 6.4E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CHH28_RS14000 3f8657438fc0061223f8eefdb894db90 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 6.4E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CHH28_RS14000 3f8657438fc0061223f8eefdb894db90 283 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 1.0E-39 T 29-03-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CHH28_RS14000 3f8657438fc0061223f8eefdb894db90 283 SUPERFAMILY SSF53223 1 122 1.73E-40 T 29-03-2018 CHH28_RS14000 3f8657438fc0061223f8eefdb894db90 283 Gene3D G3DSA:3.40.50.720 141 264 2.1E-38 T 29-03-2018 CHH28_RS14000 3f8657438fc0061223f8eefdb894db90 283 SUPERFAMILY SSF51735 123 279 5.21E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS07370 83d426cc2752ba973824d397630f523b 218 Pfam PF01381 Helix-turn-helix 20 62 1.5E-7 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CHH28_RS07370 83d426cc2752ba973824d397630f523b 218 Gene3D G3DSA:2.10.109.10 91 217 5.2E-26 T 29-03-2018 CHH28_RS07370 83d426cc2752ba973824d397630f523b 218 SUPERFAMILY SSF47413 20 67 1.69E-8 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CHH28_RS07370 83d426cc2752ba973824d397630f523b 218 Gene3D G3DSA:1.10.260.40 18 76 7.5E-10 T 29-03-2018 CHH28_RS07370 83d426cc2752ba973824d397630f523b 218 SUPERFAMILY SSF51306 84 215 3.14E-26 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CHH28_RS07370 83d426cc2752ba973824d397630f523b 218 ProSitePatterns PS00501 Signal peptidases I serine active site. 135 142 - T 29-03-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 CHH28_RS07370 83d426cc2752ba973824d397630f523b 218 Pfam PF00717 Peptidase S24-like 132 198 7.6E-12 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CHH28_RS05930 8a3df950713d17209d3055f2b1b4256a 177 Pfam PF05036 Sporulation related domain 98 169 2.9E-19 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CHH28_RS05930 8a3df950713d17209d3055f2b1b4256a 177 Gene3D G3DSA:3.30.70.1070 93 171 1.5E-15 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CHH28_RS05930 8a3df950713d17209d3055f2b1b4256a 177 SUPERFAMILY SSF110997 97 170 7.72E-20 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CHH28_RS12500 be449a1b46ebc9d82fb46de92bda18c9 485 PIRSF PIRSF000977 1 484 2.0E-198 T 29-03-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 CHH28_RS12500 be449a1b46ebc9d82fb46de92bda18c9 485 Pfam PF00929 Exonuclease 5 186 8.5E-24 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CHH28_RS12500 be449a1b46ebc9d82fb46de92bda18c9 485 Pfam PF08411 Exonuclease C-terminal 205 478 7.6E-97 T 29-03-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 CHH28_RS12500 be449a1b46ebc9d82fb46de92bda18c9 485 Gene3D G3DSA:3.30.420.10 2 194 1.4E-27 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS12500 be449a1b46ebc9d82fb46de92bda18c9 485 SMART SM00479 3 196 9.6E-4 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CHH28_RS12500 be449a1b46ebc9d82fb46de92bda18c9 485 SUPERFAMILY SSF53098 4 480 2.57E-124 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS15955 e03578297e970e57630c995010ae7a1e 536 SMART SM00283 274 535 9.5E-60 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS15955 e03578297e970e57630c995010ae7a1e 536 Gene3D G3DSA:3.30.450.20 85 183 8.2E-5 T 29-03-2018 CHH28_RS15955 e03578297e970e57630c995010ae7a1e 536 Gene3D G3DSA:1.10.287.500 206 299 0.0011 T 29-03-2018 CHH28_RS15955 e03578297e970e57630c995010ae7a1e 536 Pfam PF00672 HAMP domain 206 253 4.2E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS15955 e03578297e970e57630c995010ae7a1e 536 SMART SM00304 206 259 2.1E-5 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS15955 e03578297e970e57630c995010ae7a1e 536 Gene3D G3DSA:1.10.287.950 300 507 6.5E-45 T 29-03-2018 CHH28_RS15955 e03578297e970e57630c995010ae7a1e 536 SUPERFAMILY SSF58104 227 536 5.1E-67 T 29-03-2018 CHH28_RS15955 e03578297e970e57630c995010ae7a1e 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 399 6.9E-20 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS15955 e03578297e970e57630c995010ae7a1e 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 6.9E-20 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS15955 e03578297e970e57630c995010ae7a1e 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 501 1.6E-38 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS12335 f997c9e0d4650760f8eb2990cfed4a78 274 SUPERFAMILY SSF51735 4 266 1.51E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS12335 f997c9e0d4650760f8eb2990cfed4a78 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.6E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS12335 f997c9e0d4650760f8eb2990cfed4a78 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.6E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS12335 f997c9e0d4650760f8eb2990cfed4a78 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.6E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS12335 f997c9e0d4650760f8eb2990cfed4a78 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.6E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS12335 f997c9e0d4650760f8eb2990cfed4a78 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.6E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS12335 f997c9e0d4650760f8eb2990cfed4a78 274 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CHH28_RS12335 f997c9e0d4650760f8eb2990cfed4a78 274 Gene3D G3DSA:3.40.50.720 4 266 2.7E-58 T 29-03-2018 CHH28_RS12335 f997c9e0d4650760f8eb2990cfed4a78 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.2E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS12335 f997c9e0d4650760f8eb2990cfed4a78 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.2E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS12335 f997c9e0d4650760f8eb2990cfed4a78 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 1.2E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS12335 f997c9e0d4650760f8eb2990cfed4a78 274 Pfam PF00106 short chain dehydrogenase 5 185 2.1E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS15920 a56eeec9299f65354144f7aea1b0d61d 412 Pfam PF02222 ATP-grasp domain 131 308 2.8E-54 T 29-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CHH28_RS15920 a56eeec9299f65354144f7aea1b0d61d 412 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 16 405 51.78 T 29-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 CHH28_RS15920 a56eeec9299f65354144f7aea1b0d61d 412 Gene3D G3DSA:3.30.1490.20 137 204 3.3E-22 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CHH28_RS15920 a56eeec9299f65354144f7aea1b0d61d 412 SUPERFAMILY SSF51246 334 404 7.53E-16 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CHH28_RS15920 a56eeec9299f65354144f7aea1b0d61d 412 SUPERFAMILY SSF56059 121 328 3.01E-57 T 29-03-2018 CHH28_RS15920 a56eeec9299f65354144f7aea1b0d61d 412 Gene3D G3DSA:3.40.50.20 22 120 1.7E-21 T 29-03-2018 CHH28_RS15920 a56eeec9299f65354144f7aea1b0d61d 412 Pfam PF01370 NAD dependent epimerase/dehydratase family 27 89 3.3E-5 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CHH28_RS15920 a56eeec9299f65354144f7aea1b0d61d 412 Gene3D G3DSA:3.30.470.20 205 404 4.6E-37 T 29-03-2018 CHH28_RS15920 a56eeec9299f65354144f7aea1b0d61d 412 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 22 404 2.6E-182 T 29-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 CHH28_RS15920 a56eeec9299f65354144f7aea1b0d61d 412 SUPERFAMILY SSF52440 12 120 2.73E-32 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CHH28_RS01335 befa4a3bec64436bf6f965c8c03487ad 427 Pfam PF09312 SurA N-terminal domain 28 143 1.2E-39 T 29-03-2018 IPR015391 SurA N-terminal CHH28_RS01335 befa4a3bec64436bf6f965c8c03487ad 427 Gene3D G3DSA:3.10.50.40 168 281 1.2E-26 T 29-03-2018 CHH28_RS01335 befa4a3bec64436bf6f965c8c03487ad 427 SUPERFAMILY SSF54534 174 277 2.75E-28 T 29-03-2018 CHH28_RS01335 befa4a3bec64436bf6f965c8c03487ad 427 Pfam PF00639 PPIC-type PPIASE domain 179 273 1.5E-21 T 29-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CHH28_RS01335 befa4a3bec64436bf6f965c8c03487ad 427 Gene3D G3DSA:3.10.50.40 282 385 2.0E-32 T 29-03-2018 CHH28_RS01335 befa4a3bec64436bf6f965c8c03487ad 427 SUPERFAMILY SSF54534 284 384 1.05E-31 T 29-03-2018 CHH28_RS01335 befa4a3bec64436bf6f965c8c03487ad 427 SUPERFAMILY SSF109998 28 202 1.57E-39 T 29-03-2018 IPR027304 Trigger factor/SurA domain CHH28_RS01335 befa4a3bec64436bf6f965c8c03487ad 427 Hamap MF_01183 Chaperone SurA [surA]. 12 427 33.048 T 29-03-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 CHH28_RS01335 befa4a3bec64436bf6f965c8c03487ad 427 Gene3D G3DSA:1.10.4030.10 24 149 3.3E-23 T 29-03-2018 CHH28_RS01335 befa4a3bec64436bf6f965c8c03487ad 427 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 320 341 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CHH28_RS01335 befa4a3bec64436bf6f965c8c03487ad 427 Pfam PF13616 PPIC-type PPIASE domain 282 382 2.2E-29 T 29-03-2018 CHH28_RS14450 48014a56eb51d89466568e18f8d105c5 182 Gene3D G3DSA:3.10.540.10 10 90 4.4E-33 T 29-03-2018 CHH28_RS14450 48014a56eb51d89466568e18f8d105c5 182 Pfam PF06938 Protein of unknown function (DUF1285) 40 174 3.2E-44 T 29-03-2018 IPR010707 Protein of unknown function DUF1285 CHH28_RS14450 48014a56eb51d89466568e18f8d105c5 182 Gene3D G3DSA:2.30.270.10 91 166 3.3E-20 T 29-03-2018 IPR023361 Protein of unknown function DUF1285, beta-roll domain CHH28_RS14450 48014a56eb51d89466568e18f8d105c5 182 PIRSF PIRSF029557 2 182 3.1E-49 T 29-03-2018 IPR010707 Protein of unknown function DUF1285 CHH28_RS03280 0ba3f42510cda31551cb899b622a6cd2 218 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 189 1.4E-24 T 29-03-2018 CHH28_RS03280 0ba3f42510cda31551cb899b622a6cd2 218 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 200 8.7E-41 T 29-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CHH28_RS03280 0ba3f42510cda31551cb899b622a6cd2 218 Gene3D G3DSA:1.20.1440.100 16 84 1.5E-28 T 29-03-2018 CHH28_RS03280 0ba3f42510cda31551cb899b622a6cd2 218 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 1.1E-36 T 29-03-2018 CHH28_RS03280 0ba3f42510cda31551cb899b622a6cd2 218 SUPERFAMILY SSF56784 3 213 6.11E-35 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS03280 0ba3f42510cda31551cb899b622a6cd2 218 Gene3D G3DSA:3.40.50.1000 85 209 5.1E-11 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS03660 15ae4465d127b27b6eb8c707ae9f4e0d 488 Gene3D G3DSA:3.40.1670.10 323 459 4.2E-53 T 29-03-2018 CHH28_RS03660 15ae4465d127b27b6eb8c707ae9f4e0d 488 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 9.1E-178 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CHH28_RS03660 15ae4465d127b27b6eb8c707ae9f4e0d 488 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 2.1E-176 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CHH28_RS03660 15ae4465d127b27b6eb8c707ae9f4e0d 488 SUPERFAMILY SSF143968 323 487 5.75E-69 T 29-03-2018 CHH28_RS03660 15ae4465d127b27b6eb8c707ae9f4e0d 488 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 71.932 T 29-03-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CHH28_RS03660 15ae4465d127b27b6eb8c707ae9f4e0d 488 SUPERFAMILY SSF50475 3 322 1.02E-128 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CHH28_RS03660 15ae4465d127b27b6eb8c707ae9f4e0d 488 Gene3D G3DSA:1.20.5.570 460 487 6.3E-19 T 29-03-2018 CHH28_RS13145 1614d429f96f10d8aa811522ddc7c3a9 349 Gene3D G3DSA:2.60.40.420 89 219 4.4E-45 T 29-03-2018 IPR008972 Cupredoxin CHH28_RS13145 1614d429f96f10d8aa811522ddc7c3a9 349 SUPERFAMILY SSF49503 85 277 8.32E-48 T 29-03-2018 IPR008972 Cupredoxin CHH28_RS13145 1614d429f96f10d8aa811522ddc7c3a9 349 PRINTS PR01166 Cytochrome c oxidase subunit II signature 197 214 9.7E-37 T 29-03-2018 CHH28_RS13145 1614d429f96f10d8aa811522ddc7c3a9 349 PRINTS PR01166 Cytochrome c oxidase subunit II signature 88 107 9.7E-37 T 29-03-2018 CHH28_RS13145 1614d429f96f10d8aa811522ddc7c3a9 349 PRINTS PR01166 Cytochrome c oxidase subunit II signature 159 179 9.7E-37 T 29-03-2018 CHH28_RS13145 1614d429f96f10d8aa811522ddc7c3a9 349 PRINTS PR01166 Cytochrome c oxidase subunit II signature 54 66 9.7E-37 T 29-03-2018 CHH28_RS13145 1614d429f96f10d8aa811522ddc7c3a9 349 PRINTS PR01166 Cytochrome c oxidase subunit II signature 66 86 9.7E-37 T 29-03-2018 CHH28_RS13145 1614d429f96f10d8aa811522ddc7c3a9 349 PRINTS PR01166 Cytochrome c oxidase subunit II signature 179 196 9.7E-37 T 29-03-2018 CHH28_RS13145 1614d429f96f10d8aa811522ddc7c3a9 349 PRINTS PR01166 Cytochrome c oxidase subunit II signature 135 156 9.7E-37 T 29-03-2018 CHH28_RS13145 1614d429f96f10d8aa811522ddc7c3a9 349 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 247 323 8.9E-11 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS13145 1614d429f96f10d8aa811522ddc7c3a9 349 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 95 215 2.3E-36 T 29-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13145 1614d429f96f10d8aa811522ddc7c3a9 349 Gene3D G3DSA:1.10.760.10 220 331 6.0E-20 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS13145 1614d429f96f10d8aa811522ddc7c3a9 349 SUPERFAMILY SSF46626 230 338 6.77E-24 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS13145 1614d429f96f10d8aa811522ddc7c3a9 349 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 160 208 - T 29-03-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13145 1614d429f96f10d8aa811522ddc7c3a9 349 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 6 224 3.0E-57 T 29-03-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13145 1614d429f96f10d8aa811522ddc7c3a9 349 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 4 77 3.0E-14 T 29-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13145 1614d429f96f10d8aa811522ddc7c3a9 349 Gene3D G3DSA:1.10.287.90 1 87 1.1E-24 T 29-03-2018 CHH28_RS13145 1614d429f96f10d8aa811522ddc7c3a9 349 SUPERFAMILY SSF81464 2 85 2.29E-23 T 29-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS15430 5b2b11da143f34819480f408e7f44041 157 SUPERFAMILY SSF52788 1 153 1.13E-48 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CHH28_RS15430 5b2b11da143f34819480f408e7f44041 157 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 150 7.1E-40 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CHH28_RS15430 5b2b11da143f34819480f408e7f44041 157 Gene3D G3DSA:3.40.50.2300 1 157 6.1E-50 T 29-03-2018 CHH28_RS15430 5b2b11da143f34819480f408e7f44041 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 81 96 1.6E-23 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CHH28_RS15430 5b2b11da143f34819480f408e7f44041 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 47 63 1.6E-23 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CHH28_RS15430 5b2b11da143f34819480f408e7f44041 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 124 139 1.6E-23 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CHH28_RS15430 5b2b11da143f34819480f408e7f44041 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 1.6E-23 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CHH28_RS15430 5b2b11da143f34819480f408e7f44041 157 SMART SM00226 2 152 1.2E-49 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CHH28_RS01305 8b417a025a8c22f095d4cbc423af7a46 217 Pfam PF03006 Haemolysin-III related 6 205 2.1E-47 T 29-03-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 CHH28_RS01305 8b417a025a8c22f095d4cbc423af7a46 217 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 9 210 4.1E-62 T 29-03-2018 IPR005744 Hly-III GO:0016021|GO:0019835 CHH28_RS17810 92a1908b815f2a69043f91ea947bd952 171 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 152 45.882 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CHH28_RS17810 92a1908b815f2a69043f91ea947bd952 171 SUPERFAMILY SSF53098 2 156 2.53E-54 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS17810 92a1908b815f2a69043f91ea947bd952 171 Gene3D G3DSA:3.30.420.10 1 158 1.7E-52 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS17810 92a1908b815f2a69043f91ea947bd952 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 82 98 8.3E-40 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CHH28_RS17810 92a1908b815f2a69043f91ea947bd952 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 8.3E-40 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CHH28_RS17810 92a1908b815f2a69043f91ea947bd952 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 137 149 8.3E-40 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CHH28_RS17810 92a1908b815f2a69043f91ea947bd952 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 8.3E-40 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CHH28_RS17810 92a1908b815f2a69043f91ea947bd952 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 8.3E-40 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CHH28_RS17810 92a1908b815f2a69043f91ea947bd952 171 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 149 2.8E-61 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CHH28_RS17810 92a1908b815f2a69043f91ea947bd952 171 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 2.6E-65 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CHH28_RS17810 92a1908b815f2a69043f91ea947bd952 171 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 146 - T 29-03-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 CHH28_RS04615 81293dd65c148ce15ff1845e513ceb90 457 Gene3D G3DSA:1.10.3720.10 151 447 5.6E-33 T 29-03-2018 CHH28_RS04615 81293dd65c148ce15ff1845e513ceb90 457 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 244 445 2.6E-16 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS04615 81293dd65c148ce15ff1845e513ceb90 457 SUPERFAMILY SSF161098 178 444 2.88E-31 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS04615 81293dd65c148ce15ff1845e513ceb90 457 Pfam PF12501 Phosphate ATP-binding cassette transporter 8 175 1.2E-32 T 29-03-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 CHH28_RS04615 81293dd65c148ce15ff1845e513ceb90 457 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 159 452 1.2E-87 T 29-03-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CHH28_RS14120 789e9cc0940020d6b9c7b8ab8e1ce69e 169 Pfam PF13466 STAS domain 17 99 1.4E-7 T 29-03-2018 IPR002645 STAS domain CHH28_RS14120 789e9cc0940020d6b9c7b8ab8e1ce69e 169 PIRSF PIRSF029548 1 160 4.6E-47 T 29-03-2018 IPR014557 Uncharacterised conserved protein UCP029548, STAS-type CHH28_RS14120 789e9cc0940020d6b9c7b8ab8e1ce69e 169 SUPERFAMILY SSF52091 5 104 1.96E-15 T 29-03-2018 IPR002645 STAS domain CHH28_RS14120 789e9cc0940020d6b9c7b8ab8e1ce69e 169 Gene3D G3DSA:3.30.750.24 2 117 5.8E-14 T 29-03-2018 IPR002645 STAS domain CHH28_RS18915 38dfcbe75cd7726ab3aba9f72d34d324 993 SUPERFAMILY SSF64518 852 993 1.07E-19 T 29-03-2018 CHH28_RS18915 38dfcbe75cd7726ab3aba9f72d34d324 993 SUPERFAMILY SSF64518 688 783 1.07E-19 T 29-03-2018 CHH28_RS18915 38dfcbe75cd7726ab3aba9f72d34d324 993 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 6.6E-21 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CHH28_RS18915 38dfcbe75cd7726ab3aba9f72d34d324 993 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 6.6E-21 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CHH28_RS18915 38dfcbe75cd7726ab3aba9f72d34d324 993 PRINTS PR01005 Flagellar hook-associated protein signature 421 438 6.6E-21 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CHH28_RS18915 38dfcbe75cd7726ab3aba9f72d34d324 993 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 6.6E-21 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CHH28_RS18915 38dfcbe75cd7726ab3aba9f72d34d324 993 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 6.6E-21 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CHH28_RS18915 38dfcbe75cd7726ab3aba9f72d34d324 993 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 6.6E-21 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CHH28_RS18915 38dfcbe75cd7726ab3aba9f72d34d324 993 SUPERFAMILY SSF64518 165 457 3.79E-19 T 29-03-2018 CHH28_RS18915 38dfcbe75cd7726ab3aba9f72d34d324 993 Pfam PF00460 Flagella basal body rod protein 5 34 8.5E-6 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CHH28_RS18915 38dfcbe75cd7726ab3aba9f72d34d324 993 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 334 6.1E-77 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CHH28_RS18915 38dfcbe75cd7726ab3aba9f72d34d324 993 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 946 990 2.0E-7 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CHH28_RS10320 acf7b1dde525f51895a99ca7afe0acde 310 Gene3D G3DSA:3.40.190.10 85 186 2.1E-15 T 29-03-2018 CHH28_RS10320 acf7b1dde525f51895a99ca7afe0acde 310 Pfam PF03466 LysR substrate binding domain 90 294 4.2E-36 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS10320 acf7b1dde525f51895a99ca7afe0acde 310 SUPERFAMILY SSF53850 90 295 3.1E-38 T 29-03-2018 CHH28_RS10320 acf7b1dde525f51895a99ca7afe0acde 310 Gene3D G3DSA:3.40.190.10 187 264 6.1E-12 T 29-03-2018 CHH28_RS10320 acf7b1dde525f51895a99ca7afe0acde 310 SUPERFAMILY SSF46785 5 89 1.02E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS10320 acf7b1dde525f51895a99ca7afe0acde 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.1E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS10320 acf7b1dde525f51895a99ca7afe0acde 310 Gene3D G3DSA:1.10.10.10 4 84 1.6E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS07340 4d248691115ed5d0b6730d6f1503b327 147 Pfam PF09335 SNARE associated Golgi protein 34 141 3.6E-13 T 29-03-2018 IPR032816 SNARE associated Golgi protein CHH28_RS03115 be66ec69e9c2d28a5097387d2c966c76 356 Gene3D G3DSA:3.40.1090.10 50 250 0.0067 T 29-03-2018 CHH28_RS03115 be66ec69e9c2d28a5097387d2c966c76 356 SUPERFAMILY SSF52151 155 335 5.23E-13 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CHH28_RS03115 be66ec69e9c2d28a5097387d2c966c76 356 SUPERFAMILY SSF52151 34 100 5.23E-13 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CHH28_RS12820 e99701b7c0ca6c7bc38ba047ae48c5eb 477 Pfam PF01235 Sodium:alanine symporter family 59 457 3.2E-158 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS12820 e99701b7c0ca6c7bc38ba047ae48c5eb 477 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 94 109 - T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS12820 e99701b7c0ca6c7bc38ba047ae48c5eb 477 PRINTS PR00175 Sodium/alanine symporter signature 310 328 8.2E-58 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS12820 e99701b7c0ca6c7bc38ba047ae48c5eb 477 PRINTS PR00175 Sodium/alanine symporter signature 185 203 8.2E-58 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS12820 e99701b7c0ca6c7bc38ba047ae48c5eb 477 PRINTS PR00175 Sodium/alanine symporter signature 356 378 8.2E-58 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS12820 e99701b7c0ca6c7bc38ba047ae48c5eb 477 PRINTS PR00175 Sodium/alanine symporter signature 94 116 8.2E-58 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS12820 e99701b7c0ca6c7bc38ba047ae48c5eb 477 PRINTS PR00175 Sodium/alanine symporter signature 213 232 8.2E-58 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS12820 e99701b7c0ca6c7bc38ba047ae48c5eb 477 PRINTS PR00175 Sodium/alanine symporter signature 416 436 8.2E-58 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS12820 e99701b7c0ca6c7bc38ba047ae48c5eb 477 TIGRFAM TIGR00835 agcS: amino acid carrier protein 20 447 2.5E-158 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS15165 ff9c4e87fe697a69a886723075c5763c 489 SUPERFAMILY SSF52949 1 179 1.53E-24 T 29-03-2018 CHH28_RS15165 ff9c4e87fe697a69a886723075c5763c 489 PRINTS PR00481 Cytosol aminopeptidase signature 278 299 8.3E-52 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CHH28_RS15165 ff9c4e87fe697a69a886723075c5763c 489 PRINTS PR00481 Cytosol aminopeptidase signature 337 357 8.3E-52 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CHH28_RS15165 ff9c4e87fe697a69a886723075c5763c 489 PRINTS PR00481 Cytosol aminopeptidase signature 256 273 8.3E-52 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CHH28_RS15165 ff9c4e87fe697a69a886723075c5763c 489 PRINTS PR00481 Cytosol aminopeptidase signature 315 336 8.3E-52 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CHH28_RS15165 ff9c4e87fe697a69a886723075c5763c 489 PRINTS PR00481 Cytosol aminopeptidase signature 366 381 8.3E-52 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CHH28_RS15165 ff9c4e87fe697a69a886723075c5763c 489 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 145 7.9E-16 T 29-03-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CHH28_RS15165 ff9c4e87fe697a69a886723075c5763c 489 SUPERFAMILY SSF53187 174 487 5.34E-116 T 29-03-2018 CHH28_RS15165 ff9c4e87fe697a69a886723075c5763c 489 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 341 348 - T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CHH28_RS15165 ff9c4e87fe697a69a886723075c5763c 489 Gene3D G3DSA:3.40.220.10 1 159 7.6E-22 T 29-03-2018 CHH28_RS15165 ff9c4e87fe697a69a886723075c5763c 489 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 489 34.489 T 29-03-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 CHH28_RS15165 ff9c4e87fe697a69a886723075c5763c 489 Gene3D G3DSA:3.40.630.10 166 489 2.7E-128 T 29-03-2018 CHH28_RS15165 ff9c4e87fe697a69a886723075c5763c 489 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 180 482 1.7E-117 T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CHH28_RS08535 6c200e3962a5fa35d67dab97cd67c8f9 261 Gene3D G3DSA:2.40.30.10 6 116 6.6E-9 T 29-03-2018 CHH28_RS08535 6c200e3962a5fa35d67dab97cd67c8f9 261 SUPERFAMILY SSF52343 122 251 1.03E-29 T 29-03-2018 CHH28_RS08535 6c200e3962a5fa35d67dab97cd67c8f9 261 SUPERFAMILY SSF63380 15 118 5.38E-9 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CHH28_RS08535 6c200e3962a5fa35d67dab97cd67c8f9 261 Pfam PF00175 Oxidoreductase NAD-binding domain 129 229 1.8E-17 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CHH28_RS08535 6c200e3962a5fa35d67dab97cd67c8f9 261 Gene3D G3DSA:3.40.50.80 120 253 5.4E-23 T 29-03-2018 CHH28_RS08535 6c200e3962a5fa35d67dab97cd67c8f9 261 PRINTS PR00410 Phenol hydroxylase reductase family signature 218 226 2.5E-8 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CHH28_RS08535 6c200e3962a5fa35d67dab97cd67c8f9 261 PRINTS PR00410 Phenol hydroxylase reductase family signature 43 55 2.5E-8 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CHH28_RS08535 6c200e3962a5fa35d67dab97cd67c8f9 261 PRINTS PR00410 Phenol hydroxylase reductase family signature 128 147 2.5E-8 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CHH28_RS19225 ddaae5312db666ae25fe892d92176c8c 287 SMART SM00849 14 204 2.0E-26 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS19225 ddaae5312db666ae25fe892d92176c8c 287 SUPERFAMILY SSF56281 9 287 9.04E-51 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS19225 ddaae5312db666ae25fe892d92176c8c 287 Gene3D G3DSA:3.60.15.10 2 287 1.2E-52 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS19225 ddaae5312db666ae25fe892d92176c8c 287 Pfam PF00753 Metallo-beta-lactamase superfamily 12 204 1.7E-25 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS04810 cb3fed4c9c84b1ac98d8a0eab99f25f6 249 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS04810 cb3fed4c9c84b1ac98d8a0eab99f25f6 249 Pfam PF00005 ABC transporter 21 149 4.3E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS04810 cb3fed4c9c84b1ac98d8a0eab99f25f6 249 SMART SM00382 30 198 9.8E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS04810 cb3fed4c9c84b1ac98d8a0eab99f25f6 249 SUPERFAMILY SSF52540 5 220 1.1E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS04810 cb3fed4c9c84b1ac98d8a0eab99f25f6 249 Gene3D G3DSA:3.40.50.300 4 232 2.9E-50 T 29-03-2018 CHH28_RS05870 50b99cd341c26510a6cbae2516006c41 417 Gene3D G3DSA:3.30.70.270 255 417 2.8E-45 T 29-03-2018 CHH28_RS05870 50b99cd341c26510a6cbae2516006c41 417 Pfam PF00072 Response regulator receiver domain 5 105 5.2E-8 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS05870 50b99cd341c26510a6cbae2516006c41 417 Pfam PF00072 Response regulator receiver domain 127 236 3.1E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS05870 50b99cd341c26510a6cbae2516006c41 417 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 252 413 2.2E-41 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS05870 50b99cd341c26510a6cbae2516006c41 417 Gene3D G3DSA:3.40.50.2300 2 119 9.7E-15 T 29-03-2018 CHH28_RS05870 50b99cd341c26510a6cbae2516006c41 417 SUPERFAMILY SSF52172 125 274 3.56E-35 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS05870 50b99cd341c26510a6cbae2516006c41 417 SUPERFAMILY SSF52172 4 119 1.71E-13 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS05870 50b99cd341c26510a6cbae2516006c41 417 SUPERFAMILY SSF55073 261 413 2.9E-38 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS05870 50b99cd341c26510a6cbae2516006c41 417 Gene3D G3DSA:3.40.50.2300 120 254 1.1E-31 T 29-03-2018 CHH28_RS05870 50b99cd341c26510a6cbae2516006c41 417 SMART SM00267 245 415 2.7E-43 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS05870 50b99cd341c26510a6cbae2516006c41 417 Pfam PF00990 Diguanylate cyclase, GGDEF domain 256 410 3.0E-35 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS05870 50b99cd341c26510a6cbae2516006c41 417 SMART SM00448 2 113 0.0052 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS05870 50b99cd341c26510a6cbae2516006c41 417 SMART SM00448 125 239 6.9E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS08360 0d3229f06b334e9fc6f0de9ca4ad4305 398 SUPERFAMILY SSF58104 132 398 4.45E-60 T 29-03-2018 CHH28_RS08360 0d3229f06b334e9fc6f0de9ca4ad4305 398 SMART SM00283 165 398 8.0E-60 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS08360 0d3229f06b334e9fc6f0de9ca4ad4305 398 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 226 384 1.5E-33 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS08360 0d3229f06b334e9fc6f0de9ca4ad4305 398 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 88 108 4.6E-28 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS08360 0d3229f06b334e9fc6f0de9ca4ad4305 398 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 285 314 4.6E-28 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS08360 0d3229f06b334e9fc6f0de9ca4ad4305 398 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 179 208 4.6E-28 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS08360 0d3229f06b334e9fc6f0de9ca4ad4305 398 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 256 283 4.6E-28 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS08360 0d3229f06b334e9fc6f0de9ca4ad4305 398 Pfam PF00672 HAMP domain 113 160 2.1E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS08360 0d3229f06b334e9fc6f0de9ca4ad4305 398 Gene3D G3DSA:1.10.287.950 2 218 5.5E-15 T 29-03-2018 CHH28_RS08360 0d3229f06b334e9fc6f0de9ca4ad4305 398 SMART SM00304 112 164 2.3E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS08360 0d3229f06b334e9fc6f0de9ca4ad4305 398 Gene3D G3DSA:1.10.287.950 219 384 4.5E-44 T 29-03-2018 CHH28_RS03700 edb27bd7c41d064480751269783d0a89 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.6E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS03700 edb27bd7c41d064480751269783d0a89 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.6E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS03700 edb27bd7c41d064480751269783d0a89 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.6E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS03700 edb27bd7c41d064480751269783d0a89 298 SUPERFAMILY SSF53850 96 297 2.33E-37 T 29-03-2018 CHH28_RS03700 edb27bd7c41d064480751269783d0a89 298 SUPERFAMILY SSF46785 4 118 2.08E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS03700 edb27bd7c41d064480751269783d0a89 298 Gene3D G3DSA:3.40.190.10 99 184 3.6E-16 T 29-03-2018 CHH28_RS03700 edb27bd7c41d064480751269783d0a89 298 Pfam PF03466 LysR substrate binding domain 94 292 7.0E-32 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS03700 edb27bd7c41d064480751269783d0a89 298 Gene3D G3DSA:1.10.10.10 2 93 6.2E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS03700 edb27bd7c41d064480751269783d0a89 298 Gene3D G3DSA:3.40.190.10 185 262 9.1E-7 T 29-03-2018 CHH28_RS03700 edb27bd7c41d064480751269783d0a89 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 4.9E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS03050 779cdca15d349d38ef8ea404ffdb5479 224 SUPERFAMILY SSF81342 10 192 2.2E-34 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CHH28_RS03050 779cdca15d349d38ef8ea404ffdb5479 224 Gene3D G3DSA:1.20.950.20 6 210 7.2E-33 T 29-03-2018 CHH28_RS03050 779cdca15d349d38ef8ea404ffdb5479 224 Pfam PF01292 Prokaryotic cytochrome b561 15 189 4.4E-22 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CHH28_RS04745 21445666857c65fc62522bf9168471b7 54 Gene3D G3DSA:2.20.28.10 1 54 5.1E-28 T 29-03-2018 CHH28_RS04745 21445666857c65fc62522bf9168471b7 54 PIRSF PIRSF000071 1 54 7.3E-26 T 29-03-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 CHH28_RS04745 21445666857c65fc62522bf9168471b7 54 Pfam PF00301 Rubredoxin 3 49 1.1E-23 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 CHH28_RS04745 21445666857c65fc62522bf9168471b7 54 SUPERFAMILY SSF57802 1 53 3.37E-23 T 29-03-2018 CHH28_RS04745 21445666857c65fc62522bf9168471b7 54 PRINTS PR00163 Rubredoxin signature 33 49 1.8E-9 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 CHH28_RS04745 21445666857c65fc62522bf9168471b7 54 PRINTS PR00163 Rubredoxin signature 3 19 1.8E-9 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 CHH28_RS04515 732efe08ea65ebe0777d04908df5e43c 484 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 467 4.5E-112 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CHH28_RS04515 732efe08ea65ebe0777d04908df5e43c 484 Pfam PF02386 Cation transport protein 37 478 2.6E-86 T 29-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CHH28_RS04515 732efe08ea65ebe0777d04908df5e43c 484 PIRSF PIRSF006247 1 484 9.2E-178 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CHH28_RS12280 a147d81c6e3261a35a1358dd772a2a14 302 Gene3D G3DSA:3.40.50.620 2 268 1.0E-41 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS12280 a147d81c6e3261a35a1358dd772a2a14 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.492 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CHH28_RS12280 a147d81c6e3261a35a1358dd772a2a14 302 SUPERFAMILY SSF52402 3 210 3.72E-76 T 29-03-2018 CHH28_RS12280 a147d81c6e3261a35a1358dd772a2a14 302 PIRSF PIRSF002936 1 302 1.9E-159 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CHH28_RS12280 a147d81c6e3261a35a1358dd772a2a14 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 4.0E-66 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CHH28_RS12280 a147d81c6e3261a35a1358dd772a2a14 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 3.8E-163 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CHH28_RS19555 b94e4e7b595503016651fa37a16976f1 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 3.2E-57 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS19555 b94e4e7b595503016651fa37a16976f1 155 SUPERFAMILY SSF75217 1 154 7.85E-51 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CHH28_RS19555 b94e4e7b595503016651fa37a16976f1 155 Gene3D G3DSA:3.40.1280.10 1 155 9.3E-54 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CHH28_RS19555 b94e4e7b595503016651fa37a16976f1 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.084 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS19555 b94e4e7b595503016651fa37a16976f1 155 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 8.7E-51 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS19555 b94e4e7b595503016651fa37a16976f1 155 PIRSF PIRSF004505 1 155 2.2E-45 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS00345 82ffd3140e89f35f40e7bd95f1b12abe 311 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 309 3.4E-116 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CHH28_RS00345 82ffd3140e89f35f40e7bd95f1b12abe 311 SUPERFAMILY SSF81799 116 215 2.88E-36 T 29-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CHH28_RS00345 82ffd3140e89f35f40e7bd95f1b12abe 311 PIRSF PIRSF004486 3 311 4.4E-102 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CHH28_RS00345 82ffd3140e89f35f40e7bd95f1b12abe 311 SUPERFAMILY SSF53335 215 310 9.5E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS00345 82ffd3140e89f35f40e7bd95f1b12abe 311 SUPERFAMILY SSF53335 8 115 9.5E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS00345 82ffd3140e89f35f40e7bd95f1b12abe 311 Gene3D G3DSA:1.10.150.170 114 217 1.3E-38 T 29-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CHH28_RS00345 82ffd3140e89f35f40e7bd95f1b12abe 311 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 8 310 38.595 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CHH28_RS00345 82ffd3140e89f35f40e7bd95f1b12abe 311 Pfam PF01795 MraW methylase family 6 309 6.2E-115 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CHH28_RS07005 d5c775aa58aa0709f280e14804276ecf 155 SUPERFAMILY SSF55729 1 150 1.74E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS07005 d5c775aa58aa0709f280e14804276ecf 155 Gene3D G3DSA:3.40.630.30 1 155 5.0E-29 T 29-03-2018 CHH28_RS07005 d5c775aa58aa0709f280e14804276ecf 155 Pfam PF00583 Acetyltransferase (GNAT) family 40 129 1.7E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS13075 3a9a40bc922a537d830e38673411af3d 302 SUPERFAMILY SSF55073 151 300 5.73E-46 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS13075 3a9a40bc922a537d830e38673411af3d 302 Gene3D G3DSA:3.30.70.270 150 302 2.8E-55 T 29-03-2018 CHH28_RS13075 3a9a40bc922a537d830e38673411af3d 302 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 142 300 1.1E-48 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS13075 3a9a40bc922a537d830e38673411af3d 302 SUPERFAMILY SSF52172 16 152 4.55E-39 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS13075 3a9a40bc922a537d830e38673411af3d 302 SMART SM00267 135 302 1.4E-59 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS13075 3a9a40bc922a537d830e38673411af3d 302 Gene3D G3DSA:3.40.50.2300 14 149 1.5E-36 T 29-03-2018 CHH28_RS13075 3a9a40bc922a537d830e38673411af3d 302 SMART SM00448 17 129 4.1E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13075 3a9a40bc922a537d830e38673411af3d 302 Pfam PF00990 Diguanylate cyclase, GGDEF domain 146 298 1.2E-45 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS13075 3a9a40bc922a537d830e38673411af3d 302 Pfam PF00072 Response regulator receiver domain 19 129 7.2E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS03420 dba0feb66a8ed09c893404c8ffd1e9da 446 SUPERFAMILY SSF158472 165 218 1.7E-6 T 29-03-2018 CHH28_RS03420 dba0feb66a8ed09c893404c8ffd1e9da 446 Pfam PF00672 HAMP domain 165 217 2.5E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS03420 dba0feb66a8ed09c893404c8ffd1e9da 446 SUPERFAMILY SSF55874 276 442 4.19E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03420 dba0feb66a8ed09c893404c8ffd1e9da 446 SMART SM00388 221 286 1.6E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS03420 dba0feb66a8ed09c893404c8ffd1e9da 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 443 1.9E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03420 dba0feb66a8ed09c893404c8ffd1e9da 446 Gene3D G3DSA:3.30.565.10 293 446 1.5E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03420 dba0feb66a8ed09c893404c8ffd1e9da 446 SMART SM00387 333 444 5.1E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03420 dba0feb66a8ed09c893404c8ffd1e9da 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 398 5.5E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS03420 dba0feb66a8ed09c893404c8ffd1e9da 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 423 5.5E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS03420 dba0feb66a8ed09c893404c8ffd1e9da 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 384 5.5E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS03420 dba0feb66a8ed09c893404c8ffd1e9da 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 441 5.5E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS03420 dba0feb66a8ed09c893404c8ffd1e9da 446 SUPERFAMILY SSF47384 207 285 1.02E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS03420 dba0feb66a8ed09c893404c8ffd1e9da 446 SMART SM00304 165 220 2.9E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS03420 dba0feb66a8ed09c893404c8ffd1e9da 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 285 2.3E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS03420 dba0feb66a8ed09c893404c8ffd1e9da 446 Gene3D G3DSA:1.10.287.130 211 282 4.0E-10 T 29-03-2018 CHH28_RS15425 0e9f6352c74860b05d3001e9e670bd80 334 Gene3D G3DSA:3.90.78.10 222 331 7.7E-37 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS15425 0e9f6352c74860b05d3001e9e670bd80 334 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 211 330 2.5E-31 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS15425 0e9f6352c74860b05d3001e9e670bd80 334 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 11 328 3.3E-65 T 29-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS15425 0e9f6352c74860b05d3001e9e670bd80 334 SUPERFAMILY SSF56194 206 331 3.92E-43 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS15425 0e9f6352c74860b05d3001e9e670bd80 334 Pfam PF01565 FAD binding domain 22 150 3.9E-17 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CHH28_RS15425 0e9f6352c74860b05d3001e9e670bd80 334 Gene3D G3DSA:3.30.465.10 73 221 9.9E-40 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CHH28_RS15425 0e9f6352c74860b05d3001e9e670bd80 334 SUPERFAMILY SSF56176 10 197 3.36E-36 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CHH28_RS15425 0e9f6352c74860b05d3001e9e670bd80 334 Gene3D G3DSA:3.30.43.10 9 69 8.3E-12 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CHH28_RS15425 0e9f6352c74860b05d3001e9e670bd80 334 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 334 67.882 T 29-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS01060 fbe397f4536365f4f4e443cdbc1bc315 262 Gene3D G3DSA:3.40.50.20 77 240 3.4E-4 T 29-03-2018 CHH28_RS01060 fbe397f4536365f4f4e443cdbc1bc315 262 Pfam PF02625 XdhC and CoxI family 3 53 1.4E-12 T 29-03-2018 IPR003777 XdhC- CoxI CHH28_RS01060 fbe397f4536365f4f4e443cdbc1bc315 262 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 3 223 2.1E-71 T 29-03-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC CHH28_RS01060 fbe397f4536365f4f4e443cdbc1bc315 262 Pfam PF13478 XdhC Rossmann domain 83 222 4.9E-35 T 29-03-2018 IPR027051 XdhC Rossmann domain CHH28_RS10550 6d5c75268c1bb5657605173831c7ccac 122 Pfam PF03203 MerC mercury resistance protein 10 118 2.7E-19 T 29-03-2018 IPR004891 MerC mercury resistance protein CHH28_RS06010 46544ef09d623f1c841ce0954c842d03 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.9E-18 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06010 46544ef09d623f1c841ce0954c842d03 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.9E-18 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06010 46544ef09d623f1c841ce0954c842d03 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.9E-18 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06010 46544ef09d623f1c841ce0954c842d03 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.848 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06010 46544ef09d623f1c841ce0954c842d03 103 Gene3D G3DSA:3.30.70.600 3 102 1.2E-35 T 29-03-2018 IPR027486 Ribosomal protein S10 domain CHH28_RS06010 46544ef09d623f1c841ce0954c842d03 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.5E-35 T 29-03-2018 IPR027486 Ribosomal protein S10 domain CHH28_RS06010 46544ef09d623f1c841ce0954c842d03 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 7.3E-46 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06010 46544ef09d623f1c841ce0954c842d03 103 SMART SM01403 7 101 1.9E-55 T 29-03-2018 IPR027486 Ribosomal protein S10 domain CHH28_RS06010 46544ef09d623f1c841ce0954c842d03 103 SUPERFAMILY SSF54999 5 101 9.29E-37 T 29-03-2018 IPR027486 Ribosomal protein S10 domain CHH28_RS06010 46544ef09d623f1c841ce0954c842d03 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 29-03-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 99.662 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 Gene3D G3DSA:3.30.70.870 393 488 1.6E-30 T 29-03-2018 CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 Gene3D G3DSA:3.30.70.240 611 688 5.3E-28 T 29-03-2018 CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 Gene3D G3DSA:2.40.30.10 272 392 1.3E-28 T 29-03-2018 CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 SUPERFAMILY SSF52540 3 278 1.57E-96 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 SUPERFAMILY SSF54980 401 478 4.68E-21 T 29-03-2018 IPR035647 EF-G domain III/V-like CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 Gene3D G3DSA:3.40.50.300 1 271 4.5E-53 T 29-03-2018 CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 SUPERFAMILY SSF50447 262 399 3.09E-30 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 278 8.2E-61 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 689 1.3E-290 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 Pfam PF14492 Elongation Factor G, domain II 401 474 3.3E-29 T 29-03-2018 CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 Pfam PF03764 Elongation factor G, domain IV 476 594 5.4E-43 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 SUPERFAMILY SSF54211 476 595 4.3E-40 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 SMART SM00889 477 595 4.7E-60 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 Pfam PF00679 Elongation factor G C-terminus 597 683 9.5E-28 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 4.8E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 4.8E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 4.8E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 4.8E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 Gene3D G3DSA:3.30.230.10 489 610 4.4E-40 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 SUPERFAMILY SSF54980 600 689 1.55E-28 T 29-03-2018 IPR035647 EF-G domain III/V-like CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 SMART SM00838 597 684 1.9E-44 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 7.4E-15 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CHH28_RS05940 4e95e0a3192091d8a3a754adc06c24a5 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 2.1E-25 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CHH28_RS00940 68e3409a91c87fffdb9d3655fb273917 514 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CHH28_RS00940 68e3409a91c87fffdb9d3655fb273917 514 SUPERFAMILY SSF51569 1 291 5.31E-100 T 29-03-2018 CHH28_RS00940 68e3409a91c87fffdb9d3655fb273917 514 Gene3D G3DSA:3.20.20.70 1 333 4.5E-109 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS00940 68e3409a91c87fffdb9d3655fb273917 514 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 510 43.633 T 29-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CHH28_RS00940 68e3409a91c87fffdb9d3655fb273917 514 SMART SM00917 370 501 1.1E-39 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CHH28_RS00940 68e3409a91c87fffdb9d3655fb273917 514 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 498 4.6E-219 T 29-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CHH28_RS00940 68e3409a91c87fffdb9d3655fb273917 514 Pfam PF08502 LeuA allosteric (dimerisation) domain 370 499 2.3E-33 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CHH28_RS00940 68e3409a91c87fffdb9d3655fb273917 514 Pfam PF00682 HMGL-like 5 273 1.5E-95 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CHH28_RS00940 68e3409a91c87fffdb9d3655fb273917 514 SUPERFAMILY SSF110921 392 500 1.57E-24 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CHH28_RS11265 83e5199bbedcbde8d3ab636d9f1f5379 287 SUPERFAMILY SSF51161 3 174 6.52E-55 T 29-03-2018 IPR011004 Trimeric LpxA-like CHH28_RS11265 83e5199bbedcbde8d3ab636d9f1f5379 287 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 7 167 1.7E-77 T 29-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CHH28_RS11265 83e5199bbedcbde8d3ab636d9f1f5379 287 Gene3D G3DSA:1.10.3130.10 2 62 1.9E-26 T 29-03-2018 CHH28_RS11265 83e5199bbedcbde8d3ab636d9f1f5379 287 Gene3D G3DSA:2.160.10.10 63 241 1.0E-38 T 29-03-2018 CHH28_RS11265 83e5199bbedcbde8d3ab636d9f1f5379 287 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CHH28_RS11265 83e5199bbedcbde8d3ab636d9f1f5379 287 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 73 109 3.3E-5 T 29-03-2018 IPR001451 Hexapeptide repeat CHH28_RS11265 83e5199bbedcbde8d3ab636d9f1f5379 287 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 153 8.8E-6 T 29-03-2018 IPR001451 Hexapeptide repeat CHH28_RS14875 a2febb8eb8b1e217769b14a556ec4164 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 74 2.1E-35 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CHH28_RS14875 a2febb8eb8b1e217769b14a556ec4164 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.7E-18 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CHH28_RS14875 a2febb8eb8b1e217769b14a556ec4164 77 SUPERFAMILY SSF47336 2 76 6.15E-24 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CHH28_RS14875 a2febb8eb8b1e217769b14a556ec4164 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.097 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CHH28_RS14875 a2febb8eb8b1e217769b14a556ec4164 77 Gene3D G3DSA:1.10.1200.10 1 77 1.6E-27 T 29-03-2018 CHH28_RS14875 a2febb8eb8b1e217769b14a556ec4164 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site CHH28_RS03685 0f1bb37a922dd51c691bcb8dff884625 416 Pfam PF13458 Periplasmic binding protein 24 369 1.2E-69 T 29-03-2018 IPR028081 Leucine-binding protein domain CHH28_RS03685 0f1bb37a922dd51c691bcb8dff884625 416 SUPERFAMILY SSF53822 24 376 1.98E-74 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CHH28_RS03685 0f1bb37a922dd51c691bcb8dff884625 416 Gene3D G3DSA:3.40.50.2300 15 150 5.0E-27 T 29-03-2018 CHH28_RS03685 0f1bb37a922dd51c691bcb8dff884625 416 Gene3D G3DSA:3.40.50.2300 151 332 2.6E-27 T 29-03-2018 CHH28_RS14145 54981bd6f8354ae05c43c17ce406d48b 311 Gene3D G3DSA:3.40.50.1820 37 308 1.8E-35 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS14145 54981bd6f8354ae05c43c17ce406d48b 311 Pfam PF00561 alpha/beta hydrolase fold 54 207 2.3E-18 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS14145 54981bd6f8354ae05c43c17ce406d48b 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 74 89 6.6E-7 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS14145 54981bd6f8354ae05c43c17ce406d48b 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 122 135 6.6E-7 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS14145 54981bd6f8354ae05c43c17ce406d48b 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 136 149 6.6E-7 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS14145 54981bd6f8354ae05c43c17ce406d48b 311 SUPERFAMILY SSF53474 52 306 2.92E-39 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS02840 8ab0b3a4bfff6e57263dcd1409a0a2c8 300 Pfam PF04116 Fatty acid hydroxylase superfamily 88 224 2.4E-27 T 29-03-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 CHH28_RS06480 4c6c55e1cc915e3c37c7bb0fa52c9dc3 127 Pfam PF12680 SnoaL-like domain 7 98 6.6E-8 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CHH28_RS06480 4c6c55e1cc915e3c37c7bb0fa52c9dc3 127 Gene3D G3DSA:3.10.450.50 2 127 1.5E-15 T 29-03-2018 CHH28_RS06480 4c6c55e1cc915e3c37c7bb0fa52c9dc3 127 SUPERFAMILY SSF54427 1 121 8.78E-31 T 29-03-2018 IPR032710 NTF2-like domain CHH28_RS11960 90b39a8a7f1f85e37357593754f6d593 606 Gene3D G3DSA:3.40.50.980 218 374 3.1E-37 T 29-03-2018 CHH28_RS11960 90b39a8a7f1f85e37357593754f6d593 606 Pfam PF00501 AMP-binding enzyme 49 472 3.5E-69 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CHH28_RS11960 90b39a8a7f1f85e37357593754f6d593 606 Gene3D G3DSA:3.30.300.30 468 603 6.5E-14 T 29-03-2018 CHH28_RS11960 90b39a8a7f1f85e37357593754f6d593 606 Pfam PF13193 AMP-binding enzyme C-terminal domain 481 558 1.4E-8 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CHH28_RS11960 90b39a8a7f1f85e37357593754f6d593 606 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 29-03-2018 IPR020845 AMP-binding, conserved site CHH28_RS11960 90b39a8a7f1f85e37357593754f6d593 606 Gene3D G3DSA:2.30.38.10 375 460 0.0015 T 29-03-2018 CHH28_RS11960 90b39a8a7f1f85e37357593754f6d593 606 SUPERFAMILY SSF56801 37 570 2.22E-106 T 29-03-2018 CHH28_RS11960 90b39a8a7f1f85e37357593754f6d593 606 Gene3D G3DSA:3.40.50.980 39 217 1.6E-39 T 29-03-2018 CHH28_RS14230 e74d2cf595409ea9f4fc5763c2f89132 147 Pfam PF05099 Tellurite resistance protein TerB 11 140 1.0E-36 T 29-03-2018 IPR007791 Co-chaperone DjlA, N-terminal CHH28_RS14230 e74d2cf595409ea9f4fc5763c2f89132 147 Gene3D G3DSA:1.10.3680.10 6 145 3.1E-26 T 29-03-2018 IPR029024 TerB-like CHH28_RS14230 e74d2cf595409ea9f4fc5763c2f89132 147 SUPERFAMILY SSF158682 4 144 1.7E-25 T 29-03-2018 CHH28_RS05250 1bcc7ec7bff3c58ffc6ade6981c1d594 502 SUPERFAMILY SSF53067 137 308 2.79E-46 T 29-03-2018 CHH28_RS05250 1bcc7ec7bff3c58ffc6ade6981c1d594 502 SUPERFAMILY SSF53067 12 132 2.07E-36 T 29-03-2018 CHH28_RS05250 1bcc7ec7bff3c58ffc6ade6981c1d594 502 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 12 306 5.8E-98 T 29-03-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 CHH28_RS05250 1bcc7ec7bff3c58ffc6ade6981c1d594 502 Pfam PF02541 Ppx/GppA phosphatase family 25 306 2.2E-79 T 29-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CHH28_RS05250 1bcc7ec7bff3c58ffc6ade6981c1d594 502 Gene3D G3DSA:3.30.420.40 1 124 7.1E-41 T 29-03-2018 CHH28_RS05250 1bcc7ec7bff3c58ffc6ade6981c1d594 502 Gene3D G3DSA:3.30.420.150 125 305 5.7E-42 T 29-03-2018 CHH28_RS05250 1bcc7ec7bff3c58ffc6ade6981c1d594 502 PIRSF PIRSF001267 2 501 2.8E-191 T 29-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 CHH28_RS05250 1bcc7ec7bff3c58ffc6ade6981c1d594 502 SUPERFAMILY SSF109604 313 500 1.04E-45 T 29-03-2018 CHH28_RS12535 f1e6a4da64b00864b0acd0590f1777c0 591 SUPERFAMILY SSF89000 300 461 3.81E-50 T 29-03-2018 CHH28_RS12535 f1e6a4da64b00864b0acd0590f1777c0 591 Gene3D G3DSA:3.20.20.70 1 287 1.3E-70 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS12535 f1e6a4da64b00864b0acd0590f1777c0 591 Gene3D G3DSA:2.40.50.100 522 591 9.7E-20 T 29-03-2018 CHH28_RS12535 f1e6a4da64b00864b0acd0590f1777c0 591 SUPERFAMILY SSF51230 515 590 2.09E-21 T 29-03-2018 IPR011053 Single hybrid motif CHH28_RS12535 f1e6a4da64b00864b0acd0590f1777c0 591 Pfam PF00364 Biotin-requiring enzyme 530 590 3.6E-18 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CHH28_RS12535 f1e6a4da64b00864b0acd0590f1777c0 591 SUPERFAMILY SSF51569 5 301 2.56E-87 T 29-03-2018 CHH28_RS12535 f1e6a4da64b00864b0acd0590f1777c0 591 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 10 587 5.3E-263 T 29-03-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 CHH28_RS12535 f1e6a4da64b00864b0acd0590f1777c0 591 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 547 564 - T 29-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CHH28_RS12535 f1e6a4da64b00864b0acd0590f1777c0 591 Pfam PF00682 HMGL-like 10 273 3.5E-58 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CHH28_RS12535 f1e6a4da64b00864b0acd0590f1777c0 591 Gene3D G3DSA:1.10.10.60 402 456 2.1E-11 T 29-03-2018 CHH28_RS12535 f1e6a4da64b00864b0acd0590f1777c0 591 Pfam PF02436 Conserved carboxylase domain 295 486 2.6E-57 T 29-03-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CHH28_RS13770 51bdf98891743c412a92d99045b5921e 470 Gene3D G3DSA:3.40.50.300 20 317 3.4E-57 T 29-03-2018 CHH28_RS13770 51bdf98891743c412a92d99045b5921e 470 Pfam PF00270 DEAD/DEAH box helicase 117 289 1.8E-46 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CHH28_RS13770 51bdf98891743c412a92d99045b5921e 470 Pfam PF00271 Helicase conserved C-terminal domain 327 435 3.4E-29 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS13770 51bdf98891743c412a92d99045b5921e 470 SUPERFAMILY SSF52540 167 454 1.3E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS13770 51bdf98891743c412a92d99045b5921e 470 Gene3D G3DSA:3.40.50.300 318 469 2.2E-45 T 29-03-2018 CHH28_RS13770 51bdf98891743c412a92d99045b5921e 470 SMART SM00490 354 435 6.2E-32 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS13770 51bdf98891743c412a92d99045b5921e 470 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 92 470 51.493 T 29-03-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 CHH28_RS13770 51bdf98891743c412a92d99045b5921e 470 SMART SM00487 112 318 7.9E-52 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CHH28_RS13770 51bdf98891743c412a92d99045b5921e 470 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 247 255 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CHH28_RS02005 efd8029ece56bf77b747f71ee7496410 477 SUPERFAMILY SSF53448 1 283 4.28E-71 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS02005 efd8029ece56bf77b747f71ee7496410 477 SUPERFAMILY SSF51182 182 476 3.92E-85 T 29-03-2018 IPR011051 RmlC-like cupin domain CHH28_RS02005 efd8029ece56bf77b747f71ee7496410 477 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1 476 1.1E-212 T 29-03-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 CHH28_RS02005 efd8029ece56bf77b747f71ee7496410 477 Pfam PF01050 Mannose-6-phosphate isomerase 322 472 1.7E-74 T 29-03-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 CHH28_RS02005 efd8029ece56bf77b747f71ee7496410 477 Pfam PF00483 Nucleotidyl transferase 3 288 4.4E-68 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CHH28_RS02005 efd8029ece56bf77b747f71ee7496410 477 Gene3D G3DSA:3.90.550.10 1 344 3.8E-96 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS02005 efd8029ece56bf77b747f71ee7496410 477 Gene3D G3DSA:2.60.120.10 345 455 6.4E-30 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS07805 ba86b53ad24bbb39736f67a6cede92bb 250 Pfam PF00156 Phosphoribosyl transferase domain 187 242 2.6E-9 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CHH28_RS07805 ba86b53ad24bbb39736f67a6cede92bb 250 Gene3D G3DSA:3.40.50.2020 37 248 7.6E-21 T 29-03-2018 CHH28_RS07805 ba86b53ad24bbb39736f67a6cede92bb 250 SUPERFAMILY SSF53271 63 243 4.97E-20 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CHH28_RS07195 a380da2d052a27a6a74a022445b8b1dd 207 Pfam PF03352 Methyladenine glycosylase 16 187 2.1E-71 T 29-03-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 CHH28_RS07195 a380da2d052a27a6a74a022445b8b1dd 207 Gene3D G3DSA:1.10.340.30 11 188 8.3E-76 T 29-03-2018 CHH28_RS07195 a380da2d052a27a6a74a022445b8b1dd 207 SUPERFAMILY SSF48150 12 188 2.04E-70 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CHH28_RS04100 c7393aff99f48f011640b588c39101f0 173 SUPERFAMILY SSF55729 16 146 8.92E-20 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS04100 c7393aff99f48f011640b588c39101f0 173 Pfam PF13673 Acetyltransferase (GNAT) domain 40 154 1.5E-10 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS04100 c7393aff99f48f011640b588c39101f0 173 Gene3D G3DSA:3.40.630.30 5 151 2.6E-20 T 29-03-2018 CHH28_RS15200 b27a8a39ed0ffc3275bbc86a0367f313 383 SMART SM00342 258 343 6.4E-15 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS15200 b27a8a39ed0ffc3275bbc86a0367f313 383 Pfam PF12833 Helix-turn-helix domain 264 344 8.1E-16 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS15200 b27a8a39ed0ffc3275bbc86a0367f313 383 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 296 339 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CHH28_RS15200 b27a8a39ed0ffc3275bbc86a0367f313 383 SUPERFAMILY SSF46689 295 347 1.03E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS15200 b27a8a39ed0ffc3275bbc86a0367f313 383 Gene3D G3DSA:3.90.1240.10 254 367 3.5E-15 T 29-03-2018 CHH28_RS07055 9d18ba043328fa1d97af625b44609f0a 271 Gene3D G3DSA:3.40.50.1820 21 255 7.1E-25 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS07055 9d18ba043328fa1d97af625b44609f0a 271 Pfam PF11187 Protein of unknown function (DUF2974) 76 166 1.0E-6 T 29-03-2018 IPR024499 Protein of unknown function DUF2974 CHH28_RS07055 9d18ba043328fa1d97af625b44609f0a 271 SUPERFAMILY SSF53474 28 239 8.39E-22 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS01850 58130534a7aa6fbe38dc652ff9628c98 329 PRINTS PR00990 Ribokinase signature 206 221 1.0E-6 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CHH28_RS01850 58130534a7aa6fbe38dc652ff9628c98 329 PRINTS PR00990 Ribokinase signature 56 75 1.0E-6 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CHH28_RS01850 58130534a7aa6fbe38dc652ff9628c98 329 PRINTS PR00990 Ribokinase signature 244 255 1.0E-6 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CHH28_RS01850 58130534a7aa6fbe38dc652ff9628c98 329 Gene3D G3DSA:3.40.1190.20 1 328 9.4E-66 T 29-03-2018 IPR029056 Ribokinase-like CHH28_RS01850 58130534a7aa6fbe38dc652ff9628c98 329 Pfam PF00294 pfkB family carbohydrate kinase 48 317 5.5E-58 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CHH28_RS01850 58130534a7aa6fbe38dc652ff9628c98 329 SUPERFAMILY SSF53613 1 317 1.43E-76 T 29-03-2018 IPR029056 Ribokinase-like CHH28_RS01850 58130534a7aa6fbe38dc652ff9628c98 329 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 273 286 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CHH28_RS03980 f968fd9738c153b7734b4b820feaf96e 178 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 138 157 - T 29-03-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03980 f968fd9738c153b7734b4b820feaf96e 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 175 6.9E-47 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03980 f968fd9738c153b7734b4b820feaf96e 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 19.392 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03980 f968fd9738c153b7734b4b820feaf96e 178 Gene3D G3DSA:1.10.520.20 2 107 1.1E-30 T 29-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03980 f968fd9738c153b7734b4b820feaf96e 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 9.1E-25 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03980 f968fd9738c153b7734b4b820feaf96e 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 9.1E-25 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03980 f968fd9738c153b7734b4b820feaf96e 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 9.1E-25 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03980 f968fd9738c153b7734b4b820feaf96e 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 9.1E-25 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03980 f968fd9738c153b7734b4b820feaf96e 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 9.1E-25 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03980 f968fd9738c153b7734b4b820feaf96e 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 9.9E-53 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03980 f968fd9738c153b7734b4b820feaf96e 178 SUPERFAMILY SSF47928 3 106 5.1E-25 T 29-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 8.3E-23 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 PRINTS PR00702 Acriflavin resistance protein family signature 44 62 8.3E-23 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 PRINTS PR00702 Acriflavin resistance protein family signature 16 40 8.3E-23 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 8.3E-23 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 8.3E-23 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 8.3E-23 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 SUPERFAMILY SSF82714 184 268 5.62E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 SUPERFAMILY SSF82693 271 329 3.14E-5 T 29-03-2018 CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 SUPERFAMILY SSF82693 158 183 3.14E-5 T 29-03-2018 CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 Pfam PF00873 AcrB/AcrD/AcrF family 10 1021 1.8E-153 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 Gene3D G3DSA:3.30.2090.10 715 802 2.9E-9 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 Gene3D G3DSA:3.30.2090.10 182 271 9.9E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 Gene3D G3DSA:1.20.1640.10 285 509 5.0E-33 T 29-03-2018 CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 SUPERFAMILY SSF82714 725 801 1.02E-8 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 SUPERFAMILY SSF82866 299 494 1.57E-32 T 29-03-2018 CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 Gene3D G3DSA:3.30.70.1430 47 146 3.0E-18 T 29-03-2018 CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 Gene3D G3DSA:1.20.1640.10 803 1024 2.4E-36 T 29-03-2018 CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 SUPERFAMILY SSF82693 50 138 2.25E-14 T 29-03-2018 CHH28_RS05700 41c49eb603f040f0e1550b66c0284667 1048 SUPERFAMILY SSF82866 801 1023 6.67E-44 T 29-03-2018 CHH28_RS15405 177b60d8619a3e428c37f07780287ae3 455 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 454 3.9E-177 T 29-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CHH28_RS15405 177b60d8619a3e428c37f07780287ae3 455 Pfam PF09190 DALR domain 342 400 1.1E-20 T 29-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CHH28_RS15405 177b60d8619a3e428c37f07780287ae3 455 Gene3D G3DSA:3.40.50.620 1 306 8.8E-94 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS15405 177b60d8619a3e428c37f07780287ae3 455 SMART SM00840 342 400 1.0E-25 T 29-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CHH28_RS15405 177b60d8619a3e428c37f07780287ae3 455 Gene3D G3DSA:1.20.120.640 307 392 3.6E-22 T 29-03-2018 CHH28_RS15405 177b60d8619a3e428c37f07780287ae3 455 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 223 244 4.6E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CHH28_RS15405 177b60d8619a3e428c37f07780287ae3 455 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 4.6E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CHH28_RS15405 177b60d8619a3e428c37f07780287ae3 455 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 192 210 4.6E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CHH28_RS15405 177b60d8619a3e428c37f07780287ae3 455 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 4.6E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CHH28_RS15405 177b60d8619a3e428c37f07780287ae3 455 SUPERFAMILY SSF47323 317 454 3.53E-37 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS15405 177b60d8619a3e428c37f07780287ae3 455 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 314 5.1E-133 T 29-03-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CHH28_RS15405 177b60d8619a3e428c37f07780287ae3 455 SUPERFAMILY SSF52374 4 313 7.17E-102 T 29-03-2018 CHH28_RS15405 177b60d8619a3e428c37f07780287ae3 455 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 455 39.364 T 29-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CHH28_RS03105 53b9149a274abe3bd56a6d324db852ee 171 PRINTS PR00070 Dihydrofolate reductase signature 28 36 4.6E-15 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CHH28_RS03105 53b9149a274abe3bd56a6d324db852ee 171 PRINTS PR00070 Dihydrofolate reductase signature 41 52 4.6E-15 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CHH28_RS03105 53b9149a274abe3bd56a6d324db852ee 171 PRINTS PR00070 Dihydrofolate reductase signature 102 116 4.6E-15 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CHH28_RS03105 53b9149a274abe3bd56a6d324db852ee 171 PRINTS PR00070 Dihydrofolate reductase signature 14 24 4.6E-15 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CHH28_RS03105 53b9149a274abe3bd56a6d324db852ee 171 Pfam PF00186 Dihydrofolate reductase 3 170 3.2E-60 T 29-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CHH28_RS03105 53b9149a274abe3bd56a6d324db852ee 171 Gene3D G3DSA:3.40.430.10 1 171 1.7E-56 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CHH28_RS03105 53b9149a274abe3bd56a6d324db852ee 171 PIRSF PIRSF000194 1 171 6.2E-63 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CHH28_RS03105 53b9149a274abe3bd56a6d324db852ee 171 SUPERFAMILY SSF53597 3 171 2.24E-59 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CHH28_RS01780 3a3668cb90633f3191256285011d43ce 241 SUPERFAMILY SSF56935 180 212 3.97E-5 T 29-03-2018 CHH28_RS01780 3a3668cb90633f3191256285011d43ce 241 SUPERFAMILY SSF56935 16 146 3.97E-5 T 29-03-2018 CHH28_RS01780 3a3668cb90633f3191256285011d43ce 241 Gene3D G3DSA:2.40.160.10 1 241 4.0E-10 T 29-03-2018 CHH28_RS06435 b0fb70c4889ec89b4e33412b1dcbb1fe 142 Gene3D G3DSA:3.40.630.30 2 132 5.4E-21 T 29-03-2018 CHH28_RS06435 b0fb70c4889ec89b4e33412b1dcbb1fe 142 SUPERFAMILY SSF55729 14 126 2.36E-21 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS06435 b0fb70c4889ec89b4e33412b1dcbb1fe 142 Pfam PF13508 Acetyltransferase (GNAT) domain 52 123 2.7E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS05905 1531be9a91981f6188594e0572ab2f4a 221 SMART SM00862 145 216 1.3E-15 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS05905 1531be9a91981f6188594e0572ab2f4a 221 Gene3D G3DSA:1.10.10.10 124 221 8.0E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS05905 1531be9a91981f6188594e0572ab2f4a 221 Pfam PF00072 Response regulator receiver domain 3 112 5.3E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS05905 1531be9a91981f6188594e0572ab2f4a 221 Gene3D G3DSA:3.40.50.2300 1 123 1.4E-32 T 29-03-2018 CHH28_RS05905 1531be9a91981f6188594e0572ab2f4a 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 215 7.2E-17 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS05905 1531be9a91981f6188594e0572ab2f4a 221 SUPERFAMILY SSF52172 1 118 3.56E-36 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS05905 1531be9a91981f6188594e0572ab2f4a 221 SUPERFAMILY SSF46894 118 216 1.36E-21 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CHH28_RS05905 1531be9a91981f6188594e0572ab2f4a 221 SMART SM00448 1 112 3.1E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13725 a3d3950e9da0aa670cfa7651c90a632b 111 SUPERFAMILY SSF52091 9 101 3.92E-21 T 29-03-2018 IPR002645 STAS domain CHH28_RS13725 a3d3950e9da0aa670cfa7651c90a632b 111 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 7 102 3.2E-17 T 29-03-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 CHH28_RS13725 a3d3950e9da0aa670cfa7651c90a632b 111 Pfam PF01740 STAS domain 13 99 1.9E-13 T 29-03-2018 IPR002645 STAS domain CHH28_RS13725 a3d3950e9da0aa670cfa7651c90a632b 111 Gene3D G3DSA:3.30.750.24 1 110 1.5E-16 T 29-03-2018 IPR002645 STAS domain CHH28_RS08205 f89c74ec717005aa0db708ad60143a89 377 Gene3D G3DSA:3.40.50.720 2 131 2.1E-18 T 29-03-2018 CHH28_RS08205 f89c74ec717005aa0db708ad60143a89 377 SUPERFAMILY SSF51735 5 147 1.17E-15 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS08205 f89c74ec717005aa0db708ad60143a89 377 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 6 111 7.4E-14 T 29-03-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 CHH28_RS03180 329c652212988b3c70bbe4b6cc0be304 318 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 242 1.2E-48 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CHH28_RS03180 329c652212988b3c70bbe4b6cc0be304 318 Gene3D G3DSA:3.40.50.720 1 182 2.4E-24 T 29-03-2018 CHH28_RS03180 329c652212988b3c70bbe4b6cc0be304 318 Gene3D G3DSA:3.90.25.10 183 317 3.8E-22 T 29-03-2018 CHH28_RS03180 329c652212988b3c70bbe4b6cc0be304 318 SUPERFAMILY SSF51735 2 316 1.49E-62 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS03180 329c652212988b3c70bbe4b6cc0be304 318 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 317 1.6E-131 T 29-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 CHH28_RS03180 329c652212988b3c70bbe4b6cc0be304 318 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 318 49.163 T 29-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 CHH28_RS03480 37d33bbdd069e95d12d26a9bede976bf 333 Gene3D G3DSA:3.20.20.100 1 331 6.7E-102 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CHH28_RS03480 37d33bbdd069e95d12d26a9bede976bf 333 Pfam PF00248 Aldo/keto reductase family 21 313 7.8E-74 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CHH28_RS03480 37d33bbdd069e95d12d26a9bede976bf 333 SUPERFAMILY SSF51430 11 314 3.93E-96 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CHH28_RS05085 9f66615b784b95b10bb056e78b756589 254 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 232 253 2.3E-6 T 29-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CHH28_RS05085 9f66615b784b95b10bb056e78b756589 254 SUPERFAMILY SSF52540 13 252 3.59E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS05085 9f66615b784b95b10bb056e78b756589 254 SMART SM00382 38 230 0.0018 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS05085 9f66615b784b95b10bb056e78b756589 254 Pfam PF00005 ABC transporter 29 183 1.7E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS05085 9f66615b784b95b10bb056e78b756589 254 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 13 254 2.8E-114 T 29-03-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD CHH28_RS05085 9f66615b784b95b10bb056e78b756589 254 Gene3D G3DSA:3.40.50.300 4 253 2.0E-51 T 29-03-2018 CHH28_RS14855 e7429b5181fb183ab79f03c720ef2f32 212 Hamap MF_00165 Thymidylate kinase [tmk]. 7 209 28.23 T 29-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CHH28_RS14855 e7429b5181fb183ab79f03c720ef2f32 212 ProSitePatterns PS01331 Thymidylate kinase signature. 97 109 - T 29-03-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CHH28_RS14855 e7429b5181fb183ab79f03c720ef2f32 212 Gene3D G3DSA:3.40.50.300 3 202 1.3E-55 T 29-03-2018 CHH28_RS14855 e7429b5181fb183ab79f03c720ef2f32 212 Pfam PF02223 Thymidylate kinase 11 201 7.1E-46 T 29-03-2018 CHH28_RS14855 e7429b5181fb183ab79f03c720ef2f32 212 SUPERFAMILY SSF52540 1 191 1.5E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS14855 e7429b5181fb183ab79f03c720ef2f32 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 5 201 2.7E-50 T 29-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CHH28_RS19435 7d5ad0ff9881feb443bc32bdf9409185 286 SUPERFAMILY SSF52374 1 282 4.22E-104 T 29-03-2018 CHH28_RS19435 7d5ad0ff9881feb443bc32bdf9409185 286 Hamap MF_00158 Pantothenate synthetase [panC]. 2 279 39.796 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CHH28_RS19435 7d5ad0ff9881feb443bc32bdf9409185 286 Gene3D G3DSA:3.40.50.620 1 176 6.1E-76 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS19435 7d5ad0ff9881feb443bc32bdf9409185 286 Pfam PF02569 Pantoate-beta-alanine ligase 3 277 1.9E-103 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CHH28_RS19435 7d5ad0ff9881feb443bc32bdf9409185 286 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 277 2.1E-103 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CHH28_RS19435 7d5ad0ff9881feb443bc32bdf9409185 286 Gene3D G3DSA:3.30.1300.10 177 285 8.5E-33 T 29-03-2018 CHH28_RS03410 995d6bfe73e671ae44ee68571fd4742d 393 SUPERFAMILY SSF56059 271 390 2.05E-89 T 29-03-2018 CHH28_RS03410 995d6bfe73e671ae44ee68571fd4742d 393 SUPERFAMILY SSF56059 1 169 2.05E-89 T 29-03-2018 CHH28_RS03410 995d6bfe73e671ae44ee68571fd4742d 393 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 391 1.7E-155 T 29-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CHH28_RS03410 995d6bfe73e671ae44ee68571fd4742d 393 SUPERFAMILY SSF52440 179 284 3.45E-40 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CHH28_RS10480 5c25395d3b53402521be484ab07826ff 456 Pfam PF00271 Helicase conserved C-terminal domain 230 338 3.9E-29 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS10480 5c25395d3b53402521be484ab07826ff 456 Gene3D G3DSA:3.40.50.300 1 224 5.2E-62 T 29-03-2018 CHH28_RS10480 5c25395d3b53402521be484ab07826ff 456 Gene3D G3DSA:3.40.50.300 225 450 2.2E-48 T 29-03-2018 CHH28_RS10480 5c25395d3b53402521be484ab07826ff 456 SMART SM00490 257 338 1.7E-31 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS10480 5c25395d3b53402521be484ab07826ff 456 SUPERFAMILY SSF52540 73 358 1.46E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS10480 5c25395d3b53402521be484ab07826ff 456 Pfam PF00270 DEAD/DEAH box helicase 26 193 1.1E-47 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CHH28_RS10480 5c25395d3b53402521be484ab07826ff 456 SMART SM00487 20 221 3.4E-62 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CHH28_RS10480 5c25395d3b53402521be484ab07826ff 456 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 450 49.769 T 29-03-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 CHH28_RS10480 5c25395d3b53402521be484ab07826ff 456 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CHH28_RS02680 4a6754f3334fd48089cc7f444c4358e4 563 Gene3D G3DSA:2.40.110.10 186 288 3.1E-19 T 29-03-2018 CHH28_RS02680 4a6754f3334fd48089cc7f444c4358e4 563 SUPERFAMILY SSF56645 97 309 1.83E-34 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CHH28_RS02680 4a6754f3334fd48089cc7f444c4358e4 563 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 300 453 5.5E-29 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS02680 4a6754f3334fd48089cc7f444c4358e4 563 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 193 205 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CHH28_RS02680 4a6754f3334fd48089cc7f444c4358e4 563 Gene3D G3DSA:1.20.140.10 289 459 5.1E-35 T 29-03-2018 CHH28_RS02680 4a6754f3334fd48089cc7f444c4358e4 563 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 413 432 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CHH28_RS02680 4a6754f3334fd48089cc7f444c4358e4 563 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 191 289 4.1E-13 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CHH28_RS02680 4a6754f3334fd48089cc7f444c4358e4 563 SUPERFAMILY SSF47203 298 457 2.09E-37 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS07425 ab785136bba07d3b274c84fe50bb55c8 239 Pfam PF00583 Acetyltransferase (GNAT) family 131 225 4.3E-7 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS07425 ab785136bba07d3b274c84fe50bb55c8 239 SUPERFAMILY SSF55729 69 231 1.27E-20 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS07425 ab785136bba07d3b274c84fe50bb55c8 239 Gene3D G3DSA:3.40.630.30 100 239 1.1E-16 T 29-03-2018 CHH28_RS19330 7fa35438fa81a6c9e877039c7593e29b 116 Gene3D G3DSA:2.160.20.80 8 109 1.6E-18 T 29-03-2018 CHH28_RS19330 7fa35438fa81a6c9e877039c7593e29b 116 PIRSF PIRSF029688 1 114 1.6E-36 T 29-03-2018 IPR016933 Pentapeptide repeat-containing uncharacterised conserved protein UCP029688 CHH28_RS19330 7fa35438fa81a6c9e877039c7593e29b 116 SUPERFAMILY SSF141571 21 90 4.19E-16 T 29-03-2018 CHH28_RS19330 7fa35438fa81a6c9e877039c7593e29b 116 Pfam PF00805 Pentapeptide repeats (8 copies) 33 67 2.6E-9 T 29-03-2018 IPR001646 Pentapeptide repeat CHH28_RS18455 6fdea8cdbe26a4f9c7ae44550122bb91 235 SUPERFAMILY SSF52317 15 199 2.29E-41 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS18455 6fdea8cdbe26a4f9c7ae44550122bb91 235 Pfam PF00117 Glutamine amidotransferase class-I 16 190 4.2E-12 T 29-03-2018 IPR017926 Glutamine amidotransferase CHH28_RS18455 6fdea8cdbe26a4f9c7ae44550122bb91 235 Gene3D G3DSA:3.40.50.880 15 235 1.1E-37 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS08465 b9ba75eb3caa6fdd5fb8ab9ff35cbbbe 208 SUPERFAMILY SSF47616 81 207 1.56E-26 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CHH28_RS08465 b9ba75eb3caa6fdd5fb8ab9ff35cbbbe 208 SUPERFAMILY SSF52833 9 108 2.48E-23 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS08465 b9ba75eb3caa6fdd5fb8ab9ff35cbbbe 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 116 193 1.6E-7 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CHH28_RS08465 b9ba75eb3caa6fdd5fb8ab9ff35cbbbe 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 86 3.6E-18 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CHH28_RS08465 b9ba75eb3caa6fdd5fb8ab9ff35cbbbe 208 Gene3D G3DSA:1.20.1050.10 96 207 7.1E-20 T 29-03-2018 CHH28_RS08465 b9ba75eb3caa6fdd5fb8ab9ff35cbbbe 208 Gene3D G3DSA:3.40.30.10 3 95 7.4E-25 T 29-03-2018 CHH28_RS05885 e77035a94a232f2407c66f9cb87dfb58 450 SMART SM00471 184 320 3.4E-10 T 29-03-2018 IPR003607 HD/PDEase domain CHH28_RS05885 e77035a94a232f2407c66f9cb87dfb58 450 Pfam PF11871 Domain of unknown function (DUF3391) 41 157 1.6E-25 T 29-03-2018 IPR021812 Protein of unknown function DUF3391 CHH28_RS05885 e77035a94a232f2407c66f9cb87dfb58 450 Gene3D G3DSA:1.10.3210.10 108 352 1.7E-43 T 29-03-2018 CHH28_RS05885 e77035a94a232f2407c66f9cb87dfb58 450 SUPERFAMILY SSF109604 177 350 2.93E-36 T 29-03-2018 CHH28_RS05885 e77035a94a232f2407c66f9cb87dfb58 450 Pfam PF13487 HD domain 239 301 6.5E-12 T 29-03-2018 CHH28_RS14940 b25cff8d3425ac0c5e71f07b584a153b 292 ProSitePatterns PS00161 Isocitrate lyase signature. 117 122 - T 29-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 CHH28_RS14940 b25cff8d3425ac0c5e71f07b584a153b 292 SUPERFAMILY SSF51621 4 285 8.97E-99 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CHH28_RS14940 b25cff8d3425ac0c5e71f07b584a153b 292 Pfam PF13714 Phosphoenolpyruvate phosphomutase 7 251 2.4E-49 T 29-03-2018 CHH28_RS14940 b25cff8d3425ac0c5e71f07b584a153b 292 Gene3D G3DSA:3.20.20.60 1 292 2.5E-89 T 29-03-2018 CHH28_RS14940 b25cff8d3425ac0c5e71f07b584a153b 292 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 1 288 49.127 T 29-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 CHH28_RS14940 b25cff8d3425ac0c5e71f07b584a153b 292 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 4 287 1.5E-127 T 29-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 CHH28_RS15690 12f67f3855f35ae3907808fc3c197e8f 534 Gene3D G3DSA:3.30.9.10 194 347 8.9E-41 T 29-03-2018 CHH28_RS15690 12f67f3855f35ae3907808fc3c197e8f 534 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 56 68 9.9E-24 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CHH28_RS15690 12f67f3855f35ae3907808fc3c197e8f 534 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 369 381 9.9E-24 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CHH28_RS15690 12f67f3855f35ae3907808fc3c197e8f 534 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 340 346 9.9E-24 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CHH28_RS15690 12f67f3855f35ae3907808fc3c197e8f 534 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 40 50 9.9E-24 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CHH28_RS15690 12f67f3855f35ae3907808fc3c197e8f 534 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 27 39 9.9E-24 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CHH28_RS15690 12f67f3855f35ae3907808fc3c197e8f 534 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 421 514 2.5E-14 T 29-03-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CHH28_RS15690 12f67f3855f35ae3907808fc3c197e8f 534 Pfam PF01266 FAD dependent oxidoreductase 28 350 4.3E-48 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CHH28_RS15690 12f67f3855f35ae3907808fc3c197e8f 534 Gene3D G3DSA:3.30.9.10 105 193 3.1E-8 T 29-03-2018 CHH28_RS15690 12f67f3855f35ae3907808fc3c197e8f 534 SUPERFAMILY SSF51905 27 349 8.24E-36 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS15690 12f67f3855f35ae3907808fc3c197e8f 534 Gene3D G3DSA:3.50.50.60 3 97 4.9E-6 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS19480 f7b900e988d251347d9b42adff870740 206 Hamap MF_00013 Octanoyltransferase [lipB]. 2 204 36.261 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CHH28_RS19480 f7b900e988d251347d9b42adff870740 206 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 72 125 1.0E-14 T 29-03-2018 CHH28_RS19480 f7b900e988d251347d9b42adff870740 206 Gene3D G3DSA:3.30.930.10 1 202 2.4E-60 T 29-03-2018 CHH28_RS19480 f7b900e988d251347d9b42adff870740 206 PIRSF PIRSF016262 1 205 2.4E-59 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CHH28_RS19480 f7b900e988d251347d9b42adff870740 206 SUPERFAMILY SSF55681 2 202 1.16E-65 T 29-03-2018 CHH28_RS19480 f7b900e988d251347d9b42adff870740 206 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 24 201 3.3E-67 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CHH28_RS19480 f7b900e988d251347d9b42adff870740 206 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 68 83 - T 29-03-2018 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CHH28_RS19480 f7b900e988d251347d9b42adff870740 206 Pfam PF03099 Biotin/lipoate A/B protein ligase family 60 156 2.7E-8 T 29-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CHH28_RS08530 3bca368636eb7094e13f2bdebf129b79 324 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 3.5E-178 T 29-03-2018 IPR015004 Protein of unknown function DUF1852 CHH28_RS08530 3bca368636eb7094e13f2bdebf129b79 324 PIRSF PIRSF034367 1 324 1.4E-183 T 29-03-2018 IPR015004 Protein of unknown function DUF1852 CHH28_RS12060 087f7b7afaf531e27ceb504bd4e36099 520 SUPERFAMILY SSF51338 13 51 2.0E-18 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS12060 087f7b7afaf531e27ceb504bd4e36099 520 SUPERFAMILY SSF51338 474 517 2.0E-18 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS12060 087f7b7afaf531e27ceb504bd4e36099 520 SUPERFAMILY SSF51556 50 107 6.19E-32 T 29-03-2018 IPR032466 Metal-dependent hydrolase CHH28_RS12060 087f7b7afaf531e27ceb504bd4e36099 520 SUPERFAMILY SSF51556 187 475 6.19E-32 T 29-03-2018 IPR032466 Metal-dependent hydrolase CHH28_RS12060 087f7b7afaf531e27ceb504bd4e36099 520 Pfam PF07969 Amidohydrolase family 40 515 3.5E-93 T 29-03-2018 IPR013108 Amidohydrolase 3 CHH28_RS12060 087f7b7afaf531e27ceb504bd4e36099 520 Gene3D G3DSA:2.30.40.10 454 519 1.1E-11 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS12060 087f7b7afaf531e27ceb504bd4e36099 520 Gene3D G3DSA:3.20.20.140 60 453 5.6E-36 T 29-03-2018 CHH28_RS12060 087f7b7afaf531e27ceb504bd4e36099 520 Gene3D G3DSA:2.30.40.10 1 59 1.3E-13 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS12740 613b356b4388f187f1dd987fac1c9bea 344 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 18 199 2.9E-40 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS12740 613b356b4388f187f1dd987fac1c9bea 344 Gene3D G3DSA:1.10.10.60 277 341 2.4E-18 T 29-03-2018 CHH28_RS12740 613b356b4388f187f1dd987fac1c9bea 344 SUPERFAMILY SSF46689 278 329 5.82E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS12740 613b356b4388f187f1dd987fac1c9bea 344 SMART SM00342 242 325 2.5E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS12740 613b356b4388f187f1dd987fac1c9bea 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 294 309 4.4E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS12740 613b356b4388f187f1dd987fac1c9bea 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 309 325 4.4E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS12740 613b356b4388f187f1dd987fac1c9bea 344 Pfam PF12833 Helix-turn-helix domain 250 326 3.9E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS12740 613b356b4388f187f1dd987fac1c9bea 344 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 279 321 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 SMART SM01358 33 257 1.9E-9 T 29-03-2018 IPR032255 Helical bimodular sensor domain CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 SUPERFAMILY SSF158472 286 333 1.19E-6 T 29-03-2018 CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 Pfam PF00672 HAMP domain 286 326 6.8E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 Gene3D G3DSA:3.30.565.10 442 601 9.0E-50 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 Pfam PF00512 His Kinase A (phospho-acceptor) domain 371 436 6.4E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 SUPERFAMILY SSF47384 355 437 5.49E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 SUPERFAMILY SSF55874 425 596 2.36E-48 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 SMART SM00448 732 844 1.2E-33 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 SUPERFAMILY SSF52172 733 849 9.53E-37 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 Pfam PF00072 Response regulator receiver domain 734 843 2.9E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 Gene3D G3DSA:1.10.287.130 340 432 3.0E-16 T 29-03-2018 CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 SMART SM00388 371 436 5.3E-22 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 Gene3D G3DSA:3.40.50.2300 720 855 7.2E-40 T 29-03-2018 CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 484 593 7.7E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 SMART SM00387 483 594 8.1E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 572 2.8E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 591 2.8E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 533 2.8E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS13050 200862aaa19d87aa70ef096715643a5b 855 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 547 2.8E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS04490 0038173155cbefc68ca6521173b3eb97 295 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 3 282 1.1E-55 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CHH28_RS04490 0038173155cbefc68ca6521173b3eb97 295 PIRSF PIRSF026649 1 291 8.8E-90 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CHH28_RS14020 b0acab6cf100db3fcc2c026feed7d99f 437 SUPERFAMILY SSF102735 1 131 1.03E-30 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CHH28_RS14020 b0acab6cf100db3fcc2c026feed7d99f 437 SUPERFAMILY SSF54534 89 242 1.71E-36 T 29-03-2018 CHH28_RS14020 b0acab6cf100db3fcc2c026feed7d99f 437 PIRSF PIRSF003095 1 435 9.6E-113 T 29-03-2018 IPR005215 Trigger factor GO:0015031 CHH28_RS14020 b0acab6cf100db3fcc2c026feed7d99f 437 Gene3D G3DSA:1.10.3120.10 212 391 4.0E-44 T 29-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CHH28_RS14020 b0acab6cf100db3fcc2c026feed7d99f 437 SUPERFAMILY SSF109998 249 430 5.1E-41 T 29-03-2018 IPR027304 Trigger factor/SurA domain CHH28_RS14020 b0acab6cf100db3fcc2c026feed7d99f 437 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 266 414 2.3E-32 T 29-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CHH28_RS14020 b0acab6cf100db3fcc2c026feed7d99f 437 Hamap MF_00303 Trigger factor [tig]. 1 420 20.591 T 29-03-2018 IPR005215 Trigger factor GO:0015031 CHH28_RS14020 b0acab6cf100db3fcc2c026feed7d99f 437 TIGRFAM TIGR00115 tig: trigger factor 11 413 6.2E-129 T 29-03-2018 IPR005215 Trigger factor GO:0015031 CHH28_RS14020 b0acab6cf100db3fcc2c026feed7d99f 437 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 1.9E-31 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CHH28_RS14020 b0acab6cf100db3fcc2c026feed7d99f 437 Gene3D G3DSA:3.30.70.1050 1 119 6.1E-27 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CHH28_RS14020 b0acab6cf100db3fcc2c026feed7d99f 437 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 238 7.4E-16 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CHH28_RS11465 4b375bed392ebdfd15dc893cd387d39e 255 SUPERFAMILY SSF64005 13 237 3.4E-86 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CHH28_RS11465 4b375bed392ebdfd15dc893cd387d39e 255 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 15 242 1.2E-95 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CHH28_RS11465 4b375bed392ebdfd15dc893cd387d39e 255 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 242 8.7E-81 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CHH28_RS11465 4b375bed392ebdfd15dc893cd387d39e 255 Gene3D G3DSA:3.40.1180.10 3 246 5.2E-94 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CHH28_RS11465 4b375bed392ebdfd15dc893cd387d39e 255 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 29-03-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199 CHH28_RS11465 4b375bed392ebdfd15dc893cd387d39e 255 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 243 39.646 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CHH28_RS05100 c27032f05a2cb667ae1dd18909ec8103 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 8.7E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS05100 c27032f05a2cb667ae1dd18909ec8103 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 8.7E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS05100 c27032f05a2cb667ae1dd18909ec8103 203 SUPERFAMILY SSF46689 5 78 1.36E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS05100 c27032f05a2cb667ae1dd18909ec8103 203 Gene3D G3DSA:1.10.357.10 64 202 2.9E-17 T 29-03-2018 CHH28_RS05100 c27032f05a2cb667ae1dd18909ec8103 203 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 100 197 5.6E-10 T 29-03-2018 CHH28_RS05100 c27032f05a2cb667ae1dd18909ec8103 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 1.4E-16 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS05100 c27032f05a2cb667ae1dd18909ec8103 203 SUPERFAMILY SSF48498 83 194 6.04E-11 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CHH28_RS05100 c27032f05a2cb667ae1dd18909ec8103 203 Gene3D G3DSA:1.10.10.60 7 63 9.3E-21 T 29-03-2018 CHH28_RS18005 4c6aeec98f7b21a1586d834f911c745a 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 8.3E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CHH28_RS18005 4c6aeec98f7b21a1586d834f911c745a 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 8.3E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CHH28_RS18005 4c6aeec98f7b21a1586d834f911c745a 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 8.3E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CHH28_RS18005 4c6aeec98f7b21a1586d834f911c745a 257 SUPERFAMILY SSF52343 103 255 2.1E-40 T 29-03-2018 CHH28_RS18005 4c6aeec98f7b21a1586d834f911c745a 257 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 9.8E-6 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CHH28_RS18005 4c6aeec98f7b21a1586d834f911c745a 257 PRINTS PR00410 Phenol hydroxylase reductase family signature 51 58 9.8E-6 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CHH28_RS18005 4c6aeec98f7b21a1586d834f911c745a 257 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 9.8E-6 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CHH28_RS18005 4c6aeec98f7b21a1586d834f911c745a 257 Gene3D G3DSA:3.40.50.80 98 254 3.8E-22 T 29-03-2018 CHH28_RS18005 4c6aeec98f7b21a1586d834f911c745a 257 SUPERFAMILY SSF63380 4 99 3.58E-24 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CHH28_RS18005 4c6aeec98f7b21a1586d834f911c745a 257 Gene3D G3DSA:2.40.30.10 2 96 2.6E-16 T 29-03-2018 CHH28_RS18005 4c6aeec98f7b21a1586d834f911c745a 257 Pfam PF00970 Oxidoreductase FAD-binding domain 16 91 1.3E-7 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CHH28_RS18005 4c6aeec98f7b21a1586d834f911c745a 257 Pfam PF00175 Oxidoreductase NAD-binding domain 112 227 4.5E-9 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CHH28_RS17790 b92cd7f9930503caf7403abd2b798efb 368 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CHH28_RS17790 b92cd7f9930503caf7403abd2b798efb 368 ProSitePatterns PS00789 Chorismate synthase signature 3. 318 334 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CHH28_RS17790 b92cd7f9930503caf7403abd2b798efb 368 SUPERFAMILY SSF103263 4 351 3.79E-149 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CHH28_RS17790 b92cd7f9930503caf7403abd2b798efb 368 Gene3D G3DSA:3.60.150.10 3 357 5.3E-160 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CHH28_RS17790 b92cd7f9930503caf7403abd2b798efb 368 TIGRFAM TIGR00033 aroC: chorismate synthase 10 349 2.0E-139 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CHH28_RS17790 b92cd7f9930503caf7403abd2b798efb 368 PIRSF PIRSF001456 3 363 1.0E-139 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CHH28_RS17790 b92cd7f9930503caf7403abd2b798efb 368 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CHH28_RS17790 b92cd7f9930503caf7403abd2b798efb 368 Hamap MF_00300 Chorismate synthase [aroC]. 10 351 37.242 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CHH28_RS17790 b92cd7f9930503caf7403abd2b798efb 368 Pfam PF01264 Chorismate synthase 10 344 1.3E-140 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CHH28_RS01535 10b043baa91aa4977f1119db2fe80a5f 96 Gene3D G3DSA:1.10.3210.10 1 77 2.6E-10 T 29-03-2018 CHH28_RS19215 e7c8b813ab9eda4c040ad62eb7285af2 116 Gene3D G3DSA:1.10.10.10 3 116 1.5E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS19215 e7c8b813ab9eda4c040ad62eb7285af2 116 Pfam PF01638 HxlR-like helix-turn-helix 15 102 5.2E-24 T 29-03-2018 IPR002577 Helix-turn-helix, HxlR type CHH28_RS19215 e7c8b813ab9eda4c040ad62eb7285af2 116 SUPERFAMILY SSF46785 4 109 2.73E-32 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04740 4d59b53278ca56b425c2dd8e120cd357 199 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 24 185 21.214 T 29-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 CHH28_RS04740 4d59b53278ca56b425c2dd8e120cd357 199 Gene3D G3DSA:3.40.1410.10 19 184 4.5E-35 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CHH28_RS04740 4d59b53278ca56b425c2dd8e120cd357 199 Pfam PF04345 Chorismate lyase 34 179 5.4E-25 T 29-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 CHH28_RS04740 4d59b53278ca56b425c2dd8e120cd357 199 SUPERFAMILY SSF64288 24 179 3.99E-38 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CHH28_RS07715 08d6306148b27f1d247398ef23c1df26 241 SUPERFAMILY SSF51182 15 156 1.96E-6 T 29-03-2018 IPR011051 RmlC-like cupin domain CHH28_RS07715 08d6306148b27f1d247398ef23c1df26 241 Pfam PF12833 Helix-turn-helix domain 159 237 2.1E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS07715 08d6306148b27f1d247398ef23c1df26 241 SMART SM00342 153 236 5.9E-31 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS07715 08d6306148b27f1d247398ef23c1df26 241 Gene3D G3DSA:1.10.10.60 189 241 2.1E-14 T 29-03-2018 CHH28_RS07715 08d6306148b27f1d247398ef23c1df26 241 Gene3D G3DSA:1.10.10.60 145 188 3.8E-15 T 29-03-2018 CHH28_RS07715 08d6306148b27f1d247398ef23c1df26 241 Gene3D G3DSA:2.60.120.10 10 144 6.2E-6 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS07715 08d6306148b27f1d247398ef23c1df26 241 SUPERFAMILY SSF46689 189 238 1.21E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS07715 08d6306148b27f1d247398ef23c1df26 241 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 190 232 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CHH28_RS07715 08d6306148b27f1d247398ef23c1df26 241 SUPERFAMILY SSF46689 136 187 8.96E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS03995 663431fa0678d0d9b2d12a8c58050948 287 Gene3D G3DSA:1.20.120.220 113 287 5.6E-47 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03995 663431fa0678d0d9b2d12a8c58050948 287 Pfam PF00119 ATP synthase A chain 67 281 2.7E-52 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03995 663431fa0678d0d9b2d12a8c58050948 287 SUPERFAMILY SSF81336 114 281 2.88E-41 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03995 663431fa0678d0d9b2d12a8c58050948 287 PRINTS PR00123 ATP synthase A subunit signature 220 242 1.9E-12 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03995 663431fa0678d0d9b2d12a8c58050948 287 PRINTS PR00123 ATP synthase A subunit signature 267 282 1.9E-12 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03995 663431fa0678d0d9b2d12a8c58050948 287 PRINTS PR00123 ATP synthase A subunit signature 122 138 1.9E-12 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03995 663431fa0678d0d9b2d12a8c58050948 287 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 56 283 1.0E-39 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03995 663431fa0678d0d9b2d12a8c58050948 287 Hamap MF_01393 ATP synthase subunit a [atpB]. 5 287 15.07 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03995 663431fa0678d0d9b2d12a8c58050948 287 ProSitePatterns PS00449 ATP synthase a subunit signature. 223 232 - T 29-03-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS12580 e550d2712e56f47cbcd325d37d0ac66e 148 TIGRFAM TIGR02801 tolR: protein TolR 14 141 1.2E-41 T 29-03-2018 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 CHH28_RS12580 e550d2712e56f47cbcd325d37d0ac66e 148 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 141 1.6E-26 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CHH28_RS16970 2c3a88185e3eee885347a283ffec2caf 310 SUPERFAMILY SSF53850 18 290 4.55E-79 T 29-03-2018 CHH28_RS16970 2c3a88185e3eee885347a283ffec2caf 310 Gene3D G3DSA:3.40.190.10 14 153 7.5E-18 T 29-03-2018 CHH28_RS16970 2c3a88185e3eee885347a283ffec2caf 310 Gene3D G3DSA:3.40.190.10 154 310 7.2E-30 T 29-03-2018 CHH28_RS16970 2c3a88185e3eee885347a283ffec2caf 310 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 22 274 6.4E-50 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CHH28_RS16970 2c3a88185e3eee885347a283ffec2caf 310 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 18 297 1.1E-119 T 29-03-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 CHH28_RS16805 e90845552a449afc6e91095daa376bea 600 SMART SM00116 154 200 0.0053 T 29-03-2018 IPR000644 CBS domain CHH28_RS16805 e90845552a449afc6e91095daa376bea 600 SMART SM00116 217 264 0.2 T 29-03-2018 IPR000644 CBS domain CHH28_RS16805 e90845552a449afc6e91095daa376bea 600 SMART SM00100 11 127 5.0E-9 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS16805 e90845552a449afc6e91095daa376bea 600 SUPERFAMILY SSF54631 147 263 1.05E-17 T 29-03-2018 CHH28_RS16805 e90845552a449afc6e91095daa376bea 600 Pfam PF00027 Cyclic nucleotide-binding domain 30 111 8.3E-11 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS16805 e90845552a449afc6e91095daa376bea 600 Gene3D G3DSA:2.60.120.10 12 133 2.7E-18 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS16805 e90845552a449afc6e91095daa376bea 600 Gene3D G3DSA:3.30.460.10 280 454 7.3E-4 T 29-03-2018 CHH28_RS16805 e90845552a449afc6e91095daa376bea 600 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 460 595 5.2E-35 T 29-03-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding CHH28_RS16805 e90845552a449afc6e91095daa376bea 600 SUPERFAMILY SSF51206 8 119 2.62E-19 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CHH28_RS16805 e90845552a449afc6e91095daa376bea 600 Pfam PF00571 CBS domain 152 198 0.0033 T 29-03-2018 IPR000644 CBS domain CHH28_RS16805 e90845552a449afc6e91095daa376bea 600 Gene3D G3DSA:3.10.580.10 138 269 9.1E-16 T 29-03-2018 CHH28_RS16805 e90845552a449afc6e91095daa376bea 600 Pfam PF03445 Putative nucleotidyltransferase DUF294 289 419 1.7E-35 T 29-03-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 CHH28_RS14275 c6e7690595d3a7e115e35adf34b2e755 69 PIRSF PIRSF002599 1 69 3.2E-22 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CHH28_RS14275 c6e7690595d3a7e115e35adf34b2e755 69 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.5E-26 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CHH28_RS14275 c6e7690595d3a7e115e35adf34b2e755 69 SUPERFAMILY SSF50249 1 67 1.78E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS14275 c6e7690595d3a7e115e35adf34b2e755 69 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 1.2E-36 T 29-03-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 CHH28_RS14275 c6e7690595d3a7e115e35adf34b2e755 69 SMART SM00357 3 67 1.6E-22 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CHH28_RS14275 c6e7690595d3a7e115e35adf34b2e755 69 PRINTS PR00050 Cold shock protein signature 4 19 3.6E-13 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CHH28_RS14275 c6e7690595d3a7e115e35adf34b2e755 69 PRINTS PR00050 Cold shock protein signature 40 58 3.6E-13 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CHH28_RS14275 c6e7690595d3a7e115e35adf34b2e755 69 PRINTS PR00050 Cold shock protein signature 25 34 3.6E-13 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CHH28_RS14275 c6e7690595d3a7e115e35adf34b2e755 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 29-03-2018 IPR019844 Cold-shock conserved site CHH28_RS14275 c6e7690595d3a7e115e35adf34b2e755 69 Gene3D G3DSA:2.40.50.140 1 67 1.6E-25 T 29-03-2018 CHH28_RS11200 62e0e8590c07701c72a49a18f3d643af 217 PRINTS PR00094 Adenylate kinase signature 32 46 4.8E-34 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CHH28_RS11200 62e0e8590c07701c72a49a18f3d643af 217 PRINTS PR00094 Adenylate kinase signature 4 17 4.8E-34 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CHH28_RS11200 62e0e8590c07701c72a49a18f3d643af 217 PRINTS PR00094 Adenylate kinase signature 81 97 4.8E-34 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CHH28_RS11200 62e0e8590c07701c72a49a18f3d643af 217 PRINTS PR00094 Adenylate kinase signature 173 187 4.8E-34 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CHH28_RS11200 62e0e8590c07701c72a49a18f3d643af 217 PRINTS PR00094 Adenylate kinase signature 156 171 4.8E-34 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CHH28_RS11200 62e0e8590c07701c72a49a18f3d643af 217 Pfam PF05191 Adenylate kinase, active site lid 123 158 5.0E-15 T 29-03-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CHH28_RS11200 62e0e8590c07701c72a49a18f3d643af 217 Gene3D G3DSA:3.40.50.300 1 217 1.9E-63 T 29-03-2018 CHH28_RS11200 62e0e8590c07701c72a49a18f3d643af 217 SUPERFAMILY SSF52540 1 214 1.03E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11200 62e0e8590c07701c72a49a18f3d643af 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 187 1.3E-74 T 29-03-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CHH28_RS11200 62e0e8590c07701c72a49a18f3d643af 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 29-03-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CHH28_RS11200 62e0e8590c07701c72a49a18f3d643af 217 Pfam PF00406 Adenylate kinase 5 184 1.1E-56 T 29-03-2018 CHH28_RS11200 62e0e8590c07701c72a49a18f3d643af 217 Hamap MF_00235 Adenylate kinase [adk]. 1 217 50.447 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CHH28_RS15730 fcfc6b34ed8f0b5a891601ad1d908bc6 560 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 85 244 1.3E-21 T 29-03-2018 CHH28_RS15185 194ea6abea1a9935c0e1fcb39903df66 374 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 29-03-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 Reactome: R-HSA-71403 CHH28_RS15185 194ea6abea1a9935c0e1fcb39903df66 374 SUPERFAMILY SSF52283 305 360 2.3E-63 T 29-03-2018 CHH28_RS15185 194ea6abea1a9935c0e1fcb39903df66 374 SUPERFAMILY SSF52283 1 137 2.3E-63 T 29-03-2018 CHH28_RS15185 194ea6abea1a9935c0e1fcb39903df66 374 SUPERFAMILY SSF51735 137 303 5.29E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS15185 194ea6abea1a9935c0e1fcb39903df66 374 PIRSF PIRSF000183 1 371 3.8E-143 T 29-03-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 CHH28_RS15185 194ea6abea1a9935c0e1fcb39903df66 374 SMART SM01003 4 137 1.1E-75 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CHH28_RS15185 194ea6abea1a9935c0e1fcb39903df66 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 2.4E-76 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CHH28_RS15185 194ea6abea1a9935c0e1fcb39903df66 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 369 8.6E-147 T 29-03-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 CHH28_RS15185 194ea6abea1a9935c0e1fcb39903df66 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 9.5E-49 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CHH28_RS15185 194ea6abea1a9935c0e1fcb39903df66 374 Gene3D G3DSA:3.40.50.720 188 371 5.7E-43 T 29-03-2018 CHH28_RS15185 194ea6abea1a9935c0e1fcb39903df66 374 Gene3D G3DSA:3.40.50.720 1 187 4.3E-47 T 29-03-2018 CHH28_RS15185 194ea6abea1a9935c0e1fcb39903df66 374 SMART SM01002 149 297 2.6E-81 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CHH28_RS17865 19ba0abac9361c46cfa5bce235dfa0bf 566 Pfam PF00999 Sodium/hydrogen exchanger family 15 372 1.0E-47 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CHH28_RS17865 19ba0abac9361c46cfa5bce235dfa0bf 566 SUPERFAMILY SSF51735 416 549 1.72E-17 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS17865 19ba0abac9361c46cfa5bce235dfa0bf 566 Gene3D G3DSA:3.40.50.720 410 561 2.5E-20 T 29-03-2018 CHH28_RS17865 19ba0abac9361c46cfa5bce235dfa0bf 566 Pfam PF02254 TrkA-N domain 416 537 9.4E-16 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CHH28_RS07390 a93f583aa2ce44ac5a4c5e48797c327f 458 SMART SM00487 22 219 5.6E-61 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CHH28_RS07390 a93f583aa2ce44ac5a4c5e48797c327f 458 SUPERFAMILY SSF52540 72 353 1.92E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS07390 a93f583aa2ce44ac5a4c5e48797c327f 458 Pfam PF00271 Helicase conserved C-terminal domain 228 336 5.7E-29 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS07390 a93f583aa2ce44ac5a4c5e48797c327f 458 Gene3D G3DSA:3.40.50.300 2 221 1.9E-59 T 29-03-2018 CHH28_RS07390 a93f583aa2ce44ac5a4c5e48797c327f 458 Pfam PF03880 DbpA RNA binding domain 386 456 5.0E-22 T 29-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CHH28_RS07390 a93f583aa2ce44ac5a4c5e48797c327f 458 SMART SM00490 255 336 3.7E-32 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS07390 a93f583aa2ce44ac5a4c5e48797c327f 458 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CHH28_RS07390 a93f583aa2ce44ac5a4c5e48797c327f 458 Gene3D G3DSA:3.40.50.300 222 457 3.6E-41 T 29-03-2018 CHH28_RS07390 a93f583aa2ce44ac5a4c5e48797c327f 458 Pfam PF00270 DEAD/DEAH box helicase 27 193 1.2E-47 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CHH28_RS17465 7dcb7a6d6f18fef4bd970f60ddd6b028 206 SUPERFAMILY SSF52218 1 190 5.59E-49 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS17465 7dcb7a6d6f18fef4bd970f60ddd6b028 206 Gene3D G3DSA:3.40.50.360 3 196 2.8E-36 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS17465 7dcb7a6d6f18fef4bd970f60ddd6b028 206 Pfam PF02525 Flavodoxin-like fold 3 183 1.1E-32 T 29-03-2018 IPR003680 Flavodoxin-like fold CHH28_RS16155 db862122b16f27cdfbc74829b1736701 463 Gene3D G3DSA:1.20.1600.10 19 445 5.4E-64 T 29-03-2018 CHH28_RS16155 db862122b16f27cdfbc74829b1736701 463 SUPERFAMILY SSF56954 7 443 3.4E-78 T 29-03-2018 CHH28_RS16155 db862122b16f27cdfbc74829b1736701 463 Pfam PF02321 Outer membrane efflux protein 56 241 4.2E-17 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CHH28_RS16155 db862122b16f27cdfbc74829b1736701 463 Pfam PF02321 Outer membrane efflux protein 267 441 8.3E-20 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 Pfam PF03143 Elongation factor Tu C-terminal domain 311 405 2.6E-32 T 29-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 407 6.8E-216 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 Pfam PF00009 Elongation factor Tu GTP binding domain 10 214 6.2E-56 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.6E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.6E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.6E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.6E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.6E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 SUPERFAMILY SSF50465 311 406 3.45E-34 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 Gene3D G3DSA:3.40.50.300 2 74 7.5E-12 T 29-03-2018 CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 SUPERFAMILY SSF52540 5 227 3.25E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 407 58.357 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 SUPERFAMILY SSF50447 218 314 2.75E-29 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 142 7.6E-13 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 Pfam PF03144 Elongation factor Tu domain 2 238 306 8.2E-16 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 Gene3D G3DSA:3.40.50.300 75 216 5.4E-27 T 29-03-2018 CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 Gene3D G3DSA:2.40.30.10 219 312 6.1E-30 T 29-03-2018 CHH28_RS01795 6b676ea1ea7bbf4f828c598f0f13e9a7 407 Gene3D G3DSA:2.40.30.10 313 406 1.6E-31 T 29-03-2018 CHH28_RS00155 0b6440d2b591ea1205c6e157ff0c8947 362 Pfam PF03462 PCRF domain 13 205 3.4E-72 T 29-03-2018 IPR005139 Peptide chain release factor GO:0006415 CHH28_RS00155 0b6440d2b591ea1205c6e157ff0c8947 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.188 T 29-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CHH28_RS00155 0b6440d2b591ea1205c6e157ff0c8947 362 Pfam PF00472 RF-1 domain 215 323 2.9E-42 T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CHH28_RS00155 0b6440d2b591ea1205c6e157ff0c8947 362 Gene3D G3DSA:1.20.58.410 2 99 4.1E-16 T 29-03-2018 CHH28_RS00155 0b6440d2b591ea1205c6e157ff0c8947 362 SUPERFAMILY SSF75620 12 355 1.23E-135 T 29-03-2018 CHH28_RS00155 0b6440d2b591ea1205c6e157ff0c8947 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 7.9E-166 T 29-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CHH28_RS00155 0b6440d2b591ea1205c6e157ff0c8947 362 SMART SM00937 66 180 1.5E-63 T 29-03-2018 IPR005139 Peptide chain release factor GO:0006415 CHH28_RS00155 0b6440d2b591ea1205c6e157ff0c8947 362 Gene3D G3DSA:3.30.160.20 211 294 4.9E-34 T 29-03-2018 CHH28_RS00155 0b6440d2b591ea1205c6e157ff0c8947 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CHH28_RS16160 d9e301c257cc08590ff88f2e2db5f0c8 162 SUPERFAMILY SSF103039 1 152 3.01E-30 T 29-03-2018 IPR028976 CheC-like domain CHH28_RS16160 d9e301c257cc08590ff88f2e2db5f0c8 162 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 2.4E-18 T 29-03-2018 IPR028051 Chemotaxis phosphatase CheX-like domain CHH28_RS16160 d9e301c257cc08590ff88f2e2db5f0c8 162 Gene3D G3DSA:3.40.1550.10 1 152 2.0E-28 T 29-03-2018 IPR028976 CheC-like domain CHH28_RS05960 771454ef1b5cbbabee47f4a338f7ff15 144 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.1E-28 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal CHH28_RS05960 771454ef1b5cbbabee47f4a338f7ff15 144 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.566 T 29-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CHH28_RS05960 771454ef1b5cbbabee47f4a338f7ff15 144 SMART SM00649 9 141 1.3E-81 T 29-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CHH28_RS05960 771454ef1b5cbbabee47f4a338f7ff15 144 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 4.2E-65 T 29-03-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS05960 771454ef1b5cbbabee47f4a338f7ff15 144 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.4E-24 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CHH28_RS05960 771454ef1b5cbbabee47f4a338f7ff15 144 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-14 T 29-03-2018 CHH28_RS05960 771454ef1b5cbbabee47f4a338f7ff15 144 Gene3D G3DSA:3.30.1550.10 3 72 1.5E-34 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal CHH28_RS05960 771454ef1b5cbbabee47f4a338f7ff15 144 SUPERFAMILY SSF54747 3 73 1.27E-29 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal CHH28_RS05960 771454ef1b5cbbabee47f4a338f7ff15 144 Gene3D G3DSA:1.10.10.250 73 141 4.5E-23 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CHH28_RS05960 771454ef1b5cbbabee47f4a338f7ff15 144 SUPERFAMILY SSF46906 68 141 1.83E-25 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CHH28_RS18790 de79903318408422fc183406f6c4f090 910 Pfam PF08448 PAS fold 27 132 1.4E-9 T 29-03-2018 IPR013656 PAS fold-4 CHH28_RS18790 de79903318408422fc183406f6c4f090 910 SMART SM00091 142 207 240.0 T 29-03-2018 IPR000014 PAS domain CHH28_RS18790 de79903318408422fc183406f6c4f090 910 SMART SM00091 16 83 0.019 T 29-03-2018 IPR000014 PAS domain CHH28_RS18790 de79903318408422fc183406f6c4f090 910 SMART SM00091 273 338 62.0 T 29-03-2018 IPR000014 PAS domain CHH28_RS18790 de79903318408422fc183406f6c4f090 910 SMART SM00091 404 474 110.0 T 29-03-2018 IPR000014 PAS domain CHH28_RS18790 de79903318408422fc183406f6c4f090 910 Gene3D G3DSA:3.30.450.20 269 389 2.8E-9 T 29-03-2018 CHH28_RS18790 de79903318408422fc183406f6c4f090 910 Gene3D G3DSA:3.30.450.20 142 258 1.6E-8 T 29-03-2018 CHH28_RS18790 de79903318408422fc183406f6c4f090 910 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 137 4.4E-11 T 29-03-2018 IPR000014 PAS domain CHH28_RS18790 de79903318408422fc183406f6c4f090 910 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 638 667 2.6E-50 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS18790 de79903318408422fc183406f6c4f090 910 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 715 742 2.6E-50 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS18790 de79903318408422fc183406f6c4f090 910 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 744 773 2.6E-50 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS18790 de79903318408422fc183406f6c4f090 910 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 792 821 2.6E-50 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS18790 de79903318408422fc183406f6c4f090 910 SUPERFAMILY SSF58104 585 865 2.75E-73 T 29-03-2018 CHH28_RS18790 de79903318408422fc183406f6c4f090 910 SMART SM00283 617 864 3.5E-93 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS18790 de79903318408422fc183406f6c4f090 910 SUPERFAMILY SSF55785 27 130 4.36E-12 T 29-03-2018 IPR000014 PAS domain CHH28_RS18790 de79903318408422fc183406f6c4f090 910 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 676 832 2.1E-55 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS18790 de79903318408422fc183406f6c4f090 910 Pfam PF13426 PAS domain 287 387 0.18 T 29-03-2018 IPR000014 PAS domain CHH28_RS18790 de79903318408422fc183406f6c4f090 910 Pfam PF13426 PAS domain 418 519 0.054 T 29-03-2018 IPR000014 PAS domain CHH28_RS18790 de79903318408422fc183406f6c4f090 910 Gene3D G3DSA:1.20.1480.30 555 667 1.6E-4 T 29-03-2018 CHH28_RS18790 de79903318408422fc183406f6c4f090 910 Gene3D G3DSA:3.30.450.20 13 141 2.1E-16 T 29-03-2018 CHH28_RS18790 de79903318408422fc183406f6c4f090 910 Gene3D G3DSA:3.30.450.20 390 529 3.7E-11 T 29-03-2018 CHH28_RS18790 de79903318408422fc183406f6c4f090 910 Gene3D G3DSA:1.10.287.950 668 868 7.5E-50 T 29-03-2018 CHH28_RS18280 b330d1937dba40afa1736987907a1fd4 401 Pfam PF14870 Photosynthesis system II assembly factor YCF48 49 129 1.6E-8 T 29-03-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain CHH28_RS18280 b330d1937dba40afa1736987907a1fd4 401 Pfam PF14870 Photosynthesis system II assembly factor YCF48 193 273 4.4E-8 T 29-03-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain CHH28_RS18280 b330d1937dba40afa1736987907a1fd4 401 SUPERFAMILY SSF50939 53 141 3.73E-40 T 29-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CHH28_RS18280 b330d1937dba40afa1736987907a1fd4 401 SUPERFAMILY SSF50939 196 380 3.73E-40 T 29-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CHH28_RS18280 b330d1937dba40afa1736987907a1fd4 401 Gene3D G3DSA:2.130.10.10 16 380 2.7E-34 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS03010 363209bda22d70f381de93bf2099dd9a 887 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 683 789 1.0E-17 T 29-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS03010 363209bda22d70f381de93bf2099dd9a 887 Gene3D G3DSA:3.30.310.50 795 885 1.4E-12 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS03010 363209bda22d70f381de93bf2099dd9a 887 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 816 876 1.3E-7 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS03010 363209bda22d70f381de93bf2099dd9a 887 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 524 533 - T 29-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS03010 363209bda22d70f381de93bf2099dd9a 887 SUPERFAMILY SSF53738 682 785 5.1E-29 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS03010 363209bda22d70f381de93bf2099dd9a 887 Gene3D G3DSA:3.40.120.10 578 685 9.9E-33 T 29-03-2018 CHH28_RS03010 363209bda22d70f381de93bf2099dd9a 887 Gene3D G3DSA:3.40.120.10 686 793 2.3E-23 T 29-03-2018 CHH28_RS03010 363209bda22d70f381de93bf2099dd9a 887 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 581 678 1.4E-25 T 29-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS03010 363209bda22d70f381de93bf2099dd9a 887 SUPERFAMILY SSF53738 431 565 6.28E-34 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS03010 363209bda22d70f381de93bf2099dd9a 887 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 595 614 3.3E-24 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS03010 363209bda22d70f381de93bf2099dd9a 887 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 629 642 3.3E-24 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS03010 363209bda22d70f381de93bf2099dd9a 887 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 523 537 3.3E-24 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS03010 363209bda22d70f381de93bf2099dd9a 887 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 658 673 3.3E-24 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS03010 363209bda22d70f381de93bf2099dd9a 887 SUPERFAMILY SSF53738 580 680 3.45E-30 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS03010 363209bda22d70f381de93bf2099dd9a 887 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 435 559 1.2E-29 T 29-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS03010 363209bda22d70f381de93bf2099dd9a 887 SUPERFAMILY SSF55957 793 887 4.88E-18 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CHH28_RS03010 363209bda22d70f381de93bf2099dd9a 887 Gene3D G3DSA:3.40.120.10 425 576 1.5E-33 T 29-03-2018 CHH28_RS03005 1cbaca9e6d04b53c623a6d8127d523cd 156 TIGRFAM TIGR00576 dut: dUTP diphosphatase 17 155 7.1E-49 T 29-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 CHH28_RS03005 1cbaca9e6d04b53c623a6d8127d523cd 156 Gene3D G3DSA:2.70.40.10 121 155 2.1E-14 T 29-03-2018 CHH28_RS03005 1cbaca9e6d04b53c623a6d8127d523cd 156 SUPERFAMILY SSF51283 10 155 3.93E-54 T 29-03-2018 IPR029054 dUTPase-like CHH28_RS03005 1cbaca9e6d04b53c623a6d8127d523cd 156 Gene3D G3DSA:2.70.40.10 9 120 3.8E-38 T 29-03-2018 CHH28_RS03005 1cbaca9e6d04b53c623a6d8127d523cd 156 Pfam PF00692 dUTPase 21 154 5.2E-41 T 29-03-2018 IPR029054 dUTPase-like CHH28_RS03005 1cbaca9e6d04b53c623a6d8127d523cd 156 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 11 155 33.61 T 29-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 CHH28_RS08285 296395590d83a54f7ff6ac12cd522501 346 Pfam PF13450 NAD(P)-binding Rossmann-like domain 26 86 2.3E-11 T 29-03-2018 CHH28_RS08285 296395590d83a54f7ff6ac12cd522501 346 Gene3D G3DSA:3.90.660.10 76 301 3.6E-51 T 29-03-2018 CHH28_RS08285 296395590d83a54f7ff6ac12cd522501 346 Gene3D G3DSA:3.50.50.60 4 75 9.1E-5 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS08285 296395590d83a54f7ff6ac12cd522501 346 SUPERFAMILY SSF51905 294 343 8.26E-30 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS08285 296395590d83a54f7ff6ac12cd522501 346 SUPERFAMILY SSF51905 22 215 8.26E-30 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS08285 296395590d83a54f7ff6ac12cd522501 346 Pfam PF01593 Flavin containing amine oxidoreductase 130 342 1.1E-7 T 29-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CHH28_RS18345 a7b5cf3368c3029e6b1e3263bb45c792 86 Gene3D G3DSA:3.40.30.10 5 86 1.2E-7 T 29-03-2018 CHH28_RS18345 a7b5cf3368c3029e6b1e3263bb45c792 86 Pfam PF05768 Glutaredoxin-like domain (DUF836) 4 75 3.2E-13 T 29-03-2018 IPR008554 Glutaredoxin-like CHH28_RS18345 a7b5cf3368c3029e6b1e3263bb45c792 86 SUPERFAMILY SSF52833 5 79 3.36E-11 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS03360 672d3629b1afe4231738757d7252d5a4 468 SUPERFAMILY SSF54368 2 99 3.79E-36 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CHH28_RS03360 672d3629b1afe4231738757d7252d5a4 468 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 13 94 3.4E-30 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CHH28_RS03360 672d3629b1afe4231738757d7252d5a4 468 Gene3D G3DSA:3.30.590.10 104 456 2.3E-120 T 29-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CHH28_RS03360 672d3629b1afe4231738757d7252d5a4 468 SUPERFAMILY SSF55931 101 467 3.63E-140 T 29-03-2018 CHH28_RS03360 672d3629b1afe4231738757d7252d5a4 468 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 258 273 - T 29-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CHH28_RS03360 672d3629b1afe4231738757d7252d5a4 468 Pfam PF00120 Glutamine synthetase, catalytic domain 101 465 3.5E-140 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CHH28_RS03360 672d3629b1afe4231738757d7252d5a4 468 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 467 1.1E-208 T 29-03-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CHH28_RS03360 672d3629b1afe4231738757d7252d5a4 468 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 385 397 - T 29-03-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CHH28_RS03360 672d3629b1afe4231738757d7252d5a4 468 ProSitePatterns PS00180 Glutamine synthetase signature 1. 49 67 - T 29-03-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CHH28_RS03360 672d3629b1afe4231738757d7252d5a4 468 Gene3D G3DSA:3.10.20.70 1 103 8.9E-27 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CHH28_RS03360 672d3629b1afe4231738757d7252d5a4 468 SMART SM01230 101 378 3.8E-153 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CHH28_RS00665 aa5e601db24510d50f7fcf1134b48f19 157 SUPERFAMILY SSF55826 2 155 3.27E-43 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CHH28_RS00665 aa5e601db24510d50f7fcf1134b48f19 157 PIRSF PIRSF006181 1 157 3.9E-51 T 29-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CHH28_RS00665 aa5e601db24510d50f7fcf1134b48f19 157 Pfam PF04073 Aminoacyl-tRNA editing domain 32 146 6.1E-26 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CHH28_RS00665 aa5e601db24510d50f7fcf1134b48f19 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 155 2.6E-55 T 29-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CHH28_RS00665 aa5e601db24510d50f7fcf1134b48f19 157 Gene3D G3DSA:3.90.960.10 1 157 8.8E-42 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CHH28_RS19475 d19f83c30c7c90408d646cc820e9468c 220 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 21 102 9.2E-18 T 29-03-2018 IPR010239 Conserved hypothetical protein CHP02001 CHH28_RS19475 d19f83c30c7c90408d646cc820e9468c 220 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 5 220 3.8E-22 T 29-03-2018 IPR010239 Conserved hypothetical protein CHP02001 CHH28_RS16330 351f37f0c519bbdfd44fa5547f791007 222 Pfam PF14470 Bacterial PH domain 52 150 6.1E-7 T 29-03-2018 CHH28_RS16330 351f37f0c519bbdfd44fa5547f791007 222 Pfam PF09851 Short C-terminal domain 194 220 2.6E-6 T 29-03-2018 IPR018649 SHOCT domain CHH28_RS00920 76437b3779b6c7f02858a9f0c4b76150 142 Gene3D G3DSA:3.90.79.10 7 141 1.4E-17 T 29-03-2018 CHH28_RS00920 76437b3779b6c7f02858a9f0c4b76150 142 Pfam PF00293 NUDIX domain 22 104 2.0E-13 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CHH28_RS00920 76437b3779b6c7f02858a9f0c4b76150 142 SUPERFAMILY SSF55811 15 138 8.8E-18 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CHH28_RS04405 a5f1042852e492ba4fcafc31338f2d67 367 SUPERFAMILY SSF55979 127 245 1.88E-29 T 29-03-2018 CHH28_RS04405 a5f1042852e492ba4fcafc31338f2d67 367 Gene3D G3DSA:3.10.150.10 125 248 8.8E-33 T 29-03-2018 CHH28_RS04405 a5f1042852e492ba4fcafc31338f2d67 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 4.8E-39 T 29-03-2018 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS04405 a5f1042852e492ba4fcafc31338f2d67 367 SMART SM00480 17 363 1.0E-135 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS04405 a5f1042852e492ba4fcafc31338f2d67 367 Gene3D G3DSA:3.10.150.10 1 123 5.7E-31 T 29-03-2018 CHH28_RS04405 a5f1042852e492ba4fcafc31338f2d67 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 366 1.5E-36 T 29-03-2018 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS04405 a5f1042852e492ba4fcafc31338f2d67 367 SUPERFAMILY SSF55979 1 118 9.42E-30 T 29-03-2018 CHH28_RS04405 a5f1042852e492ba4fcafc31338f2d67 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 244 9.5E-35 T 29-03-2018 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS04405 a5f1042852e492ba4fcafc31338f2d67 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 367 9.4E-109 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS04405 a5f1042852e492ba4fcafc31338f2d67 367 PIRSF PIRSF000804 1 367 7.4E-121 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS04405 a5f1042852e492ba4fcafc31338f2d67 367 Gene3D G3DSA:3.10.150.10 249 367 2.6E-26 T 29-03-2018 CHH28_RS04405 a5f1042852e492ba4fcafc31338f2d67 367 SUPERFAMILY SSF55979 247 367 4.66E-36 T 29-03-2018 CHH28_RS05470 7c2d7f35493b40f8e3030fd93d02749e 326 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 16 160 3.4E-40 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CHH28_RS05470 7c2d7f35493b40f8e3030fd93d02749e 326 Gene3D G3DSA:3.40.50.1370 1 160 1.5E-49 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS05470 7c2d7f35493b40f8e3030fd93d02749e 326 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 15 318 40.792 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CHH28_RS05470 7c2d7f35493b40f8e3030fd93d02749e 326 SUPERFAMILY SSF53671 14 318 8.9E-93 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS05470 7c2d7f35493b40f8e3030fd93d02749e 326 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 62 69 - T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS05470 7c2d7f35493b40f8e3030fd93d02749e 326 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 168 314 2.4E-24 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CHH28_RS05470 7c2d7f35493b40f8e3030fd93d02749e 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 62 81 1.6E-18 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS05470 7c2d7f35493b40f8e3030fd93d02749e 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 278 1.6E-18 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS05470 7c2d7f35493b40f8e3030fd93d02749e 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 148 159 1.6E-18 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS05470 7c2d7f35493b40f8e3030fd93d02749e 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 281 304 1.6E-18 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS05470 7c2d7f35493b40f8e3030fd93d02749e 326 Gene3D G3DSA:3.40.50.1370 161 322 4.9E-53 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS05470 7c2d7f35493b40f8e3030fd93d02749e 326 PRINTS PR00101 Aspartate carbamoyltransferase signature 52 74 1.2E-29 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CHH28_RS05470 7c2d7f35493b40f8e3030fd93d02749e 326 PRINTS PR00101 Aspartate carbamoyltransferase signature 232 241 1.2E-29 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CHH28_RS05470 7c2d7f35493b40f8e3030fd93d02749e 326 PRINTS PR00101 Aspartate carbamoyltransferase signature 90 99 1.2E-29 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CHH28_RS05470 7c2d7f35493b40f8e3030fd93d02749e 326 PRINTS PR00101 Aspartate carbamoyltransferase signature 297 311 1.2E-29 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CHH28_RS05470 7c2d7f35493b40f8e3030fd93d02749e 326 PRINTS PR00101 Aspartate carbamoyltransferase signature 147 164 1.2E-29 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CHH28_RS05470 7c2d7f35493b40f8e3030fd93d02749e 326 PRINTS PR00101 Aspartate carbamoyltransferase signature 273 278 1.2E-29 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CHH28_RS05470 7c2d7f35493b40f8e3030fd93d02749e 326 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 16 316 1.5E-92 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CHH28_RS05955 8826782019ea6434b96cd6383677f60b 178 Gene3D G3DSA:2.30.30.30 119 177 2.5E-19 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CHH28_RS05955 8826782019ea6434b96cd6383677f60b 178 Pfam PF02357 Transcription termination factor nusG 3 108 2.4E-28 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CHH28_RS05955 8826782019ea6434b96cd6383677f60b 178 Gene3D G3DSA:3.30.70.940 2 114 1.7E-44 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CHH28_RS05955 8826782019ea6434b96cd6383677f60b 178 SMART SM00739 123 150 7.2E-6 T 29-03-2018 IPR005824 KOW CHH28_RS05955 8826782019ea6434b96cd6383677f60b 178 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 24.297 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CHH28_RS05955 8826782019ea6434b96cd6383677f60b 178 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 4.2E-19 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CHH28_RS05955 8826782019ea6434b96cd6383677f60b 178 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 4.2E-19 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CHH28_RS05955 8826782019ea6434b96cd6383677f60b 178 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 4.2E-19 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CHH28_RS05955 8826782019ea6434b96cd6383677f60b 178 Pfam PF00467 KOW motif 126 160 1.9E-8 T 29-03-2018 IPR005824 KOW CHH28_RS05955 8826782019ea6434b96cd6383677f60b 178 SUPERFAMILY SSF50104 121 176 1.58E-18 T 29-03-2018 IPR008991 Translation protein SH3-like domain CHH28_RS05955 8826782019ea6434b96cd6383677f60b 178 SUPERFAMILY SSF82679 3 114 2.09E-41 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CHH28_RS05955 8826782019ea6434b96cd6383677f60b 178 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 29-03-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CHH28_RS05955 8826782019ea6434b96cd6383677f60b 178 SMART SM00738 2 111 1.8E-50 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CHH28_RS05955 8826782019ea6434b96cd6383677f60b 178 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 2.6E-70 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CHH28_RS17490 7cc809951029f854632f459ae4b8dc1f 233 Pfam PF08241 Methyltransferase domain 72 170 1.2E-17 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CHH28_RS17490 7cc809951029f854632f459ae4b8dc1f 233 SUPERFAMILY SSF53335 34 215 4.06E-35 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS17490 7cc809951029f854632f459ae4b8dc1f 233 Gene3D G3DSA:3.40.50.150 19 222 2.9E-34 T 29-03-2018 CHH28_RS12750 768bed40aedaf3919b07cd75b5f55fc9 202 Gene3D G3DSA:3.40.1550.10 2 199 1.9E-32 T 29-03-2018 IPR028976 CheC-like domain CHH28_RS12750 768bed40aedaf3919b07cd75b5f55fc9 202 SUPERFAMILY SSF103039 6 199 4.84E-41 T 29-03-2018 IPR028976 CheC-like domain CHH28_RS11050 248085da1e07c2ee2e7e20022a6b2ae9 141 Gene3D G3DSA:3.40.630.30 12 137 1.7E-13 T 29-03-2018 CHH28_RS11050 248085da1e07c2ee2e7e20022a6b2ae9 141 SUPERFAMILY SSF55729 33 121 1.95E-15 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS11050 248085da1e07c2ee2e7e20022a6b2ae9 141 Pfam PF13673 Acetyltransferase (GNAT) domain 32 112 5.5E-8 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS07305 ea7faa25343e080d60b832d3973cf24d 999 Gene3D G3DSA:3.20.20.140 269 699 1.3E-47 T 29-03-2018 CHH28_RS07305 ea7faa25343e080d60b832d3973cf24d 999 SUPERFAMILY SSF50370 734 864 1.53E-24 T 29-03-2018 IPR000772 Ricin B, lectin domain CHH28_RS07305 ea7faa25343e080d60b832d3973cf24d 999 Pfam PF00652 Ricin-type beta-trefoil lectin domain 873 994 4.2E-16 T 29-03-2018 IPR000772 Ricin B, lectin domain CHH28_RS07305 ea7faa25343e080d60b832d3973cf24d 999 Pfam PF00652 Ricin-type beta-trefoil lectin domain 736 862 2.7E-20 T 29-03-2018 IPR000772 Ricin B, lectin domain CHH28_RS07305 ea7faa25343e080d60b832d3973cf24d 999 SUPERFAMILY SSF50370 832 955 5.78E-20 T 29-03-2018 IPR000772 Ricin B, lectin domain CHH28_RS07305 ea7faa25343e080d60b832d3973cf24d 999 Gene3D G3DSA:2.80.10.50 12 137 0.048 T 29-03-2018 CHH28_RS07305 ea7faa25343e080d60b832d3973cf24d 999 Gene3D G3DSA:2.80.10.50 728 773 6.2E-8 T 29-03-2018 CHH28_RS07305 ea7faa25343e080d60b832d3973cf24d 999 Gene3D G3DSA:2.80.10.50 871 998 3.9E-21 T 29-03-2018 CHH28_RS07305 ea7faa25343e080d60b832d3973cf24d 999 SUPERFAMILY SSF51556 515 652 2.21E-27 T 29-03-2018 IPR032466 Metal-dependent hydrolase CHH28_RS07305 ea7faa25343e080d60b832d3973cf24d 999 SUPERFAMILY SSF51556 276 458 2.21E-27 T 29-03-2018 IPR032466 Metal-dependent hydrolase CHH28_RS07305 ea7faa25343e080d60b832d3973cf24d 999 Gene3D G3DSA:2.80.10.50 774 865 2.2E-19 T 29-03-2018 CHH28_RS07305 ea7faa25343e080d60b832d3973cf24d 999 SMART SM00458 870 997 2.4E-20 T 29-03-2018 IPR000772 Ricin B, lectin domain CHH28_RS07305 ea7faa25343e080d60b832d3973cf24d 999 SMART SM00458 734 865 4.8E-20 T 29-03-2018 IPR000772 Ricin B, lectin domain CHH28_RS18570 2922a2ab25c58759761753df2c66623e 321 Gene3D G3DSA:3.40.50.1370 179 319 2.0E-50 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS18570 2922a2ab25c58759761753df2c66623e 321 PRINTS PR00102 Ornithine carbamoyltransferase signature 98 111 2.0E-30 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS18570 2922a2ab25c58759761753df2c66623e 321 PRINTS PR00102 Ornithine carbamoyltransferase signature 138 152 2.0E-30 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS18570 2922a2ab25c58759761753df2c66623e 321 PRINTS PR00102 Ornithine carbamoyltransferase signature 296 307 2.0E-30 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS18570 2922a2ab25c58759761753df2c66623e 321 PRINTS PR00102 Ornithine carbamoyltransferase signature 65 79 2.0E-30 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS18570 2922a2ab25c58759761753df2c66623e 321 PRINTS PR00102 Ornithine carbamoyltransferase signature 234 244 2.0E-30 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS18570 2922a2ab25c58759761753df2c66623e 321 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 67 74 - T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS18570 2922a2ab25c58759761753df2c66623e 321 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 21 318 77.768 T 29-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CHH28_RS18570 2922a2ab25c58759761753df2c66623e 321 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 22 317 3.3E-116 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS18570 2922a2ab25c58759761753df2c66623e 321 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 67 86 3.2E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS18570 2922a2ab25c58759761753df2c66623e 321 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 149 160 3.2E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS18570 2922a2ab25c58759761753df2c66623e 321 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 279 3.2E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS18570 2922a2ab25c58759761753df2c66623e 321 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 282 305 3.2E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS18570 2922a2ab25c58759761753df2c66623e 321 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 22 162 7.7E-52 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CHH28_RS18570 2922a2ab25c58759761753df2c66623e 321 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 168 315 1.3E-50 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CHH28_RS18570 2922a2ab25c58759761753df2c66623e 321 SUPERFAMILY SSF53671 21 318 7.59E-106 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS18570 2922a2ab25c58759761753df2c66623e 321 Gene3D G3DSA:3.40.50.1370 20 178 1.5E-63 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS02945 7f3326aee33f8ddd3dc9adeee401ed79 451 Gene3D G3DSA:1.10.10.60 144 210 6.6E-10 T 29-03-2018 CHH28_RS02945 7f3326aee33f8ddd3dc9adeee401ed79 451 Pfam PF02805 Metal binding domain of Ada 13 76 7.7E-29 T 29-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 CHH28_RS02945 7f3326aee33f8ddd3dc9adeee401ed79 451 Pfam PF12833 Helix-turn-helix domain 111 189 2.0E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS02945 7f3326aee33f8ddd3dc9adeee401ed79 451 Gene3D G3DSA:3.40.10.10 2 78 1.7E-24 T 29-03-2018 IPR035451 Ada-like domain CHH28_RS02945 7f3326aee33f8ddd3dc9adeee401ed79 451 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 142 184 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CHH28_RS02945 7f3326aee33f8ddd3dc9adeee401ed79 451 SUPERFAMILY SSF46689 91 138 1.61E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS02945 7f3326aee33f8ddd3dc9adeee401ed79 451 SUPERFAMILY SSF57884 8 91 2.62E-32 T 29-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 CHH28_RS02945 7f3326aee33f8ddd3dc9adeee401ed79 451 SMART SM01009 199 311 6.7E-34 T 29-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CHH28_RS02945 7f3326aee33f8ddd3dc9adeee401ed79 451 SUPERFAMILY SSF55945 200 293 2.35E-22 T 29-03-2018 CHH28_RS02945 7f3326aee33f8ddd3dc9adeee401ed79 451 SUPERFAMILY SSF48150 302 449 4.19E-23 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CHH28_RS02945 7f3326aee33f8ddd3dc9adeee401ed79 451 Gene3D G3DSA:1.10.10.60 88 143 5.2E-8 T 29-03-2018 CHH28_RS02945 7f3326aee33f8ddd3dc9adeee401ed79 451 Gene3D G3DSA:1.10.340.30 298 436 1.2E-19 T 29-03-2018 CHH28_RS02945 7f3326aee33f8ddd3dc9adeee401ed79 451 Pfam PF06029 AlkA N-terminal domain 200 311 1.1E-29 T 29-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CHH28_RS02945 7f3326aee33f8ddd3dc9adeee401ed79 451 Gene3D G3DSA:3.30.310.20 211 297 3.1E-26 T 29-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CHH28_RS02945 7f3326aee33f8ddd3dc9adeee401ed79 451 SMART SM00342 105 188 6.0E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS02945 7f3326aee33f8ddd3dc9adeee401ed79 451 SUPERFAMILY SSF46689 143 192 1.39E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS03380 3e68507adb2e7702c75ada91b98b3534 132 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 4 128 1.3E-33 T 29-03-2018 IPR019231 Protein of unknown function DUF2170 CHH28_RS01965 de485d133f72aeb6f7c45b402c7951f5 509 SUPERFAMILY SSF53756 215 475 1.48E-38 T 29-03-2018 CHH28_RS01965 de485d133f72aeb6f7c45b402c7951f5 509 Gene3D G3DSA:3.40.50.2000 279 506 2.8E-26 T 29-03-2018 CHH28_RS01965 de485d133f72aeb6f7c45b402c7951f5 509 Pfam PF00534 Glycosyl transferases group 1 332 477 7.7E-23 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CHH28_RS07440 a0512d0dc24c7958a99ca3895698af6a 556 Pfam PF00501 AMP-binding enzyme 25 454 3.0E-111 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CHH28_RS07440 a0512d0dc24c7958a99ca3895698af6a 556 ProSitePatterns PS00455 Putative AMP-binding domain signature. 204 215 - T 29-03-2018 IPR020845 AMP-binding, conserved site CHH28_RS07440 a0512d0dc24c7958a99ca3895698af6a 556 Gene3D G3DSA:2.30.38.10 364 447 5.9E-28 T 29-03-2018 CHH28_RS07440 a0512d0dc24c7958a99ca3895698af6a 556 Gene3D G3DSA:3.30.300.30 449 553 2.2E-29 T 29-03-2018 CHH28_RS07440 a0512d0dc24c7958a99ca3895698af6a 556 Gene3D G3DSA:3.40.50.980 17 209 1.9E-43 T 29-03-2018 CHH28_RS07440 a0512d0dc24c7958a99ca3895698af6a 556 SUPERFAMILY SSF56801 15 548 7.06E-165 T 29-03-2018 CHH28_RS07440 a0512d0dc24c7958a99ca3895698af6a 556 Pfam PF13193 AMP-binding enzyme C-terminal domain 463 538 2.6E-19 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CHH28_RS07440 a0512d0dc24c7958a99ca3895698af6a 556 Gene3D G3DSA:3.40.50.980 210 363 4.0E-53 T 29-03-2018 CHH28_RS05800 84b04f81c5509fe8bdb7151cf2f7432a 590 Pfam PF00654 Voltage gated chloride channel 97 430 1.7E-76 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CHH28_RS05800 84b04f81c5509fe8bdb7151cf2f7432a 590 SUPERFAMILY SSF81340 27 435 4.71E-87 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CHH28_RS05800 84b04f81c5509fe8bdb7151cf2f7432a 590 PRINTS PR00762 Chloride channel signature 381 397 2.5E-18 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CHH28_RS05800 84b04f81c5509fe8bdb7151cf2f7432a 590 PRINTS PR00762 Chloride channel signature 399 418 2.5E-18 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CHH28_RS05800 84b04f81c5509fe8bdb7151cf2f7432a 590 PRINTS PR00762 Chloride channel signature 186 205 2.5E-18 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CHH28_RS05800 84b04f81c5509fe8bdb7151cf2f7432a 590 PRINTS PR00762 Chloride channel signature 135 154 2.5E-18 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CHH28_RS05800 84b04f81c5509fe8bdb7151cf2f7432a 590 Gene3D G3DSA:1.10.3080.10 22 453 1.0E-80 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CHH28_RS01310 78fdf767a1de7d82b5e22466ec83b3a6 146 Gene3D G3DSA:3.30.160.20 10 146 5.5E-38 T 29-03-2018 CHH28_RS01310 78fdf767a1de7d82b5e22466ec83b3a6 146 Pfam PF00472 RF-1 domain 16 140 1.5E-23 T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CHH28_RS01310 78fdf767a1de7d82b5e22466ec83b3a6 146 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 29 45 - T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CHH28_RS01310 78fdf767a1de7d82b5e22466ec83b3a6 146 SUPERFAMILY SSF75620 14 117 3.37E-13 T 29-03-2018 CHH28_RS06095 e15cc2f3157f3db8735670c93fc8299f 116 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 116 1.9E-40 T 29-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06095 e15cc2f3157f3db8735670c93fc8299f 116 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 116 25.912 T 29-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06095 e15cc2f3157f3db8735670c93fc8299f 116 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 116 4.1E-41 T 29-03-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06095 e15cc2f3157f3db8735670c93fc8299f 116 SUPERFAMILY SSF53137 4 114 8.5E-48 T 29-03-2018 CHH28_RS06095 e15cc2f3157f3db8735670c93fc8299f 116 Gene3D G3DSA:3.30.420.100 1 116 3.7E-36 T 29-03-2018 CHH28_RS00575 cd2ab6734961f280d30524b7b42f1ddc 102 SUPERFAMILY SSF54285 4 81 1.09E-21 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CHH28_RS00575 cd2ab6734961f280d30524b7b42f1ddc 102 Hamap MF_00460 Protein RnfH [rnfH]. 5 97 24.507 T 29-03-2018 IPR005346 RnfH protein CHH28_RS00575 cd2ab6734961f280d30524b7b42f1ddc 102 Gene3D G3DSA:3.10.20.280 1 90 8.0E-31 T 29-03-2018 IPR005346 RnfH protein CHH28_RS00575 cd2ab6734961f280d30524b7b42f1ddc 102 Pfam PF03658 RnfH family Ubiquitin 6 88 1.9E-31 T 29-03-2018 IPR005346 RnfH protein CHH28_RS14900 75371f7b112158ab8805c68b20e3e1ad 177 Pfam PF02620 Uncharacterized ACR, COG1399 66 175 5.7E-22 T 29-03-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CHH28_RS02705 e6bc61b558b040a3d828ef824b18af12 139 SUPERFAMILY SSF55729 17 134 7.15E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS02705 e6bc61b558b040a3d828ef824b18af12 139 Gene3D G3DSA:3.40.630.30 11 138 1.1E-25 T 29-03-2018 CHH28_RS02705 e6bc61b558b040a3d828ef824b18af12 139 Pfam PF00583 Acetyltransferase (GNAT) family 27 111 1.1E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS14325 e64f8c6615b623b08013151ed4ff8d72 426 PIRSF PIRSF001529 1 426 2.7E-167 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CHH28_RS14325 e64f8c6615b623b08013151ed4ff8d72 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 38.642 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CHH28_RS14325 e64f8c6615b623b08013151ed4ff8d72 426 SUPERFAMILY SSF55681 117 420 1.68E-96 T 29-03-2018 CHH28_RS14325 e64f8c6615b623b08013151ed4ff8d72 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 224 402 2.3E-33 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS14325 e64f8c6615b623b08013151ed4ff8d72 426 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 2.6E-32 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CHH28_RS14325 e64f8c6615b623b08013151ed4ff8d72 426 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 2.6E-32 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CHH28_RS14325 e64f8c6615b623b08013151ed4ff8d72 426 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 2.6E-32 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CHH28_RS14325 e64f8c6615b623b08013151ed4ff8d72 426 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 2.6E-32 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CHH28_RS14325 e64f8c6615b623b08013151ed4ff8d72 426 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 2.6E-32 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CHH28_RS14325 e64f8c6615b623b08013151ed4ff8d72 426 SUPERFAMILY SSF46589 1 113 8.89E-22 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 CHH28_RS14325 e64f8c6615b623b08013151ed4ff8d72 426 Gene3D G3DSA:3.30.930.10 106 426 3.8E-92 T 29-03-2018 CHH28_RS14325 e64f8c6615b623b08013151ed4ff8d72 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 8.7E-23 T 29-03-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 CHH28_RS14325 e64f8c6615b623b08013151ed4ff8d72 426 Gene3D G3DSA:1.10.287.40 2 105 1.2E-19 T 29-03-2018 CHH28_RS14325 e64f8c6615b623b08013151ed4ff8d72 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 419 5.2E-156 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CHH28_RS03265 3edce357ee15940c51f804f6efcafe47 181 Pfam PF05951 Bacterial protein of unknown function (DUF882) 31 179 2.9E-54 T 29-03-2018 IPR010275 Protein of unknown function DUF882 CHH28_RS03265 3edce357ee15940c51f804f6efcafe47 181 SUPERFAMILY SSF55166 64 179 1.15E-29 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CHH28_RS03265 3edce357ee15940c51f804f6efcafe47 181 Gene3D G3DSA:3.30.1380.10 54 181 1.6E-24 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CHH28_RS15975 6f8ebafeae0f9ed2e73f3203e17ead9b 192 SUPERFAMILY SSF55120 11 165 1.47E-37 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS15975 6f8ebafeae0f9ed2e73f3203e17ead9b 192 Pfam PF00849 RNA pseudouridylate synthase 20 131 6.6E-22 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS15975 6f8ebafeae0f9ed2e73f3203e17ead9b 192 Gene3D G3DSA:3.30.2350.10 2 186 5.8E-37 T 29-03-2018 CHH28_RS15975 6f8ebafeae0f9ed2e73f3203e17ead9b 192 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 24 38 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS01880 59e697dd68ab7fe522cbb35565c6a177 651 Pfam PF02719 Polysaccharide biosynthesis protein 288 581 5.3E-125 T 29-03-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CHH28_RS01880 59e697dd68ab7fe522cbb35565c6a177 651 Pfam PF13727 CoA-binding domain 66 215 9.1E-8 T 29-03-2018 CHH28_RS01880 59e697dd68ab7fe522cbb35565c6a177 651 SUPERFAMILY SSF51735 287 558 3.01E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS01880 59e697dd68ab7fe522cbb35565c6a177 651 Gene3D G3DSA:3.40.50.720 281 618 6.2E-61 T 29-03-2018 CHH28_RS01880 59e697dd68ab7fe522cbb35565c6a177 651 SUPERFAMILY SSF51735 142 274 8.07E-6 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS01880 59e697dd68ab7fe522cbb35565c6a177 651 Gene3D G3DSA:3.40.50.720 137 269 3.2E-16 T 29-03-2018 CHH28_RS15615 01446ee80041fac1ac63d9b7260c7780 387 Gene3D G3DSA:3.30.470.20 96 239 2.6E-54 T 29-03-2018 CHH28_RS15615 01446ee80041fac1ac63d9b7260c7780 387 SUPERFAMILY SSF56059 1 238 1.21E-82 T 29-03-2018 CHH28_RS15615 01446ee80041fac1ac63d9b7260c7780 387 Pfam PF00549 CoA-ligase 262 382 4.1E-24 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CHH28_RS15615 01446ee80041fac1ac63d9b7260c7780 387 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 44.134 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CHH28_RS15615 01446ee80041fac1ac63d9b7260c7780 387 Gene3D G3DSA:3.30.1490.20 21 95 1.8E-25 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CHH28_RS15615 01446ee80041fac1ac63d9b7260c7780 387 Pfam PF08442 ATP-grasp domain 2 203 6.5E-84 T 29-03-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CHH28_RS15615 01446ee80041fac1ac63d9b7260c7780 387 PIRSF PIRSF001554 1 387 2.4E-155 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CHH28_RS15615 01446ee80041fac1ac63d9b7260c7780 387 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.3E-176 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CHH28_RS15615 01446ee80041fac1ac63d9b7260c7780 387 Gene3D G3DSA:3.40.50.261 240 385 1.3E-41 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CHH28_RS15615 01446ee80041fac1ac63d9b7260c7780 387 SUPERFAMILY SSF52210 240 384 2.62E-52 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CHH28_RS15615 01446ee80041fac1ac63d9b7260c7780 387 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 29-03-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CHH28_RS05020 24a59d14cebbb0c9bea91c4b7a8cfd10 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.7E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS05020 24a59d14cebbb0c9bea91c4b7a8cfd10 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.7E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS05020 24a59d14cebbb0c9bea91c4b7a8cfd10 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.7E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS05020 24a59d14cebbb0c9bea91c4b7a8cfd10 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.7E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS05020 24a59d14cebbb0c9bea91c4b7a8cfd10 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.7E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS05020 24a59d14cebbb0c9bea91c4b7a8cfd10 276 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 181 0.0093 T 29-03-2018 CHH28_RS05020 24a59d14cebbb0c9bea91c4b7a8cfd10 276 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CHH28_RS05020 24a59d14cebbb0c9bea91c4b7a8cfd10 276 Pfam PF00106 short chain dehydrogenase 2 191 3.4E-51 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS05020 24a59d14cebbb0c9bea91c4b7a8cfd10 276 SUPERFAMILY SSF51735 2 262 8.78E-67 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS05020 24a59d14cebbb0c9bea91c4b7a8cfd10 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.1E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS05020 24a59d14cebbb0c9bea91c4b7a8cfd10 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.1E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS05020 24a59d14cebbb0c9bea91c4b7a8cfd10 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.1E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS05020 24a59d14cebbb0c9bea91c4b7a8cfd10 276 Gene3D G3DSA:3.40.50.720 1 233 3.7E-57 T 29-03-2018 CHH28_RS04945 1fb6fef5d9777e8c6657e45ac311874a 199 SUPERFAMILY SSF46626 16 98 6.84E-23 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS04945 1fb6fef5d9777e8c6657e45ac311874a 199 PRINTS PR00605 Class IC cytochrome C signature 173 195 5.3E-5 T 29-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CHH28_RS04945 1fb6fef5d9777e8c6657e45ac311874a 199 PRINTS PR00605 Class IC cytochrome C signature 31 42 5.3E-5 T 29-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CHH28_RS04945 1fb6fef5d9777e8c6657e45ac311874a 199 Pfam PF00034 Cytochrome c 114 198 7.0E-7 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS04945 1fb6fef5d9777e8c6657e45ac311874a 199 Pfam PF00034 Cytochrome c 23 94 2.6E-9 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS04945 1fb6fef5d9777e8c6657e45ac311874a 199 Gene3D G3DSA:1.10.760.10 15 97 1.4E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS04945 1fb6fef5d9777e8c6657e45ac311874a 199 Gene3D G3DSA:1.10.760.10 98 197 2.9E-23 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS04945 1fb6fef5d9777e8c6657e45ac311874a 199 SUPERFAMILY SSF46626 106 197 2.51E-19 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS04945 1fb6fef5d9777e8c6657e45ac311874a 199 PIRSF PIRSF000005 1 199 4.7E-61 T 29-03-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 CHH28_RS00900 6f86167b15028eb9fcf2a2a6d2eb650d 450 SUPERFAMILY SSF55874 308 445 3.14E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS00900 6f86167b15028eb9fcf2a2a6d2eb650d 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 444 5.1E-8 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS00900 6f86167b15028eb9fcf2a2a6d2eb650d 450 Gene3D G3DSA:3.30.565.10 335 450 3.3E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS00900 6f86167b15028eb9fcf2a2a6d2eb650d 450 SMART SM00387 343 445 0.0026 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS17220 98fc305c292deb74707da1e2c2962adb 535 SMART SM00387 274 387 1.1E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS17220 98fc305c292deb74707da1e2c2962adb 535 Pfam PF00072 Response regulator receiver domain 414 525 5.1E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS17220 98fc305c292deb74707da1e2c2962adb 535 Gene3D G3DSA:3.40.50.2300 399 535 1.0E-43 T 29-03-2018 CHH28_RS17220 98fc305c292deb74707da1e2c2962adb 535 Gene3D G3DSA:3.30.565.10 231 396 3.1E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS17220 98fc305c292deb74707da1e2c2962adb 535 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 274 385 8.0E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS17220 98fc305c292deb74707da1e2c2962adb 535 Gene3D G3DSA:1.10.287.130 167 223 1.6E-20 T 29-03-2018 CHH28_RS17220 98fc305c292deb74707da1e2c2962adb 535 Gene3D G3DSA:3.30.450.20 75 166 2.2E-5 T 29-03-2018 CHH28_RS17220 98fc305c292deb74707da1e2c2962adb 535 SMART SM00448 412 525 3.7E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS17220 98fc305c292deb74707da1e2c2962adb 535 SUPERFAMILY SSF47384 145 228 2.55E-22 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS17220 98fc305c292deb74707da1e2c2962adb 535 SUPERFAMILY SSF55874 216 385 2.36E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS17220 98fc305c292deb74707da1e2c2962adb 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 327 3.7E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS17220 98fc305c292deb74707da1e2c2962adb 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 365 3.7E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS17220 98fc305c292deb74707da1e2c2962adb 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 341 3.7E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS17220 98fc305c292deb74707da1e2c2962adb 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 384 3.7E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS17220 98fc305c292deb74707da1e2c2962adb 535 SMART SM00388 162 227 3.2E-25 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS17220 98fc305c292deb74707da1e2c2962adb 535 Pfam PF00512 His Kinase A (phospho-acceptor) domain 162 227 1.3E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS17220 98fc305c292deb74707da1e2c2962adb 535 SUPERFAMILY SSF52172 408 530 3.84E-39 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS15765 a18075514d5405280f051c9ec3bb628e 372 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 159 257 2.0E-16 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CHH28_RS15765 a18075514d5405280f051c9ec3bb628e 372 SUPERFAMILY SSF161098 159 352 4.32E-34 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS15765 a18075514d5405280f051c9ec3bb628e 372 Gene3D G3DSA:1.10.3720.10 37 372 9.4E-36 T 29-03-2018 CHH28_RS15765 a18075514d5405280f051c9ec3bb628e 372 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 178 366 7.1E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS05720 9d7fa536a2947eb257b8c14989846fa6 248 Gene3D G3DSA:3.40.190.10 140 248 2.1E-7 T 29-03-2018 CHH28_RS05720 9d7fa536a2947eb257b8c14989846fa6 248 SUPERFAMILY SSF53850 24 246 5.97E-30 T 29-03-2018 CHH28_RS05720 9d7fa536a2947eb257b8c14989846fa6 248 Gene3D G3DSA:3.40.190.10 20 139 9.6E-9 T 29-03-2018 CHH28_RS05720 9d7fa536a2947eb257b8c14989846fa6 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 245 9.0E-16 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS15480 0d098ae972e46b9adedbd915926e16ce 352 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 343 8.6E-115 T 29-03-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 CHH28_RS15480 0d098ae972e46b9adedbd915926e16ce 352 Gene3D G3DSA:3.75.10.10 3 351 3.7E-123 T 29-03-2018 CHH28_RS15480 0d098ae972e46b9adedbd915926e16ce 352 SUPERFAMILY SSF55909 13 343 1.46E-115 T 29-03-2018 CHH28_RS16000 62fb84c9197951c3f9525e749606a5f6 261 SUPERFAMILY SSF53213 5 245 1.44E-72 T 29-03-2018 CHH28_RS16000 62fb84c9197951c3f9525e749606a5f6 261 Gene3D G3DSA:3.40.830.10 1 258 2.2E-70 T 29-03-2018 CHH28_RS16000 62fb84c9197951c3f9525e749606a5f6 261 PIRSF PIRSF006157 2 260 6.1E-78 T 29-03-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 CHH28_RS16000 62fb84c9197951c3f9525e749606a5f6 261 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 3 254 2.2E-40 T 29-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CHH28_RS00315 d65316340894443c2eff5a945572b0c9 447 Pfam PF08245 Mur ligase middle domain 112 281 3.6E-28 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CHH28_RS00315 d65316340894443c2eff5a945572b0c9 447 Gene3D G3DSA:3.40.50.720 1 96 1.3E-4 T 29-03-2018 CHH28_RS00315 d65316340894443c2eff5a945572b0c9 447 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 10 441 5.6E-122 T 29-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS00315 d65316340894443c2eff5a945572b0c9 447 Pfam PF02875 Mur ligase family, glutamate ligase domain 303 357 4.0E-6 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CHH28_RS00315 d65316340894443c2eff5a945572b0c9 447 SUPERFAMILY SSF53623 98 299 3.82E-48 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CHH28_RS00315 d65316340894443c2eff5a945572b0c9 447 SUPERFAMILY SSF53244 301 442 2.75E-44 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CHH28_RS00315 d65316340894443c2eff5a945572b0c9 447 Gene3D G3DSA:3.40.1190.10 97 301 1.0E-47 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CHH28_RS00315 d65316340894443c2eff5a945572b0c9 447 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 443 30.891 T 29-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS00315 d65316340894443c2eff5a945572b0c9 447 Gene3D G3DSA:3.90.190.20 306 442 3.9E-37 T 29-03-2018 CHH28_RS00315 d65316340894443c2eff5a945572b0c9 447 SUPERFAMILY SSF51984 10 93 1.69E-9 T 29-03-2018 CHH28_RS11105 f7cdba1d5acd5f057381098e22527c7b 534 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 512 2.0E-197 T 29-03-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 CHH28_RS11105 f7cdba1d5acd5f057381098e22527c7b 534 SUPERFAMILY SSF51905 348 440 6.26E-70 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS11105 f7cdba1d5acd5f057381098e22527c7b 534 SUPERFAMILY SSF51905 7 247 6.26E-70 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS11105 f7cdba1d5acd5f057381098e22527c7b 534 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 5.1E-8 T 29-03-2018 CHH28_RS11105 f7cdba1d5acd5f057381098e22527c7b 534 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.1E-8 T 29-03-2018 CHH28_RS11105 f7cdba1d5acd5f057381098e22527c7b 534 SUPERFAMILY SSF56425 230 345 2.09E-42 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS11105 f7cdba1d5acd5f057381098e22527c7b 534 Gene3D G3DSA:1.20.58.100 431 527 1.6E-26 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS11105 f7cdba1d5acd5f057381098e22527c7b 534 PIRSF PIRSF000171 331 534 5.3E-15 T 29-03-2018 CHH28_RS11105 f7cdba1d5acd5f057381098e22527c7b 534 PIRSF PIRSF000171 2 280 5.8E-19 T 29-03-2018 CHH28_RS11105 f7cdba1d5acd5f057381098e22527c7b 534 Pfam PF00890 FAD binding domain 8 384 2.4E-101 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS11105 f7cdba1d5acd5f057381098e22527c7b 534 Gene3D G3DSA:3.50.50.60 1 430 1.6E-70 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS11105 f7cdba1d5acd5f057381098e22527c7b 534 SUPERFAMILY SSF46977 417 517 7.19E-31 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS11105 f7cdba1d5acd5f057381098e22527c7b 534 Pfam PF02910 Fumarate reductase flavoprotein C-term 433 513 2.2E-13 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS05835 47a5b00ae197b266abb00fb40348c395 459 Gene3D G3DSA:2.70.70.10 263 425 1.7E-39 T 29-03-2018 CHH28_RS05835 47a5b00ae197b266abb00fb40348c395 459 Pfam PF01551 Peptidase family M23 320 413 1.5E-32 T 29-03-2018 IPR016047 Peptidase M23 CHH28_RS05835 47a5b00ae197b266abb00fb40348c395 459 Gene3D G3DSA:3.10.350.10 99 142 0.0079 T 29-03-2018 CHH28_RS05835 47a5b00ae197b266abb00fb40348c395 459 SUPERFAMILY SSF51261 172 415 5.75E-70 T 29-03-2018 IPR011055 Duplicated hybrid motif CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 PRINTS PR00996 Glutamate methyltransferase family signature 335 351 2.8E-25 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 PRINTS PR00996 Glutamate methyltransferase family signature 420 443 2.8E-25 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 PRINTS PR00996 Glutamate methyltransferase family signature 401 415 2.8E-25 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 PRINTS PR00996 Glutamate methyltransferase family signature 224 237 2.8E-25 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 PRINTS PR00996 Glutamate methyltransferase family signature 299 319 2.8E-25 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 PRINTS PR00996 Glutamate methyltransferase family signature 261 273 2.8E-25 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 SUPERFAMILY SSF47757 196 271 5.1E-12 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 Pfam PF13596 PAS domain 714 818 4.8E-18 T 29-03-2018 CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 Pfam PF01339 CheB methylesterase 11 183 4.4E-46 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 SMART SM00138 202 461 5.0E-86 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 Gene3D G3DSA:3.30.450.20 824 949 2.1E-7 T 29-03-2018 CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 Pfam PF03705 CheR methyltransferase, all-alpha domain 207 255 9.2E-10 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 SUPERFAMILY SSF52738 9 191 3.14E-46 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 Gene3D G3DSA:1.10.155.10 197 265 7.7E-12 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 SUPERFAMILY SSF55785 701 818 7.04E-8 T 29-03-2018 IPR000014 PAS domain CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 Gene3D G3DSA:1.20.5.400 637 702 3.8E-9 T 29-03-2018 CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 Pfam PF01739 CheR methyltransferase, SAM binding domain 269 454 4.3E-57 T 29-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 SUPERFAMILY SSF53335 268 451 9.22E-49 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 Gene3D G3DSA:3.40.50.180 3 196 5.0E-54 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 Gene3D G3DSA:3.30.450.20 703 823 2.7E-14 T 29-03-2018 CHH28_RS15705 ee9259bb2e619d3624c149237d4ecb94 959 Gene3D G3DSA:3.40.50.150 267 463 2.3E-42 T 29-03-2018 CHH28_RS15670 3692057ac55c00e09fdf9c8335e42dc0 279 SUPERFAMILY SSF141673 20 144 5.1E-32 T 29-03-2018 CHH28_RS15670 3692057ac55c00e09fdf9c8335e42dc0 279 SUPERFAMILY SSF50800 163 241 1.36E-12 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain CHH28_RS15670 3692057ac55c00e09fdf9c8335e42dc0 279 SUPERFAMILY SSF50800 17 66 1.36E-12 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain CHH28_RS15670 3692057ac55c00e09fdf9c8335e42dc0 279 Pfam PF03476 MOSC N-terminal beta barrel domain 17 129 5.1E-29 T 29-03-2018 IPR005303 MOSC, N-terminal beta barrel CHH28_RS15670 3692057ac55c00e09fdf9c8335e42dc0 279 Gene3D G3DSA:2.40.33.20 14 279 1.2E-42 T 29-03-2018 CHH28_RS15670 3692057ac55c00e09fdf9c8335e42dc0 279 Pfam PF03473 MOSC domain 152 275 1.1E-19 T 29-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CHH28_RS03885 e674b76ee78f9c69d11263c6fd08c7fe 68 Gene3D G3DSA:2.10.110.10 10 61 4.2E-4 T 29-03-2018 CHH28_RS04725 1d3fdc4aae9dabd6b69830aa944ed814 436 Pfam PF11808 Domain of unknown function (DUF3329) 5 87 2.2E-21 T 29-03-2018 IPR021766 Protein of unknown function DUF3329 GO:0004673 CHH28_RS04725 1d3fdc4aae9dabd6b69830aa944ed814 436 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 269 2.3E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS04725 1d3fdc4aae9dabd6b69830aa944ed814 436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 424 5.3E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04725 1d3fdc4aae9dabd6b69830aa944ed814 436 SUPERFAMILY SSF47384 190 269 1.29E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS04725 1d3fdc4aae9dabd6b69830aa944ed814 436 Pfam PF00989 PAS fold 98 154 4.1E-5 T 29-03-2018 IPR013767 PAS fold GO:0006355 CHH28_RS04725 1d3fdc4aae9dabd6b69830aa944ed814 436 SUPERFAMILY SSF55785 85 156 2.79E-6 T 29-03-2018 IPR000014 PAS domain CHH28_RS04725 1d3fdc4aae9dabd6b69830aa944ed814 436 Gene3D G3DSA:1.10.287.130 209 266 6.0E-20 T 29-03-2018 CHH28_RS04725 1d3fdc4aae9dabd6b69830aa944ed814 436 Gene3D G3DSA:3.30.450.20 94 208 4.7E-11 T 29-03-2018 CHH28_RS04725 1d3fdc4aae9dabd6b69830aa944ed814 436 SMART SM00387 314 426 6.4E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04725 1d3fdc4aae9dabd6b69830aa944ed814 436 Gene3D G3DSA:3.30.565.10 273 434 4.8E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04725 1d3fdc4aae9dabd6b69830aa944ed814 436 SMART SM00091 96 162 0.0015 T 29-03-2018 IPR000014 PAS domain CHH28_RS04725 1d3fdc4aae9dabd6b69830aa944ed814 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 8.5E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS04725 1d3fdc4aae9dabd6b69830aa944ed814 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 8.5E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS04725 1d3fdc4aae9dabd6b69830aa944ed814 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 365 8.5E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS04725 1d3fdc4aae9dabd6b69830aa944ed814 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 379 8.5E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS04725 1d3fdc4aae9dabd6b69830aa944ed814 436 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 92 422 1.1E-129 T 29-03-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 CHH28_RS04725 1d3fdc4aae9dabd6b69830aa944ed814 436 SMART SM00388 203 270 6.7E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS04725 1d3fdc4aae9dabd6b69830aa944ed814 436 SUPERFAMILY SSF55874 260 425 1.05E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS10265 cc0ebb53fed940b2a4ebebb17d01706b 267 Pfam PF01435 Peptidase family M48 80 249 5.6E-23 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CHH28_RS10265 cc0ebb53fed940b2a4ebebb17d01706b 267 Gene3D G3DSA:3.30.2010.10 71 160 1.1E-16 T 29-03-2018 CHH28_RS10815 45db1032681f3d58ee6941981ec770b3 170 SUPERFAMILY SSF54427 30 164 2.85E-20 T 29-03-2018 IPR032710 NTF2-like domain CHH28_RS10815 45db1032681f3d58ee6941981ec770b3 170 Gene3D G3DSA:3.10.450.50 15 167 1.4E-21 T 29-03-2018 CHH28_RS10815 45db1032681f3d58ee6941981ec770b3 170 Pfam PF12680 SnoaL-like domain 41 152 3.2E-15 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CHH28_RS13620 db9ea13ae8fe6448a3446a05d752abef 358 Gene3D G3DSA:3.40.50.2000 179 333 5.8E-40 T 29-03-2018 CHH28_RS13620 db9ea13ae8fe6448a3446a05d752abef 358 Pfam PF13439 Glycosyltransferase Family 4 13 170 1.8E-14 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CHH28_RS13620 db9ea13ae8fe6448a3446a05d752abef 358 SUPERFAMILY SSF53756 5 342 1.08E-64 T 29-03-2018 CHH28_RS13620 db9ea13ae8fe6448a3446a05d752abef 358 Pfam PF00534 Glycosyl transferases group 1 180 327 3.3E-36 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CHH28_RS13620 db9ea13ae8fe6448a3446a05d752abef 358 Gene3D G3DSA:3.40.50.2000 6 178 8.7E-15 T 29-03-2018 CHH28_RS10920 f5c5a4e9973726373d02aad2e978b951 449 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 258 269 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CHH28_RS10920 f5c5a4e9973726373d02aad2e978b951 449 Gene3D G3DSA:3.30.70.20 266 287 0.0026 T 29-03-2018 CHH28_RS10920 f5c5a4e9973726373d02aad2e978b951 449 SUPERFAMILY SSF54862 95 117 1.05E-26 T 29-03-2018 CHH28_RS10920 f5c5a4e9973726373d02aad2e978b951 449 SUPERFAMILY SSF54862 163 316 1.05E-26 T 29-03-2018 CHH28_RS10920 f5c5a4e9973726373d02aad2e978b951 449 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 344 414 3.5E-7 T 29-03-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain CHH28_RS10920 f5c5a4e9973726373d02aad2e978b951 449 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 31 432 5.2E-126 T 29-03-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 CHH28_RS10920 f5c5a4e9973726373d02aad2e978b951 449 Gene3D G3DSA:3.30.70.20 212 265 6.5E-11 T 29-03-2018 CHH28_RS10920 f5c5a4e9973726373d02aad2e978b951 449 Gene3D G3DSA:3.30.70.20 288 316 0.0023 T 29-03-2018 CHH28_RS10920 f5c5a4e9973726373d02aad2e978b951 449 Gene3D G3DSA:2.60.40.10 340 440 1.9E-6 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS10920 f5c5a4e9973726373d02aad2e978b951 449 Pfam PF13746 4Fe-4S dicluster domain 209 309 2.5E-36 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CHH28_RS10920 f5c5a4e9973726373d02aad2e978b951 449 Pfam PF12801 4Fe-4S binding domain 86 124 1.8E-7 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CHH28_RS10530 3fdb75984070b72ad09b7cd931f14fa1 225 SUPERFAMILY SSF52540 2 212 3.09E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS10530 3fdb75984070b72ad09b7cd931f14fa1 225 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 30 43 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CHH28_RS10530 3fdb75984070b72ad09b7cd931f14fa1 225 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS10530 3fdb75984070b72ad09b7cd931f14fa1 225 Gene3D G3DSA:3.40.50.300 1 219 2.1E-50 T 29-03-2018 CHH28_RS10530 3fdb75984070b72ad09b7cd931f14fa1 225 SMART SM00382 26 220 9.8E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS10530 3fdb75984070b72ad09b7cd931f14fa1 225 Pfam PF00005 ABC transporter 22 172 4.5E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS00500 ac417e63cb029046d630a1eae0ca0e60 100 SMART SM01103 3 86 1.3E-34 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CHH28_RS00500 ac417e63cb029046d630a1eae0ca0e60 100 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 2.3E-15 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CHH28_RS00500 ac417e63cb029046d630a1eae0ca0e60 100 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 11 92 6.0E-21 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CHH28_RS00500 ac417e63cb029046d630a1eae0ca0e60 100 Gene3D G3DSA:3.30.110.60 2 97 4.5E-19 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CHH28_RS00500 ac417e63cb029046d630a1eae0ca0e60 100 SUPERFAMILY SSF75471 1 96 3.01E-25 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CHH28_RS12970 1c60065a8959c8b46edda83b7bc00b18 165 Pfam PF00583 Acetyltransferase (GNAT) family 45 142 2.3E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS12970 1c60065a8959c8b46edda83b7bc00b18 165 SUPERFAMILY SSF55729 6 149 1.66E-19 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS12970 1c60065a8959c8b46edda83b7bc00b18 165 Gene3D G3DSA:3.40.630.30 2 165 3.5E-21 T 29-03-2018 CHH28_RS13765 f065edd5a1b637686475b6881649dd31 185 Pfam PF04315 Elongation factor P hydroxylase 14 174 2.3E-73 T 29-03-2018 IPR007411 Elongation factor P hydroxylase CHH28_RS03000 ad6bd8b8f4ce4120dfd86934c0dfc78f 407 Pfam PF02441 Flavoprotein 7 183 3.7E-44 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CHH28_RS03000 ad6bd8b8f4ce4120dfd86934c0dfc78f 407 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 189 370 6.5E-75 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CHH28_RS03000 ad6bd8b8f4ce4120dfd86934c0dfc78f 407 Gene3D G3DSA:3.40.50.1950 1 186 5.9E-58 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CHH28_RS03000 ad6bd8b8f4ce4120dfd86934c0dfc78f 407 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 394 2.7E-148 T 29-03-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 CHH28_RS03000 ad6bd8b8f4ce4120dfd86934c0dfc78f 407 SUPERFAMILY SSF52507 1 183 7.85E-61 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CHH28_RS03000 ad6bd8b8f4ce4120dfd86934c0dfc78f 407 SUPERFAMILY SSF102645 188 400 1.2E-79 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CHH28_RS03000 ad6bd8b8f4ce4120dfd86934c0dfc78f 407 Gene3D G3DSA:3.40.50.10300 187 404 5.2E-74 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CHH28_RS02010 6aab4dd0ea8970399c0c20621ac14a85 641 SUPERFAMILY SSF56300 403 527 6.45E-9 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS02010 6aab4dd0ea8970399c0c20621ac14a85 641 SUPERFAMILY SSF56300 140 194 6.45E-9 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS02010 6aab4dd0ea8970399c0c20621ac14a85 641 SUPERFAMILY SSF56300 314 356 6.45E-9 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS02010 6aab4dd0ea8970399c0c20621ac14a85 641 Gene3D G3DSA:3.60.21.10 123 631 1.5E-32 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS06135 2adcfa89c86552a7da8fff6f60cbdca2 206 SMART SM01390 3 95 1.1E-47 T 29-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CHH28_RS06135 2adcfa89c86552a7da8fff6f60cbdca2 206 Gene3D G3DSA:1.10.1050.10 144 206 8.7E-17 T 29-03-2018 CHH28_RS06135 2adcfa89c86552a7da8fff6f60cbdca2 206 Gene3D G3DSA:1.10.1050.10 1 101 6.9E-41 T 29-03-2018 CHH28_RS06135 2adcfa89c86552a7da8fff6f60cbdca2 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 7.9E-81 T 29-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CHH28_RS06135 2adcfa89c86552a7da8fff6f60cbdca2 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 4.0E-31 T 29-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CHH28_RS06135 2adcfa89c86552a7da8fff6f60cbdca2 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 35.386 T 29-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CHH28_RS06135 2adcfa89c86552a7da8fff6f60cbdca2 206 Gene3D G3DSA:3.10.290.10 102 143 1.7E-16 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CHH28_RS06135 2adcfa89c86552a7da8fff6f60cbdca2 206 Pfam PF01479 S4 domain 97 143 4.0E-20 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CHH28_RS06135 2adcfa89c86552a7da8fff6f60cbdca2 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 29-03-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06135 2adcfa89c86552a7da8fff6f60cbdca2 206 SMART SM00363 96 160 5.6E-20 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CHH28_RS06135 2adcfa89c86552a7da8fff6f60cbdca2 206 SUPERFAMILY SSF55174 3 206 5.89E-69 T 29-03-2018 CHH28_RS11185 5b87ec8c010a4bb2067f9bf9fe9c4f25 752 Pfam PF13328 HD domain 42 201 2.9E-41 T 29-03-2018 IPR003607 HD/PDEase domain CHH28_RS11185 5b87ec8c010a4bb2067f9bf9fe9c4f25 752 SUPERFAMILY SSF109604 18 217 2.32E-45 T 29-03-2018 CHH28_RS11185 5b87ec8c010a4bb2067f9bf9fe9c4f25 752 Gene3D G3DSA:3.30.70.260 669 750 3.6E-14 T 29-03-2018 CHH28_RS11185 5b87ec8c010a4bb2067f9bf9fe9c4f25 752 Pfam PF04607 Region found in RelA / SpoT proteins 261 370 9.2E-37 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 CHH28_RS11185 5b87ec8c010a4bb2067f9bf9fe9c4f25 752 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 67 746 9.0E-192 T 29-03-2018 IPR004811 RelA/SpoT family GO:0015969 CHH28_RS11185 5b87ec8c010a4bb2067f9bf9fe9c4f25 752 SUPERFAMILY SSF81301 206 419 2.45E-63 T 29-03-2018 CHH28_RS11185 5b87ec8c010a4bb2067f9bf9fe9c4f25 752 Gene3D G3DSA:3.10.20.30 409 483 2.2E-22 T 29-03-2018 IPR012675 Beta-grasp domain CHH28_RS11185 5b87ec8c010a4bb2067f9bf9fe9c4f25 752 Pfam PF13291 ACT domain 670 747 1.8E-21 T 29-03-2018 IPR002912 ACT domain CHH28_RS11185 5b87ec8c010a4bb2067f9bf9fe9c4f25 752 Gene3D G3DSA:3.30.460.10 218 351 1.1E-43 T 29-03-2018 CHH28_RS11185 5b87ec8c010a4bb2067f9bf9fe9c4f25 752 SUPERFAMILY SSF81271 408 474 5.67E-20 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CHH28_RS11185 5b87ec8c010a4bb2067f9bf9fe9c4f25 752 SMART SM00954 261 371 1.5E-65 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 CHH28_RS11185 5b87ec8c010a4bb2067f9bf9fe9c4f25 752 Pfam PF02824 TGS domain 415 474 8.6E-21 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CHH28_RS11185 5b87ec8c010a4bb2067f9bf9fe9c4f25 752 SUPERFAMILY SSF55021 670 748 7.08E-17 T 29-03-2018 CHH28_RS12470 27e82b71439b3aa83e88ba000c8a6bf2 230 Pfam PF02146 Sir2 family 11 181 1.3E-50 T 29-03-2018 IPR003000 Sirtuin family GO:0070403 CHH28_RS12470 27e82b71439b3aa83e88ba000c8a6bf2 230 SUPERFAMILY SSF52467 4 228 3.27E-74 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CHH28_RS12470 27e82b71439b3aa83e88ba000c8a6bf2 230 Gene3D G3DSA:3.40.50.1220 3 229 4.2E-56 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CHH28_RS12470 27e82b71439b3aa83e88ba000c8a6bf2 230 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 4 227 56.344 T 29-03-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 CHH28_RS00885 3bb60e53766136bc4897319ca80e33d2 259 PIRSF PIRSF004846 4 256 4.4E-49 T 29-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CHH28_RS00885 3bb60e53766136bc4897319ca80e33d2 259 Pfam PF13531 Bacterial extracellular solute-binding protein 22 254 4.9E-48 T 29-03-2018 CHH28_RS00885 3bb60e53766136bc4897319ca80e33d2 259 Gene3D G3DSA:3.40.190.10 16 108 5.9E-16 T 29-03-2018 CHH28_RS00885 3bb60e53766136bc4897319ca80e33d2 259 Gene3D G3DSA:3.40.190.10 109 211 4.5E-24 T 29-03-2018 CHH28_RS00885 3bb60e53766136bc4897319ca80e33d2 259 SUPERFAMILY SSF53850 20 254 7.5E-53 T 29-03-2018 CHH28_RS00885 3bb60e53766136bc4897319ca80e33d2 259 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 27 252 1.2E-53 T 29-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CHH28_RS00735 01441e1634a99fec988f4b5f902c3144 233 Gene3D G3DSA:1.20.5.620 24 93 5.5E-5 T 29-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain CHH28_RS00735 01441e1634a99fec988f4b5f902c3144 233 Pfam PF01991 ATP synthase (E/31 kDa) subunit 28 143 1.2E-5 T 29-03-2018 IPR002842 ATPase, V1/A1 complex, subunit E GO:0015991|GO:0033178|GO:0046961 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CHH28_RS08090 d47e004fdda056080516935c64cf8a25 450 Gene3D G3DSA:2.40.160.60 23 449 5.7E-58 T 29-03-2018 CHH28_RS08090 d47e004fdda056080516935c64cf8a25 450 SUPERFAMILY SSF56935 24 449 1.59E-64 T 29-03-2018 CHH28_RS08090 d47e004fdda056080516935c64cf8a25 450 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 447 6.0E-81 T 29-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CHH28_RS07750 f494b8b46729882738feb005beca53e6 395 SUPERFAMILY SSF53901 273 394 3.33E-38 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS07750 f494b8b46729882738feb005beca53e6 395 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 393 3.5E-126 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CHH28_RS07750 f494b8b46729882738feb005beca53e6 395 ProSitePatterns PS00099 Thiolases active site. 376 389 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CHH28_RS07750 f494b8b46729882738feb005beca53e6 395 PIRSF PIRSF000429 1 395 6.6E-114 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CHH28_RS07750 f494b8b46729882738feb005beca53e6 395 Pfam PF00108 Thiolase, N-terminal domain 7 265 1.8E-85 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CHH28_RS07750 f494b8b46729882738feb005beca53e6 395 Gene3D G3DSA:3.40.47.10 269 392 1.3E-28 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS07750 f494b8b46729882738feb005beca53e6 395 Pfam PF02803 Thiolase, C-terminal domain 273 393 6.0E-42 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CHH28_RS07750 f494b8b46729882738feb005beca53e6 395 Gene3D G3DSA:3.40.47.10 4 268 1.1E-57 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS07750 f494b8b46729882738feb005beca53e6 395 SUPERFAMILY SSF53901 7 272 8.02E-79 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS07670 91f2526f13ec53c7100afc5b66bb95f5 324 Pfam PF12833 Helix-turn-helix domain 242 319 7.4E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS07670 91f2526f13ec53c7100afc5b66bb95f5 324 Gene3D G3DSA:1.10.10.60 271 324 1.3E-13 T 29-03-2018 CHH28_RS07670 91f2526f13ec53c7100afc5b66bb95f5 324 SMART SM00342 235 318 6.1E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS07670 91f2526f13ec53c7100afc5b66bb95f5 324 Pfam PF01965 DJ-1/PfpI family 20 180 1.5E-15 T 29-03-2018 IPR002818 DJ-1/PfpI CHH28_RS07670 91f2526f13ec53c7100afc5b66bb95f5 324 Gene3D G3DSA:3.40.50.880 1 226 4.1E-47 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS07670 91f2526f13ec53c7100afc5b66bb95f5 324 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 272 314 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CHH28_RS07670 91f2526f13ec53c7100afc5b66bb95f5 324 SUPERFAMILY SSF46689 271 321 2.6E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS07670 91f2526f13ec53c7100afc5b66bb95f5 324 SUPERFAMILY SSF52317 1 198 9.16E-42 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS07670 91f2526f13ec53c7100afc5b66bb95f5 324 Gene3D G3DSA:1.10.10.60 227 270 2.6E-13 T 29-03-2018 CHH28_RS07670 91f2526f13ec53c7100afc5b66bb95f5 324 SUPERFAMILY SSF46689 218 269 2.02E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS01055 cd1e79b28bc3f55824ba34cd222f7f87 343 Pfam PF03561 Allantoicase repeat 22 174 2.1E-42 T 29-03-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 CHH28_RS01055 cd1e79b28bc3f55824ba34cd222f7f87 343 Pfam PF03561 Allantoicase repeat 197 335 5.2E-42 T 29-03-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 CHH28_RS01055 cd1e79b28bc3f55824ba34cd222f7f87 343 TIGRFAM TIGR02961 allantoicase: allantoicase 12 335 9.6E-115 T 29-03-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 CHH28_RS01055 cd1e79b28bc3f55824ba34cd222f7f87 343 Gene3D G3DSA:2.60.120.260 178 340 5.0E-50 T 29-03-2018 IPR008979 Galactose-binding domain-like CHH28_RS01055 cd1e79b28bc3f55824ba34cd222f7f87 343 Gene3D G3DSA:2.60.120.260 1 177 4.7E-58 T 29-03-2018 IPR008979 Galactose-binding domain-like CHH28_RS01055 cd1e79b28bc3f55824ba34cd222f7f87 343 SUPERFAMILY SSF49785 8 175 4.0E-50 T 29-03-2018 IPR008979 Galactose-binding domain-like CHH28_RS01055 cd1e79b28bc3f55824ba34cd222f7f87 343 SUPERFAMILY SSF49785 187 337 4.68E-44 T 29-03-2018 IPR008979 Galactose-binding domain-like CHH28_RS01055 cd1e79b28bc3f55824ba34cd222f7f87 343 PIRSF PIRSF016516 1 339 4.9E-115 T 29-03-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 CHH28_RS01055 cd1e79b28bc3f55824ba34cd222f7f87 343 Hamap MF_00813 Probable allantoicase [alc]. 1 338 41.136 T 29-03-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 CHH28_RS03490 53cd193a4b23e29a94335748a7cfe71f 776 SUPERFAMILY SSF50249 640 731 7.16E-25 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS03490 53cd193a4b23e29a94335748a7cfe71f 776 Pfam PF16921 Tex protein YqgF-like domain 326 453 5.3E-52 T 29-03-2018 IPR032639 Tex protein, YqgF-like domain CHH28_RS03490 53cd193a4b23e29a94335748a7cfe71f 776 SUPERFAMILY SSF158832 5 321 9.15E-118 T 29-03-2018 CHH28_RS03490 53cd193a4b23e29a94335748a7cfe71f 776 Gene3D G3DSA:1.10.3500.10 111 326 5.8E-60 T 29-03-2018 IPR023323 Tex-like domain CHH28_RS03490 53cd193a4b23e29a94335748a7cfe71f 776 SUPERFAMILY SSF47781 472 559 3.78E-28 T 29-03-2018 IPR010994 RuvA domain 2-like CHH28_RS03490 53cd193a4b23e29a94335748a7cfe71f 776 SMART SM00316 651 722 1.2E-23 T 29-03-2018 IPR022967 RNA-binding domain, S1 CHH28_RS03490 53cd193a4b23e29a94335748a7cfe71f 776 Pfam PF12836 Helix-hairpin-helix motif 493 557 9.1E-29 T 29-03-2018 CHH28_RS03490 53cd193a4b23e29a94335748a7cfe71f 776 Pfam PF09371 Tex-like protein N-terminal domain 10 193 4.4E-68 T 29-03-2018 IPR018974 Tex-like protein, N-terminal CHH28_RS03490 53cd193a4b23e29a94335748a7cfe71f 776 Gene3D G3DSA:2.40.50.140 653 754 1.2E-26 T 29-03-2018 CHH28_RS03490 53cd193a4b23e29a94335748a7cfe71f 776 Pfam PF00575 S1 RNA binding domain 651 722 3.7E-19 T 29-03-2018 IPR003029 S1 domain GO:0003676 CHH28_RS03490 53cd193a4b23e29a94335748a7cfe71f 776 Gene3D G3DSA:3.30.420.140 327 472 4.8E-53 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CHH28_RS03490 53cd193a4b23e29a94335748a7cfe71f 776 Gene3D G3DSA:1.10.10.650 3 110 4.1E-34 T 29-03-2018 IPR023319 Tex-like protein, HTH domain CHH28_RS03490 53cd193a4b23e29a94335748a7cfe71f 776 SMART SM00732 326 426 1.9E-33 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CHH28_RS03490 53cd193a4b23e29a94335748a7cfe71f 776 SUPERFAMILY SSF53098 322 471 6.22E-50 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS03490 53cd193a4b23e29a94335748a7cfe71f 776 SUPERFAMILY SSF47781 562 634 3.56E-19 T 29-03-2018 IPR010994 RuvA domain 2-like CHH28_RS03490 53cd193a4b23e29a94335748a7cfe71f 776 Gene3D G3DSA:1.10.150.310 501 632 3.0E-43 T 29-03-2018 CHH28_RS09815 6509c0cd072476a08eea84c44c84bebd 253 Gene3D G3DSA:3.40.50.1980 89 247 8.5E-37 T 29-03-2018 CHH28_RS09815 6509c0cd072476a08eea84c44c84bebd 253 Pfam PF01497 Periplasmic binding protein 5 221 4.1E-27 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CHH28_RS09815 6509c0cd072476a08eea84c44c84bebd 253 SUPERFAMILY SSF53807 2 242 9.03E-61 T 29-03-2018 CHH28_RS09815 6509c0cd072476a08eea84c44c84bebd 253 Gene3D G3DSA:3.40.50.1980 1 88 7.4E-20 T 29-03-2018 CHH28_RS11300 9979dd0e390b16d7d69904a828fb598c 426 Gene3D G3DSA:3.40.50.800 327 426 7.2E-16 T 29-03-2018 IPR004154 Anticodon-binding CHH28_RS11300 9979dd0e390b16d7d69904a828fb598c 426 SUPERFAMILY SSF55681 4 320 2.79E-105 T 29-03-2018 CHH28_RS11300 9979dd0e390b16d7d69904a828fb598c 426 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 410 1.4E-155 T 29-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CHH28_RS11300 9979dd0e390b16d7d69904a828fb598c 426 PIRSF PIRSF001549 1 424 2.4E-120 T 29-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CHH28_RS11300 9979dd0e390b16d7d69904a828fb598c 426 Gene3D G3DSA:3.30.930.10 1 326 3.2E-73 T 29-03-2018 CHH28_RS11300 9979dd0e390b16d7d69904a828fb598c 426 Pfam PF13393 Histidyl-tRNA synthetase 10 312 3.4E-46 T 29-03-2018 CHH28_RS11300 9979dd0e390b16d7d69904a828fb598c 426 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 423 33.356 T 29-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CHH28_RS11300 9979dd0e390b16d7d69904a828fb598c 426 SUPERFAMILY SSF52954 329 425 2.62E-20 T 29-03-2018 IPR004154 Anticodon-binding CHH28_RS11300 9979dd0e390b16d7d69904a828fb598c 426 Pfam PF03129 Anticodon binding domain 332 422 2.4E-8 T 29-03-2018 IPR004154 Anticodon-binding CHH28_RS03910 e75e9f852612c51b21fc4cfcd70db47d 303 Pfam PF00850 Histone deacetylase domain 38 281 9.1E-48 T 29-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CHH28_RS03910 e75e9f852612c51b21fc4cfcd70db47d 303 Gene3D G3DSA:3.40.800.20 1 299 3.7E-60 T 29-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CHH28_RS03910 e75e9f852612c51b21fc4cfcd70db47d 303 SUPERFAMILY SSF52768 1 283 3.17E-79 T 29-03-2018 CHH28_RS03910 e75e9f852612c51b21fc4cfcd70db47d 303 PRINTS PR01270 Histone deacetylase superfamily signature 116 139 1.0E-14 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CHH28_RS03910 e75e9f852612c51b21fc4cfcd70db47d 303 PRINTS PR01270 Histone deacetylase superfamily signature 150 165 1.0E-14 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CHH28_RS03910 e75e9f852612c51b21fc4cfcd70db47d 303 PRINTS PR01270 Histone deacetylase superfamily signature 224 234 1.0E-14 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CHH28_RS01955 943247f422de0ec65626ff1063f28605 405 Pfam PF00005 ABC transporter 37 169 7.8E-17 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS01955 943247f422de0ec65626ff1063f28605 405 Pfam PF14524 Wzt C-terminal domain 253 388 3.4E-31 T 29-03-2018 IPR029439 Wzt, C-terminal CHH28_RS01955 943247f422de0ec65626ff1063f28605 405 SMART SM00382 46 225 1.5E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS01955 943247f422de0ec65626ff1063f28605 405 Gene3D G3DSA:3.40.50.300 24 255 1.5E-46 T 29-03-2018 CHH28_RS01955 943247f422de0ec65626ff1063f28605 405 Gene3D G3DSA:2.70.50.60 256 387 2.5E-32 T 29-03-2018 CHH28_RS01955 943247f422de0ec65626ff1063f28605 405 SUPERFAMILY SSF52540 32 235 8.53E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS01955 943247f422de0ec65626ff1063f28605 405 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS19260 9a3831a7db3b7ad3066ba7dc2fbf4292 514 SUPERFAMILY SSF64158 79 309 6.28E-80 T 29-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS19260 9a3831a7db3b7ad3066ba7dc2fbf4292 514 Gene3D G3DSA:3.40.1450.10 79 299 4.2E-91 T 29-03-2018 CHH28_RS19260 9a3831a7db3b7ad3066ba7dc2fbf4292 514 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 84 298 6.3E-80 T 29-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS19260 9a3831a7db3b7ad3066ba7dc2fbf4292 514 Pfam PF01676 Metalloenzyme superfamily 8 499 4.6E-74 T 29-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CHH28_RS19260 9a3831a7db3b7ad3066ba7dc2fbf4292 514 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 511 48.959 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS19260 9a3831a7db3b7ad3066ba7dc2fbf4292 514 PIRSF PIRSF001492 1 513 4.8E-201 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS19260 9a3831a7db3b7ad3066ba7dc2fbf4292 514 Gene3D G3DSA:3.40.720.10 300 512 3.2E-40 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CHH28_RS19260 9a3831a7db3b7ad3066ba7dc2fbf4292 514 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 7 510 8.3E-219 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS19260 9a3831a7db3b7ad3066ba7dc2fbf4292 514 SUPERFAMILY SSF53649 8 79 1.15E-67 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CHH28_RS19260 9a3831a7db3b7ad3066ba7dc2fbf4292 514 SUPERFAMILY SSF53649 310 510 1.15E-67 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CHH28_RS11165 7242b3cf61ab77363ea40d9dbca546f3 133 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 12 107 1.2E-18 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CHH28_RS11165 7242b3cf61ab77363ea40d9dbca546f3 133 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 9 133 2.3E-30 T 29-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CHH28_RS11165 7242b3cf61ab77363ea40d9dbca546f3 133 SUPERFAMILY SSF56214 10 131 1.15E-25 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CHH28_RS11165 7242b3cf61ab77363ea40d9dbca546f3 133 Gene3D G3DSA:3.90.470.20 6 133 3.4E-33 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CHH28_RS11165 7242b3cf61ab77363ea40d9dbca546f3 133 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 10 132 2.0E-23 T 29-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CHH28_RS11165 7242b3cf61ab77363ea40d9dbca546f3 133 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 11 133 22.035 T 29-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CHH28_RS11165 7242b3cf61ab77363ea40d9dbca546f3 133 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 16 133 4.0E-20 T 29-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CHH28_RS00190 c948e170d5d69784869f65b3001048d0 210 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 179 8.8E-44 T 29-03-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CHH28_RS00190 c948e170d5d69784869f65b3001048d0 210 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 4 101 2.0E-19 T 29-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CHH28_RS00190 c948e170d5d69784869f65b3001048d0 210 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 4 101 22.969 T 29-03-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CHH28_RS00190 c948e170d5d69784869f65b3001048d0 210 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 106 197 4.9E-27 T 29-03-2018 IPR020057 Ribosomal protein L25, beta domain CHH28_RS00190 c948e170d5d69784869f65b3001048d0 210 SUPERFAMILY SSF50715 4 203 5.58E-54 T 29-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CHH28_RS00190 c948e170d5d69784869f65b3001048d0 210 Gene3D G3DSA:2.40.240.10 3 101 5.6E-31 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CHH28_RS00190 c948e170d5d69784869f65b3001048d0 210 Gene3D G3DSA:2.170.120.20 105 201 9.9E-28 T 29-03-2018 IPR020057 Ribosomal protein L25, beta domain CHH28_RS00190 c948e170d5d69784869f65b3001048d0 210 Pfam PF01386 Ribosomal L25p family 6 98 5.5E-27 T 29-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CHH28_RS00190 c948e170d5d69784869f65b3001048d0 210 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 195 30.039 T 29-03-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CHH28_RS11705 b9ef389dc935c44251073b3e80b9ef40 312 Pfam PF01758 Sodium Bile acid symporter family 35 212 7.2E-43 T 29-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CHH28_RS12600 096253f5531270a03d25a08622bd3c3b 259 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 2 257 16.496 T 29-03-2018 IPR034706 Cell division coordinator CpoB GO:0051301 CHH28_RS12600 096253f5531270a03d25a08622bd3c3b 259 Pfam PF13174 Tetratricopeptide repeat 212 241 0.015 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS12600 096253f5531270a03d25a08622bd3c3b 259 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 138 249 6.8E-28 T 29-03-2018 IPR014162 Cell division coordinator CpoB, C-terminal CHH28_RS12600 096253f5531270a03d25a08622bd3c3b 259 Gene3D G3DSA:1.25.40.10 113 258 6.0E-20 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS12600 096253f5531270a03d25a08622bd3c3b 259 Gene3D G3DSA:1.20.5.170 41 112 0.0021 T 29-03-2018 CHH28_RS12600 096253f5531270a03d25a08622bd3c3b 259 SUPERFAMILY SSF48452 137 256 4.24E-17 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS12600 096253f5531270a03d25a08622bd3c3b 259 Pfam PF13432 Tetratricopeptide repeat 141 206 5.4E-12 T 29-03-2018 CHH28_RS12600 096253f5531270a03d25a08622bd3c3b 259 Pfam PF16331 TolA binding protein trimerisation 50 111 4.8E-12 T 29-03-2018 IPR032519 YbgF, trimerisation domain GO:0070206 CHH28_RS00775 a53fa3c0b596163016cb436bdb5265d0 257 Gene3D G3DSA:4.10.1070.10 105 243 2.8E-7 T 29-03-2018 CHH28_RS00775 a53fa3c0b596163016cb436bdb5265d0 257 SUPERFAMILY SSF88874 51 251 5.75E-35 T 29-03-2018 CHH28_RS00775 a53fa3c0b596163016cb436bdb5265d0 257 Gene3D G3DSA:3.90.1340.10 42 104 7.5E-20 T 29-03-2018 IPR011083 Phage tail collar domain CHH28_RS00775 a53fa3c0b596163016cb436bdb5265d0 257 Pfam PF07484 Phage Tail Collar Domain 56 110 3.5E-22 T 29-03-2018 IPR011083 Phage tail collar domain CHH28_RS01995 cae58f18bfe18611fa06db3790fe6b6e 466 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 45 465 1.2E-116 T 29-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 CHH28_RS01995 cae58f18bfe18611fa06db3790fe6b6e 466 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 361 385 7.1E-48 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CHH28_RS01995 cae58f18bfe18611fa06db3790fe6b6e 466 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 445 465 7.1E-48 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CHH28_RS01995 cae58f18bfe18611fa06db3790fe6b6e 466 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 53 76 7.1E-48 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CHH28_RS01995 cae58f18bfe18611fa06db3790fe6b6e 466 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 328 349 7.1E-48 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CHH28_RS01995 cae58f18bfe18611fa06db3790fe6b6e 466 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 95 115 7.1E-48 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CHH28_RS01995 cae58f18bfe18611fa06db3790fe6b6e 466 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 385 408 7.1E-48 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CHH28_RS01995 cae58f18bfe18611fa06db3790fe6b6e 466 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 430 445 7.1E-48 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CHH28_RS01995 cae58f18bfe18611fa06db3790fe6b6e 466 Pfam PF13533 Biotin-lipoyl like 93 131 3.3E-6 T 29-03-2018 CHH28_RS01995 cae58f18bfe18611fa06db3790fe6b6e 466 Gene3D G3DSA:1.20.5.50 132 240 3.9E-6 T 29-03-2018 CHH28_RS01995 cae58f18bfe18611fa06db3790fe6b6e 466 Pfam PF13437 HlyD family secretion protein 316 417 4.0E-13 T 29-03-2018 CHH28_RS01995 cae58f18bfe18611fa06db3790fe6b6e 466 Gene3D G3DSA:3.90.1170.30 19 131 1.0E-6 T 29-03-2018 CHH28_RS01995 cae58f18bfe18611fa06db3790fe6b6e 466 Gene3D G3DSA:2.40.50.100 307 444 2.4E-4 T 29-03-2018 CHH28_RS03015 9ba605b09eb8787eb9c0125adfc8008f 299 Hamap MF_00082_B Acetylglutamate kinase [argB]. 26 297 36.812 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CHH28_RS03015 9ba605b09eb8787eb9c0125adfc8008f 299 TIGRFAM TIGR00761 argB: acetylglutamate kinase 29 272 9.3E-78 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CHH28_RS03015 9ba605b09eb8787eb9c0125adfc8008f 299 PRINTS PR00474 Glutamate 5-kinase family signature 59 73 7.5E-10 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CHH28_RS03015 9ba605b09eb8787eb9c0125adfc8008f 299 PRINTS PR00474 Glutamate 5-kinase family signature 197 224 7.5E-10 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CHH28_RS03015 9ba605b09eb8787eb9c0125adfc8008f 299 PRINTS PR00474 Glutamate 5-kinase family signature 247 267 7.5E-10 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CHH28_RS03015 9ba605b09eb8787eb9c0125adfc8008f 299 Gene3D G3DSA:3.40.1160.10 3 299 2.3E-72 T 29-03-2018 CHH28_RS03015 9ba605b09eb8787eb9c0125adfc8008f 299 Pfam PF00696 Amino acid kinase family 28 274 4.1E-42 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CHH28_RS03015 9ba605b09eb8787eb9c0125adfc8008f 299 SUPERFAMILY SSF53633 9 297 7.46E-94 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CHH28_RS03015 9ba605b09eb8787eb9c0125adfc8008f 299 Hamap MF_00082_A Acetylglutamate kinase [argB]. 29 282 28.848 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CHH28_RS03015 9ba605b09eb8787eb9c0125adfc8008f 299 PIRSF PIRSF000728 13 297 2.1E-107 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CHH28_RS17840 20620b38e88b879bdfb995666fa06b81 724 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 544 706 7.6E-39 T 29-03-2018 IPR020992 Tail specific protease, C-terminal CHH28_RS17840 20620b38e88b879bdfb995666fa06b81 724 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 243 324 4.0E-11 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS17840 20620b38e88b879bdfb995666fa06b81 724 Gene3D G3DSA:2.30.42.10 252 348 4.5E-13 T 29-03-2018 CHH28_RS17840 20620b38e88b879bdfb995666fa06b81 724 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 203 561 6.1E-94 T 29-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CHH28_RS17840 20620b38e88b879bdfb995666fa06b81 724 SUPERFAMILY SSF52096 177 268 2.15E-67 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS17840 20620b38e88b879bdfb995666fa06b81 724 SUPERFAMILY SSF52096 355 546 2.15E-67 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS17840 20620b38e88b879bdfb995666fa06b81 724 Pfam PF03572 Peptidase family S41 366 538 1.4E-49 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CHH28_RS17840 20620b38e88b879bdfb995666fa06b81 724 SUPERFAMILY SSF50156 248 327 1.79E-10 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS17840 20620b38e88b879bdfb995666fa06b81 724 SMART SM00245 331 541 9.2E-53 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CHH28_RS17840 20620b38e88b879bdfb995666fa06b81 724 Gene3D G3DSA:3.90.226.10 349 644 2.6E-54 T 29-03-2018 CHH28_RS17840 20620b38e88b879bdfb995666fa06b81 724 Gene3D G3DSA:3.30.750.44 160 251 3.3E-21 T 29-03-2018 CHH28_RS17840 20620b38e88b879bdfb995666fa06b81 724 SMART SM00228 250 328 6.8E-8 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS13005 2cd0cce95f80f439d703e3789706f330 627 Gene3D G3DSA:2.60.40.10 34 144 1.7E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS15605 f9588f9b774caf0fc02ae3bea357d9fa 366 SUPERFAMILY SSF58104 51 275 4.84E-48 T 29-03-2018 CHH28_RS15605 f9588f9b774caf0fc02ae3bea357d9fa 366 Gene3D G3DSA:1.10.287.950 54 248 2.8E-43 T 29-03-2018 CHH28_RS15605 f9588f9b774caf0fc02ae3bea357d9fa 366 Pfam PF13682 Chemoreceptor zinc-binding domain 257 323 2.0E-12 T 29-03-2018 IPR025991 Chemoreceptor zinc-binding domain CHH28_RS15605 f9588f9b774caf0fc02ae3bea357d9fa 366 SMART SM00283 33 263 2.3E-27 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS15605 f9588f9b774caf0fc02ae3bea357d9fa 366 Gene3D G3DSA:1.10.287.450 326 357 0.11 T 29-03-2018 CHH28_RS15605 f9588f9b774caf0fc02ae3bea357d9fa 366 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 113 247 1.1E-32 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS08700 896a8f06a70d636e9c0e49a7c0156da0 388 Gene3D G3DSA:2.40.10.10 165 275 4.4E-39 T 29-03-2018 CHH28_RS08700 896a8f06a70d636e9c0e49a7c0156da0 388 Pfam PF13180 PDZ domain 287 375 7.7E-12 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS08700 896a8f06a70d636e9c0e49a7c0156da0 388 SUPERFAMILY SSF50156 245 370 5.65E-18 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS08700 896a8f06a70d636e9c0e49a7c0156da0 388 Gene3D G3DSA:2.30.42.10 282 387 2.5E-20 T 29-03-2018 CHH28_RS08700 896a8f06a70d636e9c0e49a7c0156da0 388 SUPERFAMILY SSF50494 58 278 2.81E-63 T 29-03-2018 IPR009003 Peptidase S1, PA clan CHH28_RS08700 896a8f06a70d636e9c0e49a7c0156da0 388 Pfam PF13365 Trypsin-like peptidase domain 114 248 1.1E-33 T 29-03-2018 CHH28_RS08700 896a8f06a70d636e9c0e49a7c0156da0 388 SMART SM00228 287 370 9.5E-10 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS08700 896a8f06a70d636e9c0e49a7c0156da0 388 Gene3D G3DSA:2.40.10.10 59 164 6.5E-32 T 29-03-2018 CHH28_RS08700 896a8f06a70d636e9c0e49a7c0156da0 388 PRINTS PR00834 HtrA/DegQ protease family signature 123 135 1.3E-53 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CHH28_RS08700 896a8f06a70d636e9c0e49a7c0156da0 388 PRINTS PR00834 HtrA/DegQ protease family signature 219 236 1.3E-53 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CHH28_RS08700 896a8f06a70d636e9c0e49a7c0156da0 388 PRINTS PR00834 HtrA/DegQ protease family signature 328 340 1.3E-53 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CHH28_RS08700 896a8f06a70d636e9c0e49a7c0156da0 388 PRINTS PR00834 HtrA/DegQ protease family signature 241 258 1.3E-53 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CHH28_RS08700 896a8f06a70d636e9c0e49a7c0156da0 388 PRINTS PR00834 HtrA/DegQ protease family signature 144 164 1.3E-53 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CHH28_RS08700 896a8f06a70d636e9c0e49a7c0156da0 388 PRINTS PR00834 HtrA/DegQ protease family signature 184 208 1.3E-53 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CHH28_RS13290 81f82966afd61ceb0838403c862db975 253 PIRSF PIRSF006648 5 250 8.7E-21 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CHH28_RS13290 81f82966afd61ceb0838403c862db975 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 55 77 1.1E-12 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CHH28_RS13290 81f82966afd61ceb0838403c862db975 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 135 159 1.1E-12 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CHH28_RS13290 81f82966afd61ceb0838403c862db975 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 1.1E-12 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CHH28_RS13290 81f82966afd61ceb0838403c862db975 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 99 124 1.1E-12 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CHH28_RS13290 81f82966afd61ceb0838403c862db975 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 1.1E-12 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CHH28_RS13290 81f82966afd61ceb0838403c862db975 253 Pfam PF01061 ABC-2 type transporter 6 214 1.4E-34 T 29-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CHH28_RS13475 64b99a7bf11dc005a229a1f023a6c07a 723 SUPERFAMILY SSF53335 410 720 1.92E-63 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS13475 64b99a7bf11dc005a229a1f023a6c07a 723 Gene3D G3DSA:3.40.50.150 167 399 4.0E-29 T 29-03-2018 CHH28_RS13475 64b99a7bf11dc005a229a1f023a6c07a 723 Gene3D G3DSA:3.30.750.80 407 511 1.2E-6 T 29-03-2018 CHH28_RS13475 64b99a7bf11dc005a229a1f023a6c07a 723 SUPERFAMILY SSF53335 148 228 2.48E-31 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS13475 64b99a7bf11dc005a229a1f023a6c07a 723 SUPERFAMILY SSF53335 269 382 2.48E-31 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS13475 64b99a7bf11dc005a229a1f023a6c07a 723 Gene3D G3DSA:3.40.50.150 512 723 3.4E-38 T 29-03-2018 CHH28_RS13475 64b99a7bf11dc005a229a1f023a6c07a 723 Pfam PF01170 Putative RNA methylase family UPF0020 169 383 1.6E-43 T 29-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS13475 64b99a7bf11dc005a229a1f023a6c07a 723 SMART SM00981 64 161 9.8E-13 T 29-03-2018 IPR004114 THUMP domain GO:0003723 CHH28_RS13475 64b99a7bf11dc005a229a1f023a6c07a 723 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 318 324 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CHH28_RS13475 64b99a7bf11dc005a229a1f023a6c07a 723 PIRSF PIRSF037618 8 723 1.5E-287 T 29-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS13475 64b99a7bf11dc005a229a1f023a6c07a 723 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 206 217 - T 29-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS13475 64b99a7bf11dc005a229a1f023a6c07a 723 Pfam PF02926 THUMP domain 45 159 8.8E-9 T 29-03-2018 IPR004114 THUMP domain GO:0003723 CHH28_RS13475 64b99a7bf11dc005a229a1f023a6c07a 723 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 12 723 30.573 T 29-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS13475 64b99a7bf11dc005a229a1f023a6c07a 723 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 489 680 5.3E-21 T 29-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CHH28_RS13425 74fd97bee8f9ff37f5e79dfebc6d6efa 1618 Gene3D G3DSA:3.40.50.720 934 1241 8.8E-49 T 29-03-2018 CHH28_RS13425 74fd97bee8f9ff37f5e79dfebc6d6efa 1618 SUPERFAMILY SSF51735 1079 1214 1.97E-26 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS13425 74fd97bee8f9ff37f5e79dfebc6d6efa 1618 SUPERFAMILY SSF51735 941 1043 1.97E-26 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS13425 74fd97bee8f9ff37f5e79dfebc6d6efa 1618 PIRSF PIRSF036761 3 1604 0.0 T 29-03-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 CHH28_RS13425 74fd97bee8f9ff37f5e79dfebc6d6efa 1618 SUPERFAMILY SSF53223 750 951 1.25E-25 T 29-03-2018 CHH28_RS13425 74fd97bee8f9ff37f5e79dfebc6d6efa 1618 Gene3D G3DSA:3.40.50.10860 792 919 0.0032 T 29-03-2018 CHH28_RS13425 74fd97bee8f9ff37f5e79dfebc6d6efa 1618 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 66 1597 0.0 T 29-03-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 CHH28_RS10315 b5614f28c933fedfce543a033c09440f 68 Pfam PF11391 Protein of unknown function (DUF2798) 9 67 1.1E-20 T 29-03-2018 IPR021529 Protein of unknown function DUF2798 CHH28_RS10085 788cbfc6913aedfebbf62e91df2ef0a2 421 Pfam PF01523 Putative modulator of DNA gyrase 20 301 1.4E-25 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CHH28_RS10085 788cbfc6913aedfebbf62e91df2ef0a2 421 SUPERFAMILY SSF111283 2 420 5.89E-54 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CHH28_RS10085 788cbfc6913aedfebbf62e91df2ef0a2 421 Gene3D G3DSA:3.30.2290.10 1 212 3.2E-13 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain CHH28_RS00985 37aa2991e80ee4cd3838992ffae4031c 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 443 1.5E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS00985 37aa2991e80ee4cd3838992ffae4031c 453 SUPERFAMILY SSF47384 223 288 3.73E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS00985 37aa2991e80ee4cd3838992ffae4031c 453 Gene3D G3DSA:1.10.287.130 197 282 9.4E-5 T 29-03-2018 CHH28_RS00985 37aa2991e80ee4cd3838992ffae4031c 453 Gene3D G3DSA:3.30.565.10 283 444 8.2E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS00985 37aa2991e80ee4cd3838992ffae4031c 453 SUPERFAMILY SSF55874 305 444 4.32E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS00985 37aa2991e80ee4cd3838992ffae4031c 453 SMART SM00387 342 448 2.9E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18905 15bf00cb5e46d60f86b129a392f9d2a5 1344 Gene3D G3DSA:1.20.1330.10 40 229 1.3E-47 T 29-03-2018 CHH28_RS18905 15bf00cb5e46d60f86b129a392f9d2a5 1344 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.4E-42 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CHH28_RS18905 15bf00cb5e46d60f86b129a392f9d2a5 1344 SUPERFAMILY SSF64518 987 1343 1.23E-33 T 29-03-2018 CHH28_RS18905 15bf00cb5e46d60f86b129a392f9d2a5 1344 SUPERFAMILY SSF64518 1 328 2.35E-50 T 29-03-2018 CHH28_RS18905 15bf00cb5e46d60f86b129a392f9d2a5 1344 SUPERFAMILY SSF64518 412 495 2.35E-50 T 29-03-2018 CHH28_RS18905 15bf00cb5e46d60f86b129a392f9d2a5 1344 Pfam PF07196 Flagellin hook IN motif 254 293 7.0E-5 T 29-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 CHH28_RS18905 15bf00cb5e46d60f86b129a392f9d2a5 1344 Pfam PF00700 Bacterial flagellin C-terminal helical region 1258 1343 4.9E-25 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CHH28_RS18905 15bf00cb5e46d60f86b129a392f9d2a5 1344 Gene3D G3DSA:1.20.1330.10 664 1307 1.6E-9 T 29-03-2018 CHH28_RS18905 15bf00cb5e46d60f86b129a392f9d2a5 1344 PRINTS PR00207 Flagellin signature 111 134 5.0E-24 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CHH28_RS18905 15bf00cb5e46d60f86b129a392f9d2a5 1344 PRINTS PR00207 Flagellin signature 37 54 5.0E-24 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CHH28_RS18905 15bf00cb5e46d60f86b129a392f9d2a5 1344 PRINTS PR00207 Flagellin signature 76 95 5.0E-24 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CHH28_RS01030 50025668d552bb47889838922f4bd38d 393 SUPERFAMILY SSF46626 286 388 6.57E-5 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS01030 50025668d552bb47889838922f4bd38d 393 Gene3D G3DSA:1.10.760.10 297 391 5.5E-7 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS01030 50025668d552bb47889838922f4bd38d 393 Pfam PF06181 Urate oxidase N-terminal 4 298 4.0E-130 T 29-03-2018 IPR010389 Urate oxidase N-terminal CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 SUPERFAMILY SSF50621 227 359 1.26E-47 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 SUPERFAMILY SSF51419 9 234 4.45E-60 T 29-03-2018 IPR029066 PLP-binding barrel CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 TIGRFAM TIGR00492 alr: alanine racemase 4 358 1.8E-105 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 PRINTS PR00992 Alanine racemase signature 287 304 1.1E-61 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 PRINTS PR00992 Alanine racemase signature 154 165 1.1E-61 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 PRINTS PR00992 Alanine racemase signature 192 219 1.1E-61 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 PRINTS PR00992 Alanine racemase signature 266 281 1.1E-61 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 PRINTS PR00992 Alanine racemase signature 26 42 1.1E-61 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 PRINTS PR00992 Alanine racemase signature 249 264 1.1E-61 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 PRINTS PR00992 Alanine racemase signature 60 78 1.1E-61 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 PRINTS PR00992 Alanine racemase signature 120 132 1.1E-61 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 PRINTS PR00992 Alanine racemase signature 342 355 1.1E-61 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 Hamap MF_01201 Alanine racemase. 2 360 33.15 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 Pfam PF00842 Alanine racemase, C-terminal domain 233 358 1.1E-42 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 Pfam PF01168 Alanine racemase, N-terminal domain 9 219 3.4E-62 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 SMART SM01005 233 360 1.9E-64 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 29-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 Gene3D G3DSA:3.20.20.10 2 216 5.5E-42 T 29-03-2018 IPR029066 PLP-binding barrel CHH28_RS07700 d2f190689b708a6de243c0279724bf2d 361 Gene3D G3DSA:2.40.37.10 217 361 7.9E-57 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CHH28_RS06670 e7fc54dfc7745b6327539fe79b29c592 601 SUPERFAMILY SSF51230 528 601 8.38E-22 T 29-03-2018 IPR011053 Single hybrid motif CHH28_RS06670 e7fc54dfc7745b6327539fe79b29c592 601 SUPERFAMILY SSF89000 300 451 3.88E-51 T 29-03-2018 CHH28_RS06670 e7fc54dfc7745b6327539fe79b29c592 601 SUPERFAMILY SSF51569 5 303 4.03E-89 T 29-03-2018 CHH28_RS06670 e7fc54dfc7745b6327539fe79b29c592 601 Pfam PF02436 Conserved carboxylase domain 295 484 1.4E-55 T 29-03-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CHH28_RS06670 e7fc54dfc7745b6327539fe79b29c592 601 Pfam PF00364 Biotin-requiring enzyme 535 600 6.1E-16 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CHH28_RS06670 e7fc54dfc7745b6327539fe79b29c592 601 Pfam PF00682 HMGL-like 8 273 1.5E-45 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CHH28_RS06670 e7fc54dfc7745b6327539fe79b29c592 601 Gene3D G3DSA:3.20.20.70 1 287 1.5E-77 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS06670 e7fc54dfc7745b6327539fe79b29c592 601 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 10 597 3.3E-254 T 29-03-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 CHH28_RS06670 e7fc54dfc7745b6327539fe79b29c592 601 Gene3D G3DSA:1.10.10.60 402 447 7.5E-13 T 29-03-2018 CHH28_RS06670 e7fc54dfc7745b6327539fe79b29c592 601 Gene3D G3DSA:2.40.50.100 502 601 3.9E-19 T 29-03-2018 CHH28_RS15715 7cb5210557c5fa8f31dd5c6ff0d1ec51 337 SUPERFAMILY SSF53756 2 335 3.77E-74 T 29-03-2018 CHH28_RS15715 7cb5210557c5fa8f31dd5c6ff0d1ec51 337 Gene3D G3DSA:3.40.50.2000 169 337 2.0E-35 T 29-03-2018 CHH28_RS15715 7cb5210557c5fa8f31dd5c6ff0d1ec51 337 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 299 9.3E-109 T 29-03-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 CHH28_RS15715 7cb5210557c5fa8f31dd5c6ff0d1ec51 337 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 309 1.1E-63 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CHH28_RS15715 7cb5210557c5fa8f31dd5c6ff0d1ec51 337 Gene3D G3DSA:3.40.50.2000 1 160 4.8E-38 T 29-03-2018 CHH28_RS18920 9e53046ff716e79c8728790a1aed8466 323 Gene3D G3DSA:1.10.530.10 155 308 7.5E-32 T 29-03-2018 CHH28_RS18920 9e53046ff716e79c8728790a1aed8466 323 SMART SM00047 151 321 1.8E-30 T 29-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CHH28_RS18920 9e53046ff716e79c8728790a1aed8466 323 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 13 305 3.9E-86 T 29-03-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 CHH28_RS18920 9e53046ff716e79c8728790a1aed8466 323 Pfam PF10135 Rod binding protein 51 100 9.0E-15 T 29-03-2018 IPR019301 Flagellar protein FlgJ, N-terminal CHH28_RS18920 9e53046ff716e79c8728790a1aed8466 323 PRINTS PR01002 Flagellar protein FlgJ signature 28 51 3.4E-29 T 29-03-2018 CHH28_RS18920 9e53046ff716e79c8728790a1aed8466 323 PRINTS PR01002 Flagellar protein FlgJ signature 249 270 3.4E-29 T 29-03-2018 CHH28_RS18920 9e53046ff716e79c8728790a1aed8466 323 PRINTS PR01002 Flagellar protein FlgJ signature 205 226 3.4E-29 T 29-03-2018 CHH28_RS18920 9e53046ff716e79c8728790a1aed8466 323 PRINTS PR01002 Flagellar protein FlgJ signature 292 310 3.4E-29 T 29-03-2018 CHH28_RS18920 9e53046ff716e79c8728790a1aed8466 323 PRINTS PR01002 Flagellar protein FlgJ signature 185 203 3.4E-29 T 29-03-2018 CHH28_RS18920 9e53046ff716e79c8728790a1aed8466 323 PRINTS PR01002 Flagellar protein FlgJ signature 227 248 3.4E-29 T 29-03-2018 CHH28_RS18920 9e53046ff716e79c8728790a1aed8466 323 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 172 305 9.4E-22 T 29-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 Gene3D G3DSA:1.10.288.10 947 1003 8.0E-25 T 29-03-2018 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 Gene3D G3DSA:3.20.20.20 354 652 9.0E-71 T 29-03-2018 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 PIRSF PIRSF000381 11 1204 0.0 T 29-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 Gene3D G3DSA:1.10.288.10 1024 1093 4.1E-19 T 29-03-2018 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 SUPERFAMILY SSF47644 659 746 7.98E-29 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 SUPERFAMILY SSF82282 17 408 2.62E-116 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 Pfam PF00809 Pterin binding enzyme 369 607 1.6E-56 T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 Gene3D G3DSA:1.10.1240.10 653 740 5.9E-37 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 Pfam PF02607 B12 binding domain 667 739 3.8E-25 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 SMART SM01018 664 747 5.0E-45 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 Gene3D G3DSA:3.10.196.10 1094 1235 8.9E-65 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 SUPERFAMILY SSF52242 750 903 8.37E-46 T 29-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 Pfam PF02574 Homocysteine S-methyltransferase 27 334 2.5E-81 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 Pfam PF02310 B12 binding domain 756 851 3.0E-20 T 29-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 SUPERFAMILY SSF56507 911 1235 7.19E-126 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 947 1217 4.4E-124 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 Gene3D G3DSA:3.40.50.280 741 913 1.1E-55 T 29-03-2018 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 Gene3D G3DSA:3.20.20.330 10 350 1.1E-113 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 TIGRFAM TIGR02082 metH: methionine synthase 23 1201 0.0 T 29-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CHH28_RS14100 e771726de70c885584a932d44ce2648e 1235 SUPERFAMILY SSF51717 365 639 1.44E-86 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CHH28_RS14825 256bf4be95bb1098916991bf9f5087fb 282 PIRSF PIRSF028069 32 280 3.0E-82 T 29-03-2018 IPR016866 Uncharacterised conserved protein UCP028069 CHH28_RS14825 256bf4be95bb1098916991bf9f5087fb 282 Gene3D G3DSA:1.20.120.330 37 209 1.9E-5 T 29-03-2018 CHH28_RS14825 256bf4be95bb1098916991bf9f5087fb 282 Pfam PF11932 Protein of unknown function (DUF3450) 42 275 7.1E-85 T 29-03-2018 IPR016866 Uncharacterised conserved protein UCP028069 CHH28_RS03310 ff9c105bb12f80557d5bdd628db7b267 436 Pfam PF00557 Metallopeptidase family M24 180 412 2.1E-66 T 29-03-2018 IPR000994 Peptidase M24 CHH28_RS03310 ff9c105bb12f80557d5bdd628db7b267 436 Gene3D G3DSA:3.90.230.10 172 436 1.7E-84 T 29-03-2018 CHH28_RS03310 ff9c105bb12f80557d5bdd628db7b267 436 SMART SM01011 3 137 3.8E-65 T 29-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CHH28_RS03310 ff9c105bb12f80557d5bdd628db7b267 436 SUPERFAMILY SSF55920 175 432 8.77E-86 T 29-03-2018 IPR000994 Peptidase M24 CHH28_RS03310 ff9c105bb12f80557d5bdd628db7b267 436 SUPERFAMILY SSF53092 3 174 8.37E-51 T 29-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal CHH28_RS03310 ff9c105bb12f80557d5bdd628db7b267 436 Gene3D G3DSA:3.40.350.10 1 171 1.8E-48 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CHH28_RS03310 ff9c105bb12f80557d5bdd628db7b267 436 PRINTS PR00599 Methionine aminopeptidase-1 signature 370 382 4.6E-5 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CHH28_RS03310 ff9c105bb12f80557d5bdd628db7b267 436 PRINTS PR00599 Methionine aminopeptidase-1 signature 252 268 4.6E-5 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CHH28_RS03310 ff9c105bb12f80557d5bdd628db7b267 436 Pfam PF05195 Aminopeptidase P, N-terminal domain 8 127 3.6E-37 T 29-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CHH28_RS00705 924760670863aa5d7921c4c96a012195 345 Gene3D G3DSA:2.40.40.20 275 340 6.0E-10 T 29-03-2018 CHH28_RS00705 924760670863aa5d7921c4c96a012195 345 Gene3D G3DSA:3.40.630.30 1 273 3.2E-20 T 29-03-2018 CHH28_RS00705 924760670863aa5d7921c4c96a012195 345 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 6.2E-121 T 29-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CHH28_RS00705 924760670863aa5d7921c4c96a012195 345 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 1.5E-121 T 29-03-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CHH28_RS00705 924760670863aa5d7921c4c96a012195 345 SUPERFAMILY SSF55729 1 339 8.31E-123 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS00705 924760670863aa5d7921c4c96a012195 345 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 338 2.3E-129 T 29-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CHH28_RS15840 5ce8614bae3b851ea2d5b7745584ee3c 1212 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1044 1129 7.5E-19 T 29-03-2018 CHH28_RS15840 5ce8614bae3b851ea2d5b7745584ee3c 1212 Pfam PF13555 P-loop containing region of AAA domain 3 57 2.9E-10 T 29-03-2018 CHH28_RS15840 5ce8614bae3b851ea2d5b7745584ee3c 1212 Gene3D G3DSA:3.40.50.300 1 529 1.3E-10 T 29-03-2018 CHH28_RS15840 5ce8614bae3b851ea2d5b7745584ee3c 1212 Gene3D G3DSA:3.90.20.10 673 897 7.2E-4 T 29-03-2018 CHH28_RS15840 5ce8614bae3b851ea2d5b7745584ee3c 1212 SUPERFAMILY SSF52540 975 1139 7.39E-9 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS15840 5ce8614bae3b851ea2d5b7745584ee3c 1212 SUPERFAMILY SSF52540 18 50 7.39E-9 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS17110 7c743a2cfb0ace55a8db60678796fd3a 307 Gene3D G3DSA:1.10.760.10 218 307 1.7E-15 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS17110 7c743a2cfb0ace55a8db60678796fd3a 307 SUPERFAMILY SSF46626 115 218 2.47E-32 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS17110 7c743a2cfb0ace55a8db60678796fd3a 307 SUPERFAMILY SSF46626 56 79 2.47E-32 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS17110 7c743a2cfb0ace55a8db60678796fd3a 307 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 38 78 2.4E-21 T 29-03-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal CHH28_RS17110 7c743a2cfb0ace55a8db60678796fd3a 307 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 135 209 1.9E-14 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS17110 7c743a2cfb0ace55a8db60678796fd3a 307 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 221 299 9.3E-9 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS17110 7c743a2cfb0ace55a8db60678796fd3a 307 PIRSF PIRSF000006 2 307 8.5E-92 T 29-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III CHH28_RS17110 7c743a2cfb0ace55a8db60678796fd3a 307 Gene3D G3DSA:1.10.760.10 99 217 5.3E-26 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS17110 7c743a2cfb0ace55a8db60678796fd3a 307 SUPERFAMILY SSF46626 217 305 6.94E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS17110 7c743a2cfb0ace55a8db60678796fd3a 307 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 33 306 5.7E-81 T 29-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III CHH28_RS14265 0acd1fbfb73f77e8b10d80240743bf77 201 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 39 53 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CHH28_RS14265 0acd1fbfb73f77e8b10d80240743bf77 201 Gene3D G3DSA:3.30.70.1560 83 164 3.4E-26 T 29-03-2018 CHH28_RS14265 0acd1fbfb73f77e8b10d80240743bf77 201 Gene3D G3DSA:3.30.70.580 2 82 2.9E-18 T 29-03-2018 CHH28_RS14265 0acd1fbfb73f77e8b10d80240743bf77 201 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 8 174 1.7E-52 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CHH28_RS14265 0acd1fbfb73f77e8b10d80240743bf77 201 SUPERFAMILY SSF55120 4 184 1.92E-43 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS14265 0acd1fbfb73f77e8b10d80240743bf77 201 Pfam PF00849 RNA pseudouridylate synthase 4 148 6.5E-16 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS16130 1a5d15f24a92f4bf515d526db2b9eeec 642 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 298 2.0E-75 T 29-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CHH28_RS16130 1a5d15f24a92f4bf515d526db2b9eeec 642 SUPERFAMILY SSF51735 415 555 1.45E-30 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS16130 1a5d15f24a92f4bf515d526db2b9eeec 642 Gene3D G3DSA:3.40.50.720 408 532 1.3E-17 T 29-03-2018 CHH28_RS16130 1a5d15f24a92f4bf515d526db2b9eeec 642 Gene3D G3DSA:1.20.91.10 244 325 9.6E-12 T 29-03-2018 CHH28_RS16130 1a5d15f24a92f4bf515d526db2b9eeec 642 Pfam PF02254 TrkA-N domain 418 532 3.2E-20 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CHH28_RS16130 1a5d15f24a92f4bf515d526db2b9eeec 642 Pfam PF00999 Sodium/hydrogen exchanger family 10 389 1.4E-56 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CHH28_RS11905 bb1c17f8fdc5876ef47552c4ae3b63e6 334 Gene3D G3DSA:3.30.930.10 7 334 1.3E-93 T 29-03-2018 CHH28_RS11905 bb1c17f8fdc5876ef47552c4ae3b63e6 334 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 333 49.387 T 29-03-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CHH28_RS11905 bb1c17f8fdc5876ef47552c4ae3b63e6 334 Pfam PF01409 tRNA synthetases class II core domain (F) 92 333 5.5E-109 T 29-03-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CHH28_RS11905 bb1c17f8fdc5876ef47552c4ae3b63e6 334 SUPERFAMILY SSF46589 12 99 8.89E-22 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 CHH28_RS11905 bb1c17f8fdc5876ef47552c4ae3b63e6 334 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 333 9.0E-112 T 29-03-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CHH28_RS11905 bb1c17f8fdc5876ef47552c4ae3b63e6 334 SUPERFAMILY SSF55681 92 334 1.54E-81 T 29-03-2018 CHH28_RS11905 bb1c17f8fdc5876ef47552c4ae3b63e6 334 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 5.4E-27 T 29-03-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CHH28_RS15260 5905bcb733f8e68dca26646aa0cee0ea 302 SUPERFAMILY SSF46689 201 249 5.82E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS15260 5905bcb733f8e68dca26646aa0cee0ea 302 SMART SM00342 215 297 1.7E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS15260 5905bcb733f8e68dca26646aa0cee0ea 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 297 8.9E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS15260 5905bcb733f8e68dca26646aa0cee0ea 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 281 8.9E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS15260 5905bcb733f8e68dca26646aa0cee0ea 302 Pfam PF12833 Helix-turn-helix domain 221 299 1.6E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS15260 5905bcb733f8e68dca26646aa0cee0ea 302 Gene3D G3DSA:1.10.10.60 190 248 8.8E-12 T 29-03-2018 CHH28_RS15260 5905bcb733f8e68dca26646aa0cee0ea 302 SUPERFAMILY SSF46689 252 299 2.91E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS15260 5905bcb733f8e68dca26646aa0cee0ea 302 Gene3D G3DSA:1.10.10.60 249 301 3.5E-15 T 29-03-2018 CHH28_RS15260 5905bcb733f8e68dca26646aa0cee0ea 302 Pfam PF06719 AraC-type transcriptional regulator N-terminus 30 185 1.1E-29 T 29-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal CHH28_RS02320 7c5e167c440b9f53e51d92d17306591f 481 Gene3D G3DSA:3.30.70.260 301 398 3.9E-8 T 29-03-2018 CHH28_RS02320 7c5e167c440b9f53e51d92d17306591f 481 SUPERFAMILY SSF53633 5 317 1.8E-49 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CHH28_RS02320 7c5e167c440b9f53e51d92d17306591f 481 Gene3D G3DSA:3.30.70.260 399 471 4.1E-12 T 29-03-2018 CHH28_RS02320 7c5e167c440b9f53e51d92d17306591f 481 Gene3D G3DSA:3.40.1160.10 3 300 2.8E-37 T 29-03-2018 CHH28_RS02320 7c5e167c440b9f53e51d92d17306591f 481 Pfam PF13840 ACT domain 405 465 1.5E-8 T 29-03-2018 IPR027795 GATS-like ACT domain CHH28_RS02320 7c5e167c440b9f53e51d92d17306591f 481 Pfam PF00696 Amino acid kinase family 4 302 4.1E-21 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CHH28_RS02320 7c5e167c440b9f53e51d92d17306591f 481 SUPERFAMILY SSF55021 406 470 9.16E-14 T 29-03-2018 CHH28_RS04065 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS12210 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS16470 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS13430 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS04110 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS07050 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS04130 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS02760 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS10335 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS02630 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS04650 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS06315 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS17360 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS19200 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS09935 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS02255 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS06675 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS08330 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS07905 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS02665 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS07940 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS18210 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS02715 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS01015 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS07545 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS04200 f8e39af8e2047fa1c23c8ecafeb7acd2 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 9.6E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS01340 c657899638510b1c049fe7ac75d9ac1a 323 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 322 8.3E-128 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CHH28_RS01340 c657899638510b1c049fe7ac75d9ac1a 323 SUPERFAMILY SSF53659 3 322 6.24E-110 T 29-03-2018 CHH28_RS01340 c657899638510b1c049fe7ac75d9ac1a 323 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 322 35.054 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CHH28_RS01340 c657899638510b1c049fe7ac75d9ac1a 323 Gene3D G3DSA:3.40.718.10 1 323 7.1E-132 T 29-03-2018 CHH28_RS01340 c657899638510b1c049fe7ac75d9ac1a 323 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 30 318 2.0E-106 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CHH28_RS08975 ec9943f21dfaff58f974d043ad8cf3eb 1164 Gene3D G3DSA:3.40.50.920 274 397 2.1E-8 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CHH28_RS08975 ec9943f21dfaff58f974d043ad8cf3eb 1164 SUPERFAMILY SSF52922 266 395 1.22E-8 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CHH28_RS08975 ec9943f21dfaff58f974d043ad8cf3eb 1164 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 452 577 3.8E-6 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CHH28_RS08975 ec9943f21dfaff58f974d043ad8cf3eb 1164 SUPERFAMILY SSF53323 718 966 1.83E-28 T 29-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CHH28_RS08975 ec9943f21dfaff58f974d043ad8cf3eb 1164 Gene3D G3DSA:3.40.920.10 718 931 1.2E-46 T 29-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CHH28_RS08975 ec9943f21dfaff58f974d043ad8cf3eb 1164 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 728 915 1.6E-24 T 29-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CHH28_RS08975 ec9943f21dfaff58f974d043ad8cf3eb 1164 Gene3D G3DSA:3.40.50.970 16 273 1.1E-20 T 29-03-2018 CHH28_RS08975 ec9943f21dfaff58f974d043ad8cf3eb 1164 SUPERFAMILY SSF52518 19 201 1.06E-19 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CHH28_RS08975 ec9943f21dfaff58f974d043ad8cf3eb 1164 SUPERFAMILY SSF52518 432 619 1.01E-12 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CHH28_RS08975 ec9943f21dfaff58f974d043ad8cf3eb 1164 Gene3D G3DSA:3.40.50.970 437 615 1.1E-26 T 29-03-2018 CHH28_RS07875 d29426052fa2f4df4cbcffe38bab29ee 662 SUPERFAMILY SSF51126 44 312 1.13E-36 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CHH28_RS07875 d29426052fa2f4df4cbcffe38bab29ee 662 Pfam PF05860 haemagglutination activity domain 32 141 4.2E-26 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal CHH28_RS07875 d29426052fa2f4df4cbcffe38bab29ee 662 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 63 140 7.1E-20 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal CHH28_RS07875 d29426052fa2f4df4cbcffe38bab29ee 662 Gene3D G3DSA:2.160.20.10 32 334 1.8E-38 T 29-03-2018 IPR012334 Pectin lyase fold CHH28_RS07875 d29426052fa2f4df4cbcffe38bab29ee 662 SMART SM00912 45 146 2.2E-14 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal CHH28_RS07875 d29426052fa2f4df4cbcffe38bab29ee 662 Gene3D G3DSA:2.160.20.10 347 643 0.044 T 29-03-2018 IPR012334 Pectin lyase fold CHH28_RS16660 3b087fd6468a1c2fe17d9fab9d8a66db 299 Pfam PF00892 EamA-like transporter family 9 138 8.4E-11 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS16660 3b087fd6468a1c2fe17d9fab9d8a66db 299 Pfam PF00892 EamA-like transporter family 145 274 3.0E-9 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS16660 3b087fd6468a1c2fe17d9fab9d8a66db 299 SUPERFAMILY SSF103481 42 140 3.27E-12 T 29-03-2018 CHH28_RS16660 3b087fd6468a1c2fe17d9fab9d8a66db 299 SUPERFAMILY SSF103481 184 279 1.31E-10 T 29-03-2018 CHH28_RS07730 dc9f882f36097047d32985eaddea3f74 475 SUPERFAMILY SSF48452 101 168 3.29E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS07730 dc9f882f36097047d32985eaddea3f74 475 Gene3D G3DSA:2.40.160.10 179 473 0.0012 T 29-03-2018 CHH28_RS07730 dc9f882f36097047d32985eaddea3f74 475 Pfam PF14559 Tetratricopeptide repeat 105 164 1.3E-9 T 29-03-2018 CHH28_RS07730 dc9f882f36097047d32985eaddea3f74 475 Gene3D G3DSA:1.25.40.10 91 178 2.3E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS03925 0b99efa94c62adc8af99e85ee74c1b89 280 Gene3D G3DSA:1.10.12.10 222 272 4.7E-11 T 29-03-2018 IPR014748 Crontonase, C-terminal CHH28_RS03925 0b99efa94c62adc8af99e85ee74c1b89 280 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 270 2.6E-42 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CHH28_RS03925 0b99efa94c62adc8af99e85ee74c1b89 280 Gene3D G3DSA:3.90.226.10 1 221 3.0E-57 T 29-03-2018 CHH28_RS03925 0b99efa94c62adc8af99e85ee74c1b89 280 SUPERFAMILY SSF52096 4 270 1.09E-72 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS04575 06718db7402620ce05ad95c167d778e3 705 Gene3D G3DSA:1.10.287.130 222 292 3.0E-13 T 29-03-2018 CHH28_RS04575 06718db7402620ce05ad95c167d778e3 705 SMART SM00448 469 580 1.3E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS04575 06718db7402620ce05ad95c167d778e3 705 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 450 3.8E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04575 06718db7402620ce05ad95c167d778e3 705 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 292 4.5E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS04575 06718db7402620ce05ad95c167d778e3 705 Gene3D G3DSA:3.40.50.2300 465 677 1.0E-26 T 29-03-2018 CHH28_RS04575 06718db7402620ce05ad95c167d778e3 705 SMART SM00388 232 297 1.2E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS04575 06718db7402620ce05ad95c167d778e3 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 450 3.4E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS04575 06718db7402620ce05ad95c167d778e3 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 3.4E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS04575 06718db7402620ce05ad95c167d778e3 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 3.4E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS04575 06718db7402620ce05ad95c167d778e3 705 Pfam PF00072 Response regulator receiver domain 471 580 4.2E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS04575 06718db7402620ce05ad95c167d778e3 705 SUPERFAMILY SSF55874 287 452 9.95E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04575 06718db7402620ce05ad95c167d778e3 705 SMART SM00387 343 453 7.6E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04575 06718db7402620ce05ad95c167d778e3 705 Gene3D G3DSA:3.30.565.10 302 455 1.5E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04575 06718db7402620ce05ad95c167d778e3 705 SUPERFAMILY SSF52172 469 586 3.56E-28 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS04575 06718db7402620ce05ad95c167d778e3 705 SUPERFAMILY SSF47384 219 296 2.55E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS06950 423cbad397fa3bdd7f85c0fc36348353 387 Pfam PF00162 Phosphoglycerate kinase 6 373 7.9E-141 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06950 423cbad397fa3bdd7f85c0fc36348353 387 SUPERFAMILY SSF53748 4 383 8.6E-146 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06950 423cbad397fa3bdd7f85c0fc36348353 387 Gene3D G3DSA:3.40.50.1260 175 371 2.9E-78 T 29-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06950 423cbad397fa3bdd7f85c0fc36348353 387 Gene3D G3DSA:3.40.50.1260 3 174 5.6E-62 T 29-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06950 423cbad397fa3bdd7f85c0fc36348353 387 PIRSF PIRSF000724 1 387 5.8E-133 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06950 423cbad397fa3bdd7f85c0fc36348353 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.425 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06950 423cbad397fa3bdd7f85c0fc36348353 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 1.8E-84 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06950 423cbad397fa3bdd7f85c0fc36348353 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.8E-84 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06950 423cbad397fa3bdd7f85c0fc36348353 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.8E-84 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06950 423cbad397fa3bdd7f85c0fc36348353 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.8E-84 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06950 423cbad397fa3bdd7f85c0fc36348353 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.8E-84 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06950 423cbad397fa3bdd7f85c0fc36348353 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.8E-84 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06950 423cbad397fa3bdd7f85c0fc36348353 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.8E-84 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06950 423cbad397fa3bdd7f85c0fc36348353 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 1.8E-84 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06950 423cbad397fa3bdd7f85c0fc36348353 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 1.8E-84 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06950 423cbad397fa3bdd7f85c0fc36348353 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 29-03-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS16340 7ab4bf0e730f4e54653f764dbc297f94 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 107 2.2E-7 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CHH28_RS16340 7ab4bf0e730f4e54653f764dbc297f94 127 SUPERFAMILY SSF54593 1 121 2.89E-25 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS16340 7ab4bf0e730f4e54653f764dbc297f94 127 Gene3D G3DSA:3.10.180.10 1 127 4.6E-20 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS03765 7e3347f50e706ce4a6da0177a6cbaf5b 296 SUPERFAMILY SSF56112 7 260 9.57E-33 T 29-03-2018 IPR011009 Protein kinase-like domain CHH28_RS03765 7e3347f50e706ce4a6da0177a6cbaf5b 296 Gene3D G3DSA:3.90.1200.10 51 274 6.0E-25 T 29-03-2018 CHH28_RS03765 7e3347f50e706ce4a6da0177a6cbaf5b 296 Pfam PF01636 Phosphotransferase enzyme family 28 236 6.3E-26 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CHH28_RS11955 cc3756f580550d6cd5844295c7971482 121 Pfam PF13031 Protein of unknown function (DUF3892) 32 119 2.0E-7 T 29-03-2018 IPR024997 Protein of unknown function DUF3892 CHH28_RS08040 fcef1c52b1440ae272e40878900892a9 492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 2.2E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS08040 fcef1c52b1440ae272e40878900892a9 492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 482 2.2E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS08040 fcef1c52b1440ae272e40878900892a9 492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 463 2.2E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS08040 fcef1c52b1440ae272e40878900892a9 492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 438 2.2E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS08040 fcef1c52b1440ae272e40878900892a9 492 SMART SM00304 183 235 0.0021 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS08040 fcef1c52b1440ae272e40878900892a9 492 Gene3D G3DSA:3.30.565.10 329 485 2.0E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS08040 fcef1c52b1440ae272e40878900892a9 492 SUPERFAMILY SSF158472 185 232 7.32E-6 T 29-03-2018 CHH28_RS08040 fcef1c52b1440ae272e40878900892a9 492 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 484 4.8E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS08040 fcef1c52b1440ae272e40878900892a9 492 SUPERFAMILY SSF55874 312 484 1.96E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS08040 fcef1c52b1440ae272e40878900892a9 492 Pfam PF00512 His Kinase A (phospho-acceptor) domain 257 319 5.2E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS08040 fcef1c52b1440ae272e40878900892a9 492 SMART SM00388 257 322 1.4E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS08040 fcef1c52b1440ae272e40878900892a9 492 SUPERFAMILY SSF47384 242 322 1.63E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS08040 fcef1c52b1440ae272e40878900892a9 492 Gene3D G3DSA:1.10.287.130 227 316 3.8E-13 T 29-03-2018 CHH28_RS08040 fcef1c52b1440ae272e40878900892a9 492 SMART SM00387 370 485 2.5E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS16690 55cd342246716be70a328669ae97e729 252 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 239 8.9E-13 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS16690 55cd342246716be70a328669ae97e729 252 SUPERFAMILY SSF53850 16 239 2.46E-25 T 29-03-2018 CHH28_RS16690 55cd342246716be70a328669ae97e729 252 Gene3D G3DSA:3.40.190.10 18 121 1.8E-7 T 29-03-2018 CHH28_RS16690 55cd342246716be70a328669ae97e729 252 Gene3D G3DSA:3.40.190.10 135 243 4.3E-9 T 29-03-2018 CHH28_RS17710 95db35b4d88b3dd38aaeef1b9df7d1f7 341 Pfam PF00579 tRNA synthetases class I (W and Y) 5 290 3.1E-55 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS17710 95db35b4d88b3dd38aaeef1b9df7d1f7 341 SUPERFAMILY SSF52374 4 335 3.75E-80 T 29-03-2018 CHH28_RS17710 95db35b4d88b3dd38aaeef1b9df7d1f7 341 Gene3D G3DSA:1.10.240.10 214 331 1.2E-26 T 29-03-2018 CHH28_RS17710 95db35b4d88b3dd38aaeef1b9df7d1f7 341 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 336 35.335 T 29-03-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 CHH28_RS17710 95db35b4d88b3dd38aaeef1b9df7d1f7 341 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 335 7.2E-90 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CHH28_RS17710 95db35b4d88b3dd38aaeef1b9df7d1f7 341 Gene3D G3DSA:3.40.50.620 2 213 1.2E-59 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS17710 95db35b4d88b3dd38aaeef1b9df7d1f7 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 2.8E-21 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CHH28_RS17710 95db35b4d88b3dd38aaeef1b9df7d1f7 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 151 172 2.8E-21 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CHH28_RS17710 95db35b4d88b3dd38aaeef1b9df7d1f7 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 68 87 2.8E-21 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CHH28_RS17710 95db35b4d88b3dd38aaeef1b9df7d1f7 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 206 216 2.8E-21 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CHH28_RS14815 7fbf4412c6ee3ecd6e71eca9bdd51926 167 Pfam PF01618 MotA/TolQ/ExbB proton channel family 58 160 6.4E-23 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CHH28_RS18895 35f5b7f6bd17e26a49ef6d42d4c2c906 1316 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 108 9.8E-18 T 29-03-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 CHH28_RS18895 35f5b7f6bd17e26a49ef6d42d4c2c906 1316 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 242 432 2.3E-35 T 29-03-2018 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 CHH28_RS18895 35f5b7f6bd17e26a49ef6d42d4c2c906 1316 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 1225 1298 6.8E-6 T 29-03-2018 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 CHH28_RS18895 35f5b7f6bd17e26a49ef6d42d4c2c906 1316 Pfam PF07196 Flagellin hook IN motif 154 196 4.7E-6 T 29-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 CHH28_RS17580 3e6387c5c86797b5e6699872649eec4c 401 Pfam PF03631 Virulence factor BrkB 31 269 6.6E-51 T 29-03-2018 IPR017039 Virulence factor BrkB CHH28_RS17580 3e6387c5c86797b5e6699872649eec4c 401 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 267 3.6E-64 T 29-03-2018 IPR017039 Virulence factor BrkB CHH28_RS17580 3e6387c5c86797b5e6699872649eec4c 401 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 1 301 20.902 T 29-03-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial CHH28_RS16550 dfe43486c20a00e8d5ecad54086b0cb6 457 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 378 455 8.6E-15 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CHH28_RS16550 dfe43486c20a00e8d5ecad54086b0cb6 457 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 379 455 2.3E-17 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CHH28_RS16550 dfe43486c20a00e8d5ecad54086b0cb6 457 SUPERFAMILY SSF74653 345 456 3.92E-14 T 29-03-2018 CHH28_RS16550 dfe43486c20a00e8d5ecad54086b0cb6 457 Gene3D G3DSA:3.30.1150.10 364 453 4.5E-14 T 29-03-2018 CHH28_RS11835 ff5c4bbe9b7316c0a4d3349fdcd4057a 386 SMART SM00283 87 335 2.0E-11 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS11835 ff5c4bbe9b7316c0a4d3349fdcd4057a 386 Gene3D G3DSA:1.10.287.950 48 342 1.6E-34 T 29-03-2018 CHH28_RS11835 ff5c4bbe9b7316c0a4d3349fdcd4057a 386 SUPERFAMILY SSF58104 107 343 3.4E-39 T 29-03-2018 CHH28_RS11835 ff5c4bbe9b7316c0a4d3349fdcd4057a 386 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 154 270 3.3E-27 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS04470 b09c42542718126f2e7ca74771a5ea6d 693 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 1.2E-205 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CHH28_RS04470 b09c42542718126f2e7ca74771a5ea6d 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 9.3E-32 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CHH28_RS04470 b09c42542718126f2e7ca74771a5ea6d 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 319 335 9.3E-32 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CHH28_RS04470 b09c42542718126f2e7ca74771a5ea6d 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 395 414 9.3E-32 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CHH28_RS04470 b09c42542718126f2e7ca74771a5ea6d 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 9.3E-32 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CHH28_RS04470 b09c42542718126f2e7ca74771a5ea6d 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 248 263 9.3E-32 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CHH28_RS04470 b09c42542718126f2e7ca74771a5ea6d 693 Gene3D G3DSA:1.10.730.10 575 683 3.2E-13 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS04470 b09c42542718126f2e7ca74771a5ea6d 693 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 690 1.3E-245 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CHH28_RS04470 b09c42542718126f2e7ca74771a5ea6d 693 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 690 25.259 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CHH28_RS04470 b09c42542718126f2e7ca74771a5ea6d 693 Pfam PF05746 DALR anticodon binding domain 583 678 6.4E-9 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CHH28_RS04470 b09c42542718126f2e7ca74771a5ea6d 693 SUPERFAMILY SSF109604 359 493 3.56E-13 T 29-03-2018 CHH28_RS02075 919d019b23c64df9609a47d2590503aa 673 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 333 3.5E-82 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CHH28_RS02075 919d019b23c64df9609a47d2590503aa 673 Gene3D G3DSA:3.20.20.70 4 371 1.1E-106 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS02075 919d019b23c64df9609a47d2590503aa 673 SUPERFAMILY SSF51395 1 364 1.05E-105 T 29-03-2018 CHH28_RS02075 919d019b23c64df9609a47d2590503aa 673 Gene3D G3DSA:3.50.50.60 488 629 4.4E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS02075 919d019b23c64df9609a47d2590503aa 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 379 398 1.3E-15 T 29-03-2018 CHH28_RS02075 919d019b23c64df9609a47d2590503aa 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 622 638 1.3E-15 T 29-03-2018 CHH28_RS02075 919d019b23c64df9609a47d2590503aa 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 461 479 1.3E-15 T 29-03-2018 CHH28_RS02075 919d019b23c64df9609a47d2590503aa 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 501 519 1.3E-15 T 29-03-2018 CHH28_RS02075 919d019b23c64df9609a47d2590503aa 673 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 378 639 5.0E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS02075 919d019b23c64df9609a47d2590503aa 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 623 637 4.4E-5 T 29-03-2018 CHH28_RS02075 919d019b23c64df9609a47d2590503aa 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 378 400 4.4E-5 T 29-03-2018 CHH28_RS02075 919d019b23c64df9609a47d2590503aa 673 SUPERFAMILY SSF51905 375 609 6.6E-42 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS02075 919d019b23c64df9609a47d2590503aa 673 Gene3D G3DSA:3.50.50.60 377 487 3.5E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS00625 7c92b2d254c26d2e0d2ade8a7a5a199b 235 SUPERFAMILY SSF52172 1 130 2.85E-34 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS00625 7c92b2d254c26d2e0d2ade8a7a5a199b 235 Gene3D G3DSA:3.40.50.2300 1 130 8.2E-32 T 29-03-2018 CHH28_RS00625 7c92b2d254c26d2e0d2ade8a7a5a199b 235 SUPERFAMILY SSF46894 136 229 1.33E-16 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CHH28_RS00625 7c92b2d254c26d2e0d2ade8a7a5a199b 235 SMART SM00448 2 118 9.8E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS00625 7c92b2d254c26d2e0d2ade8a7a5a199b 235 SMART SM00862 153 227 3.0E-11 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS00625 7c92b2d254c26d2e0d2ade8a7a5a199b 235 Pfam PF00072 Response regulator receiver domain 4 118 2.9E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS00625 7c92b2d254c26d2e0d2ade8a7a5a199b 235 Gene3D G3DSA:1.10.10.10 131 234 4.6E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS00625 7c92b2d254c26d2e0d2ade8a7a5a199b 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 227 9.1E-16 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 Gene3D G3DSA:1.10.420.10 231 398 1.5E-45 T 29-03-2018 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 Gene3D G3DSA:1.10.420.10 597 703 7.8E-34 T 29-03-2018 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 Hamap MF_01961 Catalase-peroxidase [katG]. 6 725 39.404 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 Pfam PF00141 Peroxidase 76 397 2.4E-50 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 Pfam PF00141 Peroxidase 405 702 4.7E-37 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 SUPERFAMILY SSF48113 436 724 1.62E-103 T 29-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 10 725 0.0 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 SUPERFAMILY SSF48113 19 430 8.69E-152 T 29-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 PRINTS PR00458 Haem peroxidase superfamily signature 89 103 5.6E-18 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 PRINTS PR00458 Haem peroxidase superfamily signature 167 179 5.6E-18 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 PRINTS PR00458 Haem peroxidase superfamily signature 317 332 5.6E-18 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 PRINTS PR00458 Haem peroxidase superfamily signature 258 273 5.6E-18 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 PRINTS PR00458 Haem peroxidase superfamily signature 149 166 5.6E-18 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 Gene3D G3DSA:1.10.520.10 55 214 1.5E-37 T 29-03-2018 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 266 289 9.2E-52 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 51 64 9.2E-52 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 25 47 9.2E-52 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 66 91 9.2E-52 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 480 506 9.2E-52 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 Gene3D G3DSA:1.10.520.10 442 596 5.1E-39 T 29-03-2018 CHH28_RS00635 5e87451d8231e9f985c133233f1bc34b 725 ProSitePatterns PS00436 Peroxidases active site signature. 89 100 - T 29-03-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 CHH28_RS02290 a679c81a5992396e9f6c9e744ce7fcb4 138 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 107 5.5E-15 T 29-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CHH28_RS02290 a679c81a5992396e9f6c9e744ce7fcb4 138 Gene3D G3DSA:3.90.1590.10 2 129 2.8E-26 T 29-03-2018 CHH28_RS02290 a679c81a5992396e9f6c9e744ce7fcb4 138 SUPERFAMILY SSF51316 6 124 8.47E-35 T 29-03-2018 IPR011057 Mss4-like CHH28_RS09930 f88f20d722e0a2490765cf6eb86403b7 535 SUPERFAMILY SSF55874 395 533 5.37E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS09930 f88f20d722e0a2490765cf6eb86403b7 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 513 4.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS09930 f88f20d722e0a2490765cf6eb86403b7 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 532 4.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS09930 f88f20d722e0a2490765cf6eb86403b7 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 478 4.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS09930 f88f20d722e0a2490765cf6eb86403b7 535 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 429 533 1.0E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS09930 f88f20d722e0a2490765cf6eb86403b7 535 Gene3D G3DSA:3.30.450.20 35 249 0.0015 T 29-03-2018 CHH28_RS09930 f88f20d722e0a2490765cf6eb86403b7 535 Gene3D G3DSA:3.30.565.10 388 535 7.4E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS09930 f88f20d722e0a2490765cf6eb86403b7 535 Pfam PF00512 His Kinase A (phospho-acceptor) domain 285 387 1.3E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS09930 f88f20d722e0a2490765cf6eb86403b7 535 SMART SM00387 427 535 1.1E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS09930 f88f20d722e0a2490765cf6eb86403b7 535 SMART SM00388 285 387 4.4E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS09930 f88f20d722e0a2490765cf6eb86403b7 535 Gene3D G3DSA:1.10.287.130 250 382 1.1E-8 T 29-03-2018 CHH28_RS09930 f88f20d722e0a2490765cf6eb86403b7 535 SUPERFAMILY SSF47384 355 383 1.51E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS09930 f88f20d722e0a2490765cf6eb86403b7 535 SUPERFAMILY SSF47384 280 320 1.51E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS02795 a42c9c154450f3585b8f4830b6886036 480 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 224 231 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CHH28_RS02795 a42c9c154450f3585b8f4830b6886036 480 PIRSF PIRSF036492 4 480 4.1E-165 T 29-03-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 CHH28_RS02795 a42c9c154450f3585b8f4830b6886036 480 Gene3D G3DSA:3.40.309.10 244 430 9.7E-56 T 29-03-2018 CHH28_RS02795 a42c9c154450f3585b8f4830b6886036 480 SUPERFAMILY SSF53720 13 475 1.18E-115 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CHH28_RS02795 a42c9c154450f3585b8f4830b6886036 480 Pfam PF00171 Aldehyde dehydrogenase family 17 450 3.8E-88 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS02795 a42c9c154450f3585b8f4830b6886036 480 Gene3D G3DSA:3.40.605.10 5 243 3.3E-62 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS18050 fe4ed0f3f03000e18261881fb37f0e0f 123 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 121 1.0E-15 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 CHH28_RS18050 fe4ed0f3f03000e18261881fb37f0e0f 123 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 121 5.7E-32 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 CHH28_RS01575 83a05cb45eadd10e6ae8eca3b8e7db60 723 SMART SM00631 126 455 6.2E-49 T 29-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CHH28_RS01575 83a05cb45eadd10e6ae8eca3b8e7db60 723 ProSitePatterns PS00133 Zinc carboxypeptidases, zinc-binding region 2 signature. 346 356 - T 29-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CHH28_RS01575 83a05cb45eadd10e6ae8eca3b8e7db60 723 Gene3D G3DSA:3.40.630.10 124 446 1.3E-53 T 29-03-2018 CHH28_RS01575 83a05cb45eadd10e6ae8eca3b8e7db60 723 Pfam PF00246 Zinc carboxypeptidase 133 429 2.5E-50 T 29-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CHH28_RS01575 83a05cb45eadd10e6ae8eca3b8e7db60 723 SUPERFAMILY SSF53187 121 444 3.31E-64 T 29-03-2018 CHH28_RS18435 9440e3b4fcba1e8540f5577767b4e983 93 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 2.3E-35 T 29-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase CHH28_RS18435 9440e3b4fcba1e8540f5577767b4e983 93 SUPERFAMILY SSF51182 1 92 2.8E-34 T 29-03-2018 IPR011051 RmlC-like cupin domain CHH28_RS18435 9440e3b4fcba1e8540f5577767b4e983 93 Gene3D G3DSA:2.60.120.10 3 92 3.2E-34 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS18435 9440e3b4fcba1e8540f5577767b4e983 93 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 93 24.232 T 29-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase CHH28_RS07630 b9dee75c979bb9d9d4e31b5815f2bd96 336 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 29-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CHH28_RS07630 b9dee75c979bb9d9d4e31b5815f2bd96 336 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 335 5.1E-82 T 29-03-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 CHH28_RS07630 b9dee75c979bb9d9d4e31b5815f2bd96 336 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.6E-16 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CHH28_RS07630 b9dee75c979bb9d9d4e31b5815f2bd96 336 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.6E-16 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CHH28_RS07630 b9dee75c979bb9d9d4e31b5815f2bd96 336 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 8.6E-16 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CHH28_RS07630 b9dee75c979bb9d9d4e31b5815f2bd96 336 Gene3D G3DSA:3.40.50.40 210 336 7.2E-36 T 29-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 CHH28_RS07630 b9dee75c979bb9d9d4e31b5815f2bd96 336 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 29-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CHH28_RS07630 b9dee75c979bb9d9d4e31b5815f2bd96 336 Gene3D G3DSA:3.40.50.1170 1 198 1.9E-65 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CHH28_RS07630 b9dee75c979bb9d9d4e31b5815f2bd96 336 PIRSF PIRSF500176 2 332 1.4E-90 T 29-03-2018 CHH28_RS07630 b9dee75c979bb9d9d4e31b5815f2bd96 336 Pfam PF00710 Asparaginase, N-terminal 5 183 1.0E-54 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CHH28_RS07630 b9dee75c979bb9d9d4e31b5815f2bd96 336 SMART SM00870 5 323 9.0E-98 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CHH28_RS07630 b9dee75c979bb9d9d4e31b5815f2bd96 336 PIRSF PIRSF001220 1 334 6.6E-77 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CHH28_RS07630 b9dee75c979bb9d9d4e31b5815f2bd96 336 SUPERFAMILY SSF53774 4 335 1.13E-92 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CHH28_RS09510 6fa90c9fba25ba0d80868e68a6f2f003 145 PRINTS PR00421 Thioredoxin family signature 64 73 7.6E-8 T 29-03-2018 CHH28_RS09510 6fa90c9fba25ba0d80868e68a6f2f003 145 PRINTS PR00421 Thioredoxin family signature 104 115 7.6E-8 T 29-03-2018 CHH28_RS09510 6fa90c9fba25ba0d80868e68a6f2f003 145 PRINTS PR00421 Thioredoxin family signature 56 64 7.6E-8 T 29-03-2018 CHH28_RS09510 6fa90c9fba25ba0d80868e68a6f2f003 145 TIGRFAM TIGR01068 thioredoxin: thioredoxin 42 139 7.8E-35 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CHH28_RS09510 6fa90c9fba25ba0d80868e68a6f2f003 145 PIRSF PIRSF000077 35 140 3.6E-34 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CHH28_RS09510 6fa90c9fba25ba0d80868e68a6f2f003 145 Gene3D G3DSA:3.40.30.10 35 145 3.0E-32 T 29-03-2018 CHH28_RS09510 6fa90c9fba25ba0d80868e68a6f2f003 145 SUPERFAMILY SSF52833 25 141 1.15E-37 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS09510 6fa90c9fba25ba0d80868e68a6f2f003 145 Pfam PF00085 Thioredoxin 40 138 4.5E-29 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 CHH28_RS09510 6fa90c9fba25ba0d80868e68a6f2f003 145 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CHH28_RS08840 8f05ec5b96459a7725a25a934d9e2cb4 410 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 402 1.4E-117 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CHH28_RS08840 8f05ec5b96459a7725a25a934d9e2cb4 410 Gene3D G3DSA:3.40.1160.10 1 234 5.0E-75 T 29-03-2018 CHH28_RS08840 8f05ec5b96459a7725a25a934d9e2cb4 410 SUPERFAMILY SSF55021 248 326 1.34E-18 T 29-03-2018 CHH28_RS08840 8f05ec5b96459a7725a25a934d9e2cb4 410 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CHH28_RS08840 8f05ec5b96459a7725a25a934d9e2cb4 410 Pfam PF01842 ACT domain 269 324 7.7E-10 T 29-03-2018 IPR002912 ACT domain CHH28_RS08840 8f05ec5b96459a7725a25a934d9e2cb4 410 SUPERFAMILY SSF55021 331 404 7.64E-24 T 29-03-2018 CHH28_RS08840 8f05ec5b96459a7725a25a934d9e2cb4 410 Gene3D G3DSA:3.30.70.260 331 402 7.1E-21 T 29-03-2018 CHH28_RS08840 8f05ec5b96459a7725a25a934d9e2cb4 410 Pfam PF13840 ACT domain 338 398 2.0E-15 T 29-03-2018 IPR027795 GATS-like ACT domain CHH28_RS08840 8f05ec5b96459a7725a25a934d9e2cb4 410 Gene3D G3DSA:3.30.70.260 235 330 1.0E-23 T 29-03-2018 CHH28_RS08840 8f05ec5b96459a7725a25a934d9e2cb4 410 Pfam PF00696 Amino acid kinase family 4 229 6.3E-50 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CHH28_RS08840 8f05ec5b96459a7725a25a934d9e2cb4 410 PIRSF PIRSF000726 54 410 1.8E-143 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CHH28_RS08840 8f05ec5b96459a7725a25a934d9e2cb4 410 PIRSF PIRSF000726 1 61 4.2E-20 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CHH28_RS08840 8f05ec5b96459a7725a25a934d9e2cb4 410 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 2 402 1.6E-131 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CHH28_RS08840 8f05ec5b96459a7725a25a934d9e2cb4 410 SUPERFAMILY SSF53633 4 241 7.85E-75 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CHH28_RS15355 f9206a9000bdc3fe2f109c539a06f27e 283 Pfam PF05971 Protein of unknown function (DUF890) 1 283 2.0E-100 T 29-03-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 CHH28_RS15355 f9206a9000bdc3fe2f109c539a06f27e 283 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 1 283 44.431 T 29-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 CHH28_RS15355 f9206a9000bdc3fe2f109c539a06f27e 283 Gene3D G3DSA:3.40.50.150 31 283 1.8E-50 T 29-03-2018 CHH28_RS15355 f9206a9000bdc3fe2f109c539a06f27e 283 SUPERFAMILY SSF53335 37 283 1.24E-22 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS15355 f9206a9000bdc3fe2f109c539a06f27e 283 PIRSF PIRSF029038 1 283 3.8E-116 T 29-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 CHH28_RS07010 cd6eb8efb38952f43e81d0ab7eecf3d2 323 Gene3D G3DSA:3.40.630.30 137 319 2.6E-27 T 29-03-2018 CHH28_RS07010 cd6eb8efb38952f43e81d0ab7eecf3d2 323 SUPERFAMILY SSF55729 1 126 1.18E-22 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS07010 cd6eb8efb38952f43e81d0ab7eecf3d2 323 Pfam PF00583 Acetyltransferase (GNAT) family 39 117 6.8E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS07010 cd6eb8efb38952f43e81d0ab7eecf3d2 323 Gene3D G3DSA:3.40.630.30 1 136 4.0E-22 T 29-03-2018 CHH28_RS07010 cd6eb8efb38952f43e81d0ab7eecf3d2 323 SUPERFAMILY SSF55729 150 293 1.45E-42 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS07010 cd6eb8efb38952f43e81d0ab7eecf3d2 323 Pfam PF13302 Acetyltransferase (GNAT) domain 157 293 9.5E-36 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS04165 ea0e82708e797ab9127ff9ed5e9009b6 535 Gene3D G3DSA:3.90.226.10 275 530 9.8E-67 T 29-03-2018 CHH28_RS04165 ea0e82708e797ab9127ff9ed5e9009b6 535 SUPERFAMILY SSF52096 238 517 1.29E-83 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS04165 ea0e82708e797ab9127ff9ed5e9009b6 535 Gene3D G3DSA:3.90.226.10 9 274 5.3E-74 T 29-03-2018 CHH28_RS04165 ea0e82708e797ab9127ff9ed5e9009b6 535 SUPERFAMILY SSF52096 23 270 9.82E-74 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS04165 ea0e82708e797ab9127ff9ed5e9009b6 535 Pfam PF01039 Carboxyl transferase domain 48 523 1.5E-152 T 29-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 CHH28_RS02315 284016748ec8a62a0ae2f0c105030422 257 Gene3D G3DSA:1.25.40.10 209 242 1.2E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS02315 284016748ec8a62a0ae2f0c105030422 257 Gene3D G3DSA:1.25.40.10 108 208 5.6E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS02315 284016748ec8a62a0ae2f0c105030422 257 SUPERFAMILY SSF48452 161 238 4.51E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS02155 1cca1ba4b30eb35b265f67a2983147b9 789 Gene3D G3DSA:3.40.630.30 7 176 1.3E-11 T 29-03-2018 CHH28_RS02155 1cca1ba4b30eb35b265f67a2983147b9 789 Pfam PF13523 Acetyltransferase (GNAT) domain 20 159 1.9E-37 T 29-03-2018 CHH28_RS02155 1cca1ba4b30eb35b265f67a2983147b9 789 Pfam PF04183 IucA / IucC family 331 581 2.6E-69 T 29-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 CHH28_RS02155 1cca1ba4b30eb35b265f67a2983147b9 789 Pfam PF06276 Ferric iron reductase FhuF-like transporter 603 759 2.2E-37 T 29-03-2018 IPR022770 Ferric iron reductase FhuF domain CHH28_RS02155 1cca1ba4b30eb35b265f67a2983147b9 789 SUPERFAMILY SSF55729 12 171 1.22E-29 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS02155 1cca1ba4b30eb35b265f67a2983147b9 789 SMART SM01006 15 62 8.6E-12 T 29-03-2018 IPR019432 Siderophore biosynthesis protein, conserved domain CHH28_RS17630 095c3985695eabbdd1ee4247bf476d00 98 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 2 92 2.2E-48 T 29-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CHH28_RS17630 095c3985695eabbdd1ee4247bf476d00 98 SMART SM00411 1 91 5.8E-42 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS17630 095c3985695eabbdd1ee4247bf476d00 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CHH28_RS17630 095c3985695eabbdd1ee4247bf476d00 98 Pfam PF00216 Bacterial DNA-binding protein 1 91 9.8E-30 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS17630 095c3985695eabbdd1ee4247bf476d00 98 Gene3D G3DSA:4.10.520.10 1 94 1.7E-31 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CHH28_RS17630 095c3985695eabbdd1ee4247bf476d00 98 SUPERFAMILY SSF47729 1 91 3.97E-31 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CHH28_RS17630 095c3985695eabbdd1ee4247bf476d00 98 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.9E-18 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS17630 095c3985695eabbdd1ee4247bf476d00 98 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.9E-18 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS17630 095c3985695eabbdd1ee4247bf476d00 98 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.9E-18 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS17630 095c3985695eabbdd1ee4247bf476d00 98 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.573 T 29-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CHH28_RS12775 0d7d4ca703183a18a2d7e3dd5d81dac6 623 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 137 590 2.6E-215 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CHH28_RS12775 0d7d4ca703183a18a2d7e3dd5d81dac6 623 Pfam PF13667 ThiC-associated domain 21 98 4.3E-31 T 29-03-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CHH28_RS12775 0d7d4ca703183a18a2d7e3dd5d81dac6 623 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 137 592 55.848 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CHH28_RS12775 0d7d4ca703183a18a2d7e3dd5d81dac6 623 Pfam PF01964 Radical SAM ThiC family 139 587 1.2E-198 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CHH28_RS19375 d7954472be3271c96b33c3f5d2a53c92 981 PRINTS PR00344 Bacterial sensor protein C-terminal signature 916 926 6.5E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS19375 d7954472be3271c96b33c3f5d2a53c92 981 PRINTS PR00344 Bacterial sensor protein C-terminal signature 929 947 6.5E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS19375 d7954472be3271c96b33c3f5d2a53c92 981 PRINTS PR00344 Bacterial sensor protein C-terminal signature 898 912 6.5E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS19375 d7954472be3271c96b33c3f5d2a53c92 981 PRINTS PR00344 Bacterial sensor protein C-terminal signature 955 968 6.5E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS19375 d7954472be3271c96b33c3f5d2a53c92 981 Pfam PF00512 His Kinase A (phospho-acceptor) domain 754 816 2.5E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS19375 d7954472be3271c96b33c3f5d2a53c92 981 SUPERFAMILY SSF47384 749 816 2.55E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS19375 d7954472be3271c96b33c3f5d2a53c92 981 SUPERFAMILY SSF55874 813 974 4.06E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS19375 d7954472be3271c96b33c3f5d2a53c92 981 SUPERFAMILY SSF55785 629 730 8.57E-10 T 29-03-2018 IPR000014 PAS domain CHH28_RS19375 d7954472be3271c96b33c3f5d2a53c92 981 SMART SM00091 630 698 4.6E-4 T 29-03-2018 IPR000014 PAS domain CHH28_RS19375 d7954472be3271c96b33c3f5d2a53c92 981 Gene3D G3DSA:1.10.287.130 747 814 1.4E-13 T 29-03-2018 CHH28_RS19375 d7954472be3271c96b33c3f5d2a53c92 981 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 861 969 2.6E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS19375 d7954472be3271c96b33c3f5d2a53c92 981 Gene3D G3DSA:3.30.565.10 820 981 4.0E-41 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS19375 d7954472be3271c96b33c3f5d2a53c92 981 Pfam PF00989 PAS fold 633 678 2.6E-6 T 29-03-2018 IPR013767 PAS fold GO:0006355 CHH28_RS19375 d7954472be3271c96b33c3f5d2a53c92 981 Gene3D G3DSA:3.30.450.20 620 746 2.7E-17 T 29-03-2018 CHH28_RS19375 d7954472be3271c96b33c3f5d2a53c92 981 SMART SM00387 861 971 1.0E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS19375 d7954472be3271c96b33c3f5d2a53c92 981 SMART SM00388 753 818 7.7E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS05765 4181d07ad9ef1794e90799f3080f2887 354 Gene3D G3DSA:3.40.190.10 167 319 1.4E-19 T 29-03-2018 CHH28_RS05765 4181d07ad9ef1794e90799f3080f2887 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 79 92 1.4E-46 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05765 4181d07ad9ef1794e90799f3080f2887 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 298 324 1.4E-46 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05765 4181d07ad9ef1794e90799f3080f2887 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 1.4E-46 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05765 4181d07ad9ef1794e90799f3080f2887 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 112 128 1.4E-46 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05765 4181d07ad9ef1794e90799f3080f2887 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 253 272 1.4E-46 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05765 4181d07ad9ef1794e90799f3080f2887 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 35 56 1.4E-46 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05765 4181d07ad9ef1794e90799f3080f2887 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 1.4E-46 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05765 4181d07ad9ef1794e90799f3080f2887 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 19 35 1.4E-46 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05765 4181d07ad9ef1794e90799f3080f2887 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 143 157 1.4E-46 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05765 4181d07ad9ef1794e90799f3080f2887 354 Gene3D G3DSA:3.40.190.10 14 159 1.9E-24 T 29-03-2018 CHH28_RS05765 4181d07ad9ef1794e90799f3080f2887 354 SUPERFAMILY SSF53850 13 353 1.58E-86 T 29-03-2018 CHH28_RS05765 4181d07ad9ef1794e90799f3080f2887 354 Pfam PF13343 Bacterial extracellular solute-binding protein 63 297 6.4E-25 T 29-03-2018 CHH28_RS05765 4181d07ad9ef1794e90799f3080f2887 354 PIRSF PIRSF019574 5 354 2.5E-113 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS09695 fb61b66965b8980151d06103f7a68d39 536 Pfam PF01808 AICARFT/IMPCHase bienzyme 140 467 4.8E-116 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CHH28_RS09695 fb61b66965b8980151d06103f7a68d39 536 SMART SM00851 22 135 3.8E-57 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CHH28_RS09695 fb61b66965b8980151d06103f7a68d39 536 PIRSF PIRSF000414 4 536 2.5E-219 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CHH28_RS09695 fb61b66965b8980151d06103f7a68d39 536 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 10 536 45.025 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CHH28_RS09695 fb61b66965b8980151d06103f7a68d39 536 SUPERFAMILY SSF53927 223 536 3.71E-129 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CHH28_RS09695 fb61b66965b8980151d06103f7a68d39 536 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 11 536 1.5E-240 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CHH28_RS09695 fb61b66965b8980151d06103f7a68d39 536 SMART SM00798 140 468 1.3E-207 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CHH28_RS09695 fb61b66965b8980151d06103f7a68d39 536 Gene3D G3DSA:3.40.50.1380 1 198 5.8E-74 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CHH28_RS09695 fb61b66965b8980151d06103f7a68d39 536 Pfam PF02142 MGS-like domain 22 135 2.0E-28 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CHH28_RS09695 fb61b66965b8980151d06103f7a68d39 536 SUPERFAMILY SSF52335 10 198 2.22E-67 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CHH28_RS09695 fb61b66965b8980151d06103f7a68d39 536 Gene3D G3DSA:3.40.140.20 383 526 5.9E-56 T 29-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CHH28_RS09695 fb61b66965b8980151d06103f7a68d39 536 Gene3D G3DSA:3.40.140.20 230 381 6.4E-48 T 29-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CHH28_RS08270 e4a30dd681fc16a372abd4fb2a368574 284 Gene3D G3DSA:1.10.1660.10 1 166 1.1E-24 T 29-03-2018 CHH28_RS08270 e4a30dd681fc16a372abd4fb2a368574 284 SUPERFAMILY SSF46955 5 95 9.16E-21 T 29-03-2018 IPR009061 Putative DNA-binding domain CHH28_RS08270 e4a30dd681fc16a372abd4fb2a368574 284 SMART SM00422 5 74 7.1E-18 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS08270 e4a30dd681fc16a372abd4fb2a368574 284 Pfam PF13411 MerR HTH family regulatory protein 5 72 5.7E-21 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS16035 07cb73182446012f62781332105d1331 245 Pfam PF13649 Methyltransferase domain 66 162 2.1E-11 T 29-03-2018 CHH28_RS16035 07cb73182446012f62781332105d1331 245 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 9 245 9.7E-80 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CHH28_RS16035 07cb73182446012f62781332105d1331 245 Gene3D G3DSA:3.40.50.150 22 245 6.5E-31 T 29-03-2018 CHH28_RS16035 07cb73182446012f62781332105d1331 245 PIRSF PIRSF006325 5 245 5.2E-92 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CHH28_RS16035 07cb73182446012f62781332105d1331 245 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 7 245 39.67 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CHH28_RS16035 07cb73182446012f62781332105d1331 245 SUPERFAMILY SSF53335 25 245 8.2E-31 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS02605 c7007216eed96debb7a517f90cfb72fb 623 Gene3D G3DSA:3.90.780.10 403 610 4.8E-47 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CHH28_RS02605 c7007216eed96debb7a517f90cfb72fb 623 Pfam PF00149 Calcineurin-like phosphoesterase 48 274 1.9E-6 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CHH28_RS02605 c7007216eed96debb7a517f90cfb72fb 623 SUPERFAMILY SSF55816 397 617 2.35E-42 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CHH28_RS02605 c7007216eed96debb7a517f90cfb72fb 623 Pfam PF02872 5'-nucleotidase, C-terminal domain 430 575 7.3E-31 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CHH28_RS02605 c7007216eed96debb7a517f90cfb72fb 623 ProSitePatterns PS00785 5'-nucleotidase signature 1. 48 60 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CHH28_RS02605 c7007216eed96debb7a517f90cfb72fb 623 TIGRFAM TIGR01530 nadN: NAD nucleotidase 48 600 1.4E-142 T 29-03-2018 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN GO:0008253|GO:0009166 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CHH28_RS02605 c7007216eed96debb7a517f90cfb72fb 623 Gene3D G3DSA:3.60.21.10 36 402 6.5E-81 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS02605 c7007216eed96debb7a517f90cfb72fb 623 PRINTS PR01607 Apyrase family signature 257 280 1.6E-28 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CHH28_RS02605 c7007216eed96debb7a517f90cfb72fb 623 PRINTS PR01607 Apyrase family signature 302 322 1.6E-28 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CHH28_RS02605 c7007216eed96debb7a517f90cfb72fb 623 PRINTS PR01607 Apyrase family signature 550 569 1.6E-28 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CHH28_RS02605 c7007216eed96debb7a517f90cfb72fb 623 PRINTS PR01607 Apyrase family signature 468 491 1.6E-28 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CHH28_RS02605 c7007216eed96debb7a517f90cfb72fb 623 PRINTS PR01607 Apyrase family signature 46 64 1.6E-28 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CHH28_RS02605 c7007216eed96debb7a517f90cfb72fb 623 PRINTS PR01607 Apyrase family signature 238 255 1.6E-28 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CHH28_RS02605 c7007216eed96debb7a517f90cfb72fb 623 SUPERFAMILY SSF56300 375 397 8.86E-77 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS02605 c7007216eed96debb7a517f90cfb72fb 623 SUPERFAMILY SSF56300 43 347 8.86E-77 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS02605 c7007216eed96debb7a517f90cfb72fb 623 ProSitePatterns PS00786 5'-nucleotidase signature 2. 130 141 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CHH28_RS06945 458e57c1ce51c1581043b8c5e27d95ef 336 SUPERFAMILY SSF55347 156 318 3.06E-53 T 29-03-2018 CHH28_RS06945 458e57c1ce51c1581043b8c5e27d95ef 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 113 126 1.5E-24 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06945 458e57c1ce51c1581043b8c5e27d95ef 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 150 168 1.5E-24 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06945 458e57c1ce51c1581043b8c5e27d95ef 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 273 288 1.5E-24 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06945 458e57c1ce51c1581043b8c5e27d95ef 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 233 250 1.5E-24 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06945 458e57c1ce51c1581043b8c5e27d95ef 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 177 193 1.5E-24 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06945 458e57c1ce51c1581043b8c5e27d95ef 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 106 9.1E-35 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06945 458e57c1ce51c1581043b8c5e27d95ef 336 Gene3D G3DSA:3.30.360.10 166 319 2.1E-45 T 29-03-2018 CHH28_RS06945 458e57c1ce51c1581043b8c5e27d95ef 336 PIRSF PIRSF000149 1 336 2.8E-125 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06945 458e57c1ce51c1581043b8c5e27d95ef 336 SUPERFAMILY SSF51735 1 178 1.87E-54 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS06945 458e57c1ce51c1581043b8c5e27d95ef 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 161 316 1.7E-46 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS06945 458e57c1ce51c1581043b8c5e27d95ef 336 Gene3D G3DSA:3.40.50.720 1 165 8.5E-63 T 29-03-2018 CHH28_RS06945 458e57c1ce51c1581043b8c5e27d95ef 336 SMART SM00846 3 156 3.7E-74 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS15460 d6ab480fec2ea542afbb95984ce64b3d 779 Pfam PF00753 Metallo-beta-lactamase superfamily 564 725 3.2E-6 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS15460 d6ab480fec2ea542afbb95984ce64b3d 779 Pfam PF13567 Domain of unknown function (DUF4131) 37 187 1.6E-20 T 29-03-2018 IPR025405 Domain of unknown function DUF4131 CHH28_RS15460 d6ab480fec2ea542afbb95984ce64b3d 779 Gene3D G3DSA:3.60.15.10 522 748 1.9E-17 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS15460 d6ab480fec2ea542afbb95984ce64b3d 779 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 240 426 7.4E-17 T 29-03-2018 IPR004477 ComEC/Rec2-related protein CHH28_RS15460 d6ab480fec2ea542afbb95984ce64b3d 779 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 128 755 8.4E-86 T 29-03-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 CHH28_RS15460 d6ab480fec2ea542afbb95984ce64b3d 779 SUPERFAMILY SSF56281 519 764 9.34E-37 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS15460 d6ab480fec2ea542afbb95984ce64b3d 779 Pfam PF03772 Competence protein 219 492 8.0E-36 T 29-03-2018 IPR004477 ComEC/Rec2-related protein CHH28_RS18735 cab8e9854d4f0d78a6b81ddefd8da5fc 117 Pfam PF04347 Flagellar biosynthesis protein, FliO 37 115 3.7E-16 T 29-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CHH28_RS18735 cab8e9854d4f0d78a6b81ddefd8da5fc 117 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 25 93 2.5E-18 T 29-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CHH28_RS06880 df01a4550a286a71ca87df38b51cf904 203 Pfam PF00925 GTP cyclohydrolase II 7 170 1.0E-68 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CHH28_RS06880 df01a4550a286a71ca87df38b51cf904 203 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 46.821 T 29-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CHH28_RS06880 df01a4550a286a71ca87df38b51cf904 203 SUPERFAMILY SSF142695 3 173 3.01E-67 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CHH28_RS06880 df01a4550a286a71ca87df38b51cf904 203 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 6 194 9.0E-83 T 29-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CHH28_RS10595 a361a5f5fde1e0cd5522728e2118d9dd 132 Pfam PF13586 Transposase DDE domain 44 130 8.1E-12 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS10595 a361a5f5fde1e0cd5522728e2118d9dd 132 Gene3D G3DSA:3.90.350.10 1 118 2.1E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS01105 c9a042598b097326177c7ad9903a8fe4 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 415 519 6.1E-12 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS01105 c9a042598b097326177c7ad9903a8fe4 539 Gene3D G3DSA:1.10.287.130 290 364 1.5E-11 T 29-03-2018 CHH28_RS01105 c9a042598b097326177c7ad9903a8fe4 539 SMART SM00388 296 369 6.5E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS01105 c9a042598b097326177c7ad9903a8fe4 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 500 8.9E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS01105 c9a042598b097326177c7ad9903a8fe4 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 465 8.9E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS01105 c9a042598b097326177c7ad9903a8fe4 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 479 8.9E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS01105 c9a042598b097326177c7ad9903a8fe4 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 519 8.9E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS01105 c9a042598b097326177c7ad9903a8fe4 539 SMART SM00387 410 522 3.6E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS01105 c9a042598b097326177c7ad9903a8fe4 539 Pfam PF00512 His Kinase A (phospho-acceptor) domain 297 364 4.6E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS01105 c9a042598b097326177c7ad9903a8fe4 539 Gene3D G3DSA:1.10.1660.10 59 289 2.5E-4 T 29-03-2018 CHH28_RS01105 c9a042598b097326177c7ad9903a8fe4 539 SUPERFAMILY SSF47384 291 363 8.63E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS01105 c9a042598b097326177c7ad9903a8fe4 539 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 54 120 4.8E-11 T 29-03-2018 IPR033414 Periplasmic sensor domain CHH28_RS01105 c9a042598b097326177c7ad9903a8fe4 539 SUPERFAMILY SSF55874 373 520 2.88E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS01105 c9a042598b097326177c7ad9903a8fe4 539 Gene3D G3DSA:3.30.565.10 370 530 6.8E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS19550 358465095cf367cc6f2f7ddb36c65b44 116 Gene3D G3DSA:3.30.460.10 1 116 1.1E-34 T 29-03-2018 CHH28_RS19550 358465095cf367cc6f2f7ddb36c65b44 116 SUPERFAMILY SSF81301 1 107 1.03E-37 T 29-03-2018 CHH28_RS19550 358465095cf367cc6f2f7ddb36c65b44 116 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 7.6E-28 T 29-03-2018 CHH28_RS19550 358465095cf367cc6f2f7ddb36c65b44 116 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 6.3E-37 T 29-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CHH28_RS19550 358465095cf367cc6f2f7ddb36c65b44 116 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.171 T 29-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CHH28_RS19465 64589c5add724e87edefe011a60cd14b 182 Pfam PF03079 ARD/ARD' family 4 165 1.1E-31 T 29-03-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 CHH28_RS19465 64589c5add724e87edefe011a60cd14b 182 Gene3D G3DSA:2.60.120.10 2 157 5.2E-36 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS19465 64589c5add724e87edefe011a60cd14b 182 SUPERFAMILY SSF51182 4 178 6.58E-39 T 29-03-2018 IPR011051 RmlC-like cupin domain CHH28_RS19465 64589c5add724e87edefe011a60cd14b 182 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 36.666 T 29-03-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389 CHH28_RS07985 fb359a698d80694eb4800299109219c9 516 SUPERFAMILY SSF109604 334 505 1.92E-39 T 29-03-2018 CHH28_RS07985 fb359a698d80694eb4800299109219c9 516 SMART SM00471 337 474 4.1E-8 T 29-03-2018 IPR003607 HD/PDEase domain CHH28_RS07985 fb359a698d80694eb4800299109219c9 516 Gene3D G3DSA:3.40.50.2300 14 157 6.1E-14 T 29-03-2018 CHH28_RS07985 fb359a698d80694eb4800299109219c9 516 Pfam PF01966 HD domain 343 464 2.8E-18 T 29-03-2018 IPR006674 HD domain CHH28_RS07985 fb359a698d80694eb4800299109219c9 516 SUPERFAMILY SSF52172 24 125 1.85E-12 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS07985 fb359a698d80694eb4800299109219c9 516 Gene3D G3DSA:3.30.450.40 160 268 0.043 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS07985 fb359a698d80694eb4800299109219c9 516 Pfam PF11849 Domain of unknown function (DUF3369) 148 318 8.8E-44 T 29-03-2018 IPR021800 Domain of unknown function DUF3369 CHH28_RS07985 fb359a698d80694eb4800299109219c9 516 Gene3D G3DSA:1.10.3210.10 324 514 5.9E-49 T 29-03-2018 CHH28_RS07985 fb359a698d80694eb4800299109219c9 516 Pfam PF00072 Response regulator receiver domain 28 133 2.6E-7 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS16305 11a82b2399f7bca1b3ecb01a7af934d2 222 SUPERFAMILY SSF52833 1 85 1.04E-19 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS16305 11a82b2399f7bca1b3ecb01a7af934d2 222 SUPERFAMILY SSF47616 82 220 6.26E-22 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CHH28_RS16305 11a82b2399f7bca1b3ecb01a7af934d2 222 Gene3D G3DSA:1.20.1050.10 100 222 3.3E-21 T 29-03-2018 CHH28_RS16305 11a82b2399f7bca1b3ecb01a7af934d2 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 1.1E-16 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CHH28_RS16305 11a82b2399f7bca1b3ecb01a7af934d2 222 Gene3D G3DSA:3.40.30.10 1 99 5.5E-23 T 29-03-2018 CHH28_RS16305 11a82b2399f7bca1b3ecb01a7af934d2 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 151 205 8.3E-8 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CHH28_RS16895 d2f2b64ce6808e6fecb6c9713eda26c9 253 SUPERFAMILY SSF55729 18 223 1.84E-40 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS16895 d2f2b64ce6808e6fecb6c9713eda26c9 253 Gene3D G3DSA:3.40.630.30 17 165 2.9E-35 T 29-03-2018 CHH28_RS16895 d2f2b64ce6808e6fecb6c9713eda26c9 253 Pfam PF13444 Acetyltransferase (GNAT) domain 34 134 2.1E-30 T 29-03-2018 CHH28_RS12550 e19755c10e5b54c286af1dff32a8288e 553 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 265 4.7E-10 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS12550 e19755c10e5b54c286af1dff32a8288e 553 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 379 501 1.4E-8 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS12550 e19755c10e5b54c286af1dff32a8288e 553 Gene3D G3DSA:1.10.3720.10 325 547 7.2E-25 T 29-03-2018 CHH28_RS12550 e19755c10e5b54c286af1dff32a8288e 553 SUPERFAMILY SSF161098 292 544 4.45E-36 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS12550 e19755c10e5b54c286af1dff32a8288e 553 SUPERFAMILY SSF161098 13 270 9.03E-45 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS12550 e19755c10e5b54c286af1dff32a8288e 553 Gene3D G3DSA:1.10.3720.10 17 279 4.5E-31 T 29-03-2018 CHH28_RS18100 911e2b9400f10d5e9662d6a3c898142f 431 SUPERFAMILY SSF55021 350 420 5.31E-11 T 29-03-2018 CHH28_RS18100 911e2b9400f10d5e9662d6a3c898142f 431 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 127 1.1E-18 T 29-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CHH28_RS18100 911e2b9400f10d5e9662d6a3c898142f 431 SUPERFAMILY SSF55347 135 300 3.33E-52 T 29-03-2018 CHH28_RS18100 911e2b9400f10d5e9662d6a3c898142f 431 Pfam PF01842 ACT domain 350 415 3.3E-11 T 29-03-2018 IPR002912 ACT domain CHH28_RS18100 911e2b9400f10d5e9662d6a3c898142f 431 SUPERFAMILY SSF51735 3 138 1.08E-31 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS18100 911e2b9400f10d5e9662d6a3c898142f 431 Gene3D G3DSA:3.30.360.10 156 296 5.8E-53 T 29-03-2018 CHH28_RS18100 911e2b9400f10d5e9662d6a3c898142f 431 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 181 203 - T 29-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CHH28_RS18100 911e2b9400f10d5e9662d6a3c898142f 431 Pfam PF00742 Homoserine dehydrogenase 135 313 1.6E-64 T 29-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CHH28_RS18100 911e2b9400f10d5e9662d6a3c898142f 431 Gene3D G3DSA:3.40.50.720 1 155 5.7E-30 T 29-03-2018 CHH28_RS18100 911e2b9400f10d5e9662d6a3c898142f 431 Gene3D G3DSA:3.30.70.260 346 429 4.6E-16 T 29-03-2018 CHH28_RS18100 911e2b9400f10d5e9662d6a3c898142f 431 PIRSF PIRSF000098 1 431 4.0E-162 T 29-03-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CHH28_RS00990 9f77090dcba01fe37b63565d90b2c812 221 Gene3D G3DSA:3.40.50.2300 1 120 5.0E-31 T 29-03-2018 CHH28_RS00990 9f77090dcba01fe37b63565d90b2c812 221 Gene3D G3DSA:1.10.10.10 121 221 3.7E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS00990 9f77090dcba01fe37b63565d90b2c812 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 219 5.4E-21 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS00990 9f77090dcba01fe37b63565d90b2c812 221 SMART SM00448 1 112 7.4E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS00990 9f77090dcba01fe37b63565d90b2c812 221 SUPERFAMILY SSF52172 1 178 5.57E-36 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS00990 9f77090dcba01fe37b63565d90b2c812 221 Pfam PF00072 Response regulator receiver domain 3 112 4.1E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS00990 9f77090dcba01fe37b63565d90b2c812 221 SMART SM00862 144 219 1.2E-21 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS18595 b78f6b4af88c60162461bbecdfe519c0 245 Pfam PF00072 Response regulator receiver domain 15 124 1.6E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS18595 b78f6b4af88c60162461bbecdfe519c0 245 SMART SM00448 13 123 2.3E-39 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS18595 b78f6b4af88c60162461bbecdfe519c0 245 Gene3D G3DSA:1.10.10.10 138 244 7.8E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS18595 b78f6b4af88c60162461bbecdfe519c0 245 Pfam PF00486 Transcriptional regulatory protein, C terminal 165 241 1.4E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS18595 b78f6b4af88c60162461bbecdfe519c0 245 SUPERFAMILY SSF46894 142 242 7.65E-28 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CHH28_RS18595 b78f6b4af88c60162461bbecdfe519c0 245 Gene3D G3DSA:3.40.50.2300 1 137 3.6E-34 T 29-03-2018 CHH28_RS18595 b78f6b4af88c60162461bbecdfe519c0 245 SMART SM00862 165 241 1.8E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS18595 b78f6b4af88c60162461bbecdfe519c0 245 SUPERFAMILY SSF52172 10 131 1.32E-38 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS17720 8b3f01fcfb0d662a06dff66ea78d801b 280 SMART SM00481 5 70 3.1E-19 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CHH28_RS17720 8b3f01fcfb0d662a06dff66ea78d801b 280 Gene3D G3DSA:3.20.20.140 3 262 2.9E-45 T 29-03-2018 CHH28_RS17720 8b3f01fcfb0d662a06dff66ea78d801b 280 Pfam PF02811 PHP domain 6 98 1.2E-8 T 29-03-2018 IPR004013 PHP domain GO:0003824 CHH28_RS17720 8b3f01fcfb0d662a06dff66ea78d801b 280 SUPERFAMILY SSF89550 166 278 2.55E-49 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CHH28_RS17720 8b3f01fcfb0d662a06dff66ea78d801b 280 SUPERFAMILY SSF89550 5 83 2.55E-49 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CHH28_RS05390 07ea530db8222763a2aef8cf46bc078f 330 Gene3D G3DSA:3.20.20.70 7 330 5.0E-71 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS05390 07ea530db8222763a2aef8cf46bc078f 330 SMART SM00729 20 221 1.6E-4 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CHH28_RS05390 07ea530db8222763a2aef8cf46bc078f 330 Pfam PF13353 4Fe-4S single cluster domain 29 129 3.0E-11 T 29-03-2018 CHH28_RS05390 07ea530db8222763a2aef8cf46bc078f 330 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 11 330 5.2E-99 T 29-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 CHH28_RS05390 07ea530db8222763a2aef8cf46bc078f 330 SUPERFAMILY SSF102114 10 280 2.88E-67 T 29-03-2018 CHH28_RS05390 07ea530db8222763a2aef8cf46bc078f 330 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 26 37 - T 29-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 CHH28_RS05390 07ea530db8222763a2aef8cf46bc078f 330 Pfam PF04055 Radical SAM superfamily 25 179 2.6E-24 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CHH28_RS05390 07ea530db8222763a2aef8cf46bc078f 330 Pfam PF06463 Molybdenum Cofactor Synthesis C 189 313 2.1E-35 T 29-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 CHH28_RS05115 5ec8b087abbe2c99adbc3e15f6508fe9 104 Pfam PF04380 Membrane fusogenic activity 6 73 5.9E-20 T 29-03-2018 IPR007475 Membrane fusogenic activity CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 Gene3D G3DSA:3.30.1370.10 551 620 2.6E-15 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 Gene3D G3DSA:3.30.230.70 323 550 3.1E-61 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 SUPERFAMILY SSF50249 626 697 1.17E-18 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 Pfam PF01138 3' exoribonuclease family, domain 1 330 462 1.9E-23 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 Pfam PF01138 3' exoribonuclease family, domain 1 18 147 3.5E-21 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 SUPERFAMILY SSF54211 310 498 2.99E-49 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 14 697 0.0 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 SUPERFAMILY SSF54791 561 646 2.92E-21 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 SMART SM00316 626 696 2.4E-23 T 29-03-2018 IPR022967 RNA-binding domain, S1 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 6 699 30.352 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 Gene3D G3DSA:3.30.230.70 17 255 2.3E-51 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 Gene3D G3DSA:2.40.50.140 621 700 2.5E-23 T 29-03-2018 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 Gene3D G3DSA:1.10.10.400 256 322 2.4E-17 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 SUPERFAMILY SSF55666 456 555 7.55E-30 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 Pfam PF03725 3' exoribonuclease family, domain 2 150 214 2.5E-12 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 Pfam PF03725 3' exoribonuclease family, domain 2 465 534 1.9E-6 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 Pfam PF00575 S1 RNA binding domain 625 696 2.4E-14 T 29-03-2018 IPR003029 S1 domain GO:0003676 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 SUPERFAMILY SSF55666 148 238 1.33E-27 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 SMART SM00322 558 623 2.4E-11 T 29-03-2018 IPR004087 K Homology domain GO:0003676 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 SUPERFAMILY SSF46915 231 332 2.49E-22 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 246 326 1.6E-20 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 Pfam PF00013 KH domain 562 619 1.2E-11 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 SUPERFAMILY SSF54211 9 147 8.6E-51 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS00430 01e18a7c5f68c7052440da089e469390 700 PIRSF PIRSF005499 5 700 6.3E-292 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CHH28_RS05610 84f1f1fdf46156ed02198a4fbedeadd8 102 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 99 1.7E-19 T 29-03-2018 IPR008407 Branched-chain amino acid transport, AzlD CHH28_RS00470 0deb99615d0da3c002b6b7cd9d0e3fcc 125 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 72 4.4E-27 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CHH28_RS00470 0deb99615d0da3c002b6b7cd9d0e3fcc 125 Pfam PF03840 Preprotein translocase SecG subunit 4 72 1.8E-21 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CHH28_RS00470 0deb99615d0da3c002b6b7cd9d0e3fcc 125 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 5.4E-40 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CHH28_RS00470 0deb99615d0da3c002b6b7cd9d0e3fcc 125 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 5.4E-40 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CHH28_RS00470 0deb99615d0da3c002b6b7cd9d0e3fcc 125 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 5.4E-40 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CHH28_RS00470 0deb99615d0da3c002b6b7cd9d0e3fcc 125 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 5.4E-40 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CHH28_RS11150 5e8e7466e508a9023f69756267817800 296 Hamap MF_00367 GTPase Era [era]. 3 293 36.709 T 29-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS11150 5e8e7466e508a9023f69756267817800 296 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 166 4.5E-34 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CHH28_RS11150 5e8e7466e508a9023f69756267817800 296 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 76 94 6.9E-7 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS11150 5e8e7466e508a9023f69756267817800 296 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 8 28 6.9E-7 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS11150 5e8e7466e508a9023f69756267817800 296 Pfam PF01926 50S ribosome-binding GTPase 8 122 4.3E-26 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS11150 5e8e7466e508a9023f69756267817800 296 Gene3D G3DSA:3.40.50.300 7 196 2.0E-34 T 29-03-2018 CHH28_RS11150 5e8e7466e508a9023f69756267817800 296 SUPERFAMILY SSF52540 8 217 3.55E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11150 5e8e7466e508a9023f69756267817800 296 Pfam PF07650 KH domain 206 281 8.8E-20 T 29-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS11150 5e8e7466e508a9023f69756267817800 296 Gene3D G3DSA:3.30.300.20 197 296 1.0E-41 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CHH28_RS11150 5e8e7466e508a9023f69756267817800 296 TIGRFAM TIGR00436 era: GTP-binding protein Era 6 276 1.9E-97 T 29-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS11150 5e8e7466e508a9023f69756267817800 296 SUPERFAMILY SSF54814 179 294 1.05E-40 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CHH28_RS16730 763e9b00fcfc96232d0a574dbc91bcf2 334 Gene3D G3DSA:2.40.50.100 163 294 0.022 T 29-03-2018 CHH28_RS16730 763e9b00fcfc96232d0a574dbc91bcf2 334 SUPERFAMILY SSF111369 48 199 9.68E-22 T 29-03-2018 CHH28_RS16730 763e9b00fcfc96232d0a574dbc91bcf2 334 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 27 333 9.8E-49 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CHH28_RS16730 763e9b00fcfc96232d0a574dbc91bcf2 334 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 234 2.2E-15 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CHH28_RS16730 763e9b00fcfc96232d0a574dbc91bcf2 334 Gene3D G3DSA:2.40.50.100 70 162 1.2E-14 T 29-03-2018 CHH28_RS16730 763e9b00fcfc96232d0a574dbc91bcf2 334 Gene3D G3DSA:2.40.50.100 16 69 4.4E-7 T 29-03-2018 CHH28_RS08795 65a2a8a521a1ab6ba29e90f23a7288c6 346 PRINTS PR00142 RecA protein signature 127 156 6.6E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CHH28_RS08795 65a2a8a521a1ab6ba29e90f23a7288c6 346 PRINTS PR00142 RecA protein signature 210 238 6.6E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CHH28_RS08795 65a2a8a521a1ab6ba29e90f23a7288c6 346 PRINTS PR00142 RecA protein signature 243 272 6.6E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CHH28_RS08795 65a2a8a521a1ab6ba29e90f23a7288c6 346 PRINTS PR00142 RecA protein signature 297 314 6.6E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CHH28_RS08795 65a2a8a521a1ab6ba29e90f23a7288c6 346 PRINTS PR00142 RecA protein signature 93 122 6.6E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CHH28_RS08795 65a2a8a521a1ab6ba29e90f23a7288c6 346 PRINTS PR00142 RecA protein signature 165 194 6.6E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CHH28_RS08795 65a2a8a521a1ab6ba29e90f23a7288c6 346 Gene3D G3DSA:3.30.250.10 269 326 1.5E-24 T 29-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CHH28_RS08795 65a2a8a521a1ab6ba29e90f23a7288c6 346 Gene3D G3DSA:3.40.50.300 26 268 1.6E-46 T 29-03-2018 CHH28_RS08795 65a2a8a521a1ab6ba29e90f23a7288c6 346 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 323 4.1E-167 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CHH28_RS08795 65a2a8a521a1ab6ba29e90f23a7288c6 346 SMART SM00382 57 228 1.0E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS08795 65a2a8a521a1ab6ba29e90f23a7288c6 346 SUPERFAMILY SSF54752 269 324 1.15E-20 T 29-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CHH28_RS08795 65a2a8a521a1ab6ba29e90f23a7288c6 346 ProSitePatterns PS00321 recA signature. 213 221 - T 29-03-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CHH28_RS08795 65a2a8a521a1ab6ba29e90f23a7288c6 346 SUPERFAMILY SSF52540 4 267 1.66E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS08795 65a2a8a521a1ab6ba29e90f23a7288c6 346 Pfam PF00154 recA bacterial DNA recombination protein 7 267 1.8E-139 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CHH28_RS08795 65a2a8a521a1ab6ba29e90f23a7288c6 346 Hamap MF_00268 Protein RecA [recA]. 5 329 50.069 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CHH28_RS19350 69240879563264ce07a7669b96d09aad 109 Gene3D G3DSA:2.102.10.10 1 109 6.7E-22 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CHH28_RS19350 69240879563264ce07a7669b96d09aad 109 Pfam PF00355 Rieske [2Fe-2S] domain 6 90 1.5E-14 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CHH28_RS19350 69240879563264ce07a7669b96d09aad 109 SUPERFAMILY SSF50022 6 107 1.7E-25 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CHH28_RS19010 ff22343afecb695680e142ed1dfe930d 312 Gene3D G3DSA:3.90.180.10 1 147 1.9E-43 T 29-03-2018 CHH28_RS19010 ff22343afecb695680e142ed1dfe930d 312 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 91 3.1E-11 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CHH28_RS19010 ff22343afecb695680e142ed1dfe930d 312 Pfam PF13602 Zinc-binding dehydrogenase 187 307 2.1E-23 T 29-03-2018 CHH28_RS19010 ff22343afecb695680e142ed1dfe930d 312 Gene3D G3DSA:3.40.50.720 148 257 2.2E-19 T 29-03-2018 CHH28_RS19010 ff22343afecb695680e142ed1dfe930d 312 SUPERFAMILY SSF51735 117 236 4.99E-32 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS19010 ff22343afecb695680e142ed1dfe930d 312 SMART SM00829 10 307 9.6E-22 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CHH28_RS19010 ff22343afecb695680e142ed1dfe930d 312 SUPERFAMILY SSF50129 7 150 8.98E-36 T 29-03-2018 IPR011032 GroES-like CHH28_RS19010 ff22343afecb695680e142ed1dfe930d 312 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 145 166 - T 29-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 CHH28_RS08645 ecf014bcc688de90e955fb54b2648c08 186 Gene3D G3DSA:2.60.450.10 84 186 1.3E-7 T 29-03-2018 CHH28_RS08645 ecf014bcc688de90e955fb54b2648c08 186 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 10 182 2.6E-41 T 29-03-2018 IPR010664 Lipopolysaccharide assembly, LptC-related CHH28_RS08645 ecf014bcc688de90e955fb54b2648c08 186 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 181 5.0E-42 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CHH28_RS08645 ecf014bcc688de90e955fb54b2648c08 186 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 1 184 20.605 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CHH28_RS14410 7a9e45eabbf8c9851ae7a94a44e7078e 499 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 339 497 1.1E-42 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS14410 7a9e45eabbf8c9851ae7a94a44e7078e 499 Gene3D G3DSA:3.30.70.270 326 499 2.5E-51 T 29-03-2018 CHH28_RS14410 7a9e45eabbf8c9851ae7a94a44e7078e 499 SUPERFAMILY SSF55073 346 497 1.18E-42 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS14410 7a9e45eabbf8c9851ae7a94a44e7078e 499 Pfam PF00990 Diguanylate cyclase, GGDEF domain 341 497 7.1E-44 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS14410 7a9e45eabbf8c9851ae7a94a44e7078e 499 SMART SM00267 330 499 2.9E-50 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS17835 892cbba8fbf49377d9086797a2b6c3b3 146 SUPERFAMILY SSF54637 4 141 2.89E-27 T 29-03-2018 IPR029069 HotDog domain CHH28_RS17835 892cbba8fbf49377d9086797a2b6c3b3 146 Pfam PF13279 Thioesterase-like superfamily 20 137 4.1E-13 T 29-03-2018 CHH28_RS17835 892cbba8fbf49377d9086797a2b6c3b3 146 Gene3D G3DSA:3.10.129.10 8 145 4.6E-23 T 29-03-2018 CHH28_RS00195 4e09b50d0c691b6f6116438d73380963 195 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 5.1E-57 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CHH28_RS00195 4e09b50d0c691b6f6116438d73380963 195 Gene3D G3DSA:3.40.50.1470 1 195 3.2E-72 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CHH28_RS00195 4e09b50d0c691b6f6116438d73380963 195 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 6 192 2.7E-66 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CHH28_RS00195 4e09b50d0c691b6f6116438d73380963 195 SUPERFAMILY SSF53178 5 193 9.55E-72 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CHH28_RS00195 4e09b50d0c691b6f6116438d73380963 195 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.146 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CHH28_RS00195 4e09b50d0c691b6f6116438d73380963 195 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 29-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CHH28_RS15225 d2a201eae4f25ee78072f2c99c435fe9 580 SUPERFAMILY SSF52954 469 578 2.57E-29 T 29-03-2018 IPR004154 Anticodon-binding CHH28_RS15225 d2a201eae4f25ee78072f2c99c435fe9 580 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.5E-18 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CHH28_RS15225 d2a201eae4f25ee78072f2c99c435fe9 580 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.5E-18 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CHH28_RS15225 d2a201eae4f25ee78072f2c99c435fe9 580 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.5E-18 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CHH28_RS15225 d2a201eae4f25ee78072f2c99c435fe9 580 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.5E-18 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CHH28_RS15225 d2a201eae4f25ee78072f2c99c435fe9 580 Gene3D G3DSA:3.30.930.10 11 466 8.1E-100 T 29-03-2018 CHH28_RS15225 d2a201eae4f25ee78072f2c99c435fe9 580 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 579 41.132 T 29-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CHH28_RS15225 d2a201eae4f25ee78072f2c99c435fe9 580 SUPERFAMILY SSF55826 218 396 1.57E-25 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CHH28_RS15225 d2a201eae4f25ee78072f2c99c435fe9 580 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 465 5.2E-52 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS15225 d2a201eae4f25ee78072f2c99c435fe9 580 Pfam PF04073 Aminoacyl-tRNA editing domain 259 381 1.1E-19 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CHH28_RS15225 d2a201eae4f25ee78072f2c99c435fe9 580 PIRSF PIRSF001535 1 580 9.2E-260 T 29-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CHH28_RS15225 d2a201eae4f25ee78072f2c99c435fe9 580 Pfam PF03129 Anticodon binding domain 481 576 1.5E-15 T 29-03-2018 IPR004154 Anticodon-binding CHH28_RS15225 d2a201eae4f25ee78072f2c99c435fe9 580 Gene3D G3DSA:3.40.50.800 467 579 1.4E-31 T 29-03-2018 IPR004154 Anticodon-binding CHH28_RS15225 d2a201eae4f25ee78072f2c99c435fe9 580 SUPERFAMILY SSF55681 413 484 1.55E-106 T 29-03-2018 CHH28_RS15225 d2a201eae4f25ee78072f2c99c435fe9 580 SUPERFAMILY SSF55681 10 237 1.55E-106 T 29-03-2018 CHH28_RS15225 d2a201eae4f25ee78072f2c99c435fe9 580 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 574 2.2E-235 T 29-03-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CHH28_RS18245 b9f192c660d7f62cec5939e76a265e2e 574 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 404 414 - T 29-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site CHH28_RS18245 b9f192c660d7f62cec5939e76a265e2e 574 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 225 235 - T 29-03-2018 IPR022398 Peptidase S8, subtilisin, His-active site CHH28_RS18245 b9f192c660d7f62cec5939e76a265e2e 574 SUPERFAMILY SSF52743 119 193 1.96E-73 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS18245 b9f192c660d7f62cec5939e76a265e2e 574 SUPERFAMILY SSF52743 225 463 1.96E-73 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS18245 b9f192c660d7f62cec5939e76a265e2e 574 Gene3D G3DSA:3.40.50.200 90 468 1.6E-84 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS18245 b9f192c660d7f62cec5939e76a265e2e 574 Pfam PF00082 Subtilase family 149 442 1.1E-45 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS18245 b9f192c660d7f62cec5939e76a265e2e 574 PRINTS PR00723 Subtilisin serine protease family (S8) signature 221 234 2.3E-17 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CHH28_RS18245 b9f192c660d7f62cec5939e76a265e2e 574 PRINTS PR00723 Subtilisin serine protease family (S8) signature 403 419 2.3E-17 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CHH28_RS18245 b9f192c660d7f62cec5939e76a265e2e 574 PRINTS PR00723 Subtilisin serine protease family (S8) signature 149 168 2.3E-17 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CHH28_RS18830 b43a6151f99f87fd65e22ffd45e6a8e6 340 Pfam PF01706 FliG C-terminal domain 225 332 1.8E-41 T 29-03-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal CHH28_RS18830 b43a6151f99f87fd65e22ffd45e6a8e6 340 SUPERFAMILY SSF48029 14 123 4.71E-22 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CHH28_RS18830 b43a6151f99f87fd65e22ffd45e6a8e6 340 PIRSF PIRSF003161 8 340 3.1E-114 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CHH28_RS18830 b43a6151f99f87fd65e22ffd45e6a8e6 340 Pfam PF14842 FliG N-terminal domain 13 113 8.1E-32 T 29-03-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CHH28_RS18830 b43a6151f99f87fd65e22ffd45e6a8e6 340 Pfam PF14841 FliG middle domain 124 194 9.8E-26 T 29-03-2018 IPR032779 Flagellar motor switch protein FliG, middle domain CHH28_RS18830 b43a6151f99f87fd65e22ffd45e6a8e6 340 SUPERFAMILY SSF48029 123 333 3.92E-68 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CHH28_RS18830 b43a6151f99f87fd65e22ffd45e6a8e6 340 Gene3D G3DSA:1.10.220.30 203 340 1.3E-34 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CHH28_RS18830 b43a6151f99f87fd65e22ffd45e6a8e6 340 Gene3D G3DSA:1.10.220.30 81 200 1.7E-20 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CHH28_RS18830 b43a6151f99f87fd65e22ffd45e6a8e6 340 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 10 337 8.8E-99 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CHH28_RS18830 b43a6151f99f87fd65e22ffd45e6a8e6 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 234 254 1.5E-61 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CHH28_RS18830 b43a6151f99f87fd65e22ffd45e6a8e6 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 13 29 1.5E-61 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CHH28_RS18830 b43a6151f99f87fd65e22ffd45e6a8e6 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 280 306 1.5E-61 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CHH28_RS18830 b43a6151f99f87fd65e22ffd45e6a8e6 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 203 228 1.5E-61 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CHH28_RS18830 b43a6151f99f87fd65e22ffd45e6a8e6 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 42 68 1.5E-61 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CHH28_RS18830 b43a6151f99f87fd65e22ffd45e6a8e6 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 122 145 1.5E-61 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CHH28_RS18830 b43a6151f99f87fd65e22ffd45e6a8e6 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 256 276 1.5E-61 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CHH28_RS18830 b43a6151f99f87fd65e22ffd45e6a8e6 340 Gene3D G3DSA:1.10.220.30 1 75 2.1E-9 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CHH28_RS06405 529c8c3cf8d5a500630a38d102c2950c 343 Gene3D G3DSA:1.20.1600.10 42 253 1.1E-16 T 29-03-2018 CHH28_RS06405 529c8c3cf8d5a500630a38d102c2950c 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 29 341 2.5E-56 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CHH28_RS06405 529c8c3cf8d5a500630a38d102c2950c 343 SUPERFAMILY SSF111369 59 205 1.44E-13 T 29-03-2018 CHH28_RS06405 529c8c3cf8d5a500630a38d102c2950c 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 253 6.2E-16 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CHH28_RS12565 5065906fe89ccc30ddb2f170c78e2d94 342 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 342 178.434 T 29-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CHH28_RS12565 5065906fe89ccc30ddb2f170c78e2d94 342 SMART SM00382 54 181 4.5E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS12565 5065906fe89ccc30ddb2f170c78e2d94 342 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 336 9.0E-30 T 29-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CHH28_RS12565 5065906fe89ccc30ddb2f170c78e2d94 342 SUPERFAMILY SSF52540 23 255 2.8E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS12565 5065906fe89ccc30ddb2f170c78e2d94 342 Gene3D G3DSA:3.40.50.300 21 184 3.7E-27 T 29-03-2018 CHH28_RS12565 5065906fe89ccc30ddb2f170c78e2d94 342 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 3.8E-117 T 29-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CHH28_RS12565 5065906fe89ccc30ddb2f170c78e2d94 342 Gene3D G3DSA:1.10.10.10 260 330 2.4E-32 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS12565 5065906fe89ccc30ddb2f170c78e2d94 342 SUPERFAMILY SSF46785 260 333 8.17E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS12565 5065906fe89ccc30ddb2f170c78e2d94 342 Gene3D G3DSA:1.10.8.60 187 257 1.3E-32 T 29-03-2018 CHH28_RS12565 5065906fe89ccc30ddb2f170c78e2d94 342 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 3.6E-32 T 29-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CHH28_RS12565 5065906fe89ccc30ddb2f170c78e2d94 342 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 1.3E-146 T 29-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CHH28_RS12305 d89f669a9461169ca22871cf73d85492 484 Pfam PF00171 Aldehyde dehydrogenase family 15 473 4.9E-173 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS12305 d89f669a9461169ca22871cf73d85492 484 Gene3D G3DSA:3.40.605.10 1 260 1.6E-100 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS12305 d89f669a9461169ca22871cf73d85492 484 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CHH28_RS12305 d89f669a9461169ca22871cf73d85492 484 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CHH28_RS12305 d89f669a9461169ca22871cf73d85492 484 SUPERFAMILY SSF53720 3 479 1.31E-167 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CHH28_RS12305 d89f669a9461169ca22871cf73d85492 484 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 6 471 1.5E-209 T 29-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CHH28_RS12305 d89f669a9461169ca22871cf73d85492 484 Gene3D G3DSA:3.40.309.10 261 459 2.0E-71 T 29-03-2018 CHH28_RS09220 ab358b2b8ef82e78ee5a00a83c779811 185 SUPERFAMILY SSF52317 3 183 3.75E-46 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS09220 ab358b2b8ef82e78ee5a00a83c779811 185 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 180 2.2E-60 T 29-03-2018 IPR006287 Protein DJ-1 CHH28_RS09220 ab358b2b8ef82e78ee5a00a83c779811 185 Gene3D G3DSA:3.40.50.880 2 184 2.5E-42 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS09220 ab358b2b8ef82e78ee5a00a83c779811 185 Pfam PF01965 DJ-1/PfpI family 3 167 7.4E-42 T 29-03-2018 IPR002818 DJ-1/PfpI CHH28_RS08365 b44aaee510b8b9f653f1450f8e577ed0 112 Gene3D G3DSA:1.20.120.30 24 102 1.7E-4 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CHH28_RS08365 b44aaee510b8b9f653f1450f8e577ed0 112 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 62 3.0E-10 T 29-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CHH28_RS17730 be57e91c4d9701fe9d1c182c28155eca 221 Gene3D G3DSA:2.40.50.110 13 85 3.7E-7 T 29-03-2018 CHH28_RS17730 be57e91c4d9701fe9d1c182c28155eca 221 Gene3D G3DSA:1.20.5.10 166 188 0.0044 T 29-03-2018 CHH28_RS17730 be57e91c4d9701fe9d1c182c28155eca 221 Gene3D G3DSA:1.20.5.400 86 151 3.2E-4 T 29-03-2018 CHH28_RS17730 be57e91c4d9701fe9d1c182c28155eca 221 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 24 220 1.6E-56 T 29-03-2018 IPR016476 SH3 domain protein CHH28_RS17730 be57e91c4d9701fe9d1c182c28155eca 221 SMART SM00287 20 85 8.6E-5 T 29-03-2018 IPR003646 SH3-like domain, bacterial-type CHH28_RS17730 be57e91c4d9701fe9d1c182c28155eca 221 Pfam PF08239 Bacterial SH3 domain 32 82 2.1E-7 T 29-03-2018 IPR003646 SH3-like domain, bacterial-type CHH28_RS06645 454423914021785cccfa91428f7e2352 245 Gene3D G3DSA:3.30.1330.30 1 76 2.8E-16 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like CHH28_RS06645 454423914021785cccfa91428f7e2352 245 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 1.3E-81 T 29-03-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 CHH28_RS06645 454423914021785cccfa91428f7e2352 245 Pfam PF00588 SpoU rRNA Methylase family 97 237 5.2E-38 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CHH28_RS06645 454423914021785cccfa91428f7e2352 245 SUPERFAMILY SSF55315 4 73 2.59E-15 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like CHH28_RS06645 454423914021785cccfa91428f7e2352 245 SUPERFAMILY SSF75217 93 244 4.77E-46 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CHH28_RS06645 454423914021785cccfa91428f7e2352 245 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 77 4.9E-16 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CHH28_RS06645 454423914021785cccfa91428f7e2352 245 SMART SM00967 5 80 5.5E-12 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CHH28_RS06645 454423914021785cccfa91428f7e2352 245 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 42.345 T 29-03-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CHH28_RS06645 454423914021785cccfa91428f7e2352 245 Gene3D G3DSA:3.40.1280.10 79 244 1.7E-44 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CHH28_RS11625 54541fec7d467683e7d8a9b41d885ad5 455 PIRSF PIRSF037714 1 455 3.2E-148 T 29-03-2018 IPR017270 Putative MotA/TolQ/ExbB family protein CHH28_RS11625 54541fec7d467683e7d8a9b41d885ad5 455 Gene3D G3DSA:1.20.1170.10 15 337 1.0E-4 T 29-03-2018 CHH28_RS11625 54541fec7d467683e7d8a9b41d885ad5 455 Pfam PF01618 MotA/TolQ/ExbB proton channel family 327 437 3.5E-27 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CHH28_RS09545 e7af27068f4b270ca1adbb9e6bf4bc77 279 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 12 273 48.691 T 29-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CHH28_RS09545 e7af27068f4b270ca1adbb9e6bf4bc77 279 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 17 271 5.1E-115 T 29-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CHH28_RS09545 e7af27068f4b270ca1adbb9e6bf4bc77 279 Gene3D G3DSA:3.20.20.70 15 278 6.2E-70 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS09545 e7af27068f4b270ca1adbb9e6bf4bc77 279 Pfam PF00793 DAHP synthetase I family 14 271 1.6E-66 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CHH28_RS09545 e7af27068f4b270ca1adbb9e6bf4bc77 279 SUPERFAMILY SSF51569 5 274 3.11E-100 T 29-03-2018 CHH28_RS09755 ffb28bb00c9198f62ec26e4069d85b27 291 Pfam PF01478 Type IV leader peptidase family 140 249 2.7E-25 T 29-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CHH28_RS09755 ffb28bb00c9198f62ec26e4069d85b27 291 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 20 130 1.7E-30 T 29-03-2018 IPR010627 Peptidase A24A, N-terminal CHH28_RS09755 ffb28bb00c9198f62ec26e4069d85b27 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 206 216 2.8E-24 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CHH28_RS09755 ffb28bb00c9198f62ec26e4069d85b27 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 229 244 2.8E-24 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CHH28_RS09755 ffb28bb00c9198f62ec26e4069d85b27 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 217 228 2.8E-24 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CHH28_RS09755 ffb28bb00c9198f62ec26e4069d85b27 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 149 166 2.8E-24 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CHH28_RS05155 e5fa6b431ba3a6a42dcae0b0cb94ccc2 111 Gene3D G3DSA:3.30.429.10 1 111 4.4E-25 T 29-03-2018 CHH28_RS05155 e5fa6b431ba3a6a42dcae0b0cb94ccc2 111 SUPERFAMILY SSF55331 2 110 3.05E-22 T 29-03-2018 IPR014347 Tautomerase/MIF superfamily CHH28_RS17685 685311fe9f3877597d7509459aa69348 250 Pfam PF00106 short chain dehydrogenase 11 207 1.7E-44 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17685 685311fe9f3877597d7509459aa69348 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CHH28_RS17685 685311fe9f3877597d7509459aa69348 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 7.8E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17685 685311fe9f3877597d7509459aa69348 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 7.8E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17685 685311fe9f3877597d7509459aa69348 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 7.8E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17685 685311fe9f3877597d7509459aa69348 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 7.8E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17685 685311fe9f3877597d7509459aa69348 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 7.8E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17685 685311fe9f3877597d7509459aa69348 250 Gene3D G3DSA:3.40.50.720 1 193 5.2E-52 T 29-03-2018 CHH28_RS17685 685311fe9f3877597d7509459aa69348 250 Gene3D G3DSA:3.40.50.720 194 247 2.5E-4 T 29-03-2018 CHH28_RS17685 685311fe9f3877597d7509459aa69348 250 SUPERFAMILY SSF51735 4 240 2.01E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS05595 f17a85a195daf6e737d9783b58cc03f0 402 Gene3D G3DSA:3.40.50.410 212 354 2.1E-8 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS05595 f17a85a195daf6e737d9783b58cc03f0 402 Pfam PF01882 Protein of unknown function DUF58 201 281 3.1E-17 T 29-03-2018 IPR002881 Domain of unknown function DUF58 CHH28_RS19210 45516413607a5ac2be56b14ff6b5f72e 264 Gene3D G3DSA:1.10.3210.10 71 233 7.2E-7 T 29-03-2018 CHH28_RS19210 45516413607a5ac2be56b14ff6b5f72e 264 Pfam PF01966 HD domain 86 173 4.9E-5 T 29-03-2018 IPR006674 HD domain CHH28_RS19210 45516413607a5ac2be56b14ff6b5f72e 264 SUPERFAMILY SSF109604 70 167 3.43E-8 T 29-03-2018 CHH28_RS08130 35affc6c472c60025337133dc8010625 1219 Pfam PF01968 Hydantoinase/oxoprolinase 213 499 1.8E-107 T 29-03-2018 IPR002821 Hydantoinase/oxoprolinase GO:0016787 Reactome: R-HSA-174403 CHH28_RS08130 35affc6c472c60025337133dc8010625 1219 Pfam PF02538 Hydantoinase B/oxoprolinase 709 1219 9.7E-191 T 29-03-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403 CHH28_RS08130 35affc6c472c60025337133dc8010625 1219 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 17 194 4.6E-52 T 29-03-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403 CHH28_RS08130 35affc6c472c60025337133dc8010625 1219 Gene3D G3DSA:3.30.420.40 20 313 3.8E-4 T 29-03-2018 CHH28_RS19230 7cf0a7162322566a08387717120ea791 576 SUPERFAMILY SSF51905 332 489 3.33E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS19230 7cf0a7162322566a08387717120ea791 576 SUPERFAMILY SSF51905 152 242 3.33E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS19230 7cf0a7162322566a08387717120ea791 576 Pfam PF04273 Putative phosphatase (DUF442) 2 109 9.8E-33 T 29-03-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 CHH28_RS19230 7cf0a7162322566a08387717120ea791 576 Gene3D G3DSA:3.90.190.10 1 143 1.1E-8 T 29-03-2018 IPR029021 Protein-tyrosine phosphatase-like CHH28_RS19230 7cf0a7162322566a08387717120ea791 576 Gene3D G3DSA:3.50.50.60 274 408 2.4E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS19230 7cf0a7162322566a08387717120ea791 576 Gene3D G3DSA:3.50.50.60 153 273 1.8E-9 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS19230 7cf0a7162322566a08387717120ea791 576 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 2 135 1.8E-38 T 29-03-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 CHH28_RS19230 7cf0a7162322566a08387717120ea791 576 SUPERFAMILY SSF51905 152 293 1.06E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS16955 0cb82b4938a992cc11616c4fee26d875 323 SUPERFAMILY SSF161111 43 243 3.27E-48 T 29-03-2018 CHH28_RS16955 0cb82b4938a992cc11616c4fee26d875 323 Pfam PF16916 Dimerisation domain of Zinc Transporter 247 322 2.6E-23 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CHH28_RS16955 0cb82b4938a992cc11616c4fee26d875 323 SUPERFAMILY SSF160240 246 323 1.44E-20 T 29-03-2018 CHH28_RS16955 0cb82b4938a992cc11616c4fee26d875 323 Gene3D G3DSA:3.30.70.1350 242 323 5.7E-21 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CHH28_RS16955 0cb82b4938a992cc11616c4fee26d875 323 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 46 322 5.4E-66 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CHH28_RS16955 0cb82b4938a992cc11616c4fee26d875 323 Gene3D G3DSA:1.20.1510.10 44 241 4.4E-34 T 29-03-2018 CHH28_RS16955 0cb82b4938a992cc11616c4fee26d875 323 Pfam PF01545 Cation efflux family 51 242 1.1E-35 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CHH28_RS01110 212ae2a53caad7ade7e5ba49fa62b0d4 454 Pfam PF01979 Amidohydrolase family 57 422 1.7E-63 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CHH28_RS01110 212ae2a53caad7ade7e5ba49fa62b0d4 454 SUPERFAMILY SSF51338 351 450 2.09E-28 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS01110 212ae2a53caad7ade7e5ba49fa62b0d4 454 Gene3D G3DSA:2.30.40.10 1 69 1.3E-11 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS01110 212ae2a53caad7ade7e5ba49fa62b0d4 454 SUPERFAMILY SSF51338 3 74 5.11E-7 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS01110 212ae2a53caad7ade7e5ba49fa62b0d4 454 SUPERFAMILY SSF51556 60 374 1.22E-94 T 29-03-2018 IPR032466 Metal-dependent hydrolase CHH28_RS01110 212ae2a53caad7ade7e5ba49fa62b0d4 454 Gene3D G3DSA:3.20.20.140 70 374 3.1E-59 T 29-03-2018 CHH28_RS17800 994359e44fa7641b2a26878760825b0a 311 Gene3D G3DSA:3.40.1090.10 2 290 2.0E-38 T 29-03-2018 CHH28_RS17800 994359e44fa7641b2a26878760825b0a 311 SUPERFAMILY SSF52151 4 296 1.02E-50 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CHH28_RS17800 994359e44fa7641b2a26878760825b0a 311 Pfam PF01734 Patatin-like phospholipase 9 171 6.2E-16 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CHH28_RS03965 b6c52535be508a82cbdd58412074a9fc 464 SMART SM00382 139 331 1.5E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS03965 b6c52535be508a82cbdd58412074a9fc 464 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CHH28_RS03965 b6c52535be508a82cbdd58412074a9fc 464 Gene3D G3DSA:3.40.50.300 73 351 1.0E-88 T 29-03-2018 CHH28_RS03965 b6c52535be508a82cbdd58412074a9fc 464 SUPERFAMILY SSF50615 2 72 1.99E-25 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CHH28_RS03965 b6c52535be508a82cbdd58412074a9fc 464 Gene3D G3DSA:1.10.1140.10 352 462 2.8E-42 T 29-03-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CHH28_RS03965 b6c52535be508a82cbdd58412074a9fc 464 SUPERFAMILY SSF52540 74 352 1.15E-86 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS03965 b6c52535be508a82cbdd58412074a9fc 464 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 55.327 T 29-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CHH28_RS03965 b6c52535be508a82cbdd58412074a9fc 464 SUPERFAMILY SSF47917 349 463 5.23E-53 T 29-03-2018 CHH28_RS03965 b6c52535be508a82cbdd58412074a9fc 464 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 5 70 7.8E-21 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CHH28_RS03965 b6c52535be508a82cbdd58412074a9fc 464 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 127 346 1.5E-62 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CHH28_RS03965 b6c52535be508a82cbdd58412074a9fc 464 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 2 464 5.3E-251 T 29-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CHH28_RS03965 b6c52535be508a82cbdd58412074a9fc 464 Gene3D G3DSA:2.40.10.170 1 72 5.5E-29 T 29-03-2018 CHH28_RS05475 f22b1a19c9949ca96573773bec5cf046 164 SUPERFAMILY SSF53271 6 145 3.02E-33 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CHH28_RS05475 f22b1a19c9949ca96573773bec5cf046 164 Gene3D G3DSA:3.40.50.2020 1 156 2.7E-23 T 29-03-2018 CHH28_RS05475 f22b1a19c9949ca96573773bec5cf046 164 Pfam PF00156 Phosphoribosyl transferase domain 17 135 5.0E-17 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CHH28_RS00210 eee3dd9dc0624f51d38f759086c4d850 187 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 56 186 1.4E-8 T 29-03-2018 IPR032551 HTH-type transcriptional repressor, C-terminal CHH28_RS00210 eee3dd9dc0624f51d38f759086c4d850 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 1.8E-15 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS00210 eee3dd9dc0624f51d38f759086c4d850 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.3E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS00210 eee3dd9dc0624f51d38f759086c4d850 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.3E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS00210 eee3dd9dc0624f51d38f759086c4d850 187 Gene3D G3DSA:1.10.10.60 2 54 3.9E-18 T 29-03-2018 CHH28_RS00210 eee3dd9dc0624f51d38f759086c4d850 187 Gene3D G3DSA:1.10.357.10 55 187 3.8E-11 T 29-03-2018 CHH28_RS00210 eee3dd9dc0624f51d38f759086c4d850 187 SUPERFAMILY SSF46689 3 69 1.34E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS16735 dac3a7a2c50a872ed6279ca7901fa5d9 318 Pfam PF12833 Helix-turn-helix domain 224 299 1.6E-15 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS16735 dac3a7a2c50a872ed6279ca7901fa5d9 318 SUPERFAMILY SSF46689 253 301 1.03E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS16735 dac3a7a2c50a872ed6279ca7901fa5d9 318 Gene3D G3DSA:1.10.10.10 9 264 1.7E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS16735 dac3a7a2c50a872ed6279ca7901fa5d9 318 SMART SM00342 218 300 8.2E-16 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS16735 dac3a7a2c50a872ed6279ca7901fa5d9 318 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 254 296 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CHH28_RS16735 dac3a7a2c50a872ed6279ca7901fa5d9 318 Gene3D G3DSA:1.10.10.60 265 303 2.0E-11 T 29-03-2018 CHH28_RS10620 dd7b988bed04eb2b724f3a27178e0a4f 131 SMART SM00450 30 127 4.0E-11 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS10620 dd7b988bed04eb2b724f3a27178e0a4f 131 Gene3D G3DSA:3.40.250.10 11 130 8.8E-21 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS10620 dd7b988bed04eb2b724f3a27178e0a4f 131 Pfam PF00581 Rhodanese-like domain 36 122 2.8E-11 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS10620 dd7b988bed04eb2b724f3a27178e0a4f 131 SUPERFAMILY SSF52821 17 129 6.94E-22 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS06640 7cc76b3a600ddeec9792c496c61da264 840 SUPERFAMILY SSF50249 144 242 2.17E-17 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS06640 7cc76b3a600ddeec9792c496c61da264 840 ProSitePatterns PS01175 Ribonuclease II family signature. 567 591 - T 29-03-2018 IPR022966 Ribonuclease II/R, conserved site CHH28_RS06640 7cc76b3a600ddeec9792c496c61da264 840 Hamap MF_01895 Ribonuclease R [rnr]. 45 745 56.519 T 29-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CHH28_RS06640 7cc76b3a600ddeec9792c496c61da264 840 SUPERFAMILY SSF50249 226 662 4.8E-145 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS06640 7cc76b3a600ddeec9792c496c61da264 840 Pfam PF08206 Ribonuclease B OB domain 94 150 3.8E-20 T 29-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain CHH28_RS06640 7cc76b3a600ddeec9792c496c61da264 840 Pfam PF00575 S1 RNA binding domain 663 743 6.3E-11 T 29-03-2018 IPR003029 S1 domain GO:0003676 CHH28_RS06640 7cc76b3a600ddeec9792c496c61da264 840 SUPERFAMILY SSF50249 74 153 1.01E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS06640 7cc76b3a600ddeec9792c496c61da264 840 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 86 744 8.2E-235 T 29-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CHH28_RS06640 7cc76b3a600ddeec9792c496c61da264 840 SMART SM00357 158 220 3.6 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CHH28_RS06640 7cc76b3a600ddeec9792c496c61da264 840 SMART SM00357 93 151 4.2E-10 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CHH28_RS06640 7cc76b3a600ddeec9792c496c61da264 840 Gene3D G3DSA:2.40.50.140 661 746 4.2E-19 T 29-03-2018 CHH28_RS06640 7cc76b3a600ddeec9792c496c61da264 840 Pfam PF00773 RNB domain 266 599 3.4E-110 T 29-03-2018 CHH28_RS06640 7cc76b3a600ddeec9792c496c61da264 840 SMART SM00955 266 600 1.4E-183 T 29-03-2018 CHH28_RS06640 7cc76b3a600ddeec9792c496c61da264 840 SMART SM00316 662 745 2.9E-12 T 29-03-2018 IPR022967 RNA-binding domain, S1 CHH28_RS06640 7cc76b3a600ddeec9792c496c61da264 840 SMART SM00316 87 148 2.7 T 29-03-2018 IPR022967 RNA-binding domain, S1 CHH28_RS06640 7cc76b3a600ddeec9792c496c61da264 840 SUPERFAMILY SSF50249 664 744 1.88E-21 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS06640 7cc76b3a600ddeec9792c496c61da264 840 TIGRFAM TIGR02063 RNase_R: ribonuclease R 27 745 8.1E-267 T 29-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CHH28_RS06640 7cc76b3a600ddeec9792c496c61da264 840 Pfam PF08461 Ribonuclease R winged-helix domain 30 78 5.5E-5 T 29-03-2018 IPR013668 Ribonuclease R winged-helix domain CHH28_RS19040 0ce12ebdc25d8d97947fb671440c5fa6 190 Pfam PF01694 Rhomboid family 43 178 1.6E-18 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CHH28_RS19040 0ce12ebdc25d8d97947fb671440c5fa6 190 SUPERFAMILY SSF144091 10 180 1.96E-25 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CHH28_RS19040 0ce12ebdc25d8d97947fb671440c5fa6 190 Gene3D G3DSA:1.20.1540.10 6 180 1.1E-18 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CHH28_RS11110 3de6bfbfafeab4f10a5cd39046e9c8a3 195 SUPERFAMILY SSF88946 5 110 3.77E-30 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS11110 3de6bfbfafeab4f10a5cd39046e9c8a3 195 Gene3D G3DSA:1.10.1740.10 2 96 8.2E-27 T 29-03-2018 CHH28_RS11110 3de6bfbfafeab4f10a5cd39046e9c8a3 195 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 48 79 - T 29-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS11110 3de6bfbfafeab4f10a5cd39046e9c8a3 195 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 4 191 2.5E-95 T 29-03-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS11110 3de6bfbfafeab4f10a5cd39046e9c8a3 195 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 187 1.1E-31 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS11110 3de6bfbfafeab4f10a5cd39046e9c8a3 195 SUPERFAMILY SSF88659 125 187 3.36E-17 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS11110 3de6bfbfafeab4f10a5cd39046e9c8a3 195 Gene3D G3DSA:1.10.10.10 97 190 6.2E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS11110 3de6bfbfafeab4f10a5cd39046e9c8a3 195 Pfam PF08281 Sigma-70, region 4 135 182 1.5E-17 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS11110 3de6bfbfafeab4f10a5cd39046e9c8a3 195 Pfam PF04542 Sigma-70 region 2 26 93 2.1E-17 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS06725 fd0a6af1c83f8b7a086bc45ae4b3fb6a 167 Gene3D G3DSA:2.40.440.10 30 166 9.6E-22 T 29-03-2018 CHH28_RS06725 fd0a6af1c83f8b7a086bc45ae4b3fb6a 167 Pfam PF03734 L,D-transpeptidase catalytic domain 31 165 7.7E-18 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CHH28_RS06725 fd0a6af1c83f8b7a086bc45ae4b3fb6a 167 SUPERFAMILY SSF141523 31 165 1.19E-23 T 29-03-2018 CHH28_RS05710 facae8834d38227ba5f397d0cbf868a5 421 Gene3D G3DSA:3.30.565.10 287 416 2.4E-12 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS05710 facae8834d38227ba5f397d0cbf868a5 421 SUPERFAMILY SSF47384 208 290 1.61E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS05710 facae8834d38227ba5f397d0cbf868a5 421 SMART SM00388 224 290 5.6E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS05710 facae8834d38227ba5f397d0cbf868a5 421 SUPERFAMILY SSF55874 291 413 1.72E-12 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS05710 facae8834d38227ba5f397d0cbf868a5 421 Gene3D G3DSA:1.10.287.130 215 286 4.2E-9 T 29-03-2018 CHH28_RS05710 facae8834d38227ba5f397d0cbf868a5 421 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 289 1.2E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS14075 d6b299177b2ad68e97243be7ec92ab2e 362 TIGRFAM TIGR02913 HAF_rpt: probable extracellular repeat, HAF family 41 88 8.6E-8 T 29-03-2018 IPR014262 Extracellular HAF CHH28_RS14075 d6b299177b2ad68e97243be7ec92ab2e 362 Pfam PF11949 Protein of unknown function (DUF3466) 39 164 1.1E-6 T 29-03-2018 IPR022562 Protein of unknown function DUF3466 CHH28_RS01315 db2b47e60eed7177e3297cc55cbae3dc 272 SUPERFAMILY SSF158682 21 219 2.2E-29 T 29-03-2018 CHH28_RS01315 db2b47e60eed7177e3297cc55cbae3dc 272 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 271 34.518 T 29-03-2018 IPR023749 Co-chaperone DjlA GO:0051087 CHH28_RS01315 db2b47e60eed7177e3297cc55cbae3dc 272 PRINTS PR00625 DnaJ domain signature 208 226 3.2E-8 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS01315 db2b47e60eed7177e3297cc55cbae3dc 272 PRINTS PR00625 DnaJ domain signature 226 241 3.2E-8 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS01315 db2b47e60eed7177e3297cc55cbae3dc 272 PRINTS PR00625 DnaJ domain signature 250 270 3.2E-8 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS01315 db2b47e60eed7177e3297cc55cbae3dc 272 SMART SM00271 205 270 4.1E-14 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS01315 db2b47e60eed7177e3297cc55cbae3dc 272 Pfam PF00226 DnaJ domain 207 265 4.7E-11 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS01315 db2b47e60eed7177e3297cc55cbae3dc 272 Gene3D G3DSA:1.10.287.110 183 267 6.1E-15 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS01315 db2b47e60eed7177e3297cc55cbae3dc 272 Pfam PF05099 Tellurite resistance protein TerB 50 178 6.3E-20 T 29-03-2018 IPR007791 Co-chaperone DjlA, N-terminal CHH28_RS01315 db2b47e60eed7177e3297cc55cbae3dc 272 Gene3D G3DSA:1.10.3680.10 53 182 4.6E-27 T 29-03-2018 IPR029024 TerB-like CHH28_RS01315 db2b47e60eed7177e3297cc55cbae3dc 272 SUPERFAMILY SSF46565 205 265 1.79E-15 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS14480 e5479f64983ad84ee1448f79bfae387f 510 Pfam PF00437 Type II/IV secretion system protein 138 403 2.4E-91 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CHH28_RS14480 e5479f64983ad84ee1448f79bfae387f 510 SUPERFAMILY SSF52540 121 507 7.6E-104 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS14480 e5479f64983ad84ee1448f79bfae387f 510 Gene3D G3DSA:3.40.50.300 237 510 1.5E-62 T 29-03-2018 CHH28_RS14480 e5479f64983ad84ee1448f79bfae387f 510 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 26 507 4.4E-217 T 29-03-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 CHH28_RS14480 e5479f64983ad84ee1448f79bfae387f 510 SUPERFAMILY SSF160246 27 90 6.8E-17 T 29-03-2018 CHH28_RS14480 e5479f64983ad84ee1448f79bfae387f 510 SMART SM00382 264 387 3.1E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS14480 e5479f64983ad84ee1448f79bfae387f 510 Gene3D G3DSA:3.30.450.90 101 236 3.2E-49 T 29-03-2018 CHH28_RS14480 e5479f64983ad84ee1448f79bfae387f 510 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 331 345 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CHH28_RS09255 9ec4cc402bdb86255427ab99589b4596 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.6E-24 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS09255 9ec4cc402bdb86255427ab99589b4596 289 SUPERFAMILY SSF46785 1 110 3.38E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS09255 9ec4cc402bdb86255427ab99589b4596 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.3E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS09255 9ec4cc402bdb86255427ab99589b4596 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.3E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS09255 9ec4cc402bdb86255427ab99589b4596 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.3E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS09255 9ec4cc402bdb86255427ab99589b4596 289 Gene3D G3DSA:1.10.10.10 1 83 3.2E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS09255 9ec4cc402bdb86255427ab99589b4596 289 Gene3D G3DSA:3.40.190.10 87 175 2.3E-24 T 29-03-2018 CHH28_RS09255 9ec4cc402bdb86255427ab99589b4596 289 Gene3D G3DSA:3.40.190.10 176 262 1.9E-15 T 29-03-2018 CHH28_RS09255 9ec4cc402bdb86255427ab99589b4596 289 SUPERFAMILY SSF53850 90 287 1.81E-42 T 29-03-2018 CHH28_RS09255 9ec4cc402bdb86255427ab99589b4596 289 Pfam PF03466 LysR substrate binding domain 88 286 2.4E-46 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS16445 03d888a56b43326222d13a08a2334e5a 268 Gene3D G3DSA:3.10.50.40 44 246 0.0013 T 29-03-2018 CHH28_RS16445 03d888a56b43326222d13a08a2334e5a 268 SUPERFAMILY SSF109998 33 153 5.1E-5 T 29-03-2018 IPR027304 Trigger factor/SurA domain CHH28_RS00135 6e1516e1b6c7ce83a19cc97c00963f6f 161 Pfam PF00588 SpoU rRNA Methylase family 2 142 1.9E-31 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CHH28_RS00135 6e1516e1b6c7ce83a19cc97c00963f6f 161 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 33.171 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CHH28_RS00135 6e1516e1b6c7ce83a19cc97c00963f6f 161 SUPERFAMILY SSF75217 1 152 1.5E-42 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CHH28_RS00135 6e1516e1b6c7ce83a19cc97c00963f6f 161 PIRSF PIRSF029256 1 154 1.5E-66 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CHH28_RS00135 6e1516e1b6c7ce83a19cc97c00963f6f 161 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 2.0E-62 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CHH28_RS00135 6e1516e1b6c7ce83a19cc97c00963f6f 161 Gene3D G3DSA:3.40.1280.10 1 156 4.3E-35 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CHH28_RS09640 8184a750e6d629ce0a7cf8bc421cd9c9 273 SUPERFAMILY SSF48452 20 117 1.59E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS09640 8184a750e6d629ce0a7cf8bc421cd9c9 273 Pfam PF13525 Outer membrane lipoprotein 26 231 4.2E-64 T 29-03-2018 CHH28_RS09640 8184a750e6d629ce0a7cf8bc421cd9c9 273 Gene3D G3DSA:1.25.20.10 24 261 2.0E-14 T 29-03-2018 CHH28_RS09640 8184a750e6d629ce0a7cf8bc421cd9c9 273 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 4 243 1.4E-76 T 29-03-2018 IPR017689 Outer membrane protein assembly factor BamD CHH28_RS09640 8184a750e6d629ce0a7cf8bc421cd9c9 273 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 239 32.714 T 29-03-2018 IPR017689 Outer membrane protein assembly factor BamD CHH28_RS06355 f57c2dc541d59fa73ba3856ed1748964 351 SUPERFAMILY SSF144064 4 339 1.47E-117 T 29-03-2018 CHH28_RS06355 f57c2dc541d59fa73ba3856ed1748964 351 Pfam PF05171 Haemin-degrading HemS.ChuX domain 29 155 2.7E-39 T 29-03-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 CHH28_RS06355 f57c2dc541d59fa73ba3856ed1748964 351 Pfam PF05171 Haemin-degrading HemS.ChuX domain 208 339 1.9E-33 T 29-03-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 CHH28_RS06355 f57c2dc541d59fa73ba3856ed1748964 351 Gene3D G3DSA:3.40.1570.10 183 345 1.8E-45 T 29-03-2018 CHH28_RS06355 f57c2dc541d59fa73ba3856ed1748964 351 Gene3D G3DSA:3.40.1570.10 5 165 9.6E-52 T 29-03-2018 CHH28_RS09710 71cd4740b3b204ec5410e8cc60109d6f 402 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 6 40 3.2E-13 T 29-03-2018 IPR011723 Zinc finger/thioredoxin putative CHH28_RS09710 71cd4740b3b204ec5410e8cc60109d6f 402 Pfam PF13719 zinc-ribbon domain 6 40 1.6E-10 T 29-03-2018 IPR011723 Zinc finger/thioredoxin putative CHH28_RS09710 71cd4740b3b204ec5410e8cc60109d6f 402 Pfam PF11906 Protein of unknown function (DUF3426) 253 395 1.3E-34 T 29-03-2018 IPR021834 Protein of unknown function DUF3426 CHH28_RS06465 5fe042fb1b1b99d168c42d86e376803a 171 SUPERFAMILY SSF55729 2 155 3.54E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS06465 5fe042fb1b1b99d168c42d86e376803a 171 Gene3D G3DSA:3.40.630.30 1 170 4.3E-16 T 29-03-2018 CHH28_RS06465 5fe042fb1b1b99d168c42d86e376803a 171 Pfam PF13302 Acetyltransferase (GNAT) domain 2 141 7.5E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS02440 11a5bb308fe643079da2dc2a70188634 157 Pfam PF03942 DTW domain 2 152 2.9E-29 T 29-03-2018 IPR005636 DTW CHH28_RS02440 11a5bb308fe643079da2dc2a70188634 157 SMART SM01144 1 157 6.6E-23 T 29-03-2018 IPR005636 DTW CHH28_RS02350 3567c656a589d214336626e08038f623 392 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CHH28_RS02350 3567c656a589d214336626e08038f623 392 Gene3D G3DSA:3.40.47.10 266 390 5.0E-37 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS02350 3567c656a589d214336626e08038f623 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 1.0E-148 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CHH28_RS02350 3567c656a589d214336626e08038f623 392 SUPERFAMILY SSF53901 272 392 7.69E-45 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS02350 3567c656a589d214336626e08038f623 392 Gene3D G3DSA:3.40.47.10 1 265 1.3E-62 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS02350 3567c656a589d214336626e08038f623 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CHH28_RS02350 3567c656a589d214336626e08038f623 392 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CHH28_RS02350 3567c656a589d214336626e08038f623 392 Pfam PF00108 Thiolase, N-terminal domain 4 263 1.8E-106 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CHH28_RS02350 3567c656a589d214336626e08038f623 392 SUPERFAMILY SSF53901 3 270 1.84E-90 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS02350 3567c656a589d214336626e08038f623 392 Pfam PF02803 Thiolase, C-terminal domain 271 392 3.3E-52 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CHH28_RS02350 3567c656a589d214336626e08038f623 392 PIRSF PIRSF000429 1 392 4.6E-132 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CHH28_RS11020 53af5f43cb326275618750ab65ebee45 121 SUPERFAMILY SSF46689 10 107 2.51E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS11020 53af5f43cb326275618750ab65ebee45 121 Pfam PF01527 Transposase 11 94 2.0E-15 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CHH28_RS11020 53af5f43cb326275618750ab65ebee45 121 Gene3D G3DSA:1.10.10.60 14 101 6.7E-18 T 29-03-2018 CHH28_RS17255 9b80adcd32675e0ecc54eaa211ae7def 613 TIGRFAM TIGR03545 TIGR03545: TIGR03545 family protein 4 550 9.3E-103 T 29-03-2018 IPR019934 Conserved hypothetical protein CHP03545 CHH28_RS08565 5a09415ac74114b4a0f2f1495f7dcdf8 345 SUPERFAMILY SSF53067 151 336 2.2E-47 T 29-03-2018 CHH28_RS08565 5a09415ac74114b4a0f2f1495f7dcdf8 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 70 93 3.5E-62 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CHH28_RS08565 5a09415ac74114b4a0f2f1495f7dcdf8 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 134 153 3.5E-62 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CHH28_RS08565 5a09415ac74114b4a0f2f1495f7dcdf8 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 50 68 3.5E-62 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CHH28_RS08565 5a09415ac74114b4a0f2f1495f7dcdf8 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 189 209 3.5E-62 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CHH28_RS08565 5a09415ac74114b4a0f2f1495f7dcdf8 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 302 328 3.5E-62 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CHH28_RS08565 5a09415ac74114b4a0f2f1495f7dcdf8 345 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 335 2.0E-155 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CHH28_RS08565 5a09415ac74114b4a0f2f1495f7dcdf8 345 Pfam PF06723 MreB/Mbl protein 11 336 9.6E-146 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CHH28_RS08565 5a09415ac74114b4a0f2f1495f7dcdf8 345 Gene3D G3DSA:3.30.420.40 249 319 1.8E-9 T 29-03-2018 CHH28_RS08565 5a09415ac74114b4a0f2f1495f7dcdf8 345 Gene3D G3DSA:3.30.420.40 164 248 3.4E-26 T 29-03-2018 CHH28_RS08565 5a09415ac74114b4a0f2f1495f7dcdf8 345 SUPERFAMILY SSF53067 10 150 8.91E-38 T 29-03-2018 CHH28_RS08565 5a09415ac74114b4a0f2f1495f7dcdf8 345 Gene3D G3DSA:3.30.420.40 8 163 3.9E-42 T 29-03-2018 CHH28_RS04025 79dc75ba10330591b578884e5fe1895e 98 Gene3D G3DSA:3.30.70.100 1 95 5.0E-17 T 29-03-2018 CHH28_RS04025 79dc75ba10330591b578884e5fe1895e 98 Pfam PF07045 Domain of unknown function (DUF1330) 5 81 5.8E-11 T 29-03-2018 IPR010753 Domain of unknown function DUF1330 CHH28_RS04025 79dc75ba10330591b578884e5fe1895e 98 SUPERFAMILY SSF54909 4 85 4.02E-12 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 SMART SM00052 619 865 8.6E-96 T 29-03-2018 IPR001633 EAL domain CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 Pfam PF00563 EAL domain 627 859 3.4E-68 T 29-03-2018 IPR001633 EAL domain CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 Pfam PF13426 PAS domain 103 199 0.065 T 29-03-2018 IPR000014 PAS domain CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 Pfam PF13426 PAS domain 335 437 4.5E-11 T 29-03-2018 IPR000014 PAS domain CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 SMART SM00267 438 609 3.0E-64 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 Gene3D G3DSA:3.30.70.270 445 610 3.2E-61 T 29-03-2018 CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 Gene3D G3DSA:3.20.20.450 611 876 3.8E-89 T 29-03-2018 IPR001633 EAL domain CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 Pfam PF00990 Diguanylate cyclase, GGDEF domain 449 604 1.7E-47 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 329 444 2.7E-18 T 29-03-2018 IPR000014 PAS domain CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 Gene3D G3DSA:3.30.450.20 70 198 5.5E-13 T 29-03-2018 CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 SMART SM00086 396 438 8.8E-7 T 29-03-2018 IPR001610 PAC motif CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 SUPERFAMILY SSF141868 626 872 7.06E-82 T 29-03-2018 IPR001633 EAL domain CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 Gene3D G3DSA:3.30.450.20 199 328 5.0E-12 T 29-03-2018 CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 SMART SM00091 324 390 2.8E-5 T 29-03-2018 IPR000014 PAS domain CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 SMART SM00091 91 156 2.4E-5 T 29-03-2018 IPR000014 PAS domain CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 SMART SM00091 208 273 15.0 T 29-03-2018 IPR000014 PAS domain CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 Pfam PF08448 PAS fold 219 317 2.1E-6 T 29-03-2018 IPR013656 PAS fold-4 CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 SUPERFAMILY SSF55785 198 304 1.57E-5 T 29-03-2018 IPR000014 PAS domain CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 Gene3D G3DSA:3.30.450.20 329 444 1.1E-23 T 29-03-2018 CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 447 609 1.5E-50 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 SUPERFAMILY SSF55785 78 194 1.44E-8 T 29-03-2018 IPR000014 PAS domain CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 SUPERFAMILY SSF55785 335 447 5.67E-27 T 29-03-2018 IPR000014 PAS domain CHH28_RS15710 074d11cec02716749df8853cef1868f5 876 SUPERFAMILY SSF55073 454 611 6.43E-50 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS12825 fd6b79c58e3b196530e08741eb552212 580 SUPERFAMILY SSF90123 6 319 5.1E-70 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS12825 fd6b79c58e3b196530e08741eb552212 580 Pfam PF00005 ABC transporter 351 499 7.0E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS12825 fd6b79c58e3b196530e08741eb552212 580 Pfam PF00664 ABC transporter transmembrane region 20 291 9.3E-40 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS12825 fd6b79c58e3b196530e08741eb552212 580 SMART SM00382 360 546 1.1E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS12825 fd6b79c58e3b196530e08741eb552212 580 Gene3D G3DSA:1.20.1560.10 1 323 4.1E-61 T 29-03-2018 CHH28_RS12825 fd6b79c58e3b196530e08741eb552212 580 Gene3D G3DSA:3.40.50.300 324 576 4.2E-69 T 29-03-2018 CHH28_RS12825 fd6b79c58e3b196530e08741eb552212 580 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS12825 fd6b79c58e3b196530e08741eb552212 580 SUPERFAMILY SSF52540 332 571 1.6E-79 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS16235 2a2581f1077bb8a16e1f5e1fd06974c4 655 Pfam PF09826 Beta propeller domain 79 649 2.3E-97 T 29-03-2018 IPR019198 Beta propeller domain-containing family CHH28_RS16235 2a2581f1077bb8a16e1f5e1fd06974c4 655 Gene3D G3DSA:2.130.10.120 98 417 0.0033 T 29-03-2018 CHH28_RS08760 2d21e5f3cf959abf098a6ae15bda3429 210 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 206 6.0E-65 T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CHH28_RS08760 2d21e5f3cf959abf098a6ae15bda3429 210 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 2 210 36.108 T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CHH28_RS08760 2d21e5f3cf959abf098a6ae15bda3429 210 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 132 147 - T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CHH28_RS08760 2d21e5f3cf959abf098a6ae15bda3429 210 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 8.2E-60 T 29-03-2018 CHH28_RS08760 2d21e5f3cf959abf098a6ae15bda3429 210 Gene3D G3DSA:3.40.50.150 1 206 1.4E-31 T 29-03-2018 CHH28_RS08760 2d21e5f3cf959abf098a6ae15bda3429 210 SUPERFAMILY SSF53335 13 207 2.76E-40 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS12030 73bb3f1d92304f9e627baa4d88c1e3b8 407 Gene3D G3DSA:2.40.30.10 137 256 2.3E-33 T 29-03-2018 CHH28_RS12030 73bb3f1d92304f9e627baa4d88c1e3b8 407 SUPERFAMILY SSF63380 105 272 2.27E-37 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CHH28_RS12030 73bb3f1d92304f9e627baa4d88c1e3b8 407 Pfam PF00970 Oxidoreductase FAD-binding domain 199 266 1.1E-10 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CHH28_RS12030 73bb3f1d92304f9e627baa4d88c1e3b8 407 SUPERFAMILY SSF52343 257 403 4.19E-37 T 29-03-2018 CHH28_RS12030 73bb3f1d92304f9e627baa4d88c1e3b8 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 40 115 7.9E-11 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CHH28_RS12030 73bb3f1d92304f9e627baa4d88c1e3b8 407 SUPERFAMILY SSF54292 38 124 7.79E-23 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CHH28_RS12030 73bb3f1d92304f9e627baa4d88c1e3b8 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 3 407 64.729 T 29-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 CHH28_RS12030 73bb3f1d92304f9e627baa4d88c1e3b8 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 5 407 4.5E-221 T 29-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 CHH28_RS12030 73bb3f1d92304f9e627baa4d88c1e3b8 407 PIRSF PIRSF000044 1 407 5.8E-221 T 29-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 CHH28_RS12030 73bb3f1d92304f9e627baa4d88c1e3b8 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 1.3E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CHH28_RS12030 73bb3f1d92304f9e627baa4d88c1e3b8 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 1.3E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CHH28_RS12030 73bb3f1d92304f9e627baa4d88c1e3b8 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 1.3E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CHH28_RS12030 73bb3f1d92304f9e627baa4d88c1e3b8 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 1.3E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CHH28_RS12030 73bb3f1d92304f9e627baa4d88c1e3b8 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 314 325 1.3E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CHH28_RS12030 73bb3f1d92304f9e627baa4d88c1e3b8 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 386 1.2E-17 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CHH28_RS12030 73bb3f1d92304f9e627baa4d88c1e3b8 407 Gene3D G3DSA:3.40.50.80 257 401 2.2E-29 T 29-03-2018 CHH28_RS12030 73bb3f1d92304f9e627baa4d88c1e3b8 407 Gene3D G3DSA:3.10.20.30 31 136 5.0E-21 T 29-03-2018 IPR012675 Beta-grasp domain CHH28_RS16765 52e1e8fd0466977710f24cbc796c3f80 537 SMART SM00382 33 232 4.2E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS16765 52e1e8fd0466977710f24cbc796c3f80 537 SMART SM00382 309 502 2.6E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS16765 52e1e8fd0466977710f24cbc796c3f80 537 SUPERFAMILY SSF52540 7 253 9.3E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS16765 52e1e8fd0466977710f24cbc796c3f80 537 ProSitePatterns PS00211 ABC transporters family signature. 425 439 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS16765 52e1e8fd0466977710f24cbc796c3f80 537 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS16765 52e1e8fd0466977710f24cbc796c3f80 537 Gene3D G3DSA:3.40.50.300 272 537 3.0E-75 T 29-03-2018 CHH28_RS16765 52e1e8fd0466977710f24cbc796c3f80 537 Gene3D G3DSA:3.40.50.300 3 271 2.8E-67 T 29-03-2018 CHH28_RS16765 52e1e8fd0466977710f24cbc796c3f80 537 Pfam PF00005 ABC transporter 301 453 8.1E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS16765 52e1e8fd0466977710f24cbc796c3f80 537 Pfam PF00005 ABC transporter 25 182 1.9E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS16765 52e1e8fd0466977710f24cbc796c3f80 537 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 504 530 4.2E-5 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CHH28_RS16765 52e1e8fd0466977710f24cbc796c3f80 537 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 265 1.4E-4 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CHH28_RS16765 52e1e8fd0466977710f24cbc796c3f80 537 SUPERFAMILY SSF52540 273 524 5.22E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS12790 db7ff83650d2006cee9c8507bb6ef65c 280 Hamap MF_00443 Thiazole synthase [thiG]. 14 272 39.556 T 29-03-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CHH28_RS12790 db7ff83650d2006cee9c8507bb6ef65c 280 Gene3D G3DSA:3.20.20.70 12 280 4.3E-45 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS12790 db7ff83650d2006cee9c8507bb6ef65c 280 SUPERFAMILY SSF110399 13 256 4.05E-74 T 29-03-2018 CHH28_RS12790 db7ff83650d2006cee9c8507bb6ef65c 280 Pfam PF05690 Thiazole biosynthesis protein ThiG 17 266 9.1E-98 T 29-03-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CHH28_RS06105 736d6aa4758d15b614456450a14ceded 61 Gene3D G3DSA:3.30.1390.20 6 60 1.1E-25 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CHH28_RS06105 736d6aa4758d15b614456450a14ceded 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 60 22.094 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06105 736d6aa4758d15b614456450a14ceded 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 6 59 9.7E-27 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06105 736d6aa4758d15b614456450a14ceded 61 ProSitePatterns PS00634 Ribosomal protein L30 signature. 24 56 - T 29-03-2018 IPR018038 Ribosomal protein L30, conserved site CHH28_RS06105 736d6aa4758d15b614456450a14ceded 61 SUPERFAMILY SSF55129 4 59 2.62E-22 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CHH28_RS06105 736d6aa4758d15b614456450a14ceded 61 Pfam PF00327 Ribosomal protein L30p/L7e 6 56 3.0E-21 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CHH28_RS06105 736d6aa4758d15b614456450a14ceded 61 PIRSF PIRSF002211 1 61 2.1E-28 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS14050 ffb5769220656d0cbfc7daf6102b0d77 629 Pfam PF13624 SurA N-terminal domain 18 180 2.4E-42 T 29-03-2018 CHH28_RS14050 ffb5769220656d0cbfc7daf6102b0d77 629 SUPERFAMILY SSF109998 61 184 4.32E-28 T 29-03-2018 IPR027304 Trigger factor/SurA domain CHH28_RS14050 ffb5769220656d0cbfc7daf6102b0d77 629 SUPERFAMILY SSF109998 218 258 4.32E-28 T 29-03-2018 IPR027304 Trigger factor/SurA domain CHH28_RS14050 ffb5769220656d0cbfc7daf6102b0d77 629 Gene3D G3DSA:3.10.50.40 275 408 8.4E-35 T 29-03-2018 CHH28_RS14050 ffb5769220656d0cbfc7daf6102b0d77 629 Gene3D G3DSA:3.10.50.40 409 518 1.6E-7 T 29-03-2018 CHH28_RS14050 ffb5769220656d0cbfc7daf6102b0d77 629 SUPERFAMILY SSF54534 283 384 1.83E-26 T 29-03-2018 CHH28_RS14050 ffb5769220656d0cbfc7daf6102b0d77 629 Pfam PF13616 PPIC-type PPIASE domain 281 381 5.3E-28 T 29-03-2018 CHH28_RS14050 ffb5769220656d0cbfc7daf6102b0d77 629 Gene3D G3DSA:1.10.4030.10 57 187 5.4E-18 T 29-03-2018 CHH28_RS14050 ffb5769220656d0cbfc7daf6102b0d77 629 Gene3D G3DSA:1.10.4030.10 209 253 0.11 T 29-03-2018 CHH28_RS14050 ffb5769220656d0cbfc7daf6102b0d77 629 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 321 342 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CHH28_RS14355 5832056f3f3aa73a87744a6c4fd71108 126 Pfam PF02635 DsrE/DsrF-like family 3 126 2.9E-19 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CHH28_RS14355 5832056f3f3aa73a87744a6c4fd71108 126 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 3 126 4.4E-33 T 29-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 CHH28_RS14355 5832056f3f3aa73a87744a6c4fd71108 126 SUPERFAMILY SSF75169 1 126 2.49E-24 T 29-03-2018 IPR027396 DsrEFH-like CHH28_RS14355 5832056f3f3aa73a87744a6c4fd71108 126 Gene3D G3DSA:3.40.1260.10 1 126 1.1E-20 T 29-03-2018 CHH28_RS00075 46718bcb1e6d66fbf40c41a5fa6100d6 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 6.8E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS00075 46718bcb1e6d66fbf40c41a5fa6100d6 163 Gene3D G3DSA:3.30.700.10 11 162 3.7E-7 T 29-03-2018 CHH28_RS00075 46718bcb1e6d66fbf40c41a5fa6100d6 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 2.8E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS00075 46718bcb1e6d66fbf40c41a5fa6100d6 163 SUPERFAMILY SSF54523 11 75 2.9E-5 T 29-03-2018 CHH28_RS00075 46718bcb1e6d66fbf40c41a5fa6100d6 163 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS06485 da27336cc0804862e542bbb1bb974a22 341 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 37 320 3.4E-54 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CHH28_RS06485 da27336cc0804862e542bbb1bb974a22 341 Gene3D G3DSA:3.40.190.10 171 332 2.2E-28 T 29-03-2018 CHH28_RS06485 da27336cc0804862e542bbb1bb974a22 341 SUPERFAMILY SSF53850 33 336 1.23E-62 T 29-03-2018 CHH28_RS06485 da27336cc0804862e542bbb1bb974a22 341 Gene3D G3DSA:3.40.190.10 29 170 7.3E-20 T 29-03-2018 CHH28_RS07880 6c25690082b469e65e0cfec73a0c4659 521 Gene3D G3DSA:2.40.160.50 171 511 2.7E-31 T 29-03-2018 CHH28_RS07880 6c25690082b469e65e0cfec73a0c4659 521 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 199 496 7.7E-64 T 29-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal CHH28_RS07880 6c25690082b469e65e0cfec73a0c4659 521 Pfam PF08479 POTRA domain, ShlB-type 64 139 5.5E-24 T 29-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type CHH28_RS07880 6c25690082b469e65e0cfec73a0c4659 521 Gene3D G3DSA:3.10.20.310 67 139 1.7E-18 T 29-03-2018 CHH28_RS07880 6c25690082b469e65e0cfec73a0c4659 521 PIRSF PIRSF029745 3 511 9.6E-113 T 29-03-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 CHH28_RS07880 6c25690082b469e65e0cfec73a0c4659 521 Pfam PF17287 POTRA domain 141 194 4.4E-12 T 29-03-2018 IPR035251 ShlB, POTRA domain CHH28_RS18960 05d29f4be8d71a1da302f44de0c6e377 148 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 148 5.7E-49 T 29-03-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 CHH28_RS18960 05d29f4be8d71a1da302f44de0c6e377 148 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CHH28_RS18960 05d29f4be8d71a1da302f44de0c6e377 148 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 101 146 4.4E-16 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CHH28_RS18960 05d29f4be8d71a1da302f44de0c6e377 148 Pfam PF00460 Flagella basal body rod protein 7 31 6.5E-9 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CHH28_RS19315 fc789b687c735c0db7737107ab2f822a 383 Gene3D G3DSA:2.130.10.10 52 127 1.0E-4 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS19315 fc789b687c735c0db7737107ab2f822a 383 Gene3D G3DSA:2.130.10.10 128 380 3.8E-17 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS19315 fc789b687c735c0db7737107ab2f822a 383 Pfam PF07433 Protein of unknown function (DUF1513) 66 375 4.1E-83 T 29-03-2018 IPR008311 Uncharacterised conserved protein UCP028101 CHH28_RS19315 fc789b687c735c0db7737107ab2f822a 383 SUPERFAMILY SSF50969 275 359 4.94E-19 T 29-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CHH28_RS19315 fc789b687c735c0db7737107ab2f822a 383 SUPERFAMILY SSF50969 83 239 4.94E-19 T 29-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CHH28_RS19315 fc789b687c735c0db7737107ab2f822a 383 PIRSF PIRSF028101 1 377 1.2E-80 T 29-03-2018 IPR008311 Uncharacterised conserved protein UCP028101 CHH28_RS19050 686de3a9fa6bf39db054982290158567 646 SUPERFAMILY SSF117892 61 186 2.48E-8 T 29-03-2018 IPR001107 Band 7 domain CHH28_RS09525 270c41bf3d424819088adcc3dd0cff95 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 5.1E-43 T 29-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS09525 270c41bf3d424819088adcc3dd0cff95 103 SUPERFAMILY SSF141091 1 101 3.53E-40 T 29-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS09525 270c41bf3d424819088adcc3dd0cff95 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.3E-41 T 29-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS09525 270c41bf3d424819088adcc3dd0cff95 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 29-03-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS09525 270c41bf3d424819088adcc3dd0cff95 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.487 T 29-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS13635 081c605c3b76ba5a21e34739eb6baccd 372 Pfam PF13692 Glycosyl transferases group 1 212 339 3.9E-11 T 29-03-2018 CHH28_RS13635 081c605c3b76ba5a21e34739eb6baccd 372 Gene3D G3DSA:3.40.50.2000 201 353 4.2E-19 T 29-03-2018 CHH28_RS13635 081c605c3b76ba5a21e34739eb6baccd 372 SUPERFAMILY SSF53756 75 371 6.28E-27 T 29-03-2018 CHH28_RS13635 081c605c3b76ba5a21e34739eb6baccd 372 SUPERFAMILY SSF53756 12 47 6.28E-27 T 29-03-2018 CHH28_RS01465 6787f06242c13de113f487e01ef79947 316 SUPERFAMILY SSF53474 46 312 4.73E-51 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS01465 6787f06242c13de113f487e01ef79947 316 Gene3D G3DSA:3.40.50.1820 48 316 1.7E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS01465 6787f06242c13de113f487e01ef79947 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 142 155 1.9E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS01465 6787f06242c13de113f487e01ef79947 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 258 272 1.9E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS01465 6787f06242c13de113f487e01ef79947 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 112 1.9E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS01465 6787f06242c13de113f487e01ef79947 316 Pfam PF00561 alpha/beta hydrolase fold 72 297 1.2E-20 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS18080 7b8f60bcfec7e831bbcedcbd1408bc9a 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.3E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS18080 7b8f60bcfec7e831bbcedcbd1408bc9a 311 SUPERFAMILY SSF53850 90 307 3.08E-39 T 29-03-2018 CHH28_RS18080 7b8f60bcfec7e831bbcedcbd1408bc9a 311 Gene3D G3DSA:3.40.190.10 91 204 4.9E-21 T 29-03-2018 CHH28_RS18080 7b8f60bcfec7e831bbcedcbd1408bc9a 311 Gene3D G3DSA:3.40.190.10 227 311 4.9E-7 T 29-03-2018 CHH28_RS18080 7b8f60bcfec7e831bbcedcbd1408bc9a 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS18080 7b8f60bcfec7e831bbcedcbd1408bc9a 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS18080 7b8f60bcfec7e831bbcedcbd1408bc9a 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS18080 7b8f60bcfec7e831bbcedcbd1408bc9a 311 SUPERFAMILY SSF46785 2 87 2.0E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS18080 7b8f60bcfec7e831bbcedcbd1408bc9a 311 Gene3D G3DSA:1.10.10.10 2 90 1.7E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS18080 7b8f60bcfec7e831bbcedcbd1408bc9a 311 Pfam PF03466 LysR substrate binding domain 95 307 3.8E-18 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS15745 38862858da3d2d9dd5b1ddef349d83ae 405 SUPERFAMILY SSF53901 213 401 5.76E-60 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS15745 38862858da3d2d9dd5b1ddef349d83ae 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 360 5.5E-29 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CHH28_RS15745 38862858da3d2d9dd5b1ddef349d83ae 405 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site CHH28_RS15745 38862858da3d2d9dd5b1ddef349d83ae 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 7.1E-45 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CHH28_RS15745 38862858da3d2d9dd5b1ddef349d83ae 405 SUPERFAMILY SSF53901 1 251 1.53E-62 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS15745 38862858da3d2d9dd5b1ddef349d83ae 405 Gene3D G3DSA:3.40.47.10 4 257 3.6E-61 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS15745 38862858da3d2d9dd5b1ddef349d83ae 405 SMART SM00825 Beta-ketoacyl synthase 4 405 6.2E-13 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CHH28_RS15745 38862858da3d2d9dd5b1ddef349d83ae 405 Gene3D G3DSA:3.40.47.10 260 405 4.6E-40 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS13595 de0ada8213406539ad5093f2e2497cc4 299 SUPERFAMILY SSF55486 148 177 2.48E-5 T 29-03-2018 CHH28_RS13595 de0ada8213406539ad5093f2e2497cc4 299 SUPERFAMILY SSF55486 212 236 2.48E-5 T 29-03-2018 CHH28_RS13595 de0ada8213406539ad5093f2e2497cc4 299 Gene3D G3DSA:3.40.390.10 38 286 1.6E-7 T 29-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CHH28_RS13595 de0ada8213406539ad5093f2e2497cc4 299 Pfam PF05572 Pregnancy-associated plasma protein-A 154 253 1.0E-7 T 29-03-2018 IPR008754 Peptidase M43, pregnancy-associated plasma-A Reactome: R-HSA-381426 CHH28_RS05290 a87b7cf68112846bec6793bbee263221 264 Gene3D G3DSA:3.40.190.10 23 107 1.3E-8 T 29-03-2018 CHH28_RS05290 a87b7cf68112846bec6793bbee263221 264 SMART SM00062 46 259 0.0057 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS05290 a87b7cf68112846bec6793bbee263221 264 SUPERFAMILY SSF53850 32 244 3.65E-30 T 29-03-2018 CHH28_RS05290 a87b7cf68112846bec6793bbee263221 264 Gene3D G3DSA:3.40.190.10 108 213 7.4E-9 T 29-03-2018 CHH28_RS05290 a87b7cf68112846bec6793bbee263221 264 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 242 1.2E-17 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS06990 422d1a36b5f8c1eab7e30c17a255d328 136 Pfam PF06271 RDD family 10 125 1.4E-11 T 29-03-2018 IPR010432 RDD CHH28_RS16770 e13b2dfc683ab6f2e0761bef1e6de20a 205 Gene3D G3DSA:1.10.260.40 37 66 1.2E-11 T 29-03-2018 CHH28_RS16770 e13b2dfc683ab6f2e0761bef1e6de20a 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.5E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS16770 e13b2dfc683ab6f2e0761bef1e6de20a 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.5E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS16770 e13b2dfc683ab6f2e0761bef1e6de20a 205 SUPERFAMILY SSF48498 85 192 8.53E-23 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CHH28_RS16770 e13b2dfc683ab6f2e0761bef1e6de20a 205 Gene3D G3DSA:1.10.357.10 67 199 7.8E-24 T 29-03-2018 CHH28_RS16770 e13b2dfc683ab6f2e0761bef1e6de20a 205 SUPERFAMILY SSF46689 5 77 1.09E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS16770 e13b2dfc683ab6f2e0761bef1e6de20a 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 1.5E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS16770 e13b2dfc683ab6f2e0761bef1e6de20a 205 Gene3D G3DSA:1.10.10.60 3 36 1.7E-14 T 29-03-2018 CHH28_RS16770 e13b2dfc683ab6f2e0761bef1e6de20a 205 Pfam PF13305 WHG domain 90 173 1.3E-17 T 29-03-2018 IPR025996 WHG domain CHH28_RS10450 dcccf36b3c8fb7683fa08eb474772aba 151 SUPERFAMILY SSF55729 4 149 2.4E-21 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS10450 dcccf36b3c8fb7683fa08eb474772aba 151 Gene3D G3DSA:3.40.630.30 2 150 6.9E-20 T 29-03-2018 CHH28_RS10450 dcccf36b3c8fb7683fa08eb474772aba 151 Pfam PF13673 Acetyltransferase (GNAT) domain 33 149 9.7E-10 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS01135 90a6371474c9ad1893f0cd2809ba18c0 179 Pfam PF03929 PepSY-associated TM region 8 152 1.6E-9 T 29-03-2018 IPR005625 PepSY-associated TM protein CHH28_RS09275 220e5b361d3b75d8f5dbf61c01c31bea 182 SUPERFAMILY SSF55729 3 177 2.01E-37 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS09275 220e5b361d3b75d8f5dbf61c01c31bea 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 155 8.2E-22 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS09275 220e5b361d3b75d8f5dbf61c01c31bea 182 Gene3D G3DSA:3.40.630.30 2 182 5.3E-23 T 29-03-2018 CHH28_RS02000 20bdc67c13bcb7e6e1ee952ccad39ef5 582 Gene3D G3DSA:1.20.1560.10 3 321 8.4E-25 T 29-03-2018 CHH28_RS02000 20bdc67c13bcb7e6e1ee952ccad39ef5 582 SMART SM00382 361 554 1.2E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS02000 20bdc67c13bcb7e6e1ee952ccad39ef5 582 Gene3D G3DSA:3.40.50.300 325 571 6.0E-59 T 29-03-2018 CHH28_RS02000 20bdc67c13bcb7e6e1ee952ccad39ef5 582 SUPERFAMILY SSF90123 17 327 5.1E-47 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS02000 20bdc67c13bcb7e6e1ee952ccad39ef5 582 Pfam PF00664 ABC transporter transmembrane region 29 282 1.0E-15 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS02000 20bdc67c13bcb7e6e1ee952ccad39ef5 582 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS02000 20bdc67c13bcb7e6e1ee952ccad39ef5 582 Pfam PF00005 ABC transporter 352 499 7.7E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS02000 20bdc67c13bcb7e6e1ee952ccad39ef5 582 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 19 561 8.2E-227 T 29-03-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 CHH28_RS02000 20bdc67c13bcb7e6e1ee952ccad39ef5 582 SUPERFAMILY SSF52540 325 559 6.85E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09570 335c1f9d8e9188be78bd5f987c1b98c7 170 ProSitePatterns PS00855 Signal peptidases II signature. 103 115 - T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CHH28_RS09570 335c1f9d8e9188be78bd5f987c1b98c7 170 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 6 161 16.149 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CHH28_RS09570 335c1f9d8e9188be78bd5f987c1b98c7 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 136 152 1.2E-18 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CHH28_RS09570 335c1f9d8e9188be78bd5f987c1b98c7 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 100 115 1.2E-18 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CHH28_RS09570 335c1f9d8e9188be78bd5f987c1b98c7 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 52 60 1.2E-18 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CHH28_RS09570 335c1f9d8e9188be78bd5f987c1b98c7 170 TIGRFAM TIGR00077 lspA: signal peptidase II 7 160 5.6E-39 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CHH28_RS09570 335c1f9d8e9188be78bd5f987c1b98c7 170 Pfam PF01252 Signal peptidase (SPase) II 15 155 9.6E-37 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CHH28_RS19300 77eeea7995ebd53b66ff6edb94232aca 418 Pfam PF03150 Di-haem cytochrome c peroxidase 234 337 1.1E-5 T 29-03-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CHH28_RS19300 77eeea7995ebd53b66ff6edb94232aca 418 Pfam PF03150 Di-haem cytochrome c peroxidase 36 218 2.2E-39 T 29-03-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CHH28_RS19300 77eeea7995ebd53b66ff6edb94232aca 418 SUPERFAMILY SSF46626 206 341 8.48E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS19300 77eeea7995ebd53b66ff6edb94232aca 418 SUPERFAMILY SSF46626 33 205 1.32E-32 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS19300 77eeea7995ebd53b66ff6edb94232aca 418 Gene3D G3DSA:1.10.760.10 24 228 4.9E-32 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS19300 77eeea7995ebd53b66ff6edb94232aca 418 Gene3D G3DSA:1.10.760.10 229 412 5.3E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS08460 0afcc76478093d3d31fbcee8d484a5cc 251 Pfam PF02167 Cytochrome C1 family 31 249 3.2E-16 T 29-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CHH28_RS08460 0afcc76478093d3d31fbcee8d484a5cc 251 Gene3D G3DSA:1.20.5.100 220 250 2.9E-16 T 29-03-2018 CHH28_RS08460 0afcc76478093d3d31fbcee8d484a5cc 251 SUPERFAMILY SSF46626 16 159 6.69E-47 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS08460 0afcc76478093d3d31fbcee8d484a5cc 251 SUPERFAMILY SSF46626 192 215 6.69E-47 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS08460 0afcc76478093d3d31fbcee8d484a5cc 251 Gene3D G3DSA:1.10.760.10 24 216 6.8E-53 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS15935 a0c696e369e4916a34b91ed504cd8925 190 Gene3D G3DSA:3.90.79.10 2 182 2.3E-39 T 29-03-2018 CHH28_RS15935 a0c696e369e4916a34b91ed504cd8925 190 Pfam PF00293 NUDIX domain 29 139 8.0E-13 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CHH28_RS15935 a0c696e369e4916a34b91ed504cd8925 190 SUPERFAMILY SSF55811 26 173 2.44E-29 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CHH28_RS13465 a4e6969bdf37434ec4bebde74329d2e4 343 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 81 100 - T 29-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CHH28_RS13465 a4e6969bdf37434ec4bebde74329d2e4 343 Pfam PF01180 Dihydroorotate dehydrogenase 46 336 5.7E-89 T 29-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CHH28_RS13465 a4e6969bdf37434ec4bebde74329d2e4 343 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 29-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CHH28_RS13465 a4e6969bdf37434ec4bebde74329d2e4 343 PIRSF PIRSF000164 14 342 4.5E-96 T 29-03-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 CHH28_RS13465 a4e6969bdf37434ec4bebde74329d2e4 343 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 4 338 8.6E-131 T 29-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CHH28_RS13465 a4e6969bdf37434ec4bebde74329d2e4 343 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 3 336 49.573 T 29-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CHH28_RS13465 a4e6969bdf37434ec4bebde74329d2e4 343 SUPERFAMILY SSF51395 4 338 1.77E-102 T 29-03-2018 CHH28_RS13465 a4e6969bdf37434ec4bebde74329d2e4 343 Gene3D G3DSA:3.20.20.70 2 343 7.5E-85 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS14080 732d396ceed22109c910698ab25909b1 163 PIRSF PIRSF030820 1 163 1.2E-51 T 29-03-2018 IPR008318 Uncharacterised conserved protein UCP030820 CHH28_RS14080 732d396ceed22109c910698ab25909b1 163 Pfam PF06073 Bacterial protein of unknown function (DUF934) 53 159 3.2E-40 T 29-03-2018 IPR008318 Uncharacterised conserved protein UCP030820 CHH28_RS07595 0b9ba32c7bde40682563dbb610947c74 155 Pfam PF10517 Electron transfer DM13 64 154 3.0E-13 T 29-03-2018 IPR019545 DM13 domain CHH28_RS09225 8a4a2b598b0b944fbbd6ff10414272d1 588 Pfam PF13365 Trypsin-like peptidase domain 204 364 2.8E-10 T 29-03-2018 CHH28_RS09225 8a4a2b598b0b944fbbd6ff10414272d1 588 Gene3D G3DSA:2.60.120.380 492 588 2.5E-9 T 29-03-2018 CHH28_RS09225 8a4a2b598b0b944fbbd6ff10414272d1 588 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 508 573 2.6E-12 T 29-03-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial CHH28_RS09225 8a4a2b598b0b944fbbd6ff10414272d1 588 PRINTS PR00839 V8 serine protease family signature 338 354 2.0E-5 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CHH28_RS09225 8a4a2b598b0b944fbbd6ff10414272d1 588 PRINTS PR00839 V8 serine protease family signature 205 222 2.0E-5 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CHH28_RS09225 8a4a2b598b0b944fbbd6ff10414272d1 588 PRINTS PR00839 V8 serine protease family signature 356 368 2.0E-5 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CHH28_RS09225 8a4a2b598b0b944fbbd6ff10414272d1 588 Pfam PF00801 PKD domain 410 472 2.5E-13 T 29-03-2018 IPR000601 PKD domain CHH28_RS09225 8a4a2b598b0b944fbbd6ff10414272d1 588 Gene3D G3DSA:2.60.40.10 401 485 1.2E-23 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS09225 8a4a2b598b0b944fbbd6ff10414272d1 588 SUPERFAMILY SSF49299 402 482 2.75E-23 T 29-03-2018 IPR000601 PKD domain CHH28_RS09225 8a4a2b598b0b944fbbd6ff10414272d1 588 Gene3D G3DSA:2.40.10.10 271 395 6.7E-24 T 29-03-2018 CHH28_RS09225 8a4a2b598b0b944fbbd6ff10414272d1 588 SMART SM00089 405 483 1.9E-20 T 29-03-2018 IPR022409 PKD/Chitinase domain CHH28_RS09225 8a4a2b598b0b944fbbd6ff10414272d1 588 SUPERFAMILY SSF50494 186 394 3.24E-20 T 29-03-2018 IPR009003 Peptidase S1, PA clan CHH28_RS09225 8a4a2b598b0b944fbbd6ff10414272d1 588 Gene3D G3DSA:2.40.10.10 86 270 1.8E-5 T 29-03-2018 CHH28_RS04510 0d4e6545c700a06c1647204d96221776 196 Gene3D G3DSA:1.10.10.10 102 187 2.2E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04510 0d4e6545c700a06c1647204d96221776 196 Pfam PF08281 Sigma-70, region 4 129 179 1.2E-10 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS04510 0d4e6545c700a06c1647204d96221776 196 Gene3D G3DSA:1.10.1740.10 6 89 1.7E-18 T 29-03-2018 CHH28_RS04510 0d4e6545c700a06c1647204d96221776 196 Pfam PF04542 Sigma-70 region 2 10 77 3.9E-16 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS04510 0d4e6545c700a06c1647204d96221776 196 SUPERFAMILY SSF88946 8 86 4.71E-19 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS04510 0d4e6545c700a06c1647204d96221776 196 SUPERFAMILY SSF88659 121 184 2.43E-12 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS04510 0d4e6545c700a06c1647204d96221776 196 TIGRFAM TIGR02943 Sig70_famx1: RNA polymerase sigma-70 factor, TIGR02943 family 6 191 7.2E-68 T 29-03-2018 IPR014289 RNA polymerase sigma-24-related CHH28_RS04510 0d4e6545c700a06c1647204d96221776 196 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 183 3.1E-27 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CHH28_RS13315 19fe1c95d1c6de59f4fc8a79064ff7a4 489 SUPERFAMILY SSF56349 120 183 3.3E-26 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CHH28_RS13315 19fe1c95d1c6de59f4fc8a79064ff7a4 489 SUPERFAMILY SSF56349 220 460 3.3E-26 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CHH28_RS13315 19fe1c95d1c6de59f4fc8a79064ff7a4 489 Pfam PF00589 Phage integrase family 301 443 1.4E-11 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CHH28_RS13315 19fe1c95d1c6de59f4fc8a79064ff7a4 489 Gene3D G3DSA:1.10.150.130 114 268 6.6E-7 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CHH28_RS13315 19fe1c95d1c6de59f4fc8a79064ff7a4 489 Gene3D G3DSA:1.10.443.10 270 462 2.6E-20 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CHH28_RS11975 18c28fadf3179a76a328651d839d14a9 158 SUPERFAMILY SSF54523 6 93 2.2E-13 T 29-03-2018 CHH28_RS11975 18c28fadf3179a76a328651d839d14a9 158 Gene3D G3DSA:3.30.700.10 6 156 1.0E-16 T 29-03-2018 CHH28_RS11975 18c28fadf3179a76a328651d839d14a9 158 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 26 2.4E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS11975 18c28fadf3179a76a328651d839d14a9 158 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 3.9E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS17035 3d1b183e6e2710f2af7a126422215d53 809 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 169 8.3E-15 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS17035 3d1b183e6e2710f2af7a126422215d53 809 Pfam PF00593 TonB dependent receptor 329 808 1.3E-30 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS17035 3d1b183e6e2710f2af7a126422215d53 809 Gene3D G3DSA:2.170.130.10 32 176 2.6E-22 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS17035 3d1b183e6e2710f2af7a126422215d53 809 SUPERFAMILY SSF56935 33 278 5.23E-96 T 29-03-2018 CHH28_RS17035 3d1b183e6e2710f2af7a126422215d53 809 SUPERFAMILY SSF56935 325 809 5.23E-96 T 29-03-2018 CHH28_RS17035 3d1b183e6e2710f2af7a126422215d53 809 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 792 809 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site CHH28_RS17035 3d1b183e6e2710f2af7a126422215d53 809 Gene3D G3DSA:2.40.170.20 177 809 1.9E-58 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 Gene3D G3DSA:3.50.50.60 2 154 4.7E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 399 414 5.1E-71 T 29-03-2018 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 421 441 5.1E-71 T 29-03-2018 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 5.1E-71 T 29-03-2018 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 333 354 5.1E-71 T 29-03-2018 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.1E-71 T 29-03-2018 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 5.1E-71 T 29-03-2018 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 5.1E-71 T 29-03-2018 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 5.1E-71 T 29-03-2018 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 5.1E-71 T 29-03-2018 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 SUPERFAMILY SSF51905 1 321 7.2E-59 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 9.8E-32 T 29-03-2018 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 9.8E-32 T 29-03-2018 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 9.8E-32 T 29-03-2018 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 9.8E-32 T 29-03-2018 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 9.8E-32 T 29-03-2018 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 Gene3D G3DSA:3.30.390.30 324 450 9.5E-38 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 317 1.9E-74 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 337 446 3.3E-33 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 SUPERFAMILY SSF55424 334 447 3.44E-34 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 PIRSF PIRSF000350 1 444 6.3E-90 T 29-03-2018 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 Gene3D G3DSA:3.40.50.720 155 323 1.1E-37 T 29-03-2018 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 3 447 6.5E-190 T 29-03-2018 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 CHH28_RS14525 115008359c80a5f2b978499ac0fec563 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CHH28_RS03705 12a8ec960bd705082efe60f0afa1ba35 209 Pfam PF13649 Methyltransferase domain 44 137 2.7E-25 T 29-03-2018 CHH28_RS03705 12a8ec960bd705082efe60f0afa1ba35 209 SUPERFAMILY SSF53335 7 196 4.22E-42 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS03705 12a8ec960bd705082efe60f0afa1ba35 209 Gene3D G3DSA:3.40.50.150 4 205 3.8E-38 T 29-03-2018 CHH28_RS09870 a245475b646067160af43387fbd66564 378 Gene3D G3DSA:1.10.540.10 1 121 2.2E-40 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS09870 a245475b646067160af43387fbd66564 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 1.5E-28 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CHH28_RS09870 a245475b646067160af43387fbd66564 378 SUPERFAMILY SSF47203 228 377 1.93E-49 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS09870 a245475b646067160af43387fbd66564 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 119 1.1E-37 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS09870 a245475b646067160af43387fbd66564 378 SUPERFAMILY SSF56645 5 242 1.44E-93 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CHH28_RS09870 a245475b646067160af43387fbd66564 378 Gene3D G3DSA:2.40.110.10 122 221 1.2E-41 T 29-03-2018 CHH28_RS09870 a245475b646067160af43387fbd66564 378 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CHH28_RS09870 a245475b646067160af43387fbd66564 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CHH28_RS09870 a245475b646067160af43387fbd66564 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 377 2.5E-44 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS09870 a245475b646067160af43387fbd66564 378 Gene3D G3DSA:1.20.140.10 222 378 2.2E-54 T 29-03-2018 CHH28_RS16220 6563acddbce7b86fa7fa728f363fd45b 300 Gene3D G3DSA:3.40.190.10 178 271 2.5E-7 T 29-03-2018 CHH28_RS16220 6563acddbce7b86fa7fa728f363fd45b 300 Gene3D G3DSA:1.10.10.10 4 96 1.1E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS16220 6563acddbce7b86fa7fa728f363fd45b 300 Gene3D G3DSA:3.40.190.10 97 177 0.0012 T 29-03-2018 CHH28_RS16220 6563acddbce7b86fa7fa728f363fd45b 300 SUPERFAMILY SSF53850 92 294 7.87E-23 T 29-03-2018 CHH28_RS16220 6563acddbce7b86fa7fa728f363fd45b 300 SUPERFAMILY SSF46785 5 88 7.37E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS16220 6563acddbce7b86fa7fa728f363fd45b 300 Pfam PF03466 LysR substrate binding domain 94 295 4.2E-16 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS16220 6563acddbce7b86fa7fa728f363fd45b 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.9E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS10495 ed8ca4648afd93df65d36d17e3153473 359 SUPERFAMILY SSF51395 3 357 2.87E-113 T 29-03-2018 CHH28_RS10495 ed8ca4648afd93df65d36d17e3153473 359 Gene3D G3DSA:3.20.20.70 1 359 1.6E-119 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS10495 ed8ca4648afd93df65d36d17e3153473 359 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 335 7.3E-83 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CHH28_RS08175 048d4810e26b3d779fa2b0252507c6b8 879 Gene3D G3DSA:3.40.50.300 31 201 3.6E-9 T 29-03-2018 CHH28_RS08175 048d4810e26b3d779fa2b0252507c6b8 879 SMART SM00421 816 873 8.1E-23 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS08175 048d4810e26b3d779fa2b0252507c6b8 879 Gene3D G3DSA:1.10.10.10 808 879 2.3E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS08175 048d4810e26b3d779fa2b0252507c6b8 879 Pfam PF00196 Bacterial regulatory proteins, luxR family 818 873 1.6E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS08175 048d4810e26b3d779fa2b0252507c6b8 879 SUPERFAMILY SSF46894 810 876 3.74E-20 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CHH28_RS08175 048d4810e26b3d779fa2b0252507c6b8 879 SUPERFAMILY SSF48452 464 675 1.9E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS08175 048d4810e26b3d779fa2b0252507c6b8 879 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 849 861 9.7E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS08175 048d4810e26b3d779fa2b0252507c6b8 879 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 833 849 9.7E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS08175 048d4810e26b3d779fa2b0252507c6b8 879 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 819 833 9.7E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS08175 048d4810e26b3d779fa2b0252507c6b8 879 Gene3D G3DSA:1.25.40.10 462 793 7.9E-16 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS08175 048d4810e26b3d779fa2b0252507c6b8 879 SUPERFAMILY SSF52540 56 259 9.32E-10 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS02055 0809b51217b46575860145316a02e76d 477 Gene3D G3DSA:3.20.20.70 145 449 2.4E-160 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS02055 0809b51217b46575860145316a02e76d 477 Gene3D G3DSA:2.30.170.30 3 55 1.9E-22 T 29-03-2018 CHH28_RS02055 0809b51217b46575860145316a02e76d 477 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 14 442 1.1E-219 T 29-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CHH28_RS02055 0809b51217b46575860145316a02e76d 477 Gene3D G3DSA:1.10.220.70 58 142 3.1E-40 T 29-03-2018 CHH28_RS02055 0809b51217b46575860145316a02e76d 477 PIRSF PIRSF018788 3 460 2.5E-233 T 29-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CHH28_RS08730 d45867470bd2dc01f13cb2b927741f86 431 PRINTS PR00148 Enolase signature 107 123 1.3E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS08730 d45867470bd2dc01f13cb2b927741f86 431 PRINTS PR00148 Enolase signature 367 384 1.3E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS08730 d45867470bd2dc01f13cb2b927741f86 431 PRINTS PR00148 Enolase signature 165 178 1.3E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS08730 d45867470bd2dc01f13cb2b927741f86 431 PRINTS PR00148 Enolase signature 338 352 1.3E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS08730 d45867470bd2dc01f13cb2b927741f86 431 PRINTS PR00148 Enolase signature 315 326 1.3E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS08730 d45867470bd2dc01f13cb2b927741f86 431 PRINTS PR00148 Enolase signature 37 51 1.3E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS08730 d45867470bd2dc01f13cb2b927741f86 431 SUPERFAMILY SSF54826 4 138 1.21E-56 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS08730 d45867470bd2dc01f13cb2b927741f86 431 Hamap MF_00318 Enolase [eno]. 2 415 44.11 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS08730 d45867470bd2dc01f13cb2b927741f86 431 SMART SM01192 143 429 9.6E-221 T 29-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS08730 d45867470bd2dc01f13cb2b927741f86 431 SMART SM01193 4 134 2.3E-93 T 29-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS08730 d45867470bd2dc01f13cb2b927741f86 431 Gene3D G3DSA:3.30.390.10 3 127 4.3E-53 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS08730 d45867470bd2dc01f13cb2b927741f86 431 PIRSF PIRSF001400 1 429 1.5E-192 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS08730 d45867470bd2dc01f13cb2b927741f86 431 Gene3D G3DSA:3.20.20.120 128 430 7.8E-101 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CHH28_RS08730 d45867470bd2dc01f13cb2b927741f86 431 SUPERFAMILY SSF51604 143 427 2.69E-128 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CHH28_RS08730 d45867470bd2dc01f13cb2b927741f86 431 Pfam PF03952 Enolase, N-terminal domain 4 134 1.3E-58 T 29-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS08730 d45867470bd2dc01f13cb2b927741f86 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 428 1.0E-137 T 29-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS08730 d45867470bd2dc01f13cb2b927741f86 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 6.1E-206 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS08730 d45867470bd2dc01f13cb2b927741f86 431 ProSitePatterns PS00164 Enolase signature. 338 351 - T 29-03-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS15600 af1b60f326ab600f4f6af58aae281d45 502 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 468 2.0E-132 T 29-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CHH28_RS15600 af1b60f326ab600f4f6af58aae281d45 502 SUPERFAMILY SSF52374 3 307 2.6E-109 T 29-03-2018 CHH28_RS15600 af1b60f326ab600f4f6af58aae281d45 502 SUPERFAMILY SSF48163 313 470 1.96E-29 T 29-03-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CHH28_RS15600 af1b60f326ab600f4f6af58aae281d45 502 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 319 2.3E-106 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CHH28_RS15600 af1b60f326ab600f4f6af58aae281d45 502 Gene3D G3DSA:1.10.10.350 376 485 6.2E-16 T 29-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CHH28_RS15600 af1b60f326ab600f4f6af58aae281d45 502 Gene3D G3DSA:3.40.50.620 131 243 1.7E-24 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS15600 af1b60f326ab600f4f6af58aae281d45 502 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS15600 af1b60f326ab600f4f6af58aae281d45 502 Gene3D G3DSA:1.10.1160.10 245 329 9.5E-32 T 29-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CHH28_RS15600 af1b60f326ab600f4f6af58aae281d45 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 7.4E-23 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CHH28_RS15600 af1b60f326ab600f4f6af58aae281d45 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 7.4E-23 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CHH28_RS15600 af1b60f326ab600f4f6af58aae281d45 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 7.4E-23 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CHH28_RS15600 af1b60f326ab600f4f6af58aae281d45 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 202 7.4E-23 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CHH28_RS15600 af1b60f326ab600f4f6af58aae281d45 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 216 7.4E-23 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CHH28_RS15600 af1b60f326ab600f4f6af58aae281d45 502 Gene3D G3DSA:3.40.50.620 3 130 4.4E-33 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS15600 af1b60f326ab600f4f6af58aae281d45 502 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 470 29.207 T 29-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CHH28_RS12000 5e9df54728821308d4956b977ee7766b 477 SUPERFAMILY SSF55347 287 450 2.71E-58 T 29-03-2018 CHH28_RS12000 5e9df54728821308d4956b977ee7766b 477 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 127 237 1.2E-21 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS12000 5e9df54728821308d4956b977ee7766b 477 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 285 292 - T 29-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS12000 5e9df54728821308d4956b977ee7766b 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 364 381 6.6E-19 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS12000 5e9df54728821308d4956b977ee7766b 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 308 324 6.6E-19 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS12000 5e9df54728821308d4956b977ee7766b 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 406 421 6.6E-19 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS12000 5e9df54728821308d4956b977ee7766b 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 281 299 6.6E-19 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS12000 5e9df54728821308d4956b977ee7766b 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 245 258 6.6E-19 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS12000 5e9df54728821308d4956b977ee7766b 477 SMART SM00846 126 287 2.4E-52 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS12000 5e9df54728821308d4956b977ee7766b 477 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 128 461 2.4E-114 T 29-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS12000 5e9df54728821308d4956b977ee7766b 477 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 292 449 5.6E-52 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CHH28_RS12000 5e9df54728821308d4956b977ee7766b 477 Gene3D G3DSA:3.30.360.10 295 451 2.3E-54 T 29-03-2018 CHH28_RS12000 5e9df54728821308d4956b977ee7766b 477 SUPERFAMILY SSF51735 127 303 6.3E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS12000 5e9df54728821308d4956b977ee7766b 477 Gene3D G3DSA:3.40.50.720 125 294 1.2E-47 T 29-03-2018 CHH28_RS15675 3606a585a7d11bac48e68d6f73a9208b 316 PIRSF PIRSF002867 1 308 2.5E-101 T 29-03-2018 IPR024181 Chemotaxis response regulator CheV CHH28_RS15675 3606a585a7d11bac48e68d6f73a9208b 316 SUPERFAMILY SSF50341 16 159 6.02E-36 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS15675 3606a585a7d11bac48e68d6f73a9208b 316 SMART SM00260 17 154 4.0E-24 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS15675 3606a585a7d11bac48e68d6f73a9208b 316 Pfam PF00072 Response regulator receiver domain 182 300 4.9E-18 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS15675 3606a585a7d11bac48e68d6f73a9208b 316 Gene3D G3DSA:3.40.50.2300 174 315 5.7E-22 T 29-03-2018 CHH28_RS15675 3606a585a7d11bac48e68d6f73a9208b 316 Gene3D G3DSA:2.30.30.40 106 148 7.2E-12 T 29-03-2018 CHH28_RS15675 3606a585a7d11bac48e68d6f73a9208b 316 Pfam PF01584 CheW-like domain 21 156 6.2E-35 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS15675 3606a585a7d11bac48e68d6f73a9208b 316 SUPERFAMILY SSF52172 178 307 2.42E-23 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS15675 3606a585a7d11bac48e68d6f73a9208b 316 Gene3D G3DSA:2.40.50.180 39 105 2.8E-15 T 29-03-2018 CHH28_RS15675 3606a585a7d11bac48e68d6f73a9208b 316 SMART SM00448 180 301 6.9E-15 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS03335 fe5b6e64d8685c4f211f1a588263eb48 192 Gene3D G3DSA:3.40.50.10420 1 192 2.3E-53 T 29-03-2018 CHH28_RS03335 fe5b6e64d8685c4f211f1a588263eb48 192 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 3 186 9.3E-39 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CHH28_RS03335 fe5b6e64d8685c4f211f1a588263eb48 192 PIRSF PIRSF006806 1 189 4.8E-35 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CHH28_RS03335 fe5b6e64d8685c4f211f1a588263eb48 192 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 186 1.3E-47 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CHH28_RS03335 fe5b6e64d8685c4f211f1a588263eb48 192 SUPERFAMILY SSF100950 1 192 2.37E-52 T 29-03-2018 CHH28_RS16440 361e2b2e500076058b424df3f035d3cb 1886 Gene3D G3DSA:4.10.1080.10 379 537 1.4E-6 T 29-03-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 CHH28_RS16440 361e2b2e500076058b424df3f035d3cb 1886 Gene3D G3DSA:4.10.1080.10 915 1030 0.0012 T 29-03-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 CHH28_RS16440 361e2b2e500076058b424df3f035d3cb 1886 Gene3D G3DSA:2.60.40.10 1208 1297 0.017 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS16440 361e2b2e500076058b424df3f035d3cb 1886 Gene3D G3DSA:2.60.40.10 1031 1114 1.1E-7 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS16440 361e2b2e500076058b424df3f035d3cb 1886 Gene3D G3DSA:2.60.40.10 538 618 0.0011 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS16440 361e2b2e500076058b424df3f035d3cb 1886 Gene3D G3DSA:2.60.130.10 1578 1811 0.064 T 29-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CHH28_RS00330 23dd241098c8bb66bb25beb7b3af82b4 485 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 19 472 7.1E-128 T 29-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CHH28_RS00330 23dd241098c8bb66bb25beb7b3af82b4 485 Gene3D G3DSA:3.40.1390.10 1 81 3.0E-13 T 29-03-2018 CHH28_RS00330 23dd241098c8bb66bb25beb7b3af82b4 485 SUPERFAMILY SSF53244 324 472 2.75E-37 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CHH28_RS00330 23dd241098c8bb66bb25beb7b3af82b4 485 Gene3D G3DSA:3.90.190.20 328 474 2.9E-38 T 29-03-2018 CHH28_RS00330 23dd241098c8bb66bb25beb7b3af82b4 485 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 474 28.08 T 29-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CHH28_RS00330 23dd241098c8bb66bb25beb7b3af82b4 485 SUPERFAMILY SSF53623 100 323 6.54E-65 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CHH28_RS00330 23dd241098c8bb66bb25beb7b3af82b4 485 Pfam PF01225 Mur ligase family, catalytic domain 22 65 2.1E-4 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CHH28_RS00330 23dd241098c8bb66bb25beb7b3af82b4 485 SUPERFAMILY SSF63418 2 83 1.07E-13 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CHH28_RS00330 23dd241098c8bb66bb25beb7b3af82b4 485 Gene3D G3DSA:3.40.1190.10 98 327 1.0E-48 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CHH28_RS00330 23dd241098c8bb66bb25beb7b3af82b4 485 Pfam PF02875 Mur ligase family, glutamate ligase domain 324 407 1.3E-15 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CHH28_RS00330 23dd241098c8bb66bb25beb7b3af82b4 485 Pfam PF08245 Mur ligase middle domain 106 303 1.0E-42 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CHH28_RS01685 718f4cdf2227a39df9e479b079f06d0f 180 Pfam PF04350 Pilus assembly protein, PilO 37 176 6.4E-48 T 29-03-2018 IPR007445 Pilus assembly protein, PilO CHH28_RS01685 718f4cdf2227a39df9e479b079f06d0f 180 Gene3D G3DSA:3.30.70.60 81 180 2.3E-22 T 29-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CHH28_RS01685 718f4cdf2227a39df9e479b079f06d0f 180 Gene3D G3DSA:1.10.287.540 45 80 1.6E-16 T 29-03-2018 CHH28_RS01685 718f4cdf2227a39df9e479b079f06d0f 180 PIRSF PIRSF016482 1 180 5.4E-57 T 29-03-2018 IPR007445 Pilus assembly protein, PilO CHH28_RS07800 0ea828318fbe10c3fb0f89d7a9a085b2 324 Pfam PF01636 Phosphotransferase enzyme family 35 252 1.2E-37 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CHH28_RS07800 0ea828318fbe10c3fb0f89d7a9a085b2 324 Gene3D G3DSA:3.90.1200.10 110 321 2.2E-21 T 29-03-2018 CHH28_RS07800 0ea828318fbe10c3fb0f89d7a9a085b2 324 SUPERFAMILY SSF56112 7 321 3.4E-74 T 29-03-2018 IPR011009 Protein kinase-like domain CHH28_RS07800 0ea828318fbe10c3fb0f89d7a9a085b2 324 Hamap MF_01497 Stress response kinase A [srkA]. 4 317 44.824 T 29-03-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 CHH28_RS07800 0ea828318fbe10c3fb0f89d7a9a085b2 324 Gene3D G3DSA:3.30.200.20 6 107 1.8E-18 T 29-03-2018 CHH28_RS05820 1cb6c20a68308d99d69b3d1c20b333ed 115 SUPERFAMILY SSF89360 8 101 1.67E-28 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CHH28_RS05820 1cb6c20a68308d99d69b3d1c20b333ed 115 Gene3D G3DSA:2.60.300.12 10 115 1.2E-36 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CHH28_RS05820 1cb6c20a68308d99d69b3d1c20b333ed 115 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 115 32.26 T 29-03-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 CHH28_RS05820 1cb6c20a68308d99d69b3d1c20b333ed 115 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 96 113 - T 29-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CHH28_RS05820 1cb6c20a68308d99d69b3d1c20b333ed 115 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 11 114 2.0E-36 T 29-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CHH28_RS05820 1cb6c20a68308d99d69b3d1c20b333ed 115 Pfam PF01521 Iron-sulphur cluster biosynthesis 11 110 1.6E-19 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CHH28_RS16065 c5835010e86ad9a53ff69f2867688b36 223 SUPERFAMILY SSF51366 4 218 6.85E-76 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CHH28_RS16065 c5835010e86ad9a53ff69f2867688b36 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 5.2E-98 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CHH28_RS16065 c5835010e86ad9a53ff69f2867688b36 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CHH28_RS16065 c5835010e86ad9a53ff69f2867688b36 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.1E-90 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CHH28_RS16065 c5835010e86ad9a53ff69f2867688b36 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CHH28_RS16065 c5835010e86ad9a53ff69f2867688b36 223 PIRSF PIRSF001461 1 222 7.6E-104 T 29-03-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CHH28_RS16065 c5835010e86ad9a53ff69f2867688b36 223 Gene3D G3DSA:3.20.20.70 1 220 2.7E-87 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS16880 9c22ab7688923afe5ffa334c3ff94d88 458 SMART SM00729 52 274 6.8E-47 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CHH28_RS16880 9c22ab7688923afe5ffa334c3ff94d88 458 Pfam PF06969 HemN C-terminal domain 366 433 9.3E-7 T 29-03-2018 IPR010723 HemN, C-terminal CHH28_RS16880 9c22ab7688923afe5ffa334c3ff94d88 458 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 458 3.5E-179 T 29-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 CHH28_RS16880 9c22ab7688923afe5ffa334c3ff94d88 458 Pfam PF04055 Radical SAM superfamily 57 229 8.0E-18 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CHH28_RS16880 9c22ab7688923afe5ffa334c3ff94d88 458 SUPERFAMILY SSF102114 6 446 2.75E-131 T 29-03-2018 CHH28_RS16880 9c22ab7688923afe5ffa334c3ff94d88 458 PIRSF PIRSF000167 3 458 7.0E-168 T 29-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 CHH28_RS16880 9c22ab7688923afe5ffa334c3ff94d88 458 Gene3D G3DSA:3.20.20.70 26 355 1.7E-48 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS15885 ef49e6e3a746c67a80d12e0a59683596 271 PRINTS PR00412 Epoxide hydrolase signature 32 50 4.0E-7 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CHH28_RS15885 ef49e6e3a746c67a80d12e0a59683596 271 PRINTS PR00412 Epoxide hydrolase signature 247 269 4.0E-7 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CHH28_RS15885 ef49e6e3a746c67a80d12e0a59683596 271 PRINTS PR00412 Epoxide hydrolase signature 95 108 4.0E-7 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CHH28_RS15885 ef49e6e3a746c67a80d12e0a59683596 271 Gene3D G3DSA:3.40.50.1820 4 271 8.0E-47 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS15885 ef49e6e3a746c67a80d12e0a59683596 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 230 3.6E-10 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS15885 ef49e6e3a746c67a80d12e0a59683596 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 3.6E-10 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS15885 ef49e6e3a746c67a80d12e0a59683596 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 3.6E-10 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS15885 ef49e6e3a746c67a80d12e0a59683596 271 Pfam PF12697 Alpha/beta hydrolase family 28 264 7.5E-22 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS15885 ef49e6e3a746c67a80d12e0a59683596 271 SUPERFAMILY SSF53474 8 270 1.8E-56 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS08050 f9844a5eaec6a7f27f96306d27c88ced 454 Gene3D G3DSA:3.40.50.720 1 90 6.3E-12 T 29-03-2018 CHH28_RS08050 f9844a5eaec6a7f27f96306d27c88ced 454 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 448 54.725 T 29-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 CHH28_RS08050 f9844a5eaec6a7f27f96306d27c88ced 454 Gene3D G3DSA:3.90.190.20 314 454 3.8E-22 T 29-03-2018 CHH28_RS08050 f9844a5eaec6a7f27f96306d27c88ced 454 Pfam PF01225 Mur ligase family, catalytic domain 2 98 2.2E-14 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CHH28_RS08050 f9844a5eaec6a7f27f96306d27c88ced 454 Pfam PF08245 Mur ligase middle domain 108 291 4.3E-21 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CHH28_RS08050 f9844a5eaec6a7f27f96306d27c88ced 454 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 448 3.3E-191 T 29-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 CHH28_RS08050 f9844a5eaec6a7f27f96306d27c88ced 454 SUPERFAMILY SSF51984 1 89 1.23E-21 T 29-03-2018 CHH28_RS08050 f9844a5eaec6a7f27f96306d27c88ced 454 Gene3D G3DSA:3.40.1190.10 91 313 9.7E-45 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CHH28_RS08050 f9844a5eaec6a7f27f96306d27c88ced 454 SUPERFAMILY SSF53623 95 309 5.76E-53 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CHH28_RS08050 f9844a5eaec6a7f27f96306d27c88ced 454 SUPERFAMILY SSF53244 311 447 3.53E-30 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CHH28_RS08050 f9844a5eaec6a7f27f96306d27c88ced 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 362 1.2E-8 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CHH28_RS16060 1ddeafd7b34fa8d9a41f695bd4a6c455 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 89 194 4.3E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS16060 1ddeafd7b34fa8d9a41f695bd4a6c455 229 Gene3D G3DSA:3.40.50.1000 94 229 1.3E-34 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS16060 1ddeafd7b34fa8d9a41f695bd4a6c455 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 89 197 1.3E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS16060 1ddeafd7b34fa8d9a41f695bd4a6c455 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 145 161 1.2E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS16060 1ddeafd7b34fa8d9a41f695bd4a6c455 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 163 183 1.2E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS16060 1ddeafd7b34fa8d9a41f695bd4a6c455 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 14 25 1.2E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS16060 1ddeafd7b34fa8d9a41f695bd4a6c455 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 114 127 1.2E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS16060 1ddeafd7b34fa8d9a41f695bd4a6c455 229 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 17 228 6.5E-68 T 29-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CHH28_RS16060 1ddeafd7b34fa8d9a41f695bd4a6c455 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 17 201 7.4E-33 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS16060 1ddeafd7b34fa8d9a41f695bd4a6c455 229 Gene3D G3DSA:1.10.150.240 29 93 7.6E-20 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CHH28_RS16060 1ddeafd7b34fa8d9a41f695bd4a6c455 229 SUPERFAMILY SSF56784 15 228 6.49E-56 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS17100 eb09a9002f6c991a6848759dcaa49287 201 Gene3D G3DSA:1.10.760.10 34 201 1.6E-26 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS17100 eb09a9002f6c991a6848759dcaa49287 201 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 6 178 2.7E-80 T 29-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CHH28_RS17100 eb09a9002f6c991a6848759dcaa49287 201 SUPERFAMILY SSF46626 13 195 3.07E-29 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS17100 eb09a9002f6c991a6848759dcaa49287 201 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 179 2.5E-81 T 29-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CHH28_RS12315 60676151224d1c2cd9a8ee3b01429072 309 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 279 1.3E-57 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CHH28_RS12315 60676151224d1c2cd9a8ee3b01429072 309 Gene3D G3DSA:3.40.190.10 152 309 1.7E-34 T 29-03-2018 CHH28_RS12315 60676151224d1c2cd9a8ee3b01429072 309 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 19 306 9.9E-145 T 29-03-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 CHH28_RS12315 60676151224d1c2cd9a8ee3b01429072 309 Gene3D G3DSA:3.40.190.10 18 151 1.2E-18 T 29-03-2018 CHH28_RS12315 60676151224d1c2cd9a8ee3b01429072 309 SUPERFAMILY SSF53850 22 296 1.32E-86 T 29-03-2018 CHH28_RS13115 12bcafb253b67e2f1cbd749bd692586e 152 PIRSF PIRSF000714 1 143 4.7E-48 T 29-03-2018 IPR026026 Histidine triad hydrolase, Hint-type CHH28_RS13115 12bcafb253b67e2f1cbd749bd692586e 152 SUPERFAMILY SSF54197 8 133 6.8E-30 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CHH28_RS13115 12bcafb253b67e2f1cbd749bd692586e 152 Pfam PF01230 HIT domain 9 98 5.6E-12 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CHH28_RS13115 12bcafb253b67e2f1cbd749bd692586e 152 Gene3D G3DSA:3.30.428.10 1 135 1.7E-18 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CHH28_RS16525 447bcdbf25f7361424fd9c533a308d96 180 SUPERFAMILY SSF53271 9 177 1.23E-50 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CHH28_RS16525 447bcdbf25f7361424fd9c533a308d96 180 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 176 2.1E-66 T 29-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CHH28_RS16525 447bcdbf25f7361424fd9c533a308d96 180 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 8 177 35.96 T 29-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CHH28_RS16525 447bcdbf25f7361424fd9c533a308d96 180 Pfam PF00156 Phosphoribosyl transferase domain 39 157 8.5E-16 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CHH28_RS16525 447bcdbf25f7361424fd9c533a308d96 180 Gene3D G3DSA:3.40.50.2020 1 180 2.6E-43 T 29-03-2018 CHH28_RS00235 eccdee697adf603f2181794de77b7391 287 SUPERFAMILY SSF56176 199 284 3.54E-21 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CHH28_RS00235 eccdee697adf603f2181794de77b7391 287 Gene3D G3DSA:3.30.465.10 192 279 1.4E-21 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CHH28_RS00235 eccdee697adf603f2181794de77b7391 287 SUPERFAMILY SSF54631 53 193 2.15E-33 T 29-03-2018 CHH28_RS00235 eccdee697adf603f2181794de77b7391 287 SMART SM00116 136 184 0.23 T 29-03-2018 IPR000644 CBS domain CHH28_RS00235 eccdee697adf603f2181794de77b7391 287 SMART SM00116 72 121 0.012 T 29-03-2018 IPR000644 CBS domain CHH28_RS00235 eccdee697adf603f2181794de77b7391 287 Gene3D G3DSA:3.10.580.10 42 191 2.2E-35 T 29-03-2018 CHH28_RS00235 eccdee697adf603f2181794de77b7391 287 SMART SM01091 201 279 2.7E-21 T 29-03-2018 IPR005170 Transporter-associated domain CHH28_RS00235 eccdee697adf603f2181794de77b7391 287 Pfam PF00571 CBS domain 63 117 3.9E-7 T 29-03-2018 IPR000644 CBS domain CHH28_RS00235 eccdee697adf603f2181794de77b7391 287 Pfam PF00571 CBS domain 135 184 1.0E-4 T 29-03-2018 IPR000644 CBS domain CHH28_RS00235 eccdee697adf603f2181794de77b7391 287 Pfam PF03471 Transporter associated domain 203 276 9.6E-18 T 29-03-2018 IPR005170 Transporter-associated domain CHH28_RS08015 0bc38315e0826b07af27d6c839834918 305 Gene3D G3DSA:3.40.50.280 182 301 1.9E-4 T 29-03-2018 CHH28_RS08015 0bc38315e0826b07af27d6c839834918 305 Gene3D G3DSA:1.10.1660.10 3 128 2.2E-23 T 29-03-2018 CHH28_RS08015 0bc38315e0826b07af27d6c839834918 305 SUPERFAMILY SSF46955 13 110 2.7E-18 T 29-03-2018 IPR009061 Putative DNA-binding domain CHH28_RS08015 0bc38315e0826b07af27d6c839834918 305 SMART SM00422 13 82 6.4E-18 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS08015 0bc38315e0826b07af27d6c839834918 305 Pfam PF13411 MerR HTH family regulatory protein 13 81 1.4E-18 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS02205 2fd7b0331c8127346f93d5e65f60caec 122 Gene3D G3DSA:1.10.490.10 3 121 1.1E-36 T 29-03-2018 CHH28_RS02205 2fd7b0331c8127346f93d5e65f60caec 122 Pfam PF01152 Bacterial-like globin 3 116 3.2E-17 T 29-03-2018 IPR001486 Truncated hemoglobin GO:0019825 CHH28_RS02205 2fd7b0331c8127346f93d5e65f60caec 122 PIRSF PIRSF002030 1 122 1.2E-45 T 29-03-2018 IPR016339 Truncated hemoglobin, group 1 CHH28_RS02205 2fd7b0331c8127346f93d5e65f60caec 122 SUPERFAMILY SSF46458 2 119 1.3E-34 T 29-03-2018 IPR009050 Globin-like CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 SUPERFAMILY SSF55424 354 464 6.7E-24 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 Gene3D G3DSA:3.50.50.60 118 239 4.8E-18 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 Gene3D G3DSA:3.50.50.60 240 331 6.0E-6 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 461 4.6E-16 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 SUPERFAMILY SSF51905 6 372 2.44E-42 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 Gene3D G3DSA:3.40.50.720 2 51 0.24 T 29-03-2018 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 PIRSF PIRSF000350 2 470 5.1E-66 T 29-03-2018 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 5.2E-16 T 29-03-2018 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 5.2E-16 T 29-03-2018 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.2E-16 T 29-03-2018 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 5.2E-16 T 29-03-2018 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 326 6.8E-41 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 Gene3D G3DSA:1.10.287.990 52 104 1.2E-16 T 29-03-2018 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 347 368 8.6E-39 T 29-03-2018 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 8.6E-39 T 29-03-2018 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 8.6E-39 T 29-03-2018 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 8.6E-39 T 29-03-2018 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 8.6E-39 T 29-03-2018 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 8.6E-39 T 29-03-2018 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 8.6E-39 T 29-03-2018 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 8.6E-39 T 29-03-2018 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.6E-39 T 29-03-2018 CHH28_RS08070 5b0d6c412e933e0ed78d7aecba906b83 486 Gene3D G3DSA:3.30.390.30 353 476 1.3E-23 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CHH28_RS04870 611d284a428e0baa40b8bec5256e21c9 590 Gene3D G3DSA:1.25.40.10 186 485 4.0E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS04870 611d284a428e0baa40b8bec5256e21c9 590 SUPERFAMILY SSF48452 48 109 1.78E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS04870 611d284a428e0baa40b8bec5256e21c9 590 SUPERFAMILY SSF48452 226 259 1.78E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS04870 611d284a428e0baa40b8bec5256e21c9 590 Gene3D G3DSA:1.25.40.10 45 168 6.3E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS19485 0e3f5e92529e72989628525abb0aefd0 90 SUPERFAMILY SSF117991 3 90 5.49E-21 T 29-03-2018 IPR027471 YbeD-like domain CHH28_RS19485 0e3f5e92529e72989628525abb0aefd0 90 Pfam PF04359 Protein of unknown function (DUF493) 7 90 4.5E-23 T 29-03-2018 IPR007454 Uncharacterised protein family UPF0250 CHH28_RS19485 0e3f5e92529e72989628525abb0aefd0 90 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 5 90 19.84 T 29-03-2018 IPR007454 Uncharacterised protein family UPF0250 CHH28_RS19485 0e3f5e92529e72989628525abb0aefd0 90 Gene3D G3DSA:3.30.70.260 5 90 1.8E-21 T 29-03-2018 CHH28_RS08190 a9e95203ddb445785b59c13eee33c2fd 322 SUPERFAMILY SSF46785 5 119 7.57E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS08190 a9e95203ddb445785b59c13eee33c2fd 322 Pfam PF03466 LysR substrate binding domain 96 296 5.4E-49 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS08190 a9e95203ddb445785b59c13eee33c2fd 322 Gene3D G3DSA:3.40.190.10 183 268 6.2E-25 T 29-03-2018 CHH28_RS08190 a9e95203ddb445785b59c13eee33c2fd 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 7.0E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS08190 a9e95203ddb445785b59c13eee33c2fd 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 7.0E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS08190 a9e95203ddb445785b59c13eee33c2fd 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 7.0E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS08190 a9e95203ddb445785b59c13eee33c2fd 322 Gene3D G3DSA:3.40.190.10 99 182 9.7E-13 T 29-03-2018 CHH28_RS08190 a9e95203ddb445785b59c13eee33c2fd 322 Gene3D G3DSA:1.10.10.10 4 91 2.4E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS08190 a9e95203ddb445785b59c13eee33c2fd 322 SUPERFAMILY SSF53850 97 300 7.76E-52 T 29-03-2018 CHH28_RS08190 a9e95203ddb445785b59c13eee33c2fd 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 1.4E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS07870 1c5e7b70eb79cfa29ca6eadafe5a19e8 268 SUPERFAMILY SSF51366 4 265 8.83E-86 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CHH28_RS07870 1c5e7b70eb79cfa29ca6eadafe5a19e8 268 Gene3D G3DSA:3.20.20.70 13 267 1.8E-71 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS07870 1c5e7b70eb79cfa29ca6eadafe5a19e8 268 Pfam PF00218 Indole-3-glycerol phosphate synthase 7 264 1.3E-97 T 29-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CHH28_RS07870 1c5e7b70eb79cfa29ca6eadafe5a19e8 268 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 5 266 35.888 T 29-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CHH28_RS07870 1c5e7b70eb79cfa29ca6eadafe5a19e8 268 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 60 78 - T 29-03-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 CHH28_RS04780 a07fcb574689effbb08c7cec7e8ece1d 693 Pfam PF00270 DEAD/DEAH box helicase 294 432 6.6E-18 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CHH28_RS04780 a07fcb574689effbb08c7cec7e8ece1d 693 SMART SM00487 266 460 3.6E-30 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CHH28_RS04780 a07fcb574689effbb08c7cec7e8ece1d 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 25 664 2.2E-225 T 29-03-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 CHH28_RS04780 a07fcb574689effbb08c7cec7e8ece1d 693 Pfam PF00271 Helicase conserved C-terminal domain 481 588 2.0E-16 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS04780 a07fcb574689effbb08c7cec7e8ece1d 693 SUPERFAMILY SSF50249 4 171 2.06E-32 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS04780 a07fcb574689effbb08c7cec7e8ece1d 693 SUPERFAMILY SSF52540 508 651 6.89E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS04780 a07fcb574689effbb08c7cec7e8ece1d 693 SUPERFAMILY SSF52540 293 343 6.89E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS04780 a07fcb574689effbb08c7cec7e8ece1d 693 Gene3D G3DSA:2.40.50.140 44 141 1.8E-10 T 29-03-2018 CHH28_RS04780 a07fcb574689effbb08c7cec7e8ece1d 693 SUPERFAMILY SSF52540 180 454 1.44E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS04780 a07fcb574689effbb08c7cec7e8ece1d 693 Pfam PF17191 RecG wedge domain 11 168 2.3E-13 T 29-03-2018 IPR033454 RecG, wedge domain CHH28_RS04780 a07fcb574689effbb08c7cec7e8ece1d 693 Gene3D G3DSA:1.10.150.20 5 38 1.4E-4 T 29-03-2018 CHH28_RS04780 a07fcb574689effbb08c7cec7e8ece1d 693 Gene3D G3DSA:3.40.50.300 458 630 1.4E-28 T 29-03-2018 CHH28_RS04780 a07fcb574689effbb08c7cec7e8ece1d 693 SMART SM00490 505 589 1.2E-19 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS04780 a07fcb574689effbb08c7cec7e8ece1d 693 Gene3D G3DSA:3.40.50.300 251 457 4.7E-36 T 29-03-2018 CHH28_RS03895 55a6559f8a66c077e831ba10c316fe38 144 Gene3D G3DSA:3.40.80.10 1 144 4.9E-32 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CHH28_RS03895 55a6559f8a66c077e831ba10c316fe38 144 SMART SM00644 1 129 6.1E-4 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CHH28_RS03895 55a6559f8a66c077e831ba10c316fe38 144 SUPERFAMILY SSF55846 2 140 8.38E-33 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CHH28_RS03895 55a6559f8a66c077e831ba10c316fe38 144 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 2 129 8.6E-20 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CHH28_RS03895 55a6559f8a66c077e831ba10c316fe38 144 SMART SM00701 17 123 3.7E-4 T 29-03-2018 IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria GO:0008270|GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CHH28_RS09540 a24a942b8f762624ae5171cbb0c7dbdc 381 SUPERFAMILY SSF88697 290 380 5.52E-22 T 29-03-2018 IPR015947 PUA-like domain CHH28_RS09540 a24a942b8f762624ae5171cbb0c7dbdc 381 PRINTS PR00474 Glutamate 5-kinase family signature 130 151 1.1E-54 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CHH28_RS09540 a24a942b8f762624ae5171cbb0c7dbdc 381 PRINTS PR00474 Glutamate 5-kinase family signature 222 242 1.1E-54 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CHH28_RS09540 a24a942b8f762624ae5171cbb0c7dbdc 381 PRINTS PR00474 Glutamate 5-kinase family signature 90 118 1.1E-54 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CHH28_RS09540 a24a942b8f762624ae5171cbb0c7dbdc 381 PRINTS PR00474 Glutamate 5-kinase family signature 162 189 1.1E-54 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CHH28_RS09540 a24a942b8f762624ae5171cbb0c7dbdc 381 PRINTS PR00474 Glutamate 5-kinase family signature 56 70 1.1E-54 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CHH28_RS09540 a24a942b8f762624ae5171cbb0c7dbdc 381 SMART SM00359 290 373 4.5E-15 T 29-03-2018 IPR002478 PUA domain GO:0003723 CHH28_RS09540 a24a942b8f762624ae5171cbb0c7dbdc 381 SUPERFAMILY SSF53633 20 268 2.49E-69 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CHH28_RS09540 a24a942b8f762624ae5171cbb0c7dbdc 381 TIGRFAM TIGR01027 proB: glutamate 5-kinase 20 379 2.4E-134 T 29-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CHH28_RS09540 a24a942b8f762624ae5171cbb0c7dbdc 381 ProSitePatterns PS00902 Glutamate 5-kinase signature. 220 237 - T 29-03-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CHH28_RS09540 a24a942b8f762624ae5171cbb0c7dbdc 381 PIRSF PIRSF000729 14 381 1.8E-129 T 29-03-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CHH28_RS09540 a24a942b8f762624ae5171cbb0c7dbdc 381 Gene3D G3DSA:2.30.130.10 289 380 8.6E-25 T 29-03-2018 IPR002478 PUA domain GO:0003723 CHH28_RS09540 a24a942b8f762624ae5171cbb0c7dbdc 381 Hamap MF_00456 Glutamate 5-kinase [proB]. 19 272 36.309 T 29-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CHH28_RS09540 a24a942b8f762624ae5171cbb0c7dbdc 381 Pfam PF01472 PUA domain 290 364 7.9E-20 T 29-03-2018 IPR002478 PUA domain GO:0003723 CHH28_RS09540 a24a942b8f762624ae5171cbb0c7dbdc 381 Gene3D G3DSA:3.40.1160.10 7 278 5.6E-65 T 29-03-2018 CHH28_RS09540 a24a942b8f762624ae5171cbb0c7dbdc 381 Pfam PF00696 Amino acid kinase family 20 247 3.3E-45 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 SUPERFAMILY SSF82693 40 130 3.56E-17 T 29-03-2018 CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 SUPERFAMILY SSF82714 702 786 1.44E-9 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.9E-49 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 5.9E-49 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.9E-49 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 5.9E-49 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 5.9E-49 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 5.9E-49 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 5.9E-49 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 SUPERFAMILY SSF82714 189 266 1.27E-9 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 Pfam PF00873 AcrB/AcrD/AcrF family 6 1009 5.8E-194 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 SUPERFAMILY SSF82693 271 313 4.34E-12 T 29-03-2018 CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 SUPERFAMILY SSF82693 142 184 4.34E-12 T 29-03-2018 CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 Gene3D G3DSA:3.30.2090.10 186 271 5.9E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 SUPERFAMILY SSF82866 293 494 2.62E-40 T 29-03-2018 CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 Gene3D G3DSA:1.20.1640.10 283 507 9.0E-42 T 29-03-2018 CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 Gene3D G3DSA:1.20.1640.10 800 1026 6.9E-41 T 29-03-2018 CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 Gene3D G3DSA:3.30.70.1430 40 139 2.1E-18 T 29-03-2018 CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 SUPERFAMILY SSF82866 783 1011 9.68E-45 T 29-03-2018 CHH28_RS06400 7d7227707cd59620ef58b34b17add22a 1031 Gene3D G3DSA:3.30.2090.10 701 787 1.4E-14 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS11965 7c1f6c0fb91175d2138524775bbf41e2 405 Gene3D G3DSA:2.40.110.10 136 228 5.2E-35 T 29-03-2018 CHH28_RS11965 7c1f6c0fb91175d2138524775bbf41e2 405 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 134 229 3.3E-23 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CHH28_RS11965 7c1f6c0fb91175d2138524775bbf41e2 405 Gene3D G3DSA:1.20.140.10 229 405 8.3E-43 T 29-03-2018 CHH28_RS11965 7c1f6c0fb91175d2138524775bbf41e2 405 SUPERFAMILY SSF56645 8 257 1.3E-46 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CHH28_RS11965 7c1f6c0fb91175d2138524775bbf41e2 405 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 136 148 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CHH28_RS11965 7c1f6c0fb91175d2138524775bbf41e2 405 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 245 397 5.8E-41 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS11965 7c1f6c0fb91175d2138524775bbf41e2 405 SUPERFAMILY SSF47203 244 399 7.25E-38 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS11965 7c1f6c0fb91175d2138524775bbf41e2 405 Gene3D G3DSA:1.10.540.10 1 135 5.1E-17 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS11965 7c1f6c0fb91175d2138524775bbf41e2 405 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 355 374 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CHH28_RS13300 1abfdb34c3fb48ab02c203b5bf9e9387 462 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 225 407 9.0E-39 T 29-03-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 CHH28_RS13300 1abfdb34c3fb48ab02c203b5bf9e9387 462 SUPERFAMILY SSF55073 221 408 9.73E-61 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS13300 1abfdb34c3fb48ab02c203b5bf9e9387 462 Pfam PF05230 MASE2 domain 19 106 2.3E-17 T 29-03-2018 IPR007894 MASE2 CHH28_RS13300 1abfdb34c3fb48ab02c203b5bf9e9387 462 Gene3D G3DSA:3.30.70.1230 218 415 1.1E-58 T 29-03-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 CHH28_RS13300 1abfdb34c3fb48ab02c203b5bf9e9387 462 SMART SM00044 186 397 9.9E-24 T 29-03-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 CHH28_RS05295 7b772657feec39e21a389729eb0357c8 196 Pfam PF01713 Smr domain 97 178 6.0E-18 T 29-03-2018 IPR002625 Smr domain CHH28_RS05295 7b772657feec39e21a389729eb0357c8 196 SUPERFAMILY SSF160443 94 178 1.96E-14 T 29-03-2018 IPR002625 Smr domain CHH28_RS05295 7b772657feec39e21a389729eb0357c8 196 SMART SM00463 94 178 1.4E-4 T 29-03-2018 IPR002625 Smr domain CHH28_RS11350 c647ece3c9dfba677724ba75eeb2eda7 296 Gene3D G3DSA:3.40.50.1820 18 294 6.6E-32 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS11350 c647ece3c9dfba677724ba75eeb2eda7 296 Pfam PF00561 alpha/beta hydrolase fold 44 153 2.3E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS11350 c647ece3c9dfba677724ba75eeb2eda7 296 SUPERFAMILY SSF53474 36 293 9.55E-47 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS11350 c647ece3c9dfba677724ba75eeb2eda7 296 PRINTS PR00412 Epoxide hydrolase signature 114 127 2.5E-6 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CHH28_RS11350 c647ece3c9dfba677724ba75eeb2eda7 296 PRINTS PR00412 Epoxide hydrolase signature 50 68 2.5E-6 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CHH28_RS11350 c647ece3c9dfba677724ba75eeb2eda7 296 PRINTS PR00412 Epoxide hydrolase signature 272 294 2.5E-6 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CHH28_RS15210 80c2a04efd4db6bb575595a2eae98a24 414 TIGRFAM TIGR03806 chp_HNE_0200: conserved hypothetical protein, HNE_0200 family 65 407 8.5E-101 T 29-03-2018 IPR022269 Conserved hypothetical protein CHP03806, HNE0200 family CHH28_RS15210 80c2a04efd4db6bb575595a2eae98a24 414 Gene3D G3DSA:1.10.760.10 296 405 0.016 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS15210 80c2a04efd4db6bb575595a2eae98a24 414 Gene3D G3DSA:3.40.190.10 3 295 4.5E-4 T 29-03-2018 CHH28_RS12720 76b455009ac7df556e5c7a0a38706786 404 Gene3D G3DSA:3.90.550.10 14 364 2.6E-21 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS12720 76b455009ac7df556e5c7a0a38706786 404 SUPERFAMILY SSF53448 38 402 3.49E-98 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS00670 00ba1237818734bb14a80638b66fd9a9 174 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 41 2.1E-11 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS00670 00ba1237818734bb14a80638b66fd9a9 174 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 14 30 2.1E-11 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS00670 00ba1237818734bb14a80638b66fd9a9 174 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 41 60 2.1E-11 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS00670 00ba1237818734bb14a80638b66fd9a9 174 Pfam PF01037 Lrp/AsnC ligand binding domain 85 154 1.9E-12 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CHH28_RS00670 00ba1237818734bb14a80638b66fd9a9 174 ProSitePatterns PS00519 AsnC-type HTH domain signature. 32 58 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CHH28_RS00670 00ba1237818734bb14a80638b66fd9a9 174 Gene3D G3DSA:1.10.10.10 9 64 4.6E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS00670 00ba1237818734bb14a80638b66fd9a9 174 SMART SM00344 14 123 3.4E-27 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CHH28_RS00670 00ba1237818734bb14a80638b66fd9a9 174 SUPERFAMILY SSF54909 76 163 1.88E-11 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CHH28_RS00670 00ba1237818734bb14a80638b66fd9a9 174 Gene3D G3DSA:3.30.70.920 67 164 2.3E-13 T 29-03-2018 CHH28_RS00670 00ba1237818734bb14a80638b66fd9a9 174 Pfam PF13412 Winged helix-turn-helix DNA-binding 14 61 1.4E-16 T 29-03-2018 CHH28_RS00670 00ba1237818734bb14a80638b66fd9a9 174 SUPERFAMILY SSF46785 13 72 2.77E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS12755 23c796a30c1a5d724ccda0980f138ee4 124 SMART SM00448 3 115 2.7E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS12755 23c796a30c1a5d724ccda0980f138ee4 124 SUPERFAMILY SSF52172 3 118 1.12E-27 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS12755 23c796a30c1a5d724ccda0980f138ee4 124 Gene3D G3DSA:3.40.50.2300 1 119 2.2E-27 T 29-03-2018 CHH28_RS12755 23c796a30c1a5d724ccda0980f138ee4 124 Pfam PF00072 Response regulator receiver domain 5 114 2.3E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS06550 454c417e128d2286693920c9a7ccd77f 296 Pfam PF00581 Rhodanese-like domain 169 284 8.7E-13 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS06550 454c417e128d2286693920c9a7ccd77f 296 Pfam PF00581 Rhodanese-like domain 8 126 3.3E-12 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS06550 454c417e128d2286693920c9a7ccd77f 296 SMART SM00450 168 288 1.6E-20 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS06550 454c417e128d2286693920c9a7ccd77f 296 SMART SM00450 6 130 8.4E-17 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS06550 454c417e128d2286693920c9a7ccd77f 296 SUPERFAMILY SSF52821 170 293 5.76E-37 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS06550 454c417e128d2286693920c9a7ccd77f 296 ProSitePatterns PS00683 Rhodanese C-terminal signature. 272 282 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CHH28_RS06550 454c417e128d2286693920c9a7ccd77f 296 Gene3D G3DSA:3.40.250.10 1 151 1.2E-26 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS06550 454c417e128d2286693920c9a7ccd77f 296 Gene3D G3DSA:3.40.250.10 162 296 6.6E-31 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS06550 454c417e128d2286693920c9a7ccd77f 296 SUPERFAMILY SSF52821 2 141 1.57E-34 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS05270 67607f19f112ae9608c64f931fee8370 161 Gene3D G3DSA:3.10.129.10 11 160 5.4E-27 T 29-03-2018 CHH28_RS05270 67607f19f112ae9608c64f931fee8370 161 Pfam PF03061 Thioesterase superfamily 60 151 3.2E-15 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CHH28_RS05270 67607f19f112ae9608c64f931fee8370 161 SUPERFAMILY SSF54637 17 160 3.46E-25 T 29-03-2018 IPR029069 HotDog domain CHH28_RS12415 2c207498dbd98c4a1dad82b1ce5448e9 673 SUPERFAMILY SSF58104 363 672 9.29E-66 T 29-03-2018 CHH28_RS12415 2c207498dbd98c4a1dad82b1ce5448e9 673 Gene3D G3DSA:1.20.120.230 42 429 1.7E-5 T 29-03-2018 CHH28_RS12415 2c207498dbd98c4a1dad82b1ce5448e9 673 Gene3D G3DSA:1.10.287.950 430 636 1.9E-46 T 29-03-2018 CHH28_RS12415 2c207498dbd98c4a1dad82b1ce5448e9 673 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 477 635 1.0E-39 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS12415 2c207498dbd98c4a1dad82b1ce5448e9 673 SMART SM00304 343 395 1.7E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS12415 2c207498dbd98c4a1dad82b1ce5448e9 673 Pfam PF00672 HAMP domain 349 391 1.5E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS12415 2c207498dbd98c4a1dad82b1ce5448e9 673 SMART SM00283 403 671 5.2E-57 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS09900 f6b103641edc9e04b76a02bb4ddcb882 154 Gene3D G3DSA:3.10.50.40 1 154 5.8E-26 T 29-03-2018 CHH28_RS09900 f6b103641edc9e04b76a02bb4ddcb882 154 SUPERFAMILY SSF54534 3 141 7.27E-36 T 29-03-2018 CHH28_RS09900 f6b103641edc9e04b76a02bb4ddcb882 154 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 3.0E-14 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CHH28_RS12370 3e01ba71a2f76b2c758a5520ef8c4cad 758 Pfam PF00034 Cytochrome c 44 73 1.7E-4 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS12370 3e01ba71a2f76b2c758a5520ef8c4cad 758 Gene3D G3DSA:1.10.760.10 31 616 8.7E-6 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS12370 3e01ba71a2f76b2c758a5520ef8c4cad 758 Pfam PF07627 Protein of unknown function (DUF1588) 332 417 3.9E-5 T 29-03-2018 IPR013039 Domain of unknown function DUF1588 CHH28_RS12370 3e01ba71a2f76b2c758a5520ef8c4cad 758 SUPERFAMILY SSF46626 8 110 2.26E-8 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS11395 d791d07fb2e6c1be44e1c630989b548e 184 Gene3D G3DSA:1.10.357.10 56 182 8.2E-15 T 29-03-2018 CHH28_RS11395 d791d07fb2e6c1be44e1c630989b548e 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 4.5E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS11395 d791d07fb2e6c1be44e1c630989b548e 184 Gene3D G3DSA:1.10.10.60 2 55 1.1E-15 T 29-03-2018 CHH28_RS11395 d791d07fb2e6c1be44e1c630989b548e 184 SUPERFAMILY SSF46689 3 74 4.99E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS11395 d791d07fb2e6c1be44e1c630989b548e 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.0E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS11395 d791d07fb2e6c1be44e1c630989b548e 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.0E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS17870 53ee5dcd2290883d8f96541f2c5f4c6b 313 Gene3D G3DSA:3.40.50.620 144 311 7.2E-23 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS17870 53ee5dcd2290883d8f96541f2c5f4c6b 313 Gene3D G3DSA:3.40.50.620 2 143 9.4E-15 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS17870 53ee5dcd2290883d8f96541f2c5f4c6b 313 PRINTS PR01438 Universal stress protein signature 146 164 9.3E-8 T 29-03-2018 IPR006015 Universal stress protein A CHH28_RS17870 53ee5dcd2290883d8f96541f2c5f4c6b 313 PRINTS PR01438 Universal stress protein signature 282 304 9.3E-8 T 29-03-2018 IPR006015 Universal stress protein A CHH28_RS17870 53ee5dcd2290883d8f96541f2c5f4c6b 313 PRINTS PR01438 Universal stress protein signature 264 276 9.3E-8 T 29-03-2018 IPR006015 Universal stress protein A CHH28_RS17870 53ee5dcd2290883d8f96541f2c5f4c6b 313 SUPERFAMILY SSF52402 146 309 1.09E-19 T 29-03-2018 CHH28_RS17870 53ee5dcd2290883d8f96541f2c5f4c6b 313 Pfam PF00582 Universal stress protein family 3 139 1.5E-8 T 29-03-2018 IPR006016 UspA GO:0006950 CHH28_RS17870 53ee5dcd2290883d8f96541f2c5f4c6b 313 Pfam PF00582 Universal stress protein family 146 304 3.0E-11 T 29-03-2018 IPR006016 UspA GO:0006950 CHH28_RS17870 53ee5dcd2290883d8f96541f2c5f4c6b 313 SUPERFAMILY SSF52402 1 140 5.27E-16 T 29-03-2018 CHH28_RS10210 2a343666ee6ba21790a7add226a08ebf 198 Gene3D G3DSA:1.20.58.320 1 87 1.5E-25 T 29-03-2018 CHH28_RS10210 2a343666ee6ba21790a7add226a08ebf 198 Gene3D G3DSA:1.25.40.10 88 198 8.4E-34 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS10210 2a343666ee6ba21790a7add226a08ebf 198 Pfam PF06041 Bacterial protein of unknown function (DUF924) 6 195 1.1E-61 T 29-03-2018 IPR010323 Protein of unknown function DUF924 CHH28_RS10210 2a343666ee6ba21790a7add226a08ebf 198 SUPERFAMILY SSF48452 3 194 2.47E-58 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS13790 db4a39035c14f18d2342b9866856aeb7 359 Pfam PF00246 Zinc carboxypeptidase 59 234 5.1E-14 T 29-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CHH28_RS13790 db4a39035c14f18d2342b9866856aeb7 359 ProSitePatterns PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature. 63 85 - T 29-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CHH28_RS13790 db4a39035c14f18d2342b9866856aeb7 359 SUPERFAMILY SSF53187 48 322 1.75E-44 T 29-03-2018 CHH28_RS13790 db4a39035c14f18d2342b9866856aeb7 359 Gene3D G3DSA:3.40.630.10 4 299 1.1E-35 T 29-03-2018 CHH28_RS13790 db4a39035c14f18d2342b9866856aeb7 359 SMART SM00631 1 305 0.0093 T 29-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CHH28_RS04775 faa08f44002d23f07c607673c8e444a0 464 Pfam PF04073 Aminoacyl-tRNA editing domain 40 140 1.3E-9 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CHH28_RS04775 faa08f44002d23f07c607673c8e444a0 464 SUPERFAMILY SSF109604 178 455 1.02E-64 T 29-03-2018 CHH28_RS04775 faa08f44002d23f07c607673c8e444a0 464 SUPERFAMILY SSF55826 7 144 2.75E-9 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CHH28_RS04775 faa08f44002d23f07c607673c8e444a0 464 Gene3D G3DSA:1.10.3210.10 166 440 1.2E-34 T 29-03-2018 CHH28_RS04775 faa08f44002d23f07c607673c8e444a0 464 Pfam PF08668 HDOD domain 193 393 5.8E-47 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD CHH28_RS04775 faa08f44002d23f07c607673c8e444a0 464 Gene3D G3DSA:3.90.960.10 5 148 2.5E-9 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CHH28_RS04775 faa08f44002d23f07c607673c8e444a0 464 PIRSF PIRSF036888 2 464 1.3E-137 T 29-03-2018 IPR014627 Uncharacterised conserved protein UCP036888, signal transduction HD-GYP-like, PA5346 type CHH28_RS12085 854f51af0b3ebc805bdfd3abe2729086 328 Pfam PF02779 Transketolase, pyrimidine binding domain 7 180 2.3E-48 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CHH28_RS12085 854f51af0b3ebc805bdfd3abe2729086 328 Gene3D G3DSA:3.40.50.920 198 326 4.7E-33 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CHH28_RS12085 854f51af0b3ebc805bdfd3abe2729086 328 Pfam PF02780 Transketolase, C-terminal domain 200 317 7.5E-38 T 29-03-2018 IPR033248 Transketolase, C-terminal domain CHH28_RS12085 854f51af0b3ebc805bdfd3abe2729086 328 Gene3D G3DSA:3.40.50.970 3 197 2.4E-61 T 29-03-2018 CHH28_RS12085 854f51af0b3ebc805bdfd3abe2729086 328 SUPERFAMILY SSF52518 6 190 1.52E-66 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CHH28_RS12085 854f51af0b3ebc805bdfd3abe2729086 328 SMART SM00861 6 181 3.6E-66 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CHH28_RS12085 854f51af0b3ebc805bdfd3abe2729086 328 SUPERFAMILY SSF52922 191 325 4.32E-38 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CHH28_RS12190 fe12ce9f88af474a1292161ab6763010 100 PIRSF PIRSF003113 1 95 1.2E-30 T 29-03-2018 IPR002634 BolA protein CHH28_RS12190 fe12ce9f88af474a1292161ab6763010 100 Pfam PF01722 BolA-like protein 12 81 6.0E-28 T 29-03-2018 IPR002634 BolA protein CHH28_RS12190 fe12ce9f88af474a1292161ab6763010 100 SUPERFAMILY SSF82657 1 85 1.83E-26 T 29-03-2018 IPR002634 BolA protein CHH28_RS12190 fe12ce9f88af474a1292161ab6763010 100 Gene3D G3DSA:3.30.300.90 1 88 1.4E-25 T 29-03-2018 CHH28_RS13040 480ce4bc130cd6831d0c96ee0df569da 389 PIRSF PIRSF005962 2 385 7.2E-112 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CHH28_RS13040 480ce4bc130cd6831d0c96ee0df569da 389 SUPERFAMILY SSF55031 182 289 2.36E-26 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CHH28_RS13040 480ce4bc130cd6831d0c96ee0df569da 389 Pfam PF01546 Peptidase family M20/M25/M40 71 381 9.8E-28 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CHH28_RS13040 480ce4bc130cd6831d0c96ee0df569da 389 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 14 370 3.7E-103 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CHH28_RS13040 480ce4bc130cd6831d0c96ee0df569da 389 Gene3D G3DSA:3.40.630.10 5 213 6.2E-44 T 29-03-2018 CHH28_RS13040 480ce4bc130cd6831d0c96ee0df569da 389 Gene3D G3DSA:3.40.630.10 244 386 1.8E-16 T 29-03-2018 CHH28_RS13040 480ce4bc130cd6831d0c96ee0df569da 389 SUPERFAMILY SSF53187 6 194 3.29E-77 T 29-03-2018 CHH28_RS13040 480ce4bc130cd6831d0c96ee0df569da 389 SUPERFAMILY SSF53187 295 382 3.29E-77 T 29-03-2018 CHH28_RS13040 480ce4bc130cd6831d0c96ee0df569da 389 Pfam PF07687 Peptidase dimerisation domain 179 280 8.7E-11 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CHH28_RS16840 052accd59a217a9869d5abdefdabb6ae 157 Gene3D G3DSA:2.40.50.140 27 125 4.1E-31 T 29-03-2018 CHH28_RS16840 052accd59a217a9869d5abdefdabb6ae 157 Pfam PF03100 CcmE 5 131 2.6E-44 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CHH28_RS16840 052accd59a217a9869d5abdefdabb6ae 157 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 141 32.353 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CHH28_RS16840 052accd59a217a9869d5abdefdabb6ae 157 SUPERFAMILY SSF82093 30 137 2.88E-39 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CHH28_RS13715 a663047f625a6e774aa3065cef6cf515 700 Gene3D G3DSA:3.10.560.10 577 671 4.1E-18 T 29-03-2018 CHH28_RS13715 a663047f625a6e774aa3065cef6cf515 700 Gene3D G3DSA:3.10.560.10 377 474 1.5E-14 T 29-03-2018 CHH28_RS13715 a663047f625a6e774aa3065cef6cf515 700 Gene3D G3DSA:3.10.560.10 479 576 1.2E-16 T 29-03-2018 CHH28_RS13715 a663047f625a6e774aa3065cef6cf515 700 Pfam PF02563 Polysaccharide biosynthesis/export protein 18 86 7.7E-12 T 29-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 CHH28_RS13715 a663047f625a6e774aa3065cef6cf515 700 Gene3D G3DSA:3.10.560.10 93 178 5.4E-15 T 29-03-2018 CHH28_RS13715 a663047f625a6e774aa3065cef6cf515 700 Gene3D G3DSA:3.10.560.10 284 374 1.1E-17 T 29-03-2018 CHH28_RS13715 a663047f625a6e774aa3065cef6cf515 700 Gene3D G3DSA:3.10.560.10 193 283 1.6E-15 T 29-03-2018 CHH28_RS13715 a663047f625a6e774aa3065cef6cf515 700 Gene3D G3DSA:3.30.1950.10 27 92 3.8E-11 T 29-03-2018 CHH28_RS13715 a663047f625a6e774aa3065cef6cf515 700 Pfam PF10531 SLBB domain 101 150 5.1E-5 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CHH28_RS13715 a663047f625a6e774aa3065cef6cf515 700 Pfam PF10531 SLBB domain 295 347 2.0E-12 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CHH28_RS13715 a663047f625a6e774aa3065cef6cf515 700 Pfam PF10531 SLBB domain 207 248 3.0E-7 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CHH28_RS13715 a663047f625a6e774aa3065cef6cf515 700 Pfam PF10531 SLBB domain 391 435 8.0E-8 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CHH28_RS13715 a663047f625a6e774aa3065cef6cf515 700 Pfam PF10531 SLBB domain 590 633 5.2E-10 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CHH28_RS13715 a663047f625a6e774aa3065cef6cf515 700 Pfam PF10531 SLBB domain 495 542 4.6E-5 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CHH28_RS19145 bfc33c3e53b3d5d067bb304b1cba6495 1060 Pfam PF01619 Proline dehydrogenase 197 494 6.7E-95 T 29-03-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 CHH28_RS19145 bfc33c3e53b3d5d067bb304b1cba6495 1060 Pfam PF00171 Aldehyde dehydrogenase family 579 1035 4.1E-114 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS19145 bfc33c3e53b3d5d067bb304b1cba6495 1060 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 75 187 1.8E-46 T 29-03-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CHH28_RS19145 bfc33c3e53b3d5d067bb304b1cba6495 1060 Gene3D G3DSA:3.40.605.10 554 828 2.5E-76 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS19145 bfc33c3e53b3d5d067bb304b1cba6495 1060 Gene3D G3DSA:3.40.309.10 829 1007 3.1E-47 T 29-03-2018 CHH28_RS19145 bfc33c3e53b3d5d067bb304b1cba6495 1060 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 840 851 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CHH28_RS19145 bfc33c3e53b3d5d067bb304b1cba6495 1060 SUPERFAMILY SSF51730 190 537 3.92E-107 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like CHH28_RS19145 bfc33c3e53b3d5d067bb304b1cba6495 1060 SUPERFAMILY SSF81935 20 189 1.7E-61 T 29-03-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CHH28_RS19145 bfc33c3e53b3d5d067bb304b1cba6495 1060 PIRSF PIRSF000197 5 1057 0.0 T 29-03-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CHH28_RS19145 bfc33c3e53b3d5d067bb304b1cba6495 1060 Gene3D G3DSA:1.10.2060.10 72 173 2.2E-48 T 29-03-2018 CHH28_RS19145 bfc33c3e53b3d5d067bb304b1cba6495 1060 SUPERFAMILY SSF53720 552 1043 2.88E-128 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CHH28_RS19145 bfc33c3e53b3d5d067bb304b1cba6495 1060 Gene3D G3DSA:3.20.20.220 174 529 3.8E-97 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like CHH28_RS19145 bfc33c3e53b3d5d067bb304b1cba6495 1060 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 529 1036 1.5E-215 T 29-03-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CHH28_RS19145 bfc33c3e53b3d5d067bb304b1cba6495 1060 Gene3D G3DSA:1.20.5.550 20 67 7.1E-8 T 29-03-2018 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CHH28_RS08215 854443f56fe48de8c222b432250d1ad2 179 Pfam PF13302 Acetyltransferase (GNAT) domain 9 151 4.4E-20 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS08215 854443f56fe48de8c222b432250d1ad2 179 SUPERFAMILY SSF55729 2 175 6.78E-44 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS08215 854443f56fe48de8c222b432250d1ad2 179 Gene3D G3DSA:3.40.630.30 1 179 1.8E-28 T 29-03-2018 CHH28_RS13615 0b7933c52b36befa45c85621e84a6002 400 SUPERFAMILY SSF53448 56 322 1.69E-31 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS13615 0b7933c52b36befa45c85621e84a6002 400 Pfam PF00535 Glycosyl transferase family 2 62 178 3.3E-14 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CHH28_RS13615 0b7933c52b36befa45c85621e84a6002 400 Gene3D G3DSA:3.90.550.10 28 313 7.3E-28 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS17900 e0cb2fc8ba557605b6e3ce1361002cc5 117 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 1 117 2.1E-34 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 CHH28_RS17900 e0cb2fc8ba557605b6e3ce1361002cc5 117 SUPERFAMILY SSF52980 7 109 8.67E-22 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CHH28_RS17900 e0cb2fc8ba557605b6e3ce1361002cc5 117 Pfam PF02021 Uncharacterised protein family UPF0102 14 102 1.1E-27 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 CHH28_RS17900 e0cb2fc8ba557605b6e3ce1361002cc5 117 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 116 22.616 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 CHH28_RS17900 e0cb2fc8ba557605b6e3ce1361002cc5 117 Gene3D G3DSA:3.40.1350.10 12 117 5.1E-35 T 29-03-2018 CHH28_RS06055 9a83a8b7ecd25ee2d1ff71a4573e17dd 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.2E-24 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06055 9a83a8b7ecd25ee2d1ff71a4573e17dd 63 Gene3D G3DSA:1.10.287.310 1 63 4.9E-23 T 29-03-2018 CHH28_RS06055 9a83a8b7ecd25ee2d1ff71a4573e17dd 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.934 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06055 9a83a8b7ecd25ee2d1ff71a4573e17dd 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 9.6E-24 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06055 9a83a8b7ecd25ee2d1ff71a4573e17dd 63 SUPERFAMILY SSF46561 1 61 7.46E-22 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06120 4296460ad25a183e15e216a2eef8b92c 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06120 4296460ad25a183e15e216a2eef8b92c 37 SUPERFAMILY SSF57840 1 37 1.19E-16 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06120 4296460ad25a183e15e216a2eef8b92c 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 2.0E-7 T 29-03-2018 CHH28_RS06120 4296460ad25a183e15e216a2eef8b92c 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 6.2E-23 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06120 4296460ad25a183e15e216a2eef8b92c 37 Pfam PF00444 Ribosomal protein L36 1 37 5.5E-20 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06120 4296460ad25a183e15e216a2eef8b92c 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.457 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS12540 4e9bb4b35382518b928341f493d05b7f 436 PIRSF PIRSF015658 1 436 6.7E-172 T 29-03-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CHH28_RS12540 4e9bb4b35382518b928341f493d05b7f 436 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 435 1.7E-156 T 29-03-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CHH28_RS12540 4e9bb4b35382518b928341f493d05b7f 436 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 430 1.7E-170 T 29-03-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CHH28_RS02465 2ef881facf46ee2a8c9986bad6176a70 253 SUPERFAMILY SSF53335 21 249 1.3E-47 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS02465 2ef881facf46ee2a8c9986bad6176a70 253 Gene3D G3DSA:3.40.50.150 3 252 4.8E-44 T 29-03-2018 CHH28_RS02465 2ef881facf46ee2a8c9986bad6176a70 253 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 160 174 - T 29-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CHH28_RS02465 2ef881facf46ee2a8c9986bad6176a70 253 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 27 252 1.6E-84 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CHH28_RS02465 2ef881facf46ee2a8c9986bad6176a70 253 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 18 252 39.311 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CHH28_RS02465 2ef881facf46ee2a8c9986bad6176a70 253 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 38 53 - T 29-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CHH28_RS02465 2ef881facf46ee2a8c9986bad6176a70 253 Pfam PF01209 ubiE/COQ5 methyltransferase family 22 252 1.4E-103 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CHH28_RS05640 5675bcc427612ae34ddaa2628289d389 435 Pfam PF03150 Di-haem cytochrome c peroxidase 67 242 2.5E-36 T 29-03-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CHH28_RS05640 5675bcc427612ae34ddaa2628289d389 435 Gene3D G3DSA:1.10.760.10 19 162 1.7E-15 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS05640 5675bcc427612ae34ddaa2628289d389 435 Gene3D G3DSA:1.10.760.10 217 422 1.1E-39 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS05640 5675bcc427612ae34ddaa2628289d389 435 SUPERFAMILY SSF46626 49 176 2.15E-28 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS05640 5675bcc427612ae34ddaa2628289d389 435 SUPERFAMILY SSF46626 344 420 2.64E-26 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS05640 5675bcc427612ae34ddaa2628289d389 435 SUPERFAMILY SSF46626 222 295 2.64E-26 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS01625 eff2dc04b7f03ef6729c7e00c05c6707 503 Pfam PF00361 Proton-conducting membrane transporter 131 419 9.5E-41 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CHH28_RS01625 eff2dc04b7f03ef6729c7e00c05c6707 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 1.8E-13 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CHH28_RS01625 eff2dc04b7f03ef6729c7e00c05c6707 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 330 349 1.8E-13 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CHH28_RS01625 eff2dc04b7f03ef6729c7e00c05c6707 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 383 409 1.8E-13 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CHH28_RS01625 eff2dc04b7f03ef6729c7e00c05c6707 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 165 189 1.8E-13 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CHH28_RS01625 eff2dc04b7f03ef6729c7e00c05c6707 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 135 154 1.8E-13 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CHH28_RS04285 35340a7429c3d71df501470a5c74c606 519 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 144 165 2.1E-20 T 29-03-2018 CHH28_RS04285 35340a7429c3d71df501470a5c74c606 519 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 69 94 2.1E-20 T 29-03-2018 CHH28_RS04285 35340a7429c3d71df501470a5c74c606 519 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 211 232 2.1E-20 T 29-03-2018 CHH28_RS04285 35340a7429c3d71df501470a5c74c606 519 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 233 259 2.1E-20 T 29-03-2018 CHH28_RS04285 35340a7429c3d71df501470a5c74c606 519 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 300 312 2.1E-20 T 29-03-2018 CHH28_RS04285 35340a7429c3d71df501470a5c74c606 519 Pfam PF00361 Proton-conducting membrane transporter 120 340 3.6E-38 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CHH28_RS04285 35340a7429c3d71df501470a5c74c606 519 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 107 1.7E-5 T 29-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CHH28_RS05400 80349eabfcffcb6347dad27ae8f063a9 657 Gene3D G3DSA:1.10.3680.10 476 655 6.0E-24 T 29-03-2018 IPR029024 TerB-like CHH28_RS05400 80349eabfcffcb6347dad27ae8f063a9 657 Gene3D G3DSA:3.30.2010.10 104 194 3.2E-17 T 29-03-2018 CHH28_RS05400 80349eabfcffcb6347dad27ae8f063a9 657 SUPERFAMILY SSF158682 462 530 5.49E-5 T 29-03-2018 CHH28_RS05400 80349eabfcffcb6347dad27ae8f063a9 657 Pfam PF01435 Peptidase family M48 113 333 1.5E-29 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CHH28_RS07115 a0792c69591d696855e3a44c79e73547 106 Pfam PF13586 Transposase DDE domain 27 105 1.7E-9 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS15080 0007efa551cc8aeaac91d94dd326135b 217 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 6 201 3.8E-51 T 29-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CHH28_RS15080 0007efa551cc8aeaac91d94dd326135b 217 SUPERFAMILY SSF51366 4 203 8.0E-62 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CHH28_RS15080 0007efa551cc8aeaac91d94dd326135b 217 Gene3D G3DSA:3.20.20.70 3 208 8.1E-70 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS15080 0007efa551cc8aeaac91d94dd326135b 217 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 4 206 41.404 T 29-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CHH28_RS02940 47b3a054658f8ab476da83ccee72181d 183 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 125 131 - T 29-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CHH28_RS02940 47b3a054658f8ab476da83ccee72181d 183 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 75 154 5.7E-36 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CHH28_RS02940 47b3a054658f8ab476da83ccee72181d 183 Gene3D G3DSA:1.10.10.10 71 156 3.5E-35 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS02940 47b3a054658f8ab476da83ccee72181d 183 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 72 1.4E-6 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CHH28_RS02940 47b3a054658f8ab476da83ccee72181d 183 SUPERFAMILY SSF53155 2 80 6.87E-21 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CHH28_RS02940 47b3a054658f8ab476da83ccee72181d 183 Gene3D G3DSA:3.30.160.70 1 70 1.6E-20 T 29-03-2018 CHH28_RS02940 47b3a054658f8ab476da83ccee72181d 183 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 155 40.992 T 29-03-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 CHH28_RS02940 47b3a054658f8ab476da83ccee72181d 183 SUPERFAMILY SSF46767 74 155 1.29E-31 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CHH28_RS02940 47b3a054658f8ab476da83ccee72181d 183 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 76 155 3.7E-33 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CHH28_RS11430 92a42b443073c835121eed8564820ced 435 Pfam PF00271 Helicase conserved C-terminal domain 219 325 9.8E-29 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS11430 92a42b443073c835121eed8564820ced 435 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 137 145 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CHH28_RS11430 92a42b443073c835121eed8564820ced 435 SMART SM00487 8 207 4.7E-50 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CHH28_RS11430 92a42b443073c835121eed8564820ced 435 SMART SM00490 244 325 6.0E-29 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS11430 92a42b443073c835121eed8564820ced 435 Gene3D G3DSA:3.40.50.300 2 209 3.7E-54 T 29-03-2018 CHH28_RS11430 92a42b443073c835121eed8564820ced 435 Pfam PF00270 DEAD/DEAH box helicase 13 180 3.5E-46 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CHH28_RS11430 92a42b443073c835121eed8564820ced 435 SUPERFAMILY SSF52540 24 335 4.06E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11430 92a42b443073c835121eed8564820ced 435 Gene3D G3DSA:3.40.50.300 210 422 6.2E-44 T 29-03-2018 CHH28_RS17250 0568268c0aeb2b9434e2fdb306963f27 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 205 3.0E-4 T 29-03-2018 CHH28_RS17250 0568268c0aeb2b9434e2fdb306963f27 254 Pfam PF00106 short chain dehydrogenase 2 192 9.5E-50 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17250 0568268c0aeb2b9434e2fdb306963f27 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 2.4E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17250 0568268c0aeb2b9434e2fdb306963f27 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 2.4E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17250 0568268c0aeb2b9434e2fdb306963f27 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 2.4E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17250 0568268c0aeb2b9434e2fdb306963f27 254 SUPERFAMILY SSF51735 3 250 2.13E-59 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS17250 0568268c0aeb2b9434e2fdb306963f27 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.2E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17250 0568268c0aeb2b9434e2fdb306963f27 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 4.2E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17250 0568268c0aeb2b9434e2fdb306963f27 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 4.2E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17250 0568268c0aeb2b9434e2fdb306963f27 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 4.2E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17250 0568268c0aeb2b9434e2fdb306963f27 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 4.2E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17250 0568268c0aeb2b9434e2fdb306963f27 254 Gene3D G3DSA:3.40.50.720 2 254 9.0E-55 T 29-03-2018 CHH28_RS17250 0568268c0aeb2b9434e2fdb306963f27 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CHH28_RS11570 803d75901bd430b4c46c5caa4f2c3e7e 531 SUPERFAMILY SSF51621 429 514 1.17E-119 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CHH28_RS11570 803d75901bd430b4c46c5caa4f2c3e7e 531 SUPERFAMILY SSF51621 7 392 1.17E-119 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CHH28_RS11570 803d75901bd430b4c46c5caa4f2c3e7e 531 PIRSF PIRSF001362 416 531 1.6E-5 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CHH28_RS11570 803d75901bd430b4c46c5caa4f2c3e7e 531 PIRSF PIRSF001362 1 282 1.1E-28 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CHH28_RS11570 803d75901bd430b4c46c5caa4f2c3e7e 531 PIRSF PIRSF001362 294 409 1.7E-14 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CHH28_RS11570 803d75901bd430b4c46c5caa4f2c3e7e 531 Pfam PF00463 Isocitrate lyase family 317 398 1.2E-11 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CHH28_RS11570 803d75901bd430b4c46c5caa4f2c3e7e 531 Pfam PF00463 Isocitrate lyase family 98 270 1.3E-19 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CHH28_RS11570 803d75901bd430b4c46c5caa4f2c3e7e 531 Pfam PF00463 Isocitrate lyase family 447 530 4.0E-12 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CHH28_RS11570 803d75901bd430b4c46c5caa4f2c3e7e 531 Gene3D G3DSA:3.20.20.60 1 514 7.9E-125 T 29-03-2018 CHH28_RS10305 43b19ae9ad688043cda465aced8c9eb0 284 SUPERFAMILY SSF117070 160 281 3.92E-21 T 29-03-2018 CHH28_RS10305 43b19ae9ad688043cda465aced8c9eb0 284 ProDom PD010978 LATE EMBRYOGENESIS ABUNDANT DESICCATION SIMILAR PROTECTANT PROTEINS RELATED EMBRYOGENESIS-ABUNDANT EMBRYOGENESIS-LIKE 32 160 5.0E-11 T 29-03-2018 CHH28_RS10305 43b19ae9ad688043cda465aced8c9eb0 284 Pfam PF03168 Late embryogenesis abundant protein 56 148 1.2E-9 T 29-03-2018 IPR004864 Late embryogenesis abundant protein, LEA-14 CHH28_RS10305 43b19ae9ad688043cda465aced8c9eb0 284 Pfam PF03168 Late embryogenesis abundant protein 183 261 5.8E-9 T 29-03-2018 IPR004864 Late embryogenesis abundant protein, LEA-14 CHH28_RS10305 43b19ae9ad688043cda465aced8c9eb0 284 SMART SM00769 35 153 1.1E-10 T 29-03-2018 IPR013990 Water stress and hypersensitive response domain GO:0009269 CHH28_RS10305 43b19ae9ad688043cda465aced8c9eb0 284 SMART SM00769 162 279 9.5E-13 T 29-03-2018 IPR013990 Water stress and hypersensitive response domain GO:0009269 CHH28_RS10305 43b19ae9ad688043cda465aced8c9eb0 284 Gene3D G3DSA:2.60.40.10 34 155 5.2E-16 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS10305 43b19ae9ad688043cda465aced8c9eb0 284 Gene3D G3DSA:2.60.40.10 160 283 4.8E-19 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS10305 43b19ae9ad688043cda465aced8c9eb0 284 SUPERFAMILY SSF117070 13 160 1.83E-28 T 29-03-2018 CHH28_RS02405 54e6f9ded6cee4a609bf56c8d5f88c8e 719 Gene3D G3DSA:3.40.190.10 8 541 2.5E-4 T 29-03-2018 CHH28_RS09060 1cc0a5d48911499438dfaa679d025a63 250 Gene3D G3DSA:3.40.190.10 124 208 1.8E-10 T 29-03-2018 CHH28_RS09060 1cc0a5d48911499438dfaa679d025a63 250 SUPERFAMILY SSF53850 26 249 9.96E-33 T 29-03-2018 CHH28_RS09060 1cc0a5d48911499438dfaa679d025a63 250 SMART SM00062 27 248 0.0046 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS09060 1cc0a5d48911499438dfaa679d025a63 250 Gene3D G3DSA:3.40.190.10 17 123 2.2E-11 T 29-03-2018 CHH28_RS09060 1cc0a5d48911499438dfaa679d025a63 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 249 1.3E-20 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS07130 c937c30ac6db8def7045d906a3701785 776 Gene3D G3DSA:3.40.190.10 7 646 4.2E-4 T 29-03-2018 CHH28_RS07130 c937c30ac6db8def7045d906a3701785 776 SMART SM01225 144 266 1.3E-4 T 29-03-2018 IPR019316 G8 domain CHH28_RS07130 c937c30ac6db8def7045d906a3701785 776 Pfam PF10162 G8 domain 145 256 1.7E-10 T 29-03-2018 IPR019316 G8 domain CHH28_RS10080 d595c9211f56c666ace587db1b7ba30b 215 SUPERFAMILY SSF53335 15 185 8.56E-18 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS10080 d595c9211f56c666ace587db1b7ba30b 215 Gene3D G3DSA:3.40.50.150 13 206 6.5E-12 T 29-03-2018 CHH28_RS10080 d595c9211f56c666ace587db1b7ba30b 215 Pfam PF13489 Methyltransferase domain 57 174 6.1E-9 T 29-03-2018 CHH28_RS03185 544ccbc3607c895df45f7201b7e89ec5 476 SUPERFAMILY SSF53613 12 312 5.3E-56 T 29-03-2018 IPR029056 Ribokinase-like CHH28_RS03185 544ccbc3607c895df45f7201b7e89ec5 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.607 T 29-03-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 CHH28_RS03185 544ccbc3607c895df45f7201b7e89ec5 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 50 74 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CHH28_RS03185 544ccbc3607c895df45f7201b7e89ec5 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 343 408 2.2E-17 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CHH28_RS03185 544ccbc3607c895df45f7201b7e89ec5 476 Pfam PF01467 Cytidylyltransferase-like 345 436 2.5E-17 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CHH28_RS03185 544ccbc3607c895df45f7201b7e89ec5 476 SUPERFAMILY SSF52374 342 471 5.63E-23 T 29-03-2018 CHH28_RS03185 544ccbc3607c895df45f7201b7e89ec5 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 3.9E-124 T 29-03-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 CHH28_RS03185 544ccbc3607c895df45f7201b7e89ec5 476 Pfam PF00294 pfkB family carbohydrate kinase 12 302 2.4E-46 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CHH28_RS03185 544ccbc3607c895df45f7201b7e89ec5 476 Gene3D G3DSA:3.40.50.620 324 476 3.8E-26 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS03185 544ccbc3607c895df45f7201b7e89ec5 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 473 5.0E-63 T 29-03-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 CHH28_RS03185 544ccbc3607c895df45f7201b7e89ec5 476 Gene3D G3DSA:3.40.1190.20 4 310 3.2E-55 T 29-03-2018 IPR029056 Ribokinase-like CHH28_RS10190 943942a5b2752bf82ee4eb2a048ee935 215 SUPERFAMILY SSF52833 164 213 4.33E-24 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS10190 943942a5b2752bf82ee4eb2a048ee935 215 SUPERFAMILY SSF52833 48 132 4.33E-24 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS10190 943942a5b2752bf82ee4eb2a048ee935 215 Pfam PF13098 Thioredoxin-like domain 51 211 7.6E-22 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS10190 943942a5b2752bf82ee4eb2a048ee935 215 Gene3D G3DSA:3.40.30.10 42 215 3.5E-21 T 29-03-2018 CHH28_RS03795 c267a1a8de071f58a33d9fb50be05fde 313 Gene3D G3DSA:3.40.190.10 1 107 5.0E-46 T 29-03-2018 CHH28_RS03795 c267a1a8de071f58a33d9fb50be05fde 313 Gene3D G3DSA:3.30.160.40 222 305 3.1E-27 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CHH28_RS03795 c267a1a8de071f58a33d9fb50be05fde 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 2.1E-114 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CHH28_RS03795 c267a1a8de071f58a33d9fb50be05fde 313 SUPERFAMILY SSF53850 6 220 7.91E-85 T 29-03-2018 CHH28_RS03795 c267a1a8de071f58a33d9fb50be05fde 313 SUPERFAMILY SSF54782 222 309 3.27E-29 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CHH28_RS03795 c267a1a8de071f58a33d9fb50be05fde 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 29-03-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CHH28_RS03795 c267a1a8de071f58a33d9fb50be05fde 313 Gene3D G3DSA:3.40.190.10 108 200 8.0E-36 T 29-03-2018 CHH28_RS03795 c267a1a8de071f58a33d9fb50be05fde 313 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 3.1E-49 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CHH28_RS03795 c267a1a8de071f58a33d9fb50be05fde 313 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 3.1E-49 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CHH28_RS03795 c267a1a8de071f58a33d9fb50be05fde 313 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 3.1E-49 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CHH28_RS03795 c267a1a8de071f58a33d9fb50be05fde 313 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 3.1E-49 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CHH28_RS03795 c267a1a8de071f58a33d9fb50be05fde 313 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 3.1E-49 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CHH28_RS03795 c267a1a8de071f58a33d9fb50be05fde 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 3.1E-22 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CHH28_RS03795 c267a1a8de071f58a33d9fb50be05fde 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 38.818 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CHH28_RS03795 c267a1a8de071f58a33d9fb50be05fde 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 214 4.8E-78 T 29-03-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CHH28_RS03795 c267a1a8de071f58a33d9fb50be05fde 313 PIRSF PIRSF001438 1 312 1.1E-121 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CHH28_RS09785 13cafa45fd3c3fafb68d3552b2b2e5f1 234 SMART SM00644 60 209 1.7E-44 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CHH28_RS09785 13cafa45fd3c3fafb68d3552b2b2e5f1 234 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 72 210 6.8E-26 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CHH28_RS09785 13cafa45fd3c3fafb68d3552b2b2e5f1 234 Gene3D G3DSA:3.40.80.10 46 225 9.6E-49 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CHH28_RS09785 13cafa45fd3c3fafb68d3552b2b2e5f1 234 SUPERFAMILY SSF55846 48 224 7.86E-64 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 2.6E-48 T 29-03-2018 IPR013842 GTP-binding protein LepA, C-terminal CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 TIGRFAM TIGR01393 lepA: elongation factor 4 6 597 3.0E-291 T 29-03-2018 IPR006297 Elongation factor 4 GO:0005525 CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 Gene3D G3DSA:2.40.30.10 191 290 1.2E-22 T 29-03-2018 CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 Gene3D G3DSA:3.30.70.240 395 552 5.8E-26 T 29-03-2018 CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 SUPERFAMILY SSF52540 4 233 3.02E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 599 296.841 T 29-03-2018 IPR006297 Elongation factor 4 GO:0005525 CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 Gene3D G3DSA:3.40.50.300 2 188 9.8E-36 T 29-03-2018 CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 SUPERFAMILY SSF54980 403 496 9.11E-25 T 29-03-2018 IPR035647 EF-G domain III/V-like CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 Pfam PF00679 Elongation factor G C-terminus 402 487 1.2E-20 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 SMART SM00838 404 489 3.0E-4 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 Gene3D G3DSA:3.30.70.870 291 370 5.9E-28 T 29-03-2018 CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 1.1E-51 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 PRINTS PR00315 GTP-binding elongation factor signature 93 104 3.6E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 PRINTS PR00315 GTP-binding elongation factor signature 77 87 3.6E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 PRINTS PR00315 GTP-binding elongation factor signature 52 60 3.6E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 PRINTS PR00315 GTP-binding elongation factor signature 129 138 3.6E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 PRINTS PR00315 GTP-binding elongation factor signature 9 22 3.6E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 175 7.9E-17 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CHH28_RS11135 183c6fc633cdb90ba70e187f63dc18bd 599 SUPERFAMILY SSF54980 295 373 7.55E-19 T 29-03-2018 IPR035647 EF-G domain III/V-like CHH28_RS02805 935a7072df0819bb167623424f54cbd6 519 Pfam PF00732 GMC oxidoreductase 22 286 2.7E-49 T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CHH28_RS02805 935a7072df0819bb167623424f54cbd6 519 Pfam PF05199 GMC oxidoreductase 369 504 2.4E-20 T 29-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 CHH28_RS02805 935a7072df0819bb167623424f54cbd6 519 PIRSF PIRSF000137 4 173 4.3E-16 T 29-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CHH28_RS02805 935a7072df0819bb167623424f54cbd6 519 PIRSF PIRSF000137 197 281 0.0017 T 29-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CHH28_RS02805 935a7072df0819bb167623424f54cbd6 519 PIRSF PIRSF000137 321 518 6.4E-11 T 29-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CHH28_RS02805 935a7072df0819bb167623424f54cbd6 519 SUPERFAMILY SSF51905 453 515 1.94E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS02805 935a7072df0819bb167623424f54cbd6 519 SUPERFAMILY SSF51905 20 284 1.94E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS02805 935a7072df0819bb167623424f54cbd6 519 Gene3D G3DSA:3.50.50.60 5 518 1.0E-56 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS02805 935a7072df0819bb167623424f54cbd6 519 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 454 469 2.8E-6 T 29-03-2018 CHH28_RS02805 935a7072df0819bb167623424f54cbd6 519 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 22 44 2.8E-6 T 29-03-2018 CHH28_RS02805 935a7072df0819bb167623424f54cbd6 519 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 218 243 2.8E-6 T 29-03-2018 CHH28_RS16680 a19bd6459aba38ff9d68d876a9b69df2 112 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS16680 a19bd6459aba38ff9d68d876a9b69df2 112 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.7E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS16680 a19bd6459aba38ff9d68d876a9b69df2 112 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.7E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS16680 a19bd6459aba38ff9d68d876a9b69df2 112 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.7E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS16680 a19bd6459aba38ff9d68d876a9b69df2 112 Gene3D G3DSA:1.10.1660.10 1 55 3.9E-21 T 29-03-2018 CHH28_RS16680 a19bd6459aba38ff9d68d876a9b69df2 112 SUPERFAMILY SSF46955 1 105 3.04E-26 T 29-03-2018 IPR009061 Putative DNA-binding domain CHH28_RS16680 a19bd6459aba38ff9d68d876a9b69df2 112 Pfam PF13411 MerR HTH family regulatory protein 1 67 1.6E-19 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS16680 a19bd6459aba38ff9d68d876a9b69df2 112 SMART SM00422 1 70 1.2E-18 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS16680 a19bd6459aba38ff9d68d876a9b69df2 112 Gene3D G3DSA:1.10.1660.10 56 111 1.6E-6 T 29-03-2018 CHH28_RS16165 9f380fc46b8c213dc41bff183f7301ec 187 Gene3D G3DSA:3.40.50.2020 4 186 1.1E-35 T 29-03-2018 CHH28_RS16165 9f380fc46b8c213dc41bff183f7301ec 187 SUPERFAMILY SSF53271 18 185 2.88E-42 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CHH28_RS16165 9f380fc46b8c213dc41bff183f7301ec 187 Pfam PF00156 Phosphoribosyl transferase domain 20 156 2.2E-20 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CHH28_RS01405 a2b13eba046e399b8bebd18fd5b7a16e 118 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 5.0E-27 T 29-03-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CHH28_RS01405 a2b13eba046e399b8bebd18fd5b7a16e 118 Gene3D G3DSA:3.30.1130.10 1 118 4.0E-34 T 29-03-2018 CHH28_RS01405 a2b13eba046e399b8bebd18fd5b7a16e 118 TIGRFAM TIGR00526 folB_dom: FolB domain 1 115 1.8E-30 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CHH28_RS01405 a2b13eba046e399b8bebd18fd5b7a16e 118 SMART SM00905 4 114 9.3E-43 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CHH28_RS01405 a2b13eba046e399b8bebd18fd5b7a16e 118 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.7E-31 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CHH28_RS01405 a2b13eba046e399b8bebd18fd5b7a16e 118 SUPERFAMILY SSF55620 1 114 1.28E-33 T 29-03-2018 CHH28_RS10035 2f0df62d19c2a23d5066526e61b27624 298 SUPERFAMILY SSF53850 88 295 3.62E-19 T 29-03-2018 CHH28_RS10035 2f0df62d19c2a23d5066526e61b27624 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS10035 2f0df62d19c2a23d5066526e61b27624 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS10035 2f0df62d19c2a23d5066526e61b27624 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS10035 2f0df62d19c2a23d5066526e61b27624 298 Gene3D G3DSA:3.40.190.10 179 257 1.5E-8 T 29-03-2018 CHH28_RS10035 2f0df62d19c2a23d5066526e61b27624 298 Gene3D G3DSA:3.40.190.10 80 178 3.4E-10 T 29-03-2018 CHH28_RS10035 2f0df62d19c2a23d5066526e61b27624 298 Pfam PF03466 LysR substrate binding domain 92 276 4.4E-17 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS10035 2f0df62d19c2a23d5066526e61b27624 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.9E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS10035 2f0df62d19c2a23d5066526e61b27624 298 SUPERFAMILY SSF46785 4 88 2.66E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS10035 2f0df62d19c2a23d5066526e61b27624 298 Gene3D G3DSA:1.10.10.10 1 79 7.4E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS01680 487c1e1c816698d666b89134f23abace 177 Pfam PF04351 Pilus assembly protein, PilP 24 171 8.0E-47 T 29-03-2018 IPR007446 Pilus assembly protein PilP CHH28_RS01680 487c1e1c816698d666b89134f23abace 177 PIRSF PIRSF016481 1 175 1.5E-48 T 29-03-2018 IPR007446 Pilus assembly protein PilP CHH28_RS01070 e3f38afcc12b2de98d8dfe31b9316dbc 548 SUPERFAMILY SSF56176 235 434 3.33E-48 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CHH28_RS01070 e3f38afcc12b2de98d8dfe31b9316dbc 548 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 444 543 6.2E-30 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CHH28_RS01070 e3f38afcc12b2de98d8dfe31b9316dbc 548 Gene3D G3DSA:3.10.20.30 56 138 8.6E-23 T 29-03-2018 IPR012675 Beta-grasp domain CHH28_RS01070 e3f38afcc12b2de98d8dfe31b9316dbc 548 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 96 104 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CHH28_RS01070 e3f38afcc12b2de98d8dfe31b9316dbc 548 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 59 542 1.8E-157 T 29-03-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 CHH28_RS01070 e3f38afcc12b2de98d8dfe31b9316dbc 548 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 62 125 2.1E-6 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CHH28_RS01070 e3f38afcc12b2de98d8dfe31b9316dbc 548 PIRSF PIRSF036557 56 548 1.3E-159 T 29-03-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria CHH28_RS01070 e3f38afcc12b2de98d8dfe31b9316dbc 548 Gene3D G3DSA:3.30.43.10 267 321 5.1E-12 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CHH28_RS01070 e3f38afcc12b2de98d8dfe31b9316dbc 548 Gene3D G3DSA:3.30.390.50 438 546 1.1E-30 T 29-03-2018 CHH28_RS01070 e3f38afcc12b2de98d8dfe31b9316dbc 548 SUPERFAMILY SSF55447 441 544 3.53E-32 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CHH28_RS01070 e3f38afcc12b2de98d8dfe31b9316dbc 548 SUPERFAMILY SSF54292 59 141 2.83E-14 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CHH28_RS01070 e3f38afcc12b2de98d8dfe31b9316dbc 548 Pfam PF01799 [2Fe-2S] binding domain 139 231 1.9E-28 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CHH28_RS01070 e3f38afcc12b2de98d8dfe31b9316dbc 548 Gene3D G3DSA:3.30.465.10 323 435 6.8E-32 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CHH28_RS01070 e3f38afcc12b2de98d8dfe31b9316dbc 548 SMART SM01092 443 544 7.7E-33 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CHH28_RS01070 e3f38afcc12b2de98d8dfe31b9316dbc 548 SUPERFAMILY SSF47741 149 238 6.41E-28 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CHH28_RS01070 e3f38afcc12b2de98d8dfe31b9316dbc 548 Gene3D G3DSA:1.10.150.120 139 266 5.7E-34 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CHH28_RS01070 e3f38afcc12b2de98d8dfe31b9316dbc 548 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 272 435 1.0E-43 T 29-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CHH28_RS06845 ba279ac58f11b8b1631a0ff7eac67bb9 194 Pfam PF07238 PilZ domain 92 174 5.9E-10 T 29-03-2018 IPR009875 PilZ domain GO:0035438 CHH28_RS06845 ba279ac58f11b8b1631a0ff7eac67bb9 194 Gene3D G3DSA:2.40.10.220 4 178 3.1E-20 T 29-03-2018 CHH28_RS03515 0c703db21898057558cfb52fcfb9a089 320 Gene3D G3DSA:1.10.10.670 189 212 1.1E-8 T 29-03-2018 CHH28_RS03515 0c703db21898057558cfb52fcfb9a089 320 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 29-03-2018 IPR019775 WD40 repeat, conserved site CHH28_RS03515 0c703db21898057558cfb52fcfb9a089 320 Pfam PF13360 PQQ-like domain 58 305 8.3E-6 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CHH28_RS03515 0c703db21898057558cfb52fcfb9a089 320 SMART SM00320 151 189 0.0022 T 29-03-2018 IPR001680 WD40 repeat GO:0005515 CHH28_RS03515 0c703db21898057558cfb52fcfb9a089 320 SMART SM00320 233 272 0.012 T 29-03-2018 IPR001680 WD40 repeat GO:0005515 CHH28_RS03515 0c703db21898057558cfb52fcfb9a089 320 SMART SM00320 66 107 130.0 T 29-03-2018 IPR001680 WD40 repeat GO:0005515 CHH28_RS03515 0c703db21898057558cfb52fcfb9a089 320 SMART SM00320 192 230 1.2 T 29-03-2018 IPR001680 WD40 repeat GO:0005515 CHH28_RS03515 0c703db21898057558cfb52fcfb9a089 320 Gene3D G3DSA:2.130.10.10 24 169 1.4E-17 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS03515 0c703db21898057558cfb52fcfb9a089 320 SUPERFAMILY SSF50998 35 283 7.85E-42 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CHH28_RS03515 0c703db21898057558cfb52fcfb9a089 320 Gene3D G3DSA:2.80.10.50 170 188 7.1E-7 T 29-03-2018 CHH28_RS03515 0c703db21898057558cfb52fcfb9a089 320 Gene3D G3DSA:2.80.10.50 213 238 1.6E-4 T 29-03-2018 CHH28_RS03515 0c703db21898057558cfb52fcfb9a089 320 Gene3D G3DSA:2.130.10.10 239 314 1.8E-10 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS14985 f17c1e3e11245ea7467a2d452938ac96 553 SUPERFAMILY SSF56935 34 98 4.15E-42 T 29-03-2018 CHH28_RS14985 f17c1e3e11245ea7467a2d452938ac96 553 SUPERFAMILY SSF56935 131 494 4.15E-42 T 29-03-2018 CHH28_RS14985 f17c1e3e11245ea7467a2d452938ac96 553 Gene3D G3DSA:2.40.160.60 28 553 1.3E-57 T 29-03-2018 CHH28_RS14985 f17c1e3e11245ea7467a2d452938ac96 553 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 15 514 3.4E-70 T 29-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CHH28_RS13335 a94d7e53b6f1165185c2a6b30b4b53ee 137 Gene3D G3DSA:1.10.10.10 9 127 8.5E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS13335 a94d7e53b6f1165185c2a6b30b4b53ee 137 SUPERFAMILY SSF46785 13 107 9.98E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS12245 9bf9996d264c68f20783dd669e7a98ec 364 SMART SM00327 200 359 4.1E-6 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS12245 9bf9996d264c68f20783dd669e7a98ec 364 Pfam PF05762 VWA domain containing CoxE-like protein 143 358 2.9E-50 T 29-03-2018 IPR008912 Uncharacterised protein family CoxE-like CHH28_RS12245 9bf9996d264c68f20783dd669e7a98ec 364 Gene3D G3DSA:3.40.50.410 161 351 1.1E-14 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS12245 9bf9996d264c68f20783dd669e7a98ec 364 SUPERFAMILY SSF53300 197 330 9.07E-20 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS07725 ea8f4f82aed0a99dec88f42d3992f695 229 SMART SM00862 151 227 2.4E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS07725 ea8f4f82aed0a99dec88f42d3992f695 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 8.3E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS07725 ea8f4f82aed0a99dec88f42d3992f695 229 Gene3D G3DSA:3.40.50.2300 1 125 1.6E-32 T 29-03-2018 CHH28_RS07725 ea8f4f82aed0a99dec88f42d3992f695 229 SMART SM00448 4 113 1.3E-40 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS07725 ea8f4f82aed0a99dec88f42d3992f695 229 Gene3D G3DSA:1.10.10.10 126 229 7.9E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS07725 ea8f4f82aed0a99dec88f42d3992f695 229 Pfam PF00072 Response regulator receiver domain 6 113 6.8E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS07725 ea8f4f82aed0a99dec88f42d3992f695 229 SUPERFAMILY SSF52172 1 180 1.1E-36 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS02700 3d2f37b2a880957c653e2f819ab23693 142 Pfam PF00583 Acetyltransferase (GNAT) family 21 123 4.3E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS02700 3d2f37b2a880957c653e2f819ab23693 142 Gene3D G3DSA:3.40.630.30 1 135 2.4E-18 T 29-03-2018 CHH28_RS02700 3d2f37b2a880957c653e2f819ab23693 142 SUPERFAMILY SSF55729 2 131 3.6E-20 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS00760 821c83363ffa74b979a647e9b5b9f952 130 Pfam PF04134 Protein of unknown function, DUF393 9 117 1.5E-25 T 29-03-2018 IPR007263 Protein of unknown function DUF393 CHH28_RS00760 821c83363ffa74b979a647e9b5b9f952 130 Gene3D G3DSA:3.40.30.10 4 75 7.9E-5 T 29-03-2018 CHH28_RS07365 1881c4e0a171fdb54362b3b722ee7679 288 SUPERFAMILY SSF53474 52 278 1.0E-27 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS07365 1881c4e0a171fdb54362b3b722ee7679 288 Pfam PF12697 Alpha/beta hydrolase family 76 182 1.1E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS07365 1881c4e0a171fdb54362b3b722ee7679 288 Gene3D G3DSA:3.40.50.1820 71 287 1.5E-27 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS17245 b4b52aea741ac361bb1569236e49655f 939 Pfam PF05193 Peptidase M16 inactive domain 211 386 1.3E-23 T 29-03-2018 IPR007863 Peptidase M16, C-terminal CHH28_RS17245 b4b52aea741ac361bb1569236e49655f 939 Pfam PF05193 Peptidase M16 inactive domain 674 846 6.5E-8 T 29-03-2018 IPR007863 Peptidase M16, C-terminal CHH28_RS17245 b4b52aea741ac361bb1569236e49655f 939 Gene3D G3DSA:3.30.830.10 15 262 2.9E-82 T 29-03-2018 CHH28_RS17245 b4b52aea741ac361bb1569236e49655f 939 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 71 94 - T 29-03-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CHH28_RS17245 b4b52aea741ac361bb1569236e49655f 939 Gene3D G3DSA:3.30.830.10 496 736 9.3E-34 T 29-03-2018 CHH28_RS17245 b4b52aea741ac361bb1569236e49655f 939 Pfam PF16187 Middle or third domain of peptidase_M16 395 670 2.4E-61 T 29-03-2018 IPR032632 Peptidase M16, middle/third domain CHH28_RS17245 b4b52aea741ac361bb1569236e49655f 939 SUPERFAMILY SSF63411 497 720 1.57E-46 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CHH28_RS17245 b4b52aea741ac361bb1569236e49655f 939 SUPERFAMILY SSF63411 29 256 5.24E-60 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CHH28_RS17245 b4b52aea741ac361bb1569236e49655f 939 Gene3D G3DSA:3.30.830.10 263 477 3.7E-52 T 29-03-2018 CHH28_RS17245 b4b52aea741ac361bb1569236e49655f 939 SUPERFAMILY SSF63411 728 912 3.67E-39 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CHH28_RS17245 b4b52aea741ac361bb1569236e49655f 939 SUPERFAMILY SSF63411 264 477 7.55E-55 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CHH28_RS17245 b4b52aea741ac361bb1569236e49655f 939 Gene3D G3DSA:3.30.830.10 737 912 8.3E-32 T 29-03-2018 CHH28_RS17245 b4b52aea741ac361bb1569236e49655f 939 Pfam PF00675 Insulinase (Peptidase family M16) 51 187 1.7E-36 T 29-03-2018 IPR011765 Peptidase M16, N-terminal CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 Gene3D G3DSA:3.30.565.10 17 216 2.5E-64 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 SUPERFAMILY SSF55874 4 213 1.64E-64 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 SMART SM00387 27 173 4.6E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 SUPERFAMILY SSF56719 388 622 3.66E-78 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 558 620 3.2E-25 T 29-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 Gene3D G3DSA:3.30.230.10 217 391 2.9E-41 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 Pfam PF01751 Toprim domain 413 522 7.4E-13 T 29-03-2018 IPR006171 TOPRIM domain CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR00418 DNA topoisomerase II family signature 66 79 2.5E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR00418 DNA topoisomerase II family signature 109 123 2.5E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR00418 DNA topoisomerase II family signature 266 279 2.5E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR00418 DNA topoisomerase II family signature 562 578 2.5E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR00418 DNA topoisomerase II family signature 414 428 2.5E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR00418 DNA topoisomerase II family signature 31 46 2.5E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR00418 DNA topoisomerase II family signature 479 495 2.5E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR00418 DNA topoisomerase II family signature 497 514 2.5E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR00418 DNA topoisomerase II family signature 517 529 2.5E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 Pfam PF00204 DNA gyrase B 218 384 4.9E-41 T 29-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 SUPERFAMILY SSF54211 217 382 9.86E-48 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 625 0.0 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 SMART SM00433 34 624 2.0E-210 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 628 46.883 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 1.2E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 Gene3D G3DSA:3.40.50.670 395 627 6.8E-79 T 29-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 29-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 1.3E-108 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.3E-108 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 1.3E-108 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 1.3E-108 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 1.3E-108 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.3E-108 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 1.3E-108 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 1.3E-108 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.3E-108 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 1.3E-108 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 1.3E-108 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.3E-108 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.3E-108 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS03220 2cc7b9c9fe1fbead10e4fc2649bad6ec 629 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 1.3E-108 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CHH28_RS11220 23a79af4dbbd933defd51b5aaba3080f 274 Pfam PF04445 Putative SAM-dependent methyltransferase 32 267 9.8E-72 T 29-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CHH28_RS11220 23a79af4dbbd933defd51b5aaba3080f 274 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 269 34.412 T 29-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CHH28_RS11220 23a79af4dbbd933defd51b5aaba3080f 274 Gene3D G3DSA:3.40.50.150 60 274 8.7E-40 T 29-03-2018 CHH28_RS11220 23a79af4dbbd933defd51b5aaba3080f 274 SUPERFAMILY SSF53335 1 268 7.58E-58 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS17480 d174799a7ddc057ff5dbb1610a96dc4b 225 Pfam PF13302 Acetyltransferase (GNAT) domain 62 200 1.6E-17 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS17480 d174799a7ddc057ff5dbb1610a96dc4b 225 SUPERFAMILY SSF55729 55 221 7.7E-27 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS17480 d174799a7ddc057ff5dbb1610a96dc4b 225 Gene3D G3DSA:3.40.630.30 42 225 5.6E-21 T 29-03-2018 CHH28_RS08420 636057880ee75af264bc67a99e21c98d 178 Pfam PF00578 AhpC/TSA family 31 146 2.2E-23 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CHH28_RS08420 636057880ee75af264bc67a99e21c98d 178 Gene3D G3DSA:3.40.30.10 20 177 1.0E-36 T 29-03-2018 CHH28_RS08420 636057880ee75af264bc67a99e21c98d 178 SUPERFAMILY SSF52833 25 162 1.44E-38 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS09565 14141222415548c133dee77d062bed41 958 SUPERFAMILY SSF52374 9 207 5.63E-136 T 29-03-2018 CHH28_RS09565 14141222415548c133dee77d062bed41 958 SUPERFAMILY SSF52374 428 672 5.63E-136 T 29-03-2018 CHH28_RS09565 14141222415548c133dee77d062bed41 958 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 7 949 20.976 T 29-03-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 CHH28_RS09565 14141222415548c133dee77d062bed41 958 Gene3D G3DSA:3.30.2320.20 843 916 3.8E-24 T 29-03-2018 CHH28_RS09565 14141222415548c133dee77d062bed41 958 Gene3D G3DSA:3.90.740.10 194 412 9.6E-51 T 29-03-2018 CHH28_RS09565 14141222415548c133dee77d062bed41 958 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 33 666 3.4E-199 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS09565 14141222415548c133dee77d062bed41 958 Pfam PF08264 Anticodon-binding domain of tRNA 710 863 2.5E-26 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CHH28_RS09565 14141222415548c133dee77d062bed41 958 Gene3D G3DSA:3.40.50.620 48 126 1.0E-25 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS09565 14141222415548c133dee77d062bed41 958 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 63 74 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS09565 14141222415548c133dee77d062bed41 958 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 552 565 3.3E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CHH28_RS09565 14141222415548c133dee77d062bed41 958 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 426 441 3.3E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CHH28_RS09565 14141222415548c133dee77d062bed41 958 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 586 595 3.3E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CHH28_RS09565 14141222415548c133dee77d062bed41 958 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 242 265 3.3E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CHH28_RS09565 14141222415548c133dee77d062bed41 958 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 56 67 3.3E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CHH28_RS09565 14141222415548c133dee77d062bed41 958 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 19 866 1.7E-273 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CHH28_RS09565 14141222415548c133dee77d062bed41 958 Gene3D G3DSA:3.40.50.620 413 665 6.4E-71 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS09565 14141222415548c133dee77d062bed41 958 SUPERFAMILY SSF50677 209 428 3.24E-37 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CHH28_RS09565 14141222415548c133dee77d062bed41 958 Gene3D G3DSA:1.10.730.10 666 842 8.2E-42 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS09565 14141222415548c133dee77d062bed41 958 SUPERFAMILY SSF47323 677 949 4.11E-76 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS09565 14141222415548c133dee77d062bed41 958 Pfam PF06827 Zinc finger found in FPG and IleRS 920 946 2.7E-8 T 29-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CHH28_RS14505 ab77655c09681a8e60dd4f0133ab613a 235 Gene3D G3DSA:3.10.610.10 37 166 9.7E-31 T 29-03-2018 CHH28_RS14505 ab77655c09681a8e60dd4f0133ab613a 235 SUPERFAMILY SSF54523 38 233 1.37E-27 T 29-03-2018 CHH28_RS14505 ab77655c09681a8e60dd4f0133ab613a 235 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 6 118 2.0E-25 T 29-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 CHH28_RS14505 ab77655c09681a8e60dd4f0133ab613a 235 Gene3D G3DSA:2.10.70.20 169 233 5.6E-4 T 29-03-2018 CHH28_RS14505 ab77655c09681a8e60dd4f0133ab613a 235 Pfam PF11612 Type II secretion system (T2SS), protein J 57 226 9.6E-28 T 29-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 Gene3D G3DSA:3.30.420.110 131 261 2.2E-27 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 Pfam PF01624 MutS domain I 7 118 9.7E-42 T 29-03-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 SUPERFAMILY SSF48334 266 562 2.49E-86 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 6 850 0.0 T 29-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 SUPERFAMILY SSF55271 4 114 3.66E-42 T 29-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 SMART SM00534 605 792 2.4E-115 T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 Pfam PF05190 MutS family domain IV 426 516 1.5E-31 T 29-03-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 Gene3D G3DSA:1.10.1420.10 406 533 7.4E-33 T 29-03-2018 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 SMART SM00533 282 589 1.6E-98 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 PIRSF PIRSF037677 2 835 1.2E-150 T 29-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 SUPERFAMILY SSF52540 567 795 1.21E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 Gene3D G3DSA:3.40.50.300 565 809 3.0E-37 T 29-03-2018 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 6 845 24.905 T 29-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 Pfam PF00488 MutS domain V 608 794 1.3E-83 T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 Gene3D G3DSA:1.10.1420.10 262 405 1.3E-34 T 29-03-2018 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 SUPERFAMILY SSF53150 113 265 2.62E-41 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 686 702 - T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 Pfam PF05188 MutS domain II 127 252 6.2E-25 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 Gene3D G3DSA:3.40.1170.10 2 130 3.7E-46 T 29-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CHH28_RS08785 26fe760dec9057b512299bc2b3b3426e 853 Pfam PF05192 MutS domain III 269 557 3.5E-36 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CHH28_RS15230 4b5eb0c522f297f56d38bc7035d09f8f 195 Gene3D G3DSA:1.10.530.10 20 195 6.0E-27 T 29-03-2018 CHH28_RS15230 4b5eb0c522f297f56d38bc7035d09f8f 195 Pfam PF01464 Transglycosylase SLT domain 85 178 4.6E-15 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CHH28_RS15230 4b5eb0c522f297f56d38bc7035d09f8f 195 SUPERFAMILY SSF53955 72 190 3.97E-29 T 29-03-2018 IPR023346 Lysozyme-like domain CHH28_RS10650 d9e155f5756959f6731dcec703d9d278 452 SUPERFAMILY SSF143548 17 155 2.35E-35 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CHH28_RS10650 d9e155f5756959f6731dcec703d9d278 452 Pfam PF03315 Serine dehydratase beta chain 4 153 1.3E-47 T 29-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CHH28_RS10650 d9e155f5756959f6731dcec703d9d278 452 Pfam PF03313 Serine dehydratase alpha chain 187 446 2.7E-95 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit CHH28_RS10650 d9e155f5756959f6731dcec703d9d278 452 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 1.5E-168 T 29-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CHH28_RS10650 d9e155f5756959f6731dcec703d9d278 452 Gene3D G3DSA:3.30.1330.90 12 156 1.6E-46 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CHH28_RS10650 d9e155f5756959f6731dcec703d9d278 452 Gene3D G3DSA:1.10.4100.10 236 432 8.3E-31 T 29-03-2018 CHH28_RS03930 8eecd9a9abf48d927ba47bd54bf38aff 193 Pfam PF13505 Outer membrane protein beta-barrel domain 12 188 4.2E-10 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel CHH28_RS03930 8eecd9a9abf48d927ba47bd54bf38aff 193 Gene3D G3DSA:2.40.160.20 10 193 6.0E-12 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS03930 8eecd9a9abf48d927ba47bd54bf38aff 193 SUPERFAMILY SSF56925 23 193 1.94E-13 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS19130 767581da069f5c299bea96eb1e500e54 420 Gene3D G3DSA:3.90.1150.10 276 419 1.0E-55 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS19130 767581da069f5c299bea96eb1e500e54 420 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 29-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CHH28_RS19130 767581da069f5c299bea96eb1e500e54 420 Gene3D G3DSA:3.40.640.10 37 275 5.4E-54 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS19130 767581da069f5c299bea96eb1e500e54 420 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 420 53.441 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CHH28_RS19130 767581da069f5c299bea96eb1e500e54 420 SUPERFAMILY SSF53383 6 419 1.28E-185 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS19130 767581da069f5c299bea96eb1e500e54 420 PIRSF PIRSF000412 1 420 2.1E-171 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CHH28_RS19130 767581da069f5c299bea96eb1e500e54 420 Pfam PF00464 Serine hydroxymethyltransferase 9 386 8.1E-183 T 29-03-2018 CHH28_RS17940 1f80141edf3c03ed7c019d09c90043d4 115 Gene3D G3DSA:3.40.30.10 1 114 2.4E-37 T 29-03-2018 CHH28_RS17940 1f80141edf3c03ed7c019d09c90043d4 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 112 1.0E-28 T 29-03-2018 IPR006504 Transcriptional regulator Spx/MgsR CHH28_RS17940 1f80141edf3c03ed7c019d09c90043d4 115 SUPERFAMILY SSF52833 1 113 3.2E-35 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS17940 1f80141edf3c03ed7c019d09c90043d4 115 Pfam PF03960 ArsC family 5 111 2.3E-15 T 29-03-2018 IPR006660 Arsenate reductase-like CHH28_RS04480 e12b88326ed04a8009f0e2a75202e3d1 210 SUPERFAMILY SSF55874 111 210 1.57E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04480 e12b88326ed04a8009f0e2a75202e3d1 210 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 112 210 3.4E-11 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04480 e12b88326ed04a8009f0e2a75202e3d1 210 SMART SM00387 108 210 1.3E-5 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04480 e12b88326ed04a8009f0e2a75202e3d1 210 PRINTS PR00344 Bacterial sensor protein C-terminal signature 197 210 1.1E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS04480 e12b88326ed04a8009f0e2a75202e3d1 210 PRINTS PR00344 Bacterial sensor protein C-terminal signature 168 186 1.1E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS04480 e12b88326ed04a8009f0e2a75202e3d1 210 PRINTS PR00344 Bacterial sensor protein C-terminal signature 142 156 1.1E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS04480 e12b88326ed04a8009f0e2a75202e3d1 210 Gene3D G3DSA:3.30.565.10 12 210 1.1E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS01410 3c1f82a771c187ca356fa53bbc92c11f 343 SUPERFAMILY SSF53067 3 123 7.12E-29 T 29-03-2018 CHH28_RS01410 3c1f82a771c187ca356fa53bbc92c11f 343 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 62.656 T 29-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CHH28_RS01410 3c1f82a771c187ca356fa53bbc92c11f 343 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 1.6E-133 T 29-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CHH28_RS01410 3c1f82a771c187ca356fa53bbc92c11f 343 Pfam PF00814 Glycoprotease family 24 311 9.9E-102 T 29-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CHH28_RS01410 3c1f82a771c187ca356fa53bbc92c11f 343 Gene3D G3DSA:3.30.420.40 145 293 5.0E-17 T 29-03-2018 CHH28_RS01410 3c1f82a771c187ca356fa53bbc92c11f 343 Gene3D G3DSA:3.30.420.40 1 144 5.2E-37 T 29-03-2018 CHH28_RS01410 3c1f82a771c187ca356fa53bbc92c11f 343 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 310 7.3E-119 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CHH28_RS01410 3c1f82a771c187ca356fa53bbc92c11f 343 SUPERFAMILY SSF53067 101 313 1.07E-44 T 29-03-2018 CHH28_RS01410 3c1f82a771c187ca356fa53bbc92c11f 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 1.3E-48 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CHH28_RS01410 3c1f82a771c187ca356fa53bbc92c11f 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.3E-48 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CHH28_RS01410 3c1f82a771c187ca356fa53bbc92c11f 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.3E-48 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CHH28_RS01410 3c1f82a771c187ca356fa53bbc92c11f 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.3E-48 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CHH28_RS01410 3c1f82a771c187ca356fa53bbc92c11f 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.3E-48 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CHH28_RS01410 3c1f82a771c187ca356fa53bbc92c11f 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.3E-48 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CHH28_RS17040 65547d2821fb78896f4b5b91d36a70d0 101 Pfam PF11804 Protein of unknown function (DUF3325) 3 91 1.5E-6 T 29-03-2018 IPR021762 Protein of unknown function DUF3325 CHH28_RS14110 f4c4653d733301d225fc31cebe79f173 99 Gene3D G3DSA:2.40.10.220 4 99 3.4E-16 T 29-03-2018 CHH28_RS14110 f4c4653d733301d225fc31cebe79f173 99 SUPERFAMILY SSF141371 6 85 1.39E-12 T 29-03-2018 CHH28_RS14110 f4c4653d733301d225fc31cebe79f173 99 Pfam PF07238 PilZ domain 10 94 2.3E-9 T 29-03-2018 IPR009875 PilZ domain GO:0035438 CHH28_RS06360 9699913dfd8f7940cfecc377b279cee6 274 Gene3D G3DSA:3.40.50.1980 20 124 4.0E-23 T 29-03-2018 CHH28_RS06360 9699913dfd8f7940cfecc377b279cee6 274 SUPERFAMILY SSF53807 20 265 1.49E-50 T 29-03-2018 CHH28_RS06360 9699913dfd8f7940cfecc377b279cee6 274 Gene3D G3DSA:3.40.50.1980 125 272 7.3E-23 T 29-03-2018 CHH28_RS06360 9699913dfd8f7940cfecc377b279cee6 274 Pfam PF01497 Periplasmic binding protein 23 244 1.3E-34 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CHH28_RS11310 42600a374f36daa1ed104b8304f432e0 400 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 1 396 29.126 T 29-03-2018 IPR017687 Outer membrane protein assembly factor BamB CHH28_RS11310 42600a374f36daa1ed104b8304f432e0 400 SUPERFAMILY SSF50998 30 349 7.85E-65 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CHH28_RS11310 42600a374f36daa1ed104b8304f432e0 400 Pfam PF13360 PQQ-like domain 71 300 2.4E-43 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CHH28_RS11310 42600a374f36daa1ed104b8304f432e0 400 SMART SM00564 310 342 670.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CHH28_RS11310 42600a374f36daa1ed104b8304f432e0 400 SMART SM00564 98 128 0.6 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CHH28_RS11310 42600a374f36daa1ed104b8304f432e0 400 SMART SM00564 270 301 0.5 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CHH28_RS11310 42600a374f36daa1ed104b8304f432e0 400 SMART SM00564 137 168 0.018 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CHH28_RS11310 42600a374f36daa1ed104b8304f432e0 400 SMART SM00564 58 89 8.3E-4 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CHH28_RS11310 42600a374f36daa1ed104b8304f432e0 400 SMART SM00564 182 213 12.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CHH28_RS11310 42600a374f36daa1ed104b8304f432e0 400 SMART SM00564 232 263 0.034 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CHH28_RS11310 42600a374f36daa1ed104b8304f432e0 400 Gene3D G3DSA:2.140.10.10 16 176 9.0E-23 T 29-03-2018 CHH28_RS11310 42600a374f36daa1ed104b8304f432e0 400 Gene3D G3DSA:2.140.10.10 208 390 7.0E-18 T 29-03-2018 CHH28_RS11310 42600a374f36daa1ed104b8304f432e0 400 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 3 350 1.7E-97 T 29-03-2018 IPR017687 Outer membrane protein assembly factor BamB CHH28_RS00890 38f10187bfb89981c24a3cc2e2c7bb48 223 SUPERFAMILY SSF161098 7 215 5.1E-48 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS00890 38f10187bfb89981c24a3cc2e2c7bb48 223 Gene3D G3DSA:1.10.3720.10 3 223 2.6E-37 T 29-03-2018 CHH28_RS00890 38f10187bfb89981c24a3cc2e2c7bb48 223 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 11 218 2.5E-73 T 29-03-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 CHH28_RS00890 38f10187bfb89981c24a3cc2e2c7bb48 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 219 7.6E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS04585 506353b3caeaf32b201668d8895dfb18 312 Pfam PF01218 Coproporphyrinogen III oxidase 9 312 2.5E-132 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CHH28_RS04585 506353b3caeaf32b201668d8895dfb18 312 Gene3D G3DSA:3.40.1500.10 2 312 3.7E-139 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CHH28_RS04585 506353b3caeaf32b201668d8895dfb18 312 PIRSF PIRSF000166 2 312 2.0E-126 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CHH28_RS04585 506353b3caeaf32b201668d8895dfb18 312 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 287 56.989 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CHH28_RS04585 506353b3caeaf32b201668d8895dfb18 312 PRINTS PR00073 Coprogen oxidase signature 31 47 1.2E-69 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CHH28_RS04585 506353b3caeaf32b201668d8895dfb18 312 PRINTS PR00073 Coprogen oxidase signature 272 298 1.2E-69 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CHH28_RS04585 506353b3caeaf32b201668d8895dfb18 312 PRINTS PR00073 Coprogen oxidase signature 244 271 1.2E-69 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CHH28_RS04585 506353b3caeaf32b201668d8895dfb18 312 PRINTS PR00073 Coprogen oxidase signature 168 197 1.2E-69 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CHH28_RS04585 506353b3caeaf32b201668d8895dfb18 312 PRINTS PR00073 Coprogen oxidase signature 96 120 1.2E-69 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CHH28_RS04585 506353b3caeaf32b201668d8895dfb18 312 PRINTS PR00073 Coprogen oxidase signature 131 153 1.2E-69 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CHH28_RS04585 506353b3caeaf32b201668d8895dfb18 312 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 172 196 - T 29-03-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CHH28_RS04585 506353b3caeaf32b201668d8895dfb18 312 SUPERFAMILY SSF102886 5 312 5.89E-135 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CHH28_RS18470 d7d16672a692a892070d3547028e1755 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 1.9E-89 T 29-03-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CHH28_RS18470 d7d16672a692a892070d3547028e1755 208 Gene3D G3DSA:3.40.50.2020 1 206 1.4E-59 T 29-03-2018 CHH28_RS18470 d7d16672a692a892070d3547028e1755 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 3.7E-65 T 29-03-2018 CHH28_RS18470 d7d16672a692a892070d3547028e1755 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 45.001 T 29-03-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CHH28_RS18470 d7d16672a692a892070d3547028e1755 208 SUPERFAMILY SSF53271 3 206 8.13E-67 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CHH28_RS16010 1c699c7617562b36c56948dedc7cafa9 301 SUPERFAMILY SSF103481 182 275 4.18E-12 T 29-03-2018 CHH28_RS16010 1c699c7617562b36c56948dedc7cafa9 301 SUPERFAMILY SSF103481 41 135 2.48E-12 T 29-03-2018 CHH28_RS16010 1c699c7617562b36c56948dedc7cafa9 301 Pfam PF00892 EamA-like transporter family 9 134 1.3E-16 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS16010 1c699c7617562b36c56948dedc7cafa9 301 Pfam PF00892 EamA-like transporter family 147 273 6.8E-16 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS05900 693e4d82fdfc743a317320068b11c45e 192 Gene3D G3DSA:1.20.950.20 14 192 3.7E-26 T 29-03-2018 CHH28_RS05900 693e4d82fdfc743a317320068b11c45e 192 SUPERFAMILY SSF81342 21 190 6.2E-27 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CHH28_RS05900 693e4d82fdfc743a317320068b11c45e 192 Pfam PF01292 Prokaryotic cytochrome b561 23 191 1.2E-23 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CHH28_RS13605 58dd5ca5bc08b275444f79dc84465310 177 Gene3D G3DSA:3.10.129.10 23 151 2.9E-28 T 29-03-2018 CHH28_RS13605 58dd5ca5bc08b275444f79dc84465310 177 SUPERFAMILY SSF54637 27 141 1.34E-26 T 29-03-2018 IPR029069 HotDog domain CHH28_RS13605 58dd5ca5bc08b275444f79dc84465310 177 Pfam PF13279 Thioesterase-like superfamily 33 139 6.7E-17 T 29-03-2018 CHH28_RS19700 f275c72785b37c2cac2ed94fc5dcc545 84 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 82 6.2E-30 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CHH28_RS19700 f275c72785b37c2cac2ed94fc5dcc545 84 Gene3D G3DSA:3.30.1070.10 1 82 1.5E-28 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CHH28_RS19700 f275c72785b37c2cac2ed94fc5dcc545 84 Pfam PF03776 Septum formation topological specificity factor MinE 14 81 2.3E-26 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CHH28_RS19700 f275c72785b37c2cac2ed94fc5dcc545 84 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 83 18.66 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CHH28_RS19700 f275c72785b37c2cac2ed94fc5dcc545 84 SUPERFAMILY SSF55229 33 83 2.09E-16 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CHH28_RS19670 8d016e673f2f6c1a5e1b8cbe16360106 404 SUPERFAMILY SSF53756 9 375 1.7E-76 T 29-03-2018 CHH28_RS19670 8d016e673f2f6c1a5e1b8cbe16360106 404 Pfam PF00534 Glycosyl transferases group 1 198 356 1.2E-26 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CHH28_RS19670 8d016e673f2f6c1a5e1b8cbe16360106 404 Pfam PF13439 Glycosyltransferase Family 4 19 187 3.0E-28 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CHH28_RS19670 8d016e673f2f6c1a5e1b8cbe16360106 404 Gene3D G3DSA:3.40.50.2000 197 360 2.4E-41 T 29-03-2018 CHH28_RS19670 8d016e673f2f6c1a5e1b8cbe16360106 404 Gene3D G3DSA:3.40.50.2000 14 196 7.0E-20 T 29-03-2018 CHH28_RS11025 6d9eab55d5662b44ab44de0f2b26e01a 236 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 118 2.5E-23 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CHH28_RS11025 6d9eab55d5662b44ab44de0f2b26e01a 236 Gene3D G3DSA:1.10.3720.10 1 229 3.2E-41 T 29-03-2018 CHH28_RS11025 6d9eab55d5662b44ab44de0f2b26e01a 236 SUPERFAMILY SSF161098 13 225 5.1E-42 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS11025 6d9eab55d5662b44ab44de0f2b26e01a 236 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 224 4.3E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS14870 ed2e18a2ecb196be1b68c69824956dc6 413 SUPERFAMILY SSF53901 3 251 3.91E-79 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS14870 ed2e18a2ecb196be1b68c69824956dc6 413 PIRSF PIRSF000447 1 413 1.5E-186 T 29-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CHH28_RS14870 ed2e18a2ecb196be1b68c69824956dc6 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 409 4.8E-191 T 29-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CHH28_RS14870 ed2e18a2ecb196be1b68c69824956dc6 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 246 5.1E-61 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CHH28_RS14870 ed2e18a2ecb196be1b68c69824956dc6 413 Gene3D G3DSA:3.40.47.10 1 258 1.7E-82 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS14870 ed2e18a2ecb196be1b68c69824956dc6 413 SUPERFAMILY SSF53901 214 411 5.76E-72 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS14870 ed2e18a2ecb196be1b68c69824956dc6 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 1.5E-36 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CHH28_RS14870 ed2e18a2ecb196be1b68c69824956dc6 413 SMART SM00825 Beta-ketoacyl synthase 6 413 4.0E-17 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CHH28_RS14870 ed2e18a2ecb196be1b68c69824956dc6 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site CHH28_RS14870 ed2e18a2ecb196be1b68c69824956dc6 413 Gene3D G3DSA:3.40.47.10 262 413 5.4E-51 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS12430 c8ce1f82c2cc404a1ab6747dc15ce5af 636 SUPERFAMILY SSF56935 51 636 3.66E-43 T 29-03-2018 CHH28_RS12430 c8ce1f82c2cc404a1ab6747dc15ce5af 636 Gene3D G3DSA:2.170.130.10 19 145 1.6E-10 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS12430 c8ce1f82c2cc404a1ab6747dc15ce5af 636 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 135 5.6E-9 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS09405 b998850a12d2e6dd5b9a2b29eb206446 560 Gene3D G3DSA:1.10.3210.10 7 251 6.9E-10 T 29-03-2018 CHH28_RS09405 b998850a12d2e6dd5b9a2b29eb206446 560 SUPERFAMILY SSF109604 18 238 4.71E-13 T 29-03-2018 CHH28_RS09405 b998850a12d2e6dd5b9a2b29eb206446 560 Gene3D G3DSA:3.30.450.40 383 560 3.4E-8 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS00320 4c2681ca497ff4318e4a975950dace5f 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 24.928 T 29-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CHH28_RS00320 4c2681ca497ff4318e4a975950dace5f 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 3.9E-6 T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CHH28_RS00320 4c2681ca497ff4318e4a975950dace5f 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CHH28_RS00320 4c2681ca497ff4318e4a975950dace5f 360 Pfam PF00953 Glycosyl transferase family 4 99 284 6.0E-38 T 29-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CHH28_RS00320 4c2681ca497ff4318e4a975950dace5f 360 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 9.0E-5 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS00320 4c2681ca497ff4318e4a975950dace5f 360 PRINTS PR00173 Glutamate-aspartate symporter signature 166 188 9.0E-5 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS00320 4c2681ca497ff4318e4a975950dace5f 360 PRINTS PR00173 Glutamate-aspartate symporter signature 345 360 9.0E-5 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS00320 4c2681ca497ff4318e4a975950dace5f 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CHH28_RS00320 4c2681ca497ff4318e4a975950dace5f 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 1.3E-142 T 29-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CHH28_RS18405 ab87ad121b194586719b7a9c3c028d41 444 SUPERFAMILY SSF109604 22 188 9.11E-69 T 29-03-2018 CHH28_RS18405 ab87ad121b194586719b7a9c3c028d41 444 SUPERFAMILY SSF109604 223 432 9.11E-69 T 29-03-2018 CHH28_RS18405 ab87ad121b194586719b7a9c3c028d41 444 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 25 435 2.2E-105 T 29-03-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 CHH28_RS18405 ab87ad121b194586719b7a9c3c028d41 444 Gene3D G3DSA:1.10.3210.10 1 231 1.9E-64 T 29-03-2018 CHH28_RS18405 ab87ad121b194586719b7a9c3c028d41 444 Pfam PF13286 Phosphohydrolase-associated domain 332 432 2.8E-5 T 29-03-2018 IPR026875 Phosphohydrolase-associated domain CHH28_RS18405 ab87ad121b194586719b7a9c3c028d41 444 Pfam PF01966 HD domain 62 131 3.5E-8 T 29-03-2018 IPR006674 HD domain CHH28_RS18405 ab87ad121b194586719b7a9c3c028d41 444 Gene3D G3DSA:1.10.3410.10 238 350 2.6E-22 T 29-03-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain CHH28_RS18405 ab87ad121b194586719b7a9c3c028d41 444 SMART SM00471 58 254 8.5E-8 T 29-03-2018 IPR003607 HD/PDEase domain CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 SUPERFAMILY SSF55785 46 158 1.34E-11 T 29-03-2018 IPR000014 PAS domain CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 SMART SM00091 161 227 3.1E-5 T 29-03-2018 IPR000014 PAS domain CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 SMART SM00091 35 101 0.0034 T 29-03-2018 IPR000014 PAS domain CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 SMART SM00091 288 357 3.1E-4 T 29-03-2018 IPR000014 PAS domain CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 SUPERFAMILY SSF55073 433 584 3.34E-40 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 SMART SM00267 417 587 3.0E-39 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 Pfam PF00990 Diguanylate cyclase, GGDEF domain 430 583 3.4E-36 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 Gene3D G3DSA:3.30.450.20 286 421 2.3E-28 T 29-03-2018 CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 SUPERFAMILY SSF55785 273 401 7.15E-19 T 29-03-2018 IPR000014 PAS domain CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 Pfam PF00989 PAS fold 38 145 1.5E-5 T 29-03-2018 IPR013767 PAS fold GO:0006355 CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 Gene3D G3DSA:3.30.70.270 422 587 1.4E-42 T 29-03-2018 CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 SMART SM00086 234 276 3.3E-9 T 29-03-2018 IPR001610 PAC motif CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 SMART SM00086 361 403 1.4E-6 T 29-03-2018 IPR001610 PAC motif CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 SMART SM00086 109 149 270.0 T 29-03-2018 IPR001610 PAC motif CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 160 281 1.9E-21 T 29-03-2018 IPR000014 PAS domain CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 284 408 5.8E-13 T 29-03-2018 IPR000014 PAS domain CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 39 156 7.8E-13 T 29-03-2018 IPR000014 PAS domain CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 Gene3D G3DSA:3.30.450.20 32 156 1.1E-13 T 29-03-2018 CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 Gene3D G3DSA:3.30.450.20 157 285 2.1E-26 T 29-03-2018 CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 SUPERFAMILY SSF55785 166 277 1.54E-21 T 29-03-2018 IPR000014 PAS domain CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 424 584 5.5E-37 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 Pfam PF08447 PAS fold 312 396 1.0E-13 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CHH28_RS13565 08df0ecc29d58833f1692cb70f732199 589 Pfam PF08447 PAS fold 184 268 5.2E-12 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CHH28_RS18130 97c63eb33935f34dca7b86f774900d46 386 Gene3D G3DSA:2.40.50.100 170 358 6.1E-9 T 29-03-2018 CHH28_RS18130 97c63eb33935f34dca7b86f774900d46 386 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 277 3.7E-23 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CHH28_RS18130 97c63eb33935f34dca7b86f774900d46 386 SUPERFAMILY SSF111369 71 283 6.15E-31 T 29-03-2018 CHH28_RS18130 97c63eb33935f34dca7b86f774900d46 386 Gene3D G3DSA:1.10.287.470 132 169 6.5E-4 T 29-03-2018 CHH28_RS18130 97c63eb33935f34dca7b86f774900d46 386 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 55 358 8.3E-47 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CHH28_RS18130 97c63eb33935f34dca7b86f774900d46 386 Gene3D G3DSA:2.40.50.100 79 131 7.8E-11 T 29-03-2018 CHH28_RS00725 506d403a8a46c01cfbb417a6da42e957 605 SUPERFAMILY SSF52540 200 464 9.11E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS00725 506d403a8a46c01cfbb417a6da42e957 605 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 450 459 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CHH28_RS00725 506d403a8a46c01cfbb417a6da42e957 605 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 4 603 42.29 T 29-03-2018 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CHH28_RS00725 506d403a8a46c01cfbb417a6da42e957 605 Gene3D G3DSA:1.10.1140.10 470 578 5.5E-18 T 29-03-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CHH28_RS00725 506d403a8a46c01cfbb417a6da42e957 605 SUPERFAMILY SSF47917 472 555 7.85E-7 T 29-03-2018 CHH28_RS00725 506d403a8a46c01cfbb417a6da42e957 605 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 237 459 2.2E-75 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CHH28_RS00725 506d403a8a46c01cfbb417a6da42e957 605 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 101 213 5.4E-34 T 29-03-2018 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CHH28_RS00725 506d403a8a46c01cfbb417a6da42e957 605 Gene3D G3DSA:3.40.50.300 87 466 3.1E-84 T 29-03-2018 CHH28_RS14130 619bb22d6f1897a6360759c8559c226f 97 Pfam PF14333 Domain of unknown function (DUF4389) 11 85 9.4E-24 T 29-03-2018 IPR025498 Protein of unknown function DUF4389 CHH28_RS17495 3f04baa79748e47e3e10ff4fbd697204 262 SUPERFAMILY SSF51215 6 129 3.79E-10 T 29-03-2018 CHH28_RS17495 3f04baa79748e47e3e10ff4fbd697204 262 Gene3D G3DSA:1.10.10.60 158 211 1.1E-9 T 29-03-2018 CHH28_RS17495 3f04baa79748e47e3e10ff4fbd697204 262 Gene3D G3DSA:2.60.120.280 1 148 5.6E-14 T 29-03-2018 CHH28_RS17495 3f04baa79748e47e3e10ff4fbd697204 262 SMART SM00342 175 258 2.8E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS17495 3f04baa79748e47e3e10ff4fbd697204 262 Pfam PF02311 AraC-like ligand binding domain 16 124 3.1E-7 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CHH28_RS17495 3f04baa79748e47e3e10ff4fbd697204 262 SUPERFAMILY SSF46689 159 209 1.43E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS17495 3f04baa79748e47e3e10ff4fbd697204 262 SUPERFAMILY SSF46689 212 260 2.51E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS17495 3f04baa79748e47e3e10ff4fbd697204 262 Pfam PF12833 Helix-turn-helix domain 181 260 2.7E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS17495 3f04baa79748e47e3e10ff4fbd697204 262 Gene3D G3DSA:1.10.10.60 212 262 1.1E-15 T 29-03-2018 CHH28_RS02400 b5196737262efeac16bcef40ae47644e 589 SUPERFAMILY SSF47384 323 403 8.83E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS02400 b5196737262efeac16bcef40ae47644e 589 Gene3D G3DSA:3.30.565.10 398 587 2.0E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS02400 b5196737262efeac16bcef40ae47644e 589 SUPERFAMILY SSF55874 392 585 3.27E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS02400 b5196737262efeac16bcef40ae47644e 589 Gene3D G3DSA:1.10.287.130 330 397 4.6E-8 T 29-03-2018 CHH28_RS02400 b5196737262efeac16bcef40ae47644e 589 Pfam PF00512 His Kinase A (phospho-acceptor) domain 347 401 1.7E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS02400 b5196737262efeac16bcef40ae47644e 589 SMART SM00388 339 403 2.0E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS02400 b5196737262efeac16bcef40ae47644e 589 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 567 7.7E-5 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS02400 b5196737262efeac16bcef40ae47644e 589 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 530 7.7E-5 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS02400 b5196737262efeac16bcef40ae47644e 589 SMART SM00387 459 587 1.9E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS02400 b5196737262efeac16bcef40ae47644e 589 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 459 586 1.2E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS01595 e7024d58adf97ad1f26b8d7a36abc4f3 218 Pfam PF10277 Frag1/DRAM/Sfk1 family 7 211 4.2E-11 T 29-03-2018 IPR019402 Frag1/DRAM/Sfk1 CHH28_RS04255 73900e29bf06bf27aa2e395c5f7660d7 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 255 1.8E-37 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS04255 73900e29bf06bf27aa2e395c5f7660d7 256 SMART SM00062 28 256 9.7E-17 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS04255 73900e29bf06bf27aa2e395c5f7660d7 256 SUPERFAMILY SSF53850 29 256 5.98E-45 T 29-03-2018 CHH28_RS04255 73900e29bf06bf27aa2e395c5f7660d7 256 Gene3D G3DSA:3.40.190.10 19 182 1.5E-26 T 29-03-2018 CHH28_RS04255 73900e29bf06bf27aa2e395c5f7660d7 256 Gene3D G3DSA:3.40.190.10 183 255 1.4E-5 T 29-03-2018 CHH28_RS08555 c684d960108e231604ba6f8777f1aefb 484 Gene3D G3DSA:3.90.1300.10 1 481 3.7E-172 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CHH28_RS08555 c684d960108e231604ba6f8777f1aefb 484 ProSitePatterns PS00571 Amidases signature. 149 180 - T 29-03-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 CHH28_RS08555 c684d960108e231604ba6f8777f1aefb 484 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 13 474 1.0E-180 T 29-03-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CHH28_RS08555 c684d960108e231604ba6f8777f1aefb 484 Pfam PF01425 Amidase 22 463 1.4E-158 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CHH28_RS08555 c684d960108e231604ba6f8777f1aefb 484 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 474 90.218 T 29-03-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CHH28_RS08555 c684d960108e231604ba6f8777f1aefb 484 SUPERFAMILY SSF75304 2 480 1.57E-166 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CHH28_RS04370 182a12113ed3da07ef39191264b198b8 257 SUPERFAMILY SSF53850 19 239 2.92E-28 T 29-03-2018 CHH28_RS04370 182a12113ed3da07ef39191264b198b8 257 Gene3D G3DSA:3.40.190.10 18 123 1.1E-10 T 29-03-2018 CHH28_RS04370 182a12113ed3da07ef39191264b198b8 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 22 240 1.5E-18 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS04370 182a12113ed3da07ef39191264b198b8 257 Gene3D G3DSA:3.40.190.10 128 249 8.9E-11 T 29-03-2018 CHH28_RS04370 182a12113ed3da07ef39191264b198b8 257 SMART SM00062 21 242 8.0E-6 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS19005 74245a9fd73cd0ab13adf4dd12c1e733 375 Gene3D G3DSA:3.40.630.20 126 374 1.2E-37 T 29-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like CHH28_RS19005 74245a9fd73cd0ab13adf4dd12c1e733 375 SUPERFAMILY SSF53182 130 365 2.35E-30 T 29-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like CHH28_RS02110 9be32754f7c080ed273c0ff05e288c7d 306 Gene3D G3DSA:3.40.50.1820 35 264 3.8E-27 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS02110 9be32754f7c080ed273c0ff05e288c7d 306 Pfam PF01738 Dienelactone hydrolase family 63 264 7.9E-14 T 29-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 CHH28_RS02110 9be32754f7c080ed273c0ff05e288c7d 306 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 133 163 - T 29-03-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 CHH28_RS02110 9be32754f7c080ed273c0ff05e288c7d 306 SUPERFAMILY SSF53474 29 260 4.41E-29 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 Gene3D G3DSA:3.40.50.880 5 222 7.0E-49 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 Pfam PF02540 NAD synthase 215 293 1.5E-8 T 29-03-2018 IPR022310 NAD/GMP synthase CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 Pfam PF00958 GMP synthase C terminal domain 434 525 3.4E-42 T 29-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 Pfam PF00117 Glutamine amidotransferase class-I 12 201 2.2E-39 T 29-03-2018 IPR017926 Glutamine amidotransferase CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 SUPERFAMILY SSF52402 198 421 5.51E-58 T 29-03-2018 CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 Gene3D G3DSA:3.40.50.620 223 401 6.4E-34 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 9.8E-7 T 29-03-2018 CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 9.8E-7 T 29-03-2018 CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 PRINTS PR00096 Glutamine amidotransferase superfamily signature 178 191 9.8E-7 T 29-03-2018 CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 8.6E-5 T 29-03-2018 CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 8.6E-5 T 29-03-2018 CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 8.6E-5 T 29-03-2018 CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 526 2.8E-151 T 29-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 SUPERFAMILY SSF52317 5 205 6.8E-56 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 SUPERFAMILY SSF54810 406 526 1.44E-50 T 29-03-2018 CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.3E-5 T 29-03-2018 CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 PRINTS PR00097 Anthranilate synthase component II signature 178 191 1.3E-5 T 29-03-2018 CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.3E-5 T 29-03-2018 CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 8.9E-77 T 29-03-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 526 55.784 T 29-03-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 CHH28_RS15360 9a7861364350696a1f936b312f9c14f3 526 Gene3D G3DSA:3.30.300.10 402 526 3.3E-52 T 29-03-2018 CHH28_RS11860 b13a543824b47aae295b9b6a7728bfab 644 Gene3D G3DSA:1.10.287.950 80 425 1.9E-14 T 29-03-2018 CHH28_RS11860 b13a543824b47aae295b9b6a7728bfab 644 Gene3D G3DSA:1.10.287.950 426 593 8.4E-44 T 29-03-2018 CHH28_RS11860 b13a543824b47aae295b9b6a7728bfab 644 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 433 587 3.9E-31 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS11860 b13a543824b47aae295b9b6a7728bfab 644 SMART SM01358 37 290 2.5E-30 T 29-03-2018 IPR032255 Helical bimodular sensor domain CHH28_RS11860 b13a543824b47aae295b9b6a7728bfab 644 SMART SM00283 374 607 5.8E-63 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS11860 b13a543824b47aae295b9b6a7728bfab 644 SUPERFAMILY SSF58104 350 608 7.06E-57 T 29-03-2018 CHH28_RS02330 2d4448c4a193eb641ec84cfcd8cd373d 421 Gene3D G3DSA:3.90.1150.10 301 416 1.1E-19 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS02330 2d4448c4a193eb641ec84cfcd8cd373d 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 415 1.6E-144 T 29-03-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855 CHH28_RS02330 2d4448c4a193eb641ec84cfcd8cd373d 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 231 267 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS02330 2d4448c4a193eb641ec84cfcd8cd373d 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 410 1.8E-191 T 29-03-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855 CHH28_RS02330 2d4448c4a193eb641ec84cfcd8cd373d 421 SUPERFAMILY SSF53383 7 410 7.76E-105 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS02330 2d4448c4a193eb641ec84cfcd8cd373d 421 PIRSF PIRSF000521 171 412 1.4E-32 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS02330 2d4448c4a193eb641ec84cfcd8cd373d 421 PIRSF PIRSF000521 89 164 0.23 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS02330 2d4448c4a193eb641ec84cfcd8cd373d 421 PIRSF PIRSF000521 1 128 0.36 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS02330 2d4448c4a193eb641ec84cfcd8cd373d 421 Pfam PF00202 Aminotransferase class-III 18 409 1.0E-78 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS02330 2d4448c4a193eb641ec84cfcd8cd373d 421 Gene3D G3DSA:3.40.640.10 45 300 1.9E-63 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS17270 e6301d58c96c8c37283d0f0e5e4dd69e 565 Pfam PF02272 DHHA1 domain 311 441 3.0E-23 T 29-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CHH28_RS17270 e6301d58c96c8c37283d0f0e5e4dd69e 565 Gene3D G3DSA:3.90.1640.10 46 237 1.8E-19 T 29-03-2018 CHH28_RS17270 e6301d58c96c8c37283d0f0e5e4dd69e 565 Pfam PF01368 DHH family 70 199 1.0E-10 T 29-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CHH28_RS17270 e6301d58c96c8c37283d0f0e5e4dd69e 565 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 17 559 2.7E-155 T 29-03-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 CHH28_RS17270 e6301d58c96c8c37283d0f0e5e4dd69e 565 SUPERFAMILY SSF64182 42 455 1.7E-114 T 29-03-2018 CHH28_RS18775 da7d3518c9dffea60111cd3c7539f163 349 SUPERFAMILY SSF52738 157 344 2.75E-57 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS18775 da7d3518c9dffea60111cd3c7539f163 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 5 346 36.434 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS18775 da7d3518c9dffea60111cd3c7539f163 349 SMART SM00448 5 120 2.2E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS18775 da7d3518c9dffea60111cd3c7539f163 349 Gene3D G3DSA:3.40.50.180 157 349 1.1E-63 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS18775 da7d3518c9dffea60111cd3c7539f163 349 Gene3D G3DSA:3.40.50.2300 1 156 2.9E-31 T 29-03-2018 CHH28_RS18775 da7d3518c9dffea60111cd3c7539f163 349 Pfam PF00072 Response regulator receiver domain 7 113 3.8E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS18775 da7d3518c9dffea60111cd3c7539f163 349 Pfam PF01339 CheB methylesterase 162 340 1.6E-51 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS18775 da7d3518c9dffea60111cd3c7539f163 349 PIRSF PIRSF000876 2 349 1.6E-123 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS18775 da7d3518c9dffea60111cd3c7539f163 349 SUPERFAMILY SSF52172 3 124 1.08E-29 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS10845 41d68fb4cd77c6c708db57ccfd511211 132 Gene3D G3DSA:3.90.350.10 1 118 3.7E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS10845 41d68fb4cd77c6c708db57ccfd511211 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS01720 e0ac036618d8efecff49813a100e4a6c 248 SUPERFAMILY SSF51366 1 239 1.18E-72 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CHH28_RS01720 e0ac036618d8efecff49813a100e4a6c 248 Pfam PF00977 Histidine biosynthesis protein 3 231 9.1E-79 T 29-03-2018 IPR006062 Histidine biosynthesis GO:0000105 CHH28_RS01720 e0ac036618d8efecff49813a100e4a6c 248 Gene3D G3DSA:3.20.20.70 1 244 4.8E-57 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS01720 e0ac036618d8efecff49813a100e4a6c 248 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 235 1.6E-79 T 29-03-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CHH28_RS01720 e0ac036618d8efecff49813a100e4a6c 248 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 239 36.156 T 29-03-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CHH28_RS05575 99237d02671ba2e6eafc83c933dd63e5 460 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 78 92 - T 29-03-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CHH28_RS05575 99237d02671ba2e6eafc83c933dd63e5 460 SMART SM00996 6 459 6.4E-280 T 29-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CHH28_RS05575 99237d02671ba2e6eafc83c933dd63e5 460 Gene3D G3DSA:3.40.50.1480 209 433 4.5E-63 T 29-03-2018 CHH28_RS05575 99237d02671ba2e6eafc83c933dd63e5 460 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 2 452 44.361 T 29-03-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508 CHH28_RS05575 99237d02671ba2e6eafc83c933dd63e5 460 SUPERFAMILY SSF52283 373 460 2.38E-108 T 29-03-2018 CHH28_RS05575 99237d02671ba2e6eafc83c933dd63e5 460 SUPERFAMILY SSF52283 4 195 2.38E-108 T 29-03-2018 CHH28_RS05575 99237d02671ba2e6eafc83c933dd63e5 460 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 196 372 2.4E-59 T 29-03-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CHH28_RS05575 99237d02671ba2e6eafc83c933dd63e5 460 Gene3D G3DSA:3.40.50.1480 147 208 2.9E-23 T 29-03-2018 CHH28_RS05575 99237d02671ba2e6eafc83c933dd63e5 460 Gene3D G3DSA:3.40.50.1480 1 146 2.3E-71 T 29-03-2018 CHH28_RS05575 99237d02671ba2e6eafc83c933dd63e5 460 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 218 235 - T 29-03-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CHH28_RS05575 99237d02671ba2e6eafc83c933dd63e5 460 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 7 452 7.7E-157 T 29-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CHH28_RS05575 99237d02671ba2e6eafc83c933dd63e5 460 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 6 146 1.2E-72 T 29-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CHH28_RS05575 99237d02671ba2e6eafc83c933dd63e5 460 PIRSF PIRSF001109 1 460 4.4E-182 T 29-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CHH28_RS05575 99237d02671ba2e6eafc83c933dd63e5 460 SUPERFAMILY SSF51735 196 373 1.29E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS05575 99237d02671ba2e6eafc83c933dd63e5 460 SMART SM00997 196 372 5.3E-87 T 29-03-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CHH28_RS17715 c30420a208acb5a97b43c88441756b2f 206 SUPERFAMILY SSF55821 2 204 1.83E-61 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CHH28_RS17715 c30420a208acb5a97b43c88441756b2f 206 Gene3D G3DSA:3.90.870.10 1 206 1.9E-57 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CHH28_RS17715 c30420a208acb5a97b43c88441756b2f 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 2.6E-59 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 CHH28_RS17715 c30420a208acb5a97b43c88441756b2f 206 Pfam PF01300 Telomere recombination 22 198 4.4E-41 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 CHH28_RS08835 ec515c456886bcb47ae35ddc5cdd8f25 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 198.565 T 29-03-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CHH28_RS08835 ec515c456886bcb47ae35ddc5cdd8f25 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 651 696 2.4E-16 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CHH28_RS08835 ec515c456886bcb47ae35ddc5cdd8f25 875 SUPERFAMILY SSF101353 254 441 1.57E-61 T 29-03-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 CHH28_RS08835 ec515c456886bcb47ae35ddc5cdd8f25 875 SUPERFAMILY SSF55681 2 253 2.73E-106 T 29-03-2018 CHH28_RS08835 ec515c456886bcb47ae35ddc5cdd8f25 875 SMART SM00863 651 696 9.9E-19 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CHH28_RS08835 ec515c456886bcb47ae35ddc5cdd8f25 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 854 0.0 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CHH28_RS08835 ec515c456886bcb47ae35ddc5cdd8f25 875 SUPERFAMILY SSF50447 452 550 5.3E-17 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CHH28_RS08835 ec515c456886bcb47ae35ddc5cdd8f25 875 Pfam PF02272 DHHA1 domain 734 870 1.7E-24 T 29-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CHH28_RS08835 ec515c456886bcb47ae35ddc5cdd8f25 875 SUPERFAMILY SSF55186 550 710 6.54E-48 T 29-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CHH28_RS08835 ec515c456886bcb47ae35ddc5cdd8f25 875 Pfam PF01411 tRNA synthetases class II (A) 5 553 9.8E-221 T 29-03-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CHH28_RS08835 ec515c456886bcb47ae35ddc5cdd8f25 875 Gene3D G3DSA:3.30.980.10 551 713 2.5E-43 T 29-03-2018 CHH28_RS08835 ec515c456886bcb47ae35ddc5cdd8f25 875 Gene3D G3DSA:3.30.930.10 1 250 2.0E-113 T 29-03-2018 CHH28_RS08835 ec515c456886bcb47ae35ddc5cdd8f25 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 280 296 3.0E-31 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CHH28_RS08835 ec515c456886bcb47ae35ddc5cdd8f25 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 3.0E-31 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CHH28_RS08835 ec515c456886bcb47ae35ddc5cdd8f25 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 3.0E-31 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CHH28_RS08835 ec515c456886bcb47ae35ddc5cdd8f25 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 304 317 3.0E-31 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CHH28_RS08835 ec515c456886bcb47ae35ddc5cdd8f25 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 3.0E-31 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CHH28_RS04905 a64de617a7780a57bf54ff7173fa5637 88 Gene3D G3DSA:3.30.70.930 1 76 1.4E-11 T 29-03-2018 IPR029756 MTH1187/YkoF-like CHH28_RS04905 a64de617a7780a57bf54ff7173fa5637 88 SUPERFAMILY SSF89957 1 78 7.2E-18 T 29-03-2018 IPR029756 MTH1187/YkoF-like CHH28_RS04905 a64de617a7780a57bf54ff7173fa5637 88 Pfam PF07615 YKOF-related Family 5 56 1.5E-5 T 29-03-2018 IPR011522 Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative CHH28_RS07795 e035bb67ba7d53ec8792bca7550f380d 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.9E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07795 e035bb67ba7d53ec8792bca7550f380d 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.9E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07795 e035bb67ba7d53ec8792bca7550f380d 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.9E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07795 e035bb67ba7d53ec8792bca7550f380d 278 Pfam PF00106 short chain dehydrogenase 8 192 4.5E-50 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07795 e035bb67ba7d53ec8792bca7550f380d 278 SUPERFAMILY SSF51735 3 273 9.42E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS07795 e035bb67ba7d53ec8792bca7550f380d 278 Gene3D G3DSA:3.40.50.720 2 278 8.0E-60 T 29-03-2018 CHH28_RS07795 e035bb67ba7d53ec8792bca7550f380d 278 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CHH28_RS07795 e035bb67ba7d53ec8792bca7550f380d 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 7.0E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07795 e035bb67ba7d53ec8792bca7550f380d 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 7.0E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07795 e035bb67ba7d53ec8792bca7550f380d 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 7.0E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07795 e035bb67ba7d53ec8792bca7550f380d 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.0E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07795 e035bb67ba7d53ec8792bca7550f380d 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.0E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07795 e035bb67ba7d53ec8792bca7550f380d 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 7.0E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS09990 61162f0ddd7e4c4366eb5e22e3f2ee17 298 Gene3D G3DSA:3.40.190.10 88 173 3.1E-15 T 29-03-2018 CHH28_RS09990 61162f0ddd7e4c4366eb5e22e3f2ee17 298 SUPERFAMILY SSF46785 1 87 1.15E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS09990 61162f0ddd7e4c4366eb5e22e3f2ee17 298 SUPERFAMILY SSF53850 88 295 1.21E-41 T 29-03-2018 CHH28_RS09990 61162f0ddd7e4c4366eb5e22e3f2ee17 298 Pfam PF03466 LysR substrate binding domain 88 294 9.4E-41 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS09990 61162f0ddd7e4c4366eb5e22e3f2ee17 298 Gene3D G3DSA:3.40.190.10 174 262 3.9E-19 T 29-03-2018 CHH28_RS09990 61162f0ddd7e4c4366eb5e22e3f2ee17 298 Gene3D G3DSA:1.10.10.10 1 83 4.0E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS09990 61162f0ddd7e4c4366eb5e22e3f2ee17 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.1E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS13455 ce30ba65a1414ce7f385a468e84ca23b 195 Pfam PF00196 Bacterial regulatory proteins, luxR family 135 187 2.0E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS13455 ce30ba65a1414ce7f385a468e84ca23b 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 165 2.1E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS13455 ce30ba65a1414ce7f385a468e84ca23b 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 177 2.1E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS13455 ce30ba65a1414ce7f385a468e84ca23b 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 135 149 2.1E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS13455 ce30ba65a1414ce7f385a468e84ca23b 195 Pfam PF00072 Response regulator receiver domain 4 112 4.5E-11 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13455 ce30ba65a1414ce7f385a468e84ca23b 195 SUPERFAMILY SSF52172 1 118 3.42E-11 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS13455 ce30ba65a1414ce7f385a468e84ca23b 195 SMART SM00421 132 189 4.0E-16 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS13455 ce30ba65a1414ce7f385a468e84ca23b 195 Gene3D G3DSA:3.40.50.2300 1 123 9.6E-13 T 29-03-2018 CHH28_RS13455 ce30ba65a1414ce7f385a468e84ca23b 195 SMART SM00448 1 112 0.0026 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13455 ce30ba65a1414ce7f385a468e84ca23b 195 Gene3D G3DSA:1.10.10.10 129 195 9.8E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS13455 ce30ba65a1414ce7f385a468e84ca23b 195 SUPERFAMILY SSF46894 126 194 7.14E-16 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CHH28_RS17510 59ba119480a30c4485a6e7e087393fe0 236 SUPERFAMILY SSF52540 20 214 6.86E-21 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS17510 59ba119480a30c4485a6e7e087393fe0 236 Gene3D G3DSA:3.40.50.300 2 167 1.4E-9 T 29-03-2018 CHH28_RS17510 59ba119480a30c4485a6e7e087393fe0 236 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 10 234 1.5E-80 T 29-03-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 CHH28_RS17510 59ba119480a30c4485a6e7e087393fe0 236 Pfam PF00308 Bacterial dnaA protein 20 214 4.3E-17 T 29-03-2018 IPR013317 Chromosomal replication initiator protein DnaA CHH28_RS17510 59ba119480a30c4485a6e7e087393fe0 236 Gene3D G3DSA:1.10.8.60 171 236 3.5E-9 T 29-03-2018 CHH28_RS02825 9b084dc340796e6c137470b0f55b4d5f 191 Gene3D G3DSA:1.20.120.330 16 158 2.3E-15 T 29-03-2018 CHH28_RS00540 4d3a1a74301d3107e9d1b1c6ee33b726 267 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 2 266 1.1E-93 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CHH28_RS00540 4d3a1a74301d3107e9d1b1c6ee33b726 267 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 266 34.304 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CHH28_RS00540 4d3a1a74301d3107e9d1b1c6ee33b726 267 PIRSF PIRSF000161 1 267 1.7E-86 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CHH28_RS00540 4d3a1a74301d3107e9d1b1c6ee33b726 267 SUPERFAMILY SSF55347 128 237 6.1E-38 T 29-03-2018 CHH28_RS00540 4d3a1a74301d3107e9d1b1c6ee33b726 267 Gene3D G3DSA:3.30.360.10 142 235 1.7E-35 T 29-03-2018 CHH28_RS00540 4d3a1a74301d3107e9d1b1c6ee33b726 267 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 129 265 3.0E-43 T 29-03-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CHH28_RS00540 4d3a1a74301d3107e9d1b1c6ee33b726 267 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 151 168 - T 29-03-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CHH28_RS00540 4d3a1a74301d3107e9d1b1c6ee33b726 267 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 126 2.2E-35 T 29-03-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CHH28_RS00540 4d3a1a74301d3107e9d1b1c6ee33b726 267 SUPERFAMILY SSF51735 237 266 2.69E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS00540 4d3a1a74301d3107e9d1b1c6ee33b726 267 SUPERFAMILY SSF51735 1 127 2.69E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS00540 4d3a1a74301d3107e9d1b1c6ee33b726 267 Gene3D G3DSA:3.40.50.720 1 141 3.2E-24 T 29-03-2018 CHH28_RS15205 136b95f50ea2af7f50aa0f5e3778afa8 607 SUPERFAMILY SSF51126 77 354 3.57E-31 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CHH28_RS15205 136b95f50ea2af7f50aa0f5e3778afa8 607 SUPERFAMILY SSF51126 396 416 3.57E-31 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CHH28_RS15205 136b95f50ea2af7f50aa0f5e3778afa8 607 TIGRFAM TIGR03805 beta_helix_1: parallel beta-helix repeat-containing protein 94 457 9.5E-103 T 29-03-2018 IPR022442 Parallel beta-helix repeat-containing domain CHH28_RS15205 136b95f50ea2af7f50aa0f5e3778afa8 607 Gene3D G3DSA:3.30.750.60 42 133 0.0033 T 29-03-2018 IPR024429 Endosialidase, N-terminal extension domain CHH28_RS15205 136b95f50ea2af7f50aa0f5e3778afa8 607 Pfam PF13229 Right handed beta helix region 154 340 4.2E-12 T 29-03-2018 CHH28_RS15205 136b95f50ea2af7f50aa0f5e3778afa8 607 SMART SM00710 258 279 980.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat CHH28_RS15205 136b95f50ea2af7f50aa0f5e3778afa8 607 SMART SM00710 288 320 810.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat CHH28_RS15205 136b95f50ea2af7f50aa0f5e3778afa8 607 SMART SM00710 125 159 3900.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat CHH28_RS15205 136b95f50ea2af7f50aa0f5e3778afa8 607 SMART SM00710 330 352 320.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat CHH28_RS15205 136b95f50ea2af7f50aa0f5e3778afa8 607 SMART SM00710 213 235 0.5 T 29-03-2018 IPR006626 Parallel beta-helix repeat CHH28_RS15205 136b95f50ea2af7f50aa0f5e3778afa8 607 SMART SM00710 396 421 6400.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat CHH28_RS15205 136b95f50ea2af7f50aa0f5e3778afa8 607 SMART SM00710 236 257 95.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat CHH28_RS15205 136b95f50ea2af7f50aa0f5e3778afa8 607 Gene3D G3DSA:2.160.20.10 134 387 6.6E-26 T 29-03-2018 IPR012334 Pectin lyase fold CHH28_RS17960 17dce2d3d748b7ab8d1600cd20fe13ef 372 Pfam PF12706 Beta-lactamase superfamily domain 116 308 1.2E-41 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS17960 17dce2d3d748b7ab8d1600cd20fe13ef 372 SUPERFAMILY SSF56281 91 325 3.64E-35 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS17960 17dce2d3d748b7ab8d1600cd20fe13ef 372 Gene3D G3DSA:3.60.15.10 74 358 3.5E-47 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS11620 8061d47b5c917c463aab0097d7b85d86 258 PIRSF PIRSF028069 6 258 1.1E-80 T 29-03-2018 IPR016866 Uncharacterised conserved protein UCP028069 CHH28_RS11620 8061d47b5c917c463aab0097d7b85d86 258 Gene3D G3DSA:3.90.20.10 20 189 5.7E-7 T 29-03-2018 CHH28_RS11620 8061d47b5c917c463aab0097d7b85d86 258 Pfam PF11932 Protein of unknown function (DUF3450) 14 251 2.5E-88 T 29-03-2018 IPR016866 Uncharacterised conserved protein UCP028069 CHH28_RS08385 1bd326ab4e67958326b08ac9acd243c7 503 SMART SM00091 22 89 0.27 T 29-03-2018 IPR000014 PAS domain CHH28_RS08385 1bd326ab4e67958326b08ac9acd243c7 503 SMART SM00091 202 271 5.7E-4 T 29-03-2018 IPR000014 PAS domain CHH28_RS08385 1bd326ab4e67958326b08ac9acd243c7 503 SUPERFAMILY SSF55785 211 323 1.92E-23 T 29-03-2018 IPR000014 PAS domain CHH28_RS08385 1bd326ab4e67958326b08ac9acd243c7 503 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 490 2.2E-48 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS08385 1bd326ab4e67958326b08ac9acd243c7 503 SMART SM00086 278 321 4.7E-6 T 29-03-2018 IPR001610 PAC motif CHH28_RS08385 1bd326ab4e67958326b08ac9acd243c7 503 SMART SM00086 93 133 60.0 T 29-03-2018 IPR001610 PAC motif CHH28_RS08385 1bd326ab4e67958326b08ac9acd243c7 503 Pfam PF13426 PAS domain 36 131 1.9E-4 T 29-03-2018 IPR000014 PAS domain CHH28_RS08385 1bd326ab4e67958326b08ac9acd243c7 503 SMART SM00267 321 494 6.3E-62 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS08385 1bd326ab4e67958326b08ac9acd243c7 503 Gene3D G3DSA:3.30.450.20 18 160 1.6E-13 T 29-03-2018 CHH28_RS08385 1bd326ab4e67958326b08ac9acd243c7 503 SUPERFAMILY SSF55785 28 131 1.93E-13 T 29-03-2018 IPR000014 PAS domain CHH28_RS08385 1bd326ab4e67958326b08ac9acd243c7 503 Pfam PF08447 PAS fold 226 314 5.6E-17 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CHH28_RS08385 1bd326ab4e67958326b08ac9acd243c7 503 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 328 492 8.8E-49 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS08385 1bd326ab4e67958326b08ac9acd243c7 503 SUPERFAMILY SSF55073 337 494 2.35E-48 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS08385 1bd326ab4e67958326b08ac9acd243c7 503 Gene3D G3DSA:3.30.70.270 327 495 3.3E-60 T 29-03-2018 CHH28_RS08385 1bd326ab4e67958326b08ac9acd243c7 503 Gene3D G3DSA:3.30.450.20 161 326 5.7E-29 T 29-03-2018 CHH28_RS08385 1bd326ab4e67958326b08ac9acd243c7 503 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 140 5.8E-11 T 29-03-2018 IPR000014 PAS domain CHH28_RS08385 1bd326ab4e67958326b08ac9acd243c7 503 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 200 328 2.5E-13 T 29-03-2018 IPR000014 PAS domain CHH28_RS05130 4f6787f33b1e62456f2b1a4a260a6db8 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 29-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CHH28_RS05130 4f6787f33b1e62456f2b1a4a260a6db8 112 Gene3D G3DSA:3.30.70.120 1 109 1.5E-48 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CHH28_RS05130 4f6787f33b1e62456f2b1a4a260a6db8 112 PIRSF PIRSF039144 1 112 2.9E-54 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CHH28_RS05130 4f6787f33b1e62456f2b1a4a260a6db8 112 SMART SM00938 4 105 7.3E-66 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CHH28_RS05130 4f6787f33b1e62456f2b1a4a260a6db8 112 PRINTS PR00340 P-II protein signature 83 103 1.0E-42 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CHH28_RS05130 4f6787f33b1e62456f2b1a4a260a6db8 112 PRINTS PR00340 P-II protein signature 52 75 1.0E-42 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CHH28_RS05130 4f6787f33b1e62456f2b1a4a260a6db8 112 PRINTS PR00340 P-II protein signature 2 17 1.0E-42 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CHH28_RS05130 4f6787f33b1e62456f2b1a4a260a6db8 112 PRINTS PR00340 P-II protein signature 23 41 1.0E-42 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CHH28_RS05130 4f6787f33b1e62456f2b1a4a260a6db8 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-42 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CHH28_RS05130 4f6787f33b1e62456f2b1a4a260a6db8 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 29-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CHH28_RS05130 4f6787f33b1e62456f2b1a4a260a6db8 112 SUPERFAMILY SSF54913 1 112 2.19E-45 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CHH28_RS01700 8446d9c931fd5a56743f012bb4510532 829 Gene3D G3DSA:1.10.3810.10 52 245 1.6E-75 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CHH28_RS01700 8446d9c931fd5a56743f012bb4510532 829 Pfam PF17092 Penicillin-binding protein OB-like domain 354 450 8.6E-15 T 29-03-2018 IPR031376 Penicillin-binding protein, OB-like domain CHH28_RS01700 8446d9c931fd5a56743f012bb4510532 829 Gene3D G3DSA:3.40.710.10 246 774 1.2E-122 T 29-03-2018 CHH28_RS01700 8446d9c931fd5a56743f012bb4510532 829 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 69 760 1.5E-180 T 29-03-2018 CHH28_RS01700 8446d9c931fd5a56743f012bb4510532 829 SUPERFAMILY SSF53955 47 259 4.78E-74 T 29-03-2018 IPR023346 Lysozyme-like domain CHH28_RS01700 8446d9c931fd5a56743f012bb4510532 829 Pfam PF00912 Transglycosylase 59 233 5.2E-63 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CHH28_RS01700 8446d9c931fd5a56743f012bb4510532 829 SUPERFAMILY SSF56601 215 237 1.64E-128 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS01700 8446d9c931fd5a56743f012bb4510532 829 SUPERFAMILY SSF56601 666 811 1.64E-128 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS01700 8446d9c931fd5a56743f012bb4510532 829 SUPERFAMILY SSF56601 266 317 1.64E-128 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS01700 8446d9c931fd5a56743f012bb4510532 829 SUPERFAMILY SSF56601 447 635 1.64E-128 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS01700 8446d9c931fd5a56743f012bb4510532 829 Pfam PF00905 Penicillin binding protein transpeptidase domain 452 735 3.3E-28 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CHH28_RS18340 415324f965d77aa1fd5bfd95da3ef53f 90 Gene3D G3DSA:1.10.150.310 46 90 1.6E-17 T 29-03-2018 CHH28_RS18340 415324f965d77aa1fd5bfd95da3ef53f 90 SUPERFAMILY SSF47781 17 89 3.11E-28 T 29-03-2018 IPR010994 RuvA domain 2-like CHH28_RS18340 415324f965d77aa1fd5bfd95da3ef53f 90 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 28 89 7.9E-26 T 29-03-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CHH28_RS18340 415324f965d77aa1fd5bfd95da3ef53f 90 SMART SM00278 67 86 220.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CHH28_RS18340 415324f965d77aa1fd5bfd95da3ef53f 90 SMART SM00278 37 56 0.1 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CHH28_RS18340 415324f965d77aa1fd5bfd95da3ef53f 90 Pfam PF12836 Helix-hairpin-helix motif 26 88 3.5E-24 T 29-03-2018 CHH28_RS18340 415324f965d77aa1fd5bfd95da3ef53f 90 Gene3D G3DSA:1.10.150.20 14 45 3.4E-9 T 29-03-2018 CHH28_RS06650 1db58223c4c83a8d5d9fcfb0cdc6bef1 437 Gene3D G3DSA:3.40.1080.10 198 437 1.0E-57 T 29-03-2018 CHH28_RS06650 1db58223c4c83a8d5d9fcfb0cdc6bef1 437 Gene3D G3DSA:3.40.1080.10 6 191 4.5E-34 T 29-03-2018 CHH28_RS06650 1db58223c4c83a8d5d9fcfb0cdc6bef1 437 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 279 431 6.9E-61 T 29-03-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CHH28_RS06650 1db58223c4c83a8d5d9fcfb0cdc6bef1 437 SUPERFAMILY SSF100950 4 230 6.98E-34 T 29-03-2018 CHH28_RS06650 1db58223c4c83a8d5d9fcfb0cdc6bef1 437 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 7 188 4.1E-12 T 29-03-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 CHH28_RS06650 1db58223c4c83a8d5d9fcfb0cdc6bef1 437 SUPERFAMILY SSF100950 197 432 2.37E-62 T 29-03-2018 CHH28_RS07965 cd20c2cda03f78990d77aef9eb9363de 334 Gene3D G3DSA:3.30.70.1290 4 195 2.2E-27 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CHH28_RS07965 cd20c2cda03f78990d77aef9eb9363de 334 SMART SM01321 13 187 7.3E-4 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CHH28_RS07965 cd20c2cda03f78990d77aef9eb9363de 334 SUPERFAMILY SSF143422 16 81 1.29E-18 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CHH28_RS07965 cd20c2cda03f78990d77aef9eb9363de 334 SUPERFAMILY SSF143422 134 193 1.29E-18 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CHH28_RS01820 8637e3c108baebb8cf213e1bfa16795a 235 Gene3D G3DSA:3.30.420.40 73 232 1.2E-34 T 29-03-2018 CHH28_RS01820 8637e3c108baebb8cf213e1bfa16795a 235 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 233 14.578 T 29-03-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CHH28_RS01820 8637e3c108baebb8cf213e1bfa16795a 235 Pfam PF03309 Type III pantothenate kinase 4 191 2.0E-30 T 29-03-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CHH28_RS01820 8637e3c108baebb8cf213e1bfa16795a 235 SUPERFAMILY SSF53067 105 227 9.93E-20 T 29-03-2018 CHH28_RS01820 8637e3c108baebb8cf213e1bfa16795a 235 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 50 228 8.1E-23 T 29-03-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CHH28_RS01820 8637e3c108baebb8cf213e1bfa16795a 235 SUPERFAMILY SSF53067 4 99 9.06E-16 T 29-03-2018 CHH28_RS05375 a2127fcb96d9321a6f03dfa679603da2 79 Gene3D G3DSA:3.10.20.30 1 79 6.4E-20 T 29-03-2018 IPR012675 Beta-grasp domain CHH28_RS05375 a2127fcb96d9321a6f03dfa679603da2 79 SUPERFAMILY SSF54285 1 79 3.36E-17 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CHH28_RS05375 a2127fcb96d9321a6f03dfa679603da2 79 Pfam PF02597 ThiS family 3 79 3.1E-15 T 29-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CHH28_RS09690 ba07dac647fed23a943b162715bc90c2 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 29-03-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CHH28_RS09690 ba07dac647fed23a943b162715bc90c2 428 SUPERFAMILY SSF56059 104 325 5.83E-67 T 29-03-2018 CHH28_RS09690 ba07dac647fed23a943b162715bc90c2 428 Gene3D G3DSA:3.40.50.20 2 95 3.7E-38 T 29-03-2018 CHH28_RS09690 ba07dac647fed23a943b162715bc90c2 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 2.7E-35 T 29-03-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CHH28_RS09690 ba07dac647fed23a943b162715bc90c2 428 Gene3D G3DSA:3.30.1490.20 134 189 2.6E-22 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CHH28_RS09690 ba07dac647fed23a943b162715bc90c2 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.2E-177 T 29-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CHH28_RS09690 ba07dac647fed23a943b162715bc90c2 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.102 T 29-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CHH28_RS09690 ba07dac647fed23a943b162715bc90c2 428 Gene3D G3DSA:3.90.600.10 330 424 3.5E-31 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CHH28_RS09690 ba07dac647fed23a943b162715bc90c2 428 SMART SM01209 103 296 1.2E-141 T 29-03-2018 CHH28_RS09690 ba07dac647fed23a943b162715bc90c2 428 SMART SM01210 330 423 2.3E-48 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CHH28_RS09690 ba07dac647fed23a943b162715bc90c2 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 3.6E-83 T 29-03-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CHH28_RS09690 ba07dac647fed23a943b162715bc90c2 428 SUPERFAMILY SSF52440 1 103 1.28E-37 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CHH28_RS09690 ba07dac647fed23a943b162715bc90c2 428 Gene3D G3DSA:3.30.470.20 191 329 1.2E-60 T 29-03-2018 CHH28_RS09690 ba07dac647fed23a943b162715bc90c2 428 SUPERFAMILY SSF51246 329 423 7.22E-30 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CHH28_RS09690 ba07dac647fed23a943b162715bc90c2 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 7.2E-28 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CHH28_RS17500 7691395f110582d2f5dad61b6500aa58 678 Pfam PF00271 Helicase conserved C-terminal domain 440 543 8.3E-20 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS17500 7691395f110582d2f5dad61b6500aa58 678 SMART SM00487 9 424 2.4E-23 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CHH28_RS17500 7691395f110582d2f5dad61b6500aa58 678 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 671 0.0 T 29-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CHH28_RS17500 7691395f110582d2f5dad61b6500aa58 678 SUPERFAMILY SSF52540 458 583 7.5E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS17500 7691395f110582d2f5dad61b6500aa58 678 SUPERFAMILY SSF52540 37 82 7.5E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS17500 7691395f110582d2f5dad61b6500aa58 678 Pfam PF04851 Type III restriction enzyme, res subunit 14 97 7.4E-9 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CHH28_RS17500 7691395f110582d2f5dad61b6500aa58 678 SUPERFAMILY SSF52540 3 414 5.19E-137 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS17500 7691395f110582d2f5dad61b6500aa58 678 Pfam PF02151 UvrB/uvrC motif 639 667 3.6E-8 T 29-03-2018 IPR001943 UVR domain GO:0005515 CHH28_RS17500 7691395f110582d2f5dad61b6500aa58 678 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 673 43.198 T 29-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CHH28_RS17500 7691395f110582d2f5dad61b6500aa58 678 Gene3D G3DSA:3.40.50.300 10 414 3.3E-29 T 29-03-2018 CHH28_RS17500 7691395f110582d2f5dad61b6500aa58 678 Gene3D G3DSA:4.10.860.10 611 678 4.5E-12 T 29-03-2018 IPR001943 UVR domain GO:0005515 CHH28_RS17500 7691395f110582d2f5dad61b6500aa58 678 SUPERFAMILY SSF46600 629 672 4.45E-9 T 29-03-2018 IPR001943 UVR domain GO:0005515 CHH28_RS17500 7691395f110582d2f5dad61b6500aa58 678 Gene3D G3DSA:3.40.50.300 415 588 2.7E-32 T 29-03-2018 CHH28_RS17500 7691395f110582d2f5dad61b6500aa58 678 Pfam PF12344 Ultra-violet resistance protein B 551 592 2.7E-22 T 29-03-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain CHH28_RS17500 7691395f110582d2f5dad61b6500aa58 678 SMART SM00490 459 545 6.0E-20 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS14305 2643a0e236b6b6cb0e8c2356f678fb30 821 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 1 164 5.7E-39 T 29-03-2018 IPR025199 DNA translocase FtsK, 4TM region CHH28_RS14305 2643a0e236b6b6cb0e8c2356f678fb30 821 Pfam PF09397 Ftsk gamma domain 755 815 3.8E-27 T 29-03-2018 IPR018541 FtsK gamma domain CHH28_RS14305 2643a0e236b6b6cb0e8c2356f678fb30 821 Pfam PF01580 FtsK/SpoIIIE family 440 653 3.2E-68 T 29-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CHH28_RS14305 2643a0e236b6b6cb0e8c2356f678fb30 821 SMART SM00843 753 818 3.1E-39 T 29-03-2018 IPR018541 FtsK gamma domain CHH28_RS14305 2643a0e236b6b6cb0e8c2356f678fb30 821 SUPERFAMILY SSF52540 414 726 3.87E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS14305 2643a0e236b6b6cb0e8c2356f678fb30 821 Gene3D G3DSA:1.10.10.10 755 809 2.6E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS14305 2643a0e236b6b6cb0e8c2356f678fb30 821 Gene3D G3DSA:3.40.50.300 286 692 1.0E-53 T 29-03-2018 CHH28_RS14305 2643a0e236b6b6cb0e8c2356f678fb30 821 SUPERFAMILY SSF46785 753 816 1.77E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS03290 26e32f1791cef72490d014b29a0b603c 398 Gene3D G3DSA:3.40.50.150 182 398 2.0E-33 T 29-03-2018 CHH28_RS03290 26e32f1791cef72490d014b29a0b603c 398 Gene3D G3DSA:2.30.130.10 1 73 1.2E-21 T 29-03-2018 IPR002478 PUA domain GO:0003723 CHH28_RS03290 26e32f1791cef72490d014b29a0b603c 398 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 169 339 9.2E-15 T 29-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CHH28_RS03290 26e32f1791cef72490d014b29a0b603c 398 SUPERFAMILY SSF53335 85 391 2.99E-64 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS03290 26e32f1791cef72490d014b29a0b603c 398 SUPERFAMILY SSF88697 4 74 1.44E-9 T 29-03-2018 IPR015947 PUA-like domain CHH28_RS03290 26e32f1791cef72490d014b29a0b603c 398 Gene3D G3DSA:3.30.750.80 77 180 5.7E-29 T 29-03-2018 CHH28_RS17200 76c3d8749cc1e2568a2a37deeb827fd8 191 Pfam PF03695 Uncharacterised protein family (UPF0149) 17 188 1.6E-19 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CHH28_RS17200 76c3d8749cc1e2568a2a37deeb827fd8 191 SUPERFAMILY SSF101327 20 189 7.45E-10 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CHH28_RS17200 76c3d8749cc1e2568a2a37deeb827fd8 191 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 15 186 3.5E-21 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CHH28_RS07775 5f689a09c6715bfcc9669090aa9da88a 312 Pfam PF01758 Sodium Bile acid symporter family 18 197 2.5E-30 T 29-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CHH28_RS17915 0166f8c0bd410291dc4b4af1d5d09a69 401 Pfam PF13000 Acetyl-coenzyme A transporter 1 6 153 4.3E-14 T 29-03-2018 IPR024371 Acetyl-coenzyme A transporter 1 GO:0008521|GO:0016021 Reactome: R-HSA-425397 CHH28_RS17915 0166f8c0bd410291dc4b4af1d5d09a69 401 SUPERFAMILY SSF103473 5 393 5.36E-38 T 29-03-2018 IPR020846 Major facilitator superfamily domain CHH28_RS17915 0166f8c0bd410291dc4b4af1d5d09a69 401 Gene3D G3DSA:1.20.1250.20 198 395 9.0E-20 T 29-03-2018 CHH28_RS17915 0166f8c0bd410291dc4b4af1d5d09a69 401 Gene3D G3DSA:1.20.1250.20 2 197 1.6E-16 T 29-03-2018 CHH28_RS17915 0166f8c0bd410291dc4b4af1d5d09a69 401 Pfam PF07690 Major Facilitator Superfamily 237 389 1.0E-9 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CHH28_RS04970 5c33cea70d1a959654b08db08595aad9 604 Pfam PF13522 Glutamine amidotransferase domain 65 187 8.7E-23 T 29-03-2018 CHH28_RS04970 5c33cea70d1a959654b08db08595aad9 604 Pfam PF01380 SIS domain 457 586 5.8E-24 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CHH28_RS04970 5c33cea70d1a959654b08db08595aad9 604 Pfam PF01380 SIS domain 285 413 2.4E-32 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CHH28_RS04970 5c33cea70d1a959654b08db08595aad9 604 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 604 40.6 T 29-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CHH28_RS04970 5c33cea70d1a959654b08db08595aad9 604 Gene3D G3DSA:3.60.20.10 2 240 9.5E-71 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS04970 5c33cea70d1a959654b08db08595aad9 604 Gene3D G3DSA:3.40.50.10490 241 453 4.4E-63 T 29-03-2018 CHH28_RS04970 5c33cea70d1a959654b08db08595aad9 604 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 604 6.6E-259 T 29-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CHH28_RS04970 5c33cea70d1a959654b08db08595aad9 604 SUPERFAMILY SSF53697 245 604 7.05E-111 T 29-03-2018 CHH28_RS04970 5c33cea70d1a959654b08db08595aad9 604 SUPERFAMILY SSF56235 2 233 7.89E-74 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS04970 5c33cea70d1a959654b08db08595aad9 604 Gene3D G3DSA:3.40.50.10490 454 602 7.0E-51 T 29-03-2018 CHH28_RS14830 2aadb230d372e55be1d3cfd0d2249608 967 Gene3D G3DSA:3.30.830.10 487 726 2.4E-11 T 29-03-2018 CHH28_RS14830 2aadb230d372e55be1d3cfd0d2249608 967 Gene3D G3DSA:3.30.830.10 727 959 1.4E-25 T 29-03-2018 CHH28_RS14830 2aadb230d372e55be1d3cfd0d2249608 967 Gene3D G3DSA:3.30.830.10 1 251 1.5E-46 T 29-03-2018 CHH28_RS14830 2aadb230d372e55be1d3cfd0d2249608 967 SUPERFAMILY SSF63411 6 241 5.06E-48 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CHH28_RS14830 2aadb230d372e55be1d3cfd0d2249608 967 SUPERFAMILY SSF63411 781 950 2.44E-34 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CHH28_RS14830 2aadb230d372e55be1d3cfd0d2249608 967 SUPERFAMILY SSF63411 518 747 1.43E-45 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CHH28_RS14830 2aadb230d372e55be1d3cfd0d2249608 967 Pfam PF05193 Peptidase M16 inactive domain 203 388 3.2E-14 T 29-03-2018 IPR007863 Peptidase M16, C-terminal CHH28_RS14830 2aadb230d372e55be1d3cfd0d2249608 967 Pfam PF05193 Peptidase M16 inactive domain 787 882 3.7E-5 T 29-03-2018 IPR007863 Peptidase M16, C-terminal CHH28_RS14830 2aadb230d372e55be1d3cfd0d2249608 967 Gene3D G3DSA:3.30.830.10 263 482 1.6E-14 T 29-03-2018 CHH28_RS14830 2aadb230d372e55be1d3cfd0d2249608 967 Pfam PF08367 Peptidase M16C associated 462 707 3.1E-56 T 29-03-2018 IPR013578 Peptidase M16C associated GO:0006508 CHH28_RS14830 2aadb230d372e55be1d3cfd0d2249608 967 SMART SM01264 462 709 2.8E-71 T 29-03-2018 IPR013578 Peptidase M16C associated GO:0006508 CHH28_RS14830 2aadb230d372e55be1d3cfd0d2249608 967 Pfam PF00675 Insulinase (Peptidase family M16) 54 138 2.2E-8 T 29-03-2018 IPR011765 Peptidase M16, N-terminal CHH28_RS14830 2aadb230d372e55be1d3cfd0d2249608 967 SUPERFAMILY SSF63411 275 519 1.93E-51 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 Gene3D G3DSA:3.90.580.10 1 103 4.0E-36 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 Gene3D G3DSA:3.40.1360.20 256 370 8.6E-30 T 29-03-2018 CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 Gene3D G3DSA:3.90.980.10 108 241 3.1E-46 T 29-03-2018 IPR013264 DNA primase, catalytic core, N-terminal CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 PIRSF PIRSF002811 2 607 7.9E-153 T 29-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 Pfam PF08278 DNA primase DnaG DnaB-binding 470 591 3.6E-12 T 29-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 Pfam PF08275 DNA primase catalytic core, N-terminal domain 125 252 2.3E-43 T 29-03-2018 IPR013264 DNA primase, catalytic core, N-terminal CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 Pfam PF01807 CHC2 zinc finger 6 101 1.5E-39 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 SMART SM00766 468 592 2.4E-4 T 29-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 Gene3D G3DSA:1.20.50.20 371 418 2.8E-17 T 29-03-2018 CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 SUPERFAMILY SSF117023 470 595 6.54E-11 T 29-03-2018 CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 TIGRFAM TIGR01391 dnaG: DNA primase 4 418 2.0E-149 T 29-03-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 SMART SM00400 36 90 8.8E-33 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 Pfam PF13662 Toprim domain 263 326 1.9E-15 T 29-03-2018 IPR006171 TOPRIM domain CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 SMART SM00493 260 331 4.0E-16 T 29-03-2018 IPR006171 TOPRIM domain CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 Gene3D G3DSA:1.10.860.10 452 598 6.5E-15 T 29-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 Pfam PF10410 DnaB-helicase binding domain of primase 371 422 2.8E-12 T 29-03-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 SUPERFAMILY SSF57783 4 101 6.97E-37 T 29-03-2018 CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 SUPERFAMILY SSF56731 115 424 6.67E-107 T 29-03-2018 CHH28_RS01425 784b4d7744bb3d4e33381c3429f161c1 608 Hamap MF_00974 DNA primase [dnaG]. 4 593 29.122 T 29-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CHH28_RS17015 ef1f29ecbba370d762c3582d95035254 358 Gene3D G3DSA:3.30.470.20 164 353 1.7E-33 T 29-03-2018 CHH28_RS17015 ef1f29ecbba370d762c3582d95035254 358 Gene3D G3DSA:3.40.50.20 1 73 8.1E-10 T 29-03-2018 CHH28_RS17015 ef1f29ecbba370d762c3582d95035254 358 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 338 2.3E-98 T 29-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CHH28_RS17015 ef1f29ecbba370d762c3582d95035254 358 Gene3D G3DSA:3.30.1490.20 100 163 1.7E-19 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CHH28_RS17015 ef1f29ecbba370d762c3582d95035254 358 SUPERFAMILY SSF51246 289 355 1.65E-15 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CHH28_RS17015 ef1f29ecbba370d762c3582d95035254 358 SUPERFAMILY SSF52440 1 84 2.01E-10 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CHH28_RS17015 ef1f29ecbba370d762c3582d95035254 358 Pfam PF02222 ATP-grasp domain 94 263 1.2E-55 T 29-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CHH28_RS17015 ef1f29ecbba370d762c3582d95035254 358 SUPERFAMILY SSF56059 85 283 2.83E-60 T 29-03-2018 CHH28_RS17015 ef1f29ecbba370d762c3582d95035254 358 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 336 36.951 T 29-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CHH28_RS04960 e8779bba5f9b615e48920753ece71a0f 558 SMART SM00267 385 556 8.6E-57 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS04960 e8779bba5f9b615e48920753ece71a0f 558 Gene3D G3DSA:3.30.70.270 389 558 1.1E-56 T 29-03-2018 CHH28_RS04960 e8779bba5f9b615e48920753ece71a0f 558 SUPERFAMILY SSF55073 401 555 8.63E-48 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS04960 e8779bba5f9b615e48920753ece71a0f 558 Pfam PF00990 Diguanylate cyclase, GGDEF domain 396 552 6.5E-45 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS04960 e8779bba5f9b615e48920753ece71a0f 558 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 394 555 5.5E-47 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS11690 398efd901edba567ca58f14f179bcc0f 275 Pfam PF08668 HDOD domain 13 205 6.1E-55 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD CHH28_RS11690 398efd901edba567ca58f14f179bcc0f 275 Gene3D G3DSA:1.10.3210.10 1 250 3.4E-40 T 29-03-2018 CHH28_RS11690 398efd901edba567ca58f14f179bcc0f 275 SUPERFAMILY SSF109604 3 266 1.57E-64 T 29-03-2018 CHH28_RS11675 d388bed0877e4576872974df53205d8d 251 SUPERFAMILY SSF50630 104 236 1.38E-37 T 29-03-2018 IPR021109 Aspartic peptidase domain CHH28_RS11675 d388bed0877e4576872974df53205d8d 251 Gene3D G3DSA:2.40.70.10 100 229 2.7E-41 T 29-03-2018 IPR021109 Aspartic peptidase domain CHH28_RS11675 d388bed0877e4576872974df53205d8d 251 Pfam PF05618 Putative ATP-dependant zinc protease 104 238 1.6E-37 T 29-03-2018 CHH28_RS11505 0cfcedf413ebbfa286474de5ec74964b 254 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 174 253 3.6E-26 T 29-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CHH28_RS11505 0cfcedf413ebbfa286474de5ec74964b 254 Gene3D G3DSA:2.160.10.10 1 190 3.5E-46 T 29-03-2018 CHH28_RS11505 0cfcedf413ebbfa286474de5ec74964b 254 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 46 2.0E-8 T 29-03-2018 IPR001451 Hexapeptide repeat CHH28_RS11505 0cfcedf413ebbfa286474de5ec74964b 254 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 102 131 1.8E-4 T 29-03-2018 IPR001451 Hexapeptide repeat CHH28_RS11505 0cfcedf413ebbfa286474de5ec74964b 254 Gene3D G3DSA:1.20.1180.10 192 254 1.2E-21 T 29-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CHH28_RS11505 0cfcedf413ebbfa286474de5ec74964b 254 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 2 30 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CHH28_RS11505 0cfcedf413ebbfa286474de5ec74964b 254 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 252 7.2E-95 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CHH28_RS11505 0cfcedf413ebbfa286474de5ec74964b 254 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 254 41.413 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CHH28_RS11505 0cfcedf413ebbfa286474de5ec74964b 254 SUPERFAMILY SSF51161 1 236 1.32E-76 T 29-03-2018 IPR011004 Trimeric LpxA-like CHH28_RS11505 0cfcedf413ebbfa286474de5ec74964b 254 PIRSF PIRSF000456 1 254 1.0E-98 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CHH28_RS08925 0385817603b9831887b76905e10e711c 152 SUPERFAMILY SSF55729 40 134 1.6E-18 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS08925 0385817603b9831887b76905e10e711c 152 Pfam PF13673 Acetyltransferase (GNAT) domain 29 135 2.8E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS08925 0385817603b9831887b76905e10e711c 152 Gene3D G3DSA:3.40.630.30 10 144 1.4E-17 T 29-03-2018 CHH28_RS14175 67f2985415e4f1ee4bc79de8ce8f537e 336 Gene3D G3DSA:3.60.15.10 11 334 3.7E-13 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS14175 67f2985415e4f1ee4bc79de8ce8f537e 336 SUPERFAMILY SSF56281 83 228 7.99E-10 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS14175 67f2985415e4f1ee4bc79de8ce8f537e 336 Pfam PF12706 Beta-lactamase superfamily domain 91 215 7.9E-7 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS08770 2f9d5d6222ca4e3f02c1e22ecbd0f712 254 Pfam PF01476 LysM domain 42 83 4.7E-14 T 29-03-2018 IPR018392 LysM domain CHH28_RS08770 2f9d5d6222ca4e3f02c1e22ecbd0f712 254 SMART SM00257 41 85 4.9E-14 T 29-03-2018 IPR018392 LysM domain CHH28_RS08770 2f9d5d6222ca4e3f02c1e22ecbd0f712 254 Pfam PF01551 Peptidase family M23 154 247 6.1E-31 T 29-03-2018 IPR016047 Peptidase M23 CHH28_RS08770 2f9d5d6222ca4e3f02c1e22ecbd0f712 254 Gene3D G3DSA:3.10.350.10 34 123 6.4E-16 T 29-03-2018 CHH28_RS08770 2f9d5d6222ca4e3f02c1e22ecbd0f712 254 SUPERFAMILY SSF51261 41 251 4.24E-52 T 29-03-2018 IPR011055 Duplicated hybrid motif CHH28_RS08770 2f9d5d6222ca4e3f02c1e22ecbd0f712 254 Gene3D G3DSA:2.70.70.10 124 254 4.9E-36 T 29-03-2018 CHH28_RS05490 6c885ce963c8b359806e3d17eb15de05 304 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 218 281 2.5E-12 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CHH28_RS05490 6c885ce963c8b359806e3d17eb15de05 304 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 219 286 1.7E-10 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CHH28_RS05490 6c885ce963c8b359806e3d17eb15de05 304 SUPERFAMILY SSF74653 191 297 2.22E-18 T 29-03-2018 CHH28_RS05490 6c885ce963c8b359806e3d17eb15de05 304 Gene3D G3DSA:3.30.1150.10 105 301 1.6E-18 T 29-03-2018 CHH28_RS02345 ae05c7ee67471d136834bbb983869935 171 Pfam PF01047 MarR family 31 89 1.9E-17 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS02345 ae05c7ee67471d136834bbb983869935 171 SUPERFAMILY SSF46785 2 139 2.01E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS02345 ae05c7ee67471d136834bbb983869935 171 SMART SM00418 29 106 0.006 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CHH28_RS02345 ae05c7ee67471d136834bbb983869935 171 Gene3D G3DSA:1.10.10.10 1 145 4.0E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS02345 ae05c7ee67471d136834bbb983869935 171 SMART SM00347 24 121 9.1E-22 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS02345 ae05c7ee67471d136834bbb983869935 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 8.0E-7 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS02345 ae05c7ee67471d136834bbb983869935 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 8.0E-7 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS02345 ae05c7ee67471d136834bbb983869935 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 8.0E-7 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS03090 fa21ee00d91299fafc8b39f464935f79 266 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 262 19.554 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CHH28_RS03090 fa21ee00d91299fafc8b39f464935f79 266 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 257 1.5E-76 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CHH28_RS03090 fa21ee00d91299fafc8b39f464935f79 266 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 138 150 - T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CHH28_RS03090 fa21ee00d91299fafc8b39f464935f79 266 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 263 1.8E-82 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CHH28_RS03730 696d0047de8ce9f14a1bb9f23ade6dcc 566 Pfam PF17392 Urocanase C-terminal domain 353 547 3.6E-91 T 29-03-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CHH28_RS03730 696d0047de8ce9f14a1bb9f23ade6dcc 566 PIRSF PIRSF001423 1 561 1.9E-297 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CHH28_RS03730 696d0047de8ce9f14a1bb9f23ade6dcc 566 Pfam PF01175 Urocanase Rossmann-like domain 142 350 4.8E-88 T 29-03-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CHH28_RS03730 696d0047de8ce9f14a1bb9f23ade6dcc 566 Pfam PF17391 Urocanase N-terminal domain 13 139 5.3E-62 T 29-03-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CHH28_RS03730 696d0047de8ce9f14a1bb9f23ade6dcc 566 TIGRFAM TIGR01228 hutU: urocanate hydratase 12 555 3.9E-300 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CHH28_RS03730 696d0047de8ce9f14a1bb9f23ade6dcc 566 SUPERFAMILY SSF111326 7 556 1.07E-262 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CHH28_RS03730 696d0047de8ce9f14a1bb9f23ade6dcc 566 ProSitePatterns PS01233 Urocanase signature. 443 458 - T 29-03-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CHH28_RS03730 696d0047de8ce9f14a1bb9f23ade6dcc 566 Hamap MF_00577 Urocanate hydratase [hutU]. 6 557 50.218 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CHH28_RS03730 696d0047de8ce9f14a1bb9f23ade6dcc 566 Gene3D G3DSA:3.40.1770.10 197 556 3.7E-166 T 29-03-2018 CHH28_RS03730 696d0047de8ce9f14a1bb9f23ade6dcc 566 Gene3D G3DSA:3.40.1770.10 11 154 1.6E-28 T 29-03-2018 CHH28_RS11325 537d851836ea50a6a41f9d9cec2179be 614 SMART SM01358 42 263 2.5E-11 T 29-03-2018 IPR032255 Helical bimodular sensor domain CHH28_RS11325 537d851836ea50a6a41f9d9cec2179be 614 Gene3D G3DSA:1.10.287.1060 286 366 0.59 T 29-03-2018 CHH28_RS11325 537d851836ea50a6a41f9d9cec2179be 614 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 411 577 1.6E-36 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS11325 537d851836ea50a6a41f9d9cec2179be 614 Gene3D G3DSA:1.20.120.20 573 612 0.064 T 29-03-2018 CHH28_RS11325 537d851836ea50a6a41f9d9cec2179be 614 Gene3D G3DSA:1.20.120.330 39 265 0.011 T 29-03-2018 CHH28_RS11325 537d851836ea50a6a41f9d9cec2179be 614 Gene3D G3DSA:1.10.287.950 367 572 6.5E-44 T 29-03-2018 CHH28_RS11325 537d851836ea50a6a41f9d9cec2179be 614 SUPERFAMILY SSF58104 312 614 4.05E-54 T 29-03-2018 CHH28_RS11325 537d851836ea50a6a41f9d9cec2179be 614 SMART SM00283 352 613 3.5E-45 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS15500 c986380748f6fb4c98fd3e3b26949666 697 Pfam PF13307 Helicase C-terminal domain 539 693 6.1E-30 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CHH28_RS15500 c986380748f6fb4c98fd3e3b26949666 697 Gene3D G3DSA:3.40.50.300 513 691 4.4E-8 T 29-03-2018 CHH28_RS15500 c986380748f6fb4c98fd3e3b26949666 697 Gene3D G3DSA:3.40.50.300 22 485 1.2E-21 T 29-03-2018 CHH28_RS15500 c986380748f6fb4c98fd3e3b26949666 697 SMART SM00491 555 680 5.5E-26 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CHH28_RS15500 c986380748f6fb4c98fd3e3b26949666 697 SUPERFAMILY SSF52540 13 129 6.41E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS15500 c986380748f6fb4c98fd3e3b26949666 697 SUPERFAMILY SSF52540 218 274 6.41E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS15500 c986380748f6fb4c98fd3e3b26949666 697 SUPERFAMILY SSF52540 639 674 6.41E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS15500 c986380748f6fb4c98fd3e3b26949666 697 Pfam PF00270 DEAD/DEAH box helicase 55 114 1.2E-5 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CHH28_RS15500 c986380748f6fb4c98fd3e3b26949666 697 SMART SM00487 21 317 0.0055 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CHH28_RS10790 bd93b48cea87270e1dee03ddf7c9d44c 185 Gene3D G3DSA:3.10.180.10 18 175 8.1E-32 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS10790 bd93b48cea87270e1dee03ddf7c9d44c 185 ProSitePatterns PS00934 Glyoxalase I signature 1. 26 47 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CHH28_RS10790 bd93b48cea87270e1dee03ddf7c9d44c 185 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 14 177 1.0E-49 T 29-03-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CHH28_RS10790 bd93b48cea87270e1dee03ddf7c9d44c 185 SUPERFAMILY SSF54593 22 173 1.31E-32 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS10790 bd93b48cea87270e1dee03ddf7c9d44c 185 ProSitePatterns PS00935 Glyoxalase I signature 2. 113 129 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CHH28_RS10790 bd93b48cea87270e1dee03ddf7c9d44c 185 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 25 169 7.6E-20 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CHH28_RS14495 64fc8809adee5daf230d581b169dcf1a 194 Gene3D G3DSA:3.55.40.10 35 194 4.9E-22 T 29-03-2018 CHH28_RS14495 64fc8809adee5daf230d581b169dcf1a 194 PRINTS PR00885 Bacterial general secretion pathway protein H signature 4 18 2.6E-9 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CHH28_RS14495 64fc8809adee5daf230d581b169dcf1a 194 PRINTS PR00885 Bacterial general secretion pathway protein H signature 19 33 2.6E-9 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CHH28_RS14495 64fc8809adee5daf230d581b169dcf1a 194 PRINTS PR00885 Bacterial general secretion pathway protein H signature 148 163 2.6E-9 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CHH28_RS14495 64fc8809adee5daf230d581b169dcf1a 194 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 1.2E-4 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS14495 64fc8809adee5daf230d581b169dcf1a 194 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 29 2.7E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS14495 64fc8809adee5daf230d581b169dcf1a 194 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS14495 64fc8809adee5daf230d581b169dcf1a 194 SUPERFAMILY SSF54523 10 82 4.79E-7 T 29-03-2018 CHH28_RS18425 74e3ed24e52f16c0d36d007f12d20f1a 601 Gene3D G3DSA:3.40.50.300 223 374 5.9E-45 T 29-03-2018 CHH28_RS18425 74e3ed24e52f16c0d36d007f12d20f1a 601 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CHH28_RS18425 74e3ed24e52f16c0d36d007f12d20f1a 601 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 562 44.125 T 29-03-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 CHH28_RS18425 74e3ed24e52f16c0d36d007f12d20f1a 601 SMART SM00487 25 223 1.5E-61 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CHH28_RS18425 74e3ed24e52f16c0d36d007f12d20f1a 601 Gene3D G3DSA:3.40.50.300 16 222 3.4E-57 T 29-03-2018 CHH28_RS18425 74e3ed24e52f16c0d36d007f12d20f1a 601 Pfam PF00270 DEAD/DEAH box helicase 31 196 2.1E-50 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CHH28_RS18425 74e3ed24e52f16c0d36d007f12d20f1a 601 Pfam PF03880 DbpA RNA binding domain 490 557 8.4E-19 T 29-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CHH28_RS18425 74e3ed24e52f16c0d36d007f12d20f1a 601 Pfam PF00271 Helicase conserved C-terminal domain 233 340 4.6E-29 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS18425 74e3ed24e52f16c0d36d007f12d20f1a 601 SUPERFAMILY SSF52540 74 361 1.84E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS18425 74e3ed24e52f16c0d36d007f12d20f1a 601 SMART SM00490 259 340 3.4E-33 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS10215 7dda297cdb9c7d343b1d52417c12883d 530 Gene3D G3DSA:3.40.50.720 379 523 7.1E-11 T 29-03-2018 CHH28_RS10215 7dda297cdb9c7d343b1d52417c12883d 530 Pfam PF00999 Sodium/hydrogen exchanger family 3 349 1.6E-33 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CHH28_RS10215 7dda297cdb9c7d343b1d52417c12883d 530 Pfam PF02254 TrkA-N domain 385 505 3.2E-14 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CHH28_RS10215 7dda297cdb9c7d343b1d52417c12883d 530 SUPERFAMILY SSF51735 385 515 4.14E-13 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS03075 569eea2bad630b142b7e884de38236ce 704 SUPERFAMILY SSF81301 181 391 1.96E-60 T 29-03-2018 CHH28_RS03075 569eea2bad630b142b7e884de38236ce 704 Gene3D G3DSA:3.10.20.30 381 456 1.2E-24 T 29-03-2018 IPR012675 Beta-grasp domain CHH28_RS03075 569eea2bad630b142b7e884de38236ce 704 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 700 7.9E-241 T 29-03-2018 IPR004811 RelA/SpoT family GO:0015969 CHH28_RS03075 569eea2bad630b142b7e884de38236ce 704 Pfam PF04607 Region found in RelA / SpoT proteins 235 344 9.0E-34 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 CHH28_RS03075 569eea2bad630b142b7e884de38236ce 704 SUPERFAMILY SSF55021 627 702 8.14E-5 T 29-03-2018 CHH28_RS03075 569eea2bad630b142b7e884de38236ce 704 Pfam PF13328 HD domain 26 175 4.0E-51 T 29-03-2018 IPR003607 HD/PDEase domain CHH28_RS03075 569eea2bad630b142b7e884de38236ce 704 Gene3D G3DSA:3.30.70.260 625 703 4.2E-9 T 29-03-2018 CHH28_RS03075 569eea2bad630b142b7e884de38236ce 704 Gene3D G3DSA:3.30.460.10 194 325 4.8E-39 T 29-03-2018 CHH28_RS03075 569eea2bad630b142b7e884de38236ce 704 SMART SM00954 235 345 4.2E-62 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 CHH28_RS03075 569eea2bad630b142b7e884de38236ce 704 SUPERFAMILY SSF81271 374 446 3.05E-22 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CHH28_RS03075 569eea2bad630b142b7e884de38236ce 704 SMART SM00471 41 153 2.1E-9 T 29-03-2018 IPR003607 HD/PDEase domain CHH28_RS03075 569eea2bad630b142b7e884de38236ce 704 Pfam PF02824 TGS domain 387 446 6.2E-20 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CHH28_RS03075 569eea2bad630b142b7e884de38236ce 704 Pfam PF13291 ACT domain 624 701 7.2E-12 T 29-03-2018 IPR002912 ACT domain CHH28_RS03075 569eea2bad630b142b7e884de38236ce 704 SUPERFAMILY SSF109604 3 189 8.79E-71 T 29-03-2018 CHH28_RS10485 20f8c91b4b8de91b96389378169fc9f5 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 284 3.8E-17 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CHH28_RS10485 20f8c91b4b8de91b96389378169fc9f5 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 364 1.2E-73 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CHH28_RS10485 20f8c91b4b8de91b96389378169fc9f5 396 Gene3D G3DSA:2.40.50.100 162 330 5.7E-5 T 29-03-2018 CHH28_RS10485 20f8c91b4b8de91b96389378169fc9f5 396 Gene3D G3DSA:2.40.50.100 62 134 1.9E-17 T 29-03-2018 CHH28_RS10485 20f8c91b4b8de91b96389378169fc9f5 396 SUPERFAMILY SSF111369 53 288 1.16E-54 T 29-03-2018 CHH28_RS16575 0603c4d4c04601cf8a89151e4c6e41bb 405 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CHH28_RS16575 0603c4d4c04601cf8a89151e4c6e41bb 405 PIRSF PIRSF005572 22 401 4.8E-50 T 29-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CHH28_RS16575 0603c4d4c04601cf8a89151e4c6e41bb 405 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 403 6.0E-174 T 29-03-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CHH28_RS16575 0603c4d4c04601cf8a89151e4c6e41bb 405 Pfam PF00266 Aminotransferase class-V 25 393 2.0E-148 T 29-03-2018 IPR000192 Aminotransferase class V domain CHH28_RS16575 0603c4d4c04601cf8a89151e4c6e41bb 405 Gene3D G3DSA:3.90.1150.10 282 400 9.8E-38 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS16575 0603c4d4c04601cf8a89151e4c6e41bb 405 SUPERFAMILY SSF53383 6 400 6.72E-127 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS16575 0603c4d4c04601cf8a89151e4c6e41bb 405 Gene3D G3DSA:3.40.640.10 34 281 2.0E-58 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS12345 f52b091d98bd2b88485025a7bf1aa3e7 290 PIRSF PIRSF006268 1 289 7.4E-67 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CHH28_RS12345 f52b091d98bd2b88485025a7bf1aa3e7 290 Pfam PF02424 ApbE family 13 274 1.1E-68 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CHH28_RS12345 f52b091d98bd2b88485025a7bf1aa3e7 290 SUPERFAMILY SSF143631 2 280 1.67E-82 T 29-03-2018 IPR003374 ApbE-like domain CHH28_RS12345 f52b091d98bd2b88485025a7bf1aa3e7 290 Gene3D G3DSA:3.10.520.10 1 287 2.8E-50 T 29-03-2018 CHH28_RS12665 07465d14af5eae409c02b559930fb0f8 234 Gene3D G3DSA:1.10.287.460 24 112 8.3E-23 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CHH28_RS12665 07465d14af5eae409c02b559930fb0f8 234 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 141 228 1.6E-27 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CHH28_RS12665 07465d14af5eae409c02b559930fb0f8 234 SUPERFAMILY SSF54534 34 231 7.46E-55 T 29-03-2018 CHH28_RS12665 07465d14af5eae409c02b559930fb0f8 234 Gene3D G3DSA:3.10.50.40 113 232 2.0E-42 T 29-03-2018 CHH28_RS12665 07465d14af5eae409c02b559930fb0f8 234 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 21 131 3.0E-26 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CHH28_RS04250 de8de58549eae7d18b093b4f55387520 131 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS04250 de8de58549eae7d18b093b4f55387520 131 Gene3D G3DSA:1.10.1660.10 1 54 7.2E-16 T 29-03-2018 CHH28_RS04250 de8de58549eae7d18b093b4f55387520 131 Pfam PF13411 MerR HTH family regulatory protein 1 68 1.4E-13 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS04250 de8de58549eae7d18b093b4f55387520 131 Gene3D G3DSA:1.10.1660.10 55 130 7.7E-11 T 29-03-2018 CHH28_RS04250 de8de58549eae7d18b093b4f55387520 131 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.4E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS04250 de8de58549eae7d18b093b4f55387520 131 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.4E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS04250 de8de58549eae7d18b093b4f55387520 131 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 1.4E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS04250 de8de58549eae7d18b093b4f55387520 131 SMART SM00422 1 69 3.0E-16 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS04250 de8de58549eae7d18b093b4f55387520 131 SUPERFAMILY SSF46955 1 120 1.65E-24 T 29-03-2018 IPR009061 Putative DNA-binding domain CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 Gene3D G3DSA:1.10.287.380 910 980 1.5E-24 T 29-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 SUPERFAMILY SSF50677 193 366 5.23E-59 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 964 0.0 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 Pfam PF08264 Anticodon-binding domain of tRNA 701 856 3.3E-47 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 982 15.939 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 Gene3D G3DSA:1.10.730.10 637 849 4.2E-58 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 637 3.5E-216 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 SUPERFAMILY SSF52374 365 577 8.7E-133 T 29-03-2018 CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 SUPERFAMILY SSF52374 1 193 8.7E-133 T 29-03-2018 CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 SUPERFAMILY SSF52374 615 647 8.7E-133 T 29-03-2018 CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 917 982 1.1E-19 T 29-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 Gene3D G3DSA:3.40.50.620 2 636 1.4E-133 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 SUPERFAMILY SSF46589 917 981 2.3E-16 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 PRINTS PR00986 Valyl-tRNA synthetase signature 370 383 5.9E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 5.9E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 PRINTS PR00986 Valyl-tRNA synthetase signature 506 524 5.9E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 PRINTS PR00986 Valyl-tRNA synthetase signature 237 254 5.9E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 PRINTS PR00986 Valyl-tRNA synthetase signature 470 491 5.9E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CHH28_RS16195 b972df4f14e65a158f9a92c87a69f0b5 984 SUPERFAMILY SSF47323 648 932 6.73E-71 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS11095 4493fcf1b13bb86127e806da9ce5785e 84 Gene3D G3DSA:1.10.150.250 2 84 2.6E-23 T 29-03-2018 CHH28_RS11095 4493fcf1b13bb86127e806da9ce5785e 84 Pfam PF03937 Flavinator of succinate dehydrogenase 8 75 3.2E-23 T 29-03-2018 IPR005631 Flavinator of succinate dehydrogenase CHH28_RS11095 4493fcf1b13bb86127e806da9ce5785e 84 SUPERFAMILY SSF109910 4 79 1.03E-21 T 29-03-2018 IPR005631 Flavinator of succinate dehydrogenase CHH28_RS10020 dfe08d5a50cb79c26e711fff3737bc08 423 SUPERFAMILY SSF50985 58 345 7.85E-43 T 29-03-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II CHH28_RS10020 dfe08d5a50cb79c26e711fff3737bc08 423 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 315 344 1.2E-5 T 29-03-2018 CHH28_RS10020 dfe08d5a50cb79c26e711fff3737bc08 423 Gene3D G3DSA:2.130.10.30 16 209 3.3E-18 T 29-03-2018 CHH28_RS10020 dfe08d5a50cb79c26e711fff3737bc08 423 Gene3D G3DSA:2.130.10.30 210 415 1.8E-30 T 29-03-2018 CHH28_RS09955 d50884e89a20c1d1d192ba3fa5555d30 131 SUPERFAMILY SSF54637 1 128 1.51E-36 T 29-03-2018 IPR029069 HotDog domain CHH28_RS09955 d50884e89a20c1d1d192ba3fa5555d30 131 Pfam PF13279 Thioesterase-like superfamily 10 123 5.2E-9 T 29-03-2018 CHH28_RS09955 d50884e89a20c1d1d192ba3fa5555d30 131 Gene3D G3DSA:3.10.129.10 1 130 6.6E-30 T 29-03-2018 CHH28_RS19505 0301a778218934f47b86b55e58339d93 147 Gene3D G3DSA:3.10.450.50 131 147 0.39 T 29-03-2018 CHH28_RS19505 0301a778218934f47b86b55e58339d93 147 Gene3D G3DSA:3.10.450.50 2 122 2.3E-41 T 29-03-2018 CHH28_RS19505 0301a778218934f47b86b55e58339d93 147 SUPERFAMILY SSF54427 23 119 1.44E-30 T 29-03-2018 IPR032710 NTF2-like domain CHH28_RS19505 0301a778218934f47b86b55e58339d93 147 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 119 25.448 T 29-03-2018 IPR023006 Uncharacterised protein family UPF0225 CHH28_RS19505 0301a778218934f47b86b55e58339d93 147 Pfam PF02810 SEC-C motif 129 146 7.3E-9 T 29-03-2018 IPR004027 SEC-C motif CHH28_RS19505 0301a778218934f47b86b55e58339d93 147 Pfam PF02810 SEC-C motif 4 18 4.3E-5 T 29-03-2018 IPR004027 SEC-C motif CHH28_RS19505 0301a778218934f47b86b55e58339d93 147 SUPERFAMILY SSF103642 127 146 1.23E-6 T 29-03-2018 CHH28_RS10560 1fe2b90b5e0e024fd41779c28f39b6c8 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 6.2E-33 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CHH28_RS10560 1fe2b90b5e0e024fd41779c28f39b6c8 97 SMART SM00883 2 95 5.8E-55 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CHH28_RS10560 1fe2b90b5e0e024fd41779c28f39b6c8 97 Gene3D G3DSA:2.30.33.40 1 96 1.7E-36 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CHH28_RS10560 1fe2b90b5e0e024fd41779c28f39b6c8 97 SUPERFAMILY SSF50129 1 96 6.36E-34 T 29-03-2018 IPR011032 GroES-like CHH28_RS10560 1fe2b90b5e0e024fd41779c28f39b6c8 97 PRINTS PR00297 10kDa chaperonin signature 3 18 3.2E-31 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CHH28_RS10560 1fe2b90b5e0e024fd41779c28f39b6c8 97 PRINTS PR00297 10kDa chaperonin signature 25 46 3.2E-31 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CHH28_RS10560 1fe2b90b5e0e024fd41779c28f39b6c8 97 PRINTS PR00297 10kDa chaperonin signature 60 72 3.2E-31 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CHH28_RS10560 1fe2b90b5e0e024fd41779c28f39b6c8 97 PRINTS PR00297 10kDa chaperonin signature 82 95 3.2E-31 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CHH28_RS10560 1fe2b90b5e0e024fd41779c28f39b6c8 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 26.182 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CHH28_RS10560 1fe2b90b5e0e024fd41779c28f39b6c8 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 29-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CHH28_RS13820 79521377a3274195718b0069b88be6df 189 Gene3D G3DSA:3.40.50.1820 1 176 2.5E-7 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS13820 79521377a3274195718b0069b88be6df 189 SUPERFAMILY SSF53474 1 173 1.49E-7 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS05585 1e95fbb5f62d335c9be450b8d8a40308 338 SUPERFAMILY SSF46785 10 79 3.87E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS05585 1e95fbb5f62d335c9be450b8d8a40308 338 Pfam PF08241 Methyltransferase domain 169 266 1.8E-17 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CHH28_RS05585 1e95fbb5f62d335c9be450b8d8a40308 338 SMART SM00418 16 88 3.2E-9 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CHH28_RS05585 1e95fbb5f62d335c9be450b8d8a40308 338 Gene3D G3DSA:1.10.10.10 3 82 5.0E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS05585 1e95fbb5f62d335c9be450b8d8a40308 338 SUPERFAMILY SSF53335 128 303 2.69E-31 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS05585 1e95fbb5f62d335c9be450b8d8a40308 338 Gene3D G3DSA:3.40.50.150 84 308 1.6E-27 T 29-03-2018 CHH28_RS05585 1e95fbb5f62d335c9be450b8d8a40308 338 Pfam PF12840 Helix-turn-helix domain 15 73 6.1E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS05585 1e95fbb5f62d335c9be450b8d8a40308 338 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 7.1E-10 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CHH28_RS05585 1e95fbb5f62d335c9be450b8d8a40308 338 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 7.1E-10 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CHH28_RS05585 1e95fbb5f62d335c9be450b8d8a40308 338 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 7.1E-10 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CHH28_RS17725 ae958cc188a732d7250724f521139ffe 99 Gene3D G3DSA:3.30.70.1060 1 98 4.0E-25 T 29-03-2018 CHH28_RS17725 ae958cc188a732d7250724f521139ffe 99 Pfam PF03795 YCII-related domain 1 95 3.7E-26 T 29-03-2018 IPR005545 YCII-related CHH28_RS17725 ae958cc188a732d7250724f521139ffe 99 SUPERFAMILY SSF54909 1 97 1.23E-30 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CHH28_RS12745 da937e382de02cf6de2ba1679cf701c8 321 Gene3D G3DSA:3.30.450.20 11 157 8.3E-12 T 29-03-2018 CHH28_RS12745 da937e382de02cf6de2ba1679cf701c8 321 SMART SM00091 12 78 1.7E-4 T 29-03-2018 IPR000014 PAS domain CHH28_RS12745 da937e382de02cf6de2ba1679cf701c8 321 SUPERFAMILY SSF55785 16 109 5.52E-10 T 29-03-2018 IPR000014 PAS domain CHH28_RS12745 da937e382de02cf6de2ba1679cf701c8 321 Gene3D G3DSA:3.30.70.270 158 321 1.8E-49 T 29-03-2018 CHH28_RS12745 da937e382de02cf6de2ba1679cf701c8 321 SUPERFAMILY SSF55073 161 318 5.89E-43 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS12745 da937e382de02cf6de2ba1679cf701c8 321 Pfam PF00989 PAS fold 17 66 5.8E-6 T 29-03-2018 IPR013767 PAS fold GO:0006355 CHH28_RS12745 da937e382de02cf6de2ba1679cf701c8 321 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 155 316 8.1E-48 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS12745 da937e382de02cf6de2ba1679cf701c8 321 Pfam PF00990 Diguanylate cyclase, GGDEF domain 157 313 5.4E-41 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS12745 da937e382de02cf6de2ba1679cf701c8 321 SMART SM00267 145 317 3.6E-46 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS00535 b6297dd06eb15716785eeaa9cf5d222d 202 SUPERFAMILY SSF48498 87 198 2.34E-12 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CHH28_RS00535 b6297dd06eb15716785eeaa9cf5d222d 202 Gene3D G3DSA:1.10.10.60 5 67 3.4E-12 T 29-03-2018 CHH28_RS00535 b6297dd06eb15716785eeaa9cf5d222d 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 1.1E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS00535 b6297dd06eb15716785eeaa9cf5d222d 202 Gene3D G3DSA:1.10.357.10 68 199 3.3E-15 T 29-03-2018 CHH28_RS00535 b6297dd06eb15716785eeaa9cf5d222d 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 5.2E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS00535 b6297dd06eb15716785eeaa9cf5d222d 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 5.2E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS00535 b6297dd06eb15716785eeaa9cf5d222d 202 SUPERFAMILY SSF46689 8 91 2.31E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS03985 cdc5bdeca755dbb3469fb1ff03fa6867 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.8E-50 T 29-03-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 CHH28_RS03985 cdc5bdeca755dbb3469fb1ff03fa6867 156 Gene3D G3DSA:1.20.5.620 62 122 2.4E-14 T 29-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain CHH28_RS03985 cdc5bdeca755dbb3469fb1ff03fa6867 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 6.7E-35 T 29-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CHH28_RS03985 cdc5bdeca755dbb3469fb1ff03fa6867 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.02 T 29-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CHH28_RS03985 cdc5bdeca755dbb3469fb1ff03fa6867 156 SUPERFAMILY SSF81573 63 121 1.44E-14 T 29-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain CHH28_RS08055 e8712520bab97955b379510a9f10708d 206 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 1 198 34.205 T 29-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 CHH28_RS08055 e8712520bab97955b379510a9f10708d 206 SUPERFAMILY SSF52507 1 198 3.14E-57 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CHH28_RS08055 e8712520bab97955b379510a9f10708d 206 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 2 196 4.3E-58 T 29-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 CHH28_RS08055 e8712520bab97955b379510a9f10708d 206 Pfam PF02441 Flavoprotein 1 177 7.0E-25 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CHH28_RS08055 e8712520bab97955b379510a9f10708d 206 Gene3D G3DSA:3.40.50.1950 1 206 4.6E-52 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CHH28_RS03305 2f6d3106dcfc54c3e255e90765420655 411 Pfam PF01494 FAD binding domain 6 326 3.8E-25 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 CHH28_RS03305 2f6d3106dcfc54c3e255e90765420655 411 Gene3D G3DSA:3.50.50.60 1 325 4.6E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS03305 2f6d3106dcfc54c3e255e90765420655 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 6.4E-12 T 29-03-2018 CHH28_RS03305 2f6d3106dcfc54c3e255e90765420655 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 320 6.4E-12 T 29-03-2018 CHH28_RS03305 2f6d3106dcfc54c3e255e90765420655 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 304 6.4E-12 T 29-03-2018 CHH28_RS03305 2f6d3106dcfc54c3e255e90765420655 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 165 180 6.4E-12 T 29-03-2018 CHH28_RS03305 2f6d3106dcfc54c3e255e90765420655 411 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 399 3.8E-113 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CHH28_RS03305 2f6d3106dcfc54c3e255e90765420655 411 SUPERFAMILY SSF51905 6 186 8.1E-46 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS03305 2f6d3106dcfc54c3e255e90765420655 411 SUPERFAMILY SSF51905 276 393 8.1E-46 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS03305 2f6d3106dcfc54c3e255e90765420655 411 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 7 399 9.6E-120 T 29-03-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 CHH28_RS00295 d87ed1afe4161f03892da621ade25603 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 7 300 4.5E-98 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS00295 d87ed1afe4161f03892da621ade25603 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 243 271 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS00295 d87ed1afe4161f03892da621ade25603 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 65 76 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS00295 d87ed1afe4161f03892da621ade25603 306 SUPERFAMILY SSF52440 6 98 1.44E-31 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CHH28_RS00295 d87ed1afe4161f03892da621ade25603 306 Pfam PF01820 D-ala D-ala ligase N-terminus 7 88 3.6E-20 T 29-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS00295 d87ed1afe4161f03892da621ade25603 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 5 301 34.461 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS00295 d87ed1afe4161f03892da621ade25603 306 SUPERFAMILY SSF56059 98 303 3.01E-54 T 29-03-2018 CHH28_RS00295 d87ed1afe4161f03892da621ade25603 306 Gene3D G3DSA:3.30.1490.20 100 167 1.4E-17 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CHH28_RS00295 d87ed1afe4161f03892da621ade25603 306 Gene3D G3DSA:3.40.50.20 1 99 1.5E-33 T 29-03-2018 CHH28_RS00295 d87ed1afe4161f03892da621ade25603 306 Gene3D G3DSA:3.30.470.20 168 306 5.6E-36 T 29-03-2018 CHH28_RS00295 d87ed1afe4161f03892da621ade25603 306 Pfam PF07478 D-ala D-ala ligase C-terminus 106 297 1.8E-52 T 29-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS00295 d87ed1afe4161f03892da621ade25603 306 PIRSF PIRSF039102 45 306 1.5E-85 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS00295 d87ed1afe4161f03892da621ade25603 306 PIRSF PIRSF039102 2 52 5.3E-9 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS19535 461b1066f7c4e78ea15e107a2d743887 338 SMART SM00267 188 336 0.0041 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS19535 461b1066f7c4e78ea15e107a2d743887 338 Pfam PF00990 Diguanylate cyclase, GGDEF domain 201 331 2.7E-9 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS19535 461b1066f7c4e78ea15e107a2d743887 338 Gene3D G3DSA:3.30.70.270 198 335 2.1E-14 T 29-03-2018 CHH28_RS19535 461b1066f7c4e78ea15e107a2d743887 338 SUPERFAMILY SSF55073 205 332 9.42E-12 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS05240 7be9c329865706a0a53356104a2872c3 108 PIRSF PIRSF000077 2 108 6.9E-45 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CHH28_RS05240 7be9c329865706a0a53356104a2872c3 108 PRINTS PR00421 Thioredoxin family signature 24 32 5.8E-10 T 29-03-2018 CHH28_RS05240 7be9c329865706a0a53356104a2872c3 108 PRINTS PR00421 Thioredoxin family signature 32 41 5.8E-10 T 29-03-2018 CHH28_RS05240 7be9c329865706a0a53356104a2872c3 108 PRINTS PR00421 Thioredoxin family signature 72 83 5.8E-10 T 29-03-2018 CHH28_RS05240 7be9c329865706a0a53356104a2872c3 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CHH28_RS05240 7be9c329865706a0a53356104a2872c3 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 8.4E-40 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CHH28_RS05240 7be9c329865706a0a53356104a2872c3 108 SUPERFAMILY SSF52833 2 107 2.6E-41 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS05240 7be9c329865706a0a53356104a2872c3 108 Gene3D G3DSA:3.40.30.10 1 108 3.5E-36 T 29-03-2018 CHH28_RS05240 7be9c329865706a0a53356104a2872c3 108 Pfam PF00085 Thioredoxin 5 106 1.8E-34 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 CHH28_RS07600 7c6a33ebc8eb5aa5935efccdde7aae33 284 Gene3D G3DSA:3.40.50.1820 1 278 2.1E-23 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS07600 7c6a33ebc8eb5aa5935efccdde7aae33 284 PIRSF PIRSF037442 1 282 6.6E-93 T 29-03-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 CHH28_RS07600 7c6a33ebc8eb5aa5935efccdde7aae33 284 Pfam PF12146 Serine aminopeptidase, S33 27 250 1.8E-16 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CHH28_RS07600 7c6a33ebc8eb5aa5935efccdde7aae33 284 SUPERFAMILY SSF53474 3 251 2.34E-29 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS14280 e1cd682e08b72423b1df64f9ca0d3cfc 115 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 28 107 1.2E-33 T 29-03-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 CHH28_RS14280 e1cd682e08b72423b1df64f9ca0d3cfc 115 Gene3D G3DSA:3.30.1390.10 18 110 1.3E-34 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CHH28_RS14280 e1cd682e08b72423b1df64f9ca0d3cfc 115 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 7 106 27.548 T 29-03-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CHH28_RS14280 e1cd682e08b72423b1df64f9ca0d3cfc 115 SUPERFAMILY SSF54736 26 109 4.45E-31 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CHH28_RS09370 4dbbf8b1ca84d98c689652615cd4c152 659 SUPERFAMILY SSF52172 3 109 1.13E-5 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS09370 4dbbf8b1ca84d98c689652615cd4c152 659 Pfam PF13426 PAS domain 124 215 4.4E-8 T 29-03-2018 IPR000014 PAS domain CHH28_RS09370 4dbbf8b1ca84d98c689652615cd4c152 659 Gene3D G3DSA:3.30.70.270 229 394 3.1E-34 T 29-03-2018 CHH28_RS09370 4dbbf8b1ca84d98c689652615cd4c152 659 SUPERFAMILY SSF55785 97 215 6.11E-13 T 29-03-2018 IPR000014 PAS domain CHH28_RS09370 4dbbf8b1ca84d98c689652615cd4c152 659 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 104 216 9.1E-10 T 29-03-2018 IPR000014 PAS domain CHH28_RS09370 4dbbf8b1ca84d98c689652615cd4c152 659 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 229 381 4.1E-27 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS09370 4dbbf8b1ca84d98c689652615cd4c152 659 Gene3D G3DSA:3.40.50.2300 1 100 2.9E-6 T 29-03-2018 CHH28_RS09370 4dbbf8b1ca84d98c689652615cd4c152 659 Gene3D G3DSA:3.30.450.20 101 228 4.6E-14 T 29-03-2018 CHH28_RS09370 4dbbf8b1ca84d98c689652615cd4c152 659 SMART SM00052 407 653 6.0E-18 T 29-03-2018 IPR001633 EAL domain CHH28_RS09370 4dbbf8b1ca84d98c689652615cd4c152 659 SMART SM00267 221 397 2.2E-23 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS09370 4dbbf8b1ca84d98c689652615cd4c152 659 SUPERFAMILY SSF55073 237 385 5.49E-29 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS09370 4dbbf8b1ca84d98c689652615cd4c152 659 Gene3D G3DSA:3.20.20.450 395 657 2.1E-51 T 29-03-2018 IPR001633 EAL domain CHH28_RS09370 4dbbf8b1ca84d98c689652615cd4c152 659 SMART SM00091 108 174 1.2E-4 T 29-03-2018 IPR000014 PAS domain CHH28_RS09370 4dbbf8b1ca84d98c689652615cd4c152 659 SUPERFAMILY SSF141868 412 649 3.14E-45 T 29-03-2018 IPR001633 EAL domain CHH28_RS09370 4dbbf8b1ca84d98c689652615cd4c152 659 Pfam PF00563 EAL domain 413 648 2.2E-45 T 29-03-2018 IPR001633 EAL domain CHH28_RS09370 4dbbf8b1ca84d98c689652615cd4c152 659 Pfam PF00990 Diguanylate cyclase, GGDEF domain 234 385 2.2E-26 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS19365 5cb6eb3732b097bd8adf010fdc591a13 144 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 25 133 1.4E-50 T 29-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CHH28_RS19365 5cb6eb3732b097bd8adf010fdc591a13 144 SUPERFAMILY SSF57716 104 141 1.43E-9 T 29-03-2018 CHH28_RS19365 5cb6eb3732b097bd8adf010fdc591a13 144 SUPERFAMILY SSF109635 9 103 2.48E-33 T 29-03-2018 CHH28_RS19365 5cb6eb3732b097bd8adf010fdc591a13 144 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 21 143 29.84 T 29-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CHH28_RS19365 5cb6eb3732b097bd8adf010fdc591a13 144 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 102 136 2.6E-10 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CHH28_RS02145 df0ca6e94b7b09525f98d6a4562efbcc 446 Gene3D G3DSA:3.50.50.60 203 421 1.1E-7 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS02145 df0ca6e94b7b09525f98d6a4562efbcc 446 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 4 340 1.6E-120 T 29-03-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase CHH28_RS02145 df0ca6e94b7b09525f98d6a4562efbcc 446 Gene3D G3DSA:3.50.50.60 1 202 3.1E-11 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS02145 df0ca6e94b7b09525f98d6a4562efbcc 446 SUPERFAMILY SSF51905 1 270 1.95E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS07265 99a852948729e009a3a1220c339e472b 199 Pfam PF13580 SIS domain 23 145 2.2E-28 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CHH28_RS07265 99a852948729e009a3a1220c339e472b 199 SUPERFAMILY SSF53697 8 188 1.31E-45 T 29-03-2018 CHH28_RS07265 99a852948729e009a3a1220c339e472b 199 Gene3D G3DSA:3.40.50.10490 2 197 3.3E-37 T 29-03-2018 CHH28_RS08450 77c2fddf099a80e4abc7ed4e25ed1269 198 Pfam PF00355 Rieske [2Fe-2S] domain 56 179 3.3E-10 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CHH28_RS08450 77c2fddf099a80e4abc7ed4e25ed1269 198 SUPERFAMILY SSF50022 30 195 9.17E-39 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CHH28_RS08450 77c2fddf099a80e4abc7ed4e25ed1269 198 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 3 40 6.2E-13 T 29-03-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 CHH28_RS08450 77c2fddf099a80e4abc7ed4e25ed1269 198 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 192 3.4E-67 T 29-03-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 CHH28_RS08450 77c2fddf099a80e4abc7ed4e25ed1269 198 PRINTS PR00162 Rieske 2Fe-2S subunit signature 120 131 5.6E-7 T 29-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CHH28_RS08450 77c2fddf099a80e4abc7ed4e25ed1269 198 PRINTS PR00162 Rieske 2Fe-2S subunit signature 151 163 5.6E-7 T 29-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CHH28_RS08450 77c2fddf099a80e4abc7ed4e25ed1269 198 Gene3D G3DSA:1.20.5.510 4 33 1.3E-14 T 29-03-2018 CHH28_RS08450 77c2fddf099a80e4abc7ed4e25ed1269 198 Gene3D G3DSA:2.102.10.10 34 198 6.5E-40 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CHH28_RS12885 7bd11d835cadf4262057ea1c3720dd7d 477 SUPERFAMILY SSF47384 243 323 4.71E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS12885 7bd11d835cadf4262057ea1c3720dd7d 477 Pfam PF00512 His Kinase A (phospho-acceptor) domain 263 324 6.5E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS12885 7bd11d835cadf4262057ea1c3720dd7d 477 Gene3D G3DSA:1.10.287.130 250 319 2.8E-10 T 29-03-2018 CHH28_RS12885 7bd11d835cadf4262057ea1c3720dd7d 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 417 6.8E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS12885 7bd11d835cadf4262057ea1c3720dd7d 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 6.8E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS12885 7bd11d835cadf4262057ea1c3720dd7d 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 431 6.8E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS12885 7bd11d835cadf4262057ea1c3720dd7d 477 SUPERFAMILY SSF55874 328 471 5.37E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS12885 7bd11d835cadf4262057ea1c3720dd7d 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 470 4.0E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS12885 7bd11d835cadf4262057ea1c3720dd7d 477 SMART SM00388 260 325 2.9E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS12885 7bd11d835cadf4262057ea1c3720dd7d 477 Gene3D G3DSA:3.30.565.10 320 472 5.1E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS12885 7bd11d835cadf4262057ea1c3720dd7d 477 SMART SM00387 367 476 6.7E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS10010 4d1816c89236c1ba4d5b2a7f573a55ce 724 SUPERFAMILY SSF52540 314 441 1.68E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS10010 4d1816c89236c1ba4d5b2a7f573a55ce 724 SUPERFAMILY SSF52540 521 570 1.68E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS10010 4d1816c89236c1ba4d5b2a7f573a55ce 724 Gene3D G3DSA:3.40.50.300 305 559 2.1E-19 T 29-03-2018 CHH28_RS10010 4d1816c89236c1ba4d5b2a7f573a55ce 724 Pfam PF07728 AAA domain (dynein-related subfamily) 335 435 1.9E-7 T 29-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CHH28_RS10010 4d1816c89236c1ba4d5b2a7f573a55ce 724 Gene3D G3DSA:1.20.5.340 158 265 1.2E-4 T 29-03-2018 CHH28_RS10680 bd820cf1f8f71636bb8552c95fb687f4 412 Gene3D G3DSA:3.20.20.190 63 412 3.1E-53 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CHH28_RS10680 bd820cf1f8f71636bb8552c95fb687f4 412 SUPERFAMILY SSF51695 69 400 2.59E-61 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CHH28_RS10680 bd820cf1f8f71636bb8552c95fb687f4 412 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 71 395 5.7E-20 T 29-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 SUPERFAMILY SSF52172 534 646 2.42E-7 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 SUPERFAMILY SSF55874 347 517 4.98E-46 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 SUPERFAMILY SSF52172 669 794 8.54E-36 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 Gene3D G3DSA:3.30.565.10 362 523 2.8E-50 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 Gene3D G3DSA:1.20.120.160 799 916 4.1E-12 T 29-03-2018 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 518 1.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 460 1.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 499 1.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 474 1.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 SMART SM00387 405 521 1.7E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 Pfam PF00072 Response regulator receiver domain 671 782 2.4E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 Gene3D G3DSA:3.40.50.2300 524 662 3.5E-7 T 29-03-2018 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 Gene3D G3DSA:3.40.50.2300 665 798 1.0E-36 T 29-03-2018 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 SMART SM00304 201 253 2.6E-4 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 Gene3D G3DSA:1.10.287.130 284 354 5.9E-20 T 29-03-2018 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 Pfam PF01627 Hpt domain 825 902 1.1E-7 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 32 177 5.8E-22 T 29-03-2018 IPR019247 Histidine kinase BarA, N-terminal CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 Pfam PF00512 His Kinase A (phospho-acceptor) domain 294 358 1.7E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 SUPERFAMILY SSF47384 279 359 3.14E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 SMART SM00388 293 358 1.5E-25 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 SMART SM00448 534 640 0.24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 SMART SM00448 669 782 1.0E-33 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 SUPERFAMILY SSF47226 765 778 1.09E-15 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 SUPERFAMILY SSF47226 805 902 1.09E-15 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS11170 8c6b8030fb911ee69e2c11e8c3554ef1 931 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 405 520 2.0E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13525 3eb18640b1340bf7cd620fe45dd5f49a 317 SUPERFAMILY SSF53335 5 315 9.97E-56 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS13525 3eb18640b1340bf7cd620fe45dd5f49a 317 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 4 102 1.6E-8 T 29-03-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 CHH28_RS13525 3eb18640b1340bf7cd620fe45dd5f49a 317 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 37 315 3.6E-65 T 29-03-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 CHH28_RS13525 3eb18640b1340bf7cd620fe45dd5f49a 317 Gene3D G3DSA:3.30.70.1170 33 89 8.1E-5 T 29-03-2018 CHH28_RS13525 3eb18640b1340bf7cd620fe45dd5f49a 317 Gene3D G3DSA:3.40.50.150 97 317 3.9E-53 T 29-03-2018 CHH28_RS13525 3eb18640b1340bf7cd620fe45dd5f49a 317 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 298 315 3.1E-20 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS13525 3eb18640b1340bf7cd620fe45dd5f49a 317 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 88 102 3.1E-20 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS13525 3eb18640b1340bf7cd620fe45dd5f49a 317 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 117 127 3.1E-20 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS13525 3eb18640b1340bf7cd620fe45dd5f49a 317 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 184 196 3.1E-20 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS13525 3eb18640b1340bf7cd620fe45dd5f49a 317 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 235 251 3.1E-20 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS13525 3eb18640b1340bf7cd620fe45dd5f49a 317 Pfam PF01189 16S rRNA methyltransferase RsmB/F 107 313 5.1E-50 T 29-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS01350 914bab702beded15daf4b6ab52c5240d 125 Pfam PF04379 ApaG domain 18 102 4.2E-34 T 29-03-2018 IPR007474 ApaG domain CHH28_RS01350 914bab702beded15daf4b6ab52c5240d 125 SUPERFAMILY SSF110069 4 125 1.44E-46 T 29-03-2018 IPR007474 ApaG domain CHH28_RS01350 914bab702beded15daf4b6ab52c5240d 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 29.825 T 29-03-2018 IPR023065 Uncharacterised protein family ApaG CHH28_RS01350 914bab702beded15daf4b6ab52c5240d 125 Gene3D G3DSA:2.60.40.1470 2 125 2.2E-43 T 29-03-2018 IPR007474 ApaG domain CHH28_RS05005 05b5c3584816e06bbd43fef8a0b02c7c 256 Gene3D G3DSA:3.40.50.720 4 45 2.3E-10 T 29-03-2018 CHH28_RS05005 05b5c3584816e06bbd43fef8a0b02c7c 256 Gene3D G3DSA:3.40.50.720 46 256 6.2E-60 T 29-03-2018 CHH28_RS05005 05b5c3584816e06bbd43fef8a0b02c7c 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 253 1.5E-65 T 29-03-2018 CHH28_RS05005 05b5c3584816e06bbd43fef8a0b02c7c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.4E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS05005 05b5c3584816e06bbd43fef8a0b02c7c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.4E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS05005 05b5c3584816e06bbd43fef8a0b02c7c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.4E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS05005 05b5c3584816e06bbd43fef8a0b02c7c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 6.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS05005 05b5c3584816e06bbd43fef8a0b02c7c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 6.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS05005 05b5c3584816e06bbd43fef8a0b02c7c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 6.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS05005 05b5c3584816e06bbd43fef8a0b02c7c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 6.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS05005 05b5c3584816e06bbd43fef8a0b02c7c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 6.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS05005 05b5c3584816e06bbd43fef8a0b02c7c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 6.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS05005 05b5c3584816e06bbd43fef8a0b02c7c 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CHH28_RS05005 05b5c3584816e06bbd43fef8a0b02c7c 256 SUPERFAMILY SSF51735 11 255 2.86E-83 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS06265 1ba0356d9fedc0b40c64dae5680e8e94 234 SUPERFAMILY SSF52540 15 232 7.38E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS06265 1ba0356d9fedc0b40c64dae5680e8e94 234 Gene3D G3DSA:3.40.50.300 10 233 9.5E-61 T 29-03-2018 CHH28_RS06265 1ba0356d9fedc0b40c64dae5680e8e94 234 Pfam PF00005 ABC transporter 34 180 3.3E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS06265 1ba0356d9fedc0b40c64dae5680e8e94 234 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS06265 1ba0356d9fedc0b40c64dae5680e8e94 234 SMART SM00382 43 231 2.1E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS04540 2980455e78e8d542203a948f29aa2c81 356 SMART SM00257 33 81 0.0087 T 29-03-2018 IPR018392 LysM domain CHH28_RS04540 2980455e78e8d542203a948f29aa2c81 356 Gene3D G3DSA:3.10.350.10 28 83 7.6E-14 T 29-03-2018 CHH28_RS04540 2980455e78e8d542203a948f29aa2c81 356 Pfam PF01476 LysM domain 34 78 7.0E-12 T 29-03-2018 IPR018392 LysM domain CHH28_RS04540 2980455e78e8d542203a948f29aa2c81 356 SUPERFAMILY SSF54106 32 80 5.49E-7 T 29-03-2018 IPR018392 LysM domain CHH28_RS01265 3f24ff2b5b8dce7b99e86638a86e2983 194 Pfam PF02545 Maf-like protein 2 184 9.5E-43 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CHH28_RS01265 3f24ff2b5b8dce7b99e86638a86e2983 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 1.5E-50 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CHH28_RS01265 3f24ff2b5b8dce7b99e86638a86e2983 194 SUPERFAMILY SSF52972 1 183 1.83E-55 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CHH28_RS01265 3f24ff2b5b8dce7b99e86638a86e2983 194 Gene3D G3DSA:3.90.950.10 1 192 1.8E-55 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CHH28_RS01265 3f24ff2b5b8dce7b99e86638a86e2983 194 PIRSF PIRSF006305 1 191 2.8E-37 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CHH28_RS01265 3f24ff2b5b8dce7b99e86638a86e2983 194 Hamap MF_00528 Septum formation protein Maf [maf]. 2 189 29.174 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CHH28_RS04720 0dcd36626c2d844029217ed82d7b49eb 309 SMART SM00448 4 119 5.2E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS04720 0dcd36626c2d844029217ed82d7b49eb 309 Gene3D G3DSA:3.40.50.2300 1 291 3.7E-33 T 29-03-2018 CHH28_RS04720 0dcd36626c2d844029217ed82d7b49eb 309 SUPERFAMILY SSF52172 1 128 2.28E-32 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS04720 0dcd36626c2d844029217ed82d7b49eb 309 Pfam PF00072 Response regulator receiver domain 6 119 2.9E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS00355 60d5bf6f43b119f6724d4cba475151fb 269 Pfam PF00520 Ion transport protein 17 235 6.2E-46 T 29-03-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 CHH28_RS00355 60d5bf6f43b119f6724d4cba475151fb 269 PRINTS PR01433 Polycystic kidney disease type 2 protein (PKD2) signature 140 161 1.4E-5 T 29-03-2018 IPR003915 Polycystic kidney disease type 2 protein GO:0005509|GO:0016020 CHH28_RS00355 60d5bf6f43b119f6724d4cba475151fb 269 PRINTS PR01433 Polycystic kidney disease type 2 protein (PKD2) signature 204 225 1.4E-5 T 29-03-2018 IPR003915 Polycystic kidney disease type 2 protein GO:0005509|GO:0016020 CHH28_RS00355 60d5bf6f43b119f6724d4cba475151fb 269 PRINTS PR01433 Polycystic kidney disease type 2 protein (PKD2) signature 49 69 1.4E-5 T 29-03-2018 IPR003915 Polycystic kidney disease type 2 protein GO:0005509|GO:0016020 CHH28_RS00355 60d5bf6f43b119f6724d4cba475151fb 269 SUPERFAMILY SSF81324 17 231 4.32E-34 T 29-03-2018 CHH28_RS00355 60d5bf6f43b119f6724d4cba475151fb 269 Gene3D G3DSA:1.10.287.70 15 231 2.3E-46 T 29-03-2018 CHH28_RS13585 47a66c91ee35b59dd488d4b84f93d5ff 290 SUPERFAMILY SSF103481 202 282 1.7E-9 T 29-03-2018 CHH28_RS13585 47a66c91ee35b59dd488d4b84f93d5ff 290 SUPERFAMILY SSF103481 33 135 8.5E-10 T 29-03-2018 CHH28_RS13585 47a66c91ee35b59dd488d4b84f93d5ff 290 Pfam PF00892 EamA-like transporter family 2 131 3.2E-7 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS13585 47a66c91ee35b59dd488d4b84f93d5ff 290 Pfam PF00892 EamA-like transporter family 145 282 4.1E-15 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS07150 0f34bd4c6b7413080826c2ce0b0b777d 206 Gene3D G3DSA:2.70.70.10 29 186 8.0E-27 T 29-03-2018 CHH28_RS07150 0f34bd4c6b7413080826c2ce0b0b777d 206 Pfam PF01551 Peptidase family M23 68 164 6.9E-21 T 29-03-2018 IPR016047 Peptidase M23 CHH28_RS07150 0f34bd4c6b7413080826c2ce0b0b777d 206 SUPERFAMILY SSF51261 63 164 2.82E-26 T 29-03-2018 IPR011055 Duplicated hybrid motif CHH28_RS10090 340ad576733ad1914390bec61bc55868 452 Pfam PF01523 Putative modulator of DNA gyrase 14 308 1.3E-33 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CHH28_RS10090 340ad576733ad1914390bec61bc55868 452 Gene3D G3DSA:3.30.2290.10 7 189 2.0E-15 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain CHH28_RS10090 340ad576733ad1914390bec61bc55868 452 SUPERFAMILY SSF111283 9 445 1.96E-79 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CHH28_RS00150 c8f1a6e144750e90220bcf4d7eeef843 297 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CHH28_RS00150 c8f1a6e144750e90220bcf4d7eeef843 297 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 2 273 4.3E-79 T 29-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CHH28_RS00150 c8f1a6e144750e90220bcf4d7eeef843 297 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 269 2.2E-90 T 29-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CHH28_RS00150 c8f1a6e144750e90220bcf4d7eeef843 297 Gene3D G3DSA:1.10.8.10 1 84 6.7E-25 T 29-03-2018 CHH28_RS00150 c8f1a6e144750e90220bcf4d7eeef843 297 Gene3D G3DSA:3.40.50.150 85 274 1.1E-41 T 29-03-2018 CHH28_RS00150 c8f1a6e144750e90220bcf4d7eeef843 297 Pfam PF05175 Methyltransferase small domain 109 189 3.8E-19 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CHH28_RS00150 c8f1a6e144750e90220bcf4d7eeef843 297 SUPERFAMILY SSF53335 3 270 1.76E-58 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS00150 c8f1a6e144750e90220bcf4d7eeef843 297 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 273 44.052 T 29-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CHH28_RS09260 c5b0e1c7a5794335d7d0b06a06e7cee0 409 Pfam PF07690 Major Facilitator Superfamily 26 364 3.9E-34 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CHH28_RS09260 c5b0e1c7a5794335d7d0b06a06e7cee0 409 Gene3D G3DSA:1.20.1250.20 16 208 1.2E-26 T 29-03-2018 CHH28_RS09260 c5b0e1c7a5794335d7d0b06a06e7cee0 409 Gene3D G3DSA:1.20.1250.20 213 407 3.1E-14 T 29-03-2018 CHH28_RS09260 c5b0e1c7a5794335d7d0b06a06e7cee0 409 SUPERFAMILY SSF103473 17 404 4.32E-52 T 29-03-2018 IPR020846 Major facilitator superfamily domain CHH28_RS11685 885d5004298e58c5cb5b8b019c336666 331 Gene3D G3DSA:3.30.1490.20 33 138 9.3E-8 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CHH28_RS11685 885d5004298e58c5cb5b8b019c336666 331 Gene3D G3DSA:3.30.470.20 139 284 1.3E-18 T 29-03-2018 CHH28_RS11685 885d5004298e58c5cb5b8b019c336666 331 Pfam PF14397 Sugar-transfer associated ATP-grasp 19 291 4.6E-98 T 29-03-2018 CHH28_RS11685 885d5004298e58c5cb5b8b019c336666 331 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 3 316 6.3E-123 T 29-03-2018 IPR011758 Alpha-L-glutamate ligase-related protein CHH28_RS11685 885d5004298e58c5cb5b8b019c336666 331 SUPERFAMILY SSF56059 38 104 7.71E-19 T 29-03-2018 CHH28_RS11685 885d5004298e58c5cb5b8b019c336666 331 SUPERFAMILY SSF56059 135 197 7.71E-19 T 29-03-2018 CHH28_RS11685 885d5004298e58c5cb5b8b019c336666 331 SUPERFAMILY SSF56059 229 279 7.71E-19 T 29-03-2018 CHH28_RS19160 3d294486f09f7be1db12cc2440eaed30 371 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 146 362 9.1E-57 T 29-03-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 CHH28_RS19160 3d294486f09f7be1db12cc2440eaed30 371 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 97 5.5E-21 T 29-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CHH28_RS19160 3d294486f09f7be1db12cc2440eaed30 371 Gene3D G3DSA:3.40.140.10 1 124 7.0E-36 T 29-03-2018 CHH28_RS19160 3d294486f09f7be1db12cc2440eaed30 371 Pfam PF01872 RibD C-terminal domain 147 359 4.1E-50 T 29-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CHH28_RS19160 3d294486f09f7be1db12cc2440eaed30 371 PIRSF PIRSF006769 1 367 5.7E-132 T 29-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 CHH28_RS19160 3d294486f09f7be1db12cc2440eaed30 371 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 361 6.2E-121 T 29-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 CHH28_RS19160 3d294486f09f7be1db12cc2440eaed30 371 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CHH28_RS19160 3d294486f09f7be1db12cc2440eaed30 371 SUPERFAMILY SSF53927 3 143 2.01E-48 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CHH28_RS19160 3d294486f09f7be1db12cc2440eaed30 371 SUPERFAMILY SSF53597 145 364 6.19E-58 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CHH28_RS19160 3d294486f09f7be1db12cc2440eaed30 371 Gene3D G3DSA:3.40.430.10 125 367 7.7E-72 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CHH28_RS02800 67ba9589241a29168a2666a8a0e5effe 181 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 28 4.3E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CHH28_RS07015 87e9f83e73cb8718189ec854470919aa 265 SUPERFAMILY SSF53335 26 263 2.28E-32 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS07015 87e9f83e73cb8718189ec854470919aa 265 Pfam PF08241 Methyltransferase domain 46 144 2.0E-16 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CHH28_RS07015 87e9f83e73cb8718189ec854470919aa 265 Gene3D G3DSA:3.40.50.150 5 265 2.2E-34 T 29-03-2018 CHH28_RS09095 9aa31248bcd2ebd9f7b7cedc0da4be12 230 Gene3D G3DSA:3.40.50.1860 1 118 1.2E-30 T 29-03-2018 CHH28_RS09095 9aa31248bcd2ebd9f7b7cedc0da4be12 230 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 29-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS09095 9aa31248bcd2ebd9f7b7cedc0da4be12 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 8.9E-60 T 29-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS09095 9aa31248bcd2ebd9f7b7cedc0da4be12 230 SUPERFAMILY SSF53681 1 116 1.57E-34 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS09095 9aa31248bcd2ebd9f7b7cedc0da4be12 230 SUPERFAMILY SSF53681 119 228 3.43E-32 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS09095 9aa31248bcd2ebd9f7b7cedc0da4be12 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 230 2.9E-67 T 29-03-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 CHH28_RS09095 9aa31248bcd2ebd9f7b7cedc0da4be12 230 Gene3D G3DSA:3.40.50.1860 119 215 1.6E-24 T 29-03-2018 CHH28_RS14460 31bdc648456f42471ce0f59c29286769 547 Gene3D G3DSA:3.50.50.60 1 385 6.3E-46 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS14460 31bdc648456f42471ce0f59c29286769 547 SUPERFAMILY SSF51905 307 445 1.53E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS14460 31bdc648456f42471ce0f59c29286769 547 SUPERFAMILY SSF51905 3 209 1.53E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS14460 31bdc648456f42471ce0f59c29286769 547 Gene3D G3DSA:3.30.70.20 485 531 0.0017 T 29-03-2018 CHH28_RS14460 31bdc648456f42471ce0f59c29286769 547 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 178 193 1.1E-5 T 29-03-2018 CHH28_RS14460 31bdc648456f42471ce0f59c29286769 547 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 1.1E-5 T 29-03-2018 CHH28_RS14460 31bdc648456f42471ce0f59c29286769 547 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 6.4E-6 T 29-03-2018 CHH28_RS14460 31bdc648456f42471ce0f59c29286769 547 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 443 544 4.3E-48 T 29-03-2018 CHH28_RS14460 31bdc648456f42471ce0f59c29286769 547 SUPERFAMILY SSF54373 210 306 1.37E-33 T 29-03-2018 CHH28_RS14460 31bdc648456f42471ce0f59c29286769 547 SUPERFAMILY SSF54862 449 547 3.67E-28 T 29-03-2018 CHH28_RS08105 c9af38a68b4b4b387b54bd766f8587e3 334 Pfam PF06144 DNA polymerase III, delta subunit 20 188 5.9E-28 T 29-03-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 CHH28_RS08105 c9af38a68b4b4b387b54bd766f8587e3 334 Gene3D G3DSA:3.40.50.300 1 137 2.1E-22 T 29-03-2018 CHH28_RS08105 c9af38a68b4b4b387b54bd766f8587e3 334 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 327 3.9E-87 T 29-03-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 CHH28_RS08105 c9af38a68b4b4b387b54bd766f8587e3 334 Gene3D G3DSA:1.10.8.60 141 216 2.6E-19 T 29-03-2018 CHH28_RS08105 c9af38a68b4b4b387b54bd766f8587e3 334 Gene3D G3DSA:1.20.272.10 217 329 1.2E-28 T 29-03-2018 CHH28_RS08105 c9af38a68b4b4b387b54bd766f8587e3 334 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 213 327 2.1E-8 T 29-03-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS08105 c9af38a68b4b4b387b54bd766f8587e3 334 SUPERFAMILY SSF52540 1 207 7.97E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS08105 c9af38a68b4b4b387b54bd766f8587e3 334 SUPERFAMILY SSF48019 209 328 1.79E-27 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CHH28_RS04330 909ecef91eb2f02f2627a74aedf2a962 232 SUPERFAMILY SSF46785 3 87 4.17E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04330 909ecef91eb2f02f2627a74aedf2a962 232 Gene3D G3DSA:1.10.10.10 1 217 7.2E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04330 909ecef91eb2f02f2627a74aedf2a962 232 Pfam PF12840 Helix-turn-helix domain 9 67 4.1E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04330 909ecef91eb2f02f2627a74aedf2a962 232 SMART SM00418 8 87 1.1E-13 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CHH28_RS15995 195fb5a1deb97cd93714a7a9604d93a7 535 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 416 523 8.5E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS15995 195fb5a1deb97cd93714a7a9604d93a7 535 Gene3D G3DSA:1.10.287.130 275 366 2.2E-7 T 29-03-2018 CHH28_RS15995 195fb5a1deb97cd93714a7a9604d93a7 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 481 1.4E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS15995 195fb5a1deb97cd93714a7a9604d93a7 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 502 1.4E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS15995 195fb5a1deb97cd93714a7a9604d93a7 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 467 1.4E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS15995 195fb5a1deb97cd93714a7a9604d93a7 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 521 1.4E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS15995 195fb5a1deb97cd93714a7a9604d93a7 535 SUPERFAMILY SSF55874 374 522 5.37E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS15995 195fb5a1deb97cd93714a7a9604d93a7 535 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 49 125 2.1E-10 T 29-03-2018 IPR033414 Periplasmic sensor domain CHH28_RS15995 195fb5a1deb97cd93714a7a9604d93a7 535 Gene3D G3DSA:3.30.565.10 374 529 1.4E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS15995 195fb5a1deb97cd93714a7a9604d93a7 535 SMART SM00387 413 524 3.8E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS15995 195fb5a1deb97cd93714a7a9604d93a7 535 SUPERFAMILY SSF47384 283 367 1.33E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS07470 b40a509905ec2f5065d81fec023de0de 178 Pfam PF04229 GrpB protein 7 164 1.2E-54 T 29-03-2018 IPR007344 GrpB/Dephospho-CoA kinase CHH28_RS07470 b40a509905ec2f5065d81fec023de0de 178 SUPERFAMILY SSF81301 8 173 3.6E-54 T 29-03-2018 CHH28_RS07470 b40a509905ec2f5065d81fec023de0de 178 Gene3D G3DSA:3.30.460.10 1 174 2.8E-60 T 29-03-2018 CHH28_RS08295 70f94bf2477ba9395bc8ab42f83d8061 304 Pfam PF08338 Domain of unknown function (DUF1731) 255 300 3.9E-16 T 29-03-2018 IPR013549 Domain of unknown function DUF1731 CHH28_RS08295 70f94bf2477ba9395bc8ab42f83d8061 304 SUPERFAMILY SSF51735 1 295 1.2E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS08295 70f94bf2477ba9395bc8ab42f83d8061 304 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 5 297 1.1E-98 T 29-03-2018 IPR010099 Epimerase family protein SDR39U1 CHH28_RS08295 70f94bf2477ba9395bc8ab42f83d8061 304 Gene3D G3DSA:3.40.50.720 3 304 3.1E-33 T 29-03-2018 CHH28_RS08295 70f94bf2477ba9395bc8ab42f83d8061 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 220 1.8E-18 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CHH28_RS18420 5e7bfd953589f181a64f92a0c68b1a5e 204 SUPERFAMILY SSF52833 1 87 1.47E-18 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS18420 5e7bfd953589f181a64f92a0c68b1a5e 204 Gene3D G3DSA:1.20.1050.10 92 197 1.2E-23 T 29-03-2018 CHH28_RS18420 5e7bfd953589f181a64f92a0c68b1a5e 204 Gene3D G3DSA:3.40.30.10 1 91 1.8E-23 T 29-03-2018 CHH28_RS18420 5e7bfd953589f181a64f92a0c68b1a5e 204 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 75 1.0E-12 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CHH28_RS18420 5e7bfd953589f181a64f92a0c68b1a5e 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 136 198 1.3E-13 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CHH28_RS18420 5e7bfd953589f181a64f92a0c68b1a5e 204 SUPERFAMILY SSF47616 82 201 7.24E-26 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CHH28_RS05370 736c106a2d45130a597101045e6d3054 154 SUPERFAMILY SSF54690 3 149 4.32E-53 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CHH28_RS05370 736c106a2d45130a597101045e6d3054 154 Gene3D G3DSA:3.90.1170.40 1 149 4.5E-58 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CHH28_RS05370 736c106a2d45130a597101045e6d3054 154 Pfam PF02391 MoaE protein 6 119 1.3E-38 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CHH28_RS04890 70d6c5befbc8a84cf5706bad6b48b553 295 Hamap MF_00188 Protease HtpX [htpX]. 1 292 25.044 T 29-03-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 CHH28_RS04890 70d6c5befbc8a84cf5706bad6b48b553 295 Gene3D G3DSA:3.30.2010.10 72 165 1.1E-21 T 29-03-2018 CHH28_RS04890 70d6c5befbc8a84cf5706bad6b48b553 295 Pfam PF01435 Peptidase family M48 83 292 7.8E-43 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CHH28_RS15950 34a364ba600460a713bb97a4197f1d53 102 SUPERFAMILY SSF102705 2 100 8.63E-25 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CHH28_RS15950 34a364ba600460a713bb97a4197f1d53 102 Gene3D G3DSA:3.30.70.120 1 101 8.4E-44 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CHH28_RS00895 0282f02edb97e2f117a6ff12fd4349d9 367 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 9 363 3.0E-100 T 29-03-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 CHH28_RS00895 0282f02edb97e2f117a6ff12fd4349d9 367 Pfam PF00005 ABC transporter 24 162 3.6E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS00895 0282f02edb97e2f117a6ff12fd4349d9 367 Gene3D G3DSA:3.40.50.300 17 233 2.7E-51 T 29-03-2018 CHH28_RS00895 0282f02edb97e2f117a6ff12fd4349d9 367 Pfam PF03459 TOBE domain 295 363 5.1E-11 T 29-03-2018 IPR005116 Transport-associated OB, type 1 CHH28_RS00895 0282f02edb97e2f117a6ff12fd4349d9 367 SUPERFAMILY SSF52540 14 223 2.57E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS00895 0282f02edb97e2f117a6ff12fd4349d9 367 Gene3D G3DSA:2.40.50.100 278 362 1.3E-17 T 29-03-2018 CHH28_RS00895 0282f02edb97e2f117a6ff12fd4349d9 367 SMART SM00382 28 212 2.2E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS00895 0282f02edb97e2f117a6ff12fd4349d9 367 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS00895 0282f02edb97e2f117a6ff12fd4349d9 367 SUPERFAMILY SSF50331 240 363 3.4E-14 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CHH28_RS10360 5240181a85f4e678f0301d2a5df4508a 208 SUPERFAMILY SSF52540 4 201 5.7E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS10360 5240181a85f4e678f0301d2a5df4508a 208 Gene3D G3DSA:3.40.50.300 5 207 1.1E-60 T 29-03-2018 CHH28_RS10360 5240181a85f4e678f0301d2a5df4508a 208 PRINTS PR00988 Uridine kinase signature 38 49 2.6E-35 T 29-03-2018 CHH28_RS10360 5240181a85f4e678f0301d2a5df4508a 208 PRINTS PR00988 Uridine kinase signature 139 149 2.6E-35 T 29-03-2018 CHH28_RS10360 5240181a85f4e678f0301d2a5df4508a 208 PRINTS PR00988 Uridine kinase signature 175 188 2.6E-35 T 29-03-2018 CHH28_RS10360 5240181a85f4e678f0301d2a5df4508a 208 PRINTS PR00988 Uridine kinase signature 153 164 2.6E-35 T 29-03-2018 CHH28_RS10360 5240181a85f4e678f0301d2a5df4508a 208 PRINTS PR00988 Uridine kinase signature 83 98 2.6E-35 T 29-03-2018 CHH28_RS10360 5240181a85f4e678f0301d2a5df4508a 208 PRINTS PR00988 Uridine kinase signature 8 25 2.6E-35 T 29-03-2018 CHH28_RS10360 5240181a85f4e678f0301d2a5df4508a 208 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 11 195 7.1E-45 T 29-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 CHH28_RS10360 5240181a85f4e678f0301d2a5df4508a 208 TIGRFAM TIGR00235 udk: uridine kinase 8 207 1.1E-83 T 29-03-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 CHH28_RS14640 269ce8682d09a42b8e0cfe354a5c5ed0 869 SUPERFAMILY SSF141571 732 856 3.01E-17 T 29-03-2018 CHH28_RS14640 269ce8682d09a42b8e0cfe354a5c5ed0 869 Gene3D G3DSA:2.160.20.80 666 794 8.2E-19 T 29-03-2018 CHH28_RS14640 269ce8682d09a42b8e0cfe354a5c5ed0 869 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 20 294 3.7E-68 T 29-03-2018 IPR018683 Domain of unknown function DUF2169 CHH28_RS14640 269ce8682d09a42b8e0cfe354a5c5ed0 869 Gene3D G3DSA:2.160.10.20 614 665 3.5E-15 T 29-03-2018 CHH28_RS14640 269ce8682d09a42b8e0cfe354a5c5ed0 869 Gene3D G3DSA:2.160.10.20 795 866 3.1E-5 T 29-03-2018 CHH28_RS14640 269ce8682d09a42b8e0cfe354a5c5ed0 869 Gene3D G3DSA:2.160.10.20 544 613 3.1E-17 T 29-03-2018 CHH28_RS14640 269ce8682d09a42b8e0cfe354a5c5ed0 869 SUPERFAMILY SSF141571 550 696 2.09E-32 T 29-03-2018 CHH28_RS14640 269ce8682d09a42b8e0cfe354a5c5ed0 869 Pfam PF13599 Pentapeptide repeats (9 copies) 751 825 2.8E-8 T 29-03-2018 IPR001646 Pentapeptide repeat CHH28_RS14640 269ce8682d09a42b8e0cfe354a5c5ed0 869 Pfam PF13599 Pentapeptide repeats (9 copies) 566 639 4.6E-10 T 29-03-2018 IPR001646 Pentapeptide repeat CHH28_RS03745 e9b9ae2aadfcbeaebd757c7cae4b92a3 195 Pfam PF01909 Nucleotidyltransferase domain 22 84 3.9E-5 T 29-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CHH28_RS03745 e9b9ae2aadfcbeaebd757c7cae4b92a3 195 SUPERFAMILY SSF81301 6 74 1.7E-7 T 29-03-2018 CHH28_RS03745 e9b9ae2aadfcbeaebd757c7cae4b92a3 195 Gene3D G3DSA:3.30.460.10 2 173 7.9E-8 T 29-03-2018 CHH28_RS17010 a8571dc102f699a205aef35e5919619d 164 PIRSF PIRSF001338 1 162 2.6E-70 T 29-03-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 CHH28_RS17010 a8571dc102f699a205aef35e5919619d 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 159 1.1E-67 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CHH28_RS17010 a8571dc102f699a205aef35e5919619d 164 SMART SM01001 3 154 4.6E-106 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CHH28_RS17010 a8571dc102f699a205aef35e5919619d 164 Pfam PF00731 AIR carboxylase 5 152 2.5E-66 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CHH28_RS17010 a8571dc102f699a205aef35e5919619d 164 Gene3D G3DSA:3.40.50.7700 1 160 1.3E-67 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CHH28_RS17010 a8571dc102f699a205aef35e5919619d 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 33.077 T 29-03-2018 IPR033747 Class I PurE CHH28_RS17010 a8571dc102f699a205aef35e5919619d 164 SUPERFAMILY SSF52255 4 160 8.24E-68 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CHH28_RS18585 d87440819e9b545f0fe7cc2418832ef0 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.5E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS18585 d87440819e9b545f0fe7cc2418832ef0 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.5E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS18585 d87440819e9b545f0fe7cc2418832ef0 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.5E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS18585 d87440819e9b545f0fe7cc2418832ef0 306 Pfam PF03466 LysR substrate binding domain 88 293 4.9E-42 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS18585 d87440819e9b545f0fe7cc2418832ef0 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.0E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS18585 d87440819e9b545f0fe7cc2418832ef0 306 Gene3D G3DSA:3.40.190.10 181 264 6.7E-16 T 29-03-2018 CHH28_RS18585 d87440819e9b545f0fe7cc2418832ef0 306 SUPERFAMILY SSF46785 2 112 9.31E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS18585 d87440819e9b545f0fe7cc2418832ef0 306 SUPERFAMILY SSF53850 90 293 1.03E-39 T 29-03-2018 CHH28_RS18585 d87440819e9b545f0fe7cc2418832ef0 306 Gene3D G3DSA:3.40.190.10 93 180 1.0E-20 T 29-03-2018 CHH28_RS18585 d87440819e9b545f0fe7cc2418832ef0 306 Gene3D G3DSA:1.10.10.10 2 92 4.3E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS06195 07622ee301bdbf50433edaeb66a934f6 142 Gene3D G3DSA:3.30.300.20 2 141 3.0E-31 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CHH28_RS06195 07622ee301bdbf50433edaeb66a934f6 142 SUPERFAMILY SSF82784 8 140 3.66E-33 T 29-03-2018 IPR003718 OsmC/Ohr family CHH28_RS06195 07622ee301bdbf50433edaeb66a934f6 142 Pfam PF02566 OsmC-like protein 42 140 5.4E-19 T 29-03-2018 IPR003718 OsmC/Ohr family CHH28_RS18485 b05c9756c60636068a9c73aef61d8fe8 530 Gene3D G3DSA:3.40.50.300 2 282 4.0E-48 T 29-03-2018 CHH28_RS18485 b05c9756c60636068a9c73aef61d8fe8 530 SMART SM00382 344 512 3.8E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS18485 b05c9756c60636068a9c73aef61d8fe8 530 SMART SM00382 26 238 5.4E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS18485 b05c9756c60636068a9c73aef61d8fe8 530 Gene3D G3DSA:3.40.50.300 283 530 2.8E-46 T 29-03-2018 CHH28_RS18485 b05c9756c60636068a9c73aef61d8fe8 530 Pfam PF12848 ABC transporter 224 309 4.6E-20 T 29-03-2018 IPR032781 ABC-transporter extension domain CHH28_RS18485 b05c9756c60636068a9c73aef61d8fe8 530 SUPERFAMILY SSF52540 297 523 4.33E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS18485 b05c9756c60636068a9c73aef61d8fe8 530 Pfam PF00005 ABC transporter 18 184 5.4E-19 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS18485 b05c9756c60636068a9c73aef61d8fe8 530 Pfam PF00005 ABC transporter 337 467 1.7E-20 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS18485 b05c9756c60636068a9c73aef61d8fe8 530 SUPERFAMILY SSF52540 6 237 1.75E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS03020 12a107b015c5c4e482fb059dd10f060b 200 Gene3D G3DSA:1.10.10.60 2 55 7.6E-13 T 29-03-2018 CHH28_RS03020 12a107b015c5c4e482fb059dd10f060b 200 SUPERFAMILY SSF46689 5 78 8.03E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS03020 12a107b015c5c4e482fb059dd10f060b 200 SUPERFAMILY SSF48498 81 190 6.99E-7 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CHH28_RS03020 12a107b015c5c4e482fb059dd10f060b 200 Gene3D G3DSA:1.10.357.10 56 194 6.7E-19 T 29-03-2018 CHH28_RS03020 12a107b015c5c4e482fb059dd10f060b 200 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 195 36.911 T 29-03-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 CHH28_RS03020 12a107b015c5c4e482fb059dd10f060b 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 7.9E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS05200 b71eb4783151f6b1e9a8844d88a5ca65 194 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 39 3.5E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS05200 b71eb4783151f6b1e9a8844d88a5ca65 194 Gene3D G3DSA:3.30.700.10 19 191 1.9E-17 T 29-03-2018 CHH28_RS05200 b71eb4783151f6b1e9a8844d88a5ca65 194 Pfam PF07963 Prokaryotic N-terminal methylation motif 17 39 3.7E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS05200 b71eb4783151f6b1e9a8844d88a5ca65 194 SUPERFAMILY SSF54523 19 111 3.37E-15 T 29-03-2018 CHH28_RS05200 b71eb4783151f6b1e9a8844d88a5ca65 194 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS00360 a67154d2f4c0facd646df4ba9d0025b0 436 Pfam PF00202 Aminotransferase class-III 33 429 4.1E-129 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS00360 a67154d2f4c0facd646df4ba9d0025b0 436 Gene3D G3DSA:3.90.1150.10 9 181 2.2E-47 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS00360 a67154d2f4c0facd646df4ba9d0025b0 436 SUPERFAMILY SSF53383 13 429 2.35E-131 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS00360 a67154d2f4c0facd646df4ba9d0025b0 436 PIRSF PIRSF000521 33 430 3.6E-31 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS00360 a67154d2f4c0facd646df4ba9d0025b0 436 Gene3D G3DSA:3.90.1150.10 261 433 4.8E-45 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS00360 a67154d2f4c0facd646df4ba9d0025b0 436 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 8 432 50.055 T 29-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CHH28_RS00360 a67154d2f4c0facd646df4ba9d0025b0 436 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 20 428 2.1E-181 T 29-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CHH28_RS00360 a67154d2f4c0facd646df4ba9d0025b0 436 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 250 287 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS17265 746a82626c1650e46af5a089006f90d3 141 Pfam PF13511 Domain of unknown function (DUF4124) 7 56 4.3E-12 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 CHH28_RS08160 015d2df170c19988b418ffef849e0d1c 371 SUPERFAMILY SSF50969 59 240 4.55E-13 T 29-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CHH28_RS08160 015d2df170c19988b418ffef849e0d1c 371 SUPERFAMILY SSF50969 328 355 4.55E-13 T 29-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CHH28_RS08160 015d2df170c19988b418ffef849e0d1c 371 Gene3D G3DSA:2.130.10.10 23 169 1.1E-6 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS08160 015d2df170c19988b418ffef849e0d1c 371 PIRSF PIRSF028101 1 370 1.2E-54 T 29-03-2018 IPR008311 Uncharacterised conserved protein UCP028101 CHH28_RS08160 015d2df170c19988b418ffef849e0d1c 371 Pfam PF07433 Protein of unknown function (DUF1513) 65 367 1.8E-62 T 29-03-2018 IPR008311 Uncharacterised conserved protein UCP028101 CHH28_RS08160 015d2df170c19988b418ffef849e0d1c 371 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 32 4.5E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CHH28_RS08160 015d2df170c19988b418ffef849e0d1c 371 Gene3D G3DSA:2.120.10.30 170 369 7.2E-6 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CHH28_RS02890 adaba392efdd7b870b90ae4835197a77 308 SUPERFAMILY SSF53474 5 154 1.29E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS02890 adaba392efdd7b870b90ae4835197a77 308 SUPERFAMILY SSF53474 221 305 1.29E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS02890 adaba392efdd7b870b90ae4835197a77 308 Pfam PF12146 Serine aminopeptidase, S33 32 283 1.3E-20 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CHH28_RS02890 adaba392efdd7b870b90ae4835197a77 308 Gene3D G3DSA:3.40.50.1820 1 307 1.9E-34 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS15280 e0f8c94bcbdad46d3da0b6da14fa166f 249 Gene3D G3DSA:3.40.190.10 29 128 1.4E-7 T 29-03-2018 CHH28_RS15280 e0f8c94bcbdad46d3da0b6da14fa166f 249 SUPERFAMILY SSF53850 29 249 2.5E-25 T 29-03-2018 CHH28_RS15280 e0f8c94bcbdad46d3da0b6da14fa166f 249 Gene3D G3DSA:3.40.190.10 133 249 1.6E-5 T 29-03-2018 CHH28_RS15280 e0f8c94bcbdad46d3da0b6da14fa166f 249 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 249 5.5E-7 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS09770 04a458ee75dbbda40c824f134438a8f0 147 Gene3D G3DSA:3.30.700.10 9 147 6.7E-30 T 29-03-2018 CHH28_RS09770 04a458ee75dbbda40c824f134438a8f0 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 28 1.0E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS09770 04a458ee75dbbda40c824f134438a8f0 147 SUPERFAMILY SSF54523 9 147 6.28E-24 T 29-03-2018 CHH28_RS09770 04a458ee75dbbda40c824f134438a8f0 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS09770 04a458ee75dbbda40c824f134438a8f0 147 Pfam PF00114 Pilin (bacterial filament) 37 147 7.6E-15 T 29-03-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 CHH28_RS09770 04a458ee75dbbda40c824f134438a8f0 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 6.3E-11 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS10355 4ba96d64f5ffcd01ea0350d223035cc9 415 Pfam PF07670 Nucleoside recognition 99 195 1.3E-8 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CHH28_RS10355 4ba96d64f5ffcd01ea0350d223035cc9 415 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 2.5E-20 T 29-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CHH28_RS10355 4ba96d64f5ffcd01ea0350d223035cc9 415 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 410 9.9E-143 T 29-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 CHH28_RS10355 4ba96d64f5ffcd01ea0350d223035cc9 415 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 410 4.0E-73 T 29-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CHH28_RS17275 a1df40b1600b82df4b81bea6ebe8543e 291 SUPERFAMILY SSF50249 184 288 3.66E-29 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS17275 a1df40b1600b82df4b81bea6ebe8543e 291 SUPERFAMILY SSF56091 36 209 4.32E-37 T 29-03-2018 CHH28_RS17275 a1df40b1600b82df4b81bea6ebe8543e 291 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 186 209 - T 29-03-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 CHH28_RS17275 a1df40b1600b82df4b81bea6ebe8543e 291 Pfam PF01068 ATP dependent DNA ligase domain 95 209 2.6E-8 T 29-03-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 CHH28_RS17275 a1df40b1600b82df4b81bea6ebe8543e 291 Gene3D G3DSA:3.30.470.30 62 152 6.9E-15 T 29-03-2018 CHH28_RS17275 a1df40b1600b82df4b81bea6ebe8543e 291 Gene3D G3DSA:3.30.1490.70 153 199 3.2E-10 T 29-03-2018 CHH28_RS17275 a1df40b1600b82df4b81bea6ebe8543e 291 Gene3D G3DSA:2.40.50.140 200 291 2.1E-20 T 29-03-2018 CHH28_RS17275 a1df40b1600b82df4b81bea6ebe8543e 291 Pfam PF14743 DNA ligase OB-like domain 223 288 2.9E-28 T 29-03-2018 IPR029319 DNA ligase, OB-like domain CHH28_RS19185 77d172738e0ac8cb46c273ba8737779b 314 Gene3D G3DSA:3.30.1330.10 2 145 2.5E-27 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CHH28_RS19185 77d172738e0ac8cb46c273ba8737779b 314 PIRSF PIRSF005303 1 314 1.0E-66 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CHH28_RS19185 77d172738e0ac8cb46c273ba8737779b 314 SUPERFAMILY SSF56042 144 297 1.36E-26 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CHH28_RS19185 77d172738e0ac8cb46c273ba8737779b 314 SUPERFAMILY SSF55326 5 140 8.02E-28 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CHH28_RS19185 77d172738e0ac8cb46c273ba8737779b 314 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 139 1.4E-18 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CHH28_RS19185 77d172738e0ac8cb46c273ba8737779b 314 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 5 314 1.5E-73 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CHH28_RS19185 77d172738e0ac8cb46c273ba8737779b 314 Gene3D G3DSA:3.90.650.10 146 314 6.8E-30 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CHH28_RS12925 179c2f1992daa0c70d6e8a83e7b63f77 295 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 241 283 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CHH28_RS12925 179c2f1992daa0c70d6e8a83e7b63f77 295 Gene3D G3DSA:1.10.10.60 185 239 2.1E-17 T 29-03-2018 CHH28_RS12925 179c2f1992daa0c70d6e8a83e7b63f77 295 Gene3D G3DSA:1.10.10.60 240 289 3.0E-14 T 29-03-2018 CHH28_RS12925 179c2f1992daa0c70d6e8a83e7b63f77 295 SMART SM00342 204 287 4.4E-28 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS12925 179c2f1992daa0c70d6e8a83e7b63f77 295 Pfam PF06719 AraC-type transcriptional regulator N-terminus 22 175 2.9E-38 T 29-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal CHH28_RS12925 179c2f1992daa0c70d6e8a83e7b63f77 295 Pfam PF12833 Helix-turn-helix domain 210 285 3.8E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS12925 179c2f1992daa0c70d6e8a83e7b63f77 295 SUPERFAMILY SSF46689 240 288 3.15E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS12925 179c2f1992daa0c70d6e8a83e7b63f77 295 SUPERFAMILY SSF46689 188 238 8.51E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS15445 b9f04de1d6383b58bdb1e9bd4b7d70de 635 Gene3D G3DSA:1.20.1560.10 4 381 2.6E-56 T 29-03-2018 CHH28_RS15445 b9f04de1d6383b58bdb1e9bd4b7d70de 635 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 10 632 2.1E-207 T 29-03-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 CHH28_RS15445 b9f04de1d6383b58bdb1e9bd4b7d70de 635 ProSitePatterns PS00211 ABC transporters family signature. 531 545 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS15445 b9f04de1d6383b58bdb1e9bd4b7d70de 635 Pfam PF00005 ABC transporter 409 559 9.3E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS15445 b9f04de1d6383b58bdb1e9bd4b7d70de 635 SMART SM00382 418 605 1.9E-19 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS15445 b9f04de1d6383b58bdb1e9bd4b7d70de 635 SUPERFAMILY SSF90123 11 50 1.83E-61 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS15445 b9f04de1d6383b58bdb1e9bd4b7d70de 635 SUPERFAMILY SSF90123 103 378 1.83E-61 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS15445 b9f04de1d6383b58bdb1e9bd4b7d70de 635 Pfam PF00664 ABC transporter transmembrane region 85 344 3.3E-43 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS15445 b9f04de1d6383b58bdb1e9bd4b7d70de 635 Gene3D G3DSA:3.40.50.300 382 635 5.7E-79 T 29-03-2018 CHH28_RS15445 b9f04de1d6383b58bdb1e9bd4b7d70de 635 SUPERFAMILY SSF52540 381 630 3.29E-96 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS04475 0564f5538c9f36d21b4e036aa9848526 326 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 9 300 2.0E-158 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CHH28_RS04475 0564f5538c9f36d21b4e036aa9848526 326 Gene3D G3DSA:3.30.930.10 1 217 6.4E-86 T 29-03-2018 CHH28_RS04475 0564f5538c9f36d21b4e036aa9848526 326 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 292 3.9E-149 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CHH28_RS04475 0564f5538c9f36d21b4e036aa9848526 326 Gene3D G3DSA:1.20.58.180 219 295 1.5E-35 T 29-03-2018 CHH28_RS04475 0564f5538c9f36d21b4e036aa9848526 326 SUPERFAMILY SSF55681 10 293 4.59E-134 T 29-03-2018 CHH28_RS04475 0564f5538c9f36d21b4e036aa9848526 326 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 4.0E-67 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CHH28_RS04475 0564f5538c9f36d21b4e036aa9848526 326 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 4.0E-67 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CHH28_RS04475 0564f5538c9f36d21b4e036aa9848526 326 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 4.0E-67 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CHH28_RS04475 0564f5538c9f36d21b4e036aa9848526 326 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 4.0E-67 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CHH28_RS04475 0564f5538c9f36d21b4e036aa9848526 326 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 4.0E-67 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CHH28_RS04475 0564f5538c9f36d21b4e036aa9848526 326 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 4.0E-67 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CHH28_RS04475 0564f5538c9f36d21b4e036aa9848526 326 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 294 60.108 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CHH28_RS05165 319100e1b1d65691b43dfa246a222e80 164 Pfam PF07681 DoxX 20 106 8.3E-20 T 29-03-2018 IPR032808 DoxX family CHH28_RS19295 5b5530c1f6a8bda33648b27ff861da50 259 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 4 226 2.6E-37 T 29-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CHH28_RS19295 5b5530c1f6a8bda33648b27ff861da50 259 Pfam PF13344 Haloacid dehalogenase-like hydrolase 4 99 1.2E-18 T 29-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CHH28_RS19295 5b5530c1f6a8bda33648b27ff861da50 259 SUPERFAMILY SSF56784 1 249 2.53E-48 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS19295 5b5530c1f6a8bda33648b27ff861da50 259 Pfam PF13242 HAD-hyrolase-like 176 248 3.1E-18 T 29-03-2018 CHH28_RS19295 5b5530c1f6a8bda33648b27ff861da50 259 Gene3D G3DSA:3.40.50.1000 1 258 4.3E-36 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS19295 5b5530c1f6a8bda33648b27ff861da50 259 TIGRFAM TIGR01458 HAD-SF-IIA-hyp3: HAD hydrolase, TIGR01458 family 1 240 3.2E-60 T 29-03-2018 IPR006355 HAD-superfamily hydrolase, LHPP/HDHD2 CHH28_RS04785 d9f657c23be836da4afb21413abb074f 298 Gene3D G3DSA:3.40.190.10 176 267 2.7E-25 T 29-03-2018 CHH28_RS04785 d9f657c23be836da4afb21413abb074f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.0E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS04785 d9f657c23be836da4afb21413abb074f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.0E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS04785 d9f657c23be836da4afb21413abb074f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.0E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS04785 d9f657c23be836da4afb21413abb074f 298 SUPERFAMILY SSF46785 1 85 9.62E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04785 d9f657c23be836da4afb21413abb074f 298 SUPERFAMILY SSF53850 87 295 4.96E-40 T 29-03-2018 CHH28_RS04785 d9f657c23be836da4afb21413abb074f 298 Gene3D G3DSA:3.40.190.10 87 175 2.2E-22 T 29-03-2018 CHH28_RS04785 d9f657c23be836da4afb21413abb074f 298 Pfam PF03466 LysR substrate binding domain 87 292 1.6E-45 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS04785 d9f657c23be836da4afb21413abb074f 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.2E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS04785 d9f657c23be836da4afb21413abb074f 298 Gene3D G3DSA:1.10.10.10 1 82 1.3E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS05045 719cf5e2276be057128e24cac54f59d7 257 SMART SM00345 37 95 1.8E-13 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS05045 719cf5e2276be057128e24cac54f59d7 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 33 95 2.9E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS05045 719cf5e2276be057128e24cac54f59d7 257 Gene3D G3DSA:1.10.10.10 19 97 6.9E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS05045 719cf5e2276be057128e24cac54f59d7 257 SUPERFAMILY SSF46785 29 120 3.42E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS05045 719cf5e2276be057128e24cac54f59d7 257 Pfam PF07729 FCD domain 105 228 1.0E-17 T 29-03-2018 IPR011711 GntR, C-terminal CHH28_RS05045 719cf5e2276be057128e24cac54f59d7 257 Gene3D G3DSA:1.20.120.530 101 244 2.4E-23 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CHH28_RS05045 719cf5e2276be057128e24cac54f59d7 257 SUPERFAMILY SSF48008 103 236 6.54E-24 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CHH28_RS05045 719cf5e2276be057128e24cac54f59d7 257 SMART SM00895 105 229 2.2E-12 T 29-03-2018 IPR011711 GntR, C-terminal CHH28_RS04520 ebd55205060d4eb1c49d42ae6b14f7ff 457 Gene3D G3DSA:3.40.50.720 2 138 8.9E-24 T 29-03-2018 CHH28_RS04520 ebd55205060d4eb1c49d42ae6b14f7ff 457 SUPERFAMILY SSF51735 231 375 7.04E-31 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS04520 ebd55205060d4eb1c49d42ae6b14f7ff 457 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 5.7E-28 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CHH28_RS04520 ebd55205060d4eb1c49d42ae6b14f7ff 457 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 5.7E-28 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CHH28_RS04520 ebd55205060d4eb1c49d42ae6b14f7ff 457 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 5.7E-28 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CHH28_RS04520 ebd55205060d4eb1c49d42ae6b14f7ff 457 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 5.7E-28 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CHH28_RS04520 ebd55205060d4eb1c49d42ae6b14f7ff 457 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 5.7E-28 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CHH28_RS04520 ebd55205060d4eb1c49d42ae6b14f7ff 457 Pfam PF02080 TrkA-C domain 390 450 5.2E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CHH28_RS04520 ebd55205060d4eb1c49d42ae6b14f7ff 457 Pfam PF02080 TrkA-C domain 161 221 8.2E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CHH28_RS04520 ebd55205060d4eb1c49d42ae6b14f7ff 457 SUPERFAMILY SSF116726 135 222 1.02E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CHH28_RS04520 ebd55205060d4eb1c49d42ae6b14f7ff 457 Gene3D G3DSA:3.30.70.1450 366 457 6.1E-17 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CHH28_RS04520 ebd55205060d4eb1c49d42ae6b14f7ff 457 Gene3D G3DSA:3.30.70.1450 139 227 3.7E-15 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CHH28_RS04520 ebd55205060d4eb1c49d42ae6b14f7ff 457 SUPERFAMILY SSF116726 360 437 1.83E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CHH28_RS04520 ebd55205060d4eb1c49d42ae6b14f7ff 457 Pfam PF02254 TrkA-N domain 234 349 8.7E-23 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CHH28_RS04520 ebd55205060d4eb1c49d42ae6b14f7ff 457 Pfam PF02254 TrkA-N domain 3 106 1.2E-25 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CHH28_RS04520 ebd55205060d4eb1c49d42ae6b14f7ff 457 Gene3D G3DSA:3.40.50.720 228 348 2.0E-19 T 29-03-2018 CHH28_RS04520 ebd55205060d4eb1c49d42ae6b14f7ff 457 SUPERFAMILY SSF51735 1 151 1.23E-32 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS15190 cb045035abc0a9c35b1147e3ed08a6c6 465 SMART SM01079 49 224 4.4E-34 T 29-03-2018 IPR006189 CHASE domain CHH28_RS15190 cb045035abc0a9c35b1147e3ed08a6c6 465 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 447 2.7E-42 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS15190 cb045035abc0a9c35b1147e3ed08a6c6 465 Pfam PF03924 CHASE domain 111 196 2.2E-13 T 29-03-2018 IPR006189 CHASE domain CHH28_RS15190 cb045035abc0a9c35b1147e3ed08a6c6 465 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 292 449 3.8E-42 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS15190 cb045035abc0a9c35b1147e3ed08a6c6 465 Gene3D G3DSA:3.30.70.270 287 461 2.2E-47 T 29-03-2018 CHH28_RS15190 cb045035abc0a9c35b1147e3ed08a6c6 465 SMART SM00267 283 453 1.0E-42 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS15190 cb045035abc0a9c35b1147e3ed08a6c6 465 SUPERFAMILY SSF55073 299 449 4.45E-40 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS06070 58a84d5fa4d536cbea8345cbfdff901c 104 Gene3D G3DSA:2.30.30.30 1 92 2.6E-30 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CHH28_RS06070 58a84d5fa4d536cbea8345cbfdff901c 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 96 19.332 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06070 58a84d5fa4d536cbea8345cbfdff901c 104 SUPERFAMILY SSF50104 3 100 1.43E-32 T 29-03-2018 IPR008991 Translation protein SH3-like domain CHH28_RS06070 58a84d5fa4d536cbea8345cbfdff901c 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 2 102 2.7E-35 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06070 58a84d5fa4d536cbea8345cbfdff901c 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 102 2.2E-25 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06070 58a84d5fa4d536cbea8345cbfdff901c 104 SMART SM00739 3 30 0.0013 T 29-03-2018 IPR005824 KOW CHH28_RS06070 58a84d5fa4d536cbea8345cbfdff901c 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 29-03-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS03565 e081f87cfa6d54fa80fd2ae87b3e28d1 270 Gene3D G3DSA:3.40.50.1820 12 270 6.7E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS03565 e081f87cfa6d54fa80fd2ae87b3e28d1 270 SUPERFAMILY SSF53474 19 266 2.7E-39 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS03565 e081f87cfa6d54fa80fd2ae87b3e28d1 270 Pfam PF00561 alpha/beta hydrolase fold 42 163 5.5E-14 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS15265 aae935c64779dd7ad6bad9ac11d56486 506 SUPERFAMILY SSF53720 14 498 8.12E-163 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CHH28_RS15265 aae935c64779dd7ad6bad9ac11d56486 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CHH28_RS15265 aae935c64779dd7ad6bad9ac11d56486 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CHH28_RS15265 aae935c64779dd7ad6bad9ac11d56486 506 Gene3D G3DSA:3.40.309.10 279 480 4.5E-67 T 29-03-2018 CHH28_RS15265 aae935c64779dd7ad6bad9ac11d56486 506 Gene3D G3DSA:3.40.605.10 15 278 1.2E-90 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS15265 aae935c64779dd7ad6bad9ac11d56486 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 8.1E-166 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS15170 9c98b1e1f177b0da56ec05b94b9e9794 220 Gene3D G3DSA:3.40.109.10 1 214 2.0E-48 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CHH28_RS15170 9c98b1e1f177b0da56ec05b94b9e9794 220 SUPERFAMILY SSF55469 1 62 1.26E-41 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CHH28_RS15170 9c98b1e1f177b0da56ec05b94b9e9794 220 SUPERFAMILY SSF55469 121 218 1.26E-41 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CHH28_RS15170 9c98b1e1f177b0da56ec05b94b9e9794 220 Pfam PF00881 Nitroreductase family 8 195 5.9E-30 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CHH28_RS16045 eba595895810d953b6e1683fb09e5d18 182 Gene3D G3DSA:2.40.160.20 4 181 9.0E-7 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS16045 eba595895810d953b6e1683fb09e5d18 182 Pfam PF13505 Outer membrane protein beta-barrel domain 7 182 2.8E-7 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel CHH28_RS16045 eba595895810d953b6e1683fb09e5d18 182 SUPERFAMILY SSF56925 26 182 9.42E-7 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS07445 ce4dbe2be33fbe46d92a7c5eeeba1b7d 445 SUPERFAMILY SSF51569 2 444 8.06E-203 T 29-03-2018 CHH28_RS07445 ce4dbe2be33fbe46d92a7c5eeeba1b7d 445 Gene3D G3DSA:3.20.20.70 221 385 5.7E-8 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS07445 ce4dbe2be33fbe46d92a7c5eeeba1b7d 445 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 3 444 7.2E-213 T 29-03-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CHH28_RS07445 ce4dbe2be33fbe46d92a7c5eeeba1b7d 445 Pfam PF01474 Class-II DAHP synthetase family 3 440 1.1E-208 T 29-03-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CHH28_RS02100 a35c6e2b67dd8c6586e556c5d55f288a 748 PRINTS PR00723 Subtilisin serine protease family (S8) signature 152 171 5.8E-17 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CHH28_RS02100 a35c6e2b67dd8c6586e556c5d55f288a 748 PRINTS PR00723 Subtilisin serine protease family (S8) signature 229 242 5.8E-17 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CHH28_RS02100 a35c6e2b67dd8c6586e556c5d55f288a 748 PRINTS PR00723 Subtilisin serine protease family (S8) signature 596 612 5.8E-17 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related CHH28_RS02100 a35c6e2b67dd8c6586e556c5d55f288a 748 SUPERFAMILY SSF52743 493 674 8.66E-53 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS02100 a35c6e2b67dd8c6586e556c5d55f288a 748 SUPERFAMILY SSF52743 144 191 8.66E-53 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS02100 a35c6e2b67dd8c6586e556c5d55f288a 748 SUPERFAMILY SSF52743 231 344 8.66E-53 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS02100 a35c6e2b67dd8c6586e556c5d55f288a 748 Gene3D G3DSA:3.40.50.200 139 676 6.5E-64 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS02100 a35c6e2b67dd8c6586e556c5d55f288a 748 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 233 243 - T 29-03-2018 IPR022398 Peptidase S8, subtilisin, His-active site CHH28_RS02100 a35c6e2b67dd8c6586e556c5d55f288a 748 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 597 607 - T 29-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site CHH28_RS02100 a35c6e2b67dd8c6586e556c5d55f288a 748 Pfam PF00082 Subtilase family 495 633 8.6E-18 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS02100 a35c6e2b67dd8c6586e556c5d55f288a 748 Pfam PF00082 Subtilase family 152 355 2.4E-19 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CHH28_RS02100 a35c6e2b67dd8c6586e556c5d55f288a 748 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 157 168 - T 29-03-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site CHH28_RS19635 1adcc48ea93c387fb9d5022c004d6581 82 Gene3D G3DSA:2.30.30.380 25 79 3.2E-4 T 29-03-2018 CHH28_RS14465 bf65252181ea1a80e285e74c33da746c 249 Gene3D G3DSA:3.40.50.620 1 248 7.8E-84 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS14465 bf65252181ea1a80e285e74c33da746c 249 Pfam PF01012 Electron transfer flavoprotein domain 30 206 7.6E-44 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CHH28_RS14465 bf65252181ea1a80e285e74c33da746c 249 SUPERFAMILY SSF52402 1 242 5.93E-83 T 29-03-2018 CHH28_RS14465 bf65252181ea1a80e285e74c33da746c 249 PIRSF PIRSF000090 1 249 3.1E-82 T 29-03-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CHH28_RS14465 bf65252181ea1a80e285e74c33da746c 249 SMART SM00893 23 211 1.6E-65 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CHH28_RS13390 fd71c82b4c75516c9e802c28d0b4771e 338 SUPERFAMILY SSF54631 183 311 4.93E-25 T 29-03-2018 CHH28_RS13390 fd71c82b4c75516c9e802c28d0b4771e 338 Pfam PF01595 Domain of unknown function DUF21 8 178 5.2E-27 T 29-03-2018 IPR002550 Domain of unknown function DUF21 CHH28_RS13390 fd71c82b4c75516c9e802c28d0b4771e 338 Gene3D G3DSA:3.20.20.70 128 333 3.4E-31 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS13390 fd71c82b4c75516c9e802c28d0b4771e 338 Pfam PF00571 CBS domain 193 245 5.1E-4 T 29-03-2018 IPR000644 CBS domain CHH28_RS08790 20de3532c2f8f38e1cb3202177fdce2c 160 SUPERFAMILY SSF142433 6 158 1.01E-53 T 29-03-2018 IPR008136 CinA, C-terminal CHH28_RS08790 20de3532c2f8f38e1cb3202177fdce2c 160 Gene3D G3DSA:3.90.950.20 2 160 7.8E-55 T 29-03-2018 CHH28_RS08790 20de3532c2f8f38e1cb3202177fdce2c 160 Pfam PF02464 Competence-damaged protein 11 155 4.6E-55 T 29-03-2018 IPR008136 CinA, C-terminal CHH28_RS08790 20de3532c2f8f38e1cb3202177fdce2c 160 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 11 154 1.2E-48 T 29-03-2018 IPR008136 CinA, C-terminal CHH28_RS11580 eb65cc2031eca6d357398a9755b05dad 204 Gene3D G3DSA:2.40.160.20 18 203 2.1E-10 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS11580 eb65cc2031eca6d357398a9755b05dad 204 SUPERFAMILY SSF56925 36 200 1.49E-10 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS11580 eb65cc2031eca6d357398a9755b05dad 204 Pfam PF13505 Outer membrane protein beta-barrel domain 18 201 2.7E-11 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel CHH28_RS09775 e0efa7ba754c43ad44276cf95517cba2 284 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 113 280 3.2E-58 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CHH28_RS09775 e0efa7ba754c43ad44276cf95517cba2 284 Gene3D G3DSA:3.20.20.70 138 271 2.2E-41 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS09775 e0efa7ba754c43ad44276cf95517cba2 284 SUPERFAMILY SSF54675 5 111 1.59E-33 T 29-03-2018 CHH28_RS09775 e0efa7ba754c43ad44276cf95517cba2 284 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 14 280 1.6E-96 T 29-03-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 CHH28_RS09775 e0efa7ba754c43ad44276cf95517cba2 284 Gene3D G3DSA:3.90.1170.20 2 137 2.0E-44 T 29-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CHH28_RS09775 e0efa7ba754c43ad44276cf95517cba2 284 PIRSF PIRSF006250 4 284 6.5E-104 T 29-03-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 CHH28_RS09775 e0efa7ba754c43ad44276cf95517cba2 284 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 25 110 1.5E-26 T 29-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CHH28_RS09775 e0efa7ba754c43ad44276cf95517cba2 284 SUPERFAMILY SSF51690 113 281 2.39E-58 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CHH28_RS12770 b78dc72f36a47b1dd5614987800ae656 144 Gene3D G3DSA:3.10.129.10 10 144 1.8E-16 T 29-03-2018 CHH28_RS12770 b78dc72f36a47b1dd5614987800ae656 144 SUPERFAMILY SSF54637 15 141 5.29E-19 T 29-03-2018 IPR029069 HotDog domain CHH28_RS12770 b78dc72f36a47b1dd5614987800ae656 144 Pfam PF03061 Thioesterase superfamily 59 131 6.3E-9 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CHH28_RS07890 923cff8061e141e100e9d32a0501f7c8 3113 Pfam PF13332 Haemagluttinin repeat 1407 1469 3.8E-5 T 29-03-2018 IPR025157 Hemagglutinin repeat CHH28_RS07890 923cff8061e141e100e9d32a0501f7c8 3113 Pfam PF13332 Haemagluttinin repeat 1473 1554 4.0E-7 T 29-03-2018 IPR025157 Hemagglutinin repeat CHH28_RS07890 923cff8061e141e100e9d32a0501f7c8 3113 Pfam PF13332 Haemagluttinin repeat 1556 1596 3.3E-5 T 29-03-2018 IPR025157 Hemagglutinin repeat CHH28_RS07890 923cff8061e141e100e9d32a0501f7c8 3113 Pfam PF13332 Haemagluttinin repeat 1943 2112 2.4E-20 T 29-03-2018 IPR025157 Hemagglutinin repeat CHH28_RS07890 923cff8061e141e100e9d32a0501f7c8 3113 SUPERFAMILY SSF56954 1837 1920 9.81E-9 T 29-03-2018 CHH28_RS07890 923cff8061e141e100e9d32a0501f7c8 3113 Gene3D G3DSA:2.160.20.10 304 415 0.0055 T 29-03-2018 IPR012334 Pectin lyase fold CHH28_RS07890 923cff8061e141e100e9d32a0501f7c8 3113 Gene3D G3DSA:2.160.20.10 416 580 0.2 T 29-03-2018 IPR012334 Pectin lyase fold CHH28_RS07890 923cff8061e141e100e9d32a0501f7c8 3113 Gene3D G3DSA:2.160.20.10 1 142 1.9E-5 T 29-03-2018 IPR012334 Pectin lyase fold CHH28_RS18190 1314ae94e6b2492d43e444109d571cb9 115 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 3 68 2.0E-21 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS17660 878cc64be38b0b7a2e774f2ce61e283a 357 PIRSF PIRSF000525 1 357 1.6E-152 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CHH28_RS17660 878cc64be38b0b7a2e774f2ce61e283a 357 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 356 50.683 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CHH28_RS17660 878cc64be38b0b7a2e774f2ce61e283a 357 Gene3D G3DSA:3.40.640.10 16 254 1.2E-30 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS17660 878cc64be38b0b7a2e774f2ce61e283a 357 Gene3D G3DSA:3.90.1150.10 255 355 6.5E-34 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS17660 878cc64be38b0b7a2e774f2ce61e283a 357 SUPERFAMILY SSF53383 1 355 1.32E-118 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS17660 878cc64be38b0b7a2e774f2ce61e283a 357 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 356 6.7E-155 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CHH28_RS17660 878cc64be38b0b7a2e774f2ce61e283a 357 Pfam PF00266 Aminotransferase class-V 5 345 1.6E-53 T 29-03-2018 IPR000192 Aminotransferase class V domain CHH28_RS11425 9ac553bd6c74fd9e693eca112e8570fe 277 Gene3D G3DSA:3.30.2010.10 51 154 1.5E-19 T 29-03-2018 CHH28_RS11425 9ac553bd6c74fd9e693eca112e8570fe 277 Pfam PF01435 Peptidase family M48 67 248 7.0E-31 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CHH28_RS05215 63fa74caae6fcbd80319f40a82f0cb2f 454 SUPERFAMILY SSF52540 248 450 1.53E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS05215 63fa74caae6fcbd80319f40a82f0cb2f 454 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 178 451 63.324 T 29-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CHH28_RS05215 63fa74caae6fcbd80319f40a82f0cb2f 454 Gene3D G3DSA:3.40.50.300 247 452 2.8E-38 T 29-03-2018 CHH28_RS05215 63fa74caae6fcbd80319f40a82f0cb2f 454 SMART SM00963 154 235 5.8E-26 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CHH28_RS05215 63fa74caae6fcbd80319f40a82f0cb2f 454 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 424 437 - T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CHH28_RS05215 63fa74caae6fcbd80319f40a82f0cb2f 454 Pfam PF02881 SRP54-type protein, helical bundle domain 166 231 7.4E-13 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CHH28_RS05215 63fa74caae6fcbd80319f40a82f0cb2f 454 SUPERFAMILY SSF47364 149 227 1.83E-22 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CHH28_RS05215 63fa74caae6fcbd80319f40a82f0cb2f 454 Gene3D G3DSA:1.20.120.140 148 246 2.4E-25 T 29-03-2018 CHH28_RS05215 63fa74caae6fcbd80319f40a82f0cb2f 454 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 179 450 1.1E-112 T 29-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CHH28_RS05215 63fa74caae6fcbd80319f40a82f0cb2f 454 SMART SM00382 249 429 1.3E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS05215 63fa74caae6fcbd80319f40a82f0cb2f 454 Pfam PF00448 SRP54-type protein, GTPase domain 251 450 6.6E-77 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CHH28_RS05215 63fa74caae6fcbd80319f40a82f0cb2f 454 SMART SM00962 250 451 3.4E-122 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CHH28_RS16565 831a8a486405dec19c9e98821e510beb 249 Gene3D G3DSA:3.40.50.300 1 249 1.0E-46 T 29-03-2018 CHH28_RS16565 831a8a486405dec19c9e98821e510beb 249 SMART SM00382 26 223 1.8E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS16565 831a8a486405dec19c9e98821e510beb 249 Pfam PF00005 ABC transporter 17 172 7.6E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS16565 831a8a486405dec19c9e98821e510beb 249 SUPERFAMILY SSF52540 2 230 3.01E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS16565 831a8a486405dec19c9e98821e510beb 249 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 3 244 2.0E-110 T 29-03-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 CHH28_RS18700 b8142eeecf2e5fe7fc86615480d422f4 272 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 7 246 4.5E-24 T 29-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CHH28_RS18700 b8142eeecf2e5fe7fc86615480d422f4 272 Gene3D G3DSA:3.40.50.300 6 247 2.5E-54 T 29-03-2018 CHH28_RS18700 b8142eeecf2e5fe7fc86615480d422f4 272 PIRSF PIRSF003092 1 270 1.8E-82 T 29-03-2018 IPR025501 ATP binding protein MinD CHH28_RS18700 b8142eeecf2e5fe7fc86615480d422f4 272 SUPERFAMILY SSF52540 7 260 5.82E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS05340 90d66c3cd28d7d1584eb658e69ca8fa0 198 Pfam PF02325 YGGT family 14 80 1.4E-16 T 29-03-2018 IPR003425 CCB3/YggT GO:0016020 CHH28_RS05340 90d66c3cd28d7d1584eb658e69ca8fa0 198 Pfam PF02325 YGGT family 108 177 5.9E-15 T 29-03-2018 IPR003425 CCB3/YggT GO:0016020 CHH28_RS13155 ea4eec276cf0a866c3a7f9acf1f281b1 188 Gene3D G3DSA:2.60.370.10 60 181 2.7E-25 T 29-03-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13155 ea4eec276cf0a866c3a7f9acf1f281b1 188 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 32 175 1.3E-33 T 29-03-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13155 ea4eec276cf0a866c3a7f9acf1f281b1 188 SUPERFAMILY SSF110111 60 179 2.62E-27 T 29-03-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS18805 870e296eb65e03306f1c187755e75e5e 120 Gene3D G3DSA:3.40.50.2300 1 120 1.6E-39 T 29-03-2018 CHH28_RS18805 870e296eb65e03306f1c187755e75e5e 120 SUPERFAMILY SSF52172 1 120 4.27E-41 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS18805 870e296eb65e03306f1c187755e75e5e 120 Pfam PF00072 Response regulator receiver domain 4 115 5.4E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS18805 870e296eb65e03306f1c187755e75e5e 120 SMART SM00448 2 115 1.3E-40 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS04080 dddc3d25659fb2b92950a48ab917702a 301 Gene3D G3DSA:1.10.10.10 1 83 4.8E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04080 dddc3d25659fb2b92950a48ab917702a 301 Gene3D G3DSA:3.40.190.10 175 261 9.2E-11 T 29-03-2018 CHH28_RS04080 dddc3d25659fb2b92950a48ab917702a 301 SUPERFAMILY SSF53850 87 293 2.28E-36 T 29-03-2018 CHH28_RS04080 dddc3d25659fb2b92950a48ab917702a 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 62 2.9E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS04080 dddc3d25659fb2b92950a48ab917702a 301 SUPERFAMILY SSF46785 6 109 1.42E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04080 dddc3d25659fb2b92950a48ab917702a 301 Pfam PF03466 LysR substrate binding domain 86 289 6.4E-31 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS04080 dddc3d25659fb2b92950a48ab917702a 301 Gene3D G3DSA:3.40.190.10 84 174 7.8E-14 T 29-03-2018 CHH28_RS09400 c9b61926a538d4e169da70539966294d 282 Gene3D G3DSA:3.40.250.10 1 145 4.6E-27 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS09400 c9b61926a538d4e169da70539966294d 282 SUPERFAMILY SSF52821 7 146 2.49E-31 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS09400 c9b61926a538d4e169da70539966294d 282 SUPERFAMILY SSF52821 150 277 9.43E-26 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS09400 c9b61926a538d4e169da70539966294d 282 Pfam PF00581 Rhodanese-like domain 155 266 1.6E-11 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS09400 c9b61926a538d4e169da70539966294d 282 Pfam PF00581 Rhodanese-like domain 28 123 1.3E-11 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS09400 c9b61926a538d4e169da70539966294d 282 Gene3D G3DSA:3.40.250.10 146 281 6.5E-23 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS09400 c9b61926a538d4e169da70539966294d 282 SMART SM00450 12 127 5.9E-14 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS09400 c9b61926a538d4e169da70539966294d 282 SMART SM00450 151 270 4.5E-14 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS02430 55a039fe1e2bdd40e588fac17969abea 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 6.7E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS02430 55a039fe1e2bdd40e588fac17969abea 299 Gene3D G3DSA:3.40.190.10 182 269 1.6E-26 T 29-03-2018 CHH28_RS02430 55a039fe1e2bdd40e588fac17969abea 299 SUPERFAMILY SSF46785 9 92 4.01E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS02430 55a039fe1e2bdd40e588fac17969abea 299 Gene3D G3DSA:3.40.190.10 93 181 5.4E-10 T 29-03-2018 CHH28_RS02430 55a039fe1e2bdd40e588fac17969abea 299 Gene3D G3DSA:1.10.10.10 7 88 3.5E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS02430 55a039fe1e2bdd40e588fac17969abea 299 Pfam PF03466 LysR substrate binding domain 92 298 4.7E-43 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS02430 55a039fe1e2bdd40e588fac17969abea 299 SUPERFAMILY SSF53850 92 298 1.81E-47 T 29-03-2018 CHH28_RS04885 f1986bd71a10e61ad09c0bac540d5e23 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 46 5.8E-6 T 29-03-2018 IPR001451 Hexapeptide repeat CHH28_RS04885 f1986bd71a10e61ad09c0bac540d5e23 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 130 2.7E-8 T 29-03-2018 IPR001451 Hexapeptide repeat CHH28_RS04885 f1986bd71a10e61ad09c0bac540d5e23 182 Gene3D G3DSA:2.160.10.10 1 181 4.1E-43 T 29-03-2018 CHH28_RS04885 f1986bd71a10e61ad09c0bac540d5e23 182 SUPERFAMILY SSF51161 4 174 6.38E-46 T 29-03-2018 IPR011004 Trimeric LpxA-like CHH28_RS19150 e8a90a67d2188f522bb7c708546e1f3c 485 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 432 9.6E-99 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CHH28_RS19150 e8a90a67d2188f522bb7c708546e1f3c 485 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 484 1.3E-202 T 29-03-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 CHH28_RS19150 e8a90a67d2188f522bb7c708546e1f3c 485 Pfam PF00474 Sodium:solute symporter family 35 432 6.8E-101 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CHH28_RS09250 491564f374cf935c51e294e2fe1e517e 263 SUPERFAMILY SSF63380 12 126 9.85E-14 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CHH28_RS09250 491564f374cf935c51e294e2fe1e517e 263 Pfam PF04954 Siderophore-interacting protein 133 245 1.3E-32 T 29-03-2018 IPR007037 Siderophore-interacting protein CHH28_RS09250 491564f374cf935c51e294e2fe1e517e 263 Pfam PF08021 Siderophore-interacting FAD-binding domain 20 125 7.6E-27 T 29-03-2018 IPR013113 FAD-binding 9, siderophore-interacting CHH28_RS09250 491564f374cf935c51e294e2fe1e517e 263 Gene3D G3DSA:2.40.30.10 8 127 6.3E-31 T 29-03-2018 CHH28_RS09250 491564f374cf935c51e294e2fe1e517e 263 Gene3D G3DSA:3.40.50.80 128 263 8.0E-40 T 29-03-2018 CHH28_RS07205 ca06b3778f9837599a9c15f9c2302fcb 447 Gene3D G3DSA:3.10.50.40 296 421 1.4E-13 T 29-03-2018 CHH28_RS07205 ca06b3778f9837599a9c15f9c2302fcb 447 Pfam PF13145 PPIC-type PPIASE domain 285 397 7.5E-7 T 29-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CHH28_RS07205 ca06b3778f9837599a9c15f9c2302fcb 447 SUPERFAMILY SSF54534 292 381 6.54E-9 T 29-03-2018 CHH28_RS06015 81470fbaaecbf391e4bea54c9a0e3012 210 Gene3D G3DSA:4.10.960.10 58 164 3.2E-35 T 29-03-2018 CHH28_RS06015 81470fbaaecbf391e4bea54c9a0e3012 210 ProSitePatterns PS00474 Ribosomal protein L3 signature. 100 123 - T 29-03-2018 IPR019926 Ribosomal protein L3, conserved site CHH28_RS06015 81470fbaaecbf391e4bea54c9a0e3012 210 SUPERFAMILY SSF50447 2 208 3.97E-83 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CHH28_RS06015 81470fbaaecbf391e4bea54c9a0e3012 210 Pfam PF00297 Ribosomal protein L3 95 181 1.2E-18 T 29-03-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06015 81470fbaaecbf391e4bea54c9a0e3012 210 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 203 3.1E-91 T 29-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06015 81470fbaaecbf391e4bea54c9a0e3012 210 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 206 39.473 T 29-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS10670 a79a394ebe9f77724118cb0936626f93 311 Gene3D G3DSA:3.40.190.10 19 151 1.5E-18 T 29-03-2018 CHH28_RS10670 a79a394ebe9f77724118cb0936626f93 311 Gene3D G3DSA:3.40.190.10 152 308 1.3E-29 T 29-03-2018 CHH28_RS10670 a79a394ebe9f77724118cb0936626f93 311 SUPERFAMILY SSF53850 23 307 3.22E-63 T 29-03-2018 CHH28_RS10670 a79a394ebe9f77724118cb0936626f93 311 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 11 307 1.1E-77 T 29-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family CHH28_RS10670 a79a394ebe9f77724118cb0936626f93 311 Pfam PF16868 NMT1-like family 27 306 2.7E-76 T 29-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family CHH28_RS17170 2aa78aae4fe7a2198d0b71aaf1004743 197 SUPERFAMILY SSF46565 87 193 9.16E-15 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS17170 2aa78aae4fe7a2198d0b71aaf1004743 197 Pfam PF00226 DnaJ domain 148 193 3.8E-11 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS17170 2aa78aae4fe7a2198d0b71aaf1004743 197 SMART SM00271 143 197 4.8E-12 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS17170 2aa78aae4fe7a2198d0b71aaf1004743 197 Pfam PF12339 DNA-J related protein 13 135 9.7E-34 T 29-03-2018 IPR021059 DnaJ-related protein, N-terminal CHH28_RS17170 2aa78aae4fe7a2198d0b71aaf1004743 197 Gene3D G3DSA:1.10.287.110 141 195 5.6E-16 T 29-03-2018 IPR001623 DnaJ domain CHH28_RS10745 b4bbad5a71ecefa7ce6d9488a11c9c0c 495 Pfam PF01740 STAS domain 404 484 6.8E-10 T 29-03-2018 IPR002645 STAS domain CHH28_RS10745 b4bbad5a71ecefa7ce6d9488a11c9c0c 495 SUPERFAMILY SSF52091 400 482 9.22E-12 T 29-03-2018 IPR002645 STAS domain CHH28_RS10745 b4bbad5a71ecefa7ce6d9488a11c9c0c 495 Gene3D G3DSA:3.30.750.24 393 483 7.9E-13 T 29-03-2018 IPR002645 STAS domain CHH28_RS10745 b4bbad5a71ecefa7ce6d9488a11c9c0c 495 Pfam PF00916 Sulfate permease family 14 143 6.6E-26 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CHH28_RS10745 b4bbad5a71ecefa7ce6d9488a11c9c0c 495 Pfam PF00916 Sulfate permease family 170 344 2.1E-24 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CHH28_RS10745 b4bbad5a71ecefa7ce6d9488a11c9c0c 495 ProSitePatterns PS01130 SLC26A transporters signature. 42 63 - T 29-03-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 CHH28_RS07565 3b674e6b48eb52b436ad56b4b33424be 193 Pfam PF07298 NnrU protein 4 190 1.3E-55 T 29-03-2018 IPR009915 NnrU domain CHH28_RS14650 3d7924d5aa9c702a57d78cc722e31410 175 Pfam PF12059 Protein of unknown function (DUF3540) 37 123 1.3E-8 T 29-03-2018 IPR021927 Protein of unknown function DUF3540 CHH28_RS06785 6ba4888fe5b7547d140ca972772f85ae 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 23 489 37.262 T 29-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CHH28_RS06785 6ba4888fe5b7547d140ca972772f85ae 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 356 486 9.5E-18 T 29-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CHH28_RS06785 6ba4888fe5b7547d140ca972772f85ae 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 211 343 8.5E-29 T 29-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CHH28_RS06785 6ba4888fe5b7547d140ca972772f85ae 494 Gene3D G3DSA:3.40.50.720 57 209 8.2E-50 T 29-03-2018 CHH28_RS06785 6ba4888fe5b7547d140ca972772f85ae 494 Gene3D G3DSA:3.40.50.720 2 43 7.6E-4 T 29-03-2018 CHH28_RS06785 6ba4888fe5b7547d140ca972772f85ae 494 SUPERFAMILY SSF48179 349 488 1.65E-43 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CHH28_RS06785 6ba4888fe5b7547d140ca972772f85ae 494 SUPERFAMILY SSF48179 211 371 3.57E-41 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CHH28_RS06785 6ba4888fe5b7547d140ca972772f85ae 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 36 368 1.9E-121 T 29-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CHH28_RS06785 6ba4888fe5b7547d140ca972772f85ae 494 Gene3D G3DSA:1.10.1040.10 211 491 4.6E-84 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CHH28_RS06785 6ba4888fe5b7547d140ca972772f85ae 494 SUPERFAMILY SSF51735 29 210 1.66E-59 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS06785 6ba4888fe5b7547d140ca972772f85ae 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 36 205 6.5E-60 T 29-03-2018 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CHH28_RS04140 f4cdbc7379f0cfab4c71e364d76b2405 286 Gene3D G3DSA:1.10.12.10 247 285 6.1E-4 T 29-03-2018 IPR014748 Crontonase, C-terminal CHH28_RS04140 f4cdbc7379f0cfab4c71e364d76b2405 286 Pfam PF00378 Enoyl-CoA hydratase/isomerase 44 285 9.8E-46 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CHH28_RS04140 f4cdbc7379f0cfab4c71e364d76b2405 286 Gene3D G3DSA:3.90.226.10 24 243 5.8E-50 T 29-03-2018 CHH28_RS04140 f4cdbc7379f0cfab4c71e364d76b2405 286 SUPERFAMILY SSF52096 42 284 7.03E-58 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS16810 c99285920510241cd4090e06289f331d 1143 Gene3D G3DSA:3.30.565.10 848 1006 4.0E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS16810 c99285920510241cd4090e06289f331d 1143 Gene3D G3DSA:3.30.450.20 632 792 7.7E-22 T 29-03-2018 CHH28_RS16810 c99285920510241cd4090e06289f331d 1143 Pfam PF12860 PAS fold 641 755 7.4E-44 T 29-03-2018 CHH28_RS16810 c99285920510241cd4090e06289f331d 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 8.6E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS16810 c99285920510241cd4090e06289f331d 1143 SUPERFAMILY SSF47384 773 853 1.65E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS16810 c99285920510241cd4090e06289f331d 1143 SUPERFAMILY SSF55874 844 1004 3.8E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS16810 c99285920510241cd4090e06289f331d 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1005 1.3E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS16810 c99285920510241cd4090e06289f331d 1143 SMART SM00388 788 853 3.6E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS16810 c99285920510241cd4090e06289f331d 1143 SMART SM00448 1027 1138 2.6E-6 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS16810 c99285920510241cd4090e06289f331d 1143 SMART SM00387 897 1006 3.0E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS16810 c99285920510241cd4090e06289f331d 1143 SUPERFAMILY SSF55785 626 748 1.08E-9 T 29-03-2018 IPR000014 PAS domain CHH28_RS16810 c99285920510241cd4090e06289f331d 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 1.9E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS16810 c99285920510241cd4090e06289f331d 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 1.9E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS16810 c99285920510241cd4090e06289f331d 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 1.9E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS16810 c99285920510241cd4090e06289f331d 1143 Pfam PF00072 Response regulator receiver domain 1030 1138 2.5E-8 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS16810 c99285920510241cd4090e06289f331d 1143 Gene3D G3DSA:3.40.50.2300 1015 1143 5.9E-17 T 29-03-2018 CHH28_RS16810 c99285920510241cd4090e06289f331d 1143 Gene3D G3DSA:1.10.287.130 793 847 4.6E-9 T 29-03-2018 CHH28_RS16810 c99285920510241cd4090e06289f331d 1143 SUPERFAMILY SSF52172 1027 1142 5.86E-16 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS18910 12bd48d505070217a7c6a3feddc21a9d 412 Gene3D G3DSA:1.20.1330.10 38 387 1.0E-33 T 29-03-2018 CHH28_RS18910 12bd48d505070217a7c6a3feddc21a9d 412 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 138 3.3E-22 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CHH28_RS18910 12bd48d505070217a7c6a3feddc21a9d 412 SUPERFAMILY SSF64518 1 412 3.27E-79 T 29-03-2018 CHH28_RS18910 12bd48d505070217a7c6a3feddc21a9d 412 Pfam PF00700 Bacterial flagellin C-terminal helical region 331 405 9.6E-8 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CHH28_RS18910 12bd48d505070217a7c6a3feddc21a9d 412 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 410 1.5E-89 T 29-03-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 CHH28_RS15110 d1e924465f9b8d121953f9267fe0190c 472 Gene3D G3DSA:3.30.499.10 329 472 6.5E-50 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS15110 d1e924465f9b8d121953f9267fe0190c 472 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CHH28_RS15110 d1e924465f9b8d121953f9267fe0190c 472 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 472 4.1E-225 T 29-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CHH28_RS15110 d1e924465f9b8d121953f9267fe0190c 472 Pfam PF00330 Aconitase family (aconitate hydratase) 8 464 2.0E-153 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS15110 d1e924465f9b8d121953f9267fe0190c 472 Gene3D G3DSA:3.30.499.10 1 159 1.3E-37 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS15110 d1e924465f9b8d121953f9267fe0190c 472 Gene3D G3DSA:3.40.1060.10 160 294 6.5E-39 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS15110 d1e924465f9b8d121953f9267fe0190c 472 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CHH28_RS15110 d1e924465f9b8d121953f9267fe0190c 472 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 472 58.675 T 29-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CHH28_RS15110 d1e924465f9b8d121953f9267fe0190c 472 PRINTS PR00415 Aconitase family signature 349 360 1.4E-45 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS15110 d1e924465f9b8d121953f9267fe0190c 472 PRINTS PR00415 Aconitase family signature 292 306 1.4E-45 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS15110 d1e924465f9b8d121953f9267fe0190c 472 PRINTS PR00415 Aconitase family signature 88 101 1.4E-45 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS15110 d1e924465f9b8d121953f9267fe0190c 472 PRINTS PR00415 Aconitase family signature 139 154 1.4E-45 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS15110 d1e924465f9b8d121953f9267fe0190c 472 PRINTS PR00415 Aconitase family signature 201 214 1.4E-45 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS15110 d1e924465f9b8d121953f9267fe0190c 472 PRINTS PR00415 Aconitase family signature 114 122 1.4E-45 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS15110 d1e924465f9b8d121953f9267fe0190c 472 PRINTS PR00415 Aconitase family signature 406 419 1.4E-45 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS15110 d1e924465f9b8d121953f9267fe0190c 472 PRINTS PR00415 Aconitase family signature 125 138 1.4E-45 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS15110 d1e924465f9b8d121953f9267fe0190c 472 PRINTS PR00415 Aconitase family signature 215 228 1.4E-45 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS15110 d1e924465f9b8d121953f9267fe0190c 472 SUPERFAMILY SSF53732 2 472 2.75E-157 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS01830 e71bd5fe5bb0d9039daaabf958d08407 376 Pfam PF03929 PepSY-associated TM region 8 353 4.6E-53 T 29-03-2018 IPR005625 PepSY-associated TM protein CHH28_RS00110 1c35677c77952658f19f950488089da0 301 Pfam PF13401 AAA domain 51 180 8.2E-24 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS00110 1c35677c77952658f19f950488089da0 301 Gene3D G3DSA:3.40.50.300 23 284 8.1E-12 T 29-03-2018 CHH28_RS00110 1c35677c77952658f19f950488089da0 301 SUPERFAMILY SSF52540 14 273 1.96E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS01495 1ebd0542a8340f88873fc28e1170d64c 260 SUPERFAMILY SSF53850 22 239 1.05E-21 T 29-03-2018 CHH28_RS01495 1ebd0542a8340f88873fc28e1170d64c 260 Gene3D G3DSA:3.40.190.10 18 141 5.3E-8 T 29-03-2018 CHH28_RS01495 1ebd0542a8340f88873fc28e1170d64c 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 212 2.7E-12 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS01495 1ebd0542a8340f88873fc28e1170d64c 260 Gene3D G3DSA:3.40.190.10 142 242 0.11 T 29-03-2018 CHH28_RS09425 2c333405632b8f008b0a269ab4bcd372 180 Hamap MF_00045 Oligoribonuclease [orn]. 2 180 42.378 T 29-03-2018 IPR022894 Oligoribonuclease GO:0000175 CHH28_RS09425 2c333405632b8f008b0a269ab4bcd372 180 Gene3D G3DSA:3.30.420.10 1 180 1.7E-27 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS09425 2c333405632b8f008b0a269ab4bcd372 180 SUPERFAMILY SSF53098 3 178 6.96E-47 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS09425 2c333405632b8f008b0a269ab4bcd372 180 SMART SM00479 6 179 1.8E-26 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CHH28_RS09425 2c333405632b8f008b0a269ab4bcd372 180 Pfam PF00929 Exonuclease 8 169 9.8E-36 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CHH28_RS02685 d599e81ed4046b80fe9cd32aa3020689 211 Gene3D G3DSA:1.10.10.60 5 66 1.6E-21 T 29-03-2018 CHH28_RS02685 d599e81ed4046b80fe9cd32aa3020689 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 3.1E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS02685 d599e81ed4046b80fe9cd32aa3020689 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 3.1E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS02685 d599e81ed4046b80fe9cd32aa3020689 211 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 63 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CHH28_RS02685 d599e81ed4046b80fe9cd32aa3020689 211 SUPERFAMILY SSF46689 9 76 1.12E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS02685 d599e81ed4046b80fe9cd32aa3020689 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 4.7E-17 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS02685 d599e81ed4046b80fe9cd32aa3020689 211 SUPERFAMILY SSF48498 87 170 1.24E-6 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CHH28_RS02685 d599e81ed4046b80fe9cd32aa3020689 211 Gene3D G3DSA:1.10.357.10 67 210 3.0E-15 T 29-03-2018 CHH28_RS14515 8dd523ddc8226d28760901a3e4a7c38f 403 PIRSF PIRSF015761 19 402 2.8E-39 T 29-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 CHH28_RS14515 8dd523ddc8226d28760901a3e4a7c38f 403 Pfam PF12693 GspL periplasmic domain 247 400 2.1E-24 T 29-03-2018 IPR025691 GspL periplasmic domain CHH28_RS14515 8dd523ddc8226d28760901a3e4a7c38f 403 Pfam PF05134 Type II secretion system (T2SS), protein L 36 131 6.5E-9 T 29-03-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain CHH28_RS14515 8dd523ddc8226d28760901a3e4a7c38f 403 SUPERFAMILY SSF53067 18 131 2.72E-15 T 29-03-2018 CHH28_RS16260 24ea5982742a2f775fb4e7713c46fb6e 332 Hamap MF_00469 UPF0176 protein YceA [yceA]. 7 259 46.227 T 29-03-2018 IPR020936 Uncharacterised protein family UPF0176 CHH28_RS16260 24ea5982742a2f775fb4e7713c46fb6e 332 SUPERFAMILY SSF52821 99 246 2.88E-31 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS16260 24ea5982742a2f775fb4e7713c46fb6e 332 Gene3D G3DSA:3.40.250.10 112 227 6.7E-28 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS16260 24ea5982742a2f775fb4e7713c46fb6e 332 SMART SM00450 118 219 6.8E-21 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS16260 24ea5982742a2f775fb4e7713c46fb6e 332 Pfam PF00581 Rhodanese-like domain 124 215 3.7E-7 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS13910 94dfeee9e4b2a47eea1ea95f109a6fac 280 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 173 3.4E-13 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CHH28_RS13910 94dfeee9e4b2a47eea1ea95f109a6fac 280 SMART SM00382 25 183 6.0E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS13910 94dfeee9e4b2a47eea1ea95f109a6fac 280 Gene3D G3DSA:3.40.50.300 4 213 1.8E-31 T 29-03-2018 CHH28_RS13910 94dfeee9e4b2a47eea1ea95f109a6fac 280 SUPERFAMILY SSF52540 8 252 1.9E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS14025 090fcd30188483dbc2a9f91b91d63f60 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 16 206 2.8E-101 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CHH28_RS14025 090fcd30188483dbc2a9f91b91d63f60 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 17 207 43.084 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CHH28_RS14025 090fcd30188483dbc2a9f91b91d63f60 208 PRINTS PR00127 Clp protease catalytic subunit P signature 33 48 2.4E-50 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CHH28_RS14025 090fcd30188483dbc2a9f91b91d63f60 208 PRINTS PR00127 Clp protease catalytic subunit P signature 73 93 2.4E-50 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CHH28_RS14025 090fcd30188483dbc2a9f91b91d63f60 208 PRINTS PR00127 Clp protease catalytic subunit P signature 104 121 2.4E-50 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CHH28_RS14025 090fcd30188483dbc2a9f91b91d63f60 208 PRINTS PR00127 Clp protease catalytic subunit P signature 182 201 2.4E-50 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CHH28_RS14025 090fcd30188483dbc2a9f91b91d63f60 208 PRINTS PR00127 Clp protease catalytic subunit P signature 125 144 2.4E-50 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CHH28_RS14025 090fcd30188483dbc2a9f91b91d63f60 208 Gene3D G3DSA:3.90.226.10 16 208 1.1E-44 T 29-03-2018 CHH28_RS14025 090fcd30188483dbc2a9f91b91d63f60 208 SUPERFAMILY SSF52096 25 206 3.91E-73 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS14025 090fcd30188483dbc2a9f91b91d63f60 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 126 139 - T 29-03-2018 IPR033135 ClpP, histidine active site CHH28_RS14025 090fcd30188483dbc2a9f91b91d63f60 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 104 115 - T 29-03-2018 IPR018215 ClpP, Ser active site CHH28_RS14025 090fcd30188483dbc2a9f91b91d63f60 208 Pfam PF00574 Clp protease 27 206 6.3E-88 T 29-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CHH28_RS02720 c8729d013394a3922f856f1f175d2344 255 SUPERFAMILY SSF55729 138 254 3.31E-16 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS02720 c8729d013394a3922f856f1f175d2344 255 Gene3D G3DSA:3.40.630.30 121 254 2.1E-15 T 29-03-2018 CHH28_RS18375 5fa8c9cde239b7f53d5167615b9f16d2 352 Gene3D G3DSA:1.10.10.60 304 348 1.1E-10 T 29-03-2018 CHH28_RS18375 5fa8c9cde239b7f53d5167615b9f16d2 352 Gene3D G3DSA:1.10.10.10 269 303 0.0013 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS18375 5fa8c9cde239b7f53d5167615b9f16d2 352 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 40 208 2.6E-23 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS18375 5fa8c9cde239b7f53d5167615b9f16d2 352 Gene3D G3DSA:1.10.10.10 103 268 5.5E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS18375 5fa8c9cde239b7f53d5167615b9f16d2 352 SMART SM00342 254 336 2.5E-16 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS18375 5fa8c9cde239b7f53d5167615b9f16d2 352 SUPERFAMILY SSF46689 289 344 4.48E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS18375 5fa8c9cde239b7f53d5167615b9f16d2 352 Pfam PF12833 Helix-turn-helix domain 261 337 7.7E-15 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS18375 5fa8c9cde239b7f53d5167615b9f16d2 352 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 290 332 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CHH28_RS00740 9344f0e6d6cbb06d21e58876bf66884d 150 SUPERFAMILY SSF81333 82 142 1.96E-8 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CHH28_RS00740 9344f0e6d6cbb06d21e58876bf66884d 150 SUPERFAMILY SSF81333 3 70 7.45E-5 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CHH28_RS00740 9344f0e6d6cbb06d21e58876bf66884d 150 Pfam PF00137 ATP synthase subunit C 83 142 5.8E-9 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CHH28_RS00740 9344f0e6d6cbb06d21e58876bf66884d 150 Pfam PF00137 ATP synthase subunit C 11 69 1.2E-5 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CHH28_RS00740 9344f0e6d6cbb06d21e58876bf66884d 150 Gene3D G3DSA:1.20.120.610 1 145 3.5E-16 T 29-03-2018 CHH28_RS18995 b7809f6fe68b67e7e9c99ba20b78becd 245 Pfam PF07238 PilZ domain 115 225 5.0E-9 T 29-03-2018 IPR009875 PilZ domain GO:0035438 CHH28_RS18995 b7809f6fe68b67e7e9c99ba20b78becd 245 Pfam PF07317 Flagellar regulator YcgR 8 112 2.8E-13 T 29-03-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CHH28_RS18995 b7809f6fe68b67e7e9c99ba20b78becd 245 Gene3D G3DSA:2.30.110.10 9 112 9.9E-24 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CHH28_RS18995 b7809f6fe68b67e7e9c99ba20b78becd 245 Gene3D G3DSA:2.40.10.220 113 245 1.1E-11 T 29-03-2018 CHH28_RS03780 fad55a8dd7953f4dcd760f2c495a5cf3 436 Pfam PF07219 HemY protein N-terminus 68 174 2.6E-29 T 29-03-2018 IPR010817 HemY, N-terminal CHH28_RS03780 fad55a8dd7953f4dcd760f2c495a5cf3 436 Gene3D G3DSA:1.25.40.10 89 192 0.017 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS03780 fad55a8dd7953f4dcd760f2c495a5cf3 436 Gene3D G3DSA:1.25.40.10 346 389 1.6E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS03780 fad55a8dd7953f4dcd760f2c495a5cf3 436 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 45 431 1.2E-89 T 29-03-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 CHH28_RS03780 fad55a8dd7953f4dcd760f2c495a5cf3 436 SUPERFAMILY SSF48452 364 433 1.05E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS03780 fad55a8dd7953f4dcd760f2c495a5cf3 436 SUPERFAMILY SSF48452 130 219 1.05E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS03780 fad55a8dd7953f4dcd760f2c495a5cf3 436 Gene3D G3DSA:1.25.40.10 390 436 2.2E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS03780 fad55a8dd7953f4dcd760f2c495a5cf3 436 Gene3D G3DSA:1.25.40.10 193 338 6.7E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS03780 fad55a8dd7953f4dcd760f2c495a5cf3 436 Pfam PF14559 Tetratricopeptide repeat 362 414 3.4E-6 T 29-03-2018 CHH28_RS13645 87a7df420be89dc1ab3f4ddbabfe5537 606 Gene3D G3DSA:3.40.50.10490 238 452 8.3E-52 T 29-03-2018 CHH28_RS13645 87a7df420be89dc1ab3f4ddbabfe5537 606 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 606 37.32 T 29-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CHH28_RS13645 87a7df420be89dc1ab3f4ddbabfe5537 606 Pfam PF01380 SIS domain 286 413 1.4E-25 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CHH28_RS13645 87a7df420be89dc1ab3f4ddbabfe5537 606 Pfam PF01380 SIS domain 458 588 2.9E-25 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CHH28_RS13645 87a7df420be89dc1ab3f4ddbabfe5537 606 Gene3D G3DSA:3.60.20.10 2 237 8.6E-59 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS13645 87a7df420be89dc1ab3f4ddbabfe5537 606 Gene3D G3DSA:3.40.50.10490 453 604 1.9E-47 T 29-03-2018 CHH28_RS13645 87a7df420be89dc1ab3f4ddbabfe5537 606 Pfam PF13522 Glutamine amidotransferase domain 63 192 4.5E-21 T 29-03-2018 CHH28_RS13645 87a7df420be89dc1ab3f4ddbabfe5537 606 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 606 6.2E-229 T 29-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CHH28_RS13645 87a7df420be89dc1ab3f4ddbabfe5537 606 SUPERFAMILY SSF56235 2 234 2.66E-66 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS13645 87a7df420be89dc1ab3f4ddbabfe5537 606 SUPERFAMILY SSF53697 245 606 1.95E-95 T 29-03-2018 CHH28_RS08075 ea248d07ee48c76eb51684b05f684b86 139 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CHH28_RS08075 ea248d07ee48c76eb51684b05f684b86 139 Gene3D G3DSA:3.10.180.10 1 123 9.5E-33 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS08075 ea248d07ee48c76eb51684b05f684b86 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 117 5.0E-16 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CHH28_RS08075 ea248d07ee48c76eb51684b05f684b86 139 SUPERFAMILY SSF54593 1 122 3.76E-36 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS07490 87c6321b733b74da35463c17b4ec35dd 154 Gene3D G3DSA:3.10.400.10 7 153 8.3E-54 T 29-03-2018 CHH28_RS07490 87c6321b733b74da35463c17b4ec35dd 154 SMART SM01022 30 153 1.6E-36 T 29-03-2018 IPR007374 ASCH domain CHH28_RS07490 87c6321b733b74da35463c17b4ec35dd 154 SUPERFAMILY SSF88697 2 154 2.73E-48 T 29-03-2018 IPR015947 PUA-like domain CHH28_RS07490 87c6321b733b74da35463c17b4ec35dd 154 PIRSF PIRSF021320 1 154 5.0E-47 T 29-03-2018 IPR009326 Protein of unknown function DUF984 CHH28_RS07490 87c6321b733b74da35463c17b4ec35dd 154 Pfam PF04266 ASCH domain 40 153 6.1E-23 T 29-03-2018 IPR007374 ASCH domain CHH28_RS01470 7f4df55db76613215f1f9a997871ebd4 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 4.1E-5 T 29-03-2018 CHH28_RS01470 7f4df55db76613215f1f9a997871ebd4 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 4.1E-5 T 29-03-2018 CHH28_RS01470 7f4df55db76613215f1f9a997871ebd4 487 Gene3D G3DSA:3.50.50.60 162 487 4.8E-59 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS01470 7f4df55db76613215f1f9a997871ebd4 487 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 2.0E-5 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CHH28_RS01470 7f4df55db76613215f1f9a997871ebd4 487 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 168 192 2.0E-5 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CHH28_RS01470 7f4df55db76613215f1f9a997871ebd4 487 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 5 218 1.9E-15 T 29-03-2018 CHH28_RS01470 7f4df55db76613215f1f9a997871ebd4 487 SUPERFAMILY SSF51905 293 411 4.4E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS01470 7f4df55db76613215f1f9a997871ebd4 487 SUPERFAMILY SSF51905 2 226 4.4E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS01470 7f4df55db76613215f1f9a997871ebd4 487 Gene3D G3DSA:3.50.50.60 1 161 1.8E-26 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS09455 672df212e679f7855eab5aafe0865fca 443 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 158 373 6.2E-48 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CHH28_RS09455 672df212e679f7855eab5aafe0865fca 443 Gene3D G3DSA:3.10.350.10 391 443 3.0E-16 T 29-03-2018 CHH28_RS09455 672df212e679f7855eab5aafe0865fca 443 Pfam PF11741 AMIN domain 30 130 8.2E-18 T 29-03-2018 IPR021731 AMIN domain CHH28_RS09455 672df212e679f7855eab5aafe0865fca 443 SMART SM00646 218 373 7.8E-59 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CHH28_RS09455 672df212e679f7855eab5aafe0865fca 443 SUPERFAMILY SSF53187 300 377 3.14E-54 T 29-03-2018 CHH28_RS09455 672df212e679f7855eab5aafe0865fca 443 SUPERFAMILY SSF53187 156 252 3.14E-54 T 29-03-2018 CHH28_RS09455 672df212e679f7855eab5aafe0865fca 443 SUPERFAMILY SSF54106 397 441 9.16E-12 T 29-03-2018 IPR018392 LysM domain CHH28_RS09455 672df212e679f7855eab5aafe0865fca 443 SMART SM00257 398 441 6.1E-17 T 29-03-2018 IPR018392 LysM domain CHH28_RS09455 672df212e679f7855eab5aafe0865fca 443 Pfam PF01476 LysM domain 399 441 1.2E-15 T 29-03-2018 IPR018392 LysM domain CHH28_RS09455 672df212e679f7855eab5aafe0865fca 443 Gene3D G3DSA:3.40.630.40 153 381 1.7E-57 T 29-03-2018 CHH28_RS02065 a49e3220ca538530f3d334f7f1885b5c 475 PIRSF PIRSF006060 1 461 9.9E-67 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CHH28_RS02065 a49e3220ca538530f3d334f7f1885b5c 475 TIGRFAM TIGR00908 2A0305: ethanolamine permease 11 449 4.8E-148 T 29-03-2018 IPR004757 Ethanolamine permease CHH28_RS02065 a49e3220ca538530f3d334f7f1885b5c 475 Pfam PF13520 Amino acid permease 29 424 2.1E-37 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CHH28_RS05170 bf7cf9eb168a1a7a653a1253f6851a64 305 Gene3D G3DSA:3.40.190.10 88 174 7.0E-16 T 29-03-2018 CHH28_RS05170 bf7cf9eb168a1a7a653a1253f6851a64 305 SUPERFAMILY SSF53850 90 297 7.96E-46 T 29-03-2018 CHH28_RS05170 bf7cf9eb168a1a7a653a1253f6851a64 305 Gene3D G3DSA:3.40.190.10 175 261 6.1E-17 T 29-03-2018 CHH28_RS05170 bf7cf9eb168a1a7a653a1253f6851a64 305 SUPERFAMILY SSF46785 3 112 2.61E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS05170 bf7cf9eb168a1a7a653a1253f6851a64 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.7E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS05170 bf7cf9eb168a1a7a653a1253f6851a64 305 Gene3D G3DSA:1.10.10.10 3 84 7.8E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS05170 bf7cf9eb168a1a7a653a1253f6851a64 305 Pfam PF03466 LysR substrate binding domain 88 290 6.6E-42 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS13560 66a963029600c0723f42421ae1030026 220 Gene3D G3DSA:1.10.530.10 30 193 5.0E-20 T 29-03-2018 CHH28_RS13560 66a963029600c0723f42421ae1030026 220 SUPERFAMILY SSF53955 6 176 1.55E-20 T 29-03-2018 IPR023346 Lysozyme-like domain CHH28_RS16385 b86868c3f23f2b39e39e67711b01afeb 342 Gene3D G3DSA:3.40.50.1170 1 203 4.0E-73 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CHH28_RS16385 b86868c3f23f2b39e39e67711b01afeb 342 SUPERFAMILY SSF53774 2 341 6.93E-96 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CHH28_RS16385 b86868c3f23f2b39e39e67711b01afeb 342 PRINTS PR00139 Asparaginase/glutaminase family signature 81 99 1.3E-14 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CHH28_RS16385 b86868c3f23f2b39e39e67711b01afeb 342 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 1.3E-14 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CHH28_RS16385 b86868c3f23f2b39e39e67711b01afeb 342 PRINTS PR00139 Asparaginase/glutaminase family signature 266 284 1.3E-14 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CHH28_RS16385 b86868c3f23f2b39e39e67711b01afeb 342 SMART SM00870 5 329 4.4E-110 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CHH28_RS16385 b86868c3f23f2b39e39e67711b01afeb 342 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 5 341 1.6E-80 T 29-03-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 CHH28_RS16385 b86868c3f23f2b39e39e67711b01afeb 342 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 82 92 - T 29-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CHH28_RS16385 b86868c3f23f2b39e39e67711b01afeb 342 PIRSF PIRSF500176 2 338 1.1E-94 T 29-03-2018 CHH28_RS16385 b86868c3f23f2b39e39e67711b01afeb 342 Pfam PF00710 Asparaginase, N-terminal 5 191 4.4E-60 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CHH28_RS16385 b86868c3f23f2b39e39e67711b01afeb 342 Gene3D G3DSA:3.40.50.40 215 342 2.7E-36 T 29-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 CHH28_RS16385 b86868c3f23f2b39e39e67711b01afeb 342 PIRSF PIRSF001220 1 340 2.9E-83 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CHH28_RS07590 ee7e7d24f999881b539f62e1332b0e79 222 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS07590 ee7e7d24f999881b539f62e1332b0e79 222 Gene3D G3DSA:3.40.50.300 1 222 4.7E-59 T 29-03-2018 CHH28_RS07590 ee7e7d24f999881b539f62e1332b0e79 222 SUPERFAMILY SSF52540 1 218 1.77E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS07590 ee7e7d24f999881b539f62e1332b0e79 222 Pfam PF00005 ABC transporter 21 166 5.6E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS07590 ee7e7d24f999881b539f62e1332b0e79 222 SMART SM00382 30 215 2.4E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS15145 c30197fe41759e72be732cd333141b15 319 PIRSF PIRSF005355 8 314 6.8E-70 T 29-03-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 CHH28_RS15145 c30197fe41759e72be732cd333141b15 319 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 15 313 17.985 T 29-03-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CHH28_RS15145 c30197fe41759e72be732cd333141b15 319 Pfam PF01040 UbiA prenyltransferase family 46 287 3.1E-30 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CHH28_RS15145 c30197fe41759e72be732cd333141b15 319 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 24 308 3.9E-46 T 29-03-2018 CHH28_RS07260 4aeb40e1774fad9807d72898f7f8cef3 173 SUPERFAMILY SSF55729 16 135 4.05E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS07260 4aeb40e1774fad9807d72898f7f8cef3 173 Pfam PF13527 Acetyltransferase (GNAT) domain 15 123 2.1E-14 T 29-03-2018 CHH28_RS07260 4aeb40e1774fad9807d72898f7f8cef3 173 Gene3D G3DSA:3.40.630.30 10 158 1.8E-16 T 29-03-2018 CHH28_RS04485 c79b4e92e2c3318719992e852a2cb7ed 546 Gene3D G3DSA:3.40.50.2300 3 136 1.4E-22 T 29-03-2018 CHH28_RS04485 c79b4e92e2c3318719992e852a2cb7ed 546 Gene3D G3DSA:1.25.40.10 271 447 2.7E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS04485 c79b4e92e2c3318719992e852a2cb7ed 546 Gene3D G3DSA:1.25.40.10 187 270 3.7E-15 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS04485 c79b4e92e2c3318719992e852a2cb7ed 546 SUPERFAMILY SSF48452 173 305 4.43E-19 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS04485 c79b4e92e2c3318719992e852a2cb7ed 546 SUPERFAMILY SSF48452 433 478 4.43E-19 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS04485 c79b4e92e2c3318719992e852a2cb7ed 546 SMART SM00448 11 127 4.0E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS04485 c79b4e92e2c3318719992e852a2cb7ed 546 Pfam PF00072 Response regulator receiver domain 13 127 7.9E-17 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS04485 c79b4e92e2c3318719992e852a2cb7ed 546 Gene3D G3DSA:1.25.40.10 137 186 2.2E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS04485 c79b4e92e2c3318719992e852a2cb7ed 546 Pfam PF13432 Tetratricopeptide repeat 215 268 0.0035 T 29-03-2018 CHH28_RS04485 c79b4e92e2c3318719992e852a2cb7ed 546 SUPERFAMILY SSF52172 10 148 1.42E-25 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS04485 c79b4e92e2c3318719992e852a2cb7ed 546 Gene3D G3DSA:1.20.58.280 448 537 0.0092 T 29-03-2018 CHH28_RS03610 d869347b3fb4208da8a2a8e8391eb6cb 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 5.3E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS03610 d869347b3fb4208da8a2a8e8391eb6cb 296 Gene3D G3DSA:3.40.190.10 89 177 1.2E-16 T 29-03-2018 CHH28_RS03610 d869347b3fb4208da8a2a8e8391eb6cb 296 SUPERFAMILY SSF46785 3 111 7.62E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS03610 d869347b3fb4208da8a2a8e8391eb6cb 296 Gene3D G3DSA:1.10.10.10 3 83 6.8E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS03610 d869347b3fb4208da8a2a8e8391eb6cb 296 Pfam PF03466 LysR substrate binding domain 88 286 5.3E-41 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS03610 d869347b3fb4208da8a2a8e8391eb6cb 296 Gene3D G3DSA:3.40.190.10 178 260 3.6E-24 T 29-03-2018 CHH28_RS03610 d869347b3fb4208da8a2a8e8391eb6cb 296 SUPERFAMILY SSF53850 89 291 7.45E-44 T 29-03-2018 CHH28_RS00260 e5a78beeb92e9cbea748e1c16e0fb180 405 Gene3D G3DSA:3.60.70.12 9 276 7.5E-98 T 29-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CHH28_RS00260 e5a78beeb92e9cbea748e1c16e0fb180 405 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 22 405 3.0E-131 T 29-03-2018 CHH28_RS00260 e5a78beeb92e9cbea748e1c16e0fb180 405 Pfam PF01960 ArgJ family 22 405 3.6E-138 T 29-03-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CHH28_RS00260 e5a78beeb92e9cbea748e1c16e0fb180 405 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 15 405 2.8E-116 T 29-03-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CHH28_RS00260 e5a78beeb92e9cbea748e1c16e0fb180 405 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 405 143.786 T 29-03-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CHH28_RS00260 e5a78beeb92e9cbea748e1c16e0fb180 405 SUPERFAMILY SSF56266 14 402 1.11E-133 T 29-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CHH28_RS13400 444d1f22de51e3b1d9609a6aaf70ccfa 612 Gene3D G3DSA:3.40.50.410 75 262 2.9E-12 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS13400 444d1f22de51e3b1d9609a6aaf70ccfa 612 SUPERFAMILY SSF53300 91 225 3.02E-15 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS13400 444d1f22de51e3b1d9609a6aaf70ccfa 612 SMART SM00327 87 259 3.6E-4 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS13400 444d1f22de51e3b1d9609a6aaf70ccfa 612 Pfam PF13519 von Willebrand factor type A domain 91 198 7.3E-14 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS13400 444d1f22de51e3b1d9609a6aaf70ccfa 612 Gene3D G3DSA:1.25.40.10 387 414 4.8E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS13400 444d1f22de51e3b1d9609a6aaf70ccfa 612 Pfam PF00515 Tetratricopeptide repeat 398 428 1.4E-9 T 29-03-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 CHH28_RS13400 444d1f22de51e3b1d9609a6aaf70ccfa 612 SUPERFAMILY SSF48452 350 451 2.85E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS13400 444d1f22de51e3b1d9609a6aaf70ccfa 612 Gene3D G3DSA:1.25.40.10 371 386 0.099 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS13400 444d1f22de51e3b1d9609a6aaf70ccfa 612 SMART SM00028 396 429 1.2E-7 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS13400 444d1f22de51e3b1d9609a6aaf70ccfa 612 Gene3D G3DSA:1.10.287.1110 415 436 4.0E-5 T 29-03-2018 CHH28_RS19265 afae8d0f8f5d4c52f231d8961aa3e2ff 374 Gene3D G3DSA:1.20.120.330 15 116 3.1E-6 T 29-03-2018 CHH28_RS19265 afae8d0f8f5d4c52f231d8961aa3e2ff 374 Gene3D G3DSA:2.70.70.10 239 373 1.5E-29 T 29-03-2018 CHH28_RS19265 afae8d0f8f5d4c52f231d8961aa3e2ff 374 Gene3D G3DSA:3.90.20.10 120 238 0.012 T 29-03-2018 CHH28_RS19265 afae8d0f8f5d4c52f231d8961aa3e2ff 374 Pfam PF01551 Peptidase family M23 274 367 9.4E-22 T 29-03-2018 IPR016047 Peptidase M23 CHH28_RS19265 afae8d0f8f5d4c52f231d8961aa3e2ff 374 SUPERFAMILY SSF51261 143 371 5.23E-38 T 29-03-2018 IPR011055 Duplicated hybrid motif CHH28_RS08400 57e22094c297af68989966d17be65848 1024 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 4.6E-17 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS08400 57e22094c297af68989966d17be65848 1024 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 4.6E-17 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS08400 57e22094c297af68989966d17be65848 1024 PRINTS PR00702 Acriflavin resistance protein family signature 351 372 4.6E-17 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS08400 57e22094c297af68989966d17be65848 1024 PRINTS PR00702 Acriflavin resistance protein family signature 379 403 4.6E-17 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS08400 57e22094c297af68989966d17be65848 1024 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 4.6E-17 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS08400 57e22094c297af68989966d17be65848 1024 SUPERFAMILY SSF82866 794 1023 5.75E-45 T 29-03-2018 CHH28_RS08400 57e22094c297af68989966d17be65848 1024 SUPERFAMILY SSF82693 560 664 7.32E-7 T 29-03-2018 CHH28_RS08400 57e22094c297af68989966d17be65848 1024 SUPERFAMILY SSF82714 177 259 2.22E-13 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS08400 57e22094c297af68989966d17be65848 1024 SUPERFAMILY SSF82714 720 797 1.1E-7 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS08400 57e22094c297af68989966d17be65848 1024 Gene3D G3DSA:1.20.1640.10 797 1022 3.2E-39 T 29-03-2018 CHH28_RS08400 57e22094c297af68989966d17be65848 1024 Pfam PF00873 AcrB/AcrD/AcrF family 1 1019 8.4E-168 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS08400 57e22094c297af68989966d17be65848 1024 SUPERFAMILY SSF82866 285 484 1.57E-33 T 29-03-2018 CHH28_RS08400 57e22094c297af68989966d17be65848 1024 Gene3D G3DSA:3.30.2090.10 175 262 5.8E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS08400 57e22094c297af68989966d17be65848 1024 Gene3D G3DSA:3.30.70.1430 38 138 3.7E-14 T 29-03-2018 CHH28_RS08400 57e22094c297af68989966d17be65848 1024 SUPERFAMILY SSF82693 132 176 9.94E-13 T 29-03-2018 CHH28_RS08400 57e22094c297af68989966d17be65848 1024 SUPERFAMILY SSF82693 263 319 9.94E-13 T 29-03-2018 CHH28_RS08400 57e22094c297af68989966d17be65848 1024 SUPERFAMILY SSF82693 42 128 7.32E-13 T 29-03-2018 CHH28_RS08400 57e22094c297af68989966d17be65848 1024 Gene3D G3DSA:3.30.70.1430 560 665 2.2E-11 T 29-03-2018 CHH28_RS08400 57e22094c297af68989966d17be65848 1024 Gene3D G3DSA:1.20.1640.10 275 498 4.6E-35 T 29-03-2018 CHH28_RS08400 57e22094c297af68989966d17be65848 1024 Gene3D G3DSA:3.30.2090.10 712 796 4.1E-9 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS18000 af9445024da253cf6dcbb2ab94329cfe 162 SMART SM00347 43 146 6.0E-24 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS18000 af9445024da253cf6dcbb2ab94329cfe 162 ProSitePatterns PS01117 MarR-type HTH domain signature. 85 119 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CHH28_RS18000 af9445024da253cf6dcbb2ab94329cfe 162 SUPERFAMILY SSF46785 10 161 2.12E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS18000 af9445024da253cf6dcbb2ab94329cfe 162 Gene3D G3DSA:1.10.10.10 1 162 2.0E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS18000 af9445024da253cf6dcbb2ab94329cfe 162 Pfam PF12802 MarR family 48 110 1.9E-12 T 29-03-2018 CHH28_RS18000 af9445024da253cf6dcbb2ab94329cfe 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 86 3.3E-9 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS18000 af9445024da253cf6dcbb2ab94329cfe 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 136 156 3.3E-9 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS18000 af9445024da253cf6dcbb2ab94329cfe 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 102 3.3E-9 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS18000 af9445024da253cf6dcbb2ab94329cfe 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 122 3.3E-9 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS14835 c0dd48bf5cd4a15f6cff2d4fabaf74da 375 Gene3D G3DSA:3.40.640.10 28 267 7.9E-46 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS14835 c0dd48bf5cd4a15f6cff2d4fabaf74da 375 SUPERFAMILY SSF53383 4 374 2.72E-77 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS14835 c0dd48bf5cd4a15f6cff2d4fabaf74da 375 Gene3D G3DSA:3.90.1150.10 268 374 9.9E-8 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS14835 c0dd48bf5cd4a15f6cff2d4fabaf74da 375 Pfam PF00266 Aminotransferase class-V 18 343 9.4E-56 T 29-03-2018 IPR000192 Aminotransferase class V domain CHH28_RS17160 95c660fd3f73d1e898f22c6c62d5bf2a 180 Pfam PF03449 Transcription elongation factor, N-terminal 12 81 2.7E-22 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CHH28_RS17160 95c660fd3f73d1e898f22c6c62d5bf2a 180 SUPERFAMILY SSF46557 11 84 2.62E-24 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CHH28_RS17160 95c660fd3f73d1e898f22c6c62d5bf2a 180 SUPERFAMILY SSF54534 87 162 7.32E-21 T 29-03-2018 CHH28_RS17160 95c660fd3f73d1e898f22c6c62d5bf2a 180 Gene3D G3DSA:3.10.50.30 83 163 3.3E-22 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CHH28_RS17160 95c660fd3f73d1e898f22c6c62d5bf2a 180 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 11 162 2.3E-63 T 29-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CHH28_RS17160 95c660fd3f73d1e898f22c6c62d5bf2a 180 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 24 55 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CHH28_RS17160 95c660fd3f73d1e898f22c6c62d5bf2a 180 Gene3D G3DSA:1.10.287.180 10 82 1.4E-24 T 29-03-2018 CHH28_RS17160 95c660fd3f73d1e898f22c6c62d5bf2a 180 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 89 161 6.3E-23 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CHH28_RS17160 95c660fd3f73d1e898f22c6c62d5bf2a 180 Hamap MF_00105 Transcription elongation factor GreA [greA]. 9 161 26.19 T 29-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CHH28_RS17160 95c660fd3f73d1e898f22c6c62d5bf2a 180 Hamap MF_00930 Transcription elongation factor GreB [greB]. 8 163 48.621 T 29-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CHH28_RS17160 95c660fd3f73d1e898f22c6c62d5bf2a 180 PIRSF PIRSF006092 7 163 1.1E-43 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CHH28_RS16985 3a90944b044126d901f16bd37b7c32dd 347 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 12 344 44.842 T 29-03-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CHH28_RS16985 3a90944b044126d901f16bd37b7c32dd 347 SUPERFAMILY SSF51445 15 308 3.16E-82 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CHH28_RS16985 3a90944b044126d901f16bd37b7c32dd 347 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 26 308 7.0E-76 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CHH28_RS16985 3a90944b044126d901f16bd37b7c32dd 347 Gene3D G3DSA:3.20.20.300 11 334 3.4E-73 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CHH28_RS16985 3a90944b044126d901f16bd37b7c32dd 347 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 245 262 - T 29-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CHH28_RS04800 e67f44aa854a3d80aa291f661ab659ab 273 Gene3D G3DSA:3.40.50.1980 23 150 3.1E-18 T 29-03-2018 CHH28_RS04800 e67f44aa854a3d80aa291f661ab659ab 273 SUPERFAMILY SSF53807 19 266 3.97E-50 T 29-03-2018 CHH28_RS04800 e67f44aa854a3d80aa291f661ab659ab 273 Gene3D G3DSA:3.40.50.1980 151 267 6.5E-19 T 29-03-2018 CHH28_RS04800 e67f44aa854a3d80aa291f661ab659ab 273 Pfam PF01297 Zinc-uptake complex component A periplasmic 25 258 2.5E-33 T 29-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CHH28_RS01645 05e55dba69e2a95164a3844297914980 628 Gene3D G3DSA:2.60.40.10 183 291 2.1E-9 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS01645 05e55dba69e2a95164a3844297914980 628 SUPERFAMILY SSF49373 209 279 8.63E-9 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CHH28_RS01645 05e55dba69e2a95164a3844297914980 628 Gene3D G3DSA:2.60.40.10 295 414 7.0E-7 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS08895 54090c08f41623302c0599c5402318a2 227 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 3.3E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS08895 54090c08f41623302c0599c5402318a2 227 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 3.3E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS08895 54090c08f41623302c0599c5402318a2 227 Gene3D G3DSA:3.40.50.720 1 227 5.3E-49 T 29-03-2018 CHH28_RS08895 54090c08f41623302c0599c5402318a2 227 Pfam PF00106 short chain dehydrogenase 3 189 2.5E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS08895 54090c08f41623302c0599c5402318a2 227 SUPERFAMILY SSF51735 1 227 4.2E-68 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS08895 54090c08f41623302c0599c5402318a2 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 2.3E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS08895 54090c08f41623302c0599c5402318a2 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 2.3E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS08895 54090c08f41623302c0599c5402318a2 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.3E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS08895 54090c08f41623302c0599c5402318a2 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.3E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS08895 54090c08f41623302c0599c5402318a2 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 2.3E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS18745 417ade0ac7621cfe2be490fe315f1f5c 324 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 317 1.2E-103 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CHH28_RS18745 417ade0ac7621cfe2be490fe315f1f5c 324 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 249 317 4.8E-17 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CHH28_RS18745 417ade0ac7621cfe2be490fe315f1f5c 324 PRINTS PR00955 Flagellar motor switch protein FliM signature 209 227 3.0E-20 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CHH28_RS18745 417ade0ac7621cfe2be490fe315f1f5c 324 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 3.0E-20 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CHH28_RS18745 417ade0ac7621cfe2be490fe315f1f5c 324 PRINTS PR00955 Flagellar motor switch protein FliM signature 87 103 3.0E-20 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CHH28_RS18745 417ade0ac7621cfe2be490fe315f1f5c 324 PRINTS PR00955 Flagellar motor switch protein FliM signature 112 131 3.0E-20 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CHH28_RS18745 417ade0ac7621cfe2be490fe315f1f5c 324 SUPERFAMILY SSF101801 246 320 3.01E-15 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CHH28_RS18745 417ade0ac7621cfe2be490fe315f1f5c 324 SUPERFAMILY SSF103039 53 228 9.81E-21 T 29-03-2018 IPR028976 CheC-like domain CHH28_RS18745 417ade0ac7621cfe2be490fe315f1f5c 324 SUPERFAMILY SSF103039 4 13 9.81E-21 T 29-03-2018 IPR028976 CheC-like domain CHH28_RS18745 417ade0ac7621cfe2be490fe315f1f5c 324 Gene3D G3DSA:2.30.330.10 235 324 4.0E-15 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CHH28_RS18745 417ade0ac7621cfe2be490fe315f1f5c 324 PIRSF PIRSF002888 1 324 5.7E-92 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CHH28_RS18745 417ade0ac7621cfe2be490fe315f1f5c 324 Gene3D G3DSA:3.40.1550.10 44 232 1.4E-41 T 29-03-2018 IPR028976 CheC-like domain CHH28_RS18745 417ade0ac7621cfe2be490fe315f1f5c 324 Pfam PF02154 Flagellar motor switch protein FliM 36 227 1.4E-71 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CHH28_RS04395 58a4e901365422bc3bc274a1d70072b8 44 Pfam PF00468 Ribosomal protein L34 1 44 1.5E-25 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS04395 58a4e901365422bc3bc274a1d70072b8 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.142 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS04395 58a4e901365422bc3bc274a1d70072b8 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 5.8E-27 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS04395 58a4e901365422bc3bc274a1d70072b8 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 29-03-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS04395 58a4e901365422bc3bc274a1d70072b8 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 3.0E-14 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS01600 b9e0beaccd86f8178b080fe594df3c19 423 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 2 419 5.9E-203 T 29-03-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 CHH28_RS01600 b9e0beaccd86f8178b080fe594df3c19 423 SUPERFAMILY SSF53383 1 419 1.14E-130 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS01600 b9e0beaccd86f8178b080fe594df3c19 423 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CHH28_RS01600 b9e0beaccd86f8178b080fe594df3c19 423 PIRSF PIRSF001434 1 423 3.7E-133 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CHH28_RS01600 b9e0beaccd86f8178b080fe594df3c19 423 Gene3D G3DSA:3.40.640.10 1 286 1.3E-64 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS01600 b9e0beaccd86f8178b080fe594df3c19 423 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 419 1.4E-145 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CHH28_RS01600 b9e0beaccd86f8178b080fe594df3c19 423 Gene3D G3DSA:3.90.1150.10 288 423 1.4E-49 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS00675 8e66018d7ec8e556b54031059dc87227 291 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 2 291 1.7E-99 T 29-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CHH28_RS00675 8e66018d7ec8e556b54031059dc87227 291 Pfam PF04958 Arginine N-succinyltransferase beta subunit 2 289 3.9E-105 T 29-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CHH28_RS00675 8e66018d7ec8e556b54031059dc87227 291 Gene3D G3DSA:3.40.630.30 2 227 4.8E-11 T 29-03-2018 CHH28_RS00675 8e66018d7ec8e556b54031059dc87227 291 SUPERFAMILY SSF55729 2 291 3.47E-96 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS00675 8e66018d7ec8e556b54031059dc87227 291 Gene3D G3DSA:2.40.40.20 228 291 3.6E-10 T 29-03-2018 CHH28_RS13305 397dd95ea3fd3ec0d44f0904ae94d565 188 PIRSF PIRSF000232 1 186 3.5E-60 T 29-03-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like CHH28_RS13305 397dd95ea3fd3ec0d44f0904ae94d565 188 Pfam PF00881 Nitroreductase family 8 162 1.0E-24 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CHH28_RS13305 397dd95ea3fd3ec0d44f0904ae94d565 188 SUPERFAMILY SSF55469 1 182 7.46E-36 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CHH28_RS13305 397dd95ea3fd3ec0d44f0904ae94d565 188 Gene3D G3DSA:3.40.109.10 1 183 5.7E-27 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CHH28_RS08095 ae7755f535d44ddcad985805d2c8cc25 280 Pfam PF04321 RmlD substrate binding domain 72 269 1.4E-18 T 29-03-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 CHH28_RS08095 ae7755f535d44ddcad985805d2c8cc25 280 Gene3D G3DSA:3.40.50.720 30 275 4.2E-9 T 29-03-2018 CHH28_RS08095 ae7755f535d44ddcad985805d2c8cc25 280 SUPERFAMILY SSF51735 8 270 1.01E-20 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS18305 47ede9b026b4955fbbc95d342ed4f483 276 Pfam PF16733 Rhomboid N-terminal domain 1 67 1.3E-16 T 29-03-2018 IPR031976 Rhomboid protease, N-terminal CHH28_RS18305 47ede9b026b4955fbbc95d342ed4f483 276 Gene3D G3DSA:1.20.1540.10 74 270 8.5E-24 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CHH28_RS18305 47ede9b026b4955fbbc95d342ed4f483 276 SUPERFAMILY SSF144091 84 272 4.71E-28 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CHH28_RS18305 47ede9b026b4955fbbc95d342ed4f483 276 Pfam PF01694 Rhomboid family 133 269 3.3E-22 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CHH28_RS06145 feb427ebd655099f75ec3dcce91778c1 136 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.812 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06145 feb427ebd655099f75ec3dcce91778c1 136 SUPERFAMILY SSF64263 1 119 8.37E-51 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06145 feb427ebd655099f75ec3dcce91778c1 136 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 2.1E-47 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06145 feb427ebd655099f75ec3dcce91778c1 136 Gene3D G3DSA:3.90.1030.10 1 117 1.3E-48 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06145 feb427ebd655099f75ec3dcce91778c1 136 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06145 feb427ebd655099f75ec3dcce91778c1 136 Pfam PF01196 Ribosomal protein L17 20 116 5.1E-34 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS19345 92f2143224cadc6e4feb688c223b8b02 324 Pfam PF01032 FecCD transport family 17 317 1.1E-85 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CHH28_RS19345 92f2143224cadc6e4feb688c223b8b02 324 Gene3D G3DSA:1.10.3470.10 3 323 1.7E-63 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CHH28_RS19345 92f2143224cadc6e4feb688c223b8b02 324 SUPERFAMILY SSF81345 9 317 1.44E-77 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CHH28_RS05425 fda091e2176f4ee5c3b74a3b4364ee3b 288 Pfam PF01564 Spermine/spermidine synthase domain 65 245 3.7E-50 T 29-03-2018 CHH28_RS05425 fda091e2176f4ee5c3b74a3b4364ee3b 288 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 85 98 - T 29-03-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CHH28_RS05425 fda091e2176f4ee5c3b74a3b4364ee3b 288 Gene3D G3DSA:3.40.50.150 62 288 2.4E-34 T 29-03-2018 CHH28_RS05425 fda091e2176f4ee5c3b74a3b4364ee3b 288 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 8 286 35.325 T 29-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CHH28_RS05425 fda091e2176f4ee5c3b74a3b4364ee3b 288 SUPERFAMILY SSF53335 15 285 1.09E-70 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS05425 fda091e2176f4ee5c3b74a3b4364ee3b 288 Pfam PF17284 Spermidine synthase tetramerisation domain 8 56 1.2E-11 T 29-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CHH28_RS05425 fda091e2176f4ee5c3b74a3b4364ee3b 288 TIGRFAM TIGR00417 speE: spermidine synthase 9 280 3.0E-81 T 29-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CHH28_RS05425 fda091e2176f4ee5c3b74a3b4364ee3b 288 Gene3D G3DSA:2.30.140.10 2 58 7.1E-18 T 29-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CHH28_RS05965 be951b7a842d7ed9cbed78f668dcfde3 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 29-03-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS05965 be951b7a842d7ed9cbed78f668dcfde3 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 9.4E-102 T 29-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CHH28_RS05965 be951b7a842d7ed9cbed78f668dcfde3 231 SUPERFAMILY SSF56808 6 225 1.31E-80 T 29-03-2018 IPR023674 Ribosomal protein L1-like CHH28_RS05965 be951b7a842d7ed9cbed78f668dcfde3 231 Pfam PF00687 Ribosomal protein L1p/L10e family 34 220 5.8E-47 T 29-03-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CHH28_RS05965 be951b7a842d7ed9cbed78f668dcfde3 231 PIRSF PIRSF002155 1 227 1.2E-76 T 29-03-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS05965 be951b7a842d7ed9cbed78f668dcfde3 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 41.949 T 29-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CHH28_RS05965 be951b7a842d7ed9cbed78f668dcfde3 231 Gene3D G3DSA:3.30.190.20 150 228 7.1E-21 T 29-03-2018 CHH28_RS05965 be951b7a842d7ed9cbed78f668dcfde3 231 Gene3D G3DSA:3.40.50.790 68 149 6.5E-34 T 29-03-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CHH28_RS02790 ba4e6f861f94f48381693dfe9afa4609 220 SUPERFAMILY SSF46689 2 74 1.28E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS02790 ba4e6f861f94f48381693dfe9afa4609 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 4.1E-13 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS02790 ba4e6f861f94f48381693dfe9afa4609 220 Pfam PF13972 Bacterial transcriptional repressor 56 201 4.1E-46 T 29-03-2018 IPR025722 Bacterial transcriptional repressor TetR CHH28_RS02790 ba4e6f861f94f48381693dfe9afa4609 220 Gene3D G3DSA:1.10.357.10 2 215 2.1E-34 T 29-03-2018 CHH28_RS02790 ba4e6f861f94f48381693dfe9afa4609 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 7.4E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS02790 ba4e6f861f94f48381693dfe9afa4609 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 7.4E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS19190 26e24fd683e3555a8acf117f84b73671 244 Gene3D G3DSA:3.40.190.10 129 244 4.6E-6 T 29-03-2018 CHH28_RS19190 26e24fd683e3555a8acf117f84b73671 244 SUPERFAMILY SSF53850 19 239 1.18E-30 T 29-03-2018 CHH28_RS19190 26e24fd683e3555a8acf117f84b73671 244 Gene3D G3DSA:3.40.190.10 13 128 2.5E-12 T 29-03-2018 CHH28_RS19190 26e24fd683e3555a8acf117f84b73671 244 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 240 2.0E-13 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS11645 aa9e6d6e7c0dad651fe4b5e1a2dda6cf 433 Gene3D G3DSA:1.25.40.10 138 208 2.0E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS11645 aa9e6d6e7c0dad651fe4b5e1a2dda6cf 433 Pfam PF13432 Tetratricopeptide repeat 59 119 5.4E-6 T 29-03-2018 CHH28_RS11645 aa9e6d6e7c0dad651fe4b5e1a2dda6cf 433 SUPERFAMILY SSF48452 307 368 1.26E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS11645 aa9e6d6e7c0dad651fe4b5e1a2dda6cf 433 SUPERFAMILY SSF48452 90 197 1.26E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS11645 aa9e6d6e7c0dad651fe4b5e1a2dda6cf 433 Gene3D G3DSA:1.25.40.10 209 433 8.7E-17 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS11645 aa9e6d6e7c0dad651fe4b5e1a2dda6cf 433 Gene3D G3DSA:1.25.40.10 49 137 4.3E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS11645 aa9e6d6e7c0dad651fe4b5e1a2dda6cf 433 Pfam PF13181 Tetratricopeptide repeat 164 190 0.042 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS11645 aa9e6d6e7c0dad651fe4b5e1a2dda6cf 433 SMART SM00028 340 373 390.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS11645 aa9e6d6e7c0dad651fe4b5e1a2dda6cf 433 SMART SM00028 91 124 0.37 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS11645 aa9e6d6e7c0dad651fe4b5e1a2dda6cf 433 SMART SM00028 164 197 1.9 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS14570 e7429f1b2a04538fffe157e831dbf9a1 647 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 158 2.0E-44 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CHH28_RS14570 e7429f1b2a04538fffe157e831dbf9a1 647 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 9 158 1.4E-43 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CHH28_RS14570 e7429f1b2a04538fffe157e831dbf9a1 647 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 175 646 1.1E-197 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CHH28_RS14570 e7429f1b2a04538fffe157e831dbf9a1 647 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 225 646 1.4E-183 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CHH28_RS11575 e5f53b0602569bb804d140c1bd7409bd 350 Hamap MF_01962 Adenine deaminase. 22 334 81.156 T 29-03-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CHH28_RS11575 e5f53b0602569bb804d140c1bd7409bd 350 Pfam PF00962 Adenosine/AMP deaminase 26 338 3.4E-74 T 29-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 CHH28_RS11575 e5f53b0602569bb804d140c1bd7409bd 350 SUPERFAMILY SSF51556 19 345 2.15E-85 T 29-03-2018 IPR032466 Metal-dependent hydrolase CHH28_RS11575 e5f53b0602569bb804d140c1bd7409bd 350 Gene3D G3DSA:3.20.20.140 14 350 4.1E-82 T 29-03-2018 CHH28_RS11575 e5f53b0602569bb804d140c1bd7409bd 350 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 26 338 9.9E-112 T 29-03-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 CHH28_RS03725 c2e5725923faa1c35dc111fd4ccb8aa0 237 SMART SM00866 89 226 1.5E-29 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CHH28_RS03725 c2e5725923faa1c35dc111fd4ccb8aa0 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 3.1E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS03725 c2e5725923faa1c35dc111fd4ccb8aa0 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 3.1E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS03725 c2e5725923faa1c35dc111fd4ccb8aa0 237 Gene3D G3DSA:3.40.1410.10 69 232 1.3E-39 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CHH28_RS03725 c2e5725923faa1c35dc111fd4ccb8aa0 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 7.7E-18 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS03725 c2e5725923faa1c35dc111fd4ccb8aa0 237 Gene3D G3DSA:1.10.10.10 1 68 2.2E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS03725 c2e5725923faa1c35dc111fd4ccb8aa0 237 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 231 5.0E-83 T 29-03-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 CHH28_RS03725 c2e5725923faa1c35dc111fd4ccb8aa0 237 SUPERFAMILY SSF64288 56 230 1.44E-38 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CHH28_RS03725 c2e5725923faa1c35dc111fd4ccb8aa0 237 SUPERFAMILY SSF46785 3 72 7.27E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS03725 c2e5725923faa1c35dc111fd4ccb8aa0 237 Pfam PF07702 UTRA domain 89 226 1.7E-29 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CHH28_RS03725 c2e5725923faa1c35dc111fd4ccb8aa0 237 SMART SM00345 9 68 3.3E-18 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS14340 783f861eadccf3b3b730fd63d0e9d89f 102 Pfam PF04358 DsrC like protein 3 102 1.6E-38 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE CHH28_RS14340 783f861eadccf3b3b730fd63d0e9d89f 102 Gene3D G3DSA:1.10.10.370 33 101 1.9E-27 T 29-03-2018 CHH28_RS14340 783f861eadccf3b3b730fd63d0e9d89f 102 SUPERFAMILY SSF69721 2 102 1.44E-35 T 29-03-2018 IPR025526 DsrC-like domain CHH28_RS14340 783f861eadccf3b3b730fd63d0e9d89f 102 Gene3D G3DSA:3.30.1420.10 2 32 3.7E-15 T 29-03-2018 CHH28_RS14340 783f861eadccf3b3b730fd63d0e9d89f 102 PIRSF PIRSF006223 1 102 4.1E-36 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE CHH28_RS14340 783f861eadccf3b3b730fd63d0e9d89f 102 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 3 102 8.1E-42 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE CHH28_RS04445 7bf640d389c80a1f9199932e1cb27b7e 273 Pfam PF01553 Acyltransferase 78 203 5.0E-18 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CHH28_RS04445 7bf640d389c80a1f9199932e1cb27b7e 273 Gene3D G3DSA:3.40.1130.10 51 267 1.9E-32 T 29-03-2018 CHH28_RS04445 7bf640d389c80a1f9199932e1cb27b7e 273 SMART SM00563 92 206 3.0E-27 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CHH28_RS04445 7bf640d389c80a1f9199932e1cb27b7e 273 SUPERFAMILY SSF69593 25 254 2.62E-34 T 29-03-2018 CHH28_RS07785 0d418793d03eb0ff89114b6639a5edfa 603 Gene3D G3DSA:2.60.40.10 18 113 5.5E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS07785 0d418793d03eb0ff89114b6639a5edfa 603 Gene3D G3DSA:2.120.10.30 230 395 2.0E-10 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CHH28_RS07785 0d418793d03eb0ff89114b6639a5edfa 603 SUPERFAMILY SSF63829 426 552 1.44E-32 T 29-03-2018 CHH28_RS07785 0d418793d03eb0ff89114b6639a5edfa 603 SUPERFAMILY SSF63829 222 387 1.44E-32 T 29-03-2018 CHH28_RS07785 0d418793d03eb0ff89114b6639a5edfa 603 Gene3D G3DSA:2.120.10.30 417 595 4.7E-11 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CHH28_RS15435 0ccca4a98a76c61f7b257dd75d56e847 71 SUPERFAMILY SSF158997 1 56 8.37E-20 T 29-03-2018 CHH28_RS15435 0ccca4a98a76c61f7b257dd75d56e847 71 Pfam PF03966 Trm112p-like protein 2 41 1.5E-9 T 29-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 CHH28_RS15435 0ccca4a98a76c61f7b257dd75d56e847 71 Gene3D G3DSA:2.20.25.10 8 68 1.8E-22 T 29-03-2018 CHH28_RS15435 0ccca4a98a76c61f7b257dd75d56e847 71 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 26.206 T 29-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 CHH28_RS13025 eb74beaf412f4e95c0ab4eccb1220897 449 SUPERFAMILY SSF55920 153 375 2.22E-49 T 29-03-2018 IPR000994 Peptidase M24 CHH28_RS13025 eb74beaf412f4e95c0ab4eccb1220897 449 SUPERFAMILY SSF53092 5 151 1.71E-33 T 29-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal CHH28_RS13025 eb74beaf412f4e95c0ab4eccb1220897 449 Pfam PF01321 Creatinase/Prolidase N-terminal domain 17 152 2.6E-20 T 29-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 CHH28_RS13025 eb74beaf412f4e95c0ab4eccb1220897 449 Gene3D G3DSA:3.40.350.10 13 152 6.6E-24 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CHH28_RS13025 eb74beaf412f4e95c0ab4eccb1220897 449 Pfam PF00557 Metallopeptidase family M24 161 370 4.9E-32 T 29-03-2018 IPR000994 Peptidase M24 CHH28_RS13025 eb74beaf412f4e95c0ab4eccb1220897 449 Gene3D G3DSA:3.90.230.10 153 383 1.5E-40 T 29-03-2018 CHH28_RS11700 0fc3e7dea7e13c5989c9cd17ea6394cb 69 SUPERFAMILY SSF50249 4 68 5.88E-25 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS11700 0fc3e7dea7e13c5989c9cd17ea6394cb 69 PRINTS PR00050 Cold shock protein signature 42 60 2.3E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CHH28_RS11700 0fc3e7dea7e13c5989c9cd17ea6394cb 69 PRINTS PR00050 Cold shock protein signature 27 36 2.3E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CHH28_RS11700 0fc3e7dea7e13c5989c9cd17ea6394cb 69 PRINTS PR00050 Cold shock protein signature 7 22 2.3E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CHH28_RS11700 0fc3e7dea7e13c5989c9cd17ea6394cb 69 SMART SM00357 6 69 1.8E-29 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CHH28_RS11700 0fc3e7dea7e13c5989c9cd17ea6394cb 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 29-03-2018 IPR019844 Cold-shock conserved site CHH28_RS11700 0fc3e7dea7e13c5989c9cd17ea6394cb 69 PIRSF PIRSF002599 1 69 1.8E-23 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CHH28_RS11700 0fc3e7dea7e13c5989c9cd17ea6394cb 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 2.6E-28 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CHH28_RS11700 0fc3e7dea7e13c5989c9cd17ea6394cb 69 Gene3D G3DSA:2.40.50.140 1 69 1.3E-26 T 29-03-2018 CHH28_RS05725 3afa1579da6954669d5f6f49d78ab38d 244 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 108 206 1.1E-7 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS05725 3afa1579da6954669d5f6f49d78ab38d 244 SUPERFAMILY SSF53850 19 233 8.69E-20 T 29-03-2018 CHH28_RS05725 3afa1579da6954669d5f6f49d78ab38d 244 Gene3D G3DSA:3.40.190.10 94 198 1.9E-9 T 29-03-2018 CHH28_RS09630 93095c620c45b6d1b5fab125330a7de8 563 Gene3D G3DSA:3.60.110.10 1 253 6.6E-62 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CHH28_RS09630 93095c620c45b6d1b5fab125330a7de8 563 Gene3D G3DSA:3.40.50.620 285 562 4.6E-66 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS09630 93095c620c45b6d1b5fab125330a7de8 563 SUPERFAMILY SSF56317 4 241 3.92E-62 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CHH28_RS09630 93095c620c45b6d1b5fab125330a7de8 563 SUPERFAMILY SSF52402 284 545 9.48E-77 T 29-03-2018 CHH28_RS09630 93095c620c45b6d1b5fab125330a7de8 563 TIGRFAM TIGR00552 nadE: NAD+ synthetase 295 539 2.6E-62 T 29-03-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 CHH28_RS09630 93095c620c45b6d1b5fab125330a7de8 563 Pfam PF02540 NAD synthase 288 536 9.0E-75 T 29-03-2018 IPR022310 NAD/GMP synthase CHH28_RS09630 93095c620c45b6d1b5fab125330a7de8 563 PIRSF PIRSF006630 2 562 1.6E-199 T 29-03-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CHH28_RS09630 93095c620c45b6d1b5fab125330a7de8 563 Pfam PF00795 Carbon-nitrogen hydrolase 9 240 5.7E-30 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CHH28_RS10870 82656aaccd02fce32f9c4b14eced754e 455 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 400 416 3.1E-20 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS10870 82656aaccd02fce32f9c4b14eced754e 455 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 437 454 3.1E-20 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS10870 82656aaccd02fce32f9c4b14eced754e 455 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 249 263 3.1E-20 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS10870 82656aaccd02fce32f9c4b14eced754e 455 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 350 362 3.1E-20 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS10870 82656aaccd02fce32f9c4b14eced754e 455 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 278 288 3.1E-20 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS10870 82656aaccd02fce32f9c4b14eced754e 455 Gene3D G3DSA:3.40.50.150 258 453 1.3E-47 T 29-03-2018 CHH28_RS10870 82656aaccd02fce32f9c4b14eced754e 455 Pfam PF01189 16S rRNA methyltransferase RsmB/F 267 437 3.6E-43 T 29-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CHH28_RS10870 82656aaccd02fce32f9c4b14eced754e 455 SUPERFAMILY SSF53335 182 454 8.77E-53 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS01285 f4a0c5a18413b240501d1a7e7c45aa3e 691 Pfam PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal 55 529 2.5E-54 T 29-03-2018 IPR031329 Neutral/alkaline non-lysosomal ceramidase, N-terminal KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119|Reactome: R-HSA-1660662 CHH28_RS11585 32793ccf68656d74d20c1e9a87a4b6cb 251 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 243 1.6E-44 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CHH28_RS11585 32793ccf68656d74d20c1e9a87a4b6cb 251 Gene3D G3DSA:3.90.226.10 1 250 1.0E-57 T 29-03-2018 CHH28_RS11585 32793ccf68656d74d20c1e9a87a4b6cb 251 SUPERFAMILY SSF52096 1 248 1.68E-59 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS12400 ce540650221971754aca876c72e102b5 120 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 31 110 6.2E-27 T 29-03-2018 IPR003849 Preprotein translocase YajC CHH28_RS12400 ce540650221971754aca876c72e102b5 120 SMART SM01323 28 110 8.6E-40 T 29-03-2018 IPR003849 Preprotein translocase YajC CHH28_RS12400 ce540650221971754aca876c72e102b5 120 Pfam PF02699 Preprotein translocase subunit 32 107 3.5E-27 T 29-03-2018 IPR003849 Preprotein translocase YajC CHH28_RS12400 ce540650221971754aca876c72e102b5 120 PRINTS PR01853 Bacterial YajC preprotein translocase signature 68 86 8.1E-13 T 29-03-2018 IPR003849 Preprotein translocase YajC CHH28_RS12400 ce540650221971754aca876c72e102b5 120 PRINTS PR01853 Bacterial YajC preprotein translocase signature 30 50 8.1E-13 T 29-03-2018 IPR003849 Preprotein translocase YajC CHH28_RS17000 b89d77b32efe72205e3d4ff2f82d83ad 199 TIGRFAM TIGR00498 lexA: repressor LexA 1 198 9.4E-77 T 29-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CHH28_RS17000 b89d77b32efe72205e3d4ff2f82d83ad 199 SUPERFAMILY SSF46785 3 70 5.17E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17000 b89d77b32efe72205e3d4ff2f82d83ad 199 Pfam PF01726 LexA DNA binding domain 1 65 4.2E-30 T 29-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CHH28_RS17000 b89d77b32efe72205e3d4ff2f82d83ad 199 Gene3D G3DSA:2.10.109.10 80 199 5.7E-28 T 29-03-2018 CHH28_RS17000 b89d77b32efe72205e3d4ff2f82d83ad 199 Hamap MF_00015 LexA repressor [lexA]. 3 199 33.065 T 29-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CHH28_RS17000 b89d77b32efe72205e3d4ff2f82d83ad 199 Pfam PF00717 Peptidase S24-like 114 180 2.1E-16 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CHH28_RS17000 b89d77b32efe72205e3d4ff2f82d83ad 199 SUPERFAMILY SSF51306 76 197 8.11E-37 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CHH28_RS17000 b89d77b32efe72205e3d4ff2f82d83ad 199 Gene3D G3DSA:1.10.10.10 1 70 8.0E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17000 b89d77b32efe72205e3d4ff2f82d83ad 199 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 2.2E-10 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CHH28_RS17000 b89d77b32efe72205e3d4ff2f82d83ad 199 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 2.2E-10 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CHH28_RS17000 b89d77b32efe72205e3d4ff2f82d83ad 199 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 2.2E-10 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CHH28_RS04530 38ae27a31735d38d469a2d53dbb94045 318 Pfam PF02911 Formyl transferase, C-terminal domain 205 302 3.0E-24 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CHH28_RS04530 38ae27a31735d38d469a2d53dbb94045 318 SUPERFAMILY SSF53328 3 208 1.06E-64 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CHH28_RS04530 38ae27a31735d38d469a2d53dbb94045 318 Pfam PF00551 Formyl transferase 6 180 3.8E-44 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CHH28_RS04530 38ae27a31735d38d469a2d53dbb94045 318 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 3 305 35.235 T 29-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CHH28_RS04530 38ae27a31735d38d469a2d53dbb94045 318 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 29-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CHH28_RS04530 38ae27a31735d38d469a2d53dbb94045 318 Gene3D G3DSA:3.10.25.10 208 309 8.7E-25 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CHH28_RS04530 38ae27a31735d38d469a2d53dbb94045 318 SUPERFAMILY SSF50486 206 305 2.55E-27 T 29-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CHH28_RS04530 38ae27a31735d38d469a2d53dbb94045 318 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 4 307 5.5E-93 T 29-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CHH28_RS04530 38ae27a31735d38d469a2d53dbb94045 318 Gene3D G3DSA:3.40.50.170 1 207 7.4E-66 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CHH28_RS12445 9877d0ae44ea26f1a2a5a77dd853ee34 161 SUPERFAMILY SSF89963 2 85 8.37E-28 T 29-03-2018 IPR007551 Protein of unknown function DUF520 CHH28_RS12445 9877d0ae44ea26f1a2a5a77dd853ee34 161 Gene3D G3DSA:3.30.70.860 95 160 1.3E-28 T 29-03-2018 IPR035571 UPF0234/UPF0381 domain CHH28_RS12445 9877d0ae44ea26f1a2a5a77dd853ee34 161 SUPERFAMILY SSF89963 88 161 7.72E-25 T 29-03-2018 IPR007551 Protein of unknown function DUF520 CHH28_RS12445 9877d0ae44ea26f1a2a5a77dd853ee34 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 25.803 T 29-03-2018 IPR007551 Protein of unknown function DUF520 CHH28_RS12445 9877d0ae44ea26f1a2a5a77dd853ee34 161 Gene3D G3DSA:3.30.70.990 10 94 4.3E-28 T 29-03-2018 IPR035570 UPF0234 N-terminal domain CHH28_RS12445 9877d0ae44ea26f1a2a5a77dd853ee34 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 1.9E-59 T 29-03-2018 IPR007551 Protein of unknown function DUF520 CHH28_RS02475 e3fe90789fef1bfe9b8f558f39310142 551 Pfam PF03109 ABC1 family 111 235 5.2E-33 T 29-03-2018 IPR004147 UbiB domain CHH28_RS02475 e3fe90789fef1bfe9b8f558f39310142 551 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 550 51.467 T 29-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 CHH28_RS02475 e3fe90789fef1bfe9b8f558f39310142 551 Gene3D G3DSA:3.30.200.20 100 248 3.3E-19 T 29-03-2018 CHH28_RS02475 e3fe90789fef1bfe9b8f558f39310142 551 SUPERFAMILY SSF56112 93 162 9.73E-45 T 29-03-2018 IPR011009 Protein kinase-like domain CHH28_RS02475 e3fe90789fef1bfe9b8f558f39310142 551 SUPERFAMILY SSF56112 202 440 9.73E-45 T 29-03-2018 IPR011009 Protein kinase-like domain CHH28_RS02475 e3fe90789fef1bfe9b8f558f39310142 551 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 5 449 1.9E-174 T 29-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 CHH28_RS02640 0f3672f1585b2e19a7c26d126e1a3ced 577 SUPERFAMILY SSF51445 530 562 3.35E-94 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CHH28_RS02640 0f3672f1585b2e19a7c26d126e1a3ced 577 SUPERFAMILY SSF51445 161 451 3.35E-94 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CHH28_RS02640 0f3672f1585b2e19a7c26d126e1a3ced 577 Gene3D G3DSA:3.20.20.80 157 570 4.9E-89 T 29-03-2018 CHH28_RS02640 0f3672f1585b2e19a7c26d126e1a3ced 577 SMART SM00636 168 558 4.8E-128 T 29-03-2018 IPR011583 Chitinase II GO:0008061 CHH28_RS02640 0f3672f1585b2e19a7c26d126e1a3ced 577 SUPERFAMILY SSF54556 451 529 2.75E-16 T 29-03-2018 IPR029070 Chitinase insertion domain CHH28_RS02640 0f3672f1585b2e19a7c26d126e1a3ced 577 Gene3D G3DSA:2.60.40.10 24 136 3.0E-12 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS02640 0f3672f1585b2e19a7c26d126e1a3ced 577 Pfam PF08329 Chitinase A, N-terminal domain 58 165 2.8E-14 T 29-03-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CHH28_RS02640 0f3672f1585b2e19a7c26d126e1a3ced 577 ProSitePatterns PS01095 Chitinases family 18 active site. 315 323 - T 29-03-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CHH28_RS02640 0f3672f1585b2e19a7c26d126e1a3ced 577 SUPERFAMILY SSF81296 38 137 6.02E-17 T 29-03-2018 IPR014756 Immunoglobulin E-set CHH28_RS02640 0f3672f1585b2e19a7c26d126e1a3ced 577 Pfam PF00704 Glycosyl hydrolases family 18 170 558 1.9E-85 T 29-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 CHH28_RS04565 a24329c8682b6a7527cfc476748a9c5b 747 Gene3D G3DSA:3.90.550.10 142 407 3.3E-50 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS04565 a24329c8682b6a7527cfc476748a9c5b 747 SUPERFAMILY SSF53448 144 443 1.13E-45 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS04565 a24329c8682b6a7527cfc476748a9c5b 747 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 13 731 4.0E-260 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CHH28_RS04565 a24329c8682b6a7527cfc476748a9c5b 747 Pfam PF00535 Glycosyl transferase family 2 145 335 4.4E-34 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CHH28_RS04565 a24329c8682b6a7527cfc476748a9c5b 747 Gene3D G3DSA:2.40.10.220 576 715 7.9E-10 T 29-03-2018 CHH28_RS04565 a24329c8682b6a7527cfc476748a9c5b 747 PRINTS PR01439 Cellulose synthase subunit A signature 68 88 5.0E-26 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CHH28_RS04565 a24329c8682b6a7527cfc476748a9c5b 747 PRINTS PR01439 Cellulose synthase subunit A signature 413 439 5.0E-26 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CHH28_RS04565 a24329c8682b6a7527cfc476748a9c5b 747 PRINTS PR01439 Cellulose synthase subunit A signature 151 170 5.0E-26 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CHH28_RS04565 a24329c8682b6a7527cfc476748a9c5b 747 PRINTS PR01439 Cellulose synthase subunit A signature 96 121 5.0E-26 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CHH28_RS04565 a24329c8682b6a7527cfc476748a9c5b 747 PRINTS PR01439 Cellulose synthase subunit A signature 442 461 5.0E-26 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CHH28_RS04565 a24329c8682b6a7527cfc476748a9c5b 747 PRINTS PR01439 Cellulose synthase subunit A signature 482 501 5.0E-26 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CHH28_RS04565 a24329c8682b6a7527cfc476748a9c5b 747 PRINTS PR01439 Cellulose synthase subunit A signature 554 575 5.0E-26 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CHH28_RS05055 387df90e51f582458d6195f58fb1abc8 249 SMART SM00062 39 242 0.0015 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS05055 387df90e51f582458d6195f58fb1abc8 249 Gene3D G3DSA:3.40.190.10 21 139 5.0E-15 T 29-03-2018 CHH28_RS05055 387df90e51f582458d6195f58fb1abc8 249 SUPERFAMILY SSF53850 21 238 3.65E-37 T 29-03-2018 CHH28_RS05055 387df90e51f582458d6195f58fb1abc8 249 Gene3D G3DSA:3.40.190.10 140 243 5.3E-9 T 29-03-2018 CHH28_RS05055 387df90e51f582458d6195f58fb1abc8 249 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 238 3.6E-25 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS12945 6be09bed53ba7c274a55d20ef3c30c0e 1032 Gene3D G3DSA:2.40.50.140 923 1027 3.7E-7 T 29-03-2018 CHH28_RS12945 6be09bed53ba7c274a55d20ef3c30c0e 1032 Gene3D G3DSA:3.20.20.140 15 245 1.5E-33 T 29-03-2018 CHH28_RS12945 6be09bed53ba7c274a55d20ef3c30c0e 1032 Pfam PF14579 Helix-hairpin-helix motif 775 864 7.1E-16 T 29-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS12945 6be09bed53ba7c274a55d20ef3c30c0e 1032 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 281 702 1.4E-142 T 29-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS12945 6be09bed53ba7c274a55d20ef3c30c0e 1032 SUPERFAMILY SSF89550 16 201 1.75E-8 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CHH28_RS12945 6be09bed53ba7c274a55d20ef3c30c0e 1032 Pfam PF01336 OB-fold nucleic acid binding domain 944 1004 1.2E-7 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CHH28_RS12945 6be09bed53ba7c274a55d20ef3c30c0e 1032 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 16 1032 12.931 T 29-03-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS12945 6be09bed53ba7c274a55d20ef3c30c0e 1032 SMART SM00481 17 86 9.5E-10 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CHH28_RS12945 6be09bed53ba7c274a55d20ef3c30c0e 1032 Pfam PF02811 PHP domain 18 138 2.6E-14 T 29-03-2018 IPR004013 PHP domain GO:0003824 CHH28_RS12945 6be09bed53ba7c274a55d20ef3c30c0e 1032 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 16 975 1.8E-156 T 29-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CHH28_RS03350 6468eb5da71360ac7acf44961d9c6c61 150 Pfam PF07366 SnoaL-like polyketide cyclase 17 140 2.1E-20 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CHH28_RS03350 6468eb5da71360ac7acf44961d9c6c61 150 Gene3D G3DSA:3.10.450.50 2 144 4.1E-17 T 29-03-2018 CHH28_RS03350 6468eb5da71360ac7acf44961d9c6c61 150 SUPERFAMILY SSF54427 12 141 9.7E-22 T 29-03-2018 IPR032710 NTF2-like domain CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 SMART SM00889 487 606 1.9E-65 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 Gene3D G3DSA:3.40.50.300 3 293 2.4E-63 T 29-03-2018 CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 Pfam PF00679 Elongation factor G C-terminus 608 693 2.0E-29 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 SMART SM00838 608 695 2.1E-57 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 SUPERFAMILY SSF54980 611 697 1.82E-28 T 29-03-2018 IPR035647 EF-G domain III/V-like CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 698 0.0 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 699 109.945 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 SUPERFAMILY SSF54211 486 604 2.45E-40 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 SUPERFAMILY SSF50447 271 411 5.08E-36 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.9E-68 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.0E-17 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 2.0E-17 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 2.0E-17 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 2.0E-17 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 2.0E-17 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 Pfam PF03144 Elongation factor Tu domain 2 331 398 3.0E-18 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 Gene3D G3DSA:3.30.70.240 622 699 4.1E-31 T 29-03-2018 CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 Pfam PF03764 Elongation factor G, domain IV 486 601 2.3E-43 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 SUPERFAMILY SSF52540 6 288 2.19E-108 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 Gene3D G3DSA:2.40.30.10 294 408 8.5E-32 T 29-03-2018 CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 Gene3D G3DSA:3.30.70.870 409 499 5.1E-37 T 29-03-2018 CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 Gene3D G3DSA:3.30.230.10 500 621 3.5E-39 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 185 4.7E-35 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 Pfam PF14492 Elongation Factor G, domain II 411 485 3.8E-34 T 29-03-2018 CHH28_RS06000 69fef89e43c5aadabc0fa71fd572ad7a 699 SUPERFAMILY SSF54980 411 488 1.15E-25 T 29-03-2018 IPR035647 EF-G domain III/V-like CHH28_RS09915 2c4587bea342a6bc171ab3b16e7f22b5 562 Pfam PF08502 LeuA allosteric (dimerisation) domain 432 559 5.2E-21 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CHH28_RS09915 2c4587bea342a6bc171ab3b16e7f22b5 562 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 17 561 49.716 T 29-03-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CHH28_RS09915 2c4587bea342a6bc171ab3b16e7f22b5 562 SUPERFAMILY SSF110921 454 558 8.89E-23 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CHH28_RS09915 2c4587bea342a6bc171ab3b16e7f22b5 562 Pfam PF00682 HMGL-like 42 315 6.6E-71 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CHH28_RS09915 2c4587bea342a6bc171ab3b16e7f22b5 562 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 49 65 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CHH28_RS09915 2c4587bea342a6bc171ab3b16e7f22b5 562 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 252 265 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CHH28_RS09915 2c4587bea342a6bc171ab3b16e7f22b5 562 SUPERFAMILY SSF89000 397 446 8.63E-12 T 29-03-2018 CHH28_RS09915 2c4587bea342a6bc171ab3b16e7f22b5 562 SMART SM00917 431 560 3.1E-15 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CHH28_RS09915 2c4587bea342a6bc171ab3b16e7f22b5 562 SUPERFAMILY SSF51569 31 339 3.11E-95 T 29-03-2018 CHH28_RS09915 2c4587bea342a6bc171ab3b16e7f22b5 562 Gene3D G3DSA:3.20.20.70 19 385 1.3E-101 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS15915 6a4e13977cc09677ad5d700ccf70b374 527 Gene3D G3DSA:3.30.70.270 328 514 2.3E-48 T 29-03-2018 CHH28_RS15915 6a4e13977cc09677ad5d700ccf70b374 527 SMART SM00267 335 514 5.4E-57 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS15915 6a4e13977cc09677ad5d700ccf70b374 527 Pfam PF05228 CHASE4 domain 54 206 8.8E-21 T 29-03-2018 IPR007892 CHASE4 CHH28_RS15915 6a4e13977cc09677ad5d700ccf70b374 527 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 343 513 1.7E-44 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS15915 6a4e13977cc09677ad5d700ccf70b374 527 SUPERFAMILY SSF55073 350 513 1.26E-41 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS15915 6a4e13977cc09677ad5d700ccf70b374 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 346 510 1.6E-44 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS07270 9cf4d1676d840a98474dd83f954d523b 231 Pfam PF13649 Methyltransferase domain 61 153 2.9E-15 T 29-03-2018 CHH28_RS07270 9cf4d1676d840a98474dd83f954d523b 231 Gene3D G3DSA:3.40.50.150 13 226 1.3E-26 T 29-03-2018 CHH28_RS07270 9cf4d1676d840a98474dd83f954d523b 231 SUPERFAMILY SSF53335 20 223 1.44E-28 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS00515 17f5a424198f56ef06a50974ab60d66e 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 5 170 7.9E-94 T 29-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CHH28_RS00515 17f5a424198f56ef06a50974ab60d66e 171 Gene3D G3DSA:3.10.129.10 1 171 4.2E-51 T 29-03-2018 CHH28_RS00515 17f5a424198f56ef06a50974ab60d66e 171 SUPERFAMILY SSF54637 2 168 4.1E-59 T 29-03-2018 IPR029069 HotDog domain CHH28_RS00515 17f5a424198f56ef06a50974ab60d66e 171 Pfam PF07977 FabA-like domain 28 158 1.5E-53 T 29-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CHH28_RS00515 17f5a424198f56ef06a50974ab60d66e 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 51.662 T 29-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CHH28_RS02080 f8a222c5ca51c613c3b6d75968f55dcd 575 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 443 571 1.8E-23 T 29-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CHH28_RS02080 f8a222c5ca51c613c3b6d75968f55dcd 575 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 148 251 5.7E-15 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CHH28_RS02080 f8a222c5ca51c613c3b6d75968f55dcd 575 SUPERFAMILY SSF56645 21 271 1.31E-53 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CHH28_RS02080 f8a222c5ca51c613c3b6d75968f55dcd 575 Gene3D G3DSA:2.40.110.10 146 253 8.8E-25 T 29-03-2018 CHH28_RS02080 f8a222c5ca51c613c3b6d75968f55dcd 575 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 25 142 8.4E-13 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS02080 f8a222c5ca51c613c3b6d75968f55dcd 575 SUPERFAMILY SSF47203 265 436 5.48E-46 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS02080 f8a222c5ca51c613c3b6d75968f55dcd 575 Gene3D G3DSA:1.10.540.10 8 144 1.5E-15 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS02080 f8a222c5ca51c613c3b6d75968f55dcd 575 Gene3D G3DSA:1.20.140.10 276 441 3.5E-41 T 29-03-2018 CHH28_RS02080 f8a222c5ca51c613c3b6d75968f55dcd 575 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 262 426 5.3E-22 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS14190 61a59ee4c00d3b3a647cb60c538879ea 360 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 285 291 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CHH28_RS14190 61a59ee4c00d3b3a647cb60c538879ea 360 SUPERFAMILY SSF53335 179 336 2.84E-25 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS14190 61a59ee4c00d3b3a647cb60c538879ea 360 Gene3D G3DSA:3.40.50.150 172 347 1.7E-26 T 29-03-2018 CHH28_RS14190 61a59ee4c00d3b3a647cb60c538879ea 360 Pfam PF05175 Methyltransferase small domain 188 348 4.8E-47 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CHH28_RS05805 20919dd1f55f62869e23de49c1303da8 343 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 29-03-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CHH28_RS05805 20919dd1f55f62869e23de49c1303da8 343 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 138 3.2E-35 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CHH28_RS05805 20919dd1f55f62869e23de49c1303da8 343 SMART SM00859 3 141 7.8E-53 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CHH28_RS05805 20919dd1f55f62869e23de49c1303da8 343 Gene3D G3DSA:3.40.50.720 1 160 3.4E-44 T 29-03-2018 CHH28_RS05805 20919dd1f55f62869e23de49c1303da8 343 SUPERFAMILY SSF55347 149 311 6.8E-50 T 29-03-2018 CHH28_RS05805 20919dd1f55f62869e23de49c1303da8 343 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 337 41.708 T 29-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CHH28_RS05805 20919dd1f55f62869e23de49c1303da8 343 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 343 2.3E-130 T 29-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CHH28_RS05805 20919dd1f55f62869e23de49c1303da8 343 SUPERFAMILY SSF51735 2 172 2.73E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS05805 20919dd1f55f62869e23de49c1303da8 343 Gene3D G3DSA:3.30.360.10 161 311 1.9E-56 T 29-03-2018 CHH28_RS05805 20919dd1f55f62869e23de49c1303da8 343 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 158 314 1.5E-17 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CHH28_RS18795 a924c3be9adfd60aebe47b8cd4493555 185 Gene3D G3DSA:2.40.50.180 67 107 7.8E-17 T 29-03-2018 CHH28_RS18795 a924c3be9adfd60aebe47b8cd4493555 185 Pfam PF01584 CheW-like domain 29 168 2.2E-32 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS18795 a924c3be9adfd60aebe47b8cd4493555 185 Gene3D G3DSA:2.30.30.40 17 66 3.2E-9 T 29-03-2018 CHH28_RS18795 a924c3be9adfd60aebe47b8cd4493555 185 SUPERFAMILY SSF50341 24 168 7.72E-37 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS18795 a924c3be9adfd60aebe47b8cd4493555 185 Gene3D G3DSA:2.30.30.40 108 160 2.0E-12 T 29-03-2018 CHH28_RS18795 a924c3be9adfd60aebe47b8cd4493555 185 SMART SM00260 25 166 1.1E-35 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS13350 f1f2a047fa618961551d3ebe81a5eeee 432 SUPERFAMILY SSF116734 219 430 2.94E-35 T 29-03-2018 CHH28_RS13350 f1f2a047fa618961551d3ebe81a5eeee 432 Gene3D G3DSA:3.90.220.20 195 404 4.7E-33 T 29-03-2018 CHH28_RS13350 f1f2a047fa618961551d3ebe81a5eeee 432 Gene3D G3DSA:3.90.220.20 8 194 3.5E-21 T 29-03-2018 CHH28_RS13350 f1f2a047fa618961551d3ebe81a5eeee 432 Pfam PF01420 Type I restriction modification DNA specificity domain 289 408 2.1E-4 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CHH28_RS13350 f1f2a047fa618961551d3ebe81a5eeee 432 Pfam PF01420 Type I restriction modification DNA specificity domain 21 198 2.3E-5 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CHH28_RS13350 f1f2a047fa618961551d3ebe81a5eeee 432 SUPERFAMILY SSF116734 6 220 3.27E-32 T 29-03-2018 CHH28_RS14345 ec7e3b6b292fe401a74ab396202ca6b3 84 SUPERFAMILY SSF75169 3 82 1.88E-5 T 29-03-2018 IPR027396 DsrEFH-like CHH28_RS15475 d982e79789d7bc503b68802e121d748a 415 Pfam PF12704 MacB-like periplasmic core domain 30 203 6.0E-15 T 29-03-2018 IPR025857 MacB-like periplasmic core domain CHH28_RS15475 d982e79789d7bc503b68802e121d748a 415 Pfam PF02687 FtsX-like permease family 302 408 7.1E-14 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CHH28_RS15475 d982e79789d7bc503b68802e121d748a 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 7 415 2.7E-153 T 29-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CHH28_RS09720 4f2452e1f8ed539111fd4b73dc4aab3e 147 Pfam PF01220 Dehydroquinase class II 3 140 2.0E-63 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CHH28_RS09720 4f2452e1f8ed539111fd4b73dc4aab3e 147 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 133 3.0E-45 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CHH28_RS09720 4f2452e1f8ed539111fd4b73dc4aab3e 147 Gene3D G3DSA:3.40.50.9100 1 147 5.4E-70 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CHH28_RS09720 4f2452e1f8ed539111fd4b73dc4aab3e 147 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 143 1.2E-63 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CHH28_RS09720 4f2452e1f8ed539111fd4b73dc4aab3e 147 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 29-03-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CHH28_RS09720 4f2452e1f8ed539111fd4b73dc4aab3e 147 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 147 75.008 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CHH28_RS09720 4f2452e1f8ed539111fd4b73dc4aab3e 147 PIRSF PIRSF001399 1 147 8.8E-62 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CHH28_RS09720 4f2452e1f8ed539111fd4b73dc4aab3e 147 SUPERFAMILY SSF52304 3 146 6.54E-64 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CHH28_RS11875 68e454e98e76b3d69efd3bd061c01a4d 189 SUPERFAMILY SSF64438 4 155 5.22E-47 T 29-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CHH28_RS11875 68e454e98e76b3d69efd3bd061c01a4d 189 Pfam PF03975 CheD chemotactic sensory transduction 54 150 3.1E-30 T 29-03-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 CHH28_RS11875 68e454e98e76b3d69efd3bd061c01a4d 189 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 5 155 25.385 T 29-03-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 CHH28_RS16835 73547a296027a1b9905df3fbc2b4ad1d 653 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 54 638 2.3E-223 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16835 73547a296027a1b9905df3fbc2b4ad1d 653 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.7E-50 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16835 73547a296027a1b9905df3fbc2b4ad1d 653 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.7E-50 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16835 73547a296027a1b9905df3fbc2b4ad1d 653 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.7E-50 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16835 73547a296027a1b9905df3fbc2b4ad1d 653 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.7E-50 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16835 73547a296027a1b9905df3fbc2b4ad1d 653 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.7E-50 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16835 73547a296027a1b9905df3fbc2b4ad1d 653 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 628 641 1.7E-50 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16835 73547a296027a1b9905df3fbc2b4ad1d 653 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.7E-50 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16835 73547a296027a1b9905df3fbc2b4ad1d 653 Pfam PF01578 Cytochrome C assembly protein 89 296 4.1E-54 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CHH28_RS16835 73547a296027a1b9905df3fbc2b4ad1d 653 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.9E-87 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16835 73547a296027a1b9905df3fbc2b4ad1d 653 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.9E-87 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16835 73547a296027a1b9905df3fbc2b4ad1d 653 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.9E-87 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16835 73547a296027a1b9905df3fbc2b4ad1d 653 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.9E-87 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16835 73547a296027a1b9905df3fbc2b4ad1d 653 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.9E-87 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16835 73547a296027a1b9905df3fbc2b4ad1d 653 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.9E-87 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16835 73547a296027a1b9905df3fbc2b4ad1d 653 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.9E-87 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16835 73547a296027a1b9905df3fbc2b4ad1d 653 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.9E-87 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16835 73547a296027a1b9905df3fbc2b4ad1d 653 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 635 7.1E-115 T 29-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CHH28_RS12325 fe3eadfca06309b09b1fd0d31538265d 389 Gene3D G3DSA:3.40.50.300 1 285 7.5E-67 T 29-03-2018 CHH28_RS12325 fe3eadfca06309b09b1fd0d31538265d 389 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 2 382 3.7E-168 T 29-03-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 CHH28_RS12325 fe3eadfca06309b09b1fd0d31538265d 389 SMART SM00382 50 251 4.8E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS12325 fe3eadfca06309b09b1fd0d31538265d 389 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS12325 fe3eadfca06309b09b1fd0d31538265d 389 Gene3D G3DSA:3.20.20.70 302 389 0.0089 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS12325 fe3eadfca06309b09b1fd0d31538265d 389 SUPERFAMILY SSF52540 41 271 1.44E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS12325 fe3eadfca06309b09b1fd0d31538265d 389 Pfam PF00005 ABC transporter 42 193 4.8E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS04410 f81c4dc4b9e5deee77afcf62f44190e4 371 SUPERFAMILY SSF52540 1 359 1.14E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS04410 f81c4dc4b9e5deee77afcf62f44190e4 371 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 355 4.6E-25 T 29-03-2018 IPR003395 RecF/RecN/SMC, N-terminal CHH28_RS04410 f81c4dc4b9e5deee77afcf62f44190e4 371 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 353 1.0E-97 T 29-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CHH28_RS04410 f81c4dc4b9e5deee77afcf62f44190e4 371 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 29-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CHH28_RS04410 f81c4dc4b9e5deee77afcf62f44190e4 371 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 29-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CHH28_RS04410 f81c4dc4b9e5deee77afcf62f44190e4 371 Gene3D G3DSA:3.40.50.300 1 359 1.0E-27 T 29-03-2018 CHH28_RS04410 f81c4dc4b9e5deee77afcf62f44190e4 371 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 371 82.401 T 29-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CHH28_RS13575 a99b6697a9fb6bd0f8b03999f982532c 365 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 347 357 - T 29-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site CHH28_RS13575 a99b6697a9fb6bd0f8b03999f982532c 365 Gene3D G3DSA:3.40.50.150 139 365 1.6E-32 T 29-03-2018 CHH28_RS13575 a99b6697a9fb6bd0f8b03999f982532c 365 Gene3D G3DSA:1.20.5.20 12 138 4.3E-4 T 29-03-2018 CHH28_RS13575 a99b6697a9fb6bd0f8b03999f982532c 365 SUPERFAMILY SSF53335 13 364 3.44E-49 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS13575 a99b6697a9fb6bd0f8b03999f982532c 365 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 298 327 - T 29-03-2018 IPR030390 RNA methyltransferase TrmA, active site CHH28_RS13575 a99b6697a9fb6bd0f8b03999f982532c 365 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 14 365 1.2E-159 T 29-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CHH28_RS13575 a99b6697a9fb6bd0f8b03999f982532c 365 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 14 365 1.7E-155 T 29-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CHH28_RS13575 a99b6697a9fb6bd0f8b03999f982532c 365 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 7 365 41.541 T 29-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CHH28_RS06510 71c2024ce5ed20deb0a2c65a6447e3b9 378 SUPERFAMILY SSF102114 4 376 9.42E-105 T 29-03-2018 CHH28_RS06510 71c2024ce5ed20deb0a2c65a6447e3b9 378 SMART SM00729 5 221 1.6E-52 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CHH28_RS06510 71c2024ce5ed20deb0a2c65a6447e3b9 378 Pfam PF06969 HemN C-terminal domain 310 365 3.6E-10 T 29-03-2018 IPR010723 HemN, C-terminal CHH28_RS06510 71c2024ce5ed20deb0a2c65a6447e3b9 378 Gene3D G3DSA:3.20.20.70 4 302 9.5E-48 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS06510 71c2024ce5ed20deb0a2c65a6447e3b9 378 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 6 368 1.5E-118 T 29-03-2018 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 CHH28_RS06510 71c2024ce5ed20deb0a2c65a6447e3b9 378 Gene3D G3DSA:1.10.10.10 303 370 0.0014 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS06510 71c2024ce5ed20deb0a2c65a6447e3b9 378 Pfam PF04055 Radical SAM superfamily 10 177 2.3E-20 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CHH28_RS10500 646d2e258a4d550440a4e25d358de950 554 Gene3D G3DSA:3.30.300.30 442 554 2.0E-30 T 29-03-2018 CHH28_RS10500 646d2e258a4d550440a4e25d358de950 554 Gene3D G3DSA:3.40.50.980 204 355 2.8E-39 T 29-03-2018 CHH28_RS10500 646d2e258a4d550440a4e25d358de950 554 Pfam PF13193 AMP-binding enzyme C-terminal domain 456 534 8.5E-24 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CHH28_RS10500 646d2e258a4d550440a4e25d358de950 554 Gene3D G3DSA:3.40.50.980 32 203 2.1E-39 T 29-03-2018 CHH28_RS10500 646d2e258a4d550440a4e25d358de950 554 Pfam PF00501 AMP-binding enzyme 46 446 2.0E-74 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CHH28_RS10500 646d2e258a4d550440a4e25d358de950 554 SUPERFAMILY SSF56801 34 550 1.19E-136 T 29-03-2018 CHH28_RS10500 646d2e258a4d550440a4e25d358de950 554 Gene3D G3DSA:2.30.38.10 356 440 3.8E-11 T 29-03-2018 CHH28_RS18365 e6d912cf233af3fd42da77a9928d6e06 286 SUPERFAMILY SSF54637 47 165 4.27E-8 T 29-03-2018 IPR029069 HotDog domain CHH28_RS18365 e6d912cf233af3fd42da77a9928d6e06 286 Gene3D G3DSA:3.10.129.10 44 163 2.2E-21 T 29-03-2018 CHH28_RS18365 e6d912cf233af3fd42da77a9928d6e06 286 Gene3D G3DSA:3.10.129.10 164 284 3.6E-16 T 29-03-2018 CHH28_RS18365 e6d912cf233af3fd42da77a9928d6e06 286 PRINTS PR01483 Fatty acid synthase signature 206 227 5.2E-5 T 29-03-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 CHH28_RS18365 e6d912cf233af3fd42da77a9928d6e06 286 PRINTS PR01483 Fatty acid synthase signature 184 206 5.2E-5 T 29-03-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 CHH28_RS18365 e6d912cf233af3fd42da77a9928d6e06 286 SUPERFAMILY SSF54637 171 281 9.95E-21 T 29-03-2018 IPR029069 HotDog domain CHH28_RS18365 e6d912cf233af3fd42da77a9928d6e06 286 Pfam PF01575 MaoC like domain 175 274 9.7E-15 T 29-03-2018 IPR002539 MaoC-like domain CHH28_RS11970 77ae4be0afc43ac52779b2cb868c612a 434 Gene3D G3DSA:1.10.540.10 58 188 1.3E-22 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS11970 77ae4be0afc43ac52779b2cb868c612a 434 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 308 426 3.3E-27 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS11970 77ae4be0afc43ac52779b2cb868c612a 434 SUPERFAMILY SSF56645 71 294 5.76E-41 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CHH28_RS11970 77ae4be0afc43ac52779b2cb868c612a 434 Gene3D G3DSA:1.20.140.10 293 429 7.5E-34 T 29-03-2018 CHH28_RS11970 77ae4be0afc43ac52779b2cb868c612a 434 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 402 421 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CHH28_RS11970 77ae4be0afc43ac52779b2cb868c612a 434 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 76 185 1.3E-17 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS11970 77ae4be0afc43ac52779b2cb868c612a 434 Gene3D G3DSA:2.40.110.10 195 292 8.4E-16 T 29-03-2018 CHH28_RS11970 77ae4be0afc43ac52779b2cb868c612a 434 SUPERFAMILY SSF47203 303 426 1.21E-35 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS11970 77ae4be0afc43ac52779b2cb868c612a 434 PIRSF PIRSF016578 69 427 9.7E-14 T 29-03-2018 CHH28_RS16665 3d3a4dceef113aa3ab19f0d2ef1e80c0 210 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 200 5.1E-34 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CHH28_RS16665 3d3a4dceef113aa3ab19f0d2ef1e80c0 210 Pfam PF01914 MarC family integral membrane protein 6 203 4.3E-38 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CHH28_RS09580 2d3bb60c75b545315b6880b8286b7dde 314 Pfam PF02401 LytB protein 3 284 1.8E-94 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CHH28_RS09580 2d3bb60c75b545315b6880b8286b7dde 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 38.787 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CHH28_RS09580 2d3bb60c75b545315b6880b8286b7dde 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 2.4E-100 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CHH28_RS06685 42adba28cf067cdaaba73b13efc1ef71 229 Gene3D G3DSA:3.40.1050.10 1 226 9.2E-70 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CHH28_RS06685 42adba28cf067cdaaba73b13efc1ef71 229 SMART SM00947 27 198 2.1E-61 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CHH28_RS06685 42adba28cf067cdaaba73b13efc1ef71 229 SUPERFAMILY SSF53056 1 218 1.07E-64 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CHH28_RS06685 42adba28cf067cdaaba73b13efc1ef71 229 Pfam PF00484 Carbonic anhydrase 35 194 2.8E-50 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CHH28_RS06685 42adba28cf067cdaaba73b13efc1ef71 229 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CHH28_RS06685 42adba28cf067cdaaba73b13efc1ef71 229 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CHH28_RS07770 5ae6e463ef33818deb02d56bdeba74bd 338 Gene3D G3DSA:1.10.10.60 281 332 6.1E-10 T 29-03-2018 CHH28_RS07770 5ae6e463ef33818deb02d56bdeba74bd 338 Gene3D G3DSA:1.10.10.60 230 280 0.0067 T 29-03-2018 CHH28_RS07770 5ae6e463ef33818deb02d56bdeba74bd 338 SUPERFAMILY SSF46689 284 334 1.52E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS07770 5ae6e463ef33818deb02d56bdeba74bd 338 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 20 185 2.6E-25 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS07770 5ae6e463ef33818deb02d56bdeba74bd 338 SMART SM00342 248 330 6.2E-13 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS07770 5ae6e463ef33818deb02d56bdeba74bd 338 Pfam PF12833 Helix-turn-helix domain 254 331 8.1E-16 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS01990 b94adef60919dcb71d3332544fe29a07 436 Pfam PF02321 Outer membrane efflux protein 28 216 4.8E-20 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CHH28_RS01990 b94adef60919dcb71d3332544fe29a07 436 Pfam PF02321 Outer membrane efflux protein 239 420 5.8E-21 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CHH28_RS01990 b94adef60919dcb71d3332544fe29a07 436 SUPERFAMILY SSF56954 4 422 1.44E-68 T 29-03-2018 CHH28_RS01990 b94adef60919dcb71d3332544fe29a07 436 Gene3D G3DSA:1.20.1600.10 21 426 3.5E-54 T 29-03-2018 CHH28_RS09765 1917619ed4efccedc4348ddaf77606b1 562 Gene3D G3DSA:3.30.450.90 151 286 1.1E-48 T 29-03-2018 CHH28_RS09765 1917619ed4efccedc4348ddaf77606b1 562 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 7 562 5.7E-260 T 29-03-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 CHH28_RS09765 1917619ed4efccedc4348ddaf77606b1 562 SUPERFAMILY SSF160246 2 140 1.18E-32 T 29-03-2018 CHH28_RS09765 1917619ed4efccedc4348ddaf77606b1 562 SUPERFAMILY SSF52540 170 560 9.46E-101 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09765 1917619ed4efccedc4348ddaf77606b1 562 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 11 143 9.5E-17 T 29-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 CHH28_RS09765 1917619ed4efccedc4348ddaf77606b1 562 Pfam PF00437 Type II/IV secretion system protein 186 453 3.8E-89 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CHH28_RS09765 1917619ed4efccedc4348ddaf77606b1 562 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CHH28_RS09765 1917619ed4efccedc4348ddaf77606b1 562 Gene3D G3DSA:3.40.50.300 287 562 7.4E-61 T 29-03-2018 CHH28_RS03805 bb4603484399999ed2c36d1ebe34b199 454 PIRSF PIRSF006446 1 452 1.6E-166 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CHH28_RS03805 bb4603484399999ed2c36d1ebe34b199 454 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 428 5.1E-152 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CHH28_RS00645 2b324817eea3980418cf581e611e1900 158 Pfam PF00027 Cyclic nucleotide-binding domain 41 126 2.7E-21 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS00645 2b324817eea3980418cf581e611e1900 158 SMART SM00100 21 142 2.1E-16 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS00645 2b324817eea3980418cf581e611e1900 158 Gene3D G3DSA:2.60.120.10 3 156 1.8E-34 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS00645 2b324817eea3980418cf581e611e1900 158 SUPERFAMILY SSF51206 14 147 2.09E-32 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CHH28_RS02510 13b08098f8925535a81b53aa2b424082 134 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 108 1.3E-12 T 29-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CHH28_RS02510 13b08098f8925535a81b53aa2b424082 134 Gene3D G3DSA:3.90.1590.10 1 130 4.7E-22 T 29-03-2018 CHH28_RS02510 13b08098f8925535a81b53aa2b424082 134 SUPERFAMILY SSF51316 1 122 1.46E-30 T 29-03-2018 IPR011057 Mss4-like CHH28_RS11420 6ae9e2c8ae91673f2af3c17490322e1f 270 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 16 266 1.3E-77 T 29-03-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 CHH28_RS11420 6ae9e2c8ae91673f2af3c17490322e1f 270 Gene3D G3DSA:3.20.20.140 14 269 4.7E-80 T 29-03-2018 CHH28_RS11420 6ae9e2c8ae91673f2af3c17490322e1f 270 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 203 219 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CHH28_RS11420 6ae9e2c8ae91673f2af3c17490322e1f 270 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 137 147 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CHH28_RS11420 6ae9e2c8ae91673f2af3c17490322e1f 270 PIRSF PIRSF005902 1 269 2.1E-79 T 29-03-2018 IPR001130 TatD family GO:0016788 CHH28_RS11420 6ae9e2c8ae91673f2af3c17490322e1f 270 Pfam PF01026 TatD related DNase 18 266 2.1E-72 T 29-03-2018 IPR001130 TatD family GO:0016788 CHH28_RS11420 6ae9e2c8ae91673f2af3c17490322e1f 270 SUPERFAMILY SSF51556 16 267 5.64E-85 T 29-03-2018 IPR032466 Metal-dependent hydrolase CHH28_RS14365 9682c9ac33353861cccd82ca26b5cf9c 311 Pfam PF00850 Histone deacetylase domain 20 301 8.4E-74 T 29-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CHH28_RS14365 9682c9ac33353861cccd82ca26b5cf9c 311 Gene3D G3DSA:3.40.800.20 1 311 6.2E-92 T 29-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CHH28_RS14365 9682c9ac33353861cccd82ca26b5cf9c 311 PRINTS PR01270 Histone deacetylase superfamily signature 235 245 8.6E-15 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CHH28_RS14365 9682c9ac33353861cccd82ca26b5cf9c 311 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 8.6E-15 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CHH28_RS14365 9682c9ac33353861cccd82ca26b5cf9c 311 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 8.6E-15 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CHH28_RS14365 9682c9ac33353861cccd82ca26b5cf9c 311 SUPERFAMILY SSF52768 1 307 1.15E-92 T 29-03-2018 CHH28_RS09420 ad904c35d7be7d4e72d2dcc4f838b28c 342 Gene3D G3DSA:3.40.50.300 118 278 8.0E-21 T 29-03-2018 CHH28_RS09420 ad904c35d7be7d4e72d2dcc4f838b28c 342 Gene3D G3DSA:1.10.40.50 280 342 5.3E-21 T 29-03-2018 CHH28_RS09420 ad904c35d7be7d4e72d2dcc4f838b28c 342 SUPERFAMILY SSF52540 117 338 3.96E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09420 ad904c35d7be7d4e72d2dcc4f838b28c 342 Gene3D G3DSA:2.40.50.140 40 106 1.7E-16 T 29-03-2018 CHH28_RS09420 ad904c35d7be7d4e72d2dcc4f838b28c 342 Pfam PF03193 RsgA GTPase 104 279 2.9E-53 T 29-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 CHH28_RS09420 ad904c35d7be7d4e72d2dcc4f838b28c 342 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 45 342 35.952 T 29-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CHH28_RS09420 ad904c35d7be7d4e72d2dcc4f838b28c 342 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 79 336 9.6E-80 T 29-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CHH28_RS05415 7e5fee81bbe04c67c23b2125e55b5da4 58 Pfam PF13617 YnbE-like lipoprotein 5 56 2.5E-24 T 29-03-2018 IPR025985 YnbE-like lipoprotein CHH28_RS05415 7e5fee81bbe04c67c23b2125e55b5da4 58 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 9 45 2.0E-7 T 29-03-2018 CHH28_RS06220 8ac235b1ce2ba567897fbfadda80dc70 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 9.3E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS06220 8ac235b1ce2ba567897fbfadda80dc70 226 SMART SM00862 146 222 1.7E-16 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS06220 8ac235b1ce2ba567897fbfadda80dc70 226 Gene3D G3DSA:1.10.10.10 115 226 1.1E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS06220 8ac235b1ce2ba567897fbfadda80dc70 226 Gene3D G3DSA:3.40.50.2300 1 114 3.5E-34 T 29-03-2018 CHH28_RS06220 8ac235b1ce2ba567897fbfadda80dc70 226 SUPERFAMILY SSF52172 1 122 4.98E-37 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS06220 8ac235b1ce2ba567897fbfadda80dc70 226 SUPERFAMILY SSF46894 120 222 1.19E-25 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CHH28_RS06220 8ac235b1ce2ba567897fbfadda80dc70 226 SMART SM00448 1 111 6.1E-41 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS06220 8ac235b1ce2ba567897fbfadda80dc70 226 Pfam PF00072 Response regulator receiver domain 3 111 6.3E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS14750 dc3621f49385735e2629f124be2c725c 400 Pfam PF00589 Phage integrase family 198 380 4.9E-6 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CHH28_RS14750 dc3621f49385735e2629f124be2c725c 400 SUPERFAMILY SSF56349 42 87 2.33E-20 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CHH28_RS14750 dc3621f49385735e2629f124be2c725c 400 SUPERFAMILY SSF56349 133 383 2.33E-20 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CHH28_RS14750 dc3621f49385735e2629f124be2c725c 400 Gene3D G3DSA:1.10.443.10 183 384 4.6E-17 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CHH28_RS14750 dc3621f49385735e2629f124be2c725c 400 Gene3D G3DSA:1.10.150.130 23 164 6.3E-15 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CHH28_RS00125 62afc80410c42683cb28ba3c72c43186 218 Gene3D G3DSA:3.30.70.60 91 215 1.7E-6 T 29-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CHH28_RS00125 62afc80410c42683cb28ba3c72c43186 218 Gene3D G3DSA:1.20.5.340 39 78 0.021 T 29-03-2018 CHH28_RS13980 9e4ae1bf1e0b95619628494387b45252 147 Pfam PF00075 RNase H 6 142 6.3E-49 T 29-03-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CHH28_RS13980 9e4ae1bf1e0b95619628494387b45252 147 SUPERFAMILY SSF53098 4 143 1.15E-57 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS13980 9e4ae1bf1e0b95619628494387b45252 147 Gene3D G3DSA:3.30.420.10 1 146 4.3E-52 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS13980 9e4ae1bf1e0b95619628494387b45252 147 Hamap MF_00042 Ribonuclease H [rnhA]. 3 147 33.757 T 29-03-2018 IPR022892 Ribonuclease HI GO:0004523 CHH28_RS11060 4a57928f1e7100225a27c329f6f5e032 547 Gene3D G3DSA:2.60.40.380 45 138 2.0E-7 T 29-03-2018 CHH28_RS11060 4a57928f1e7100225a27c329f6f5e032 547 Pfam PF09423 PhoD-like phosphatase 145 494 1.5E-121 T 29-03-2018 IPR018946 Alkaline phosphatase D-related CHH28_RS11060 4a57928f1e7100225a27c329f6f5e032 547 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 46 134 4.5E-31 T 29-03-2018 IPR032093 Phospholipase D, N-terminal CHH28_RS11060 4a57928f1e7100225a27c329f6f5e032 547 Gene3D G3DSA:3.60.21.10 140 536 2.2E-45 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS11060 4a57928f1e7100225a27c329f6f5e032 547 SUPERFAMILY SSF56300 140 498 1.21E-29 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS12055 325046f078d73f9877c64d9a1685333e 294 Gene3D G3DSA:1.10.10.10 1 86 2.2E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS12055 325046f078d73f9877c64d9a1685333e 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.1E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS12055 325046f078d73f9877c64d9a1685333e 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.1E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS12055 325046f078d73f9877c64d9a1685333e 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.1E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS12055 325046f078d73f9877c64d9a1685333e 294 Pfam PF03466 LysR substrate binding domain 92 287 4.6E-14 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS12055 325046f078d73f9877c64d9a1685333e 294 Gene3D G3DSA:3.40.190.10 87 196 6.8E-9 T 29-03-2018 CHH28_RS12055 325046f078d73f9877c64d9a1685333e 294 SUPERFAMILY SSF53850 92 291 4.89E-20 T 29-03-2018 CHH28_RS12055 325046f078d73f9877c64d9a1685333e 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.3E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS12055 325046f078d73f9877c64d9a1685333e 294 Gene3D G3DSA:3.40.190.10 197 263 0.023 T 29-03-2018 CHH28_RS12055 325046f078d73f9877c64d9a1685333e 294 SUPERFAMILY SSF46785 1 84 1.13E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS09040 250cbd6ed4d49c3f58210e008abb1ffe 613 Pfam PF03055 Retinal pigment epithelial membrane protein 47 570 3.2E-19 T 29-03-2018 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 CHH28_RS11315 6b76f9f6261abcbff70fbc06f3186d8d 497 Hamap MF_00195 GTPase Der [der]. 2 454 37.378 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CHH28_RS11315 6b76f9f6261abcbff70fbc06f3186d8d 497 PIRSF PIRSF006485 1 459 6.9E-169 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CHH28_RS11315 6b76f9f6261abcbff70fbc06f3186d8d 497 Pfam PF01926 50S ribosome-binding GTPase 197 315 2.9E-22 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS11315 6b76f9f6261abcbff70fbc06f3186d8d 497 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.0E-25 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS11315 6b76f9f6261abcbff70fbc06f3186d8d 497 Gene3D G3DSA:1.20.120.430 262 385 1.9E-12 T 29-03-2018 CHH28_RS11315 6b76f9f6261abcbff70fbc06f3186d8d 497 SUPERFAMILY SSF52540 4 168 2.25E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11315 6b76f9f6261abcbff70fbc06f3186d8d 497 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 156 7.0E-18 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CHH28_RS11315 6b76f9f6261abcbff70fbc06f3186d8d 497 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 195 361 2.9E-20 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CHH28_RS11315 6b76f9f6261abcbff70fbc06f3186d8d 497 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 451 8.5E-172 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CHH28_RS11315 6b76f9f6261abcbff70fbc06f3186d8d 497 Gene3D G3DSA:3.30.300.20 386 452 8.6E-27 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CHH28_RS11315 6b76f9f6261abcbff70fbc06f3186d8d 497 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.9E-9 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS11315 6b76f9f6261abcbff70fbc06f3186d8d 497 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 5.9E-9 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS11315 6b76f9f6261abcbff70fbc06f3186d8d 497 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 372 451 3.8E-27 T 29-03-2018 IPR032859 GTPase Der, C-terminal KH-domain-like CHH28_RS11315 6b76f9f6261abcbff70fbc06f3186d8d 497 Gene3D G3DSA:1.20.120.430 70 261 3.0E-41 T 29-03-2018 CHH28_RS11315 6b76f9f6261abcbff70fbc06f3186d8d 497 Gene3D G3DSA:1.20.120.430 3 69 3.4E-15 T 29-03-2018 CHH28_RS11315 6b76f9f6261abcbff70fbc06f3186d8d 497 SUPERFAMILY SSF52540 137 162 4.66E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11315 6b76f9f6261abcbff70fbc06f3186d8d 497 SUPERFAMILY SSF52540 193 457 4.66E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS01005 3fd93bff205df93721ad2863d3f324ae 147 SUPERFAMILY SSF109604 3 129 5.96E-22 T 29-03-2018 CHH28_RS02975 ad0d178320ce9dbb73d9be3aabdf6f7d 331 SUPERFAMILY SSF56925 171 318 5.49E-16 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS02975 ad0d178320ce9dbb73d9be3aabdf6f7d 331 Gene3D G3DSA:2.40.160.20 66 330 5.7E-19 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS02975 ad0d178320ce9dbb73d9be3aabdf6f7d 331 Pfam PF13505 Outer membrane protein beta-barrel domain 172 331 2.3E-13 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel CHH28_RS13530 e6039f9cc315827f68e15379f9966c2a 748 SUPERFAMILY SSF141868 502 746 5.89E-90 T 29-03-2018 IPR001633 EAL domain CHH28_RS13530 e6039f9cc315827f68e15379f9966c2a 748 Gene3D G3DSA:3.30.70.270 337 496 1.3E-37 T 29-03-2018 CHH28_RS13530 e6039f9cc315827f68e15379f9966c2a 748 SMART SM00052 497 741 2.3E-118 T 29-03-2018 IPR001633 EAL domain CHH28_RS13530 e6039f9cc315827f68e15379f9966c2a 748 Pfam PF00563 EAL domain 504 736 5.1E-74 T 29-03-2018 IPR001633 EAL domain CHH28_RS13530 e6039f9cc315827f68e15379f9966c2a 748 Gene3D G3DSA:3.30.450.20 205 336 4.1E-12 T 29-03-2018 CHH28_RS13530 e6039f9cc315827f68e15379f9966c2a 748 SUPERFAMILY SSF55073 327 487 4.71E-29 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS13530 e6039f9cc315827f68e15379f9966c2a 748 Pfam PF00990 Diguanylate cyclase, GGDEF domain 322 481 3.6E-30 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS13530 e6039f9cc315827f68e15379f9966c2a 748 SMART SM00267 311 487 3.0E-32 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS13530 e6039f9cc315827f68e15379f9966c2a 748 Gene3D G3DSA:3.20.20.450 497 747 4.2E-98 T 29-03-2018 IPR001633 EAL domain CHH28_RS13530 e6039f9cc315827f68e15379f9966c2a 748 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 319 484 6.7E-18 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS16450 e8b4ff9f72eb28b23dbba85c06c00fa0 271 SUPERFAMILY SSF54534 126 224 7.85E-25 T 29-03-2018 CHH28_RS16450 e8b4ff9f72eb28b23dbba85c06c00fa0 271 Pfam PF13616 PPIC-type PPIASE domain 120 225 4.4E-25 T 29-03-2018 CHH28_RS16450 e8b4ff9f72eb28b23dbba85c06c00fa0 271 Gene3D G3DSA:3.10.50.40 115 251 4.4E-30 T 29-03-2018 CHH28_RS16450 e8b4ff9f72eb28b23dbba85c06c00fa0 271 SUPERFAMILY SSF109998 20 151 2.9E-8 T 29-03-2018 IPR027304 Trigger factor/SurA domain CHH28_RS16450 e8b4ff9f72eb28b23dbba85c06c00fa0 271 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 164 185 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CHH28_RS04220 2cafba8d7b19f8772cda6875337fa3bc 217 PIRSF PIRSF000709 19 214 3.5E-20 T 29-03-2018 CHH28_RS04220 2cafba8d7b19f8772cda6875337fa3bc 217 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 29 38 - T 29-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CHH28_RS04220 2cafba8d7b19f8772cda6875337fa3bc 217 SMART SM00855 26 182 7.3E-22 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CHH28_RS04220 2cafba8d7b19f8772cda6875337fa3bc 217 SUPERFAMILY SSF53254 27 212 4.36E-52 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CHH28_RS04220 2cafba8d7b19f8772cda6875337fa3bc 217 Gene3D G3DSA:3.40.50.1240 23 214 1.8E-52 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CHH28_RS04220 2cafba8d7b19f8772cda6875337fa3bc 217 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 27 210 3.9E-47 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CHH28_RS13970 d777ef3c14b639d19abcf10f498e5c61 514 SUPERFAMILY SSF54106 326 370 1.57E-10 T 29-03-2018 IPR018392 LysM domain CHH28_RS13970 d777ef3c14b639d19abcf10f498e5c61 514 SUPERFAMILY SSF54106 463 510 3.14E-9 T 29-03-2018 IPR018392 LysM domain CHH28_RS13970 d777ef3c14b639d19abcf10f498e5c61 514 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 116 144 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CHH28_RS13970 d777ef3c14b639d19abcf10f498e5c61 514 SUPERFAMILY SSF54106 403 448 9.55E-12 T 29-03-2018 IPR018392 LysM domain CHH28_RS13970 d777ef3c14b639d19abcf10f498e5c61 514 Gene3D G3DSA:3.10.350.10 462 511 1.5E-13 T 29-03-2018 CHH28_RS13970 d777ef3c14b639d19abcf10f498e5c61 514 SUPERFAMILY SSF53955 95 248 6.56E-40 T 29-03-2018 IPR023346 Lysozyme-like domain CHH28_RS13970 d777ef3c14b639d19abcf10f498e5c61 514 SMART SM00257 404 448 3.6E-13 T 29-03-2018 IPR018392 LysM domain CHH28_RS13970 d777ef3c14b639d19abcf10f498e5c61 514 SMART SM00257 327 370 1.8E-11 T 29-03-2018 IPR018392 LysM domain CHH28_RS13970 d777ef3c14b639d19abcf10f498e5c61 514 SMART SM00257 464 509 2.0E-8 T 29-03-2018 IPR018392 LysM domain CHH28_RS13970 d777ef3c14b639d19abcf10f498e5c61 514 Gene3D G3DSA:3.10.350.10 397 459 5.4E-17 T 29-03-2018 CHH28_RS13970 d777ef3c14b639d19abcf10f498e5c61 514 Pfam PF01464 Transglycosylase SLT domain 99 209 1.7E-21 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CHH28_RS13970 d777ef3c14b639d19abcf10f498e5c61 514 Pfam PF01476 LysM domain 465 507 2.9E-10 T 29-03-2018 IPR018392 LysM domain CHH28_RS13970 d777ef3c14b639d19abcf10f498e5c61 514 Pfam PF01476 LysM domain 328 370 2.1E-10 T 29-03-2018 IPR018392 LysM domain CHH28_RS13970 d777ef3c14b639d19abcf10f498e5c61 514 Pfam PF01476 LysM domain 405 448 2.0E-13 T 29-03-2018 IPR018392 LysM domain CHH28_RS13970 d777ef3c14b639d19abcf10f498e5c61 514 Gene3D G3DSA:1.10.530.10 28 241 3.0E-34 T 29-03-2018 CHH28_RS13970 d777ef3c14b639d19abcf10f498e5c61 514 Gene3D G3DSA:3.10.350.10 322 375 1.2E-12 T 29-03-2018 CHH28_RS09180 7af20817bd625417d47fd4ae419c50a4 405 Gene3D G3DSA:3.40.50.410 125 398 1.4E-24 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS09180 7af20817bd625417d47fd4ae419c50a4 405 SUPERFAMILY SSF53300 124 189 6.15E-16 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS09180 7af20817bd625417d47fd4ae419c50a4 405 SUPERFAMILY SSF53300 253 389 6.15E-16 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS11340 979fa834e5f5dd11f4dc1084c5e1f01f 330 SMART SM00342 240 323 3.1E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS11340 979fa834e5f5dd11f4dc1084c5e1f01f 330 Gene3D G3DSA:1.10.10.60 279 329 3.0E-14 T 29-03-2018 CHH28_RS11340 979fa834e5f5dd11f4dc1084c5e1f01f 330 SUPERFAMILY SSF52317 1 206 1.69E-40 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS11340 979fa834e5f5dd11f4dc1084c5e1f01f 330 Gene3D G3DSA:3.40.50.880 1 239 5.0E-50 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS11340 979fa834e5f5dd11f4dc1084c5e1f01f 330 SUPERFAMILY SSF46689 276 326 5.2E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS11340 979fa834e5f5dd11f4dc1084c5e1f01f 330 Pfam PF01965 DJ-1/PfpI family 43 185 3.6E-13 T 29-03-2018 IPR002818 DJ-1/PfpI CHH28_RS11340 979fa834e5f5dd11f4dc1084c5e1f01f 330 Gene3D G3DSA:1.10.10.60 240 278 3.3E-9 T 29-03-2018 CHH28_RS11340 979fa834e5f5dd11f4dc1084c5e1f01f 330 SUPERFAMILY SSF46689 223 274 1.49E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS11340 979fa834e5f5dd11f4dc1084c5e1f01f 330 Pfam PF12833 Helix-turn-helix domain 246 325 4.9E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS18590 d1c5447d26e3321d1b69133322c905cd 511 SMART SM00387 398 509 1.4E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18590 d1c5447d26e3321d1b69133322c905cd 511 Gene3D G3DSA:1.10.287.130 277 349 6.9E-11 T 29-03-2018 CHH28_RS18590 d1c5447d26e3321d1b69133322c905cd 511 Gene3D G3DSA:3.30.565.10 360 511 7.0E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18590 d1c5447d26e3321d1b69133322c905cd 511 SUPERFAMILY SSF47384 270 353 5.3E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS18590 d1c5447d26e3321d1b69133322c905cd 511 SMART SM00388 287 353 3.8E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS18590 d1c5447d26e3321d1b69133322c905cd 511 Pfam PF00512 His Kinase A (phospho-acceptor) domain 288 353 5.6E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS18590 d1c5447d26e3321d1b69133322c905cd 511 Pfam PF00672 HAMP domain 239 283 2.6E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS18590 d1c5447d26e3321d1b69133322c905cd 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 506 7.2E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18590 d1c5447d26e3321d1b69133322c905cd 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 447 7.2E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18590 d1c5447d26e3321d1b69133322c905cd 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 7.2E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18590 d1c5447d26e3321d1b69133322c905cd 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 461 7.2E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS18590 d1c5447d26e3321d1b69133322c905cd 511 SUPERFAMILY SSF158472 239 285 7.45E-7 T 29-03-2018 CHH28_RS18590 d1c5447d26e3321d1b69133322c905cd 511 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 506 1.1E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18590 d1c5447d26e3321d1b69133322c905cd 511 SUPERFAMILY SSF55874 342 508 2.1E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS18590 d1c5447d26e3321d1b69133322c905cd 511 SMART SM00304 234 286 9.5E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS04045 c140cb25adc36408c4275a470f58d3ca 380 SUPERFAMILY SSF55874 258 364 8.09E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS04045 c140cb25adc36408c4275a470f58d3ca 380 Pfam PF07730 Histidine kinase 187 252 1.3E-13 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CHH28_RS04045 c140cb25adc36408c4275a470f58d3ca 380 Gene3D G3DSA:3.30.565.10 152 377 5.7E-8 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS12145 87096e28dd0b9464a45c85f04f5d3cce 331 SUPERFAMILY SSF55781 11 152 3.05E-8 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS12145 87096e28dd0b9464a45c85f04f5d3cce 331 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 324 2.9E-38 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS12145 87096e28dd0b9464a45c85f04f5d3cce 331 Pfam PF04340 Protein of unknown function, DUF484 3 151 5.3E-8 T 29-03-2018 IPR007435 Protein of unknown function DUF484 CHH28_RS12145 87096e28dd0b9464a45c85f04f5d3cce 331 SUPERFAMILY SSF55073 169 327 3.06E-39 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS12145 87096e28dd0b9464a45c85f04f5d3cce 331 Gene3D G3DSA:3.30.450.40 2 159 3.6E-7 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS12145 87096e28dd0b9464a45c85f04f5d3cce 331 SMART SM00267 153 329 9.4E-49 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS12145 87096e28dd0b9464a45c85f04f5d3cce 331 Gene3D G3DSA:3.30.70.270 160 329 3.0E-45 T 29-03-2018 CHH28_RS12145 87096e28dd0b9464a45c85f04f5d3cce 331 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 162 324 1.7E-41 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS02490 5c7d298009aef0a8bc176e2468eff118 110 PRINTS PR00332 Histidine triad family signature 5 21 1.1E-19 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CHH28_RS02490 5c7d298009aef0a8bc176e2468eff118 110 PRINTS PR00332 Histidine triad family signature 92 102 1.1E-19 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CHH28_RS02490 5c7d298009aef0a8bc176e2468eff118 110 PRINTS PR00332 Histidine triad family signature 26 44 1.1E-19 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CHH28_RS02490 5c7d298009aef0a8bc176e2468eff118 110 Gene3D G3DSA:3.30.428.10 1 104 2.1E-32 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CHH28_RS02490 5c7d298009aef0a8bc176e2468eff118 110 ProSitePatterns PS00892 HIT domain signature. 85 103 - T 29-03-2018 IPR019808 Histidine triad, conserved site CHH28_RS02490 5c7d298009aef0a8bc176e2468eff118 110 SUPERFAMILY SSF54197 1 107 2.47E-36 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CHH28_RS02490 5c7d298009aef0a8bc176e2468eff118 110 Pfam PF01230 HIT domain 12 105 3.0E-25 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CHH28_RS10040 dcb4314ffc7c55eafa5f6a42d1c46ebc 397 SUPERFAMILY SSF51182 8 394 3.16E-87 T 29-03-2018 IPR011051 RmlC-like cupin domain CHH28_RS10040 dcb4314ffc7c55eafa5f6a42d1c46ebc 397 Pfam PF04209 homogentisate 1,2-dioxygenase 107 394 1.3E-23 T 29-03-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 CHH28_RS10040 dcb4314ffc7c55eafa5f6a42d1c46ebc 397 Gene3D G3DSA:2.60.120.10 235 372 1.5E-30 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS10040 dcb4314ffc7c55eafa5f6a42d1c46ebc 397 Gene3D G3DSA:2.60.120.10 66 234 4.2E-10 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS02670 0334304f65e1f2c24b9032fdc5959226 106 Gene3D G3DSA:3.40.630.30 4 106 1.2E-16 T 29-03-2018 CHH28_RS02670 0334304f65e1f2c24b9032fdc5959226 106 Pfam PF13302 Acetyltransferase (GNAT) domain 6 81 3.5E-19 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS02670 0334304f65e1f2c24b9032fdc5959226 106 SUPERFAMILY SSF55729 5 89 2.36E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS13960 d97e3f49892c2a533c2afff19dee4b57 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 2.7E-85 T 29-03-2018 CHH28_RS13960 d97e3f49892c2a533c2afff19dee4b57 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 3.5E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS13960 d97e3f49892c2a533c2afff19dee4b57 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.5E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS13960 d97e3f49892c2a533c2afff19dee4b57 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 3.5E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS13960 d97e3f49892c2a533c2afff19dee4b57 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 3.5E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS13960 d97e3f49892c2a533c2afff19dee4b57 264 Gene3D G3DSA:3.40.50.720 2 264 1.5E-41 T 29-03-2018 CHH28_RS13960 d97e3f49892c2a533c2afff19dee4b57 264 SUPERFAMILY SSF51735 6 252 1.9E-63 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS13960 d97e3f49892c2a533c2afff19dee4b57 264 PIRSF PIRSF000094 1 260 9.8E-111 T 29-03-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CHH28_RS11305 1f3d35e89999167d2d56ea83d29e95e9 220 SUPERFAMILY SSF48452 102 202 4.09E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS11305 1f3d35e89999167d2d56ea83d29e95e9 220 Pfam PF09976 Tetratricopeptide repeat-like domain 15 215 4.9E-52 T 29-03-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 CHH28_RS11305 1f3d35e89999167d2d56ea83d29e95e9 220 PIRSF PIRSF006170 1 219 8.3E-61 T 29-03-2018 IPR026039 Uncharacterised protein family UPF0070 CHH28_RS11305 1f3d35e89999167d2d56ea83d29e95e9 220 Gene3D G3DSA:1.25.40.10 68 219 1.9E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS12760 a7b821dcfbc4178efb0731fbaf3c5625 307 SUPERFAMILY SSF54637 171 302 2.47E-19 T 29-03-2018 IPR029069 HotDog domain CHH28_RS12760 a7b821dcfbc4178efb0731fbaf3c5625 307 SUPERFAMILY SSF54637 51 146 1.13E-15 T 29-03-2018 IPR029069 HotDog domain CHH28_RS12760 a7b821dcfbc4178efb0731fbaf3c5625 307 Pfam PF13622 Thioesterase-like superfamily 58 301 6.8E-43 T 29-03-2018 CHH28_RS12760 a7b821dcfbc4178efb0731fbaf3c5625 307 Gene3D G3DSA:3.10.129.10 174 301 7.1E-12 T 29-03-2018 CHH28_RS12760 a7b821dcfbc4178efb0731fbaf3c5625 307 Gene3D G3DSA:3.10.129.10 33 148 1.3E-14 T 29-03-2018 CHH28_RS04625 9d1c1d51d1fb8043abb30c8f5404f4bc 267 SUPERFAMILY SSF52540 18 254 1.82E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS04625 9d1c1d51d1fb8043abb30c8f5404f4bc 267 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 20 267 4.5E-121 T 29-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CHH28_RS04625 9d1c1d51d1fb8043abb30c8f5404f4bc 267 SMART SM00382 44 238 1.1E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS04625 9d1c1d51d1fb8043abb30c8f5404f4bc 267 Gene3D G3DSA:3.40.50.300 6 265 3.4E-58 T 29-03-2018 CHH28_RS04625 9d1c1d51d1fb8043abb30c8f5404f4bc 267 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS04625 9d1c1d51d1fb8043abb30c8f5404f4bc 267 Pfam PF00005 ABC transporter 37 191 5.5E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS15815 77226b544e070307aa58797c2614a039 483 SUPERFAMILY SSF53474 290 357 8.0E-10 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS15815 77226b544e070307aa58797c2614a039 483 SUPERFAMILY SSF53474 103 146 8.0E-10 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS15815 77226b544e070307aa58797c2614a039 483 SUPERFAMILY SSF53474 184 243 8.0E-10 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS15815 77226b544e070307aa58797c2614a039 483 Pfam PF10142 PhoPQ-activated pathogenicity-related protein 29 401 9.7E-92 T 29-03-2018 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type CHH28_RS15815 77226b544e070307aa58797c2614a039 483 Gene3D G3DSA:3.40.50.1820 76 358 7.9E-10 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS13110 927fb97a14420049457705917b68c799 373 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 9 370 1.5E-142 T 29-03-2018 IPR007434 Peptidogalycan biosysnthesis/recognition CHH28_RS13110 927fb97a14420049457705917b68c799 373 SUPERFAMILY SSF55729 174 341 7.75E-39 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS13110 927fb97a14420049457705917b68c799 373 Gene3D G3DSA:3.40.630.30 119 352 6.8E-40 T 29-03-2018 CHH28_RS14270 1bf185912bf937fb9561d5f85541f854 744 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 29-03-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CHH28_RS14270 1bf185912bf937fb9561d5f85541f854 744 Gene3D G3DSA:3.40.718.10 23 366 1.0E-41 T 29-03-2018 CHH28_RS14270 1bf185912bf937fb9561d5f85541f854 744 Gene3D G3DSA:3.40.718.10 421 713 8.8E-46 T 29-03-2018 CHH28_RS14270 1bf185912bf937fb9561d5f85541f854 744 SUPERFAMILY SSF53659 5 741 0.0 T 29-03-2018 CHH28_RS14270 1bf185912bf937fb9561d5f85541f854 744 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 743 0.0 T 29-03-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CHH28_RS14270 1bf185912bf937fb9561d5f85541f854 744 PIRSF PIRSF009407 1 743 0.0 T 29-03-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CHH28_RS08495 3bbcd4b6acd457ad6e41e1b4ec9121dc 385 Gene3D G3DSA:3.40.50.300 1 381 4.9E-23 T 29-03-2018 CHH28_RS08495 3bbcd4b6acd457ad6e41e1b4ec9121dc 385 SUPERFAMILY SSF52540 2 134 4.56E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS08495 3bbcd4b6acd457ad6e41e1b4ec9121dc 385 SUPERFAMILY SSF52540 223 354 4.56E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS08495 3bbcd4b6acd457ad6e41e1b4ec9121dc 385 Pfam PF13175 AAA ATPase domain 1 48 3.8E-8 T 29-03-2018 CHH28_RS08495 3bbcd4b6acd457ad6e41e1b4ec9121dc 385 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 221 347 1.2E-19 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CHH28_RS08495 3bbcd4b6acd457ad6e41e1b4ec9121dc 385 PIRSF PIRSF029347 1 385 1.6E-156 T 29-03-2018 IPR014555 RecF-like CHH28_RS14920 767adbe13737a5e9e61adfc58b61f408 1126 SUPERFAMILY SSF50249 40 124 6.0E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS14920 767adbe13737a5e9e61adfc58b61f408 1126 SMART SM00316 37 118 1.3E-12 T 29-03-2018 IPR022967 RNA-binding domain, S1 CHH28_RS14920 767adbe13737a5e9e61adfc58b61f408 1126 Gene3D G3DSA:2.40.50.140 32 123 1.2E-30 T 29-03-2018 CHH28_RS14920 767adbe13737a5e9e61adfc58b61f408 1126 Pfam PF00575 S1 RNA binding domain 36 117 1.2E-14 T 29-03-2018 IPR003029 S1 domain GO:0003676 CHH28_RS14920 767adbe13737a5e9e61adfc58b61f408 1126 Hamap MF_00970 Ribonuclease E [rne]. 1 1122 32.518 T 29-03-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 CHH28_RS14920 767adbe13737a5e9e61adfc58b61f408 1126 Pfam PF10150 Ribonuclease E/G family 120 389 3.8E-96 T 29-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CHH28_RS14920 767adbe13737a5e9e61adfc58b61f408 1126 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 423 1.2E-164 T 29-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CHH28_RS06410 2ad69ceb13e2b8a8a907338f9507c025 304 SUPERFAMILY SSF46785 13 119 4.18E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS06410 2ad69ceb13e2b8a8a907338f9507c025 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 70 7.1E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS06410 2ad69ceb13e2b8a8a907338f9507c025 304 Gene3D G3DSA:3.40.190.10 185 263 8.0E-17 T 29-03-2018 CHH28_RS06410 2ad69ceb13e2b8a8a907338f9507c025 304 Gene3D G3DSA:3.40.190.10 100 184 4.6E-9 T 29-03-2018 CHH28_RS06410 2ad69ceb13e2b8a8a907338f9507c025 304 SUPERFAMILY SSF53850 96 298 4.16E-34 T 29-03-2018 CHH28_RS06410 2ad69ceb13e2b8a8a907338f9507c025 304 Pfam PF03466 LysR substrate binding domain 95 295 7.1E-33 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS06410 2ad69ceb13e2b8a8a907338f9507c025 304 Gene3D G3DSA:1.10.10.10 5 91 2.5E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS15370 1bcf5147f624a02344580575d17b954d 285 Pfam PF12146 Serine aminopeptidase, S33 76 186 6.2E-18 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CHH28_RS15370 1bcf5147f624a02344580575d17b954d 285 Gene3D G3DSA:3.40.50.1820 33 279 2.1E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS15370 1bcf5147f624a02344580575d17b954d 285 SUPERFAMILY SSF53474 32 267 1.38E-39 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS04185 a95e21d45d164c9859ea714d2622c470 565 Pfam PF05960 Bacterial protein of unknown function (DUF885) 24 557 6.9E-60 T 29-03-2018 IPR010281 Protein of unknown function DUF885 CHH28_RS11010 0ec8f9f362e9eab6dc3eeb6643e8378d 159 SUPERFAMILY SSF52833 1 152 4.11E-35 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS11010 0ec8f9f362e9eab6dc3eeb6643e8378d 159 Gene3D G3DSA:3.40.30.10 1 158 5.3E-28 T 29-03-2018 CHH28_RS11010 0ec8f9f362e9eab6dc3eeb6643e8378d 159 Pfam PF08534 Redoxin 3 152 3.2E-39 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CHH28_RS09615 e9d3c12373d96bea03d406c9e40e408b 186 Pfam PF12019 Type II transport protein GspH 46 158 6.0E-13 T 29-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 CHH28_RS09615 e9d3c12373d96bea03d406c9e40e408b 186 Gene3D G3DSA:3.30.700.10 10 180 5.9E-5 T 29-03-2018 CHH28_RS09615 e9d3c12373d96bea03d406c9e40e408b 186 SUPERFAMILY SSF54523 9 133 1.18E-10 T 29-03-2018 CHH28_RS05015 06972af03d801dd2efbc8e289135ff4a 362 Gene3D G3DSA:3.90.1200.10 133 360 2.4E-28 T 29-03-2018 CHH28_RS05015 06972af03d801dd2efbc8e289135ff4a 362 SUPERFAMILY SSF56112 18 352 6.83E-56 T 29-03-2018 IPR011009 Protein kinase-like domain CHH28_RS05015 06972af03d801dd2efbc8e289135ff4a 362 Pfam PF01636 Phosphotransferase enzyme family 41 279 2.7E-43 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CHH28_RS05015 06972af03d801dd2efbc8e289135ff4a 362 Gene3D G3DSA:3.30.200.20 17 123 1.2E-24 T 29-03-2018 CHH28_RS14555 c908588b6c7e9c258bf4bfd9685b8536 740 SMART SM00487 144 334 1.4E-18 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CHH28_RS14555 c908588b6c7e9c258bf4bfd9685b8536 740 Pfam PF00176 SNF2 family N-terminal domain 160 353 1.4E-13 T 29-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CHH28_RS14555 c908588b6c7e9c258bf4bfd9685b8536 740 SMART SM00490 470 553 2.4E-10 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS14555 c908588b6c7e9c258bf4bfd9685b8536 740 SUPERFAMILY SSF52540 128 359 2.9E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS14555 c908588b6c7e9c258bf4bfd9685b8536 740 Gene3D G3DSA:3.40.50.300 433 652 9.7E-21 T 29-03-2018 CHH28_RS14555 c908588b6c7e9c258bf4bfd9685b8536 740 Pfam PF00271 Helicase conserved C-terminal domain 445 553 2.9E-13 T 29-03-2018 IPR001650 Helicase, C-terminal CHH28_RS14555 c908588b6c7e9c258bf4bfd9685b8536 740 Gene3D G3DSA:3.40.50.10810 115 368 1.3E-26 T 29-03-2018 CHH28_RS14555 c908588b6c7e9c258bf4bfd9685b8536 740 Pfam PF12137 RNA polymerase recycling family C-terminal 557 687 4.9E-30 T 29-03-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 CHH28_RS14555 c908588b6c7e9c258bf4bfd9685b8536 740 SUPERFAMILY SSF52540 432 591 4.93E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS14555 c908588b6c7e9c258bf4bfd9685b8536 740 SUPERFAMILY SSF52540 261 326 4.93E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09120 8f332498d58957f0205fd7d85a06b42f 2035 SUPERFAMILY SSF50939 435 490 5.3E-9 T 29-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CHH28_RS09120 8f332498d58957f0205fd7d85a06b42f 2035 SUPERFAMILY SSF50939 528 582 5.3E-9 T 29-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CHH28_RS09120 8f332498d58957f0205fd7d85a06b42f 2035 SUPERFAMILY SSF50939 296 403 5.3E-9 T 29-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CHH28_RS09120 8f332498d58957f0205fd7d85a06b42f 2035 Gene3D G3DSA:2.60.40.550 93 155 2.9E-4 T 29-03-2018 CHH28_RS09120 8f332498d58957f0205fd7d85a06b42f 2035 Gene3D G3DSA:2.60.40.10 617 791 0.2 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS09120 8f332498d58957f0205fd7d85a06b42f 2035 Gene3D G3DSA:2.60.40.10 792 968 0.24 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS09120 8f332498d58957f0205fd7d85a06b42f 2035 Gene3D G3DSA:2.60.40.10 969 1114 0.073 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS09120 8f332498d58957f0205fd7d85a06b42f 2035 Gene3D G3DSA:2.60.40.10 419 526 0.0017 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS09120 8f332498d58957f0205fd7d85a06b42f 2035 Pfam PF07603 Protein of unknown function (DUF1566) 1631 1733 9.1E-11 T 29-03-2018 IPR011460 Protein of unknown function DUF1566 CHH28_RS12420 5dd0a70076539a4e6c1b0040784ec357 188 SUPERFAMILY SSF89028 7 179 6.47E-59 T 29-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CHH28_RS12420 5dd0a70076539a4e6c1b0040784ec357 188 Gene3D G3DSA:1.20.1200.10 17 184 1.8E-62 T 29-03-2018 CHH28_RS12420 5dd0a70076539a4e6c1b0040784ec357 188 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 24 179 8.0E-42 T 29-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CHH28_RS12420 5dd0a70076539a4e6c1b0040784ec357 188 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 10 179 5.4E-59 T 29-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CHH28_RS12420 5dd0a70076539a4e6c1b0040784ec357 188 Pfam PF01923 Cobalamin adenosyltransferase 8 166 2.3E-59 T 29-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CHH28_RS06175 a6f103b97627f377101e9d6a3493adb1 1251 SMART SM00052 1006 1244 1.6E-8 T 29-03-2018 IPR001633 EAL domain CHH28_RS06175 a6f103b97627f377101e9d6a3493adb1 1251 SUPERFAMILY SSF55073 824 980 1.1E-29 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS06175 a6f103b97627f377101e9d6a3493adb1 1251 Pfam PF00563 EAL domain 1056 1239 2.3E-29 T 29-03-2018 IPR001633 EAL domain CHH28_RS06175 a6f103b97627f377101e9d6a3493adb1 1251 Gene3D G3DSA:3.20.20.450 1006 1242 1.5E-34 T 29-03-2018 IPR001633 EAL domain CHH28_RS06175 a6f103b97627f377101e9d6a3493adb1 1251 Gene3D G3DSA:2.40.10.220 2 130 1.7E-11 T 29-03-2018 CHH28_RS06175 a6f103b97627f377101e9d6a3493adb1 1251 Gene3D G3DSA:3.30.70.270 812 985 4.7E-37 T 29-03-2018 CHH28_RS06175 a6f103b97627f377101e9d6a3493adb1 1251 Pfam PF07793 Protein of unknown function (DUF1631) 120 809 2.0E-72 T 29-03-2018 IPR012434 Protein of unknown function DUF1631 CHH28_RS06175 a6f103b97627f377101e9d6a3493adb1 1251 SMART SM00267 808 978 5.7E-30 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS06175 a6f103b97627f377101e9d6a3493adb1 1251 Pfam PF00990 Diguanylate cyclase, GGDEF domain 819 972 6.9E-26 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS06175 a6f103b97627f377101e9d6a3493adb1 1251 SUPERFAMILY SSF141868 1052 1239 1.57E-29 T 29-03-2018 IPR001633 EAL domain CHH28_RS06175 a6f103b97627f377101e9d6a3493adb1 1251 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 816 976 1.7E-22 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS06175 a6f103b97627f377101e9d6a3493adb1 1251 SUPERFAMILY SSF141371 4 94 2.55E-9 T 29-03-2018 CHH28_RS03760 c1e9965b2f197f74726ecb2192255031 155 SUPERFAMILY SSF55729 6 152 5.85E-15 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS03760 c1e9965b2f197f74726ecb2192255031 155 Gene3D G3DSA:3.40.630.30 9 153 1.6E-13 T 29-03-2018 CHH28_RS03760 c1e9965b2f197f74726ecb2192255031 155 Pfam PF13673 Acetyltransferase (GNAT) domain 45 152 4.5E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS14535 96d482e354c19ed0304718c1439aed07 329 Pfam PF12510 Smoothelin cytoskeleton protein 5 44 1.2E-5 T 29-03-2018 IPR022189 Smoothelin CHH28_RS14535 96d482e354c19ed0304718c1439aed07 329 Gene3D G3DSA:1.10.443.10 116 323 1.7E-23 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CHH28_RS14535 96d482e354c19ed0304718c1439aed07 329 SUPERFAMILY SSF47823 23 114 2.35E-25 T 29-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CHH28_RS14535 96d482e354c19ed0304718c1439aed07 329 SUPERFAMILY SSF56349 113 313 1.97E-38 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CHH28_RS14535 96d482e354c19ed0304718c1439aed07 329 Pfam PF00589 Phage integrase family 141 303 1.6E-12 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CHH28_RS14535 96d482e354c19ed0304718c1439aed07 329 Gene3D G3DSA:1.10.150.130 17 115 2.1E-9 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CHH28_RS08585 ca1e3cf0d6262aeb5e341cf21009b674 482 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 419 1.3E-152 T 29-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CHH28_RS08585 ca1e3cf0d6262aeb5e341cf21009b674 482 SMART SM00316 37 110 3.5E-8 T 29-03-2018 IPR022967 RNA-binding domain, S1 CHH28_RS08585 ca1e3cf0d6262aeb5e341cf21009b674 482 SUPERFAMILY SSF50249 39 114 8.0E-20 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS08585 ca1e3cf0d6262aeb5e341cf21009b674 482 Pfam PF00575 S1 RNA binding domain 38 97 4.9E-7 T 29-03-2018 IPR003029 S1 domain GO:0003676 CHH28_RS08585 ca1e3cf0d6262aeb5e341cf21009b674 482 Gene3D G3DSA:2.40.50.140 32 115 7.8E-30 T 29-03-2018 CHH28_RS08585 ca1e3cf0d6262aeb5e341cf21009b674 482 Gene3D G3DSA:3.40.50.300 148 375 0.002 T 29-03-2018 CHH28_RS08585 ca1e3cf0d6262aeb5e341cf21009b674 482 Pfam PF10150 Ribonuclease E/G family 113 386 1.2E-100 T 29-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CHH28_RS12850 6961f646465739d8c17d147a2c4dad92 337 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 65 181 2.6E-11 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS14865 987783eadb8b16f84ae5a865f1cc17a2 278 Gene3D G3DSA:3.20.10.10 131 271 5.8E-25 T 29-03-2018 CHH28_RS14865 987783eadb8b16f84ae5a865f1cc17a2 278 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 19 260 8.9E-53 T 29-03-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 CHH28_RS14865 987783eadb8b16f84ae5a865f1cc17a2 278 Pfam PF01063 Amino-transferase class IV 27 248 1.4E-31 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CHH28_RS14865 987783eadb8b16f84ae5a865f1cc17a2 278 Gene3D G3DSA:3.30.470.10 11 122 1.2E-12 T 29-03-2018 CHH28_RS14865 987783eadb8b16f84ae5a865f1cc17a2 278 SUPERFAMILY SSF56752 18 265 2.49E-42 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CHH28_RS15125 626e130bf427ee19de380e4ac974249a 150 SUPERFAMILY SSF52218 1 142 1.31E-25 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS15125 626e130bf427ee19de380e4ac974249a 150 Gene3D G3DSA:3.40.50.360 1 149 1.8E-22 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS15125 626e130bf427ee19de380e4ac974249a 150 Pfam PF03358 NADPH-dependent FMN reductase 45 125 9.9E-9 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CHH28_RS09290 29a5c885ba9745c5bfc244cd18c54c1c 285 SUPERFAMILY SSF53474 11 260 4.46E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS09290 29a5c885ba9745c5bfc244cd18c54c1c 285 Pfam PF12697 Alpha/beta hydrolase family 15 255 4.1E-11 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS09290 29a5c885ba9745c5bfc244cd18c54c1c 285 Gene3D G3DSA:3.40.50.1820 4 275 6.6E-28 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS14335 37f6f2b455e24a09b1c6eb7998f0d63c 539 Gene3D G3DSA:1.10.287.950 205 306 2.2E-8 T 29-03-2018 CHH28_RS14335 37f6f2b455e24a09b1c6eb7998f0d63c 539 Gene3D G3DSA:1.10.287.950 307 509 6.9E-49 T 29-03-2018 CHH28_RS14335 37f6f2b455e24a09b1c6eb7998f0d63c 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 322 503 1.1E-44 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS14335 37f6f2b455e24a09b1c6eb7998f0d63c 539 SMART SM00283 277 538 1.3E-72 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS14335 37f6f2b455e24a09b1c6eb7998f0d63c 539 SUPERFAMILY SSF58104 231 539 3.66E-76 T 29-03-2018 CHH28_RS14335 37f6f2b455e24a09b1c6eb7998f0d63c 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 1.1E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS14335 37f6f2b455e24a09b1c6eb7998f0d63c 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 1.1E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS14335 37f6f2b455e24a09b1c6eb7998f0d63c 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 204 1.1E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS14335 37f6f2b455e24a09b1c6eb7998f0d63c 539 SMART SM00304 208 262 2.4E-4 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS15420 80772efb7c6e28794af7af62dbf433a7 243 Gene3D G3DSA:3.60.21.10 1 233 2.0E-21 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS15420 80772efb7c6e28794af7af62dbf433a7 243 SUPERFAMILY SSF56300 1 218 3.19E-30 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS15420 80772efb7c6e28794af7af62dbf433a7 243 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 222 5.6E-92 T 29-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CHH28_RS15420 80772efb7c6e28794af7af62dbf433a7 243 Pfam PF00149 Calcineurin-like phosphoesterase 4 198 5.6E-8 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CHH28_RS15420 80772efb7c6e28794af7af62dbf433a7 243 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 111.475 T 29-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CHH28_RS09150 91e66e51a3974e5b6f81118ddcf40a6e 467 Pfam PF00437 Type II/IV secretion system protein 120 395 5.3E-79 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CHH28_RS09150 91e66e51a3974e5b6f81118ddcf40a6e 467 Gene3D G3DSA:3.30.450.90 115 218 1.2E-37 T 29-03-2018 CHH28_RS09150 91e66e51a3974e5b6f81118ddcf40a6e 467 SMART SM00382 243 397 0.0023 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS09150 91e66e51a3974e5b6f81118ddcf40a6e 467 SUPERFAMILY SSF52540 101 423 1.02E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09150 91e66e51a3974e5b6f81118ddcf40a6e 467 Gene3D G3DSA:3.40.50.300 223 444 1.3E-16 T 29-03-2018 CHH28_RS13470 026c6848861738209165fed8d24c7708 64 Gene3D G3DSA:1.10.10.620 3 52 1.2E-15 T 29-03-2018 CHH28_RS13470 026c6848861738209165fed8d24c7708 64 Pfam PF04957 Ribosome modulation factor 1 52 6.1E-22 T 29-03-2018 IPR007040 Ribosome modulation factor CHH28_RS13470 026c6848861738209165fed8d24c7708 64 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 48 4.0E-7 T 29-03-2018 IPR007040 Ribosome modulation factor CHH28_RS19015 41333fc98b2a018ad930a6c3334e0304 309 Gene3D G3DSA:3.40.190.10 178 267 4.4E-17 T 29-03-2018 CHH28_RS19015 41333fc98b2a018ad930a6c3334e0304 309 Gene3D G3DSA:3.40.190.10 91 177 2.1E-9 T 29-03-2018 CHH28_RS19015 41333fc98b2a018ad930a6c3334e0304 309 SUPERFAMILY SSF46785 4 83 4.76E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS19015 41333fc98b2a018ad930a6c3334e0304 309 Pfam PF03466 LysR substrate binding domain 94 291 2.7E-26 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS19015 41333fc98b2a018ad930a6c3334e0304 309 SUPERFAMILY SSF53850 87 291 5.43E-40 T 29-03-2018 CHH28_RS19015 41333fc98b2a018ad930a6c3334e0304 309 Gene3D G3DSA:1.10.10.10 1 85 5.0E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS19015 41333fc98b2a018ad930a6c3334e0304 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 6.7E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS00080 34b92ea4201924684a7a724f33ff7bd3 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS00080 34b92ea4201924684a7a724f33ff7bd3 156 Gene3D G3DSA:3.30.700.10 7 154 4.0E-7 T 29-03-2018 CHH28_RS00080 34b92ea4201924684a7a724f33ff7bd3 156 Pfam PF12019 Type II transport protein GspH 43 147 1.2E-4 T 29-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 CHH28_RS00080 34b92ea4201924684a7a724f33ff7bd3 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 4.1E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS00080 34b92ea4201924684a7a724f33ff7bd3 156 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 26 6.3E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS00080 34b92ea4201924684a7a724f33ff7bd3 156 SUPERFAMILY SSF54523 7 127 4.16E-8 T 29-03-2018 CHH28_RS18220 e98a7b0bfe687baada0fe517fd4454de 387 Gene3D G3DSA:1.20.1250.20 1 183 1.3E-25 T 29-03-2018 CHH28_RS18220 e98a7b0bfe687baada0fe517fd4454de 387 Pfam PF07690 Major Facilitator Superfamily 4 332 3.3E-37 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CHH28_RS18220 e98a7b0bfe687baada0fe517fd4454de 387 SUPERFAMILY SSF103473 3 378 3.92E-45 T 29-03-2018 IPR020846 Major facilitator superfamily domain CHH28_RS18220 e98a7b0bfe687baada0fe517fd4454de 387 Gene3D G3DSA:1.20.1250.20 184 380 1.1E-12 T 29-03-2018 CHH28_RS11055 0aed0e68bc1902bde2e78e2a3ce5debc 348 Gene3D G3DSA:3.60.21.10 38 347 3.8E-44 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS11055 0aed0e68bc1902bde2e78e2a3ce5debc 348 Pfam PF00149 Calcineurin-like phosphoesterase 43 268 5.4E-16 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CHH28_RS11055 0aed0e68bc1902bde2e78e2a3ce5debc 348 SUPERFAMILY SSF56300 42 332 5.84E-49 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS17365 6fb70f0044402a1c00b51078d8decd88 116 Pfam PF15538 Bacterial toxin 46 53 116 5.4E-18 T 29-03-2018 IPR028238 Bacterial toxin 46 CHH28_RS10775 dacf9d09cf033d34b5f801a3c5b7729a 613 SUPERFAMILY SSF52540 353 605 2.71E-88 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS10775 dacf9d09cf033d34b5f801a3c5b7729a 613 Pfam PF00005 ABC transporter 382 535 1.1E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS10775 dacf9d09cf033d34b5f801a3c5b7729a 613 ProSitePatterns PS00211 ABC transporters family signature. 507 521 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS10775 dacf9d09cf033d34b5f801a3c5b7729a 613 Gene3D G3DSA:3.40.50.300 347 608 4.4E-75 T 29-03-2018 CHH28_RS10775 dacf9d09cf033d34b5f801a3c5b7729a 613 Gene3D G3DSA:1.20.1560.10 14 346 1.5E-38 T 29-03-2018 CHH28_RS10775 dacf9d09cf033d34b5f801a3c5b7729a 613 SUPERFAMILY SSF90123 21 344 3.92E-55 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS10775 dacf9d09cf033d34b5f801a3c5b7729a 613 SMART SM00382 390 581 1.6E-21 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS10775 dacf9d09cf033d34b5f801a3c5b7729a 613 Pfam PF00664 ABC transporter transmembrane region 40 309 1.2E-21 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS13730 04cc47f8903712239ac3cad23dc098fc 307 SUPERFAMILY SSF52540 22 284 1.74E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS13730 04cc47f8903712239ac3cad23dc098fc 307 PIRSF PIRSF002849 1 305 1.2E-113 T 29-03-2018 CHH28_RS13730 04cc47f8903712239ac3cad23dc098fc 307 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 169 3.6E-61 T 29-03-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 CHH28_RS13730 04cc47f8903712239ac3cad23dc098fc 307 Gene3D G3DSA:3.40.50.300 16 185 6.1E-25 T 29-03-2018 CHH28_RS13730 04cc47f8903712239ac3cad23dc098fc 307 Gene3D G3DSA:1.10.8.300 200 303 9.5E-24 T 29-03-2018 CHH28_RS14455 00480e1e7fa725a8ecd2b3e1a3cb26da 387 Gene3D G3DSA:2.115.10.20 105 373 6.8E-5 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CHH28_RS16335 795eabe9fc9f2b862ed9bc15f834eda5 290 Gene3D G3DSA:3.40.190.10 7 276 2.0E-5 T 29-03-2018 CHH28_RS06930 3238618a927eb6ab838d00a17037119e 173 SUPERFAMILY SSF55729 15 171 4.17E-18 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS06930 3238618a927eb6ab838d00a17037119e 173 Pfam PF13302 Acetyltransferase (GNAT) domain 15 146 6.1E-8 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS06930 3238618a927eb6ab838d00a17037119e 173 Gene3D G3DSA:3.40.630.30 4 173 6.1E-12 T 29-03-2018 CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 SUPERFAMILY SSF141868 482 728 3.92E-85 T 29-03-2018 IPR001633 EAL domain CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 SUPERFAMILY SSF55073 314 468 1.18E-44 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 Gene3D G3DSA:3.30.450.20 183 307 2.1E-21 T 29-03-2018 CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 Pfam PF00990 Diguanylate cyclase, GGDEF domain 309 461 1.0E-46 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 Pfam PF13185 GAF domain 33 176 2.2E-14 T 29-03-2018 IPR003018 GAF domain GO:0005515 CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 Gene3D G3DSA:3.30.450.40 13 182 1.6E-22 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 SMART SM00052 476 721 8.4E-106 T 29-03-2018 IPR001633 EAL domain CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 Gene3D G3DSA:3.30.70.270 308 473 1.4E-56 T 29-03-2018 CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 Gene3D G3DSA:3.20.20.450 474 729 6.3E-95 T 29-03-2018 IPR001633 EAL domain CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 Pfam PF00563 EAL domain 482 716 1.7E-71 T 29-03-2018 IPR001633 EAL domain CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 SUPERFAMILY SSF55785 197 305 6.81E-18 T 29-03-2018 IPR000014 PAS domain CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 SUPERFAMILY SSF55781 19 176 5.89E-25 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 SMART SM00091 185 251 1.7E-8 T 29-03-2018 IPR000014 PAS domain CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 308 464 7.4E-41 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 SMART SM00065 33 185 2.8E-13 T 29-03-2018 IPR003018 GAF domain GO:0005515 CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 190 304 5.5E-15 T 29-03-2018 IPR000014 PAS domain CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 Pfam PF13426 PAS domain 195 297 1.9E-13 T 29-03-2018 IPR000014 PAS domain CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 PIRSF PIRSF005925 181 303 5.8E-7 T 29-03-2018 IPR012226 Diguanylate cyclase/phosphodiesterase CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 PIRSF PIRSF005925 18 194 2.3E-32 T 29-03-2018 IPR012226 Diguanylate cyclase/phosphodiesterase CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 PIRSF PIRSF005925 296 730 7.3E-128 T 29-03-2018 IPR012226 Diguanylate cyclase/phosphodiesterase CHH28_RS16600 b95513a0c419090228d892ec79bbe8aa 730 SMART SM00267 298 466 2.1E-62 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS02305 7270cdc208ad681e8580c9fef3d6b56b 461 Gene3D G3DSA:1.10.405.10 128 212 1.7E-16 T 29-03-2018 CHH28_RS02305 7270cdc208ad681e8580c9fef3d6b56b 461 Gene3D G3DSA:3.50.50.60 11 95 1.2E-8 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS02305 7270cdc208ad681e8580c9fef3d6b56b 461 PRINTS PR00757 Flavin-containing amine oxidase signature 307 326 4.9E-16 T 29-03-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 CHH28_RS02305 7270cdc208ad681e8580c9fef3d6b56b 461 PRINTS PR00757 Flavin-containing amine oxidase signature 441 458 4.9E-16 T 29-03-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 CHH28_RS02305 7270cdc208ad681e8580c9fef3d6b56b 461 PRINTS PR00757 Flavin-containing amine oxidase signature 410 432 4.9E-16 T 29-03-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 CHH28_RS02305 7270cdc208ad681e8580c9fef3d6b56b 461 PRINTS PR00757 Flavin-containing amine oxidase signature 23 42 4.9E-16 T 29-03-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 CHH28_RS02305 7270cdc208ad681e8580c9fef3d6b56b 461 SUPERFAMILY SSF51905 423 460 4.53E-64 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS02305 7270cdc208ad681e8580c9fef3d6b56b 461 SUPERFAMILY SSF51905 21 322 4.53E-64 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS02305 7270cdc208ad681e8580c9fef3d6b56b 461 Pfam PF01593 Flavin containing amine oxidoreductase 31 459 3.5E-64 T 29-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CHH28_RS02305 7270cdc208ad681e8580c9fef3d6b56b 461 SUPERFAMILY SSF54373 303 410 7.85E-14 T 29-03-2018 CHH28_RS02305 7270cdc208ad681e8580c9fef3d6b56b 461 Gene3D G3DSA:3.90.660.10 213 415 2.1E-33 T 29-03-2018 CHH28_RS00140 ba25db9231a2330f8608b3c35fcb34fd 367 Gene3D G3DSA:2.130.10.10 270 367 0.0078 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS00140 ba25db9231a2330f8608b3c35fcb34fd 367 Pfam PF07995 Glucose / Sorbosone dehydrogenase 39 359 5.3E-99 T 29-03-2018 IPR012938 Glucose/Sorbosone dehydrogenase CHH28_RS00140 ba25db9231a2330f8608b3c35fcb34fd 367 Gene3D G3DSA:2.120.10.30 17 269 1.5E-41 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CHH28_RS00140 ba25db9231a2330f8608b3c35fcb34fd 367 SUPERFAMILY SSF50952 23 365 1.11E-35 T 29-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 CHH28_RS09015 7517c05b4d2dfb393b9158178446a3ac 248 Gene3D G3DSA:3.30.70.270 29 209 4.2E-54 T 29-03-2018 CHH28_RS09015 7517c05b4d2dfb393b9158178446a3ac 248 SMART SM00267 25 201 2.8E-55 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS09015 7517c05b4d2dfb393b9158178446a3ac 248 Pfam PF00990 Diguanylate cyclase, GGDEF domain 37 197 2.4E-47 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS09015 7517c05b4d2dfb393b9158178446a3ac 248 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 33 201 1.7E-54 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS09015 7517c05b4d2dfb393b9158178446a3ac 248 SUPERFAMILY SSF55073 41 203 1.18E-47 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS03155 4a139e94f178774f1ddf64f3dbd7ce38 587 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 62 162 1.7E-19 T 29-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 CHH28_RS03155 4a139e94f178774f1ddf64f3dbd7ce38 587 Pfam PF00437 Type II/IV secretion system protein 213 474 3.5E-77 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CHH28_RS03155 4a139e94f178774f1ddf64f3dbd7ce38 587 Gene3D G3DSA:3.40.50.300 311 586 4.5E-58 T 29-03-2018 CHH28_RS03155 4a139e94f178774f1ddf64f3dbd7ce38 587 SUPERFAMILY SSF52540 196 581 2.59E-98 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS03155 4a139e94f178774f1ddf64f3dbd7ce38 587 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 402 416 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CHH28_RS03155 4a139e94f178774f1ddf64f3dbd7ce38 587 SMART SM00382 335 456 6.8E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS03155 4a139e94f178774f1ddf64f3dbd7ce38 587 SUPERFAMILY SSF160246 10 155 9.42E-18 T 29-03-2018 CHH28_RS03155 4a139e94f178774f1ddf64f3dbd7ce38 587 Gene3D G3DSA:3.30.450.90 169 307 1.3E-43 T 29-03-2018 CHH28_RS00785 71725a058cc476616d6eeb6e429f1e6e 237 Gene3D G3DSA:3.90.1340.10 9 78 1.2E-17 T 29-03-2018 IPR011083 Phage tail collar domain CHH28_RS00785 71725a058cc476616d6eeb6e429f1e6e 237 Pfam PF07484 Phage Tail Collar Domain 31 86 5.0E-19 T 29-03-2018 IPR011083 Phage tail collar domain CHH28_RS00785 71725a058cc476616d6eeb6e429f1e6e 237 SUPERFAMILY SSF88874 212 231 2.88E-32 T 29-03-2018 CHH28_RS00785 71725a058cc476616d6eeb6e429f1e6e 237 SUPERFAMILY SSF88874 25 180 2.88E-32 T 29-03-2018 CHH28_RS00785 71725a058cc476616d6eeb6e429f1e6e 237 Gene3D G3DSA:4.10.1070.10 79 212 3.5E-4 T 29-03-2018 CHH28_RS03210 6fa0b791ae3f1cd6579ab83bbbf6e770 272 SUPERFAMILY SSF56300 12 263 2.43E-54 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS03210 6fa0b791ae3f1cd6579ab83bbbf6e770 272 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 203 258 1.0E-20 T 29-03-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 CHH28_RS03210 6fa0b791ae3f1cd6579ab83bbbf6e770 272 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 14 258 39.121 T 29-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 CHH28_RS03210 6fa0b791ae3f1cd6579ab83bbbf6e770 272 Pfam PF00149 Calcineurin-like phosphoesterase 14 203 1.2E-12 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CHH28_RS03210 6fa0b791ae3f1cd6579ab83bbbf6e770 272 Gene3D G3DSA:3.60.21.10 6 259 8.0E-37 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS16740 57cfc02f2ed32949608e975c544478cf 961 SUPERFAMILY SSF56935 388 454 2.75E-89 T 29-03-2018 CHH28_RS16740 57cfc02f2ed32949608e975c544478cf 961 SUPERFAMILY SSF56935 693 739 2.75E-89 T 29-03-2018 CHH28_RS16740 57cfc02f2ed32949608e975c544478cf 961 SUPERFAMILY SSF56935 28 228 2.75E-89 T 29-03-2018 CHH28_RS16740 57cfc02f2ed32949608e975c544478cf 961 SUPERFAMILY SSF56935 297 348 2.75E-89 T 29-03-2018 CHH28_RS16740 57cfc02f2ed32949608e975c544478cf 961 SUPERFAMILY SSF56935 481 628 2.75E-89 T 29-03-2018 CHH28_RS16740 57cfc02f2ed32949608e975c544478cf 961 SUPERFAMILY SSF56935 774 961 2.75E-89 T 29-03-2018 CHH28_RS16740 57cfc02f2ed32949608e975c544478cf 961 Gene3D G3DSA:2.170.130.10 28 169 3.5E-32 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS16740 57cfc02f2ed32949608e975c544478cf 961 Pfam PF00593 TonB dependent receptor 405 959 3.1E-33 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS16740 57cfc02f2ed32949608e975c544478cf 961 Gene3D G3DSA:2.40.170.20 170 961 4.1E-57 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS16740 57cfc02f2ed32949608e975c544478cf 961 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 168 1.3E-24 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS13445 e36e8a022fcd973ebb3e1775d29ef868 74 Pfam PF11197 Protein of unknown function (DUF2835) 5 72 5.7E-26 T 29-03-2018 IPR021363 Protein of unknown function DUF2835 CHH28_RS05600 3f05b1d1716bd4715f207a49013d0b4c 721 SUPERFAMILY SSF54001 363 547 3.22E-37 T 29-03-2018 CHH28_RS05600 3f05b1d1716bd4715f207a49013d0b4c 721 SMART SM00460 467 537 4.0E-18 T 29-03-2018 IPR002931 Transglutaminase-like CHH28_RS05600 3f05b1d1716bd4715f207a49013d0b4c 721 Gene3D G3DSA:3.90.260.10 416 547 2.0E-18 T 29-03-2018 IPR002931 Transglutaminase-like CHH28_RS05600 3f05b1d1716bd4715f207a49013d0b4c 721 Pfam PF01841 Transglutaminase-like superfamily 420 535 5.4E-26 T 29-03-2018 IPR002931 Transglutaminase-like CHH28_RS04380 f1e0d4b9621afa79a79f91668d7ae62a 549 Pfam PF02096 60Kd inner membrane protein 365 543 9.9E-61 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CHH28_RS04380 f1e0d4b9621afa79a79f91668d7ae62a 549 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 364 543 2.8E-71 T 29-03-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CHH28_RS04380 f1e0d4b9621afa79a79f91668d7ae62a 549 Pfam PF14849 YidC periplasmic domain 80 354 7.3E-86 T 29-03-2018 IPR028053 Membrane insertase YidC, N-terminal CHH28_RS04380 f1e0d4b9621afa79a79f91668d7ae62a 549 PRINTS PR01900 YidC translocation/secretion protein signature 350 366 1.4E-28 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CHH28_RS04380 f1e0d4b9621afa79a79f91668d7ae62a 549 PRINTS PR01900 YidC translocation/secretion protein signature 498 522 1.4E-28 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CHH28_RS04380 f1e0d4b9621afa79a79f91668d7ae62a 549 PRINTS PR01900 YidC translocation/secretion protein signature 479 494 1.4E-28 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CHH28_RS04380 f1e0d4b9621afa79a79f91668d7ae62a 549 PRINTS PR00701 60kDa inner membrane protein signature 426 449 1.9E-89 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CHH28_RS04380 f1e0d4b9621afa79a79f91668d7ae62a 549 PRINTS PR00701 60kDa inner membrane protein signature 473 495 1.9E-89 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CHH28_RS04380 f1e0d4b9621afa79a79f91668d7ae62a 549 PRINTS PR00701 60kDa inner membrane protein signature 509 532 1.9E-89 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CHH28_RS04380 f1e0d4b9621afa79a79f91668d7ae62a 549 PRINTS PR00701 60kDa inner membrane protein signature 85 106 1.9E-89 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CHH28_RS04380 f1e0d4b9621afa79a79f91668d7ae62a 549 PRINTS PR00701 60kDa inner membrane protein signature 230 248 1.9E-89 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CHH28_RS04380 f1e0d4b9621afa79a79f91668d7ae62a 549 PRINTS PR00701 60kDa inner membrane protein signature 263 278 1.9E-89 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CHH28_RS04380 f1e0d4b9621afa79a79f91668d7ae62a 549 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.9E-89 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CHH28_RS04380 f1e0d4b9621afa79a79f91668d7ae62a 549 PRINTS PR00701 60kDa inner membrane protein signature 174 194 1.9E-89 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CHH28_RS04380 f1e0d4b9621afa79a79f91668d7ae62a 549 PRINTS PR00701 60kDa inner membrane protein signature 335 355 1.9E-89 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CHH28_RS04380 f1e0d4b9621afa79a79f91668d7ae62a 549 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 363 4.3E-110 T 29-03-2018 IPR028053 Membrane insertase YidC, N-terminal CHH28_RS04380 f1e0d4b9621afa79a79f91668d7ae62a 549 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 545 25.077 T 29-03-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 CHH28_RS02115 ce81d1923750cb06c8e68c2a41378aff 399 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 19 385 2.0E-114 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CHH28_RS02115 ce81d1923750cb06c8e68c2a41378aff 399 Gene3D G3DSA:3.90.1150.10 255 396 5.1E-41 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS02115 ce81d1923750cb06c8e68c2a41378aff 399 SUPERFAMILY SSF53383 22 385 1.46E-99 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS02115 ce81d1923750cb06c8e68c2a41378aff 399 Gene3D G3DSA:3.40.640.10 3 253 3.0E-55 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS02115 ce81d1923750cb06c8e68c2a41378aff 399 PIRSF PIRSF001434 2 389 3.0E-116 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CHH28_RS05420 ff932a46a4029c340daf67e52ebff0d1 115 PRINTS PR00607 Class IE cytochrome C signature 59 69 7.7E-17 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CHH28_RS05420 ff932a46a4029c340daf67e52ebff0d1 115 PRINTS PR00607 Class IE cytochrome C signature 87 99 7.7E-17 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CHH28_RS05420 ff932a46a4029c340daf67e52ebff0d1 115 PRINTS PR00607 Class IE cytochrome C signature 48 59 7.7E-17 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CHH28_RS05420 ff932a46a4029c340daf67e52ebff0d1 115 PRINTS PR00607 Class IE cytochrome C signature 102 113 7.7E-17 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CHH28_RS05420 ff932a46a4029c340daf67e52ebff0d1 115 Gene3D G3DSA:1.10.760.10 36 115 3.0E-11 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS05420 ff932a46a4029c340daf67e52ebff0d1 115 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 38 112 3.8E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS05420 ff932a46a4029c340daf67e52ebff0d1 115 SUPERFAMILY SSF46626 38 113 9.16E-19 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS11710 f48cc0a185df1403e96fa27373763be0 205 Pfam PF01613 Flavin reductase like domain 22 165 1.4E-11 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CHH28_RS11710 f48cc0a185df1403e96fa27373763be0 205 SUPERFAMILY SSF50475 2 200 7.36E-32 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CHH28_RS11710 f48cc0a185df1403e96fa27373763be0 205 SMART SM00903 19 175 9.3E-7 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CHH28_RS11710 f48cc0a185df1403e96fa27373763be0 205 Gene3D G3DSA:2.30.110.10 13 194 9.0E-35 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CHH28_RS05780 067cd597f835517e175ecedb3d9833c7 157 SUPERFAMILY SSF48452 56 156 8.41E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS05780 067cd597f835517e175ecedb3d9833c7 157 SMART SM00028 90 123 13.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS05780 067cd597f835517e175ecedb3d9833c7 157 SMART SM00028 56 89 0.23 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS05780 067cd597f835517e175ecedb3d9833c7 157 Gene3D G3DSA:1.25.40.10 12 157 6.7E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS06600 b4311c20aafd3b104f56bf505ba405ec 215 Pfam PF00753 Metallo-beta-lactamase superfamily 11 194 2.2E-30 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS06600 b4311c20aafd3b104f56bf505ba405ec 215 Gene3D G3DSA:3.60.15.10 2 214 2.9E-42 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS06600 b4311c20aafd3b104f56bf505ba405ec 215 SMART SM00849 14 194 4.7E-42 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS06600 b4311c20aafd3b104f56bf505ba405ec 215 SUPERFAMILY SSF56281 4 210 3.38E-56 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS02150 9fe7e4b47bf4efae25184e7bd8e47998 392 SUPERFAMILY SSF103473 6 381 4.19E-28 T 29-03-2018 IPR020846 Major facilitator superfamily domain CHH28_RS02150 9fe7e4b47bf4efae25184e7bd8e47998 392 Gene3D G3DSA:1.20.1250.20 198 391 7.5E-10 T 29-03-2018 CHH28_RS02150 9fe7e4b47bf4efae25184e7bd8e47998 392 Pfam PF07690 Major Facilitator Superfamily 8 307 4.6E-12 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CHH28_RS02150 9fe7e4b47bf4efae25184e7bd8e47998 392 Gene3D G3DSA:1.20.1250.20 3 195 3.0E-16 T 29-03-2018 CHH28_RS00070 f1cfdc6679ffcc4242c0fd639410e266 260 SUPERFAMILY SSF54523 5 81 2.67E-7 T 29-03-2018 CHH28_RS00070 f1cfdc6679ffcc4242c0fd639410e266 260 Gene3D G3DSA:3.30.700.10 5 258 1.0E-7 T 29-03-2018 CHH28_RS00070 f1cfdc6679ffcc4242c0fd639410e266 260 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS00070 f1cfdc6679ffcc4242c0fd639410e266 260 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 24 1.8E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS00070 f1cfdc6679ffcc4242c0fd639410e266 260 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 23 4.6E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS15805 bc084c69e073679b092dd2896a760921 408 Gene3D G3DSA:1.20.1250.20 206 397 3.0E-26 T 29-03-2018 CHH28_RS15805 bc084c69e073679b092dd2896a760921 408 Gene3D G3DSA:1.20.1250.20 5 204 4.9E-11 T 29-03-2018 CHH28_RS15805 bc084c69e073679b092dd2896a760921 408 Pfam PF07690 Major Facilitator Superfamily 35 354 2.1E-24 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CHH28_RS15805 bc084c69e073679b092dd2896a760921 408 SUPERFAMILY SSF103473 19 397 2.22E-43 T 29-03-2018 IPR020846 Major facilitator superfamily domain CHH28_RS17525 d0d550aaff9e17591439d3805bdaae1c 224 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 14 201 2.0E-73 T 29-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CHH28_RS17525 d0d550aaff9e17591439d3805bdaae1c 224 SUPERFAMILY SSF53328 14 208 1.31E-63 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CHH28_RS17525 d0d550aaff9e17591439d3805bdaae1c 224 Pfam PF00551 Formyl transferase 14 192 3.7E-61 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CHH28_RS17525 d0d550aaff9e17591439d3805bdaae1c 224 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 145 168 - T 29-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CHH28_RS17525 d0d550aaff9e17591439d3805bdaae1c 224 Gene3D G3DSA:3.40.50.170 1 214 1.4E-68 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CHH28_RS17525 d0d550aaff9e17591439d3805bdaae1c 224 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 14 199 30.693 T 29-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CHH28_RS02275 ec0766d2a062e17b14b5959003fc7f5a 159 Pfam PF13673 Acetyltransferase (GNAT) domain 36 141 6.1E-17 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS02275 ec0766d2a062e17b14b5959003fc7f5a 159 Gene3D G3DSA:3.40.630.30 91 142 3.5E-13 T 29-03-2018 CHH28_RS02275 ec0766d2a062e17b14b5959003fc7f5a 159 Gene3D G3DSA:3.40.630.30 1 90 1.2E-12 T 29-03-2018 CHH28_RS02275 ec0766d2a062e17b14b5959003fc7f5a 159 SUPERFAMILY SSF55729 7 155 9.19E-29 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS09065 9c477c5e00b88dd443f6b9c7c1260394 322 Pfam PF02625 XdhC and CoxI family 15 75 2.2E-16 T 29-03-2018 IPR003777 XdhC- CoxI CHH28_RS09065 9c477c5e00b88dd443f6b9c7c1260394 322 Gene3D G3DSA:3.40.50.720 3 159 0.28 T 29-03-2018 CHH28_RS09065 9c477c5e00b88dd443f6b9c7c1260394 322 Gene3D G3DSA:3.40.50.720 161 319 5.0E-6 T 29-03-2018 CHH28_RS09065 9c477c5e00b88dd443f6b9c7c1260394 322 Pfam PF13478 XdhC Rossmann domain 164 304 9.8E-35 T 29-03-2018 IPR027051 XdhC Rossmann domain CHH28_RS19255 6de3f34a16b277afb77065fe964fc46a 137 Gene3D G3DSA:3.40.250.10 26 137 1.7E-26 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS19255 6de3f34a16b277afb77065fe964fc46a 137 Pfam PF00581 Rhodanese-like domain 41 128 3.8E-14 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS19255 6de3f34a16b277afb77065fe964fc46a 137 SUPERFAMILY SSF52821 13 136 1.83E-32 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS19255 6de3f34a16b277afb77065fe964fc46a 137 SMART SM00450 37 133 3.1E-24 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS11270 63b51f5a384a43d3daa673037afb89cc 161 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 29-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CHH28_RS11270 63b51f5a384a43d3daa673037afb89cc 161 Gene3D G3DSA:1.10.10.10 1 143 1.2E-32 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS11270 63b51f5a384a43d3daa673037afb89cc 161 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 1.6E-46 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CHH28_RS11270 63b51f5a384a43d3daa673037afb89cc 161 Pfam PF02082 Transcriptional regulator 1 83 2.0E-28 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CHH28_RS11270 63b51f5a384a43d3daa673037afb89cc 161 SUPERFAMILY SSF46785 2 133 8.0E-36 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS11270 63b51f5a384a43d3daa673037afb89cc 161 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 5.5E-65 T 29-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 CHH28_RS00790 c4c4c0dc645755085629e0a3bbf63f7a 275 Pfam PF14252 Domain of unknown function (DUF4347) 8 152 2.7E-30 T 29-03-2018 IPR025592 Domain of unknown function DUF4347 CHH28_RS06565 87ae8e63192efb9d16edfe12340c1d65 374 Pfam PF01435 Peptidase family M48 182 363 6.4E-22 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CHH28_RS06565 87ae8e63192efb9d16edfe12340c1d65 374 Gene3D G3DSA:3.30.2010.10 173 265 4.0E-15 T 29-03-2018 CHH28_RS07455 d7d18a3bd247ef91fed65dffe1e07699 240 SUPERFAMILY SSF63380 1 89 1.45E-21 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CHH28_RS07455 d7d18a3bd247ef91fed65dffe1e07699 240 SUPERFAMILY SSF63380 94 201 7.4E-25 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CHH28_RS07455 d7d18a3bd247ef91fed65dffe1e07699 240 Pfam PF00677 Lumazine binding domain 3 88 1.4E-18 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS07455 d7d18a3bd247ef91fed65dffe1e07699 240 Pfam PF00677 Lumazine binding domain 101 186 1.6E-18 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS07455 d7d18a3bd247ef91fed65dffe1e07699 240 Gene3D G3DSA:2.40.30.20 95 195 8.1E-23 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS07455 d7d18a3bd247ef91fed65dffe1e07699 240 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 2.2E-54 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS07455 d7d18a3bd247ef91fed65dffe1e07699 240 Gene3D G3DSA:2.40.30.20 1 93 2.4E-23 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS07455 d7d18a3bd247ef91fed65dffe1e07699 240 PIRSF PIRSF000498 1 210 1.6E-56 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS03070 886c25b97b0755e000cecf57b1eed6b2 76 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 17.135 T 29-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS03070 886c25b97b0755e000cecf57b1eed6b2 76 Pfam PF01192 RNA polymerase Rpb6 8 60 8.3E-17 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CHH28_RS03070 886c25b97b0755e000cecf57b1eed6b2 76 Gene3D G3DSA:3.90.940.10 1 75 3.4E-25 T 29-03-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CHH28_RS03070 886c25b97b0755e000cecf57b1eed6b2 76 SMART SM01409 8 61 5.4E-17 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CHH28_RS03070 886c25b97b0755e000cecf57b1eed6b2 76 SUPERFAMILY SSF63562 1 70 9.55E-24 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CHH28_RS03070 886c25b97b0755e000cecf57b1eed6b2 76 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.1E-24 T 29-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CHH28_RS16560 2c45c797644d7b86702192a834e3bf4c 481 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 15 472 6.3E-193 T 29-03-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 CHH28_RS16560 2c45c797644d7b86702192a834e3bf4c 481 Pfam PF01458 Uncharacterized protein family (UPF0051) 220 452 5.9E-67 T 29-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 CHH28_RS16560 2c45c797644d7b86702192a834e3bf4c 481 SUPERFAMILY SSF101960 108 478 3.79E-139 T 29-03-2018 CHH28_RS16560 2c45c797644d7b86702192a834e3bf4c 481 SUPERFAMILY SSF101960 37 81 3.79E-139 T 29-03-2018 CHH28_RS11360 743591615ce5355ecc30b070f44ed0bb 658 Pfam PF14864 Alkyl sulfatase C-terminal 539 657 1.8E-23 T 29-03-2018 IPR029229 Alkyl sulfatase, C-terminal CHH28_RS11360 743591615ce5355ecc30b070f44ed0bb 658 Gene3D G3DSA:3.30.1050.10 529 657 5.6E-21 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CHH28_RS11360 743591615ce5355ecc30b070f44ed0bb 658 SUPERFAMILY SSF56281 34 526 2.66E-137 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS11360 743591615ce5355ecc30b070f44ed0bb 658 Pfam PF14863 Alkyl sulfatase dimerisation 387 525 2.6E-59 T 29-03-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 CHH28_RS11360 743591615ce5355ecc30b070f44ed0bb 658 SUPERFAMILY SSF55718 539 657 7.95E-25 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CHH28_RS11360 743591615ce5355ecc30b070f44ed0bb 658 Pfam PF00753 Metallo-beta-lactamase superfamily 127 341 9.8E-27 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS11360 743591615ce5355ecc30b070f44ed0bb 658 Gene3D G3DSA:3.60.15.10 94 396 6.5E-24 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS11360 743591615ce5355ecc30b070f44ed0bb 658 SMART SM00849 130 351 6.1E-18 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS02570 98959744d2a04d062d67cbb426aad01f 218 Gene3D G3DSA:3.90.870.10 5 218 1.1E-87 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CHH28_RS02570 98959744d2a04d062d67cbb426aad01f 218 SUPERFAMILY SSF55821 9 213 1.83E-81 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CHH28_RS02570 98959744d2a04d062d67cbb426aad01f 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 3.6E-76 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS02570 98959744d2a04d062d67cbb426aad01f 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 41.74 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS02570 98959744d2a04d062d67cbb426aad01f 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 8.9E-79 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS05090 94c018567a2b91d5818192da70c621c8 232 Gene3D G3DSA:3.40.50.300 1 232 1.4E-53 T 29-03-2018 CHH28_RS05090 94c018567a2b91d5818192da70c621c8 232 SMART SM00382 26 210 8.7E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS05090 94c018567a2b91d5818192da70c621c8 232 SUPERFAMILY SSF52540 2 224 3.09E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS05090 94c018567a2b91d5818192da70c621c8 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 229 1.7E-100 T 29-03-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE CHH28_RS05090 94c018567a2b91d5818192da70c621c8 232 Pfam PF00005 ABC transporter 18 160 2.2E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS09820 ea590fe4ab5298ff559f97c3e99f802d 937 SMART SM01276 486 796 6.4E-11 T 29-03-2018 IPR031161 Peptidase family M60 domain CHH28_RS09820 ea590fe4ab5298ff559f97c3e99f802d 937 Gene3D G3DSA:3.40.50.880 132 227 2.9E-6 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS00240 71402901061764f05cc82b1e8b8d3fa1 511 SUPERFAMILY SSF56317 214 484 2.75E-45 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CHH28_RS00240 71402901061764f05cc82b1e8b8d3fa1 511 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 452 9.9E-93 T 29-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CHH28_RS00240 71402901061764f05cc82b1e8b8d3fa1 511 Pfam PF00795 Carbon-nitrogen hydrolase 218 467 6.5E-31 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CHH28_RS00240 71402901061764f05cc82b1e8b8d3fa1 511 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 9 489 22.154 T 29-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CHH28_RS00240 71402901061764f05cc82b1e8b8d3fa1 511 Gene3D G3DSA:3.60.110.10 213 475 1.0E-41 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CHH28_RS02830 e4d4147b08f40a298b3a8d0b513d74ce 720 Gene3D G3DSA:3.40.50.1820 293 718 2.7E-68 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS02830 e4d4147b08f40a298b3a8d0b513d74ce 720 Gene3D G3DSA:3.40.50.1820 41 201 2.7E-26 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS02830 e4d4147b08f40a298b3a8d0b513d74ce 720 SUPERFAMILY SSF53474 455 710 1.88E-51 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS02830 e4d4147b08f40a298b3a8d0b513d74ce 720 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 645 667 1.4E-61 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CHH28_RS02830 e4d4147b08f40a298b3a8d0b513d74ce 720 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 512 536 1.4E-61 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CHH28_RS02830 e4d4147b08f40a298b3a8d0b513d74ce 720 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 540 559 1.4E-61 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CHH28_RS02830 e4d4147b08f40a298b3a8d0b513d74ce 720 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 626 641 1.4E-61 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CHH28_RS02830 e4d4147b08f40a298b3a8d0b513d74ce 720 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 486 504 1.4E-61 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CHH28_RS02830 e4d4147b08f40a298b3a8d0b513d74ce 720 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 570 590 1.4E-61 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CHH28_RS02830 e4d4147b08f40a298b3a8d0b513d74ce 720 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 44 444 1.8E-131 T 29-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 CHH28_RS02830 e4d4147b08f40a298b3a8d0b513d74ce 720 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 547 577 - T 29-03-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 CHH28_RS02830 e4d4147b08f40a298b3a8d0b513d74ce 720 Pfam PF00326 Prolyl oligopeptidase family 502 716 3.8E-69 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CHH28_RS02830 e4d4147b08f40a298b3a8d0b513d74ce 720 SUPERFAMILY SSF50993 39 451 9.94E-102 T 29-03-2018 CHH28_RS19520 eecd6d77a8f6ade40f0c381730c8f693 198 Pfam PF09335 SNARE associated Golgi protein 41 160 4.9E-16 T 29-03-2018 IPR032816 SNARE associated Golgi protein CHH28_RS14065 a6c8b4b60f2070e4ce8d524559366055 330 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 4 323 1.2E-123 T 29-03-2018 IPR014188 Acrylyl-CoA reductase AcuI CHH28_RS14065 a6c8b4b60f2070e4ce8d524559366055 330 SMART SM00829 17 325 4.6E-7 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CHH28_RS14065 a6c8b4b60f2070e4ce8d524559366055 330 SUPERFAMILY SSF50129 3 146 6.13E-40 T 29-03-2018 IPR011032 GroES-like CHH28_RS14065 a6c8b4b60f2070e4ce8d524559366055 330 SUPERFAMILY SSF51735 118 281 6.83E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS14065 a6c8b4b60f2070e4ce8d524559366055 330 Pfam PF00107 Zinc-binding dehydrogenase 160 273 9.4E-16 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CHH28_RS14065 a6c8b4b60f2070e4ce8d524559366055 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 87 8.7E-5 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CHH28_RS14065 a6c8b4b60f2070e4ce8d524559366055 330 Gene3D G3DSA:3.90.180.10 4 160 2.7E-34 T 29-03-2018 CHH28_RS14065 a6c8b4b60f2070e4ce8d524559366055 330 Gene3D G3DSA:3.40.50.720 161 256 3.8E-15 T 29-03-2018 CHH28_RS06905 6798e11553db6808a3bc0d45450548b0 76 Gene3D G3DSA:4.10.640.10 1 76 2.1E-30 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06905 6798e11553db6808a3bc0d45450548b0 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.4E-17 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06905 6798e11553db6808a3bc0d45450548b0 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.4E-17 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06905 6798e11553db6808a3bc0d45450548b0 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.4E-17 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06905 6798e11553db6808a3bc0d45450548b0 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.4E-17 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06905 6798e11553db6808a3bc0d45450548b0 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 4.8E-37 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06905 6798e11553db6808a3bc0d45450548b0 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.962 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06905 6798e11553db6808a3bc0d45450548b0 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 4.0E-22 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06905 6798e11553db6808a3bc0d45450548b0 76 SUPERFAMILY SSF46911 3 74 3.92E-29 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06905 6798e11553db6808a3bc0d45450548b0 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 29-03-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06905 6798e11553db6808a3bc0d45450548b0 76 Pfam PF01084 Ribosomal protein S18 19 68 1.0E-24 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS11180 12aa1bcdf3b2be14b772ec802faf1561 436 Gene3D G3DSA:3.40.50.150 75 432 3.0E-49 T 29-03-2018 CHH28_RS11180 12aa1bcdf3b2be14b772ec802faf1561 436 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 365 395 - T 29-03-2018 IPR030390 RNA methyltransferase TrmA, active site CHH28_RS11180 12aa1bcdf3b2be14b772ec802faf1561 436 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 416 426 - T 29-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site CHH28_RS11180 12aa1bcdf3b2be14b772ec802faf1561 436 SUPERFAMILY SSF53335 68 433 1.64E-74 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS11180 12aa1bcdf3b2be14b772ec802faf1561 436 SUPERFAMILY SSF50249 9 66 1.83E-11 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS11180 12aa1bcdf3b2be14b772ec802faf1561 436 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 89 433 9.1E-26 T 29-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CHH28_RS11180 12aa1bcdf3b2be14b772ec802faf1561 436 Gene3D G3DSA:2.40.50.140 2 74 3.9E-22 T 29-03-2018 CHH28_RS10165 502600188e7b14693ee0ace52fb20a8b 509 SMART SM00098 74 509 4.1E-116 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS10165 502600188e7b14693ee0ace52fb20a8b 509 Pfam PF00245 Alkaline phosphatase 73 507 1.1E-108 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS10165 502600188e7b14693ee0ace52fb20a8b 509 PRINTS PR00113 Alkaline phosphatase signature 316 345 2.0E-33 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS10165 502600188e7b14693ee0ace52fb20a8b 509 PRINTS PR00113 Alkaline phosphatase signature 73 93 2.0E-33 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS10165 502600188e7b14693ee0ace52fb20a8b 509 PRINTS PR00113 Alkaline phosphatase signature 239 249 2.0E-33 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS10165 502600188e7b14693ee0ace52fb20a8b 509 PRINTS PR00113 Alkaline phosphatase signature 129 144 2.0E-33 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS10165 502600188e7b14693ee0ace52fb20a8b 509 PRINTS PR00113 Alkaline phosphatase signature 176 196 2.0E-33 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS10165 502600188e7b14693ee0ace52fb20a8b 509 SUPERFAMILY SSF53649 57 509 3.27E-128 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CHH28_RS10165 502600188e7b14693ee0ace52fb20a8b 509 Gene3D G3DSA:3.40.720.10 33 509 3.5E-131 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CHH28_RS17180 a0b227285f075d28a83f14e6786f6aee 371 SUPERFAMILY SSF48371 32 248 2.83E-43 T 29-03-2018 IPR016024 Armadillo-type fold GO:0005488 CHH28_RS17180 a0b227285f075d28a83f14e6786f6aee 371 Pfam PF08713 DNA alkylation repair enzyme 130 222 2.2E-4 T 29-03-2018 IPR014825 DNA alkylation repair enzyme CHH28_RS17180 a0b227285f075d28a83f14e6786f6aee 371 Gene3D G3DSA:1.25.40.290 140 251 1.8E-21 T 29-03-2018 CHH28_RS11320 1f0f120db212fec7d81487ed50e8e9a9 709 SMART SM00304 378 432 7.2E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS11320 1f0f120db212fec7d81487ed50e8e9a9 709 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 520 671 3.4E-45 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS11320 1f0f120db212fec7d81487ed50e8e9a9 709 Gene3D G3DSA:1.10.287.950 372 475 5.4E-4 T 29-03-2018 CHH28_RS11320 1f0f120db212fec7d81487ed50e8e9a9 709 SMART SM00283 447 708 7.0E-63 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS11320 1f0f120db212fec7d81487ed50e8e9a9 709 Gene3D G3DSA:1.10.287.950 476 672 4.2E-53 T 29-03-2018 CHH28_RS11320 1f0f120db212fec7d81487ed50e8e9a9 709 SUPERFAMILY SSF58104 400 707 1.16E-69 T 29-03-2018 CHH28_RS11320 1f0f120db212fec7d81487ed50e8e9a9 709 Gene3D G3DSA:3.30.450.20 225 346 7.8E-10 T 29-03-2018 CHH28_RS11320 1f0f120db212fec7d81487ed50e8e9a9 709 Gene3D G3DSA:3.30.450.20 81 224 1.4E-18 T 29-03-2018 CHH28_RS11785 d340f802bce278306375e898a44f3f9b 352 Pfam PF11873 Domain of unknown function (DUF3393) 40 180 8.0E-44 T 29-03-2018 IPR024570 Murein transglycosylase-C, N-terminal CHH28_RS11785 d340f802bce278306375e898a44f3f9b 352 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 204 232 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CHH28_RS11785 d340f802bce278306375e898a44f3f9b 352 Pfam PF01464 Transglycosylase SLT domain 186 312 2.3E-29 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CHH28_RS11785 d340f802bce278306375e898a44f3f9b 352 SUPERFAMILY SSF53955 182 349 1.44E-34 T 29-03-2018 IPR023346 Lysozyme-like domain CHH28_RS11785 d340f802bce278306375e898a44f3f9b 352 Gene3D G3DSA:1.10.530.10 173 348 5.1E-35 T 29-03-2018 CHH28_RS07280 68778e424bf19df01bb016665ce0d654 160 SUPERFAMILY SSF81301 24 158 4.9E-19 T 29-03-2018 CHH28_RS15060 caacd3da0652abe2b388b78284d30b89 184 Pfam PF05036 Sporulation related domain 107 176 6.1E-16 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CHH28_RS15060 caacd3da0652abe2b388b78284d30b89 184 SUPERFAMILY SSF110997 106 177 1.11E-16 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CHH28_RS15060 caacd3da0652abe2b388b78284d30b89 184 Gene3D G3DSA:3.30.70.1070 105 178 1.2E-14 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CHH28_RS01660 b1816ac4e092ab264b819583aba6cfcc 493 Gene3D G3DSA:3.40.50.300 8 170 5.3E-8 T 29-03-2018 CHH28_RS01660 b1816ac4e092ab264b819583aba6cfcc 493 SUPERFAMILY SSF52540 41 197 1.63E-12 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS01660 b1816ac4e092ab264b819583aba6cfcc 493 Gene3D G3DSA:3.30.70.1070 409 474 4.9E-5 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CHH28_RS01660 b1816ac4e092ab264b819583aba6cfcc 493 Pfam PF13401 AAA domain 43 166 1.9E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS01660 b1816ac4e092ab264b819583aba6cfcc 493 SMART SM00382 42 186 0.0018 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS01660 b1816ac4e092ab264b819583aba6cfcc 493 SUPERFAMILY SSF110997 407 472 6.02E-5 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CHH28_RS01660 b1816ac4e092ab264b819583aba6cfcc 493 Pfam PF05036 Sporulation related domain 408 483 2.1E-9 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CHH28_RS03125 8618d8b1e7e398e475915b8457baa440 514 SUPERFAMILY SSF74653 399 514 9.81E-14 T 29-03-2018 CHH28_RS03125 8618d8b1e7e398e475915b8457baa440 514 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 438 514 5.6E-9 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CHH28_RS03125 8618d8b1e7e398e475915b8457baa440 514 Pfam PF16036 Chalcone isomerase-like 25 176 1.3E-21 T 29-03-2018 IPR016087 Chalcone isomerase GO:0016872 CHH28_RS03125 8618d8b1e7e398e475915b8457baa440 514 Gene3D G3DSA:3.50.70.10 12 185 2.1E-4 T 29-03-2018 IPR016088 Chalcone isomerase, 3-layer sandwich GO:0009813|GO:0045430 CHH28_RS03125 8618d8b1e7e398e475915b8457baa440 514 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 440 514 6.6E-10 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CHH28_RS03125 8618d8b1e7e398e475915b8457baa440 514 SUPERFAMILY SSF74653 283 392 7.19E-7 T 29-03-2018 CHH28_RS03125 8618d8b1e7e398e475915b8457baa440 514 Gene3D G3DSA:3.30.1150.10 298 391 9.3E-4 T 29-03-2018 CHH28_RS03125 8618d8b1e7e398e475915b8457baa440 514 Gene3D G3DSA:3.30.1150.10 395 514 1.3E-13 T 29-03-2018 CHH28_RS06780 caabf0f1379f077f26c7d0823ab640d9 258 Gene3D G3DSA:3.40.190.10 14 123 1.8E-13 T 29-03-2018 CHH28_RS06780 caabf0f1379f077f26c7d0823ab640d9 258 SUPERFAMILY SSF53850 15 248 9.51E-31 T 29-03-2018 CHH28_RS06780 caabf0f1379f077f26c7d0823ab640d9 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 249 2.2E-12 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS06780 caabf0f1379f077f26c7d0823ab640d9 258 Gene3D G3DSA:3.40.190.10 132 253 1.4E-4 T 29-03-2018 CHH28_RS06020 78b16be2fcb5d4e84e6b2baf95f15fb4 200 Pfam PF00573 Ribosomal protein L4/L1 family 11 197 1.1E-62 T 29-03-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CHH28_RS06020 78b16be2fcb5d4e84e6b2baf95f15fb4 200 SUPERFAMILY SSF52166 7 199 8.76E-70 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CHH28_RS06020 78b16be2fcb5d4e84e6b2baf95f15fb4 200 Gene3D G3DSA:3.40.1370.10 1 142 8.9E-47 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CHH28_RS06020 78b16be2fcb5d4e84e6b2baf95f15fb4 200 Gene3D G3DSA:3.40.1370.10 143 198 1.1E-9 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CHH28_RS06020 78b16be2fcb5d4e84e6b2baf95f15fb4 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 200 33.261 T 29-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06020 78b16be2fcb5d4e84e6b2baf95f15fb4 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 1.2E-73 T 29-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS14970 b61cb5503ea6a7670744272bf04af5de 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 271 74.024 T 29-03-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein CHH28_RS14970 b61cb5503ea6a7670744272bf04af5de 273 Pfam PF03618 Kinase/pyrophosphorylase 6 262 2.5E-77 T 29-03-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 CHH28_RS11825 9380587b608101c19e4e6bf3cb9e0cc8 786 Pfam PF13604 AAA domain 207 382 3.6E-31 T 29-03-2018 CHH28_RS11825 9380587b608101c19e4e6bf3cb9e0cc8 786 SUPERFAMILY SSF52540 33 423 1.5E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11825 9380587b608101c19e4e6bf3cb9e0cc8 786 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 40 744 47.814 T 29-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CHH28_RS11825 9380587b608101c19e4e6bf3cb9e0cc8 786 Gene3D G3DSA:3.40.50.300 428 734 1.7E-23 T 29-03-2018 CHH28_RS11825 9380587b608101c19e4e6bf3cb9e0cc8 786 Pfam PF13538 UvrD-like helicase C-terminal domain 674 717 2.5E-14 T 29-03-2018 IPR027785 UvrD-like helicase C-terminal domain CHH28_RS11825 9380587b608101c19e4e6bf3cb9e0cc8 786 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 31 628 1.2E-140 T 29-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CHH28_RS11825 9380587b608101c19e4e6bf3cb9e0cc8 786 Gene3D G3DSA:3.40.50.300 158 418 1.3E-56 T 29-03-2018 CHH28_RS11825 9380587b608101c19e4e6bf3cb9e0cc8 786 SUPERFAMILY SSF52540 648 743 1.86E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11825 9380587b608101c19e4e6bf3cb9e0cc8 786 SUPERFAMILY SSF52540 343 382 1.86E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11825 9380587b608101c19e4e6bf3cb9e0cc8 786 SUPERFAMILY SSF52540 410 441 1.86E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11825 9380587b608101c19e4e6bf3cb9e0cc8 786 SUPERFAMILY SSF52540 536 606 1.86E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS01300 03f1e88f283356dc0e36e17e9ae6b1e8 99 SUPERFAMILY SSF82771 5 76 7.06E-11 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CHH28_RS01300 03f1e88f283356dc0e36e17e9ae6b1e8 99 Gene3D G3DSA:3.40.1440.10 2 83 3.6E-6 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CHH28_RS01300 03f1e88f283356dc0e36e17e9ae6b1e8 99 Pfam PF01541 GIY-YIG catalytic domain 5 78 1.8E-14 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CHH28_RS14060 b39d083407d067a69076bb2f38c3d3f6 354 Pfam PF01343 Peptidase family S49 164 312 5.7E-45 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CHH28_RS14060 b39d083407d067a69076bb2f38c3d3f6 354 Pfam PF08496 Peptidase family S49 N-terminal 2 160 3.7E-56 T 29-03-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 CHH28_RS14060 b39d083407d067a69076bb2f38c3d3f6 354 Gene3D G3DSA:3.90.226.10 25 310 2.7E-30 T 29-03-2018 CHH28_RS14060 b39d083407d067a69076bb2f38c3d3f6 354 SUPERFAMILY SSF52096 103 211 1.12E-30 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS14060 b39d083407d067a69076bb2f38c3d3f6 354 SUPERFAMILY SSF52096 242 301 1.12E-30 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS14755 cafbcf8fc8d087dab5f0b8276f89d686 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 186 5.0E-4 T 29-03-2018 CHH28_RS14755 cafbcf8fc8d087dab5f0b8276f89d686 248 SUPERFAMILY SSF51735 3 247 1.89E-81 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS14755 cafbcf8fc8d087dab5f0b8276f89d686 248 Gene3D G3DSA:3.40.50.720 43 248 3.4E-64 T 29-03-2018 CHH28_RS14755 cafbcf8fc8d087dab5f0b8276f89d686 248 Gene3D G3DSA:3.40.50.720 1 42 3.1E-7 T 29-03-2018 CHH28_RS14755 cafbcf8fc8d087dab5f0b8276f89d686 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 244 3.5E-60 T 29-03-2018 CHH28_RS14755 cafbcf8fc8d087dab5f0b8276f89d686 248 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 247 9.1E-112 T 29-03-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216 CHH28_RS14755 cafbcf8fc8d087dab5f0b8276f89d686 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.6E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS14755 cafbcf8fc8d087dab5f0b8276f89d686 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.6E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS14755 cafbcf8fc8d087dab5f0b8276f89d686 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.6E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS14755 cafbcf8fc8d087dab5f0b8276f89d686 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.3E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS14755 cafbcf8fc8d087dab5f0b8276f89d686 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.3E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS14755 cafbcf8fc8d087dab5f0b8276f89d686 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.3E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS14755 cafbcf8fc8d087dab5f0b8276f89d686 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.3E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS14755 cafbcf8fc8d087dab5f0b8276f89d686 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.3E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS14755 cafbcf8fc8d087dab5f0b8276f89d686 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.3E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS14755 cafbcf8fc8d087dab5f0b8276f89d686 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CHH28_RS04320 22a42ea9fb9bcafc891638a632f36e00 106 Pfam PF03992 Antibiotic biosynthesis monooxygenase 2 76 2.2E-16 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CHH28_RS04320 22a42ea9fb9bcafc891638a632f36e00 106 Gene3D G3DSA:3.30.70.100 1 94 9.0E-23 T 29-03-2018 CHH28_RS04320 22a42ea9fb9bcafc891638a632f36e00 106 SUPERFAMILY SSF54909 1 98 6.71E-27 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CHH28_RS09465 184fcfd2ee1f37e05f4f2f69f5cbea1b 316 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 304 29.571 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CHH28_RS09465 184fcfd2ee1f37e05f4f2f69f5cbea1b 316 SUPERFAMILY SSF52540 7 78 4.21E-10 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09465 184fcfd2ee1f37e05f4f2f69f5cbea1b 316 SUPERFAMILY SSF52540 156 213 4.21E-10 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09465 184fcfd2ee1f37e05f4f2f69f5cbea1b 316 SUPERFAMILY SSF52540 252 295 4.21E-10 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09465 184fcfd2ee1f37e05f4f2f69f5cbea1b 316 Pfam PF01715 IPP transferase 41 287 1.8E-83 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CHH28_RS09465 184fcfd2ee1f37e05f4f2f69f5cbea1b 316 SUPERFAMILY SSF52540 8 152 2.01E-15 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09465 184fcfd2ee1f37e05f4f2f69f5cbea1b 316 Gene3D G3DSA:3.40.50.300 4 198 7.1E-60 T 29-03-2018 CHH28_RS09465 184fcfd2ee1f37e05f4f2f69f5cbea1b 316 Gene3D G3DSA:1.10.287.890 203 285 1.6E-25 T 29-03-2018 CHH28_RS09465 184fcfd2ee1f37e05f4f2f69f5cbea1b 316 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 296 1.7E-104 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CHH28_RS03775 d6316039ef4a4a529c3b6b630d91dbdd 341 SUPERFAMILY SSF52172 7 129 7.68E-34 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS03775 d6316039ef4a4a529c3b6b630d91dbdd 341 Gene3D G3DSA:1.10.3210.10 117 329 1.8E-51 T 29-03-2018 CHH28_RS03775 d6316039ef4a4a529c3b6b630d91dbdd 341 SMART SM00448 9 121 2.0E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS03775 d6316039ef4a4a529c3b6b630d91dbdd 341 SUPERFAMILY SSF109604 136 318 1.19E-41 T 29-03-2018 CHH28_RS03775 d6316039ef4a4a529c3b6b630d91dbdd 341 Pfam PF13487 HD domain 206 269 5.0E-19 T 29-03-2018 CHH28_RS03775 d6316039ef4a4a529c3b6b630d91dbdd 341 SMART SM00471 151 288 2.7E-10 T 29-03-2018 IPR003607 HD/PDEase domain CHH28_RS03775 d6316039ef4a4a529c3b6b630d91dbdd 341 Gene3D G3DSA:3.40.50.2300 2 116 2.2E-27 T 29-03-2018 CHH28_RS03775 d6316039ef4a4a529c3b6b630d91dbdd 341 Pfam PF00072 Response regulator receiver domain 11 121 8.7E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13030 e9d7fbee8e39e846e80c947392e4b7f9 418 Gene3D G3DSA:3.90.1150.10 303 418 5.0E-23 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS13030 e9d7fbee8e39e846e80c947392e4b7f9 418 Gene3D G3DSA:3.90.1150.10 2 166 5.0E-32 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS13030 e9d7fbee8e39e846e80c947392e4b7f9 418 PIRSF PIRSF000521 120 414 4.1E-35 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS13030 e9d7fbee8e39e846e80c947392e4b7f9 418 PIRSF PIRSF000521 16 128 0.0043 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS13030 e9d7fbee8e39e846e80c947392e4b7f9 418 Gene3D G3DSA:3.40.640.10 177 302 1.8E-25 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS13030 e9d7fbee8e39e846e80c947392e4b7f9 418 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 232 268 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS13030 e9d7fbee8e39e846e80c947392e4b7f9 418 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 416 6.6E-129 T 29-03-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855 CHH28_RS13030 e9d7fbee8e39e846e80c947392e4b7f9 418 SUPERFAMILY SSF53383 7 412 1.81E-105 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS13030 e9d7fbee8e39e846e80c947392e4b7f9 418 Pfam PF00202 Aminotransferase class-III 20 411 1.1E-76 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 5 196 1.1E-40 T 29-03-2018 IPR003111 Lon, substrate-binding domain CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 SUPERFAMILY SSF88697 5 196 2.73E-47 T 29-03-2018 IPR015947 PUA-like domain CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 PIRSF PIRSF001174 1 770 0.0 T 29-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 Gene3D G3DSA:2.30.130.40 1 113 2.9E-30 T 29-03-2018 CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 347 483 7.9E-18 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 SUPERFAMILY SSF54211 590 765 9.48E-57 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 Gene3D G3DSA:3.40.50.300 308 485 3.2E-29 T 29-03-2018 CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 Hamap MF_01973 Lon protease [lon]. 6 767 69.863 T 29-03-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 SUPERFAMILY SSF52540 308 581 5.23E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 565 767 4.6E-93 T 29-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 SMART SM00464 5 197 7.6E-70 T 29-03-2018 IPR003111 Lon, substrate-binding domain CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 Gene3D G3DSA:1.10.4060.10 117 206 2.6E-28 T 29-03-2018 CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 351 370 2.7E-55 T 29-03-2018 CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 668 687 2.7E-55 T 29-03-2018 CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 590 606 2.7E-55 T 29-03-2018 CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 698 717 2.7E-55 T 29-03-2018 CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 721 739 2.7E-55 T 29-03-2018 CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 TIGRFAM TIGR00763 lon: endopeptidase La 7 766 6.9E-300 T 29-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 Gene3D G3DSA:3.30.230.10 583 767 1.1E-64 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 Gene3D G3DSA:1.10.8.60 486 579 3.9E-30 T 29-03-2018 CHH28_RS14035 2f51c8875e19b2d4e84647eddcb63bf8 796 SMART SM00382 343 489 1.3E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS12555 9385664ef48ff53fe6d2e246aa7111f9 338 PIRSF PIRSF002825 14 338 2.7E-88 T 29-03-2018 IPR026045 Ferric binding protein CHH28_RS12555 9385664ef48ff53fe6d2e246aa7111f9 338 Pfam PF13343 Bacterial extracellular solute-binding protein 74 305 1.7E-23 T 29-03-2018 CHH28_RS12555 9385664ef48ff53fe6d2e246aa7111f9 338 Gene3D G3DSA:3.40.190.10 20 136 6.3E-10 T 29-03-2018 CHH28_RS12555 9385664ef48ff53fe6d2e246aa7111f9 338 Gene3D G3DSA:3.40.190.10 137 297 3.5E-31 T 29-03-2018 CHH28_RS12555 9385664ef48ff53fe6d2e246aa7111f9 338 SUPERFAMILY SSF53850 25 334 3.1E-80 T 29-03-2018 CHH28_RS12910 96a02d1d609ed1ac73aea0927c384985 390 SUPERFAMILY SSF111369 63 227 7.19E-16 T 29-03-2018 CHH28_RS12910 96a02d1d609ed1ac73aea0927c384985 390 Gene3D G3DSA:2.40.50.100 73 163 5.6E-5 T 29-03-2018 CHH28_RS12910 96a02d1d609ed1ac73aea0927c384985 390 Gene3D G3DSA:2.40.50.100 164 378 1.9E-6 T 29-03-2018 CHH28_RS10170 70d60f39fe1547dc1468a0bf195fcab2 83 Gene3D G3DSA:3.30.1320.10 1 79 3.2E-34 T 29-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS10170 70d60f39fe1547dc1468a0bf195fcab2 83 Pfam PF00886 Ribosomal protein S16 8 68 1.1E-25 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS10170 70d60f39fe1547dc1468a0bf195fcab2 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 25.216 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS10170 70d60f39fe1547dc1468a0bf195fcab2 83 SUPERFAMILY SSF54565 1 76 1.44E-30 T 29-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS10170 70d60f39fe1547dc1468a0bf195fcab2 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 4.1E-30 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS04640 ced210abb7e5510122df9690f82326e5 371 Pfam PF07591 Pretoxin HINT domain 13 138 1.3E-15 T 29-03-2018 CHH28_RS04640 ced210abb7e5510122df9690f82326e5 371 Gene3D G3DSA:2.170.16.10 2 137 1.8E-29 T 29-03-2018 CHH28_RS04640 ced210abb7e5510122df9690f82326e5 371 Gene3D G3DSA:3.40.1350.10 218 348 5.7E-4 T 29-03-2018 CHH28_RS04640 ced210abb7e5510122df9690f82326e5 371 SUPERFAMILY SSF51294 7 136 5.76E-19 T 29-03-2018 IPR028992 Hedgehog/Intein (Hint) domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CHH28_RS04640 ced210abb7e5510122df9690f82326e5 371 SMART SM00306 4 98 3.0E-4 T 29-03-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CHH28_RS00290 3e6dc3ea54a1fc530b487a8a80577827 264 Pfam PF03799 Cell division protein FtsQ 138 248 2.8E-9 T 29-03-2018 IPR005548 Cell division protein FtsQ/DivIB CHH28_RS00290 3e6dc3ea54a1fc530b487a8a80577827 264 Pfam PF08478 POTRA domain, FtsQ-type 66 133 8.8E-11 T 29-03-2018 IPR013685 POTRA domain, FtsQ-type CHH28_RS02370 8d29707f3d68f5a9296c447cf0472099 271 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 261 7.0E-60 T 29-03-2018 CHH28_RS02370 8d29707f3d68f5a9296c447cf0472099 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 4.4E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS02370 8d29707f3d68f5a9296c447cf0472099 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 4.4E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS02370 8d29707f3d68f5a9296c447cf0472099 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 4.4E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS02370 8d29707f3d68f5a9296c447cf0472099 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 4.4E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS02370 8d29707f3d68f5a9296c447cf0472099 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 4.4E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS02370 8d29707f3d68f5a9296c447cf0472099 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.4E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS02370 8d29707f3d68f5a9296c447cf0472099 271 Gene3D G3DSA:3.40.50.720 1 44 2.6E-11 T 29-03-2018 CHH28_RS02370 8d29707f3d68f5a9296c447cf0472099 271 Gene3D G3DSA:3.40.50.720 45 268 3.3E-54 T 29-03-2018 CHH28_RS02370 8d29707f3d68f5a9296c447cf0472099 271 SUPERFAMILY SSF51735 7 262 5.72E-73 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS02370 8d29707f3d68f5a9296c447cf0472099 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 7.7E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS02370 8d29707f3d68f5a9296c447cf0472099 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 7.7E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS02370 8d29707f3d68f5a9296c447cf0472099 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 7.7E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS07190 0e7d68e417699c3a30fcf2c6a3da8123 171 SUPERFAMILY SSF55729 1 158 1.1E-37 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS07190 0e7d68e417699c3a30fcf2c6a3da8123 171 Pfam PF13302 Acetyltransferase (GNAT) domain 9 147 2.9E-28 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS07190 0e7d68e417699c3a30fcf2c6a3da8123 171 Gene3D G3DSA:3.40.630.30 1 171 3.8E-24 T 29-03-2018 CHH28_RS14975 1f74be750afc039c810974fc5bde34d6 277 SUPERFAMILY SSF53474 20 274 6.61E-22 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS14975 1f74be750afc039c810974fc5bde34d6 277 Gene3D G3DSA:3.40.50.1820 4 277 5.9E-18 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS14975 1f74be750afc039c810974fc5bde34d6 277 Pfam PF12697 Alpha/beta hydrolase family 32 272 1.4E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS07995 e47c1b67e51bff5c0b2b97d321f85569 140 Pfam PF02566 OsmC-like protein 34 131 5.3E-17 T 29-03-2018 IPR003718 OsmC/Ohr family CHH28_RS07995 e47c1b67e51bff5c0b2b97d321f85569 140 Gene3D G3DSA:3.30.300.20 22 140 6.3E-29 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CHH28_RS07995 e47c1b67e51bff5c0b2b97d321f85569 140 SUPERFAMILY SSF82784 1 138 3.27E-39 T 29-03-2018 IPR003718 OsmC/Ohr family CHH28_RS07995 e47c1b67e51bff5c0b2b97d321f85569 140 Gene3D G3DSA:2.20.25.10 1 21 4.1E-16 T 29-03-2018 CHH28_RS13550 a5a808ef22dbbeb6d69a3fef7307cd02 375 Gene3D G3DSA:3.30.1400.10 231 363 3.4E-39 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CHH28_RS13550 a5a808ef22dbbeb6d69a3fef7307cd02 375 SUPERFAMILY SSF64383 230 366 3.01E-37 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CHH28_RS13550 a5a808ef22dbbeb6d69a3fef7307cd02 375 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 233 360 2.0E-27 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CHH28_RS13550 a5a808ef22dbbeb6d69a3fef7307cd02 375 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 233 359 6.5E-38 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CHH28_RS13550 a5a808ef22dbbeb6d69a3fef7307cd02 375 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 362 18.395 T 29-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 CHH28_RS13550 a5a808ef22dbbeb6d69a3fef7307cd02 375 SMART SM00771 230 360 1.2E-29 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CHH28_RS10050 a0fd0aa28f1a373463bc9404254823d6 342 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 83 335 2.5E-42 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CHH28_RS10050 a0fd0aa28f1a373463bc9404254823d6 342 SUPERFAMILY SSF56529 78 337 4.19E-59 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CHH28_RS10050 a0fd0aa28f1a373463bc9404254823d6 342 Gene3D G3DSA:3.90.850.10 27 335 8.9E-54 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CHH28_RS01395 19fcb56db4fa629ef97e4423eb820140 407 SUPERFAMILY SSF81891 120 400 1.44E-55 T 29-03-2018 CHH28_RS01395 19fcb56db4fa629ef97e4423eb820140 407 Gene3D G3DSA:3.30.460.10 1 118 7.1E-31 T 29-03-2018 CHH28_RS01395 19fcb56db4fa629ef97e4423eb820140 407 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 53.161 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CHH28_RS01395 19fcb56db4fa629ef97e4423eb820140 407 SUPERFAMILY SSF81301 1 119 2.29E-31 T 29-03-2018 CHH28_RS01395 19fcb56db4fa629ef97e4423eb820140 407 Pfam PF01966 HD domain 230 326 1.8E-7 T 29-03-2018 IPR006674 HD domain CHH28_RS01395 19fcb56db4fa629ef97e4423eb820140 407 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.542 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CHH28_RS01395 19fcb56db4fa629ef97e4423eb820140 407 Gene3D G3DSA:1.10.3090.10 119 406 1.2E-57 T 29-03-2018 CHH28_RS01395 19fcb56db4fa629ef97e4423eb820140 407 PIRSF PIRSF000813 1 407 1.4E-196 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CHH28_RS01395 19fcb56db4fa629ef97e4423eb820140 407 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 211 1.7E-11 T 29-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CHH28_RS01395 19fcb56db4fa629ef97e4423eb820140 407 Pfam PF01743 Poly A polymerase head domain 3 122 4.4E-19 T 29-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CHH28_RS15560 daae867accbb41a6d8058180efcb8751 374 SUPERFAMILY SSF51197 2 286 2.88E-69 T 29-03-2018 CHH28_RS15560 daae867accbb41a6d8058180efcb8751 374 Pfam PF08007 Cupin superfamily protein 9 289 1.5E-84 T 29-03-2018 IPR003347 JmjC domain CHH28_RS15560 daae867accbb41a6d8058180efcb8751 374 SMART SM00558 87 224 0.0011 T 29-03-2018 IPR003347 JmjC domain CHH28_RS15560 daae867accbb41a6d8058180efcb8751 374 Gene3D G3DSA:2.60.120.650 1 214 1.3E-30 T 29-03-2018 CHH28_RS03165 55c05024504f20c2ed4827521867afcb 287 Gene3D G3DSA:1.20.1270.90 89 145 0.01 T 29-03-2018 CHH28_RS03165 55c05024504f20c2ed4827521867afcb 287 Gene3D G3DSA:1.20.1170.10 146 287 0.014 T 29-03-2018 CHH28_RS15250 2c26e28f0bf3747637efab9ee40f00df 469 SMART SM00387 357 449 4.5E-4 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS15250 2c26e28f0bf3747637efab9ee40f00df 469 Gene3D G3DSA:3.30.450.20 27 210 5.3E-48 T 29-03-2018 CHH28_RS15250 2c26e28f0bf3747637efab9ee40f00df 469 Gene3D G3DSA:3.30.565.10 316 452 1.5E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS15250 2c26e28f0bf3747637efab9ee40f00df 469 Pfam PF07730 Histidine kinase 255 317 3.5E-15 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CHH28_RS15250 2c26e28f0bf3747637efab9ee40f00df 469 SUPERFAMILY SSF55874 323 444 2.88E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS15250 2c26e28f0bf3747637efab9ee40f00df 469 Pfam PF17200 Single Cache domain 2 48 195 1.6E-37 T 29-03-2018 IPR033480 Single Cache domain 2 CHH28_RS15250 2c26e28f0bf3747637efab9ee40f00df 469 SMART SM01049 44 137 2.6E-21 T 29-03-2018 IPR033480 Single Cache domain 2 CHH28_RS07665 523c686e3a46e50a16cd625d8f6d2769 284 SUPERFAMILY SSF53474 31 164 3.04E-29 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS07665 523c686e3a46e50a16cd625d8f6d2769 284 SUPERFAMILY SSF53474 194 269 3.04E-29 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS07665 523c686e3a46e50a16cd625d8f6d2769 284 Pfam PF00326 Prolyl oligopeptidase family 126 268 2.0E-11 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CHH28_RS07665 523c686e3a46e50a16cd625d8f6d2769 284 Gene3D G3DSA:3.40.50.1820 21 281 6.1E-28 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS09380 13c489070fb75fd47a61e4ae393fa787 347 TIGRFAM TIGR00238 TIGR00238: KamA family protein 10 327 3.9E-94 T 29-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CHH28_RS09380 13c489070fb75fd47a61e4ae393fa787 347 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 334 9.5E-139 T 29-03-2018 IPR022462 Lysine-2,3-aminomutase-like CHH28_RS09380 13c489070fb75fd47a61e4ae393fa787 347 Gene3D G3DSA:3.20.20.70 102 333 2.0E-17 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS09380 13c489070fb75fd47a61e4ae393fa787 347 SUPERFAMILY SSF102114 101 323 1.83E-25 T 29-03-2018 CHH28_RS09380 13c489070fb75fd47a61e4ae393fa787 347 PIRSF PIRSF004911 4 345 2.0E-108 T 29-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CHH28_RS09380 13c489070fb75fd47a61e4ae393fa787 347 Pfam PF13353 4Fe-4S single cluster domain 110 181 4.0E-6 T 29-03-2018 CHH28_RS09380 13c489070fb75fd47a61e4ae393fa787 347 Pfam PF04055 Radical SAM superfamily 117 246 5.1E-8 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CHH28_RS14435 647730611f75bda494109767f3508c29 367 Gene3D G3DSA:3.40.50.2300 34 151 1.5E-25 T 29-03-2018 CHH28_RS14435 647730611f75bda494109767f3508c29 367 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 37 312 1.1E-55 T 29-03-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 CHH28_RS14435 647730611f75bda494109767f3508c29 367 Gene3D G3DSA:3.40.50.2300 152 366 1.5E-50 T 29-03-2018 CHH28_RS09680 f44d72358caf23d210656747f044c725 488 SUPERFAMILY SSF52540 233 452 1.05E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09680 f44d72358caf23d210656747f044c725 488 Gene3D G3DSA:3.40.50.300 226 399 1.3E-29 T 29-03-2018 CHH28_RS09680 f44d72358caf23d210656747f044c725 488 SUPERFAMILY SSF52540 80 210 2.95E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09680 f44d72358caf23d210656747f044c725 488 Gene3D G3DSA:1.10.8.60 400 474 1.0E-8 T 29-03-2018 CHH28_RS09680 f44d72358caf23d210656747f044c725 488 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 266 392 6.2E-27 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CHH28_RS09680 f44d72358caf23d210656747f044c725 488 Gene3D G3DSA:3.40.50.300 23 163 0.19 T 29-03-2018 CHH28_RS09680 f44d72358caf23d210656747f044c725 488 SMART SM00382 262 395 1.7E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS08455 1498331f0e0ac09b524724563282277a 410 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 282 384 2.0E-42 T 29-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 CHH28_RS08455 1498331f0e0ac09b524724563282277a 410 Gene3D G3DSA:1.20.810.10 10 405 3.1E-156 T 29-03-2018 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 CHH28_RS08455 1498331f0e0ac09b524724563282277a 410 PIRSF PIRSF038885 1 410 2.2E-156 T 29-03-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 CHH28_RS08455 1498331f0e0ac09b524724563282277a 410 SUPERFAMILY SSF81648 286 401 5.01E-33 T 29-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 CHH28_RS08455 1498331f0e0ac09b524724563282277a 410 SUPERFAMILY SSF81342 10 284 3.77E-90 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CHH28_RS08455 1498331f0e0ac09b524724563282277a 410 Pfam PF00033 Cytochrome b/b6/petB 28 216 4.3E-62 T 29-03-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 CHH28_RS06925 ea7d775c349721ca2254603378f25ef6 208 SUPERFAMILY SSF55729 13 176 3.15E-12 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS06925 ea7d775c349721ca2254603378f25ef6 208 Gene3D G3DSA:3.40.630.30 6 183 1.0E-13 T 29-03-2018 CHH28_RS10390 7c4a83d3b5eef41793126f6fb4e5de44 265 Pfam PF04280 Tim44-like domain 143 263 1.9E-13 T 29-03-2018 IPR007379 Tim44-like domain CHH28_RS10390 7c4a83d3b5eef41793126f6fb4e5de44 265 SUPERFAMILY SSF54427 143 263 1.23E-13 T 29-03-2018 IPR032710 NTF2-like domain CHH28_RS10390 7c4a83d3b5eef41793126f6fb4e5de44 265 SMART SM00978 135 264 8.3E-24 T 29-03-2018 IPR007379 Tim44-like domain CHH28_RS07810 dc0fb2de7b13c6a1cb297a6caf14e758 351 PIRSF PIRSF001619 1 327 1.2E-135 T 29-03-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CHH28_RS07810 dc0fb2de7b13c6a1cb297a6caf14e758 351 SMART SM00876 228 320 6.9E-44 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CHH28_RS07810 dc0fb2de7b13c6a1cb297a6caf14e758 351 Pfam PF04055 Radical SAM superfamily 58 210 3.8E-15 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CHH28_RS07810 dc0fb2de7b13c6a1cb297a6caf14e758 351 Hamap MF_01694 Biotin synthase [bioB]. 13 321 42.238 T 29-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CHH28_RS07810 dc0fb2de7b13c6a1cb297a6caf14e758 351 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 228 318 1.1E-18 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CHH28_RS07810 dc0fb2de7b13c6a1cb297a6caf14e758 351 TIGRFAM TIGR00433 bioB: biotin synthase 23 318 2.4E-125 T 29-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CHH28_RS07810 dc0fb2de7b13c6a1cb297a6caf14e758 351 SUPERFAMILY SSF102114 13 318 6.67E-94 T 29-03-2018 CHH28_RS07810 dc0fb2de7b13c6a1cb297a6caf14e758 351 Gene3D G3DSA:3.20.20.70 12 323 1.2E-56 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS07810 dc0fb2de7b13c6a1cb297a6caf14e758 351 SMART SM00729 51 263 7.4E-36 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CHH28_RS12640 5324fe24e223a435613b17a7ac185c3d 216 Pfam PF06804 NlpB/DapX lipoprotein 86 208 8.4E-7 T 29-03-2018 IPR010653 NlpB/DapX lipoprotein CHH28_RS19080 7690b2e5cb86b8a95f3ebf7350ea5088 171 Pfam PF01047 MarR family 64 121 3.7E-16 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS19080 7690b2e5cb86b8a95f3ebf7350ea5088 171 Gene3D G3DSA:1.10.10.10 25 171 8.2E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS19080 7690b2e5cb86b8a95f3ebf7350ea5088 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 4.9E-5 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS19080 7690b2e5cb86b8a95f3ebf7350ea5088 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 133 4.9E-5 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS19080 7690b2e5cb86b8a95f3ebf7350ea5088 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 98 113 4.9E-5 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS19080 7690b2e5cb86b8a95f3ebf7350ea5088 171 SUPERFAMILY SSF46785 31 168 3.07E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS19080 7690b2e5cb86b8a95f3ebf7350ea5088 171 SMART SM00347 57 154 1.3E-15 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS18980 f8e5fb01a6d8c1377911e765267282ff 245 Pfam PF13144 Chaperone for flagella basal body P-ring formation 47 244 1.6E-43 T 29-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CHH28_RS18980 f8e5fb01a6d8c1377911e765267282ff 245 SMART SM00858 121 183 2.7E-10 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CHH28_RS18980 f8e5fb01a6d8c1377911e765267282ff 245 Gene3D G3DSA:3.90.1210.10 119 186 1.4E-11 T 29-03-2018 CHH28_RS18980 f8e5fb01a6d8c1377911e765267282ff 245 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 110 244 2.0E-37 T 29-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CHH28_RS10710 ed8f568cf468ed23d9a231e79b53a772 194 PIRSF PIRSF007531 1 194 9.6E-53 T 29-03-2018 IPR012853 Chloramphenicol phosphotransferase-like GO:0005524|GO:0016740 CHH28_RS10710 ed8f568cf468ed23d9a231e79b53a772 194 Gene3D G3DSA:3.40.50.300 1 188 1.2E-17 T 29-03-2018 CHH28_RS10710 ed8f568cf468ed23d9a231e79b53a772 194 Pfam PF07931 Chloramphenicol phosphotransferase-like protein 3 186 2.3E-52 T 29-03-2018 IPR012853 Chloramphenicol phosphotransferase-like GO:0005524|GO:0016740 CHH28_RS10710 ed8f568cf468ed23d9a231e79b53a772 194 SUPERFAMILY SSF52540 79 188 2.41E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS10710 ed8f568cf468ed23d9a231e79b53a772 194 SUPERFAMILY SSF52540 3 38 2.41E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS15945 c36f19059c3d8c25cd54f95875bc2f97 184 SUPERFAMILY SSF55811 2 161 2.98E-40 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CHH28_RS15945 c36f19059c3d8c25cd54f95875bc2f97 184 Gene3D G3DSA:3.90.79.10 36 180 2.4E-32 T 29-03-2018 CHH28_RS15945 c36f19059c3d8c25cd54f95875bc2f97 184 Pfam PF00293 NUDIX domain 46 143 2.6E-13 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CHH28_RS15945 c36f19059c3d8c25cd54f95875bc2f97 184 PRINTS PR00502 NUDIX hydrolase family signature 65 79 7.0E-5 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CHH28_RS15945 c36f19059c3d8c25cd54f95875bc2f97 184 PRINTS PR00502 NUDIX hydrolase family signature 79 94 7.0E-5 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CHH28_RS15945 c36f19059c3d8c25cd54f95875bc2f97 184 Gene3D G3DSA:2.20.70.10 1 34 9.5E-15 T 29-03-2018 CHH28_RS15945 c36f19059c3d8c25cd54f95875bc2f97 184 Pfam PF14803 Nudix N-terminal 2 35 5.8E-15 T 29-03-2018 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 CHH28_RS09910 3729bc0870608d22560dbcdf2cde6a75 135 Pfam PF04126 Cyclophilin-like 18 128 1.1E-29 T 29-03-2018 IPR025658 Cyclophilin TM1367-like domain CHH28_RS09910 3729bc0870608d22560dbcdf2cde6a75 135 SUPERFAMILY SSF50891 19 129 3.72E-20 T 29-03-2018 IPR029000 Cyclophilin-like domain CHH28_RS18010 460839183009144d9f0fd2a49f6e72a2 309 SUPERFAMILY SSF53850 91 305 4.24E-45 T 29-03-2018 CHH28_RS18010 460839183009144d9f0fd2a49f6e72a2 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.6E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS18010 460839183009144d9f0fd2a49f6e72a2 309 Gene3D G3DSA:3.40.190.10 88 173 1.2E-22 T 29-03-2018 CHH28_RS18010 460839183009144d9f0fd2a49f6e72a2 309 Gene3D G3DSA:3.40.190.10 174 271 6.0E-19 T 29-03-2018 CHH28_RS18010 460839183009144d9f0fd2a49f6e72a2 309 Gene3D G3DSA:1.10.10.10 1 85 4.2E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS18010 460839183009144d9f0fd2a49f6e72a2 309 Pfam PF03466 LysR substrate binding domain 91 299 5.5E-48 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS18010 460839183009144d9f0fd2a49f6e72a2 309 SUPERFAMILY SSF46785 1 111 5.75E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS18010 460839183009144d9f0fd2a49f6e72a2 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS18010 460839183009144d9f0fd2a49f6e72a2 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS18010 460839183009144d9f0fd2a49f6e72a2 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS16185 d78e27121dfcb6b9003c90742208750a 191 SUPERFAMILY SSF102400 49 190 1.44E-35 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CHH28_RS16185 d78e27121dfcb6b9003c90742208750a 191 Pfam PF04364 DNA polymerase III chi subunit, HolC 49 185 3.3E-34 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CHH28_RS16185 d78e27121dfcb6b9003c90742208750a 191 Gene3D G3DSA:3.40.50.10110 46 191 1.8E-41 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CHH28_RS08950 f15bed5f2f7c2bfd7f7801fb3c2edd08 177 PIRSF PIRSF033239 1 177 2.6E-45 T 29-03-2018 IPR010331 Exopolysaccharide synthesis, ExoD CHH28_RS08950 f15bed5f2f7c2bfd7f7801fb3c2edd08 177 Pfam PF06055 Exopolysaccharide synthesis, ExoD 2 171 5.8E-42 T 29-03-2018 IPR010331 Exopolysaccharide synthesis, ExoD CHH28_RS00820 0215f988e90898b7f1e9bc90e67c04b9 528 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 15 43 8.9E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CHH28_RS00820 0215f988e90898b7f1e9bc90e67c04b9 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 95 443 2.8E-65 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CHH28_RS00820 0215f988e90898b7f1e9bc90e67c04b9 528 SUPERFAMILY SSF53850 46 508 2.87E-112 T 29-03-2018 CHH28_RS00820 0215f988e90898b7f1e9bc90e67c04b9 528 PIRSF PIRSF002741 11 513 3.3E-75 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CHH28_RS00820 0215f988e90898b7f1e9bc90e67c04b9 528 Gene3D G3DSA:3.40.190.10 172 302 7.5E-29 T 29-03-2018 CHH28_RS00820 0215f988e90898b7f1e9bc90e67c04b9 528 Gene3D G3DSA:3.90.76.10 76 171 2.3E-21 T 29-03-2018 CHH28_RS00820 0215f988e90898b7f1e9bc90e67c04b9 528 Gene3D G3DSA:3.10.105.10 303 495 5.1E-39 T 29-03-2018 CHH28_RS16310 31604b741756bbf737f7b8319060254d 360 Gene3D G3DSA:1.10.10.60 305 356 1.0E-8 T 29-03-2018 CHH28_RS16310 31604b741756bbf737f7b8319060254d 360 Gene3D G3DSA:1.10.10.60 244 304 5.2E-6 T 29-03-2018 CHH28_RS16310 31604b741756bbf737f7b8319060254d 360 SUPERFAMILY SSF46689 306 356 2.02E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS16310 31604b741756bbf737f7b8319060254d 360 Pfam PF12833 Helix-turn-helix domain 277 354 1.7E-13 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS16310 31604b741756bbf737f7b8319060254d 360 SMART SM00342 271 353 2.3E-11 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS16310 31604b741756bbf737f7b8319060254d 360 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 50 231 9.7E-23 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS04605 a78c7964ae88de3d1f5af2215b437c25 131 Pfam PF03061 Thioesterase superfamily 29 103 2.6E-12 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CHH28_RS04605 a78c7964ae88de3d1f5af2215b437c25 131 SUPERFAMILY SSF54637 11 131 1.24E-30 T 29-03-2018 IPR029069 HotDog domain CHH28_RS04605 a78c7964ae88de3d1f5af2215b437c25 131 Gene3D G3DSA:3.10.129.10 6 131 6.7E-28 T 29-03-2018 CHH28_RS13015 85193684a18e1dff80c22a97c9302ecd 743 Gene3D G3DSA:3.40.50.1820 221 393 4.2E-5 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS13015 85193684a18e1dff80c22a97c9302ecd 743 SUPERFAMILY SSF53474 210 321 1.25E-5 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS13015 85193684a18e1dff80c22a97c9302ecd 743 SUPERFAMILY SSF53474 365 391 1.25E-5 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS02185 eab995b6173ef9b60a17210e0023939d 409 Gene3D G3DSA:3.75.10.10 5 405 1.5E-98 T 29-03-2018 CHH28_RS02185 eab995b6173ef9b60a17210e0023939d 409 PIRSF PIRSF006356 1 407 2.2E-134 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CHH28_RS02185 eab995b6173ef9b60a17210e0023939d 409 Pfam PF02274 Amidinotransferase 19 404 5.7E-102 T 29-03-2018 CHH28_RS02185 eab995b6173ef9b60a17210e0023939d 409 Hamap MF_00242 Arginine deiminase [arcA]. 2 407 45.576 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CHH28_RS02185 eab995b6173ef9b60a17210e0023939d 409 SUPERFAMILY SSF55909 4 406 6.19E-129 T 29-03-2018 CHH28_RS02185 eab995b6173ef9b60a17210e0023939d 409 PRINTS PR01466 Bacterial arginine deiminase signature 3 23 5.5E-49 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CHH28_RS02185 eab995b6173ef9b60a17210e0023939d 409 PRINTS PR01466 Bacterial arginine deiminase signature 150 168 5.5E-49 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CHH28_RS02185 eab995b6173ef9b60a17210e0023939d 409 PRINTS PR01466 Bacterial arginine deiminase signature 386 404 5.5E-49 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CHH28_RS02185 eab995b6173ef9b60a17210e0023939d 409 PRINTS PR01466 Bacterial arginine deiminase signature 178 193 5.5E-49 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CHH28_RS02185 eab995b6173ef9b60a17210e0023939d 409 PRINTS PR01466 Bacterial arginine deiminase signature 343 360 5.5E-49 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CHH28_RS02185 eab995b6173ef9b60a17210e0023939d 409 PRINTS PR01466 Bacterial arginine deiminase signature 363 377 5.5E-49 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CHH28_RS12285 c5d40ece9d8a343f563ed973a36fa9fb 211 Gene3D G3DSA:3.40.50.1820 2 210 2.6E-29 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS12285 c5d40ece9d8a343f563ed973a36fa9fb 211 Pfam PF12146 Serine aminopeptidase, S33 56 137 1.2E-7 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CHH28_RS12285 c5d40ece9d8a343f563ed973a36fa9fb 211 SUPERFAMILY SSF53474 3 197 5.31E-39 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS14930 afc49fe2fa86b5f1e4c3927d34dc8f9a 864 PRINTS PR00415 Aconitase family signature 469 482 1.0E-26 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS14930 afc49fe2fa86b5f1e4c3927d34dc8f9a 864 PRINTS PR00415 Aconitase family signature 267 280 1.0E-26 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS14930 afc49fe2fa86b5f1e4c3927d34dc8f9a 864 PRINTS PR00415 Aconitase family signature 407 418 1.0E-26 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS14930 afc49fe2fa86b5f1e4c3927d34dc8f9a 864 PRINTS PR00415 Aconitase family signature 162 170 1.0E-26 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS14930 afc49fe2fa86b5f1e4c3927d34dc8f9a 864 PRINTS PR00415 Aconitase family signature 191 204 1.0E-26 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS14930 afc49fe2fa86b5f1e4c3927d34dc8f9a 864 PRINTS PR00415 Aconitase family signature 205 220 1.0E-26 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS14930 afc49fe2fa86b5f1e4c3927d34dc8f9a 864 PRINTS PR00415 Aconitase family signature 360 374 1.0E-26 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS14930 afc49fe2fa86b5f1e4c3927d34dc8f9a 864 PRINTS PR00415 Aconitase family signature 138 151 1.0E-26 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS14930 afc49fe2fa86b5f1e4c3927d34dc8f9a 864 PRINTS PR00415 Aconitase family signature 281 294 1.0E-26 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS14930 afc49fe2fa86b5f1e4c3927d34dc8f9a 864 SUPERFAMILY SSF53732 24 591 5.1E-180 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS14930 afc49fe2fa86b5f1e4c3927d34dc8f9a 864 Pfam PF00330 Aconitase family (aconitate hydratase) 70 538 2.0E-145 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS14930 afc49fe2fa86b5f1e4c3927d34dc8f9a 864 SUPERFAMILY SSF52016 602 862 1.94E-66 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CHH28_RS14930 afc49fe2fa86b5f1e4c3927d34dc8f9a 864 Pfam PF00694 Aconitase C-terminal domain 660 791 9.5E-30 T 29-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS14930 afc49fe2fa86b5f1e4c3927d34dc8f9a 864 Gene3D G3DSA:3.40.1060.10 228 359 4.5E-40 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS14930 afc49fe2fa86b5f1e4c3927d34dc8f9a 864 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 862 0.0 T 29-03-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 CHH28_RS14930 afc49fe2fa86b5f1e4c3927d34dc8f9a 864 Gene3D G3DSA:3.30.499.10 360 552 1.9E-53 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS14930 afc49fe2fa86b5f1e4c3927d34dc8f9a 864 Gene3D G3DSA:3.30.499.10 2 227 9.4E-58 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CHH28_RS14930 afc49fe2fa86b5f1e4c3927d34dc8f9a 864 Gene3D G3DSA:3.20.19.10 622 863 6.8E-66 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CHH28_RS19105 2c6a33247d3e4af840495464773383ec 284 Pfam PF01063 Amino-transferase class IV 32 242 3.1E-24 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CHH28_RS19105 2c6a33247d3e4af840495464773383ec 284 Gene3D G3DSA:3.20.10.10 122 269 1.0E-20 T 29-03-2018 CHH28_RS19105 2c6a33247d3e4af840495464773383ec 284 SUPERFAMILY SSF56752 26 250 2.62E-30 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CHH28_RS19105 2c6a33247d3e4af840495464773383ec 284 Gene3D G3DSA:3.30.470.10 11 108 2.1E-8 T 29-03-2018 CHH28_RS06425 028bbfc9fc6c56246528dd72272e89e7 117 Gene3D G3DSA:3.10.450.50 4 108 3.0E-6 T 29-03-2018 CHH28_RS06425 028bbfc9fc6c56246528dd72272e89e7 117 SUPERFAMILY SSF54427 8 105 4.18E-7 T 29-03-2018 IPR032710 NTF2-like domain CHH28_RS04915 a3c419508d6ea4ae055c485873926d6e 273 Gene3D G3DSA:3.90.1200.10 95 264 6.4E-21 T 29-03-2018 CHH28_RS04915 a3c419508d6ea4ae055c485873926d6e 273 Gene3D G3DSA:3.30.200.20 2 91 4.5E-4 T 29-03-2018 CHH28_RS04915 a3c419508d6ea4ae055c485873926d6e 273 SUPERFAMILY SSF56112 9 260 2.92E-33 T 29-03-2018 IPR011009 Protein kinase-like domain CHH28_RS04915 a3c419508d6ea4ae055c485873926d6e 273 Pfam PF01636 Phosphotransferase enzyme family 22 230 2.6E-18 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CHH28_RS15580 32f2d0743ed818dbb4f0afa92b6e0ef8 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 262 1.1E-58 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CHH28_RS15580 32f2d0743ed818dbb4f0afa92b6e0ef8 335 Gene3D G3DSA:3.40.50.720 2 192 6.0E-38 T 29-03-2018 CHH28_RS15580 32f2d0743ed818dbb4f0afa92b6e0ef8 335 SUPERFAMILY SSF51735 2 333 3.64E-89 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS15580 32f2d0743ed818dbb4f0afa92b6e0ef8 335 Gene3D G3DSA:3.90.25.10 193 335 7.1E-37 T 29-03-2018 CHH28_RS15580 32f2d0743ed818dbb4f0afa92b6e0ef8 335 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 2.2E-26 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CHH28_RS15580 32f2d0743ed818dbb4f0afa92b6e0ef8 335 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 2.2E-26 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CHH28_RS15580 32f2d0743ed818dbb4f0afa92b6e0ef8 335 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 2.2E-26 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CHH28_RS15580 32f2d0743ed818dbb4f0afa92b6e0ef8 335 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 2.2E-26 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CHH28_RS08875 b3badc74188934e7ccc46467f1fa8d0a 132 Pfam PF13586 Transposase DDE domain 44 130 8.1E-12 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS08875 b3badc74188934e7ccc46467f1fa8d0a 132 Gene3D G3DSA:3.90.350.10 1 118 1.7E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS09315 fc67cd604b09ce0ac31ea935eeeb85bd 224 SUPERFAMILY SSF56529 12 217 7.59E-64 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CHH28_RS09315 fc67cd604b09ce0ac31ea935eeeb85bd 224 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 17 207 5.5E-49 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CHH28_RS09315 fc67cd604b09ce0ac31ea935eeeb85bd 224 Gene3D G3DSA:3.90.850.10 7 223 3.8E-69 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CHH28_RS00325 db121987b61143f6599cb20683e058dc 456 Pfam PF01225 Mur ligase family, catalytic domain 29 76 2.4E-9 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CHH28_RS00325 db121987b61143f6599cb20683e058dc 456 SUPERFAMILY SSF63418 6 102 2.49E-24 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CHH28_RS00325 db121987b61143f6599cb20683e058dc 456 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 34 449 5.3E-142 T 29-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS00325 db121987b61143f6599cb20683e058dc 456 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 5 450 33.823 T 29-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS00325 db121987b61143f6599cb20683e058dc 456 Pfam PF02875 Mur ligase family, glutamate ligase domain 319 395 4.3E-12 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CHH28_RS00325 db121987b61143f6599cb20683e058dc 456 Gene3D G3DSA:3.40.1190.10 95 313 1.2E-59 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CHH28_RS00325 db121987b61143f6599cb20683e058dc 456 Pfam PF08245 Mur ligase middle domain 110 297 4.3E-50 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CHH28_RS00325 db121987b61143f6599cb20683e058dc 456 SUPERFAMILY SSF53244 318 449 9.29E-37 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CHH28_RS00325 db121987b61143f6599cb20683e058dc 456 SUPERFAMILY SSF53623 106 313 1.44E-57 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CHH28_RS00325 db121987b61143f6599cb20683e058dc 456 Gene3D G3DSA:3.40.1390.10 5 94 1.6E-24 T 29-03-2018 CHH28_RS00325 db121987b61143f6599cb20683e058dc 456 Gene3D G3DSA:3.90.190.20 317 456 1.6E-45 T 29-03-2018 CHH28_RS05460 8ea0406ed261c204d05e935f95a2914a 927 PIRSF PIRSF001444 9 845 2.2E-200 T 29-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 CHH28_RS05460 8ea0406ed261c204d05e935f95a2914a 927 Pfam PF12633 Adenylate cyclase NT domain 12 205 3.5E-73 T 29-03-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 CHH28_RS05460 8ea0406ed261c204d05e935f95a2914a 927 Pfam PF01295 Adenylate cyclase, class-I 232 793 3.9E-107 T 29-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 CHH28_RS07935 5f8e1653c0783c1e3835420312852d0a 262 Pfam PF13276 HTH-like domain 25 78 1.7E-12 T 29-03-2018 IPR025948 HTH-like domain CHH28_RS07935 5f8e1653c0783c1e3835420312852d0a 262 SUPERFAMILY SSF53098 97 259 2.88E-42 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS07935 5f8e1653c0783c1e3835420312852d0a 262 Gene3D G3DSA:3.30.420.10 94 260 3.0E-40 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS07935 5f8e1653c0783c1e3835420312852d0a 262 Pfam PF00665 Integrase core domain 104 218 2.2E-30 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CHH28_RS07310 8336d654338e20a49203ed0ff5e6b0f8 184 SUPERFAMILY SSF51182 106 176 3.14E-6 T 29-03-2018 IPR011051 RmlC-like cupin domain CHH28_RS07310 8336d654338e20a49203ed0ff5e6b0f8 184 SUPERFAMILY SSF47413 4 69 9.92E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CHH28_RS07310 8336d654338e20a49203ed0ff5e6b0f8 184 Pfam PF01381 Helix-turn-helix 10 64 7.5E-12 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CHH28_RS07310 8336d654338e20a49203ed0ff5e6b0f8 184 Gene3D G3DSA:1.10.260.40 2 92 1.3E-14 T 29-03-2018 CHH28_RS07310 8336d654338e20a49203ed0ff5e6b0f8 184 SMART SM00530 9 64 6.3E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CHH28_RS17045 234a96452be5b5edeedfe7c0e4c2da3c 582 Pfam PF03929 PepSY-associated TM region 105 450 3.4E-49 T 29-03-2018 IPR005625 PepSY-associated TM protein CHH28_RS08180 18bad9c9bfa7ff4d25b369a88664b27b 389 SUPERFAMILY SSF52172 24 123 2.34E-5 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS08180 18bad9c9bfa7ff4d25b369a88664b27b 389 Gene3D G3DSA:3.40.50.2300 26 134 1.2E-7 T 29-03-2018 CHH28_RS01360 3ec37ee6577fed24407dc75fb01a6ca8 107 SUPERFAMILY SSF52821 3 105 1.05E-25 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS01360 3ec37ee6577fed24407dc75fb01a6ca8 107 Gene3D G3DSA:3.40.250.10 1 107 7.4E-25 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS01360 3ec37ee6577fed24407dc75fb01a6ca8 107 SMART SM00450 7 102 7.1E-18 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS01360 3ec37ee6577fed24407dc75fb01a6ca8 107 Pfam PF00581 Rhodanese-like domain 9 97 5.6E-14 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS01360 3ec37ee6577fed24407dc75fb01a6ca8 107 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 27.155 T 29-03-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CHH28_RS07485 f214a7cd24d02d8a121becf21c5a8ecb 171 SUPERFAMILY SSF55729 3 153 1.19E-33 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS07485 f214a7cd24d02d8a121becf21c5a8ecb 171 Gene3D G3DSA:3.40.630.30 4 170 2.9E-24 T 29-03-2018 CHH28_RS07485 f214a7cd24d02d8a121becf21c5a8ecb 171 Pfam PF13302 Acetyltransferase (GNAT) domain 9 149 8.4E-25 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS00715 e23f6d9f70e4fb91860588da5e12aaf6 146 Pfam PF01037 Lrp/AsnC ligand binding domain 72 141 1.4E-16 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CHH28_RS00715 e23f6d9f70e4fb91860588da5e12aaf6 146 Gene3D G3DSA:1.10.10.10 1 50 3.7E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS00715 e23f6d9f70e4fb91860588da5e12aaf6 146 SUPERFAMILY SSF54909 68 144 2.01E-15 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CHH28_RS00715 e23f6d9f70e4fb91860588da5e12aaf6 146 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 52 6.7E-14 T 29-03-2018 CHH28_RS00715 e23f6d9f70e4fb91860588da5e12aaf6 146 SMART SM00344 6 112 4.7E-20 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CHH28_RS00715 e23f6d9f70e4fb91860588da5e12aaf6 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 1.4E-12 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS00715 e23f6d9f70e4fb91860588da5e12aaf6 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 1.4E-12 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS00715 e23f6d9f70e4fb91860588da5e12aaf6 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 1.4E-12 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CHH28_RS00715 e23f6d9f70e4fb91860588da5e12aaf6 146 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CHH28_RS00715 e23f6d9f70e4fb91860588da5e12aaf6 146 Gene3D G3DSA:3.30.70.920 51 139 4.1E-16 T 29-03-2018 CHH28_RS00715 e23f6d9f70e4fb91860588da5e12aaf6 146 SUPERFAMILY SSF46785 5 88 1.54E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS01330 0ec4f2d2b5d730604a409017a97b6836 806 Pfam PF04453 Organic solvent tolerance protein 312 705 3.5E-72 T 29-03-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 CHH28_RS01330 0ec4f2d2b5d730604a409017a97b6836 806 Pfam PF03968 OstA-like protein 113 204 1.8E-6 T 29-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal CHH28_RS01330 0ec4f2d2b5d730604a409017a97b6836 806 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 10 782 17.731 T 29-03-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 CHH28_RS01330 0ec4f2d2b5d730604a409017a97b6836 806 Gene3D G3DSA:2.60.450.10 63 217 4.7E-13 T 29-03-2018 CHH28_RS12395 08a0bbfd16727df1beb8a031caa6f88a 386 SUPERFAMILY SSF51713 6 370 9.94E-160 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CHH28_RS12395 08a0bbfd16727df1beb8a031caa6f88a 386 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 17 373 4.3E-168 T 29-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CHH28_RS12395 08a0bbfd16727df1beb8a031caa6f88a 386 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 7 370 55.761 T 29-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CHH28_RS12395 08a0bbfd16727df1beb8a031caa6f88a 386 Pfam PF01702 Queuine tRNA-ribosyltransferase 135 367 1.9E-91 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CHH28_RS12395 08a0bbfd16727df1beb8a031caa6f88a 386 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 16 372 1.5E-160 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CHH28_RS12395 08a0bbfd16727df1beb8a031caa6f88a 386 Gene3D G3DSA:3.20.20.105 1 372 9.9E-160 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CHH28_RS13950 71ad2f54f00e1876c91af89ed290fadc 252 Pfam PF09836 Putative DNA-binding domain 6 94 1.8E-19 T 29-03-2018 IPR018640 Putative DNA-binding domain, bacteria CHH28_RS16820 edb1ea1ee65f41a1a241bb7e8f765747 408 Gene3D G3DSA:1.25.40.10 110 199 2.1E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS16820 edb1ea1ee65f41a1a241bb7e8f765747 408 Gene3D G3DSA:1.25.40.10 200 277 6.6E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS16820 edb1ea1ee65f41a1a241bb7e8f765747 408 SUPERFAMILY SSF48452 142 275 1.77E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS16820 edb1ea1ee65f41a1a241bb7e8f765747 408 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 110 3.1E-11 T 29-03-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI CHH28_RS05025 bee48ba380ec6cd6f87c78ff164f1fbb 407 Gene3D G3DSA:1.10.540.10 1 132 3.8E-33 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS05025 bee48ba380ec6cd6f87c78ff164f1fbb 407 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 129 1.5E-16 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS05025 bee48ba380ec6cd6f87c78ff164f1fbb 407 SUPERFAMILY SSF56645 1 259 3.4E-67 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CHH28_RS05025 bee48ba380ec6cd6f87c78ff164f1fbb 407 SUPERFAMILY SSF47203 245 396 1.77E-41 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS05025 bee48ba380ec6cd6f87c78ff164f1fbb 407 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 246 394 4.2E-34 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS05025 bee48ba380ec6cd6f87c78ff164f1fbb 407 Gene3D G3DSA:2.40.110.10 133 239 2.0E-31 T 29-03-2018 CHH28_RS05025 bee48ba380ec6cd6f87c78ff164f1fbb 407 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 234 1.2E-18 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CHH28_RS05025 bee48ba380ec6cd6f87c78ff164f1fbb 407 Gene3D G3DSA:1.20.140.10 240 407 3.4E-42 T 29-03-2018 CHH28_RS11155 e9364f47f58af1a94dbc0052ca3662c1 218 SUPERFAMILY SSF57863 73 136 2.88E-8 T 29-03-2018 CHH28_RS11155 e9364f47f58af1a94dbc0052ca3662c1 218 Pfam PF02565 Recombination protein O C terminal 73 208 1.7E-17 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CHH28_RS05685 c29d84387e7511207ecacca68046bec1 763 Pfam PF03150 Di-haem cytochrome c peroxidase 59 275 7.4E-31 T 29-03-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CHH28_RS05685 c29d84387e7511207ecacca68046bec1 763 Gene3D G3DSA:1.10.760.10 282 470 4.9E-11 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS05685 c29d84387e7511207ecacca68046bec1 763 Gene3D G3DSA:1.10.760.10 50 281 1.5E-27 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS05685 c29d84387e7511207ecacca68046bec1 763 Gene3D G3DSA:2.60.120.380 653 749 4.8E-5 T 29-03-2018 CHH28_RS05685 c29d84387e7511207ecacca68046bec1 763 SUPERFAMILY SSF46626 53 143 4.95E-21 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS05685 c29d84387e7511207ecacca68046bec1 763 SUPERFAMILY SSF46626 171 261 4.95E-21 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS05685 c29d84387e7511207ecacca68046bec1 763 SUPERFAMILY SSF46626 265 398 2.41E-20 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS05685 c29d84387e7511207ecacca68046bec1 763 SUPERFAMILY SSF46626 452 473 2.41E-20 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS05685 c29d84387e7511207ecacca68046bec1 763 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 664 729 3.5E-6 T 29-03-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial CHH28_RS14330 5537c71bd061311b21c10a1c8819d5bc 455 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 13 201 4.6E-44 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CHH28_RS14330 5537c71bd061311b21c10a1c8819d5bc 455 Gene3D G3DSA:3.30.160.110 116 146 9.7E-14 T 29-03-2018 CHH28_RS14330 5537c71bd061311b21c10a1c8819d5bc 455 Gene3D G3DSA:1.10.8.210 151 207 2.8E-9 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CHH28_RS14330 5537c71bd061311b21c10a1c8819d5bc 455 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 294 327 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CHH28_RS14330 5537c71bd061311b21c10a1c8819d5bc 455 SUPERFAMILY SSF75615 114 209 4.58E-19 T 29-03-2018 CHH28_RS14330 5537c71bd061311b21c10a1c8819d5bc 455 SUPERFAMILY SSF53790 211 454 5.89E-82 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CHH28_RS14330 5537c71bd061311b21c10a1c8819d5bc 455 Pfam PF13241 Putative NAD(P)-binding 12 115 5.0E-19 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CHH28_RS14330 5537c71bd061311b21c10a1c8819d5bc 455 Gene3D G3DSA:3.40.1010.10 213 338 3.3E-38 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CHH28_RS14330 5537c71bd061311b21c10a1c8819d5bc 455 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 216 425 4.6E-53 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CHH28_RS14330 5537c71bd061311b21c10a1c8819d5bc 455 Gene3D G3DSA:3.40.50.720 6 115 1.1E-16 T 29-03-2018 CHH28_RS14330 5537c71bd061311b21c10a1c8819d5bc 455 Pfam PF10414 Sirohaem synthase dimerisation region 152 205 3.8E-10 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CHH28_RS14330 5537c71bd061311b21c10a1c8819d5bc 455 Gene3D G3DSA:3.30.950.10 339 455 1.3E-41 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CHH28_RS14330 5537c71bd061311b21c10a1c8819d5bc 455 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 214 449 1.7E-91 T 29-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CHH28_RS14330 5537c71bd061311b21c10a1c8819d5bc 455 PIRSF PIRSF036426 2 455 2.0E-172 T 29-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CHH28_RS14330 5537c71bd061311b21c10a1c8819d5bc 455 SUPERFAMILY SSF51735 13 113 6.1E-10 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS09950 291b628153b143037dcd2516cbc3c264 119 Gene3D G3DSA:3.30.780.10 28 117 8.0E-20 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CHH28_RS09950 291b628153b143037dcd2516cbc3c264 119 SUPERFAMILY SSF55159 9 116 5.75E-29 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CHH28_RS09950 291b628153b143037dcd2516cbc3c264 119 PIRSF PIRSF037511 1 119 2.1E-39 T 29-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 CHH28_RS09950 291b628153b143037dcd2516cbc3c264 119 Pfam PF01253 Translation initiation factor SUI1 43 112 1.3E-18 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CHH28_RS09950 291b628153b143037dcd2516cbc3c264 119 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 10 119 1.1E-35 T 29-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 CHH28_RS16080 ddc7bf15a3e253420781f1dc828d5d27 244 Gene3D G3DSA:3.60.15.10 24 238 7.0E-23 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS16080 ddc7bf15a3e253420781f1dc828d5d27 244 SUPERFAMILY SSF56281 6 234 2.24E-32 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS16080 ddc7bf15a3e253420781f1dc828d5d27 244 Pfam PF00753 Metallo-beta-lactamase superfamily 30 218 2.6E-18 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS16080 ddc7bf15a3e253420781f1dc828d5d27 244 SMART SM00849 29 218 1.0E-9 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS07345 3633f17aeaa79729f31c2d258cce93af 221 SUPERFAMILY SSF55120 1 204 1.28E-44 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS07345 3633f17aeaa79729f31c2d258cce93af 221 Gene3D G3DSA:3.30.2350.10 1 219 4.4E-45 T 29-03-2018 CHH28_RS07345 3633f17aeaa79729f31c2d258cce93af 221 Pfam PF00849 RNA pseudouridylate synthase 1 155 1.1E-25 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS13720 fa8017d16ca9513d1b9a3614cbcfdd5b 270 PRINTS PR01021 OMPA domain signature 188 203 9.0E-7 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CHH28_RS13720 fa8017d16ca9513d1b9a3614cbcfdd5b 270 PRINTS PR01021 OMPA domain signature 158 180 9.0E-7 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CHH28_RS13720 fa8017d16ca9513d1b9a3614cbcfdd5b 270 PRINTS PR01021 OMPA domain signature 203 219 9.0E-7 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CHH28_RS13720 fa8017d16ca9513d1b9a3614cbcfdd5b 270 Pfam PF00691 OmpA family 158 247 1.3E-20 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS13720 fa8017d16ca9513d1b9a3614cbcfdd5b 270 SUPERFAMILY SSF103088 147 258 1.28E-26 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS13720 fa8017d16ca9513d1b9a3614cbcfdd5b 270 Gene3D G3DSA:3.30.1330.60 82 270 1.2E-28 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS16900 ded3d1b4f5a6ff56940fa0b89978b03d 156 Gene3D G3DSA:3.10.129.10 13 156 1.1E-19 T 29-03-2018 CHH28_RS16900 ded3d1b4f5a6ff56940fa0b89978b03d 156 Pfam PF14539 Domain of unknown function (DUF4442) 20 152 1.2E-19 T 29-03-2018 IPR027961 Protein of unknown function DUF4442 CHH28_RS16900 ded3d1b4f5a6ff56940fa0b89978b03d 156 SUPERFAMILY SSF54637 29 155 7.47E-23 T 29-03-2018 IPR029069 HotDog domain CHH28_RS08255 46ceb3f0b23cf12f47f67ef84312f38b 145 Pfam PF12680 SnoaL-like domain 26 115 8.9E-14 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CHH28_RS08255 46ceb3f0b23cf12f47f67ef84312f38b 145 Gene3D G3DSA:3.10.450.50 1 131 1.4E-21 T 29-03-2018 CHH28_RS08255 46ceb3f0b23cf12f47f67ef84312f38b 145 SUPERFAMILY SSF54427 1 130 1.54E-22 T 29-03-2018 IPR032710 NTF2-like domain CHH28_RS11935 62fb94c8beb6bcb1ade468c9ca2d74fd 120 Gene3D G3DSA:3.10.180.10 7 120 8.8E-15 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS11935 62fb94c8beb6bcb1ade468c9ca2d74fd 120 SUPERFAMILY SSF54593 1 118 6.46E-17 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS07970 92d1fd2123f1225dbe72362095654f51 305 SUPERFAMILY SSF52418 28 294 8.24E-93 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CHH28_RS07970 92d1fd2123f1225dbe72362095654f51 305 Pfam PF00591 Glycosyl transferase family, a/b domain 29 282 2.1E-97 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CHH28_RS07970 92d1fd2123f1225dbe72362095654f51 305 Gene3D G3DSA:3.40.1030.10 25 301 7.3E-99 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CHH28_RS07970 92d1fd2123f1225dbe72362095654f51 305 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 1 292 30.778 T 29-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CHH28_RS07970 92d1fd2123f1225dbe72362095654f51 305 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 1 290 7.0E-110 T 29-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CHH28_RS18880 9259a1a6f68a3ee285e480ace2646fbb 509 PRINTS PR00982 Lysyl-tRNA synthetase signature 211 227 5.1E-37 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CHH28_RS18880 9259a1a6f68a3ee285e480ace2646fbb 509 PRINTS PR00982 Lysyl-tRNA synthetase signature 389 405 5.1E-37 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CHH28_RS18880 9259a1a6f68a3ee285e480ace2646fbb 509 PRINTS PR00982 Lysyl-tRNA synthetase signature 195 205 5.1E-37 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CHH28_RS18880 9259a1a6f68a3ee285e480ace2646fbb 509 PRINTS PR00982 Lysyl-tRNA synthetase signature 240 253 5.1E-37 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CHH28_RS18880 9259a1a6f68a3ee285e480ace2646fbb 509 PRINTS PR00982 Lysyl-tRNA synthetase signature 258 275 5.1E-37 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CHH28_RS18880 9259a1a6f68a3ee285e480ace2646fbb 509 Gene3D G3DSA:3.30.930.10 168 509 2.5E-99 T 29-03-2018 CHH28_RS18880 9259a1a6f68a3ee285e480ace2646fbb 509 Gene3D G3DSA:2.40.50.140 13 151 5.1E-22 T 29-03-2018 CHH28_RS18880 9259a1a6f68a3ee285e480ace2646fbb 509 SUPERFAMILY SSF55681 158 505 1.44E-114 T 29-03-2018 CHH28_RS18880 9259a1a6f68a3ee285e480ace2646fbb 509 Pfam PF00152 tRNA synthetases class II (D, K and N) 158 504 2.1E-82 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS18880 9259a1a6f68a3ee285e480ace2646fbb 509 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 19 507 41.772 T 29-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CHH28_RS18880 9259a1a6f68a3ee285e480ace2646fbb 509 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 13 507 7.6E-194 T 29-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CHH28_RS18880 9259a1a6f68a3ee285e480ace2646fbb 509 SUPERFAMILY SSF50249 12 151 3.43E-24 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS07060 6c7989ff0ae77e6222f81d91312ac80f 133 Gene3D G3DSA:1.10.10.10 2 131 1.2E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS07060 6c7989ff0ae77e6222f81d91312ac80f 133 SUPERFAMILY SSF46785 4 111 7.4E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS07060 6c7989ff0ae77e6222f81d91312ac80f 133 Pfam PF01638 HxlR-like helix-turn-helix 16 99 6.6E-18 T 29-03-2018 IPR002577 Helix-turn-helix, HxlR type CHH28_RS17450 ed38327f0ce7368deff8a6a5a83b5431 67 Gene3D G3DSA:1.10.1660.20 6 54 5.1E-13 T 29-03-2018 CHH28_RS17450 ed38327f0ce7368deff8a6a5a83b5431 67 SUPERFAMILY SSF46955 5 46 6.13E-5 T 29-03-2018 IPR009061 Putative DNA-binding domain CHH28_RS16875 b10998f59b61dd18b3a99f41cb334c00 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 4.5E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS16875 b10998f59b61dd18b3a99f41cb334c00 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 4.5E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS16875 b10998f59b61dd18b3a99f41cb334c00 220 SUPERFAMILY SSF48498 84 184 2.22E-8 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CHH28_RS16875 b10998f59b61dd18b3a99f41cb334c00 220 Pfam PF13305 WHG domain 94 178 1.1E-7 T 29-03-2018 IPR025996 WHG domain CHH28_RS16875 b10998f59b61dd18b3a99f41cb334c00 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 62 5.3E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS16875 b10998f59b61dd18b3a99f41cb334c00 220 Gene3D G3DSA:1.10.260.40 40 69 3.9E-10 T 29-03-2018 CHH28_RS16875 b10998f59b61dd18b3a99f41cb334c00 220 Gene3D G3DSA:1.10.10.60 6 39 2.7E-10 T 29-03-2018 CHH28_RS16875 b10998f59b61dd18b3a99f41cb334c00 220 SUPERFAMILY SSF46689 14 89 2.72E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS16875 b10998f59b61dd18b3a99f41cb334c00 220 Gene3D G3DSA:1.10.357.10 70 204 8.3E-18 T 29-03-2018 CHH28_RS18650 4c354f1d65fbf8895971a924b246d3f2 251 SUPERFAMILY SSF50341 107 244 1.44E-11 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS18650 4c354f1d65fbf8895971a924b246d3f2 251 Pfam PF01584 CheW-like domain 110 243 6.3E-8 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS18650 4c354f1d65fbf8895971a924b246d3f2 251 PIRSF PIRSF020479 1 247 4.2E-47 T 29-03-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like CHH28_RS02505 4ca071bd385a3d5024c6eb892ee2cac4 249 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 1.2E-67 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CHH28_RS02505 4ca071bd385a3d5024c6eb892ee2cac4 249 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 6.9E-64 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CHH28_RS02505 4ca071bd385a3d5024c6eb892ee2cac4 249 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 240 17.863 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CHH28_RS02505 4ca071bd385a3d5024c6eb892ee2cac4 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 4.0E-46 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CHH28_RS02505 4ca071bd385a3d5024c6eb892ee2cac4 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 4.0E-46 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CHH28_RS02505 4ca071bd385a3d5024c6eb892ee2cac4 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 4.0E-46 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CHH28_RS02505 4ca071bd385a3d5024c6eb892ee2cac4 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 4.0E-46 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CHH28_RS00865 dcf3bb469f56c99474480b4c25b4824e 524 SUPERFAMILY SSF48173 199 476 3.4E-81 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CHH28_RS00865 dcf3bb469f56c99474480b4c25b4824e 524 Pfam PF00875 DNA photolyase 4 134 2.0E-17 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CHH28_RS00865 dcf3bb469f56c99474480b4c25b4824e 524 Gene3D G3DSA:1.10.579.10 296 476 6.1E-51 T 29-03-2018 CHH28_RS00865 dcf3bb469f56c99474480b4c25b4824e 524 Gene3D G3DSA:1.25.40.80 133 295 9.0E-24 T 29-03-2018 CHH28_RS00865 dcf3bb469f56c99474480b4c25b4824e 524 Gene3D G3DSA:3.40.50.620 1 132 1.4E-23 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS00865 dcf3bb469f56c99474480b4c25b4824e 524 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 324 336 - T 29-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CHH28_RS00865 dcf3bb469f56c99474480b4c25b4824e 524 Pfam PF03441 FAD binding domain of DNA photolyase 275 471 3.0E-56 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CHH28_RS00865 dcf3bb469f56c99474480b4c25b4824e 524 SUPERFAMILY SSF52425 3 173 9.29E-36 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 SUPERFAMILY SSF82866 787 1009 1.11E-55 T 29-03-2018 CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 SUPERFAMILY SSF82693 40 132 7.06E-17 T 29-03-2018 CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 Gene3D G3DSA:1.20.1640.10 265 489 1.0E-38 T 29-03-2018 CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 Gene3D G3DSA:1.20.1640.10 791 1008 9.2E-48 T 29-03-2018 CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 SUPERFAMILY SSF82693 551 648 1.26E-6 T 29-03-2018 CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 SUPERFAMILY SSF82866 289 486 3.66E-37 T 29-03-2018 CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 Pfam PF00873 AcrB/AcrD/AcrF family 5 1004 1.7E-199 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 SUPERFAMILY SSF82693 136 180 6.98E-14 T 29-03-2018 CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 SUPERFAMILY SSF82693 266 322 6.98E-14 T 29-03-2018 CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 Gene3D G3DSA:3.30.2090.10 179 264 2.0E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 Gene3D G3DSA:3.30.2090.10 701 790 1.4E-14 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 SUPERFAMILY SSF82714 182 263 2.62E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 Gene3D G3DSA:3.30.70.1430 550 658 2.0E-16 T 29-03-2018 CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.8E-27 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 7.8E-27 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 7.8E-27 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.8E-27 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 7.8E-27 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 7.8E-27 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 Gene3D G3DSA:3.30.70.1430 40 142 1.6E-18 T 29-03-2018 CHH28_RS16725 2b4200e2e04bfb893a88dad29e5e02c1 1014 SUPERFAMILY SSF82714 704 788 1.29E-11 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CHH28_RS18445 5241508701a7c038910dd0cab1ce9174 212 Pfam PF07238 PilZ domain 103 207 3.8E-10 T 29-03-2018 IPR009875 PilZ domain GO:0035438 CHH28_RS18445 5241508701a7c038910dd0cab1ce9174 212 Pfam PF12945 Flagellar protein YcgR 11 95 5.5E-13 T 29-03-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CHH28_RS18445 5241508701a7c038910dd0cab1ce9174 212 Gene3D G3DSA:2.40.10.220 105 211 1.3E-14 T 29-03-2018 CHH28_RS18445 5241508701a7c038910dd0cab1ce9174 212 Gene3D G3DSA:2.30.110.10 8 104 2.5E-15 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CHH28_RS18445 5241508701a7c038910dd0cab1ce9174 212 SUPERFAMILY SSF141371 108 210 2.35E-12 T 29-03-2018 CHH28_RS18445 5241508701a7c038910dd0cab1ce9174 212 SUPERFAMILY SSF141371 8 105 2.0E-14 T 29-03-2018 CHH28_RS16275 9faec0878f0a065f3532b845783f4cb9 749 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 420 431 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CHH28_RS16275 9faec0878f0a065f3532b845783f4cb9 749 Pfam PF12838 4Fe-4S dicluster domain 380 433 1.6E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CHH28_RS16275 9faec0878f0a065f3532b845783f4cb9 749 Gene3D G3DSA:1.20.1170.10 598 746 6.1E-4 T 29-03-2018 CHH28_RS16275 9faec0878f0a065f3532b845783f4cb9 749 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 589 187.522 T 29-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CHH28_RS16275 9faec0878f0a065f3532b845783f4cb9 749 Pfam PF13375 RnfC Barrel sandwich hybrid domain 9 110 2.3E-38 T 29-03-2018 IPR026902 RnfC Barrel sandwich hybrid domain CHH28_RS16275 9faec0878f0a065f3532b845783f4cb9 749 SUPERFAMILY SSF46548 339 450 2.09E-21 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CHH28_RS16275 9faec0878f0a065f3532b845783f4cb9 749 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 7 450 4.7E-183 T 29-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CHH28_RS16275 9faec0878f0a065f3532b845783f4cb9 749 SUPERFAMILY SSF142019 89 307 1.44E-60 T 29-03-2018 CHH28_RS16275 9faec0878f0a065f3532b845783f4cb9 749 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 288 2.6E-51 T 29-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CHH28_RS16275 9faec0878f0a065f3532b845783f4cb9 749 Pfam PF10531 SLBB domain 301 349 3.2E-10 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CHH28_RS16275 9faec0878f0a065f3532b845783f4cb9 749 Gene3D G3DSA:3.30.70.20 389 499 1.3E-15 T 29-03-2018 CHH28_RS16275 9faec0878f0a065f3532b845783f4cb9 749 Gene3D G3DSA:1.20.1480.30 504 591 0.19 T 29-03-2018 CHH28_RS16275 9faec0878f0a065f3532b845783f4cb9 749 Gene3D G3DSA:3.30.70.20 226 388 0.053 T 29-03-2018 CHH28_RS05875 d947e2569b58ec30191961bb16c0f6e7 114 PRINTS PR00332 Histidine triad family signature 94 104 1.5E-19 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CHH28_RS05875 d947e2569b58ec30191961bb16c0f6e7 114 PRINTS PR00332 Histidine triad family signature 6 22 1.5E-19 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CHH28_RS05875 d947e2569b58ec30191961bb16c0f6e7 114 PRINTS PR00332 Histidine triad family signature 27 45 1.5E-19 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CHH28_RS05875 d947e2569b58ec30191961bb16c0f6e7 114 SUPERFAMILY SSF54197 1 113 3.87E-41 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CHH28_RS05875 d947e2569b58ec30191961bb16c0f6e7 114 Gene3D G3DSA:3.30.428.10 6 113 3.9E-35 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CHH28_RS05875 d947e2569b58ec30191961bb16c0f6e7 114 ProSitePatterns PS00892 HIT domain signature. 87 105 - T 29-03-2018 IPR019808 Histidine triad, conserved site CHH28_RS05875 d947e2569b58ec30191961bb16c0f6e7 114 Pfam PF01230 HIT domain 12 108 8.3E-31 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CHH28_RS08425 a0544b4504a94b0a6b89a46e3ec4e344 303 SUPERFAMILY SSF52833 27 135 7.13E-5 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS08425 a0544b4504a94b0a6b89a46e3ec4e344 303 Pfam PF00578 AhpC/TSA family 174 295 8.8E-7 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CHH28_RS08425 a0544b4504a94b0a6b89a46e3ec4e344 303 SUPERFAMILY SSF52833 170 300 6.98E-15 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS08425 a0544b4504a94b0a6b89a46e3ec4e344 303 Gene3D G3DSA:3.40.30.10 18 162 1.8E-5 T 29-03-2018 CHH28_RS08425 a0544b4504a94b0a6b89a46e3ec4e344 303 Gene3D G3DSA:3.40.30.10 168 302 2.2E-13 T 29-03-2018 CHH28_RS07225 8acb59b72312c1018baf0cf04c389e8a 294 Pfam PF00487 Fatty acid desaturase 55 281 4.7E-31 T 29-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CHH28_RS03045 9f6da139853d5309255288ea22e7117f 283 Pfam PF08340 Domain of unknown function (DUF1732) 199 283 3.1E-35 T 29-03-2018 IPR013551 Domain of unknown function DUF1732 CHH28_RS03045 9f6da139853d5309255288ea22e7117f 283 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 283 3.5E-93 T 29-03-2018 IPR005229 Conserved hypothetical protein CHP00255 CHH28_RS03045 9f6da139853d5309255288ea22e7117f 283 Pfam PF03755 YicC-like family, N-terminal region 1 149 3.7E-42 T 29-03-2018 IPR013527 YicC-like, N-terminal CHH28_RS15875 c9d4fc1fecd5dad7ee2be7be85f3597e 365 ProSitePatterns PS01215 Mrp family signature. 207 223 - T 29-03-2018 IPR000808 Mrp, conserved site GO:0005524 CHH28_RS15875 c9d4fc1fecd5dad7ee2be7be85f3597e 365 Gene3D G3DSA:3.40.50.300 93 322 1.3E-65 T 29-03-2018 CHH28_RS15875 c9d4fc1fecd5dad7ee2be7be85f3597e 365 Pfam PF01883 Iron-sulfur cluster assembly protein 7 79 3.1E-8 T 29-03-2018 IPR002744 MIP18 family-like CHH28_RS15875 c9d4fc1fecd5dad7ee2be7be85f3597e 365 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 98 343 1.8E-99 T 29-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CHH28_RS15875 c9d4fc1fecd5dad7ee2be7be85f3597e 365 SUPERFAMILY SSF117916 3 92 8.5E-13 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CHH28_RS15875 c9d4fc1fecd5dad7ee2be7be85f3597e 365 SUPERFAMILY SSF52540 91 326 5.41E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS15875 c9d4fc1fecd5dad7ee2be7be85f3597e 365 Hamap MF_02040 Iron-sulfur cluster carrier protein. 94 344 36.72 T 29-03-2018 IPR019591 Mrp/NBP35 ATP-binding protein CHH28_RS15875 c9d4fc1fecd5dad7ee2be7be85f3597e 365 Gene3D G3DSA:3.30.300.130 2 92 1.3E-8 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CHH28_RS17895 6d14737df49c1446eaddd8455d4ea3f8 608 SUPERFAMILY SSF53822 461 602 3.81E-70 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CHH28_RS17895 6d14737df49c1446eaddd8455d4ea3f8 608 SUPERFAMILY SSF53822 257 433 3.81E-70 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CHH28_RS17895 6d14737df49c1446eaddd8455d4ea3f8 608 Pfam PF04348 LppC putative lipoprotein 64 599 2.7E-121 T 29-03-2018 IPR007443 Penicillin-binding protein activator LpoA CHH28_RS17895 6d14737df49c1446eaddd8455d4ea3f8 608 Gene3D G3DSA:3.40.50.2300 366 538 1.3E-24 T 29-03-2018 CHH28_RS17140 a53057bcc1ea7a8886c26cf2cfdb011c 252 Gene3D G3DSA:1.10.10.10 164 252 3.7E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17140 a53057bcc1ea7a8886c26cf2cfdb011c 252 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 191 207 5.5E-11 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CHH28_RS17140 a53057bcc1ea7a8886c26cf2cfdb011c 252 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 207 222 5.5E-11 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CHH28_RS17140 a53057bcc1ea7a8886c26cf2cfdb011c 252 Pfam PF00027 Cyclic nucleotide-binding domain 49 131 5.1E-15 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS17140 a53057bcc1ea7a8886c26cf2cfdb011c 252 SMART SM00100 28 146 1.1E-15 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS17140 a53057bcc1ea7a8886c26cf2cfdb011c 252 Gene3D G3DSA:2.60.120.10 26 163 8.3E-19 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS17140 a53057bcc1ea7a8886c26cf2cfdb011c 252 SUPERFAMILY SSF51206 21 160 1.22E-30 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CHH28_RS17140 a53057bcc1ea7a8886c26cf2cfdb011c 252 SUPERFAMILY SSF46785 163 243 6.81E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17140 a53057bcc1ea7a8886c26cf2cfdb011c 252 Pfam PF13545 Crp-like helix-turn-helix domain 166 240 2.8E-18 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CHH28_RS17140 a53057bcc1ea7a8886c26cf2cfdb011c 252 SMART SM00419 185 233 8.2E-14 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CHH28_RS02360 f27ff581526efc65dc6d740ec598f337 341 Gene3D G3DSA:3.40.640.10 2 247 7.5E-33 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS02360 f27ff581526efc65dc6d740ec598f337 341 PIRSF PIRSF038940 2 341 6.8E-142 T 29-03-2018 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 CHH28_RS02360 f27ff581526efc65dc6d740ec598f337 341 Pfam PF01212 Beta-eliminating lyase 5 293 2.2E-74 T 29-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 CHH28_RS02360 f27ff581526efc65dc6d740ec598f337 341 Gene3D G3DSA:3.90.1150.10 248 341 2.1E-18 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS02360 f27ff581526efc65dc6d740ec598f337 341 SUPERFAMILY SSF53383 4 339 2.64E-99 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS05405 8ab9ee1ce84cdb1dd3004f9370e34c5b 198 SUPERFAMILY SSF140478 26 176 4.71E-52 T 29-03-2018 IPR023353 LemA-like domain CHH28_RS05405 8ab9ee1ce84cdb1dd3004f9370e34c5b 198 Gene3D G3DSA:1.20.1440.20 14 198 7.8E-60 T 29-03-2018 CHH28_RS05405 8ab9ee1ce84cdb1dd3004f9370e34c5b 198 Pfam PF04011 LemA family 6 198 1.4E-66 T 29-03-2018 IPR007156 LemA CHH28_RS12860 d1f9dea4408851f66b13c41b7492db31 334 Gene3D G3DSA:1.10.10.60 233 279 1.8E-13 T 29-03-2018 CHH28_RS12860 d1f9dea4408851f66b13c41b7492db31 334 Pfam PF01965 DJ-1/PfpI family 25 185 6.0E-10 T 29-03-2018 IPR002818 DJ-1/PfpI CHH28_RS12860 d1f9dea4408851f66b13c41b7492db31 334 Gene3D G3DSA:3.40.50.880 9 232 8.7E-40 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS12860 d1f9dea4408851f66b13c41b7492db31 334 SUPERFAMILY SSF46689 224 275 1.71E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS12860 d1f9dea4408851f66b13c41b7492db31 334 Pfam PF12833 Helix-turn-helix domain 247 325 1.4E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS12860 d1f9dea4408851f66b13c41b7492db31 334 Gene3D G3DSA:1.10.10.60 280 331 3.6E-17 T 29-03-2018 CHH28_RS12860 d1f9dea4408851f66b13c41b7492db31 334 SMART SM00342 241 324 4.2E-31 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS12860 d1f9dea4408851f66b13c41b7492db31 334 SUPERFAMILY SSF46689 277 328 9.86E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS12860 d1f9dea4408851f66b13c41b7492db31 334 SUPERFAMILY SSF52317 10 201 1.07E-31 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS12105 25bc3c35772d3aa0b22cb4f6a1eec5d0 423 Pfam PF00487 Fatty acid desaturase 123 378 6.7E-28 T 29-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CHH28_RS17120 102923937fe7a66b3df6decc21caf654 189 Pfam PF05751 FixH 40 173 8.9E-24 T 29-03-2018 IPR008620 Nitrogen fixation protein FixH CHH28_RS18560 4a3ed9787bd3a6b8c7088443a03d4c0e 231 SUPERFAMILY SSF102114 48 141 9.81E-6 T 29-03-2018 CHH28_RS18560 4a3ed9787bd3a6b8c7088443a03d4c0e 231 PIRSF PIRSF000370 3 231 3.8E-33 T 29-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CHH28_RS18560 4a3ed9787bd3a6b8c7088443a03d4c0e 231 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 5 230 7.1E-89 T 29-03-2018 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CHH28_RS18560 4a3ed9787bd3a6b8c7088443a03d4c0e 231 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 5 231 31.01 T 29-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CHH28_RS18560 4a3ed9787bd3a6b8c7088443a03d4c0e 231 Gene3D G3DSA:3.20.20.70 25 168 7.3E-10 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS14140 83e881b81f58ee8261c4273709cdde61 262 Gene3D G3DSA:3.40.50.1820 2 255 8.7E-30 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS14140 83e881b81f58ee8261c4273709cdde61 262 SUPERFAMILY SSF53474 2 257 6.57E-32 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS14140 83e881b81f58ee8261c4273709cdde61 262 Pfam PF12697 Alpha/beta hydrolase family 9 250 1.7E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS05220 fbf6ac726edfa25f7dc128160bd9051c 229 Gene3D G3DSA:3.40.50.300 1 223 1.7E-64 T 29-03-2018 CHH28_RS05220 fbf6ac726edfa25f7dc128160bd9051c 229 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS05220 fbf6ac726edfa25f7dc128160bd9051c 229 SMART SM00382 27 214 2.3E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS05220 fbf6ac726edfa25f7dc128160bd9051c 229 SUPERFAMILY SSF52540 1 220 3.22E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS05220 fbf6ac726edfa25f7dc128160bd9051c 229 Pfam PF00005 ABC transporter 18 165 4.2E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS05220 fbf6ac726edfa25f7dc128160bd9051c 229 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.5E-86 T 29-03-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 CHH28_RS09840 9901e0df74901a2359e56e6442f5d16a 633 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 481 624 1.2E-43 T 29-03-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding CHH28_RS09840 9901e0df74901a2359e56e6442f5d16a 633 SMART SM00116 235 282 1.8E-8 T 29-03-2018 IPR000644 CBS domain CHH28_RS09840 9901e0df74901a2359e56e6442f5d16a 633 SMART SM00116 159 218 0.0019 T 29-03-2018 IPR000644 CBS domain CHH28_RS09840 9901e0df74901a2359e56e6442f5d16a 633 Gene3D G3DSA:2.60.120.10 1 127 5.5E-25 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS09840 9901e0df74901a2359e56e6442f5d16a 633 SUPERFAMILY SSF54631 146 279 2.02E-27 T 29-03-2018 CHH28_RS09840 9901e0df74901a2359e56e6442f5d16a 633 SMART SM00100 17 134 3.2E-12 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS09840 9901e0df74901a2359e56e6442f5d16a 633 Pfam PF00571 CBS domain 228 279 6.1E-10 T 29-03-2018 IPR000644 CBS domain CHH28_RS09840 9901e0df74901a2359e56e6442f5d16a 633 Pfam PF00571 CBS domain 154 216 1.2E-6 T 29-03-2018 IPR000644 CBS domain CHH28_RS09840 9901e0df74901a2359e56e6442f5d16a 633 Gene3D G3DSA:3.20.20.70 128 398 4.1E-28 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS09840 9901e0df74901a2359e56e6442f5d16a 633 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 6.7E-14 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS09840 9901e0df74901a2359e56e6442f5d16a 633 Pfam PF03445 Putative nucleotidyltransferase DUF294 307 444 3.4E-47 T 29-03-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 CHH28_RS09840 9901e0df74901a2359e56e6442f5d16a 633 SUPERFAMILY SSF51206 4 134 2.88E-27 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CHH28_RS10370 a3a6dbc770b019dfff279f6b077bb3f9 210 Pfam PF09414 RNA ligase 36 185 7.9E-26 T 29-03-2018 IPR021122 RNA ligase domain, REL/Rln2 CHH28_RS10370 a3a6dbc770b019dfff279f6b077bb3f9 210 SUPERFAMILY SSF56091 6 208 6.83E-36 T 29-03-2018 CHH28_RS14705 abd5beeb21cdd9573a262c94a7bd4002 128 Pfam PF05656 Protein of unknown function (DUF805) 11 122 1.8E-34 T 29-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 CHH28_RS15310 984b4784522bc0e6d5566c0a4f1150ee 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.6E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS15310 984b4784522bc0e6d5566c0a4f1150ee 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.6E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS15310 984b4784522bc0e6d5566c0a4f1150ee 257 Pfam PF07729 FCD domain 99 227 8.2E-20 T 29-03-2018 IPR011711 GntR, C-terminal CHH28_RS15310 984b4784522bc0e6d5566c0a4f1150ee 257 SUPERFAMILY SSF46785 8 76 6.58E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS15310 984b4784522bc0e6d5566c0a4f1150ee 257 SMART SM00895 99 228 9.6E-15 T 29-03-2018 IPR011711 GntR, C-terminal CHH28_RS15310 984b4784522bc0e6d5566c0a4f1150ee 257 SUPERFAMILY SSF48008 98 235 8.37E-23 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CHH28_RS15310 984b4784522bc0e6d5566c0a4f1150ee 257 Gene3D G3DSA:1.20.120.530 87 246 3.3E-22 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CHH28_RS15310 984b4784522bc0e6d5566c0a4f1150ee 257 Gene3D G3DSA:1.10.10.10 1 76 1.5E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS15310 984b4784522bc0e6d5566c0a4f1150ee 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 1.6E-24 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS15310 984b4784522bc0e6d5566c0a4f1150ee 257 SMART SM00345 15 74 5.8E-27 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS06040 8d111c250d1e68ddbafc4eda5c452c9f 111 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 6 108 1.5E-47 T 29-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06040 8d111c250d1e68ddbafc4eda5c452c9f 111 Gene3D G3DSA:3.90.470.10 1 111 8.9E-45 T 29-03-2018 CHH28_RS06040 8d111c250d1e68ddbafc4eda5c452c9f 111 SUPERFAMILY SSF54843 3 111 1.83E-43 T 29-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CHH28_RS06040 8d111c250d1e68ddbafc4eda5c452c9f 111 ProSitePatterns PS00464 Ribosomal protein L22 signature. 84 108 - T 29-03-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06040 8d111c250d1e68ddbafc4eda5c452c9f 111 Pfam PF00237 Ribosomal protein L22p/L17e 7 108 3.4E-37 T 29-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CHH28_RS06040 8d111c250d1e68ddbafc4eda5c452c9f 111 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 2 111 28.742 T 29-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS19165 3fa8abe2ffda5595c652153244698a81 218 Gene3D G3DSA:2.40.30.20 94 191 8.2E-32 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS19165 3fa8abe2ffda5595c652153244698a81 218 Gene3D G3DSA:2.40.30.20 1 89 5.3E-26 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS19165 3fa8abe2ffda5595c652153244698a81 218 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 196 3.5E-59 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS19165 3fa8abe2ffda5595c652153244698a81 218 SUPERFAMILY SSF63380 93 196 4.08E-29 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CHH28_RS19165 3fa8abe2ffda5595c652153244698a81 218 PIRSF PIRSF000498 1 211 3.5E-74 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS19165 3fa8abe2ffda5595c652153244698a81 218 Pfam PF00677 Lumazine binding domain 100 184 4.4E-22 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS19165 3fa8abe2ffda5595c652153244698a81 218 Pfam PF00677 Lumazine binding domain 3 87 5.0E-21 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS19165 3fa8abe2ffda5595c652153244698a81 218 SUPERFAMILY SSF63380 1 88 5.27E-25 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CHH28_RS09800 c0fa5228c83ec8b34e648e1d2476ba84 116 Pfam PF07238 PilZ domain 12 105 4.0E-7 T 29-03-2018 IPR009875 PilZ domain GO:0035438 CHH28_RS09800 c0fa5228c83ec8b34e648e1d2476ba84 116 Gene3D G3DSA:2.40.10.220 6 114 6.6E-12 T 29-03-2018 CHH28_RS09800 c0fa5228c83ec8b34e648e1d2476ba84 116 SUPERFAMILY SSF141371 8 108 6.67E-8 T 29-03-2018 CHH28_RS11680 0c20cd1bfa7f24c6558ddcaa794629ed 503 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 23 180 7.5E-47 T 29-03-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices CHH28_RS11680 0c20cd1bfa7f24c6558ddcaa794629ed 503 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 257 501 8.3E-106 T 29-03-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase CHH28_RS15655 17ecd9086401cd3b5fac3ecf49df0054 425 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 423 1.2E-232 T 29-03-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 CHH28_RS15655 17ecd9086401cd3b5fac3ecf49df0054 425 PRINTS PR00143 Citrate synthase signature 297 317 3.9E-54 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CHH28_RS15655 17ecd9086401cd3b5fac3ecf49df0054 425 PRINTS PR00143 Citrate synthase signature 166 179 3.9E-54 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CHH28_RS15655 17ecd9086401cd3b5fac3ecf49df0054 425 PRINTS PR00143 Citrate synthase signature 242 270 3.9E-54 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CHH28_RS15655 17ecd9086401cd3b5fac3ecf49df0054 425 PRINTS PR00143 Citrate synthase signature 220 235 3.9E-54 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CHH28_RS15655 17ecd9086401cd3b5fac3ecf49df0054 425 PRINTS PR00143 Citrate synthase signature 381 395 3.9E-54 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CHH28_RS15655 17ecd9086401cd3b5fac3ecf49df0054 425 PRINTS PR00143 Citrate synthase signature 361 377 3.9E-54 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CHH28_RS15655 17ecd9086401cd3b5fac3ecf49df0054 425 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 29-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CHH28_RS15655 17ecd9086401cd3b5fac3ecf49df0054 425 Gene3D G3DSA:1.10.580.10 54 302 1.9E-91 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain CHH28_RS15655 17ecd9086401cd3b5fac3ecf49df0054 425 PIRSF PIRSF001369 39 425 2.2E-171 T 29-03-2018 IPR024176 Citrate synthase, bacterial-type CHH28_RS15655 17ecd9086401cd3b5fac3ecf49df0054 425 Pfam PF00285 Citrate synthase, C-terminal domain 48 412 1.2E-133 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CHH28_RS15655 17ecd9086401cd3b5fac3ecf49df0054 425 SUPERFAMILY SSF48256 15 423 1.03E-164 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CHH28_RS15655 17ecd9086401cd3b5fac3ecf49df0054 425 Gene3D G3DSA:1.10.580.10 316 406 1.4E-8 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain CHH28_RS00810 c732d4daf8e711fec2dbf613e7fe5f62 368 Pfam PF13378 Enolase C-terminal domain-like 130 354 1.5E-44 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CHH28_RS00810 c732d4daf8e711fec2dbf613e7fe5f62 368 SUPERFAMILY SSF51604 94 362 1.31E-62 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CHH28_RS00810 c732d4daf8e711fec2dbf613e7fe5f62 368 SMART SM00922 126 230 1.3E-15 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CHH28_RS00810 c732d4daf8e711fec2dbf613e7fe5f62 368 Gene3D G3DSA:3.20.20.120 113 368 1.9E-48 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CHH28_RS00810 c732d4daf8e711fec2dbf613e7fe5f62 368 SUPERFAMILY SSF54826 2 108 7.07E-20 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS00810 c732d4daf8e711fec2dbf613e7fe5f62 368 Gene3D G3DSA:3.30.390.10 4 112 1.8E-21 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CHH28_RS00810 c732d4daf8e711fec2dbf613e7fe5f62 368 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 12 106 1.7E-10 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CHH28_RS18885 e3e7fefa36bced9636b8467cb055db3c 342 SUPERFAMILY SSF75620 3 341 1.31E-137 T 29-03-2018 CHH28_RS18885 e3e7fefa36bced9636b8467cb055db3c 342 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 222 238 - T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CHH28_RS18885 e3e7fefa36bced9636b8467cb055db3c 342 Gene3D G3DSA:1.20.58.410 1 100 9.3E-24 T 29-03-2018 CHH28_RS18885 e3e7fefa36bced9636b8467cb055db3c 342 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 342 39.245 T 29-03-2018 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 CHH28_RS18885 e3e7fefa36bced9636b8467cb055db3c 342 Gene3D G3DSA:3.30.160.20 203 285 1.1E-33 T 29-03-2018 CHH28_RS18885 e3e7fefa36bced9636b8467cb055db3c 342 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 340 5.0E-163 T 29-03-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CHH28_RS18885 e3e7fefa36bced9636b8467cb055db3c 342 Pfam PF00472 RF-1 domain 205 314 1.7E-40 T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CHH28_RS18885 e3e7fefa36bced9636b8467cb055db3c 342 SMART SM00937 62 172 1.1E-53 T 29-03-2018 IPR005139 Peptide chain release factor GO:0006415 CHH28_RS18885 e3e7fefa36bced9636b8467cb055db3c 342 Pfam PF03462 PCRF domain 9 197 4.8E-60 T 29-03-2018 IPR005139 Peptide chain release factor GO:0006415 CHH28_RS11255 59786b5ab8f300140d0ec54c68f9325e 290 Pfam PF00459 Inositol monophosphatase family 32 281 4.6E-27 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CHH28_RS11255 59786b5ab8f300140d0ec54c68f9325e 290 Gene3D G3DSA:3.40.190.80 177 290 1.4E-16 T 29-03-2018 CHH28_RS11255 59786b5ab8f300140d0ec54c68f9325e 290 Gene3D G3DSA:3.30.540.10 23 176 3.6E-19 T 29-03-2018 CHH28_RS11255 59786b5ab8f300140d0ec54c68f9325e 290 PRINTS PR00377 Inositol monophosphatase superfamily signature 69 89 3.8E-25 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CHH28_RS11255 59786b5ab8f300140d0ec54c68f9325e 290 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 229 3.8E-25 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CHH28_RS11255 59786b5ab8f300140d0ec54c68f9325e 290 PRINTS PR00377 Inositol monophosphatase superfamily signature 239 263 3.8E-25 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CHH28_RS11255 59786b5ab8f300140d0ec54c68f9325e 290 PRINTS PR00377 Inositol monophosphatase superfamily signature 161 184 3.8E-25 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CHH28_RS11255 59786b5ab8f300140d0ec54c68f9325e 290 PRINTS PR00377 Inositol monophosphatase superfamily signature 112 128 3.8E-25 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CHH28_RS11255 59786b5ab8f300140d0ec54c68f9325e 290 PRINTS PR00377 Inositol monophosphatase superfamily signature 91 107 3.8E-25 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CHH28_RS11255 59786b5ab8f300140d0ec54c68f9325e 290 SUPERFAMILY SSF56655 32 285 1.28E-39 T 29-03-2018 CHH28_RS07575 663fcb49957e95e2c3500de72bdd8a5f 168 Pfam PF00293 NUDIX domain 17 133 2.5E-17 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CHH28_RS07575 663fcb49957e95e2c3500de72bdd8a5f 168 Gene3D G3DSA:3.90.79.10 13 150 1.2E-20 T 29-03-2018 CHH28_RS07575 663fcb49957e95e2c3500de72bdd8a5f 168 SUPERFAMILY SSF55811 9 142 8.8E-24 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CHH28_RS10475 fae70d448a668ee4f7492f1bf069a951 256 Gene3D G3DSA:3.40.190.10 30 179 4.9E-22 T 29-03-2018 CHH28_RS10475 fae70d448a668ee4f7492f1bf069a951 256 Gene3D G3DSA:3.40.190.10 180 256 5.5E-6 T 29-03-2018 CHH28_RS10475 fae70d448a668ee4f7492f1bf069a951 256 SMART SM00062 38 256 3.0E-11 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS10475 fae70d448a668ee4f7492f1bf069a951 256 SUPERFAMILY SSF53850 39 255 2.17E-40 T 29-03-2018 CHH28_RS10475 fae70d448a668ee4f7492f1bf069a951 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 255 3.2E-30 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS03790 5c418cdc7b75f5ab0d2d4d3cd27dee1a 244 Gene3D G3DSA:3.40.50.10090 1 120 2.5E-23 T 29-03-2018 CHH28_RS03790 5c418cdc7b75f5ab0d2d4d3cd27dee1a 244 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 234 2.3E-31 T 29-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CHH28_RS03790 5c418cdc7b75f5ab0d2d4d3cd27dee1a 244 SUPERFAMILY SSF69618 1 237 2.62E-44 T 29-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CHH28_RS03790 5c418cdc7b75f5ab0d2d4d3cd27dee1a 244 Gene3D G3DSA:3.40.50.10090 122 240 5.5E-13 T 29-03-2018 CHH28_RS11770 b4e33e69e0825d84e54efd4dd68ef20b 256 PIRSF PIRSF005902 1 256 1.2E-55 T 29-03-2018 IPR001130 TatD family GO:0016788 CHH28_RS11770 b4e33e69e0825d84e54efd4dd68ef20b 256 Pfam PF01026 TatD related DNase 5 253 7.5E-56 T 29-03-2018 IPR001130 TatD family GO:0016788 CHH28_RS11770 b4e33e69e0825d84e54efd4dd68ef20b 256 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 127 137 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CHH28_RS11770 b4e33e69e0825d84e54efd4dd68ef20b 256 SUPERFAMILY SSF51556 4 253 1.89E-66 T 29-03-2018 IPR032466 Metal-dependent hydrolase CHH28_RS11770 b4e33e69e0825d84e54efd4dd68ef20b 256 Gene3D G3DSA:3.20.20.140 2 254 1.2E-63 T 29-03-2018 CHH28_RS19440 1ae9dac01fcf4c82b07bb4ad1945142f 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 1.0E-46 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CHH28_RS19440 1ae9dac01fcf4c82b07bb4ad1945142f 126 SUPERFAMILY SSF50692 1 116 2.73E-46 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CHH28_RS19440 1ae9dac01fcf4c82b07bb4ad1945142f 126 Pfam PF02261 Aspartate decarboxylase 1 114 5.0E-47 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CHH28_RS19440 1ae9dac01fcf4c82b07bb4ad1945142f 126 Gene3D G3DSA:2.40.40.20 1 117 4.0E-49 T 29-03-2018 CHH28_RS19440 1ae9dac01fcf4c82b07bb4ad1945142f 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 1.5E-45 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CHH28_RS19440 1ae9dac01fcf4c82b07bb4ad1945142f 126 PIRSF PIRSF006246 1 125 3.1E-49 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CHH28_RS19440 1ae9dac01fcf4c82b07bb4ad1945142f 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 65.407 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CHH28_RS06130 ed6070478a7286af8a6663ba1d5bbb13 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 29-03-2018 IPR018102 Ribosomal S11, conserved site CHH28_RS06130 ed6070478a7286af8a6663ba1d5bbb13 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 3.2E-56 T 29-03-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06130 ed6070478a7286af8a6663ba1d5bbb13 129 SUPERFAMILY SSF53137 14 129 9.16E-48 T 29-03-2018 CHH28_RS06130 ed6070478a7286af8a6663ba1d5bbb13 129 Gene3D G3DSA:3.30.420.80 5 129 2.5E-45 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CHH28_RS06130 ed6070478a7286af8a6663ba1d5bbb13 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 33.006 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CHH28_RS06130 ed6070478a7286af8a6663ba1d5bbb13 129 PIRSF PIRSF002131 1 129 3.6E-54 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CHH28_RS06130 ed6070478a7286af8a6663ba1d5bbb13 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-51 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CHH28_RS17290 5a8e3fdff21f9fbbbdc977121d9b4b7c 344 PIRSF PIRSF005508 1 343 2.4E-122 T 29-03-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CHH28_RS17290 5a8e3fdff21f9fbbbdc977121d9b4b7c 344 Pfam PF01758 Sodium Bile acid symporter family 46 240 7.0E-45 T 29-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CHH28_RS17290 5a8e3fdff21f9fbbbdc977121d9b4b7c 344 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 1 328 1.0E-118 T 29-03-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CHH28_RS15495 8758f014758b54b61fee665b65831001 420 SUPERFAMILY SSF53474 17 281 1.86E-34 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS15495 8758f014758b54b61fee665b65831001 420 Pfam PF00561 alpha/beta hydrolase fold 39 269 1.2E-15 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS15495 8758f014758b54b61fee665b65831001 420 Gene3D G3DSA:3.40.50.1820 11 283 2.2E-28 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS14600 57ba191ea7c2ff71a88e7bea33b3a26e 473 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 41 365 1.1E-45 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CHH28_RS16650 48c0df8aebfeb98312dab19937876318 286 Pfam PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain 175 282 1.0E-16 T 29-03-2018 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain GO:0046373|GO:0046556 CHH28_RS16650 48c0df8aebfeb98312dab19937876318 286 SUPERFAMILY SSF110221 178 282 7.32E-16 T 29-03-2018 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain GO:0046373|GO:0046556 CHH28_RS16650 48c0df8aebfeb98312dab19937876318 286 Gene3D G3DSA:2.80.10.50 146 285 8.1E-24 T 29-03-2018 CHH28_RS18600 b114b13c51e0ed860f654db5c99d1b8d 755 SUPERFAMILY SSF51998 222 739 3.66E-163 T 29-03-2018 CHH28_RS18600 b114b13c51e0ed860f654db5c99d1b8d 755 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 1.7E-11 T 29-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CHH28_RS18600 b114b13c51e0ed860f654db5c99d1b8d 755 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CHH28_RS18600 b114b13c51e0ed860f654db5c99d1b8d 755 Pfam PF03477 ATP cone domain 6 92 4.6E-16 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CHH28_RS18600 b114b13c51e0ed860f654db5c99d1b8d 755 SUPERFAMILY SSF48168 10 221 5.89E-72 T 29-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CHH28_RS18600 b114b13c51e0ed860f654db5c99d1b8d 755 Gene3D G3DSA:3.20.70.20 122 737 6.4E-147 T 29-03-2018 CHH28_RS18600 b114b13c51e0ed860f654db5c99d1b8d 755 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 730 3.9E-118 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CHH28_RS18600 b114b13c51e0ed860f654db5c99d1b8d 755 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 6.7E-37 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CHH28_RS18600 b114b13c51e0ed860f654db5c99d1b8d 755 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 6.7E-37 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CHH28_RS18600 b114b13c51e0ed860f654db5c99d1b8d 755 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 6.7E-37 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CHH28_RS18600 b114b13c51e0ed860f654db5c99d1b8d 755 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 6.7E-37 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CHH28_RS18600 b114b13c51e0ed860f654db5c99d1b8d 755 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 6.7E-37 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CHH28_RS18600 b114b13c51e0ed860f654db5c99d1b8d 755 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 6.7E-37 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CHH28_RS18600 b114b13c51e0ed860f654db5c99d1b8d 755 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 734 2.3E-173 T 29-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CHH28_RS13370 432692b7e6c0e2ef245059b1a1447a46 184 Gene3D G3DSA:3.40.630.30 99 157 3.6E-12 T 29-03-2018 CHH28_RS13370 432692b7e6c0e2ef245059b1a1447a46 184 SUPERFAMILY SSF55729 8 173 1.6E-28 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS13370 432692b7e6c0e2ef245059b1a1447a46 184 Gene3D G3DSA:3.40.630.30 5 98 3.9E-18 T 29-03-2018 CHH28_RS13370 432692b7e6c0e2ef245059b1a1447a46 184 Pfam PF00583 Acetyltransferase (GNAT) family 55 146 6.9E-19 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS04420 7924767ca05dc828b5070a6b5944b60b 128 SUPERFAMILY SSF55298 11 125 3.61E-31 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CHH28_RS04420 7924767ca05dc828b5070a6b5944b60b 128 Pfam PF01042 Endoribonuclease L-PSP 10 124 3.8E-26 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CHH28_RS04420 7924767ca05dc828b5070a6b5944b60b 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 29-03-2018 IPR019897 RidA, conserved site CHH28_RS04420 7924767ca05dc828b5070a6b5944b60b 128 Gene3D G3DSA:3.30.1330.40 3 128 4.0E-29 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CHH28_RS14115 9b6fdaddd702eb0c11bee241757dd3c0 388 Pfam PF00072 Response regulator receiver domain 5 104 2.2E-6 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS14115 9b6fdaddd702eb0c11bee241757dd3c0 388 SUPERFAMILY SSF52172 5 148 4.98E-15 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS14115 9b6fdaddd702eb0c11bee241757dd3c0 388 Gene3D G3DSA:3.60.40.10 148 386 1.6E-22 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CHH28_RS14115 9b6fdaddd702eb0c11bee241757dd3c0 388 SMART SM00331 168 385 2.9E-12 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CHH28_RS14115 9b6fdaddd702eb0c11bee241757dd3c0 388 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 195 385 1.6E-31 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CHH28_RS14115 9b6fdaddd702eb0c11bee241757dd3c0 388 Gene3D G3DSA:3.40.50.2300 2 147 2.9E-13 T 29-03-2018 CHH28_RS06375 a16fc0b835c9717200668812913ae01c 100 SUPERFAMILY SSF54909 1 84 5.37E-15 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CHH28_RS06375 a16fc0b835c9717200668812913ae01c 100 Gene3D G3DSA:3.30.70.100 1 99 1.2E-12 T 29-03-2018 CHH28_RS06375 a16fc0b835c9717200668812913ae01c 100 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 73 3.3E-8 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CHH28_RS02815 8e223fe951fe37068d36f0233a5dae66 334 SUPERFAMILY SSF143422 16 80 2.88E-21 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CHH28_RS02815 8e223fe951fe37068d36f0233a5dae66 334 SUPERFAMILY SSF143422 133 192 2.88E-21 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CHH28_RS02815 8e223fe951fe37068d36f0233a5dae66 334 Gene3D G3DSA:3.30.70.1290 5 194 6.2E-27 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CHH28_RS02815 8e223fe951fe37068d36f0233a5dae66 334 SMART SM01321 12 186 2.9E-4 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CHH28_RS16285 b7710873112d026380f4e1e2d444850f 221 Pfam PF04205 FMN-binding domain 108 196 2.8E-20 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CHH28_RS16285 b7710873112d026380f4e1e2d444850f 221 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 14 200 1.5E-55 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CHH28_RS16285 b7710873112d026380f4e1e2d444850f 221 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 5 200 25.152 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CHH28_RS16285 b7710873112d026380f4e1e2d444850f 221 PIRSF PIRSF006091 1 210 1.0E-69 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CHH28_RS16285 b7710873112d026380f4e1e2d444850f 221 SMART SM00900 108 198 1.5E-34 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CHH28_RS09390 59dee4779520baf3adbe011fb2b33dc8 306 SUPERFAMILY SSF55681 10 303 6.7E-67 T 29-03-2018 CHH28_RS09390 59dee4779520baf3adbe011fb2b33dc8 306 PRINTS PR00982 Lysyl-tRNA synthetase signature 27 37 5.2E-9 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CHH28_RS09390 59dee4779520baf3adbe011fb2b33dc8 306 PRINTS PR00982 Lysyl-tRNA synthetase signature 86 103 5.2E-9 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CHH28_RS09390 59dee4779520baf3adbe011fb2b33dc8 306 PRINTS PR00982 Lysyl-tRNA synthetase signature 196 212 5.2E-9 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CHH28_RS09390 59dee4779520baf3adbe011fb2b33dc8 306 PRINTS PR00982 Lysyl-tRNA synthetase signature 68 81 5.2E-9 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CHH28_RS09390 59dee4779520baf3adbe011fb2b33dc8 306 Pfam PF00152 tRNA synthetases class II (D, K and N) 10 301 5.8E-40 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CHH28_RS09390 59dee4779520baf3adbe011fb2b33dc8 306 Gene3D G3DSA:3.30.930.10 6 305 1.0E-59 T 29-03-2018 CHH28_RS09390 59dee4779520baf3adbe011fb2b33dc8 306 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 12 301 3.2E-104 T 29-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 CHH28_RS06590 84184f934e08fbdd757789a8d1f4e1af 69 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 30.16 T 29-03-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06590 84184f934e08fbdd757789a8d1f4e1af 69 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06590 84184f934e08fbdd757789a8d1f4e1af 69 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 1.4E-32 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06590 84184f934e08fbdd757789a8d1f4e1af 69 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.0E-22 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06590 84184f934e08fbdd757789a8d1f4e1af 69 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.0E-22 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06590 84184f934e08fbdd757789a8d1f4e1af 69 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.0E-22 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06590 84184f934e08fbdd757789a8d1f4e1af 69 SUPERFAMILY SSF143800 1 67 4.32E-28 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06590 84184f934e08fbdd757789a8d1f4e1af 69 Pfam PF01197 Ribosomal protein L31 1 65 2.5E-31 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS08000 831128adf28f342a67ac0a1d6bcfd452 263 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 263 163.198 T 29-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CHH28_RS08000 831128adf28f342a67ac0a1d6bcfd452 263 SUPERFAMILY SSF56276 113 175 1.26E-23 T 29-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 CHH28_RS08000 831128adf28f342a67ac0a1d6bcfd452 263 SUPERFAMILY SSF56276 42 85 1.26E-23 T 29-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 CHH28_RS08000 831128adf28f342a67ac0a1d6bcfd452 263 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 4 262 3.5E-144 T 29-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CHH28_RS08000 831128adf28f342a67ac0a1d6bcfd452 263 Pfam PF02675 S-adenosylmethionine decarboxylase 38 170 2.8E-32 T 29-03-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CHH28_RS08000 831128adf28f342a67ac0a1d6bcfd452 263 PIRSF PIRSF001356 1 263 1.9E-140 T 29-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CHH28_RS08000 831128adf28f342a67ac0a1d6bcfd452 263 Gene3D G3DSA:3.60.90.10 34 190 8.8E-45 T 29-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 CHH28_RS18450 912e4050d2192780b9bfb2f8f60e2df5 84 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 4 68 2.6E-30 T 29-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor CHH28_RS18450 912e4050d2192780b9bfb2f8f60e2df5 84 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 4.0E-16 T 29-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor CHH28_RS11750 30509445261394ac0bbbcb5b4f9aae75 254 Pfam PF12706 Beta-lactamase superfamily domain 43 224 2.7E-13 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS11750 30509445261394ac0bbbcb5b4f9aae75 254 SUPERFAMILY SSF56281 15 225 3.25E-23 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS11750 30509445261394ac0bbbcb5b4f9aae75 254 Gene3D G3DSA:3.60.15.10 12 245 9.0E-22 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS18740 9b8e7fe15d9bb3b35c27ffd2211f24e5 183 PRINTS PR00956 Flagellar motor switch protein FliN signature 120 136 5.7E-27 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CHH28_RS18740 9b8e7fe15d9bb3b35c27ffd2211f24e5 183 PRINTS PR00956 Flagellar motor switch protein FliN signature 149 164 5.7E-27 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CHH28_RS18740 9b8e7fe15d9bb3b35c27ffd2211f24e5 183 PRINTS PR00956 Flagellar motor switch protein FliN signature 136 149 5.7E-27 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CHH28_RS18740 9b8e7fe15d9bb3b35c27ffd2211f24e5 183 PRINTS PR00956 Flagellar motor switch protein FliN signature 103 119 5.7E-27 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CHH28_RS18740 9b8e7fe15d9bb3b35c27ffd2211f24e5 183 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 101 175 2.9E-33 T 29-03-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 CHH28_RS18740 9b8e7fe15d9bb3b35c27ffd2211f24e5 183 SUPERFAMILY SSF101801 101 181 8.24E-25 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CHH28_RS18740 9b8e7fe15d9bb3b35c27ffd2211f24e5 183 Gene3D G3DSA:2.30.330.10 89 183 1.4E-28 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CHH28_RS18740 9b8e7fe15d9bb3b35c27ffd2211f24e5 183 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 104 173 1.1E-23 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CHH28_RS08265 ff0073204f493aa390c93898a1d2eadf 493 Pfam PF00875 DNA photolyase 4 173 1.7E-42 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CHH28_RS08265 ff0073204f493aa390c93898a1d2eadf 493 Gene3D G3DSA:1.25.40.80 137 301 1.5E-35 T 29-03-2018 CHH28_RS08265 ff0073204f493aa390c93898a1d2eadf 493 Pfam PF03441 FAD binding domain of DNA photolyase 282 477 1.8E-77 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CHH28_RS08265 ff0073204f493aa390c93898a1d2eadf 493 SUPERFAMILY SSF48173 207 479 4.58E-97 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CHH28_RS08265 ff0073204f493aa390c93898a1d2eadf 493 SUPERFAMILY SSF52425 3 189 9.29E-48 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CHH28_RS08265 ff0073204f493aa390c93898a1d2eadf 493 PRINTS PR00147 DNA photolyase signature 355 373 1.1E-25 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CHH28_RS08265 ff0073204f493aa390c93898a1d2eadf 493 PRINTS PR00147 DNA photolyase signature 394 408 1.1E-25 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CHH28_RS08265 ff0073204f493aa390c93898a1d2eadf 493 PRINTS PR00147 DNA photolyase signature 148 164 1.1E-25 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CHH28_RS08265 ff0073204f493aa390c93898a1d2eadf 493 PRINTS PR00147 DNA photolyase signature 335 351 1.1E-25 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CHH28_RS08265 ff0073204f493aa390c93898a1d2eadf 493 Gene3D G3DSA:1.10.579.10 302 480 4.2E-67 T 29-03-2018 CHH28_RS08265 ff0073204f493aa390c93898a1d2eadf 493 Gene3D G3DSA:3.40.50.620 1 136 6.3E-34 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS09575 f53aa97331275323fdca86104a68d6d1 147 Gene3D G3DSA:3.10.50.40 2 147 1.6E-20 T 29-03-2018 CHH28_RS09575 f53aa97331275323fdca86104a68d6d1 147 SUPERFAMILY SSF54534 8 143 1.0E-34 T 29-03-2018 CHH28_RS09575 f53aa97331275323fdca86104a68d6d1 147 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 8 141 3.5E-15 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CHH28_RS17565 a357b472b2976f3ffc92a2dd9d1e43cf 446 Pfam PF11902 Protein of unknown function (DUF3422) 22 432 9.3E-156 T 29-03-2018 IPR021830 Protein of unknown function DUF3422 CHH28_RS17565 a357b472b2976f3ffc92a2dd9d1e43cf 446 Gene3D G3DSA:1.20.120.330 217 408 0.0016 T 29-03-2018 CHH28_RS16265 5a296c836944145a658bd4552a618f5a 193 PIRSF PIRSF006102 1 193 1.2E-62 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CHH28_RS16265 5a296c836944145a658bd4552a618f5a 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.077 T 29-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 CHH28_RS16265 5a296c836944145a658bd4552a618f5a 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 190 9.5E-61 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CHH28_RS16265 5a296c836944145a658bd4552a618f5a 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 2.2E-88 T 29-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 CHH28_RS10045 199fec0e4436e1a0e44c9bf5b392246f 357 Gene3D G3DSA:3.10.180.10 163 357 3.0E-56 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS10045 199fec0e4436e1a0e44c9bf5b392246f 357 SUPERFAMILY SSF54593 15 344 4.64E-67 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS10045 199fec0e4436e1a0e44c9bf5b392246f 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 16 151 4.6E-43 T 29-03-2018 CHH28_RS10045 199fec0e4436e1a0e44c9bf5b392246f 357 PIRSF PIRSF009283 7 357 1.7E-106 T 29-03-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 CHH28_RS10045 199fec0e4436e1a0e44c9bf5b392246f 357 Gene3D G3DSA:3.10.180.10 12 162 5.1E-14 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS10045 199fec0e4436e1a0e44c9bf5b392246f 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 167 311 9.2E-11 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CHH28_RS10045 199fec0e4436e1a0e44c9bf5b392246f 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 23 356 3.8E-116 T 29-03-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 CHH28_RS10200 41c0b330dff766a5bcb66b34d9e93fab 186 SUPERFAMILY SSF109854 6 166 4.76E-13 T 29-03-2018 IPR034660 DinB/YfiT-like putative metalloenzymes CHH28_RS10200 41c0b330dff766a5bcb66b34d9e93fab 186 Gene3D G3DSA:1.20.120.450 2 183 9.0E-10 T 29-03-2018 CHH28_RS10200 41c0b330dff766a5bcb66b34d9e93fab 186 Pfam PF05163 DinB family 3 180 3.9E-14 T 29-03-2018 IPR007837 DNA damage-inducible protein DinB CHH28_RS08150 1dc06ff3cbf8ae96b671f2e9549a758c 383 Gene3D G3DSA:3.90.350.10 173 310 5.8E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS08150 1dc06ff3cbf8ae96b671f2e9549a758c 383 SUPERFAMILY SSF53098 87 347 1.06E-28 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS08150 1dc06ff3cbf8ae96b671f2e9549a758c 383 Pfam PF01609 Transposase DDE domain 141 330 1.5E-23 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CHH28_RS08150 1dc06ff3cbf8ae96b671f2e9549a758c 383 Pfam PF14294 Domain of unknown function (DUF4372) 3 76 5.5E-27 T 29-03-2018 IPR025399 Domain of unknown function DUF4372 CHH28_RS19065 34597d66491217fd81c34a46834eed00 208 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 66 201 7.0E-54 T 29-03-2018 IPR019231 Protein of unknown function DUF2170 CHH28_RS00590 cfccb2352a148f977cc555d41477503a 160 Gene3D G3DSA:2.40.280.10 14 133 1.7E-43 T 29-03-2018 IPR023620 Small protein B CHH28_RS00590 cfccb2352a148f977cc555d41477503a 160 SUPERFAMILY SSF74982 9 138 2.62E-46 T 29-03-2018 IPR023620 Small protein B CHH28_RS00590 cfccb2352a148f977cc555d41477503a 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 1.0E-34 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 CHH28_RS00590 cfccb2352a148f977cc555d41477503a 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 3.9E-50 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 CHH28_RS00590 cfccb2352a148f977cc555d41477503a 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 29-03-2018 IPR020081 SsrA-binding protein, conserved site CHH28_RS00590 cfccb2352a148f977cc555d41477503a 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 65.343 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 CHH28_RS00590 cfccb2352a148f977cc555d41477503a 160 Pfam PF01668 SmpB protein 14 157 1.3E-54 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 CHH28_RS01670 7b645df222954bca479fc1b4f27262b0 172 Pfam PF01202 Shikimate kinase 12 168 7.2E-54 T 29-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CHH28_RS01670 7b645df222954bca479fc1b4f27262b0 172 SUPERFAMILY SSF52540 4 168 7.77E-33 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS01670 7b645df222954bca479fc1b4f27262b0 172 PRINTS PR01100 Shikimate kinase family signature 76 85 1.8E-25 T 29-03-2018 CHH28_RS01670 7b645df222954bca479fc1b4f27262b0 172 PRINTS PR01100 Shikimate kinase family signature 30 43 1.8E-25 T 29-03-2018 CHH28_RS01670 7b645df222954bca479fc1b4f27262b0 172 PRINTS PR01100 Shikimate kinase family signature 58 66 1.8E-25 T 29-03-2018 CHH28_RS01670 7b645df222954bca479fc1b4f27262b0 172 PRINTS PR01100 Shikimate kinase family signature 6 21 1.8E-25 T 29-03-2018 CHH28_RS01670 7b645df222954bca479fc1b4f27262b0 172 PRINTS PR01100 Shikimate kinase family signature 97 114 1.8E-25 T 29-03-2018 CHH28_RS01670 7b645df222954bca479fc1b4f27262b0 172 ProSitePatterns PS01128 Shikimate kinase signature. 59 84 - T 29-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CHH28_RS01670 7b645df222954bca479fc1b4f27262b0 172 Hamap MF_00109 Shikimate kinase [aroK]. 3 169 29.235 T 29-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CHH28_RS01670 7b645df222954bca479fc1b4f27262b0 172 Gene3D G3DSA:3.40.50.300 2 170 2.1E-33 T 29-03-2018 CHH28_RS05335 aac804bf21ade9cfa9f26d1a17efc2c4 395 SUPERFAMILY SSF160991 10 353 4.32E-48 T 29-03-2018 CHH28_RS05335 aac804bf21ade9cfa9f26d1a17efc2c4 395 Gene3D G3DSA:2.40.390.10 251 369 3.0E-21 T 29-03-2018 IPR024071 Protein of unknown function DUF917, C-terminal CHH28_RS05335 aac804bf21ade9cfa9f26d1a17efc2c4 395 Gene3D G3DSA:3.40.1610.10 8 239 8.6E-39 T 29-03-2018 IPR027479 Protein of unknown function DUF917, N-terminal CHH28_RS05335 aac804bf21ade9cfa9f26d1a17efc2c4 395 Pfam PF06032 Protein of unknown function (DUF917) 14 353 2.6E-49 T 29-03-2018 IPR010318 Protein of unknown function DUF917 CHH28_RS02050 67d0effc6bf660482e66ccd7b8ff64eb 312 Gene3D G3DSA:1.10.10.60 262 311 1.9E-6 T 29-03-2018 CHH28_RS02050 67d0effc6bf660482e66ccd7b8ff64eb 312 Gene3D G3DSA:1.10.10.60 192 261 8.9E-11 T 29-03-2018 CHH28_RS02050 67d0effc6bf660482e66ccd7b8ff64eb 312 Pfam PF12833 Helix-turn-helix domain 227 310 1.8E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS02050 67d0effc6bf660482e66ccd7b8ff64eb 312 SUPERFAMILY SSF46689 206 255 1.25E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS02050 67d0effc6bf660482e66ccd7b8ff64eb 312 SMART SM00342 221 308 1.6E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS09145 13f0f1af0ad8d4ce00e62d9b95a2369b 384 Gene3D G3DSA:3.40.50.2300 9 136 7.3E-6 T 29-03-2018 CHH28_RS09145 13f0f1af0ad8d4ce00e62d9b95a2369b 384 SUPERFAMILY SSF52172 17 123 5.29E-6 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS09145 13f0f1af0ad8d4ce00e62d9b95a2369b 384 Gene3D G3DSA:3.40.50.300 137 354 2.5E-16 T 29-03-2018 CHH28_RS09145 13f0f1af0ad8d4ce00e62d9b95a2369b 384 SUPERFAMILY SSF52540 137 350 9.49E-15 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS05560 76662d12f0bbe5f5fa3ed683b451c603 190 Gene3D G3DSA:3.90.1200.10 27 188 9.3E-6 T 29-03-2018 CHH28_RS05560 76662d12f0bbe5f5fa3ed683b451c603 190 Pfam PF10707 PhoP regulatory network protein YrbL 8 184 3.7E-35 T 29-03-2018 IPR019647 PhoP regulatory network protein YrbL CHH28_RS08410 62aed9d47beff77017212b2dac058484 826 Gene3D G3DSA:1.25.40.10 500 636 1.8E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS08410 62aed9d47beff77017212b2dac058484 826 Gene3D G3DSA:3.40.50.10070 200 332 4.0E-4 T 29-03-2018 CHH28_RS08410 62aed9d47beff77017212b2dac058484 826 SMART SM00862 22 97 2.9E-12 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS08410 62aed9d47beff77017212b2dac058484 826 SUPERFAMILY SSF48452 654 780 8.97E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS08410 62aed9d47beff77017212b2dac058484 826 Pfam PF00486 Transcriptional regulatory protein, C terminal 26 96 2.8E-16 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS08410 62aed9d47beff77017212b2dac058484 826 Gene3D G3DSA:1.25.40.10 637 802 1.5E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS08410 62aed9d47beff77017212b2dac058484 826 Gene3D G3DSA:1.25.40.10 347 497 5.7E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS08410 62aed9d47beff77017212b2dac058484 826 Gene3D G3DSA:1.10.10.10 1 104 2.8E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS08410 62aed9d47beff77017212b2dac058484 826 SUPERFAMILY SSF46894 3 97 3.12E-17 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CHH28_RS18495 7b8651d0ef0337c09818bc2bcd0c0a82 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 8.8E-20 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CHH28_RS18495 7b8651d0ef0337c09818bc2bcd0c0a82 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 8.8E-20 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CHH28_RS18495 7b8651d0ef0337c09818bc2bcd0c0a82 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 8.8E-20 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CHH28_RS18495 7b8651d0ef0337c09818bc2bcd0c0a82 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 8.8E-20 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CHH28_RS18495 7b8651d0ef0337c09818bc2bcd0c0a82 264 Gene3D G3DSA:3.90.230.10 3 262 2.9E-79 T 29-03-2018 CHH28_RS18495 7b8651d0ef0337c09818bc2bcd0c0a82 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CHH28_RS18495 7b8651d0ef0337c09818bc2bcd0c0a82 264 SUPERFAMILY SSF55920 5 255 2.09E-86 T 29-03-2018 IPR000994 Peptidase M24 CHH28_RS18495 7b8651d0ef0337c09818bc2bcd0c0a82 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 250 3.7E-89 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CHH28_RS18495 7b8651d0ef0337c09818bc2bcd0c0a82 264 Pfam PF00557 Metallopeptidase family M24 13 242 1.3E-50 T 29-03-2018 IPR000994 Peptidase M24 CHH28_RS18495 7b8651d0ef0337c09818bc2bcd0c0a82 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 37.822 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CHH28_RS18705 0206140b31b599e4205956f26cfb7717 406 Gene3D G3DSA:3.40.50.300 192 387 6.3E-16 T 29-03-2018 CHH28_RS18705 0206140b31b599e4205956f26cfb7717 406 SMART SM00382 194 370 5.4E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS18705 0206140b31b599e4205956f26cfb7717 406 Pfam PF00448 SRP54-type protein, GTPase domain 199 383 1.7E-34 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CHH28_RS18705 0206140b31b599e4205956f26cfb7717 406 SUPERFAMILY SSF52540 190 384 1.78E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS18705 0206140b31b599e4205956f26cfb7717 406 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 283 1.1E-66 T 29-03-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 CHH28_RS18705 0206140b31b599e4205956f26cfb7717 406 SMART SM00962 195 387 8.8E-37 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CHH28_RS07780 40976c78bec0728c50987b7fb2c9fcc3 325 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 238 1.3E-22 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CHH28_RS07780 40976c78bec0728c50987b7fb2c9fcc3 325 SUPERFAMILY SSF51735 1 319 9.45E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS07780 40976c78bec0728c50987b7fb2c9fcc3 325 Gene3D G3DSA:3.40.50.720 1 324 3.0E-35 T 29-03-2018 CHH28_RS15545 0c050ee8790107b766e9d0d246f5628d 277 Gene3D G3DSA:3.30.479.10 147 277 3.6E-24 T 29-03-2018 CHH28_RS15545 0c050ee8790107b766e9d0d246f5628d 277 Gene3D G3DSA:3.30.479.10 7 146 6.0E-25 T 29-03-2018 CHH28_RS15545 0c050ee8790107b766e9d0d246f5628d 277 SUPERFAMILY SSF55620 149 274 8.34E-28 T 29-03-2018 CHH28_RS15545 0c050ee8790107b766e9d0d246f5628d 277 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 26 134 3.0E-7 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CHH28_RS15545 0c050ee8790107b766e9d0d246f5628d 277 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 149 273 2.6E-6 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CHH28_RS15545 0c050ee8790107b766e9d0d246f5628d 277 SUPERFAMILY SSF55620 1 153 2.33E-26 T 29-03-2018 CHH28_RS04570 fa576e4f27d4407d30ff20c11271ab35 420 Gene3D G3DSA:1.10.10.10 33 325 2.7E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS16320 3140ddaf008e7624ecfc7d94b8dbb1e5 950 Gene3D G3DSA:2.170.130.10 125 259 1.3E-14 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS16320 3140ddaf008e7624ecfc7d94b8dbb1e5 950 Pfam PF00593 TonB dependent receptor 513 948 5.2E-37 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS16320 3140ddaf008e7624ecfc7d94b8dbb1e5 950 Pfam PF13715 CarboxypepD_reg-like domain 50 135 1.6E-8 T 29-03-2018 CHH28_RS16320 3140ddaf008e7624ecfc7d94b8dbb1e5 950 Gene3D G3DSA:2.40.170.20 269 948 7.3E-67 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS16320 3140ddaf008e7624ecfc7d94b8dbb1e5 950 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 130 948 9.8E-173 T 29-03-2018 IPR010104 Bacterial TonB-dependent receptor CHH28_RS16320 3140ddaf008e7624ecfc7d94b8dbb1e5 950 SUPERFAMILY SSF49452 46 124 3.14E-9 T 29-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 CHH28_RS16320 3140ddaf008e7624ecfc7d94b8dbb1e5 950 Pfam PF07715 TonB-dependent Receptor Plug Domain 156 253 3.6E-13 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS16320 3140ddaf008e7624ecfc7d94b8dbb1e5 950 SUPERFAMILY SSF56935 126 554 4.03E-88 T 29-03-2018 CHH28_RS16320 3140ddaf008e7624ecfc7d94b8dbb1e5 950 SUPERFAMILY SSF56935 586 948 4.03E-88 T 29-03-2018 CHH28_RS16320 3140ddaf008e7624ecfc7d94b8dbb1e5 950 Gene3D G3DSA:2.60.40.1120 48 124 1.5E-6 T 29-03-2018 CHH28_RS16935 d66e78fa2f249bc71ec044f3e7d8713c 420 Pfam PF00990 Diguanylate cyclase, GGDEF domain 251 410 5.0E-49 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS16935 d66e78fa2f249bc71ec044f3e7d8713c 420 SMART SM00267 239 414 2.6E-62 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS16935 d66e78fa2f249bc71ec044f3e7d8713c 420 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 247 413 6.0E-51 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS16935 d66e78fa2f249bc71ec044f3e7d8713c 420 Gene3D G3DSA:3.30.70.270 243 420 5.6E-56 T 29-03-2018 CHH28_RS16935 d66e78fa2f249bc71ec044f3e7d8713c 420 SUPERFAMILY SSF55073 255 413 1.06E-48 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS05660 c1b579a3cef2202932d625a72e3bdea7 260 Gene3D G3DSA:2.40.160.60 19 257 1.5E-5 T 29-03-2018 CHH28_RS05660 c1b579a3cef2202932d625a72e3bdea7 260 Pfam PF06629 MltA-interacting protein MipA 35 256 8.6E-28 T 29-03-2018 IPR010583 MltA-interacting MipA CHH28_RS00245 3c0bc8bdcab7cd30347d5aa8623d3313 278 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 1.4E-15 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS00245 3c0bc8bdcab7cd30347d5aa8623d3313 278 SUPERFAMILY SSF46785 3 72 6.16E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS00245 3c0bc8bdcab7cd30347d5aa8623d3313 278 Gene3D G3DSA:1.10.10.10 1 70 1.3E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS00245 3c0bc8bdcab7cd30347d5aa8623d3313 278 SMART SM00345 9 68 2.9E-15 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CHH28_RS08595 dee0f4828da48d828893a1474a4bf6d4 260 Gene3D G3DSA:3.60.110.10 1 259 6.1E-80 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CHH28_RS08595 dee0f4828da48d828893a1474a4bf6d4 260 SUPERFAMILY SSF56317 3 255 2.49E-81 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CHH28_RS08595 dee0f4828da48d828893a1474a4bf6d4 260 Pfam PF00795 Carbon-nitrogen hydrolase 5 246 1.7E-55 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CHH28_RS13020 f290d3c5cac45cb43af076824344eaa3 456 Gene3D G3DSA:3.40.309.10 243 435 5.4E-64 T 29-03-2018 CHH28_RS13020 f290d3c5cac45cb43af076824344eaa3 456 Pfam PF00171 Aldehyde dehydrogenase family 3 449 1.2E-132 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS13020 f290d3c5cac45cb43af076824344eaa3 456 SUPERFAMILY SSF53720 2 452 2.09E-135 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CHH28_RS13020 f290d3c5cac45cb43af076824344eaa3 456 Gene3D G3DSA:3.40.605.10 1 242 1.0E-68 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS09080 feface6374fea0e92f15a3f9e9fda06a 388 SUPERFAMILY SSF51695 261 298 1.67E-31 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CHH28_RS09080 feface6374fea0e92f15a3f9e9fda06a 388 SUPERFAMILY SSF51695 27 204 1.67E-31 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CHH28_RS09080 feface6374fea0e92f15a3f9e9fda06a 388 SUPERFAMILY SSF56436 322 385 6.3E-6 T 29-03-2018 IPR016187 C-type lectin fold CHH28_RS09080 feface6374fea0e92f15a3f9e9fda06a 388 Gene3D G3DSA:3.20.20.190 16 385 9.3E-25 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CHH28_RS09080 feface6374fea0e92f15a3f9e9fda06a 388 ProSitePatterns PS00615 C-type lectin domain signature. 295 317 - T 29-03-2018 IPR018378 C-type lectin, conserved site CHH28_RS10205 609ce502e6e3307a84d2edb3d2354474 908 SUPERFAMILY SSF82171 319 541 7.85E-11 T 29-03-2018 CHH28_RS10205 609ce502e6e3307a84d2edb3d2354474 908 SUPERFAMILY SSF82171 580 636 7.85E-11 T 29-03-2018 CHH28_RS10205 609ce502e6e3307a84d2edb3d2354474 908 Gene3D G3DSA:2.130.10.120 270 448 0.0021 T 29-03-2018 CHH28_RS10205 609ce502e6e3307a84d2edb3d2354474 908 Gene3D G3DSA:2.40.160.50 551 908 9.9E-14 T 29-03-2018 CHH28_RS10205 609ce502e6e3307a84d2edb3d2354474 908 Gene3D G3DSA:2.80.10.50 449 550 0.036 T 29-03-2018 CHH28_RS08260 b8031bcb69cb3ab0ee00ef874749b100 323 PRINTS PR00075 Fatty acid desaturase family 1 signature 116 145 1.6E-17 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CHH28_RS08260 b8031bcb69cb3ab0ee00ef874749b100 323 PRINTS PR00075 Fatty acid desaturase family 1 signature 33 53 1.6E-17 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CHH28_RS08260 b8031bcb69cb3ab0ee00ef874749b100 323 PRINTS PR00075 Fatty acid desaturase family 1 signature 78 98 1.6E-17 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CHH28_RS08260 b8031bcb69cb3ab0ee00ef874749b100 323 PRINTS PR00075 Fatty acid desaturase family 1 signature 211 232 1.6E-17 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CHH28_RS08260 b8031bcb69cb3ab0ee00ef874749b100 323 PRINTS PR00075 Fatty acid desaturase family 1 signature 254 268 1.6E-17 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CHH28_RS08260 b8031bcb69cb3ab0ee00ef874749b100 323 Pfam PF00487 Fatty acid desaturase 58 278 2.0E-18 T 29-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CHH28_RS07400 c8e1b9911486a0cf08894e0e625ed68d 314 Gene3D G3DSA:1.10.10.60 258 312 6.2E-10 T 29-03-2018 CHH28_RS07400 c8e1b9911486a0cf08894e0e625ed68d 314 SUPERFAMILY SSF51215 41 110 2.22E-5 T 29-03-2018 CHH28_RS07400 c8e1b9911486a0cf08894e0e625ed68d 314 SUPERFAMILY SSF51215 138 184 2.22E-5 T 29-03-2018 CHH28_RS07400 c8e1b9911486a0cf08894e0e625ed68d 314 Pfam PF12852 Cupin 3 184 1.6E-30 T 29-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain CHH28_RS07400 c8e1b9911486a0cf08894e0e625ed68d 314 SUPERFAMILY SSF46689 254 305 1.03E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS07400 c8e1b9911486a0cf08894e0e625ed68d 314 Gene3D G3DSA:2.60.120.280 4 187 8.4E-17 T 29-03-2018 CHH28_RS07400 c8e1b9911486a0cf08894e0e625ed68d 314 Gene3D G3DSA:1.10.10.60 196 257 2.0E-12 T 29-03-2018 CHH28_RS07400 c8e1b9911486a0cf08894e0e625ed68d 314 SMART SM00342 218 301 6.9E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS07400 c8e1b9911486a0cf08894e0e625ed68d 314 SUPERFAMILY SSF46689 201 253 2.42E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS07400 c8e1b9911486a0cf08894e0e625ed68d 314 Pfam PF12833 Helix-turn-helix domain 224 303 3.4E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS08395 f499d88986d5abf980885e0632142486 473 Pfam PF13533 Biotin-lipoyl like 72 117 2.8E-5 T 29-03-2018 CHH28_RS08395 f499d88986d5abf980885e0632142486 473 SUPERFAMILY SSF111369 198 274 2.09E-10 T 29-03-2018 CHH28_RS08395 f499d88986d5abf980885e0632142486 473 SUPERFAMILY SSF111369 57 115 2.09E-10 T 29-03-2018 CHH28_RS08395 f499d88986d5abf980885e0632142486 473 SUPERFAMILY SSF111369 144 169 2.09E-10 T 29-03-2018 CHH28_RS08395 f499d88986d5abf980885e0632142486 473 Gene3D G3DSA:1.20.1600.10 27 268 3.9E-12 T 29-03-2018 CHH28_RS16115 f60a480a9316d750a46fd636fee29b8c 235 SUPERFAMILY SSF53850 10 233 7.6E-31 T 29-03-2018 CHH28_RS16115 f60a480a9316d750a46fd636fee29b8c 235 Gene3D G3DSA:3.40.190.10 131 235 2.2E-5 T 29-03-2018 CHH28_RS16115 f60a480a9316d750a46fd636fee29b8c 235 Gene3D G3DSA:3.40.190.10 7 130 1.2E-12 T 29-03-2018 CHH28_RS16115 f60a480a9316d750a46fd636fee29b8c 235 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 233 1.4E-13 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS14610 5319b02e9da78e95b28fd4685e6f32e2 1384 Pfam PF14331 ImcF-related N-terminal domain 196 379 8.3E-38 T 29-03-2018 IPR025743 ImcF-related, N-terminal domain CHH28_RS19095 98aac993de2b20fd795cabe55c67b664 258 Gene3D G3DSA:2.60.40.10 145 254 1.8E-13 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS19095 98aac993de2b20fd795cabe55c67b664 258 Pfam PF07705 CARDB 151 252 1.8E-13 T 29-03-2018 IPR011635 CARDB domain CHH28_RS01640 56a47f19e8156fd08d128997b3a827c8 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.972 T 29-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CHH28_RS01640 56a47f19e8156fd08d128997b3a827c8 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 346 4.5E-145 T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CHH28_RS01640 56a47f19e8156fd08d128997b3a827c8 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CHH28_RS01640 56a47f19e8156fd08d128997b3a827c8 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 345 2.8E-139 T 29-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CHH28_RS01640 56a47f19e8156fd08d128997b3a827c8 354 SUPERFAMILY SSF51726 2 351 5.36E-126 T 29-03-2018 CHH28_RS01640 56a47f19e8156fd08d128997b3a827c8 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CHH28_RS01640 56a47f19e8156fd08d128997b3a827c8 354 Gene3D G3DSA:3.20.20.210 1 354 8.7E-113 T 29-03-2018 CHH28_RS17585 36d5d8832ed462e186685229c28744c0 110 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 109 5.4E-45 T 29-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CHH28_RS17585 36d5d8832ed462e186685229c28744c0 110 Pfam PF03960 ArsC family 7 109 5.1E-18 T 29-03-2018 IPR006660 Arsenate reductase-like CHH28_RS17585 36d5d8832ed462e186685229c28744c0 110 Gene3D G3DSA:3.40.30.10 1 110 4.9E-40 T 29-03-2018 CHH28_RS17585 36d5d8832ed462e186685229c28744c0 110 SUPERFAMILY SSF52833 4 109 2.28E-35 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS12830 1f258b72d058385dc6ab24a1fd3052bd 585 SMART SM00382 363 574 6.8E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS12830 1f258b72d058385dc6ab24a1fd3052bd 585 Pfam PF00664 ABC transporter transmembrane region 22 295 7.5E-45 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS12830 1f258b72d058385dc6ab24a1fd3052bd 585 Gene3D G3DSA:1.20.1560.10 2 326 5.0E-65 T 29-03-2018 CHH28_RS12830 1f258b72d058385dc6ab24a1fd3052bd 585 SUPERFAMILY SSF90123 8 328 3.14E-70 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS12830 1f258b72d058385dc6ab24a1fd3052bd 585 Gene3D G3DSA:3.40.50.300 327 578 8.4E-69 T 29-03-2018 CHH28_RS12830 1f258b72d058385dc6ab24a1fd3052bd 585 SUPERFAMILY SSF52540 334 572 1.03E-77 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS12830 1f258b72d058385dc6ab24a1fd3052bd 585 Pfam PF00005 ABC transporter 354 502 5.2E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS06695 4f4dc50a62bbb238441e9f68ac643175 146 SUPERFAMILY SSF55811 6 141 1.25E-21 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CHH28_RS06695 4f4dc50a62bbb238441e9f68ac643175 146 Pfam PF00293 NUDIX domain 19 130 6.3E-14 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CHH28_RS06695 4f4dc50a62bbb238441e9f68ac643175 146 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CHH28_RS06695 4f4dc50a62bbb238441e9f68ac643175 146 Gene3D G3DSA:3.90.79.10 4 145 1.8E-21 T 29-03-2018 CHH28_RS11945 86aa9207052dc4c78eba23df4d9567f6 298 Gene3D G3DSA:3.40.190.10 91 177 2.0E-7 T 29-03-2018 CHH28_RS11945 86aa9207052dc4c78eba23df4d9567f6 298 SUPERFAMILY SSF53850 92 288 1.48E-25 T 29-03-2018 CHH28_RS11945 86aa9207052dc4c78eba23df4d9567f6 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.3E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS11945 86aa9207052dc4c78eba23df4d9567f6 298 Gene3D G3DSA:1.10.10.10 1 88 2.9E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS11945 86aa9207052dc4c78eba23df4d9567f6 298 Gene3D G3DSA:3.40.190.10 178 264 4.8E-10 T 29-03-2018 CHH28_RS11945 86aa9207052dc4c78eba23df4d9567f6 298 Pfam PF03466 LysR substrate binding domain 91 288 3.2E-23 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS11945 86aa9207052dc4c78eba23df4d9567f6 298 SUPERFAMILY SSF46785 5 87 5.9E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS01210 b21d191394037ecfbfe08505b041e449 568 SMART SM00098 46 568 6.7E-43 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS01210 b21d191394037ecfbfe08505b041e449 568 SUPERFAMILY SSF53649 516 565 1.44E-104 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CHH28_RS01210 b21d191394037ecfbfe08505b041e449 568 SUPERFAMILY SSF53649 41 396 1.44E-104 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CHH28_RS01210 b21d191394037ecfbfe08505b041e449 568 Gene3D G3DSA:3.40.720.10 18 567 1.1E-114 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CHH28_RS01210 b21d191394037ecfbfe08505b041e449 568 PRINTS PR00113 Alkaline phosphatase signature 145 165 2.9E-34 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS01210 b21d191394037ecfbfe08505b041e449 568 PRINTS PR00113 Alkaline phosphatase signature 189 199 2.9E-34 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS01210 b21d191394037ecfbfe08505b041e449 568 PRINTS PR00113 Alkaline phosphatase signature 296 325 2.9E-34 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS01210 b21d191394037ecfbfe08505b041e449 568 PRINTS PR00113 Alkaline phosphatase signature 45 65 2.9E-34 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS01210 b21d191394037ecfbfe08505b041e449 568 Pfam PF00245 Alkaline phosphatase 46 565 1.5E-78 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS01210 b21d191394037ecfbfe08505b041e449 568 ProSitePatterns PS00123 Alkaline phosphatase active site. 108 116 - T 29-03-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CHH28_RS03400 b8bf1a82fc3cad6021560c8c8b7d7821 133 Pfam PF03994 Domain of Unknown Function (DUF350) 12 66 6.1E-12 T 29-03-2018 IPR007140 Protein of unknown function DUF350 CHH28_RS03400 b8bf1a82fc3cad6021560c8c8b7d7821 133 Pfam PF03994 Domain of Unknown Function (DUF350) 78 131 2.2E-10 T 29-03-2018 IPR007140 Protein of unknown function DUF350 CHH28_RS07840 a70f675d8485e62c4f232afd291d8344 126 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 10 114 1.7E-12 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CHH28_RS07840 a70f675d8485e62c4f232afd291d8344 126 SUPERFAMILY SSF69754 10 122 9.94E-21 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CHH28_RS07840 a70f675d8485e62c4f232afd291d8344 126 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 10 111 2.9E-16 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CHH28_RS07840 a70f675d8485e62c4f232afd291d8344 126 Gene3D G3DSA:3.30.160.100 7 118 1.3E-23 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CHH28_RS00395 f753838bf3f80c94c17ca54fcae0e95b 809 Gene3D G3DSA:3.40.50.970 55 286 3.9E-15 T 29-03-2018 CHH28_RS00395 f753838bf3f80c94c17ca54fcae0e95b 809 Gene3D G3DSA:3.40.50.970 287 412 1.0E-9 T 29-03-2018 CHH28_RS00395 f753838bf3f80c94c17ca54fcae0e95b 809 Pfam PF09364 XFP N-terminal domain 72 315 2.8E-9 T 29-03-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal CHH28_RS00395 f753838bf3f80c94c17ca54fcae0e95b 809 SUPERFAMILY SSF52518 91 371 1.01E-20 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CHH28_RS00395 f753838bf3f80c94c17ca54fcae0e95b 809 Gene3D G3DSA:3.40.50.970 413 631 2.1E-25 T 29-03-2018 CHH28_RS00395 f753838bf3f80c94c17ca54fcae0e95b 809 Gene3D G3DSA:3.40.50.920 636 791 2.0E-17 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CHH28_RS00395 f753838bf3f80c94c17ca54fcae0e95b 809 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 434 603 1.3E-43 T 29-03-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 CHH28_RS00395 f753838bf3f80c94c17ca54fcae0e95b 809 SUPERFAMILY SSF52518 424 620 7.06E-8 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CHH28_RS08660 767053ff0ab566952ef7baab9feb36db 265 SMART SM00382 29 236 4.0E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS08660 767053ff0ab566952ef7baab9feb36db 265 Gene3D G3DSA:3.40.50.300 1 255 1.0E-62 T 29-03-2018 CHH28_RS08660 767053ff0ab566952ef7baab9feb36db 265 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS08660 767053ff0ab566952ef7baab9feb36db 265 SUPERFAMILY SSF52540 3 232 2.05E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS08660 767053ff0ab566952ef7baab9feb36db 265 Pfam PF00005 ABC transporter 21 169 1.2E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS02125 7d9b15c892822284eae261e1e3195862 245 Gene3D G3DSA:1.20.910.10 1 242 7.5E-30 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CHH28_RS02125 7d9b15c892822284eae261e1e3195862 245 SUPERFAMILY SSF48613 6 228 1.75E-32 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CHH28_RS02125 7d9b15c892822284eae261e1e3195862 245 Pfam PF14518 Iron-containing redox enzyme 46 221 6.8E-28 T 29-03-2018 IPR028201 PqqC-like protein CHH28_RS02125 7d9b15c892822284eae261e1e3195862 245 SMART SM01236 74 183 3.1E-18 T 29-03-2018 CHH28_RS18870 ebb81d0c39406dc1420a761ac50d19bf 682 Gene3D G3DSA:1.25.40.10 77 190 1.2E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS18870 ebb81d0c39406dc1420a761ac50d19bf 682 Pfam PF13847 Methyltransferase domain 439 551 4.0E-18 T 29-03-2018 IPR025714 Methyltransferase domain CHH28_RS18870 ebb81d0c39406dc1420a761ac50d19bf 682 Gene3D G3DSA:1.25.40.10 12 76 0.087 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS18870 ebb81d0c39406dc1420a761ac50d19bf 682 SUPERFAMILY SSF48452 36 161 9.28E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS18870 ebb81d0c39406dc1420a761ac50d19bf 682 SUPERFAMILY SSF53335 390 630 3.5E-31 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS18870 ebb81d0c39406dc1420a761ac50d19bf 682 Gene3D G3DSA:3.40.50.150 381 575 3.2E-27 T 29-03-2018 CHH28_RS06900 4b213d02448d529eebd2321782921e23 147 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 1.0E-34 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06900 4b213d02448d529eebd2321782921e23 147 SUPERFAMILY SSF54995 1 101 7.19E-37 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06900 4b213d02448d529eebd2321782921e23 147 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 29-03-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 CHH28_RS06900 4b213d02448d529eebd2321782921e23 147 Gene3D G3DSA:3.30.70.60 1 98 7.9E-31 T 29-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CHH28_RS06900 4b213d02448d529eebd2321782921e23 147 Pfam PF01250 Ribosomal protein S6 3 91 5.7E-27 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06900 4b213d02448d529eebd2321782921e23 147 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.304 T 29-03-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CHH28_RS18580 64d180bfa01f1c9048cb3028834798df 495 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 250 3.0E-77 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CHH28_RS18580 64d180bfa01f1c9048cb3028834798df 495 SUPERFAMILY SSF53067 4 253 3.19E-94 T 29-03-2018 CHH28_RS18580 64d180bfa01f1c9048cb3028834798df 495 SUPERFAMILY SSF53067 253 492 8.88E-78 T 29-03-2018 CHH28_RS18580 64d180bfa01f1c9048cb3028834798df 495 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 447 1.2E-58 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CHH28_RS18580 64d180bfa01f1c9048cb3028834798df 495 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 491 1.5E-212 T 29-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CHH28_RS18580 64d180bfa01f1c9048cb3028834798df 495 Gene3D G3DSA:3.30.420.40 1 247 5.3E-85 T 29-03-2018 CHH28_RS18580 64d180bfa01f1c9048cb3028834798df 495 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CHH28_RS18580 64d180bfa01f1c9048cb3028834798df 495 Gene3D G3DSA:3.30.420.40 248 495 1.6E-73 T 29-03-2018 CHH28_RS18580 64d180bfa01f1c9048cb3028834798df 495 Hamap MF_00186 Glycerol kinase [glpK]. 2 494 53.806 T 29-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CHH28_RS18580 64d180bfa01f1c9048cb3028834798df 495 PIRSF PIRSF000538 2 495 6.0E-167 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CHH28_RS15880 5a91b6ed9e3f0496291c7a97369163bf 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 119 6.7E-12 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CHH28_RS15880 5a91b6ed9e3f0496291c7a97369163bf 134 Gene3D G3DSA:3.10.180.10 1 128 6.9E-22 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS15880 5a91b6ed9e3f0496291c7a97369163bf 134 SUPERFAMILY SSF54593 5 122 3.89E-25 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS11790 6d52c68e54cea5321a1e309ec047b103 225 SUPERFAMILY SSF53335 55 174 4.07E-21 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS11790 6d52c68e54cea5321a1e309ec047b103 225 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 84 151 3.4E-13 T 29-03-2018 CHH28_RS11790 6d52c68e54cea5321a1e309ec047b103 225 Gene3D G3DSA:3.40.50.150 34 217 8.9E-25 T 29-03-2018 CHH28_RS09530 a0d81fba8807c6a56b20d9f137a713ff 86 Gene3D G3DSA:2.40.50.100 20 85 1.9E-30 T 29-03-2018 CHH28_RS09530 a0d81fba8807c6a56b20d9f137a713ff 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 29-03-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS09530 a0d81fba8807c6a56b20d9f137a713ff 86 Pfam PF01016 Ribosomal L27 protein 2 82 5.5E-38 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS09530 a0d81fba8807c6a56b20d9f137a713ff 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.382 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS09530 a0d81fba8807c6a56b20d9f137a713ff 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.0E-36 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS09530 a0d81fba8807c6a56b20d9f137a713ff 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.0E-36 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS09530 a0d81fba8807c6a56b20d9f137a713ff 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.0E-36 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS09530 a0d81fba8807c6a56b20d9f137a713ff 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 4.0E-14 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS09530 a0d81fba8807c6a56b20d9f137a713ff 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 8.4E-40 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS09530 a0d81fba8807c6a56b20d9f137a713ff 86 SUPERFAMILY SSF110324 2 82 3.84E-33 T 29-03-2018 CHH28_RS03370 5a1a0e73efd96b1fb1ba895f93790503 284 Gene3D G3DSA:3.40.190.10 158 276 2.0E-8 T 29-03-2018 CHH28_RS03370 5a1a0e73efd96b1fb1ba895f93790503 284 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 63 274 2.3E-10 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS03370 5a1a0e73efd96b1fb1ba895f93790503 284 SUPERFAMILY SSF53850 56 274 3.09E-21 T 29-03-2018 CHH28_RS03370 5a1a0e73efd96b1fb1ba895f93790503 284 Gene3D G3DSA:3.40.190.10 47 157 0.0014 T 29-03-2018 CHH28_RS16180 8e6ffb86e62bae8c56698b858de7fee6 215 SUPERFAMILY SSF46689 13 84 2.17E-18 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS16180 8e6ffb86e62bae8c56698b858de7fee6 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 69 2.4E-16 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS16180 8e6ffb86e62bae8c56698b858de7fee6 215 Gene3D G3DSA:1.10.357.10 16 215 6.0E-34 T 29-03-2018 CHH28_RS16180 8e6ffb86e62bae8c56698b858de7fee6 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 2.8E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS16180 8e6ffb86e62bae8c56698b858de7fee6 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 2.8E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS10380 f66e54e09b8a2504b4d173e526ccd8ed 315 Gene3D G3DSA:1.10.10.60 91 179 1.3E-15 T 29-03-2018 CHH28_RS10380 f66e54e09b8a2504b4d173e526ccd8ed 315 SUPERFAMILY SSF46689 131 202 2.0E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS10380 f66e54e09b8a2504b4d173e526ccd8ed 315 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 144 157 4.9E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS10380 f66e54e09b8a2504b4d173e526ccd8ed 315 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 165 188 4.9E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS10380 f66e54e09b8a2504b4d173e526ccd8ed 315 Pfam PF00440 Bacterial regulatory proteins, tetR family 148 190 1.5E-15 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS10380 f66e54e09b8a2504b4d173e526ccd8ed 315 Gene3D G3DSA:1.10.10.60 180 241 3.4E-9 T 29-03-2018 CHH28_RS18360 49042e2cb02037f402e566cc449a689c 343 Gene3D G3DSA:1.10.10.60 214 286 0.066 T 29-03-2018 CHH28_RS18360 49042e2cb02037f402e566cc449a689c 343 SUPERFAMILY SSF46689 283 333 1.79E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS18360 49042e2cb02037f402e566cc449a689c 343 Gene3D G3DSA:1.10.10.60 287 343 8.5E-17 T 29-03-2018 CHH28_RS18360 49042e2cb02037f402e566cc449a689c 343 SMART SM00342 248 330 1.3E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS18360 49042e2cb02037f402e566cc449a689c 343 Pfam PF12833 Helix-turn-helix domain 256 331 2.8E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS18360 49042e2cb02037f402e566cc449a689c 343 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 204 5.5E-44 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS00755 4ad009e4fcb1b1fa3ac18dcf414335ad 446 Gene3D G3DSA:3.40.50.300 16 334 6.0E-55 T 29-03-2018 CHH28_RS00755 4ad009e4fcb1b1fa3ac18dcf414335ad 446 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 35 82 3.5E-5 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CHH28_RS00755 4ad009e4fcb1b1fa3ac18dcf414335ad 446 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 142 331 4.9E-42 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CHH28_RS00755 4ad009e4fcb1b1fa3ac18dcf414335ad 446 SUPERFAMILY SSF52540 86 348 2.89E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS02565 e054a19cd608f2e052695d82d16a337d 114 Pfam PF13302 Acetyltransferase (GNAT) domain 1 91 3.7E-12 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS02565 e054a19cd608f2e052695d82d16a337d 114 SUPERFAMILY SSF55729 1 89 1.83E-14 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS02565 e054a19cd608f2e052695d82d16a337d 114 Gene3D G3DSA:3.40.630.30 1 93 4.4E-10 T 29-03-2018 CHH28_RS00800 2b9bb567342c2e0c6ddde05969be9aaf 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.5E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS00800 2b9bb567342c2e0c6ddde05969be9aaf 301 Gene3D G3DSA:3.40.190.10 172 264 1.1E-7 T 29-03-2018 CHH28_RS00800 2b9bb567342c2e0c6ddde05969be9aaf 301 SUPERFAMILY SSF53850 93 297 6.21E-26 T 29-03-2018 CHH28_RS00800 2b9bb567342c2e0c6ddde05969be9aaf 301 Gene3D G3DSA:1.10.10.10 2 83 5.8E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS00800 2b9bb567342c2e0c6ddde05969be9aaf 301 Gene3D G3DSA:3.40.190.10 94 171 7.0E-12 T 29-03-2018 CHH28_RS00800 2b9bb567342c2e0c6ddde05969be9aaf 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.8E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS00800 2b9bb567342c2e0c6ddde05969be9aaf 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.8E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS00800 2b9bb567342c2e0c6ddde05969be9aaf 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.8E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS00800 2b9bb567342c2e0c6ddde05969be9aaf 301 Pfam PF03466 LysR substrate binding domain 92 291 1.3E-22 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS00800 2b9bb567342c2e0c6ddde05969be9aaf 301 SUPERFAMILY SSF46785 4 80 4.82E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS01615 2241d94ade81a3366ccc6bec9c84516f 89 PIRSF PIRSF028784 1 89 2.6E-25 T 29-03-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 CHH28_RS01615 2241d94ade81a3366ccc6bec9c84516f 89 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 32 82 3.6E-18 T 29-03-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 CHH28_RS00815 d5c32c9371655a2fa00fb12010997fb8 492 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CHH28_RS00815 d5c32c9371655a2fa00fb12010997fb8 492 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 289 300 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CHH28_RS00815 d5c32c9371655a2fa00fb12010997fb8 492 SUPERFAMILY SSF53720 10 491 4.06E-164 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CHH28_RS00815 d5c32c9371655a2fa00fb12010997fb8 492 Pfam PF00171 Aldehyde dehydrogenase family 28 488 3.0E-167 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS00815 d5c32c9371655a2fa00fb12010997fb8 492 Gene3D G3DSA:3.40.309.10 278 474 2.3E-63 T 29-03-2018 CHH28_RS00815 d5c32c9371655a2fa00fb12010997fb8 492 Gene3D G3DSA:3.40.605.10 5 277 1.3E-102 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS13120 485e8b876b97458d95692a7e1f92e279 262 SMART SM00849 13 176 2.5E-28 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS13120 485e8b876b97458d95692a7e1f92e279 262 SUPERFAMILY SSF56281 10 261 5.46E-57 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS13120 485e8b876b97458d95692a7e1f92e279 262 Pfam PF00753 Metallo-beta-lactamase superfamily 34 176 7.8E-10 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS13120 485e8b876b97458d95692a7e1f92e279 262 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 177 262 2.0E-16 T 29-03-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CHH28_RS13120 485e8b876b97458d95692a7e1f92e279 262 Gene3D G3DSA:3.60.15.10 7 262 1.2E-47 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS00710 e06a2938cbdb42e3b4f3a736edce5fd9 401 Gene3D G3DSA:3.40.640.10 45 286 1.1E-82 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS00710 e06a2938cbdb42e3b4f3a736edce5fd9 401 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 3 399 3.3E-216 T 29-03-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 CHH28_RS00710 e06a2938cbdb42e3b4f3a736edce5fd9 401 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 218 255 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS00710 e06a2938cbdb42e3b4f3a736edce5fd9 401 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 12 395 3.1E-145 T 29-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CHH28_RS00710 e06a2938cbdb42e3b4f3a736edce5fd9 401 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 9 396 44.265 T 29-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CHH28_RS00710 e06a2938cbdb42e3b4f3a736edce5fd9 401 Gene3D G3DSA:3.90.1150.10 287 401 1.2E-23 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS00710 e06a2938cbdb42e3b4f3a736edce5fd9 401 SUPERFAMILY SSF53383 11 396 7.58E-126 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS00710 e06a2938cbdb42e3b4f3a736edce5fd9 401 PIRSF PIRSF000521 162 398 1.7E-35 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS00710 e06a2938cbdb42e3b4f3a736edce5fd9 401 PIRSF PIRSF000521 12 151 8.9E-8 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS00710 e06a2938cbdb42e3b4f3a736edce5fd9 401 Pfam PF00202 Aminotransferase class-III 18 395 1.1E-125 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CHH28_RS08280 23c6279f23642050ac21109751e4d96d 123 Pfam PF01903 CbiX 9 114 3.2E-25 T 29-03-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 CHH28_RS08280 23c6279f23642050ac21109751e4d96d 123 Gene3D G3DSA:3.40.50.1400 1 108 2.1E-26 T 29-03-2018 CHH28_RS08280 23c6279f23642050ac21109751e4d96d 123 SUPERFAMILY SSF53800 2 119 8.63E-28 T 29-03-2018 CHH28_RS02240 72a78a65d146c5680007dbe496d371db 485 Gene3D G3DSA:3.40.190.10 1 419 3.0E-5 T 29-03-2018 CHH28_RS07475 0715cc68237642c737a7f5caa86af688 149 SUPERFAMILY SSF55729 23 144 3.43E-21 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS07475 0715cc68237642c737a7f5caa86af688 149 Gene3D G3DSA:3.40.630.30 1 146 1.1E-18 T 29-03-2018 CHH28_RS07475 0715cc68237642c737a7f5caa86af688 149 Pfam PF00583 Acetyltransferase (GNAT) family 38 138 2.3E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS14655 4193fe8b455813f25e925a502ff1af21 125 Pfam PF13665 Domain of unknown function (DUF4150) 10 111 3.2E-26 T 29-03-2018 IPR025425 Domain of unknown function DUF4150 CHH28_RS05570 996ad1af266368529d145271aa58a52b 278 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 4 273 3.8E-102 T 29-03-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 CHH28_RS05570 996ad1af266368529d145271aa58a52b 278 Pfam PF02219 Methylenetetrahydrofolate reductase 2 273 2.9E-91 T 29-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CHH28_RS05570 996ad1af266368529d145271aa58a52b 278 Gene3D G3DSA:3.20.20.220 1 278 6.7E-98 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like CHH28_RS05570 996ad1af266368529d145271aa58a52b 278 SUPERFAMILY SSF51730 3 274 1.45E-97 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like CHH28_RS16315 4c72cdae31d28c9533f34a79dc5d469a 298 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 161 289 2.0E-22 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS16315 4c72cdae31d28c9533f34a79dc5d469a 298 Gene3D G3DSA:3.30.70.270 139 296 5.0E-33 T 29-03-2018 CHH28_RS16315 4c72cdae31d28c9533f34a79dc5d469a 298 Pfam PF00990 Diguanylate cyclase, GGDEF domain 149 289 2.1E-29 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS16315 4c72cdae31d28c9533f34a79dc5d469a 298 SMART SM00267 135 296 1.4E-21 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS16315 4c72cdae31d28c9533f34a79dc5d469a 298 SUPERFAMILY SSF55073 164 290 3.53E-28 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS14240 e04121ba2a11c69ce79b4da40416abbc 91 Pfam PF00581 Rhodanese-like domain 7 77 2.0E-10 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS14240 e04121ba2a11c69ce79b4da40416abbc 91 SMART SM00450 1 88 4.0E-10 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS14240 e04121ba2a11c69ce79b4da40416abbc 91 Gene3D G3DSA:3.40.250.10 5 89 1.4E-20 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS14240 e04121ba2a11c69ce79b4da40416abbc 91 SUPERFAMILY SSF52821 5 78 1.7E-22 T 29-03-2018 IPR001763 Rhodanese-like domain CHH28_RS15300 a33a795264da730e864cf0135b3e2669 513 Gene3D G3DSA:3.40.50.10420 84 157 7.7E-9 T 29-03-2018 CHH28_RS15300 a33a795264da730e864cf0135b3e2669 513 Gene3D G3DSA:3.40.50.10420 158 310 2.6E-39 T 29-03-2018 CHH28_RS15300 a33a795264da730e864cf0135b3e2669 513 SUPERFAMILY SSF46548 307 416 1.01E-16 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CHH28_RS15300 a33a795264da730e864cf0135b3e2669 513 Pfam PF11870 Domain of unknown function (DUF3390) 412 495 1.4E-22 T 29-03-2018 IPR024569 4Fe-4S binding protein, C-terminal CHH28_RS15300 a33a795264da730e864cf0135b3e2669 513 Pfam PF13183 4Fe-4S dicluster domain 338 403 2.0E-10 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CHH28_RS15300 a33a795264da730e864cf0135b3e2669 513 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 339 350 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CHH28_RS15300 a33a795264da730e864cf0135b3e2669 513 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 38 417 6.9E-137 T 29-03-2018 IPR004452 4Fe-4S binding protein GO:0019516 CHH28_RS15300 a33a795264da730e864cf0135b3e2669 513 Pfam PF02589 LUD domain 90 320 8.2E-50 T 29-03-2018 IPR003741 LUD domain CHH28_RS15300 a33a795264da730e864cf0135b3e2669 513 SUPERFAMILY SSF100950 155 321 8.79E-39 T 29-03-2018 CHH28_RS15300 a33a795264da730e864cf0135b3e2669 513 SUPERFAMILY SSF100950 85 109 8.79E-39 T 29-03-2018 CHH28_RS15300 a33a795264da730e864cf0135b3e2669 513 Gene3D G3DSA:1.10.1060.10 311 425 8.9E-15 T 29-03-2018 CHH28_RS01345 e0a7293b2903388709d48609875abd82 270 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 39 66 - T 29-03-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CHH28_RS01345 e0a7293b2903388709d48609875abd82 270 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 7 262 58.797 T 29-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CHH28_RS01345 e0a7293b2903388709d48609875abd82 270 Pfam PF00398 Ribosomal RNA adenine dimethylase 7 260 8.4E-70 T 29-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CHH28_RS01345 e0a7293b2903388709d48609875abd82 270 SMART SM00650 23 195 1.7E-89 T 29-03-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CHH28_RS01345 e0a7293b2903388709d48609875abd82 270 Gene3D G3DSA:3.40.50.150 2 206 2.0E-60 T 29-03-2018 CHH28_RS01345 e0a7293b2903388709d48609875abd82 270 Gene3D G3DSA:1.10.8.100 207 267 1.5E-20 T 29-03-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 CHH28_RS01345 e0a7293b2903388709d48609875abd82 270 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 8 260 1.1E-86 T 29-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CHH28_RS01345 e0a7293b2903388709d48609875abd82 270 SUPERFAMILY SSF53335 5 262 2.59E-84 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS03735 b20d6cd2f8555bd269f8f03caee5d346 508 Gene3D G3DSA:1.20.200.10 199 506 3.9E-122 T 29-03-2018 CHH28_RS03735 b20d6cd2f8555bd269f8f03caee5d346 508 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 503 44.07 T 29-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CHH28_RS03735 b20d6cd2f8555bd269f8f03caee5d346 508 Gene3D G3DSA:1.10.275.10 2 197 1.5E-71 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CHH28_RS03735 b20d6cd2f8555bd269f8f03caee5d346 508 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 29-03-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 CHH28_RS03735 b20d6cd2f8555bd269f8f03caee5d346 508 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 504 1.3E-214 T 29-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CHH28_RS03735 b20d6cd2f8555bd269f8f03caee5d346 508 SUPERFAMILY SSF48557 4 498 8.63E-192 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CHH28_RS03735 b20d6cd2f8555bd269f8f03caee5d346 508 Pfam PF00221 Aromatic amino acid lyase 11 469 1.4E-185 T 29-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 CHH28_RS10660 cf5852b7868a6e258fe5bee066e6ac1a 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 31.611 T 29-03-2018 IPR003791 Protein of unknown function UPF0178 CHH28_RS10660 cf5852b7868a6e258fe5bee066e6ac1a 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 1.9E-51 T 29-03-2018 IPR003791 Protein of unknown function UPF0178 CHH28_RS03595 7d7bbf49706c1aa3146e88a34ca204e1 156 Pfam PF13586 Transposase DDE domain 68 154 1.2E-12 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS03595 7d7bbf49706c1aa3146e88a34ca204e1 156 Gene3D G3DSA:3.90.350.10 5 140 6.2E-6 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS11515 0a5bc9bb5445bd4901aef4fda95277c6 204 Hamap MF_00052_B Ribonuclease HII [rnhB]. 16 195 35.894 T 29-03-2018 IPR022898 Ribonuclease HII GO:0004523 CHH28_RS11515 0a5bc9bb5445bd4901aef4fda95277c6 204 SUPERFAMILY SSF53098 11 200 2.28E-67 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS11515 0a5bc9bb5445bd4901aef4fda95277c6 204 Gene3D G3DSA:3.30.420.10 2 204 7.7E-69 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS11515 0a5bc9bb5445bd4901aef4fda95277c6 204 Pfam PF01351 Ribonuclease HII 18 194 1.4E-38 T 29-03-2018 IPR024567 Ribonuclease HII/HIII domain CHH28_RS17610 5fbdf4a348f16e847c5c7e093f4c5269 375 Gene3D G3DSA:3.40.640.10 13 262 3.1E-27 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS17610 5fbdf4a348f16e847c5c7e093f4c5269 375 SUPERFAMILY SSF53383 10 373 2.84E-70 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS17610 5fbdf4a348f16e847c5c7e093f4c5269 375 Pfam PF00266 Aminotransferase class-V 22 293 1.2E-15 T 29-03-2018 IPR000192 Aminotransferase class V domain CHH28_RS17610 5fbdf4a348f16e847c5c7e093f4c5269 375 Gene3D G3DSA:3.90.1150.10 263 375 8.9E-18 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS17610 5fbdf4a348f16e847c5c7e093f4c5269 375 PIRSF PIRSF000524 18 375 7.3E-40 T 29-03-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 CHH28_RS09265 47826652b917a44d4e2489df8fe8ce1a 527 SMART SM00283 258 526 3.2E-45 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS09265 47826652b917a44d4e2489df8fe8ce1a 527 Gene3D G3DSA:1.10.287.1060 227 304 8.3E-5 T 29-03-2018 CHH28_RS09265 47826652b917a44d4e2489df8fe8ce1a 527 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 8.0E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS09265 47826652b917a44d4e2489df8fe8ce1a 527 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 8.0E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS09265 47826652b917a44d4e2489df8fe8ce1a 527 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 8.0E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS09265 47826652b917a44d4e2489df8fe8ce1a 527 Gene3D G3DSA:1.10.287.950 305 527 4.5E-46 T 29-03-2018 CHH28_RS09265 47826652b917a44d4e2489df8fe8ce1a 527 Gene3D G3DSA:1.20.120.570 63 177 0.097 T 29-03-2018 CHH28_RS09265 47826652b917a44d4e2489df8fe8ce1a 527 SUPERFAMILY SSF58104 218 527 5.89E-62 T 29-03-2018 CHH28_RS09265 47826652b917a44d4e2489df8fe8ce1a 527 SMART SM00304 197 250 0.0025 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS09265 47826652b917a44d4e2489df8fe8ce1a 527 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 337 489 1.9E-36 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 PRINTS PR00834 HtrA/DegQ protease family signature 116 136 3.2E-51 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 PRINTS PR00834 HtrA/DegQ protease family signature 190 207 3.2E-51 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 PRINTS PR00834 HtrA/DegQ protease family signature 212 229 3.2E-51 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 PRINTS PR00834 HtrA/DegQ protease family signature 95 107 3.2E-51 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 PRINTS PR00834 HtrA/DegQ protease family signature 156 180 3.2E-51 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 PRINTS PR00834 HtrA/DegQ protease family signature 298 310 3.2E-51 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 SUPERFAMILY SSF50494 27 250 5.92E-71 T 29-03-2018 IPR009003 Peptidase S1, PA clan CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 Pfam PF13180 PDZ domain 258 348 6.5E-19 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 Pfam PF13180 PDZ domain 373 450 5.4E-8 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 SMART SM00228 258 340 2.7E-11 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 SMART SM00228 372 449 8.1E-7 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 Gene3D G3DSA:2.40.10.10 157 258 3.3E-41 T 29-03-2018 CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 SUPERFAMILY SSF50156 216 341 1.31E-23 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 Pfam PF13365 Trypsin-like peptidase domain 86 219 8.6E-36 T 29-03-2018 CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 Gene3D G3DSA:2.30.42.10 371 460 1.0E-13 T 29-03-2018 CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 28 454 7.7E-159 T 29-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 SUPERFAMILY SSF50156 371 458 6.57E-13 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 Gene3D G3DSA:2.40.10.10 25 156 4.6E-40 T 29-03-2018 CHH28_RS11130 d1ba0253f9c53700f9efd072a68ff942 460 Gene3D G3DSA:2.30.42.10 259 360 5.9E-26 T 29-03-2018 CHH28_RS11830 855d2a1672c530a6bd35b9ac73da189a 259 Pfam PF03575 Peptidase family S51 8 226 2.4E-6 T 29-03-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 CHH28_RS11830 855d2a1672c530a6bd35b9ac73da189a 259 Gene3D G3DSA:3.40.50.880 6 255 9.8E-34 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS11830 855d2a1672c530a6bd35b9ac73da189a 259 SUPERFAMILY SSF52317 8 232 3.78E-7 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS18605 0ac9ddeef3dd22a53c019bf3dec7b562 377 Pfam PF00268 Ribonucleotide reductase, small chain 32 333 1.0E-48 T 29-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CHH28_RS18605 0ac9ddeef3dd22a53c019bf3dec7b562 377 Gene3D G3DSA:1.10.620.20 1 347 8.1E-110 T 29-03-2018 CHH28_RS18605 0ac9ddeef3dd22a53c019bf3dec7b562 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 29-03-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CHH28_RS18605 0ac9ddeef3dd22a53c019bf3dec7b562 377 SUPERFAMILY SSF47240 3 342 1.38E-108 T 29-03-2018 IPR009078 Ferritin-like superfamily CHH28_RS09025 75b0e5eb220568f45c82b29a7839d58b 543 Gene3D G3DSA:3.40.50.980 9 187 2.6E-33 T 29-03-2018 CHH28_RS09025 75b0e5eb220568f45c82b29a7839d58b 543 Gene3D G3DSA:3.40.50.980 188 347 2.1E-37 T 29-03-2018 CHH28_RS09025 75b0e5eb220568f45c82b29a7839d58b 543 Pfam PF00501 AMP-binding enzyme 18 439 1.1E-87 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CHH28_RS09025 75b0e5eb220568f45c82b29a7839d58b 543 Gene3D G3DSA:3.30.300.30 433 538 3.4E-23 T 29-03-2018 CHH28_RS09025 75b0e5eb220568f45c82b29a7839d58b 543 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 29-03-2018 IPR020845 AMP-binding, conserved site CHH28_RS09025 75b0e5eb220568f45c82b29a7839d58b 543 SUPERFAMILY SSF56801 9 536 1.83E-132 T 29-03-2018 CHH28_RS09025 75b0e5eb220568f45c82b29a7839d58b 543 Gene3D G3DSA:2.30.38.10 360 432 2.2E-16 T 29-03-2018 CHH28_RS09025 75b0e5eb220568f45c82b29a7839d58b 543 Pfam PF13193 AMP-binding enzyme C-terminal domain 449 523 5.8E-17 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CHH28_RS17995 7ae565a48b35622f64a5f0b6a0b18d08 289 SUPERFAMILY SSF103481 37 133 2.35E-10 T 29-03-2018 CHH28_RS17995 7ae565a48b35622f64a5f0b6a0b18d08 289 SUPERFAMILY SSF103481 174 274 2.88E-9 T 29-03-2018 CHH28_RS17995 7ae565a48b35622f64a5f0b6a0b18d08 289 Pfam PF00892 EamA-like transporter family 139 271 3.2E-13 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS17995 7ae565a48b35622f64a5f0b6a0b18d08 289 Pfam PF00892 EamA-like transporter family 3 129 3.6E-17 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS08940 8f913bf8e330ead360bc2947e6b88920 237 Pfam PF04116 Fatty acid hydroxylase superfamily 77 210 3.3E-23 T 29-03-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 CHH28_RS04085 800db4b297febc66c407409de36b73db 187 Gene3D G3DSA:3.40.630.30 2 147 9.9E-22 T 29-03-2018 CHH28_RS04085 800db4b297febc66c407409de36b73db 187 Pfam PF00583 Acetyltransferase (GNAT) family 22 127 5.9E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS04085 800db4b297febc66c407409de36b73db 187 SUPERFAMILY SSF55729 1 134 1.49E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS03095 0f86e255da269f907100c0458f6578be 264 Pfam PF00303 Thymidylate synthase 2 264 4.3E-126 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CHH28_RS03095 0f86e255da269f907100c0458f6578be 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 8.0E-49 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CHH28_RS03095 0f86e255da269f907100c0458f6578be 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 8.0E-49 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CHH28_RS03095 0f86e255da269f907100c0458f6578be 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 8.0E-49 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CHH28_RS03095 0f86e255da269f907100c0458f6578be 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 8.0E-49 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CHH28_RS03095 0f86e255da269f907100c0458f6578be 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 8.0E-49 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CHH28_RS03095 0f86e255da269f907100c0458f6578be 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 29-03-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CHH28_RS03095 0f86e255da269f907100c0458f6578be 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.514 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CHH28_RS03095 0f86e255da269f907100c0458f6578be 264 Gene3D G3DSA:3.30.572.10 1 264 5.1E-132 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CHH28_RS03095 0f86e255da269f907100c0458f6578be 264 SUPERFAMILY SSF55831 1 264 1.05E-129 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CHH28_RS03095 0f86e255da269f907100c0458f6578be 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 3.8E-41 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CHH28_RS03095 0f86e255da269f907100c0458f6578be 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 2.1E-95 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CHH28_RS19240 64cc8b28054461412ca7d283242bab61 269 Gene3D G3DSA:3.90.226.10 1 267 6.8E-66 T 29-03-2018 CHH28_RS19240 64cc8b28054461412ca7d283242bab61 269 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 255 4.0E-40 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CHH28_RS19240 64cc8b28054461412ca7d283242bab61 269 SUPERFAMILY SSF52096 1 255 1.22E-70 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS15700 0580be9d0d9be6655fee75eb78021359 349 Pfam PF12833 Helix-turn-helix domain 261 339 4.2E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS15700 0580be9d0d9be6655fee75eb78021359 349 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 321 2.7E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS15700 0580be9d0d9be6655fee75eb78021359 349 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 321 337 2.7E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS15700 0580be9d0d9be6655fee75eb78021359 349 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 26 211 1.2E-41 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS15700 0580be9d0d9be6655fee75eb78021359 349 Gene3D G3DSA:1.10.10.60 290 347 1.1E-15 T 29-03-2018 CHH28_RS15700 0580be9d0d9be6655fee75eb78021359 349 SMART SM00342 255 337 1.5E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS15700 0580be9d0d9be6655fee75eb78021359 349 Gene3D G3DSA:1.10.10.60 203 282 8.6E-4 T 29-03-2018 CHH28_RS15700 0580be9d0d9be6655fee75eb78021359 349 SUPERFAMILY SSF46689 290 340 1.48E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS04115 7464b962dc1b59e8df78d85ff1eec007 80 Gene3D G3DSA:1.10.10.60 3 33 2.1E-6 T 29-03-2018 CHH28_RS04115 7464b962dc1b59e8df78d85ff1eec007 80 Pfam PF13936 Helix-turn-helix domain 2 32 7.9E-8 T 29-03-2018 IPR025246 Transposase IS30-like HTH domain CHH28_RS13900 41be95acdb655262bbc76015d5332167 222 Gene3D G3DSA:1.10.10.10 93 221 4.8E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS09435 5ac2fbb1e431e6813e829f8bf5932681 244 Gene3D G3DSA:3.30.70.270 128 236 4.5E-34 T 29-03-2018 CHH28_RS09435 5ac2fbb1e431e6813e829f8bf5932681 244 SMART SM00267 120 243 2.5E-9 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS09435 5ac2fbb1e431e6813e829f8bf5932681 244 Gene3D G3DSA:3.30.450.40 1 127 4.0E-20 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS09435 5ac2fbb1e431e6813e829f8bf5932681 244 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 127 224 1.7E-31 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS09435 5ac2fbb1e431e6813e829f8bf5932681 244 Pfam PF01590 GAF domain 22 104 2.1E-6 T 29-03-2018 IPR003018 GAF domain GO:0005515 CHH28_RS09435 5ac2fbb1e431e6813e829f8bf5932681 244 SUPERFAMILY SSF55073 135 228 6.36E-28 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS09435 5ac2fbb1e431e6813e829f8bf5932681 244 Pfam PF00990 Diguanylate cyclase, GGDEF domain 130 226 4.4E-30 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS09435 5ac2fbb1e431e6813e829f8bf5932681 244 SUPERFAMILY SSF55781 1 117 6.76E-18 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS19220 1befdc0741ec512184c17eabc8f35158 164 Gene3D G3DSA:3.40.630.30 2 164 1.3E-27 T 29-03-2018 CHH28_RS19220 1befdc0741ec512184c17eabc8f35158 164 SUPERFAMILY SSF55729 6 149 3.04E-24 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS19220 1befdc0741ec512184c17eabc8f35158 164 Pfam PF00583 Acetyltransferase (GNAT) family 20 142 4.3E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS09195 6eda96dedfdc86158c556cdf7c07b4c5 410 ProSitePatterns PS00018 EF-hand calcium-binding domain. 251 263 - T 29-03-2018 IPR018247 EF-Hand 1, calcium-binding site CHH28_RS09195 6eda96dedfdc86158c556cdf7c07b4c5 410 Gene3D G3DSA:2.40.170.20 195 409 1.9E-8 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS09195 6eda96dedfdc86158c556cdf7c07b4c5 410 SUPERFAMILY SSF56935 198 242 6.1E-5 T 29-03-2018 CHH28_RS09195 6eda96dedfdc86158c556cdf7c07b4c5 410 SUPERFAMILY SSF56935 273 403 6.1E-5 T 29-03-2018 CHH28_RS09195 6eda96dedfdc86158c556cdf7c07b4c5 410 Pfam PF12094 Protein of unknown function (DUF3570) 12 399 3.0E-53 T 29-03-2018 IPR021953 Protein of unknown function DUF3570 CHH28_RS12765 982ae5b27283df0b445b32331cdc6b2a 159 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 19 122 2.6E-17 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CHH28_RS12765 982ae5b27283df0b445b32331cdc6b2a 159 Pfam PF03061 Thioesterase superfamily 51 121 2.1E-13 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CHH28_RS12765 982ae5b27283df0b445b32331cdc6b2a 159 Gene3D G3DSA:3.10.129.10 4 143 4.7E-26 T 29-03-2018 CHH28_RS12765 982ae5b27283df0b445b32331cdc6b2a 159 SUPERFAMILY SSF54637 8 139 1.14E-27 T 29-03-2018 IPR029069 HotDog domain CHH28_RS18565 4fd5baa90d259593fdde006ef31a5b46 320 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 146 167 - T 29-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 CHH28_RS18565 4fd5baa90d259593fdde006ef31a5b46 320 Pfam PF00107 Zinc-binding dehydrogenase 157 257 4.1E-13 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CHH28_RS18565 4fd5baa90d259593fdde006ef31a5b46 320 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 108 1.7E-7 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CHH28_RS18565 4fd5baa90d259593fdde006ef31a5b46 320 SUPERFAMILY SSF51735 119 259 1.79E-29 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS18565 4fd5baa90d259593fdde006ef31a5b46 320 Gene3D G3DSA:3.90.180.10 2 141 4.0E-36 T 29-03-2018 CHH28_RS18565 4fd5baa90d259593fdde006ef31a5b46 320 SMART SM00829 13 317 3.3E-14 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CHH28_RS18565 4fd5baa90d259593fdde006ef31a5b46 320 SUPERFAMILY SSF50129 7 153 1.52E-34 T 29-03-2018 IPR011032 GroES-like CHH28_RS18565 4fd5baa90d259593fdde006ef31a5b46 320 Gene3D G3DSA:3.40.50.720 142 287 8.5E-25 T 29-03-2018 CHH28_RS06740 25277d34d45901039dde44d207da09e5 84 SUPERFAMILY SSF55331 2 74 6.94E-18 T 29-03-2018 IPR014347 Tautomerase/MIF superfamily CHH28_RS06740 25277d34d45901039dde44d207da09e5 84 Gene3D G3DSA:3.30.429.10 1 84 8.5E-14 T 29-03-2018 CHH28_RS06740 25277d34d45901039dde44d207da09e5 84 Pfam PF14552 Tautomerase enzyme 6 68 3.5E-18 T 29-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CHH28_RS03425 1e6b9cf30f399f5e46feb49c43de95c8 229 Gene3D G3DSA:1.10.10.10 125 228 7.2E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS03425 1e6b9cf30f399f5e46feb49c43de95c8 229 SUPERFAMILY SSF52172 2 125 1.71E-39 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS03425 1e6b9cf30f399f5e46feb49c43de95c8 229 SMART SM00448 2 112 1.0E-41 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS03425 1e6b9cf30f399f5e46feb49c43de95c8 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 2.6E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS03425 1e6b9cf30f399f5e46feb49c43de95c8 229 SUPERFAMILY SSF46894 127 227 6.24E-25 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CHH28_RS03425 1e6b9cf30f399f5e46feb49c43de95c8 229 Pfam PF00072 Response regulator receiver domain 4 113 1.0E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS03425 1e6b9cf30f399f5e46feb49c43de95c8 229 SMART SM00862 150 226 1.1E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS03425 1e6b9cf30f399f5e46feb49c43de95c8 229 Gene3D G3DSA:3.40.50.2300 2 124 6.8E-33 T 29-03-2018 CHH28_RS17690 dd2f008cb01bf9beff8fccf6a50b5e99 317 SMART SM00267 134 304 2.6E-57 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS17690 dd2f008cb01bf9beff8fccf6a50b5e99 317 Pfam PF00990 Diguanylate cyclase, GGDEF domain 144 300 2.6E-45 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS17690 dd2f008cb01bf9beff8fccf6a50b5e99 317 SUPERFAMILY SSF55073 149 303 1.26E-45 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS17690 dd2f008cb01bf9beff8fccf6a50b5e99 317 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 143 303 1.3E-48 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS17690 dd2f008cb01bf9beff8fccf6a50b5e99 317 Gene3D G3DSA:3.30.70.270 137 310 1.1E-52 T 29-03-2018 CHH28_RS08550 1d5384e966e2348ce022d9476366e79d 487 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 144 158 - T 29-03-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 CHH28_RS08550 1d5384e966e2348ce022d9476366e79d 487 Pfam PF02637 GatB domain 328 483 4.8E-33 T 29-03-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 CHH28_RS08550 1d5384e966e2348ce022d9476366e79d 487 Pfam PF02934 GatB/GatE catalytic domain 5 289 3.1E-110 T 29-03-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 CHH28_RS08550 1d5384e966e2348ce022d9476366e79d 487 SUPERFAMILY SSF55931 4 296 4.38E-118 T 29-03-2018 CHH28_RS08550 1d5384e966e2348ce022d9476366e79d 487 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 483 8.2E-160 T 29-03-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CHH28_RS08550 1d5384e966e2348ce022d9476366e79d 487 SMART SM00845 328 483 3.6E-51 T 29-03-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 CHH28_RS08550 1d5384e966e2348ce022d9476366e79d 487 Gene3D G3DSA:1.10.10.410 420 484 5.7E-11 T 29-03-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CHH28_RS08550 1d5384e966e2348ce022d9476366e79d 487 SUPERFAMILY SSF89095 297 402 3.79E-31 T 29-03-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CHH28_RS08550 1d5384e966e2348ce022d9476366e79d 487 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 484 36.216 T 29-03-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CHH28_RS04910 4c7f3be2a7af73fda83f04237e1e521d 197 Pfam PF04973 Nicotinamide mononucleotide transporter 3 182 2.8E-44 T 29-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CHH28_RS04910 4c7f3be2a7af73fda83f04237e1e521d 197 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 5 184 2.2E-18 T 29-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CHH28_RS12490 e15162cf00fd59bdd96892b1bb9dc64a 885 Pfam PF03993 Domain of Unknown Function (DUF349) 667 729 3.8E-8 T 29-03-2018 IPR007139 Protein of unknown function DUF349 CHH28_RS12490 e15162cf00fd59bdd96892b1bb9dc64a 885 Pfam PF03993 Domain of Unknown Function (DUF349) 598 662 2.9E-12 T 29-03-2018 IPR007139 Protein of unknown function DUF349 CHH28_RS12490 e15162cf00fd59bdd96892b1bb9dc64a 885 Pfam PF03993 Domain of Unknown Function (DUF349) 515 592 2.5E-12 T 29-03-2018 IPR007139 Protein of unknown function DUF349 CHH28_RS17520 fa0e96ddf773980287a0be62ce6c1ad0 349 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 47.312 T 29-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CHH28_RS17520 fa0e96ddf773980287a0be62ce6c1ad0 349 Pfam PF02769 AIR synthase related protein, C-terminal domain 176 337 3.0E-37 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CHH28_RS17520 fa0e96ddf773980287a0be62ce6c1ad0 349 Gene3D G3DSA:3.30.1330.10 36 161 3.5E-52 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CHH28_RS17520 fa0e96ddf773980287a0be62ce6c1ad0 349 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 333 4.3E-144 T 29-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CHH28_RS17520 fa0e96ddf773980287a0be62ce6c1ad0 349 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 163 1.1E-14 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CHH28_RS17520 fa0e96ddf773980287a0be62ce6c1ad0 349 SUPERFAMILY SSF56042 171 338 5.68E-62 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CHH28_RS17520 fa0e96ddf773980287a0be62ce6c1ad0 349 Gene3D G3DSA:3.90.650.10 171 345 3.6E-65 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CHH28_RS17520 fa0e96ddf773980287a0be62ce6c1ad0 349 SUPERFAMILY SSF55326 7 170 4.71E-52 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CHH28_RS13405 216866aeaacc5749e2643b0c951f2bec 327 Gene3D G3DSA:3.40.50.410 85 305 5.6E-46 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS13405 216866aeaacc5749e2643b0c951f2bec 327 SMART SM00327 89 284 4.5E-25 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS13405 216866aeaacc5749e2643b0c951f2bec 327 Pfam PF00092 von Willebrand factor type A domain 91 276 3.1E-28 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS13405 216866aeaacc5749e2643b0c951f2bec 327 SUPERFAMILY SSF53300 86 279 2.37E-37 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS15135 5b557f7fa7e7019cba46371d413afd24 304 Pfam PF03881 Fructosamine kinase 39 302 3.8E-86 T 29-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CHH28_RS15135 5b557f7fa7e7019cba46371d413afd24 304 PIRSF PIRSF006221 23 304 1.5E-79 T 29-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CHH28_RS15135 5b557f7fa7e7019cba46371d413afd24 304 SUPERFAMILY SSF56112 28 301 1.75E-38 T 29-03-2018 IPR011009 Protein kinase-like domain CHH28_RS15135 5b557f7fa7e7019cba46371d413afd24 304 Gene3D G3DSA:3.90.1200.10 119 297 6.6E-17 T 29-03-2018 CHH28_RS15135 5b557f7fa7e7019cba46371d413afd24 304 Gene3D G3DSA:3.30.200.20 20 111 4.4E-8 T 29-03-2018 CHH28_RS16965 2db5e7b5fdb74bdae8a7f2a576e1e8c6 271 SUPERFAMILY SSF81901 69 126 1.31E-7 T 29-03-2018 CHH28_RS16965 2db5e7b5fdb74bdae8a7f2a576e1e8c6 271 SUPERFAMILY SSF81901 210 249 1.31E-7 T 29-03-2018 CHH28_RS16965 2db5e7b5fdb74bdae8a7f2a576e1e8c6 271 Gene3D G3DSA:1.25.40.10 185 268 1.1E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS16965 2db5e7b5fdb74bdae8a7f2a576e1e8c6 271 Pfam PF13174 Tetratricopeptide repeat 219 254 4.7E-4 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS16965 2db5e7b5fdb74bdae8a7f2a576e1e8c6 271 Gene3D G3DSA:1.25.40.10 33 174 0.012 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS02885 76af1795b45ddeb4651f72568ee83159 654 SUPERFAMILY SSF51905 4 181 1.1E-26 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS02885 76af1795b45ddeb4651f72568ee83159 654 SUPERFAMILY SSF51905 287 322 1.1E-26 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS02885 76af1795b45ddeb4651f72568ee83159 654 Gene3D G3DSA:3.50.50.60 1 179 3.8E-17 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS02885 76af1795b45ddeb4651f72568ee83159 654 Pfam PF01494 FAD binding domain 4 181 7.3E-11 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 CHH28_RS02885 76af1795b45ddeb4651f72568ee83159 654 Gene3D G3DSA:3.30.9.10 180 359 5.8E-9 T 29-03-2018 CHH28_RS18820 d845d098b2a0bd66113a3a03e5c31961 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CHH28_RS18820 d845d098b2a0bd66113a3a03e5c31961 440 Gene3D G3DSA:3.40.50.300 92 363 1.4E-84 T 29-03-2018 CHH28_RS18820 d845d098b2a0bd66113a3a03e5c31961 440 SMART SM00382 158 341 1.9E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS18820 d845d098b2a0bd66113a3a03e5c31961 440 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 23 435 2.5E-196 T 29-03-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CHH28_RS18820 d845d098b2a0bd66113a3a03e5c31961 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 20 437 3.5E-180 T 29-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CHH28_RS18820 d845d098b2a0bd66113a3a03e5c31961 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 6.1E-75 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CHH28_RS18820 d845d098b2a0bd66113a3a03e5c31961 440 SUPERFAMILY SSF52540 93 363 2.73E-97 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS18015 a05101ac87f02476f8d36c0833d002d0 194 Pfam PF00571 CBS domain 105 166 2.9E-4 T 29-03-2018 IPR000644 CBS domain CHH28_RS18015 a05101ac87f02476f8d36c0833d002d0 194 Pfam PF00571 CBS domain 37 84 1.3E-4 T 29-03-2018 IPR000644 CBS domain CHH28_RS18015 a05101ac87f02476f8d36c0833d002d0 194 Gene3D G3DSA:3.10.580.10 88 192 3.9E-10 T 29-03-2018 CHH28_RS18015 a05101ac87f02476f8d36c0833d002d0 194 SUPERFAMILY SSF54631 36 164 3.36E-16 T 29-03-2018 CHH28_RS18015 a05101ac87f02476f8d36c0833d002d0 194 Gene3D G3DSA:3.10.580.10 5 87 8.5E-9 T 29-03-2018 CHH28_RS04425 f230624d9b1e6555bc844793ae921b3e 207 Pfam PF01810 LysE type translocator 16 201 2.0E-35 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS04425 f230624d9b1e6555bc844793ae921b3e 207 PIRSF PIRSF006324 1 206 2.9E-53 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS05730 7a36612e5624a73ecf6a11cad2ef9127 400 Gene3D G3DSA:2.40.160.10 11 400 2.8E-36 T 29-03-2018 CHH28_RS05730 7a36612e5624a73ecf6a11cad2ef9127 400 SUPERFAMILY SSF56935 257 379 1.15E-32 T 29-03-2018 CHH28_RS05730 7a36612e5624a73ecf6a11cad2ef9127 400 SUPERFAMILY SSF56935 24 219 1.15E-32 T 29-03-2018 CHH28_RS09320 1299c3c82213f44034bd2741f45ae62b 406 SUPERFAMILY SSF53218 176 321 2.09E-38 T 29-03-2018 IPR001453 MoaB/Mog domain CHH28_RS09320 1299c3c82213f44034bd2741f45ae62b 406 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 252 285 - T 29-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CHH28_RS09320 1299c3c82213f44034bd2741f45ae62b 406 Gene3D G3DSA:3.40.980.10 151 323 2.1E-50 T 29-03-2018 IPR001453 MoaB/Mog domain CHH28_RS09320 1299c3c82213f44034bd2741f45ae62b 406 Pfam PF03454 MoeA C-terminal region (domain IV) 330 400 2.5E-15 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CHH28_RS09320 1299c3c82213f44034bd2741f45ae62b 406 SMART SM00852 179 316 2.6E-37 T 29-03-2018 IPR001453 MoaB/Mog domain CHH28_RS09320 1299c3c82213f44034bd2741f45ae62b 406 Pfam PF00994 Probable molybdopterin binding domain 179 310 3.4E-24 T 29-03-2018 IPR001453 MoaB/Mog domain CHH28_RS09320 1299c3c82213f44034bd2741f45ae62b 406 SUPERFAMILY SSF63867 325 404 3.66E-20 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CHH28_RS09320 1299c3c82213f44034bd2741f45ae62b 406 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 166 8.7E-39 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CHH28_RS09320 1299c3c82213f44034bd2741f45ae62b 406 Gene3D G3DSA:2.170.190.11 53 150 3.2E-21 T 29-03-2018 CHH28_RS09320 1299c3c82213f44034bd2741f45ae62b 406 SUPERFAMILY SSF63882 9 174 1.05E-44 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CHH28_RS09320 1299c3c82213f44034bd2741f45ae62b 406 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 176 309 5.2E-30 T 29-03-2018 IPR001453 MoaB/Mog domain CHH28_RS09320 1299c3c82213f44034bd2741f45ae62b 406 Gene3D G3DSA:2.40.340.10 327 398 1.1E-17 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CHH28_RS16915 05210d850762c4f5e872eacc15a37b01 152 Pfam PF07238 PilZ domain 60 136 2.8E-9 T 29-03-2018 IPR009875 PilZ domain GO:0035438 CHH28_RS16915 05210d850762c4f5e872eacc15a37b01 152 Gene3D G3DSA:2.40.10.220 32 151 4.3E-11 T 29-03-2018 CHH28_RS17280 05717de610ba10176014b5458b950de6 131 SUPERFAMILY SSF55083 1 112 6.28E-20 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CHH28_RS17280 05717de610ba10176014b5458b950de6 131 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 100 8.7E-16 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CHH28_RS17280 05717de610ba10176014b5458b950de6 131 Gene3D G3DSA:3.30.70.560 1 116 3.2E-21 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CHH28_RS17280 05717de610ba10176014b5458b950de6 131 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 111 5.5E-16 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CHH28_RS01160 bd436e2f4396190270119a60c56f6bf8 433 Gene3D G3DSA:1.10.3430.10 25 402 1.1E-118 T 29-03-2018 CHH28_RS01160 bd436e2f4396190270119a60c56f6bf8 433 TIGRFAM TIGR00836 amt: ammonium transporter 33 421 9.7E-121 T 29-03-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CHH28_RS01160 bd436e2f4396190270119a60c56f6bf8 433 PRINTS PR00342 Rhesus blood group protein signature 120 136 1.8E-5 T 29-03-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 CHH28_RS01160 bd436e2f4396190270119a60c56f6bf8 433 PRINTS PR00342 Rhesus blood group protein signature 257 279 1.8E-5 T 29-03-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 CHH28_RS01160 bd436e2f4396190270119a60c56f6bf8 433 PRINTS PR00342 Rhesus blood group protein signature 312 330 1.8E-5 T 29-03-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 CHH28_RS01160 bd436e2f4396190270119a60c56f6bf8 433 SUPERFAMILY SSF111352 31 401 6.15E-107 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CHH28_RS01160 bd436e2f4396190270119a60c56f6bf8 433 ProSitePatterns PS01219 Ammonium transporters signature. 181 206 - T 29-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CHH28_RS01160 bd436e2f4396190270119a60c56f6bf8 433 Pfam PF00909 Ammonium Transporter Family 35 421 5.8E-117 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CHH28_RS05445 4c8385ab57dabe640091ea9fe3881700 223 Pfam PF04340 Protein of unknown function, DUF484 5 218 1.9E-49 T 29-03-2018 IPR007435 Protein of unknown function DUF484 CHH28_RS05445 4c8385ab57dabe640091ea9fe3881700 223 Gene3D G3DSA:3.30.450.40 41 219 1.2E-4 T 29-03-2018 IPR029016 GAF domain-like CHH28_RS04390 6f2fe5a9999de9a5f10f68d4d1d7b397 134 Gene3D G3DSA:3.30.230.10 1 120 4.3E-29 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CHH28_RS04390 6f2fe5a9999de9a5f10f68d4d1d7b397 134 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 11 115 4.4E-23 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CHH28_RS04390 6f2fe5a9999de9a5f10f68d4d1d7b397 134 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 116 17.51 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CHH28_RS04390 6f2fe5a9999de9a5f10f68d4d1d7b397 134 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 18 102 5.0E-12 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CHH28_RS04390 6f2fe5a9999de9a5f10f68d4d1d7b397 134 Pfam PF00825 Ribonuclease P 6 113 4.3E-27 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CHH28_RS04390 6f2fe5a9999de9a5f10f68d4d1d7b397 134 SUPERFAMILY SSF54211 6 116 2.02E-27 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS04390 6f2fe5a9999de9a5f10f68d4d1d7b397 134 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 57 71 - T 29-03-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 CHH28_RS08920 a008dbc4ed61340cf51fb5488c024996 337 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 311 2.7E-56 T 29-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CHH28_RS15450 0f3642e51313acb244188d0b790c2527 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 135 7.7E-31 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CHH28_RS14300 58f24c209f326c43daf48457608fe584 230 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 40 218 5.2E-52 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CHH28_RS14300 58f24c209f326c43daf48457608fe584 230 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 230 78.747 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CHH28_RS14300 58f24c209f326c43daf48457608fe584 230 SUPERFAMILY SSF55729 8 223 9.32E-76 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS14300 58f24c209f326c43daf48457608fe584 230 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 38 204 1.5E-60 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CHH28_RS18900 fdb4c0360406d1e80f028152ddf98020 94 SUPERFAMILY SSF160214 9 84 2.35E-22 T 29-03-2018 IPR005186 FlaG protein CHH28_RS18900 fdb4c0360406d1e80f028152ddf98020 94 Gene3D G3DSA:3.30.160.170 2 86 8.0E-22 T 29-03-2018 IPR005186 FlaG protein CHH28_RS18900 fdb4c0360406d1e80f028152ddf98020 94 Pfam PF03646 FlaG protein 12 90 2.9E-21 T 29-03-2018 IPR005186 FlaG protein CHH28_RS17470 cf7100f8290acf8985d1cc6d9a0daf29 125 SUPERFAMILY SSF46955 1 109 5.13E-22 T 29-03-2018 IPR009061 Putative DNA-binding domain CHH28_RS17470 cf7100f8290acf8985d1cc6d9a0daf29 125 Gene3D G3DSA:1.10.1660.10 54 123 2.1E-6 T 29-03-2018 CHH28_RS17470 cf7100f8290acf8985d1cc6d9a0daf29 125 Pfam PF13411 MerR HTH family regulatory protein 3 64 6.0E-13 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS17470 cf7100f8290acf8985d1cc6d9a0daf29 125 Gene3D G3DSA:1.10.1660.10 1 53 9.2E-15 T 29-03-2018 CHH28_RS17470 cf7100f8290acf8985d1cc6d9a0daf29 125 SMART SM00422 1 68 1.5E-14 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS15010 af57113156813ec4682fcca9331c5437 205 Pfam PF00702 haloacid dehalogenase-like hydrolase 57 164 2.8E-10 T 29-03-2018 CHH28_RS15010 af57113156813ec4682fcca9331c5437 205 Gene3D G3DSA:3.40.50.1000 74 205 1.7E-16 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS15010 af57113156813ec4682fcca9331c5437 205 TIGRFAM TIGR02137 HSK-PSP: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 1 203 6.9E-110 T 29-03-2018 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 CHH28_RS15010 af57113156813ec4682fcca9331c5437 205 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 17 162 1.5E-13 T 29-03-2018 CHH28_RS15010 af57113156813ec4682fcca9331c5437 205 SUPERFAMILY SSF56784 2 190 5.79E-46 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS15010 af57113156813ec4682fcca9331c5437 205 Gene3D G3DSA:3.90.1470.10 13 73 6.2E-33 T 29-03-2018 CHH28_RS02355 920c7e01fc83dddfa1d7293b6512cd53 545 ProSitePatterns PS00455 Putative AMP-binding domain signature. 181 192 - T 29-03-2018 IPR020845 AMP-binding, conserved site CHH28_RS02355 920c7e01fc83dddfa1d7293b6512cd53 545 SUPERFAMILY SSF56801 6 541 9.42E-136 T 29-03-2018 CHH28_RS02355 920c7e01fc83dddfa1d7293b6512cd53 545 Gene3D G3DSA:3.40.50.980 8 186 3.1E-36 T 29-03-2018 CHH28_RS02355 920c7e01fc83dddfa1d7293b6512cd53 545 Pfam PF00501 AMP-binding enzyme 19 443 3.3E-88 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CHH28_RS02355 920c7e01fc83dddfa1d7293b6512cd53 545 Gene3D G3DSA:3.40.50.980 187 343 2.0E-36 T 29-03-2018 CHH28_RS02355 920c7e01fc83dddfa1d7293b6512cd53 545 Gene3D G3DSA:2.30.38.10 344 436 4.3E-16 T 29-03-2018 CHH28_RS02355 920c7e01fc83dddfa1d7293b6512cd53 545 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 527 1.2E-15 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CHH28_RS02355 920c7e01fc83dddfa1d7293b6512cd53 545 Gene3D G3DSA:3.30.300.30 437 542 2.5E-24 T 29-03-2018 CHH28_RS19335 f006c683216671d61c20b618284a173e 266 SUPERFAMILY SSF51206 133 257 1.7E-26 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CHH28_RS19335 f006c683216671d61c20b618284a173e 266 PRINTS PR00103 cAMP-dependent protein kinase signature 169 183 1.1E-7 T 29-03-2018 CHH28_RS19335 f006c683216671d61c20b618284a173e 266 PRINTS PR00103 cAMP-dependent protein kinase signature 194 203 1.1E-7 T 29-03-2018 CHH28_RS19335 f006c683216671d61c20b618284a173e 266 PRINTS PR00103 cAMP-dependent protein kinase signature 206 217 1.1E-7 T 29-03-2018 CHH28_RS19335 f006c683216671d61c20b618284a173e 266 PRINTS PR00103 cAMP-dependent protein kinase signature 154 168 1.1E-7 T 29-03-2018 CHH28_RS19335 f006c683216671d61c20b618284a173e 266 Gene3D G3DSA:2.60.120.10 31 130 4.2E-6 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS19335 f006c683216671d61c20b618284a173e 266 Gene3D G3DSA:2.60.120.10 131 262 4.0E-28 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS19335 f006c683216671d61c20b618284a173e 266 SMART SM00100 125 249 4.7E-16 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS19335 f006c683216671d61c20b618284a173e 266 SUPERFAMILY SSF51206 51 125 1.96E-5 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CHH28_RS19335 f006c683216671d61c20b618284a173e 266 Pfam PF00027 Cyclic nucleotide-binding domain 152 232 4.1E-19 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS05830 2a8b135773dff93865e6b4d66b727cfe 357 SUPERFAMILY SSF53067 63 108 5.18E-18 T 29-03-2018 CHH28_RS05830 2a8b135773dff93865e6b4d66b727cfe 357 SUPERFAMILY SSF53067 3 34 5.18E-18 T 29-03-2018 CHH28_RS05830 2a8b135773dff93865e6b4d66b727cfe 357 SUPERFAMILY SSF53067 139 331 5.18E-18 T 29-03-2018 CHH28_RS05830 2a8b135773dff93865e6b4d66b727cfe 357 Gene3D G3DSA:3.30.420.40 239 357 1.3E-19 T 29-03-2018 CHH28_RS05830 2a8b135773dff93865e6b4d66b727cfe 357 Gene3D G3DSA:3.30.420.40 1 173 5.8E-48 T 29-03-2018 CHH28_RS05830 2a8b135773dff93865e6b4d66b727cfe 357 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 3 357 9.3E-122 T 29-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 CHH28_RS05830 2a8b135773dff93865e6b4d66b727cfe 357 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 2 357 37.393 T 29-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 CHH28_RS14095 8ba3a1af6cd4ad39d447b448fe864959 416 PIRSF PIRSF006603 1 416 9.7E-70 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CHH28_RS14095 8ba3a1af6cd4ad39d447b448fe864959 416 TIGRFAM TIGR00797 matE: MATE efflux family protein 2 388 2.6E-72 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CHH28_RS14095 8ba3a1af6cd4ad39d447b448fe864959 416 Pfam PF01554 MatE 218 375 1.5E-21 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CHH28_RS14095 8ba3a1af6cd4ad39d447b448fe864959 416 Pfam PF01554 MatE 1 156 6.4E-27 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CHH28_RS14385 bcbdacbcbf317d6c0fef88a284c04a4b 184 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 47 69 - T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CHH28_RS14385 bcbdacbcbf317d6c0fef88a284c04a4b 184 PIRSF PIRSF000847 1 184 1.7E-46 T 29-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CHH28_RS14385 bcbdacbcbf317d6c0fef88a284c04a4b 184 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 69 2.6E-19 T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CHH28_RS14385 bcbdacbcbf317d6c0fef88a284c04a4b 184 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 178 1.2E-53 T 29-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CHH28_RS14085 e6466bf7b73e0f87fadc0bbffd47c50c 553 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 329 398 1.1E-14 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CHH28_RS14085 e6466bf7b73e0f87fadc0bbffd47c50c 553 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 110 6.3E-15 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CHH28_RS14085 e6466bf7b73e0f87fadc0bbffd47c50c 553 SUPERFAMILY SSF55124 253 277 4.74E-25 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CHH28_RS14085 e6466bf7b73e0f87fadc0bbffd47c50c 553 SUPERFAMILY SSF55124 316 422 4.74E-25 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CHH28_RS14085 e6466bf7b73e0f87fadc0bbffd47c50c 553 Gene3D G3DSA:3.90.480.10 239 406 4.7E-22 T 29-03-2018 CHH28_RS14085 e6466bf7b73e0f87fadc0bbffd47c50c 553 SUPERFAMILY SSF55124 1 125 5.07E-28 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CHH28_RS14085 e6466bf7b73e0f87fadc0bbffd47c50c 553 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 416 548 1.2E-7 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CHH28_RS14085 e6466bf7b73e0f87fadc0bbffd47c50c 553 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 274 5.5E-42 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CHH28_RS14085 e6466bf7b73e0f87fadc0bbffd47c50c 553 SUPERFAMILY SSF56014 410 550 1.7E-36 T 29-03-2018 CHH28_RS14085 e6466bf7b73e0f87fadc0bbffd47c50c 553 Gene3D G3DSA:3.30.413.10 120 238 8.0E-26 T 29-03-2018 CHH28_RS14085 e6466bf7b73e0f87fadc0bbffd47c50c 553 Gene3D G3DSA:3.30.413.10 407 553 1.4E-28 T 29-03-2018 CHH28_RS14085 e6466bf7b73e0f87fadc0bbffd47c50c 553 SUPERFAMILY SSF56014 120 280 1.7E-45 T 29-03-2018 CHH28_RS13870 91aead9171fcc6e21fc62f71d901ab1a 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 8.3E-34 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CHH28_RS13870 91aead9171fcc6e21fc62f71d901ab1a 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 97 23.791 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CHH28_RS13870 91aead9171fcc6e21fc62f71d901ab1a 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 98 5.9E-35 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CHH28_RS13870 91aead9171fcc6e21fc62f71d901ab1a 108 SUPERFAMILY SSF82607 10 102 7.19E-35 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CHH28_RS13870 91aead9171fcc6e21fc62f71d901ab1a 108 PIRSF PIRSF004555 3 108 2.2E-37 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CHH28_RS13870 91aead9171fcc6e21fc62f71d901ab1a 108 Gene3D G3DSA:3.30.1310.10 1 108 7.8E-43 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CHH28_RS17920 089575b6cefdf54ae3ef3846bb56d0fa 229 Gene3D G3DSA:3.40.190.10 22 228 1.1E-11 T 29-03-2018 CHH28_RS17920 089575b6cefdf54ae3ef3846bb56d0fa 229 SUPERFAMILY SSF53850 30 227 1.85E-14 T 29-03-2018 CHH28_RS08965 00b31778cff59bc37bd7be2189ca294a 215 PIRSF PIRSF006324 1 213 1.8E-46 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS08965 00b31778cff59bc37bd7be2189ca294a 215 Pfam PF01810 LysE type translocator 16 210 9.5E-34 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS04920 ea52424d12287e5562a7adae7c614aa3 318 Gene3D G3DSA:3.30.200.20 1 103 2.0E-22 T 29-03-2018 CHH28_RS04920 ea52424d12287e5562a7adae7c614aa3 318 SUPERFAMILY SSF56112 5 314 1.24E-61 T 29-03-2018 IPR011009 Protein kinase-like domain CHH28_RS04920 ea52424d12287e5562a7adae7c614aa3 318 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 310 2.2E-84 T 29-03-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CHH28_RS04920 ea52424d12287e5562a7adae7c614aa3 318 Hamap MF_00301 Homoserine kinase [thrB]. 1 318 113.705 T 29-03-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CHH28_RS04920 ea52424d12287e5562a7adae7c614aa3 318 Gene3D G3DSA:3.90.1200.10 105 318 2.5E-21 T 29-03-2018 CHH28_RS04920 ea52424d12287e5562a7adae7c614aa3 318 Pfam PF01636 Phosphotransferase enzyme family 29 259 7.1E-28 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CHH28_RS13240 b57dcfa4bb76939a9c1bc6c065593075 686 SMART SM00448 564 677 1.4E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS13240 b57dcfa4bb76939a9c1bc6c065593075 686 SUPERFAMILY SSF52172 564 682 1.01E-36 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS13240 b57dcfa4bb76939a9c1bc6c065593075 686 SUPERFAMILY SSF158472 177 231 9.55E-5 T 29-03-2018 CHH28_RS13240 b57dcfa4bb76939a9c1bc6c065593075 686 Gene3D G3DSA:3.40.50.2300 562 685 3.1E-38 T 29-03-2018 CHH28_RS13240 b57dcfa4bb76939a9c1bc6c065593075 686 SMART SM00304 177 233 3.9E-4 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS13240 b57dcfa4bb76939a9c1bc6c065593075 686 Pfam PF00072 Response regulator receiver domain 567 676 3.2E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS17455 ec0950c8464959a396e90f097d31754e 372 Pfam PF00589 Phage integrase family 180 357 6.4E-13 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CHH28_RS17455 ec0950c8464959a396e90f097d31754e 372 Gene3D G3DSA:1.10.443.10 180 367 1.0E-19 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CHH28_RS17455 ec0950c8464959a396e90f097d31754e 372 Pfam PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain 2 60 3.2E-14 T 29-03-2018 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 CHH28_RS17455 ec0950c8464959a396e90f097d31754e 372 Gene3D G3DSA:3.30.160.60 2 60 6.4E-18 T 29-03-2018 CHH28_RS17455 ec0950c8464959a396e90f097d31754e 372 SUPERFAMILY SSF54171 12 60 3.2E-7 T 29-03-2018 IPR016177 DNA-binding domain GO:0003677 CHH28_RS17455 ec0950c8464959a396e90f097d31754e 372 Gene3D G3DSA:1.10.150.130 69 179 1.5E-9 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CHH28_RS17455 ec0950c8464959a396e90f097d31754e 372 SUPERFAMILY SSF56349 75 357 1.21E-37 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CHH28_RS18370 e6741629866cf1a9bd3fcf12ed6189e3 230 Pfam PF01389 OmpA-like transmembrane domain 45 230 4.9E-5 T 29-03-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 CHH28_RS18370 e6741629866cf1a9bd3fcf12ed6189e3 230 SUPERFAMILY SSF56925 113 230 4.71E-9 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS18370 e6741629866cf1a9bd3fcf12ed6189e3 230 SUPERFAMILY SSF56925 22 74 4.71E-9 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS18370 e6741629866cf1a9bd3fcf12ed6189e3 230 Gene3D G3DSA:2.40.160.20 15 230 3.0E-8 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS12575 9abdb36c438127e16fe26460f83e47b1 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 73 202 4.3E-42 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CHH28_RS12575 9abdb36c438127e16fe26460f83e47b1 227 TIGRFAM TIGR02796 tolQ: protein TolQ 2 215 2.8E-88 T 29-03-2018 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 CHH28_RS05190 b71f0a11bedaa6ccd9c865c4ee82e07c 283 ProSitePatterns PS00356 LacI-type HTH domain signature. 40 58 - T 29-03-2018 CHH28_RS05190 b71f0a11bedaa6ccd9c865c4ee82e07c 283 SUPERFAMILY SSF53697 89 279 1.91E-37 T 29-03-2018 CHH28_RS05190 b71f0a11bedaa6ccd9c865c4ee82e07c 283 Gene3D G3DSA:1.10.10.10 3 96 5.7E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS05190 b71f0a11bedaa6ccd9c865c4ee82e07c 283 Pfam PF01380 SIS domain 128 256 2.0E-18 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CHH28_RS05190 b71f0a11bedaa6ccd9c865c4ee82e07c 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 78 6.4E-23 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CHH28_RS05190 b71f0a11bedaa6ccd9c865c4ee82e07c 283 Gene3D G3DSA:3.40.50.10490 97 282 2.9E-35 T 29-03-2018 CHH28_RS05190 b71f0a11bedaa6ccd9c865c4ee82e07c 283 SUPERFAMILY SSF46689 6 77 2.33E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS04595 02df6f5eebaf16764cf6a3a1e64b4350 616 Gene3D G3DSA:2.130.10.10 14 313 1.9E-16 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS04595 02df6f5eebaf16764cf6a3a1e64b4350 616 SUPERFAMILY SSF51004 247 319 1.52E-15 T 29-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain CHH28_RS04595 02df6f5eebaf16764cf6a3a1e64b4350 616 SUPERFAMILY SSF51004 82 214 1.52E-15 T 29-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain CHH28_RS05510 265304209a5bb4f0c4bdb0eabaafff49 174 SMART SM00260 28 164 7.3E-30 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS05510 265304209a5bb4f0c4bdb0eabaafff49 174 Gene3D G3DSA:2.40.50.180 49 112 6.4E-21 T 29-03-2018 CHH28_RS05510 265304209a5bb4f0c4bdb0eabaafff49 174 SUPERFAMILY SSF50341 29 171 2.88E-36 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS05510 265304209a5bb4f0c4bdb0eabaafff49 174 Pfam PF01584 CheW-like domain 33 167 1.2E-34 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS05510 265304209a5bb4f0c4bdb0eabaafff49 174 Gene3D G3DSA:2.30.30.40 113 158 4.3E-9 T 29-03-2018 CHH28_RS16635 e3b1e2f489d78b5aa116d02103ee0c41 237 Gene3D G3DSA:2.40.10.10 33 194 2.3E-5 T 29-03-2018 CHH28_RS16635 e3b1e2f489d78b5aa116d02103ee0c41 237 SUPERFAMILY SSF50494 32 67 7.83E-5 T 29-03-2018 IPR009003 Peptidase S1, PA clan CHH28_RS01755 5c0b1334c0362307e9cf24aab75ba026 337 Gene3D G3DSA:1.10.1670.10 110 215 9.0E-37 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CHH28_RS01755 5c0b1334c0362307e9cf24aab75ba026 337 SMART SM00525 182 202 0.0033 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CHH28_RS01755 5c0b1334c0362307e9cf24aab75ba026 337 Gene3D G3DSA:3.90.79.10 216 337 5.1E-11 T 29-03-2018 CHH28_RS01755 5c0b1334c0362307e9cf24aab75ba026 337 Pfam PF14815 NUDIX domain 226 335 2.3E-23 T 29-03-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CHH28_RS01755 5c0b1334c0362307e9cf24aab75ba026 337 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 183 199 2.2E-4 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CHH28_RS01755 5c0b1334c0362307e9cf24aab75ba026 337 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 183 199 - T 29-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CHH28_RS01755 5c0b1334c0362307e9cf24aab75ba026 337 SUPERFAMILY SSF55811 211 336 2.25E-25 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CHH28_RS01755 5c0b1334c0362307e9cf24aab75ba026 337 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 26 159 3.1E-19 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CHH28_RS01755 5c0b1334c0362307e9cf24aab75ba026 337 SUPERFAMILY SSF48150 2 216 2.2E-76 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CHH28_RS01755 5c0b1334c0362307e9cf24aab75ba026 337 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 1 261 6.1E-114 T 29-03-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 CHH28_RS01755 5c0b1334c0362307e9cf24aab75ba026 337 ProSitePatterns PS01155 Endonuclease III family signature. 93 122 - T 29-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CHH28_RS01755 5c0b1334c0362307e9cf24aab75ba026 337 Pfam PF00633 Helix-hairpin-helix motif 91 119 2.3E-7 T 29-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CHH28_RS01755 5c0b1334c0362307e9cf24aab75ba026 337 Gene3D G3DSA:1.10.340.30 12 109 8.4E-32 T 29-03-2018 CHH28_RS01755 5c0b1334c0362307e9cf24aab75ba026 337 SMART SM00478 30 181 8.8E-50 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CHH28_RS05110 1e48df1e94cbe9b31dd898a1480163e7 92 Gene3D G3DSA:1.10.150.20 4 81 4.3E-21 T 29-03-2018 CHH28_RS05110 1e48df1e94cbe9b31dd898a1480163e7 92 Pfam PF04994 TfoX C-terminal domain 5 80 4.0E-21 T 29-03-2018 IPR007077 TfoX, C-terminal CHH28_RS13185 023e8f2da6debcfafbaf08bba0024880 296 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 11 293 17.823 T 29-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CHH28_RS13185 023e8f2da6debcfafbaf08bba0024880 296 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 14 291 2.0E-85 T 29-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CHH28_RS13185 023e8f2da6debcfafbaf08bba0024880 296 Pfam PF01040 UbiA prenyltransferase family 28 277 1.3E-56 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CHH28_RS10470 fb83c3611155cddd8375ce3f991436cf 433 SUPERFAMILY SSF58104 235 430 6.93E-46 T 29-03-2018 CHH28_RS10470 fb83c3611155cddd8375ce3f991436cf 433 SUPERFAMILY SSF55785 43 149 2.62E-10 T 29-03-2018 IPR000014 PAS domain CHH28_RS10470 fb83c3611155cddd8375ce3f991436cf 433 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 291 431 2.0E-33 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS10470 fb83c3611155cddd8375ce3f991436cf 433 SMART SM00283 243 432 9.5E-12 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS10470 fb83c3611155cddd8375ce3f991436cf 433 SMART SM00086 100 141 270.0 T 29-03-2018 IPR001610 PAC motif CHH28_RS10470 fb83c3611155cddd8375ce3f991436cf 433 SMART SM00086 219 261 6.5E-5 T 29-03-2018 IPR001610 PAC motif CHH28_RS10470 fb83c3611155cddd8375ce3f991436cf 433 SUPERFAMILY SSF55785 160 261 4.71E-22 T 29-03-2018 IPR000014 PAS domain CHH28_RS10470 fb83c3611155cddd8375ce3f991436cf 433 Gene3D G3DSA:3.30.450.20 8 149 7.3E-14 T 29-03-2018 CHH28_RS10470 fb83c3611155cddd8375ce3f991436cf 433 Pfam PF08448 PAS fold 39 142 4.4E-6 T 29-03-2018 IPR013656 PAS fold-4 CHH28_RS10470 fb83c3611155cddd8375ce3f991436cf 433 Gene3D G3DSA:1.10.287.950 264 433 5.3E-39 T 29-03-2018 CHH28_RS10470 fb83c3611155cddd8375ce3f991436cf 433 Pfam PF13426 PAS domain 164 260 1.8E-12 T 29-03-2018 IPR000014 PAS domain CHH28_RS10470 fb83c3611155cddd8375ce3f991436cf 433 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 37 148 2.8E-7 T 29-03-2018 IPR000014 PAS domain CHH28_RS10470 fb83c3611155cddd8375ce3f991436cf 433 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 147 267 2.7E-17 T 29-03-2018 IPR000014 PAS domain CHH28_RS10470 fb83c3611155cddd8375ce3f991436cf 433 Gene3D G3DSA:3.40.50.10600 150 263 4.0E-25 T 29-03-2018 CHH28_RS08610 843d52aec55cdedbfe450080cb04eef2 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.1E-12 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CHH28_RS08610 843d52aec55cdedbfe450080cb04eef2 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.1E-12 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CHH28_RS08610 843d52aec55cdedbfe450080cb04eef2 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.1E-12 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CHH28_RS08610 843d52aec55cdedbfe450080cb04eef2 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 1.2E-28 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CHH28_RS08610 843d52aec55cdedbfe450080cb04eef2 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 29-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CHH28_RS08610 843d52aec55cdedbfe450080cb04eef2 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.4E-26 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CHH28_RS08610 843d52aec55cdedbfe450080cb04eef2 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CHH28_RS08610 843d52aec55cdedbfe450080cb04eef2 89 SUPERFAMILY SSF55594 1 87 1.02E-27 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CHH28_RS08610 843d52aec55cdedbfe450080cb04eef2 89 Gene3D G3DSA:3.30.1340.10 1 87 3.2E-29 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CHH28_RS01890 62bba55bf033acfa369421df4438d74c 323 Gene3D G3DSA:3.90.550.10 2 196 1.4E-37 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS01890 62bba55bf033acfa369421df4438d74c 323 SUPERFAMILY SSF53448 7 257 4.69E-44 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS01890 62bba55bf033acfa369421df4438d74c 323 Pfam PF00535 Glycosyl transferase family 2 13 175 5.4E-30 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CHH28_RS06970 c2482e36c4aad961a5862ac4aa8433fe 141 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 98 6.0E-19 T 29-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CHH28_RS06970 c2482e36c4aad961a5862ac4aa8433fe 141 Gene3D G3DSA:3.40.140.10 1 134 1.1E-31 T 29-03-2018 CHH28_RS06970 c2482e36c4aad961a5862ac4aa8433fe 141 SUPERFAMILY SSF53927 1 136 3.54E-40 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CHH28_RS06970 c2482e36c4aad961a5862ac4aa8433fe 141 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 49 87 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CHH28_RS19085 84ad50315b8828341b1db0a2944875e0 141 Gene3D G3DSA:2.20.25.10 1 44 2.1E-15 T 29-03-2018 CHH28_RS19085 84ad50315b8828341b1db0a2944875e0 141 Pfam PF02566 OsmC-like protein 40 138 6.9E-18 T 29-03-2018 IPR003718 OsmC/Ohr family CHH28_RS19085 84ad50315b8828341b1db0a2944875e0 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 139 9.3E-54 T 29-03-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 CHH28_RS19085 84ad50315b8828341b1db0a2944875e0 141 SUPERFAMILY SSF82784 1 140 2.36E-41 T 29-03-2018 IPR003718 OsmC/Ohr family CHH28_RS19085 84ad50315b8828341b1db0a2944875e0 141 Gene3D G3DSA:3.30.300.20 45 141 4.8E-24 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CHH28_RS03505 d21ea88518a9b6a28086b911f69f3aa3 186 Pfam PF02600 Disulfide bond formation protein DsbB 30 177 2.5E-36 T 29-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CHH28_RS03505 d21ea88518a9b6a28086b911f69f3aa3 186 SUPERFAMILY SSF158442 31 179 3.01E-35 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain CHH28_RS03505 d21ea88518a9b6a28086b911f69f3aa3 186 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 22 185 19.277 T 29-03-2018 IPR022920 Disulphide bond formation protein DsbB CHH28_RS03505 d21ea88518a9b6a28086b911f69f3aa3 186 Gene3D G3DSA:1.20.1550.10 20 186 3.9E-43 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain CHH28_RS00170 dfbcb1eb5550e5711ce959ecbf68a6c0 185 Pfam PF03550 Outer membrane lipoprotein LolB 30 181 8.2E-38 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CHH28_RS00170 dfbcb1eb5550e5711ce959ecbf68a6c0 185 SUPERFAMILY SSF89392 15 183 8.63E-35 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CHH28_RS00170 dfbcb1eb5550e5711ce959ecbf68a6c0 185 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 30 182 6.9E-32 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CHH28_RS00170 dfbcb1eb5550e5711ce959ecbf68a6c0 185 Gene3D G3DSA:2.50.20.10 21 184 3.6E-36 T 29-03-2018 CHH28_RS01730 ee81d11d5801ea1d33606d3a2b48304c 196 SUPERFAMILY SSF54211 3 87 1.19E-34 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS01730 ee81d11d5801ea1d33606d3a2b48304c 196 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 157 169 - T 29-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CHH28_RS01730 ee81d11d5801ea1d33606d3a2b48304c 196 SUPERFAMILY SSF54211 89 179 2.15E-34 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS01730 ee81d11d5801ea1d33606d3a2b48304c 196 Gene3D G3DSA:3.30.230.40 1 89 2.3E-35 T 29-03-2018 CHH28_RS01730 ee81d11d5801ea1d33606d3a2b48304c 196 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 29-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CHH28_RS01730 ee81d11d5801ea1d33606d3a2b48304c 196 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 175 6.1E-63 T 29-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CHH28_RS01730 ee81d11d5801ea1d33606d3a2b48304c 196 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 196 42.296 T 29-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CHH28_RS01730 ee81d11d5801ea1d33606d3a2b48304c 196 Gene3D G3DSA:3.30.230.40 91 196 5.8E-32 T 29-03-2018 CHH28_RS01630 70da09d1f48d804d339f09a85fedec5e 120 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 103 2.1E-25 T 29-03-2018 CHH28_RS15040 dbc60e2b94dadf0cbf36deb5d66b095d 383 Gene3D G3DSA:3.90.350.10 173 310 4.4E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS15040 dbc60e2b94dadf0cbf36deb5d66b095d 383 Pfam PF14294 Domain of unknown function (DUF4372) 3 76 5.5E-27 T 29-03-2018 IPR025399 Domain of unknown function DUF4372 CHH28_RS15040 dbc60e2b94dadf0cbf36deb5d66b095d 383 SUPERFAMILY SSF53098 87 347 2.88E-29 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS15040 dbc60e2b94dadf0cbf36deb5d66b095d 383 Pfam PF01609 Transposase DDE domain 141 330 1.2E-23 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CHH28_RS14185 d069a5afa8fb5139b2784a14b8b21ff5 197 Gene3D G3DSA:3.30.70.240 132 187 7.0E-8 T 29-03-2018 CHH28_RS14185 d069a5afa8fb5139b2784a14b8b21ff5 197 Pfam PF09186 Domain of unknown function (DUF1949) 139 184 9.5E-6 T 29-03-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CHH28_RS14185 d069a5afa8fb5139b2784a14b8b21ff5 197 Pfam PF01205 Uncharacterized protein family UPF0029 16 121 2.5E-27 T 29-03-2018 IPR001498 Impact, N-terminal CHH28_RS14185 d069a5afa8fb5139b2784a14b8b21ff5 197 Gene3D G3DSA:3.30.230.30 1 130 1.4E-37 T 29-03-2018 IPR001498 Impact, N-terminal CHH28_RS14185 d069a5afa8fb5139b2784a14b8b21ff5 197 SUPERFAMILY SSF54980 136 184 1.87E-5 T 29-03-2018 IPR035647 EF-G domain III/V-like CHH28_RS14185 d069a5afa8fb5139b2784a14b8b21ff5 197 SUPERFAMILY SSF54211 4 126 1.33E-38 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS10540 4b22b697880afc309afaaacefcfe1eb9 199 Pfam PF10986 Protein of unknown function (DUF2796) 36 191 1.5E-41 T 29-03-2018 IPR021253 Protein of unknown function DUF2796 CHH28_RS06795 dd2e773325770a6888fb8baec8fbb630 266 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 45 205 5.3E-38 T 29-03-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 CHH28_RS06795 dd2e773325770a6888fb8baec8fbb630 266 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 79 101 - T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CHH28_RS06795 dd2e773325770a6888fb8baec8fbb630 266 Pfam PF01066 CDP-alcohol phosphatidyltransferase 38 101 1.1E-13 T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CHH28_RS05350 497eaaea3c778b99554d0098d573204c 231 Pfam PF01168 Alanine racemase, N-terminal domain 10 227 4.2E-28 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CHH28_RS05350 497eaaea3c778b99554d0098d573204c 231 SUPERFAMILY SSF51419 2 225 8.24E-81 T 29-03-2018 IPR029066 PLP-binding barrel CHH28_RS05350 497eaaea3c778b99554d0098d573204c 231 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 227 3.4E-82 T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CHH28_RS05350 497eaaea3c778b99554d0098d573204c 231 Gene3D G3DSA:3.20.20.10 1 231 1.5E-70 T 29-03-2018 IPR029066 PLP-binding barrel CHH28_RS05350 497eaaea3c778b99554d0098d573204c 231 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CHH28_RS05350 497eaaea3c778b99554d0098d573204c 231 PIRSF PIRSF004848 1 231 7.3E-77 T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CHH28_RS08290 1715d2a6e1ee0f0c0957745cefec528a 589 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 464 584 7.0E-32 T 29-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CHH28_RS08290 1715d2a6e1ee0f0c0957745cefec528a 589 SUPERFAMILY SSF56645 39 276 5.37E-60 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CHH28_RS08290 1715d2a6e1ee0f0c0957745cefec528a 589 SUPERFAMILY SSF47203 283 470 3.06E-45 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS08290 1715d2a6e1ee0f0c0957745cefec528a 589 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 45 159 1.1E-16 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS08290 1715d2a6e1ee0f0c0957745cefec528a 589 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 268 1.1E-16 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CHH28_RS08290 1715d2a6e1ee0f0c0957745cefec528a 589 Gene3D G3DSA:1.10.540.10 5 160 1.2E-24 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS08290 1715d2a6e1ee0f0c0957745cefec528a 589 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 279 447 1.7E-24 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS08290 1715d2a6e1ee0f0c0957745cefec528a 589 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 7.2E-14 T 29-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CHH28_RS08290 1715d2a6e1ee0f0c0957745cefec528a 589 Gene3D G3DSA:1.20.140.10 272 463 1.5E-41 T 29-03-2018 CHH28_RS08290 1715d2a6e1ee0f0c0957745cefec528a 589 Gene3D G3DSA:2.40.110.10 161 270 1.0E-24 T 29-03-2018 CHH28_RS09705 17503bc8f6ce3627154eaa9e3e49dc43 329 Pfam PF01207 Dihydrouridine synthase (Dus) 14 316 6.4E-107 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CHH28_RS09705 17503bc8f6ce3627154eaa9e3e49dc43 329 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 4 319 2.4E-123 T 29-03-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 CHH28_RS09705 17503bc8f6ce3627154eaa9e3e49dc43 329 SUPERFAMILY SSF51395 11 318 1.34E-86 T 29-03-2018 CHH28_RS09705 17503bc8f6ce3627154eaa9e3e49dc43 329 PIRSF PIRSF006621 2 327 1.3E-102 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CHH28_RS09705 17503bc8f6ce3627154eaa9e3e49dc43 329 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 2 322 48.608 T 29-03-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 CHH28_RS09705 17503bc8f6ce3627154eaa9e3e49dc43 329 Gene3D G3DSA:1.10.1200.80 253 328 1.4E-22 T 29-03-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CHH28_RS09705 17503bc8f6ce3627154eaa9e3e49dc43 329 Gene3D G3DSA:3.20.20.70 7 247 2.9E-56 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS09705 17503bc8f6ce3627154eaa9e3e49dc43 329 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CHH28_RS13795 902723f153f97190e8cdaeaf1976ee35 607 Gene3D G3DSA:3.40.50.300 345 599 1.1E-72 T 29-03-2018 CHH28_RS13795 902723f153f97190e8cdaeaf1976ee35 607 SUPERFAMILY SSF52540 347 593 7.17E-87 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS13795 902723f153f97190e8cdaeaf1976ee35 607 Pfam PF00005 ABC transporter 374 523 5.9E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS13795 902723f153f97190e8cdaeaf1976ee35 607 SUPERFAMILY SSF90123 20 341 2.35E-62 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS13795 902723f153f97190e8cdaeaf1976ee35 607 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS13795 902723f153f97190e8cdaeaf1976ee35 607 Pfam PF00664 ABC transporter transmembrane region 35 312 2.3E-36 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS13795 902723f153f97190e8cdaeaf1976ee35 607 Gene3D G3DSA:1.20.1560.10 18 344 2.2E-52 T 29-03-2018 CHH28_RS13795 902723f153f97190e8cdaeaf1976ee35 607 SMART SM00382 383 575 1.6E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS14630 d10d214a6de6b713eb3e12fd03a5a93a 259 Gene3D G3DSA:3.90.1240.10 72 214 1.2E-7 T 29-03-2018 CHH28_RS14630 d10d214a6de6b713eb3e12fd03a5a93a 259 Pfam PF14891 Effector protein 84 231 8.2E-13 T 29-03-2018 IPR028208 Effector protein NleD-like CHH28_RS10780 2d5cd129080724e425857775ac27e2a3 155 SUPERFAMILY SSF53850 55 123 1.09E-10 T 29-03-2018 CHH28_RS10780 2d5cd129080724e425857775ac27e2a3 155 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 76 121 5.9E-7 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS10780 2d5cd129080724e425857775ac27e2a3 155 Gene3D G3DSA:3.40.190.10 6 138 1.9E-11 T 29-03-2018 CHH28_RS01035 2995c605e7343d858a93a79400b28f24 429 Pfam PF01979 Amidohydrolase family 62 422 1.5E-62 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CHH28_RS01035 2995c605e7343d858a93a79400b28f24 429 Gene3D G3DSA:2.30.40.10 9 71 1.5E-8 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS01035 2995c605e7343d858a93a79400b28f24 429 Gene3D G3DSA:3.20.20.140 72 365 7.4E-63 T 29-03-2018 CHH28_RS01035 2995c605e7343d858a93a79400b28f24 429 SUPERFAMILY SSF51338 32 64 6.72E-7 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS01035 2995c605e7343d858a93a79400b28f24 429 SUPERFAMILY SSF51338 365 427 6.72E-7 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS01035 2995c605e7343d858a93a79400b28f24 429 SUPERFAMILY SSF51556 64 366 3.62E-93 T 29-03-2018 IPR032466 Metal-dependent hydrolase CHH28_RS01035 2995c605e7343d858a93a79400b28f24 429 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 20 419 6.3E-175 T 29-03-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 CHH28_RS04820 722323edb89bc6538bf3d1668df97b02 206 SUPERFAMILY SSF52833 42 203 1.21E-42 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS04820 722323edb89bc6538bf3d1668df97b02 206 Gene3D G3DSA:3.40.30.10 41 201 7.0E-27 T 29-03-2018 CHH28_RS04820 722323edb89bc6538bf3d1668df97b02 206 Pfam PF02630 SCO1/SenC 46 180 7.6E-29 T 29-03-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS05075 afd58bb4644bae4559033ea73d833547 554 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 263 550 6.7E-130 T 29-03-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type CHH28_RS05075 afd58bb4644bae4559033ea73d833547 554 Pfam PF02653 Branched-chain amino acid transport system / permease component 267 536 5.6E-49 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CHH28_RS05075 afd58bb4644bae4559033ea73d833547 554 Gene3D G3DSA:1.10.3470.10 196 541 1.1E-54 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CHH28_RS09980 a712be0ee872efab2a3802957629f3f8 258 SUPERFAMILY SSF51735 4 241 9.46E-69 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS09980 a712be0ee872efab2a3802957629f3f8 258 Pfam PF00106 short chain dehydrogenase 10 203 6.3E-56 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS09980 a712be0ee872efab2a3802957629f3f8 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.2E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS09980 a712be0ee872efab2a3802957629f3f8 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.2E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS09980 a712be0ee872efab2a3802957629f3f8 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.2E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS09980 a712be0ee872efab2a3802957629f3f8 258 Gene3D G3DSA:3.40.50.720 1 246 1.5E-64 T 29-03-2018 CHH28_RS09980 a712be0ee872efab2a3802957629f3f8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.7E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS09980 a712be0ee872efab2a3802957629f3f8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.7E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS09980 a712be0ee872efab2a3802957629f3f8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.7E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS09980 a712be0ee872efab2a3802957629f3f8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.7E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS09980 a712be0ee872efab2a3802957629f3f8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.7E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS08200 6a675fc5c2b66d12c46d1fdfd0cb0030 157 Pfam PF10027 Predicted integral membrane protein (DUF2269) 6 153 8.8E-51 T 29-03-2018 IPR018729 Protein of unknown function DUF2269, transmembrane CHH28_RS03205 d0529ba0a3418174fb4a0284606151f6 147 Pfam PF06853 Protein of unknown function (DUF1249) 22 136 3.0E-39 T 29-03-2018 IPR009659 Protein of unknown function DUF1249 CHH28_RS04815 f8e7a3f070b4025da583f2c936633d21 263 Gene3D G3DSA:1.10.3470.10 1 263 5.8E-30 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CHH28_RS04815 f8e7a3f070b4025da583f2c936633d21 263 SUPERFAMILY SSF81345 4 259 5.62E-38 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CHH28_RS04815 f8e7a3f070b4025da583f2c936633d21 263 Pfam PF00950 ABC 3 transport family 8 257 1.6E-69 T 29-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CHH28_RS02190 b282cf8c06b0ea1081745058dfee9d45 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 79.357 T 29-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CHH28_RS02190 b282cf8c06b0ea1081745058dfee9d45 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 7.8E-30 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS02190 b282cf8c06b0ea1081745058dfee9d45 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 7.8E-30 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS02190 b282cf8c06b0ea1081745058dfee9d45 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 7.8E-30 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS02190 b282cf8c06b0ea1081745058dfee9d45 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 7.8E-30 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS02190 b282cf8c06b0ea1081745058dfee9d45 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 7.8E-30 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS02190 b282cf8c06b0ea1081745058dfee9d45 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 5.4E-51 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CHH28_RS02190 b282cf8c06b0ea1081745058dfee9d45 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.5E-45 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CHH28_RS02190 b282cf8c06b0ea1081745058dfee9d45 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 1.2E-123 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CHH28_RS02190 b282cf8c06b0ea1081745058dfee9d45 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 1.2E-24 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS02190 b282cf8c06b0ea1081745058dfee9d45 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.2E-24 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS02190 b282cf8c06b0ea1081745058dfee9d45 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.2E-24 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS02190 b282cf8c06b0ea1081745058dfee9d45 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.2E-24 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS02190 b282cf8c06b0ea1081745058dfee9d45 334 Gene3D G3DSA:3.40.50.1370 145 319 4.0E-49 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS02190 b282cf8c06b0ea1081745058dfee9d45 334 Gene3D G3DSA:3.40.50.1370 1 144 1.1E-50 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS02190 b282cf8c06b0ea1081745058dfee9d45 334 SUPERFAMILY SSF53671 4 333 1.2E-96 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS02190 b282cf8c06b0ea1081745058dfee9d45 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CHH28_RS00850 be0e76183e54d913181b5877b5f9f643 511 Gene3D G3DSA:1.10.579.10 320 495 5.5E-28 T 29-03-2018 CHH28_RS00850 be0e76183e54d913181b5877b5f9f643 511 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 6 229 1.1E-76 T 29-03-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein CHH28_RS00850 be0e76183e54d913181b5877b5f9f643 511 Gene3D G3DSA:1.25.40.80 134 319 8.1E-52 T 29-03-2018 CHH28_RS00850 be0e76183e54d913181b5877b5f9f643 511 SUPERFAMILY SSF48173 232 492 3.66E-61 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CHH28_RS01165 e3a42002326c98f46b17949b8f41d1a9 193 Gene3D G3DSA:3.10.580.10 128 191 6.0E-14 T 29-03-2018 CHH28_RS01165 e3a42002326c98f46b17949b8f41d1a9 193 Gene3D G3DSA:3.10.580.10 51 127 6.6E-15 T 29-03-2018 CHH28_RS01165 e3a42002326c98f46b17949b8f41d1a9 193 SUPERFAMILY SSF54631 63 183 5.31E-31 T 29-03-2018 CHH28_RS01165 e3a42002326c98f46b17949b8f41d1a9 193 SMART SM00116 136 184 6.7E-10 T 29-03-2018 IPR000644 CBS domain CHH28_RS01165 e3a42002326c98f46b17949b8f41d1a9 193 SMART SM00116 71 119 2.0E-6 T 29-03-2018 IPR000644 CBS domain CHH28_RS01165 e3a42002326c98f46b17949b8f41d1a9 193 Pfam PF00571 CBS domain 64 119 4.1E-12 T 29-03-2018 IPR000644 CBS domain CHH28_RS01165 e3a42002326c98f46b17949b8f41d1a9 193 Pfam PF00571 CBS domain 129 184 7.4E-13 T 29-03-2018 IPR000644 CBS domain CHH28_RS00700 1cde9b4ba427790126532563a5983c3f 486 SUPERFAMILY SSF53720 4 455 6.41E-128 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CHH28_RS00700 1cde9b4ba427790126532563a5983c3f 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CHH28_RS00700 1cde9b4ba427790126532563a5983c3f 486 Pfam PF00171 Aldehyde dehydrogenase family 11 460 4.6E-127 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS00700 1cde9b4ba427790126532563a5983c3f 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CHH28_RS00700 1cde9b4ba427790126532563a5983c3f 486 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 3 486 57.385 T 29-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 CHH28_RS00700 1cde9b4ba427790126532563a5983c3f 486 Gene3D G3DSA:3.40.605.10 1 260 9.4E-80 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS00700 1cde9b4ba427790126532563a5983c3f 486 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 5 485 4.9E-249 T 29-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 CHH28_RS00700 1cde9b4ba427790126532563a5983c3f 486 Gene3D G3DSA:3.40.309.10 261 453 9.4E-46 T 29-03-2018 CHH28_RS06635 addcc5cd928cbd856b9d39ba954a9e2b 123 Pfam PF06155 Protein of unknown function (DUF971) 6 89 1.6E-25 T 29-03-2018 IPR010376 Domain of unknown function DUF971 Reactome: R-HSA-71262 CHH28_RS19075 692ff69279d2422984a057d57a7196d3 316 Pfam PF13407 Periplasmic binding protein domain 42 299 1.6E-45 T 29-03-2018 IPR025997 Periplasmic binding protein CHH28_RS19075 692ff69279d2422984a057d57a7196d3 316 Gene3D G3DSA:3.40.50.2300 38 152 3.2E-20 T 29-03-2018 CHH28_RS19075 692ff69279d2422984a057d57a7196d3 316 Gene3D G3DSA:3.40.50.2300 153 316 1.0E-37 T 29-03-2018 CHH28_RS19075 692ff69279d2422984a057d57a7196d3 316 SUPERFAMILY SSF53822 37 315 1.09E-64 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CHH28_RS03905 2310f90d04e00d40653f07d814290eb2 230 Gene3D G3DSA:2.10.109.10 92 227 3.3E-25 T 29-03-2018 CHH28_RS03905 2310f90d04e00d40653f07d814290eb2 230 SUPERFAMILY SSF51306 96 228 8.24E-28 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CHH28_RS03905 2310f90d04e00d40653f07d814290eb2 230 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 29 77 1.3E-4 T 29-03-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 CHH28_RS03905 2310f90d04e00d40653f07d814290eb2 230 SUPERFAMILY SSF47413 31 77 2.42E-5 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CHH28_RS03905 2310f90d04e00d40653f07d814290eb2 230 Pfam PF00717 Peptidase S24-like 145 210 2.1E-13 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CHH28_RS03905 2310f90d04e00d40653f07d814290eb2 230 Gene3D G3DSA:1.10.260.40 29 86 8.0E-7 T 29-03-2018 CHH28_RS15015 c4aed5c4b532d8f8938c5947966f438d 241 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 208 6.0E-50 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CHH28_RS15015 c4aed5c4b532d8f8938c5947966f438d 241 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 21 233 8.3E-52 T 29-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CHH28_RS15015 c4aed5c4b532d8f8938c5947966f438d 241 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 37 232 1.5E-81 T 29-03-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 CHH28_RS15015 c4aed5c4b532d8f8938c5947966f438d 241 SUPERFAMILY SSF52402 5 196 5.23E-51 T 29-03-2018 CHH28_RS15015 c4aed5c4b532d8f8938c5947966f438d 241 Gene3D G3DSA:3.40.50.620 1 241 5.6E-48 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS15015 c4aed5c4b532d8f8938c5947966f438d 241 PIRSF PIRSF000857 1 238 4.0E-81 T 29-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CHH28_RS08110 7b7fb44a399ea416a2f3e646c040c158 157 Gene3D G3DSA:3.30.160.150 11 156 2.7E-27 T 29-03-2018 CHH28_RS08110 7b7fb44a399ea416a2f3e646c040c158 157 Pfam PF04390 Lipopolysaccharide-assembly 35 149 3.8E-9 T 29-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CHH28_RS08110 7b7fb44a399ea416a2f3e646c040c158 157 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 1 154 18.655 T 29-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CHH28_RS00370 d1835d81b31a197232443aa550e6f172 385 SUPERFAMILY SSF53335 135 383 1.84E-42 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS00370 d1835d81b31a197232443aa550e6f172 385 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 138 383 1.7E-55 T 29-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 CHH28_RS00370 d1835d81b31a197232443aa550e6f172 385 Pfam PF08241 Methyltransferase domain 173 267 9.5E-21 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CHH28_RS00370 d1835d81b31a197232443aa550e6f172 385 Gene3D G3DSA:3.40.50.150 133 385 1.3E-37 T 29-03-2018 CHH28_RS00370 d1835d81b31a197232443aa550e6f172 385 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 130 383 27.578 T 29-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 CHH28_RS19575 c83436f67f4a4cef6d75403edfd67334 256 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 79 173 3.4E-45 T 29-03-2018 IPR012997 Rare lipoprotein A CHH28_RS19575 c83436f67f4a4cef6d75403edfd67334 256 SUPERFAMILY SSF50685 78 166 4.45E-8 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CHH28_RS19575 c83436f67f4a4cef6d75403edfd67334 256 SUPERFAMILY SSF110997 176 252 2.48E-9 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CHH28_RS19575 c83436f67f4a4cef6d75403edfd67334 256 Gene3D G3DSA:2.40.40.10 55 169 3.4E-26 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CHH28_RS19575 c83436f67f4a4cef6d75403edfd67334 256 Pfam PF03330 Lytic transglycolase 77 166 7.2E-27 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CHH28_RS19575 c83436f67f4a4cef6d75403edfd67334 256 Pfam PF05036 Sporulation related domain 178 252 1.9E-9 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CHH28_RS19575 c83436f67f4a4cef6d75403edfd67334 256 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 6 169 24.59 T 29-03-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 CHH28_RS19575 c83436f67f4a4cef6d75403edfd67334 256 Gene3D G3DSA:3.30.70.1070 179 255 2.6E-10 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CHH28_RS12435 75e07ca958b0936c4ecb023cc16e2862 288 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 166 284 1.2E-21 T 29-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CHH28_RS12435 75e07ca958b0936c4ecb023cc16e2862 288 Gene3D G3DSA:3.40.50.720 3 156 2.9E-15 T 29-03-2018 CHH28_RS12435 75e07ca958b0936c4ecb023cc16e2862 288 Gene3D G3DSA:1.10.1040.10 166 287 6.8E-25 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CHH28_RS12435 75e07ca958b0936c4ecb023cc16e2862 288 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 29-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CHH28_RS12435 75e07ca958b0936c4ecb023cc16e2862 288 SUPERFAMILY SSF48179 166 285 1.29E-21 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CHH28_RS12435 75e07ca958b0936c4ecb023cc16e2862 288 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 148 7.0E-19 T 29-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CHH28_RS12435 75e07ca958b0936c4ecb023cc16e2862 288 SUPERFAMILY SSF51735 3 154 3.36E-22 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS12435 75e07ca958b0936c4ecb023cc16e2862 288 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 285 1.6E-49 T 29-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CHH28_RS06455 de6a790a2237c485bb40a984b42650aa 160 SUPERFAMILY SSF48452 6 132 3.04E-15 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS06455 de6a790a2237c485bb40a984b42650aa 160 SMART SM00028 35 68 130.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS06455 de6a790a2237c485bb40a984b42650aa 160 SMART SM00028 72 105 0.13 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CHH28_RS06455 de6a790a2237c485bb40a984b42650aa 160 Pfam PF12688 Tetratrico peptide repeat 39 156 1.2E-13 T 29-03-2018 CHH28_RS06455 de6a790a2237c485bb40a984b42650aa 160 Gene3D G3DSA:1.25.40.10 2 59 5.2E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS06455 de6a790a2237c485bb40a984b42650aa 160 Gene3D G3DSA:1.25.40.10 60 154 4.6E-15 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS14725 900883acc4fa71d2b7c3243f85b4b11d 388 Gene3D G3DSA:2.40.50.100 66 144 4.5E-9 T 29-03-2018 CHH28_RS14725 900883acc4fa71d2b7c3243f85b4b11d 388 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 358 3.2E-32 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CHH28_RS14725 900883acc4fa71d2b7c3243f85b4b11d 388 Pfam PF13437 HlyD family secretion protein 179 286 7.7E-13 T 29-03-2018 CHH28_RS14725 900883acc4fa71d2b7c3243f85b4b11d 388 SUPERFAMILY SSF111369 55 293 1.06E-19 T 29-03-2018 CHH28_RS14725 900883acc4fa71d2b7c3243f85b4b11d 388 Gene3D G3DSA:2.40.50.100 167 375 3.3E-4 T 29-03-2018 CHH28_RS10510 af96712a942d70245c483a87b45d5710 393 Pfam PF00108 Thiolase, N-terminal domain 6 261 3.7E-82 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CHH28_RS10510 af96712a942d70245c483a87b45d5710 393 SUPERFAMILY SSF53901 271 392 7.56E-41 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS10510 af96712a942d70245c483a87b45d5710 393 PIRSF PIRSF000429 1 393 3.3E-112 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CHH28_RS10510 af96712a942d70245c483a87b45d5710 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 2.3E-45 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CHH28_RS10510 af96712a942d70245c483a87b45d5710 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CHH28_RS10510 af96712a942d70245c483a87b45d5710 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CHH28_RS10510 af96712a942d70245c483a87b45d5710 393 Gene3D G3DSA:3.40.47.10 3 265 3.7E-54 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS10510 af96712a942d70245c483a87b45d5710 393 SUPERFAMILY SSF53901 5 269 6.43E-77 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS10510 af96712a942d70245c483a87b45d5710 393 Gene3D G3DSA:3.40.47.10 266 390 2.5E-32 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS10510 af96712a942d70245c483a87b45d5710 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 391 5.1E-124 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CHH28_RS03150 0bc2b2e81f3402f1961619c9a2b37f3b 464 SUPERFAMILY SSF55154 1 200 6.38E-40 T 29-03-2018 IPR033469 CYTH-like domain Reactome: R-HSA-196819 CHH28_RS03150 0bc2b2e81f3402f1961619c9a2b37f3b 464 Gene3D G3DSA:2.40.320.10 1 203 7.6E-43 T 29-03-2018 CHH28_RS03150 0bc2b2e81f3402f1961619c9a2b37f3b 464 SMART SM01118 2 202 7.8E-37 T 29-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CHH28_RS03150 0bc2b2e81f3402f1961619c9a2b37f3b 464 Pfam PF01928 CYTH domain 3 196 1.6E-24 T 29-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CHH28_RS03785 d6e5e05d2a205709f28216269de6d938 459 Gene3D G3DSA:1.10.287.370 146 445 1.8E-5 T 29-03-2018 CHH28_RS03785 d6e5e05d2a205709f28216269de6d938 459 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 125 444 8.5E-81 T 29-03-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX CHH28_RS11615 27c9ad24dcc0f4ee2d051acc4c942382 770 SUPERFAMILY SSF46626 748 770 1.05E-7 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS11615 27c9ad24dcc0f4ee2d051acc4c942382 770 SUPERFAMILY SSF46626 549 643 1.05E-7 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS11615 27c9ad24dcc0f4ee2d051acc4c942382 770 Gene3D G3DSA:1.10.760.10 511 770 2.3E-10 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS11615 27c9ad24dcc0f4ee2d051acc4c942382 770 Gene3D G3DSA:2.60.40.10 71 180 6.1E-7 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS11615 27c9ad24dcc0f4ee2d051acc4c942382 770 Gene3D G3DSA:1.10.760.10 336 510 6.5E-4 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS04590 758253fa15f3ec500e0ae79e7b95066e 273 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 118 193 1.7E-10 T 29-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CHH28_RS04590 758253fa15f3ec500e0ae79e7b95066e 273 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 271 31.621 T 29-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CHH28_RS04590 758253fa15f3ec500e0ae79e7b95066e 273 Gene3D G3DSA:3.40.50.720 114 273 5.3E-29 T 29-03-2018 CHH28_RS04590 758253fa15f3ec500e0ae79e7b95066e 273 Gene3D G3DSA:3.40.50.10860 1 113 1.3E-37 T 29-03-2018 CHH28_RS04590 758253fa15f3ec500e0ae79e7b95066e 273 SUPERFAMILY SSF51735 103 272 1.0E-40 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS04590 758253fa15f3ec500e0ae79e7b95066e 273 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 272 1.5E-79 T 29-03-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CHH28_RS04590 758253fa15f3ec500e0ae79e7b95066e 273 SUPERFAMILY SSF53223 2 102 1.04E-31 T 29-03-2018 CHH28_RS04590 758253fa15f3ec500e0ae79e7b95066e 273 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 2.5E-24 T 29-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CHH28_RS03145 9abe278b4f4a8ee7e6581037e1b76b9f 447 Gene3D G3DSA:3.40.630.30 303 445 4.4E-23 T 29-03-2018 CHH28_RS03145 9abe278b4f4a8ee7e6581037e1b76b9f 447 Pfam PF00583 Acetyltransferase (GNAT) family 335 407 1.2E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS03145 9abe278b4f4a8ee7e6581037e1b76b9f 447 Gene3D G3DSA:3.40.1160.10 20 301 2.0E-57 T 29-03-2018 CHH28_RS03145 9abe278b4f4a8ee7e6581037e1b76b9f 447 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 447 189.368 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CHH28_RS03145 9abe278b4f4a8ee7e6581037e1b76b9f 447 SUPERFAMILY SSF53633 16 300 3.63E-66 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CHH28_RS03145 9abe278b4f4a8ee7e6581037e1b76b9f 447 Pfam PF00696 Amino acid kinase family 38 274 5.7E-26 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CHH28_RS03145 9abe278b4f4a8ee7e6581037e1b76b9f 447 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 21 444 5.3E-174 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CHH28_RS03145 9abe278b4f4a8ee7e6581037e1b76b9f 447 SUPERFAMILY SSF55729 254 418 8.06E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS03145 9abe278b4f4a8ee7e6581037e1b76b9f 447 PIRSF PIRSF000423 12 447 1.9E-177 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CHH28_RS07075 279b47adba8674dfabeb19c5c1eca2a2 354 PIRSF PIRSF001359 1 329 1.4E-83 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CHH28_RS07075 279b47adba8674dfabeb19c5c1eca2a2 354 Gene3D G3DSA:3.20.20.70 1 331 6.3E-106 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS07075 279b47adba8674dfabeb19c5c1eca2a2 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CHH28_RS07075 279b47adba8674dfabeb19c5c1eca2a2 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CHH28_RS07075 279b47adba8674dfabeb19c5c1eca2a2 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 9.0E-203 T 29-03-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 CHH28_RS07075 279b47adba8674dfabeb19c5c1eca2a2 354 SUPERFAMILY SSF51569 3 328 2.34E-108 T 29-03-2018 CHH28_RS07075 279b47adba8674dfabeb19c5c1eca2a2 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 1.3E-97 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CHH28_RS07075 279b47adba8674dfabeb19c5c1eca2a2 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 327 6.4E-94 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CHH28_RS16940 cf7b8f767f3ee922b7373042b017e109 316 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 29-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CHH28_RS16940 cf7b8f767f3ee922b7373042b017e109 316 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 309 1.2E-130 T 29-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CHH28_RS16940 cf7b8f767f3ee922b7373042b017e109 316 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 296 8.2E-69 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CHH28_RS16940 cf7b8f767f3ee922b7373042b017e109 316 Gene3D G3DSA:3.40.50.1100 18 133 3.7E-33 T 29-03-2018 CHH28_RS16940 cf7b8f767f3ee922b7373042b017e109 316 TIGRFAM TIGR01139 cysK: cysteine synthase A 7 309 1.5E-134 T 29-03-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CHH28_RS16940 cf7b8f767f3ee922b7373042b017e109 316 Gene3D G3DSA:3.40.50.1100 134 312 7.3E-57 T 29-03-2018 CHH28_RS16940 cf7b8f767f3ee922b7373042b017e109 316 SUPERFAMILY SSF53686 3 306 4.06E-98 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CHH28_RS12695 feb5070b1eb277ea4390d2d9c96957ca 237 Gene3D G3DSA:3.40.50.1360 5 230 4.6E-41 T 29-03-2018 CHH28_RS12695 feb5070b1eb277ea4390d2d9c96957ca 237 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 7 202 2.0E-48 T 29-03-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 CHH28_RS12695 feb5070b1eb277ea4390d2d9c96957ca 237 SUPERFAMILY SSF100950 7 202 3.14E-47 T 29-03-2018 CHH28_RS12695 feb5070b1eb277ea4390d2d9c96957ca 237 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 203 3.0E-46 T 29-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 CHH28_RS18090 57ad87e2a435fcff2eb4966c21f81002 201 SUPERFAMILY SSF53271 5 167 9.94E-21 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CHH28_RS18090 57ad87e2a435fcff2eb4966c21f81002 201 Gene3D G3DSA:3.40.50.2020 1 186 4.3E-16 T 29-03-2018 CHH28_RS18090 57ad87e2a435fcff2eb4966c21f81002 201 Pfam PF00156 Phosphoribosyl transferase domain 3 154 1.9E-8 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CHH28_RS05125 dd2d1a8281d4ec5ca00341e15422d6a8 236 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 26 189 5.0E-13 T 29-03-2018 IPR010239 Conserved hypothetical protein CHP02001 CHH28_RS05125 dd2d1a8281d4ec5ca00341e15422d6a8 236 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 231 1.5E-17 T 29-03-2018 IPR010239 Conserved hypothetical protein CHP02001 CHH28_RS15930 e70f82b31d80161fc7e03ed9fa877cf0 174 Gene3D G3DSA:2.160.10.10 1 173 3.0E-37 T 29-03-2018 CHH28_RS15930 e70f82b31d80161fc7e03ed9fa877cf0 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 120 5.8E-8 T 29-03-2018 IPR001451 Hexapeptide repeat CHH28_RS15930 e70f82b31d80161fc7e03ed9fa877cf0 174 SUPERFAMILY SSF51161 4 169 1.66E-43 T 29-03-2018 IPR011004 Trimeric LpxA-like CHH28_RS01865 4cf9e45fdba6e320b07922de2df1bb26 290 SUPERFAMILY SSF51735 2 95 4.57E-8 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS01865 4cf9e45fdba6e320b07922de2df1bb26 290 Gene3D G3DSA:3.90.25.10 1 97 5.2E-7 T 29-03-2018 CHH28_RS01865 4cf9e45fdba6e320b07922de2df1bb26 290 Pfam PF02397 Bacterial sugar transferase 109 278 5.6E-42 T 29-03-2018 IPR003362 Bacterial sugar transferase CHH28_RS13945 875eb4fcbdc135b339011446060a9fc8 280 Hamap MF_00697 UPF0276 protein . 10 278 43.872 T 29-03-2018 IPR007801 Uncharacterised protein family UPF0276 CHH28_RS13945 875eb4fcbdc135b339011446060a9fc8 280 Gene3D G3DSA:3.20.20.150 6 279 1.2E-81 T 29-03-2018 CHH28_RS13945 875eb4fcbdc135b339011446060a9fc8 280 SUPERFAMILY SSF51658 8 266 2.16E-15 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CHH28_RS13945 875eb4fcbdc135b339011446060a9fc8 280 Pfam PF05114 Protein of unknown function (DUF692) 9 270 6.2E-102 T 29-03-2018 IPR007801 Uncharacterised protein family UPF0276 CHH28_RS01735 db72b8a049cb873a533f019b184c82e4 139 SUPERFAMILY SSF55729 7 104 3.26E-11 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS01735 db72b8a049cb873a533f019b184c82e4 139 Gene3D G3DSA:3.40.630.30 1 126 1.3E-11 T 29-03-2018 CHH28_RS01735 db72b8a049cb873a533f019b184c82e4 139 Pfam PF12568 Acetyltransferase (GNAT) domain 2 99 6.4E-17 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS00965 47fe467e3bc485cfc4265f59cc9b88e6 647 Gene3D G3DSA:1.10.287.950 318 419 2.4E-9 T 29-03-2018 CHH28_RS00965 47fe467e3bc485cfc4265f59cc9b88e6 647 Gene3D G3DSA:1.10.287.950 420 647 1.0E-53 T 29-03-2018 CHH28_RS00965 47fe467e3bc485cfc4265f59cc9b88e6 647 SUPERFAMILY SSF58104 338 647 3.14E-77 T 29-03-2018 CHH28_RS00965 47fe467e3bc485cfc4265f59cc9b88e6 647 SUPERFAMILY SSF103190 132 203 9.42E-5 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CHH28_RS00965 47fe467e3bc485cfc4265f59cc9b88e6 647 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 612 1.1E-43 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS00965 47fe467e3bc485cfc4265f59cc9b88e6 647 Gene3D G3DSA:3.30.450.20 182 295 1.0E-19 T 29-03-2018 CHH28_RS00965 47fe467e3bc485cfc4265f59cc9b88e6 647 Pfam PF02743 Cache domain 36 278 1.3E-20 T 29-03-2018 IPR033479 Double Cache domain 1 CHH28_RS00965 47fe467e3bc485cfc4265f59cc9b88e6 647 Gene3D G3DSA:3.30.450.20 29 181 1.6E-14 T 29-03-2018 CHH28_RS00965 47fe467e3bc485cfc4265f59cc9b88e6 647 SMART SM00304 316 370 4.5E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS00965 47fe467e3bc485cfc4265f59cc9b88e6 647 SMART SM00283 385 646 7.9E-78 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS06235 3416084af8264885c803e5679081fb13 347 Gene3D G3DSA:3.20.20.70 1 338 2.2E-55 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS06235 3416084af8264885c803e5679081fb13 347 Pfam PF03060 Nitronate monooxygenase 3 330 4.0E-59 T 29-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CHH28_RS06235 3416084af8264885c803e5679081fb13 347 SUPERFAMILY SSF51412 1 342 5.34E-59 T 29-03-2018 CHH28_RS04940 97e9c0740c67ec53aa8aadb1fc5d12fa 117 SUPERFAMILY SSF46626 26 96 9.75E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS04940 97e9c0740c67ec53aa8aadb1fc5d12fa 117 PRINTS PR00607 Class IE cytochrome C signature 70 82 5.2E-12 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CHH28_RS04940 97e9c0740c67ec53aa8aadb1fc5d12fa 117 PRINTS PR00607 Class IE cytochrome C signature 42 52 5.2E-12 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CHH28_RS04940 97e9c0740c67ec53aa8aadb1fc5d12fa 117 PRINTS PR00607 Class IE cytochrome C signature 31 42 5.2E-12 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CHH28_RS04940 97e9c0740c67ec53aa8aadb1fc5d12fa 117 PRINTS PR00607 Class IE cytochrome C signature 85 96 5.2E-12 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CHH28_RS04940 97e9c0740c67ec53aa8aadb1fc5d12fa 117 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 26 95 2.3E-15 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS04940 97e9c0740c67ec53aa8aadb1fc5d12fa 117 Gene3D G3DSA:1.10.760.10 25 99 2.5E-11 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS15810 5dbeb57d3341d60532d598d5f183caff 290 Gene3D G3DSA:3.90.1200.10 49 268 1.3E-16 T 29-03-2018 CHH28_RS15810 5dbeb57d3341d60532d598d5f183caff 290 Pfam PF01636 Phosphotransferase enzyme family 58 231 2.4E-11 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CHH28_RS15810 5dbeb57d3341d60532d598d5f183caff 290 SUPERFAMILY SSF56112 8 237 1.73E-21 T 29-03-2018 IPR011009 Protein kinase-like domain CHH28_RS06030 1d29c105954893ef9bd461a93193acc5 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 273 5.8E-133 T 29-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CHH28_RS06030 1d29c105954893ef9bd461a93193acc5 275 Gene3D G3DSA:2.40.50.140 1 114 1.2E-46 T 29-03-2018 CHH28_RS06030 1d29c105954893ef9bd461a93193acc5 275 SMART SM01382 124 252 2.2E-93 T 29-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CHH28_RS06030 1d29c105954893ef9bd461a93193acc5 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 2.2E-56 T 29-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CHH28_RS06030 1d29c105954893ef9bd461a93193acc5 275 PIRSF PIRSF002158 9 275 6.4E-102 T 29-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06030 1d29c105954893ef9bd461a93193acc5 275 Gene3D G3DSA:2.30.30.30 119 195 4.2E-31 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CHH28_RS06030 1d29c105954893ef9bd461a93193acc5 275 Gene3D G3DSA:4.10.950.10 197 273 1.0E-37 T 29-03-2018 IPR014726 Ribosomal protein L2, domain 3 CHH28_RS06030 1d29c105954893ef9bd461a93193acc5 275 SUPERFAMILY SSF50104 126 272 6.62E-62 T 29-03-2018 IPR008991 Translation protein SH3-like domain CHH28_RS06030 1d29c105954893ef9bd461a93193acc5 275 SMART SM01383 42 118 1.4E-45 T 29-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06030 1d29c105954893ef9bd461a93193acc5 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 48.033 T 29-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CHH28_RS06030 1d29c105954893ef9bd461a93193acc5 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 29-03-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06030 1d29c105954893ef9bd461a93193acc5 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.2E-33 T 29-03-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06030 1d29c105954893ef9bd461a93193acc5 275 SUPERFAMILY SSF50249 3 125 3.36E-49 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS17135 89af76eae65e01e7daeefda99d176602 223 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 10 211 4.4E-54 T 29-03-2018 CHH28_RS01020 96655710a6c8834d50ed8ba533957fc1 173 Gene3D G3DSA:3.40.30.10 27 173 1.3E-8 T 29-03-2018 CHH28_RS01020 96655710a6c8834d50ed8ba533957fc1 173 Pfam PF02630 SCO1/SenC 31 112 8.5E-7 T 29-03-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS01020 96655710a6c8834d50ed8ba533957fc1 173 SUPERFAMILY SSF52833 39 159 4.48E-14 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS12330 e330033750895cf789b46e707252735e 369 SUPERFAMILY SSF56935 25 316 2.88E-31 T 29-03-2018 CHH28_RS12330 e330033750895cf789b46e707252735e 369 Gene3D G3DSA:2.40.160.10 11 367 1.3E-34 T 29-03-2018 CHH28_RS12330 e330033750895cf789b46e707252735e 369 Pfam PF13609 Gram-negative porin 8 314 1.9E-29 T 29-03-2018 CHH28_RS13160 5410f36ac4d9ced88c7a79faa2ebb559 285 SUPERFAMILY SSF81452 4 284 5.76E-76 T 29-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13160 5410f36ac4d9ced88c7a79faa2ebb559 285 Pfam PF00510 Cytochrome c oxidase subunit III 141 284 5.7E-43 T 29-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13160 5410f36ac4d9ced88c7a79faa2ebb559 285 Pfam PF00510 Cytochrome c oxidase subunit III 5 100 2.1E-11 T 29-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13160 5410f36ac4d9ced88c7a79faa2ebb559 285 Gene3D G3DSA:1.20.120.80 68 285 2.0E-69 T 29-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13160 5410f36ac4d9ced88c7a79faa2ebb559 285 Gene3D G3DSA:1.10.287.70 2 67 2.2E-15 T 29-03-2018 CHH28_RS10630 ab216f4a7c693ea3935458efb9fc1461 428 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 49 57 2.0E-9 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CHH28_RS10630 ab216f4a7c693ea3935458efb9fc1461 428 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 79 90 2.0E-9 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CHH28_RS10630 ab216f4a7c693ea3935458efb9fc1461 428 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 136 150 2.0E-9 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CHH28_RS10630 ab216f4a7c693ea3935458efb9fc1461 428 Pfam PF00561 alpha/beta hydrolase fold 47 198 5.6E-20 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS10630 ab216f4a7c693ea3935458efb9fc1461 428 Gene3D G3DSA:3.40.50.1820 13 419 2.4E-36 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS10630 ab216f4a7c693ea3935458efb9fc1461 428 SUPERFAMILY SSF53474 41 226 7.31E-34 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS10630 ab216f4a7c693ea3935458efb9fc1461 428 SUPERFAMILY SSF53474 319 414 7.31E-34 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS00400 4ea530d0d970d78920883a12086b7514 297 Pfam PF00156 Phosphoribosyl transferase domain 133 273 2.2E-16 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CHH28_RS00400 4ea530d0d970d78920883a12086b7514 297 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 114 6.3E-21 T 29-03-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CHH28_RS00400 4ea530d0d970d78920883a12086b7514 297 Gene3D G3DSA:3.40.50.2020 149 283 7.6E-19 T 29-03-2018 CHH28_RS00400 4ea530d0d970d78920883a12086b7514 297 SUPERFAMILY SSF53271 104 277 1.31E-24 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CHH28_RS00400 4ea530d0d970d78920883a12086b7514 297 SUPERFAMILY SSF53271 6 156 4.17E-34 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CHH28_RS00400 4ea530d0d970d78920883a12086b7514 297 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 2 290 8.2E-61 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CHH28_RS00400 4ea530d0d970d78920883a12086b7514 297 SMART SM01400 1 116 1.3E-33 T 29-03-2018 CHH28_RS00400 4ea530d0d970d78920883a12086b7514 297 Gene3D G3DSA:3.40.50.2020 1 148 6.5E-35 T 29-03-2018 CHH28_RS04840 7ceb946aab85fe51abc517abe502e311 184 Gene3D G3DSA:1.20.950.20 1 184 2.2E-37 T 29-03-2018 CHH28_RS04840 7ceb946aab85fe51abc517abe502e311 184 SUPERFAMILY SSF81342 4 176 2.67E-39 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CHH28_RS04840 7ceb946aab85fe51abc517abe502e311 184 Pfam PF01292 Prokaryotic cytochrome b561 9 176 3.9E-33 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CHH28_RS09000 7659119e0d3e899c2f9f846e7a43ad87 352 Pfam PF13609 Gram-negative porin 33 338 1.1E-17 T 29-03-2018 CHH28_RS09000 7659119e0d3e899c2f9f846e7a43ad87 352 Gene3D G3DSA:2.40.160.10 11 352 2.9E-24 T 29-03-2018 CHH28_RS09000 7659119e0d3e899c2f9f846e7a43ad87 352 SUPERFAMILY SSF56935 33 352 4.12E-24 T 29-03-2018 CHH28_RS19540 92dfd72c8067b52093f9a342320d7f25 418 PIRSF PIRSF000151 1 418 9.4E-179 T 29-03-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CHH28_RS19540 92dfd72c8067b52093f9a342320d7f25 418 SUPERFAMILY SSF53720 6 417 1.83E-120 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CHH28_RS19540 92dfd72c8067b52093f9a342320d7f25 418 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 324 345 - T 29-03-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CHH28_RS19540 92dfd72c8067b52093f9a342320d7f25 418 Gene3D G3DSA:3.40.605.10 4 247 8.7E-44 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS19540 92dfd72c8067b52093f9a342320d7f25 418 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 14 407 7.9E-153 T 29-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CHH28_RS19540 92dfd72c8067b52093f9a342320d7f25 418 Pfam PF00171 Aldehyde dehydrogenase family 12 288 2.3E-18 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS19540 92dfd72c8067b52093f9a342320d7f25 418 Pfam PF00171 Aldehyde dehydrogenase family 310 374 1.4E-6 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS19540 92dfd72c8067b52093f9a342320d7f25 418 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 6 417 41.287 T 29-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CHH28_RS19540 92dfd72c8067b52093f9a342320d7f25 418 Gene3D G3DSA:3.40.605.10 248 418 3.2E-45 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CHH28_RS05625 81d8e64bfdfde8cb62ccb4bbb1bf25c5 539 Pfam PF04389 Peptidase family M28 279 490 1.3E-39 T 29-03-2018 IPR007484 Peptidase M28 CHH28_RS05625 81d8e64bfdfde8cb62ccb4bbb1bf25c5 539 Gene3D G3DSA:3.50.30.30 132 251 6.4E-21 T 29-03-2018 CHH28_RS05625 81d8e64bfdfde8cb62ccb4bbb1bf25c5 539 SUPERFAMILY SSF52025 132 245 9.29E-13 T 29-03-2018 CHH28_RS05625 81d8e64bfdfde8cb62ccb4bbb1bf25c5 539 SUPERFAMILY SSF53187 61 113 9.61E-59 T 29-03-2018 CHH28_RS05625 81d8e64bfdfde8cb62ccb4bbb1bf25c5 539 SUPERFAMILY SSF53187 263 495 9.61E-59 T 29-03-2018 CHH28_RS05625 81d8e64bfdfde8cb62ccb4bbb1bf25c5 539 Pfam PF02225 PA domain 157 254 2.1E-14 T 29-03-2018 IPR003137 PA domain CHH28_RS05625 81d8e64bfdfde8cb62ccb4bbb1bf25c5 539 Gene3D G3DSA:3.40.630.10 252 483 6.5E-30 T 29-03-2018 CHH28_RS08390 01121d4acebc21f9c92b0b95a80fac84 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 3.1E-13 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS08390 01121d4acebc21f9c92b0b95a80fac84 216 Gene3D G3DSA:1.10.357.10 76 208 9.6E-15 T 29-03-2018 CHH28_RS08390 01121d4acebc21f9c92b0b95a80fac84 216 SUPERFAMILY SSF46689 10 83 5.82E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS08390 01121d4acebc21f9c92b0b95a80fac84 216 SUPERFAMILY SSF48498 93 205 4.45E-10 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CHH28_RS08390 01121d4acebc21f9c92b0b95a80fac84 216 Gene3D G3DSA:1.10.10.60 1 48 2.3E-14 T 29-03-2018 CHH28_RS08390 01121d4acebc21f9c92b0b95a80fac84 216 Gene3D G3DSA:1.10.260.40 49 75 3.1E-7 T 29-03-2018 CHH28_RS08390 01121d4acebc21f9c92b0b95a80fac84 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 8.1E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS08390 01121d4acebc21f9c92b0b95a80fac84 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 8.1E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS04790 9b735a470080f2b02317217381e07e18 283 Pfam PF13460 NAD(P)H-binding 9 159 3.0E-17 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS04790 9b735a470080f2b02317217381e07e18 283 Gene3D G3DSA:3.40.50.720 1 281 4.6E-36 T 29-03-2018 CHH28_RS04790 9b735a470080f2b02317217381e07e18 283 SUPERFAMILY SSF51735 1 277 3.75E-41 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS13800 c2ed4c39f9bb721a230e91a05feaa422 254 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 163 252 1.6E-22 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CHH28_RS13800 c2ed4c39f9bb721a230e91a05feaa422 254 SMART SM00279 164 199 8.2E-10 T 29-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CHH28_RS13800 c2ed4c39f9bb721a230e91a05feaa422 254 SUPERFAMILY SSF47807 161 253 4.04E-23 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CHH28_RS13800 c2ed4c39f9bb721a230e91a05feaa422 254 Gene3D G3DSA:1.10.150.20 176 254 2.6E-21 T 29-03-2018 CHH28_RS13800 c2ed4c39f9bb721a230e91a05feaa422 254 SMART SM00475 1 253 7.4E-50 T 29-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CHH28_RS13800 c2ed4c39f9bb721a230e91a05feaa422 254 Gene3D G3DSA:3.40.50.1010 1 175 1.4E-39 T 29-03-2018 IPR029060 PIN domain-like CHH28_RS13800 c2ed4c39f9bb721a230e91a05feaa422 254 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 2 157 1.7E-28 T 29-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CHH28_RS13800 c2ed4c39f9bb721a230e91a05feaa422 254 SUPERFAMILY SSF88723 3 151 8.1E-33 T 29-03-2018 IPR029060 PIN domain-like CHH28_RS06560 3b3eed769b23627cb4a8a248baa65e43 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 23 137 4.2E-37 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CHH28_RS06560 3b3eed769b23627cb4a8a248baa65e43 145 Gene3D G3DSA:3.10.129.10 1 145 1.6E-26 T 29-03-2018 CHH28_RS06560 3b3eed769b23627cb4a8a248baa65e43 145 Pfam PF03061 Thioesterase superfamily 53 130 2.0E-15 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CHH28_RS06560 3b3eed769b23627cb4a8a248baa65e43 145 SUPERFAMILY SSF54637 23 140 9.58E-32 T 29-03-2018 IPR029069 HotDog domain CHH28_RS00875 dfbd0447f9b993a6d4cf1ec7d9fea148 469 Pfam PF07394 Protein of unknown function (DUF1501) 38 454 7.6E-49 T 29-03-2018 IPR010869 Protein of unknown function DUF1501 CHH28_RS00875 dfbd0447f9b993a6d4cf1ec7d9fea148 469 Gene3D G3DSA:3.40.720.10 16 462 5.5E-9 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CHH28_RS00410 30a6dbda285330a633e529103f4f8b46 461 Gene3D G3DSA:3.60.15.10 271 461 0.0014 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS00410 30a6dbda285330a633e529103f4f8b46 461 SMART SM01027 257 376 2.0E-47 T 29-03-2018 IPR022712 Beta-Casp domain CHH28_RS00410 30a6dbda285330a633e529103f4f8b46 461 Pfam PF10996 Beta-Casp domain 257 374 5.7E-25 T 29-03-2018 IPR022712 Beta-Casp domain CHH28_RS00410 30a6dbda285330a633e529103f4f8b46 461 SUPERFAMILY SSF56281 12 461 2.29E-123 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS00410 30a6dbda285330a633e529103f4f8b46 461 Gene3D G3DSA:3.60.15.10 12 270 3.6E-57 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS00410 30a6dbda285330a633e529103f4f8b46 461 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 390 453 4.5E-11 T 29-03-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CHH28_RS00410 30a6dbda285330a633e529103f4f8b46 461 Pfam PF00753 Metallo-beta-lactamase superfamily 26 204 1.0E-18 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS00410 30a6dbda285330a633e529103f4f8b46 461 SMART SM00849 23 230 3.7E-16 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS01390 a9789cc77f0cef506a275c1b2c5fb65c 549 Gene3D G3DSA:2.40.160.60 22 531 3.5E-23 T 29-03-2018 CHH28_RS01390 a9789cc77f0cef506a275c1b2c5fb65c 549 Pfam PF13729 F plasmid transfer operon, TraF, protein 48 465 3.7E-44 T 29-03-2018 IPR032811 Putative conjugal transfer protein TraF-related CHH28_RS06050 d750a579f65e9aa2705fa530210e92a2 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 29-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06050 d750a579f65e9aa2705fa530210e92a2 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.0E-49 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CHH28_RS06050 d750a579f65e9aa2705fa530210e92a2 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.805 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06050 d750a579f65e9aa2705fa530210e92a2 137 Gene3D G3DSA:3.90.1170.10 3 136 3.6E-50 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CHH28_RS06050 d750a579f65e9aa2705fa530210e92a2 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 4.4E-60 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06050 d750a579f65e9aa2705fa530210e92a2 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 6.0E-41 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06050 d750a579f65e9aa2705fa530210e92a2 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 6.0E-41 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06050 d750a579f65e9aa2705fa530210e92a2 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 6.0E-41 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06050 d750a579f65e9aa2705fa530210e92a2 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 6.0E-41 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS06050 d750a579f65e9aa2705fa530210e92a2 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 29-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06050 d750a579f65e9aa2705fa530210e92a2 137 SUPERFAMILY SSF54686 1 134 3.92E-56 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CHH28_RS17750 c0e40c84df52c44d72721c5e5b7f6361 683 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 29 670 24.98 T 29-03-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 CHH28_RS17750 c0e40c84df52c44d72721c5e5b7f6361 683 SUPERFAMILY SSF54373 495 582 4.97E-5 T 29-03-2018 CHH28_RS17750 c0e40c84df52c44d72721c5e5b7f6361 683 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 135 256 6.1E-41 T 29-03-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 CHH28_RS17750 c0e40c84df52c44d72721c5e5b7f6361 683 Gene3D G3DSA:3.40.50.150 31 264 1.3E-81 T 29-03-2018 CHH28_RS17750 c0e40c84df52c44d72721c5e5b7f6361 683 Pfam PF01266 FAD dependent oxidoreductase 285 645 1.3E-48 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CHH28_RS17750 c0e40c84df52c44d72721c5e5b7f6361 683 SUPERFAMILY SSF53335 68 223 7.52E-5 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS17750 c0e40c84df52c44d72721c5e5b7f6361 683 Gene3D G3DSA:3.50.50.60 271 683 1.6E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS17750 c0e40c84df52c44d72721c5e5b7f6361 683 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 285 674 2.5E-117 T 29-03-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 CHH28_RS17750 c0e40c84df52c44d72721c5e5b7f6361 683 SUPERFAMILY SSF51905 285 497 1.68E-35 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS17750 c0e40c84df52c44d72721c5e5b7f6361 683 SUPERFAMILY SSF51905 582 674 1.68E-35 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS18990 8a3d6d79802a69223e3b1a9f74c3bdea 156 Gene3D G3DSA:1.20.58.300 4 129 1.1E-15 T 29-03-2018 CHH28_RS18990 8a3d6d79802a69223e3b1a9f74c3bdea 156 Pfam PF05130 FlgN protein 8 145 3.9E-17 T 29-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CHH28_RS18990 8a3d6d79802a69223e3b1a9f74c3bdea 156 SUPERFAMILY SSF140566 6 129 6.41E-13 T 29-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CHH28_RS07220 895d3d176db9c92df67171bd57ba77af 238 Gene3D G3DSA:3.60.15.10 20 228 7.7E-15 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS07220 895d3d176db9c92df67171bd57ba77af 238 Pfam PF14234 Domain of unknown function (DUF4336) 18 153 1.7E-14 T 29-03-2018 IPR025638 Protein of unknown function DUF4336 CHH28_RS07220 895d3d176db9c92df67171bd57ba77af 238 SUPERFAMILY SSF56281 2 226 2.68E-11 T 29-03-2018 IPR001279 Metallo-beta-lactamase CHH28_RS05140 c7df8e9bdc70bc1c631dbfa280c069e2 389 Gene3D G3DSA:1.10.1660.10 1 148 1.4E-20 T 29-03-2018 CHH28_RS05140 c7df8e9bdc70bc1c631dbfa280c069e2 389 Gene3D G3DSA:3.40.50.150 149 387 2.1E-33 T 29-03-2018 CHH28_RS05140 c7df8e9bdc70bc1c631dbfa280c069e2 389 Pfam PF13649 Methyltransferase domain 187 281 2.2E-12 T 29-03-2018 CHH28_RS05140 c7df8e9bdc70bc1c631dbfa280c069e2 389 Pfam PF13411 MerR HTH family regulatory protein 2 69 1.7E-15 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS05140 c7df8e9bdc70bc1c631dbfa280c069e2 389 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 8.2E-5 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS05140 c7df8e9bdc70bc1c631dbfa280c069e2 389 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 8.2E-5 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS05140 c7df8e9bdc70bc1c631dbfa280c069e2 389 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 8.2E-5 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS05140 c7df8e9bdc70bc1c631dbfa280c069e2 389 SMART SM00422 2 70 1.2E-15 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS05140 c7df8e9bdc70bc1c631dbfa280c069e2 389 SUPERFAMILY SSF53335 135 385 1.16E-30 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS05140 c7df8e9bdc70bc1c631dbfa280c069e2 389 SUPERFAMILY SSF46955 2 102 4.76E-20 T 29-03-2018 IPR009061 Putative DNA-binding domain CHH28_RS10120 6f17bfc9f45964016b4c45a09813f98a 461 Pfam PF07394 Protein of unknown function (DUF1501) 39 439 9.0E-45 T 29-03-2018 IPR010869 Protein of unknown function DUF1501 CHH28_RS10120 6f17bfc9f45964016b4c45a09813f98a 461 Gene3D G3DSA:3.40.720.10 121 444 5.9E-5 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CHH28_RS00600 60f334670884accbcf86116c9fb3d53c 119 Pfam PF00144 Beta-lactamase 34 105 6.2E-16 T 29-03-2018 IPR001466 Beta-lactamase-related CHH28_RS00600 60f334670884accbcf86116c9fb3d53c 119 Gene3D G3DSA:3.40.710.10 18 117 7.9E-21 T 29-03-2018 CHH28_RS00600 60f334670884accbcf86116c9fb3d53c 119 SUPERFAMILY SSF56601 29 107 5.63E-20 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS04210 ebdd6930a1a8aaaae6d4cdd481e4f204 150 Pfam PF04134 Protein of unknown function, DUF393 23 132 9.9E-35 T 29-03-2018 IPR007263 Protein of unknown function DUF393 CHH28_RS17300 714bca2df33cbb287cd4e909cee00bef 158 SUPERFAMILY SSF52788 1 135 8.24E-34 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CHH28_RS17300 714bca2df33cbb287cd4e909cee00bef 158 Gene3D G3DSA:3.40.50.2300 1 136 1.8E-30 T 29-03-2018 CHH28_RS17300 714bca2df33cbb287cd4e909cee00bef 158 SMART SM00226 1 136 1.2E-28 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CHH28_RS17300 714bca2df33cbb287cd4e909cee00bef 158 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 132 7.3E-20 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CHH28_RS02195 0bf79de0f31b9d74e3b2af1b4cca782a 309 TIGRFAM TIGR00746 arcC: carbamate kinase 1 300 9.4E-124 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CHH28_RS02195 0bf79de0f31b9d74e3b2af1b4cca782a 309 Pfam PF00696 Amino acid kinase family 1 275 2.4E-25 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CHH28_RS02195 0bf79de0f31b9d74e3b2af1b4cca782a 309 Gene3D G3DSA:3.40.1160.10 1 301 9.2E-42 T 29-03-2018 CHH28_RS02195 0bf79de0f31b9d74e3b2af1b4cca782a 309 PRINTS PR01469 Bacterial carbamate kinase signature 71 89 3.2E-65 T 29-03-2018 CHH28_RS02195 0bf79de0f31b9d74e3b2af1b4cca782a 309 PRINTS PR01469 Bacterial carbamate kinase signature 205 220 3.2E-65 T 29-03-2018 CHH28_RS02195 0bf79de0f31b9d74e3b2af1b4cca782a 309 PRINTS PR01469 Bacterial carbamate kinase signature 151 170 3.2E-65 T 29-03-2018 CHH28_RS02195 0bf79de0f31b9d74e3b2af1b4cca782a 309 PRINTS PR01469 Bacterial carbamate kinase signature 103 122 3.2E-65 T 29-03-2018 CHH28_RS02195 0bf79de0f31b9d74e3b2af1b4cca782a 309 PRINTS PR01469 Bacterial carbamate kinase signature 174 192 3.2E-65 T 29-03-2018 CHH28_RS02195 0bf79de0f31b9d74e3b2af1b4cca782a 309 PRINTS PR01469 Bacterial carbamate kinase signature 41 60 3.2E-65 T 29-03-2018 CHH28_RS02195 0bf79de0f31b9d74e3b2af1b4cca782a 309 PRINTS PR01469 Bacterial carbamate kinase signature 256 271 3.2E-65 T 29-03-2018 CHH28_RS02195 0bf79de0f31b9d74e3b2af1b4cca782a 309 SUPERFAMILY SSF53633 1 299 1.57E-73 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CHH28_RS02195 0bf79de0f31b9d74e3b2af1b4cca782a 309 PIRSF PIRSF000723 1 301 7.0E-113 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CHH28_RS12350 47d9d86c7464a2f13e8f4877ac7da3a0 390 Pfam PF12094 Protein of unknown function (DUF3570) 7 371 1.2E-58 T 29-03-2018 IPR021953 Protein of unknown function DUF3570 CHH28_RS17080 357caf443baf6fad5bafbab9198b8328 243 Pfam PF00106 short chain dehydrogenase 8 200 2.1E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17080 357caf443baf6fad5bafbab9198b8328 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.9E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17080 357caf443baf6fad5bafbab9198b8328 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.9E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17080 357caf443baf6fad5bafbab9198b8328 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 5.9E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17080 357caf443baf6fad5bafbab9198b8328 243 Gene3D G3DSA:3.40.50.720 4 243 4.0E-29 T 29-03-2018 CHH28_RS17080 357caf443baf6fad5bafbab9198b8328 243 SUPERFAMILY SSF51735 7 243 4.13E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS09620 92360d7257e2c1f4c15f6ff9f6ae264f 451 SUPERFAMILY SSF52540 135 376 7.07E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09620 92360d7257e2c1f4c15f6ff9f6ae264f 451 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 159 172 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CHH28_RS09620 92360d7257e2c1f4c15f6ff9f6ae264f 451 SUPERFAMILY SSF46689 349 450 5.82E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS09620 92360d7257e2c1f4c15f6ff9f6ae264f 451 Pfam PF00072 Response regulator receiver domain 7 115 1.2E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS09620 92360d7257e2c1f4c15f6ff9f6ae264f 451 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 221 236 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CHH28_RS09620 92360d7257e2c1f4c15f6ff9f6ae264f 451 Gene3D G3DSA:1.10.8.60 308 380 1.5E-23 T 29-03-2018 CHH28_RS09620 92360d7257e2c1f4c15f6ff9f6ae264f 451 Gene3D G3DSA:3.40.50.2300 1 142 2.2E-30 T 29-03-2018 CHH28_RS09620 92360d7257e2c1f4c15f6ff9f6ae264f 451 SUPERFAMILY SSF52172 1 180 1.07E-39 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS09620 92360d7257e2c1f4c15f6ff9f6ae264f 451 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 348 357 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CHH28_RS09620 92360d7257e2c1f4c15f6ff9f6ae264f 451 Pfam PF00158 Sigma-54 interaction domain 135 301 1.7E-68 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CHH28_RS09620 92360d7257e2c1f4c15f6ff9f6ae264f 451 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 414 431 1.4E-9 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS09620 92360d7257e2c1f4c15f6ff9f6ae264f 451 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 431 451 1.4E-9 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS09620 92360d7257e2c1f4c15f6ff9f6ae264f 451 Gene3D G3DSA:1.10.10.60 391 451 1.3E-16 T 29-03-2018 CHH28_RS09620 92360d7257e2c1f4c15f6ff9f6ae264f 451 SMART SM00382 155 298 6.2E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS09620 92360d7257e2c1f4c15f6ff9f6ae264f 451 Gene3D G3DSA:3.40.50.300 143 307 1.3E-24 T 29-03-2018 CHH28_RS09620 92360d7257e2c1f4c15f6ff9f6ae264f 451 SMART SM00448 4 115 3.1E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS09620 92360d7257e2c1f4c15f6ff9f6ae264f 451 Pfam PF02954 Bacterial regulatory protein, Fis family 408 448 4.1E-15 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS15115 7c75bcaf8d0c5b50213e6e87115c8060 289 Gene3D G3DSA:3.40.190.10 177 253 4.4E-17 T 29-03-2018 CHH28_RS15115 7c75bcaf8d0c5b50213e6e87115c8060 289 SUPERFAMILY SSF53850 87 285 3.75E-41 T 29-03-2018 CHH28_RS15115 7c75bcaf8d0c5b50213e6e87115c8060 289 Gene3D G3DSA:3.40.190.10 87 176 3.0E-22 T 29-03-2018 CHH28_RS15115 7c75bcaf8d0c5b50213e6e87115c8060 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS15115 7c75bcaf8d0c5b50213e6e87115c8060 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS15115 7c75bcaf8d0c5b50213e6e87115c8060 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS15115 7c75bcaf8d0c5b50213e6e87115c8060 289 SUPERFAMILY SSF46785 1 87 1.57E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS15115 7c75bcaf8d0c5b50213e6e87115c8060 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 6.8E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS15115 7c75bcaf8d0c5b50213e6e87115c8060 289 Pfam PF03466 LysR substrate binding domain 87 285 9.7E-43 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS15115 7c75bcaf8d0c5b50213e6e87115c8060 289 Gene3D G3DSA:1.10.10.10 1 83 3.5E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS02130 c20e480d3bde79e9d9f5541402e7c7c4 200 SUPERFAMILY SSF55729 18 163 5.23E-14 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS02130 c20e480d3bde79e9d9f5541402e7c7c4 200 Gene3D G3DSA:3.40.630.30 12 179 6.8E-16 T 29-03-2018 CHH28_RS12125 30b14eff9f729ac5fb10c7522a8da73c 208 SUPERFAMILY SSF56925 41 208 4.19E-24 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS12125 30b14eff9f729ac5fb10c7522a8da73c 208 Pfam PF03922 OmpW family 21 208 2.0E-48 T 29-03-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CHH28_RS12125 30b14eff9f729ac5fb10c7522a8da73c 208 Gene3D G3DSA:2.40.160.20 20 208 4.4E-27 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS19100 4ad4d5a6f49e0eddd1fa88224723a027 119 SMART SM00422 1 69 1.2E-19 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS19100 4ad4d5a6f49e0eddd1fa88224723a027 119 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.3E-6 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS19100 4ad4d5a6f49e0eddd1fa88224723a027 119 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 3.3E-6 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS19100 4ad4d5a6f49e0eddd1fa88224723a027 119 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.3E-6 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS19100 4ad4d5a6f49e0eddd1fa88224723a027 119 SUPERFAMILY SSF46955 1 114 1.87E-26 T 29-03-2018 IPR009061 Putative DNA-binding domain CHH28_RS19100 4ad4d5a6f49e0eddd1fa88224723a027 119 Pfam PF13411 MerR HTH family regulatory protein 1 66 6.9E-18 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS19100 4ad4d5a6f49e0eddd1fa88224723a027 119 Gene3D G3DSA:1.10.1660.10 55 119 5.0E-12 T 29-03-2018 CHH28_RS19100 4ad4d5a6f49e0eddd1fa88224723a027 119 Gene3D G3DSA:1.10.1660.10 1 54 2.8E-20 T 29-03-2018 CHH28_RS01975 f43e35673bb7ee2147fead10862f80f9 324 SUPERFAMILY SSF51735 2 319 6.72E-74 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS01975 f43e35673bb7ee2147fead10862f80f9 324 Gene3D G3DSA:3.90.25.10 245 323 1.9E-20 T 29-03-2018 CHH28_RS01975 f43e35673bb7ee2147fead10862f80f9 324 Gene3D G3DSA:3.90.25.10 200 244 1.1E-23 T 29-03-2018 CHH28_RS01975 f43e35673bb7ee2147fead10862f80f9 324 Gene3D G3DSA:3.40.50.720 1 199 1.1E-24 T 29-03-2018 CHH28_RS01975 f43e35673bb7ee2147fead10862f80f9 324 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 2 323 50.942 T 29-03-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 CHH28_RS01975 f43e35673bb7ee2147fead10862f80f9 324 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 313 8.5E-125 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS04160 6c4db13b2cd7a9adf5e14370e7aa5007 276 Gene3D G3DSA:3.90.226.10 2 211 6.8E-62 T 29-03-2018 CHH28_RS04160 6c4db13b2cd7a9adf5e14370e7aa5007 276 Pfam PF00378 Enoyl-CoA hydratase/isomerase 6 255 5.8E-59 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CHH28_RS04160 6c4db13b2cd7a9adf5e14370e7aa5007 276 Gene3D G3DSA:1.10.12.10 212 259 1.7E-12 T 29-03-2018 IPR014748 Crontonase, C-terminal CHH28_RS04160 6c4db13b2cd7a9adf5e14370e7aa5007 276 SUPERFAMILY SSF52096 2 255 6.26E-80 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS07765 4fafe9a4b42e3ee71ef55950c03e8253 452 Gene3D G3DSA:2.50.20.10 157 448 6.0E-59 T 29-03-2018 CHH28_RS07765 4fafe9a4b42e3ee71ef55950c03e8253 452 Pfam PF07044 Protein of unknown function (DUF1329) 82 447 7.6E-162 T 29-03-2018 IPR010752 Protein of unknown function DUF1329 CHH28_RS15240 c6731c94798664f21393e33212ee0a55 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 160 3.0E-27 T 29-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CHH28_RS12955 3d1013e55d162c50fba8baa9f761a55d 206 Gene3D G3DSA:3.40.50.300 43 159 8.0E-31 T 29-03-2018 CHH28_RS12955 3d1013e55d162c50fba8baa9f761a55d 206 SUPERFAMILY SSF52540 43 156 7.22E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS12955 3d1013e55d162c50fba8baa9f761a55d 206 PIRSF PIRSF037290 1 206 1.3E-56 T 29-03-2018 IPR017166 Uncharacterised conserved protein UCP037290 CHH28_RS12955 3d1013e55d162c50fba8baa9f761a55d 206 Pfam PF03846 Cell division inhibitor SulA 44 130 1.2E-8 T 29-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CHH28_RS13195 700211330649207e29daed8ce56d75a7 230 Gene3D G3DSA:1.10.10.60 185 229 2.1E-9 T 29-03-2018 CHH28_RS13195 700211330649207e29daed8ce56d75a7 230 Gene3D G3DSA:1.10.10.60 80 184 5.5E-9 T 29-03-2018 CHH28_RS13195 700211330649207e29daed8ce56d75a7 230 SUPERFAMILY SSF46689 180 228 1.05E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS13195 700211330649207e29daed8ce56d75a7 230 Pfam PF12833 Helix-turn-helix domain 150 227 3.3E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS13195 700211330649207e29daed8ce56d75a7 230 SMART SM00342 144 226 1.2E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS00830 e46ddaf8e4e734450b6bed5e7c1beefc 273 SUPERFAMILY SSF161098 67 257 8.76E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS00830 e46ddaf8e4e734450b6bed5e7c1beefc 273 Gene3D G3DSA:1.10.3720.10 3 262 1.0E-36 T 29-03-2018 CHH28_RS00830 e46ddaf8e4e734450b6bed5e7c1beefc 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 264 1.3E-29 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS08580 870d234fd9db19b92d6608c4f42dfef1 199 SUPERFAMILY SSF52972 1 184 4.71E-61 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CHH28_RS08580 870d234fd9db19b92d6608c4f42dfef1 199 Hamap MF_00528 Septum formation protein Maf [maf]. 1 189 32.886 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CHH28_RS08580 870d234fd9db19b92d6608c4f42dfef1 199 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 1.3E-56 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CHH28_RS08580 870d234fd9db19b92d6608c4f42dfef1 199 Pfam PF02545 Maf-like protein 2 184 5.1E-57 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CHH28_RS08580 870d234fd9db19b92d6608c4f42dfef1 199 PIRSF PIRSF006305 1 191 2.1E-56 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CHH28_RS08580 870d234fd9db19b92d6608c4f42dfef1 199 Gene3D G3DSA:3.90.950.10 1 189 3.2E-67 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CHH28_RS00300 35368da64b730bd5b831281ffc0eeb15 486 SUPERFAMILY SSF53623 107 324 4.32E-72 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CHH28_RS00300 35368da64b730bd5b831281ffc0eeb15 486 Pfam PF08245 Mur ligase middle domain 126 307 1.6E-29 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CHH28_RS00300 35368da64b730bd5b831281ffc0eeb15 486 Gene3D G3DSA:3.40.50.720 7 109 4.3E-16 T 29-03-2018 CHH28_RS00300 35368da64b730bd5b831281ffc0eeb15 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 341 416 4.3E-21 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CHH28_RS00300 35368da64b730bd5b831281ffc0eeb15 486 SUPERFAMILY SSF51984 22 108 1.57E-28 T 29-03-2018 CHH28_RS00300 35368da64b730bd5b831281ffc0eeb15 486 SUPERFAMILY SSF53244 326 474 3.66E-43 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CHH28_RS00300 35368da64b730bd5b831281ffc0eeb15 486 Pfam PF01225 Mur ligase family, catalytic domain 23 120 1.9E-27 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CHH28_RS00300 35368da64b730bd5b831281ffc0eeb15 486 Gene3D G3DSA:3.90.190.20 328 479 4.3E-31 T 29-03-2018 CHH28_RS00300 35368da64b730bd5b831281ffc0eeb15 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 24 473 1.8E-173 T 29-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS00300 35368da64b730bd5b831281ffc0eeb15 486 Gene3D G3DSA:3.40.1190.10 110 327 1.2E-51 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CHH28_RS00300 35368da64b730bd5b831281ffc0eeb15 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 21 479 42.623 T 29-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CHH28_RS12630 c6729230d5d1b33d2141ca724cdce96e 358 Pfam PF01594 AI-2E family transporter 19 345 8.6E-71 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like CHH28_RS09715 618a47cbfa96fdee7c56005f2c49496e 299 PIRSF PIRSF000401 1 297 1.1E-83 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CHH28_RS09715 618a47cbfa96fdee7c56005f2c49496e 299 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 295 31.266 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CHH28_RS09715 618a47cbfa96fdee7c56005f2c49496e 299 SUPERFAMILY SSF53335 46 293 1.34E-47 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS09715 618a47cbfa96fdee7c56005f2c49496e 299 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 295 1.6E-89 T 29-03-2018 CHH28_RS09715 618a47cbfa96fdee7c56005f2c49496e 299 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 288 1.0E-84 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CHH28_RS09715 618a47cbfa96fdee7c56005f2c49496e 299 Gene3D G3DSA:3.40.50.150 104 299 2.6E-38 T 29-03-2018 CHH28_RS01475 7773377cf7271bc7b8a72d66e0ad7c7f 245 Gene3D G3DSA:1.10.357.10 106 245 1.8E-10 T 29-03-2018 CHH28_RS01475 7773377cf7271bc7b8a72d66e0ad7c7f 245 SUPERFAMILY SSF46689 49 124 4.46E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS01475 7773377cf7271bc7b8a72d66e0ad7c7f 245 Gene3D G3DSA:1.10.10.60 9 105 1.6E-16 T 29-03-2018 CHH28_RS01475 7773377cf7271bc7b8a72d66e0ad7c7f 245 Pfam PF00440 Bacterial regulatory proteins, tetR family 60 106 3.5E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS10280 37dccf4ccd602d8fe2067a766e078f6a 829 Gene3D G3DSA:1.20.140.10 347 507 2.5E-23 T 29-03-2018 CHH28_RS10280 37dccf4ccd602d8fe2067a766e078f6a 829 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 125 230 2.7E-17 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS10280 37dccf4ccd602d8fe2067a766e078f6a 829 Pfam PF09317 Domain of unknown function (DUF1974) 512 793 2.1E-99 T 29-03-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 CHH28_RS10280 37dccf4ccd602d8fe2067a766e078f6a 829 Gene3D G3DSA:1.10.540.10 74 233 1.0E-29 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CHH28_RS10280 37dccf4ccd602d8fe2067a766e078f6a 829 SUPERFAMILY SSF56645 120 353 6.02E-43 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CHH28_RS10280 37dccf4ccd602d8fe2067a766e078f6a 829 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 358 505 1.9E-15 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS10280 37dccf4ccd602d8fe2067a766e078f6a 829 SUPERFAMILY SSF47203 358 505 6.77E-26 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS10280 37dccf4ccd602d8fe2067a766e078f6a 829 Gene3D G3DSA:2.40.110.10 234 346 1.0E-13 T 29-03-2018 CHH28_RS14375 dc0b7735eb12514082d75fe2fd3b7172 213 SMART SM00448 2 115 7.0E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS14375 dc0b7735eb12514082d75fe2fd3b7172 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS14375 dc0b7735eb12514082d75fe2fd3b7172 213 SUPERFAMILY SSF46894 135 210 8.16E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CHH28_RS14375 dc0b7735eb12514082d75fe2fd3b7172 213 Pfam PF00072 Response regulator receiver domain 4 115 1.0E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS14375 dc0b7735eb12514082d75fe2fd3b7172 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.7E-5 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS14375 dc0b7735eb12514082d75fe2fd3b7172 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.7E-5 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS14375 dc0b7735eb12514082d75fe2fd3b7172 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.7E-5 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS14375 dc0b7735eb12514082d75fe2fd3b7172 213 SUPERFAMILY SSF52172 2 143 7.97E-37 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS14375 dc0b7735eb12514082d75fe2fd3b7172 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 2.8E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS14375 dc0b7735eb12514082d75fe2fd3b7172 213 Gene3D G3DSA:1.10.10.10 127 212 5.1E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS14375 dc0b7735eb12514082d75fe2fd3b7172 213 Gene3D G3DSA:3.40.50.2300 1 126 2.6E-38 T 29-03-2018 CHH28_RS14375 dc0b7735eb12514082d75fe2fd3b7172 213 SMART SM00421 146 203 3.2E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CHH28_RS03800 77ad91d822be3632e7d7e3aa4185d01f 336 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 12 326 4.2E-86 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CHH28_RS03800 77ad91d822be3632e7d7e3aa4185d01f 336 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 15 330 1.7E-36 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CHH28_RS02445 2530d36b014afa5c960a0b6ac8609869 219 Gene3D G3DSA:1.10.10.60 5 66 1.3E-8 T 29-03-2018 CHH28_RS02445 2530d36b014afa5c960a0b6ac8609869 219 SUPERFAMILY SSF48498 93 204 7.63E-16 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CHH28_RS02445 2530d36b014afa5c960a0b6ac8609869 219 Pfam PF13305 WHG domain 99 183 1.3E-15 T 29-03-2018 IPR025996 WHG domain CHH28_RS02445 2530d36b014afa5c960a0b6ac8609869 219 Gene3D G3DSA:1.10.357.10 67 209 2.8E-17 T 29-03-2018 CHH28_RS02445 2530d36b014afa5c960a0b6ac8609869 219 SUPERFAMILY SSF46689 4 76 9.75E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS16910 2f1e60a7c1b555189c1038b1d55e3ff3 258 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 117 242 2.0E-18 T 29-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CHH28_RS16910 2f1e60a7c1b555189c1038b1d55e3ff3 258 Gene3D G3DSA:1.10.530.10 25 246 2.3E-30 T 29-03-2018 CHH28_RS06790 3984f6ab641bdba86fe969d880539968 291 Pfam PF03466 LysR substrate binding domain 88 289 7.8E-40 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS06790 3984f6ab641bdba86fe969d880539968 291 Gene3D G3DSA:3.40.190.10 184 265 7.9E-15 T 29-03-2018 CHH28_RS06790 3984f6ab641bdba86fe969d880539968 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 4.5E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS06790 3984f6ab641bdba86fe969d880539968 291 SUPERFAMILY SSF53850 87 289 1.48E-36 T 29-03-2018 CHH28_RS06790 3984f6ab641bdba86fe969d880539968 291 Gene3D G3DSA:3.40.190.10 80 183 1.1E-19 T 29-03-2018 CHH28_RS06790 3984f6ab641bdba86fe969d880539968 291 Gene3D G3DSA:1.10.10.10 1 79 1.1E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS06790 3984f6ab641bdba86fe969d880539968 291 SUPERFAMILY SSF46785 1 85 7.38E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS08955 fabdce9fa8e54e5f3929a0d7efee80bb 159 Pfam PF13673 Acetyltransferase (GNAT) domain 44 142 2.6E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS08955 fabdce9fa8e54e5f3929a0d7efee80bb 159 Gene3D G3DSA:3.40.630.30 13 155 3.1E-20 T 29-03-2018 CHH28_RS08955 fabdce9fa8e54e5f3929a0d7efee80bb 159 SUPERFAMILY SSF55729 8 142 1.34E-21 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS14680 8039d65328ef0e17c18aa86f1ca79e55 219 SUPERFAMILY SSF54423 13 58 4.32E-9 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CHH28_RS14680 8039d65328ef0e17c18aa86f1ca79e55 219 Pfam PF10411 Disulfide bond isomerase protein N-terminus 17 57 1.2E-9 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CHH28_RS14680 8039d65328ef0e17c18aa86f1ca79e55 219 Pfam PF13098 Thioredoxin-like domain 94 213 2.5E-11 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS14680 8039d65328ef0e17c18aa86f1ca79e55 219 Gene3D G3DSA:3.40.30.10 84 219 5.5E-7 T 29-03-2018 CHH28_RS14680 8039d65328ef0e17c18aa86f1ca79e55 219 Gene3D G3DSA:3.10.450.70 1 58 2.2E-11 T 29-03-2018 CHH28_RS14680 8039d65328ef0e17c18aa86f1ca79e55 219 SUPERFAMILY SSF52833 75 215 2.24E-15 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS19685 1e173ebe7acd0d9d928bce5b5d04f7f1 121 Pfam PF08888 HopJ type III effector protein 10 113 2.8E-37 T 29-03-2018 IPR014984 HopJ type III effector protein CHH28_RS19685 1e173ebe7acd0d9d928bce5b5d04f7f1 121 Gene3D G3DSA:3.20.160.10 7 114 2.4E-38 T 29-03-2018 CHH28_RS16370 dab36452c58a42112f042111e8791260 271 SUPERFAMILY SSF47413 17 63 3.1E-8 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CHH28_RS16370 dab36452c58a42112f042111e8791260 271 SMART SM00530 8 62 6.4E-4 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CHH28_RS16370 dab36452c58a42112f042111e8791260 271 Pfam PF01381 Helix-turn-helix 17 59 1.1E-5 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CHH28_RS16370 dab36452c58a42112f042111e8791260 271 Gene3D G3DSA:1.10.260.40 1 154 2.2E-9 T 29-03-2018 CHH28_RS14775 c91b7ad6bffc5bbc33a4d6b4d5d95a81 132 Gene3D G3DSA:3.10.450.50 2 118 4.7E-15 T 29-03-2018 CHH28_RS14775 c91b7ad6bffc5bbc33a4d6b4d5d95a81 132 Pfam PF14534 Domain of unknown function (DUF4440) 16 111 2.8E-11 T 29-03-2018 IPR027843 Domain of unknown function DUF4440 CHH28_RS14775 c91b7ad6bffc5bbc33a4d6b4d5d95a81 132 SUPERFAMILY SSF54427 4 119 9.89E-17 T 29-03-2018 IPR032710 NTF2-like domain CHH28_RS15695 3a20c393d86a067ce37ba3e13b8eabe0 535 SUPERFAMILY SSF56176 55 264 3.82E-43 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CHH28_RS15695 3a20c393d86a067ce37ba3e13b8eabe0 535 Pfam PF02913 FAD linked oxidases, C-terminal domain 267 529 9.1E-35 T 29-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CHH28_RS15695 3a20c393d86a067ce37ba3e13b8eabe0 535 Pfam PF01565 FAD binding domain 89 223 1.5E-31 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CHH28_RS15695 3a20c393d86a067ce37ba3e13b8eabe0 535 SUPERFAMILY SSF55103 270 534 3.6E-33 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CHH28_RS15695 3a20c393d86a067ce37ba3e13b8eabe0 535 Gene3D G3DSA:3.30.43.10 31 144 3.4E-17 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CHH28_RS15695 3a20c393d86a067ce37ba3e13b8eabe0 535 Gene3D G3DSA:3.30.465.10 145 288 1.2E-23 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CHH28_RS15695 3a20c393d86a067ce37ba3e13b8eabe0 535 Gene3D G3DSA:1.10.45.10 492 531 2.9E-6 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CHH28_RS03495 6ffab9130764cedb19cc8fb5561b930e 511 Pfam PF04262 Glutamate-cysteine ligase 2 370 1.2E-164 T 29-03-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CHH28_RS03495 6ffab9130764cedb19cc8fb5561b930e 511 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 511 194.758 T 29-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CHH28_RS03495 6ffab9130764cedb19cc8fb5561b930e 511 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 507 3.9E-183 T 29-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CHH28_RS03495 6ffab9130764cedb19cc8fb5561b930e 511 SUPERFAMILY SSF55931 3 506 6.54E-183 T 29-03-2018 CHH28_RS07065 9531ba975399822566842211907524f5 159 Pfam PF12680 SnoaL-like domain 29 130 4.7E-10 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CHH28_RS07065 9531ba975399822566842211907524f5 159 Gene3D G3DSA:3.10.450.50 15 143 1.1E-18 T 29-03-2018 CHH28_RS07065 9531ba975399822566842211907524f5 159 SUPERFAMILY SSF54427 21 143 6.44E-21 T 29-03-2018 IPR032710 NTF2-like domain CHH28_RS04355 a78f52ac9c25e7db947795f1e5f4b869 182 Gene3D G3DSA:1.10.357.10 52 179 3.1E-14 T 29-03-2018 CHH28_RS04355 a78f52ac9c25e7db947795f1e5f4b869 182 Gene3D G3DSA:1.10.10.60 2 51 4.3E-9 T 29-03-2018 CHH28_RS04355 a78f52ac9c25e7db947795f1e5f4b869 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 54 6.5E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CHH28_RS04355 a78f52ac9c25e7db947795f1e5f4b869 182 SUPERFAMILY SSF48498 75 176 2.09E-11 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CHH28_RS04355 a78f52ac9c25e7db947795f1e5f4b869 182 SUPERFAMILY SSF46689 3 80 1.44E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS08370 d0cb8d3b08971c9607c04698802d0127 185 SUPERFAMILY SSF47413 3 71 1.45E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CHH28_RS08370 d0cb8d3b08971c9607c04698802d0127 185 Pfam PF07883 Cupin domain 113 180 7.6E-12 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CHH28_RS08370 d0cb8d3b08971c9607c04698802d0127 185 SMART SM00530 11 66 4.0E-15 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CHH28_RS08370 d0cb8d3b08971c9607c04698802d0127 185 Gene3D G3DSA:2.60.120.10 71 183 8.7E-18 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS08370 d0cb8d3b08971c9607c04698802d0127 185 SUPERFAMILY SSF51182 52 185 4.58E-27 T 29-03-2018 IPR011051 RmlC-like cupin domain CHH28_RS08370 d0cb8d3b08971c9607c04698802d0127 185 Gene3D G3DSA:1.10.3100.10 1 70 2.3E-16 T 29-03-2018 IPR027910 YdiL-like domain CHH28_RS08370 d0cb8d3b08971c9607c04698802d0127 185 Pfam PF01381 Helix-turn-helix 12 64 2.1E-15 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CHH28_RS10590 496eccd159c4abf688a91b31324763eb 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 5.9E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS19560 3ef5a8dbf4507d3504081ece3eabebb6 617 Gene3D G3DSA:3.90.1310.10 32 250 1.8E-55 T 29-03-2018 CHH28_RS19560 3ef5a8dbf4507d3504081ece3eabebb6 617 SUPERFAMILY SSF56601 255 613 4.36E-91 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS19560 3ef5a8dbf4507d3504081ece3eabebb6 617 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 613 2.4E-223 T 29-03-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0016020 CHH28_RS19560 3ef5a8dbf4507d3504081ece3eabebb6 617 SUPERFAMILY SSF56519 55 253 2.49E-50 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CHH28_RS19560 3ef5a8dbf4507d3504081ece3eabebb6 617 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 240 1.9E-42 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CHH28_RS19560 3ef5a8dbf4507d3504081ece3eabebb6 617 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 608 1.6E-60 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CHH28_RS19560 3ef5a8dbf4507d3504081ece3eabebb6 617 Gene3D G3DSA:3.40.710.10 251 617 5.3E-84 T 29-03-2018 CHH28_RS10220 06a515ba578fa46960ea13e71867dabd 177 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 3 165 4.5E-54 T 29-03-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CHH28_RS10220 06a515ba578fa46960ea13e71867dabd 177 Pfam PF03641 Possible lysine decarboxylase 46 160 1.2E-35 T 29-03-2018 IPR031100 LOG family CHH28_RS10220 06a515ba578fa46960ea13e71867dabd 177 Gene3D G3DSA:3.40.50.450 1 175 1.5E-53 T 29-03-2018 CHH28_RS10220 06a515ba578fa46960ea13e71867dabd 177 SUPERFAMILY SSF102405 2 174 1.1E-54 T 29-03-2018 CHH28_RS06615 095980f968a66cb526c9c47e3d1dc1ad 160 SUPERFAMILY SSF54534 2 140 4.12E-28 T 29-03-2018 CHH28_RS06615 095980f968a66cb526c9c47e3d1dc1ad 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 3.2E-9 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CHH28_RS06615 095980f968a66cb526c9c47e3d1dc1ad 160 Gene3D G3DSA:3.10.50.40 1 160 2.4E-24 T 29-03-2018 CHH28_RS01675 213a6c90bd8fcfd7abb55ab9dc40b3ac 696 PRINTS PR00811 Bacterial general secretion pathway protein D signature 531 555 4.4E-18 T 29-03-2018 IPR001775 GspD/PilQ family CHH28_RS01675 213a6c90bd8fcfd7abb55ab9dc40b3ac 696 PRINTS PR00811 Bacterial general secretion pathway protein D signature 433 443 4.4E-18 T 29-03-2018 IPR001775 GspD/PilQ family CHH28_RS01675 213a6c90bd8fcfd7abb55ab9dc40b3ac 696 PRINTS PR00811 Bacterial general secretion pathway protein D signature 677 691 4.4E-18 T 29-03-2018 IPR001775 GspD/PilQ family CHH28_RS01675 213a6c90bd8fcfd7abb55ab9dc40b3ac 696 PRINTS PR00811 Bacterial general secretion pathway protein D signature 654 672 4.4E-18 T 29-03-2018 IPR001775 GspD/PilQ family CHH28_RS01675 213a6c90bd8fcfd7abb55ab9dc40b3ac 696 Pfam PF03958 Bacterial type II/III secretion system short domain 371 433 8.3E-13 T 29-03-2018 IPR005644 NolW-like CHH28_RS01675 213a6c90bd8fcfd7abb55ab9dc40b3ac 696 Pfam PF11741 AMIN domain 39 123 7.5E-9 T 29-03-2018 IPR021731 AMIN domain CHH28_RS01675 213a6c90bd8fcfd7abb55ab9dc40b3ac 696 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 271 690 1.8E-153 T 29-03-2018 IPR013355 Type IV pilus secretin PilQ CHH28_RS01675 213a6c90bd8fcfd7abb55ab9dc40b3ac 696 SMART SM00965 296 344 4.8E-9 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CHH28_RS01675 213a6c90bd8fcfd7abb55ab9dc40b3ac 696 Pfam PF00263 Bacterial type II and III secretion system protein 535 690 9.2E-48 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 CHH28_RS01675 213a6c90bd8fcfd7abb55ab9dc40b3ac 696 Pfam PF07660 Secretin and TonB N terminus short domain 297 343 1.8E-8 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CHH28_RS03880 3e9ddca8d25f3da11c6a21149228c26a 114 Pfam PF10805 Protein of unknown function (DUF2730) 10 106 1.1E-6 T 29-03-2018 IPR020269 Bacteriophage Mu, Gp25 CHH28_RS03880 3e9ddca8d25f3da11c6a21149228c26a 114 Gene3D G3DSA:1.20.5.50 25 113 1.6E-5 T 29-03-2018 CHH28_RS07125 4ae43fa1347ec8cc9b89781369d263da 204 PIRSF PIRSF006324 1 204 2.4E-49 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS07125 4ae43fa1347ec8cc9b89781369d263da 204 Pfam PF01810 LysE type translocator 15 202 1.6E-24 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS05825 16f920df9a4bdf9c468995a7fcfe9650 147 SUPERFAMILY SSF75169 40 145 3.49E-9 T 29-03-2018 IPR027396 DsrEFH-like CHH28_RS05825 16f920df9a4bdf9c468995a7fcfe9650 147 Pfam PF02635 DsrE/DsrF-like family 59 145 8.3E-6 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CHH28_RS05825 16f920df9a4bdf9c468995a7fcfe9650 147 Gene3D G3DSA:3.40.1260.10 29 147 4.2E-12 T 29-03-2018 CHH28_RS13095 11691fdea9f16f25087ffe136953784b 451 Gene3D G3DSA:2.40.50.100 261 420 1.4E-4 T 29-03-2018 CHH28_RS13095 11691fdea9f16f25087ffe136953784b 451 Gene3D G3DSA:1.10.287.470 202 244 8.8E-5 T 29-03-2018 CHH28_RS13095 11691fdea9f16f25087ffe136953784b 451 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 147 438 3.2E-36 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CHH28_RS13095 11691fdea9f16f25087ffe136953784b 451 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 144 365 1.8E-34 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CHH28_RS13095 11691fdea9f16f25087ffe136953784b 451 SUPERFAMILY SSF111369 155 369 6.02E-20 T 29-03-2018 CHH28_RS13095 11691fdea9f16f25087ffe136953784b 451 Gene3D G3DSA:3.90.1170.30 75 201 1.1E-4 T 29-03-2018 CHH28_RS03960 3ad3296a4b0e4285d2f1deaf4dc4c782 142 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 2.2E-28 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03960 3ad3296a4b0e4285d2f1deaf4dc4c782 142 SUPERFAMILY SSF46604 88 136 2.04E-13 T 29-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03960 3ad3296a4b0e4285d2f1deaf4dc4c782 142 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 132 4.2E-41 T 29-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03960 3ad3296a4b0e4285d2f1deaf4dc4c782 142 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 19.817 T 29-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03960 3ad3296a4b0e4285d2f1deaf4dc4c782 142 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 86 7.0E-26 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03960 3ad3296a4b0e4285d2f1deaf4dc4c782 142 Gene3D G3DSA:1.20.5.440 91 131 4.3E-9 T 29-03-2018 CHH28_RS03960 3ad3296a4b0e4285d2f1deaf4dc4c782 142 Gene3D G3DSA:2.60.15.10 1 90 9.0E-27 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03960 3ad3296a4b0e4285d2f1deaf4dc4c782 142 SUPERFAMILY SSF51344 3 86 1.96E-23 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS03960 3ad3296a4b0e4285d2f1deaf4dc4c782 142 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 133 1.6E-8 T 29-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CHH28_RS09090 e47d9846c86a17a2c98ee8286a40f3d9 396 Gene3D G3DSA:1.20.1250.20 5 197 2.9E-34 T 29-03-2018 CHH28_RS09090 e47d9846c86a17a2c98ee8286a40f3d9 396 SUPERFAMILY SSF103473 8 391 1.24E-59 T 29-03-2018 IPR020846 Major facilitator superfamily domain CHH28_RS09090 e47d9846c86a17a2c98ee8286a40f3d9 396 Pfam PF07690 Major Facilitator Superfamily 16 346 6.9E-45 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CHH28_RS09090 e47d9846c86a17a2c98ee8286a40f3d9 396 Gene3D G3DSA:1.20.1250.20 208 396 9.5E-16 T 29-03-2018 CHH28_RS18055 4aef93027640b6f01863be1aad6684c4 415 SUPERFAMILY SSF56219 154 413 7.85E-51 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS18055 4aef93027640b6f01863be1aad6684c4 415 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 160 400 2.2E-9 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS18055 4aef93027640b6f01863be1aad6684c4 415 Gene3D G3DSA:3.60.10.10 142 411 5.5E-29 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS12795 0b2938538a3674b2c7df3affe336163d 505 Gene3D G3DSA:3.20.20.70 286 494 7.5E-35 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS12795 0b2938538a3674b2c7df3affe336163d 505 Pfam PF02581 Thiamine monophosphate synthase 308 476 6.6E-46 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CHH28_RS12795 0b2938538a3674b2c7df3affe336163d 505 SUPERFAMILY SSF51391 289 494 3.14E-52 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CHH28_RS12795 0b2938538a3674b2c7df3affe336163d 505 Gene3D G3DSA:3.40.1190.20 2 285 1.3E-36 T 29-03-2018 IPR029056 Ribokinase-like CHH28_RS12795 0b2938538a3674b2c7df3affe336163d 505 SUPERFAMILY SSF53613 4 269 2.65E-40 T 29-03-2018 IPR029056 Ribokinase-like CHH28_RS12795 0b2938538a3674b2c7df3affe336163d 505 Pfam PF08543 Phosphomethylpyrimidine kinase 14 252 5.4E-36 T 29-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CHH28_RS05535 4fa1d848e1cdb2e9b517d7c9ad4e364f 209 Pfam PF01584 CheW-like domain 68 201 6.5E-12 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS05535 4fa1d848e1cdb2e9b517d7c9ad4e364f 209 SMART SM00260 63 202 0.0011 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS05535 4fa1d848e1cdb2e9b517d7c9ad4e364f 209 Gene3D G3DSA:2.40.50.180 86 180 4.6E-7 T 29-03-2018 CHH28_RS05535 4fa1d848e1cdb2e9b517d7c9ad4e364f 209 SUPERFAMILY SSF50341 64 202 2.49E-12 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS18835 4ae652d483914b33074e397b31571676 560 Pfam PF08345 Flagellar M-ring protein C-terminal 271 438 2.2E-47 T 29-03-2018 IPR013556 Flagellar M-ring C-terminal CHH28_RS18835 4ae652d483914b33074e397b31571676 560 Pfam PF01514 Secretory protein of YscJ/FliF family 48 238 1.0E-65 T 29-03-2018 IPR006182 Secretory protein YscJ/FliF CHH28_RS18835 4ae652d483914b33074e397b31571676 560 PRINTS PR01009 Flagellar M-ring protein signature 284 302 1.6E-36 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CHH28_RS18835 4ae652d483914b33074e397b31571676 560 PRINTS PR01009 Flagellar M-ring protein signature 362 386 1.6E-36 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CHH28_RS18835 4ae652d483914b33074e397b31571676 560 PRINTS PR01009 Flagellar M-ring protein signature 171 185 1.6E-36 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CHH28_RS18835 4ae652d483914b33074e397b31571676 560 PRINTS PR01009 Flagellar M-ring protein signature 214 232 1.6E-36 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CHH28_RS18835 4ae652d483914b33074e397b31571676 560 PRINTS PR01009 Flagellar M-ring protein signature 139 157 1.6E-36 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CHH28_RS18835 4ae652d483914b33074e397b31571676 560 PIRSF PIRSF004862 20 559 1.4E-135 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CHH28_RS18835 4ae652d483914b33074e397b31571676 560 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 33 557 1.1E-95 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CHH28_RS18835 4ae652d483914b33074e397b31571676 560 Gene3D G3DSA:3.30.70.1530 69 132 3.2E-7 T 29-03-2018 CHH28_RS12320 b1217d2d9ae06105b1ac92817aecc1d7 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 265 7.5E-26 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS12320 b1217d2d9ae06105b1ac92817aecc1d7 276 SUPERFAMILY SSF161098 85 269 2.88E-38 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS12320 b1217d2d9ae06105b1ac92817aecc1d7 276 Gene3D G3DSA:1.10.3720.10 3 270 1.9E-30 T 29-03-2018 CHH28_RS12320 b1217d2d9ae06105b1ac92817aecc1d7 276 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 3 269 1.1E-122 T 29-03-2018 IPR017784 ABC transporter, choline, permease protein CHH28_RS15725 a0e76552ddb7ff8c8142287db6c0d008 348 Pfam PF00535 Glycosyl transferase family 2 10 173 1.3E-30 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CHH28_RS15725 a0e76552ddb7ff8c8142287db6c0d008 348 Gene3D G3DSA:3.90.550.10 1 200 9.2E-37 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS15725 a0e76552ddb7ff8c8142287db6c0d008 348 SUPERFAMILY SSF53448 5 267 3.02E-48 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS06840 9dd087fd2765d53a13d3a8058000b4aa 241 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 4 240 1.8E-69 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CHH28_RS06840 9dd087fd2765d53a13d3a8058000b4aa 241 PIRSF PIRSF015601 2 240 3.2E-62 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CHH28_RS06840 9dd087fd2765d53a13d3a8058000b4aa 241 SUPERFAMILY SSF75217 76 241 1.44E-52 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CHH28_RS06840 9dd087fd2765d53a13d3a8058000b4aa 241 Pfam PF04452 RNA methyltransferase 19 236 3.6E-71 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CHH28_RS06840 9dd087fd2765d53a13d3a8058000b4aa 241 SUPERFAMILY SSF88697 3 67 1.44E-15 T 29-03-2018 IPR015947 PUA-like domain CHH28_RS06840 9dd087fd2765d53a13d3a8058000b4aa 241 Gene3D G3DSA:3.40.1280.10 1 241 1.2E-78 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CHH28_RS17025 24edfc7ee56e7ec66f31b2bdfa8fb8dd 150 SUPERFAMILY SSF54975 3 137 3.04E-35 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CHH28_RS17025 24edfc7ee56e7ec66f31b2bdfa8fb8dd 150 Pfam PF04940 Sensors of blue-light using FAD 3 95 5.5E-31 T 29-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 CHH28_RS17025 24edfc7ee56e7ec66f31b2bdfa8fb8dd 150 SMART SM01034 3 96 2.0E-36 T 29-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 CHH28_RS07745 4e35adc4db749b26dbd29fa97349b93c 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 261 9.1E-14 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS07745 4e35adc4db749b26dbd29fa97349b93c 273 SUPERFAMILY SSF53850 43 262 1.02E-28 T 29-03-2018 CHH28_RS07745 4e35adc4db749b26dbd29fa97349b93c 273 Gene3D G3DSA:3.40.190.10 31 265 4.1E-13 T 29-03-2018 CHH28_RS03650 11be77516ea716695b97a222e06c9c9d 244 Gene3D G3DSA:3.40.50.150 36 244 2.3E-31 T 29-03-2018 CHH28_RS03650 11be77516ea716695b97a222e06c9c9d 244 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 30 243 29.308 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CHH28_RS03650 11be77516ea716695b97a222e06c9c9d 244 SUPERFAMILY SSF53335 20 242 8.28E-41 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS03650 11be77516ea716695b97a222e06c9c9d 244 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 63 243 1.2E-55 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CHH28_RS03650 11be77516ea716695b97a222e06c9c9d 244 Pfam PF02390 Putative methyltransferase 71 238 1.9E-53 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CHH28_RS17305 b8ad93834ee5f83825191ee4a48bbba6 110 SMART SM00418 5 83 9.6E-22 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CHH28_RS17305 b8ad93834ee5f83825191ee4a48bbba6 110 SUPERFAMILY SSF46785 6 84 6.07E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17305 b8ad93834ee5f83825191ee4a48bbba6 110 Gene3D G3DSA:1.10.10.10 5 107 1.9E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17305 b8ad93834ee5f83825191ee4a48bbba6 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 2.3E-19 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CHH28_RS17305 b8ad93834ee5f83825191ee4a48bbba6 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 2.3E-19 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CHH28_RS17305 b8ad93834ee5f83825191ee4a48bbba6 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 2.3E-19 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CHH28_RS17305 b8ad93834ee5f83825191ee4a48bbba6 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 2.3E-19 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CHH28_RS17305 b8ad93834ee5f83825191ee4a48bbba6 110 Pfam PF01022 Bacterial regulatory protein, arsR family 12 58 5.7E-11 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CHH28_RS12700 a816a360f13e1bbb099e8c3d6a346795 607 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 4 599 4.2E-273 T 29-03-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 CHH28_RS12700 a816a360f13e1bbb099e8c3d6a346795 607 SUPERFAMILY SSF143975 1 419 8.5E-134 T 29-03-2018 CHH28_RS12700 a816a360f13e1bbb099e8c3d6a346795 607 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CHH28_RS12700 a816a360f13e1bbb099e8c3d6a346795 607 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 506 517 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CHH28_RS12700 a816a360f13e1bbb099e8c3d6a346795 607 Pfam PF00920 Dehydratase family 68 596 2.4E-151 T 29-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CHH28_RS12700 a816a360f13e1bbb099e8c3d6a346795 607 SUPERFAMILY SSF52016 420 598 1.57E-53 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CHH28_RS15385 dd5f5972138834047e818583ac9962b6 449 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 12 353 3.0E-130 T 29-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CHH28_RS15385 dd5f5972138834047e818583ac9962b6 449 Pfam PF13742 OB-fold nucleic acid binding domain 11 103 1.2E-30 T 29-03-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CHH28_RS15385 dd5f5972138834047e818583ac9962b6 449 Gene3D G3DSA:2.40.50.140 6 116 4.6E-9 T 29-03-2018 CHH28_RS15385 dd5f5972138834047e818583ac9962b6 449 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 8 441 28.663 T 29-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CHH28_RS15385 dd5f5972138834047e818583ac9962b6 449 Gene3D G3DSA:1.20.120.330 240 393 9.0E-4 T 29-03-2018 CHH28_RS15385 dd5f5972138834047e818583ac9962b6 449 Gene3D G3DSA:3.40.50.1970 117 239 2.6E-4 T 29-03-2018 CHH28_RS15385 dd5f5972138834047e818583ac9962b6 449 Pfam PF02601 Exonuclease VII, large subunit 127 438 5.1E-98 T 29-03-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CHH28_RS05070 7296858d7045fbbfd8520e5209569f97 432 Pfam PF13433 Periplasmic binding protein domain 31 399 8.0E-171 T 29-03-2018 CHH28_RS05070 7296858d7045fbbfd8520e5209569f97 432 Gene3D G3DSA:3.40.50.2300 26 161 1.8E-21 T 29-03-2018 CHH28_RS05070 7296858d7045fbbfd8520e5209569f97 432 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 395 2.2E-172 T 29-03-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like CHH28_RS05070 7296858d7045fbbfd8520e5209569f97 432 SUPERFAMILY SSF53822 30 403 4.28E-89 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CHH28_RS05070 7296858d7045fbbfd8520e5209569f97 432 Gene3D G3DSA:3.40.50.2300 162 347 5.2E-26 T 29-03-2018 CHH28_RS19710 4da0c0d9e3b6b68c5a72b8b3c9e263db 574 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 405 563 2.6E-44 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS19710 4da0c0d9e3b6b68c5a72b8b3c9e263db 574 Pfam PF00990 Diguanylate cyclase, GGDEF domain 409 560 4.5E-42 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS19710 4da0c0d9e3b6b68c5a72b8b3c9e263db 574 SMART SM00267 397 565 8.3E-55 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS19710 4da0c0d9e3b6b68c5a72b8b3c9e263db 574 SUPERFAMILY SSF55073 413 563 1.57E-43 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS19710 4da0c0d9e3b6b68c5a72b8b3c9e263db 574 Gene3D G3DSA:3.30.70.270 401 572 1.9E-49 T 29-03-2018 CHH28_RS17705 68657332932a1c4ffb793f846716ddbe 266 Pfam PF02616 Segregation and condensation protein ScpA 42 252 1.8E-32 T 29-03-2018 IPR003768 Segregation and condensation protein A CHH28_RS17705 68657332932a1c4ffb793f846716ddbe 266 Gene3D G3DSA:1.10.10.580 186 253 3.1E-16 T 29-03-2018 CHH28_RS17705 68657332932a1c4ffb793f846716ddbe 266 Hamap MF_01805 Segregation and condensation protein A [scpA]. 25 255 22.063 T 29-03-2018 IPR003768 Segregation and condensation protein A CHH28_RS15900 532e94894d508da1719202968e296a29 209 Pfam PF13649 Methyltransferase domain 66 153 1.9E-6 T 29-03-2018 CHH28_RS15900 532e94894d508da1719202968e296a29 209 SUPERFAMILY SSF53335 54 170 1.58E-15 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS15900 532e94894d508da1719202968e296a29 209 Gene3D G3DSA:3.40.50.150 19 201 2.9E-17 T 29-03-2018 CHH28_RS06755 0f60dc4afc840f2e0ae3e8980a182b30 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.4E-12 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS06755 0f60dc4afc840f2e0ae3e8980a182b30 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.4E-12 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS06755 0f60dc4afc840f2e0ae3e8980a182b30 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.4E-12 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS06755 0f60dc4afc840f2e0ae3e8980a182b30 139 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS06755 0f60dc4afc840f2e0ae3e8980a182b30 139 SUPERFAMILY SSF46955 1 126 9.16E-38 T 29-03-2018 IPR009061 Putative DNA-binding domain CHH28_RS06755 0f60dc4afc840f2e0ae3e8980a182b30 139 Gene3D G3DSA:1.10.1660.10 56 132 6.2E-21 T 29-03-2018 CHH28_RS06755 0f60dc4afc840f2e0ae3e8980a182b30 139 Pfam PF09278 MerR, DNA binding 45 108 1.9E-18 T 29-03-2018 IPR015358 Transcription regulator MerR, DNA binding CHH28_RS06755 0f60dc4afc840f2e0ae3e8980a182b30 139 Pfam PF00376 MerR family regulatory protein 2 39 1.7E-14 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS06755 0f60dc4afc840f2e0ae3e8980a182b30 139 Gene3D G3DSA:1.10.1660.10 1 55 3.2E-22 T 29-03-2018 CHH28_RS06755 0f60dc4afc840f2e0ae3e8980a182b30 139 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 1.0E-52 T 29-03-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 CHH28_RS06755 0f60dc4afc840f2e0ae3e8980a182b30 139 SMART SM00422 1 70 3.4E-32 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS01230 45700ac8bf5b087a4091fd0f84857d13 503 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 285 2.7E-63 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CHH28_RS01230 45700ac8bf5b087a4091fd0f84857d13 503 Gene3D G3DSA:3.20.130.10 314 487 2.9E-66 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CHH28_RS01230 45700ac8bf5b087a4091fd0f84857d13 503 Pfam PF05681 Fumarate hydratase (Fumerase) 11 284 3.4E-100 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CHH28_RS01230 45700ac8bf5b087a4091fd0f84857d13 503 SUPERFAMILY SSF117457 315 486 3.53E-63 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CHH28_RS01230 45700ac8bf5b087a4091fd0f84857d13 503 Pfam PF05683 Fumarase C-terminus 288 488 9.6E-80 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CHH28_RS01230 45700ac8bf5b087a4091fd0f84857d13 503 PIRSF PIRSF001394 1 502 4.2E-218 T 29-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 CHH28_RS01230 45700ac8bf5b087a4091fd0f84857d13 503 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 1.2E-48 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CHH28_RS00420 266ef9319a68c4a01ff13903443d4c2e 342 Gene3D G3DSA:3.40.50.1820 17 272 4.9E-6 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS00420 266ef9319a68c4a01ff13903443d4c2e 342 SUPERFAMILY SSF53474 18 233 1.64E-6 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS01635 f30f7d42f46cd101d3707645d562cda8 932 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 150 171 4.8E-41 T 29-03-2018 CHH28_RS01635 f30f7d42f46cd101d3707645d562cda8 932 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 4.8E-41 T 29-03-2018 CHH28_RS01635 f30f7d42f46cd101d3707645d562cda8 932 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 4.8E-41 T 29-03-2018 CHH28_RS01635 f30f7d42f46cd101d3707645d562cda8 932 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 4.8E-41 T 29-03-2018 CHH28_RS01635 f30f7d42f46cd101d3707645d562cda8 932 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 4.8E-41 T 29-03-2018 CHH28_RS01635 f30f7d42f46cd101d3707645d562cda8 932 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 4.8E-41 T 29-03-2018 CHH28_RS01635 f30f7d42f46cd101d3707645d562cda8 932 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 4.8E-41 T 29-03-2018 CHH28_RS01635 f30f7d42f46cd101d3707645d562cda8 932 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 790 911 6.2E-35 T 29-03-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CHH28_RS01635 f30f7d42f46cd101d3707645d562cda8 932 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 28 47 2.8E-6 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CHH28_RS01635 f30f7d42f46cd101d3707645d562cda8 932 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 351 373 2.8E-6 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CHH28_RS01635 f30f7d42f46cd101d3707645d562cda8 932 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 77 97 2.8E-6 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CHH28_RS01635 f30f7d42f46cd101d3707645d562cda8 932 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 256 278 2.8E-6 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CHH28_RS01635 f30f7d42f46cd101d3707645d562cda8 932 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 60 113 9.0E-11 T 29-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CHH28_RS01635 f30f7d42f46cd101d3707645d562cda8 932 Pfam PF00361 Proton-conducting membrane transporter 126 404 3.3E-66 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CHH28_RS01635 f30f7d42f46cd101d3707645d562cda8 932 Pfam PF13244 Domain of unknown function (DUF4040) 609 674 1.9E-19 T 29-03-2018 IPR025383 Domain of unknown function DUF4040 CHH28_RS05360 7235e6e0db1cdbdbf05f7cbf13d1a39f 371 SUPERFAMILY SSF52540 3 336 4.13E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS05360 7235e6e0db1cdbdbf05f7cbf13d1a39f 371 Gene3D G3DSA:3.40.50.300 274 347 2.4E-13 T 29-03-2018 CHH28_RS05360 7235e6e0db1cdbdbf05f7cbf13d1a39f 371 Gene3D G3DSA:3.40.50.300 113 273 4.2E-22 T 29-03-2018 CHH28_RS05360 7235e6e0db1cdbdbf05f7cbf13d1a39f 371 Pfam PF00437 Type II/IV secretion system protein 118 244 3.4E-34 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CHH28_RS05360 7235e6e0db1cdbdbf05f7cbf13d1a39f 371 Gene3D G3DSA:3.30.450.90 1 99 2.7E-18 T 29-03-2018 CHH28_RS05360 7235e6e0db1cdbdbf05f7cbf13d1a39f 371 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 344 4.7E-133 T 29-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 CHH28_RS05160 cb9a5376cc6bf18b53457199ee6f32e9 315 Gene3D G3DSA:3.40.30.10 38 187 3.1E-33 T 29-03-2018 CHH28_RS05160 cb9a5376cc6bf18b53457199ee6f32e9 315 Pfam PF13410 Glutathione S-transferase, C-terminal domain 202 276 2.5E-15 T 29-03-2018 CHH28_RS05160 cb9a5376cc6bf18b53457199ee6f32e9 315 SUPERFAMILY SSF52833 41 159 4.56E-14 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS05160 cb9a5376cc6bf18b53457199ee6f32e9 315 PIRSF PIRSF015753 4 314 1.2E-119 T 29-03-2018 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 CHH28_RS05160 cb9a5376cc6bf18b53457199ee6f32e9 315 Gene3D G3DSA:1.20.1050.10 188 314 1.1E-32 T 29-03-2018 CHH28_RS05160 cb9a5376cc6bf18b53457199ee6f32e9 315 SUPERFAMILY SSF47616 165 298 4.87E-28 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CHH28_RS05160 cb9a5376cc6bf18b53457199ee6f32e9 315 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 157 8.2E-22 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CHH28_RS13890 1d82536b903c177559032eff4f33308e 146 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 1.2E-8 T 29-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CHH28_RS13890 1d82536b903c177559032eff4f33308e 146 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 146 40.403 T 29-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 CHH28_RS13890 1d82536b903c177559032eff4f33308e 146 PIRSF PIRSF006173 1 146 2.1E-64 T 29-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 CHH28_RS06520 23c4867de7cd84828aa366d1d6ba4a92 205 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 3 205 45.384 T 29-03-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 CHH28_RS06520 23c4867de7cd84828aa366d1d6ba4a92 205 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 203 1.3E-58 T 29-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 CHH28_RS06520 23c4867de7cd84828aa366d1d6ba4a92 205 SUPERFAMILY SSF52972 3 203 1.28E-65 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CHH28_RS06520 23c4867de7cd84828aa366d1d6ba4a92 205 Gene3D G3DSA:3.90.950.10 1 205 3.9E-73 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CHH28_RS06520 23c4867de7cd84828aa366d1d6ba4a92 205 Pfam PF01725 Ham1 family 5 201 5.2E-56 T 29-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 CHH28_RS14980 2bf9cf6f75d3c0d4c57945e746a2b001 317 Pfam PF13511 Domain of unknown function (DUF4124) 38 90 8.3E-7 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 CHH28_RS08825 bcc33dccd2c4b3c6b800c6639f1e801f 327 Gene3D G3DSA:1.25.40.10 40 288 3.9E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS12845 d163fbd4af7f84cac69c370a9790d474 312 Gene3D G3DSA:2.30.110.10 17 139 5.4E-4 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CHH28_RS12845 d163fbd4af7f84cac69c370a9790d474 312 Gene3D G3DSA:2.30.110.10 140 274 9.8E-6 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CHH28_RS19680 bbe17b8b8d1d41e3bd48b7dad0931c7e 373 Gene3D G3DSA:3.30.1490.100 238 342 3.4E-15 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CHH28_RS19680 bbe17b8b8d1d41e3bd48b7dad0931c7e 373 SUPERFAMILY SSF56672 1 228 1.78E-85 T 29-03-2018 CHH28_RS19680 bbe17b8b8d1d41e3bd48b7dad0931c7e 373 Gene3D G3DSA:1.10.150.20 166 237 7.1E-22 T 29-03-2018 CHH28_RS19680 bbe17b8b8d1d41e3bd48b7dad0931c7e 373 Pfam PF11799 impB/mucB/samB family C-terminal domain 231 328 2.2E-5 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CHH28_RS19680 bbe17b8b8d1d41e3bd48b7dad0931c7e 373 Pfam PF11798 IMS family HHH motif 164 192 2.7E-6 T 29-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CHH28_RS19680 bbe17b8b8d1d41e3bd48b7dad0931c7e 373 Gene3D G3DSA:3.30.70.270 111 165 1.0E-19 T 29-03-2018 CHH28_RS19680 bbe17b8b8d1d41e3bd48b7dad0931c7e 373 Gene3D G3DSA:3.30.70.270 40 110 3.9E-23 T 29-03-2018 CHH28_RS19680 bbe17b8b8d1d41e3bd48b7dad0931c7e 373 Hamap MF_01113 DNA polymerase IV [dinB]. 1 341 34.272 T 29-03-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CHH28_RS19680 bbe17b8b8d1d41e3bd48b7dad0931c7e 373 SUPERFAMILY SSF100879 236 340 6.87E-16 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CHH28_RS19680 bbe17b8b8d1d41e3bd48b7dad0931c7e 373 Pfam PF00817 impB/mucB/samB family 7 149 1.0E-47 T 29-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CHH28_RS00510 0356a1325daaacebaecf2e60891e6915 372 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 150 216 2.0E-13 T 29-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CHH28_RS00510 0356a1325daaacebaecf2e60891e6915 372 Gene3D G3DSA:3.40.47.10 206 372 7.9E-19 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS00510 0356a1325daaacebaecf2e60891e6915 372 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 281 370 1.3E-20 T 29-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CHH28_RS00510 0356a1325daaacebaecf2e60891e6915 372 Gene3D G3DSA:3.40.47.10 1 205 1.6E-30 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS00510 0356a1325daaacebaecf2e60891e6915 372 SUPERFAMILY SSF53901 2 370 2.89E-42 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS08575 326857a957904fa02bec9b4a2c038e76 159 Pfam PF04093 rod shape-determining protein MreD 7 149 4.4E-11 T 29-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CHH28_RS08575 326857a957904fa02bec9b4a2c038e76 159 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 6 148 1.1E-20 T 29-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CHH28_RS03680 1a8b2146bd60e2acfd5701ced7a75cd6 635 Gene3D G3DSA:3.30.70.270 208 374 1.7E-20 T 29-03-2018 CHH28_RS03680 1a8b2146bd60e2acfd5701ced7a75cd6 635 SUPERFAMILY SSF141868 391 628 1.31E-67 T 29-03-2018 IPR001633 EAL domain CHH28_RS03680 1a8b2146bd60e2acfd5701ced7a75cd6 635 Pfam PF00990 Diguanylate cyclase, GGDEF domain 215 368 1.7E-12 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS03680 1a8b2146bd60e2acfd5701ced7a75cd6 635 SMART SM00052 385 627 2.2E-67 T 29-03-2018 IPR001633 EAL domain CHH28_RS03680 1a8b2146bd60e2acfd5701ced7a75cd6 635 SMART SM00267 204 374 1.7E-6 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS03680 1a8b2146bd60e2acfd5701ced7a75cd6 635 Gene3D G3DSA:3.20.20.450 375 627 2.2E-72 T 29-03-2018 IPR001633 EAL domain CHH28_RS03680 1a8b2146bd60e2acfd5701ced7a75cd6 635 SUPERFAMILY SSF55073 220 372 9.42E-15 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS03680 1a8b2146bd60e2acfd5701ced7a75cd6 635 Pfam PF00563 EAL domain 392 622 2.0E-64 T 29-03-2018 IPR001633 EAL domain CHH28_RS16830 bb96e2d23d82e8953bfa9e5d6dd02258 173 ProSitePatterns PS00194 Thioredoxin family active site. 66 84 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CHH28_RS16830 bb96e2d23d82e8953bfa9e5d6dd02258 173 Gene3D G3DSA:3.40.30.10 24 171 3.8E-31 T 29-03-2018 CHH28_RS16830 bb96e2d23d82e8953bfa9e5d6dd02258 173 SUPERFAMILY SSF52833 42 164 6.35E-36 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS16830 bb96e2d23d82e8953bfa9e5d6dd02258 173 Pfam PF08534 Redoxin 37 158 2.2E-21 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CHH28_RS16830 bb96e2d23d82e8953bfa9e5d6dd02258 173 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 5 170 7.6E-55 T 29-03-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 CHH28_RS16100 672527cbe5e4f9ac97ac5c43ee3b4779 264 Gene3D G3DSA:1.20.58.60 14 111 0.013 T 29-03-2018 CHH28_RS01715 1ec921acf9c40d9e80ada71410ae1f0f 254 Pfam PF00977 Histidine biosynthesis protein 6 236 1.6E-91 T 29-03-2018 IPR006062 Histidine biosynthesis GO:0000105 CHH28_RS01715 1ec921acf9c40d9e80ada71410ae1f0f 254 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 252 48.426 T 29-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CHH28_RS01715 1ec921acf9c40d9e80ada71410ae1f0f 254 SUPERFAMILY SSF51366 3 252 2.43E-84 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CHH28_RS01715 1ec921acf9c40d9e80ada71410ae1f0f 254 Gene3D G3DSA:3.20.20.70 5 248 2.1E-68 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS01715 1ec921acf9c40d9e80ada71410ae1f0f 254 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 2 252 3.8E-111 T 29-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CHH28_RS01530 19ba86acf7f80eb20933506526f693ff 974 SUPERFAMILY SSF103190 165 230 1.88E-6 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CHH28_RS01530 19ba86acf7f80eb20933506526f693ff 974 SUPERFAMILY SSF53850 278 505 5.69E-35 T 29-03-2018 CHH28_RS01530 19ba86acf7f80eb20933506526f693ff 974 SUPERFAMILY SSF109604 655 745 1.43E-6 T 29-03-2018 CHH28_RS01530 19ba86acf7f80eb20933506526f693ff 974 Gene3D G3DSA:1.10.3210.10 621 835 3.7E-26 T 29-03-2018 CHH28_RS01530 19ba86acf7f80eb20933506526f693ff 974 Gene3D G3DSA:3.40.190.10 268 383 3.6E-15 T 29-03-2018 CHH28_RS01530 19ba86acf7f80eb20933506526f693ff 974 Pfam PF02743 Cache domain 43 259 4.0E-14 T 29-03-2018 IPR033479 Double Cache domain 1 CHH28_RS01530 19ba86acf7f80eb20933506526f693ff 974 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 285 503 7.8E-27 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS01530 19ba86acf7f80eb20933506526f693ff 974 Pfam PF13487 HD domain 901 928 8.4E-6 T 29-03-2018 CHH28_RS01530 19ba86acf7f80eb20933506526f693ff 974 Gene3D G3DSA:3.30.450.20 84 232 1.0E-18 T 29-03-2018 CHH28_RS01530 19ba86acf7f80eb20933506526f693ff 974 SMART SM00062 284 504 2.8E-16 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS01530 19ba86acf7f80eb20933506526f693ff 974 Gene3D G3DSA:3.40.190.10 384 460 1.2E-7 T 29-03-2018 CHH28_RS01835 28c94cd355b8b89ff9676864030bc639 701 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 167 4.4E-18 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS01835 28c94cd355b8b89ff9676864030bc639 701 Gene3D G3DSA:2.170.130.10 41 172 1.3E-21 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS01835 28c94cd355b8b89ff9676864030bc639 701 SUPERFAMILY SSF56935 45 698 1.04E-77 T 29-03-2018 CHH28_RS01835 28c94cd355b8b89ff9676864030bc639 701 Gene3D G3DSA:2.40.170.20 173 699 2.7E-39 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS01835 28c94cd355b8b89ff9676864030bc639 701 Pfam PF00593 TonB dependent receptor 191 698 3.4E-33 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS03950 4fb8851dd4e5462b6150b76cf649d420 575 Gene3D G3DSA:1.10.3810.10 40 238 3.6E-54 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CHH28_RS03950 4fb8851dd4e5462b6150b76cf649d420 575 SUPERFAMILY SSF53955 36 256 4.78E-62 T 29-03-2018 IPR023346 Lysozyme-like domain CHH28_RS03950 4fb8851dd4e5462b6150b76cf649d420 575 SUPERFAMILY SSF56601 255 565 3.22E-85 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS03950 4fb8851dd4e5462b6150b76cf649d420 575 SUPERFAMILY SSF56601 206 228 3.22E-85 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS03950 4fb8851dd4e5462b6150b76cf649d420 575 Gene3D G3DSA:3.40.710.10 239 563 5.6E-72 T 29-03-2018 CHH28_RS03950 4fb8851dd4e5462b6150b76cf649d420 575 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 37 557 1.9E-183 T 29-03-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 CHH28_RS03950 4fb8851dd4e5462b6150b76cf649d420 575 Pfam PF00912 Transglycosylase 62 225 6.1E-48 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CHH28_RS03950 4fb8851dd4e5462b6150b76cf649d420 575 Pfam PF00905 Penicillin binding protein transpeptidase domain 303 536 2.3E-28 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CHH28_RS05675 ded824ca3b4c4952e6775d165c0d65c8 659 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 469 624 2.8E-41 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS05675 ded824ca3b4c4952e6775d165c0d65c8 659 Gene3D G3DSA:3.30.450.20 197 307 7.6E-21 T 29-03-2018 CHH28_RS05675 ded824ca3b4c4952e6775d165c0d65c8 659 Gene3D G3DSA:3.30.450.20 73 196 2.4E-20 T 29-03-2018 CHH28_RS05675 ded824ca3b4c4952e6775d165c0d65c8 659 SMART SM00283 397 658 2.2E-56 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS05675 ded824ca3b4c4952e6775d165c0d65c8 659 SMART SM00304 328 382 1.1E-13 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS05675 ded824ca3b4c4952e6775d165c0d65c8 659 SMART SM00304 571 634 54.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS05675 ded824ca3b4c4952e6775d165c0d65c8 659 Pfam PF00672 HAMP domain 329 378 1.2E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS05675 ded824ca3b4c4952e6775d165c0d65c8 659 Gene3D G3DSA:1.10.287.950 411 615 5.3E-51 T 29-03-2018 CHH28_RS05675 ded824ca3b4c4952e6775d165c0d65c8 659 Gene3D G3DSA:1.10.287.950 616 658 0.29 T 29-03-2018 CHH28_RS05675 ded824ca3b4c4952e6775d165c0d65c8 659 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 572 601 1.7E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS05675 ded824ca3b4c4952e6775d165c0d65c8 659 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 306 326 1.7E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS05675 ded824ca3b4c4952e6775d165c0d65c8 659 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 495 522 1.7E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS05675 ded824ca3b4c4952e6775d165c0d65c8 659 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 524 553 1.7E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS05675 ded824ca3b4c4952e6775d165c0d65c8 659 Pfam PF02743 Cache domain 134 290 2.3E-24 T 29-03-2018 IPR033479 Double Cache domain 1 CHH28_RS05675 ded824ca3b4c4952e6775d165c0d65c8 659 SUPERFAMILY SSF58104 350 659 1.57E-72 T 29-03-2018 CHH28_RS05675 ded824ca3b4c4952e6775d165c0d65c8 659 SUPERFAMILY SSF103190 130 216 8.63E-13 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CHH28_RS02395 0cf470a2036ef278028aa5dfcd814561 225 Gene3D G3DSA:1.10.10.10 123 225 5.6E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS02395 0cf470a2036ef278028aa5dfcd814561 225 SMART SM00448 1 112 2.0E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS02395 0cf470a2036ef278028aa5dfcd814561 225 Pfam PF00072 Response regulator receiver domain 3 112 7.0E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS02395 0cf470a2036ef278028aa5dfcd814561 225 Gene3D G3DSA:3.40.50.2300 1 122 1.2E-33 T 29-03-2018 CHH28_RS02395 0cf470a2036ef278028aa5dfcd814561 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 9.5E-27 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS02395 0cf470a2036ef278028aa5dfcd814561 225 SMART SM00862 146 221 2.2E-26 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS02395 0cf470a2036ef278028aa5dfcd814561 225 SUPERFAMILY SSF52172 1 177 6.92E-38 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS07515 0f29002af257d95bdae589143f7c2791 353 Gene3D G3DSA:3.40.50.1000 182 341 1.6E-11 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS07515 0f29002af257d95bdae589143f7c2791 353 Pfam PF08235 LNS2 (Lipin/Ned1/Smp2) 156 344 2.2E-10 T 29-03-2018 IPR013209 Lipin/Ned1/Smp2 (LNS2) KEGG: 00561+3.1.3.4|KEGG: 00564+3.1.3.4|KEGG: 00565+3.1.3.4|KEGG: 00600+3.1.3.4|MetaCyc: PWY-6453|MetaCyc: PWY-7782|Reactome: R-HSA-1483191|Reactome: R-HSA-1483213|Reactome: R-HSA-4419969|Reactome: R-HSA-75109 CHH28_RS07515 0f29002af257d95bdae589143f7c2791 353 SMART SM00775 187 328 1.5E-9 T 29-03-2018 IPR031315 LNS2/PITP CHH28_RS07515 0f29002af257d95bdae589143f7c2791 353 SUPERFAMILY SSF56784 184 313 2.47E-15 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS10185 802c669d5166dca6b7c85dc15ef1bfc0 117 SUPERFAMILY SSF50104 4 116 1.6E-45 T 29-03-2018 IPR008991 Translation protein SH3-like domain CHH28_RS10185 802c669d5166dca6b7c85dc15ef1bfc0 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 29-03-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS10185 802c669d5166dca6b7c85dc15ef1bfc0 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 6 116 7.2E-50 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS10185 802c669d5166dca6b7c85dc15ef1bfc0 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 5 117 30.85 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS10185 802c669d5166dca6b7c85dc15ef1bfc0 117 PIRSF PIRSF002191 1 117 7.3E-49 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS10185 802c669d5166dca6b7c85dc15ef1bfc0 117 PRINTS PR00061 Ribosomal protein L19 signature 7 36 3.7E-41 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS10185 802c669d5166dca6b7c85dc15ef1bfc0 117 PRINTS PR00061 Ribosomal protein L19 signature 91 116 3.7E-41 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS10185 802c669d5166dca6b7c85dc15ef1bfc0 117 PRINTS PR00061 Ribosomal protein L19 signature 37 66 3.7E-41 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS10185 802c669d5166dca6b7c85dc15ef1bfc0 117 Pfam PF01245 Ribosomal protein L19 7 116 2.1E-49 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS18965 414007b7e93270dfd3c998026eb0aeee 132 PIRSF PIRSF002889 1 132 5.5E-42 T 29-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CHH28_RS18965 414007b7e93270dfd3c998026eb0aeee 132 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 16 36 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CHH28_RS18965 414007b7e93270dfd3c998026eb0aeee 132 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 130 3.3E-35 T 29-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CHH28_RS18965 414007b7e93270dfd3c998026eb0aeee 132 Pfam PF00460 Flagella basal body rod protein 13 40 5.9E-7 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CHH28_RS15220 11479e75409944f48d659ac17d163f4d 204 Pfam PF06080 Protein of unknown function (DUF938) 12 203 1.3E-61 T 29-03-2018 IPR010342 Protein of unknown function DUF938 CHH28_RS15220 11479e75409944f48d659ac17d163f4d 204 SUPERFAMILY SSF53335 21 192 1.57E-19 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS15220 11479e75409944f48d659ac17d163f4d 204 Gene3D G3DSA:3.40.50.150 12 204 2.8E-13 T 29-03-2018 CHH28_RS04375 927505d8a421c04a714feb5c3d89b501 465 Pfam PF10396 GTP-binding protein TrmE N-terminus 10 122 1.8E-36 T 29-03-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 CHH28_RS04375 927505d8a421c04a714feb5c3d89b501 465 Gene3D G3DSA:3.30.1360.120 1 123 2.3E-42 T 29-03-2018 CHH28_RS04375 927505d8a421c04a714feb5c3d89b501 465 Pfam PF12631 MnmE helical domain 125 462 3.5E-59 T 29-03-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 CHH28_RS04375 927505d8a421c04a714feb5c3d89b501 465 SUPERFAMILY SSF116878 390 465 8.5E-50 T 29-03-2018 CHH28_RS04375 927505d8a421c04a714feb5c3d89b501 465 SUPERFAMILY SSF116878 123 222 8.5E-50 T 29-03-2018 CHH28_RS04375 927505d8a421c04a714feb5c3d89b501 465 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 14 465 8.6E-105 T 29-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CHH28_RS04375 927505d8a421c04a714feb5c3d89b501 465 Gene3D G3DSA:1.20.120.430 124 281 2.3E-28 T 29-03-2018 CHH28_RS04375 927505d8a421c04a714feb5c3d89b501 465 Gene3D G3DSA:1.20.120.430 282 465 1.2E-29 T 29-03-2018 CHH28_RS04375 927505d8a421c04a714feb5c3d89b501 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 218 313 1.0E-19 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CHH28_RS04375 927505d8a421c04a714feb5c3d89b501 465 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 8 465 33.289 T 29-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CHH28_RS04375 927505d8a421c04a714feb5c3d89b501 465 SUPERFAMILY SSF52540 206 383 2.39E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS04375 927505d8a421c04a714feb5c3d89b501 465 SUPERFAMILY SSF52540 75 172 2.39E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS04375 927505d8a421c04a714feb5c3d89b501 465 Pfam PF01926 50S ribosome-binding GTPase 220 315 7.7E-25 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS08250 cc6cc7998cc91abb400ccf493bd21268 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 4.5E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS08250 cc6cc7998cc91abb400ccf493bd21268 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 4.5E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS08250 cc6cc7998cc91abb400ccf493bd21268 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.5E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS08250 cc6cc7998cc91abb400ccf493bd21268 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.1E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS08250 cc6cc7998cc91abb400ccf493bd21268 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.1E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS08250 cc6cc7998cc91abb400ccf493bd21268 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.1E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS08250 cc6cc7998cc91abb400ccf493bd21268 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.1E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS08250 cc6cc7998cc91abb400ccf493bd21268 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.1E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS08250 cc6cc7998cc91abb400ccf493bd21268 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CHH28_RS08250 cc6cc7998cc91abb400ccf493bd21268 258 Pfam PF00106 short chain dehydrogenase 10 190 1.5E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS08250 cc6cc7998cc91abb400ccf493bd21268 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 188 7.9E-4 T 29-03-2018 CHH28_RS08250 cc6cc7998cc91abb400ccf493bd21268 258 SUPERFAMILY SSF51735 6 249 1.7E-59 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS08250 cc6cc7998cc91abb400ccf493bd21268 258 Gene3D G3DSA:3.40.50.720 5 159 3.5E-39 T 29-03-2018 CHH28_RS08250 cc6cc7998cc91abb400ccf493bd21268 258 Gene3D G3DSA:3.40.50.720 160 221 2.9E-10 T 29-03-2018 CHH28_RS11245 53471021a67947aaa355908acccd1fc0 78 Gene3D G3DSA:1.20.5.300 11 61 1.2E-11 T 29-03-2018 CHH28_RS11245 53471021a67947aaa355908acccd1fc0 78 Pfam PF04102 SlyX 13 78 3.0E-18 T 29-03-2018 IPR007236 SlyX CHH28_RS16815 ebef78a54d81089194529659d28e3a92 340 Pfam PF10974 Protein of unknown function (DUF2804) 12 339 1.2E-83 T 29-03-2018 IPR021243 Protein of unknown function DUF2804 CHH28_RS05580 35624f96d86c61ffd6b3935e4537597b 403 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 231 1.3E-44 T 29-03-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CHH28_RS05580 35624f96d86c61ffd6b3935e4537597b 403 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 101 1.0E-39 T 29-03-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CHH28_RS05580 35624f96d86c61ffd6b3935e4537597b 403 Gene3D G3DSA:3.30.300.10 135 233 3.2E-42 T 29-03-2018 CHH28_RS05580 35624f96d86c61ffd6b3935e4537597b 403 SUPERFAMILY SSF55973 112 232 5.49E-51 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CHH28_RS05580 35624f96d86c61ffd6b3935e4537597b 403 PIRSF PIRSF000497 1 402 1.7E-169 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CHH28_RS05580 35624f96d86c61ffd6b3935e4537597b 403 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 29-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CHH28_RS05580 35624f96d86c61ffd6b3935e4537597b 403 Gene3D G3DSA:3.30.300.10 12 134 1.0E-42 T 29-03-2018 CHH28_RS05580 35624f96d86c61ffd6b3935e4537597b 403 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 401 56.507 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CHH28_RS05580 35624f96d86c61ffd6b3935e4537597b 403 SUPERFAMILY SSF55973 6 110 3.02E-44 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CHH28_RS05580 35624f96d86c61ffd6b3935e4537597b 403 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 366 2.0E-65 T 29-03-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CHH28_RS05580 35624f96d86c61ffd6b3935e4537597b 403 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 370 1.7E-182 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CHH28_RS05580 35624f96d86c61ffd6b3935e4537597b 403 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 29-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CHH28_RS05580 35624f96d86c61ffd6b3935e4537597b 403 SUPERFAMILY SSF55973 233 401 9.03E-64 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CHH28_RS05580 35624f96d86c61ffd6b3935e4537597b 403 Gene3D G3DSA:3.30.300.10 246 403 3.5E-46 T 29-03-2018 CHH28_RS10655 1c728e47ce41cafdfce33c399def0f15 151 Pfam PF06146 Phosphate-starvation-inducible E 73 140 9.2E-17 T 29-03-2018 IPR020948 Phosphate-starvation-induced PsiE-like CHH28_RS11855 e01668f60872cc197995293a50f632b2 184 Pfam PF01584 CheW-like domain 17 157 1.4E-24 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS11855 e01668f60872cc197995293a50f632b2 184 SUPERFAMILY SSF50341 13 159 4.05E-26 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS11855 e01668f60872cc197995293a50f632b2 184 SMART SM00260 13 155 3.0E-15 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS11855 e01668f60872cc197995293a50f632b2 184 Gene3D G3DSA:2.40.50.180 34 104 2.4E-12 T 29-03-2018 CHH28_RS11855 e01668f60872cc197995293a50f632b2 184 Gene3D G3DSA:2.30.30.40 105 149 1.0E-7 T 29-03-2018 CHH28_RS09745 100ae350b744305dec62cc1443fd3eac 64 SUPERFAMILY SSF57716 2 51 5.99E-21 T 29-03-2018 CHH28_RS09745 100ae350b744305dec62cc1443fd3eac 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 56 16.705 T 29-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CHH28_RS09745 100ae350b744305dec62cc1443fd3eac 64 Gene3D G3DSA:3.30.50.10 1 57 5.7E-25 T 29-03-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 CHH28_RS09745 100ae350b744305dec62cc1443fd3eac 64 Pfam PF03884 DNA gyrase inhibitor YacG 3 51 2.0E-26 T 29-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CHH28_RS09430 50b821b9086fe3dc2c46a19452347942 63 Pfam PF00990 Diguanylate cyclase, GGDEF domain 3 58 1.7E-9 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS09430 50b821b9086fe3dc2c46a19452347942 63 Gene3D G3DSA:3.30.70.270 1 63 1.5E-14 T 29-03-2018 CHH28_RS09430 50b821b9086fe3dc2c46a19452347942 63 SUPERFAMILY SSF55073 2 61 2.12E-12 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS09430 50b821b9086fe3dc2c46a19452347942 63 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 18 61 9.1E-11 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS01770 76917960a3b4aefe9dc05c13d6953eb1 140 Pfam PF00565 Staphylococcal nuclease homologue 52 128 6.6E-7 T 29-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CHH28_RS01770 76917960a3b4aefe9dc05c13d6953eb1 140 Gene3D G3DSA:2.40.50.90 14 139 3.1E-22 T 29-03-2018 IPR035437 Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain CHH28_RS01770 76917960a3b4aefe9dc05c13d6953eb1 140 SMART SM00318 20 137 0.0017 T 29-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CHH28_RS01770 76917960a3b4aefe9dc05c13d6953eb1 140 SUPERFAMILY SSF50199 25 136 4.05E-20 T 29-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CHH28_RS10395 ebc84863c37735f3ade0e2f37551f85c 289 Pfam PF01963 TraB family 24 285 1.7E-65 T 29-03-2018 IPR002816 Pheromone shutdown, TraB CHH28_RS10610 f438c617b34a34e55e73fa8099d659a7 460 Gene3D G3DSA:1.10.630.10 21 460 1.4E-67 T 29-03-2018 CHH28_RS10610 f438c617b34a34e55e73fa8099d659a7 460 PRINTS PR00359 B-class P450 signature 376 391 2.6E-32 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CHH28_RS10610 f438c617b34a34e55e73fa8099d659a7 460 PRINTS PR00359 B-class P450 signature 200 215 2.6E-32 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CHH28_RS10610 f438c617b34a34e55e73fa8099d659a7 460 PRINTS PR00359 B-class P450 signature 407 418 2.6E-32 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CHH28_RS10610 f438c617b34a34e55e73fa8099d659a7 460 PRINTS PR00359 B-class P450 signature 183 199 2.6E-32 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CHH28_RS10610 f438c617b34a34e55e73fa8099d659a7 460 PRINTS PR00359 B-class P450 signature 398 407 2.6E-32 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CHH28_RS10610 f438c617b34a34e55e73fa8099d659a7 460 PRINTS PR00359 B-class P450 signature 249 271 2.6E-32 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CHH28_RS10610 f438c617b34a34e55e73fa8099d659a7 460 PRINTS PR00359 B-class P450 signature 137 148 2.6E-32 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CHH28_RS10610 f438c617b34a34e55e73fa8099d659a7 460 PRINTS PR00359 B-class P450 signature 348 375 2.6E-32 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CHH28_RS10610 f438c617b34a34e55e73fa8099d659a7 460 PRINTS PR00359 B-class P450 signature 331 342 2.6E-32 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CHH28_RS10610 f438c617b34a34e55e73fa8099d659a7 460 Pfam PF00067 Cytochrome P450 239 429 1.5E-18 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CHH28_RS10610 f438c617b34a34e55e73fa8099d659a7 460 SUPERFAMILY SSF48264 68 458 1.57E-80 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CHH28_RS10610 f438c617b34a34e55e73fa8099d659a7 460 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 400 409 - T 29-03-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 CHH28_RS05995 2bb6862d57be8d8b5de5c2607bbfdd06 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.814 T 29-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CHH28_RS05995 2bb6862d57be8d8b5de5c2607bbfdd06 156 PIRSF PIRSF002122 2 156 2.5E-57 T 29-03-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 CHH28_RS05995 2bb6862d57be8d8b5de5c2607bbfdd06 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 29-03-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS05995 2bb6862d57be8d8b5de5c2607bbfdd06 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.6E-65 T 29-03-2018 IPR023798 Ribosomal protein S7 domain CHH28_RS05995 2bb6862d57be8d8b5de5c2607bbfdd06 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 2.2E-67 T 29-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CHH28_RS05995 2bb6862d57be8d8b5de5c2607bbfdd06 156 SUPERFAMILY SSF47973 6 149 2.49E-60 T 29-03-2018 IPR023798 Ribosomal protein S7 domain CHH28_RS05995 2bb6862d57be8d8b5de5c2607bbfdd06 156 Gene3D G3DSA:1.10.455.10 6 156 3.2E-59 T 29-03-2018 IPR023798 Ribosomal protein S7 domain CHH28_RS06115 8e803169d426060bd89e62e075e988c5 440 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 428 28.882 T 29-03-2018 IPR026593 Protein translocase subunit SecY CHH28_RS06115 8e803169d426060bd89e62e075e988c5 440 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 21 424 1.8E-132 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CHH28_RS06115 8e803169d426060bd89e62e075e988c5 440 ProSitePatterns PS00756 Protein secY signature 2. 168 185 - T 29-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CHH28_RS06115 8e803169d426060bd89e62e075e988c5 440 Gene3D G3DSA:1.10.3370.10 13 434 1.3E-156 T 29-03-2018 CHH28_RS06115 8e803169d426060bd89e62e075e988c5 440 Pfam PF00344 SecY translocase 75 412 9.6E-116 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CHH28_RS06115 8e803169d426060bd89e62e075e988c5 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 7.1E-90 T 29-03-2018 CHH28_RS06115 8e803169d426060bd89e62e075e988c5 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 397 415 7.1E-90 T 29-03-2018 CHH28_RS06115 8e803169d426060bd89e62e075e988c5 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 175 198 7.1E-90 T 29-03-2018 CHH28_RS06115 8e803169d426060bd89e62e075e988c5 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 7.1E-90 T 29-03-2018 CHH28_RS06115 8e803169d426060bd89e62e075e988c5 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 22 40 7.1E-90 T 29-03-2018 CHH28_RS06115 8e803169d426060bd89e62e075e988c5 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 7.1E-90 T 29-03-2018 CHH28_RS06115 8e803169d426060bd89e62e075e988c5 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 7.1E-90 T 29-03-2018 CHH28_RS06115 8e803169d426060bd89e62e075e988c5 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 149 174 7.1E-90 T 29-03-2018 CHH28_RS06115 8e803169d426060bd89e62e075e988c5 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 7.1E-90 T 29-03-2018 CHH28_RS06115 8e803169d426060bd89e62e075e988c5 440 ProSitePatterns PS00755 Protein secY signature 1. 75 94 - T 29-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CHH28_RS06115 8e803169d426060bd89e62e075e988c5 440 PIRSF PIRSF004557 9 435 7.5E-119 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CHH28_RS06115 8e803169d426060bd89e62e075e988c5 440 SUPERFAMILY SSF103491 15 419 1.28E-129 T 29-03-2018 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CHH28_RS14745 197691306444127ee0b6aa5aa4b63739 290 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 41 211 9.8E-24 T 29-03-2018 IPR021255 Putative auto-transporter adhesin, head GIN domain CHH28_RS18400 8c3edb85dcf60bc6ecda8c6d32c42104 329 SUPERFAMILY SSF53474 6 293 2.97E-64 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS18400 8c3edb85dcf60bc6ecda8c6d32c42104 329 Pfam PF00561 alpha/beta hydrolase fold 23 275 9.7E-28 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS18400 8c3edb85dcf60bc6ecda8c6d32c42104 329 Gene3D G3DSA:3.40.50.1820 2 296 1.0E-53 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS18890 6d15096e58fb1691ab0dc12821178ade 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 3.2E-11 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CHH28_RS00130 faf5e2386d8cc4b3252a2df051000851 524 SUPERFAMILY SSF53067 52 158 1.42E-7 T 29-03-2018 CHH28_RS14590 147a1c304b909159db8e06d25b86f5cd 352 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 24 322 1.7E-49 T 29-03-2018 IPR010732 Type VI secretion, TssG-like CHH28_RS14590 147a1c304b909159db8e06d25b86f5cd 352 Pfam PF06996 Type VI secretion, TssG 23 322 3.9E-53 T 29-03-2018 IPR010732 Type VI secretion, TssG-like CHH28_RS13415 32ff30f13ba3c30befb39519e2080af8 311 Pfam PF01882 Protein of unknown function DUF58 51 135 2.2E-24 T 29-03-2018 IPR002881 Domain of unknown function DUF58 CHH28_RS13415 32ff30f13ba3c30befb39519e2080af8 311 Gene3D G3DSA:3.40.50.410 63 295 1.3E-20 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS07570 eba94df0683bce0808a5cd491906159f 341 SUPERFAMILY SSF53254 13 159 1.52E-22 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CHH28_RS07570 eba94df0683bce0808a5cd491906159f 341 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 15 84 1.1E-10 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CHH28_RS07570 eba94df0683bce0808a5cd491906159f 341 Gene3D G3DSA:3.40.50.1240 9 183 2.0E-24 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CHH28_RS07570 eba94df0683bce0808a5cd491906159f 341 SUPERFAMILY SSF55811 200 332 1.06E-11 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CHH28_RS07570 eba94df0683bce0808a5cd491906159f 341 SMART SM00855 13 253 9.9E-9 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CHH28_RS07570 eba94df0683bce0808a5cd491906159f 341 Gene3D G3DSA:3.90.79.10 194 340 4.0E-11 T 29-03-2018 CHH28_RS11880 af4fa31cb3ebb070e30562fc76a8638f 348 SUPERFAMILY SSF52172 3 108 2.56E-26 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS11880 af4fa31cb3ebb070e30562fc76a8638f 348 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 346 39.032 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS11880 af4fa31cb3ebb070e30562fc76a8638f 348 Pfam PF01339 CheB methylesterase 163 341 7.0E-61 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS11880 af4fa31cb3ebb070e30562fc76a8638f 348 SMART SM00448 4 127 3.7E-18 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS11880 af4fa31cb3ebb070e30562fc76a8638f 348 PIRSF PIRSF000876 1 345 9.8E-131 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS11880 af4fa31cb3ebb070e30562fc76a8638f 348 Gene3D G3DSA:3.40.50.180 152 345 4.4E-76 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS11880 af4fa31cb3ebb070e30562fc76a8638f 348 Gene3D G3DSA:3.40.50.2300 3 148 4.1E-27 T 29-03-2018 CHH28_RS11880 af4fa31cb3ebb070e30562fc76a8638f 348 Pfam PF00072 Response regulator receiver domain 6 108 9.8E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS11880 af4fa31cb3ebb070e30562fc76a8638f 348 SUPERFAMILY SSF52738 158 343 2.88E-71 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CHH28_RS14485 321211ec84e916397c29b0e3cd323129 409 Pfam PF00482 Type II secretion system (T2SS), protein F 76 198 7.0E-28 T 29-03-2018 IPR018076 Type II secretion system F domain CHH28_RS14485 321211ec84e916397c29b0e3cd323129 409 Pfam PF00482 Type II secretion system (T2SS), protein F 281 400 1.3E-26 T 29-03-2018 IPR018076 Type II secretion system F domain CHH28_RS14485 321211ec84e916397c29b0e3cd323129 409 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 408 3.8E-145 T 29-03-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 CHH28_RS14485 321211ec84e916397c29b0e3cd323129 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 373 387 1.7E-30 T 29-03-2018 IPR003004 GspF/PilC family CHH28_RS14485 321211ec84e916397c29b0e3cd323129 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 71 83 1.7E-30 T 29-03-2018 IPR003004 GspF/PilC family CHH28_RS14485 321211ec84e916397c29b0e3cd323129 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 170 198 1.7E-30 T 29-03-2018 IPR003004 GspF/PilC family CHH28_RS14485 321211ec84e916397c29b0e3cd323129 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 389 408 1.7E-30 T 29-03-2018 IPR003004 GspF/PilC family CHH28_RS02040 33e0dcf58f27de820aba3c2073703d09 277 PIRSF PIRSF016184 3 260 1.2E-55 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CHH28_RS02040 33e0dcf58f27de820aba3c2073703d09 277 SUPERFAMILY SSF54506 6 260 4.89E-81 T 29-03-2018 CHH28_RS02040 33e0dcf58f27de820aba3c2073703d09 277 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 6 223 1.9E-35 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CHH28_RS02040 33e0dcf58f27de820aba3c2073703d09 277 Gene3D G3DSA:3.10.310.10 123 249 5.9E-35 T 29-03-2018 CHH28_RS02040 33e0dcf58f27de820aba3c2073703d09 277 Gene3D G3DSA:3.10.310.10 2 122 5.8E-34 T 29-03-2018 CHH28_RS02040 33e0dcf58f27de820aba3c2073703d09 277 Pfam PF02567 Phenazine biosynthesis-like protein 10 251 2.7E-54 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CHH28_RS09135 37ba1de3dd4882ea8e7a59d1181a29bb 415 Pfam PF00263 Bacterial type II and III secretion system protein 205 366 8.1E-44 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 CHH28_RS09135 37ba1de3dd4882ea8e7a59d1181a29bb 415 Pfam PF13629 Pilus formation protein N terminal region 10 79 2.1E-18 T 29-03-2018 IPR032789 Pilus formation protein, N-terminal CHH28_RS09135 37ba1de3dd4882ea8e7a59d1181a29bb 415 PRINTS PR00811 Bacterial general secretion pathway protein D signature 201 225 1.5E-11 T 29-03-2018 IPR001775 GspD/PilQ family CHH28_RS09135 37ba1de3dd4882ea8e7a59d1181a29bb 415 PRINTS PR00811 Bacterial general secretion pathway protein D signature 331 349 1.5E-11 T 29-03-2018 IPR001775 GspD/PilQ family CHH28_RS09135 37ba1de3dd4882ea8e7a59d1181a29bb 415 PRINTS PR00811 Bacterial general secretion pathway protein D signature 148 158 1.5E-11 T 29-03-2018 IPR001775 GspD/PilQ family CHH28_RS11695 95d3a2c79309ff3d2e3c6f428c1c426e 112 Pfam PF06945 Protein of unknown function (DUF1289) 12 58 5.2E-16 T 29-03-2018 IPR010710 Protein of unknown function DUF1289 CHH28_RS19730 5024eb4460456388db2dca3db3475b0b 447 Pfam PF02321 Outer membrane efflux protein 241 414 2.3E-14 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CHH28_RS19730 5024eb4460456388db2dca3db3475b0b 447 SUPERFAMILY SSF56954 9 413 2.88E-40 T 29-03-2018 CHH28_RS19730 5024eb4460456388db2dca3db3475b0b 447 Gene3D G3DSA:1.20.1600.10 19 414 1.1E-29 T 29-03-2018 CHH28_RS00025 5024eb4460456388db2dca3db3475b0b 447 Pfam PF02321 Outer membrane efflux protein 241 414 2.3E-14 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CHH28_RS00025 5024eb4460456388db2dca3db3475b0b 447 SUPERFAMILY SSF56954 9 413 2.88E-40 T 29-03-2018 CHH28_RS00025 5024eb4460456388db2dca3db3475b0b 447 Gene3D G3DSA:1.20.1600.10 19 414 1.1E-29 T 29-03-2018 CHH28_RS12040 e10248a110926ba9ecd3a1fef7647c5b 223 SUPERFAMILY SSF51735 1 223 5.69E-71 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS12040 e10248a110926ba9ecd3a1fef7647c5b 223 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 6.9E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS12040 e10248a110926ba9ecd3a1fef7647c5b 223 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 6.9E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS12040 e10248a110926ba9ecd3a1fef7647c5b 223 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 6.9E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS12040 e10248a110926ba9ecd3a1fef7647c5b 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 2.8E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS12040 e10248a110926ba9ecd3a1fef7647c5b 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 2.8E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS12040 e10248a110926ba9ecd3a1fef7647c5b 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 2.8E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS12040 e10248a110926ba9ecd3a1fef7647c5b 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.8E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS12040 e10248a110926ba9ecd3a1fef7647c5b 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 2.8E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS12040 e10248a110926ba9ecd3a1fef7647c5b 223 Gene3D G3DSA:3.40.50.720 2 185 3.2E-46 T 29-03-2018 CHH28_RS12040 e10248a110926ba9ecd3a1fef7647c5b 223 Pfam PF00106 short chain dehydrogenase 3 184 1.3E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS19170 58677b0bfb4ec282eb6a4d2dbf15805d 371 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 39.051 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS19170 58677b0bfb4ec282eb6a4d2dbf15805d 371 Pfam PF00925 GTP cyclohydrolase II 213 368 6.3E-28 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CHH28_RS19170 58677b0bfb4ec282eb6a4d2dbf15805d 371 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.4E-82 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS19170 58677b0bfb4ec282eb6a4d2dbf15805d 371 SUPERFAMILY SSF55821 2 202 9.16E-86 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CHH28_RS19170 58677b0bfb4ec282eb6a4d2dbf15805d 371 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 199 1.2E-73 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS19170 58677b0bfb4ec282eb6a4d2dbf15805d 371 Gene3D G3DSA:3.90.870.10 1 212 4.5E-93 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CHH28_RS19170 58677b0bfb4ec282eb6a4d2dbf15805d 371 PIRSF PIRSF001259 2 371 8.7E-110 T 29-03-2018 CHH28_RS19170 58677b0bfb4ec282eb6a4d2dbf15805d 371 SUPERFAMILY SSF142695 205 369 1.31E-37 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CHH28_RS05735 a7cc56e269c3ba2dc36412960909592f 140 Gene3D G3DSA:3.40.190.10 22 138 1.9E-11 T 29-03-2018 CHH28_RS05735 a7cc56e269c3ba2dc36412960909592f 140 SUPERFAMILY SSF53850 13 137 4.34E-14 T 29-03-2018 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 29-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 SUPERFAMILY SSF51905 1 314 7.2E-55 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 2.9E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 Gene3D G3DSA:3.50.50.60 128 243 1.5E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.6E-41 T 29-03-2018 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.6E-41 T 29-03-2018 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.6E-41 T 29-03-2018 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.6E-41 T 29-03-2018 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.6E-41 T 29-03-2018 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 6.9E-124 T 29-03-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 9.4E-79 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 9.4E-79 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 9.4E-79 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 9.4E-79 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 9.4E-79 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 9.4E-79 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 9.4E-79 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 9.4E-79 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 9.4E-79 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 Gene3D G3DSA:3.50.50.60 249 320 9.1E-10 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS10255 68abdb32b5e5139ccfcd0ad29f9ff862 320 Gene3D G3DSA:3.50.50.60 1 127 1.6E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS02730 9d8f26822cddfb9977bd13375dc351fd 389 TIGRFAM TIGR04039 MXAN_0977_Heme2: di-heme enzyme, MXAN_0977 family 54 383 2.9E-142 T 29-03-2018 IPR023929 Di-heme enzyme, MXAN0977 CHH28_RS02730 9d8f26822cddfb9977bd13375dc351fd 389 Gene3D G3DSA:1.10.760.10 51 201 4.6E-33 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS02730 9d8f26822cddfb9977bd13375dc351fd 389 PIRSF PIRSF000294 6 387 4.4E-59 T 29-03-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 CHH28_RS02730 9d8f26822cddfb9977bd13375dc351fd 389 SUPERFAMILY SSF46626 288 369 8.93E-26 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS02730 9d8f26822cddfb9977bd13375dc351fd 389 SUPERFAMILY SSF46626 213 255 8.93E-26 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS02730 9d8f26822cddfb9977bd13375dc351fd 389 Pfam PF03150 Di-haem cytochrome c peroxidase 63 212 5.3E-35 T 29-03-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CHH28_RS02730 9d8f26822cddfb9977bd13375dc351fd 389 Gene3D G3DSA:1.10.760.10 202 371 9.4E-37 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS02730 9d8f26822cddfb9977bd13375dc351fd 389 SUPERFAMILY SSF46626 49 205 1.02E-38 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS06800 2e6b987ac14d46f6d0dfbf1676b8ac66 332 SUPERFAMILY SSF56524 77 328 6.8E-92 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CHH28_RS06800 2e6b987ac14d46f6d0dfbf1676b8ac66 332 Gene3D G3DSA:3.90.420.10 46 291 2.0E-60 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CHH28_RS06800 2e6b987ac14d46f6d0dfbf1676b8ac66 332 Pfam PF00174 Oxidoreductase molybdopterin binding domain 109 266 1.4E-29 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CHH28_RS06800 2e6b987ac14d46f6d0dfbf1676b8ac66 332 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 9 332 54.569 T 29-03-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 CHH28_RS13460 378f9378e443763964006238270dc0af 985 Gene3D G3DSA:2.60.120.640 53 137 8.5E-7 T 29-03-2018 CHH28_RS13460 378f9378e443763964006238270dc0af 985 Gene3D G3DSA:2.60.40.10 347 437 1.3E-8 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS13460 378f9378e443763964006238270dc0af 985 Gene3D G3DSA:2.60.40.10 138 215 8.3E-11 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS13460 378f9378e443763964006238270dc0af 985 Gene3D G3DSA:2.60.40.10 216 313 9.2E-16 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS13460 378f9378e443763964006238270dc0af 985 Gene3D G3DSA:2.60.40.10 438 533 0.0062 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS13460 378f9378e443763964006238270dc0af 985 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 536 578 6.7E-19 T 29-03-2018 IPR030916 ELWxxDGT repeat CHH28_RS13460 378f9378e443763964006238270dc0af 985 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 951 980 7.0E-11 T 29-03-2018 IPR030916 ELWxxDGT repeat CHH28_RS13460 378f9378e443763964006238270dc0af 985 SUPERFAMILY SSF49313 226 314 2.04E-5 T 29-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 CHH28_RS10715 694845d9fd354c1a14f271931f95d022 104 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 76 1.2E-9 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS10715 694845d9fd354c1a14f271931f95d022 104 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 78 1.2E-16 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS10715 694845d9fd354c1a14f271931f95d022 104 Gene3D G3DSA:3.40.50.1000 4 103 1.3E-18 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS10715 694845d9fd354c1a14f271931f95d022 104 SUPERFAMILY SSF56784 7 98 3.52E-22 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS17935 08eb6e43901f6ac9e254e21c5b639268 216 Gene3D G3DSA:3.40.50.1820 4 215 1.7E-30 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS17935 08eb6e43901f6ac9e254e21c5b639268 216 SUPERFAMILY SSF53474 13 215 7.42E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS17935 08eb6e43901f6ac9e254e21c5b639268 216 Pfam PF02230 Phospholipase/Carboxylesterase 11 212 3.4E-36 T 29-03-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 CHH28_RS04015 7db67e6454eea415012aa9b62bd632ee 213 Gene3D G3DSA:3.40.50.150 4 210 7.4E-33 T 29-03-2018 CHH28_RS04015 7db67e6454eea415012aa9b62bd632ee 213 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 28 205 3.2E-57 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CHH28_RS04015 7db67e6454eea415012aa9b62bd632ee 213 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 26.978 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CHH28_RS04015 7db67e6454eea415012aa9b62bd632ee 213 SUPERFAMILY SSF53335 8 208 4.89E-38 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS04015 7db67e6454eea415012aa9b62bd632ee 213 PIRSF PIRSF003078 1 210 3.2E-56 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CHH28_RS04015 7db67e6454eea415012aa9b62bd632ee 213 Pfam PF02527 rRNA small subunit methyltransferase G 23 203 1.9E-62 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CHH28_RS11415 654ff02759e2362a1025f7e33f917e57 344 Pfam PF13609 Gram-negative porin 13 229 2.4E-14 T 29-03-2018 CHH28_RS11415 654ff02759e2362a1025f7e33f917e57 344 Gene3D G3DSA:2.40.160.10 7 344 1.7E-28 T 29-03-2018 CHH28_RS11415 654ff02759e2362a1025f7e33f917e57 344 SUPERFAMILY SSF56935 29 344 1.83E-28 T 29-03-2018 CHH28_RS08485 dc55ea77c9f057460dc00929c7339767 158 Pfam PF05981 CreA protein 25 147 9.4E-45 T 29-03-2018 IPR010292 Uncharacterised protein family CreA CHH28_RS08485 dc55ea77c9f057460dc00929c7339767 158 PIRSF PIRSF003174 1 156 2.2E-47 T 29-03-2018 IPR010292 Uncharacterised protein family CreA CHH28_RS04610 38bd015438d0af0e79f3c46847ab0c82 347 Pfam PF12849 PBP superfamily domain 18 310 8.1E-43 T 29-03-2018 IPR024370 PBP domain CHH28_RS04610 38bd015438d0af0e79f3c46847ab0c82 347 Gene3D G3DSA:3.40.190.10 185 343 1.5E-18 T 29-03-2018 CHH28_RS04610 38bd015438d0af0e79f3c46847ab0c82 347 Gene3D G3DSA:3.40.190.10 25 173 8.8E-21 T 29-03-2018 CHH28_RS04610 38bd015438d0af0e79f3c46847ab0c82 347 SUPERFAMILY SSF53850 25 340 9.77E-65 T 29-03-2018 CHH28_RS14470 901e23acb2b3d2d4f3afa823dbcde79b 309 Gene3D G3DSA:3.40.50.1220 185 309 1.5E-60 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CHH28_RS14470 901e23acb2b3d2d4f3afa823dbcde79b 309 SMART SM00893 3 182 5.5E-52 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CHH28_RS14470 901e23acb2b3d2d4f3afa823dbcde79b 309 SUPERFAMILY SSF52402 3 186 2.43E-55 T 29-03-2018 CHH28_RS14470 901e23acb2b3d2d4f3afa823dbcde79b 309 Gene3D G3DSA:3.40.50.620 1 183 7.0E-39 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS14470 901e23acb2b3d2d4f3afa823dbcde79b 309 PIRSF PIRSF000089 1 309 7.6E-105 T 29-03-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CHH28_RS14470 901e23acb2b3d2d4f3afa823dbcde79b 309 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 272 9.0E-37 T 29-03-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CHH28_RS14470 901e23acb2b3d2d4f3afa823dbcde79b 309 SUPERFAMILY SSF52467 189 308 1.64E-48 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CHH28_RS14470 901e23acb2b3d2d4f3afa823dbcde79b 309 Pfam PF01012 Electron transfer flavoprotein domain 4 170 3.2E-38 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CHH28_RS14470 901e23acb2b3d2d4f3afa823dbcde79b 309 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 253 279 - T 29-03-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 CHH28_RS01140 80736d80ba699690fce3617e4fbf75a4 322 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 30 206 1.4E-20 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS01140 80736d80ba699690fce3617e4fbf75a4 322 Pfam PF12833 Helix-turn-helix domain 240 315 5.5E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS01140 80736d80ba699690fce3617e4fbf75a4 322 SMART SM00342 232 314 3.3E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS01140 80736d80ba699690fce3617e4fbf75a4 322 Gene3D G3DSA:1.10.10.60 51 269 0.15 T 29-03-2018 CHH28_RS01140 80736d80ba699690fce3617e4fbf75a4 322 SUPERFAMILY SSF46689 267 316 1.08E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS01140 80736d80ba699690fce3617e4fbf75a4 322 Gene3D G3DSA:1.10.10.60 270 317 9.8E-13 T 29-03-2018 CHH28_RS06630 1a1c1b57e6c418ae81d85ba352fbcb93 544 SMART SM00304 213 267 1.6E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS06630 1a1c1b57e6c418ae81d85ba352fbcb93 544 SMART SM01049 36 129 8.3E-37 T 29-03-2018 IPR033480 Single Cache domain 2 CHH28_RS06630 1a1c1b57e6c418ae81d85ba352fbcb93 544 Pfam PF00672 HAMP domain 213 263 3.9E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS06630 1a1c1b57e6c418ae81d85ba352fbcb93 544 Pfam PF08269 Cache domain 36 195 7.5E-43 T 29-03-2018 IPR004010 Double Cache domain 2 CHH28_RS06630 1a1c1b57e6c418ae81d85ba352fbcb93 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 509 7.3E-42 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS06630 1a1c1b57e6c418ae81d85ba352fbcb93 544 Gene3D G3DSA:3.30.450.20 23 199 9.9E-52 T 29-03-2018 CHH28_RS06630 1a1c1b57e6c418ae81d85ba352fbcb93 544 SMART SM00283 282 543 4.0E-79 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS06630 1a1c1b57e6c418ae81d85ba352fbcb93 544 Gene3D G3DSA:1.10.287.950 312 544 1.4E-52 T 29-03-2018 CHH28_RS06630 1a1c1b57e6c418ae81d85ba352fbcb93 544 Gene3D G3DSA:1.10.287.950 219 311 6.8E-5 T 29-03-2018 CHH28_RS06630 1a1c1b57e6c418ae81d85ba352fbcb93 544 SUPERFAMILY SSF58104 235 544 2.09E-76 T 29-03-2018 CHH28_RS18935 50923a846999d99cbdf995450bc8bfc7 229 Pfam PF02107 Flagellar L-ring protein 49 228 4.9E-56 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CHH28_RS18935 50923a846999d99cbdf995450bc8bfc7 229 PRINTS PR01008 Flagellar L-ring protein signature 70 82 1.6E-21 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CHH28_RS18935 50923a846999d99cbdf995450bc8bfc7 229 PRINTS PR01008 Flagellar L-ring protein signature 205 219 1.6E-21 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CHH28_RS18935 50923a846999d99cbdf995450bc8bfc7 229 PRINTS PR01008 Flagellar L-ring protein signature 189 203 1.6E-21 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CHH28_RS18935 50923a846999d99cbdf995450bc8bfc7 229 PRINTS PR01008 Flagellar L-ring protein signature 168 184 1.6E-21 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CHH28_RS18935 50923a846999d99cbdf995450bc8bfc7 229 PRINTS PR01008 Flagellar L-ring protein signature 142 157 1.6E-21 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CHH28_RS18935 50923a846999d99cbdf995450bc8bfc7 229 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 226 25.251 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CHH28_RS06390 2c2ad73c893a7e60119f01dc15d44bcc 385 Gene3D G3DSA:3.30.565.10 188 370 8.3E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS06390 2c2ad73c893a7e60119f01dc15d44bcc 385 Pfam PF06580 Histidine kinase 172 251 7.8E-25 T 29-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CHH28_RS06390 2c2ad73c893a7e60119f01dc15d44bcc 385 SUPERFAMILY SSF55874 235 369 9.61E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS05105 ecba3fc86156208909dba5d7849d079a 311 Pfam PF00583 Acetyltransferase (GNAT) family 204 279 3.7E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS05105 ecba3fc86156208909dba5d7849d079a 311 Gene3D G3DSA:3.40.630.30 95 308 2.4E-22 T 29-03-2018 CHH28_RS05105 ecba3fc86156208909dba5d7849d079a 311 SUPERFAMILY SSF55729 214 310 5.65E-22 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS10300 4a4334b89ecf79493831d15e19db9228 425 Gene3D G3DSA:1.10.3860.10 1 413 4.2E-132 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS10300 4a4334b89ecf79493831d15e19db9228 425 Pfam PF00375 Sodium:dicarboxylate symporter family 3 405 3.2E-127 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS10300 4a4334b89ecf79493831d15e19db9228 425 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 1.4E-41 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS10300 4a4334b89ecf79493831d15e19db9228 425 PRINTS PR00173 Glutamate-aspartate symporter signature 231 250 1.4E-41 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS10300 4a4334b89ecf79493831d15e19db9228 425 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 1.4E-41 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS10300 4a4334b89ecf79493831d15e19db9228 425 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 1.4E-41 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS10300 4a4334b89ecf79493831d15e19db9228 425 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 1.4E-41 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS10300 4a4334b89ecf79493831d15e19db9228 425 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 1.4E-41 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS10300 4a4334b89ecf79493831d15e19db9228 425 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 1.4E-41 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS10300 4a4334b89ecf79493831d15e19db9228 425 SUPERFAMILY SSF118215 3 407 7.98E-115 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS17185 f85644bbca4213e16d180da69bb4a32f 234 Pfam PF08279 HTH domain 6 59 3.9E-17 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 CHH28_RS17185 f85644bbca4213e16d180da69bb4a32f 234 Gene3D G3DSA:1.10.10.10 1 63 4.4E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17185 f85644bbca4213e16d180da69bb4a32f 234 Pfam PF13280 WYL domain 137 229 2.1E-20 T 29-03-2018 IPR026881 WYL domain CHH28_RS17185 f85644bbca4213e16d180da69bb4a32f 234 SUPERFAMILY SSF46785 3 61 2.06E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS12855 46dcf295ba54c1184d75e55da03607a2 570 Gene3D G3DSA:3.40.47.10 2 330 1.8E-38 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS12855 46dcf295ba54c1184d75e55da03607a2 570 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 330 442 2.4E-7 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CHH28_RS12855 46dcf295ba54c1184d75e55da03607a2 570 Gene3D G3DSA:3.40.47.10 335 498 2.0E-23 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS12855 46dcf295ba54c1184d75e55da03607a2 570 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 131 316 5.6E-12 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CHH28_RS12855 46dcf295ba54c1184d75e55da03607a2 570 SUPERFAMILY SSF53901 110 326 5.99E-28 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS12855 46dcf295ba54c1184d75e55da03607a2 570 SUPERFAMILY SSF53901 290 489 2.98E-28 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CHH28_RS17745 3f8b5c489e5dd9a5d5ff4e164977d9ea 293 Pfam PF03547 Membrane transport protein 152 288 4.0E-12 T 29-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CHH28_RS01095 6192a702017a8796e25b27009afbaf54 243 SUPERFAMILY SSF111364 23 242 1.15E-45 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CHH28_RS01095 6192a702017a8796e25b27009afbaf54 243 Pfam PF16412 Domain of unknown function (DUF5020) 37 212 2.9E-9 T 29-03-2018 CHH28_RS01095 6192a702017a8796e25b27009afbaf54 243 Gene3D G3DSA:2.40.230.20 17 240 3.6E-46 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CHH28_RS03055 cde0c4bad80af4b13c99490f05261d45 163 Gene3D G3DSA:1.20.120.10 38 163 5.6E-33 T 29-03-2018 CHH28_RS03055 cde0c4bad80af4b13c99490f05261d45 163 Pfam PF01322 Cytochrome C' 44 162 9.1E-34 T 29-03-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 CHH28_RS03055 cde0c4bad80af4b13c99490f05261d45 163 PIRSF PIRSF000027 20 163 7.5E-38 T 29-03-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 CHH28_RS03055 cde0c4bad80af4b13c99490f05261d45 163 SUPERFAMILY SSF47175 41 162 4.42E-35 T 29-03-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 CHH28_RS12010 2b8841b0a2e883e7c3426357de5ab357 403 PIRSF PIRSF016055 1 403 3.5E-195 T 29-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CHH28_RS12010 2b8841b0a2e883e7c3426357de5ab357 403 Pfam PF03116 NQR2, RnfD, RnfE family 41 395 1.0E-108 T 29-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 CHH28_RS12010 2b8841b0a2e883e7c3426357de5ab357 403 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 398 1.5E-179 T 29-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CHH28_RS12010 2b8841b0a2e883e7c3426357de5ab357 403 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 402 37.094 T 29-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CHH28_RS10365 b594a44e8d9da1ed66b10846ac937546 421 SUPERFAMILY SSF52540 271 417 2.21E-12 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS10365 b594a44e8d9da1ed66b10846ac937546 421 SUPERFAMILY SSF109604 51 151 2.26E-8 T 29-03-2018 CHH28_RS10365 b594a44e8d9da1ed66b10846ac937546 421 Pfam PF13671 AAA domain 275 396 3.7E-15 T 29-03-2018 CHH28_RS10365 b594a44e8d9da1ed66b10846ac937546 421 Gene3D G3DSA:1.10.472.50 2 148 7.8E-6 T 29-03-2018 CHH28_RS10365 b594a44e8d9da1ed66b10846ac937546 421 Gene3D G3DSA:3.40.50.300 273 401 8.8E-12 T 29-03-2018 CHH28_RS06365 14696bcf883a83d1a0c8e211619d2c04 332 Pfam PF01032 FecCD transport family 2 324 2.2E-88 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CHH28_RS06365 14696bcf883a83d1a0c8e211619d2c04 332 SUPERFAMILY SSF81345 2 325 6.41E-77 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CHH28_RS06365 14696bcf883a83d1a0c8e211619d2c04 332 Gene3D G3DSA:1.10.3470.10 1 332 6.9E-68 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CHH28_RS12150 5c06b39972c1f9d7f9302bc08e488c9d 275 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 29 254 1.1E-105 T 29-03-2018 IPR022488 Polyphosphate kinase-2-related CHH28_RS12150 5c06b39972c1f9d7f9302bc08e488c9d 275 Gene3D G3DSA:3.40.50.300 14 275 4.4E-102 T 29-03-2018 CHH28_RS12150 5c06b39972c1f9d7f9302bc08e488c9d 275 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 28 255 1.2E-117 T 29-03-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 CHH28_RS12150 5c06b39972c1f9d7f9302bc08e488c9d 275 SUPERFAMILY SSF52540 60 247 5.54E-30 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS12150 5c06b39972c1f9d7f9302bc08e488c9d 275 PIRSF PIRSF028756 4 274 1.5E-123 T 29-03-2018 IPR016898 Polyphosphate kinase 2 CHH28_RS11210 67f9847031bf59250f8e428fc5888722 226 SUPERFAMILY SSF53067 109 207 5.57E-12 T 29-03-2018 CHH28_RS11210 67f9847031bf59250f8e428fc5888722 226 Gene3D G3DSA:3.30.420.40 1 136 1.2E-34 T 29-03-2018 CHH28_RS11210 67f9847031bf59250f8e428fc5888722 226 Pfam PF00814 Glycoprotease family 30 130 7.0E-25 T 29-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CHH28_RS11210 67f9847031bf59250f8e428fc5888722 226 SUPERFAMILY SSF53067 4 103 2.24E-25 T 29-03-2018 CHH28_RS11210 67f9847031bf59250f8e428fc5888722 226 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 209 4.2E-52 T 29-03-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 CHH28_RS04310 d7ac4f1b1e9d87fe085d0b8fec8c5f5f 341 Gene3D G3DSA:1.10.10.60 151 287 7.4E-10 T 29-03-2018 CHH28_RS04310 d7ac4f1b1e9d87fe085d0b8fec8c5f5f 341 Gene3D G3DSA:1.10.10.60 288 340 2.4E-5 T 29-03-2018 CHH28_RS04310 d7ac4f1b1e9d87fe085d0b8fec8c5f5f 341 SMART SM00342 249 331 2.0E-13 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS04310 d7ac4f1b1e9d87fe085d0b8fec8c5f5f 341 SUPERFAMILY SSF46689 243 284 4.47E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS04310 d7ac4f1b1e9d87fe085d0b8fec8c5f5f 341 Pfam PF12833 Helix-turn-helix domain 256 332 1.3E-14 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS19420 82f728931afc6119611070d72181a585 145 Gene3D G3DSA:3.40.630.30 1 143 8.7E-29 T 29-03-2018 CHH28_RS19420 82f728931afc6119611070d72181a585 145 SUPERFAMILY SSF55729 3 141 7.89E-30 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS19420 82f728931afc6119611070d72181a585 145 Pfam PF13673 Acetyltransferase (GNAT) domain 22 139 1.4E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS19390 eab83b8598071e6b218ca76ac6ba5681 173 SUPERFAMILY SSF55083 4 152 8.24E-49 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CHH28_RS19390 eab83b8598071e6b218ca76ac6ba5681 173 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 134 3.9E-33 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CHH28_RS19390 eab83b8598071e6b218ca76ac6ba5681 173 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CHH28_RS19390 eab83b8598071e6b218ca76ac6ba5681 173 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 134 1.9E-40 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CHH28_RS19390 eab83b8598071e6b218ca76ac6ba5681 173 Gene3D G3DSA:3.30.70.560 1 169 2.3E-50 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CHH28_RS00205 96622509b980b9eaa5ccf44d25b45138 393 ProSitePatterns PS00216 Sugar transport proteins signature 1. 57 73 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CHH28_RS00205 96622509b980b9eaa5ccf44d25b45138 393 SUPERFAMILY SSF103473 5 383 1.02E-54 T 29-03-2018 IPR020846 Major facilitator superfamily domain CHH28_RS00205 96622509b980b9eaa5ccf44d25b45138 393 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 374 2.6E-81 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 CHH28_RS00205 96622509b980b9eaa5ccf44d25b45138 393 Pfam PF07690 Major Facilitator Superfamily 7 348 6.2E-42 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CHH28_RS00205 96622509b980b9eaa5ccf44d25b45138 393 Gene3D G3DSA:1.20.1250.20 2 193 4.3E-27 T 29-03-2018 CHH28_RS00205 96622509b980b9eaa5ccf44d25b45138 393 Gene3D G3DSA:1.20.1250.20 194 389 2.4E-11 T 29-03-2018 CHH28_RS13920 3485f0f47aa700bcc1d64c886df43145 157 Pfam PF01575 MaoC like domain 20 116 4.3E-25 T 29-03-2018 IPR002539 MaoC-like domain CHH28_RS13920 3485f0f47aa700bcc1d64c886df43145 157 Gene3D G3DSA:3.10.129.10 7 140 3.9E-39 T 29-03-2018 CHH28_RS13920 3485f0f47aa700bcc1d64c886df43145 157 PRINTS PR01483 Fatty acid synthase signature 48 69 9.4E-8 T 29-03-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 CHH28_RS13920 3485f0f47aa700bcc1d64c886df43145 157 PRINTS PR01483 Fatty acid synthase signature 26 48 9.4E-8 T 29-03-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 CHH28_RS13920 3485f0f47aa700bcc1d64c886df43145 157 SUPERFAMILY SSF54637 5 143 2.22E-43 T 29-03-2018 IPR029069 HotDog domain CHH28_RS08445 9d423515dfa0fea517993a9bab4669c3 130 Gene3D G3DSA:3.30.230.10 3 130 1.1E-53 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CHH28_RS08445 9d423515dfa0fea517993a9bab4669c3 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 6.4E-47 T 29-03-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CHH28_RS08445 9d423515dfa0fea517993a9bab4669c3 130 SUPERFAMILY SSF54211 5 130 2.77E-48 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CHH28_RS08445 9d423515dfa0fea517993a9bab4669c3 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.468 T 29-03-2018 IPR023035 Ribosomal protein S9, bacterial/plastid CHH28_RS08445 9d423515dfa0fea517993a9bab4669c3 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 29-03-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CHH28_RS15485 e021da890b3d403e99ae21d727671e6c 296 Gene3D G3DSA:3.60.110.10 1 296 1.3E-76 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CHH28_RS15485 e021da890b3d403e99ae21d727671e6c 296 SUPERFAMILY SSF56317 3 290 3.27E-80 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CHH28_RS15485 e021da890b3d403e99ae21d727671e6c 296 Pfam PF00795 Carbon-nitrogen hydrolase 4 274 1.0E-53 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CHH28_RS10855 b41804270c50b3cd3ad0555943967e7a 85 SUPERFAMILY SSF46689 1 68 2.69E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS10855 b41804270c50b3cd3ad0555943967e7a 85 Gene3D G3DSA:1.10.10.10 1 70 6.3E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS10855 b41804270c50b3cd3ad0555943967e7a 85 Pfam PF01527 Transposase 2 70 1.0E-21 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CHH28_RS12130 7b04c6e1658a005f7f400a84555ca962 460 Pfam PF13396 Phospholipase_D-nuclease N-terminal 18 56 8.3E-5 T 29-03-2018 IPR027379 Cardiolipin synthase N-terminal CHH28_RS12130 7b04c6e1658a005f7f400a84555ca962 460 Gene3D G3DSA:3.30.870.10 295 443 3.7E-28 T 29-03-2018 CHH28_RS12130 7b04c6e1658a005f7f400a84555ca962 460 SUPERFAMILY SSF56024 67 289 2.29E-49 T 29-03-2018 CHH28_RS12130 7b04c6e1658a005f7f400a84555ca962 460 SMART SM00155 377 404 3.6E-7 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CHH28_RS12130 7b04c6e1658a005f7f400a84555ca962 460 SMART SM00155 208 235 7.4E-5 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CHH28_RS12130 7b04c6e1658a005f7f400a84555ca962 460 Gene3D G3DSA:3.30.870.10 100 289 4.0E-34 T 29-03-2018 CHH28_RS12130 7b04c6e1658a005f7f400a84555ca962 460 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 20 460 1.7E-99 T 29-03-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 CHH28_RS12130 7b04c6e1658a005f7f400a84555ca962 460 Pfam PF13091 PLD-like domain 305 428 2.6E-28 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CHH28_RS12130 7b04c6e1658a005f7f400a84555ca962 460 Pfam PF13091 PLD-like domain 127 263 2.4E-16 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CHH28_RS12130 7b04c6e1658a005f7f400a84555ca962 460 SUPERFAMILY SSF56024 259 437 2.11E-39 T 29-03-2018 CHH28_RS04455 342f5a497154aeed32016e73fd1a5793 405 Gene3D G3DSA:3.40.190.10 1 341 5.4E-6 T 29-03-2018 CHH28_RS01175 b99e13d51840828d6ce725b125013a53 531 Gene3D G3DSA:1.10.760.10 310 530 0.012 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS00630 98262d96797b16e05fd4806125db2899 413 Gene3D G3DSA:3.30.565.10 271 408 9.0E-6 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS00630 98262d96797b16e05fd4806125db2899 413 Gene3D G3DSA:1.10.287.130 192 269 6.4E-8 T 29-03-2018 CHH28_RS00630 98262d96797b16e05fd4806125db2899 413 SUPERFAMILY SSF55874 281 407 4.01E-6 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS00630 98262d96797b16e05fd4806125db2899 413 SUPERFAMILY SSF47384 193 270 1.31E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS15685 a8f7ba1a860b25115604603835996ca1 517 Gene3D G3DSA:3.30.420.40 1 249 1.5E-56 T 29-03-2018 CHH28_RS15685 a8f7ba1a860b25115604603835996ca1 517 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 252 7.2E-44 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CHH28_RS15685 a8f7ba1a860b25115604603835996ca1 517 SUPERFAMILY SSF53067 260 499 3.33E-51 T 29-03-2018 CHH28_RS15685 a8f7ba1a860b25115604603835996ca1 517 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 455 5.2E-30 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CHH28_RS15685 a8f7ba1a860b25115604603835996ca1 517 Gene3D G3DSA:3.30.420.40 250 515 3.9E-50 T 29-03-2018 CHH28_RS15685 a8f7ba1a860b25115604603835996ca1 517 SUPERFAMILY SSF53067 4 254 8.91E-56 T 29-03-2018 CHH28_RS15685 a8f7ba1a860b25115604603835996ca1 517 PIRSF PIRSF000538 2 511 3.0E-112 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CHH28_RS11455 295f8a82301658e44d17b1d82550d09c 244 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 42.923 T 29-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CHH28_RS11455 295f8a82301658e44d17b1d82550d09c 244 Pfam PF00696 Amino acid kinase family 10 218 1.5E-27 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CHH28_RS11455 295f8a82301658e44d17b1d82550d09c 244 SUPERFAMILY SSF53633 8 240 3.01E-70 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CHH28_RS11455 295f8a82301658e44d17b1d82550d09c 244 PIRSF PIRSF005650 4 244 4.3E-89 T 29-03-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 CHH28_RS11455 295f8a82301658e44d17b1d82550d09c 244 Gene3D G3DSA:3.40.1160.10 3 241 1.3E-42 T 29-03-2018 CHH28_RS11455 295f8a82301658e44d17b1d82550d09c 244 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 239 2.1E-98 T 29-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CHH28_RS03580 1da285ce594c5b432de659715af1c9c5 177 PIRSF PIRSF000709 2 85 1.9E-5 T 29-03-2018 CHH28_RS03580 1da285ce594c5b432de659715af1c9c5 177 SUPERFAMILY SSF53254 2 170 2.75E-32 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CHH28_RS03580 1da285ce594c5b432de659715af1c9c5 177 Gene3D G3DSA:3.40.50.1240 3 169 1.1E-29 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CHH28_RS03580 1da285ce594c5b432de659715af1c9c5 177 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 166 8.0E-26 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CHH28_RS03580 1da285ce594c5b432de659715af1c9c5 177 SMART SM00855 2 138 1.3E-11 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CHH28_RS15550 f3ac8e49e1e972fa2a6a05786dd085db 224 Pfam PF09335 SNARE associated Golgi protein 69 179 4.2E-13 T 29-03-2018 IPR032816 SNARE associated Golgi protein CHH28_RS02295 b8a9324f91d375e2d839661cedd0636f 923 SUPERFAMILY SSF56219 778 812 8.24E-31 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS02295 b8a9324f91d375e2d839661cedd0636f 923 SUPERFAMILY SSF56219 459 744 8.24E-31 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS02295 b8a9324f91d375e2d839661cedd0636f 923 Gene3D G3DSA:2.60.40.1260 4 137 5.9E-8 T 29-03-2018 IPR001322 Lamin Tail Domain CHH28_RS02295 b8a9324f91d375e2d839661cedd0636f 923 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 507 795 1.1E-7 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS02295 b8a9324f91d375e2d839661cedd0636f 923 Gene3D G3DSA:3.60.10.10 481 802 2.5E-31 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS02295 b8a9324f91d375e2d839661cedd0636f 923 Gene3D G3DSA:2.60.40.10 803 898 7.7E-5 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS12840 94672934771d05217b6480e2539ff221 148 Pfam PF13511 Domain of unknown function (DUF4124) 10 56 7.5E-15 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 CHH28_RS00570 19bb4613df1c514b463fb522b3a5b5f3 132 Pfam PF04355 SmpA / OmlA family 31 98 4.1E-21 T 29-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CHH28_RS00570 19bb4613df1c514b463fb522b3a5b5f3 132 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 2 123 26.864 T 29-03-2018 IPR026592 Outer membrane protein assembly factor BamE CHH28_RS00570 19bb4613df1c514b463fb522b3a5b5f3 132 Gene3D G3DSA:3.30.1450.10 31 100 2.5E-8 T 29-03-2018 CHH28_RS07755 595dd1096335c583e609fb408febadc9 927 Gene3D G3DSA:3.40.50.1820 409 912 2.9E-18 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS07755 595dd1096335c583e609fb408febadc9 927 Pfam PF12262 Bacterial virulence factor lipase N-terminal 49 272 1.3E-15 T 29-03-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain CHH28_RS07755 595dd1096335c583e609fb408febadc9 927 SUPERFAMILY SSF53474 484 540 5.5E-15 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS07755 595dd1096335c583e609fb408febadc9 927 SUPERFAMILY SSF53474 666 773 5.5E-15 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS07755 595dd1096335c583e609fb408febadc9 927 Pfam PF12697 Alpha/beta hydrolase family 501 727 6.5E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS02590 7382783a345bf78412e914e8024174e5 129 Gene3D G3DSA:3.10.450.50 3 129 4.4E-13 T 29-03-2018 CHH28_RS02590 7382783a345bf78412e914e8024174e5 129 SUPERFAMILY SSF54427 8 126 6.31E-16 T 29-03-2018 IPR032710 NTF2-like domain CHH28_RS02590 7382783a345bf78412e914e8024174e5 129 Pfam PF13474 SnoaL-like domain 7 117 5.6E-7 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CHH28_RS09105 ef2f7944d9b074045230678110c80b89 339 SUPERFAMILY SSF69322 44 236 1.01E-12 T 29-03-2018 CHH28_RS09105 ef2f7944d9b074045230678110c80b89 339 Gene3D G3DSA:2.130.10.10 10 145 3.0E-5 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS09105 ef2f7944d9b074045230678110c80b89 339 Gene3D G3DSA:2.130.10.10 146 244 4.8E-6 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS04805 c8ba975d5638e1c704a5803de172b843 161 SUPERFAMILY SSF46785 21 153 4.29E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04805 c8ba975d5638e1c704a5803de172b843 161 Pfam PF01475 Ferric uptake regulator family 29 141 2.6E-9 T 29-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CHH28_RS04805 c8ba975d5638e1c704a5803de172b843 161 Gene3D G3DSA:1.10.10.10 6 99 1.6E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS05000 3a49947ffc79a9f5f99c20ae3661feb3 352 Pfam PF03088 Strictosidine synthase 147 233 1.8E-22 T 29-03-2018 IPR018119 Strictosidine synthase, conserved region GO:0009058|GO:0016844 CHH28_RS05000 3a49947ffc79a9f5f99c20ae3661feb3 352 Gene3D G3DSA:2.120.10.30 45 351 4.7E-35 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CHH28_RS05000 3a49947ffc79a9f5f99c20ae3661feb3 352 SUPERFAMILY SSF63829 49 267 4.09E-42 T 29-03-2018 CHH28_RS05000 3a49947ffc79a9f5f99c20ae3661feb3 352 SUPERFAMILY SSF63829 300 350 4.09E-42 T 29-03-2018 CHH28_RS01695 3c8dd6d999ab945a4c3e2fc17e72f7e9 354 SUPERFAMILY SSF53067 194 352 4.94E-27 T 29-03-2018 CHH28_RS01695 3c8dd6d999ab945a4c3e2fc17e72f7e9 354 Gene3D G3DSA:3.30.420.40 1 172 7.2E-34 T 29-03-2018 CHH28_RS01695 3c8dd6d999ab945a4c3e2fc17e72f7e9 354 Gene3D G3DSA:3.30.420.40 300 354 1.1E-5 T 29-03-2018 CHH28_RS01695 3c8dd6d999ab945a4c3e2fc17e72f7e9 354 Pfam PF11104 Type IV pilus assembly protein PilM; 14 353 5.7E-135 T 29-03-2018 IPR005883 Type IV pilus assembly protein PilM CHH28_RS01695 3c8dd6d999ab945a4c3e2fc17e72f7e9 354 SUPERFAMILY SSF53067 12 176 1.99E-11 T 29-03-2018 CHH28_RS01695 3c8dd6d999ab945a4c3e2fc17e72f7e9 354 PIRSF PIRSF019169 1 354 5.8E-124 T 29-03-2018 IPR005883 Type IV pilus assembly protein PilM CHH28_RS01695 3c8dd6d999ab945a4c3e2fc17e72f7e9 354 Gene3D G3DSA:3.30.420.40 188 299 7.1E-10 T 29-03-2018 CHH28_RS01695 3c8dd6d999ab945a4c3e2fc17e72f7e9 354 SMART SM00842 12 180 4.5E-4 T 29-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CHH28_RS01695 3c8dd6d999ab945a4c3e2fc17e72f7e9 354 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 11 353 6.3E-124 T 29-03-2018 IPR005883 Type IV pilus assembly protein PilM CHH28_RS09470 c00394b160df565af23cce0db2ebd744 84 SUPERFAMILY SSF50182 7 69 1.93E-24 T 29-03-2018 IPR010920 LSM domain CHH28_RS09470 c00394b160df565af23cce0db2ebd744 84 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 64 27.485 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CHH28_RS09470 c00394b160df565af23cce0db2ebd744 84 Pfam PF17209 Hfq protein 7 68 1.3E-31 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CHH28_RS09470 c00394b160df565af23cce0db2ebd744 84 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 64 1.9E-30 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CHH28_RS09470 c00394b160df565af23cce0db2ebd744 84 Gene3D G3DSA:2.30.30.100 4 73 5.1E-34 T 29-03-2018 CHH28_RS00495 716adf8c6ddf0dc356bd5c4f793a5f72 206 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 12 205 30.11 T 29-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CHH28_RS00495 716adf8c6ddf0dc356bd5c4f793a5f72 206 Pfam PF01728 FtsJ-like methyltransferase 28 204 6.0E-58 T 29-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CHH28_RS00495 716adf8c6ddf0dc356bd5c4f793a5f72 206 SUPERFAMILY SSF53335 27 205 6.98E-42 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS00495 716adf8c6ddf0dc356bd5c4f793a5f72 206 Gene3D G3DSA:3.40.50.150 1 206 3.8E-58 T 29-03-2018 CHH28_RS00495 716adf8c6ddf0dc356bd5c4f793a5f72 206 PIRSF PIRSF005461 1 206 1.0E-77 T 29-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CHH28_RS09550 ae493436a052698a21b4c280a05bb0b1 88 SUPERFAMILY SSF46992 3 86 2.49E-28 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS09550 ae493436a052698a21b4c280a05bb0b1 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.453 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS09550 ae493436a052698a21b4c280a05bb0b1 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 23 88 3.0E-16 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS09550 ae493436a052698a21b4c280a05bb0b1 88 Pfam PF01649 Ribosomal protein S20 2 83 1.7E-24 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS09550 ae493436a052698a21b4c280a05bb0b1 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 83 4.5E-25 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS09550 ae493436a052698a21b4c280a05bb0b1 88 Gene3D G3DSA:1.20.58.110 1 88 1.6E-26 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06525 b102623d73f615b7a60782acf62bb589 152 Pfam PF14467 Domain of unknown function (DUF4426) 29 151 5.9E-40 T 29-03-2018 IPR025218 Domain of unknown function DUF4426 CHH28_RS09100 2ad335b7655ff95032a338929c641d07 226 Pfam PF01810 LysE type translocator 17 200 8.0E-28 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS09100 2ad335b7655ff95032a338929c641d07 226 PIRSF PIRSF006324 1 207 3.5E-52 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS13150 ff12714ecc8c92366d10ba87f28f13de 532 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 19 521 1.4E-212 T 29-03-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 CHH28_RS13150 ff12714ecc8c92366d10ba87f28f13de 532 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 28 470 5.0E-152 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13150 ff12714ecc8c92366d10ba87f28f13de 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 315 336 2.3E-124 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13150 ff12714ecc8c92366d10ba87f28f13de 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 194 213 2.3E-124 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13150 ff12714ecc8c92366d10ba87f28f13de 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 291 306 2.3E-124 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13150 ff12714ecc8c92366d10ba87f28f13de 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 378 397 2.3E-124 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13150 ff12714ecc8c92366d10ba87f28f13de 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 428 449 2.3E-124 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13150 ff12714ecc8c92366d10ba87f28f13de 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 135 147 2.3E-124 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13150 ff12714ecc8c92366d10ba87f28f13de 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 245 266 2.3E-124 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13150 ff12714ecc8c92366d10ba87f28f13de 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 350 368 2.3E-124 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13150 ff12714ecc8c92366d10ba87f28f13de 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 18 43 2.3E-124 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13150 ff12714ecc8c92366d10ba87f28f13de 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 92 116 2.3E-124 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13150 ff12714ecc8c92366d10ba87f28f13de 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 165 183 2.3E-124 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13150 ff12714ecc8c92366d10ba87f28f13de 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 65 88 2.3E-124 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13150 ff12714ecc8c92366d10ba87f28f13de 532 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 247 301 - T 29-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13150 ff12714ecc8c92366d10ba87f28f13de 532 Gene3D G3DSA:1.20.210.10 17 524 9.2E-218 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS13150 ff12714ecc8c92366d10ba87f28f13de 532 SUPERFAMILY SSF81442 16 522 2.09E-195 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS06765 3d7fa672b262d0dff0a38f0f34e7285f 454 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 302 309 - T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CHH28_RS06765 3d7fa672b262d0dff0a38f0f34e7285f 454 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 143 443 7.0E-106 T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CHH28_RS06765 3d7fa672b262d0dff0a38f0f34e7285f 454 SUPERFAMILY SSF53187 138 451 4.08E-107 T 29-03-2018 CHH28_RS06765 3d7fa672b262d0dff0a38f0f34e7285f 454 Gene3D G3DSA:3.40.220.10 4 132 7.3E-4 T 29-03-2018 CHH28_RS06765 3d7fa672b262d0dff0a38f0f34e7285f 454 Gene3D G3DSA:3.40.630.10 133 452 1.0E-120 T 29-03-2018 CHH28_RS06765 3d7fa672b262d0dff0a38f0f34e7285f 454 PRINTS PR00481 Cytosol aminopeptidase signature 239 260 1.0E-47 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CHH28_RS06765 3d7fa672b262d0dff0a38f0f34e7285f 454 PRINTS PR00481 Cytosol aminopeptidase signature 326 341 1.0E-47 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CHH28_RS06765 3d7fa672b262d0dff0a38f0f34e7285f 454 PRINTS PR00481 Cytosol aminopeptidase signature 276 297 1.0E-47 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CHH28_RS06765 3d7fa672b262d0dff0a38f0f34e7285f 454 PRINTS PR00481 Cytosol aminopeptidase signature 298 318 1.0E-47 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CHH28_RS06765 3d7fa672b262d0dff0a38f0f34e7285f 454 PRINTS PR00481 Cytosol aminopeptidase signature 217 234 1.0E-47 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CHH28_RS07395 9f152190fa4bf8e0e892b655a72bd276 282 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 77 1.8E-10 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CHH28_RS07395 9f152190fa4bf8e0e892b655a72bd276 282 SUPERFAMILY SSF51735 1 279 7.84E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS07395 9f152190fa4bf8e0e892b655a72bd276 282 Gene3D G3DSA:3.40.50.720 1 281 1.6E-31 T 29-03-2018 CHH28_RS11080 e2d83ba5562d70fb963733b34712cfa3 271 SUPERFAMILY SSF109604 15 253 2.23E-42 T 29-03-2018 CHH28_RS11080 e2d83ba5562d70fb963733b34712cfa3 271 Gene3D G3DSA:1.10.3210.10 1 259 1.0E-35 T 29-03-2018 CHH28_RS11080 e2d83ba5562d70fb963733b34712cfa3 271 Pfam PF08668 HDOD domain 19 191 2.0E-35 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD CHH28_RS02970 19aaa6179bc02fb32c3b56825d94e6d9 526 SUPERFAMILY SSF56235 1 515 7.72E-158 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS02970 19aaa6179bc02fb32c3b56825d94e6d9 526 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 2 510 6.0E-131 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CHH28_RS02970 19aaa6179bc02fb32c3b56825d94e6d9 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 331 349 2.5E-63 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CHH28_RS02970 19aaa6179bc02fb32c3b56825d94e6d9 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 228 247 2.5E-63 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CHH28_RS02970 19aaa6179bc02fb32c3b56825d94e6d9 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 82 100 2.5E-63 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CHH28_RS02970 19aaa6179bc02fb32c3b56825d94e6d9 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 394 409 2.5E-63 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CHH28_RS02970 19aaa6179bc02fb32c3b56825d94e6d9 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 9 34 2.5E-63 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CHH28_RS02970 19aaa6179bc02fb32c3b56825d94e6d9 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 100 119 2.5E-63 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CHH28_RS02970 19aaa6179bc02fb32c3b56825d94e6d9 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 353 371 2.5E-63 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CHH28_RS02970 19aaa6179bc02fb32c3b56825d94e6d9 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 198 214 2.5E-63 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CHH28_RS02970 19aaa6179bc02fb32c3b56825d94e6d9 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 417 434 2.5E-63 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CHH28_RS02970 19aaa6179bc02fb32c3b56825d94e6d9 526 Pfam PF01019 Gamma-glutamyltranspeptidase 2 512 8.4E-165 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CHH28_RS09045 4158b7ac042b372a99f6262ca5fd2669 172 Pfam PF03473 MOSC domain 59 160 8.2E-8 T 29-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CHH28_RS09045 4158b7ac042b372a99f6262ca5fd2669 172 SUPERFAMILY SSF50800 17 165 1.2E-33 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain CHH28_RS09045 4158b7ac042b372a99f6262ca5fd2669 172 Gene3D G3DSA:2.40.33.20 4 172 2.1E-29 T 29-03-2018 CHH28_RS11215 2bce9bc8b72441354c01db1b267421f6 268 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 263 17.46 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CHH28_RS11215 2bce9bc8b72441354c01db1b267421f6 268 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 256 8.1E-68 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CHH28_RS11215 2bce9bc8b72441354c01db1b267421f6 268 Pfam PF02673 Bacitracin resistance protein BacA 6 258 6.5E-82 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CHH28_RS04435 7756a6633f73fa2088ab15eed45258f9 440 Pfam PF03553 Na+/H+ antiporter family 150 434 6.5E-66 T 29-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CHH28_RS04435 7756a6633f73fa2088ab15eed45258f9 440 Pfam PF13726 Na+-H+ antiporter family 2 88 3.6E-32 T 29-03-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal CHH28_RS02650 25513cc69b73615a36a7b06efa9e0c40 298 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 287 6.0E-54 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CHH28_RS02650 25513cc69b73615a36a7b06efa9e0c40 298 SUPERFAMILY SSF54506 1 296 7.38E-59 T 29-03-2018 CHH28_RS02650 25513cc69b73615a36a7b06efa9e0c40 298 PIRSF PIRSF016184 1 298 1.0E-64 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CHH28_RS02650 25513cc69b73615a36a7b06efa9e0c40 298 Gene3D G3DSA:3.10.310.10 135 287 7.6E-27 T 29-03-2018 CHH28_RS02650 25513cc69b73615a36a7b06efa9e0c40 298 Pfam PF02567 Phenazine biosynthesis-like protein 26 287 1.4E-49 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CHH28_RS02650 25513cc69b73615a36a7b06efa9e0c40 298 Gene3D G3DSA:3.10.310.10 1 134 2.0E-28 T 29-03-2018 CHH28_RS08985 8fa9ed7252adbc5289035e53599590f5 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 111 2.4E-18 T 29-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CHH28_RS08985 8fa9ed7252adbc5289035e53599590f5 131 Gene3D G3DSA:3.90.1590.10 1 129 2.2E-29 T 29-03-2018 CHH28_RS08985 8fa9ed7252adbc5289035e53599590f5 131 SUPERFAMILY SSF51316 1 131 2.09E-37 T 29-03-2018 IPR011057 Mss4-like CHH28_RS06225 05cfb2f10e4b7dec2d83808c2893492f 456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 336 453 4.7E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS06225 05cfb2f10e4b7dec2d83808c2893492f 456 SMART SM00388 227 291 4.1E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS06225 05cfb2f10e4b7dec2d83808c2893492f 456 Gene3D G3DSA:3.30.565.10 286 454 1.3E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS06225 05cfb2f10e4b7dec2d83808c2893492f 456 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 289 1.7E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS06225 05cfb2f10e4b7dec2d83808c2893492f 456 SUPERFAMILY SSF55874 281 452 6.42E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS06225 05cfb2f10e4b7dec2d83808c2893492f 456 Gene3D G3DSA:1.10.287.130 217 285 6.5E-13 T 29-03-2018 CHH28_RS06225 05cfb2f10e4b7dec2d83808c2893492f 456 SUPERFAMILY SSF158472 172 223 6.54E-9 T 29-03-2018 CHH28_RS06225 05cfb2f10e4b7dec2d83808c2893492f 456 Pfam PF00672 HAMP domain 172 221 1.5E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS06225 05cfb2f10e4b7dec2d83808c2893492f 456 SMART SM00387 335 454 2.2E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS06225 05cfb2f10e4b7dec2d83808c2893492f 456 SMART SM00304 171 226 9.2E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CHH28_RS06225 05cfb2f10e4b7dec2d83808c2893492f 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 3.3E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS06225 05cfb2f10e4b7dec2d83808c2893492f 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 432 3.3E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS06225 05cfb2f10e4b7dec2d83808c2893492f 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 451 3.3E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CHH28_RS06225 05cfb2f10e4b7dec2d83808c2893492f 456 SUPERFAMILY SSF47384 210 291 6.47E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CHH28_RS12365 8e47fc5ef5a0ee05b6b9fb202cc288a1 450 Gene3D G3DSA:3.40.720.10 105 391 1.8E-5 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CHH28_RS12365 8e47fc5ef5a0ee05b6b9fb202cc288a1 450 Pfam PF07394 Protein of unknown function (DUF1501) 35 394 1.0E-27 T 29-03-2018 IPR010869 Protein of unknown function DUF1501 CHH28_RS03175 e916169c6be9b160ce1271b3478e8e08 312 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 7 310 40.862 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CHH28_RS03175 e916169c6be9b160ce1271b3478e8e08 312 PIRSF PIRSF026649 6 307 2.6E-95 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CHH28_RS03175 e916169c6be9b160ce1271b3478e8e08 312 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 298 1.1E-76 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CHH28_RS03175 e916169c6be9b160ce1271b3478e8e08 312 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 12 305 6.2E-97 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CHH28_RS19090 16c771395f9f62736777387d2ca10af0 183 SUPERFAMILY SSF54637 42 171 4.37E-24 T 29-03-2018 IPR029069 HotDog domain CHH28_RS19090 16c771395f9f62736777387d2ca10af0 183 Gene3D G3DSA:3.10.129.10 28 173 2.3E-22 T 29-03-2018 CHH28_RS19090 16c771395f9f62736777387d2ca10af0 183 Pfam PF03061 Thioesterase superfamily 82 156 9.4E-11 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CHH28_RS19615 74ede0b1d66986a17655e6e241abfb96 82 Gene3D G3DSA:1.10.287.1060 3 76 4.8E-4 T 29-03-2018 CHH28_RS19615 74ede0b1d66986a17655e6e241abfb96 82 Pfam PF14357 Domain of unknown function (DUF4404) 6 82 2.0E-20 T 29-03-2018 IPR025516 Protein of unknown function DUF4404 CHH28_RS15245 e0ec0e471c6a06ce90751d2833e1d050 430 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 424 4.6E-94 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CHH28_RS15245 e0ec0e471c6a06ce90751d2833e1d050 430 PIRSF PIRSF006066 1 429 8.4E-66 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 CHH28_RS15245 e0ec0e471c6a06ce90751d2833e1d050 430 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 425 4.4E-101 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 CHH28_RS01610 43655ce89133bc1afd8eb19c3aa22506 130 Pfam PF03334 Na+/H+ antiporter subunit 12 92 1.0E-27 T 29-03-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 CHH28_RS01610 43655ce89133bc1afd8eb19c3aa22506 130 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 99 1.0E-29 T 29-03-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 CHH28_RS13340 9b3889fbfd47aee0d715526dfa5ecd18 1037 Gene3D G3DSA:3.40.50.300 259 511 1.2E-27 T 29-03-2018 CHH28_RS13340 9b3889fbfd47aee0d715526dfa5ecd18 1037 SUPERFAMILY SSF52540 250 442 1.73E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS13340 9b3889fbfd47aee0d715526dfa5ecd18 1037 SUPERFAMILY SSF52540 489 547 1.73E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS13340 9b3889fbfd47aee0d715526dfa5ecd18 1037 Pfam PF00270 DEAD/DEAH box helicase 305 464 1.8E-11 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CHH28_RS13340 9b3889fbfd47aee0d715526dfa5ecd18 1037 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 114 210 1.7E-14 T 29-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 CHH28_RS13340 9b3889fbfd47aee0d715526dfa5ecd18 1037 SMART SM00487 280 523 1.9E-12 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CHH28_RS00720 faceba831b05769b67c316455f10fb45 337 PIRSF PIRSF017020 5 337 3.0E-129 T 29-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CHH28_RS00720 faceba831b05769b67c316455f10fb45 337 SUPERFAMILY SSF53187 11 332 2.92E-79 T 29-03-2018 CHH28_RS00720 faceba831b05769b67c316455f10fb45 337 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 11 332 2.6E-105 T 29-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CHH28_RS00720 faceba831b05769b67c316455f10fb45 337 Gene3D G3DSA:3.40.630.10 47 331 3.9E-25 T 29-03-2018 CHH28_RS00720 faceba831b05769b67c316455f10fb45 337 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 52 334 1.9E-59 T 29-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 CHH28_RS00720 faceba831b05769b67c316455f10fb45 337 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 337 139.011 T 29-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CHH28_RS08185 4c9d0189fadbcd4d6022d58264a1ccdb 289 SUPERFAMILY SSF53335 60 246 1.31E-13 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS08185 4c9d0189fadbcd4d6022d58264a1ccdb 289 Gene3D G3DSA:3.40.50.150 17 283 1.7E-18 T 29-03-2018 CHH28_RS08185 4c9d0189fadbcd4d6022d58264a1ccdb 289 PIRSF PIRSF031679 1 279 1.6E-98 T 29-03-2018 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted CHH28_RS04865 a3873cc1497f3905b737798814d85b09 201 Pfam PF13036 Peptidoglycan-synthase activator LpoB 47 190 4.2E-42 T 29-03-2018 IPR014094 Penicillin-binding protein activator LpoB CHH28_RS04865 a3873cc1497f3905b737798814d85b09 201 Gene3D G3DSA:3.40.50.10070 67 198 1.3E-9 T 29-03-2018 CHH28_RS18110 6bc8a7a1c6659a1d7af3df0c2c20a129 401 Gene3D G3DSA:3.40.50.150 172 386 0.027 T 29-03-2018 CHH28_RS18110 6bc8a7a1c6659a1d7af3df0c2c20a129 401 SUPERFAMILY SSF53335 5 117 1.26E-8 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS18110 6bc8a7a1c6659a1d7af3df0c2c20a129 401 Gene3D G3DSA:3.40.50.150 1 114 1.7E-8 T 29-03-2018 CHH28_RS12785 c2af1c71070e028c3412935a3fac854c 67 SUPERFAMILY SSF54285 1 67 8.14E-12 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CHH28_RS12785 c2af1c71070e028c3412935a3fac854c 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 67 3.7E-14 T 29-03-2018 IPR010035 ThiS, thiamine-biosynthesis CHH28_RS12785 c2af1c71070e028c3412935a3fac854c 67 Pfam PF02597 ThiS family 10 67 3.5E-12 T 29-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CHH28_RS12785 c2af1c71070e028c3412935a3fac854c 67 Gene3D G3DSA:3.10.20.30 1 67 1.9E-15 T 29-03-2018 IPR012675 Beta-grasp domain CHH28_RS03195 07e4ec3ab4df31aa56bdd35d14be04b6 442 Pfam PF02321 Outer membrane efflux protein 241 424 3.2E-33 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CHH28_RS03195 07e4ec3ab4df31aa56bdd35d14be04b6 442 Pfam PF02321 Outer membrane efflux protein 22 216 7.9E-25 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CHH28_RS03195 07e4ec3ab4df31aa56bdd35d14be04b6 442 Gene3D G3DSA:1.20.1600.10 13 430 7.9E-73 T 29-03-2018 CHH28_RS03195 07e4ec3ab4df31aa56bdd35d14be04b6 442 SUPERFAMILY SSF56954 1 429 3.53E-89 T 29-03-2018 CHH28_RS03195 07e4ec3ab4df31aa56bdd35d14be04b6 442 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 18 439 4.4E-99 T 29-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CHH28_RS10800 4f1bfa12584478ad4fb755a5bdbdc0de 181 Gene3D G3DSA:1.10.357.10 19 160 2.6E-4 T 29-03-2018 CHH28_RS18025 787b7bb091a17a0ac8e827e1cf07d6cd 209 Gene3D G3DSA:1.20.5.320 9 121 9.6E-4 T 29-03-2018 CHH28_RS06570 a0b2e6c57ae9a6d4a3688bb20ba0f5fe 353 Pfam PF05987 Bacterial protein of unknown function (DUF898) 14 342 2.6E-92 T 29-03-2018 IPR010295 Protein of unknown function DUF898 CHH28_RS14575 3d1e33587e3d7787635555f2aa86b824 203 Gene3D G3DSA:2.30.110.20 23 187 1.9E-35 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CHH28_RS14575 3d1e33587e3d7787635555f2aa86b824 203 SUPERFAMILY SSF141452 54 194 1.57E-24 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CHH28_RS14575 3d1e33587e3d7787635555f2aa86b824 203 Pfam PF05638 Type VI secretion system effector, Hcp 56 171 9.2E-17 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CHH28_RS17055 370af4272ab19d7b77f683725fa9abac 97 Gene3D G3DSA:1.10.10.10 1 94 3.9E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17055 370af4272ab19d7b77f683725fa9abac 97 SUPERFAMILY SSF46785 2 94 7.74E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17055 370af4272ab19d7b77f683725fa9abac 97 Pfam PF12840 Helix-turn-helix domain 8 76 8.8E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17055 370af4272ab19d7b77f683725fa9abac 97 SMART SM00418 8 95 2.3E-8 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CHH28_RS10890 0891513b8d43044bf119cfbf4ccb2e1d 112 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 107 6.9E-8 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CHH28_RS10890 0891513b8d43044bf119cfbf4ccb2e1d 112 Gene3D G3DSA:3.10.180.10 1 112 3.8E-19 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS10890 0891513b8d43044bf119cfbf4ccb2e1d 112 SUPERFAMILY SSF54593 1 110 5.78E-22 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS08380 3994e73120cbfabf109e4e9d235d403d 540 SUPERFAMILY SSF56024 342 526 4.45E-20 T 29-03-2018 CHH28_RS08380 3994e73120cbfabf109e4e9d235d403d 540 SUPERFAMILY SSF56024 51 261 2.67E-21 T 29-03-2018 CHH28_RS08380 3994e73120cbfabf109e4e9d235d403d 540 Gene3D G3DSA:3.30.870.10 71 276 8.8E-17 T 29-03-2018 CHH28_RS08380 3994e73120cbfabf109e4e9d235d403d 540 Pfam PF13091 PLD-like domain 351 520 9.2E-8 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CHH28_RS08380 3994e73120cbfabf109e4e9d235d403d 540 SMART SM00155 192 219 8.1E-4 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CHH28_RS08380 3994e73120cbfabf109e4e9d235d403d 540 SMART SM00155 470 497 0.0019 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CHH28_RS08380 3994e73120cbfabf109e4e9d235d403d 540 Gene3D G3DSA:3.30.870.10 282 540 4.9E-24 T 29-03-2018 CHH28_RS07460 01ce75db50abf0292179a4ca94f2e661 230 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 102 198 2.4E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS07460 01ce75db50abf0292179a4ca94f2e661 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 198 5.8E-33 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS07460 01ce75db50abf0292179a4ca94f2e661 230 SUPERFAMILY SSF56784 11 226 8.79E-43 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS07460 01ce75db50abf0292179a4ca94f2e661 230 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 113 193 3.9E-15 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS07460 01ce75db50abf0292179a4ca94f2e661 230 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 102 198 1.2E-13 T 29-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CHH28_RS07460 01ce75db50abf0292179a4ca94f2e661 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 111 124 1.0E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS07460 01ce75db50abf0292179a4ca94f2e661 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 1.0E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS07460 01ce75db50abf0292179a4ca94f2e661 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 160 180 1.0E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS07460 01ce75db50abf0292179a4ca94f2e661 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 142 158 1.0E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS07460 01ce75db50abf0292179a4ca94f2e661 230 Gene3D G3DSA:3.40.50.1000 2 222 3.7E-35 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS12625 e246aa62278e091429886ccdcc00a002 108 SUPERFAMILY SSF64307 30 106 1.57E-21 T 29-03-2018 IPR001455 TusA-like domain CHH28_RS12625 e246aa62278e091429886ccdcc00a002 108 Gene3D G3DSA:3.30.110.40 29 107 7.8E-24 T 29-03-2018 IPR001455 TusA-like domain CHH28_RS12625 e246aa62278e091429886ccdcc00a002 108 Pfam PF01206 Sulfurtransferase TusA 38 106 1.1E-18 T 29-03-2018 IPR001455 TusA-like domain CHH28_RS16175 1b42c42f96f681f4d520b8e8fd11c1a9 281 SUPERFAMILY SSF53335 8 255 2.34E-37 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS16175 1b42c42f96f681f4d520b8e8fd11c1a9 281 Pfam PF13649 Methyltransferase domain 93 172 1.1E-12 T 29-03-2018 CHH28_RS16175 1b42c42f96f681f4d520b8e8fd11c1a9 281 Gene3D G3DSA:3.40.50.150 4 273 2.6E-44 T 29-03-2018 CHH28_RS16175 1b42c42f96f681f4d520b8e8fd11c1a9 281 PIRSF PIRSF018249 1 272 5.2E-73 T 29-03-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 CHH28_RS06210 bc24cbda482769f841f81928fc6c70d6 139 Pfam PF00571 CBS domain 84 132 1.5E-7 T 29-03-2018 IPR000644 CBS domain CHH28_RS06210 bc24cbda482769f841f81928fc6c70d6 139 Pfam PF00571 CBS domain 4 55 6.0E-14 T 29-03-2018 IPR000644 CBS domain CHH28_RS06210 bc24cbda482769f841f81928fc6c70d6 139 Gene3D G3DSA:3.10.580.10 2 137 2.0E-25 T 29-03-2018 CHH28_RS06210 bc24cbda482769f841f81928fc6c70d6 139 SMART SM00116 86 135 0.074 T 29-03-2018 IPR000644 CBS domain CHH28_RS06210 bc24cbda482769f841f81928fc6c70d6 139 SMART SM00116 11 59 3.9E-6 T 29-03-2018 IPR000644 CBS domain CHH28_RS06210 bc24cbda482769f841f81928fc6c70d6 139 SUPERFAMILY SSF54631 3 131 3.54E-24 T 29-03-2018 CHH28_RS08025 7e64328556b348db82810ae35c5f418d 175 SUPERFAMILY SSF50324 3 174 2.35E-68 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CHH28_RS08025 7e64328556b348db82810ae35c5f418d 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CHH28_RS08025 7e64328556b348db82810ae35c5f418d 175 Gene3D G3DSA:3.90.80.10 1 175 7.4E-54 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CHH28_RS08025 7e64328556b348db82810ae35c5f418d 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.674 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CHH28_RS08025 7e64328556b348db82810ae35c5f418d 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 8.8E-55 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CHH28_RS13190 d867e32a426b4e8c6d3b9640da4070e8 319 SUPERFAMILY SSF69593 19 297 7.06E-34 T 29-03-2018 CHH28_RS13190 d867e32a426b4e8c6d3b9640da4070e8 319 Gene3D G3DSA:3.40.1130.10 47 241 1.2E-21 T 29-03-2018 CHH28_RS13190 d867e32a426b4e8c6d3b9640da4070e8 319 SMART SM00563 92 234 3.0E-16 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CHH28_RS13190 d867e32a426b4e8c6d3b9640da4070e8 319 Pfam PF01553 Acyltransferase 79 232 6.4E-14 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CHH28_RS13380 5d8597dd641f73cbaf6b434e1bcc333d 291 Gene3D G3DSA:3.40.190.10 4 180 1.6E-5 T 29-03-2018 CHH28_RS03630 0abd07b68a7cb6deca1e8da51115ccc1 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 115 1.6E-8 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CHH28_RS03630 0abd07b68a7cb6deca1e8da51115ccc1 120 Gene3D G3DSA:3.10.180.10 1 120 1.8E-16 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS03630 0abd07b68a7cb6deca1e8da51115ccc1 120 SUPERFAMILY SSF54593 2 119 1.78E-20 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS06060 91b3986fe19487eb2d537098a9093f46 88 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 9 79 8.0E-26 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06060 91b3986fe19487eb2d537098a9093f46 88 PRINTS PR00973 Ribosomal protein S17 family signature 59 69 6.3E-12 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06060 91b3986fe19487eb2d537098a9093f46 88 PRINTS PR00973 Ribosomal protein S17 family signature 69 76 6.3E-12 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06060 91b3986fe19487eb2d537098a9093f46 88 PRINTS PR00973 Ribosomal protein S17 family signature 27 50 6.3E-12 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06060 91b3986fe19487eb2d537098a9093f46 88 Pfam PF00366 Ribosomal protein S17 13 79 1.1E-31 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06060 91b3986fe19487eb2d537098a9093f46 88 Gene3D G3DSA:2.40.50.140 8 85 9.2E-31 T 29-03-2018 CHH28_RS06060 91b3986fe19487eb2d537098a9093f46 88 ProSitePatterns PS00056 Ribosomal protein S17 signature. 59 71 - T 29-03-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06060 91b3986fe19487eb2d537098a9093f46 88 SUPERFAMILY SSF50249 9 85 1.2E-30 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CHH28_RS06060 91b3986fe19487eb2d537098a9093f46 88 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 8 83 23.59 T 29-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06060 91b3986fe19487eb2d537098a9093f46 88 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 9 79 4.2E-35 T 29-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS08890 f576edfab95756c123c617e1d912fe99 138 Gene3D G3DSA:3.90.70.10 7 136 8.4E-5 T 29-03-2018 CHH28_RS01745 f3314dffaaffe54facfbfe038a525940 175 Pfam PF13689 Domain of unknown function (DUF4154) 34 166 1.3E-18 T 29-03-2018 IPR025293 Protein of unknown function DUF4154 CHH28_RS19565 9446a5c2ecd68abac68d83ede69a26d7 366 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 365 2.3E-129 T 29-03-2018 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CHH28_RS19565 9446a5c2ecd68abac68d83ede69a26d7 366 Pfam PF01098 Cell cycle protein 22 364 2.3E-107 T 29-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 CHH28_RS19565 9446a5c2ecd68abac68d83ede69a26d7 366 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 322 346 - T 29-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CHH28_RS12020 1a3764ad653f271e59d00827139bdab8 220 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 191 1.6E-58 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CHH28_RS12020 1a3764ad653f271e59d00827139bdab8 220 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 204 1.6E-98 T 29-03-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 CHH28_RS12020 1a3764ad653f271e59d00827139bdab8 220 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 1 204 35.204 T 29-03-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 CHH28_RS12020 1a3764ad653f271e59d00827139bdab8 220 PIRSF PIRSF006102 1 209 2.2E-65 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CHH28_RS04050 ad4ed4aef88ade1ec78e581d138824a2 257 Gene3D G3DSA:1.20.1300.10 42 157 2.9E-4 T 29-03-2018 CHH28_RS15155 84a1c7da81f62524cd4600873493adde 354 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 352 2.8E-123 T 29-03-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 CHH28_RS15155 84a1c7da81f62524cd4600873493adde 354 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 352 5.7E-60 T 29-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CHH28_RS19665 4f3b9329701cb6c3b5bae95629c4adb9 367 SUPERFAMILY SSF46689 316 365 5.38E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS19665 4f3b9329701cb6c3b5bae95629c4adb9 367 Pfam PF12833 Helix-turn-helix domain 288 364 2.4E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS19665 4f3b9329701cb6c3b5bae95629c4adb9 367 Gene3D G3DSA:1.10.10.60 230 318 0.18 T 29-03-2018 CHH28_RS19665 4f3b9329701cb6c3b5bae95629c4adb9 367 SMART SM00342 281 363 1.1E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS19665 4f3b9329701cb6c3b5bae95629c4adb9 367 Gene3D G3DSA:1.10.10.60 319 367 6.0E-13 T 29-03-2018 CHH28_RS19665 4f3b9329701cb6c3b5bae95629c4adb9 367 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 55 236 1.3E-48 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS06855 b3e51dbda654cbd15e64ad885374f217 252 Pfam PF01618 MotA/TolQ/ExbB proton channel family 98 211 3.0E-22 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CHH28_RS06855 b3e51dbda654cbd15e64ad885374f217 252 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 29-03-2018 IPR000540 Flagellar motor protein MotA, conserved site CHH28_RS18770 78133d2f3fa56a5940447e5ec4f47977 101 SUPERFAMILY SSF52091 8 100 1.12E-21 T 29-03-2018 IPR002645 STAS domain CHH28_RS18770 78133d2f3fa56a5940447e5ec4f47977 101 Gene3D G3DSA:3.30.750.24 1 101 2.1E-16 T 29-03-2018 IPR002645 STAS domain CHH28_RS18770 78133d2f3fa56a5940447e5ec4f47977 101 Pfam PF13466 STAS domain 16 94 3.0E-12 T 29-03-2018 IPR002645 STAS domain CHH28_RS01510 15110d13e6846f2008f3dfecd73116b4 163 Pfam PF11304 Protein of unknown function (DUF3106) 49 150 1.4E-23 T 29-03-2018 IPR021455 Protein of unknown function DUF3106 CHH28_RS12965 712dabfc1e7e7f1108ce237a34df9b0d 165 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 48 140 2.0E-8 T 29-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CHH28_RS12725 2912efbe5807b0ae13561721d3c89efb 272 Gene3D G3DSA:3.30.980.20 94 182 1.8E-30 T 29-03-2018 CHH28_RS12725 2912efbe5807b0ae13561721d3c89efb 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 228 3.7E-21 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CHH28_RS12725 2912efbe5807b0ae13561721d3c89efb 272 TIGRFAM TIGR01486 HAD-SF-IIB-MPGP: mannosyl-3-phosphoglycerate phosphatase family 7 258 1.2E-66 T 29-03-2018 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 CHH28_RS12725 2912efbe5807b0ae13561721d3c89efb 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 229 1.7E-15 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS12725 2912efbe5807b0ae13561721d3c89efb 272 SUPERFAMILY SSF56784 6 229 9.83E-39 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS19490 2b36c1a03f6f3beb96802f88b91b3ae6 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 57 68 8.3E-16 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CHH28_RS19490 2b36c1a03f6f3beb96802f88b91b3ae6 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 137 150 8.3E-16 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CHH28_RS19490 2b36c1a03f6f3beb96802f88b91b3ae6 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 110 127 8.3E-16 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CHH28_RS19490 2b36c1a03f6f3beb96802f88b91b3ae6 385 SUPERFAMILY SSF69189 273 365 9.42E-23 T 29-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CHH28_RS19490 2b36c1a03f6f3beb96802f88b91b3ae6 385 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 25 253 2.7E-78 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CHH28_RS19490 2b36c1a03f6f3beb96802f88b91b3ae6 385 SMART SM00936 273 363 1.9E-30 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CHH28_RS19490 2b36c1a03f6f3beb96802f88b91b3ae6 385 Gene3D G3DSA:2.60.410.10 274 363 6.4E-22 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CHH28_RS19490 2b36c1a03f6f3beb96802f88b91b3ae6 385 Gene3D G3DSA:3.40.710.10 20 273 4.4E-52 T 29-03-2018 CHH28_RS19490 2b36c1a03f6f3beb96802f88b91b3ae6 385 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 273 362 4.9E-23 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CHH28_RS19490 2b36c1a03f6f3beb96802f88b91b3ae6 385 SUPERFAMILY SSF56601 3 272 1.55E-81 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS07200 f6c77ef510206c70d9ebe668e61d2c4e 343 Gene3D G3DSA:1.10.575.10 18 343 1.0E-16 T 29-03-2018 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 CHH28_RS07200 f6c77ef510206c70d9ebe668e61d2c4e 343 SUPERFAMILY SSF48537 194 273 5.07E-8 T 29-03-2018 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 CHH28_RS04950 a4b522119e35b895057e91786d494039 210 Pfam PF01323 DSBA-like thioredoxin domain 87 185 1.7E-11 T 29-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 CHH28_RS04950 a4b522119e35b895057e91786d494039 210 Gene3D G3DSA:3.40.30.10 21 209 6.4E-36 T 29-03-2018 CHH28_RS04950 a4b522119e35b895057e91786d494039 210 SUPERFAMILY SSF52833 24 203 1.97E-39 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS04950 a4b522119e35b895057e91786d494039 210 PIRSF PIRSF001488 5 209 1.0E-54 T 29-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CHH28_RS16085 29164a5d4a6425840f1fcc95c52a0e1a 452 Pfam PF07670 Nucleoside recognition 138 232 1.1E-7 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CHH28_RS03575 b35a5bec84ac589134a693fc0e9ff0ad 193 SUPERFAMILY SSF55729 8 178 1.1E-48 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS03575 b35a5bec84ac589134a693fc0e9ff0ad 193 Gene3D G3DSA:3.40.630.30 2 186 1.6E-33 T 29-03-2018 CHH28_RS03575 b35a5bec84ac589134a693fc0e9ff0ad 193 Pfam PF13302 Acetyltransferase (GNAT) domain 14 153 2.2E-32 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS13420 4d200946a702cc136ad33ee127ba7ec2 306 Gene3D G3DSA:3.40.50.300 5 171 2.2E-27 T 29-03-2018 CHH28_RS13420 4d200946a702cc136ad33ee127ba7ec2 306 Gene3D G3DSA:1.10.8.300 187 303 1.2E-34 T 29-03-2018 CHH28_RS13420 4d200946a702cc136ad33ee127ba7ec2 306 PIRSF PIRSF002849 1 306 5.3E-127 T 29-03-2018 CHH28_RS13420 4d200946a702cc136ad33ee127ba7ec2 306 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 24 154 1.8E-64 T 29-03-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 CHH28_RS13420 4d200946a702cc136ad33ee127ba7ec2 306 SUPERFAMILY SSF52540 3 278 1.64E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS14530 1c92fd92a1caf05e2c14334298886623 342 Gene3D G3DSA:1.20.5.340 46 180 0.053 T 29-03-2018 CHH28_RS14530 1c92fd92a1caf05e2c14334298886623 342 Pfam PF11740 Plasmid replication region DNA-binding N-term 7 112 4.6E-25 T 29-03-2018 IPR021104 KfrA, N-terminal DNA-binding domain CHH28_RS14530 1c92fd92a1caf05e2c14334298886623 342 Gene3D G3DSA:1.10.287.620 181 338 5.2E-4 T 29-03-2018 CHH28_RS19600 ac88dabcf694ca930960d7734d026ab0 382 Pfam PF13439 Glycosyltransferase Family 4 17 182 5.0E-22 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CHH28_RS19600 ac88dabcf694ca930960d7734d026ab0 382 SUPERFAMILY SSF53756 6 368 2.17E-77 T 29-03-2018 CHH28_RS19600 ac88dabcf694ca930960d7734d026ab0 382 Gene3D G3DSA:3.40.50.2000 5 191 2.8E-12 T 29-03-2018 CHH28_RS19600 ac88dabcf694ca930960d7734d026ab0 382 Pfam PF00534 Glycosyl transferases group 1 197 343 5.2E-30 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CHH28_RS19600 ac88dabcf694ca930960d7734d026ab0 382 Gene3D G3DSA:3.40.50.2000 192 349 4.6E-43 T 29-03-2018 CHH28_RS09070 29c2852aae9eaf2094345c78d275698b 736 Gene3D G3DSA:3.30.365.10 420 602 2.2E-42 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CHH28_RS09070 29c2852aae9eaf2094345c78d275698b 736 Gene3D G3DSA:3.30.365.10 603 736 2.0E-30 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CHH28_RS09070 29c2852aae9eaf2094345c78d275698b 736 SMART SM01008 206 288 2.6E-13 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CHH28_RS09070 29c2852aae9eaf2094345c78d275698b 736 Gene3D G3DSA:3.90.1170.50 183 325 4.2E-33 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CHH28_RS09070 29c2852aae9eaf2094345c78d275698b 736 Gene3D G3DSA:3.30.365.10 28 182 1.2E-36 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CHH28_RS09070 29c2852aae9eaf2094345c78d275698b 736 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 27 0.0014 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CHH28_RS09070 29c2852aae9eaf2094345c78d275698b 736 Gene3D G3DSA:3.30.365.10 326 419 1.2E-27 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CHH28_RS09070 29c2852aae9eaf2094345c78d275698b 736 SUPERFAMILY SSF56003 506 733 5.23E-107 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CHH28_RS09070 29c2852aae9eaf2094345c78d275698b 736 SUPERFAMILY SSF56003 312 462 5.23E-107 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CHH28_RS09070 29c2852aae9eaf2094345c78d275698b 736 PIRSF PIRSF036389 1 736 1.8E-235 T 29-03-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related CHH28_RS09070 29c2852aae9eaf2094345c78d275698b 736 SUPERFAMILY SSF56003 31 239 2.3E-37 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CHH28_RS09070 29c2852aae9eaf2094345c78d275698b 736 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 36 178 2.7E-14 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CHH28_RS09070 29c2852aae9eaf2094345c78d275698b 736 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 611 687 8.4E-12 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CHH28_RS09070 29c2852aae9eaf2094345c78d275698b 736 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 314 459 3.2E-24 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CHH28_RS09270 5c1d2179d0cdcf7215acdbe5d43034ab 275 Pfam PF00700 Bacterial flagellin C-terminal helical region 191 274 2.2E-15 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CHH28_RS09270 5c1d2179d0cdcf7215acdbe5d43034ab 275 Gene3D G3DSA:1.20.1330.10 41 247 6.3E-48 T 29-03-2018 CHH28_RS09270 5c1d2179d0cdcf7215acdbe5d43034ab 275 SUPERFAMILY SSF64518 23 274 7.98E-56 T 29-03-2018 CHH28_RS09270 5c1d2179d0cdcf7215acdbe5d43034ab 275 Pfam PF00669 Bacterial flagellin N-terminal helical region 21 142 1.2E-26 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CHH28_RS09270 5c1d2179d0cdcf7215acdbe5d43034ab 275 PRINTS PR00207 Flagellin signature 38 55 1.7E-17 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CHH28_RS09270 5c1d2179d0cdcf7215acdbe5d43034ab 275 PRINTS PR00207 Flagellin signature 77 96 1.7E-17 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CHH28_RS09270 5c1d2179d0cdcf7215acdbe5d43034ab 275 PRINTS PR00207 Flagellin signature 112 135 1.7E-17 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CHH28_RS00105 8d44049d38da5b17ba42e27c7b82b0b7 444 Gene3D G3DSA:1.25.40.10 89 442 6.4E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS10795 01455697c31d8f3c55fa1cf118e4e242 434 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 221 357 2.0E-18 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CHH28_RS10795 01455697c31d8f3c55fa1cf118e4e242 434 SMART SM00644 210 357 0.0015 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CHH28_RS10795 01455697c31d8f3c55fa1cf118e4e242 434 Gene3D G3DSA:3.40.80.10 208 379 1.9E-27 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CHH28_RS10795 01455697c31d8f3c55fa1cf118e4e242 434 SUPERFAMILY SSF55846 216 373 7.2E-25 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CHH28_RS10795 01455697c31d8f3c55fa1cf118e4e242 434 SMART SM00701 209 343 0.0028 T 29-03-2018 IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria GO:0008270|GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CHH28_RS01550 71ee960215a2dcb5b0a71c02155cc03b 281 SUPERFAMILY SSF52833 38 129 1.48E-16 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS01550 71ee960215a2dcb5b0a71c02155cc03b 281 SUPERFAMILY SSF47616 180 258 2.46E-31 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CHH28_RS01550 71ee960215a2dcb5b0a71c02155cc03b 281 SUPERFAMILY SSF47616 116 151 2.46E-31 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CHH28_RS01550 71ee960215a2dcb5b0a71c02155cc03b 281 Pfam PF00043 Glutathione S-transferase, C-terminal domain 181 249 2.8E-10 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CHH28_RS01550 71ee960215a2dcb5b0a71c02155cc03b 281 Gene3D G3DSA:3.40.30.10 44 145 2.8E-22 T 29-03-2018 CHH28_RS01550 71ee960215a2dcb5b0a71c02155cc03b 281 Gene3D G3DSA:1.20.1050.10 146 281 5.0E-27 T 29-03-2018 CHH28_RS01550 71ee960215a2dcb5b0a71c02155cc03b 281 Pfam PF02798 Glutathione S-transferase, N-terminal domain 64 126 1.3E-6 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CHH28_RS10700 b2f9549e8d6c99b436ab266a3a2cd937 329 SUPERFAMILY SSF51735 1 305 1.24E-31 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS10700 b2f9549e8d6c99b436ab266a3a2cd937 329 Gene3D G3DSA:3.40.50.720 1 306 1.5E-25 T 29-03-2018 CHH28_RS10700 b2f9549e8d6c99b436ab266a3a2cd937 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 208 2.2E-5 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CHH28_RS13835 57e2de1c751f2ec8eb9bb5c833a756cf 189 Pfam PF16036 Chalcone isomerase-like 22 185 1.1E-51 T 29-03-2018 IPR016087 Chalcone isomerase GO:0016872 CHH28_RS13835 57e2de1c751f2ec8eb9bb5c833a756cf 189 Gene3D G3DSA:3.50.70.10 19 170 5.7E-22 T 29-03-2018 IPR016088 Chalcone isomerase, 3-layer sandwich GO:0009813|GO:0045430 CHH28_RS13835 57e2de1c751f2ec8eb9bb5c833a756cf 189 SUPERFAMILY SSF54626 23 185 1.31E-11 T 29-03-2018 IPR016087 Chalcone isomerase GO:0016872 CHH28_RS08995 51ef4c6716e15998f80c9bf3b4f1f05f 450 Pfam PF02515 CoA-transferase family III 196 401 1.0E-44 T 29-03-2018 IPR003673 CoA-transferase family III GO:0003824 CHH28_RS08995 51ef4c6716e15998f80c9bf3b4f1f05f 450 Gene3D G3DSA:3.40.50.10540 190 422 3.9E-61 T 29-03-2018 IPR023606 CoA-transferase family III domain CHH28_RS08995 51ef4c6716e15998f80c9bf3b4f1f05f 450 Gene3D G3DSA:3.30.1540.10 87 173 1.1E-5 T 29-03-2018 CHH28_RS08995 51ef4c6716e15998f80c9bf3b4f1f05f 450 SUPERFAMILY SSF89796 33 181 1.44E-15 T 29-03-2018 IPR023606 CoA-transferase family III domain CHH28_RS08995 51ef4c6716e15998f80c9bf3b4f1f05f 450 SUPERFAMILY SSF89796 194 392 4.84E-52 T 29-03-2018 IPR023606 CoA-transferase family III domain CHH28_RS11915 2e42da5d352cd737e3d5ea44cd69ffd1 102 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 6.4E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS11915 2e42da5d352cd737e3d5ea44cd69ffd1 102 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 6.4E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS11915 2e42da5d352cd737e3d5ea44cd69ffd1 102 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 6.4E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS11915 2e42da5d352cd737e3d5ea44cd69ffd1 102 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 2 98 30.17 T 29-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CHH28_RS11915 2e42da5d352cd737e3d5ea44cd69ffd1 102 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CHH28_RS11915 2e42da5d352cd737e3d5ea44cd69ffd1 102 Gene3D G3DSA:4.10.520.10 2 100 6.1E-32 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CHH28_RS11915 2e42da5d352cd737e3d5ea44cd69ffd1 102 SUPERFAMILY SSF47729 4 93 4.27E-31 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CHH28_RS11915 2e42da5d352cd737e3d5ea44cd69ffd1 102 SMART SM00411 4 93 2.5E-42 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS11915 2e42da5d352cd737e3d5ea44cd69ffd1 102 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 97 6.7E-50 T 29-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CHH28_RS11915 2e42da5d352cd737e3d5ea44cd69ffd1 102 Pfam PF00216 Bacterial DNA-binding protein 4 92 1.7E-30 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS10770 6d749dc3dbf9e0de75c830f66a732179 160 SUPERFAMILY SSF55729 36 141 5.74E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS10770 6d749dc3dbf9e0de75c830f66a732179 160 Pfam PF00583 Acetyltransferase (GNAT) family 56 141 4.8E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS10770 6d749dc3dbf9e0de75c830f66a732179 160 Gene3D G3DSA:3.40.630.30 1 151 5.2E-20 T 29-03-2018 CHH28_RS06705 5281126a76d2edfa8e898ef4935dcdbc 215 Pfam PF07826 IMP cyclohydrolase-like protein 2 200 1.2E-51 T 29-03-2018 IPR020600 Inosine monophosphate cyclohydrolase-like GO:0003937|GO:0006164|GO:0006188 KEGG: 00230+3.5.4.10|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CHH28_RS06705 5281126a76d2edfa8e898ef4935dcdbc 215 Gene3D G3DSA:3.60.20.20 2 201 1.2E-41 T 29-03-2018 IPR020600 Inosine monophosphate cyclohydrolase-like GO:0003937|GO:0006164|GO:0006188 KEGG: 00230+3.5.4.10|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CHH28_RS06705 5281126a76d2edfa8e898ef4935dcdbc 215 SUPERFAMILY SSF75569 1 204 7.98E-55 T 29-03-2018 IPR020600 Inosine monophosphate cyclohydrolase-like GO:0003937|GO:0006164|GO:0006188 KEGG: 00230+3.5.4.10|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CHH28_RS06705 5281126a76d2edfa8e898ef4935dcdbc 215 TIGRFAM TIGR01922 purO_arch: IMP cyclohydrolase 1 203 2.2E-58 T 29-03-2018 IPR010191 IMP cyclohydrolase GO:0003937|GO:0006164|GO:0006188 KEGG: 00230+3.5.4.10|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CHH28_RS06705 5281126a76d2edfa8e898ef4935dcdbc 215 Hamap MF_00705 IMP cyclohydrolase [purO]. 1 214 65.166 T 29-03-2018 IPR010191 IMP cyclohydrolase GO:0003937|GO:0006164|GO:0006188 KEGG: 00230+3.5.4.10|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CHH28_RS13200 eae88de82177b173d6bf35fe2334288f 241 Gene3D G3DSA:3.90.260.10 52 134 5.1E-4 T 29-03-2018 IPR002931 Transglutaminase-like CHH28_RS13200 eae88de82177b173d6bf35fe2334288f 241 SUPERFAMILY SSF54001 18 144 4.91E-19 T 29-03-2018 CHH28_RS13200 eae88de82177b173d6bf35fe2334288f 241 Pfam PF01841 Transglutaminase-like superfamily 31 132 5.4E-14 T 29-03-2018 IPR002931 Transglutaminase-like CHH28_RS14520 f045fcad02efffbfbef2f51d2857dff3 167 Gene3D G3DSA:3.30.1360.100 95 165 1.5E-15 T 29-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain CHH28_RS14520 f045fcad02efffbfbef2f51d2857dff3 167 Pfam PF04612 Type II secretion system (T2SS), protein M 17 165 1.3E-27 T 29-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 CHH28_RS14520 f045fcad02efffbfbef2f51d2857dff3 167 SUPERFAMILY SSF103054 95 166 4.18E-14 T 29-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain CHH28_RS15295 d7fd624f641e484f1860cd71e637664b 213 Pfam PF02589 LUD domain 36 206 1.1E-21 T 29-03-2018 IPR003741 LUD domain CHH28_RS15295 d7fd624f641e484f1860cd71e637664b 213 Gene3D G3DSA:3.40.50.10420 29 207 8.3E-32 T 29-03-2018 CHH28_RS15295 d7fd624f641e484f1860cd71e637664b 213 SUPERFAMILY SSF100950 35 206 1.13E-31 T 29-03-2018 CHH28_RS07500 92010ca7b5522994776dfe4c65192698 183 Pfam PF13302 Acetyltransferase (GNAT) domain 21 150 7.1E-21 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS07500 92010ca7b5522994776dfe4c65192698 183 SUPERFAMILY SSF55729 5 173 7.52E-40 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS07500 92010ca7b5522994776dfe4c65192698 183 Gene3D G3DSA:3.40.630.30 1 182 2.5E-28 T 29-03-2018 CHH28_RS16020 122630c58dce020181457f8d8814446e 294 Gene3D G3DSA:1.10.3720.10 47 291 4.2E-35 T 29-03-2018 CHH28_RS16020 122630c58dce020181457f8d8814446e 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 273 4.8E-27 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS16020 122630c58dce020181457f8d8814446e 294 SUPERFAMILY SSF161098 96 279 3.01E-39 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS00460 8ca1e9fc5f20e39fd58901d2d23f78d1 152 SUPERFAMILY SSF74942 83 150 1.11E-17 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CHH28_RS00460 8ca1e9fc5f20e39fd58901d2d23f78d1 152 SUPERFAMILY SSF75420 5 82 1.44E-24 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CHH28_RS00460 8ca1e9fc5f20e39fd58901d2d23f78d1 152 Gene3D G3DSA:2.30.30.180 87 147 5.3E-15 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CHH28_RS00460 8ca1e9fc5f20e39fd58901d2d23f78d1 152 Pfam PF17384 RimP C-terminal SH3 domain 85 150 4.9E-16 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CHH28_RS00460 8ca1e9fc5f20e39fd58901d2d23f78d1 152 Gene3D G3DSA:3.30.300.70 2 79 3.4E-28 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CHH28_RS00460 8ca1e9fc5f20e39fd58901d2d23f78d1 152 Pfam PF02576 RimP N-terminal domain 10 82 1.7E-27 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CHH28_RS00460 8ca1e9fc5f20e39fd58901d2d23f78d1 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 5 150 23.714 T 29-03-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 CHH28_RS10155 9edf153c85c646c21bd1bd88ad56af1c 78 Gene3D G3DSA:1.10.1220.10 20 77 5.9E-5 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CHH28_RS07030 e795101be942e03711b6a9337dcecb67 338 Pfam PF12224 Putative amidoligase enzyme 21 289 2.8E-70 T 29-03-2018 IPR022025 Putative amidoligase enzyme CHH28_RS17980 a169a2ca70fc699b35016baaba666992 372 Gene3D G3DSA:3.40.50.10330 2 178 1.1E-18 T 29-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 CHH28_RS17980 a169a2ca70fc699b35016baaba666992 372 PIRSF PIRSF016907 1 372 2.4E-117 T 29-03-2018 IPR011386 Putative ATP-NAD kinase CHH28_RS17980 a169a2ca70fc699b35016baaba666992 372 SUPERFAMILY SSF53784 93 139 6.67E-7 T 29-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CHH28_RS17980 a169a2ca70fc699b35016baaba666992 372 Pfam PF01513 ATP-NAD kinase 4 363 2.8E-38 T 29-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CHH28_RS06025 e521eae7d4905d5a530c627cb9f849ba 98 Pfam PF00276 Ribosomal protein L23 8 94 6.9E-32 T 29-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CHH28_RS06025 e521eae7d4905d5a530c627cb9f849ba 98 SUPERFAMILY SSF54189 1 92 6.47E-32 T 29-03-2018 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06025 e521eae7d4905d5a530c627cb9f849ba 98 Gene3D G3DSA:3.30.70.330 5 98 2.0E-32 T 29-03-2018 CHH28_RS06025 e521eae7d4905d5a530c627cb9f849ba 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 22.782 T 29-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CHH28_RS07405 f3a8c5944ab1c84132e2b42deea4fea2 511 Pfam PF03929 PepSY-associated TM region 11 359 1.6E-51 T 29-03-2018 IPR005625 PepSY-associated TM protein CHH28_RS10015 1e65c4ced81c454b0b1d37a7f87432f7 861 Pfam PF04411 PD-(D/E)XK nuclease superfamily 568 662 3.1E-7 T 29-03-2018 IPR007505 PD-(D/E)XK nuclease superfamily 7 CHH28_RS18265 b194ef7264fb56c4355ffb8ecf62c130 349 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 206 2.4E-35 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CHH28_RS18265 b194ef7264fb56c4355ffb8ecf62c130 349 Gene3D G3DSA:1.10.10.60 278 342 1.4E-14 T 29-03-2018 CHH28_RS18265 b194ef7264fb56c4355ffb8ecf62c130 349 Pfam PF12833 Helix-turn-helix domain 258 334 1.1E-13 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS18265 b194ef7264fb56c4355ffb8ecf62c130 349 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 317 333 9.1E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS18265 b194ef7264fb56c4355ffb8ecf62c130 349 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 302 317 9.1E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CHH28_RS18265 b194ef7264fb56c4355ffb8ecf62c130 349 SMART SM00342 251 333 5.3E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CHH28_RS18265 b194ef7264fb56c4355ffb8ecf62c130 349 SUPERFAMILY SSF46689 287 338 1.16E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS05440 fa892688ec44d48e3884cc3406d89a99 232 SUPERFAMILY SSF56784 3 229 4.14E-46 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS05440 fa892688ec44d48e3884cc3406d89a99 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 201 1.3E-20 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS05440 fa892688ec44d48e3884cc3406d89a99 232 Gene3D G3DSA:3.40.50.1000 1 51 0.23 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS05440 fa892688ec44d48e3884cc3406d89a99 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 78 195 9.8E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS05440 fa892688ec44d48e3884cc3406d89a99 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 70 201 9.2E-14 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS05440 fa892688ec44d48e3884cc3406d89a99 232 Gene3D G3DSA:3.40.50.1000 83 231 5.1E-29 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS07335 7e25e918c816f4286b13677c1b15b9c6 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 149 1.1E-10 T 29-03-2018 IPR002810 NfeD-like, C-terminal domain CHH28_RS07335 7e25e918c816f4286b13677c1b15b9c6 153 Gene3D G3DSA:2.40.50.140 69 153 1.6E-6 T 29-03-2018 CHH28_RS15120 90fa52fd5e2c86568fe7a3e85e7224fd 305 Pfam PF00582 Universal stress protein family 171 295 2.4E-19 T 29-03-2018 IPR006016 UspA GO:0006950 CHH28_RS15120 90fa52fd5e2c86568fe7a3e85e7224fd 305 Pfam PF00582 Universal stress protein family 5 142 1.2E-16 T 29-03-2018 IPR006016 UspA GO:0006950 CHH28_RS15120 90fa52fd5e2c86568fe7a3e85e7224fd 305 Gene3D G3DSA:3.40.50.620 151 299 2.2E-26 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS15120 90fa52fd5e2c86568fe7a3e85e7224fd 305 SUPERFAMILY SSF52402 3 144 4.02E-23 T 29-03-2018 CHH28_RS15120 90fa52fd5e2c86568fe7a3e85e7224fd 305 SUPERFAMILY SSF52402 150 298 6.53E-27 T 29-03-2018 CHH28_RS15120 90fa52fd5e2c86568fe7a3e85e7224fd 305 Gene3D G3DSA:3.40.50.620 3 150 5.8E-20 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS15120 90fa52fd5e2c86568fe7a3e85e7224fd 305 PRINTS PR01438 Universal stress protein signature 4 22 1.3E-9 T 29-03-2018 IPR006015 Universal stress protein A CHH28_RS15120 90fa52fd5e2c86568fe7a3e85e7224fd 305 PRINTS PR01438 Universal stress protein signature 273 295 1.3E-9 T 29-03-2018 IPR006015 Universal stress protein A CHH28_RS15120 90fa52fd5e2c86568fe7a3e85e7224fd 305 PRINTS PR01438 Universal stress protein signature 255 267 1.3E-9 T 29-03-2018 IPR006015 Universal stress protein A CHH28_RS13375 4f9d0751215b37714b3c3e58d3d9b555 134 Gene3D G3DSA:1.10.10.10 6 126 1.4E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS13375 4f9d0751215b37714b3c3e58d3d9b555 134 Pfam PF01051 Initiator Replication protein 13 120 6.0E-6 T 29-03-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 CHH28_RS13375 4f9d0751215b37714b3c3e58d3d9b555 134 SUPERFAMILY SSF46785 10 119 9.07E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17700 7fe7dc5c1009890d730d58df212e2d68 287 SUPERFAMILY SSF46785 85 161 6.53E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17700 7fe7dc5c1009890d730d58df212e2d68 287 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 7 175 1.6E-38 T 29-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CHH28_RS17700 7fe7dc5c1009890d730d58df212e2d68 287 SUPERFAMILY SSF46785 6 84 9.52E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17700 7fe7dc5c1009890d730d58df212e2d68 287 PIRSF PIRSF019345 213 273 36.0 T 29-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CHH28_RS17700 7fe7dc5c1009890d730d58df212e2d68 287 PIRSF PIRSF019345 2 207 8.6E-66 T 29-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CHH28_RS17700 7fe7dc5c1009890d730d58df212e2d68 287 Pfam PF04079 Segregation and condensation complex subunit ScpB 10 170 2.1E-53 T 29-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CHH28_RS17700 7fe7dc5c1009890d730d58df212e2d68 287 Gene3D G3DSA:1.10.10.10 87 178 9.1E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS17700 7fe7dc5c1009890d730d58df212e2d68 287 Gene3D G3DSA:1.10.10.10 2 86 1.6E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS07980 e39555140e271f970f9c4440a967ba26 282 Gene3D G3DSA:3.40.190.10 5 234 2.7E-5 T 29-03-2018 CHH28_RS12865 a9726b6d84252f26992a9334c92f53f2 209 PIRSF PIRSF006324 1 209 1.2E-50 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS12865 a9726b6d84252f26992a9334c92f53f2 209 Pfam PF01810 LysE type translocator 14 207 1.5E-30 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS19280 e70e4867ccbbf2d2691103cb85f172ad 99 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 27 95 9.6E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS19280 e70e4867ccbbf2d2691103cb85f172ad 99 PRINTS PR00607 Class IE cytochrome C signature 32 43 2.9E-8 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CHH28_RS19280 e70e4867ccbbf2d2691103cb85f172ad 99 PRINTS PR00607 Class IE cytochrome C signature 85 96 2.9E-8 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CHH28_RS19280 e70e4867ccbbf2d2691103cb85f172ad 99 PRINTS PR00607 Class IE cytochrome C signature 70 82 2.9E-8 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CHH28_RS19280 e70e4867ccbbf2d2691103cb85f172ad 99 Gene3D G3DSA:1.10.760.10 26 99 2.4E-10 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS19280 e70e4867ccbbf2d2691103cb85f172ad 99 SUPERFAMILY SSF46626 27 96 1.05E-15 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS09395 8017a303a860dcb068ec584b02e34fcb 287 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 52 284 1.2E-78 T 29-03-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CHH28_RS09395 8017a303a860dcb068ec584b02e34fcb 287 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 12 286 46.343 T 29-03-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 CHH28_RS09395 8017a303a860dcb068ec584b02e34fcb 287 Pfam PF02666 Phosphatidylserine decarboxylase 65 283 1.6E-62 T 29-03-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CHH28_RS12975 2dee936350e366787d1e607739e57746 411 Gene3D G3DSA:3.90.226.10 215 404 4.3E-20 T 29-03-2018 CHH28_RS12975 2dee936350e366787d1e607739e57746 411 SUPERFAMILY SSF52096 25 118 2.15E-23 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS12975 2dee936350e366787d1e607739e57746 411 SUPERFAMILY SSF52096 232 402 2.15E-23 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS10675 5038590c2bbee1a8c39a5781ce336ec7 374 Gene3D G3DSA:3.40.190.10 62 353 0.0028 T 29-03-2018 CHH28_RS02045 8082e36b049f078a6874387ffd90c1e7 185 Pfam PF01169 Uncharacterized protein family UPF0016 6 80 2.0E-19 T 29-03-2018 IPR001727 Gdt1 family CHH28_RS02045 8082e36b049f078a6874387ffd90c1e7 185 Pfam PF01169 Uncharacterized protein family UPF0016 105 178 2.3E-21 T 29-03-2018 IPR001727 Gdt1 family CHH28_RS02365 2a36eddffa0de06367cf5f98b3c1aa08 654 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 440 619 5.8E-40 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS02365 2a36eddffa0de06367cf5f98b3c1aa08 654 Gene3D G3DSA:1.10.287.950 320 430 7.4E-9 T 29-03-2018 CHH28_RS02365 2a36eddffa0de06367cf5f98b3c1aa08 654 Gene3D G3DSA:1.10.287.950 431 654 1.9E-44 T 29-03-2018 CHH28_RS02365 2a36eddffa0de06367cf5f98b3c1aa08 654 SMART SM00283 392 650 2.6E-54 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS02365 2a36eddffa0de06367cf5f98b3c1aa08 654 SUPERFAMILY SSF58104 345 653 1.22E-63 T 29-03-2018 CHH28_RS02365 2a36eddffa0de06367cf5f98b3c1aa08 654 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 413 442 6.9E-25 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS02365 2a36eddffa0de06367cf5f98b3c1aa08 654 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 490 517 6.9E-25 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS02365 2a36eddffa0de06367cf5f98b3c1aa08 654 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 519 548 6.9E-25 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS02365 2a36eddffa0de06367cf5f98b3c1aa08 654 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 567 596 6.9E-25 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS02365 2a36eddffa0de06367cf5f98b3c1aa08 654 Pfam PF08376 Nitrate and nitrite sensing 55 285 5.6E-47 T 29-03-2018 IPR013587 Nitrate/nitrite sensing protein CHH28_RS10250 c5c9fa24b51033f7d4f7a4036a6223f6 246 SUPERFAMILY SSF160246 9 71 2.88E-12 T 29-03-2018 CHH28_RS17530 0abc902b3895a4cb3130823fa34d3b95 251 Pfam PF11306 Protein of unknown function (DUF3108) 26 228 4.6E-16 T 29-03-2018 IPR021457 Protein of unknown function DUF3108 CHH28_RS04545 2c1d2af0cbd61255889f6dfb17666db2 370 Pfam PF02481 DNA recombination-mediator protein A 76 280 1.3E-74 T 29-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CHH28_RS04545 2c1d2af0cbd61255889f6dfb17666db2 370 Gene3D G3DSA:1.10.10.10 293 370 1.9E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04545 2c1d2af0cbd61255889f6dfb17666db2 370 Gene3D G3DSA:3.40.50.450 114 264 2.2E-34 T 29-03-2018 CHH28_RS04545 2c1d2af0cbd61255889f6dfb17666db2 370 SUPERFAMILY SSF102405 88 289 2.98E-42 T 29-03-2018 CHH28_RS04545 2c1d2af0cbd61255889f6dfb17666db2 370 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 73 289 5.0E-75 T 29-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CHH28_RS11445 0ee950bd3c17f8dde85c2c042c7d62a4 248 Pfam PF00318 Ribosomal protein S2 9 224 1.0E-94 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS11445 0ee950bd3c17f8dde85c2c042c7d62a4 248 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.004 T 29-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS11445 0ee950bd3c17f8dde85c2c042c7d62a4 248 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 29-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CHH28_RS11445 0ee950bd3c17f8dde85c2c042c7d62a4 248 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.5E-37 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS11445 0ee950bd3c17f8dde85c2c042c7d62a4 248 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.5E-37 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS11445 0ee950bd3c17f8dde85c2c042c7d62a4 248 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.5E-37 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS11445 0ee950bd3c17f8dde85c2c042c7d62a4 248 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.5E-37 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS11445 0ee950bd3c17f8dde85c2c042c7d62a4 248 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.5E-37 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS11445 0ee950bd3c17f8dde85c2c042c7d62a4 248 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.5E-37 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS11445 0ee950bd3c17f8dde85c2c042c7d62a4 248 Gene3D G3DSA:3.40.50.10490 5 248 3.9E-93 T 29-03-2018 CHH28_RS11445 0ee950bd3c17f8dde85c2c042c7d62a4 248 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 4.4E-105 T 29-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS11445 0ee950bd3c17f8dde85c2c042c7d62a4 248 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 29-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CHH28_RS11445 0ee950bd3c17f8dde85c2c042c7d62a4 248 SUPERFAMILY SSF52313 6 228 3.14E-94 T 29-03-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain CHH28_RS18575 654b8ba4741f30d697df54605c2e4e7d 397 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 381 1.6E-42 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS18575 654b8ba4741f30d697df54605c2e4e7d 397 SUPERFAMILY SSF55073 232 383 1.33E-45 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS18575 654b8ba4741f30d697df54605c2e4e7d 397 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 223 385 7.3E-50 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS18575 654b8ba4741f30d697df54605c2e4e7d 397 SMART SM00267 216 385 2.9E-56 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS18575 654b8ba4741f30d697df54605c2e4e7d 397 Gene3D G3DSA:3.30.70.270 211 385 1.2E-54 T 29-03-2018 CHH28_RS13610 1a436db6d9380ca4482366bca21b7bef 210 Pfam PF02397 Bacterial sugar transferase 12 205 1.7E-61 T 29-03-2018 IPR003362 Bacterial sugar transferase CHH28_RS12510 738e513249ac5ad08a82fbbd8b9b6ff0 346 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 61 305 1.4E-43 T 29-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CHH28_RS12510 738e513249ac5ad08a82fbbd8b9b6ff0 346 SUPERFAMILY SSF52540 92 310 6.34E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS12510 738e513249ac5ad08a82fbbd8b9b6ff0 346 Gene3D G3DSA:3.40.50.300 87 249 2.6E-19 T 29-03-2018 CHH28_RS12510 738e513249ac5ad08a82fbbd8b9b6ff0 346 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 27 313 29.284 T 29-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CHH28_RS12510 738e513249ac5ad08a82fbbd8b9b6ff0 346 Pfam PF03193 RsgA GTPase 75 249 5.9E-42 T 29-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 CHH28_RS12510 738e513249ac5ad08a82fbbd8b9b6ff0 346 Gene3D G3DSA:1.10.40.50 252 318 7.2E-19 T 29-03-2018 CHH28_RS07240 a4e0ec03ed52db7b84bd622969dff880 142 Gene3D G3DSA:3.90.1010.10 2 141 1.4E-48 T 29-03-2018 CHH28_RS07240 a4e0ec03ed52db7b84bd622969dff880 142 Pfam PF02657 Fe-S metabolism associated domain 18 136 1.4E-46 T 29-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like CHH28_RS07240 a4e0ec03ed52db7b84bd622969dff880 142 SUPERFAMILY SSF82649 6 138 6.28E-46 T 29-03-2018 CHH28_RS08170 a40c05b467f9db19e54c28fc5d216a66 719 Pfam PF00593 TonB dependent receptor 200 717 3.8E-33 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS08170 a40c05b467f9db19e54c28fc5d216a66 719 SUPERFAMILY SSF56935 8 719 5.9E-96 T 29-03-2018 CHH28_RS08170 a40c05b467f9db19e54c28fc5d216a66 719 Gene3D G3DSA:2.40.170.20 151 719 7.4E-58 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS08170 a40c05b467f9db19e54c28fc5d216a66 719 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 702 719 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site CHH28_RS08170 a40c05b467f9db19e54c28fc5d216a66 719 Pfam PF07715 TonB-dependent Receptor Plug Domain 31 139 9.3E-14 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS08170 a40c05b467f9db19e54c28fc5d216a66 719 Gene3D G3DSA:2.170.130.10 8 145 1.1E-18 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS08560 ac433c197150e549b4dfc62adebdf953 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 3.8E-30 T 29-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CHH28_RS08560 ac433c197150e549b4dfc62adebdf953 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 23.544 T 29-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CHH28_RS08560 ac433c197150e549b4dfc62adebdf953 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 6.5E-19 T 29-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CHH28_RS08560 ac433c197150e549b4dfc62adebdf953 95 SUPERFAMILY SSF141000 3 93 2.35E-28 T 29-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CHH28_RS13785 a2d0aea1720666564bc879e270fee39c 233 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 17 126 2.4E-17 T 29-03-2018 IPR010239 Conserved hypothetical protein CHP02001 CHH28_RS13785 a2d0aea1720666564bc879e270fee39c 233 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 5 219 3.5E-27 T 29-03-2018 IPR010239 Conserved hypothetical protein CHP02001 CHH28_RS13785 a2d0aea1720666564bc879e270fee39c 233 Gene3D G3DSA:2.40.160.20 10 168 0.0028 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS11865 4bc9e91e0d390e33cccfe8c8ab3b902b 161 Gene3D G3DSA:2.30.30.40 91 144 2.3E-15 T 29-03-2018 CHH28_RS11865 4bc9e91e0d390e33cccfe8c8ab3b902b 161 Gene3D G3DSA:2.40.50.180 30 90 2.2E-14 T 29-03-2018 CHH28_RS11865 4bc9e91e0d390e33cccfe8c8ab3b902b 161 SUPERFAMILY SSF50341 12 154 2.88E-33 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS11865 4bc9e91e0d390e33cccfe8c8ab3b902b 161 Pfam PF01584 CheW-like domain 13 153 2.6E-33 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS11865 4bc9e91e0d390e33cccfe8c8ab3b902b 161 SMART SM00260 9 150 3.8E-26 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CHH28_RS16070 19ecc7d0cb453125c39e02757f5982e9 451 Gene3D G3DSA:3.40.50.1820 131 441 8.9E-4 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS16070 19ecc7d0cb453125c39e02757f5982e9 451 Pfam PF12048 Protein of unknown function (DUF3530) 32 436 1.3E-68 T 29-03-2018 IPR022529 Protein of unknown function DUF3530 CHH28_RS16070 19ecc7d0cb453125c39e02757f5982e9 451 SUPERFAMILY SSF53474 128 209 3.43E-5 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS10695 598a67ceb7b2c92c7a0552e75f885180 244 SUPERFAMILY SSF53335 188 216 3.57E-19 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS10695 598a67ceb7b2c92c7a0552e75f885180 244 SUPERFAMILY SSF53335 30 153 3.57E-19 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS10695 598a67ceb7b2c92c7a0552e75f885180 244 Gene3D G3DSA:3.40.50.150 10 224 1.8E-14 T 29-03-2018 CHH28_RS10695 598a67ceb7b2c92c7a0552e75f885180 244 Pfam PF13489 Methyltransferase domain 25 210 7.7E-7 T 29-03-2018 CHH28_RS16555 74cc3a0e70d26443393ae25ad6c40409 162 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 56 74 - T 29-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CHH28_RS16555 74cc3a0e70d26443393ae25ad6c40409 162 Pfam PF02082 Transcriptional regulator 10 89 5.8E-19 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CHH28_RS16555 74cc3a0e70d26443393ae25ad6c40409 162 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 8 137 2.7E-42 T 29-03-2018 IPR014290 SUF system FeS cluster assembly regulator CHH28_RS16555 74cc3a0e70d26443393ae25ad6c40409 162 SUPERFAMILY SSF46785 10 139 3.67E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS16555 74cc3a0e70d26443393ae25ad6c40409 162 Gene3D G3DSA:1.10.10.10 9 148 1.4E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS16555 74cc3a0e70d26443393ae25ad6c40409 162 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 13 137 4.5E-27 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CHH28_RS13925 61c092462e3a39cdd269ee60077b4a7b 368 Pfam PF12146 Serine aminopeptidase, S33 92 349 6.8E-51 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CHH28_RS13925 61c092462e3a39cdd269ee60077b4a7b 368 Gene3D G3DSA:3.40.50.1820 56 368 4.7E-37 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS13925 61c092462e3a39cdd269ee60077b4a7b 368 SUPERFAMILY SSF53474 84 363 1.0E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS17175 f3eba500ce493fdc0d4709a6d803b646 342 SUPERFAMILY SSF88713 34 231 6.18E-34 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CHH28_RS17175 f3eba500ce493fdc0d4709a6d803b646 342 Gene3D G3DSA:3.20.20.370 22 337 1.8E-36 T 29-03-2018 CHH28_RS17175 f3eba500ce493fdc0d4709a6d803b646 342 Pfam PF01522 Polysaccharide deacetylase 73 202 2.3E-26 T 29-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CHH28_RS11535 2b5471c842ee9b9b9412b6407a9c33ac 276 Gene3D G3DSA:3.40.190.10 22 259 2.4E-9 T 29-03-2018 CHH28_RS11535 2b5471c842ee9b9b9412b6407a9c33ac 276 SUPERFAMILY SSF53850 32 246 1.99E-14 T 29-03-2018 CHH28_RS02060 a1204c5efc3e68922908d5bc69eb8ca9 297 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 17 264 4.4E-94 T 29-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CHH28_RS02060 a1204c5efc3e68922908d5bc69eb8ca9 297 PIRSF PIRSF018982 1 275 1.1E-91 T 29-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CHH28_RS05175 0080dea9be325a4b30d6e24f7904b394 161 SUPERFAMILY SSF55729 31 149 3.66E-18 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS05175 0080dea9be325a4b30d6e24f7904b394 161 Gene3D G3DSA:3.40.630.30 7 149 3.3E-17 T 29-03-2018 CHH28_RS05175 0080dea9be325a4b30d6e24f7904b394 161 Pfam PF00583 Acetyltransferase (GNAT) family 42 140 2.4E-12 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS02545 8c5c68527be89ddc05940bf19d7a9be3 332 SUPERFAMILY SSF51679 7 330 1.7E-80 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CHH28_RS02545 8c5c68527be89ddc05940bf19d7a9be3 332 Pfam PF00296 Luciferase-like monooxygenase 25 297 2.7E-36 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CHH28_RS02545 8c5c68527be89ddc05940bf19d7a9be3 332 Gene3D G3DSA:3.20.20.30 1 331 1.8E-68 T 29-03-2018 CHH28_RS02545 8c5c68527be89ddc05940bf19d7a9be3 332 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 328 2.0E-122 T 29-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 CHH28_RS03605 e7cccb30c0b6bb671facafc27d8d3f5c 212 Gene3D G3DSA:3.40.50.720 2 212 3.5E-24 T 29-03-2018 CHH28_RS03605 e7cccb30c0b6bb671facafc27d8d3f5c 212 Pfam PF13460 NAD(P)H-binding 7 198 3.6E-32 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS03605 e7cccb30c0b6bb671facafc27d8d3f5c 212 SUPERFAMILY SSF51735 2 210 4.12E-33 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS05275 52637d74328ff520dc0acdc3e4e9d4fd 880 Pfam PF11739 Dicarboxylate transport 662 873 1.0E-46 T 29-03-2018 IPR021730 Dicarboxylate transport CHH28_RS07605 ad1ca1e4dc82eb224024379cba773fa7 137 Pfam PF12802 MarR family 28 87 6.9E-14 T 29-03-2018 CHH28_RS07605 ad1ca1e4dc82eb224024379cba773fa7 137 SUPERFAMILY SSF46785 2 136 4.49E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS07605 ad1ca1e4dc82eb224024379cba773fa7 137 SMART SM00347 23 123 4.7E-14 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CHH28_RS07605 ad1ca1e4dc82eb224024379cba773fa7 137 Gene3D G3DSA:1.10.10.10 1 137 3.6E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04980 4359e768eb2ce813932bff8df5744abf 248 Gene3D G3DSA:3.40.190.10 124 248 6.4E-7 T 29-03-2018 CHH28_RS04980 4359e768eb2ce813932bff8df5744abf 248 SUPERFAMILY SSF53850 24 248 5.1E-32 T 29-03-2018 CHH28_RS04980 4359e768eb2ce813932bff8df5744abf 248 Gene3D G3DSA:3.40.190.10 15 123 1.3E-16 T 29-03-2018 CHH28_RS04980 4359e768eb2ce813932bff8df5744abf 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 248 3.0E-23 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS04980 4359e768eb2ce813932bff8df5744abf 248 SMART SM00062 21 248 6.4E-4 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS10645 f02bfa60cb5548c2140a46681afb84fa 164 SUPERFAMILY SSF55729 1 153 7.25E-28 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS10645 f02bfa60cb5548c2140a46681afb84fa 164 Pfam PF00583 Acetyltransferase (GNAT) family 46 139 2.9E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS10645 f02bfa60cb5548c2140a46681afb84fa 164 Gene3D G3DSA:3.40.630.30 1 164 9.7E-29 T 29-03-2018 CHH28_RS02550 095738f702876230dcaa81065a9d5160 106 Gene3D G3DSA:1.10.400.10 1 98 4.9E-4 T 29-03-2018 IPR011025 G protein alpha subunit, helical insertion GO:0004871|GO:0007165 CHH28_RS04075 bd4804a7103073984064aade96fc7dbf 282 Pfam PF13460 NAD(P)H-binding 9 187 6.1E-16 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS04075 bd4804a7103073984064aade96fc7dbf 282 Gene3D G3DSA:3.40.50.720 3 275 1.5E-27 T 29-03-2018 CHH28_RS04075 bd4804a7103073984064aade96fc7dbf 282 SUPERFAMILY SSF51735 4 232 3.85E-34 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS02480 eb51b11d331ec87c956bd403f76002d3 126 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 4 108 32.148 T 29-03-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CHH28_RS02480 eb51b11d331ec87c956bd403f76002d3 126 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 104 2.3E-34 T 29-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CHH28_RS02480 eb51b11d331ec87c956bd403f76002d3 126 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 53 104 6.0E-22 T 29-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CHH28_RS02480 eb51b11d331ec87c956bd403f76002d3 126 SUPERFAMILY SSF141734 4 120 1.07E-48 T 29-03-2018 CHH28_RS08340 9e38e61e266dc1068e5538bdfadccf46 431 Pfam PF01266 FAD dependent oxidoreductase 2 398 3.4E-69 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CHH28_RS08340 9e38e61e266dc1068e5538bdfadccf46 431 SUPERFAMILY SSF54373 271 361 2.35E-17 T 29-03-2018 CHH28_RS08340 9e38e61e266dc1068e5538bdfadccf46 431 SUPERFAMILY SSF51905 1 54 2.46E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS08340 9e38e61e266dc1068e5538bdfadccf46 431 SUPERFAMILY SSF51905 361 419 2.46E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS08340 9e38e61e266dc1068e5538bdfadccf46 431 SUPERFAMILY SSF51905 108 271 2.46E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS08340 9e38e61e266dc1068e5538bdfadccf46 431 Gene3D G3DSA:3.50.50.60 1 429 2.5E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS08375 ac36897c23ac6108d85bbe337f2468a1 406 Pfam PF03594 Benzoate membrane transport protein 23 394 7.5E-138 T 29-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 CHH28_RS08375 ac36897c23ac6108d85bbe337f2468a1 406 TIGRFAM TIGR00843 benE: benzoate transporter 20 395 1.7E-127 T 29-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 CHH28_RS11545 9a84ab3968171bdf6ed04de2b4bada0d 106 Gene3D G3DSA:3.30.70.120 1 106 4.1E-11 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CHH28_RS11545 9a84ab3968171bdf6ed04de2b4bada0d 106 Pfam PF00543 Nitrogen regulatory protein P-II 14 90 7.9E-6 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CHH28_RS11545 9a84ab3968171bdf6ed04de2b4bada0d 106 SUPERFAMILY SSF54913 1 105 2.76E-18 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CHH28_RS01620 7d1de05e2a93ac5c6f6ce155bf58a7c5 162 PIRSF PIRSF019239 2 162 2.0E-46 T 29-03-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 CHH28_RS01620 7d1de05e2a93ac5c6f6ce155bf58a7c5 162 Pfam PF01899 Na+/H+ ion antiporter subunit 13 159 6.8E-46 T 29-03-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 CHH28_RS09925 36c2a724f8399a58355519afd07054b3 296 Pfam PF01758 Sodium Bile acid symporter family 11 193 1.9E-31 T 29-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CHH28_RS06240 fa832b80da3d77a90e76c27071a37969 313 Gene3D G3DSA:3.40.50.1820 28 313 1.3E-30 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS06240 fa832b80da3d77a90e76c27071a37969 313 Pfam PF00561 alpha/beta hydrolase fold 37 231 2.1E-13 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS06240 fa832b80da3d77a90e76c27071a37969 313 SUPERFAMILY SSF53474 33 310 2.18E-37 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS03815 bc6b239c5f18e747cdf0cd2cf1dc0bc8 354 SUPERFAMILY SSF55874 222 325 9.78E-6 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03815 bc6b239c5f18e747cdf0cd2cf1dc0bc8 354 Gene3D G3DSA:3.30.565.10 182 350 2.7E-6 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS03815 bc6b239c5f18e747cdf0cd2cf1dc0bc8 354 Pfam PF06580 Histidine kinase 166 243 2.1E-22 T 29-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CHH28_RS09810 3305806c47cca6be12472cc73a8528c3 130 Gene3D G3DSA:1.10.490.10 5 130 1.4E-13 T 29-03-2018 CHH28_RS09810 3305806c47cca6be12472cc73a8528c3 130 SUPERFAMILY SSF46458 6 130 6.75E-27 T 29-03-2018 IPR009050 Globin-like CHH28_RS01775 3d1cbcf30948e2288e33f5cc9a4189ec 138 SUPERFAMILY SSF53850 19 123 3.8E-7 T 29-03-2018 CHH28_RS01775 3d1cbcf30948e2288e33f5cc9a4189ec 138 Gene3D G3DSA:3.40.190.10 22 130 0.0012 T 29-03-2018 CHH28_RS11760 d7d80b266247e3a62f375a71ce05eaa5 245 Gene3D G3DSA:3.40.50.300 2 244 5.3E-40 T 29-03-2018 CHH28_RS11760 d7d80b266247e3a62f375a71ce05eaa5 245 Pfam PF13614 AAA domain 1 165 1.4E-30 T 29-03-2018 IPR025669 AAA domain CHH28_RS11760 d7d80b266247e3a62f375a71ce05eaa5 245 SUPERFAMILY SSF52540 1 241 7.7E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11930 e3abfd57a96ae32be430a2fdf3915fd5 174 Gene3D G3DSA:3.40.50.300 1 168 2.3E-10 T 29-03-2018 CHH28_RS11930 e3abfd57a96ae32be430a2fdf3915fd5 174 SUPERFAMILY SSF52540 1 110 6.56E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS01540 8444ecf3efe385a25c5121dec441acc7 359 SUPERFAMILY SSF111369 41 280 1.7E-64 T 29-03-2018 CHH28_RS01540 8444ecf3efe385a25c5121dec441acc7 359 Gene3D G3DSA:2.40.50.100 51 108 4.6E-15 T 29-03-2018 CHH28_RS01540 8444ecf3efe385a25c5121dec441acc7 359 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 30 356 9.8E-78 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CHH28_RS01540 8444ecf3efe385a25c5121dec441acc7 359 Gene3D G3DSA:2.40.50.100 157 359 1.0E-5 T 29-03-2018 CHH28_RS01540 8444ecf3efe385a25c5121dec441acc7 359 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 40 275 3.5E-18 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CHH28_RS01540 8444ecf3efe385a25c5121dec441acc7 359 Gene3D G3DSA:1.10.287.470 109 156 3.4E-11 T 29-03-2018 CHH28_RS18930 fbf37c385b3514c7bf80689eb3b1bc0a 365 PRINTS PR01010 Flagellar P-ring protein signature 38 53 3.4E-84 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CHH28_RS18930 fbf37c385b3514c7bf80689eb3b1bc0a 365 PRINTS PR01010 Flagellar P-ring protein signature 103 120 3.4E-84 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CHH28_RS18930 fbf37c385b3514c7bf80689eb3b1bc0a 365 PRINTS PR01010 Flagellar P-ring protein signature 23 38 3.4E-84 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CHH28_RS18930 fbf37c385b3514c7bf80689eb3b1bc0a 365 PRINTS PR01010 Flagellar P-ring protein signature 120 138 3.4E-84 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CHH28_RS18930 fbf37c385b3514c7bf80689eb3b1bc0a 365 PRINTS PR01010 Flagellar P-ring protein signature 55 70 3.4E-84 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CHH28_RS18930 fbf37c385b3514c7bf80689eb3b1bc0a 365 PRINTS PR01010 Flagellar P-ring protein signature 81 100 3.4E-84 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CHH28_RS18930 fbf37c385b3514c7bf80689eb3b1bc0a 365 PRINTS PR01010 Flagellar P-ring protein signature 161 179 3.4E-84 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CHH28_RS18930 fbf37c385b3514c7bf80689eb3b1bc0a 365 PRINTS PR01010 Flagellar P-ring protein signature 251 263 3.4E-84 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CHH28_RS18930 fbf37c385b3514c7bf80689eb3b1bc0a 365 PRINTS PR01010 Flagellar P-ring protein signature 187 205 3.4E-84 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CHH28_RS18930 fbf37c385b3514c7bf80689eb3b1bc0a 365 Pfam PF02119 Flagellar P-ring protein 23 364 2.7E-140 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CHH28_RS18930 fbf37c385b3514c7bf80689eb3b1bc0a 365 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 365 39.325 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CHH28_RS05550 ca4edb81ac3d6f2781b951e64cd25cde 230 SUPERFAMILY SSF56112 57 196 1.37E-10 T 29-03-2018 IPR011009 Protein kinase-like domain CHH28_RS05550 ca4edb81ac3d6f2781b951e64cd25cde 230 Gene3D G3DSA:3.90.1200.10 11 226 1.8E-8 T 29-03-2018 CHH28_RS05280 5b4015e13a16aebba57eaf4f05373dd0 223 SUPERFAMILY SSF75445 131 202 4.32E-24 T 29-03-2018 CHH28_RS05280 5b4015e13a16aebba57eaf4f05373dd0 223 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 7 218 7.2E-63 T 29-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CHH28_RS05280 5b4015e13a16aebba57eaf4f05373dd0 223 Gene3D G3DSA:3.30.70.260 142 200 4.8E-24 T 29-03-2018 CHH28_RS05280 5b4015e13a16aebba57eaf4f05373dd0 223 SUPERFAMILY SSF100950 1 150 2.47E-43 T 29-03-2018 CHH28_RS05280 5b4015e13a16aebba57eaf4f05373dd0 223 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 221 32.41 T 29-03-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CHH28_RS05280 5b4015e13a16aebba57eaf4f05373dd0 223 Gene3D G3DSA:3.40.50.1360 1 141 3.0E-40 T 29-03-2018 CHH28_RS05280 5b4015e13a16aebba57eaf4f05373dd0 223 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 53 214 6.1E-58 T 29-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CHH28_RS10115 10c20eb7c5570fb92010fb00772f7de3 626 Pfam PF08811 Protein of unknown function (DUF1800) 76 623 4.7E-83 T 29-03-2018 IPR014917 Protein of unknown function DUF1800 CHH28_RS02560 e777d10203084b7f03c1cb72b01f355d 55 Gene3D G3DSA:3.40.630.30 1 53 1.7E-6 T 29-03-2018 CHH28_RS02560 e777d10203084b7f03c1cb72b01f355d 55 SUPERFAMILY SSF55729 1 42 1.67E-9 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS02560 e777d10203084b7f03c1cb72b01f355d 55 Pfam PF13302 Acetyltransferase (GNAT) domain 1 41 3.6E-6 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS03395 9edfccd98dca361c3f809acc2cb46c3a 212 Gene3D G3DSA:3.20.20.80 32 182 6.5E-5 T 29-03-2018 CHH28_RS03395 9edfccd98dca361c3f809acc2cb46c3a 212 Pfam PF10679 Protein of unknown function (DUF2491) 1 209 1.1E-67 T 29-03-2018 IPR019621 Protein of unknown function DUF2491 CHH28_RS08800 8398779e55772d4122c261a00b316f37 166 Gene3D G3DSA:1.10.10.10 17 64 1.5E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS08800 8398779e55772d4122c261a00b316f37 166 Pfam PF02631 RecX family 46 157 6.4E-31 T 29-03-2018 IPR003783 Regulatory protein RecX GO:0006282 CHH28_RS08800 8398779e55772d4122c261a00b316f37 166 Gene3D G3DSA:1.10.10.10 111 160 1.0E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS08800 8398779e55772d4122c261a00b316f37 166 Gene3D G3DSA:1.10.10.10 66 109 9.2E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS08800 8398779e55772d4122c261a00b316f37 166 Hamap MF_01114 Regulatory protein RecX [recX]. 10 162 15.171 T 29-03-2018 IPR003783 Regulatory protein RecX GO:0006282 CHH28_RS03190 b4b8c24bb260e4984220824edf4a789f 422 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 210 2.4E-64 T 29-03-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 CHH28_RS03190 b4b8c24bb260e4984220824edf4a789f 422 Pfam PF00534 Glycosyl transferases group 1 296 399 1.7E-9 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CHH28_RS03190 b4b8c24bb260e4984220824edf4a789f 422 Gene3D G3DSA:3.40.190.10 48 182 0.012 T 29-03-2018 CHH28_RS03190 b4b8c24bb260e4984220824edf4a789f 422 Gene3D G3DSA:3.40.50.2000 211 405 3.4E-20 T 29-03-2018 CHH28_RS03190 b4b8c24bb260e4984220824edf4a789f 422 SUPERFAMILY SSF53756 58 418 2.12E-18 T 29-03-2018 CHH28_RS08065 8c4bbcd273cff4305854f23a87ddda7f 438 Pfam PF14240 YHYH protein 198 410 4.1E-45 T 29-03-2018 IPR025924 YHYH domain CHH28_RS00680 5472c1740ff80d581e1aa6af30bde116 444 SUPERFAMILY SSF55909 3 441 4.32E-177 T 29-03-2018 CHH28_RS00680 5472c1740ff80d581e1aa6af30bde116 444 Gene3D G3DSA:3.75.10.20 2 442 3.9E-190 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CHH28_RS00680 5472c1740ff80d581e1aa6af30bde116 444 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 444 51.642 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CHH28_RS00680 5472c1740ff80d581e1aa6af30bde116 444 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 4 441 5.5E-165 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CHH28_RS00680 5472c1740ff80d581e1aa6af30bde116 444 Pfam PF04996 Succinylarginine dihydrolase 3 441 8.3E-185 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CHH28_RS09500 b9e2f5acad1441ce43e5dc03777e2051 430 SMART SM00788 4 423 1.5E-283 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CHH28_RS09500 b9e2f5acad1441ce43e5dc03777e2051 430 Gene3D G3DSA:3.90.170.10 266 430 7.9E-68 T 29-03-2018 CHH28_RS09500 b9e2f5acad1441ce43e5dc03777e2051 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 428 1.5E-181 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CHH28_RS09500 b9e2f5acad1441ce43e5dc03777e2051 430 Gene3D G3DSA:3.40.440.10 1 158 3.6E-55 T 29-03-2018 CHH28_RS09500 b9e2f5acad1441ce43e5dc03777e2051 430 Gene3D G3DSA:3.40.440.10 159 265 2.9E-23 T 29-03-2018 CHH28_RS09500 b9e2f5acad1441ce43e5dc03777e2051 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 29-03-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CHH28_RS09500 b9e2f5acad1441ce43e5dc03777e2051 430 SUPERFAMILY SSF52540 4 428 4.99E-171 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09500 b9e2f5acad1441ce43e5dc03777e2051 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 29-03-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CHH28_RS09500 b9e2f5acad1441ce43e5dc03777e2051 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 204.518 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CHH28_RS09500 b9e2f5acad1441ce43e5dc03777e2051 430 Pfam PF00709 Adenylosuccinate synthetase 5 422 4.2E-176 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CHH28_RS14795 2a3aff1b393eccfa0f755ecae790ec67 179 Pfam PF02371 Transposase IS116/IS110/IS902 family 47 125 9.0E-24 T 29-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CHH28_RS09605 c4b26ad8d44559bf5878c2d175b5a94e 1033 Pfam PF05567 Neisseria PilC beta-propeller domain 502 775 3.4E-11 T 29-03-2018 IPR008707 PilC beta-propeller domain CHH28_RS09605 c4b26ad8d44559bf5878c2d175b5a94e 1033 Pfam PF13519 von Willebrand factor type A domain 39 141 7.8E-7 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS09605 c4b26ad8d44559bf5878c2d175b5a94e 1033 Gene3D G3DSA:3.40.50.410 31 348 4.7E-38 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS09605 c4b26ad8d44559bf5878c2d175b5a94e 1033 SUPERFAMILY SSF53300 38 152 4.96E-13 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS09605 c4b26ad8d44559bf5878c2d175b5a94e 1033 SUPERFAMILY SSF53300 279 343 4.96E-13 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS09605 c4b26ad8d44559bf5878c2d175b5a94e 1033 SUPERFAMILY SSF53300 207 225 4.96E-13 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS16110 b0511deb4a05b72bc4157f58d2918e20 393 PRINTS PR00166 Aromatic amino acid permease signature 87 107 8.8E-80 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CHH28_RS16110 b0511deb4a05b72bc4157f58d2918e20 393 PRINTS PR00166 Aromatic amino acid permease signature 42 61 8.8E-80 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CHH28_RS16110 b0511deb4a05b72bc4157f58d2918e20 393 PRINTS PR00166 Aromatic amino acid permease signature 152 172 8.8E-80 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CHH28_RS16110 b0511deb4a05b72bc4157f58d2918e20 393 PRINTS PR00166 Aromatic amino acid permease signature 282 301 8.8E-80 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CHH28_RS16110 b0511deb4a05b72bc4157f58d2918e20 393 PRINTS PR00166 Aromatic amino acid permease signature 337 356 8.8E-80 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CHH28_RS16110 b0511deb4a05b72bc4157f58d2918e20 393 PRINTS PR00166 Aromatic amino acid permease signature 15 38 8.8E-80 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CHH28_RS16110 b0511deb4a05b72bc4157f58d2918e20 393 PRINTS PR00166 Aromatic amino acid permease signature 316 334 8.8E-80 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CHH28_RS16110 b0511deb4a05b72bc4157f58d2918e20 393 PRINTS PR00166 Aromatic amino acid permease signature 186 208 8.8E-80 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CHH28_RS16110 b0511deb4a05b72bc4157f58d2918e20 393 PRINTS PR00166 Aromatic amino acid permease signature 225 244 8.8E-80 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CHH28_RS16110 b0511deb4a05b72bc4157f58d2918e20 393 Pfam PF03222 Tryptophan/tyrosine permease family 9 389 2.8E-116 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CHH28_RS16110 b0511deb4a05b72bc4157f58d2918e20 393 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 12 380 7.0E-117 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CHH28_RS17825 d2cd60ab05a7724209140fc5d896ea24 266 Pfam PF00892 EamA-like transporter family 129 252 4.0E-12 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS17825 d2cd60ab05a7724209140fc5d896ea24 266 Pfam PF00892 EamA-like transporter family 3 117 1.9E-15 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS17825 d2cd60ab05a7724209140fc5d896ea24 266 SUPERFAMILY SSF103481 20 121 6.41E-17 T 29-03-2018 CHH28_RS17825 d2cd60ab05a7724209140fc5d896ea24 266 SUPERFAMILY SSF103481 162 261 9.68E-16 T 29-03-2018 CHH28_RS12355 1a13f47316387d7543f0fcbddbd1652e 67 Pfam PF14086 Domain of unknown function (DUF4266) 18 67 9.7E-22 T 29-03-2018 IPR025362 Domain of unknown function DUF4266 CHH28_RS01885 cae87bda05ac46e5c43fae593dee0a2c 132 Pfam PF04138 GtrA-like protein 17 128 9.5E-17 T 29-03-2018 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 CHH28_RS14165 509dc4bfa4806d048e892420ffdbf036 449 Pfam PF01136 Peptidase family U32 79 342 6.2E-96 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CHH28_RS14165 509dc4bfa4806d048e892420ffdbf036 449 Pfam PF16325 Peptidase family U32 C-terminal domain 359 442 1.8E-15 T 29-03-2018 IPR032525 Peptidase family U32, C-terminal CHH28_RS14165 509dc4bfa4806d048e892420ffdbf036 449 Gene3D G3DSA:3.20.20.70 9 321 7.0E-4 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS14165 509dc4bfa4806d048e892420ffdbf036 449 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CHH28_RS14695 67c404349b3a509566fe848513558016 360 Pfam PF04820 Tryptophan halogenase 3 60 1.9E-5 T 29-03-2018 IPR006905 Flavin-dependent halogenase CHH28_RS14695 67c404349b3a509566fe848513558016 360 Pfam PF04820 Tryptophan halogenase 93 355 1.1E-10 T 29-03-2018 IPR006905 Flavin-dependent halogenase CHH28_RS14695 67c404349b3a509566fe848513558016 360 Gene3D G3DSA:3.50.50.60 2 356 3.8E-33 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS14695 67c404349b3a509566fe848513558016 360 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 1.2E-10 T 29-03-2018 CHH28_RS14695 67c404349b3a509566fe848513558016 360 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 302 1.2E-10 T 29-03-2018 CHH28_RS14695 67c404349b3a509566fe848513558016 360 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 1.2E-10 T 29-03-2018 CHH28_RS14695 67c404349b3a509566fe848513558016 360 SUPERFAMILY SSF51905 2 168 2.02E-39 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS14695 67c404349b3a509566fe848513558016 360 SUPERFAMILY SSF51905 267 350 2.02E-39 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS17925 2240163b5b3f8b1e42ab007f7d02fc08 421 Gene3D G3DSA:3.20.20.10 29 264 5.7E-25 T 29-03-2018 IPR029066 PLP-binding barrel CHH28_RS17925 2240163b5b3f8b1e42ab007f7d02fc08 421 Pfam PF01168 Alanine racemase, N-terminal domain 26 249 4.6E-21 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CHH28_RS17925 2240163b5b3f8b1e42ab007f7d02fc08 421 SUPERFAMILY SSF51419 27 264 1.45E-22 T 29-03-2018 IPR029066 PLP-binding barrel CHH28_RS15890 0b073714b3f744516b5076cd73641890 251 Gene3D G3DSA:3.40.190.10 145 251 1.5E-11 T 29-03-2018 CHH28_RS15890 0b073714b3f744516b5076cd73641890 251 Gene3D G3DSA:3.40.190.10 21 144 2.2E-19 T 29-03-2018 CHH28_RS15890 0b073714b3f744516b5076cd73641890 251 SMART SM00062 31 251 2.5E-16 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS15890 0b073714b3f744516b5076cd73641890 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 250 2.3E-32 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS15890 0b073714b3f744516b5076cd73641890 251 SUPERFAMILY SSF53850 32 250 1.63E-43 T 29-03-2018 CHH28_RS19020 375537ada6c890d198cf6b5fe2137574 71 Gene3D G3DSA:3.40.190.10 1 68 3.3E-5 T 29-03-2018 CHH28_RS19020 375537ada6c890d198cf6b5fe2137574 71 SUPERFAMILY SSF53850 2 67 4.52E-7 T 29-03-2018 CHH28_RS02880 5e9dbb5edaf5cb5ff63fc4aa3d83879a 623 Gene3D G3DSA:1.20.140.10 290 480 6.7E-35 T 29-03-2018 CHH28_RS02880 5e9dbb5edaf5cb5ff63fc4aa3d83879a 623 Gene3D G3DSA:1.20.120.470 481 610 4.5E-5 T 29-03-2018 CHH28_RS02880 5e9dbb5edaf5cb5ff63fc4aa3d83879a 623 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 294 467 4.2E-19 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS02880 5e9dbb5edaf5cb5ff63fc4aa3d83879a 623 Gene3D G3DSA:2.40.110.10 167 289 4.6E-18 T 29-03-2018 CHH28_RS02880 5e9dbb5edaf5cb5ff63fc4aa3d83879a 623 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 11 38 7.4E-5 T 29-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CHH28_RS02880 5e9dbb5edaf5cb5ff63fc4aa3d83879a 623 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 484 606 2.2E-25 T 29-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CHH28_RS02880 5e9dbb5edaf5cb5ff63fc4aa3d83879a 623 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 168 277 1.4E-19 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CHH28_RS02880 5e9dbb5edaf5cb5ff63fc4aa3d83879a 623 SUPERFAMILY SSF56645 45 277 1.06E-32 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CHH28_RS02880 5e9dbb5edaf5cb5ff63fc4aa3d83879a 623 SUPERFAMILY SSF47203 298 472 5.96E-38 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CHH28_RS01400 c5bf7d25e5eb4ef546a664043c846b46 171 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 8.9E-26 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CHH28_RS01400 c5bf7d25e5eb4ef546a664043c846b46 171 SUPERFAMILY SSF55083 3 154 1.05E-36 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CHH28_RS01400 c5bf7d25e5eb4ef546a664043c846b46 171 Gene3D G3DSA:3.30.70.560 1 169 2.8E-35 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CHH28_RS01400 c5bf7d25e5eb4ef546a664043c846b46 171 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 2.6E-24 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CHH28_RS12175 6afa95d18cc6202bc341cbdcbdf4b1f0 299 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 272 5.8E-102 T 29-03-2018 IPR019991 GTP-binding protein, ribosome biogenesis CHH28_RS12175 6afa95d18cc6202bc341cbdcbdf4b1f0 299 PIRSF PIRSF006230 1 277 2.0E-96 T 29-03-2018 IPR016478 GTPase, MTG1 CHH28_RS12175 6afa95d18cc6202bc341cbdcbdf4b1f0 299 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 117 137 9.6E-6 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS12175 6afa95d18cc6202bc341cbdcbdf4b1f0 299 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 163 178 9.6E-6 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS12175 6afa95d18cc6202bc341cbdcbdf4b1f0 299 Pfam PF01926 50S ribosome-binding GTPase 116 175 4.6E-15 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CHH28_RS12175 6afa95d18cc6202bc341cbdcbdf4b1f0 299 Gene3D G3DSA:1.10.1580.10 174 275 2.0E-18 T 29-03-2018 IPR023179 GTP-binding protein, orthogonal bundle domain CHH28_RS12175 6afa95d18cc6202bc341cbdcbdf4b1f0 299 Gene3D G3DSA:1.20.120.430 10 173 3.5E-29 T 29-03-2018 CHH28_RS12175 6afa95d18cc6202bc341cbdcbdf4b1f0 299 SUPERFAMILY SSF52540 9 182 1.89E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS17985 978ca0ec9d78c489c41d1a8d702fb2cd 328 PRINTS PR01486 Bacterial phospholipase A1 protein signature 134 150 3.0E-28 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CHH28_RS17985 978ca0ec9d78c489c41d1a8d702fb2cd 328 PRINTS PR01486 Bacterial phospholipase A1 protein signature 112 129 3.0E-28 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CHH28_RS17985 978ca0ec9d78c489c41d1a8d702fb2cd 328 PRINTS PR01486 Bacterial phospholipase A1 protein signature 157 176 3.0E-28 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CHH28_RS17985 978ca0ec9d78c489c41d1a8d702fb2cd 328 PRINTS PR01486 Bacterial phospholipase A1 protein signature 275 292 3.0E-28 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CHH28_RS17985 978ca0ec9d78c489c41d1a8d702fb2cd 328 PRINTS PR01486 Bacterial phospholipase A1 protein signature 297 317 3.0E-28 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CHH28_RS17985 978ca0ec9d78c489c41d1a8d702fb2cd 328 PRINTS PR01486 Bacterial phospholipase A1 protein signature 240 258 3.0E-28 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CHH28_RS17985 978ca0ec9d78c489c41d1a8d702fb2cd 328 Gene3D G3DSA:2.40.230.10 54 328 4.0E-83 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CHH28_RS17985 978ca0ec9d78c489c41d1a8d702fb2cd 328 Pfam PF02253 Phospholipase A1 57 324 3.1E-90 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CHH28_RS17985 978ca0ec9d78c489c41d1a8d702fb2cd 328 SUPERFAMILY SSF56931 59 327 5.23E-84 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CHH28_RS07230 eedb7936d65a03da7994da3970ec0763 401 Pfam PF00375 Sodium:dicarboxylate symporter family 14 395 9.8E-68 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS07230 eedb7936d65a03da7994da3970ec0763 401 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 2 401 34.272 T 29-03-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 CHH28_RS07230 eedb7936d65a03da7994da3970ec0763 401 PRINTS PR00173 Glutamate-aspartate symporter signature 140 162 8.2E-16 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS07230 eedb7936d65a03da7994da3970ec0763 401 PRINTS PR00173 Glutamate-aspartate symporter signature 286 312 8.2E-16 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS07230 eedb7936d65a03da7994da3970ec0763 401 PRINTS PR00173 Glutamate-aspartate symporter signature 219 238 8.2E-16 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS07230 eedb7936d65a03da7994da3970ec0763 401 PRINTS PR00173 Glutamate-aspartate symporter signature 321 340 8.2E-16 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS07230 eedb7936d65a03da7994da3970ec0763 401 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 8.2E-16 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS07230 eedb7936d65a03da7994da3970ec0763 401 SUPERFAMILY SSF118215 14 397 8.89E-91 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS07230 eedb7936d65a03da7994da3970ec0763 401 Gene3D G3DSA:1.10.3860.10 3 401 1.6E-71 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS17285 17be1accc09f39ff3364791cd5192e2b 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 157 5.2E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17285 17be1accc09f39ff3364791cd5192e2b 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.2E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17285 17be1accc09f39ff3364791cd5192e2b 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 5.2E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17285 17be1accc09f39ff3364791cd5192e2b 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 175 5.2E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17285 17be1accc09f39ff3364791cd5192e2b 236 Gene3D G3DSA:3.40.50.720 2 236 2.7E-42 T 29-03-2018 CHH28_RS17285 17be1accc09f39ff3364791cd5192e2b 236 Pfam PF00106 short chain dehydrogenase 3 171 9.0E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CHH28_RS17285 17be1accc09f39ff3364791cd5192e2b 236 SUPERFAMILY SSF51735 3 226 1.24E-43 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS17285 17be1accc09f39ff3364791cd5192e2b 236 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 125 153 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CHH28_RS07165 2c0e6f3fe33e6deccb970aeac8593618 614 Gene3D G3DSA:2.80.10.50 501 604 8.2E-19 T 29-03-2018 CHH28_RS07165 2c0e6f3fe33e6deccb970aeac8593618 614 SMART SM00458 500 614 7.6E-4 T 29-03-2018 IPR000772 Ricin B, lectin domain CHH28_RS07165 2c0e6f3fe33e6deccb970aeac8593618 614 SUPERFAMILY SSF50370 509 591 4.85E-19 T 29-03-2018 IPR000772 Ricin B, lectin domain CHH28_RS07165 2c0e6f3fe33e6deccb970aeac8593618 614 Pfam PF00652 Ricin-type beta-trefoil lectin domain 509 588 2.5E-13 T 29-03-2018 IPR000772 Ricin B, lectin domain CHH28_RS07165 2c0e6f3fe33e6deccb970aeac8593618 614 Pfam PF16683 Transglutaminase elicitor 109 445 2.6E-43 T 29-03-2018 IPR032048 Transglutaminase elicitor GO:0016755 CHH28_RS12455 c01d35765a20f9d4b1daf63043d6b2a7 523 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 74 520 4.7E-143 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CHH28_RS12455 c01d35765a20f9d4b1daf63043d6b2a7 523 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 29-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 CHH28_RS12455 c01d35765a20f9d4b1daf63043d6b2a7 523 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 9.5E-180 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CHH28_RS18855 37c267efe8864b39160392959293db5c 483 SMART SM00382 165 309 2.3E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS18855 37c267efe8864b39160392959293db5c 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CHH28_RS18855 37c267efe8864b39160392959293db5c 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CHH28_RS18855 37c267efe8864b39160392959293db5c 483 Gene3D G3DSA:1.10.10.60 389 480 9.1E-17 T 29-03-2018 CHH28_RS18855 37c267efe8864b39160392959293db5c 483 SUPERFAMILY SSF52540 145 386 3.95E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS18855 37c267efe8864b39160392959293db5c 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 439 456 6.0E-9 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS18855 37c267efe8864b39160392959293db5c 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 456 476 6.0E-9 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS18855 37c267efe8864b39160392959293db5c 483 SUPERFAMILY SSF46689 425 476 1.12E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CHH28_RS18855 37c267efe8864b39160392959293db5c 483 Pfam PF00158 Sigma-54 interaction domain 145 312 2.8E-74 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CHH28_RS18855 37c267efe8864b39160392959293db5c 483 Gene3D G3DSA:3.40.50.300 140 317 4.4E-26 T 29-03-2018 CHH28_RS18855 37c267efe8864b39160392959293db5c 483 Gene3D G3DSA:1.10.8.60 318 388 8.7E-18 T 29-03-2018 CHH28_RS18855 37c267efe8864b39160392959293db5c 483 Pfam PF02954 Bacterial regulatory protein, Fis family 433 473 5.9E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CHH28_RS18855 37c267efe8864b39160392959293db5c 483 Pfam PF06490 Flagellar regulatory protein FleQ 6 122 3.4E-28 T 29-03-2018 IPR010518 Flagellar regulatory FleQ CHH28_RS18855 37c267efe8864b39160392959293db5c 483 SUPERFAMILY SSF52172 3 187 1.81E-8 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS11600 55ceb52856382f9b4126a8055c731c1c 435 Gene3D G3DSA:2.60.120.260 303 411 0.12 T 29-03-2018 IPR008979 Galactose-binding domain-like CHH28_RS11600 55ceb52856382f9b4126a8055c731c1c 435 Pfam PF14344 Domain of unknown function (DUF4397) 348 434 2.3E-8 T 29-03-2018 IPR025510 Domain of unknown function DUF4397 CHH28_RS11600 55ceb52856382f9b4126a8055c731c1c 435 Pfam PF14344 Domain of unknown function (DUF4397) 30 143 2.5E-27 T 29-03-2018 IPR025510 Domain of unknown function DUF4397 CHH28_RS11600 55ceb52856382f9b4126a8055c731c1c 435 Pfam PF14344 Domain of unknown function (DUF4397) 231 354 1.4E-18 T 29-03-2018 IPR025510 Domain of unknown function DUF4397 CHH28_RS06385 9eb22c7545bb3b650f8af74c66acfaff 421 Gene3D G3DSA:2.130.10.130 43 370 1.7E-4 T 29-03-2018 CHH28_RS06385 9eb22c7545bb3b650f8af74c66acfaff 421 Pfam PF07007 Lysozyme inhibitor LprI 25 106 4.4E-8 T 29-03-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal CHH28_RS14200 2a1ec242b2156abf3857d16a07560bbe 300 Pfam PF13271 Domain of unknown function (DUF4062) 9 88 4.5E-8 T 29-03-2018 IPR025139 Domain of unknown function DUF4062 CHH28_RS00610 173bc27985e3138b39dd2d8da318a5ba 309 Gene3D G3DSA:3.40.50.2300 17 139 3.1E-19 T 29-03-2018 CHH28_RS00610 173bc27985e3138b39dd2d8da318a5ba 309 SUPERFAMILY SSF53822 22 295 1.74E-49 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CHH28_RS00610 173bc27985e3138b39dd2d8da318a5ba 309 Pfam PF13407 Periplasmic binding protein domain 23 277 4.7E-45 T 29-03-2018 IPR025997 Periplasmic binding protein CHH28_RS00610 173bc27985e3138b39dd2d8da318a5ba 309 Gene3D G3DSA:3.40.50.2300 140 305 2.8E-25 T 29-03-2018 CHH28_RS13065 e4df5ac598456c20620f53a69ad0922b 349 Gene3D G3DSA:3.40.50.2000 107 344 1.8E-17 T 29-03-2018 CHH28_RS13065 e4df5ac598456c20620f53a69ad0922b 349 Pfam PF12038 Domain of unknown function (DUF3524) 4 172 6.4E-54 T 29-03-2018 IPR022701 Glycosyltransferase family 1, N-terminal CHH28_RS13065 e4df5ac598456c20620f53a69ad0922b 349 SUPERFAMILY SSF53756 34 320 2.72E-19 T 29-03-2018 CHH28_RS03200 d3a115e9e0b24cf58e23b72e17aa884b 207 Pfam PF00293 NUDIX domain 53 174 7.8E-16 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CHH28_RS03200 d3a115e9e0b24cf58e23b72e17aa884b 207 SUPERFAMILY SSF55811 8 201 3.25E-44 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CHH28_RS03200 d3a115e9e0b24cf58e23b72e17aa884b 207 ProSitePatterns PS00893 Nudix box signature. 94 115 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CHH28_RS03200 d3a115e9e0b24cf58e23b72e17aa884b 207 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 12 196 3.3E-48 T 29-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 CHH28_RS03200 d3a115e9e0b24cf58e23b72e17aa884b 207 Gene3D G3DSA:3.90.79.10 6 206 1.1E-40 T 29-03-2018 CHH28_RS00840 c7dc3c14cbfaaf2b7e607ea1a9272f4b 232 PIRSF PIRSF028137 1 232 1.8E-75 T 29-03-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane CHH28_RS10310 d51b5fcddbae8875890c6b155767b7b7 178 Gene3D G3DSA:3.30.700.10 11 160 1.9E-14 T 29-03-2018 CHH28_RS10310 d51b5fcddbae8875890c6b155767b7b7 178 SUPERFAMILY SSF54523 11 165 1.73E-13 T 29-03-2018 CHH28_RS10310 d51b5fcddbae8875890c6b155767b7b7 178 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 30 1.0E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS10310 d51b5fcddbae8875890c6b155767b7b7 178 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 31 1.1E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CHH28_RS15100 42995dd3a23cb5e29c1cd555f2d0c1d0 361 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 354 1.2E-137 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CHH28_RS15100 42995dd3a23cb5e29c1cd555f2d0c1d0 361 SUPERFAMILY SSF53659 3 359 3.78E-124 T 29-03-2018 CHH28_RS15100 42995dd3a23cb5e29c1cd555f2d0c1d0 361 Gene3D G3DSA:3.40.718.10 1 361 8.7E-127 T 29-03-2018 CHH28_RS15100 42995dd3a23cb5e29c1cd555f2d0c1d0 361 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 245 264 - T 29-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CHH28_RS15100 42995dd3a23cb5e29c1cd555f2d0c1d0 361 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 358 52.522 T 29-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CHH28_RS15100 42995dd3a23cb5e29c1cd555f2d0c1d0 361 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 353 1.2E-156 T 29-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CHH28_RS15100 42995dd3a23cb5e29c1cd555f2d0c1d0 361 SMART SM01329 4 354 6.4E-207 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CHH28_RS12450 b7e5b5b35cf0bf633b13bbdfdb88615f 453 Gene3D G3DSA:1.20.1250.20 247 453 4.2E-15 T 29-03-2018 CHH28_RS12450 b7e5b5b35cf0bf633b13bbdfdb88615f 453 SUPERFAMILY SSF103473 11 448 6.67E-36 T 29-03-2018 IPR020846 Major facilitator superfamily domain CHH28_RS12450 b7e5b5b35cf0bf633b13bbdfdb88615f 453 Pfam PF07690 Major Facilitator Superfamily 54 402 9.6E-24 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CHH28_RS12450 b7e5b5b35cf0bf633b13bbdfdb88615f 453 Gene3D G3DSA:1.20.1250.20 2 217 3.3E-22 T 29-03-2018 CHH28_RS07330 971b3a52781628ac0144cf3e0713dfab 321 PRINTS PR00721 Stomatin signature 135 158 5.2E-30 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CHH28_RS07330 971b3a52781628ac0144cf3e0713dfab 321 PRINTS PR00721 Stomatin signature 115 132 5.2E-30 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CHH28_RS07330 971b3a52781628ac0144cf3e0713dfab 321 PRINTS PR00721 Stomatin signature 178 199 5.2E-30 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CHH28_RS07330 971b3a52781628ac0144cf3e0713dfab 321 PRINTS PR00721 Stomatin signature 159 177 5.2E-30 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CHH28_RS07330 971b3a52781628ac0144cf3e0713dfab 321 PRINTS PR00721 Stomatin signature 80 101 5.2E-30 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CHH28_RS07330 971b3a52781628ac0144cf3e0713dfab 321 Pfam PF01145 SPFH domain / Band 7 family 30 199 1.4E-31 T 29-03-2018 IPR001107 Band 7 domain CHH28_RS07330 971b3a52781628ac0144cf3e0713dfab 321 SUPERFAMILY SSF117892 56 190 4.32E-43 T 29-03-2018 IPR001107 Band 7 domain CHH28_RS07330 971b3a52781628ac0144cf3e0713dfab 321 Pfam PF16200 C-terminal region of band_7 248 310 4.7E-16 T 29-03-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 CHH28_RS07330 971b3a52781628ac0144cf3e0713dfab 321 SMART SM00244 25 183 5.9E-65 T 29-03-2018 IPR001107 Band 7 domain CHH28_RS09825 404c988ce9cac960b9eb1fc27825b680 492 Gene3D G3DSA:3.50.50.60 2 337 4.7E-18 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS09825 404c988ce9cac960b9eb1fc27825b680 492 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 2 491 50.399 T 29-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CHH28_RS09825 404c988ce9cac960b9eb1fc27825b680 492 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 5 491 7.6E-233 T 29-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CHH28_RS09825 404c988ce9cac960b9eb1fc27825b680 492 SUPERFAMILY SSF51905 3 323 3.89E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS09825 404c988ce9cac960b9eb1fc27825b680 492 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 6 487 1.4E-208 T 29-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CHH28_RS00660 6b03f0fa8b8056b5f1ce48e1f5c44015 76 Gene3D G3DSA:2.30.30.320 2 76 2.0E-26 T 29-03-2018 IPR023387 DUF1653-like domain CHH28_RS00660 6b03f0fa8b8056b5f1ce48e1f5c44015 76 Pfam PF07866 Protein of unknown function (DUF1653) 9 68 5.9E-29 T 29-03-2018 IPR023387 DUF1653-like domain CHH28_RS18205 5bb9d13d4322cc54638252329c5733a8 247 Gene3D G3DSA:3.40.630.30 35 240 3.0E-10 T 29-03-2018 CHH28_RS18205 5bb9d13d4322cc54638252329c5733a8 247 SUPERFAMILY SSF55729 85 237 1.15E-12 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS16295 d7eac35b6958db079b0513359bc97971 238 PIRSF PIRSF006232 1 236 2.5E-52 T 29-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CHH28_RS16295 d7eac35b6958db079b0513359bc97971 238 Gene3D G3DSA:2.60.120.10 134 234 3.0E-20 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS16295 d7eac35b6958db079b0513359bc97971 238 Gene3D G3DSA:2.60.120.10 12 133 5.3E-47 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS16295 d7eac35b6958db079b0513359bc97971 238 Pfam PF02678 Pirin 8 119 2.6E-35 T 29-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CHH28_RS16295 d7eac35b6958db079b0513359bc97971 238 SUPERFAMILY SSF51182 1 234 7.59E-70 T 29-03-2018 IPR011051 RmlC-like cupin domain CHH28_RS10435 2ea27d874b55c982a08796204866e313 650 Pfam PF01391 Collagen triple helix repeat (20 copies) 184 237 1.1E-6 T 29-03-2018 IPR008160 Collagen triple helix repeat CHH28_RS10435 2ea27d874b55c982a08796204866e313 650 SMART SM00198 304 489 4.2E-10 T 29-03-2018 IPR014044 CAP domain CHH28_RS10435 2ea27d874b55c982a08796204866e313 650 Pfam PF00188 Cysteine-rich secretory protein family 310 464 6.5E-20 T 29-03-2018 IPR014044 CAP domain CHH28_RS10435 2ea27d874b55c982a08796204866e313 650 Gene3D G3DSA:3.40.33.10 293 531 7.0E-35 T 29-03-2018 IPR014044 CAP domain CHH28_RS10435 2ea27d874b55c982a08796204866e313 650 SUPERFAMILY SSF55797 296 494 2.49E-29 T 29-03-2018 IPR014044 CAP domain CHH28_RS12100 3b0021a31b25d6a554a34104ad7cd56f 84 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 4.2E-28 T 29-03-2018 IPR021250 Protein of unknown function DUF2789 CHH28_RS09975 595e20f583f897cbe373e7e5b3577c38 132 Pfam PF13586 Transposase DDE domain 44 130 8.1E-12 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS09975 595e20f583f897cbe373e7e5b3577c38 132 Gene3D G3DSA:3.90.350.10 1 118 1.4E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS13640 f52406f0c8c9235ad2475b2cc45aaa0d 247 SUPERFAMILY SSF51161 120 238 2.09E-30 T 29-03-2018 IPR011004 Trimeric LpxA-like CHH28_RS13640 f52406f0c8c9235ad2475b2cc45aaa0d 247 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 191 219 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CHH28_RS13640 f52406f0c8c9235ad2475b2cc45aaa0d 247 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 183 217 1.1E-6 T 29-03-2018 IPR001451 Hexapeptide repeat CHH28_RS13640 f52406f0c8c9235ad2475b2cc45aaa0d 247 Gene3D G3DSA:2.160.10.10 75 235 9.8E-30 T 29-03-2018 CHH28_RS10820 e5b503d5fa7c65debdc529179aea7c20 299 SUPERFAMILY SSF103481 191 287 9.81E-9 T 29-03-2018 CHH28_RS10820 e5b503d5fa7c65debdc529179aea7c20 299 Pfam PF00892 EamA-like transporter family 149 285 4.2E-11 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS10820 e5b503d5fa7c65debdc529179aea7c20 299 Pfam PF00892 EamA-like transporter family 6 134 1.6E-12 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS10820 e5b503d5fa7c65debdc529179aea7c20 299 SUPERFAMILY SSF103481 35 137 2.75E-14 T 29-03-2018 CHH28_RS08125 ad0dc7dbc528f8b6170cac99aff33e85 221 Gene3D G3DSA:1.10.760.10 131 220 5.1E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS08125 ad0dc7dbc528f8b6170cac99aff33e85 221 Gene3D G3DSA:1.10.760.10 26 130 1.8E-14 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS08125 ad0dc7dbc528f8b6170cac99aff33e85 221 SUPERFAMILY SSF46626 54 129 4.41E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS08125 ad0dc7dbc528f8b6170cac99aff33e85 221 SUPERFAMILY SSF46626 141 220 7.02E-17 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS08125 ad0dc7dbc528f8b6170cac99aff33e85 221 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 141 217 1.0E-9 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS08125 ad0dc7dbc528f8b6170cac99aff33e85 221 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 55 127 3.2E-5 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CHH28_RS04460 8308d36013d17ab04fbe2e9eaba5630c 34 Gene3D G3DSA:3.40.50.1000 1 34 6.0E-4 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS08570 aafa2e3185b4aacd16500d1f0c4c22ba 278 PIRSF PIRSF038471 2 274 1.9E-71 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CHH28_RS08570 aafa2e3185b4aacd16500d1f0c4c22ba 278 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 9 265 1.8E-52 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CHH28_RS08570 aafa2e3185b4aacd16500d1f0c4c22ba 278 Pfam PF04085 rod shape-determining protein MreC 114 258 1.3E-34 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CHH28_RS15065 9654ed7dd9809972b1dd10948b712dbf 430 Gene3D G3DSA:3.40.1190.10 11 297 2.9E-64 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CHH28_RS15065 9654ed7dd9809972b1dd10948b712dbf 430 TIGRFAM TIGR01499 folC: bifunctional protein FolC 40 420 7.4E-86 T 29-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CHH28_RS15065 9654ed7dd9809972b1dd10948b712dbf 430 SUPERFAMILY SSF53623 20 292 5.34E-76 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CHH28_RS15065 9654ed7dd9809972b1dd10948b712dbf 430 Pfam PF08245 Mur ligase middle domain 62 213 2.3E-7 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CHH28_RS15065 9654ed7dd9809972b1dd10948b712dbf 430 SUPERFAMILY SSF53244 299 423 9.61E-18 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CHH28_RS15065 9654ed7dd9809972b1dd10948b712dbf 430 Gene3D G3DSA:3.90.190.20 299 429 6.2E-17 T 29-03-2018 CHH28_RS15065 9654ed7dd9809972b1dd10948b712dbf 430 PIRSF PIRSF001563 15 426 7.6E-87 T 29-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CHH28_RS04360 6eda816fe64b56e69e4144af637fc487 216 SUPERFAMILY SSF51182 7 122 3.61E-30 T 29-03-2018 IPR011051 RmlC-like cupin domain CHH28_RS04360 6eda816fe64b56e69e4144af637fc487 216 Gene3D G3DSA:2.60.120.10 2 129 1.5E-21 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS04360 6eda816fe64b56e69e4144af637fc487 216 Pfam PF12973 ChrR Cupin-like domain 22 112 8.4E-36 T 29-03-2018 IPR025979 ChrR-like cupin domain CHH28_RS04555 d74d6d85a77eeae390f18e7c5a8b57c8 346 Gene3D G3DSA:1.50.10.10 22 342 3.3E-67 T 29-03-2018 CHH28_RS04555 d74d6d85a77eeae390f18e7c5a8b57c8 346 SUPERFAMILY SSF48208 11 339 1.21E-70 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CHH28_RS04555 d74d6d85a77eeae390f18e7c5a8b57c8 346 PRINTS PR00735 Glycosyl hydrolase family 8 signature 114 132 8.4E-19 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CHH28_RS04555 d74d6d85a77eeae390f18e7c5a8b57c8 346 PRINTS PR00735 Glycosyl hydrolase family 8 signature 56 69 8.4E-19 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CHH28_RS04555 d74d6d85a77eeae390f18e7c5a8b57c8 346 PRINTS PR00735 Glycosyl hydrolase family 8 signature 219 230 8.4E-19 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CHH28_RS04555 d74d6d85a77eeae390f18e7c5a8b57c8 346 PRINTS PR00735 Glycosyl hydrolase family 8 signature 244 253 8.4E-19 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CHH28_RS04555 d74d6d85a77eeae390f18e7c5a8b57c8 346 PRINTS PR00735 Glycosyl hydrolase family 8 signature 325 339 8.4E-19 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CHH28_RS04555 d74d6d85a77eeae390f18e7c5a8b57c8 346 Pfam PF01270 Glycosyl hydrolases family 8 17 338 6.8E-68 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CHH28_RS00980 2a2f811fa6ee5350d4c732f81ee77c74 114 Pfam PF06291 Bor protein 29 103 3.1E-15 T 29-03-2018 IPR010438 Bor GO:0009279 CHH28_RS18390 43a70f59e9f2ea2e6a289c8160391a59 118 SUPERFAMILY SSF52833 41 118 2.76E-11 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS18390 43a70f59e9f2ea2e6a289c8160391a59 118 Pfam PF00462 Glutaredoxin 47 97 6.8E-5 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CHH28_RS18390 43a70f59e9f2ea2e6a289c8160391a59 118 Gene3D G3DSA:3.40.30.10 20 118 3.2E-8 T 29-03-2018 CHH28_RS03740 f324ce55c210c266c6e88675e650287a 286 SUPERFAMILY SSF53474 31 270 1.57E-16 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS03740 f324ce55c210c266c6e88675e650287a 286 Gene3D G3DSA:3.40.50.1820 27 283 6.6E-15 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS09650 a618587c7ea1ff488b6cbe13ad412a01 245 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 31 240 1.4E-63 T 29-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase CHH28_RS09650 a618587c7ea1ff488b6cbe13ad412a01 245 Gene3D G3DSA:3.60.140.10 3 245 1.1E-73 T 29-03-2018 CHH28_RS09650 a618587c7ea1ff488b6cbe13ad412a01 245 SUPERFAMILY SSF64438 11 241 5.86E-65 T 29-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CHH28_RS09650 a618587c7ea1ff488b6cbe13ad412a01 245 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 33 241 1.7E-50 T 29-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase CHH28_RS05755 d7aea39a46e7573d81ac78e641fa54f7 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 297 9.5E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS05755 d7aea39a46e7573d81ac78e641fa54f7 302 Gene3D G3DSA:1.10.3720.10 14 302 7.6E-46 T 29-03-2018 CHH28_RS05755 d7aea39a46e7573d81ac78e641fa54f7 302 SUPERFAMILY SSF161098 11 293 5.7E-57 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS00780 4d5ed278550dc935d9d801c226bde791 237 Gene3D G3DSA:3.90.1340.10 21 92 1.2E-15 T 29-03-2018 IPR011083 Phage tail collar domain CHH28_RS00780 4d5ed278550dc935d9d801c226bde791 237 Pfam PF07484 Phage Tail Collar Domain 32 88 4.2E-19 T 29-03-2018 IPR011083 Phage tail collar domain CHH28_RS00780 4d5ed278550dc935d9d801c226bde791 237 SUPERFAMILY SSF88874 25 171 1.1E-24 T 29-03-2018 CHH28_RS03160 e83bd7f8d32f73c66fb4b573fd269b48 166 Gene3D G3DSA:3.30.420.10 6 165 4.1E-14 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS03160 e83bd7f8d32f73c66fb4b573fd269b48 166 SUPERFAMILY SSF53098 4 161 5.9E-17 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS12465 4f1fa41c822b203af29ec0983c4c2440 362 Gene3D G3DSA:1.10.287.470 91 147 1.9E-12 T 29-03-2018 CHH28_RS12465 4f1fa41c822b203af29ec0983c4c2440 362 Gene3D G3DSA:2.40.50.100 148 341 3.9E-7 T 29-03-2018 CHH28_RS12465 4f1fa41c822b203af29ec0983c4c2440 362 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 356 4.3E-70 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CHH28_RS12465 4f1fa41c822b203af29ec0983c4c2440 362 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 262 2.8E-9 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CHH28_RS12465 4f1fa41c822b203af29ec0983c4c2440 362 SUPERFAMILY SSF111369 47 269 4.97E-32 T 29-03-2018 CHH28_RS05770 22f1cb7e4a6187a0c46c358dabaec356 360 PIRSF PIRSF019574 2 360 1.0E-118 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05770 22f1cb7e4a6187a0c46c358dabaec356 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 25 41 6.2E-49 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05770 22f1cb7e4a6187a0c46c358dabaec356 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 209 228 6.2E-49 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05770 22f1cb7e4a6187a0c46c358dabaec356 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 172 191 6.2E-49 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05770 22f1cb7e4a6187a0c46c358dabaec356 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 118 134 6.2E-49 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05770 22f1cb7e4a6187a0c46c358dabaec356 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 304 330 6.2E-49 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05770 22f1cb7e4a6187a0c46c358dabaec356 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 41 62 6.2E-49 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05770 22f1cb7e4a6187a0c46c358dabaec356 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 259 278 6.2E-49 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05770 22f1cb7e4a6187a0c46c358dabaec356 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 68 82 6.2E-49 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05770 22f1cb7e4a6187a0c46c358dabaec356 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 149 163 6.2E-49 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CHH28_RS05770 22f1cb7e4a6187a0c46c358dabaec356 360 SUPERFAMILY SSF53850 19 357 1.63E-92 T 29-03-2018 CHH28_RS05770 22f1cb7e4a6187a0c46c358dabaec356 360 Pfam PF13416 Bacterial extracellular solute-binding protein 36 325 3.3E-29 T 29-03-2018 CHH28_RS05770 22f1cb7e4a6187a0c46c358dabaec356 360 Gene3D G3DSA:3.40.190.10 142 298 3.4E-31 T 29-03-2018 CHH28_RS05770 22f1cb7e4a6187a0c46c358dabaec356 360 Gene3D G3DSA:3.40.190.10 13 141 1.1E-16 T 29-03-2018 CHH28_RS16945 3518ecada0a32bd727325f5bc5d86136 207 SUPERFAMILY SSF51197 6 200 4.39E-54 T 29-03-2018 CHH28_RS16945 3518ecada0a32bd727325f5bc5d86136 207 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 30 198 3.6E-28 T 29-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CHH28_RS16945 3518ecada0a32bd727325f5bc5d86136 207 Gene3D G3DSA:2.60.120.590 19 202 5.6E-42 T 29-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CHH28_RS04365 1c02f105230b7960f9e6190e5a90b465 279 Gene3D G3DSA:1.20.1260.10 34 275 1.2E-4 T 29-03-2018 IPR012347 Ferritin-related CHH28_RS04365 1c02f105230b7960f9e6190e5a90b465 279 Pfam PF10118 Predicted metal-dependent hydrolase 16 261 2.0E-88 T 29-03-2018 IPR016516 Uncharacterised conserved protein UCP07580 CHH28_RS04365 1c02f105230b7960f9e6190e5a90b465 279 PIRSF PIRSF007580 1 278 3.9E-82 T 29-03-2018 IPR016516 Uncharacterised conserved protein UCP07580 CHH28_RS13760 00bae47450f5e276c936abffa8931543 451 PIRSF PIRSF006603 5 447 1.1E-55 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CHH28_RS13760 00bae47450f5e276c936abffa8931543 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 5.1E-84 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CHH28_RS13760 00bae47450f5e276c936abffa8931543 451 Pfam PF01554 MatE 17 175 6.8E-23 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CHH28_RS13760 00bae47450f5e276c936abffa8931543 451 Pfam PF01554 MatE 243 404 2.7E-33 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CHH28_RS16125 5f73d5be592bbd777051494bf16dadb2 200 Gene3D G3DSA:3.40.50.360 1 180 1.7E-29 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS16125 5f73d5be592bbd777051494bf16dadb2 200 Pfam PF02525 Flavodoxin-like fold 3 170 6.5E-40 T 29-03-2018 IPR003680 Flavodoxin-like fold CHH28_RS16125 5f73d5be592bbd777051494bf16dadb2 200 SUPERFAMILY SSF52218 1 177 3.14E-46 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS07025 4499451552d7fd7c9e53eda1758ebc35 231 Pfam PF07722 Peptidase C26 47 202 5.1E-44 T 29-03-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 CHH28_RS07025 4499451552d7fd7c9e53eda1758ebc35 231 Gene3D G3DSA:3.40.50.880 22 228 7.7E-34 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS07025 4499451552d7fd7c9e53eda1758ebc35 231 SUPERFAMILY SSF52317 6 223 1.99E-34 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS06470 4b91fcf94d0824570b149dceb893ba43 123 Pfam PF00719 Inorganic pyrophosphatase 30 84 2.2E-7 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CHH28_RS06470 4b91fcf94d0824570b149dceb893ba43 123 SUPERFAMILY SSF50324 4 111 3.01E-16 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CHH28_RS06470 4b91fcf94d0824570b149dceb893ba43 123 Gene3D G3DSA:3.90.80.10 4 109 3.5E-9 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CHH28_RS09415 8f071348469ae11907d4aa55bd2ead2f 339 Gene3D G3DSA:3.30.1330.60 114 304 1.2E-31 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS09415 8f071348469ae11907d4aa55bd2ead2f 339 SUPERFAMILY SSF103088 165 271 1.23E-20 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS09415 8f071348469ae11907d4aa55bd2ead2f 339 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 16 65 5.9E-16 T 29-03-2018 IPR025713 Motility protein B, N-terminal domain CHH28_RS09415 8f071348469ae11907d4aa55bd2ead2f 339 Pfam PF00691 OmpA family 167 259 3.6E-14 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS15350 ef23d43a95382bd8170452dcc310b511 309 Pfam PF01551 Peptidase family M23 174 272 2.2E-19 T 29-03-2018 IPR016047 Peptidase M23 CHH28_RS15350 ef23d43a95382bd8170452dcc310b511 309 Gene3D G3DSA:2.70.70.10 139 290 5.7E-29 T 29-03-2018 CHH28_RS15350 ef23d43a95382bd8170452dcc310b511 309 Pfam PF13511 Domain of unknown function (DUF4124) 18 59 1.2E-8 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 CHH28_RS15350 ef23d43a95382bd8170452dcc310b511 309 SUPERFAMILY SSF51261 150 273 4.53E-28 T 29-03-2018 IPR011055 Duplicated hybrid motif CHH28_RS12650 512e6db405226c677ae502572a40d082 236 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 232 9.8E-75 T 29-03-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CHH28_RS12650 512e6db405226c677ae502572a40d082 236 Pfam PF01259 SAICAR synthetase 7 229 1.5E-60 T 29-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CHH28_RS12650 512e6db405226c677ae502572a40d082 236 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 29-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CHH28_RS12650 512e6db405226c677ae502572a40d082 236 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 29-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CHH28_RS12650 512e6db405226c677ae502572a40d082 236 Gene3D G3DSA:3.30.200.20 1 93 1.1E-27 T 29-03-2018 CHH28_RS12650 512e6db405226c677ae502572a40d082 236 Gene3D G3DSA:3.30.470.20 94 220 3.8E-45 T 29-03-2018 CHH28_RS12650 512e6db405226c677ae502572a40d082 236 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 30.775 T 29-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CHH28_RS12650 512e6db405226c677ae502572a40d082 236 SUPERFAMILY SSF56104 2 232 2.84E-78 T 29-03-2018 CHH28_RS11715 cc8394f541d4410027c5506b73870a07 421 Pfam PF01384 Phosphate transporter family 26 409 4.4E-109 T 29-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 CHH28_RS18285 bc0b2b35150957a980e9ee9eee3d3e7e 455 Gene3D G3DSA:2.50.20.10 160 451 5.8E-53 T 29-03-2018 CHH28_RS18285 bc0b2b35150957a980e9ee9eee3d3e7e 455 Pfam PF07044 Protein of unknown function (DUF1329) 84 450 3.7E-157 T 29-03-2018 IPR010752 Protein of unknown function DUF1329 CHH28_RS08140 d417451dfad517a7cf42f41982229ab2 474 Pfam PF16148 Domain of unknown function (DUF4856) 39 392 7.5E-18 T 29-03-2018 IPR032331 Protein of unknown function DUF4856 CHH28_RS05680 752d7bba1d84aedda74cfe51556bea71 258 Gene3D G3DSA:3.60.20.10 1 257 1.9E-42 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS05680 752d7bba1d84aedda74cfe51556bea71 258 SUPERFAMILY SSF56235 2 251 2.19E-49 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS05680 752d7bba1d84aedda74cfe51556bea71 258 Pfam PF13230 Glutamine amidotransferases class-II 1 256 1.3E-111 T 29-03-2018 IPR026869 Putative glutamine amidotransferase type 2 CHH28_RS02960 38882a070d9c4054f0aafe413b36a21c 158 SUPERFAMILY SSF52374 1 155 2.28E-43 T 29-03-2018 CHH28_RS02960 38882a070d9c4054f0aafe413b36a21c 158 Gene3D G3DSA:3.40.50.620 1 158 6.4E-38 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS02960 38882a070d9c4054f0aafe413b36a21c 158 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 35.792 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CHH28_RS02960 38882a070d9c4054f0aafe413b36a21c 158 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 58 7.9E-18 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CHH28_RS02960 38882a070d9c4054f0aafe413b36a21c 158 Pfam PF01467 Cytidylyltransferase-like 5 133 7.7E-20 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CHH28_RS02960 38882a070d9c4054f0aafe413b36a21c 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.5E-49 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CHH28_RS02960 38882a070d9c4054f0aafe413b36a21c 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.5E-49 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CHH28_RS02960 38882a070d9c4054f0aafe413b36a21c 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 1.5E-49 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CHH28_RS02960 38882a070d9c4054f0aafe413b36a21c 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 1.5E-49 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CHH28_RS02960 38882a070d9c4054f0aafe413b36a21c 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 1.5E-49 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CHH28_RS02960 38882a070d9c4054f0aafe413b36a21c 158 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 156 8.4E-59 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CHH28_RS11085 b091eaebf96ef34816e98b05271cdb9a 282 SUPERFAMILY SSF109604 13 257 6.67E-57 T 29-03-2018 CHH28_RS11085 b091eaebf96ef34816e98b05271cdb9a 282 Gene3D G3DSA:1.10.3210.10 1 214 2.2E-40 T 29-03-2018 CHH28_RS11085 b091eaebf96ef34816e98b05271cdb9a 282 Pfam PF08668 HDOD domain 23 203 8.5E-45 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD CHH28_RS11470 07785ff4eb4e8d40aa16edbb717dfb95 281 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 233 259 - T 29-03-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 CHH28_RS11470 07785ff4eb4e8d40aa16edbb717dfb95 281 Pfam PF01148 Cytidylyltransferase family 3 273 1.7E-61 T 29-03-2018 CHH28_RS04175 4ccf724388ab5edd8b6fe7099419b200 131 SUPERFAMILY SSF46955 8 115 6.96E-25 T 29-03-2018 IPR009061 Putative DNA-binding domain CHH28_RS04175 4ccf724388ab5edd8b6fe7099419b200 131 Gene3D G3DSA:1.10.1660.10 4 61 3.2E-19 T 29-03-2018 CHH28_RS04175 4ccf724388ab5edd8b6fe7099419b200 131 Gene3D G3DSA:1.10.1660.10 62 131 2.1E-12 T 29-03-2018 CHH28_RS04175 4ccf724388ab5edd8b6fe7099419b200 131 Pfam PF13411 MerR HTH family regulatory protein 9 74 1.1E-15 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS04175 4ccf724388ab5edd8b6fe7099419b200 131 SMART SM00422 9 76 2.2E-19 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS18815 befbba38c504cf373c0f95429a7c4650 156 Gene3D G3DSA:1.10.287.620 79 156 5.6E-5 T 29-03-2018 CHH28_RS18815 befbba38c504cf373c0f95429a7c4650 156 Pfam PF02050 Flagellar FliJ protein 27 148 1.8E-23 T 29-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CHH28_RS18815 befbba38c504cf373c0f95429a7c4650 156 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 13 147 1.4E-22 T 29-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CHH28_RS04260 f7c079028868e235c26f4eb441cdc8bb 300 Gene3D G3DSA:3.20.20.80 38 291 1.2E-5 T 29-03-2018 CHH28_RS02090 95a3b761a733c724cc03e430e09232a8 149 Pfam PF02517 CAAX protease self-immunity 51 139 4.6E-14 T 29-03-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 CHH28_RS02280 4c9f98af05d2b4660a8ab8ed7db50f1a 135 Gene3D G3DSA:3.90.1590.10 1 134 2.9E-38 T 29-03-2018 CHH28_RS02280 4c9f98af05d2b4660a8ab8ed7db50f1a 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 113 1.3E-21 T 29-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CHH28_RS02280 4c9f98af05d2b4660a8ab8ed7db50f1a 135 SUPERFAMILY SSF51316 1 133 4.08E-45 T 29-03-2018 IPR011057 Mss4-like CHH28_RS15925 408a71b4f16f81e946dfcb87e880a6ea 73 Pfam PF06945 Protein of unknown function (DUF1289) 6 51 7.5E-20 T 29-03-2018 IPR010710 Protein of unknown function DUF1289 CHH28_RS02270 1d8217974a2db1a38d8cf2f40fe2cca0 179 Gene3D G3DSA:2.40.33.20 1 179 1.0E-35 T 29-03-2018 CHH28_RS02270 1d8217974a2db1a38d8cf2f40fe2cca0 179 SUPERFAMILY SSF50800 1 168 2.56E-36 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain CHH28_RS02270 1d8217974a2db1a38d8cf2f40fe2cca0 179 Pfam PF03473 MOSC domain 55 164 3.9E-5 T 29-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CHH28_RS04825 2fb03915609b937ff6230934b2fc556f 449 Pfam PF01554 MatE 25 185 8.4E-26 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CHH28_RS04825 2fb03915609b937ff6230934b2fc556f 449 Pfam PF01554 MatE 254 402 3.3E-9 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CHH28_RS04825 2fb03915609b937ff6230934b2fc556f 449 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 414 9.0E-70 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CHH28_RS18510 6de887405038ddd287f9c700b73d101e 260 Gene3D G3DSA:1.20.1050.10 97 241 1.2E-11 T 29-03-2018 CHH28_RS18510 6de887405038ddd287f9c700b73d101e 260 SUPERFAMILY SSF47616 148 216 1.25E-11 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CHH28_RS18510 6de887405038ddd287f9c700b73d101e 260 SUPERFAMILY SSF47616 74 116 1.25E-11 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CHH28_RS18510 6de887405038ddd287f9c700b73d101e 260 SUPERFAMILY SSF52833 1 99 2.53E-23 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS18510 6de887405038ddd287f9c700b73d101e 260 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 3.2E-20 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CHH28_RS18510 6de887405038ddd287f9c700b73d101e 260 Gene3D G3DSA:3.40.30.10 1 96 5.9E-22 T 29-03-2018 CHH28_RS01840 57b943efe81cca301b4a6f41c605308e 450 SUPERFAMILY SSF51004 48 224 1.07E-10 T 29-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain CHH28_RS01840 57b943efe81cca301b4a6f41c605308e 450 SUPERFAMILY SSF51004 274 428 1.07E-10 T 29-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain CHH28_RS01840 57b943efe81cca301b4a6f41c605308e 450 Gene3D G3DSA:2.130.10.10 341 438 0.0035 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS01840 57b943efe81cca301b4a6f41c605308e 450 Gene3D G3DSA:2.130.10.10 21 340 6.7E-9 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS02325 873d075a77ef42034171f171ec2f63aa 132 Gene3D G3DSA:2.60.120.10 8 128 2.8E-20 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS02325 873d075a77ef42034171f171ec2f63aa 132 Hamap MF_01255 L-ectoine synthase [ectC]. 1 127 38.418 T 29-03-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CHH28_RS02325 873d075a77ef42034171f171ec2f63aa 132 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 120 5.0E-47 T 29-03-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CHH28_RS02325 873d075a77ef42034171f171ec2f63aa 132 Pfam PF06339 Ectoine synthase 1 126 2.1E-62 T 29-03-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CHH28_RS02325 873d075a77ef42034171f171ec2f63aa 132 SUPERFAMILY SSF51182 17 126 1.6E-22 T 29-03-2018 IPR011051 RmlC-like cupin domain CHH28_RS00585 30ce2fecf46f5891a2ed46125b3eec38 450 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 430 450 6.6E-19 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CHH28_RS00585 30ce2fecf46f5891a2ed46125b3eec38 450 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 260 280 6.6E-19 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CHH28_RS00585 30ce2fecf46f5891a2ed46125b3eec38 450 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 17 38 6.6E-19 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CHH28_RS00585 30ce2fecf46f5891a2ed46125b3eec38 450 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 46 65 6.6E-19 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CHH28_RS00585 30ce2fecf46f5891a2ed46125b3eec38 450 SUPERFAMILY SSF161070 10 449 1.44E-129 T 29-03-2018 CHH28_RS00585 30ce2fecf46f5891a2ed46125b3eec38 450 Pfam PF00209 Sodium:neurotransmitter symporter family 153 448 7.8E-21 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CHH28_RS00585 30ce2fecf46f5891a2ed46125b3eec38 450 Pfam PF00209 Sodium:neurotransmitter symporter family 11 127 7.9E-28 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CHH28_RS00585 30ce2fecf46f5891a2ed46125b3eec38 450 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 33 47 - T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CHH28_RS02015 53ecb1c90d3b1e6e5303d996d2cef675 444 Gene3D G3DSA:1.10.510.10 9 164 5.4E-9 T 29-03-2018 CHH28_RS02015 53ecb1c90d3b1e6e5303d996d2cef675 444 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 26 431 2.8E-47 T 29-03-2018 IPR018721 Protein of unknown function DUF2252 CHH28_RS02015 53ecb1c90d3b1e6e5303d996d2cef675 444 SUPERFAMILY SSF56112 146 163 5.92E-7 T 29-03-2018 IPR011009 Protein kinase-like domain CHH28_RS02015 53ecb1c90d3b1e6e5303d996d2cef675 444 SUPERFAMILY SSF56112 36 117 5.92E-7 T 29-03-2018 IPR011009 Protein kinase-like domain CHH28_RS09210 da544ab2b7c2d01aa2d09589ac9701f3 614 Pfam PF05960 Bacterial protein of unknown function (DUF885) 62 594 4.5E-161 T 29-03-2018 IPR010281 Protein of unknown function DUF885 CHH28_RS05970 26bf57d62907d0c00356987d58544755 164 Pfam PF00466 Ribosomal protein L10 6 101 1.1E-25 T 29-03-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CHH28_RS05970 26bf57d62907d0c00356987d58544755 164 SUPERFAMILY SSF160369 5 159 3.01E-46 T 29-03-2018 CHH28_RS05970 26bf57d62907d0c00356987d58544755 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.695 T 29-03-2018 IPR022973 Ribosomal protein L10 CHH28_RS05970 26bf57d62907d0c00356987d58544755 164 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 29-03-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS13830 8985a850e38f1ac98571a8afffd43def 120 Pfam PF01219 Prokaryotic diacylglycerol kinase 15 114 7.5E-33 T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CHH28_RS13830 8985a850e38f1ac98571a8afffd43def 120 Gene3D G3DSA:1.10.3830.10 4 116 5.1E-38 T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CHH28_RS09450 6b0489cc1e8e73b65e86748c4eb929ea 160 SUPERFAMILY SSF52540 22 124 1.93E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS09450 6b0489cc1e8e73b65e86748c4eb929ea 160 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 5 136 2.2E-43 T 29-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CHH28_RS09450 6b0489cc1e8e73b65e86748c4eb929ea 160 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 6 131 1.8E-37 T 29-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CHH28_RS09450 6b0489cc1e8e73b65e86748c4eb929ea 160 Gene3D G3DSA:3.40.50.300 1 150 1.5E-48 T 29-03-2018 CHH28_RS04730 f0a4d14369dc8c742a09350268ea89bf 232 Gene3D G3DSA:3.40.50.2300 1 126 2.7E-39 T 29-03-2018 CHH28_RS04730 f0a4d14369dc8c742a09350268ea89bf 232 Pfam PF00072 Response regulator receiver domain 8 119 3.9E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS04730 f0a4d14369dc8c742a09350268ea89bf 232 SMART SM00862 153 227 2.5E-26 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS04730 f0a4d14369dc8c742a09350268ea89bf 232 Gene3D G3DSA:1.10.10.10 127 232 1.4E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04730 f0a4d14369dc8c742a09350268ea89bf 232 SMART SM00448 6 119 2.2E-46 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS04730 f0a4d14369dc8c742a09350268ea89bf 232 SUPERFAMILY SSF52172 3 128 2.13E-44 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS04730 f0a4d14369dc8c742a09350268ea89bf 232 SUPERFAMILY SSF46894 133 228 1.09E-27 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CHH28_RS04730 f0a4d14369dc8c742a09350268ea89bf 232 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 6 228 2.0E-108 T 29-03-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 CHH28_RS04730 f0a4d14369dc8c742a09350268ea89bf 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 227 2.4E-26 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CHH28_RS17770 a019aaf50645c48857a76c5b1be3acc9 604 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 63 596 2.4E-236 T 29-03-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 CHH28_RS17770 a019aaf50645c48857a76c5b1be3acc9 604 SUPERFAMILY SSF53474 236 529 2.64E-40 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS17770 a019aaf50645c48857a76c5b1be3acc9 604 Gene3D G3DSA:3.40.50.1820 215 567 6.9E-18 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS17770 a019aaf50645c48857a76c5b1be3acc9 604 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 106 279 1.3E-74 T 29-03-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 CHH28_RS18670 167918d47c53274839f328fe5be4569c 246 Pfam PF01618 MotA/TolQ/ExbB proton channel family 104 211 1.9E-20 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CHH28_RS04290 a1526c457ea7daf2dc56f670e5b8a7af 301 Pfam PF03466 LysR substrate binding domain 94 286 4.9E-22 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS04290 a1526c457ea7daf2dc56f670e5b8a7af 301 SUPERFAMILY SSF53850 94 288 1.99E-24 T 29-03-2018 CHH28_RS04290 a1526c457ea7daf2dc56f670e5b8a7af 301 Gene3D G3DSA:3.40.190.10 178 268 8.8E-14 T 29-03-2018 CHH28_RS04290 a1526c457ea7daf2dc56f670e5b8a7af 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.4E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS04290 a1526c457ea7daf2dc56f670e5b8a7af 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.4E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS04290 a1526c457ea7daf2dc56f670e5b8a7af 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.4E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS04290 a1526c457ea7daf2dc56f670e5b8a7af 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.4E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS04290 a1526c457ea7daf2dc56f670e5b8a7af 301 SUPERFAMILY SSF46785 2 85 4.52E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS04290 a1526c457ea7daf2dc56f670e5b8a7af 301 Gene3D G3DSA:3.40.190.10 95 177 1.0E-6 T 29-03-2018 CHH28_RS04290 a1526c457ea7daf2dc56f670e5b8a7af 301 Gene3D G3DSA:1.10.10.10 1 86 3.8E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS19630 cf17ce1fafd6b0b3b3cbd03a247ab38a 377 SUPERFAMILY SSF51905 5 220 4.06E-42 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS19630 cf17ce1fafd6b0b3b3cbd03a247ab38a 377 SUPERFAMILY SSF51905 325 369 4.06E-42 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS19630 cf17ce1fafd6b0b3b3cbd03a247ab38a 377 Pfam PF01266 FAD dependent oxidoreductase 7 365 7.6E-67 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CHH28_RS19630 cf17ce1fafd6b0b3b3cbd03a247ab38a 377 Gene3D G3DSA:3.30.9.10 88 178 8.5E-14 T 29-03-2018 CHH28_RS19630 cf17ce1fafd6b0b3b3cbd03a247ab38a 377 Gene3D G3DSA:3.30.9.10 179 312 6.9E-19 T 29-03-2018 CHH28_RS19630 cf17ce1fafd6b0b3b3cbd03a247ab38a 377 Gene3D G3DSA:3.50.50.60 313 368 8.0E-5 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS19235 57ab6d2142ec973505af62e616440994 577 ProSitePatterns PS01130 SLC26A transporters signature. 49 70 - T 29-03-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 CHH28_RS19235 57ab6d2142ec973505af62e616440994 577 SUPERFAMILY SSF52091 454 565 1.86E-17 T 29-03-2018 IPR002645 STAS domain CHH28_RS19235 57ab6d2142ec973505af62e616440994 577 TIGRFAM TIGR00815 sulP: sulfate permease 7 549 4.6E-135 T 29-03-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 CHH28_RS19235 57ab6d2142ec973505af62e616440994 577 Pfam PF00916 Sulfate permease family 20 403 1.6E-98 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CHH28_RS19235 57ab6d2142ec973505af62e616440994 577 Pfam PF01740 STAS domain 456 557 8.5E-17 T 29-03-2018 IPR002645 STAS domain CHH28_RS19235 57ab6d2142ec973505af62e616440994 577 Gene3D G3DSA:3.30.750.24 433 567 6.6E-28 T 29-03-2018 IPR002645 STAS domain CHH28_RS04620 703305ba585e9c5be4db667edbf9461c 422 SUPERFAMILY SSF161098 198 407 1.57E-35 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS04620 703305ba585e9c5be4db667edbf9461c 422 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 180 419 5.4E-64 T 29-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CHH28_RS04620 703305ba585e9c5be4db667edbf9461c 422 Gene3D G3DSA:1.10.3720.10 13 412 1.3E-45 T 29-03-2018 CHH28_RS04620 703305ba585e9c5be4db667edbf9461c 422 Pfam PF11812 Domain of unknown function (DUF3333) 12 153 2.0E-44 T 29-03-2018 IPR024573 Domain of unknown function DUF3333 CHH28_RS04620 703305ba585e9c5be4db667edbf9461c 422 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 220 421 2.8E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS16755 56ff1e69ef3a1e440c9d327a5456526c 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 322 1.7E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS16755 56ff1e69ef3a1e440c9d327a5456526c 324 SUPERFAMILY SSF161098 106 305 9.16E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CHH28_RS16755 56ff1e69ef3a1e440c9d327a5456526c 324 Gene3D G3DSA:1.10.3720.10 3 311 1.2E-29 T 29-03-2018 CHH28_RS09985 fa1a6d4e9059ba6eca3967f02bf3100b 208 Gene3D G3DSA:3.40.50.360 3 208 2.0E-32 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS09985 fa1a6d4e9059ba6eca3967f02bf3100b 208 SUPERFAMILY SSF52218 1 203 1.22E-44 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS09985 fa1a6d4e9059ba6eca3967f02bf3100b 208 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 205 26.536 T 29-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 CHH28_RS09985 fa1a6d4e9059ba6eca3967f02bf3100b 208 Pfam PF02525 Flavodoxin-like fold 4 193 6.2E-38 T 29-03-2018 IPR003680 Flavodoxin-like fold CHH28_RS09850 c781d614e4a05626ac3f839544dbd6d1 103 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 7 87 6.1E-21 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CHH28_RS09850 c781d614e4a05626ac3f839544dbd6d1 103 SUPERFAMILY SSF46767 8 88 3.27E-21 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CHH28_RS09850 c781d614e4a05626ac3f839544dbd6d1 103 Gene3D G3DSA:1.10.10.10 3 103 1.4E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS00060 b068e8daf771a6fb48c3634ca242889d 910 Gene3D G3DSA:2.60.120.260 183 339 3.9E-16 T 29-03-2018 IPR008979 Galactose-binding domain-like CHH28_RS00060 b068e8daf771a6fb48c3634ca242889d 910 Gene3D G3DSA:2.60.120.260 21 175 3.3E-14 T 29-03-2018 IPR008979 Galactose-binding domain-like CHH28_RS00060 b068e8daf771a6fb48c3634ca242889d 910 SUPERFAMILY SSF49899 348 598 1.83E-23 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CHH28_RS00060 b068e8daf771a6fb48c3634ca242889d 910 Gene3D G3DSA:2.60.120.200 340 603 2.2E-31 T 29-03-2018 CHH28_RS12005 da1a09dcb1fd0562fa2fa385a3dcf111 444 Pfam PF11973 NQRA C-terminal domain 260 308 8.0E-21 T 29-03-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 CHH28_RS12005 da1a09dcb1fd0562fa2fa385a3dcf111 444 Gene3D G3DSA:2.40.50.100 57 124 2.2E-5 T 29-03-2018 CHH28_RS12005 da1a09dcb1fd0562fa2fa385a3dcf111 444 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 444 45.848 T 29-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 CHH28_RS12005 da1a09dcb1fd0562fa2fa385a3dcf111 444 Gene3D G3DSA:3.90.1170.30 38 56 0.043 T 29-03-2018 CHH28_RS12005 da1a09dcb1fd0562fa2fa385a3dcf111 444 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 255 2.4E-112 T 29-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 CHH28_RS12005 da1a09dcb1fd0562fa2fa385a3dcf111 444 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 444 3.4E-177 T 29-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 CHH28_RS10865 feec82c05a0cdc03682e0d9dedc2f4e7 407 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 86 2.3E-10 T 29-03-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger CHH28_RS10865 feec82c05a0cdc03682e0d9dedc2f4e7 407 Pfam PF01610 Transposase 156 393 7.0E-47 T 29-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CHH28_RS16040 8376adc40c07d85b25dcb9411fd86369 448 Pfam PF02646 RmuC family 125 420 6.3E-103 T 29-03-2018 IPR003798 DNA recombination RmuC CHH28_RS16040 8376adc40c07d85b25dcb9411fd86369 448 Gene3D G3DSA:1.20.5.340 134 285 2.8E-17 T 29-03-2018 CHH28_RS14205 3cc886f8d2ffea85ba2514687837a975 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 5.1E-14 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CHH28_RS14205 3cc886f8d2ffea85ba2514687837a975 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 5.1E-14 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CHH28_RS14205 3cc886f8d2ffea85ba2514687837a975 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 5.1E-14 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CHH28_RS14205 3cc886f8d2ffea85ba2514687837a975 111 SMART SM00418 15 93 2.1E-20 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CHH28_RS14205 3cc886f8d2ffea85ba2514687837a975 111 Pfam PF01022 Bacterial regulatory protein, arsR family 22 67 2.1E-15 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CHH28_RS14205 3cc886f8d2ffea85ba2514687837a975 111 SUPERFAMILY SSF46785 3 92 1.97E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS14205 3cc886f8d2ffea85ba2514687837a975 111 Gene3D G3DSA:1.10.10.10 1 103 2.6E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS10840 305e27289330e67551024a0868b63bd1 260 Gene3D G3DSA:3.30.420.10 98 260 2.1E-36 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS10840 305e27289330e67551024a0868b63bd1 260 Pfam PF13683 Integrase core domain 187 252 4.1E-31 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CHH28_RS10840 305e27289330e67551024a0868b63bd1 260 Pfam PF13276 HTH-like domain 33 88 2.6E-10 T 29-03-2018 IPR025948 HTH-like domain CHH28_RS10840 305e27289330e67551024a0868b63bd1 260 SUPERFAMILY SSF53098 99 254 1.26E-39 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS05380 80ebc0b4c4181b6a435fe5adc8de2938 158 Gene3D G3DSA:3.30.70.640 2 158 2.4E-64 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CHH28_RS05380 80ebc0b4c4181b6a435fe5adc8de2938 158 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 34.668 T 29-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 CHH28_RS05380 80ebc0b4c4181b6a435fe5adc8de2938 158 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 4.3E-63 T 29-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 CHH28_RS05380 80ebc0b4c4181b6a435fe5adc8de2938 158 Pfam PF01967 MoaC family 15 150 2.2E-51 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CHH28_RS05380 80ebc0b4c4181b6a435fe5adc8de2938 158 SUPERFAMILY SSF55040 11 155 3.14E-58 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CHH28_RS09830 2be80250da5d578cb64aab34ec63e950 135 SMART SM01034 3 95 9.1E-37 T 29-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 CHH28_RS09830 2be80250da5d578cb64aab34ec63e950 135 Pfam PF04940 Sensors of blue-light using FAD 3 94 1.1E-28 T 29-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 CHH28_RS09830 2be80250da5d578cb64aab34ec63e950 135 SUPERFAMILY SSF54975 3 132 3.05E-37 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CHH28_RS12025 afab8607c79f9b8b19113a5112b50337 204 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 202 1.5E-56 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CHH28_RS12025 afab8607c79f9b8b19113a5112b50337 204 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 202 8.6E-103 T 29-03-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CHH28_RS12025 afab8607c79f9b8b19113a5112b50337 204 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 204 29.446 T 29-03-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CHH28_RS12025 afab8607c79f9b8b19113a5112b50337 204 PIRSF PIRSF006102 1 204 2.1E-59 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CHH28_RS08615 7809e3ad11ac8d13c0fa612666c1e2a4 286 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 284 40.447 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 CHH28_RS08615 7809e3ad11ac8d13c0fa612666c1e2a4 286 Pfam PF03668 P-loop ATPase protein family 1 284 9.0E-103 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 CHH28_RS08615 7809e3ad11ac8d13c0fa612666c1e2a4 286 PIRSF PIRSF005052 1 286 1.4E-112 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 CHH28_RS08615 7809e3ad11ac8d13c0fa612666c1e2a4 286 SUPERFAMILY SSF52540 1 152 8.05E-15 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS08615 7809e3ad11ac8d13c0fa612666c1e2a4 286 Gene3D G3DSA:3.40.50.300 1 153 3.0E-10 T 29-03-2018 CHH28_RS17090 2ea3c119dc6fc537752c7d5fe129f481 210 Gene3D G3DSA:3.40.50.1820 10 210 6.4E-24 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS17090 2ea3c119dc6fc537752c7d5fe129f481 210 Pfam PF12697 Alpha/beta hydrolase family 16 126 2.9E-7 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS17090 2ea3c119dc6fc537752c7d5fe129f481 210 SUPERFAMILY SSF53474 9 207 7.83E-26 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS13410 e99aa28a27f05d45ab994cc1a020949e 156 Pfam PF14316 Domain of unknown function (DUF4381) 12 147 3.2E-28 T 29-03-2018 IPR025489 Protein of unknown function (DUF4381 CHH28_RS13410 e99aa28a27f05d45ab994cc1a020949e 156 Gene3D G3DSA:1.20.5.100 32 57 8.9E-5 T 29-03-2018 CHH28_RS13710 b63ea29f9a214b59d1d750e2796e840b 235 SUPERFAMILY SSF52540 24 196 8.55E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS13710 b63ea29f9a214b59d1d750e2796e840b 235 Gene3D G3DSA:3.40.50.300 20 229 1.1E-19 T 29-03-2018 CHH28_RS01945 471eea8cbbeede71f3e7426a32f7ff58 343 Pfam PF00534 Glycosyl transferases group 1 172 321 3.4E-27 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CHH28_RS01945 471eea8cbbeede71f3e7426a32f7ff58 343 Gene3D G3DSA:3.40.50.2000 155 326 6.8E-33 T 29-03-2018 CHH28_RS01945 471eea8cbbeede71f3e7426a32f7ff58 343 SUPERFAMILY SSF53756 3 340 1.84E-41 T 29-03-2018 CHH28_RS06720 99cbb649a351031e18d685ce33ba0e90 217 Gene3D G3DSA:3.30.1380.10 3 217 5.7E-41 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CHH28_RS06720 99cbb649a351031e18d685ce33ba0e90 217 SUPERFAMILY SSF55166 10 215 9.42E-25 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CHH28_RS06720 99cbb649a351031e18d685ce33ba0e90 217 Pfam PF03411 Penicillin-insensitive murein endopeptidase 16 213 2.1E-9 T 29-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 CHH28_RS06895 aa3dc70753b520db089d106546e514e2 714 SUPERFAMILY SSF56935 37 712 1.7E-63 T 29-03-2018 CHH28_RS06895 aa3dc70753b520db089d106546e514e2 714 Gene3D G3DSA:2.170.130.10 27 162 5.1E-17 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS06895 aa3dc70753b520db089d106546e514e2 714 Pfam PF00593 TonB dependent receptor 193 712 9.0E-21 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS06895 aa3dc70753b520db089d106546e514e2 714 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 157 6.3E-12 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS06895 aa3dc70753b520db089d106546e514e2 714 Gene3D G3DSA:2.40.170.20 164 713 1.9E-44 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS14710 8b641ff276ce9eb9d518903a4f65d265 171 Pfam PF14091 Domain of unknown function (DUF4269) 12 156 2.6E-48 T 29-03-2018 IPR025365 Protein of unknown function DUF4269 CHH28_RS15775 a732a2a4342ed479495c34c4104b92ab 728 Gene3D G3DSA:3.30.1330.60 249 711 1.1E-8 T 29-03-2018 IPR006665 OmpA-like domain CHH28_RS15775 a732a2a4342ed479495c34c4104b92ab 728 Pfam PF05359 Domain of Unknown Function (DUF748) 408 537 5.9E-11 T 29-03-2018 IPR008023 Protein of unknown function DUF748 CHH28_RS01220 e8863043ff388c57502360daa7819126 334 SUPERFAMILY SSF143422 16 81 3.14E-19 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CHH28_RS01220 e8863043ff388c57502360daa7819126 334 SUPERFAMILY SSF143422 134 193 3.14E-19 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CHH28_RS01220 e8863043ff388c57502360daa7819126 334 Gene3D G3DSA:3.30.70.1290 4 195 6.6E-28 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CHH28_RS01220 e8863043ff388c57502360daa7819126 334 SMART SM01321 13 187 7.8E-4 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CHH28_RS13395 286bc7752a79e14c6f6bd4614409cbe1 552 Pfam PF13584 Oxygen tolerance 17 462 3.6E-102 T 29-03-2018 IPR025738 Aerotolerance-related protein BatD CHH28_RS18940 fdcec0e373bba2cbdf64a15e16d2d1af 261 SUPERFAMILY SSF117143 92 222 1.83E-37 T 29-03-2018 CHH28_RS18940 fdcec0e373bba2cbdf64a15e16d2d1af 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 243 5.6E-33 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CHH28_RS18940 fdcec0e373bba2cbdf64a15e16d2d1af 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 138 2.2E-45 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CHH28_RS18940 fdcec0e373bba2cbdf64a15e16d2d1af 261 Pfam PF00460 Flagella basal body rod protein 5 35 5.8E-10 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CHH28_RS18940 fdcec0e373bba2cbdf64a15e16d2d1af 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 8.4E-113 T 29-03-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 CHH28_RS18940 fdcec0e373bba2cbdf64a15e16d2d1af 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CHH28_RS18940 fdcec0e373bba2cbdf64a15e16d2d1af 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 259 3.4E-25 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CHH28_RS02220 eca8e1e06fcdf4bc0c8a76cf3e1747a7 208 Pfam PF03591 AzlC protein 1 137 3.3E-38 T 29-03-2018 IPR011606 Branched-chain amino acid transport, permease CHH28_RS11840 995b8658a718e24c3c5cf95a5d8e6ccc 122 SUPERFAMILY SSF52172 3 120 4.84E-35 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS11840 995b8658a718e24c3c5cf95a5d8e6ccc 122 Pfam PF00072 Response regulator receiver domain 5 116 6.0E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS11840 995b8658a718e24c3c5cf95a5d8e6ccc 122 Gene3D G3DSA:3.40.50.2300 1 121 1.6E-34 T 29-03-2018 CHH28_RS11840 995b8658a718e24c3c5cf95a5d8e6ccc 122 SMART SM00448 3 116 1.7E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS19400 fb6d26fba64686af09f1107acac4716a 456 Gene3D G3DSA:3.40.50.300 1 298 3.7E-26 T 29-03-2018 CHH28_RS19400 fb6d26fba64686af09f1107acac4716a 456 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 33 266 1.5E-25 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CHH28_RS19400 fb6d26fba64686af09f1107acac4716a 456 SUPERFAMILY SSF52540 1 293 1.19E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS01170 647d26068c55c5d24c9b63c724a56a0e 453 SUPERFAMILY SSF102405 118 327 4.73E-39 T 29-03-2018 CHH28_RS01170 647d26068c55c5d24c9b63c724a56a0e 453 Pfam PF14793 Domain of unknown function (DUF4478) 8 112 1.2E-39 T 29-03-2018 IPR027820 Domain of unknown function DUF4478 CHH28_RS01170 647d26068c55c5d24c9b63c724a56a0e 453 Gene3D G3DSA:3.40.50.450 123 450 2.3E-91 T 29-03-2018 CHH28_RS01170 647d26068c55c5d24c9b63c724a56a0e 453 Pfam PF11892 Domain of unknown function (DUF3412) 334 450 4.0E-52 T 29-03-2018 IPR021826 Domain of unknown function DUF3412 CHH28_RS01170 647d26068c55c5d24c9b63c724a56a0e 453 Gene3D G3DSA:3.30.1850.10 6 113 1.2E-39 T 29-03-2018 IPR027820 Domain of unknown function DUF4478 CHH28_RS01170 647d26068c55c5d24c9b63c724a56a0e 453 Pfam PF03641 Possible lysine decarboxylase 189 325 2.0E-29 T 29-03-2018 IPR031100 LOG family CHH28_RS17295 6b67426e71385761f2763e5562d33d5c 237 SUPERFAMILY SSF52218 6 223 3.98E-64 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS17295 6b67426e71385761f2763e5562d33d5c 237 Gene3D G3DSA:3.40.50.360 18 222 6.5E-45 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS17295 6b67426e71385761f2763e5562d33d5c 237 Pfam PF03358 NADPH-dependent FMN reductase 31 174 2.1E-27 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CHH28_RS17295 6b67426e71385761f2763e5562d33d5c 237 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 6 223 5.7E-122 T 29-03-2018 IPR014063 Arsenate resistance ArsH CHH28_RS07635 46cef666cf82263c9601538b5dd275f6 158 SUPERFAMILY SSF52833 34 126 8.04E-13 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS07635 46cef666cf82263c9601538b5dd275f6 158 Gene3D G3DSA:3.40.30.10 15 56 0.002 T 29-03-2018 CHH28_RS07635 46cef666cf82263c9601538b5dd275f6 158 Pfam PF13899 Thioredoxin-like 33 115 1.6E-15 T 29-03-2018 CHH28_RS07635 46cef666cf82263c9601538b5dd275f6 158 Gene3D G3DSA:3.40.30.10 57 139 4.2E-9 T 29-03-2018 CHH28_RS10420 c4aa5aaad3ed2b908986b1610c494971 143 SUPERFAMILY SSF111038 1 138 4.84E-50 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CHH28_RS10420 c4aa5aaad3ed2b908986b1610c494971 143 Pfam PF01894 Uncharacterised protein family UPF0047 19 134 4.2E-39 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CHH28_RS10420 c4aa5aaad3ed2b908986b1610c494971 143 Gene3D G3DSA:2.60.120.460 1 139 6.7E-61 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CHH28_RS10420 c4aa5aaad3ed2b908986b1610c494971 143 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CHH28_RS10420 c4aa5aaad3ed2b908986b1610c494971 143 PIRSF PIRSF004681 1 139 3.7E-46 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CHH28_RS10420 c4aa5aaad3ed2b908986b1610c494971 143 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 7 139 6.3E-46 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CHH28_RS13345 d96413f2b9f0e9af40c85c7611e934bf 613 Pfam PF03235 Protein of unknown function DUF262 17 231 1.9E-32 T 29-03-2018 IPR004919 Domain of unknown function DUF262 CHH28_RS13345 d96413f2b9f0e9af40c85c7611e934bf 613 Pfam PF07510 Protein of unknown function (DUF1524) 451 601 2.0E-12 T 29-03-2018 IPR011089 Domain of unknown function DUF1524 CHH28_RS03510 0365b95e76b74173c85b94a6c7e4b24a 157 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 148 5.8E-53 T 29-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 CHH28_RS03510 0365b95e76b74173c85b94a6c7e4b24a 157 PIRSF PIRSF016548 1 157 7.1E-52 T 29-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 CHH28_RS03455 df61966b7df3f38e32bd773c2f217acf 187 SUPERFAMILY SSF55811 5 177 2.03E-32 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CHH28_RS03455 df61966b7df3f38e32bd773c2f217acf 187 ProSitePatterns PS00893 Nudix box signature. 78 99 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CHH28_RS03455 df61966b7df3f38e32bd773c2f217acf 187 Pfam PF00293 NUDIX domain 46 156 2.1E-10 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CHH28_RS03455 df61966b7df3f38e32bd773c2f217acf 187 Gene3D G3DSA:3.90.79.10 5 183 8.4E-29 T 29-03-2018 CHH28_RS04665 8cb5a4255f857bcb23fe1637f5697317 191 Gene3D G3DSA:3.40.190.10 1 171 1.2E-5 T 29-03-2018 CHH28_RS00925 f97967cb404f2b6ace3110b9a7479f7a 225 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 8 212 1.7E-6 T 29-03-2018 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 CHH28_RS02735 d08b9c619ef1dffd3e69e501ef0f37a0 372 SUPERFAMILY SSF56935 75 318 3.48E-5 T 29-03-2018 CHH28_RS02735 d08b9c619ef1dffd3e69e501ef0f37a0 372 Gene3D G3DSA:2.40.160.10 18 352 1.2E-17 T 29-03-2018 CHH28_RS06980 495207643b76457424c3583b3dd3aaba 207 PIRSF PIRSF006324 1 206 2.2E-44 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS06980 495207643b76457424c3583b3dd3aaba 207 Pfam PF01810 LysE type translocator 15 203 6.3E-26 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS10730 02fbafe7abeae9d8d26968c54361a42f 116 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 97 2.4E-11 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS10730 02fbafe7abeae9d8d26968c54361a42f 116 SUPERFAMILY SSF56784 1 114 5.42E-22 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS10730 02fbafe7abeae9d8d26968c54361a42f 116 Gene3D G3DSA:1.10.150.240 17 81 3.6E-16 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CHH28_RS01195 7ab9007712968decb01ae474b44d274d 400 Gene3D G3DSA:1.20.1250.20 11 194 2.6E-17 T 29-03-2018 CHH28_RS01195 7ab9007712968decb01ae474b44d274d 400 Gene3D G3DSA:1.20.1250.20 195 390 7.3E-20 T 29-03-2018 CHH28_RS01195 7ab9007712968decb01ae474b44d274d 400 SUPERFAMILY SSF103473 7 383 5.62E-47 T 29-03-2018 IPR020846 Major facilitator superfamily domain CHH28_RS01195 7ab9007712968decb01ae474b44d274d 400 Pfam PF07690 Major Facilitator Superfamily 26 241 1.9E-20 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CHH28_RS13170 af519ce58016e656c3c6bedcb06c8e2d 238 Pfam PF02104 SURF1 family 29 215 4.1E-17 T 29-03-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS15440 e0d903732d764e1b4c8e3bea638a2a78 323 Gene3D G3DSA:3.40.50.300 35 293 4.7E-5 T 29-03-2018 CHH28_RS15440 e0d903732d764e1b4c8e3bea638a2a78 323 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 20 314 2.3E-91 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 CHH28_RS15440 e0d903732d764e1b4c8e3bea638a2a78 323 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 7 320 34.88 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 CHH28_RS15440 e0d903732d764e1b4c8e3bea638a2a78 323 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 49 308 3.2E-65 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 CHH28_RS15440 e0d903732d764e1b4c8e3bea638a2a78 323 SUPERFAMILY SSF52540 53 158 1.36E-10 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS11090 c43bb9b58a2d47ae41df6c6b25b12931 306 SUPERFAMILY SSF103025 31 231 2.04E-50 T 29-03-2018 CHH28_RS11090 c43bb9b58a2d47ae41df6c6b25b12931 306 Gene3D G3DSA:3.30.70.1400 36 117 1.5E-20 T 29-03-2018 CHH28_RS11090 c43bb9b58a2d47ae41df6c6b25b12931 306 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 176 240 6.0E-23 T 29-03-2018 IPR017703 YgfZ/GcvT conserved site CHH28_RS11090 c43bb9b58a2d47ae41df6c6b25b12931 306 Pfam PF01571 Aminomethyltransferase folate-binding domain 33 126 4.5E-10 T 29-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal CHH28_RS11090 c43bb9b58a2d47ae41df6c6b25b12931 306 Gene3D G3DSA:2.40.10.10 118 230 4.6E-4 T 29-03-2018 CHH28_RS11090 c43bb9b58a2d47ae41df6c6b25b12931 306 PIRSF PIRSF006487 200 269 130.0 T 29-03-2018 CHH28_RS11090 c43bb9b58a2d47ae41df6c6b25b12931 306 PIRSF PIRSF006487 29 127 4.6E-7 T 29-03-2018 CHH28_RS11540 b5bb76b585fe0e76edcf090746ed3431 335 Pfam PF05982 Na+-dependent bicarbonate transporter superfamily 18 329 1.5E-99 T 29-03-2018 IPR010293 Na+-dependent bicarbonate transporter superfamily CHH28_RS17095 0e1cc4f8899573a9f25ccb0ddea9825a 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 204 259 - T 29-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS17095 0e1cc4f8899573a9f25ccb0ddea9825a 477 SUPERFAMILY SSF81442 10 470 3.14E-123 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS17095 0e1cc4f8899573a9f25ccb0ddea9825a 477 Gene3D G3DSA:1.20.210.10 7 476 6.5E-96 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS17095 0e1cc4f8899573a9f25ccb0ddea9825a 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 445 1.6E-114 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CHH28_RS17095 0e1cc4f8899573a9f25ccb0ddea9825a 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 469 3.1E-225 T 29-03-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 CHH28_RS08155 9b0926544899b474f0156a4ed438502d 425 Pfam PF14321 Domain of unknown function (DUF4382) 53 198 4.5E-28 T 29-03-2018 IPR025491 Domain of unknown function DUF4382 CHH28_RS10810 60a6816abe251fa14eea5ed4d4b0157a 189 Gene3D G3DSA:1.20.1170.10 36 146 5.7E-5 T 29-03-2018 CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 Gene3D G3DSA:2.40.37.10 269 396 1.9E-34 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 278 366 1.9E-14 T 29-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 PRINTS PR01182 Ornithine decarboxylase signature 302 315 4.5E-20 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 PRINTS PR01182 Ornithine decarboxylase signature 105 129 4.5E-20 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 PRINTS PR01182 Ornithine decarboxylase signature 61 88 4.5E-20 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 PRINTS PR01182 Ornithine decarboxylase signature 353 366 4.5E-20 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 PRINTS PR01182 Ornithine decarboxylase signature 135 157 4.5E-20 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 PRINTS PR01182 Ornithine decarboxylase signature 333 343 4.5E-20 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 PRINTS PR01182 Ornithine decarboxylase signature 35 59 4.5E-20 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 Gene3D G3DSA:3.20.20.10 42 268 1.3E-50 T 29-03-2018 IPR029066 PLP-binding barrel CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 SUPERFAMILY SSF50621 261 387 2.93E-32 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 SUPERFAMILY SSF51419 41 279 2.62E-60 T 29-03-2018 IPR029066 PLP-binding barrel CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 9.5E-21 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 9.5E-21 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 267 286 9.5E-21 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 366 379 9.5E-21 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 185 198 9.5E-21 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 222 237 - T 29-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CHH28_RS06995 4c9871f0299643bcf0330fb13b5f4e9b 399 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 44 277 2.1E-54 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CHH28_RS15940 f89642e05913c9c1f67932b33b091049 128 Pfam PF11333 Protein of unknown function (DUF3135) 16 96 1.5E-30 T 29-03-2018 IPR021482 Protein of unknown function DUF3135 CHH28_RS02600 970beb6037734dbc381e5b23f762231d 291 Gene3D G3DSA:1.20.1560.10 187 285 1.0E-4 T 29-03-2018 CHH28_RS02600 970beb6037734dbc381e5b23f762231d 291 Gene3D G3DSA:1.20.1560.10 7 186 7.8E-8 T 29-03-2018 CHH28_RS02600 970beb6037734dbc381e5b23f762231d 291 Pfam PF13748 ABC transporter transmembrane region 12 244 6.3E-57 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS02600 970beb6037734dbc381e5b23f762231d 291 SUPERFAMILY SSF90123 13 283 2.62E-16 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CHH28_RS18295 d8d553aa285bc59aa158cdd81b7e623e 277 Pfam PF10977 Protein of unknown function (DUF2797) 40 271 8.0E-92 T 29-03-2018 IPR021246 Protein of unknown function DUF2797 CHH28_RS17435 8f276a0a6a27ed2a5c4a6f9f9cd4141b 399 Pfam PF05707 Zonular occludens toxin (Zot) 4 219 3.2E-45 T 29-03-2018 IPR008900 Zona occludens toxin CHH28_RS17435 8f276a0a6a27ed2a5c4a6f9f9cd4141b 399 Gene3D G3DSA:3.40.50.300 1 219 2.5E-7 T 29-03-2018 CHH28_RS12115 5fce12cc3494cd7749f9b232c7928e7b 574 Gene3D G3DSA:3.40.50.980 220 382 1.5E-36 T 29-03-2018 CHH28_RS12115 5fce12cc3494cd7749f9b232c7928e7b 574 ProSitePatterns PS00455 Putative AMP-binding domain signature. 214 225 - T 29-03-2018 IPR020845 AMP-binding, conserved site CHH28_RS12115 5fce12cc3494cd7749f9b232c7928e7b 574 Gene3D G3DSA:3.40.50.980 22 219 1.5E-36 T 29-03-2018 CHH28_RS12115 5fce12cc3494cd7749f9b232c7928e7b 574 SUPERFAMILY SSF56801 23 566 1.7E-144 T 29-03-2018 CHH28_RS12115 5fce12cc3494cd7749f9b232c7928e7b 574 Pfam PF13193 AMP-binding enzyme C-terminal domain 481 555 4.6E-19 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CHH28_RS12115 5fce12cc3494cd7749f9b232c7928e7b 574 Pfam PF00501 AMP-binding enzyme 32 472 1.4E-101 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CHH28_RS12115 5fce12cc3494cd7749f9b232c7928e7b 574 Gene3D G3DSA:3.30.300.30 466 564 2.9E-28 T 29-03-2018 CHH28_RS12115 5fce12cc3494cd7749f9b232c7928e7b 574 Gene3D G3DSA:2.30.38.10 383 465 1.3E-28 T 29-03-2018 CHH28_RS02985 15eac61ca59b22b5506deab93793305c 52 Pfam PF00471 Ribosomal protein L33 5 50 1.1E-17 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS02985 15eac61ca59b22b5506deab93793305c 52 ProSitePatterns PS00582 Ribosomal protein L33 signature. 18 37 - T 29-03-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS02985 15eac61ca59b22b5506deab93793305c 52 SUPERFAMILY SSF57829 3 50 2.38E-18 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CHH28_RS02985 15eac61ca59b22b5506deab93793305c 52 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 4 52 3.9E-25 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS02985 15eac61ca59b22b5506deab93793305c 52 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 50 14.862 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CHH28_RS02415 73bf327b5a778fd9fc06435dc1a4c084 152 Pfam PF13527 Acetyltransferase (GNAT) domain 4 128 4.6E-10 T 29-03-2018 CHH28_RS02415 73bf327b5a778fd9fc06435dc1a4c084 152 SUPERFAMILY SSF55729 3 142 1.22E-20 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS02415 73bf327b5a778fd9fc06435dc1a4c084 152 Gene3D G3DSA:3.40.630.30 1 143 7.0E-15 T 29-03-2018 CHH28_RS05225 969a2b967f68995bf030738785a25201 331 PIRSF PIRSF003097 30 326 4.4E-67 T 29-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 CHH28_RS14320 596079a425b03b717befc07782da9694 124 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 121 18.631 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CHH28_RS14320 596079a425b03b717befc07782da9694 124 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 4 116 5.4E-25 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CHH28_RS14320 596079a425b03b717befc07782da9694 124 TIGRFAM TIGR00494 crcB: protein CrcB 4 120 1.2E-29 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CHH28_RS03285 55a4f76144e63d99847b37d32c2d4254 395 Pfam PF09375 Imelysin 57 382 4.6E-35 T 29-03-2018 IPR018976 Peptidase M75, Imelysin CHH28_RS06760 fdebb54bf4dd4a152e447a57264a7151 193 Pfam PF03458 UPF0126 domain 84 155 3.5E-19 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 CHH28_RS06760 fdebb54bf4dd4a152e447a57264a7151 193 Pfam PF03458 UPF0126 domain 5 71 8.8E-15 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 CHH28_RS05505 910be9708ef9900dfe4952d78660ff86 121 SMART SM00448 2 115 7.3E-39 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS05505 910be9708ef9900dfe4952d78660ff86 121 SUPERFAMILY SSF52172 1 119 1.39E-38 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS05505 910be9708ef9900dfe4952d78660ff86 121 Gene3D G3DSA:3.40.50.2300 1 121 4.4E-39 T 29-03-2018 CHH28_RS05505 910be9708ef9900dfe4952d78660ff86 121 Pfam PF00072 Response regulator receiver domain 4 115 4.0E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS06080 8f67ced4703fca39f7397ec482d97904 101 Gene3D G3DSA:4.10.830.10 1 101 5.8E-33 T 29-03-2018 CHH28_RS06080 8f67ced4703fca39f7397ec482d97904 101 SUPERFAMILY SSF57716 3 101 6.99E-36 T 29-03-2018 CHH28_RS06080 8f67ced4703fca39f7397ec482d97904 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 6.7E-24 T 29-03-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CHH28_RS06080 8f67ced4703fca39f7397ec482d97904 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 62 85 - T 29-03-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CHH28_RS06080 8f67ced4703fca39f7397ec482d97904 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.304 T 29-03-2018 IPR023036 Ribosomal protein S14, bacterial/plastid CHH28_RS06730 5750c06ee40f72dab61c2d115b9cd58a 199 Gene3D G3DSA:2.60.120.10 8 150 3.1E-15 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS06730 5750c06ee40f72dab61c2d115b9cd58a 199 SUPERFAMILY SSF51206 24 142 4.71E-18 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CHH28_RS06730 5750c06ee40f72dab61c2d115b9cd58a 199 Pfam PF00027 Cyclic nucleotide-binding domain 37 121 7.4E-11 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS06730 5750c06ee40f72dab61c2d115b9cd58a 199 SMART SM00100 18 137 2.4E-4 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS06770 d3a67dc16cabd797f7f744dd0d8e0e15 561 SUPERFAMILY SSF56300 148 490 1.36E-34 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS06770 d3a67dc16cabd797f7f744dd0d8e0e15 561 Pfam PF09423 PhoD-like phosphatase 152 485 3.6E-115 T 29-03-2018 IPR018946 Alkaline phosphatase D-related CHH28_RS06770 d3a67dc16cabd797f7f744dd0d8e0e15 561 Gene3D G3DSA:3.60.21.10 146 502 1.6E-49 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS06770 d3a67dc16cabd797f7f744dd0d8e0e15 561 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 52 141 1.1E-27 T 29-03-2018 IPR032093 Phospholipase D, N-terminal CHH28_RS06770 d3a67dc16cabd797f7f744dd0d8e0e15 561 Gene3D G3DSA:2.60.40.380 51 145 1.1E-5 T 29-03-2018 CHH28_RS05515 9b7c04109ce98b7757a925a0d8b7c247 685 Gene3D G3DSA:1.10.287.950 443 674 1.3E-52 T 29-03-2018 CHH28_RS05515 9b7c04109ce98b7757a925a0d8b7c247 685 Gene3D G3DSA:1.10.287.950 328 442 5.7E-6 T 29-03-2018 CHH28_RS05515 9b7c04109ce98b7757a925a0d8b7c247 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 430 459 8.9E-20 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS05515 9b7c04109ce98b7757a925a0d8b7c247 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 536 565 8.9E-20 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS05515 9b7c04109ce98b7757a925a0d8b7c247 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 507 534 8.9E-20 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CHH28_RS05515 9b7c04109ce98b7757a925a0d8b7c247 685 SMART SM00283 409 670 2.5E-94 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS05515 9b7c04109ce98b7757a925a0d8b7c247 685 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 455 638 7.7E-42 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CHH28_RS05515 9b7c04109ce98b7757a925a0d8b7c247 685 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 40 144 1.9E-15 T 29-03-2018 IPR029095 NarX-like, N-terminal CHH28_RS05515 9b7c04109ce98b7757a925a0d8b7c247 685 SUPERFAMILY SSF58104 371 677 4.32E-67 T 29-03-2018 CHH28_RS08620 f88e0cbddf2c3a6dc49893f51741f354 151 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 4 145 1.6E-45 T 29-03-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 CHH28_RS08620 f88e0cbddf2c3a6dc49893f51741f354 151 SUPERFAMILY SSF55804 2 145 4.45E-38 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CHH28_RS08620 f88e0cbddf2c3a6dc49893f51741f354 151 Gene3D G3DSA:3.40.930.10 2 150 5.4E-38 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CHH28_RS08620 f88e0cbddf2c3a6dc49893f51741f354 151 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 145 1.7E-34 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CHH28_RS01960 201dc7a806b4270a905994b20f67e9fc 259 Pfam PF01061 ABC-2 type transporter 8 218 1.9E-17 T 29-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CHH28_RS16365 5915ce23b3dce16cb204d5f33136a166 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 1.2E-25 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS18240 5915ce23b3dce16cb204d5f33136a166 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 1.2E-25 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS13505 5915ce23b3dce16cb204d5f33136a166 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 1.2E-25 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS05255 eeef76270d2705ad445ca3e945411098 58 Pfam PF11216 Protein of unknown function (DUF3012) 23 54 5.2E-18 T 29-03-2018 IPR021379 Protein of unknown function DUF3012 CHH28_RS12655 ed75355a1139845db93d97fd6acb9f67 255 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 9 251 8.4E-54 T 29-03-2018 IPR026387 Outer membrane protein CHH28_RS12655 ed75355a1139845db93d97fd6acb9f67 255 Gene3D G3DSA:2.40.160.20 8 255 5.7E-7 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS06190 fc1ed37011255cb60c950298f710eec8 189 Pfam PF11845 Protein of unknown function (DUF3365) 10 184 2.6E-28 T 29-03-2018 IPR021796 Protein of unknown function DUF3365 CHH28_RS13685 1cc4a053f023e1f65e9916fd8b087fd1 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 235 4.7E-54 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CHH28_RS13685 1cc4a053f023e1f65e9916fd8b087fd1 310 SUPERFAMILY SSF51735 2 300 1.15E-86 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS13685 1cc4a053f023e1f65e9916fd8b087fd1 310 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 139 0.0019 T 29-03-2018 CHH28_RS13685 1cc4a053f023e1f65e9916fd8b087fd1 310 Gene3D G3DSA:3.90.25.10 168 302 9.7E-38 T 29-03-2018 CHH28_RS13685 1cc4a053f023e1f65e9916fd8b087fd1 310 Gene3D G3DSA:3.40.50.720 3 167 5.0E-38 T 29-03-2018 CHH28_RS19705 45d815332afca4607cd7359222cd43d3 113 Gene3D G3DSA:3.10.50.40 2 91 4.7E-13 T 29-03-2018 CHH28_RS19705 45d815332afca4607cd7359222cd43d3 113 Pfam PF00639 PPIC-type PPIASE domain 16 88 2.2E-8 T 29-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CHH28_RS19705 45d815332afca4607cd7359222cd43d3 113 SUPERFAMILY SSF54534 6 90 3.73E-14 T 29-03-2018 CHH28_RS14890 6203355bd7a1d3b24ace3ee4f97dee76 333 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 321 1.6E-78 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CHH28_RS14890 6203355bd7a1d3b24ace3ee4f97dee76 333 Gene3D G3DSA:3.40.718.10 1 332 2.9E-78 T 29-03-2018 CHH28_RS14890 6203355bd7a1d3b24ace3ee4f97dee76 333 Pfam PF02504 Fatty acid synthesis protein 3 310 8.5E-80 T 29-03-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 CHH28_RS14890 6203355bd7a1d3b24ace3ee4f97dee76 333 PIRSF PIRSF002465 1 333 3.7E-98 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CHH28_RS14890 6203355bd7a1d3b24ace3ee4f97dee76 333 SUPERFAMILY SSF53659 3 320 5.76E-76 T 29-03-2018 CHH28_RS14890 6203355bd7a1d3b24ace3ee4f97dee76 333 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 333 104.247 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CHH28_RS02900 e3a484c3e1c2005729f05724e1d648f0 83 SUPERFAMILY SSF47336 3 78 8.38E-11 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CHH28_RS02900 e3a484c3e1c2005729f05724e1d648f0 83 Pfam PF00550 Phosphopantetheine attachment site 10 72 9.2E-10 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CHH28_RS02900 e3a484c3e1c2005729f05724e1d648f0 83 Gene3D G3DSA:1.10.1200.10 1 82 1.7E-9 T 29-03-2018 CHH28_RS03550 c4749db4084c8c2658f487fda2370424 157 PIRSF PIRSF005900 1 157 1.4E-46 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CHH28_RS03550 c4749db4084c8c2658f487fda2370424 157 ProSitePatterns PS00819 Dps protein family signature 2. 64 78 - T 29-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CHH28_RS03550 c4749db4084c8c2658f487fda2370424 157 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 29-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CHH28_RS03550 c4749db4084c8c2658f487fda2370424 157 Gene3D G3DSA:1.20.1260.10 3 157 9.7E-42 T 29-03-2018 IPR012347 Ferritin-related CHH28_RS03550 c4749db4084c8c2658f487fda2370424 157 Pfam PF00210 Ferritin-like domain 18 156 1.1E-25 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CHH28_RS03550 c4749db4084c8c2658f487fda2370424 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 3.4E-13 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CHH28_RS03550 c4749db4084c8c2658f487fda2370424 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 3.4E-13 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CHH28_RS03550 c4749db4084c8c2658f487fda2370424 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 3.4E-13 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CHH28_RS03550 c4749db4084c8c2658f487fda2370424 157 SUPERFAMILY SSF47240 2 156 3.81E-43 T 29-03-2018 IPR009078 Ferritin-like superfamily CHH28_RS08135 6599bb8c723795fda60c344633bedc2e 106 Gene3D G3DSA:3.40.30.10 1 106 2.7E-28 T 29-03-2018 CHH28_RS08135 6599bb8c723795fda60c344633bedc2e 106 SUPERFAMILY SSF52833 1 102 1.4E-33 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS08135 6599bb8c723795fda60c344633bedc2e 106 PIRSF PIRSF005894 1 106 1.1E-49 T 29-03-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 CHH28_RS08135 6599bb8c723795fda60c344633bedc2e 106 Pfam PF00462 Glutaredoxin 16 80 6.9E-17 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CHH28_RS08135 6599bb8c723795fda60c344633bedc2e 106 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 9.6E-46 T 29-03-2018 IPR004480 Monothiol glutaredoxin-related CHH28_RS16630 f413ab942db95d2af1079a64a54d2103 268 Gene3D G3DSA:2.60.40.10 27 128 4.4E-6 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS02925 1e49957daa6294b5dbdd779a7cbdeca3 258 Pfam PF17131 Outer membrane lipoprotein-sorting protein 82 254 1.0E-36 T 29-03-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein CHH28_RS02925 1e49957daa6294b5dbdd779a7cbdeca3 258 Gene3D G3DSA:2.50.20.10 28 257 2.7E-35 T 29-03-2018 CHH28_RS02925 1e49957daa6294b5dbdd779a7cbdeca3 258 SUPERFAMILY SSF89392 88 182 2.75E-8 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CHH28_RS02925 1e49957daa6294b5dbdd779a7cbdeca3 258 SUPERFAMILY SSF89392 215 248 2.75E-8 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CHH28_RS02925 1e49957daa6294b5dbdd779a7cbdeca3 258 PIRSF PIRSF028205 7 257 2.3E-56 T 29-03-2018 IPR011220 Uncharacterised conserved protein UCP028205 CHH28_RS16655 7344dc8fdb8e1245d418b7b3677fb327 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.5E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS16655 7344dc8fdb8e1245d418b7b3677fb327 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.5E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS16655 7344dc8fdb8e1245d418b7b3677fb327 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.5E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS16655 7344dc8fdb8e1245d418b7b3677fb327 311 Gene3D G3DSA:1.10.10.10 4 86 1.2E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS16655 7344dc8fdb8e1245d418b7b3677fb327 311 SUPERFAMILY SSF46785 6 111 1.33E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS16655 7344dc8fdb8e1245d418b7b3677fb327 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 8.8E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CHH28_RS16655 7344dc8fdb8e1245d418b7b3677fb327 311 SUPERFAMILY SSF53850 90 306 4.34E-24 T 29-03-2018 CHH28_RS16655 7344dc8fdb8e1245d418b7b3677fb327 311 Gene3D G3DSA:3.40.190.10 92 173 5.9E-10 T 29-03-2018 CHH28_RS16655 7344dc8fdb8e1245d418b7b3677fb327 311 Gene3D G3DSA:3.40.190.10 174 276 1.3E-11 T 29-03-2018 CHH28_RS16655 7344dc8fdb8e1245d418b7b3677fb327 311 Pfam PF03466 LysR substrate binding domain 88 304 2.0E-22 T 29-03-2018 IPR005119 LysR, substrate-binding CHH28_RS12705 37a876a798937ef23d49b9cde7c365d2 202 Pfam PF01081 KDPG and KHG aldolase 8 197 6.1E-68 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CHH28_RS12705 37a876a798937ef23d49b9cde7c365d2 202 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 35 44 - T 29-03-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CHH28_RS12705 37a876a798937ef23d49b9cde7c365d2 202 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 8 199 3.8E-75 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CHH28_RS12705 37a876a798937ef23d49b9cde7c365d2 202 Gene3D G3DSA:3.20.20.70 6 195 4.0E-30 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS12705 37a876a798937ef23d49b9cde7c365d2 202 SUPERFAMILY SSF51569 8 199 3.11E-65 T 29-03-2018 CHH28_RS04035 6b2e44f811f9ea57294716cea04b05c9 422 SUPERFAMILY SSF118215 11 415 3.27E-108 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04035 6b2e44f811f9ea57294716cea04b05c9 422 Gene3D G3DSA:1.10.3860.10 7 421 1.9E-121 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04035 6b2e44f811f9ea57294716cea04b05c9 422 PRINTS PR00173 Glutamate-aspartate symporter signature 308 334 1.4E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04035 6b2e44f811f9ea57294716cea04b05c9 422 PRINTS PR00173 Glutamate-aspartate symporter signature 343 362 1.4E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04035 6b2e44f811f9ea57294716cea04b05c9 422 PRINTS PR00173 Glutamate-aspartate symporter signature 370 390 1.4E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04035 6b2e44f811f9ea57294716cea04b05c9 422 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 1.4E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04035 6b2e44f811f9ea57294716cea04b05c9 422 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 1.4E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04035 6b2e44f811f9ea57294716cea04b05c9 422 PRINTS PR00173 Glutamate-aspartate symporter signature 9 29 1.4E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04035 6b2e44f811f9ea57294716cea04b05c9 422 PRINTS PR00173 Glutamate-aspartate symporter signature 206 225 1.4E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04035 6b2e44f811f9ea57294716cea04b05c9 422 PRINTS PR00173 Glutamate-aspartate symporter signature 241 260 1.4E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS04035 6b2e44f811f9ea57294716cea04b05c9 422 Pfam PF00375 Sodium:dicarboxylate symporter family 11 415 1.7E-119 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CHH28_RS01090 57d761f871b1b311367b2fd4d79ff390 353 Gene3D G3DSA:3.40.50.2300 20 137 1.6E-31 T 29-03-2018 CHH28_RS01090 57d761f871b1b311367b2fd4d79ff390 353 Gene3D G3DSA:3.40.50.2300 138 352 4.9E-57 T 29-03-2018 CHH28_RS01090 57d761f871b1b311367b2fd4d79ff390 353 SUPERFAMILY SSF53822 164 245 7.06E-5 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CHH28_RS01090 57d761f871b1b311367b2fd4d79ff390 353 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 23 298 2.1E-62 T 29-03-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 CHH28_RS15755 3bf93e3da49f506c6b87774134675605 337 Gene3D G3DSA:3.40.190.10 134 225 3.4E-15 T 29-03-2018 CHH28_RS15755 3bf93e3da49f506c6b87774134675605 337 SUPERFAMILY SSF53850 24 252 2.94E-45 T 29-03-2018 CHH28_RS15755 3bf93e3da49f506c6b87774134675605 337 Gene3D G3DSA:3.40.190.10 23 133 1.3E-20 T 29-03-2018 CHH28_RS15755 3bf93e3da49f506c6b87774134675605 337 SMART SM00062 33 255 1.2E-47 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS15755 3bf93e3da49f506c6b87774134675605 337 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 248 7.2E-28 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS19320 c5a377f4ab597a4eb2cdee50c27e3400 398 Gene3D G3DSA:3.40.190.10 46 386 6.1E-7 T 29-03-2018 CHH28_RS19320 c5a377f4ab597a4eb2cdee50c27e3400 398 Pfam PF09375 Imelysin 99 360 9.7E-16 T 29-03-2018 IPR018976 Peptidase M75, Imelysin CHH28_RS07655 5ef3eea5e8a617e8dce5585bedfc211d 134 Gene3D G3DSA:1.20.120.550 4 134 9.2E-14 T 29-03-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain CHH28_RS07655 5ef3eea5e8a617e8dce5585bedfc211d 134 SUPERFAMILY SSF161084 10 126 1.14E-16 T 29-03-2018 CHH28_RS07655 5ef3eea5e8a617e8dce5585bedfc211d 134 Pfam PF01124 MAPEG family 17 130 4.4E-12 T 29-03-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CHH28_RS05520 5cab23ee5c9501ce05aeb9617fcd8e98 295 SMART SM00138 17 281 2.3E-69 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS05520 5cab23ee5c9501ce05aeb9617fcd8e98 295 Gene3D G3DSA:3.40.50.150 85 279 7.2E-38 T 29-03-2018 CHH28_RS05520 5cab23ee5c9501ce05aeb9617fcd8e98 295 SUPERFAMILY SSF53335 87 273 3.7E-41 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS05520 5cab23ee5c9501ce05aeb9617fcd8e98 295 Pfam PF03705 CheR methyltransferase, all-alpha domain 20 70 5.2E-11 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CHH28_RS05520 5cab23ee5c9501ce05aeb9617fcd8e98 295 Gene3D G3DSA:1.10.155.10 12 84 1.7E-17 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CHH28_RS05520 5cab23ee5c9501ce05aeb9617fcd8e98 295 Pfam PF01739 CheR methyltransferase, SAM binding domain 86 267 6.6E-46 T 29-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CHH28_RS05520 5cab23ee5c9501ce05aeb9617fcd8e98 295 PRINTS PR00996 Glutamate methyltransferase family signature 240 263 1.7E-30 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS05520 5cab23ee5c9501ce05aeb9617fcd8e98 295 PRINTS PR00996 Glutamate methyltransferase family signature 152 168 1.7E-30 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS05520 5cab23ee5c9501ce05aeb9617fcd8e98 295 PRINTS PR00996 Glutamate methyltransferase family signature 39 52 1.7E-30 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS05520 5cab23ee5c9501ce05aeb9617fcd8e98 295 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 1.7E-30 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS05520 5cab23ee5c9501ce05aeb9617fcd8e98 295 PRINTS PR00996 Glutamate methyltransferase family signature 79 91 1.7E-30 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS05520 5cab23ee5c9501ce05aeb9617fcd8e98 295 PRINTS PR00996 Glutamate methyltransferase family signature 221 235 1.7E-30 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CHH28_RS05520 5cab23ee5c9501ce05aeb9617fcd8e98 295 SUPERFAMILY SSF47757 13 85 6.41E-14 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CHH28_RS14735 c5bba02bcd39c2b9f8bbfa45faf42b73 286 SMART SM00382 29 215 1.1E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS14735 c5bba02bcd39c2b9f8bbfa45faf42b73 286 SUPERFAMILY SSF52540 4 222 3.42E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS14735 c5bba02bcd39c2b9f8bbfa45faf42b73 286 Pfam PF00005 ABC transporter 20 157 1.6E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS14735 c5bba02bcd39c2b9f8bbfa45faf42b73 286 Gene3D G3DSA:3.40.50.300 1 250 2.0E-46 T 29-03-2018 CHH28_RS15140 54a335f0c0765d4dd52546ac5cc648fa 212 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 182 195 - T 29-03-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CHH28_RS15140 54a335f0c0765d4dd52546ac5cc648fa 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 172 212 9.8E-17 T 29-03-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CHH28_RS15140 54a335f0c0765d4dd52546ac5cc648fa 212 Gene3D G3DSA:2.30.110.10 10 212 1.1E-68 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CHH28_RS15140 54a335f0c0765d4dd52546ac5cc648fa 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 10 212 37.759 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CHH28_RS15140 54a335f0c0765d4dd52546ac5cc648fa 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 43 118 1.3E-22 T 29-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CHH28_RS15140 54a335f0c0765d4dd52546ac5cc648fa 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 2 212 4.8E-81 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CHH28_RS15140 54a335f0c0765d4dd52546ac5cc648fa 212 SUPERFAMILY SSF50475 8 212 1.72E-63 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CHH28_RS15140 54a335f0c0765d4dd52546ac5cc648fa 212 PIRSF PIRSF000190 2 212 1.2E-76 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CHH28_RS15645 ee16a96db4563e833e999e0ffcb238e0 115 PIRSF PIRSF000169 1 115 5.6E-46 T 29-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CHH28_RS15645 ee16a96db4563e833e999e0ffcb238e0 115 Gene3D G3DSA:1.20.1300.10 1 115 8.3E-21 T 29-03-2018 CHH28_RS15645 ee16a96db4563e833e999e0ffcb238e0 115 SUPERFAMILY SSF81343 5 115 4.14E-31 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS15645 ee16a96db4563e833e999e0ffcb238e0 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 2.4E-38 T 29-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CHH28_RS15645 ee16a96db4563e833e999e0ffcb238e0 115 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 105 4.7E-8 T 29-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS03535 b0e3b2a06ddb148b28ecde3ac893c672 158 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 16 113 5.3E-15 T 29-03-2018 IPR012659 Conserved hypothetical protein CHP02444 CHH28_RS03535 b0e3b2a06ddb148b28ecde3ac893c672 158 Pfam PF09523 Protein of unknown function (DUF2390) 17 112 6.7E-22 T 29-03-2018 IPR012659 Conserved hypothetical protein CHP02444 CHH28_RS06280 d84088dd6b3f0d13f71f5f35ce160706 329 Gene3D G3DSA:3.40.50.300 1 213 4.0E-30 T 29-03-2018 CHH28_RS06280 d84088dd6b3f0d13f71f5f35ce160706 329 SUPERFAMILY SSF52540 5 164 4.3E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS06280 d84088dd6b3f0d13f71f5f35ce160706 329 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 166 6.2E-40 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CHH28_RS06280 d84088dd6b3f0d13f71f5f35ce160706 329 SMART SM00833 243 325 0.009 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CHH28_RS15030 28921200c0b98734fb895643f257ff96 293 SUPERFAMILY SSF117396 19 277 7.85E-60 T 29-03-2018 IPR002763 Protein of unknown function DUF72 CHH28_RS15030 28921200c0b98734fb895643f257ff96 293 Gene3D G3DSA:3.20.20.410 6 281 4.8E-60 T 29-03-2018 IPR002763 Protein of unknown function DUF72 CHH28_RS15030 28921200c0b98734fb895643f257ff96 293 Pfam PF01904 Protein of unknown function DUF72 37 275 2.8E-50 T 29-03-2018 IPR002763 Protein of unknown function DUF72 CHH28_RS17945 f2c6e205375cad501ce93915aeab24e0 342 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 252 284 1.9E-14 T 29-03-2018 IPR001451 Hexapeptide repeat CHH28_RS17945 f2c6e205375cad501ce93915aeab24e0 342 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 130 170 4.7E-16 T 29-03-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 CHH28_RS17945 f2c6e205375cad501ce93915aeab24e0 342 Gene3D G3DSA:3.30.60.70 130 170 7.2E-16 T 29-03-2018 CHH28_RS17945 f2c6e205375cad501ce93915aeab24e0 342 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 339 43.757 T 29-03-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 CHH28_RS17945 f2c6e205375cad501ce93915aeab24e0 342 Gene3D G3DSA:2.160.10.10 171 339 1.8E-15 T 29-03-2018 CHH28_RS17945 f2c6e205375cad501ce93915aeab24e0 342 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 342 3.8E-183 T 29-03-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 CHH28_RS17945 f2c6e205375cad501ce93915aeab24e0 342 SUPERFAMILY SSF51161 89 290 3.6E-37 T 29-03-2018 IPR011004 Trimeric LpxA-like CHH28_RS03890 7afe95deee6eb60ebad6e93b462e1926 129 Pfam PF11351 Holin of 3TMs, for gene-transfer release 9 90 8.8E-8 T 29-03-2018 IPR021497 Holin of 3TMs, for gene-transfer release CHH28_RS09655 6e1d3644b9e59e7f13bf3862bbce309d 158 Pfam PF13511 Domain of unknown function (DUF4124) 37 84 5.7E-12 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 CHH28_RS12050 18b11354ac88356f9215316d77e7a4a1 417 SUPERFAMILY SSF51735 7 163 1.75E-13 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS12050 18b11354ac88356f9215316d77e7a4a1 417 Gene3D G3DSA:3.40.50.720 1 201 5.5E-21 T 29-03-2018 CHH28_RS12050 18b11354ac88356f9215316d77e7a4a1 417 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 8 141 1.7E-15 T 29-03-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 CHH28_RS08640 f123865cab7dda2bae52cb511d7a7cf5 217 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 3 165 22.756 T 29-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CHH28_RS08640 f123865cab7dda2bae52cb511d7a7cf5 217 Pfam PF03968 OstA-like protein 30 137 2.0E-23 T 29-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal CHH28_RS08640 f123865cab7dda2bae52cb511d7a7cf5 217 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 19 165 4.8E-37 T 29-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CHH28_RS08640 f123865cab7dda2bae52cb511d7a7cf5 217 Gene3D G3DSA:2.60.450.10 19 162 1.4E-22 T 29-03-2018 CHH28_RS00145 c06785d149cf730acb45959fa9bbb5fb 248 Gene3D G3DSA:3.40.50.720 1 246 1.2E-69 T 29-03-2018 CHH28_RS00145 c06785d149cf730acb45959fa9bbb5fb 248 SUPERFAMILY SSF69572 2 245 2.75E-81 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CHH28_RS00145 c06785d149cf730acb45959fa9bbb5fb 248 Pfam PF00899 ThiF family 10 243 1.9E-62 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CHH28_RS19025 57c641cc056c171ede0a65f94289fcb4 59 Gene3D G3DSA:1.20.1500.10 4 58 2.3E-4 T 29-03-2018 IPR023378 YheA/YmcA-like domain CHH28_RS09740 5519ecc6796cd3b2bb1d41637fb6a47a 136 Pfam PF04314 Copper chaperone PCu(A)C 23 120 1.1E-30 T 29-03-2018 IPR007410 Copper chaperone PCuAC CHH28_RS09740 5519ecc6796cd3b2bb1d41637fb6a47a 136 SUPERFAMILY SSF110087 6 134 7.06E-38 T 29-03-2018 IPR007410 Copper chaperone PCuAC CHH28_RS18115 6f065b2d66a2dfe8a54309b94aa2f042 233 Pfam PF04519 Polymer-forming cytoskeletal 64 161 3.5E-22 T 29-03-2018 IPR007607 Protein of unknown function DUF583 CHH28_RS06475 f1ca6a1b7b342cd49b23124b275e505e 178 Gene3D G3DSA:3.40.630.30 13 167 3.7E-17 T 29-03-2018 CHH28_RS06475 f1ca6a1b7b342cd49b23124b275e505e 178 SUPERFAMILY SSF55729 19 156 7.98E-20 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS06475 f1ca6a1b7b342cd49b23124b275e505e 178 Pfam PF13302 Acetyltransferase (GNAT) domain 41 148 4.1E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS03460 fa2c1bb5e3b745d7ebd140972e83c11d 219 Gene3D G3DSA:3.40.50.1000 2 204 2.7E-26 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS03460 fa2c1bb5e3b745d7ebd140972e83c11d 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 93 190 4.3E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CHH28_RS03460 fa2c1bb5e3b745d7ebd140972e83c11d 219 SUPERFAMILY SSF56784 5 216 2.07E-39 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS03460 fa2c1bb5e3b745d7ebd140972e83c11d 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 189 2.1E-12 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS08165 fded3c6eaf3d18e4fd0c51a333a03677 291 Pfam PF04116 Fatty acid hydroxylase superfamily 120 264 2.9E-25 T 29-03-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 CHH28_RS08885 a25eac133cb2094d794b17d46b232ecc 164 Pfam PF06042 Nucleotidyltransferase 7 162 4.2E-56 T 29-03-2018 IPR009267 Putative nucleotidyltransferase CHH28_RS08600 f68dd10728c96db11843e13ca0aac8b5 168 PIRSF PIRSF016183 2 168 6.6E-54 T 29-03-2018 IPR006839 Ribosome-associated, YjgA CHH28_RS08600 f68dd10728c96db11843e13ca0aac8b5 168 Pfam PF04751 Protein of unknown function (DUF615) 13 162 1.1E-49 T 29-03-2018 IPR006839 Ribosome-associated, YjgA CHH28_RS08600 f68dd10728c96db11843e13ca0aac8b5 168 Gene3D G3DSA:1.10.60.30 98 168 1.5E-24 T 29-03-2018 CHH28_RS08600 f68dd10728c96db11843e13ca0aac8b5 168 SUPERFAMILY SSF158710 22 165 4.71E-46 T 29-03-2018 IPR023153 PSPTO4464-like domain CHH28_RS08600 f68dd10728c96db11843e13ca0aac8b5 168 Gene3D G3DSA:1.10.60.30 24 92 1.5E-23 T 29-03-2018 CHH28_RS02300 cefec3e79b67f3faf5e340915a343345 260 SUPERFAMILY SSF53850 34 245 3.04E-20 T 29-03-2018 CHH28_RS02300 cefec3e79b67f3faf5e340915a343345 260 Gene3D G3DSA:3.40.190.10 24 248 4.4E-13 T 29-03-2018 CHH28_RS16720 ec4c1fc977cdbce9355f7444f6894c93 101 SUPERFAMILY SSF56219 1 92 3.93E-9 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS16720 ec4c1fc977cdbce9355f7444f6894c93 101 Gene3D G3DSA:3.60.10.10 1 96 6.2E-10 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CHH28_RS02310 cc7eed19cdfc238ed18975b0cd9f727d 251 Pfam PF01925 Sulfite exporter TauE/SafE 13 246 1.9E-39 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CHH28_RS07945 c87cabf023941a30d760beac8081b3b6 132 Pfam PF13586 Transposase DDE domain 44 130 1.0E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS07945 c87cabf023941a30d760beac8081b3b6 132 Gene3D G3DSA:3.90.350.10 1 117 3.1E-4 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS14150 161250bcdff9533c1678d257842a531f 245 Pfam PF07314 Protein of unknown function (DUF1461) 100 206 2.5E-8 T 29-03-2018 IPR010178 Integral membrane protein 1906 CHH28_RS14350 9c35b7938cda7cc82396175f2ef483a9 114 SUPERFAMILY SSF75169 1 114 5.3E-16 T 29-03-2018 IPR027396 DsrEFH-like CHH28_RS14350 9c35b7938cda7cc82396175f2ef483a9 114 Gene3D G3DSA:3.40.1260.10 1 114 1.3E-8 T 29-03-2018 CHH28_RS14350 9c35b7938cda7cc82396175f2ef483a9 114 Pfam PF02635 DsrE/DsrF-like family 1 114 6.3E-7 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CHH28_RS10720 cfd2c1ff725202b57541c5f8afa265f6 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 7.0E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS10850 cfd2c1ff725202b57541c5f8afa265f6 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 7.0E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS09230 2f3ab88a2e4ac3f77aebdf81f60be6b8 473 Gene3D G3DSA:2.10.10.20 414 472 1.3E-4 T 29-03-2018 CHH28_RS09230 2f3ab88a2e4ac3f77aebdf81f60be6b8 473 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 39 204 1.5E-35 T 29-03-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal CHH28_RS09230 2f3ab88a2e4ac3f77aebdf81f60be6b8 473 Gene3D G3DSA:2.70.50.50 39 207 2.5E-50 T 29-03-2018 CHH28_RS09230 2f3ab88a2e4ac3f77aebdf81f60be6b8 473 SUPERFAMILY SSF81296 39 206 1.12E-56 T 29-03-2018 IPR014756 Immunoglobulin E-set CHH28_RS03555 3924fa618b1794291aab716862ba98d9 141 Pfam PF00293 NUDIX domain 3 120 1.8E-18 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CHH28_RS03555 3924fa618b1794291aab716862ba98d9 141 Gene3D G3DSA:3.90.79.10 1 135 3.0E-22 T 29-03-2018 CHH28_RS03555 3924fa618b1794291aab716862ba98d9 141 PRINTS PR00502 NUDIX hydrolase family signature 29 43 4.3E-8 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CHH28_RS03555 3924fa618b1794291aab716862ba98d9 141 PRINTS PR00502 NUDIX hydrolase family signature 43 58 4.3E-8 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CHH28_RS03555 3924fa618b1794291aab716862ba98d9 141 SUPERFAMILY SSF55811 4 121 3.25E-25 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CHH28_RS18045 2ed16a9ecef6149a8fd7868cbfe32ed2 216 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 2.6E-93 T 29-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CHH28_RS18045 2ed16a9ecef6149a8fd7868cbfe32ed2 216 Hamap MF_00157 Ribonuclease T [rnt]. 1 216 100.932 T 29-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CHH28_RS18045 2ed16a9ecef6149a8fd7868cbfe32ed2 216 Pfam PF00929 Exonuclease 20 194 1.2E-31 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CHH28_RS18045 2ed16a9ecef6149a8fd7868cbfe32ed2 216 SUPERFAMILY SSF53098 9 207 1.76E-55 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS18045 2ed16a9ecef6149a8fd7868cbfe32ed2 216 SMART SM00479 18 203 6.9E-25 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CHH28_RS18045 2ed16a9ecef6149a8fd7868cbfe32ed2 216 Gene3D G3DSA:3.30.420.10 10 215 2.0E-31 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CHH28_RS05080 acee8ae7db00652be0cfcc0a7382b30e 383 Gene3D G3DSA:1.10.3470.10 9 355 1.1E-30 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CHH28_RS05080 acee8ae7db00652be0cfcc0a7382b30e 383 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 343 1.1E-42 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CHH28_RS05080 acee8ae7db00652be0cfcc0a7382b30e 383 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 41 355 1.2E-137 T 29-03-2018 IPR017778 ABC transporter, urea, permease protein, UrtC CHH28_RS13975 9c62fc36abf740db8528d8b8751f7f6c 250 Pfam PF08241 Methyltransferase domain 47 129 7.8E-7 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CHH28_RS13975 9c62fc36abf740db8528d8b8751f7f6c 250 Gene3D G3DSA:3.40.50.150 50 221 3.7E-11 T 29-03-2018 CHH28_RS13975 9c62fc36abf740db8528d8b8751f7f6c 250 SUPERFAMILY SSF53335 34 187 1.69E-12 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS12495 5eec23102d679b0d542251cbf47802c4 340 Pfam PF00561 alpha/beta hydrolase fold 84 318 1.5E-25 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS12495 5eec23102d679b0d542251cbf47802c4 340 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 124 3.1E-13 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS12495 5eec23102d679b0d542251cbf47802c4 340 PRINTS PR00111 Alpha/beta hydrolase fold signature 278 292 3.1E-13 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS12495 5eec23102d679b0d542251cbf47802c4 340 PRINTS PR00111 Alpha/beta hydrolase fold signature 155 168 3.1E-13 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS12495 5eec23102d679b0d542251cbf47802c4 340 PRINTS PR00111 Alpha/beta hydrolase fold signature 169 182 3.1E-13 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS12495 5eec23102d679b0d542251cbf47802c4 340 SUPERFAMILY SSF53474 60 333 4.83E-65 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS12495 5eec23102d679b0d542251cbf47802c4 340 Gene3D G3DSA:3.40.50.1820 57 335 7.2E-55 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS03545 438243ad54754e86f00a453e76bc7896 438 Pfam PF03553 Na+/H+ antiporter family 39 215 1.6E-17 T 29-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CHH28_RS03545 438243ad54754e86f00a453e76bc7896 438 Pfam PF03553 Na+/H+ antiporter family 237 432 3.4E-7 T 29-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CHH28_RS08755 3777700277766f768773c153d12a0bf6 251 Pfam PF01975 Survival protein SurE 4 181 1.9E-52 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CHH28_RS08755 3777700277766f768773c153d12a0bf6 251 Gene3D G3DSA:3.40.1210.10 1 247 4.9E-74 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CHH28_RS08755 3777700277766f768773c153d12a0bf6 251 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 249 35.937 T 29-03-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CHH28_RS08755 3777700277766f768773c153d12a0bf6 251 SUPERFAMILY SSF64167 1 245 2.09E-75 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CHH28_RS08755 3777700277766f768773c153d12a0bf6 251 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 1.5E-58 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CHH28_RS18780 05f16e2aeda15a13335a2afb6471a141 188 SUPERFAMILY SSF64438 6 159 3.39E-46 T 29-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CHH28_RS18780 05f16e2aeda15a13335a2afb6471a141 188 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 1 159 27.09 T 29-03-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 CHH28_RS18780 05f16e2aeda15a13335a2afb6471a141 188 Pfam PF03975 CheD chemotactic sensory transduction 48 155 1.7E-29 T 29-03-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 CHH28_RS03080 1dc3f95c485343fcab4625b9baabfde0 105 Pfam PF07978 NIPSNAP 6 104 1.3E-5 T 29-03-2018 IPR012577 NIPSNAP CHH28_RS03080 1dc3f95c485343fcab4625b9baabfde0 105 Gene3D G3DSA:3.30.70.100 2 105 7.7E-16 T 29-03-2018 CHH28_RS03080 1dc3f95c485343fcab4625b9baabfde0 105 SUPERFAMILY SSF54909 4 103 1.02E-13 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CHH28_RS17670 6d9ff75dd68978ffdea4a1cf85d0d8de 436 Pfam PF01979 Amidohydrolase family 58 407 1.6E-67 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CHH28_RS17670 6d9ff75dd68978ffdea4a1cf85d0d8de 436 Gene3D G3DSA:2.30.40.10 1 70 4.1E-14 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS17670 6d9ff75dd68978ffdea4a1cf85d0d8de 436 SUPERFAMILY SSF51338 359 433 7.28E-20 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS17670 6d9ff75dd68978ffdea4a1cf85d0d8de 436 SUPERFAMILY SSF51338 4 61 7.28E-20 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CHH28_RS17670 6d9ff75dd68978ffdea4a1cf85d0d8de 436 Gene3D G3DSA:3.20.20.140 71 359 8.0E-65 T 29-03-2018 CHH28_RS17670 6d9ff75dd68978ffdea4a1cf85d0d8de 436 SUPERFAMILY SSF51556 61 360 3.83E-100 T 29-03-2018 IPR032466 Metal-dependent hydrolase CHH28_RS00695 5d72c0ef89d951c998e210399e34cfed 267 SMART SM01150 5 265 4.6E-120 T 29-03-2018 IPR009770 Domain of unknown function DUF1338 CHH28_RS00695 5d72c0ef89d951c998e210399e34cfed 267 Pfam PF07063 Domain of unknown function (DUF1338) 6 264 2.7E-48 T 29-03-2018 IPR009770 Domain of unknown function DUF1338 CHH28_RS09200 393dcf7ee2cfd7effe7434ed1c97424b 117 Pfam PF05656 Protein of unknown function (DUF805) 11 112 2.2E-34 T 29-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 CHH28_RS15650 598eb8a7f1d12e0fc8ad64f4e1f1cd24 124 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 118 4.7E-28 T 29-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS15650 598eb8a7f1d12e0fc8ad64f4e1f1cd24 124 PIRSF PIRSF000178 1 124 4.9E-28 T 29-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS15650 598eb8a7f1d12e0fc8ad64f4e1f1cd24 124 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 4 122 3.6E-37 T 29-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS15650 598eb8a7f1d12e0fc8ad64f4e1f1cd24 124 SUPERFAMILY SSF81343 2 124 3.71E-31 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS15650 598eb8a7f1d12e0fc8ad64f4e1f1cd24 124 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 5 29 - T 29-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CHH28_RS15650 598eb8a7f1d12e0fc8ad64f4e1f1cd24 124 Gene3D G3DSA:1.20.1300.10 1 124 2.7E-26 T 29-03-2018 CHH28_RS14860 c271e4dd47ab5e46e6bf4e609fe8c1d6 337 Pfam PF02618 YceG-like family 31 316 9.1E-71 T 29-03-2018 IPR003770 Endolytic murein transglycosylase CHH28_RS14860 c271e4dd47ab5e46e6bf4e609fe8c1d6 337 Gene3D G3DSA:3.30.160.60 292 325 3.1E-15 T 29-03-2018 CHH28_RS14860 c271e4dd47ab5e46e6bf4e609fe8c1d6 337 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 21 319 1.7E-67 T 29-03-2018 IPR003770 Endolytic murein transglycosylase CHH28_RS14860 c271e4dd47ab5e46e6bf4e609fe8c1d6 337 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 3 323 30.532 T 29-03-2018 IPR003770 Endolytic murein transglycosylase CHH28_RS03830 d5bdf1b5697b596275cbddf210ba157c 519 Gene3D G3DSA:2.130.10.10 205 492 1.2E-10 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CHH28_RS03830 d5bdf1b5697b596275cbddf210ba157c 519 SUPERFAMILY SSF50939 193 366 1.26E-6 T 29-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CHH28_RS03830 d5bdf1b5697b596275cbddf210ba157c 519 Gene3D G3DSA:1.20.1170.10 10 204 5.0E-5 T 29-03-2018 CHH28_RS06865 91367a37ba0436e6abb6fc6639275a08 291 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site CHH28_RS06865 91367a37ba0436e6abb6fc6639275a08 291 Gene3D G3DSA:1.10.600.10 1 291 5.3E-84 T 29-03-2018 IPR008949 Isoprenoid synthase domain CHH28_RS06865 91367a37ba0436e6abb6fc6639275a08 291 SUPERFAMILY SSF48576 6 285 9.12E-85 T 29-03-2018 IPR008949 Isoprenoid synthase domain CHH28_RS06865 91367a37ba0436e6abb6fc6639275a08 291 Pfam PF00348 Polyprenyl synthetase 30 261 1.9E-60 T 29-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 CHH28_RS06865 91367a37ba0436e6abb6fc6639275a08 291 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 210 222 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site CHH28_RS13220 7b11d2cb55273890176008d2f5f6126c 405 SUPERFAMILY SSF53383 7 401 1.36E-94 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS13220 7b11d2cb55273890176008d2f5f6126c 405 Pfam PF00155 Aminotransferase class I and II 36 394 2.4E-48 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CHH28_RS13220 7b11d2cb55273890176008d2f5f6126c 405 Gene3D G3DSA:3.40.640.10 53 280 1.1E-48 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CHH28_RS13220 7b11d2cb55273890176008d2f5f6126c 405 Gene3D G3DSA:3.90.1150.10 281 405 3.7E-24 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS17070 89de21e584702b4c50868fdc4deaaac1 125 Pfam PF11325 Domain of unknown function (DUF3127) 6 97 8.1E-25 T 29-03-2018 IPR021474 Protein of unknown function DUF3127 CHH28_RS09790 b825fb9e4074bdbd82482c1d12607faf 289 Pfam PF17113 Regulatory signalling modulator protein AmpE 55 248 1.9E-14 T 29-03-2018 IPR031347 Protein AmpE CHH28_RS12170 fb928cff04a3d2b1e67ad6adc95a83f4 143 Pfam PF05117 Family of unknown function (DUF695) 7 136 2.6E-27 T 29-03-2018 IPR016097 Domain of unknown function DUF695 CHH28_RS07215 6b4f1d0d0db85ae6a829dca3cc93b95e 137 SUPERFAMILY SSF55021 72 133 6.68E-19 T 29-03-2018 CHH28_RS07215 6b4f1d0d0db85ae6a829dca3cc93b95e 137 Pfam PF13840 ACT domain 74 130 2.0E-10 T 29-03-2018 IPR027795 GATS-like ACT domain CHH28_RS07215 6b4f1d0d0db85ae6a829dca3cc93b95e 137 SUPERFAMILY SSF55021 2 60 4.26E-13 T 29-03-2018 CHH28_RS07215 6b4f1d0d0db85ae6a829dca3cc93b95e 137 Gene3D G3DSA:3.30.2130.10 1 135 4.9E-26 T 29-03-2018 CHH28_RS07215 6b4f1d0d0db85ae6a829dca3cc93b95e 137 Pfam PF10000 ACT domain 2 60 1.1E-17 T 29-03-2018 IPR018717 Domain of unknown function DUF2241 CHH28_RS17620 4e837a41426877e0e7e8f85f29ce71ef 390 SUPERFAMILY SSF48452 43 243 7.59E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS17620 4e837a41426877e0e7e8f85f29ce71ef 390 Gene3D G3DSA:1.25.40.10 22 154 2.7E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS17620 4e837a41426877e0e7e8f85f29ce71ef 390 Gene3D G3DSA:1.25.40.10 155 329 2.3E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS15340 012c37d749250ae1ab87d670a278493d 491 SUPERFAMILY SSF50998 176 329 1.91E-7 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CHH28_RS15340 012c37d749250ae1ab87d670a278493d 491 Gene3D G3DSA:2.140.10.10 25 347 2.1E-6 T 29-03-2018 CHH28_RS15455 0a6ec54f0cc643616be7c7f69b4bfe04 211 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 187 5.3E-36 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CHH28_RS13225 591fcfde11b14c01aef5d81f9586d0b5 137 Gene3D G3DSA:2.170.150.20 1 137 1.4E-59 T 29-03-2018 CHH28_RS13225 591fcfde11b14c01aef5d81f9586d0b5 137 Pfam PF01641 SelR domain 10 128 4.8E-53 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CHH28_RS13225 591fcfde11b14c01aef5d81f9586d0b5 137 SUPERFAMILY SSF51316 5 133 2.77E-58 T 29-03-2018 IPR011057 Mss4-like CHH28_RS13225 591fcfde11b14c01aef5d81f9586d0b5 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 6 134 4.9E-56 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CHH28_RS13225 591fcfde11b14c01aef5d81f9586d0b5 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 130 36.298 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CHH28_RS15565 a4d35cdb28aa011d8bbfe2e817d76ade 303 Gene3D G3DSA:3.40.630.30 6 136 4.2E-26 T 29-03-2018 CHH28_RS15565 a4d35cdb28aa011d8bbfe2e817d76ade 303 Pfam PF13673 Acetyltransferase (GNAT) domain 39 136 2.9E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS15565 a4d35cdb28aa011d8bbfe2e817d76ade 303 SUPERFAMILY SSF55729 4 134 3.14E-29 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS07705 f6feb6cfe22d351f50b55c586193d465 127 Pfam PF04237 YjbR 12 101 5.9E-29 T 29-03-2018 IPR007351 Uncharacterised protein YjbR CHH28_RS07705 f6feb6cfe22d351f50b55c586193d465 127 SUPERFAMILY SSF142906 1 115 2.35E-41 T 29-03-2018 CHH28_RS11075 0bcba7aa68170878724079423f413aab 378 Gene3D G3DSA:3.90.226.10 9 356 2.0E-71 T 29-03-2018 CHH28_RS11075 0bcba7aa68170878724079423f413aab 378 SUPERFAMILY SSF52096 279 349 9.52E-57 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS11075 0bcba7aa68170878724079423f413aab 378 SUPERFAMILY SSF52096 11 202 9.52E-57 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS11075 0bcba7aa68170878724079423f413aab 378 Pfam PF16113 Enoyl-CoA hydratase/isomerase 21 362 3.8E-96 T 29-03-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 CHH28_RS16215 bc00b2ad07ad59e7668b054be44d68f1 242 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 39 235 1.6E-37 T 29-03-2018 IPR006214 Bax inhibitor 1-related CHH28_RS15160 5287d37ef676b31896d1854e1687fcb9 368 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 14 356 2.3E-109 T 29-03-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 CHH28_RS15160 5287d37ef676b31896d1854e1687fcb9 368 Pfam PF03739 Predicted permease YjgP/YjgQ family 17 355 5.4E-72 T 29-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CHH28_RS06295 69083d7f1fe784a3de08dfe5263f1870 186 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 2 175 2.4E-30 T 29-03-2018 IPR003740 Uncharacterised membrane protein YitT CHH28_RS04325 485a38714b01f2c7271a377b5e6c9ce3 110 Pfam PF07978 NIPSNAP 5 100 5.9E-26 T 29-03-2018 IPR012577 NIPSNAP CHH28_RS04325 485a38714b01f2c7271a377b5e6c9ce3 110 Gene3D G3DSA:3.30.70.100 1 105 7.6E-15 T 29-03-2018 CHH28_RS04325 485a38714b01f2c7271a377b5e6c9ce3 110 SUPERFAMILY SSF54909 1 101 7.11E-21 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CHH28_RS08145 bc916e90be6ffd6de564c7950846b3be 396 Pfam PF09375 Imelysin 64 351 2.8E-31 T 29-03-2018 IPR018976 Peptidase M75, Imelysin CHH28_RS07420 510a81241a161e02e2a9dd518cd0fa14 161 Gene3D G3DSA:3.40.630.30 8 161 7.7E-23 T 29-03-2018 CHH28_RS07420 510a81241a161e02e2a9dd518cd0fa14 161 SUPERFAMILY SSF55729 10 161 8.78E-30 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS07420 510a81241a161e02e2a9dd518cd0fa14 161 Pfam PF13673 Acetyltransferase (GNAT) domain 38 154 9.9E-19 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS01480 707eda5de5fb8aa921ac7d7934a2903e 238 SUPERFAMILY SSF75217 97 237 1.57E-28 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CHH28_RS01480 707eda5de5fb8aa921ac7d7934a2903e 238 Pfam PF00588 SpoU rRNA Methylase family 100 233 9.7E-26 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CHH28_RS01480 707eda5de5fb8aa921ac7d7934a2903e 238 Gene3D G3DSA:3.30.1330.30 1 88 2.8E-16 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like CHH28_RS01480 707eda5de5fb8aa921ac7d7934a2903e 238 SMART SM00967 22 92 0.0011 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CHH28_RS01480 707eda5de5fb8aa921ac7d7934a2903e 238 Gene3D G3DSA:3.40.1280.10 89 238 2.3E-30 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CHH28_RS01480 707eda5de5fb8aa921ac7d7934a2903e 238 SUPERFAMILY SSF55315 3 88 2.94E-16 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like CHH28_RS01480 707eda5de5fb8aa921ac7d7934a2903e 238 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 22 88 4.0E-6 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CHH28_RS16930 b9493fd5e83f48d2a7c7eaf310a96c34 294 SUPERFAMILY SSF69593 9 283 1.83E-37 T 29-03-2018 CHH28_RS16930 b9493fd5e83f48d2a7c7eaf310a96c34 294 Gene3D G3DSA:3.40.1130.10 45 294 6.7E-23 T 29-03-2018 CHH28_RS16930 b9493fd5e83f48d2a7c7eaf310a96c34 294 Pfam PF01553 Acyltransferase 74 225 2.1E-16 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CHH28_RS16930 b9493fd5e83f48d2a7c7eaf310a96c34 294 SMART SM00563 84 226 6.3E-13 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CHH28_RS07185 cb3221ca6289aedd72c591f86b753941 347 Pfam PF12151 Mannan-binding protein 311 346 1.6E-8 T 29-03-2018 IPR021992 Mannan-binding protein CHH28_RS14585 6a091c7863d2bac42c6f3846b34f3290 605 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 7 604 2.1E-132 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like CHH28_RS14585 6a091c7863d2bac42c6f3846b34f3290 605 PIRSF PIRSF028304 1 605 2.2E-116 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like CHH28_RS14585 6a091c7863d2bac42c6f3846b34f3290 605 Pfam PF05947 Type VI secretion system, TssF 7 603 4.2E-139 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like CHH28_RS02785 1aa001bdc6a8daf830bd5bcc40437cbd 355 Pfam PF11279 Protein of unknown function (DUF3080) 36 353 5.8E-73 T 29-03-2018 IPR021431 Protein of unknown function DUF3080 CHH28_RS00005 59ab7332b75f2a60cdd9a83e5f68c491 217 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 48 206 2.4E-45 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS00005 59ab7332b75f2a60cdd9a83e5f68c491 217 Pfam PF00990 Diguanylate cyclase, GGDEF domain 52 203 4.4E-43 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS00005 59ab7332b75f2a60cdd9a83e5f68c491 217 SMART SM00267 40 208 8.3E-55 T 29-03-2018 IPR000160 GGDEF domain CHH28_RS00005 59ab7332b75f2a60cdd9a83e5f68c491 217 SUPERFAMILY SSF55073 56 206 1.57E-44 T 29-03-2018 IPR029787 Nucleotide cyclase CHH28_RS00005 59ab7332b75f2a60cdd9a83e5f68c491 217 Gene3D G3DSA:3.30.70.270 44 215 1.6E-50 T 29-03-2018 CHH28_RS09895 1928f393259b88dee9d949de912f59ce 395 Pfam PF13511 Domain of unknown function (DUF4124) 114 137 7.7E-8 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 CHH28_RS03670 79c9bae56765114e0278b501553d6520 274 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 136 170 - T 29-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 CHH28_RS03670 79c9bae56765114e0278b501553d6520 274 Pfam PF00924 Mechanosensitive ion channel 70 261 2.5E-55 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CHH28_RS03670 79c9bae56765114e0278b501553d6520 274 Gene3D G3DSA:2.30.30.60 122 171 1.6E-17 T 29-03-2018 CHH28_RS03670 79c9bae56765114e0278b501553d6520 274 SUPERFAMILY SSF82689 175 271 9.42E-34 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CHH28_RS03670 79c9bae56765114e0278b501553d6520 274 SUPERFAMILY SSF82861 21 105 7.32E-16 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CHH28_RS03670 79c9bae56765114e0278b501553d6520 274 SUPERFAMILY SSF50182 106 172 4.9E-18 T 29-03-2018 IPR010920 LSM domain CHH28_RS03670 79c9bae56765114e0278b501553d6520 274 Gene3D G3DSA:3.30.70.100 172 266 7.3E-28 T 29-03-2018 CHH28_RS06545 a14b7f8af8f77d5c5db736ddd85421d3 159 Gene3D G3DSA:3.40.630.30 2 153 9.3E-23 T 29-03-2018 CHH28_RS06545 a14b7f8af8f77d5c5db736ddd85421d3 159 Pfam PF13302 Acetyltransferase (GNAT) domain 5 135 2.4E-26 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS06545 a14b7f8af8f77d5c5db736ddd85421d3 159 SUPERFAMILY SSF55729 4 137 2.48E-29 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS12915 8ac06eaa2c40fbe111126add10959d52 153 Gene3D G3DSA:2.60.40.10 3 98 7.8E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS12915 8ac06eaa2c40fbe111126add10959d52 153 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 39 144 5.7E-22 T 29-03-2018 IPR018673 Protein of unknown function DUF2141 CHH28_RS18750 d323bef51f7a919d76df246879a69053 178 Pfam PF03748 Flagellar basal body-associated protein FliL 77 178 5.5E-20 T 29-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CHH28_RS08655 1136d970f385961bc50a3c871255bd85 320 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 6 310 7.2E-77 T 29-03-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 CHH28_RS08655 1136d970f385961bc50a3c871255bd85 320 Pfam PF01699 Sodium/calcium exchanger protein 172 315 1.6E-29 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CHH28_RS08655 1136d970f385961bc50a3c871255bd85 320 Pfam PF01699 Sodium/calcium exchanger protein 5 143 2.4E-24 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CHH28_RS16870 81c97187f74ed9bd4fc68932ad5c99cc 110 SUPERFAMILY SSF160544 16 94 4.97E-22 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CHH28_RS16870 81c97187f74ed9bd4fc68932ad5c99cc 110 Pfam PF01312 FlhB HrpN YscU SpaS Family 17 90 7.0E-19 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CHH28_RS16870 81c97187f74ed9bd4fc68932ad5c99cc 110 Gene3D G3DSA:3.40.1690.10 15 94 4.0E-25 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CHH28_RS00580 6997f9aabd4898682a1f42414cc1380c 143 SUPERFAMILY SSF55961 1 143 2.04E-35 T 29-03-2018 CHH28_RS00580 6997f9aabd4898682a1f42414cc1380c 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 12 134 9.1E-32 T 29-03-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 CHH28_RS00580 6997f9aabd4898682a1f42414cc1380c 143 Gene3D G3DSA:3.30.530.20 1 143 3.4E-32 T 29-03-2018 IPR023393 START-like domain CHH28_RS10545 da8306ba028803eef7fd0dc1cdffea90 225 Pfam PF08856 Protein of unknown function (DUF1826) 19 222 1.4E-60 T 29-03-2018 IPR014955 Protein of unknown function DUF1826 CHH28_RS01870 fcf9d7d4ef116eef0235c7979c6a3730 254 SUPERFAMILY SSF53448 12 227 2.32E-52 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS01870 fcf9d7d4ef116eef0235c7979c6a3730 254 Gene3D G3DSA:3.90.550.10 5 253 5.1E-46 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CHH28_RS01870 fcf9d7d4ef116eef0235c7979c6a3730 254 Pfam PF00535 Glycosyl transferase family 2 14 129 8.5E-36 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CHH28_RS07450 41c3a68b8e465ff1924656c430e01194 205 SUPERFAMILY SSF81301 7 48 1.61E-9 T 29-03-2018 CHH28_RS07450 41c3a68b8e465ff1924656c430e01194 205 Pfam PF01909 Nucleotidyltransferase domain 9 47 2.1E-6 T 29-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CHH28_RS07450 41c3a68b8e465ff1924656c430e01194 205 Gene3D G3DSA:3.30.460.10 1 166 1.1E-10 T 29-03-2018 CHH28_RS17060 ca693ab3352fa71d0d5b0d99c9531a14 306 Pfam PF02558 Ketopantoate reductase PanE/ApbA 5 131 2.5E-10 T 29-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CHH28_RS17060 ca693ab3352fa71d0d5b0d99c9531a14 306 Gene3D G3DSA:3.40.50.720 1 178 3.7E-11 T 29-03-2018 CHH28_RS17060 ca693ab3352fa71d0d5b0d99c9531a14 306 SUPERFAMILY SSF51735 1 173 6.7E-8 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS01690 551a3aa53ca06dd4a483ae1b98264fe1 183 Pfam PF05137 Fimbrial assembly protein (PilN) 100 173 4.0E-19 T 29-03-2018 IPR007813 Fimbrial assembly PilN CHH28_RS18300 8a9e0f37178d914bfc222d37a6dd6f2d 82 Pfam PF07023 Protein of unknown function (DUF1315) 4 75 6.0E-26 T 29-03-2018 IPR009749 Protein of unknown function DUF1315 CHH28_RS18300 8a9e0f37178d914bfc222d37a6dd6f2d 82 Gene3D G3DSA:1.10.10.10 6 45 3.5E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS09410 ab29fb6de0fefe8d6f2d45d1147529c0 283 Pfam PF01618 MotA/TolQ/ExbB proton channel family 119 239 2.6E-11 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CHH28_RS09410 ab29fb6de0fefe8d6f2d45d1147529c0 283 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 1.1E-110 T 29-03-2018 IPR022522 Flagellar motor stator, MotA CHH28_RS09410 ab29fb6de0fefe8d6f2d45d1147529c0 283 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 29-03-2018 IPR000540 Flagellar motor protein MotA, conserved site CHH28_RS09285 4fe56d96085ccf7b05baa00f19d19a4c 264 SUPERFAMILY SSF53850 32 249 4.83E-29 T 29-03-2018 CHH28_RS09285 4fe56d96085ccf7b05baa00f19d19a4c 264 Gene3D G3DSA:3.40.190.10 147 252 4.8E-9 T 29-03-2018 CHH28_RS09285 4fe56d96085ccf7b05baa00f19d19a4c 264 Gene3D G3DSA:3.40.190.10 25 126 2.9E-10 T 29-03-2018 CHH28_RS09285 4fe56d96085ccf7b05baa00f19d19a4c 264 SMART SM00062 31 252 0.0026 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS09285 4fe56d96085ccf7b05baa00f19d19a4c 264 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 248 1.0E-15 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS12295 54367887c80e26031fa3241dd09a6eab 378 Gene3D G3DSA:2.40.160.10 8 373 1.7E-32 T 29-03-2018 CHH28_RS12295 54367887c80e26031fa3241dd09a6eab 378 Pfam PF13609 Gram-negative porin 8 329 1.5E-26 T 29-03-2018 CHH28_RS12295 54367887c80e26031fa3241dd09a6eab 378 SUPERFAMILY SSF56935 20 44 1.15E-28 T 29-03-2018 CHH28_RS12295 54367887c80e26031fa3241dd09a6eab 378 SUPERFAMILY SSF56935 73 378 1.15E-28 T 29-03-2018 CHH28_RS05305 86999109c39fe804efd15e69082420c5 249 Gene3D G3DSA:2.40.160.20 17 249 2.4E-4 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS05305 86999109c39fe804efd15e69082420c5 249 Pfam PF04338 Protein of unknown function, DUF481 43 249 1.9E-58 T 29-03-2018 IPR007433 Protein of unknown function DUF481 CHH28_RS13755 a05f10b15c0048f195987d8ab0c9abe8 345 Gene3D G3DSA:3.20.20.100 1 345 5.4E-97 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CHH28_RS13755 a05f10b15c0048f195987d8ab0c9abe8 345 SUPERFAMILY SSF51430 1 338 9.04E-110 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CHH28_RS13755 a05f10b15c0048f195987d8ab0c9abe8 345 Pfam PF00248 Aldo/keto reductase family 15 336 1.5E-73 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CHH28_RS19470 63a7d86f61a59f4793109a0ba21d1f10 234 SUPERFAMILY SSF56784 1 229 4.72E-52 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS19470 63a7d86f61a59f4793109a0ba21d1f10 234 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 226 1.7E-72 T 29-03-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 CHH28_RS19470 63a7d86f61a59f4793109a0ba21d1f10 234 Gene3D G3DSA:3.40.50.1000 87 233 4.8E-10 T 29-03-2018 IPR023214 HAD-like domain CHH28_RS19470 63a7d86f61a59f4793109a0ba21d1f10 234 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 2 229 38.06 T 29-03-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 CHH28_RS16485 06b489b4412f57d9ec04a1ee32a6b59b 202 Pfam PF01810 LysE type translocator 14 198 9.8E-20 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS09645 4ab18e3240cbc3f5a961b1b848f73988 318 Pfam PF00849 RNA pseudouridylate synthase 91 240 4.4E-33 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS09645 4ab18e3240cbc3f5a961b1b848f73988 318 Gene3D G3DSA:3.10.290.10 2 74 1.2E-12 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CHH28_RS09645 4ab18e3240cbc3f5a961b1b848f73988 318 SUPERFAMILY SSF55174 18 66 1.01E-5 T 29-03-2018 CHH28_RS09645 4ab18e3240cbc3f5a961b1b848f73988 318 Gene3D G3DSA:3.30.2350.10 82 315 1.9E-70 T 29-03-2018 CHH28_RS09645 4ab18e3240cbc3f5a961b1b848f73988 318 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS09645 4ab18e3240cbc3f5a961b1b848f73988 318 SUPERFAMILY SSF55120 76 312 6.12E-79 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS09645 4ab18e3240cbc3f5a961b1b848f73988 318 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 311 2.8E-98 T 29-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CHH28_RS07690 28e1b441e9e516618a719f69592f2daf 221 Gene3D G3DSA:1.10.8.200 43 110 2.9E-4 T 29-03-2018 CHH28_RS08665 b11624f755137b0cbc7b94d0e866d1aa 258 Pfam PF02405 Permease MlaE 42 253 7.5E-76 T 29-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 CHH28_RS08665 b11624f755137b0cbc7b94d0e866d1aa 258 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 256 4.9E-89 T 29-03-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CHH28_RS02725 66d101d042d20a07153be3fd706b4f80 285 TIGRFAM TIGR04052 AZL_007920_fam: AZL_007920/MXAN_0976 family protein 63 262 7.4E-59 T 29-03-2018 IPR023977 Conserved hypotheical protein CHP04052 CHH28_RS04715 96dc012a31d30ab11565e0269224d7e7 254 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 11 220 2.0E-36 T 29-03-2018 CHH28_RS17595 ca25997f35e5ec40d1c5181c8831523b 121 Pfam PF09842 Predicted membrane protein (DUF2069) 12 111 1.3E-9 T 29-03-2018 IPR018643 Protein of unknown function DUF2069, membrane CHH28_RS00310 ba05a4f04d3d5c2856fea7c1afc8aae2 383 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 17 373 7.5E-122 T 29-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CHH28_RS00310 ba05a4f04d3d5c2856fea7c1afc8aae2 383 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 332 356 - T 29-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CHH28_RS00310 ba05a4f04d3d5c2856fea7c1afc8aae2 383 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 12 382 37.221 T 29-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CHH28_RS00310 ba05a4f04d3d5c2856fea7c1afc8aae2 383 Pfam PF01098 Cell cycle protein 19 374 1.7E-100 T 29-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 CHH28_RS13990 a08f372e99718f4d83d05e913d2831dd 527 SUPERFAMILY SSF47226 411 517 1.18E-5 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS13990 a08f372e99718f4d83d05e913d2831dd 527 SUPERFAMILY SSF47226 3 115 8.54E-7 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CHH28_RS13990 a08f372e99718f4d83d05e913d2831dd 527 Gene3D G3DSA:1.20.120.160 1 122 5.1E-4 T 29-03-2018 CHH28_RS13990 a08f372e99718f4d83d05e913d2831dd 527 Gene3D G3DSA:1.20.120.160 402 527 4.8E-5 T 29-03-2018 CHH28_RS18710 a318433bfbacbcc9601d19984a672c82 733 PIRSF PIRSF005419 8 733 8.2E-240 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CHH28_RS18710 a318433bfbacbcc9601d19984a672c82 733 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 728 1.4E-260 T 29-03-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 CHH28_RS18710 a318433bfbacbcc9601d19984a672c82 733 Pfam PF00771 FHIPEP family 33 719 2.4E-266 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CHH28_RS18710 a318433bfbacbcc9601d19984a672c82 733 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 39 52 2.4E-55 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CHH28_RS18710 a318433bfbacbcc9601d19984a672c82 733 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 243 257 2.4E-55 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CHH28_RS18710 a318433bfbacbcc9601d19984a672c82 733 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 192 209 2.4E-55 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CHH28_RS18710 a318433bfbacbcc9601d19984a672c82 733 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 76 95 2.4E-55 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CHH28_RS18710 a318433bfbacbcc9601d19984a672c82 733 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 162 180 2.4E-55 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CHH28_RS18710 a318433bfbacbcc9601d19984a672c82 733 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 143 159 2.4E-55 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CHH28_RS05060 bdcad4c1f84db7425147bf5f09087986 203 Pfam PF01810 LysE type translocator 16 202 2.5E-26 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS03275 b1c1026b67a9ab2f3b56b3948326ca51 164 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.033 T 29-03-2018 IPR022927 RNA pyrophosphohydrolase RppH CHH28_RS03275 b1c1026b67a9ab2f3b56b3948326ca51 164 Gene3D G3DSA:3.90.79.10 1 163 1.2E-31 T 29-03-2018 CHH28_RS03275 b1c1026b67a9ab2f3b56b3948326ca51 164 Pfam PF00293 NUDIX domain 7 144 5.0E-28 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CHH28_RS03275 b1c1026b67a9ab2f3b56b3948326ca51 164 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.7E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CHH28_RS03275 b1c1026b67a9ab2f3b56b3948326ca51 164 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.7E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CHH28_RS03275 b1c1026b67a9ab2f3b56b3948326ca51 164 SUPERFAMILY SSF55811 5 159 1.07E-32 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CHH28_RS03275 b1c1026b67a9ab2f3b56b3948326ca51 164 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CHH28_RS04755 0a8a61199cc831d2ab08301a5831676f 90 SMART SM00411 1 90 6.4E-39 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS04755 0a8a61199cc831d2ab08301a5831676f 90 Gene3D G3DSA:4.10.520.10 1 90 2.3E-34 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CHH28_RS04755 0a8a61199cc831d2ab08301a5831676f 90 SUPERFAMILY SSF47729 1 90 2.8E-31 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CHH28_RS04755 0a8a61199cc831d2ab08301a5831676f 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 5.3E-33 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS04755 0a8a61199cc831d2ab08301a5831676f 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CHH28_RS04755 0a8a61199cc831d2ab08301a5831676f 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.0E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS04755 0a8a61199cc831d2ab08301a5831676f 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.0E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS04755 0a8a61199cc831d2ab08301a5831676f 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.0E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CHH28_RS02160 ea5c008b1e88ddc6dcaf6a5b40f1e24a 240 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 208 228 3.5E-7 T 29-03-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 CHH28_RS08500 079921293be2b28550e7b1e9e14beaac 294 Gene3D G3DSA:3.40.50.720 4 280 2.7E-22 T 29-03-2018 CHH28_RS08500 079921293be2b28550e7b1e9e14beaac 294 Pfam PF13460 NAD(P)H-binding 11 167 3.7E-20 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS08500 079921293be2b28550e7b1e9e14beaac 294 SUPERFAMILY SSF51735 8 243 1.06E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain CHH28_RS04710 6325194e12492901e8eb822581433588 233 Pfam PF00588 SpoU rRNA Methylase family 20 158 6.9E-35 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CHH28_RS04710 6325194e12492901e8eb822581433588 233 Gene3D G3DSA:3.40.1280.10 1 191 6.5E-48 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CHH28_RS04710 6325194e12492901e8eb822581433588 233 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 195 35.858 T 29-03-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 CHH28_RS04710 6325194e12492901e8eb822581433588 233 SUPERFAMILY SSF75217 4 187 7.19E-50 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CHH28_RS04710 6325194e12492901e8eb822581433588 233 Pfam PF12105 SpoU, rRNA methylase, C-terminal 164 214 9.0E-21 T 29-03-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 CHH28_RS09350 c906583ba6019690b4ae3069b465ccb9 142 SUPERFAMILY SSF53850 21 138 5.43E-18 T 29-03-2018 CHH28_RS09350 c906583ba6019690b4ae3069b465ccb9 142 Gene3D G3DSA:3.40.190.10 24 140 6.4E-14 T 29-03-2018 CHH28_RS11065 075da43143809a3da6b54e54b72591d0 319 SUPERFAMILY SSF53474 42 310 6.35E-57 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS11065 075da43143809a3da6b54e54b72591d0 319 Pfam PF12697 Alpha/beta hydrolase family 66 300 1.3E-21 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS11065 075da43143809a3da6b54e54b72591d0 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 146 159 7.4E-15 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS11065 075da43143809a3da6b54e54b72591d0 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 104 7.4E-15 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS11065 075da43143809a3da6b54e54b72591d0 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 255 269 7.4E-15 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS11065 075da43143809a3da6b54e54b72591d0 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 132 145 7.4E-15 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS11065 075da43143809a3da6b54e54b72591d0 319 Gene3D G3DSA:3.40.50.1820 16 319 4.4E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS18610 6abaa42f6754f4a13f24bd912c018540 151 Gene3D G3DSA:3.10.20.30 11 150 1.0E-15 T 29-03-2018 IPR012675 Beta-grasp domain CHH28_RS18610 6abaa42f6754f4a13f24bd912c018540 151 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 104 112 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CHH28_RS18610 6abaa42f6754f4a13f24bd912c018540 151 SUPERFAMILY SSF54292 75 151 1.15E-19 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CHH28_RS18610 6abaa42f6754f4a13f24bd912c018540 151 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 85 144 1.7E-11 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CHH28_RS06370 8a1b73179de31bc299694427d70d0a4f 262 SMART SM00382 26 221 1.4E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS06370 8a1b73179de31bc299694427d70d0a4f 262 Gene3D G3DSA:3.40.50.300 1 259 2.2E-52 T 29-03-2018 CHH28_RS06370 8a1b73179de31bc299694427d70d0a4f 262 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS06370 8a1b73179de31bc299694427d70d0a4f 262 Pfam PF00005 ABC transporter 17 149 2.0E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS06370 8a1b73179de31bc299694427d70d0a4f 262 SUPERFAMILY SSF52540 2 231 1.45E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS14635 8f811ce580e650173566c0981260a3bb 960 Pfam PF05954 Phage late control gene D protein (GPD) 43 379 2.1E-25 T 29-03-2018 CHH28_RS14635 8f811ce580e650173566c0981260a3bb 960 Gene3D G3DSA:3.55.50.10 119 213 4.1E-12 T 29-03-2018 CHH28_RS14635 8f811ce580e650173566c0981260a3bb 960 SUPERFAMILY SSF69279 30 210 1.02E-24 T 29-03-2018 CHH28_RS10585 d1c547d4888985f539c547294d6f7ac1 392 Gene3D G3DSA:1.10.10.10 275 391 2.3E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS10585 d1c547d4888985f539c547294d6f7ac1 392 Pfam PF13884 Chaperone of endosialidase 282 335 5.3E-12 T 29-03-2018 IPR030392 Intramolecular chaperone auto-processing domain CHH28_RS04095 ebd8b4f76d71a1270b11c384777916ce 146 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 12 145 6.7E-37 T 29-03-2018 IPR010706 Fatty acid cis-trans isomerase CHH28_RS18955 6fde4946ef7a3e13020f4b7b6fc15edb 263 Pfam PF03963 Flagellar hook capping protein - N-terminal region 9 77 9.8E-22 T 29-03-2018 IPR005648 Flagellar hook capping protein CHH28_RS18955 6fde4946ef7a3e13020f4b7b6fc15edb 263 Pfam PF13861 FlgD Tudor-like domain 88 258 3.0E-13 T 29-03-2018 IPR025963 FlgD Tudor-like domain CHH28_RS18955 6fde4946ef7a3e13020f4b7b6fc15edb 263 Pfam PF13860 FlgD Ig-like domain 109 162 3.2E-7 T 29-03-2018 IPR025965 FlgD Ig-like domain CHH28_RS17860 00b73970ca0bcc58ed09805002cdb4b6 275 Gene3D G3DSA:2.30.110.10 147 266 4.2E-8 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CHH28_RS17860 00b73970ca0bcc58ed09805002cdb4b6 275 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 150 221 1.6E-4 T 29-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CHH28_RS17860 00b73970ca0bcc58ed09805002cdb4b6 275 SUPERFAMILY SSF50475 148 264 9.73E-14 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CHH28_RS11950 619462a5c63c9c25f630728d3a07abed 222 SUPERFAMILY SSF56024 9 117 5.76E-7 T 29-03-2018 CHH28_RS11950 619462a5c63c9c25f630728d3a07abed 222 Gene3D G3DSA:3.30.870.10 2 144 2.6E-8 T 29-03-2018 CHH28_RS19290 c795d1eced4845a7c592180785423377 234 SMART SM01144 26 221 9.1E-58 T 29-03-2018 IPR005636 DTW CHH28_RS19290 c795d1eced4845a7c592180785423377 234 Pfam PF03942 DTW domain 29 215 2.8E-38 T 29-03-2018 IPR005636 DTW CHH28_RS03860 442b9c2e794f3304ee2a8a3458f1a679 105 Pfam PF08809 Phage related hypothetical protein (DUF1799) 31 99 9.5E-16 T 29-03-2018 IPR014915 Bacteriophage TLS, TfmB CHH28_RS02175 d4c757f396ee560ed546a329d343833a 282 Gene3D G3DSA:2.30.30.60 106 163 4.9E-13 T 29-03-2018 CHH28_RS02175 d4c757f396ee560ed546a329d343833a 282 Pfam PF00924 Mechanosensitive ion channel 57 249 7.0E-12 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CHH28_RS02175 d4c757f396ee560ed546a329d343833a 282 SUPERFAMILY SSF50182 90 163 7.85E-10 T 29-03-2018 IPR010920 LSM domain CHH28_RS15980 0c5842dc10f0dbec36384068c9d17182 78 Gene3D G3DSA:3.40.30.10 1 78 7.8E-20 T 29-03-2018 CHH28_RS15980 0c5842dc10f0dbec36384068c9d17182 78 Pfam PF00462 Glutaredoxin 5 64 3.1E-12 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CHH28_RS15980 0c5842dc10f0dbec36384068c9d17182 78 PRINTS PR00160 Glutaredoxin signature 48 61 1.5E-7 T 29-03-2018 IPR014025 Glutaredoxin subgroup CHH28_RS15980 0c5842dc10f0dbec36384068c9d17182 78 PRINTS PR00160 Glutaredoxin signature 4 22 1.5E-7 T 29-03-2018 IPR014025 Glutaredoxin subgroup CHH28_RS15980 0c5842dc10f0dbec36384068c9d17182 78 PRINTS PR00160 Glutaredoxin signature 62 75 1.5E-7 T 29-03-2018 IPR014025 Glutaredoxin subgroup CHH28_RS15980 0c5842dc10f0dbec36384068c9d17182 78 SUPERFAMILY SSF52833 3 77 2.77E-17 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS06325 329499e0522f1d3c8ccaee68e948224e 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 169 1.8E-65 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CHH28_RS06325 329499e0522f1d3c8ccaee68e948224e 175 PIRSF PIRSF038996 1 173 3.4E-62 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CHH28_RS06325 329499e0522f1d3c8ccaee68e948224e 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CHH28_RS06325 329499e0522f1d3c8ccaee68e948224e 175 Pfam PF00258 Flavodoxin 6 161 7.4E-27 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CHH28_RS06325 329499e0522f1d3c8ccaee68e948224e 175 SUPERFAMILY SSF52218 3 169 6.83E-48 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS06325 329499e0522f1d3c8ccaee68e948224e 175 Gene3D G3DSA:3.40.50.360 77 175 7.9E-16 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS06325 329499e0522f1d3c8ccaee68e948224e 175 Gene3D G3DSA:3.40.50.360 1 76 6.6E-19 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS05665 96e46e673aaa1aae641c8a9c78fa3be4 391 Pfam PF07730 Histidine kinase 201 262 2.3E-12 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CHH28_RS05665 96e46e673aaa1aae641c8a9c78fa3be4 391 SUPERFAMILY SSF55874 270 385 3.17E-8 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS05665 96e46e673aaa1aae641c8a9c78fa3be4 391 Gene3D G3DSA:3.30.565.10 255 390 2.3E-12 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CHH28_RS13665 035e232f9565354ded111fcfac8841d2 467 Pfam PF04932 O-Antigen ligase 245 379 2.6E-16 T 29-03-2018 IPR007016 O-antigen ligase-related CHH28_RS03315 6b1bc7d29e6d43234372dce6168e782c 182 SUPERFAMILY SSF101327 3 168 1.57E-27 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CHH28_RS03315 6b1bc7d29e6d43234372dce6168e782c 182 Pfam PF03695 Uncharacterised protein family (UPF0149) 6 168 3.2E-27 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CHH28_RS13130 5c0cde1cd8ddb9c17da74ad57a9d59c9 195 SMART SM00987 30 188 5.1E-30 T 29-03-2018 CHH28_RS13130 5c0cde1cd8ddb9c17da74ad57a9d59c9 195 Pfam PF03167 Uracil DNA glycosylase superfamily 35 187 2.0E-24 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CHH28_RS13130 5c0cde1cd8ddb9c17da74ad57a9d59c9 195 SMART SM00986 30 188 5.1E-30 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CHH28_RS13130 5c0cde1cd8ddb9c17da74ad57a9d59c9 195 Gene3D G3DSA:3.40.470.10 1 195 4.3E-47 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CHH28_RS13130 5c0cde1cd8ddb9c17da74ad57a9d59c9 195 SUPERFAMILY SSF52141 6 194 3.27E-54 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CHH28_RS04925 f1cfd79982d9f939fed0182cc8a96d9e 89 Pfam PF11191 Protein of unknown function (DUF2782) 21 89 1.9E-20 T 29-03-2018 IPR021357 Protein of unknown function DUF2782 CHH28_RS11920 5bc3aaf47305308c74cff47c97c9b4f1 119 SMART SM00422 19 89 3.9E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS11920 5bc3aaf47305308c74cff47c97c9b4f1 119 SUPERFAMILY SSF46955 19 116 7.78E-19 T 29-03-2018 IPR009061 Putative DNA-binding domain CHH28_RS11920 5bc3aaf47305308c74cff47c97c9b4f1 119 Pfam PF13411 MerR HTH family regulatory protein 19 88 1.1E-21 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CHH28_RS11920 5bc3aaf47305308c74cff47c97c9b4f1 119 Gene3D G3DSA:1.10.1660.10 13 118 1.7E-26 T 29-03-2018 CHH28_RS10455 77a9086ae95068c378a6a144cd50d28c 956 Gene3D G3DSA:2.160.20.10 387 808 1.0E-10 T 29-03-2018 IPR012334 Pectin lyase fold CHH28_RS10455 77a9086ae95068c378a6a144cd50d28c 956 Gene3D G3DSA:2.60.40.10 29 110 2.7E-5 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS10455 77a9086ae95068c378a6a144cd50d28c 956 Gene3D G3DSA:2.60.40.10 208 294 1.5E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS10455 77a9086ae95068c378a6a144cd50d28c 956 Gene3D G3DSA:2.60.40.10 119 202 0.031 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS10455 77a9086ae95068c378a6a144cd50d28c 956 Gene3D G3DSA:2.60.40.10 298 385 0.063 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS10455 77a9086ae95068c378a6a144cd50d28c 956 SUPERFAMILY SSF51126 407 636 3.77E-6 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CHH28_RS18475 45d2b8edd5c3e007f06f379909e6d955 92 SUPERFAMILY SSF54534 3 87 1.96E-27 T 29-03-2018 CHH28_RS18475 45d2b8edd5c3e007f06f379909e6d955 92 Gene3D G3DSA:3.10.50.40 2 92 1.7E-30 T 29-03-2018 CHH28_RS18475 45d2b8edd5c3e007f06f379909e6d955 92 Pfam PF00639 PPIC-type PPIASE domain 12 87 9.3E-21 T 29-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CHH28_RS18475 45d2b8edd5c3e007f06f379909e6d955 92 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CHH28_RS04880 97595e978a7e20bf8c0be9fcc252edef 682 Gene3D G3DSA:1.20.1050.40 4 138 1.3E-39 T 29-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal CHH28_RS04880 97595e978a7e20bf8c0be9fcc252edef 682 Gene3D G3DSA:1.10.1370.10 140 435 1.6E-58 T 29-03-2018 CHH28_RS04880 97595e978a7e20bf8c0be9fcc252edef 682 Gene3D G3DSA:1.10.1370.10 454 682 9.1E-68 T 29-03-2018 CHH28_RS04880 97595e978a7e20bf8c0be9fcc252edef 682 SUPERFAMILY SSF55486 1 675 4.88E-210 T 29-03-2018 CHH28_RS04880 97595e978a7e20bf8c0be9fcc252edef 682 Pfam PF01432 Peptidase family M3 222 675 4.3E-155 T 29-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CHH28_RS17205 f32fe8d550cbe717e839f76193262496 359 Pfam PF14302 Domain of unknown function (DUF4377) 196 249 2.1E-6 T 29-03-2018 IPR025485 Domain of unknown function DUF4377 CHH28_RS04245 ef3f39c815008a22004e5da2419bd19e 161 Pfam PF11158 Protein of unknown function (DUF2938) 8 155 5.0E-56 T 29-03-2018 IPR021329 Protein of unknown function DUF2938 CHH28_RS16620 c41ef3ab2df2c2c829d3b89ad66bd1f2 153 Pfam PF06355 Aegerolysin 6 141 5.2E-6 T 29-03-2018 IPR009413 Hemolysin, aegerolysin type GO:0019836 CHH28_RS16620 c41ef3ab2df2c2c829d3b89ad66bd1f2 153 Gene3D G3DSA:2.60.270.20 1 149 4.1E-13 T 29-03-2018 CHH28_RS02905 595f71524a2ec2b142c91a1fe95c8a94 236 Gene3D G3DSA:1.25.40.10 31 96 6.9E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS02905 595f71524a2ec2b142c91a1fe95c8a94 236 SUPERFAMILY SSF48452 33 211 4.93E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS02905 595f71524a2ec2b142c91a1fe95c8a94 236 Gene3D G3DSA:1.25.40.10 100 231 1.8E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS02905 595f71524a2ec2b142c91a1fe95c8a94 236 Pfam PF14559 Tetratricopeptide repeat 41 91 1.1E-6 T 29-03-2018 CHH28_RS17545 6f40d90573e66123830fab8c3f53783c 554 Pfam PF05960 Bacterial protein of unknown function (DUF885) 46 548 2.2E-35 T 29-03-2018 IPR010281 Protein of unknown function DUF885 CHH28_RS10665 646ba725cd8a47a0efb2b23f589d2c96 634 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 13 625 3.8E-180 T 29-03-2018 IPR011853 TRAP transporter, 4TM/12TM fusion protein CHH28_RS10665 646ba725cd8a47a0efb2b23f589d2c96 634 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 115 529 5.5E-83 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CHH28_RS19355 e31c5d39b9a13ee78a1800d2b741b242 236 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 236 51.366 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein CHH28_RS19355 e31c5d39b9a13ee78a1800d2b741b242 236 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 5 236 6.1E-62 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein CHH28_RS19355 e31c5d39b9a13ee78a1800d2b741b242 236 Pfam PF03749 Sugar fermentation stimulation protein 13 222 4.8E-73 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein CHH28_RS11635 813104021588ec014531d069718e5b1f 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 134 8.2E-34 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CHH28_RS15305 a688deb96e71b46ee81f9b630f52e7a9 256 Pfam PF02754 Cysteine-rich domain 145 228 6.0E-10 T 29-03-2018 IPR004017 Cysteine-rich domain CHH28_RS15305 a688deb96e71b46ee81f9b630f52e7a9 256 Pfam PF02754 Cysteine-rich domain 23 98 6.9E-10 T 29-03-2018 IPR004017 Cysteine-rich domain CHH28_RS18810 3220eda219f6bfbe9c0eac14c11f9c27 95 SUPERFAMILY SSF52091 6 87 1.96E-11 T 29-03-2018 IPR002645 STAS domain CHH28_RS18810 3220eda219f6bfbe9c0eac14c11f9c27 95 Pfam PF13466 STAS domain 9 83 6.3E-16 T 29-03-2018 IPR002645 STAS domain CHH28_RS18810 3220eda219f6bfbe9c0eac14c11f9c27 95 Gene3D G3DSA:3.30.750.24 3 94 1.5E-8 T 29-03-2018 IPR002645 STAS domain CHH28_RS06515 13336c305aaf395da88427f7c9fc9ea7 124 Gene3D G3DSA:1.20.5.340 5 115 3.3E-6 T 29-03-2018 CHH28_RS05690 4e9adccc0090fc275d802824e4548891 456 Gene3D G3DSA:1.20.1600.10 33 456 2.3E-60 T 29-03-2018 CHH28_RS05690 4e9adccc0090fc275d802824e4548891 456 SUPERFAMILY SSF56954 22 453 7.46E-74 T 29-03-2018 CHH28_RS05690 4e9adccc0090fc275d802824e4548891 456 Pfam PF02321 Outer membrane efflux protein 269 451 2.4E-21 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CHH28_RS05690 4e9adccc0090fc275d802824e4548891 456 Pfam PF02321 Outer membrane efflux protein 71 250 8.3E-16 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CHH28_RS11660 be82b7944bdeef1b11fab516b0c0b858 159 Pfam PF11163 Protein of unknown function (DUF2947) 3 155 5.8E-57 T 29-03-2018 IPR021334 Protein of unknown function DUF2947 CHH28_RS13740 61f5031b9919981524ce6531f5867c80 672 SUPERFAMILY SSF54001 276 590 1.54E-60 T 29-03-2018 CHH28_RS13740 61f5031b9919981524ce6531f5867c80 672 Pfam PF01841 Transglutaminase-like superfamily 365 470 1.1E-23 T 29-03-2018 IPR002931 Transglutaminase-like CHH28_RS13740 61f5031b9919981524ce6531f5867c80 672 Gene3D G3DSA:3.90.260.10 371 485 1.2E-19 T 29-03-2018 IPR002931 Transglutaminase-like CHH28_RS13740 61f5031b9919981524ce6531f5867c80 672 SMART SM00460 401 472 6.6E-19 T 29-03-2018 IPR002931 Transglutaminase-like CHH28_RS13740 61f5031b9919981524ce6531f5867c80 672 Pfam PF11992 Domain of unknown function (DUF3488) 11 326 1.7E-96 T 29-03-2018 IPR021878 Protein of unknown function DUF3488 CHH28_RS01565 55248a1f5867afa00d514df9b24c1e94 190 Gene3D G3DSA:1.10.10.10 125 190 6.6E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS01565 55248a1f5867afa00d514df9b24c1e94 190 SUPERFAMILY SSF51206 18 132 8.77E-16 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CHH28_RS01565 55248a1f5867afa00d514df9b24c1e94 190 Gene3D G3DSA:2.60.120.10 6 124 9.5E-8 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS14605 3a47c56865efe57db7b487d135e1c780 254 Pfam PF09850 Type VI secretion system protein DotU 53 240 4.6E-24 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU CHH28_RS10940 236a4cb4e366102c0c851aba55c0e713 349 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 29 349 1.3E-164 T 29-03-2018 IPR016936 Uncharacterised conserved protein UCP029693 CHH28_RS10940 236a4cb4e366102c0c851aba55c0e713 349 PIRSF PIRSF029693 2 349 3.1E-163 T 29-03-2018 IPR016936 Uncharacterised conserved protein UCP029693 CHH28_RS16825 3db888d38346c8623fb7a526dab6060e 152 Pfam PF03918 Cytochrome C biogenesis protein 8 146 3.0E-50 T 29-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family CHH28_RS06620 8d0fedcac7c1c2c26810f8f6dfe8ed09 183 PIRSF PIRSF039093 1 175 5.4E-86 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CHH28_RS06620 8d0fedcac7c1c2c26810f8f6dfe8ed09 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 3.8E-85 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CHH28_RS06620 8d0fedcac7c1c2c26810f8f6dfe8ed09 183 Gene3D G3DSA:3.60.20.10 2 174 1.7E-28 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS06620 8d0fedcac7c1c2c26810f8f6dfe8ed09 183 SUPERFAMILY SSF56235 1 172 1.1E-56 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CHH28_RS06620 8d0fedcac7c1c2c26810f8f6dfe8ed09 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.599 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CHH28_RS06620 8d0fedcac7c1c2c26810f8f6dfe8ed09 183 Pfam PF00227 Proteasome subunit 2 171 3.9E-21 T 29-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CHH28_RS04215 de53129014defb8596a92bc47855aaf9 132 Pfam PF13781 DoxX-like family 16 116 6.4E-21 T 29-03-2018 IPR025695 DoxX-like family CHH28_RS02265 a67abd2cf3c85c015427540fd87c1d39 246 Gene3D G3DSA:3.40.190.10 16 235 2.0E-7 T 29-03-2018 CHH28_RS02265 a67abd2cf3c85c015427540fd87c1d39 246 SUPERFAMILY SSF53850 21 194 1.03E-11 T 29-03-2018 CHH28_RS08030 b1ee0cac2f25f85426ac3e369e14500b 755 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 165 1.5E-17 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS08030 b1ee0cac2f25f85426ac3e369e14500b 755 Gene3D G3DSA:2.170.130.10 38 172 2.6E-25 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CHH28_RS08030 b1ee0cac2f25f85426ac3e369e14500b 755 Pfam PF00593 TonB dependent receptor 417 707 2.1E-18 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS08030 b1ee0cac2f25f85426ac3e369e14500b 755 SUPERFAMILY SSF56935 44 315 1.61E-72 T 29-03-2018 CHH28_RS08030 b1ee0cac2f25f85426ac3e369e14500b 755 SUPERFAMILY SSF56935 395 697 1.61E-72 T 29-03-2018 CHH28_RS08030 b1ee0cac2f25f85426ac3e369e14500b 755 Gene3D G3DSA:2.40.170.20 173 724 1.3E-35 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CHH28_RS11845 2924a06842b673737682e15fe7cdf0b4 100 Pfam PF13466 STAS domain 8 86 4.3E-15 T 29-03-2018 IPR002645 STAS domain CHH28_RS11845 2924a06842b673737682e15fe7cdf0b4 100 SUPERFAMILY SSF52091 4 89 1.37E-12 T 29-03-2018 IPR002645 STAS domain CHH28_RS11845 2924a06842b673737682e15fe7cdf0b4 100 Gene3D G3DSA:3.30.750.24 2 98 1.6E-10 T 29-03-2018 IPR002645 STAS domain CHH28_RS16075 560ec556743fb632c5fbe9f27cdc8bf3 194 SUPERFAMILY SSF58104 22 130 2.75E-5 T 29-03-2018 CHH28_RS16075 560ec556743fb632c5fbe9f27cdc8bf3 194 Gene3D G3DSA:1.10.287.950 7 128 6.4E-4 T 29-03-2018 CHH28_RS13815 b46dc63245c239db0d659327aba8f380 117 Pfam PF12697 Alpha/beta hydrolase family 42 116 3.0E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS13815 b46dc63245c239db0d659327aba8f380 117 SUPERFAMILY SSF53474 31 116 4.35E-19 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS13815 b46dc63245c239db0d659327aba8f380 117 Gene3D G3DSA:3.40.50.1820 23 117 2.6E-16 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS15570 440630365fc7ea0ecbea86d98794efb9 142 Pfam PF11911 Protein of unknown function (DUF3429) 12 139 1.8E-21 T 29-03-2018 IPR021836 Protein of unknown function DUF3429 CHH28_RS01930 f031dd79f6cf7444da0cff89fc41642c 199 Pfam PF07603 Protein of unknown function (DUF1566) 50 194 1.5E-14 T 29-03-2018 IPR011460 Protein of unknown function DUF1566 CHH28_RS11605 80a95c19252869650147ded5832ef610 156 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 28 146 7.2E-30 T 29-03-2018 IPR019223 Domain of unknown function DUF2147 CHH28_RS17415 c5b9fbc81565a64676703319f89a2b5d 79 Gene3D G3DSA:1.20.5.230 37 78 3.9E-10 T 29-03-2018 CHH28_RS17415 c5b9fbc81565a64676703319f89a2b5d 79 PIRSF PIRSF004117 4 79 1.8E-5 T 29-03-2018 IPR008020 Capsid protein G8P GO:0019028 CHH28_RS11720 86dfc71e08ab858650a72c715ab15ec8 750 Pfam PF02421 Ferrous iron transport protein B 6 163 2.3E-59 T 29-03-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 CHH28_RS11720 86dfc71e08ab858650a72c715ab15ec8 750 Pfam PF07670 Nucleoside recognition 503 680 1.7E-34 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CHH28_RS11720 86dfc71e08ab858650a72c715ab15ec8 750 Pfam PF07670 Nucleoside recognition 342 433 7.6E-12 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CHH28_RS11720 86dfc71e08ab858650a72c715ab15ec8 750 Gene3D G3DSA:3.40.50.300 2 279 1.8E-31 T 29-03-2018 CHH28_RS11720 86dfc71e08ab858650a72c715ab15ec8 750 Pfam PF07664 Ferrous iron transport protein B C terminus 445 497 1.9E-20 T 29-03-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CHH28_RS11720 86dfc71e08ab858650a72c715ab15ec8 750 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 677 1.3E-184 T 29-03-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CHH28_RS11720 86dfc71e08ab858650a72c715ab15ec8 750 SUPERFAMILY SSF52540 4 175 1.03E-38 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS15835 4f7c370b92b9d7d1041d4d8d14661c4a 131 SUPERFAMILY SSF46458 8 124 4.68E-30 T 29-03-2018 IPR009050 Globin-like CHH28_RS15835 4f7c370b92b9d7d1041d4d8d14661c4a 131 Gene3D G3DSA:1.10.490.10 6 131 3.1E-25 T 29-03-2018 CHH28_RS15835 4f7c370b92b9d7d1041d4d8d14661c4a 131 Pfam PF01152 Bacterial-like globin 10 106 7.9E-24 T 29-03-2018 IPR001486 Truncated hemoglobin GO:0019825 CHH28_RS17145 47f0f120797e8b1c8619f6d25028495d 164 Gene3D G3DSA:1.10.530.10 9 157 3.0E-5 T 29-03-2018 CHH28_RS01785 5cde50e331b8ffa4e31c3337520b8b7e 156 SUPERFAMILY SSF56935 19 135 1.14E-10 T 29-03-2018 CHH28_RS01785 5cde50e331b8ffa4e31c3337520b8b7e 156 Gene3D G3DSA:2.40.160.10 1 156 2.5E-16 T 29-03-2018 CHH28_RS05050 d8868ee683464ee112b97b2e1cfc3e04 137 Gene3D G3DSA:3.40.630.30 34 137 1.3E-18 T 29-03-2018 CHH28_RS05050 d8868ee683464ee112b97b2e1cfc3e04 137 SUPERFAMILY SSF55729 31 136 4.82E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS05050 d8868ee683464ee112b97b2e1cfc3e04 137 Pfam PF00583 Acetyltransferase (GNAT) family 34 115 2.7E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS19195 dc8504fb93b1d461e3e3fa446c1bb162 132 Pfam PF13586 Transposase DDE domain 44 130 2.6E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS19195 dc8504fb93b1d461e3e3fa446c1bb162 132 Gene3D G3DSA:3.90.350.10 1 118 2.9E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS09190 2b0e884e691411ddea4285dce755e17b 121 Pfam PF14086 Domain of unknown function (DUF4266) 71 121 8.7E-17 T 29-03-2018 IPR025362 Domain of unknown function DUF4266 CHH28_RS18490 b6e25dd8dfbc8270607ca52692ec4c92 70 Gene3D G3DSA:1.10.1220.10 3 69 1.8E-4 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CHH28_RS18490 b6e25dd8dfbc8270607ca52692ec4c92 70 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 59 5.4E-26 T 29-03-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system CHH28_RS14070 fcce737ce9715872e1d3ae4091ea1d92 386 Pfam PF00999 Sodium/hydrogen exchanger family 11 366 4.8E-44 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CHH28_RS14070 fcce737ce9715872e1d3ae4091ea1d92 386 Gene3D G3DSA:1.20.91.10 224 308 1.5E-5 T 29-03-2018 CHH28_RS14215 accf7c72150b2777ae47545a02bb844f 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 66 2.2E-15 T 29-03-2018 IPR007495 (Na+)-NQR maturation factor NqrM CHH28_RS11795 2a7afc74b1a4a06a7e35063fb09efbe9 151 SUPERFAMILY SSF47240 4 135 6.08E-8 T 29-03-2018 IPR009078 Ferritin-like superfamily CHH28_RS11795 2a7afc74b1a4a06a7e35063fb09efbe9 151 Gene3D G3DSA:1.20.1260.10 1 149 1.4E-8 T 29-03-2018 IPR012347 Ferritin-related CHH28_RS16005 fe924d7b62ed78d99841c49f5b551ee4 360 PIRSF PIRSF001361 7 360 2.9E-140 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CHH28_RS16005 fe924d7b62ed78d99841c49f5b551ee4 360 Gene3D G3DSA:3.20.20.70 23 359 1.4E-106 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CHH28_RS16005 fe924d7b62ed78d99841c49f5b551ee4 360 SUPERFAMILY SSF51569 23 357 2.41E-113 T 29-03-2018 CHH28_RS16005 fe924d7b62ed78d99841c49f5b551ee4 360 Pfam PF00793 DAHP synthetase I family 58 351 6.6E-82 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CHH28_RS16005 fe924d7b62ed78d99841c49f5b551ee4 360 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 21 356 1.5E-129 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CHH28_RS08675 432af1d439ad45bfc566f0e59a84dff2 105 Pfam PF13466 STAS domain 16 94 1.3E-16 T 29-03-2018 IPR002645 STAS domain CHH28_RS08675 432af1d439ad45bfc566f0e59a84dff2 105 SUPERFAMILY SSF52091 1 99 4.71E-14 T 29-03-2018 IPR002645 STAS domain CHH28_RS08675 432af1d439ad45bfc566f0e59a84dff2 105 Gene3D G3DSA:3.30.750.24 3 104 2.0E-9 T 29-03-2018 IPR002645 STAS domain CHH28_RS01445 9d4cb8f282d732d067e52b84037e973e 93 Pfam PF03968 OstA-like protein 5 86 3.4E-4 T 29-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal CHH28_RS01445 9d4cb8f282d732d067e52b84037e973e 93 Gene3D G3DSA:2.60.450.10 1 92 3.4E-5 T 29-03-2018 CHH28_RS17990 c072730cca032b62c0b7fafad057acd7 149 Gene3D G3DSA:1.20.1600.10 2 93 8.2E-4 T 29-03-2018 CHH28_RS04700 b3171ce1a574d71505850b16ebc48cfa 106 Pfam PF11872 Protein of unknown function (DUF3392) 2 102 1.5E-35 T 29-03-2018 IPR021813 Protein of unknown function DUF3392 CHH28_RS07885 299c29081a8b19ec57d21bd36ce955bd 1407 Pfam PF05860 haemagglutination activity domain 70 187 1.3E-29 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal CHH28_RS07885 299c29081a8b19ec57d21bd36ce955bd 1407 Gene3D G3DSA:2.160.20.10 700 831 4.7E-4 T 29-03-2018 IPR012334 Pectin lyase fold CHH28_RS07885 299c29081a8b19ec57d21bd36ce955bd 1407 Gene3D G3DSA:2.160.20.10 832 1007 0.0067 T 29-03-2018 IPR012334 Pectin lyase fold CHH28_RS07885 299c29081a8b19ec57d21bd36ce955bd 1407 Gene3D G3DSA:2.160.20.10 59 377 7.8E-43 T 29-03-2018 IPR012334 Pectin lyase fold CHH28_RS07885 299c29081a8b19ec57d21bd36ce955bd 1407 Gene3D G3DSA:2.160.20.10 1008 1150 1.3E-4 T 29-03-2018 IPR012334 Pectin lyase fold CHH28_RS07885 299c29081a8b19ec57d21bd36ce955bd 1407 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 89 184 1.0E-21 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal CHH28_RS07885 299c29081a8b19ec57d21bd36ce955bd 1407 SUPERFAMILY SSF51126 66 323 8.79E-39 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CHH28_RS07885 299c29081a8b19ec57d21bd36ce955bd 1407 SMART SM00912 71 191 4.4E-39 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal CHH28_RS09130 ecb41397873b556462de7565374bbd38 292 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 119 236 9.2E-21 T 29-03-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain CHH28_RS09130 ecb41397873b556462de7565374bbd38 292 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 11 262 1.6E-39 T 29-03-2018 IPR017592 Pilus assembly, Flp-type CpaB CHH28_RS09130 ecb41397873b556462de7565374bbd38 292 Gene3D G3DSA:3.90.1210.10 32 124 0.002 T 29-03-2018 CHH28_RS19525 b4e6dbeade74437408ebe7c74007903b 284 Gene3D G3DSA:3.40.50.150 10 273 9.1E-29 T 29-03-2018 CHH28_RS19525 b4e6dbeade74437408ebe7c74007903b 284 SUPERFAMILY SSF53335 58 269 3.32E-30 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CHH28_RS19525 b4e6dbeade74437408ebe7c74007903b 284 Pfam PF04072 Leucine carboxyl methyltransferase 64 188 8.0E-18 T 29-03-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 CHH28_RS11125 bcc255481513ea1d685ca5d9af7f3f42 142 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 126 1.6E-27 T 29-03-2018 IPR007359 Positive regulator of sigma(E), RseC/MucC CHH28_RS11125 bcc255481513ea1d685ca5d9af7f3f42 142 PIRSF PIRSF004923 1 142 9.8E-31 T 29-03-2018 IPR026268 Protein RseC CHH28_RS01180 b7f4bc0b959fc18fc88e1acaed71e4e9 604 Pfam PF05787 Bacterial protein of unknown function (DUF839) 150 527 2.3E-20 T 29-03-2018 IPR008557 Protein of unknown function DUF839 CHH28_RS18385 860aa47a9adb3776fb0d84e1e694b4f4 321 Pfam PF12697 Alpha/beta hydrolase family 63 298 3.8E-11 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS18385 860aa47a9adb3776fb0d84e1e694b4f4 321 SUPERFAMILY SSF53474 27 297 8.59E-40 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS18385 860aa47a9adb3776fb0d84e1e694b4f4 321 Gene3D G3DSA:3.40.50.1820 34 316 1.0E-28 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS18385 860aa47a9adb3776fb0d84e1e694b4f4 321 PIRSF PIRSF005211 1 320 4.0E-85 T 29-03-2018 IPR012020 AB hydrolase 4 family CHH28_RS17350 b65af55d2ba382029afcc350d3319086 94 Pfam PF15538 Bacterial toxin 46 22 91 3.2E-14 T 29-03-2018 IPR028238 Bacterial toxin 46 CHH28_RS06430 c867197cf50dd15dfc3408bc1aa87a9d 242 Pfam PF00583 Acetyltransferase (GNAT) family 135 230 9.9E-8 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS06430 c867197cf50dd15dfc3408bc1aa87a9d 242 SUPERFAMILY SSF55729 117 236 1.56E-15 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS06430 c867197cf50dd15dfc3408bc1aa87a9d 242 Gene3D G3DSA:3.40.630.30 51 239 4.9E-14 T 29-03-2018 CHH28_RS11780 bdd667ea7cb6998def925bd4e457de9d 449 Gene3D G3DSA:2.50.20.10 154 445 8.4E-50 T 29-03-2018 CHH28_RS11780 bdd667ea7cb6998def925bd4e457de9d 449 Pfam PF07044 Protein of unknown function (DUF1329) 81 444 1.1E-133 T 29-03-2018 IPR010752 Protein of unknown function DUF1329 CHH28_RS01375 70c3e211c97cac6059b6711a175c8491 501 Pfam PF04293 SpoVR like protein 10 441 4.6E-179 T 29-03-2018 IPR007390 Sporulation stage V, protein R CHH28_RS16375 265d0767f05ead7a563c9277b4c90cab 486 Pfam PF01235 Sodium:alanine symporter family 53 452 2.1E-148 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS16375 265d0767f05ead7a563c9277b4c90cab 486 TIGRFAM TIGR00835 agcS: amino acid carrier protein 10 439 8.3E-143 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS16375 265d0767f05ead7a563c9277b4c90cab 486 PRINTS PR00175 Sodium/alanine symporter signature 408 428 8.8E-55 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS16375 265d0767f05ead7a563c9277b4c90cab 486 PRINTS PR00175 Sodium/alanine symporter signature 299 317 8.8E-55 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS16375 265d0767f05ead7a563c9277b4c90cab 486 PRINTS PR00175 Sodium/alanine symporter signature 180 198 8.8E-55 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS16375 265d0767f05ead7a563c9277b4c90cab 486 PRINTS PR00175 Sodium/alanine symporter signature 347 369 8.8E-55 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS16375 265d0767f05ead7a563c9277b4c90cab 486 PRINTS PR00175 Sodium/alanine symporter signature 208 227 8.8E-55 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS16375 265d0767f05ead7a563c9277b4c90cab 486 PRINTS PR00175 Sodium/alanine symporter signature 87 109 8.8E-55 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CHH28_RS06610 241b7a5833d93f81e0cdbd6f712eed82 191 Pfam PF02169 LPP20 lipoprotein 41 148 1.3E-9 T 29-03-2018 IPR024952 Lipoprotein LPP20-like CHH28_RS18310 ce92575c53e0cbdb2f0ad769e89ec372 318 Pfam PF00149 Calcineurin-like phosphoesterase 7 136 1.2E-7 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CHH28_RS18310 ce92575c53e0cbdb2f0ad769e89ec372 318 SUPERFAMILY SSF56300 7 161 6.91E-28 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS18310 ce92575c53e0cbdb2f0ad769e89ec372 318 SUPERFAMILY SSF56300 211 286 6.91E-28 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS18310 ce92575c53e0cbdb2f0ad769e89ec372 318 Gene3D G3DSA:3.60.21.10 4 317 8.8E-28 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CHH28_RS07675 361e3c624871aa29226d319dd2d617f5 238 SUPERFAMILY SSF52266 29 237 1.13E-12 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain CHH28_RS07675 361e3c624871aa29226d319dd2d617f5 238 Gene3D G3DSA:3.40.50.1110 22 238 3.6E-15 T 29-03-2018 CHH28_RS10240 e5596f8f66b7463ace59d1fbc23820ca 329 Gene3D G3DSA:3.40.190.10 140 214 7.6E-6 T 29-03-2018 CHH28_RS10240 e5596f8f66b7463ace59d1fbc23820ca 329 SUPERFAMILY SSF53850 119 203 3.62E-6 T 29-03-2018 CHH28_RS10240 e5596f8f66b7463ace59d1fbc23820ca 329 Gene3D G3DSA:3.40.190.10 12 104 0.085 T 29-03-2018 CHH28_RS12995 e356c3ad4caaac6b94123e0db93b0726 729 SUPERFAMILY SSF53474 231 315 2.04E-5 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS12995 e356c3ad4caaac6b94123e0db93b0726 729 Gene3D G3DSA:3.40.50.1820 201 612 1.8E-4 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS03355 2a0edc8f515110661fd22e65b09a92f6 314 Gene3D G3DSA:3.40.50.1820 59 313 3.2E-30 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS03355 2a0edc8f515110661fd22e65b09a92f6 314 Pfam PF12146 Serine aminopeptidase, S33 66 296 1.7E-26 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CHH28_RS03355 2a0edc8f515110661fd22e65b09a92f6 314 SUPERFAMILY SSF53474 53 312 6.72E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS03140 9fbe7c71d9ff012b7b620366711362c8 294 Pfam PF01758 Sodium Bile acid symporter family 11 188 5.7E-27 T 29-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CHH28_RS04855 a42cfccd614a351aeea87b51823e15e8 440 Gene3D G3DSA:3.40.710.10 113 438 8.6E-47 T 29-03-2018 CHH28_RS04855 a42cfccd614a351aeea87b51823e15e8 440 SUPERFAMILY SSF56601 59 434 5.07E-88 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CHH28_RS04855 a42cfccd614a351aeea87b51823e15e8 440 Pfam PF00144 Beta-lactamase 126 420 4.3E-29 T 29-03-2018 IPR001466 Beta-lactamase-related CHH28_RS18860 6f3a43bb432d1e85c33bc9c21ecd6b90 151 Gene3D G3DSA:1.20.120.340 1 126 1.3E-38 T 29-03-2018 CHH28_RS18860 6f3a43bb432d1e85c33bc9c21ecd6b90 151 Pfam PF02561 Flagellar protein FliS 8 122 1.3E-34 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CHH28_RS18860 6f3a43bb432d1e85c33bc9c21ecd6b90 151 SUPERFAMILY SSF101116 8 125 6.41E-35 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CHH28_RS18860 6f3a43bb432d1e85c33bc9c21ecd6b90 151 PIRSF PIRSF039090 1 130 4.6E-41 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CHH28_RS18860 6f3a43bb432d1e85c33bc9c21ecd6b90 151 TIGRFAM TIGR00208 fliS: flagellar protein FliS 2 122 1.9E-25 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CHH28_RS16980 90b1adfea8c3f6a2eaaf9e84ff291946 250 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 4 250 30.949 T 29-03-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112 CHH28_RS16980 90b1adfea8c3f6a2eaaf9e84ff291946 250 SUPERFAMILY SSF53167 6 247 5.76E-76 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CHH28_RS16980 90b1adfea8c3f6a2eaaf9e84ff291946 250 Pfam PF01048 Phosphorylase superfamily 7 245 1.6E-42 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CHH28_RS16980 90b1adfea8c3f6a2eaaf9e84ff291946 250 Gene3D G3DSA:3.40.50.1580 2 249 4.2E-41 T 29-03-2018 CHH28_RS16980 90b1adfea8c3f6a2eaaf9e84ff291946 250 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 52 92 - T 29-03-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 CHH28_RS11650 427010c6415df2339bbb9d5edf1a3fc9 166 Pfam PF11286 Protein of unknown function (DUF3087) 1 163 1.4E-41 T 29-03-2018 IPR021438 Protein of unknown function DUF3087 CHH28_RS08910 4bafd0d0ac263eb3511e147ecd32a13d 423 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 419 6.3E-108 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 CHH28_RS08910 4bafd0d0ac263eb3511e147ecd32a13d 423 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 417 2.4E-97 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CHH28_RS08910 4bafd0d0ac263eb3511e147ecd32a13d 423 PIRSF PIRSF006066 1 422 4.6E-116 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 CHH28_RS04495 a9b9fabd23a2a88543af5cb20dc61765 206 Pfam PF07681 DoxX 26 111 2.5E-22 T 29-03-2018 IPR032808 DoxX family CHH28_RS15465 6e9c64bd430ed28389ad5887c04978ea 179 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 22 163 1.5E-43 T 29-03-2018 IPR018639 Domain of unknown function DUF2062 CHH28_RS02520 dc25934180702e293e68b8c16772e25b 409 SMART SM01204 244 390 1.4E-24 T 29-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CHH28_RS02520 dc25934180702e293e68b8c16772e25b 409 SMART SM00897 48 243 7.5E-18 T 29-03-2018 IPR013702 FIST domain, N-terminal CHH28_RS02520 dc25934180702e293e68b8c16772e25b 409 Pfam PF10442 FIST C domain 266 388 2.9E-15 T 29-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CHH28_RS02520 dc25934180702e293e68b8c16772e25b 409 Pfam PF08495 FIST N domain 53 242 5.1E-20 T 29-03-2018 IPR013702 FIST domain, N-terminal CHH28_RS17505 2418d51708111dcc3ab24cb169fa0655 393 Pfam PF00155 Aminotransferase class I and II 33 388 4.2E-76 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CHH28_RS17505 2418d51708111dcc3ab24cb169fa0655 393 SUPERFAMILY SSF53383 4 392 1.04E-113 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CHH28_RS17505 2418d51708111dcc3ab24cb169fa0655 393 Gene3D G3DSA:3.90.1150.10 1 255 1.3E-42 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS17505 2418d51708111dcc3ab24cb169fa0655 393 Gene3D G3DSA:3.90.1150.10 256 393 5.5E-39 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CHH28_RS17505 2418d51708111dcc3ab24cb169fa0655 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CHH28_RS07510 01488ba136222584e169a815465baaef 300 Gene3D G3DSA:3.20.20.370 1 300 9.2E-63 T 29-03-2018 CHH28_RS07510 01488ba136222584e169a815465baaef 300 SUPERFAMILY SSF88713 3 299 1.0E-92 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CHH28_RS07510 01488ba136222584e169a815465baaef 300 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 3 299 4.4E-166 T 29-03-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 CHH28_RS07510 01488ba136222584e169a815465baaef 300 Pfam PF01522 Polysaccharide deacetylase 74 165 2.5E-9 T 29-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CHH28_RS19340 b81684299617d494646c2f6670c5038b 247 Pfam PF00005 ABC transporter 19 164 4.5E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS19340 b81684299617d494646c2f6670c5038b 247 SUPERFAMILY SSF52540 3 228 2.03E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS19340 b81684299617d494646c2f6670c5038b 247 Gene3D G3DSA:3.40.50.300 1 239 3.7E-53 T 29-03-2018 CHH28_RS19340 b81684299617d494646c2f6670c5038b 247 SMART SM00382 27 239 2.6E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS19340 b81684299617d494646c2f6670c5038b 247 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS00030 b6f2b9de9ea7e787b464258fb23e87ad 124 Pfam PF04247 Invasion gene expression up-regulator, SirB 3 116 9.2E-32 T 29-03-2018 IPR007360 Invasion gene expression up-regulator, SirB CHH28_RS00030 b6f2b9de9ea7e787b464258fb23e87ad 124 PIRSF PIRSF005610 1 115 4.0E-17 T 29-03-2018 IPR007360 Invasion gene expression up-regulator, SirB CHH28_RS19735 b6f2b9de9ea7e787b464258fb23e87ad 124 Pfam PF04247 Invasion gene expression up-regulator, SirB 3 116 9.2E-32 T 29-03-2018 IPR007360 Invasion gene expression up-regulator, SirB CHH28_RS19735 b6f2b9de9ea7e787b464258fb23e87ad 124 PIRSF PIRSF005610 1 115 4.0E-17 T 29-03-2018 IPR007360 Invasion gene expression up-regulator, SirB CHH28_RS10525 705096194e7e339dcb04323e514b1350 397 Pfam PF12704 MacB-like periplasmic core domain 18 205 3.7E-14 T 29-03-2018 IPR025857 MacB-like periplasmic core domain CHH28_RS10525 705096194e7e339dcb04323e514b1350 397 Pfam PF02687 FtsX-like permease family 303 395 1.6E-9 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CHH28_RS06965 6d35b697c6b6cc8fb608178a20b2268a 145 Gene3D G3DSA:1.10.287.900 2 39 1.1E-16 T 29-03-2018 IPR027455 Spermine/spermidine acetyltransferase, N-terminal domain KEGG: 00330+2.3.1.57|MetaCyc: PWY-0|MetaCyc: PWY-6117 CHH28_RS06965 6d35b697c6b6cc8fb608178a20b2268a 145 Gene3D G3DSA:3.40.630.30 47 143 8.4E-17 T 29-03-2018 CHH28_RS06965 6d35b697c6b6cc8fb608178a20b2268a 145 Pfam PF00583 Acetyltransferase (GNAT) family 42 127 6.7E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS06965 6d35b697c6b6cc8fb608178a20b2268a 145 SUPERFAMILY SSF55729 1 137 5.15E-27 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS16520 c54c6a4d9572bf15e9ac19a3d67aa018 430 PIRSF PIRSF005353 1 430 1.0E-174 T 29-03-2018 IPR026033 Purine permease PbuG-like CHH28_RS16520 c54c6a4d9572bf15e9ac19a3d67aa018 430 Pfam PF00860 Permease family 17 389 5.7E-52 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CHH28_RS17955 4ed0f0adc050272b3259705990ea465c 299 SUPERFAMILY SSF103481 189 294 3.53E-9 T 29-03-2018 CHH28_RS17955 4ed0f0adc050272b3259705990ea465c 299 Pfam PF00892 EamA-like transporter family 13 137 2.5E-10 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS17955 4ed0f0adc050272b3259705990ea465c 299 Pfam PF00892 EamA-like transporter family 153 289 2.4E-9 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS17955 4ed0f0adc050272b3259705990ea465c 299 SUPERFAMILY SSF103481 46 140 3.4E-7 T 29-03-2018 CHH28_RS14055 2125bfe7bd8b54b7d4398311ee4b02b1 104 Pfam PF02036 SCP-2 sterol transfer family 8 102 2.3E-21 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CHH28_RS14055 2125bfe7bd8b54b7d4398311ee4b02b1 104 SUPERFAMILY SSF55718 3 102 1.91E-29 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CHH28_RS14055 2125bfe7bd8b54b7d4398311ee4b02b1 104 Gene3D G3DSA:3.30.1050.10 2 104 1.5E-33 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CHH28_RS02020 07918332ea2b1fc69cc0f094a0ccf426 163 Gene3D G3DSA:2.40.160.20 1 163 1.9E-4 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS02020 07918332ea2b1fc69cc0f094a0ccf426 163 SUPERFAMILY SSF56925 7 163 4.19E-7 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS18660 3b0ff07605151e43b58b01f52b06558c 259 Pfam PF13614 AAA domain 2 180 2.3E-45 T 29-03-2018 IPR025669 AAA domain CHH28_RS18660 3b0ff07605151e43b58b01f52b06558c 259 SUPERFAMILY SSF52540 2 256 5.74E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS18660 3b0ff07605151e43b58b01f52b06558c 259 Gene3D G3DSA:3.40.50.300 1 259 6.9E-51 T 29-03-2018 CHH28_RS03935 38724f1f5b39ff311e97219d94033323 311 PIRSF PIRSF028235 1 311 7.8E-147 T 29-03-2018 IPR016877 Uncharacterised conserved protein UCP028235 CHH28_RS03935 38724f1f5b39ff311e97219d94033323 311 SUPERFAMILY SSF64182 7 307 1.59E-7 T 29-03-2018 CHH28_RS06155 df43da826a10e9392c28ed63958661a2 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 423 1.1E-104 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 CHH28_RS06155 df43da826a10e9392c28ed63958661a2 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 419 4.7E-79 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CHH28_RS06155 df43da826a10e9392c28ed63958661a2 425 PIRSF PIRSF006066 1 425 2.4E-102 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 CHH28_RS02135 6a5f6dffbcf4891ad47e4df87ef4e2ea 374 PIRSF PIRSF005211 4 373 1.1E-62 T 29-03-2018 IPR012020 AB hydrolase 4 family CHH28_RS02135 6a5f6dffbcf4891ad47e4df87ef4e2ea 374 Gene3D G3DSA:3.40.50.1820 68 360 8.2E-32 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS02135 6a5f6dffbcf4891ad47e4df87ef4e2ea 374 Pfam PF12146 Serine aminopeptidase, S33 105 344 9.4E-16 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CHH28_RS02135 6a5f6dffbcf4891ad47e4df87ef4e2ea 374 SUPERFAMILY SSF53474 90 353 8.11E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS02675 a5fdae391302fdba2994ae558d3c761c 585 Pfam PF10462 Peptidase M66 77 382 1.2E-80 T 29-03-2018 IPR019503 Peptidase M66 domain GO:0004222 CHH28_RS17570 d694e7629dc06e068151c6c9a82db2dc 145 Pfam PF13279 Thioesterase-like superfamily 17 139 6.2E-9 T 29-03-2018 CHH28_RS17570 d694e7629dc06e068151c6c9a82db2dc 145 Gene3D G3DSA:3.10.129.10 6 142 9.1E-30 T 29-03-2018 CHH28_RS17570 d694e7629dc06e068151c6c9a82db2dc 145 SUPERFAMILY SSF54637 7 141 1.32E-36 T 29-03-2018 IPR029069 HotDog domain CHH28_RS17385 5fc0ec7b9c9294e1144e092b8b304f9b 354 Gene3D G3DSA:1.20.58.70 95 318 0.063 T 29-03-2018 CHH28_RS02935 f12a0a26a65007e6f5b91a2dbac39f82 299 Pfam PF01925 Sulfite exporter TauE/SafE 45 292 3.8E-38 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CHH28_RS12070 e9c7f721f3c4f184c48343351c69b22d 159 Gene3D G3DSA:3.10.50.40 19 159 6.1E-39 T 29-03-2018 CHH28_RS12070 e9c7f721f3c4f184c48343351c69b22d 159 SUPERFAMILY SSF54534 11 158 3.34E-38 T 29-03-2018 CHH28_RS12070 e9c7f721f3c4f184c48343351c69b22d 159 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 71 156 4.6E-22 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CHH28_RS19410 51321c0b4298f996632d00dbde8ac51c 209 Pfam PF01810 LysE type translocator 12 205 2.2E-30 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS19410 51321c0b4298f996632d00dbde8ac51c 209 PIRSF PIRSF006324 1 208 2.3E-45 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS09600 778ee622cb8c955a452c071052ef3e39 159 SUPERFAMILY SSF54523 8 96 1.41E-11 T 29-03-2018 CHH28_RS09600 778ee622cb8c955a452c071052ef3e39 159 Gene3D G3DSA:3.30.700.10 8 141 6.2E-7 T 29-03-2018 CHH28_RS09600 778ee622cb8c955a452c071052ef3e39 159 Pfam PF12019 Type II transport protein GspH 44 146 4.7E-12 T 29-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 CHH28_RS12900 7249c9acc89c9a9072da602da5dc1792 249 Pfam PF06629 MltA-interacting protein MipA 31 248 4.2E-33 T 29-03-2018 IPR010583 MltA-interacting MipA CHH28_RS12780 e0415372fb4d3168735459c51ed66bf0 360 Gene3D G3DSA:3.40.50.720 1 62 2.0E-7 T 29-03-2018 CHH28_RS12780 e0415372fb4d3168735459c51ed66bf0 360 Gene3D G3DSA:3.30.9.10 63 301 7.5E-25 T 29-03-2018 CHH28_RS12780 e0415372fb4d3168735459c51ed66bf0 360 SUPERFAMILY SSF51905 2 286 5.44E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS12780 e0415372fb4d3168735459c51ed66bf0 360 Pfam PF01266 FAD dependent oxidoreductase 3 336 3.4E-33 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CHH28_RS02775 2b2fa7a2722999d0539fe35d26a7e017 262 Gene3D G3DSA:1.10.575.10 29 262 8.4E-49 T 29-03-2018 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 CHH28_RS02775 2b2fa7a2722999d0539fe35d26a7e017 262 SUPERFAMILY SSF48537 29 256 1.05E-45 T 29-03-2018 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 CHH28_RS02775 2b2fa7a2722999d0539fe35d26a7e017 262 Pfam PF02265 S1/P1 Nuclease 31 257 4.2E-47 T 29-03-2018 IPR003154 S1/P1 nuclease GO:0003676|GO:0004519|GO:0006308 CHH28_RS05540 d86658285a8821116fb2223a4f6ac65d 379 SUPERFAMILY SSF53756 220 355 1.49E-8 T 29-03-2018 CHH28_RS05540 d86658285a8821116fb2223a4f6ac65d 379 Gene3D G3DSA:3.40.50.2000 189 331 3.9E-8 T 29-03-2018 CHH28_RS05540 d86658285a8821116fb2223a4f6ac65d 379 Pfam PF05159 Capsule polysaccharide biosynthesis protein 192 356 7.7E-25 T 29-03-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 CHH28_RS04750 caeca1503582f7723a8f010d71efc789 385 SUPERFAMILY SSF51905 1 165 1.03E-37 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS04750 caeca1503582f7723a8f010d71efc789 385 SUPERFAMILY SSF51905 195 324 1.03E-37 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS04750 caeca1503582f7723a8f010d71efc789 385 Gene3D G3DSA:3.40.50.720 130 307 5.3E-29 T 29-03-2018 CHH28_RS04750 caeca1503582f7723a8f010d71efc789 385 Gene3D G3DSA:3.50.50.60 2 129 2.4E-12 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS04750 caeca1503582f7723a8f010d71efc789 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.0E-18 T 29-03-2018 CHH28_RS04750 caeca1503582f7723a8f010d71efc789 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 4.0E-18 T 29-03-2018 CHH28_RS04750 caeca1503582f7723a8f010d71efc789 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 4.0E-18 T 29-03-2018 CHH28_RS04750 caeca1503582f7723a8f010d71efc789 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 4.0E-18 T 29-03-2018 CHH28_RS04750 caeca1503582f7723a8f010d71efc789 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 4.0E-18 T 29-03-2018 CHH28_RS04750 caeca1503582f7723a8f010d71efc789 385 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 234 248 4.2E-14 T 29-03-2018 CHH28_RS04750 caeca1503582f7723a8f010d71efc789 385 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.2E-14 T 29-03-2018 CHH28_RS04750 caeca1503582f7723a8f010d71efc789 385 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 360 375 4.2E-14 T 29-03-2018 CHH28_RS04750 caeca1503582f7723a8f010d71efc789 385 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 4.2E-14 T 29-03-2018 CHH28_RS04750 caeca1503582f7723a8f010d71efc789 385 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 173 4.2E-14 T 29-03-2018 CHH28_RS04750 caeca1503582f7723a8f010d71efc789 385 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 280 6.5E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CHH28_RS01860 ae2124a17efb2316a7ef3d8c959d8381 259 Gene3D G3DSA:3.40.390.10 55 256 1.2E-5 T 29-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CHH28_RS09970 d4984208ec0476389977b321c9ed8e82 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 8.3E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS04845 36959058f41acb5c93b93e5cc00849e4 191 Pfam PF04264 YceI-like domain 25 187 5.0E-38 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CHH28_RS04845 36959058f41acb5c93b93e5cc00849e4 191 SMART SM00867 24 189 2.2E-69 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CHH28_RS04845 36959058f41acb5c93b93e5cc00849e4 191 SUPERFAMILY SSF101874 22 191 3.92E-53 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CHH28_RS04845 36959058f41acb5c93b93e5cc00849e4 191 Gene3D G3DSA:2.40.128.110 17 189 7.5E-48 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CHH28_RS10735 c45d0997176850c5f7c762b5980b1c36 103 SUPERFAMILY SSF51182 36 100 6.21E-11 T 29-03-2018 IPR011051 RmlC-like cupin domain CHH28_RS10735 c45d0997176850c5f7c762b5980b1c36 103 Gene3D G3DSA:2.60.120.10 6 97 6.7E-10 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS14580 25766a4de3c59980d413dc1e55c69037 117 SUPERFAMILY SSF160719 17 98 2.35E-6 T 29-03-2018 CHH28_RS14580 25766a4de3c59980d413dc1e55c69037 117 Gene3D G3DSA:3.10.450.40 8 115 1.0E-8 T 29-03-2018 CHH28_RS14580 25766a4de3c59980d413dc1e55c69037 117 Pfam PF04965 Gene 25-like lysozyme 18 91 5.0E-7 T 29-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD CHH28_RS07610 604eb90b28691dad68dd166036e0f772 237 Pfam PF15575 Immunity protein 49 5 206 1.2E-18 T 29-03-2018 IPR029074 Immunity protein 49 CHH28_RS16530 98b3b5cdf2b9024963c00226f7e940e9 345 Pfam PF04245 37-kD nucleoid-associated bacterial protein 7 338 1.3E-46 T 29-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CHH28_RS17375 cbc27733ca5c768aac767cb8e56ea998 108 Pfam PF11259 Protein of unknown function (DUF3060) 62 107 2.0E-5 T 29-03-2018 IPR021417 Protein of unknown function DUF3060 CHH28_RS17375 cbc27733ca5c768aac767cb8e56ea998 108 Gene3D G3DSA:3.40.190.10 5 89 6.3E-4 T 29-03-2018 CHH28_RS08315 7df7b8893585a86749899a005d00cab0 376 Pfam PF13280 WYL domain 196 369 9.9E-33 T 29-03-2018 IPR026881 WYL domain CHH28_RS08315 7df7b8893585a86749899a005d00cab0 376 Gene3D G3DSA:1.10.10.10 18 117 7.4E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS05815 fc9d45988b5a93b67430050bcf0ab0a7 148 Pfam PF04519 Polymer-forming cytoskeletal 15 115 7.3E-26 T 29-03-2018 IPR007607 Protein of unknown function DUF583 CHH28_RS16105 1763cb8231b6878d25676d9a6c283c15 248 Pfam PF01925 Sulfite exporter TauE/SafE 14 236 7.2E-17 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CHH28_RS10425 968f2cda4d8c313a7bf8dc5f3eba3c5e 388 Gene3D G3DSA:2.60.40.10 40 256 7.3E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS12960 539456a1175ed370c0daea5d11a008b2 217 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 31 209 2.3E-23 T 29-03-2018 IPR018728 Domain of unknown function DUF2268 CHH28_RS05500 e3121436904cefffb8594f4f6abcf68c 127 SMART SM00448 8 121 3.3E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS05500 e3121436904cefffb8594f4f6abcf68c 127 Gene3D G3DSA:3.40.50.2300 1 127 4.1E-36 T 29-03-2018 CHH28_RS05500 e3121436904cefffb8594f4f6abcf68c 127 Pfam PF00072 Response regulator receiver domain 10 121 4.0E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CHH28_RS05500 e3121436904cefffb8594f4f6abcf68c 127 SUPERFAMILY SSF52172 6 126 2.28E-37 T 29-03-2018 IPR011006 CheY-like superfamily CHH28_RS18275 a26e854361461d390da46acf0eec48fa 827 Gene3D G3DSA:1.20.1640.10 580 820 4.9E-35 T 29-03-2018 CHH28_RS18275 a26e854361461d390da46acf0eec48fa 827 Gene3D G3DSA:1.20.1640.10 200 411 7.2E-28 T 29-03-2018 CHH28_RS18275 a26e854361461d390da46acf0eec48fa 827 SUPERFAMILY SSF82866 204 398 1.96E-30 T 29-03-2018 CHH28_RS18275 a26e854361461d390da46acf0eec48fa 827 SUPERFAMILY SSF82866 625 809 1.1E-33 T 29-03-2018 CHH28_RS18275 a26e854361461d390da46acf0eec48fa 827 Pfam PF03176 MMPL family 637 810 1.2E-16 T 29-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CHH28_RS18275 a26e854361461d390da46acf0eec48fa 827 Pfam PF03176 MMPL family 192 428 3.9E-14 T 29-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CHH28_RS02470 cb907e1fa71aeb3cc7e5bc43e9d64274 205 Pfam PF02036 SCP-2 sterol transfer family 16 112 4.9E-8 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CHH28_RS08240 268a64ad0eb8d9bc0820cf9d26625cc1 298 Pfam PF07103 Protein of unknown function (DUF1365) 15 275 5.7E-68 T 29-03-2018 IPR010775 Protein of unknown function DUF1365 CHH28_RS19275 931c4d4cbca512273aaff3e503b3919c 257 SUPERFAMILY SSF88713 21 235 8.15E-66 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CHH28_RS19275 931c4d4cbca512273aaff3e503b3919c 257 Pfam PF04748 Divergent polysaccharide deacetylase 24 234 1.3E-73 T 29-03-2018 IPR006837 Divergent polysaccharide deacetylase CHH28_RS19275 931c4d4cbca512273aaff3e503b3919c 257 Gene3D G3DSA:3.20.20.370 13 238 2.3E-76 T 29-03-2018 CHH28_RS19650 117a8dbd1c452957b132eeed612a478f 151 Pfam PF00258 Flavodoxin 9 132 2.1E-20 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CHH28_RS19650 117a8dbd1c452957b132eeed612a478f 151 Gene3D G3DSA:3.40.50.360 1 151 1.9E-27 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS19650 117a8dbd1c452957b132eeed612a478f 151 SUPERFAMILY SSF52218 1 148 1.68E-36 T 29-03-2018 IPR029039 Flavoprotein-like domain CHH28_RS19110 ed7d1c51806832cc5e21d1c2856f086c 435 Pfam PF07394 Protein of unknown function (DUF1501) 46 388 7.0E-17 T 29-03-2018 IPR010869 Protein of unknown function DUF1501 CHH28_RS19110 ed7d1c51806832cc5e21d1c2856f086c 435 Gene3D G3DSA:3.40.720.10 20 378 1.7E-4 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CHH28_RS10065 768379b7b488f9588bccb94bac9b4657 261 Gene3D G3DSA:3.40.190.10 9 223 4.5E-5 T 29-03-2018 CHH28_RS10065 768379b7b488f9588bccb94bac9b4657 261 SUPERFAMILY SSF53850 17 220 3.04E-14 T 29-03-2018 CHH28_RS17190 ce2a2067d3d7cf18ed9e0f4c26157fba 114 SUPERFAMILY SSF54909 3 79 5.13E-6 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CHH28_RS17190 ce2a2067d3d7cf18ed9e0f4c26157fba 114 Gene3D G3DSA:3.30.70.100 3 99 2.2E-4 T 29-03-2018 CHH28_RS07845 3e4b56bc0e0bddc322b0c500671911cc 203 Pfam PF04664 Opioid growth factor receptor (OGFr) conserved region 57 169 9.2E-18 T 29-03-2018 IPR006757 Opioid growth factor receptor (OGFr) conserved domain GO:0004872|GO:0016020 CHH28_RS12805 b28d9328f9592b8a1480f38ac7b7bbec 190 Gene3D G3DSA:2.40.160.20 24 190 4.2E-6 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS12805 b28d9328f9592b8a1480f38ac7b7bbec 190 Pfam PF07437 YfaZ precursor 17 190 2.6E-15 T 29-03-2018 IPR009998 YfaZ CHH28_RS12805 b28d9328f9592b8a1480f38ac7b7bbec 190 SUPERFAMILY SSF103515 29 167 4.71E-5 T 29-03-2018 IPR005546 Autotransporter beta-domain CHH28_RS00385 2ca2c6aaccc36f32a09028fa9cb7b8de 200 PIRSF PIRSF000239 1 199 9.1E-56 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CHH28_RS00385 2ca2c6aaccc36f32a09028fa9cb7b8de 200 SUPERFAMILY SSF52833 3 195 4.84E-63 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS00385 2ca2c6aaccc36f32a09028fa9cb7b8de 200 Gene3D G3DSA:3.40.30.10 4 161 1.5E-38 T 29-03-2018 CHH28_RS00385 2ca2c6aaccc36f32a09028fa9cb7b8de 200 Gene3D G3DSA:3.30.1020.10 162 199 2.8E-15 T 29-03-2018 CHH28_RS00385 2ca2c6aaccc36f32a09028fa9cb7b8de 200 Pfam PF00578 AhpC/TSA family 5 139 1.6E-30 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CHH28_RS00385 2ca2c6aaccc36f32a09028fa9cb7b8de 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 8.4E-13 T 29-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CHH28_RS10270 ea35c8c0f9654c568f40613e338d6d2d 162 SUPERFAMILY SSF117782 56 145 5.75E-24 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 CHH28_RS10270 ea35c8c0f9654c568f40613e338d6d2d 162 Gene3D G3DSA:3.30.110.70 38 145 1.9E-26 T 29-03-2018 IPR035439 Uncharacterised protein family UPF0145/C2CD5 Reactome: R-HSA-1445148 CHH28_RS10270 ea35c8c0f9654c568f40613e338d6d2d 162 Pfam PF01906 Putative heavy-metal-binding 55 144 5.4E-24 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 CHH28_RS18075 5eccfc3f5d87b7d274ddba3867ac9cf3 129 SUPERFAMILY SSF47188 6 121 5.76E-16 T 29-03-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CHH28_RS18075 5eccfc3f5d87b7d274ddba3867ac9cf3 129 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 9 121 5.0E-16 T 29-03-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CHH28_RS18075 5eccfc3f5d87b7d274ddba3867ac9cf3 129 Gene3D G3DSA:1.20.120.50 1 127 1.0E-16 T 29-03-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CHH28_RS00880 53ddb68420a3c4a29f1c6ba6024cee37 244 Gene3D G3DSA:3.90.226.10 2 237 2.8E-36 T 29-03-2018 CHH28_RS00880 53ddb68420a3c4a29f1c6ba6024cee37 244 SUPERFAMILY SSF52096 2 225 1.13E-41 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS00880 53ddb68420a3c4a29f1c6ba6024cee37 244 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 209 4.7E-24 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CHH28_RS09905 840268c28b8a1370c678c73d1fa5012b 565 SMART SM00990 448 564 3.7E-24 T 29-03-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 CHH28_RS09905 840268c28b8a1370c678c73d1fa5012b 565 Pfam PF08774 VRR-NUC domain 456 563 1.1E-23 T 29-03-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 CHH28_RS01255 65cd41cd9547f67901c08c2f30489dec 254 Gene3D G3DSA:1.20.5.50 113 254 5.3E-8 T 29-03-2018 CHH28_RS12260 bad454e1e320ee777d529176062e336c 378 SUPERFAMILY SSF56935 76 378 5.33E-32 T 29-03-2018 CHH28_RS12260 bad454e1e320ee777d529176062e336c 378 SUPERFAMILY SSF56935 19 45 5.33E-32 T 29-03-2018 CHH28_RS12260 bad454e1e320ee777d529176062e336c 378 Gene3D G3DSA:2.40.160.10 16 378 9.6E-22 T 29-03-2018 CHH28_RS18460 95700b4196bd4a5802e0f8832b3f73d8 111 Pfam PF11743 Protein of unknown function (DUF3301) 9 108 2.5E-23 T 29-03-2018 IPR021732 Protein of unknown function DUF3301 CHH28_RS14225 b39f2cdb1cd6cc03bff6ba7c56747680 278 Gene3D G3DSA:3.50.14.10 6 204 2.9E-33 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CHH28_RS00930 a797cde42c4a4684d930260f637e9f34 162 Gene3D G3DSA:3.40.630.30 10 160 3.9E-35 T 29-03-2018 CHH28_RS00930 a797cde42c4a4684d930260f637e9f34 162 Pfam PF00583 Acetyltransferase (GNAT) family 23 129 1.3E-18 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS00930 a797cde42c4a4684d930260f637e9f34 162 SUPERFAMILY SSF55729 11 155 1.23E-33 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS00930 a797cde42c4a4684d930260f637e9f34 162 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 21 150 4.4E-36 T 29-03-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 CHH28_RS10075 e875f2bfdb040b241786b9bcdb8e8daa 679 SUPERFAMILY SSF101898 411 635 4.97E-8 T 29-03-2018 CHH28_RS10075 e875f2bfdb040b241786b9bcdb8e8daa 679 Gene3D G3DSA:2.120.10.30 370 652 3.5E-6 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CHH28_RS10075 e875f2bfdb040b241786b9bcdb8e8daa 679 Pfam PF05787 Bacterial protein of unknown function (DUF839) 82 641 5.0E-170 T 29-03-2018 IPR008557 Protein of unknown function DUF839 CHH28_RS07640 3cb78e9c5b3f04c5284abe8aff322f13 116 Gene3D G3DSA:3.10.180.10 5 115 3.1E-12 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS07640 3cb78e9c5b3f04c5284abe8aff322f13 116 SUPERFAMILY SSF54593 1 112 4.03E-19 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS17395 22427581cc294aeb75825298d7687ce3 60 Gene3D G3DSA:1.10.10.10 1 49 1.9E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CHH28_RS14675 21663d43b313e2c58efc34587b7ee958 187 Pfam PF01810 LysE type translocator 1 186 1.2E-30 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS08520 3045a7a452c86f70bc3c30a97ad3ec1c 274 Pfam PF01925 Sulfite exporter TauE/SafE 15 268 5.5E-51 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CHH28_RS11235 183d9a898608227edce94431f785ca58 242 Pfam PF12730 ABC-2 family transporter protein 21 175 7.8E-9 T 29-03-2018 IPR032688 ABC-2 family transporter protein GO:0006810 CHH28_RS03855 35f23e38f271a1eeb72b131a9899e887 1859 Gene3D G3DSA:1.20.5.1230 1310 1595 7.3E-4 T 29-03-2018 CHH28_RS03855 35f23e38f271a1eeb72b131a9899e887 1859 Gene3D G3DSA:1.20.120.570 9 205 2.2E-4 T 29-03-2018 CHH28_RS03855 35f23e38f271a1eeb72b131a9899e887 1859 Gene3D G3DSA:1.20.120.570 206 367 5.3E-4 T 29-03-2018 CHH28_RS03855 35f23e38f271a1eeb72b131a9899e887 1859 Pfam PF13946 Domain of unknown function (DUF4214) 1644 1693 4.2E-9 T 29-03-2018 IPR025282 Domain of unknown function DUF4214 CHH28_RS03855 35f23e38f271a1eeb72b131a9899e887 1859 Gene3D G3DSA:1.20.120.20 577 784 1.5E-5 T 29-03-2018 CHH28_RS13125 d87bf62526de610cb5dbf5481b4369c2 256 Gene3D G3DSA:3.40.50.1110 53 238 9.3E-23 T 29-03-2018 CHH28_RS13125 d87bf62526de610cb5dbf5481b4369c2 256 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 57 221 8.7E-16 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain CHH28_RS13125 d87bf62526de610cb5dbf5481b4369c2 256 SUPERFAMILY SSF52266 52 231 7.02E-28 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain CHH28_RS05410 753f0a0df65a41873b3062875f9e1c98 106 Pfam PF07027 Protein of unknown function (DUF1318) 17 106 1.2E-24 T 29-03-2018 IPR008309 Uncharacterised conserved protein UCP025560 CHH28_RS05410 753f0a0df65a41873b3062875f9e1c98 106 PIRSF PIRSF025560 1 106 2.6E-26 T 29-03-2018 IPR008309 Uncharacterised conserved protein UCP025560 CHH28_RS14810 4602268a6c931e3eaec2e3ad34cd7fce 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 132 1.8E-30 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CHH28_RS16515 d876a8d7867ade15a24b68b9f0f1d00e 280 Pfam PF00756 Putative esterase 24 273 2.1E-62 T 29-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CHH28_RS16515 d876a8d7867ade15a24b68b9f0f1d00e 280 SUPERFAMILY SSF53474 4 278 1.34E-88 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS16515 d876a8d7867ade15a24b68b9f0f1d00e 280 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 277 6.3E-122 T 29-03-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 CHH28_RS16515 d876a8d7867ade15a24b68b9f0f1d00e 280 Gene3D G3DSA:3.40.50.1820 1 279 3.8E-44 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS03215 e68b8986546cf00699178b2a24841153 196 Pfam PF05728 Uncharacterised protein family (UPF0227) 7 194 8.4E-50 T 29-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CHH28_RS03215 e68b8986546cf00699178b2a24841153 196 SUPERFAMILY SSF53474 3 193 3.24E-17 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS03215 e68b8986546cf00699178b2a24841153 196 Gene3D G3DSA:3.40.50.1820 2 196 1.1E-16 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS11240 d28f9e2f1e373a16b39301d86bfcc9d2 612 Gene3D G3DSA:1.20.1000.10 21 579 5.1E-6 T 29-03-2018 CHH28_RS11240 d28f9e2f1e373a16b39301d86bfcc9d2 612 Pfam PF09822 ABC-type uncharacterized transport system 29 293 2.1E-64 T 29-03-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 CHH28_RS17625 864ebe417d98c2e9967aa899382e5e8e 94 Pfam PF06305 Lipopolysaccharide assembly protein A domain 26 88 1.3E-17 T 29-03-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 CHH28_RS03295 8b74b99bad076da3710e56d02035d7eb 291 SUPERFAMILY SSF109604 13 283 4.08E-66 T 29-03-2018 CHH28_RS03295 8b74b99bad076da3710e56d02035d7eb 291 Pfam PF08668 HDOD domain 19 211 1.0E-54 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD CHH28_RS03295 8b74b99bad076da3710e56d02035d7eb 291 Gene3D G3DSA:1.10.3210.10 1 279 6.1E-42 T 29-03-2018 CHH28_RS06710 6e0619ee4b489ccc6199fe7b3ee146d1 304 Gene3D G3DSA:1.20.190.10 35 268 2.4E-7 T 29-03-2018 CHH28_RS07520 98b22f7eb1239c1bd28357af878dd262 498 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 484 46.037 T 29-03-2018 IPR003846 Uncharacterised protein family UPF0061 CHH28_RS07520 98b22f7eb1239c1bd28357af878dd262 498 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 3 468 3.0E-128 T 29-03-2018 IPR003846 Uncharacterised protein family UPF0061 CHH28_RS11115 120d4d1bc187c9ea878926c8e2bf52ab 217 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 6 81 5.4E-16 T 29-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 CHH28_RS11115 120d4d1bc187c9ea878926c8e2bf52ab 217 SUPERFAMILY SSF89069 5 70 1.09E-10 T 29-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 CHH28_RS17150 8e11146edf2324b94f649a9751ebe483 283 SUPERFAMILY SSF52402 16 235 1.01E-54 T 29-03-2018 CHH28_RS17150 8e11146edf2324b94f649a9751ebe483 283 PIRSF PIRSF004976 2 273 2.6E-71 T 29-03-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 CHH28_RS17150 8e11146edf2324b94f649a9751ebe483 283 Gene3D G3DSA:3.40.50.620 7 241 1.2E-40 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CHH28_RS17150 8e11146edf2324b94f649a9751ebe483 283 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 9 270 57.13 T 29-03-2018 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 CHH28_RS17150 8e11146edf2324b94f649a9751ebe483 283 Pfam PF01171 PP-loop family 40 203 7.8E-14 T 29-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CHH28_RS07505 9fd3d4a0fae2d72a09cf4f6c0e4f3444 117 Pfam PF00583 Acetyltransferase (GNAT) family 5 88 3.1E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS07505 9fd3d4a0fae2d72a09cf4f6c0e4f3444 117 Gene3D G3DSA:3.40.630.30 2 117 3.8E-26 T 29-03-2018 CHH28_RS07505 9fd3d4a0fae2d72a09cf4f6c0e4f3444 117 SUPERFAMILY SSF55729 3 114 2.92E-29 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS03340 df02871cd0ccf9286d1e3e91a5224c92 153 Pfam PF01878 EVE domain 3 149 1.4E-51 T 29-03-2018 IPR002740 EVE domain CHH28_RS03340 df02871cd0ccf9286d1e3e91a5224c92 153 Gene3D G3DSA:3.10.590.10 1 153 8.0E-57 T 29-03-2018 CHH28_RS03340 df02871cd0ccf9286d1e3e91a5224c92 153 SUPERFAMILY SSF88697 1 152 8.29E-57 T 29-03-2018 IPR015947 PUA-like domain CHH28_RS07535 b0dd1c052fd0f4870aa1ba636f307a06 132 Pfam PF13586 Transposase DDE domain 44 130 7.2E-13 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS07535 b0dd1c052fd0f4870aa1ba636f307a06 132 Gene3D G3DSA:3.90.350.10 1 117 6.2E-6 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS00750 be9d526d8ca42fc352b5b45941e21e88 200 Pfam PF01813 ATP synthase subunit D 11 192 1.3E-32 T 29-03-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CHH28_RS00750 be9d526d8ca42fc352b5b45941e21e88 200 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 1 196 2.5E-24 T 29-03-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 CHH28_RS19060 c48746d021854ee32ff8a2132cd4ef24 234 Pfam PF04012 PspA/IM30 family 2 228 1.2E-43 T 29-03-2018 IPR007157 PspA/IM30 CHH28_RS03345 41cee4403fe97f617e5a0638409cd90f 93 Pfam PF09360 Iron-binding zinc finger CDGSH type 44 68 2.5E-9 T 29-03-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 CHH28_RS03345 41cee4403fe97f617e5a0638409cd90f 93 SMART SM00704 36 73 5.6E-4 T 29-03-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 CHH28_RS02585 ee575a15beedbf2f5b68a605464ac639 279 SUPERFAMILY SSF53850 27 230 4.03E-8 T 29-03-2018 CHH28_RS02070 d476fb938befd39d5d223fb5a5ea8dc2 248 Pfam PF00027 Cyclic nucleotide-binding domain 81 162 9.8E-10 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CHH28_RS02070 d476fb938befd39d5d223fb5a5ea8dc2 248 Gene3D G3DSA:2.60.120.10 42 244 9.5E-13 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CHH28_RS02070 d476fb938befd39d5d223fb5a5ea8dc2 248 SUPERFAMILY SSF51206 73 194 2.75E-16 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CHH28_RS16425 f4b69ffd48de8c5c07cfb0ba89047c95 216 SUPERFAMILY SSF69318 13 66 5.1E-5 T 29-03-2018 CHH28_RS16425 f4b69ffd48de8c5c07cfb0ba89047c95 216 SUPERFAMILY SSF69318 99 120 5.1E-5 T 29-03-2018 CHH28_RS09945 4fd81ad7729b96723f8f0ab515421cb5 159 SUPERFAMILY SSF55729 11 147 1.51E-21 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS09945 4fd81ad7729b96723f8f0ab515421cb5 159 Gene3D G3DSA:3.40.630.30 2 158 8.0E-20 T 29-03-2018 CHH28_RS09945 4fd81ad7729b96723f8f0ab515421cb5 159 Pfam PF13673 Acetyltransferase (GNAT) domain 35 143 1.1E-10 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS13360 6a35ff219431f96f47c7921c4446765e 66 Pfam PF10723 Replication regulatory protein RepB 2 62 2.6E-5 T 29-03-2018 IPR019661 Replication regulatory protein RepA2 GO:0006276 CHH28_RS12035 6fc51d1947055f2206818e918aba2ea7 383 Pfam PF00487 Fatty acid desaturase 44 270 4.0E-19 T 29-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CHH28_RS12035 6fc51d1947055f2206818e918aba2ea7 383 PRINTS PR00075 Fatty acid desaturase family 1 signature 191 212 2.4E-29 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CHH28_RS12035 6fc51d1947055f2206818e918aba2ea7 383 PRINTS PR00075 Fatty acid desaturase family 1 signature 102 131 2.4E-29 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CHH28_RS12035 6fc51d1947055f2206818e918aba2ea7 383 PRINTS PR00075 Fatty acid desaturase family 1 signature 234 248 2.4E-29 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CHH28_RS12035 6fc51d1947055f2206818e918aba2ea7 383 PRINTS PR00075 Fatty acid desaturase family 1 signature 64 84 2.4E-29 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CHH28_RS12035 6fc51d1947055f2206818e918aba2ea7 383 PRINTS PR00075 Fatty acid desaturase family 1 signature 41 63 2.4E-29 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CHH28_RS12035 6fc51d1947055f2206818e918aba2ea7 383 PIRSF PIRSF000345 1 331 4.7E-97 T 29-03-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 CHH28_RS10555 25acb6b15554a195cf37a6d918f766d7 171 Pfam PF04186 FxsA cytoplasmic membrane protein 5 108 1.7E-31 T 29-03-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 CHH28_RS03655 019166dcee861d5ea9dc490842dcbfb5 134 Pfam PF04241 Protein of unknown function (DUF423) 20 110 3.7E-29 T 29-03-2018 IPR006696 Protein of unknown function DUF423 CHH28_RS11280 0115fab641b3841272278439686a900e 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 5.4E-57 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CHH28_RS11280 0115fab641b3841272278439686a900e 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.443 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CHH28_RS11280 0115fab641b3841272278439686a900e 141 SMART SM00562 3 140 4.3E-89 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CHH28_RS11280 0115fab641b3841272278439686a900e 141 SUPERFAMILY SSF54919 1 140 1.3E-58 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CHH28_RS11280 0115fab641b3841272278439686a900e 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.3E-42 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CHH28_RS11280 0115fab641b3841272278439686a900e 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.3E-42 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CHH28_RS11280 0115fab641b3841272278439686a900e 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.3E-42 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CHH28_RS11280 0115fab641b3841272278439686a900e 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.3E-42 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CHH28_RS11280 0115fab641b3841272278439686a900e 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.3E-42 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CHH28_RS11280 0115fab641b3841272278439686a900e 141 Gene3D G3DSA:3.30.70.141 56 140 6.5E-36 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CHH28_RS11280 0115fab641b3841272278439686a900e 141 Gene3D G3DSA:3.30.70.141 1 55 5.0E-16 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CHH28_RS17260 67077fad0c9b48ae7eaa2f7741202620 168 TIGRFAM TIGR03546 TIGR03546: TIGR03546 family protein 4 155 5.9E-44 T 29-03-2018 IPR019935 Conserved hypothetical protein CHP03546 CHH28_RS17260 67077fad0c9b48ae7eaa2f7741202620 168 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 8 140 1.3E-8 T 29-03-2018 IPR018639 Domain of unknown function DUF2062 CHH28_RS05810 278999718a55d55faf3c494b48d5d232 247 Gene3D G3DSA:1.20.58.60 43 101 0.0018 T 29-03-2018 CHH28_RS05810 278999718a55d55faf3c494b48d5d232 247 Gene3D G3DSA:1.20.5.360 102 120 7.5E-4 T 29-03-2018 CHH28_RS08935 76b063ba13bfba0a900e933391d79b54 103 Gene3D G3DSA:1.10.260.40 26 96 1.5E-5 T 29-03-2018 CHH28_RS17195 19d9dee918ee2cd46af597b433e298c5 231 Pfam PF01863 Protein of unknown function DUF45 28 225 1.7E-46 T 29-03-2018 IPR002725 Protein of unknown function DUF45 CHH28_RS13650 54a9b4e25dad87df6f35ebe82b455d9e 312 Pfam PF13448 Domain of unknown function (DUF4114) 159 263 1.0E-10 T 29-03-2018 IPR025193 Domain of unknown function DUF4114 CHH28_RS13165 2cec5e1291b3f1f08003e5144e94b6f4 62 Pfam PF11137 Protein of unknown function (DUF2909) 2 61 9.2E-12 T 29-03-2018 IPR021313 Protein of unknown function DUF2909 CHH28_RS02915 1ffe42587299a7c342c120dd3533cc2a 227 Gene3D G3DSA:1.25.40.10 48 111 0.042 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS02915 1ffe42587299a7c342c120dd3533cc2a 227 SUPERFAMILY SSF48452 82 155 3.04E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS02915 1ffe42587299a7c342c120dd3533cc2a 227 SUPERFAMILY SSF48452 189 207 3.04E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS02915 1ffe42587299a7c342c120dd3533cc2a 227 Gene3D G3DSA:1.25.40.10 115 227 0.0046 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS03135 2da6a3596ef2d71bfc59c9b94483561f 404 SUPERFAMILY SSF56935 20 227 8.63E-29 T 29-03-2018 CHH28_RS03135 2da6a3596ef2d71bfc59c9b94483561f 404 SUPERFAMILY SSF56935 275 404 8.63E-29 T 29-03-2018 CHH28_RS03135 2da6a3596ef2d71bfc59c9b94483561f 404 Gene3D G3DSA:2.40.160.10 8 404 2.4E-29 T 29-03-2018 CHH28_RS18065 97289c0e8db8dfa648d961bfc4228578 160 Gene3D G3DSA:3.10.50.30 78 159 3.3E-8 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CHH28_RS02180 6476ef41c1decc5981739aff4a857eff 468 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 465 7.2E-133 T 29-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 CHH28_RS09005 4b40d1f4d265ffcbfa441567c0855db5 157 Pfam PF04463 Protein of unknown function (DUF523) 7 142 4.6E-43 T 29-03-2018 IPR007553 Domain of unknown function DUF523 CHH28_RS13745 aed94c22da6d66441c420f405922f426 204 Gene3D G3DSA:3.40.30.10 45 167 8.3E-4 T 29-03-2018 CHH28_RS13745 aed94c22da6d66441c420f405922f426 204 SUPERFAMILY SSF52833 65 198 3.92E-6 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS07415 c8c3441ab3183eecd880b27e5e4546d4 117 Pfam PF11804 Protein of unknown function (DUF3325) 41 111 7.8E-8 T 29-03-2018 IPR021762 Protein of unknown function DUF3325 CHH28_RS00870 e6be63c5d50770f4485c07b7169142aa 618 Pfam PF08811 Protein of unknown function (DUF1800) 87 615 1.5E-84 T 29-03-2018 IPR014917 Protein of unknown function DUF1800 CHH28_RS12230 7bba5e09b7a191a644ea8e4971cef8bf 360 Pfam PF07728 AAA domain (dynein-related subfamily) 80 219 2.0E-31 T 29-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CHH28_RS12230 7bba5e09b7a191a644ea8e4971cef8bf 360 Gene3D G3DSA:3.40.50.300 63 225 4.5E-17 T 29-03-2018 CHH28_RS12230 7bba5e09b7a191a644ea8e4971cef8bf 360 SUPERFAMILY SSF52540 58 270 7.27E-20 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS17515 0df44e75ca63766235a0f4fa7b8f9d23 342 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 23 254 4.5E-64 T 29-03-2018 IPR018642 Protein of unknown function DUF2066 CHH28_RS07360 5fd7d54e984b643aaa662bc70dcb3c9f 447 Gene3D G3DSA:2.40.160.10 34 447 1.6E-9 T 29-03-2018 CHH28_RS03615 5a809b0d7ac147b6efc0b9bfd1d871e8 138 SUPERFAMILY SSF54637 5 135 2.92E-30 T 29-03-2018 IPR029069 HotDog domain CHH28_RS03615 5a809b0d7ac147b6efc0b9bfd1d871e8 138 Pfam PF03061 Thioesterase superfamily 19 98 8.6E-7 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CHH28_RS03615 5a809b0d7ac147b6efc0b9bfd1d871e8 138 Gene3D G3DSA:3.10.129.10 2 136 1.2E-20 T 29-03-2018 CHH28_RS10340 dc9fdd2b8422a64f7df6c27c8475b537 563 Pfam PF13240 zinc-ribbon domain 470 492 3.0E-6 T 29-03-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 CHH28_RS10340 dc9fdd2b8422a64f7df6c27c8475b537 563 Gene3D G3DSA:3.40.50.300 37 334 7.5E-9 T 29-03-2018 CHH28_RS10340 dc9fdd2b8422a64f7df6c27c8475b537 563 SUPERFAMILY SSF52540 124 205 3.89E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS10340 dc9fdd2b8422a64f7df6c27c8475b537 563 SUPERFAMILY SSF52540 241 252 3.89E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS10340 dc9fdd2b8422a64f7df6c27c8475b537 563 SUPERFAMILY SSF52540 32 84 3.89E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS16645 c5e75e4015836f4fd45f2bcbc8d7048b 684 Pfam PF03169 OPT oligopeptide transporter protein 17 647 3.3E-94 T 29-03-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 CHH28_RS16645 c5e75e4015836f4fd45f2bcbc8d7048b 684 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 13 648 3.1E-81 T 29-03-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 CHH28_RS16645 c5e75e4015836f4fd45f2bcbc8d7048b 684 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 17 648 2.7E-160 T 29-03-2018 IPR004814 Oligopeptide transporter OPT CHH28_RS19175 8a64fec7228c0892772e2ee905166d37 158 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 17 153 3.2E-58 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS19175 8a64fec7228c0892772e2ee905166d37 158 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 17 152 4.9E-55 T 29-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS19175 8a64fec7228c0892772e2ee905166d37 158 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 11 156 31.197 T 29-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS19175 8a64fec7228c0892772e2ee905166d37 158 SUPERFAMILY SSF52121 7 156 3.53E-61 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS19175 8a64fec7228c0892772e2ee905166d37 158 Gene3D G3DSA:3.40.50.960 4 157 1.2E-63 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CHH28_RS17430 a610760a8921d2a4c5044198b3a3ae2c 126 Pfam PF10734 Protein of unknown function (DUF2523) 45 123 3.8E-10 T 29-03-2018 IPR019670 Protein of unkown function DUF2523 CHH28_RS07480 2f294181a07f9de3eaa7a2014ceea21d 195 SUPERFAMILY SSF109604 5 182 9.42E-38 T 29-03-2018 CHH28_RS07480 2f294181a07f9de3eaa7a2014ceea21d 195 Gene3D G3DSA:1.10.3210.10 1 193 5.0E-39 T 29-03-2018 CHH28_RS07480 2f294181a07f9de3eaa7a2014ceea21d 195 Pfam PF13023 HD domain 14 175 4.4E-44 T 29-03-2018 IPR006674 HD domain CHH28_RS13875 b4a6063023d37afd788ad5c822992d05 168 SUPERFAMILY SSF111304 3 153 2.22E-18 T 29-03-2018 IPR023627 Recombination protein RecR CHH28_RS03590 b87e7bd5619493155197f0c70c910761 121 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 7.2E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS03255 e259e245a69a27873cec33dfe6c1d322 245 Pfam PF05742 Transport and Golgi organisation 2 1 216 7.8E-57 T 29-03-2018 IPR008551 Transport and Golgi organisation protein 2 CHH28_RS09160 9951d53fd239d7e3abb60390a92a6041 276 Pfam PF00482 Type II secretion system (T2SS), protein F 133 260 9.5E-13 T 29-03-2018 IPR018076 Type II secretion system F domain CHH28_RS06300 ccadefc703f9ff312b400f26648562f2 303 Pfam PF15575 Immunity protein 49 86 272 3.3E-16 T 29-03-2018 IPR029074 Immunity protein 49 CHH28_RS09165 784fcbeffff2820fb70adc3391c58aed 349 SUPERFAMILY SSF48452 72 122 1.14E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS09165 784fcbeffff2820fb70adc3391c58aed 349 SUPERFAMILY SSF48452 163 240 1.14E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS09165 784fcbeffff2820fb70adc3391c58aed 349 Gene3D G3DSA:1.25.40.10 65 163 6.3E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS09165 784fcbeffff2820fb70adc3391c58aed 349 Gene3D G3DSA:1.25.40.10 202 303 0.0018 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS09165 784fcbeffff2820fb70adc3391c58aed 349 Gene3D G3DSA:1.25.40.10 164 201 0.39 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS16255 adf6e0c33dd54330cbbf38a9971eb314 456 Gene3D G3DSA:2.60.120.380 225 317 1.3E-7 T 29-03-2018 CHH28_RS15055 7baeaa08ae8506238efe0c54d2cdfbbf 164 Pfam PF02674 Colicin V production protein 4 144 3.3E-36 T 29-03-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CHH28_RS12950 e566774c2124203180777997d41e764b 469 Pfam PF00817 impB/mucB/samB family 31 145 7.4E-8 T 29-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CHH28_RS12950 e566774c2124203180777997d41e764b 469 SUPERFAMILY SSF56672 1 219 3.83E-26 T 29-03-2018 CHH28_RS04060 22a79a05b3e089924e1fe940e1aeb5bc 301 Gene3D G3DSA:3.40.190.10 5 275 2.3E-6 T 29-03-2018 CHH28_RS14905 2051c221578b7b47cbbe46b475d72edd 325 SUPERFAMILY SSF52096 214 274 1.06E-41 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS14905 2051c221578b7b47cbbe46b475d72edd 325 SUPERFAMILY SSF52096 55 185 1.06E-41 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CHH28_RS14905 2051c221578b7b47cbbe46b475d72edd 325 Pfam PF01343 Peptidase family S49 142 280 1.4E-32 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CHH28_RS14905 2051c221578b7b47cbbe46b475d72edd 325 PRINTS PR00127 Clp protease catalytic subunit P signature 110 130 4.6E-5 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CHH28_RS14905 2051c221578b7b47cbbe46b475d72edd 325 PRINTS PR00127 Clp protease catalytic subunit P signature 251 270 4.6E-5 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CHH28_RS14905 2051c221578b7b47cbbe46b475d72edd 325 PRINTS PR00127 Clp protease catalytic subunit P signature 146 163 4.6E-5 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CHH28_RS14905 2051c221578b7b47cbbe46b475d72edd 325 Gene3D G3DSA:3.90.226.10 70 285 2.2E-32 T 29-03-2018 CHH28_RS19745 a979a39674627d945e10ff0c1ef4195e 175 Pfam PF13511 Domain of unknown function (DUF4124) 15 68 5.4E-6 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 CHH28_RS19745 a979a39674627d945e10ff0c1ef4195e 175 Gene3D G3DSA:2.60.40.10 11 170 6.0E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS00040 a979a39674627d945e10ff0c1ef4195e 175 Pfam PF13511 Domain of unknown function (DUF4124) 15 68 5.4E-6 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 CHH28_RS00040 a979a39674627d945e10ff0c1ef4195e 175 Gene3D G3DSA:2.60.40.10 11 170 6.0E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold CHH28_RS02950 359b1ed2565217452bcf54a8048abd70 393 SUPERFAMILY SSF103365 13 387 7.06E-100 T 29-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 CHH28_RS02950 359b1ed2565217452bcf54a8048abd70 393 TIGRFAM TIGR03073 release_rtcB: release factor H-coupled RctB family protein 14 382 2.7E-156 T 29-03-2018 IPR017510 Release factor H-coupled RctB family protein CHH28_RS02950 359b1ed2565217452bcf54a8048abd70 393 Pfam PF01139 tRNA-splicing ligase RtcB 125 387 1.5E-58 T 29-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 CHH28_RS02950 359b1ed2565217452bcf54a8048abd70 393 Pfam PF01139 tRNA-splicing ligase RtcB 29 103 9.3E-13 T 29-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 CHH28_RS06890 499e3813cd9f28a9950404352079787c 431 Pfam PF14298 Domain of unknown function (DUF4374) 220 420 2.0E-17 T 29-03-2018 IPR025401 Protein of unknown function DUF4374 CHH28_RS06890 499e3813cd9f28a9950404352079787c 431 Gene3D G3DSA:2.120.10.30 36 316 0.14 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CHH28_RS00855 05c29937895b1481608871c2563cb424 61 Gene3D G3DSA:3.30.50.10 6 47 1.1E-10 T 29-03-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 CHH28_RS00855 05c29937895b1481608871c2563cb424 61 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 4 43 4.6E-20 T 29-03-2018 IPR017136 Uncharacterised conserved protein UCP037205 CHH28_RS10245 f2187d7c154b3e92c1c08d2f78ca2417 706 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 261 699 8.3E-20 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CHH28_RS16120 1375cfc7711cdcddcd05c516a085dacb 177 Pfam PF00578 AhpC/TSA family 11 141 7.6E-19 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CHH28_RS16120 1375cfc7711cdcddcd05c516a085dacb 177 SUPERFAMILY SSF52833 6 171 8.5E-29 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS16120 1375cfc7711cdcddcd05c516a085dacb 177 Gene3D G3DSA:3.40.30.10 2 166 1.4E-21 T 29-03-2018 CHH28_RS03520 1f8a1de3e3266e249bc72e5c780129fb 146 Pfam PF13511 Domain of unknown function (DUF4124) 43 90 2.1E-10 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 CHH28_RS16850 3e669963fdabaf35b4eb6cca3fbcf982 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 125 145 3.7E-57 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16850 3e669963fdabaf35b4eb6cca3fbcf982 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 66 86 3.7E-57 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16850 3e669963fdabaf35b4eb6cca3fbcf982 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 208 232 3.7E-57 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16850 3e669963fdabaf35b4eb6cca3fbcf982 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 104 124 3.7E-57 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16850 3e669963fdabaf35b4eb6cca3fbcf982 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 49 66 3.7E-57 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16850 3e669963fdabaf35b4eb6cca3fbcf982 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 160 186 3.7E-57 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS16850 3e669963fdabaf35b4eb6cca3fbcf982 248 Pfam PF01578 Cytochrome C assembly protein 29 188 1.6E-27 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CHH28_RS16850 3e669963fdabaf35b4eb6cca3fbcf982 248 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 49 232 8.2E-78 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CHH28_RS15965 1052e1ba571eb1a43d92796cbd71c0fe 167 Gene3D G3DSA:2.40.160.20 13 167 1.2E-6 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS15770 afef6158cb47205d70d19c0414c7e1e5 256 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CHH28_RS15770 afef6158cb47205d70d19c0414c7e1e5 256 SUPERFAMILY SSF52540 15 248 2.03E-81 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS15770 afef6158cb47205d70d19c0414c7e1e5 256 Gene3D G3DSA:3.40.50.300 11 255 4.5E-75 T 29-03-2018 CHH28_RS15770 afef6158cb47205d70d19c0414c7e1e5 256 PIRSF PIRSF039085 12 255 4.4E-110 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CHH28_RS15770 afef6158cb47205d70d19c0414c7e1e5 256 SMART SM00382 40 227 1.2E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CHH28_RS15770 afef6158cb47205d70d19c0414c7e1e5 256 Pfam PF00005 ABC transporter 31 179 1.4E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CHH28_RS02780 4e7dda4f4c2cafee15ff4cf22f127af1 291 Gene3D G3DSA:2.40.160.20 169 290 0.028 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS02780 4e7dda4f4c2cafee15ff4cf22f127af1 291 Gene3D G3DSA:2.40.160.20 41 164 0.0056 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CHH28_RS18755 764395125474feb768a3025da537bb5a 503 Pfam PF02120 Flagellar hook-length control protein FliK 378 460 4.0E-25 T 29-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal CHH28_RS07295 085ada9e5bae113908f24c47b0e87348 279 Pfam PF14891 Effector protein 48 234 7.0E-17 T 29-03-2018 IPR028208 Effector protein NleD-like CHH28_RS07295 085ada9e5bae113908f24c47b0e87348 279 Gene3D G3DSA:3.90.1240.10 35 208 8.7E-10 T 29-03-2018 CHH28_RS11590 90f031b54b3be1a80ecac1eb9e33caff 594 Pfam PF00474 Sodium:solute symporter family 33 296 5.4E-37 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CHH28_RS11590 90f031b54b3be1a80ecac1eb9e33caff 594 Pfam PF00474 Sodium:solute symporter family 395 510 2.5E-15 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CHH28_RS11590 90f031b54b3be1a80ecac1eb9e33caff 594 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 585 3.0E-254 T 29-03-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily CHH28_RS02955 c8256190bc0a5e7fe806657f5fc36b1c 212 Gene3D G3DSA:3.30.160.20 107 188 1.3E-23 T 29-03-2018 CHH28_RS02955 c8256190bc0a5e7fe806657f5fc36b1c 212 Pfam PF00472 RF-1 domain 114 196 2.2E-22 T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CHH28_RS02955 c8256190bc0a5e7fe806657f5fc36b1c 212 SUPERFAMILY SSF75620 3 208 1.28E-45 T 29-03-2018 CHH28_RS02955 c8256190bc0a5e7fe806657f5fc36b1c 212 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 123 139 - T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CHH28_RS02955 c8256190bc0a5e7fe806657f5fc36b1c 212 TIGRFAM TIGR03072 release_prfH: putative peptide chain release factor H 4 209 4.6E-77 T 29-03-2018 IPR017509 Putative peptide chain release factor H CHH28_RS04105 472437509f9db7268b09fa1596b5df25 132 Pfam PF13586 Transposase DDE domain 44 130 7.4E-11 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS04105 472437509f9db7268b09fa1596b5df25 132 Gene3D G3DSA:3.90.350.10 1 118 2.3E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CHH28_RS01925 ec3811fb2c2cb2c12fb85606d65530c9 265 Pfam PF07277 SapC 8 228 4.4E-58 T 29-03-2018 IPR010836 SapC CHH28_RS07720 eed97ec238e4a7a30dcd5b3f02ae0227 320 Pfam PF00892 EamA-like transporter family 179 309 1.4E-7 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS07720 eed97ec238e4a7a30dcd5b3f02ae0227 320 Pfam PF00892 EamA-like transporter family 11 139 2.8E-18 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS07720 eed97ec238e4a7a30dcd5b3f02ae0227 320 SUPERFAMILY SSF103481 41 141 6.28E-16 T 29-03-2018 CHH28_RS07720 eed97ec238e4a7a30dcd5b3f02ae0227 320 SUPERFAMILY SSF103481 218 314 2.48E-7 T 29-03-2018 CHH28_RS17105 0f3e04e4979ee7626dde240628884886 59 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 44 2.1E-9 T 29-03-2018 IPR008621 Cbb3-type cytochrome oxidase component CHH28_RS09185 8d167a5e9aad07cd6cead9a5b960ec70 157 Pfam PF00085 Thioredoxin 36 94 4.3E-10 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 CHH28_RS09185 8d167a5e9aad07cd6cead9a5b960ec70 157 SUPERFAMILY SSF52833 2 152 6.59E-24 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS09185 8d167a5e9aad07cd6cead9a5b960ec70 157 Gene3D G3DSA:3.40.30.10 16 155 1.5E-20 T 29-03-2018 CHH28_RS09185 8d167a5e9aad07cd6cead9a5b960ec70 157 ProSitePatterns PS00194 Thioredoxin family active site. 45 63 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CHH28_RS17210 00eb6dc3d143e7298bbc613608ed441a 371 Gene3D G3DSA:3.40.1130.10 54 334 2.4E-13 T 29-03-2018 CHH28_RS17210 00eb6dc3d143e7298bbc613608ed441a 371 Pfam PF01553 Acyltransferase 92 179 8.3E-7 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CHH28_RS01280 c7f1dcbf8f245ea28f6700da35ca406f 253 Pfam PF01203 Type II secretion system (T2SS), protein N 45 214 1.5E-17 T 29-03-2018 IPR022792 Type II secretion system, protein N CHH28_RS08830 1780cb7d96f896a5804e9e4729e0fb3a 66 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 1.5E-13 T 29-03-2018 IPR021309 Protein of unknown function DUF2892 CHH28_RS06575 02eced2f5c137e179c899fd0cd9323db 158 Gene3D G3DSA:1.10.3760.10 52 156 5.4E-40 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CHH28_RS06575 02eced2f5c137e179c899fd0cd9323db 158 PIRSF PIRSF006162 3 158 2.2E-49 T 29-03-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CHH28_RS06575 02eced2f5c137e179c899fd0cd9323db 158 SUPERFAMILY SSF101307 8 154 5.1E-45 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CHH28_RS06575 02eced2f5c137e179c899fd0cd9323db 158 Pfam PF04608 Phosphatidylglycerophosphatase A 14 153 2.3E-52 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CHH28_RS03430 1419973105591566f08ff8cfd673414c 339 Pfam PF01594 AI-2E family transporter 16 325 8.4E-55 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like CHH28_RS07020 4961aea312b8fee231edd63866da20d2 144 Pfam PF09335 SNARE associated Golgi protein 26 135 4.4E-13 T 29-03-2018 IPR032816 SNARE associated Golgi protein CHH28_RS07020 4961aea312b8fee231edd63866da20d2 144 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 16 113 0.001 T 29-03-2018 IPR020143 Uncharacterised protein family, RP436 CHH28_RS14550 ea3aaed6c970e9e2f278b4670b0e952f 205 Pfam PF12137 RNA polymerase recycling family C-terminal 2 203 1.4E-54 T 29-03-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 CHH28_RS12870 85a80bfc541ea36a936ed5be86e05f28 350 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 52 318 5.3E-31 T 29-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CHH28_RS11985 58d95e30ea19644eeaf3057657d854f6 205 Pfam PF03923 Uncharacterized lipoprotein 59 203 2.1E-20 T 29-03-2018 IPR005619 Uncharacterised protein family, YajG CHH28_RS14690 3efa3e53545c14b733837ca5262d46c7 602 Gene3D G3DSA:4.10.940.10 456 580 3.9E-21 T 29-03-2018 CHH28_RS02420 131758a8a484173ba0d16d6ce99f2c1d 266 Gene3D G3DSA:3.40.190.10 3 247 1.8E-4 T 29-03-2018 CHH28_RS17805 b3a07a8339ca51f14f571f02a6987d68 314 Pfam PF16234 Domain of unknown function (DUF4892) 37 195 1.0E-17 T 29-03-2018 IPR032608 Protein of unknown function DUF4892 CHH28_RS00095 e6dff266282a88d27bd01b9abde0d420 407 Pfam PF00482 Type II secretion system (T2SS), protein F 70 193 2.3E-29 T 29-03-2018 IPR018076 Type II secretion system F domain CHH28_RS00095 e6dff266282a88d27bd01b9abde0d420 407 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 5.5E-26 T 29-03-2018 IPR018076 Type II secretion system F domain CHH28_RS00095 e6dff266282a88d27bd01b9abde0d420 407 Gene3D G3DSA:3.30.70.1120 101 168 0.0094 T 29-03-2018 CHH28_RS00095 e6dff266282a88d27bd01b9abde0d420 407 Gene3D G3DSA:3.30.70.1120 322 372 0.0044 T 29-03-2018 CHH28_RS00095 e6dff266282a88d27bd01b9abde0d420 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 5.7E-11 T 29-03-2018 IPR003004 GspF/PilC family CHH28_RS00095 e6dff266282a88d27bd01b9abde0d420 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 5.7E-11 T 29-03-2018 IPR003004 GspF/PilC family CHH28_RS00095 e6dff266282a88d27bd01b9abde0d420 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 5.7E-11 T 29-03-2018 IPR003004 GspF/PilC family CHH28_RS00095 e6dff266282a88d27bd01b9abde0d420 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 5.7E-11 T 29-03-2018 IPR003004 GspF/PilC family CHH28_RS10755 3694310b3b97a3af16516a5716f81527 241 Gene3D G3DSA:3.40.190.10 1 138 5.5E-6 T 29-03-2018 CHH28_RS09345 b2d5b2b08351ecdf39719cff4131020f 188 SMART SM01144 2 185 5.1E-45 T 29-03-2018 IPR005636 DTW CHH28_RS09345 b2d5b2b08351ecdf39719cff4131020f 188 Pfam PF03942 DTW domain 3 165 9.4E-39 T 29-03-2018 IPR005636 DTW CHH28_RS10765 52294a1f4af6196849f50bc31f57a8f4 745 Pfam PF01469 Pentapeptide repeats (8 copies) 92 129 3.1E-6 T 29-03-2018 IPR002989 Mycobacterial pentapeptide repeat CHH28_RS10765 52294a1f4af6196849f50bc31f57a8f4 745 Pfam PF01469 Pentapeptide repeats (8 copies) 127 163 3.8E-6 T 29-03-2018 IPR002989 Mycobacterial pentapeptide repeat CHH28_RS10765 52294a1f4af6196849f50bc31f57a8f4 745 Pfam PF08811 Protein of unknown function (DUF1800) 176 742 2.5E-97 T 29-03-2018 IPR014917 Protein of unknown function DUF1800 CHH28_RS13955 04e78e2de56fe5eeda69d7c03b7ec589 265 Pfam PF04333 MlaA lipoprotein 34 224 1.9E-70 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CHH28_RS13955 04e78e2de56fe5eeda69d7c03b7ec589 265 PRINTS PR01805 VacJ lipoprotein signature 138 155 9.2E-28 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CHH28_RS13955 04e78e2de56fe5eeda69d7c03b7ec589 265 PRINTS PR01805 VacJ lipoprotein signature 34 47 9.2E-28 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CHH28_RS13955 04e78e2de56fe5eeda69d7c03b7ec589 265 PRINTS PR01805 VacJ lipoprotein signature 51 67 9.2E-28 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CHH28_RS13955 04e78e2de56fe5eeda69d7c03b7ec589 265 PRINTS PR01805 VacJ lipoprotein signature 102 119 9.2E-28 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CHH28_RS07915 65670462843f36a194acdcb763948611 975 Pfam PF13332 Haemagluttinin repeat 26 194 5.6E-19 T 29-03-2018 IPR025157 Hemagglutinin repeat CHH28_RS13825 31b77dc36a2eb270b52754da9ed072e8 154 Pfam PF14300 Domain of unknown function (DUF4375) 36 153 1.2E-29 T 29-03-2018 IPR025402 Domain of unknown function DUF4375 CHH28_RS07040 a13bdd67250172d87c3e65007602d898 331 Gene3D G3DSA:1.25.40.20 55 328 7.2E-30 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain CHH28_RS07040 a13bdd67250172d87c3e65007602d898 331 Pfam PF12796 Ankyrin repeats (3 copies) 198 301 1.1E-13 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain CHH28_RS07040 a13bdd67250172d87c3e65007602d898 331 SMART SM00248 270 299 0.0014 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 CHH28_RS07040 a13bdd67250172d87c3e65007602d898 331 SMART SM00248 145 174 4600.0 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 CHH28_RS07040 a13bdd67250172d87c3e65007602d898 331 SMART SM00248 221 250 0.0065 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 CHH28_RS07040 a13bdd67250172d87c3e65007602d898 331 SUPERFAMILY SSF48403 200 325 5.8E-24 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain CHH28_RS07160 bcfbaf16c0be18fdc2ae56d8a307ac0b 111 Gene3D G3DSA:3.90.1590.10 1 110 4.5E-17 T 29-03-2018 CHH28_RS07160 bcfbaf16c0be18fdc2ae56d8a307ac0b 111 SUPERFAMILY SSF51316 4 99 5.23E-18 T 29-03-2018 IPR011057 Mss4-like CHH28_RS13520 5665231055072586256772ccafa0cc39 288 Pfam PF00892 EamA-like transporter family 152 285 6.9E-8 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS13520 5665231055072586256772ccafa0cc39 288 Pfam PF00892 EamA-like transporter family 7 135 2.4E-9 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CHH28_RS13520 5665231055072586256772ccafa0cc39 288 SUPERFAMILY SSF103481 210 287 8.5E-6 T 29-03-2018 CHH28_RS17020 b5bdec8910be1b029a060d2027430b91 181 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 4 181 1.2E-58 T 29-03-2018 IPR018636 Protein of unknown function DUF2058 CHH28_RS12890 a2e3cd8758ff7ec05699eaf6ac33cb70 153 SUPERFAMILY SSF55729 15 150 3.32E-19 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS12890 a2e3cd8758ff7ec05699eaf6ac33cb70 153 Pfam PF00583 Acetyltransferase (GNAT) family 15 133 2.4E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS12890 a2e3cd8758ff7ec05699eaf6ac33cb70 153 Gene3D G3DSA:3.40.630.30 6 153 2.9E-18 T 29-03-2018 CHH28_RS06440 b2dd961c59ee4b05eecdb79ae79dad89 81 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 5 77 5.8E-27 T 29-03-2018 IPR018680 Protein of unknown function DUF2164 CHH28_RS07275 050138b2362c37da0c4c88afd766001a 173 Gene3D G3DSA:3.40.630.30 1 172 7.2E-20 T 29-03-2018 CHH28_RS07275 050138b2362c37da0c4c88afd766001a 173 SUPERFAMILY SSF55729 1 171 3.77E-22 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS07275 050138b2362c37da0c4c88afd766001a 173 Pfam PF00583 Acetyltransferase (GNAT) family 46 149 1.1E-10 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CHH28_RS01590 3fdf9410e865ce8351e8b80c575a687c 238 Pfam PF10277 Frag1/DRAM/Sfk1 family 12 226 5.9E-8 T 29-03-2018 IPR019402 Frag1/DRAM/Sfk1 CHH28_RS06215 2dbe674c555c18cfc912a5cb96345e69 92 Pfam PF10719 Late competence development protein ComFB 8 86 2.5E-23 T 29-03-2018 IPR019657 Late competence development protein ComFB CHH28_RS05910 06d19c85d7c9dad0b72588771cb6094b 76 Gene3D G3DSA:1.20.5.1040 2 55 2.3E-4 T 29-03-2018 CHH28_RS07530 15d8fe908ce3f25a9ac17f6583825d2c 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 8.3E-26 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS01190 f4bc6a8a302845ea3cada8e317331aa7 83 Pfam PF06906 Protein of unknown function (DUF1272) 1 57 1.4E-29 T 29-03-2018 IPR010696 Protein of unknown function DUF1272 CHH28_RS11400 ceedc67170a41483607e68aea688436a 167 Pfam PF04982 HPP family 42 163 3.2E-32 T 29-03-2018 IPR007065 HPP CHH28_RS03320 41b52a25e472c73c58f6e5dc2f488849 79 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 14 77 1.9E-18 T 29-03-2018 IPR012662 Conserved hypothetical protein CHP02449 CHH28_RS03320 41b52a25e472c73c58f6e5dc2f488849 79 Gene3D G3DSA:1.20.5.340 4 78 1.6E-4 T 29-03-2018 CHH28_RS02165 b65747878df54cd4ef09ec79914d2e43 349 Pfam PF07786 Protein of unknown function (DUF1624) 4 213 5.5E-28 T 29-03-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-6798695 CHH28_RS05615 b5fea9d6f11e38ce9c7014a83ee5497e 231 Pfam PF03591 AzlC protein 3 139 2.7E-38 T 29-03-2018 IPR011606 Branched-chain amino acid transport, permease CHH28_RS08915 ca60c626278de97cee7b10e3ba8e6df3 190 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 37 167 3.1E-27 T 29-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CHH28_RS00730 36c59c022a80ad51379400caf872fff4 233 Pfam PF10962 Protein of unknown function (DUF2764) 86 220 2.9E-7 T 29-03-2018 IPR024492 Protein of unknown function DUF2764 CHH28_RS08545 5142616fea9c5d01ff9b7f04ccbe8f30 123 Gene3D G3DSA:3.40.50.300 4 115 1.1E-10 T 29-03-2018 CHH28_RS03945 3e22be20c36cc8c06b1a6c729f164e44 203 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 103 184 2.2E-11 T 29-03-2018 IPR009647 Penicillin-binding, C-terminal CHH28_RS06935 a2a0bad7ad5764ab7f0fcb83d652a8a7 64 Pfam PF14255 Cysteine-rich CPXCG 9 58 6.0E-20 T 29-03-2018 IPR025990 Cysteine-rich CPXCG protein CHH28_RS06935 a2a0bad7ad5764ab7f0fcb83d652a8a7 64 PIRSF PIRSF037225 1 64 3.0E-22 T 29-03-2018 IPR017143 Uncharacterised conserved protein UCP037225 CHH28_RS16795 2308ecdec0c49595977b177e8ee97077 205 Pfam PF03458 UPF0126 domain 90 162 1.7E-20 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 CHH28_RS16795 2308ecdec0c49595977b177e8ee97077 205 Pfam PF03458 UPF0126 domain 6 77 2.1E-18 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 CHH28_RS10995 ec3735800b73d1dbc0bf58a88812f4a8 485 Gene3D G3DSA:2.160.20.10 96 455 1.0E-5 T 29-03-2018 IPR012334 Pectin lyase fold CHH28_RS13670 41630075f211e4ed536620220d8866cd 479 Pfam PF01943 Polysaccharide biosynthesis protein 11 273 2.1E-9 T 29-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CHH28_RS18505 4ec7a3750ce1883f93059acdfa0d8968 418 Pfam PF03600 Citrate transporter 19 363 7.7E-26 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CHH28_RS10460 e4a9153c0ffc12a3da5f54d042e447ea 122 Gene3D G3DSA:3.40.30.10 29 122 1.8E-15 T 29-03-2018 CHH28_RS10460 e4a9153c0ffc12a3da5f54d042e447ea 122 SUPERFAMILY SSF52833 42 122 2.13E-17 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS10460 e4a9153c0ffc12a3da5f54d042e447ea 122 Pfam PF00462 Glutaredoxin 45 97 5.6E-12 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CHH28_RS09175 0c05cf074f39a86e7f589deade83c60c 173 Pfam PF16964 Putative tight adherence pilin protein F 6 173 7.5E-8 T 29-03-2018 IPR031582 Putative tight adherence pilin protein F CHH28_RS05545 d16fec903e66bf5969c647a36a2d9a14 428 Pfam PF04932 O-Antigen ligase 189 345 6.3E-15 T 29-03-2018 IPR007016 O-antigen ligase-related CHH28_RS18630 ef3252db2eba1a52ff7e16bf5fd63ed8 159 Pfam PF06127 Protein of unknown function (DUF962) 5 153 7.6E-25 T 29-03-2018 IPR009305 Protein of unknown function DUF962 CHH28_RS05315 3ba5b6e0af35ad1feff5b03198d36f6d 112 Pfam PF06127 Protein of unknown function (DUF962) 11 104 1.1E-33 T 29-03-2018 IPR009305 Protein of unknown function DUF962 CHH28_RS03085 f46a8657366a639337a545a7b43b7035 262 Pfam PF01925 Sulfite exporter TauE/SafE 8 258 1.1E-54 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CHH28_RS06735 5e5a1129d7909cb0c8c63defe9c2ba14 148 Pfam PF04191 Phospholipid methyltransferase 37 135 2.3E-16 T 29-03-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 CHH28_RS05715 25bd7987ef81a5fbfb354b86f78016c7 269 Gene3D G3DSA:3.40.190.10 45 163 1.0E-7 T 29-03-2018 CHH28_RS05715 25bd7987ef81a5fbfb354b86f78016c7 269 SUPERFAMILY SSF53850 45 266 7.15E-28 T 29-03-2018 CHH28_RS05715 25bd7987ef81a5fbfb354b86f78016c7 269 Gene3D G3DSA:3.40.190.10 164 268 6.8E-8 T 29-03-2018 CHH28_RS05715 25bd7987ef81a5fbfb354b86f78016c7 269 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 69 266 1.8E-10 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CHH28_RS19495 c105a8ab29a4fc2e688b13df1678d70b 336 Gene3D G3DSA:1.20.1000.10 6 244 1.5E-4 T 29-03-2018 CHH28_RS17815 9488fc3fb44dc0a8588790b9d450dd19 132 Pfam PF14343 PrcB C-terminal 48 99 3.0E-11 T 29-03-2018 IPR025748 PrcB C-terminal domain CHH28_RS16885 7a9c6248f261f6ea028e3cdccb2024d6 201 SUPERFAMILY SSF52833 90 191 1.09E-19 T 29-03-2018 IPR012336 Thioredoxin-like fold CHH28_RS16885 7a9c6248f261f6ea028e3cdccb2024d6 201 Gene3D G3DSA:3.40.30.10 65 193 8.9E-18 T 29-03-2018 CHH28_RS16885 7a9c6248f261f6ea028e3cdccb2024d6 201 Pfam PF08534 Redoxin 82 185 4.9E-8 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CHH28_RS12515 af173bccc56fbabfd473be3a2f3b00c8 103 Gene3D G3DSA:1.25.40.10 46 103 4.5E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS18640 a7e0ba70932f08a3c609119256c674fe 125 Pfam PF10975 Protein of unknown function (DUF2802) 59 123 2.2E-18 T 29-03-2018 IPR021244 Protein of unknown function DUF2802 CHH28_RS03385 529a193dc4dae83edd169d268e23260e 231 Pfam PF04012 PspA/IM30 family 3 227 5.4E-41 T 29-03-2018 IPR007157 PspA/IM30 CHH28_RS17130 ad5813fa1e92704cb9a75910a6171638 60 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 4.9E-22 T 29-03-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type CHH28_RS17130 ad5813fa1e92704cb9a75910a6171638 60 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 49 4.7E-16 T 29-03-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type CHH28_RS09295 fbacc74330e917d68b21732d2fb78b30 382 Pfam PF12094 Protein of unknown function (DUF3570) 9 355 2.0E-55 T 29-03-2018 IPR021953 Protein of unknown function DUF3570 CHH28_RS01935 bdbfb023a68e649c71471a2e36a79859 1216 Gene3D G3DSA:3.90.1160.10 852 952 8.5E-5 T 29-03-2018 CHH28_RS10575 5b871765fc9f9cabc513416b9c9118d7 695 Gene3D G3DSA:4.10.940.10 540 655 5.4E-18 T 29-03-2018 CHH28_RS02765 f28e75dbbd0eab22c071677999447f3a 94 Pfam PF13586 Transposase DDE domain 6 92 8.1E-12 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS12205 f28e75dbbd0eab22c071677999447f3a 94 Pfam PF13586 Transposase DDE domain 6 92 8.1E-12 T 29-03-2018 IPR025668 Transposase DDE domain CHH28_RS11345 4ab344c3dae91a653229ffb6f13f4e7f 132 PIRSF PIRSF016789 12 132 7.6E-34 T 29-03-2018 IPR007401 Protein of unknown function DUF454 CHH28_RS11345 4ab344c3dae91a653229ffb6f13f4e7f 132 Pfam PF04304 Protein of unknown function (DUF454) 13 128 2.8E-36 T 29-03-2018 IPR007401 Protein of unknown function DUF454 CHH28_RS11980 b633a2442ccb5eda1dca1fb5c2842efb 261 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 36.687 T 29-03-2018 IPR005583 Peroxide stress protein YaaA CHH28_RS11980 b633a2442ccb5eda1dca1fb5c2842efb 261 Pfam PF03883 Peroxide stress protein YaaA 1 243 8.0E-92 T 29-03-2018 IPR005583 Peroxide stress protein YaaA CHH28_RS11610 d476551df24d83b875bc792b5ac66687 394 Gene3D G3DSA:3.40.190.10 4 304 9.7E-5 T 29-03-2018 CHH28_RS12225 e51bbf28af62ffd51e34ffb38941d2a0 1032 Pfam PF13569 Domain of unknown function (DUF4132) 773 925 6.4E-31 T 29-03-2018 IPR025406 Domain of unknown function DUF4132 CHH28_RS12225 e51bbf28af62ffd51e34ffb38941d2a0 1032 Gene3D G3DSA:1.25.40.10 40 555 0.0027 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CHH28_RS06165 ebf84bcde5aebe4f747eb6b645bb2b98 321 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 13 291 5.7E-44 T 29-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CHH28_RS01370 1669f8039cc0b340697045d663c15a47 429 SUPERFAMILY SSF53300 253 418 3.34E-5 T 29-03-2018 IPR002035 von Willebrand factor, type A CHH28_RS01370 1669f8039cc0b340697045d663c15a47 429 Pfam PF04285 Protein of unknown function (DUF444) 4 422 1.1E-176 T 29-03-2018 IPR006698 Uncharacterised protein family UPF0229 CHH28_RS01370 1669f8039cc0b340697045d663c15a47 429 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 425 38.306 T 29-03-2018 IPR006698 Uncharacterised protein family UPF0229 CHH28_RS08510 a56480abb424d91ac98dd02032a399f0 309 Gene3D G3DSA:3.90.182.10 135 255 1.0E-4 T 29-03-2018 CHH28_RS15845 efc8b1146935415c8bb0211353f5c93b 341 Pfam PF13835 Domain of unknown function (DUF4194) 24 200 6.9E-35 T 29-03-2018 IPR025449 Protein of unknown function DUF4194 CHH28_RS00655 e6589b0f5e5b241d939b5c8423caf496 260 Pfam PF04402 Protein of unknown function (DUF541) 56 257 8.1E-37 T 29-03-2018 IPR007497 Protein of unknown function DUF541 CHH28_RS16200 46e805b981f1b5ea53bd027360030f6c 79 Pfam PF11730 Protein of unknown function (DUF3297) 8 78 1.6E-37 T 29-03-2018 IPR021724 Protein of unknown function DUF3297 CHH28_RS11775 057cd7952206887c81dd69874a615221 201 Pfam PF06930 Protein of unknown function (DUF1282) 9 180 7.5E-37 T 29-03-2018 IPR009698 Protein of unknown function DUF1282 CHH28_RS10535 a3549f97f4bd1787027f28d305ca95ab 188 Pfam PF11736 Protein of unknown function (DUF3299) 31 184 1.9E-45 T 29-03-2018 IPR021727 Protein of unknown function DUF3299 CHH28_RS18825 6faf2efef96ac64e8bd1bdf2ef0456a3 357 PRINTS PR01003 Flagellar assembly protein FliH signature 92 114 2.8E-5 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CHH28_RS18825 6faf2efef96ac64e8bd1bdf2ef0456a3 357 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 2.8E-5 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CHH28_RS18825 6faf2efef96ac64e8bd1bdf2ef0456a3 357 PRINTS PR01003 Flagellar assembly protein FliH signature 115 133 2.8E-5 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CHH28_RS18825 6faf2efef96ac64e8bd1bdf2ef0456a3 357 Pfam PF02108 Flagellar assembly protein FliH 130 250 9.0E-16 T 29-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CHH28_RS19305 4d3c6ae5b2d57153fcf5966d72183117 493 Pfam PF09375 Imelysin 58 460 2.0E-69 T 29-03-2018 IPR018976 Peptidase M75, Imelysin CHH28_RS13780 1c8de629114fd2cf22560baeb17f4802 283 SUPERFAMILY SSF53474 16 261 1.82E-25 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS13780 1c8de629114fd2cf22560baeb17f4802 283 Gene3D G3DSA:3.40.50.1820 8 269 1.6E-21 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CHH28_RS13780 1c8de629114fd2cf22560baeb17f4802 283 Pfam PF00561 alpha/beta hydrolase fold 21 252 1.3E-10 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CHH28_RS02655 e6d4778d2337bba39f113b6a452627ca 86 Gene3D G3DSA:3.40.630.30 1 82 5.0E-7 T 29-03-2018 CHH28_RS02655 e6d4778d2337bba39f113b6a452627ca 86 SUPERFAMILY SSF55729 10 79 6.86E-9 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CHH28_RS02435 1456934db4411a085d556766dcc68575 198 Gene3D G3DSA:3.40.50.880 1 185 1.0E-25 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS02435 1456934db4411a085d556766dcc68575 198 Pfam PF01965 DJ-1/PfpI family 7 166 2.3E-23 T 29-03-2018 IPR002818 DJ-1/PfpI CHH28_RS02435 1456934db4411a085d556766dcc68575 198 SUPERFAMILY SSF52317 6 169 1.26E-26 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CHH28_RS19625 3a01afd447e6588e35511d6ca21cda6d 66 Pfam PF10981 Protein of unknown function (DUF2788) 15 64 3.6E-21 T 29-03-2018 IPR021249 Protein of unknown function DUF2788 CHH28_RS04235 ba76af9f6b5c0a45fe83773013dea7e7 70 Pfam PF13783 Domain of unknown function (DUF4177) 5 69 1.1E-9 T 29-03-2018 IPR025234 Protein of unknown function DUF4177 CHH28_RS04760 97b26d59d115a71a1976ca0c8b38b7a8 184 Pfam PF07209 Protein of unknown function (DUF1415) 10 171 1.2E-53 T 29-03-2018 IPR009858 Protein of unknown function DUF1415 CHH28_RS15830 86ee1358cf68a8ce74c22916cf656b73 337 Pfam PF13511 Domain of unknown function (DUF4124) 27 70 2.0E-15 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 CHH28_RS01235 58c63b785f31bda2c8174b63ed987247 216 Pfam PF11008 Protein of unknown function (DUF2846) 15 142 3.1E-28 T 29-03-2018 IPR022548 Domain of unknown function DUF2846 CHH28_RS01385 56caaa0bcac633323351036f4ee8e027 194 Pfam PF02169 LPP20 lipoprotein 62 138 1.1E-10 T 29-03-2018 IPR024952 Lipoprotein LPP20-like CHH28_RS00690 155e3491a4025591776135f9fdc9042d 95 Gene3D G3DSA:3.40.1800.10 4 72 3.1E-6 T 29-03-2018 CHH28_RS04000 7175187905ed8276f68a72dc78b4059c 122 Pfam PF03899 ATP synthase I chain 11 107 8.7E-25 T 29-03-2018 IPR005598 ATP synthase protein I CHH28_RS06805 d6ce5de9a09b2a61ef5090f3bfb2fcf9 205 Pfam PF01794 Ferric reductase like transmembrane component 49 161 2.4E-14 T 29-03-2018 IPR013130 Ferric reductase transmembrane component-like domain CHH28_RS06805 d6ce5de9a09b2a61ef5090f3bfb2fcf9 205 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 1 201 19.714 T 29-03-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 CHH28_RS18320 8828701b21faecd0aefe03c741ee988d 274 Pfam PF08907 Domain of unknown function (DUF1853) 44 267 6.4E-48 T 29-03-2018 IPR015003 Protein of unknown function DUF1853 CHH28_RS05030 41f90e1dcca1e8905a83cc8859bb0d51 236 Gene3D G3DSA:3.40.190.10 2 228 4.6E-7 T 29-03-2018 CHH28_RS16695 f80df9c0e5c53433b8091cd803077ab3 122 Gene3D G3DSA:3.10.180.10 6 120 7.4E-9 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS16695 f80df9c0e5c53433b8091cd803077ab3 122 SUPERFAMILY SSF54593 8 121 2.52E-13 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CHH28_RS08900 a0eac588ddeebbe8c3920cba79c5e143 185 Pfam PF06042 Nucleotidyltransferase 25 182 2.3E-37 T 29-03-2018 IPR009267 Putative nucleotidyltransferase CHH28_RS13915 0afcc4fb649ec3b3370070348fd0f94f 393 Pfam PF05762 VWA domain containing CoxE-like protein 187 275 3.0E-8 T 29-03-2018 IPR008912 Uncharacterised protein family CoxE-like CHH28_RS19585 9846b5896e356a16dceb166d1d5fb4a6 664 Pfam PF04773 FecR protein 58 160 3.6E-11 T 29-03-2018 IPR006860 FecR protein CHH28_RS04560 05117b7d3e46aeec9b8bac76c259b166 788 Pfam PF03170 Bacterial cellulose synthase subunit 60 603 8.5E-64 T 29-03-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 CHH28_RS03325 b6265f9b584585fee491c3502c189705 104 Pfam PF05164 Cell division protein ZapA 9 96 2.9E-21 T 29-03-2018 IPR007838 Cell division protein ZapA-like CHH28_RS03325 b6265f9b584585fee491c3502c189705 104 SUPERFAMILY SSF102829 8 98 7.85E-21 T 29-03-2018 IPR007838 Cell division protein ZapA-like CHH28_RS09960 50a584a86cef744c5cb1edec0d819b02 166 Pfam PF01618 MotA/TolQ/ExbB proton channel family 43 161 4.8E-21 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CHH28_RS05150 24fd0226019dc08c22e42abf65dbf561 73 Pfam PF09905 DNA-binding protein VF530 6 68 2.8E-34 T 29-03-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 CHH28_RS05150 24fd0226019dc08c22e42abf65dbf561 73 Gene3D G3DSA:1.10.720.30 14 70 9.3E-31 T 29-03-2018 IPR003034 SAP domain CHH28_RS08230 f045bb7ab3429ccf1af4c9c3c2e85925 165 Pfam PF11086 Protein of unknown function (DUF2878) 9 150 2.1E-34 T 29-03-2018 IPR021306 Protein of unknown function DUF2878 CHH28_RS01505 6298fb5ea67e584d99d52fa1df4f1649 131 Pfam PF12279 Protein of unknown function (DUF3619) 8 49 1.3E-5 T 29-03-2018 IPR022064 Protein of unknown function DUF3619 CHH28_RS10410 f761a98c72cf39682fbaa97587f13da4 285 Pfam PF01578 Cytochrome C assembly protein 77 281 1.5E-25 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CHH28_RS09635 41bca663e68347afa11f7e63aee89729 87 Pfam PF11391 Protein of unknown function (DUF2798) 1 57 2.7E-19 T 29-03-2018 IPR021529 Protein of unknown function DUF2798 CHH28_RS09155 c94aa904c34bffe6a258c9666a0b2db3 303 Pfam PF00482 Type II secretion system (T2SS), protein F 135 259 1.6E-21 T 29-03-2018 IPR018076 Type II secretion system F domain CHH28_RS09355 06009de5c7e199e9994f743c48639f2c 363 SUPERFAMILY SSF56935 16 363 4.19E-28 T 29-03-2018 CHH28_RS09355 06009de5c7e199e9994f743c48639f2c 363 Gene3D G3DSA:2.40.160.10 1 363 9.6E-32 T 29-03-2018 CHH28_RS15665 85d4310bb8d0960628c99f5bb22a7b87 189 Gene3D G3DSA:1.10.287.500 7 122 4.8E-8 T 29-03-2018 CHH28_RS17930 a5145ac80d8faa777c54a05470e38f01 393 Pfam PF05684 Protein of unknown function (DUF819) 52 389 2.7E-27 T 29-03-2018 IPR008537 Protein of unknown function DUF819 CHH28_RS02920 486f3e7acf0b880386d803c21bedd7bf 410 Pfam PF12704 MacB-like periplasmic core domain 20 243 6.2E-15 T 29-03-2018 IPR025857 MacB-like periplasmic core domain CHH28_RS02920 486f3e7acf0b880386d803c21bedd7bf 410 Pfam PF02687 FtsX-like permease family 303 401 5.8E-10 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CHH28_RS06885 cc52b94c47a13ac05cd2944f3a48eece 224 Pfam PF04298 Putative neutral zinc metallopeptidase 4 221 9.3E-64 T 29-03-2018 IPR007395 Putative neutral zinc metallopeptidase CHH28_RS06170 18b6574924902d70c0a2a4596468f613 249 Pfam PF16811 TRAP transporter T-component 4 248 1.0E-74 T 29-03-2018 IPR031823 TRAP transporter T-component CHH28_RS07620 5c774a649c6af5c222408d574c3ce589 194 Pfam PF01810 LysE type translocator 13 187 4.0E-22 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS04875 5bf0b05073a9f07d3e1d53b038a6954d 87 Pfam PF09526 Probable metal-binding protein (DUF2387) 1 65 1.9E-23 T 29-03-2018 IPR012658 Conserved hypothetical protein CHP02443 CHH28_RS04875 5bf0b05073a9f07d3e1d53b038a6954d 87 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 50 7.5E-17 T 29-03-2018 IPR012658 Conserved hypothetical protein CHP02443 CHH28_RS11630 8e34a2190385ec1a3608b09b3e918dd5 173 Pfam PF01618 MotA/TolQ/ExbB proton channel family 47 166 6.6E-22 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CHH28_RS03710 eb5132782ac86d0328e24de914102a0c 341 Gene3D G3DSA:1.25.10.10 13 322 2.7E-5 T 29-03-2018 IPR011989 Armadillo-like helical CHH28_RS08195 c0df0f3d4fa93173ec9b9fd29199e345 131 Pfam PF13781 DoxX-like family 15 113 9.8E-28 T 29-03-2018 IPR025695 DoxX-like family CHH28_RS13180 83cc2e51f421f6dfd1679bd62b0ff7c9 340 Pfam PF02628 Cytochrome oxidase assembly protein 13 315 1.4E-68 T 29-03-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 CHH28_RS15905 650bf2c79b8620ec930358943ad59973 396 Pfam PF03773 Predicted permease 99 392 2.7E-29 T 29-03-2018 IPR005524 Predicted permease DUF318 CHH28_RS10150 fbdaf3270ce4b334b15c89bbbdbdf1cf 565 Pfam PF13687 Domain of unknown function (DUF4153) 159 389 1.4E-20 T 29-03-2018 IPR025291 Protein of unknown function DUF4153 CHH28_RS07110 2b4148541d265c6456c5fdf123a5d1fa 54 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 15 54 8.0E-11 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS12730 d83c0defe2fc660bac60514c36fe8bb5 313 SUPERFAMILY SSF52540 57 308 1.72E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CHH28_RS12730 d83c0defe2fc660bac60514c36fe8bb5 313 Gene3D G3DSA:3.40.50.300 33 311 3.8E-46 T 29-03-2018 CHH28_RS04225 c262538a9c4191c643043435b839bd73 83 Gene3D G3DSA:3.30.1390.10 4 62 3.7E-8 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CHH28_RS03940 17465ac5e18a3920999a1dbcb57ddbc9 275 Pfam PF06629 MltA-interacting protein MipA 60 275 1.4E-25 T 29-03-2018 IPR010583 MltA-interacting MipA CHH28_RS18230 9c1652d05a7f62c0c5023d160b1e067a 194 Pfam PF01810 LysE type translocator 17 187 3.4E-15 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS09125 61bb4156846f45d7c0a7f10b6a5f388b 62 Pfam PF04964 Flp/Fap pilin component 11 56 7.2E-10 T 29-03-2018 IPR007047 Flp/Fap pilin component CHH28_RS13850 29362b0f043e70c03decfea099b364b4 92 Gene3D G3DSA:1.10.1220.10 49 88 1.3E-7 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CHH28_RS13850 29362b0f043e70c03decfea099b364b4 92 Pfam PF01402 Ribbon-helix-helix protein, copG family 51 87 1.4E-5 T 29-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 CHH28_RS12215 067d6bd9f3ab75fd91f9b6f9db41aa0b 41 Pfam PF14294 Domain of unknown function (DUF4372) 1 31 1.9E-10 T 29-03-2018 IPR025399 Domain of unknown function DUF4372 CHH28_RS17775 a71486fa30efe26c82b373ac95cc6030 131 TIGRFAM TIGR02809 phasin_3: phasin family protein 5 107 8.9E-30 T 29-03-2018 IPR014176 Phasin, subfamily 3 CHH28_RS17775 a71486fa30efe26c82b373ac95cc6030 131 Pfam PF09361 Phasin protein 8 107 2.1E-17 T 29-03-2018 IPR018968 Phasin CHH28_RS08735 2d4d8170b57f3a3199ff4a5682d16848 103 Pfam PF04977 Septum formation initiator 21 98 7.2E-19 T 29-03-2018 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 CHH28_RS08735 2d4d8170b57f3a3199ff4a5682d16848 103 Hamap MF_00599 Cell division protein FtsB [ftsB]. 9 100 21.618 T 29-03-2018 IPR023081 Cell division protein FtsB CHH28_RS17165 ecf6e5e518072c0ab6fc2b911ee79a41 89 Pfam PF09656 Putative transmembrane protein (PGPGW) 6 55 7.5E-5 T 29-03-2018 IPR019099 Uncharacterised protein family PGPGW, transmembrane CHH28_RS17380 b74148578d38d302bd21bd851f854ba3 63 Pfam PF09926 Uncharacterized small protein (DUF2158) 6 47 3.3E-12 T 29-03-2018 IPR019226 Protein of unknown function DUF2158 CHH28_RS04055 7698a1e2a51bda326d70c59cd64923e4 297 Gene3D G3DSA:3.40.190.10 4 286 9.0E-7 T 29-03-2018 CHH28_RS09590 21ce3ce08919ccb4f4141a606861862d 278 Pfam PF16074 Type IV Pilus-assembly protein W 142 274 1.8E-19 T 29-03-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 CHH28_RS03405 50d08bfaa8546042c29c7020452011d2 205 Pfam PF06693 Protein of unknown function (DUF1190) 43 195 1.3E-32 T 29-03-2018 IPR009576 Biofilm formation YgiB CHH28_RS14685 bee02bad248e666de11799a1786d0d95 413 Gene3D G3DSA:1.20.1260.10 23 163 5.4E-4 T 29-03-2018 IPR012347 Ferritin-related CHH28_RS14685 bee02bad248e666de11799a1786d0d95 413 Pfam PF12902 Ferritin-like 33 261 1.8E-32 T 29-03-2018 CHH28_RS08765 b94af5f4b33af506e6fe1022fb9a4af9 319 Pfam PF04018 Domain of unknown function (DUF368) 13 256 3.3E-90 T 29-03-2018 IPR007163 Protein of unknown function DUF368 CHH28_RS12165 1f23861fd84a916184d46cbe259e962d 158 Pfam PF10675 Protein of unknown function (DUF2489) 13 146 1.1E-33 T 29-03-2018 IPR019617 Domain of unknown function DUF2489 CHH28_RS07435 11e9b33a9ae78916266704d2682d62bd 239 Gene3D G3DSA:3.40.190.10 1 235 5.7E-6 T 29-03-2018 CHH28_RS15150 ae93ea530af0061399ee93b996ae67a5 154 Pfam PF06271 RDD family 9 141 4.2E-21 T 29-03-2018 IPR010432 RDD CHH28_RS17335 061f81fc6a72728572f5963540cc9363 68 Gene3D G3DSA:3.30.70.1290 4 68 3.7E-4 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CHH28_RS16865 3444bc7779bd6fe873968704917549b1 665 Pfam PF02120 Flagellar hook-length control protein FliK 575 649 5.3E-16 T 29-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal CHH28_RS04295 c87e23c34a2fc021a9d6407bfa65640f 529 Pfam PF03929 PepSY-associated TM region 13 374 2.9E-57 T 29-03-2018 IPR005625 PepSY-associated TM protein CHH28_RS01250 766fc0bb982866fed9c24b45c1631b00 266 SUPERFAMILY SSF56645 36 158 1.04E-7 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CHH28_RS05635 7ee3b8af9fb783d8af373f676beeaf81 307 Pfam PF13115 YtkA-like 214 289 1.6E-9 T 29-03-2018 IPR032693 YtkA-like domain CHH28_RS17445 4b806217639ba5e1e05eec8dbb2abdcf 428 ProDom PD140749 ORF PHAGE PA0727 15 385 1.0E-54 T 29-03-2018 CHH28_RS18095 de7e770fdbe5eb35355eda4a6562b0d0 244 Pfam PF01925 Sulfite exporter TauE/SafE 16 234 5.4E-20 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CHH28_RS15380 a41289607caceb52b6e2a076a55c6d6e 157 Pfam PF11220 Protein of unknown function (DUF3015) 20 156 6.2E-46 T 29-03-2018 IPR021383 Protein of unknown function DUF3015 CHH28_RS04180 74acbe08e7d914b94b3d70f57dd415de 196 Pfam PF01810 LysE type translocator 14 188 8.6E-14 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CHH28_RS10635 3bc84242e399af6c144278715e29d894 246 Pfam PF07070 SpoOM protein 2 217 1.4E-62 T 29-03-2018 IPR009776 Sporulation stage 0, protein M CHH28_RS11405 1b70ef71c4f6cba79046f1bd15ddc7d5 432 Pfam PF00999 Sodium/hydrogen exchanger family 5 390 1.3E-45 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CHH28_RS09595 f24808c186f9a1e914d05fd861c688d5 172 Gene3D G3DSA:3.30.700.10 9 167 0.0014 T 29-03-2018 CHH28_RS02025 0cb51e0fc849e8e9cf25e15c90d98a7a 655 Pfam PF02690 Na+/Pi-cotransporter 246 321 1.3E-11 T 29-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CHH28_RS02025 0cb51e0fc849e8e9cf25e15c90d98a7a 655 Pfam PF02690 Na+/Pi-cotransporter 86 225 3.7E-36 T 29-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CHH28_RS03445 a6fc2b00b44660fa5a421efae7e1d5f8 231 Pfam PF04172 LrgB-like family 15 228 7.6E-64 T 29-03-2018 IPR007300 CidB/LrgB family CHH28_RS10805 2d784a780eac37d45faea9b929f3aa73 161 Gene3D G3DSA:1.20.5.340 46 157 2.5E-7 T 29-03-2018 CHH28_RS08870 7622ba946f3e16cfd9d50205cdaaa44e 127 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 80 3.0E-24 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family CHH28_RS09730 d2b38bf4966b27034c8ca485db1d1457 231 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 64 180 2.9E-19 T 29-03-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted CHH28_RS08415 6c14f12cb5bb26daa8d965fb73ced814 230 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 23 221 2.8E-20 T 29-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CHH28_RS07760 943c72dc9d4598a6cb5f74e93d06072b 641 Pfam PF06980 Protein of unknown function (DUF1302) 29 641 3.9E-193 T 29-03-2018 IPR010727 Protein of unknown function DUF1302 CHH28_RS11990 d777c96b615639c50f7b180fb558bd1a 264 Pfam PF10972 Peptidoglycan-binding protein, CsiV 6 251 5.1E-29 T 29-03-2018 IPR021241 Peptidoglycan-binding protein, CsiV CHH28_RS12065 7ef280c8bffc5192fbaad5955cb780d1 250 Pfam PF04654 Protein of unknown function, DUF599 5 214 1.9E-56 T 29-03-2018 IPR006747 Protein of unknown function DUF599