locus-tag class description KFF03_RS00005 PF00308 Bacterial dnaA protein KFF03_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix KFF03_RS00005 PF11638 DnaA N-terminal domain KFF03_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KFF03_RS00010 PF02767 DNA polymerase III beta subunit, central domain KFF03_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KFF03_RS00015 PF02463 RecF/RecN/SMC N terminal domain KFF03_RS00020 PF00204 DNA gyrase B KFF03_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus KFF03_RS00020 PF18053 DNA gyrase B subunit insert domain KFF03_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS00020 PF01751 Toprim domain KFF03_RS00035 PF03553 Na+/H+ antiporter family KFF03_RS00035 PF13726 Na+-H+ antiporter family KFF03_RS00040 PF00561 alpha/beta hydrolase fold KFF03_RS00045 PF03280 Proteobacterial lipase chaperone protein KFF03_RS00080 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KFF03_RS00080 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KFF03_RS00080 PF00378 Enoyl-CoA hydratase/isomerase KFF03_RS00090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS00090 PF03466 LysR substrate binding domain KFF03_RS00100 PF00850 Histone deacetylase domain KFF03_RS00120 PF14698 Argininosuccinate lyase C-terminal KFF03_RS00120 PF00206 Lyase KFF03_RS00125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS00125 PF07694 5TMR of 5TMR-LYT KFF03_RS00125 PF06580 Histidine kinase KFF03_RS00130 PF04397 LytTr DNA-binding domain KFF03_RS00130 PF00072 Response regulator receiver domain KFF03_RS00135 PF00860 Permease family KFF03_RS00145 PF01709 Transcriptional regulator KFF03_RS00155 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH KFF03_RS00160 PF00132 Bacterial transferase hexapeptide (six repeats) KFF03_RS00165 PF01432 Peptidase family M3 KFF03_RS00190 PF01244 Membrane dipeptidase (Peptidase family M19) KFF03_RS00195 PF04264 YceI-like domain KFF03_RS00200 PF01292 Prokaryotic cytochrome b561 KFF03_RS00215 PF01554 MatE KFF03_RS00220 PF02630 SCO1/SenC KFF03_RS00225 PF00950 ABC 3 transport family KFF03_RS00230 PF00005 ABC transporter KFF03_RS00235 PF01475 Ferric uptake regulator family KFF03_RS00240 PF01297 Zinc-uptake complex component A periplasmic KFF03_RS00245 PF12867 DinB superfamily KFF03_RS00245 PF03781 Sulfatase-modifying factor enzyme 1 KFF03_RS00250 PF10017 Histidine-specific methyltransferase, SAM-dependent KFF03_RS00260 PF00132 Bacterial transferase hexapeptide (six repeats) KFF03_RS00260 PF12804 MobA-like NTP transferase domain KFF03_RS00275 PF00563 EAL domain KFF03_RS00275 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS00275 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS00295 PF01435 Peptidase family M48 KFF03_RS00315 PF07715 TonB-dependent Receptor Plug Domain KFF03_RS00315 PF00593 TonB dependent receptor KFF03_RS00370 PF00583 Acetyltransferase (GNAT) family KFF03_RS00370 PF00696 Amino acid kinase family KFF03_RS00375 PF07687 Peptidase dimerisation domain KFF03_RS00375 PF01546 Peptidase family M20/M25/M40 KFF03_RS00385 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KFF03_RS00385 PF00437 Type II/IV secretion system protein KFF03_RS00405 PF00089 Trypsin KFF03_RS00420 PF00902 Sec-independent protein translocase protein (TatC) KFF03_RS00425 PF02416 mttA/Hcf106 family KFF03_RS00430 PF02416 mttA/Hcf106 family KFF03_RS00435 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KFF03_RS00440 PF01502 Phosphoribosyl-AMP cyclohydrolase KFF03_RS00455 PF03109 ABC1 family KFF03_RS00465 PF01209 ubiE/COQ5 methyltransferase family KFF03_RS00475 PF02321 Outer membrane efflux protein KFF03_RS00480 PF00293 NUDIX domain KFF03_RS00490 PF00149 Calcineurin-like phosphoesterase KFF03_RS00495 PF05728 Uncharacterised protein family (UPF0227) KFF03_RS00500 PF00563 EAL domain KFF03_RS00500 PF00360 Phytochrome region KFF03_RS00500 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS00500 PF01590 GAF domain KFF03_RS00505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS00505 PF00204 DNA gyrase B KFF03_RS00505 PF00986 DNA gyrase B subunit, carboxyl terminus KFF03_RS00505 PF01751 Toprim domain KFF03_RS00510 PF00563 EAL domain KFF03_RS00510 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS00510 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS00520 PF00521 DNA gyrase/topoisomerase IV, subunit A KFF03_RS00520 PF03989 DNA gyrase C-terminal domain, beta-propeller KFF03_RS00525 PF00561 alpha/beta hydrolase fold KFF03_RS00540 PF00448 SRP54-type protein, GTPase domain KFF03_RS00540 PF02881 SRP54-type protein, helical bundle domain KFF03_RS00545 PF00005 ABC transporter KFF03_RS00550 PF18075 FtsX extracellular domain KFF03_RS00555 PF04542 Sigma-70 region 2 KFF03_RS00555 PF00140 Sigma-70 factor, region 1.2 KFF03_RS00555 PF04545 Sigma-70, region 4 KFF03_RS00560 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS00560 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS00560 PF00563 EAL domain KFF03_RS00565 PF01370 NAD dependent epimerase/dehydratase family KFF03_RS00570 PF00294 pfkB family carbohydrate kinase KFF03_RS00570 PF01467 Cytidylyltransferase-like KFF03_RS00575 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KFF03_RS00655 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KFF03_RS00660 PF00291 Pyridoxal-phosphate dependent enzyme KFF03_RS00660 PF00585 C-terminal regulatory domain of Threonine dehydratase KFF03_RS00665 PF01553 Acyltransferase KFF03_RS00675 PF03466 LysR substrate binding domain KFF03_RS00675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS00695 PF00561 alpha/beta hydrolase fold KFF03_RS00700 PF07021 Methionine biosynthesis protein MetW KFF03_RS00700 PF00561 alpha/beta hydrolase fold KFF03_RS00710 PF01725 Ham1 family KFF03_RS00720 PF06969 HemN C-terminal domain KFF03_RS00720 PF04055 Radical SAM superfamily KFF03_RS00730 PF00294 pfkB family carbohydrate kinase KFF03_RS00745 PF00593 TonB dependent receptor KFF03_RS00745 PF07715 TonB-dependent Receptor Plug Domain KFF03_RS00750 PF03099 Biotin/lipoate A/B protein ligase family KFF03_RS00750 PF08279 HTH domain KFF03_RS00750 PF02237 Biotin protein ligase C terminal domain KFF03_RS00755 PF03309 Type III pantothenate kinase KFF03_RS00780 PF00009 Elongation factor Tu GTP binding domain KFF03_RS00780 PF03144 Elongation factor Tu domain 2 KFF03_RS00780 PF03143 Elongation factor Tu C-terminal domain KFF03_RS00790 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KFF03_RS00795 PF00467 KOW motif KFF03_RS00795 PF02357 Transcription termination factor nusG KFF03_RS00800 PF00298 Ribosomal protein L11, RNA binding domain KFF03_RS00800 PF03946 Ribosomal protein L11, N-terminal domain KFF03_RS00805 PF00687 Ribosomal protein L1p/L10e family KFF03_RS00810 PF00466 Ribosomal protein L10 KFF03_RS00815 PF16320 Ribosomal protein L7/L12 dimerisation domain KFF03_RS00815 PF00542 Ribosomal protein L7/L12 C-terminal domain KFF03_RS00820 PF04565 RNA polymerase Rpb2, domain 3 KFF03_RS00820 PF04561 RNA polymerase Rpb2, domain 2 KFF03_RS00820 PF04563 RNA polymerase beta subunit KFF03_RS00820 PF04560 RNA polymerase Rpb2, domain 7 KFF03_RS00820 PF00562 RNA polymerase Rpb2, domain 6 KFF03_RS00820 PF10385 RNA polymerase beta subunit external 1 domain KFF03_RS00825 PF04998 RNA polymerase Rpb1, domain 5 KFF03_RS00825 PF05000 RNA polymerase Rpb1, domain 4 KFF03_RS00825 PF04983 RNA polymerase Rpb1, domain 3 KFF03_RS00825 PF00623 RNA polymerase Rpb1, domain 2 KFF03_RS00825 PF04997 RNA polymerase Rpb1, domain 1 KFF03_RS00830 PF00164 Ribosomal protein S12/S23 KFF03_RS00835 PF00177 Ribosomal protein S7p/S5e KFF03_RS00840 PF14492 Elongation Factor G, domain II KFF03_RS00840 PF03764 Elongation factor G, domain IV KFF03_RS00840 PF00009 Elongation factor Tu GTP binding domain KFF03_RS00840 PF03144 Elongation factor Tu domain 2 KFF03_RS00840 PF00679 Elongation factor G C-terminus KFF03_RS00845 PF03144 Elongation factor Tu domain 2 KFF03_RS00845 PF00009 Elongation factor Tu GTP binding domain KFF03_RS00845 PF03143 Elongation factor Tu C-terminal domain KFF03_RS00850 PF00338 Ribosomal protein S10p/S20e KFF03_RS00855 PF00297 Ribosomal protein L3 KFF03_RS00860 PF00573 Ribosomal protein L4/L1 family KFF03_RS00865 PF00276 Ribosomal protein L23 KFF03_RS00870 PF03947 Ribosomal Proteins L2, C-terminal domain KFF03_RS00870 PF00181 Ribosomal Proteins L2, RNA binding domain KFF03_RS00875 PF00203 Ribosomal protein S19 KFF03_RS00880 PF00237 Ribosomal protein L22p/L17e KFF03_RS00885 PF07650 KH domain KFF03_RS00885 PF00189 Ribosomal protein S3, C-terminal domain KFF03_RS00890 PF00252 Ribosomal protein L16p/L10e KFF03_RS00895 PF00831 Ribosomal L29 protein KFF03_RS00900 PF00366 Ribosomal protein S17 KFF03_RS00905 PF00238 Ribosomal protein L14p/L23e KFF03_RS00910 PF00467 KOW motif KFF03_RS00910 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KFF03_RS00915 PF00281 Ribosomal protein L5 KFF03_RS00915 PF00673 ribosomal L5P family C-terminus KFF03_RS00920 PF00253 Ribosomal protein S14p/S29e KFF03_RS00925 PF00410 Ribosomal protein S8 KFF03_RS00930 PF00347 Ribosomal protein L6 KFF03_RS00935 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KFF03_RS00940 PF00333 Ribosomal protein S5, N-terminal domain KFF03_RS00940 PF03719 Ribosomal protein S5, C-terminal domain KFF03_RS00945 PF00327 Ribosomal protein L30p/L7e KFF03_RS00950 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KFF03_RS00955 PF00344 SecY translocase KFF03_RS00960 PF00444 Ribosomal protein L36 KFF03_RS00965 PF00416 Ribosomal protein S13/S18 KFF03_RS00970 PF00411 Ribosomal protein S11 KFF03_RS00975 PF00163 Ribosomal protein S4/S9 N-terminal domain KFF03_RS00975 PF01479 S4 domain KFF03_RS00980 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KFF03_RS00980 PF01000 RNA polymerase Rpb3/RpoA insert domain KFF03_RS00980 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KFF03_RS00985 PF01196 Ribosomal protein L17 KFF03_RS00990 PF07859 alpha/beta hydrolase fold KFF03_RS00995 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KFF03_RS01005 PF03480 Bacterial extracellular solute-binding protein, family 7 KFF03_RS01015 PF00563 EAL domain KFF03_RS01015 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS01015 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS01015 PF13188 PAS domain KFF03_RS01020 PF00158 Sigma-54 interaction domain KFF03_RS01020 PF06490 Flagellar regulatory protein FleQ KFF03_RS01020 PF02954 Bacterial regulatory protein, Fis family KFF03_RS01030 PF01654 Cytochrome bd terminal oxidase subunit I KFF03_RS01035 PF02322 Cytochrome bd terminal oxidase subunit II KFF03_RS01040 PF08173 Membrane bound YbgT-like protein KFF03_RS01050 PF00581 Rhodanese-like domain KFF03_RS01065 PF07885 Ion channel KFF03_RS01065 PF02254 TrkA-N domain KFF03_RS01080 PF00478 IMP dehydrogenase / GMP reductase domain KFF03_RS01080 PF00571 CBS domain KFF03_RS01090 PF01208 Uroporphyrinogen decarboxylase (URO-D) KFF03_RS01095 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KFF03_RS01095 PF00361 Proton-conducting membrane transporter KFF03_RS01095 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KFF03_RS01095 PF13244 Domain of unknown function (DUF4040) KFF03_RS01100 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KFF03_RS01105 PF00361 Proton-conducting membrane transporter KFF03_RS01110 PF01899 Na+/H+ ion antiporter subunit KFF03_RS01115 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KFF03_RS01120 PF03334 Na+/H+ antiporter subunit KFF03_RS01140 PF02678 Pirin KFF03_RS01140 PF17954 Quercetinase C-terminal cupin domain KFF03_RS01145 PF03466 LysR substrate binding domain KFF03_RS01145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS01150 PF03710 Glutamate-ammonia ligase adenylyltransferase KFF03_RS01150 PF08335 GlnD PII-uridylyltransferase KFF03_RS01155 PF14814 Bifunctional transglycosylase second domain KFF03_RS01155 PF00905 Penicillin binding protein transpeptidase domain KFF03_RS01155 PF00912 Transglycosylase KFF03_RS01170 PF00672 HAMP domain KFF03_RS01170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS01180 PF00202 Aminotransferase class-III KFF03_RS01185 PF03653 Uncharacterised protein family (UPF0093) KFF03_RS01190 PF00654 Voltage gated chloride channel KFF03_RS01195 PF02774 Semialdehyde dehydrogenase, dimerisation domain KFF03_RS01195 PF01118 Semialdehyde dehydrogenase, NAD binding domain KFF03_RS01210 PF01521 Iron-sulphur cluster biosynthesis KFF03_RS01220 PF03702 Anhydro-N-acetylmuramic acid kinase KFF03_RS01225 PF01551 Peptidase family M23 KFF03_RS01225 PF04225 Opacity-associated protein A LysM-like domain KFF03_RS01230 PF00579 tRNA synthetases class I (W and Y) KFF03_RS01265 PF00005 ABC transporter KFF03_RS01295 PF00884 Sulfatase KFF03_RS01300 PF01757 Acyltransferase family KFF03_RS01320 PF00535 Glycosyl transferase family 2 KFF03_RS01345 PF01131 DNA topoisomerase KFF03_RS01345 PF01751 Toprim domain KFF03_RS01350 PF02325 YGGT family KFF03_RS01355 PF14748 Pyrroline-5-carboxylate reductase dimerisation KFF03_RS01355 PF03807 NADP oxidoreductase coenzyme F420-dependent KFF03_RS01360 PF01168 Alanine racemase, N-terminal domain KFF03_RS01365 PF00437 Type II/IV secretion system protein KFF03_RS01370 PF00437 Type II/IV secretion system protein KFF03_RS01375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF03_RS01375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF03_RS01375 PF02770 Acyl-CoA dehydrogenase, middle domain KFF03_RS01405 PF00082 Subtilase family KFF03_RS01405 PF01483 Proprotein convertase P-domain KFF03_RS01410 PF01078 Magnesium chelatase, subunit ChlI KFF03_RS01410 PF13335 Magnesium chelatase, subunit ChlI C-terminal KFF03_RS01415 PF00563 EAL domain KFF03_RS01415 PF01590 GAF domain KFF03_RS01415 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS01415 PF00360 Phytochrome region KFF03_RS01420 PF13361 UvrD-like helicase C-terminal domain KFF03_RS01420 PF00580 UvrD/REP helicase N-terminal domain KFF03_RS01425 PF04452 RNA methyltransferase KFF03_RS01435 PF00691 OmpA family KFF03_RS01435 PF13677 Membrane MotB of proton-channel complex MotA/MotB KFF03_RS01440 PF01618 MotA/TolQ/ExbB proton channel family KFF03_RS01445 PF02609 Exonuclease VII small subunit KFF03_RS01450 PF00348 Polyprenyl synthetase KFF03_RS01455 PF02779 Transketolase, pyrimidine binding domain KFF03_RS01455 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KFF03_RS01455 PF02780 Transketolase, C-terminal domain KFF03_RS01460 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS01460 PF00497 Bacterial extracellular solute-binding proteins, family 3 KFF03_RS01460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS01465 PF00158 Sigma-54 interaction domain KFF03_RS01465 PF00072 Response regulator receiver domain KFF03_RS01465 PF02954 Bacterial regulatory protein, Fis family KFF03_RS01470 PF00925 GTP cyclohydrolase II KFF03_RS01475 PF04298 Putative neutral zinc metallopeptidase KFF03_RS01490 PF00528 Binding-protein-dependent transport system inner membrane component KFF03_RS01495 PF00528 Binding-protein-dependent transport system inner membrane component KFF03_RS01500 PF00005 ABC transporter KFF03_RS01505 PF01895 PhoU domain KFF03_RS01515 PF00106 short chain dehydrogenase KFF03_RS01520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS01520 PF03466 LysR substrate binding domain KFF03_RS01530 PF04751 Protein of unknown function (DUF615) KFF03_RS01535 PF00571 CBS domain KFF03_RS01535 PF01769 Divalent cation transporter KFF03_RS01535 PF03448 MgtE intracellular N domain KFF03_RS01540 PF00381 PTS HPr component phosphorylation site KFF03_RS01545 PF03668 P-loop ATPase protein family KFF03_RS01550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KFF03_RS01555 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KFF03_RS01560 PF04552 Sigma-54, DNA binding domain KFF03_RS01560 PF04963 Sigma-54 factor, core binding domain KFF03_RS01560 PF00309 Sigma-54 factor, Activator interacting domain (AID) KFF03_RS01565 PF00005 ABC transporter KFF03_RS01565 PF12399 Branched-chain amino acid ATP-binding cassette transporter KFF03_RS01570 PF03968 OstA-like protein KFF03_RS01580 PF00571 CBS domain KFF03_RS01580 PF01380 SIS domain KFF03_RS01585 PF01699 Sodium/calcium exchanger protein KFF03_RS01590 PF00005 ABC transporter KFF03_RS01595 PF02405 Permease MlaE KFF03_RS01600 PF02470 MlaD protein KFF03_RS01610 PF01722 BolA-like protein KFF03_RS01615 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KFF03_RS01620 PF01634 ATP phosphoribosyltransferase KFF03_RS01625 PF00815 Histidinol dehydrogenase KFF03_RS01630 PF00155 Aminotransferase class I and II KFF03_RS01640 PF13180 PDZ domain KFF03_RS01645 PF01784 NIF3 (NGG1p interacting factor 3) KFF03_RS01665 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KFF03_RS01670 PF00111 2Fe-2S iron-sulfur cluster binding domain KFF03_RS01670 PF01799 [2Fe-2S] binding domain KFF03_RS01675 PF01693 Caulimovirus viroplasmin KFF03_RS01705 PF00270 DEAD/DEAH box helicase KFF03_RS01705 PF00271 Helicase conserved C-terminal domain KFF03_RS01705 PF17191 RecG wedge domain KFF03_RS01710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS01710 PF03466 LysR substrate binding domain KFF03_RS01720 PF04023 FeoA domain KFF03_RS01725 PF02421 Ferrous iron transport protein B KFF03_RS01725 PF07670 Nucleoside recognition KFF03_RS01725 PF07664 Ferrous iron transport protein B C terminus KFF03_RS01745 PF00753 Metallo-beta-lactamase superfamily KFF03_RS01765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KFF03_RS01770 PF00227 Proteasome subunit KFF03_RS01775 PF00004 ATPase family associated with various cellular activities (AAA) KFF03_RS01775 PF07724 AAA domain (Cdc48 subfamily) KFF03_RS01780 PF00672 HAMP domain KFF03_RS01780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS01780 PF17200 Single Cache domain 2 KFF03_RS01785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS01785 PF17200 Single Cache domain 2 KFF03_RS01785 PF00672 HAMP domain KFF03_RS01795 PF17876 Cold shock domain KFF03_RS01795 PF08461 Ribonuclease R winged-helix domain KFF03_RS01795 PF08206 Ribonuclease B OB domain KFF03_RS01795 PF00773 RNB domain KFF03_RS01795 PF00575 S1 RNA binding domain KFF03_RS01800 PF00588 SpoU rRNA Methylase family KFF03_RS01800 PF08032 RNA 2'-O ribose methyltransferase substrate binding KFF03_RS01820 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KFF03_RS01820 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KFF03_RS01825 PF01810 LysE type translocator KFF03_RS01830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS01830 PF03466 LysR substrate binding domain KFF03_RS01845 PF07044 Protein of unknown function (DUF1329) KFF03_RS01850 PF00924 Mechanosensitive ion channel KFF03_RS01855 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KFF03_RS01860 PF00106 short chain dehydrogenase KFF03_RS01870 PF12706 Beta-lactamase superfamily domain KFF03_RS01875 PF10417 C-terminal domain of 1-Cys peroxiredoxin KFF03_RS01875 PF00578 AhpC/TSA family KFF03_RS01880 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF03_RS01880 PF13192 Thioredoxin domain KFF03_RS01925 PF03466 LysR substrate binding domain KFF03_RS01925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS01935 PF00484 Carbonic anhydrase KFF03_RS01945 PF03458 UPF0126 domain KFF03_RS01950 PF00883 Cytosol aminopeptidase family, catalytic domain KFF03_RS01950 PF02789 Cytosol aminopeptidase family, N-terminal domain KFF03_RS01960 PF03150 Di-haem cytochrome c peroxidase KFF03_RS01975 PF16655 PhoD-like phosphatase, N-terminal domain KFF03_RS01975 PF09423 PhoD-like phosphatase KFF03_RS01980 PF01551 Peptidase family M23 KFF03_RS01985 PF07715 TonB-dependent Receptor Plug Domain KFF03_RS01985 PF00593 TonB dependent receptor KFF03_RS02000 PF02492 CobW/HypB/UreG, nucleotide-binding domain KFF03_RS02000 PF07683 Cobalamin synthesis protein cobW C-terminal domain KFF03_RS02005 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KFF03_RS02005 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KFF03_RS02020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS02020 PF03466 LysR substrate binding domain KFF03_RS02025 PF01066 CDP-alcohol phosphatidyltransferase KFF03_RS02030 PF00174 Oxidoreductase molybdopterin binding domain KFF03_RS02035 PF01794 Ferric reductase like transmembrane component KFF03_RS02075 PF00682 HMGL-like KFF03_RS02075 PF08502 LeuA allosteric (dimerisation) domain KFF03_RS02085 PF00583 Acetyltransferase (GNAT) family KFF03_RS02095 PF02954 Bacterial regulatory protein, Fis family KFF03_RS02095 PF00072 Response regulator receiver domain KFF03_RS02105 PF01235 Sodium:alanine symporter family KFF03_RS02110 PF00009 Elongation factor Tu GTP binding domain KFF03_RS02110 PF16658 Class II release factor RF3, C-terminal domain KFF03_RS02120 PF00572 Ribosomal protein L13 KFF03_RS02125 PF00380 Ribosomal protein S9/S16 KFF03_RS02130 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal KFF03_RS02130 PF00355 Rieske [2Fe-2S] domain KFF03_RS02135 PF00032 Cytochrome b(C-terminal)/b6/petD KFF03_RS02135 PF00033 Cytochrome b/b6/petB KFF03_RS02140 PF02167 Cytochrome C1 family KFF03_RS02145 PF00043 Glutathione S-transferase, C-terminal domain KFF03_RS02145 PF02798 Glutathione S-transferase, N-terminal domain KFF03_RS02150 PF04386 Stringent starvation protein B KFF03_RS02155 PF00440 Bacterial regulatory proteins, tetR family KFF03_RS02160 PF00696 Amino acid kinase family KFF03_RS02165 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KFF03_RS02165 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KFF03_RS02165 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KFF03_RS02165 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KFF03_RS02170 PF00692 dUTPase KFF03_RS02175 PF02441 Flavoprotein KFF03_RS02175 PF04127 DNA / pantothenate metabolism flavoprotein KFF03_RS02180 PF04002 RadC-like JAB domain KFF03_RS02185 PF00830 Ribosomal L28 family KFF03_RS02190 PF00471 Ribosomal protein L33 KFF03_RS02195 PF06827 Zinc finger found in FPG and IleRS KFF03_RS02195 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KFF03_RS02195 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KFF03_RS02210 PF00037 4Fe-4S binding domain KFF03_RS02215 PF01467 Cytidylyltransferase-like KFF03_RS02220 PF00072 Response regulator receiver domain KFF03_RS02220 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS02225 PF01230 HIT domain KFF03_RS02230 PF00005 ABC transporter KFF03_RS02240 PF00440 Bacterial regulatory proteins, tetR family KFF03_RS02240 PF13977 BetI-type transcriptional repressor, C-terminal KFF03_RS02245 PF00171 Aldehyde dehydrogenase family KFF03_RS02250 PF05199 GMC oxidoreductase KFF03_RS02250 PF00732 GMC oxidoreductase KFF03_RS02255 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KFF03_RS02260 PF00528 Binding-protein-dependent transport system inner membrane component KFF03_RS02265 PF00005 ABC transporter KFF03_RS02265 PF00571 CBS domain KFF03_RS02275 PF01047 MarR family KFF03_RS02280 PF00501 AMP-binding enzyme KFF03_RS02280 PF13193 AMP-binding enzyme C-terminal domain KFF03_RS02290 PF08362 YcdC-like protein, C-terminal region KFF03_RS02290 PF00440 Bacterial regulatory proteins, tetR family KFF03_RS02300 PF02608 ABC transporter substrate-binding protein PnrA-like KFF03_RS02305 PF02653 Branched-chain amino acid transport system / permease component KFF03_RS02315 PF00005 ABC transporter KFF03_RS02320 PF01799 [2Fe-2S] binding domain KFF03_RS02320 PF00111 2Fe-2S iron-sulfur cluster binding domain KFF03_RS02325 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KFF03_RS02325 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KFF03_RS02335 PF03561 Allantoicase repeat KFF03_RS02345 PF00576 HIUase/Transthyretin family KFF03_RS02350 PF04115 Ureidoglycolate lyase KFF03_RS02355 PF01979 Amidohydrolase family KFF03_RS02375 PF02567 Phenazine biosynthesis-like protein KFF03_RS02410 PF02311 AraC-like ligand binding domain KFF03_RS02410 PF12833 Helix-turn-helix domain KFF03_RS02440 PF13419 Haloacid dehalogenase-like hydrolase KFF03_RS02445 PF03079 ARD/ARD' family KFF03_RS02450 PF00596 Class II Aldolase and Adducin N-terminal domain KFF03_RS02455 PF01008 Initiation factor 2 subunit family KFF03_RS02460 PF00881 Nitroreductase family KFF03_RS02465 PF00342 Phosphoglucose isomerase KFF03_RS02470 PF02261 Aspartate decarboxylase KFF03_RS02475 PF02569 Pantoate-beta-alanine ligase KFF03_RS02480 PF02548 Ketopantoate hydroxymethyltransferase KFF03_RS02485 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KFF03_RS02490 PF12626 Polymerase A arginine-rich C-terminus KFF03_RS02490 PF12627 Probable RNA and SrmB- binding site of polymerase A KFF03_RS02490 PF01743 Poly A polymerase head domain KFF03_RS02495 PF00158 Sigma-54 interaction domain KFF03_RS02495 PF00072 Response regulator receiver domain KFF03_RS02495 PF02954 Bacterial regulatory protein, Fis family KFF03_RS02500 PF00989 PAS fold KFF03_RS02500 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS02500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS02510 PF00749 tRNA synthetases class I (E and Q), catalytic domain KFF03_RS02515 PF01258 Prokaryotic dksA/traR C4-type zinc finger KFF03_RS02520 PF00155 Aminotransferase class I and II KFF03_RS02525 PF17746 SfsA N-terminal OB domain KFF03_RS02525 PF03749 Sugar fermentation stimulation protein RE domain KFF03_RS02540 PF01032 FecCD transport family KFF03_RS02545 PF00005 ABC transporter KFF03_RS02560 PF00136 DNA polymerase family B KFF03_RS02560 PF03104 DNA polymerase family B, exonuclease domain KFF03_RS02585 PF03150 Di-haem cytochrome c peroxidase KFF03_RS02590 PF13344 Haloacid dehalogenase-like hydrolase KFF03_RS02595 PF04073 Aminoacyl-tRNA editing domain KFF03_RS02620 PF12833 Helix-turn-helix domain KFF03_RS02620 PF02311 AraC-like ligand binding domain KFF03_RS02630 PF00639 PPIC-type PPIASE domain KFF03_RS02630 PF09312 SurA N-terminal domain KFF03_RS02640 PF03776 Septum formation topological specificity factor MinE KFF03_RS02645 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KFF03_RS02650 PF03775 Septum formation inhibitor MinC, C-terminal domain KFF03_RS02650 PF05209 Septum formation inhibitor MinC, N-terminal domain KFF03_RS02670 PF07690 Major Facilitator Superfamily KFF03_RS02675 PF01757 Acyltransferase family KFF03_RS02685 PF00795 Carbon-nitrogen hydrolase KFF03_RS02705 PF02514 CobN/Magnesium Chelatase KFF03_RS02715 PF00593 TonB dependent receptor KFF03_RS02715 PF07715 TonB-dependent Receptor Plug Domain KFF03_RS02725 PF00245 Alkaline phosphatase KFF03_RS02745 PF07715 TonB-dependent Receptor Plug Domain KFF03_RS02745 PF00593 TonB dependent receptor KFF03_RS02760 PF01250 Ribosomal protein S6 KFF03_RS02765 PF01084 Ribosomal protein S18 KFF03_RS02775 PF03948 Ribosomal protein L9, C-terminal domain KFF03_RS02775 PF01281 Ribosomal protein L9, N-terminal domain KFF03_RS02780 PF00772 DnaB-like helicase N terminal domain KFF03_RS02780 PF03796 DnaB-like helicase C terminal domain KFF03_RS02800 PF01145 SPFH domain / Band 7 family KFF03_RS02820 PF01965 DJ-1/PfpI family KFF03_RS02820 PF12833 Helix-turn-helix domain KFF03_RS02825 PF01734 Patatin-like phospholipase KFF03_RS02830 PF00111 2Fe-2S iron-sulfur cluster binding domain KFF03_RS02830 PF01799 [2Fe-2S] binding domain KFF03_RS02835 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KFF03_RS02840 PF03466 LysR substrate binding domain KFF03_RS02840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS02850 PF01323 DSBA-like thioredoxin domain KFF03_RS02875 PF00672 HAMP domain KFF03_RS02875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS02875 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS02880 PF00486 Transcriptional regulatory protein, C terminal KFF03_RS02880 PF00072 Response regulator receiver domain KFF03_RS02895 PF00842 Alanine racemase, C-terminal domain KFF03_RS02895 PF01168 Alanine racemase, N-terminal domain KFF03_RS02900 PF04237 YjbR KFF03_RS02905 PF00378 Enoyl-CoA hydratase/isomerase KFF03_RS02910 PF03060 Nitronate monooxygenase KFF03_RS02920 PF03060 Nitronate monooxygenase KFF03_RS02930 PF08443 RimK-like ATP-grasp domain KFF03_RS02930 PF18030 RimK PreATP-grasp domain KFF03_RS02950 PF02463 RecF/RecN/SMC N terminal domain KFF03_RS02955 PF01025 GrpE KFF03_RS02960 PF00012 Hsp70 protein KFF03_RS02965 PF01556 DnaJ C terminal domain KFF03_RS02965 PF00226 DnaJ domain KFF03_RS02965 PF00684 DnaJ central domain KFF03_RS02970 PF05173 Dihydrodipicolinate reductase, C-terminus KFF03_RS02970 PF01113 Dihydrodipicolinate reductase, N-terminus KFF03_RS02975 PF00440 Bacterial regulatory proteins, tetR family KFF03_RS02980 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KFF03_RS02980 PF00117 Glutamine amidotransferase class-I KFF03_RS02985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KFF03_RS02985 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KFF03_RS02985 PF02142 MGS-like domain KFF03_RS02990 PF01272 Transcription elongation factor, GreA/GreB, C-term KFF03_RS02990 PF03449 Transcription elongation factor, N-terminal KFF03_RS02995 PF07690 Major Facilitator Superfamily KFF03_RS03000 PF03061 Thioesterase superfamily KFF03_RS03005 PF12833 Helix-turn-helix domain KFF03_RS03005 PF12852 Cupin KFF03_RS03015 PF07977 FabA-like domain KFF03_RS03020 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KFF03_RS03020 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KFF03_RS03030 PF01985 CRS1 / YhbY (CRM) domain KFF03_RS03035 PF01728 FtsJ-like methyltransferase KFF03_RS03040 PF06480 FtsH Extracellular KFF03_RS03040 PF17862 AAA+ lid domain KFF03_RS03040 PF00004 ATPase family associated with various cellular activities (AAA) KFF03_RS03040 PF01434 Peptidase family M41 KFF03_RS03045 PF00809 Pterin binding enzyme KFF03_RS03050 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KFF03_RS03050 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KFF03_RS03050 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KFF03_RS03050 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KFF03_RS03055 PF00121 Triosephosphate isomerase KFF03_RS03060 PF03840 Preprotein translocase SecG subunit KFF03_RS03070 PF02576 RimP N-terminal domain KFF03_RS03070 PF17384 RimP C-terminal SH3 domain KFF03_RS03075 PF13184 NusA-like KH domain KFF03_RS03075 PF08529 NusA N-terminal domain KFF03_RS03075 PF00575 S1 RNA binding domain KFF03_RS03080 PF00009 Elongation factor Tu GTP binding domain KFF03_RS03080 PF11987 Translation-initiation factor 2 KFF03_RS03080 PF08364 Bacterial translation initiation factor IF-2 associated region KFF03_RS03080 PF04760 Translation initiation factor IF-2, N-terminal region KFF03_RS03085 PF02033 Ribosome-binding factor A KFF03_RS03090 PF09157 Pseudouridine synthase II TruB, C-terminal KFF03_RS03090 PF16198 tRNA pseudouridylate synthase B C-terminal domain KFF03_RS03090 PF01509 TruB family pseudouridylate synthase (N terminal domain) KFF03_RS03095 PF00312 Ribosomal protein S15 KFF03_RS03100 PF01138 3' exoribonuclease family, domain 1 KFF03_RS03100 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KFF03_RS03100 PF00575 S1 RNA binding domain KFF03_RS03100 PF00013 KH domain KFF03_RS03100 PF03725 3' exoribonuclease family, domain 2 KFF03_RS03115 PF12697 Alpha/beta hydrolase family KFF03_RS03120 PF04304 Protein of unknown function (DUF454) KFF03_RS03130 PF12833 Helix-turn-helix domain KFF03_RS03130 PF02311 AraC-like ligand binding domain KFF03_RS03135 PF04324 BFD-like [2Fe-2S] binding domain KFF03_RS03145 PF00152 tRNA synthetases class II (D, K and N) KFF03_RS03145 PF01336 OB-fold nucleic acid binding domain KFF03_RS03155 PF03167 Uracil DNA glycosylase superfamily KFF03_RS03160 PF13847 Methyltransferase domain KFF03_RS03165 PF02561 Flagellar protein FliS KFF03_RS03170 PF02954 Bacterial regulatory protein, Fis family KFF03_RS03170 PF06490 Flagellar regulatory protein FleQ KFF03_RS03170 PF00158 Sigma-54 interaction domain KFF03_RS03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS03175 PF13188 PAS domain KFF03_RS03175 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS03180 PF00158 Sigma-54 interaction domain KFF03_RS03180 PF00072 Response regulator receiver domain KFF03_RS03180 PF02954 Bacterial regulatory protein, Fis family KFF03_RS03185 PF00732 GMC oxidoreductase KFF03_RS03185 PF05199 GMC oxidoreductase KFF03_RS03190 PF02049 Flagellar hook-basal body complex protein FliE KFF03_RS03195 PF01514 Secretory protein of YscJ/FliF family KFF03_RS03195 PF08345 Flagellar M-ring protein C-terminal KFF03_RS03200 PF14841 FliG middle domain KFF03_RS03200 PF01706 FliG C-terminal domain KFF03_RS03200 PF14842 FliG N-terminal domain KFF03_RS03210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KFF03_RS03210 PF18269 T3SS EscN ATPase C-terminal domain KFF03_RS03225 PF00072 Response regulator receiver domain KFF03_RS03230 PF01584 CheW-like domain KFF03_RS03230 PF01627 Hpt domain KFF03_RS03230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS03230 PF02895 Signal transducing histidine kinase, homodimeric domain KFF03_RS03230 PF09078 CheY binding KFF03_RS03235 PF01584 CheW-like domain KFF03_RS03250 PF03705 CheR methyltransferase, all-alpha domain KFF03_RS03250 PF01739 CheR methyltransferase, SAM binding domain KFF03_RS03255 PF03975 CheD chemotactic sensory transduction KFF03_RS03260 PF01339 CheB methylesterase KFF03_RS03260 PF00072 Response regulator receiver domain KFF03_RS03265 PF13466 STAS domain KFF03_RS03270 PF00072 Response regulator receiver domain KFF03_RS03270 PF00486 Transcriptional regulatory protein, C terminal KFF03_RS03290 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KFF03_RS03290 PF02154 Flagellar motor switch protein FliM KFF03_RS03295 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KFF03_RS03300 PF04347 Flagellar biosynthesis protein, FliO KFF03_RS03305 PF00813 FliP family KFF03_RS03310 PF01313 Bacterial export proteins, family 3 KFF03_RS03315 PF01311 Bacterial export proteins, family 1 KFF03_RS03320 PF01312 FlhB HrpN YscU SpaS Family KFF03_RS03325 PF00771 FHIPEP family KFF03_RS03330 PF00448 SRP54-type protein, GTPase domain KFF03_RS03335 PF10609 NUBPL iron-transfer P-loop NTPase KFF03_RS03340 PF04545 Sigma-70, region 4 KFF03_RS03340 PF04542 Sigma-70 region 2 KFF03_RS03340 PF04539 Sigma-70 region 3 KFF03_RS03345 PF00072 Response regulator receiver domain KFF03_RS03350 PF04344 Chemotaxis phosphatase, CheZ KFF03_RS03355 PF01584 CheW-like domain KFF03_RS03355 PF02895 Signal transducing histidine kinase, homodimeric domain KFF03_RS03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS03355 PF00072 Response regulator receiver domain KFF03_RS03355 PF01627 Hpt domain KFF03_RS03360 PF01339 CheB methylesterase KFF03_RS03360 PF00072 Response regulator receiver domain KFF03_RS03365 PF01618 MotA/TolQ/ExbB proton channel family KFF03_RS03370 PF00691 OmpA family KFF03_RS03370 PF13677 Membrane MotB of proton-channel complex MotA/MotB KFF03_RS03375 PF13614 AAA domain KFF03_RS03395 PF01584 CheW-like domain KFF03_RS03410 PF12833 Helix-turn-helix domain KFF03_RS03410 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KFF03_RS03420 PF00578 AhpC/TSA family KFF03_RS03430 PF00111 2Fe-2S iron-sulfur cluster binding domain KFF03_RS03435 PF00268 Ribonucleotide reductase, small chain KFF03_RS03440 PF02867 Ribonucleotide reductase, barrel domain KFF03_RS03440 PF00317 Ribonucleotide reductase, all-alpha domain KFF03_RS03440 PF03477 ATP cone domain KFF03_RS03445 PF00072 Response regulator receiver domain KFF03_RS03445 PF00486 Transcriptional regulatory protein, C terminal KFF03_RS03450 PF00672 HAMP domain KFF03_RS03450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS03450 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS03455 PF03466 LysR substrate binding domain KFF03_RS03455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS03460 PF08447 PAS fold KFF03_RS03460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS03470 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS03475 PF08534 Redoxin KFF03_RS03475 PF00462 Glutaredoxin KFF03_RS03485 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KFF03_RS03510 PF13603 Leucyl-tRNA synthetase, Domain 2 KFF03_RS03510 PF00133 tRNA synthetases class I (I, L, M and V) KFF03_RS03510 PF08264 Anticodon-binding domain of tRNA KFF03_RS03520 PF13091 PLD-like domain KFF03_RS03525 PF01968 Hydantoinase/oxoprolinase KFF03_RS03525 PF05378 Hydantoinase/oxoprolinase N-terminal region KFF03_RS03540 PF00486 Transcriptional regulatory protein, C terminal KFF03_RS03540 PF00072 Response regulator receiver domain KFF03_RS03545 PF00149 Calcineurin-like phosphoesterase KFF03_RS03560 PF00535 Glycosyl transferase family 2 KFF03_RS03575 PF00534 Glycosyl transferases group 1 KFF03_RS03575 PF13439 Glycosyltransferase Family 4 KFF03_RS03580 PF13439 Glycosyltransferase Family 4 KFF03_RS03580 PF00534 Glycosyl transferases group 1 KFF03_RS03595 PF01943 Polysaccharide biosynthesis protein KFF03_RS03610 PF01050 Mannose-6-phosphate isomerase KFF03_RS03610 PF00483 Nucleotidyl transferase KFF03_RS03615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KFF03_RS03615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KFF03_RS03615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KFF03_RS03615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KFF03_RS03620 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KFF03_RS03620 PF00753 Metallo-beta-lactamase superfamily KFF03_RS03620 PF10996 Beta-Casp domain KFF03_RS03625 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KFF03_RS03625 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KFF03_RS03625 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KFF03_RS03630 PF02397 Bacterial sugar transferase KFF03_RS03645 PF10531 SLBB domain KFF03_RS03645 PF02563 Polysaccharide biosynthesis/export protein KFF03_RS03650 PF13614 AAA domain KFF03_RS03665 PF03466 LysR substrate binding domain KFF03_RS03665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS03700 PF00106 short chain dehydrogenase KFF03_RS03715 PF03441 FAD binding domain of DNA photolyase KFF03_RS03715 PF00875 DNA photolyase KFF03_RS03720 PF13411 MerR HTH family regulatory protein KFF03_RS03735 PF01593 Flavin containing amine oxidoreductase KFF03_RS03740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF03_RS03740 PF12806 Acetyl-CoA dehydrogenase C-terminal like KFF03_RS03740 PF02770 Acyl-CoA dehydrogenase, middle domain KFF03_RS03740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF03_RS03745 PF08338 Domain of unknown function (DUF1731) KFF03_RS03745 PF01370 NAD dependent epimerase/dehydratase family KFF03_RS03760 PF00875 DNA photolyase KFF03_RS03760 PF03441 FAD binding domain of DNA photolyase KFF03_RS03765 PF00875 DNA photolyase KFF03_RS03765 PF03441 FAD binding domain of DNA photolyase KFF03_RS03775 PF04244 Deoxyribodipyrimidine photo-lyase-related protein KFF03_RS03780 PF01645 Conserved region in glutamate synthase KFF03_RS03785 PF00563 EAL domain KFF03_RS03785 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS03785 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS03790 PF00563 EAL domain KFF03_RS03790 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS03790 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS03795 PF12557 Cob(I)alamin adenosyltransferase N terminal KFF03_RS03795 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP KFF03_RS03800 PF00456 Transketolase, thiamine diphosphate binding domain KFF03_RS03800 PF17831 Pyruvate dehydrogenase E1 component middle domain KFF03_RS03805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KFF03_RS03805 PF00364 Biotin-requiring enzyme KFF03_RS03805 PF02817 e3 binding domain KFF03_RS03810 PF12729 Four helix bundle sensory module for signal transduction KFF03_RS03810 PF00672 HAMP domain KFF03_RS03810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS03815 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KFF03_RS03815 PF07685 CobB/CobQ-like glutamine amidotransferase domain KFF03_RS03820 PF01923 Cobalamin adenosyltransferase KFF03_RS03835 PF00924 Mechanosensitive ion channel KFF03_RS03840 PF02558 Ketopantoate reductase PanE/ApbA KFF03_RS03840 PF08546 Ketopantoate reductase PanE/ApbA C terminal KFF03_RS03850 PF04461 Protein of unknown function (DUF520) KFF03_RS03855 PF07690 Major Facilitator Superfamily KFF03_RS03860 PF00107 Zinc-binding dehydrogenase KFF03_RS03860 PF08240 Alcohol dehydrogenase GroES-like domain KFF03_RS03870 PF06508 Queuosine biosynthesis protein QueC KFF03_RS03895 PF02608 ABC transporter substrate-binding protein PnrA-like KFF03_RS03905 PF14437 MafB19-like deaminase KFF03_RS03910 PF00270 DEAD/DEAH box helicase KFF03_RS03910 PF00271 Helicase conserved C-terminal domain KFF03_RS03915 PF01842 ACT domain KFF03_RS03915 PF08335 GlnD PII-uridylyltransferase KFF03_RS03915 PF01966 HD domain KFF03_RS03915 PF01909 Nucleotidyltransferase domain KFF03_RS03920 PF00557 Metallopeptidase family M24 KFF03_RS03925 PF00318 Ribosomal protein S2 KFF03_RS03930 PF00889 Elongation factor TS KFF03_RS03935 PF00696 Amino acid kinase family KFF03_RS03940 PF01765 Ribosome recycling factor KFF03_RS03945 PF01255 Putative undecaprenyl diphosphate synthase KFF03_RS03955 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KFF03_RS03955 PF13288 DXP reductoisomerase C-terminal domain KFF03_RS03955 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KFF03_RS03960 PF02163 Peptidase family M50 KFF03_RS03960 PF13180 PDZ domain KFF03_RS03960 PF17820 PDZ domain KFF03_RS03965 PF01103 Surface antigen KFF03_RS03965 PF07244 Surface antigen variable number repeat KFF03_RS03975 PF00132 Bacterial transferase hexapeptide (six repeats) KFF03_RS03975 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KFF03_RS03980 PF07977 FabA-like domain KFF03_RS03985 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KFF03_RS03985 PF00132 Bacterial transferase hexapeptide (six repeats) KFF03_RS03990 PF02684 Lipid-A-disaccharide synthetase KFF03_RS03995 PF01351 Ribonuclease HII KFF03_RS04010 PF00672 HAMP domain KFF03_RS04010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS04010 PF16591 Helical bimodular sensor domain KFF03_RS04015 PF00392 Bacterial regulatory proteins, gntR family KFF03_RS04025 PF00795 Carbon-nitrogen hydrolase KFF03_RS04040 PF00586 AIR synthase related protein, N-terminal domain KFF03_RS04040 PF02769 AIR synthase related protein, C-terminal domain KFF03_RS04060 PF01292 Prokaryotic cytochrome b561 KFF03_RS04065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KFF03_RS04070 PF10576 Iron-sulfur binding domain of endonuclease III KFF03_RS04070 PF00633 Helix-hairpin-helix motif KFF03_RS04070 PF00730 HhH-GPD superfamily base excision DNA repair protein KFF03_RS04080 PF00255 Glutathione peroxidase KFF03_RS04085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS04085 PF03466 LysR substrate binding domain KFF03_RS04090 PF00171 Aldehyde dehydrogenase family KFF03_RS04095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KFF03_RS04115 PF04116 Fatty acid hydroxylase superfamily KFF03_RS04120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS04120 PF03466 LysR substrate binding domain KFF03_RS04125 PF00501 AMP-binding enzyme KFF03_RS04125 PF13193 AMP-binding enzyme C-terminal domain KFF03_RS04130 PF00672 HAMP domain KFF03_RS04130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS04135 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KFF03_RS04135 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KFF03_RS04140 PF00202 Aminotransferase class-III KFF03_RS04145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS04145 PF00672 HAMP domain KFF03_RS04145 PF02743 Cache domain KFF03_RS04155 PF04545 Sigma-70, region 4 KFF03_RS04155 PF04539 Sigma-70 region 3 KFF03_RS04155 PF04542 Sigma-70 region 2 KFF03_RS04155 PF00140 Sigma-70 factor, region 1.2 KFF03_RS04155 PF03979 Sigma-70 factor, region 1.1 KFF03_RS04155 PF04546 Sigma-70, non-essential region KFF03_RS04160 PF10410 DnaB-helicase binding domain of primase KFF03_RS04160 PF08278 DNA primase DnaG DnaB-binding KFF03_RS04160 PF08275 DNA primase catalytic core, N-terminal domain KFF03_RS04160 PF13662 Toprim domain KFF03_RS04160 PF01807 CHC2 zinc finger KFF03_RS04170 PF01165 Ribosomal protein S21 KFF03_RS04175 PF00814 Glycoprotease family KFF03_RS04180 PF02152 Dihydroneopterin aldolase KFF03_RS04185 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KFF03_RS04185 PF00809 Pterin binding enzyme KFF03_RS04190 PF01743 Poly A polymerase head domain KFF03_RS04190 PF12627 Probable RNA and SrmB- binding site of polymerase A KFF03_RS04190 PF01966 HD domain KFF03_RS04215 PF04293 SpoVR like protein KFF03_RS04220 PF04285 Protein of unknown function (DUF444) KFF03_RS04225 PF06798 PrkA serine protein kinase C-terminal domain KFF03_RS04225 PF08298 PrkA AAA domain KFF03_RS04230 PF00581 Rhodanese-like domain KFF03_RS04235 PF00149 Calcineurin-like phosphoesterase KFF03_RS04240 PF04379 ApaG domain KFF03_RS04245 PF00398 Ribosomal RNA adenine dimethylase KFF03_RS04250 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KFF03_RS04255 PF00639 PPIC-type PPIASE domain KFF03_RS04255 PF09312 SurA N-terminal domain KFF03_RS04260 PF04453 LPS transport system D KFF03_RS04260 PF03968 OstA-like protein KFF03_RS04265 PF01636 Phosphotransferase enzyme family KFF03_RS04270 PF00483 Nucleotidyl transferase KFF03_RS04275 PF00226 DnaJ domain KFF03_RS04275 PF05099 Tellurite resistance protein TerB KFF03_RS04280 PF00472 RF-1 domain KFF03_RS04285 PF03006 Haemolysin-III related KFF03_RS04290 PF01541 GIY-YIG catalytic domain KFF03_RS04315 PF03958 Bacterial type II/III secretion system short domain KFF03_RS04315 PF00263 Bacterial type II and III secretion system protein KFF03_RS04320 PF02545 Maf-like protein KFF03_RS04325 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KFF03_RS04325 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KFF03_RS04375 PF11892 Domain of unknown function (DUF3412) KFF03_RS04375 PF03641 Possible lysine decarboxylase KFF03_RS04375 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases KFF03_RS04380 PF01769 Divalent cation transporter KFF03_RS04380 PF03448 MgtE intracellular N domain KFF03_RS04380 PF00571 CBS domain KFF03_RS04385 PF00551 Formyl transferase KFF03_RS04390 PF02803 Thiolase, C-terminal domain KFF03_RS04390 PF00108 Thiolase, N-terminal domain KFF03_RS04400 PF07044 Protein of unknown function (DUF1329) KFF03_RS04410 PF01636 Phosphotransferase enzyme family KFF03_RS04415 PF00156 Phosphoribosyl transferase domain KFF03_RS04420 PF04055 Radical SAM superfamily KFF03_RS04420 PF06968 Biotin and Thiamin Synthesis associated domain KFF03_RS04435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF03_RS04435 PF02770 Acyl-CoA dehydrogenase, middle domain KFF03_RS04435 PF12806 Acetyl-CoA dehydrogenase C-terminal like KFF03_RS04435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF03_RS04440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF03_RS04440 PF02770 Acyl-CoA dehydrogenase, middle domain KFF03_RS04440 PF12806 Acetyl-CoA dehydrogenase C-terminal like KFF03_RS04440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF03_RS04460 PF04715 Anthranilate synthase component I, N terminal region KFF03_RS04460 PF00425 chorismate binding enzyme KFF03_RS04465 PF00117 Glutamine amidotransferase class-I KFF03_RS04470 PF00591 Glycosyl transferase family, a/b domain KFF03_RS04470 PF02885 Glycosyl transferase family, helical bundle domain KFF03_RS04475 PF00218 Indole-3-glycerol phosphate synthase KFF03_RS04490 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KFF03_RS04495 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system KFF03_RS04500 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KFF03_RS04505 PF13476 AAA domain KFF03_RS04515 PF02347 Glycine cleavage system P-protein KFF03_RS04520 PF01597 Glycine cleavage H-protein KFF03_RS04525 PF01571 Aminomethyltransferase folate-binding domain KFF03_RS04525 PF08669 Glycine cleavage T-protein C-terminal barrel domain KFF03_RS04530 PF00440 Bacterial regulatory proteins, tetR family KFF03_RS04535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KFF03_RS04540 PF00873 AcrB/AcrD/AcrF family KFF03_RS04565 PF00578 AhpC/TSA family KFF03_RS04565 PF10417 C-terminal domain of 1-Cys peroxiredoxin KFF03_RS04580 PF08241 Methyltransferase domain KFF03_RS04580 PF12697 Alpha/beta hydrolase family KFF03_RS04590 PF00155 Aminotransferase class I and II KFF03_RS04595 PF00202 Aminotransferase class-III KFF03_RS04595 PF04055 Radical SAM superfamily KFF03_RS04595 PF06968 Biotin and Thiamin Synthesis associated domain KFF03_RS04610 PF00158 Sigma-54 interaction domain KFF03_RS04610 PF01590 GAF domain KFF03_RS04630 PF02381 MraZ protein, putative antitoxin-like KFF03_RS04635 PF01795 MraW methylase family KFF03_RS04645 PF03717 Penicillin-binding Protein dimerisation domain KFF03_RS04645 PF00905 Penicillin binding protein transpeptidase domain KFF03_RS04650 PF02875 Mur ligase family, glutamate ligase domain KFF03_RS04650 PF01225 Mur ligase family, catalytic domain KFF03_RS04650 PF08245 Mur ligase middle domain KFF03_RS04655 PF08245 Mur ligase middle domain KFF03_RS04655 PF02875 Mur ligase family, glutamate ligase domain KFF03_RS04655 PF01225 Mur ligase family, catalytic domain KFF03_RS04660 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KFF03_RS04660 PF00953 Glycosyl transferase family 4 KFF03_RS04665 PF08245 Mur ligase middle domain KFF03_RS04665 PF02875 Mur ligase family, glutamate ligase domain KFF03_RS04670 PF01098 Cell cycle protein KFF03_RS04675 PF04101 Glycosyltransferase family 28 C-terminal domain KFF03_RS04675 PF03033 Glycosyltransferase family 28 N-terminal domain KFF03_RS04680 PF02875 Mur ligase family, glutamate ligase domain KFF03_RS04680 PF08245 Mur ligase middle domain KFF03_RS04680 PF01225 Mur ligase family, catalytic domain KFF03_RS04685 PF07478 D-ala D-ala ligase C-terminus KFF03_RS04685 PF01820 D-ala D-ala ligase N-terminus KFF03_RS04690 PF08478 POTRA domain, FtsQ-type KFF03_RS04690 PF03799 Cell division protein FtsQ KFF03_RS04695 PF02491 SHS2 domain inserted in FTSA KFF03_RS04700 PF12327 FtsZ family, C-terminal domain KFF03_RS04700 PF00091 Tubulin/FtsZ family, GTPase domain KFF03_RS04705 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KFF03_RS04710 PF08525 Opacity-associated protein A N-terminal motif KFF03_RS04710 PF01551 Peptidase family M23 KFF03_RS04710 PF01476 LysM domain KFF03_RS04715 PF02810 SEC-C motif KFF03_RS04715 PF07517 SecA DEAD-like domain KFF03_RS04715 PF01043 SecA preprotein cross-linking domain KFF03_RS04715 PF07516 SecA Wing and Scaffold domain KFF03_RS04720 PF01960 ArgJ family KFF03_RS04725 PF00293 NUDIX domain KFF03_RS04735 PF07729 FCD domain KFF03_RS04735 PF00392 Bacterial regulatory proteins, gntR family KFF03_RS04740 PF00795 Carbon-nitrogen hydrolase KFF03_RS04745 PF00571 CBS domain KFF03_RS04745 PF03471 Transporter associated domain KFF03_RS04750 PF02130 Uncharacterized protein family UPF0054 KFF03_RS04755 PF02562 PhoH-like protein KFF03_RS04760 PF01938 TRAM domain KFF03_RS04760 PF04055 Radical SAM superfamily KFF03_RS04760 PF00919 Uncharacterized protein family UPF0004 KFF03_RS04780 PF00440 Bacterial regulatory proteins, tetR family KFF03_RS04780 PF16295 Tetracyclin repressor-like, C-terminal domain KFF03_RS04785 PF01926 50S ribosome-binding GTPase KFF03_RS04785 PF06071 Protein of unknown function (DUF933) KFF03_RS04790 PF01195 Peptidyl-tRNA hydrolase KFF03_RS04795 PF01386 Ribosomal L25p family KFF03_RS04795 PF14693 Ribosomal protein TL5, C-terminal domain KFF03_RS04800 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KFF03_RS04800 PF14572 Phosphoribosyl synthetase-associated domain KFF03_RS04810 PF08544 GHMP kinases C terminal KFF03_RS04810 PF00288 GHMP kinases N terminal domain KFF03_RS04815 PF03550 Outer membrane lipoprotein LolB KFF03_RS04825 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KFF03_RS04825 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KFF03_RS04825 PF01488 Shikimate / quinate 5-dehydrogenase KFF03_RS04830 PF00472 RF-1 domain KFF03_RS04830 PF03462 PCRF domain KFF03_RS04835 PF13847 Methyltransferase domain KFF03_RS04835 PF17827 PrmC N-terminal domain KFF03_RS04840 PF00899 ThiF family KFF03_RS04845 PF13580 SIS domain KFF03_RS04850 PF02021 Uncharacterised protein family UPF0102 KFF03_RS04855 PF04348 LppC putative lipoprotein KFF03_RS04860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KFF03_RS04875 PF00762 Ferrochelatase KFF03_RS04880 PF03061 Thioesterase superfamily KFF03_RS04885 PF00378 Enoyl-CoA hydratase/isomerase KFF03_RS04900 PF18267 Rubredoxin NAD+ reductase C-terminal domain KFF03_RS04900 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF03_RS04900 PF04324 BFD-like [2Fe-2S] binding domain KFF03_RS04900 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KFF03_RS04915 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KFF03_RS04925 PF01894 Uncharacterised protein family UPF0047 KFF03_RS04930 PF01645 Conserved region in glutamate synthase KFF03_RS04945 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF03_RS04945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KFF03_RS04955 PF00107 Zinc-binding dehydrogenase KFF03_RS04955 PF08240 Alcohol dehydrogenase GroES-like domain KFF03_RS04960 PF00005 ABC transporter KFF03_RS04960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KFF03_RS04965 PF12911 N-terminal TM domain of oligopeptide transport permease C KFF03_RS04965 PF00528 Binding-protein-dependent transport system inner membrane component KFF03_RS04970 PF00528 Binding-protein-dependent transport system inner membrane component KFF03_RS04975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KFF03_RS04985 PF14821 Threonine synthase N terminus KFF03_RS04985 PF00291 Pyridoxal-phosphate dependent enzyme KFF03_RS04990 PF08448 PAS fold KFF03_RS04990 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS05000 PF00210 Ferritin-like domain KFF03_RS05005 PF00210 Ferritin-like domain KFF03_RS05010 PF08668 HDOD domain KFF03_RS05015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KFF03_RS05015 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KFF03_RS05020 PF01261 Xylose isomerase-like TIM barrel KFF03_RS05025 PF06945 Protein of unknown function (DUF1289) KFF03_RS05030 PF00313 'Cold-shock' DNA-binding domain KFF03_RS05035 PF10672 S-adenosylmethionine-dependent methyltransferase KFF03_RS05035 PF17785 PUA-like domain KFF03_RS05040 PF01758 Sodium Bile acid symporter family KFF03_RS05050 PF12833 Helix-turn-helix domain KFF03_RS05065 PF05985 Ethanolamine ammonia-lyase light chain (EutC) KFF03_RS05070 PF06751 Ethanolamine ammonia lyase large subunit (EutB) KFF03_RS05080 PF00909 Ammonium Transporter Family KFF03_RS05085 PF01613 Flavin reductase like domain KFF03_RS05150 PF00106 short chain dehydrogenase KFF03_RS05175 PF17131 Outer membrane lipoprotein-sorting protein KFF03_RS05190 PF00317 Ribonucleotide reductase, all-alpha domain KFF03_RS05190 PF02867 Ribonucleotide reductase, barrel domain KFF03_RS05190 PF03477 ATP cone domain KFF03_RS05195 PF04191 Phospholipid methyltransferase KFF03_RS05200 PF08713 DNA alkylation repair enzyme KFF03_RS05210 PF13533 Biotin-lipoyl like KFF03_RS05215 PF00583 Acetyltransferase (GNAT) family KFF03_RS05220 PF00202 Aminotransferase class-III KFF03_RS05225 PF06339 Ectoine synthase KFF03_RS05230 PF00484 Carbonic anhydrase KFF03_RS05235 PF09312 SurA N-terminal domain KFF03_RS05240 PF02665 Nitrate reductase gamma subunit KFF03_RS05245 PF02613 Nitrate reductase delta subunit KFF03_RS05250 PF13247 4Fe-4S dicluster domain KFF03_RS05250 PF14711 Respiratory nitrate reductase beta C-terminal KFF03_RS05255 PF00384 Molybdopterin oxidoreductase KFF03_RS05255 PF01568 Molydopterin dinucleotide binding domain KFF03_RS05255 PF14710 Respiratory nitrate reductase alpha N-terminal KFF03_RS05260 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KFF03_RS05260 PF07730 Histidine kinase KFF03_RS05260 PF00672 HAMP domain KFF03_RS05260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS05270 PF07690 Major Facilitator Superfamily KFF03_RS05275 PF00196 Bacterial regulatory proteins, luxR family KFF03_RS05275 PF00072 Response regulator receiver domain KFF03_RS05280 PF00994 Probable molybdopterin binding domain KFF03_RS05280 PF03454 MoeA C-terminal region (domain IV) KFF03_RS05280 PF03453 MoeA N-terminal region (domain I and II) KFF03_RS05295 PF00994 Probable molybdopterin binding domain KFF03_RS05300 PF12804 MobA-like NTP transferase domain KFF03_RS05305 PF04055 Radical SAM superfamily KFF03_RS05305 PF06463 Molybdenum Cofactor Synthesis C KFF03_RS05320 PF07690 Major Facilitator Superfamily KFF03_RS05325 PF07690 Major Facilitator Superfamily KFF03_RS05330 PF00069 Protein kinase domain KFF03_RS05345 PF08859 DGC domain KFF03_RS05355 PF00271 Helicase conserved C-terminal domain KFF03_RS05355 PF03461 TRCF domain KFF03_RS05355 PF17757 UvrB interaction domain KFF03_RS05355 PF02559 CarD-like/TRCF domain KFF03_RS05355 PF00270 DEAD/DEAH box helicase KFF03_RS05370 PF03435 Saccharopine dehydrogenase NADP binding domain KFF03_RS05375 PF01022 Bacterial regulatory protein, arsR family KFF03_RS05385 PF01758 Sodium Bile acid symporter family KFF03_RS05390 PF03358 NADPH-dependent FMN reductase KFF03_RS05410 PF07715 TonB-dependent Receptor Plug Domain KFF03_RS05410 PF00593 TonB dependent receptor KFF03_RS05420 PF07715 TonB-dependent Receptor Plug Domain KFF03_RS05420 PF00593 TonB dependent receptor KFF03_RS05430 PF02254 TrkA-N domain KFF03_RS05430 PF00999 Sodium/hydrogen exchanger family KFF03_RS05435 PF03641 Possible lysine decarboxylase KFF03_RS05450 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KFF03_RS05455 PF00561 alpha/beta hydrolase fold KFF03_RS05460 PF00497 Bacterial extracellular solute-binding proteins, family 3 KFF03_RS05460 PF01464 Transglycosylase SLT domain KFF03_RS05465 PF02769 AIR synthase related protein, C-terminal domain KFF03_RS05465 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KFF03_RS05465 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KFF03_RS05485 PF00085 Thioredoxin KFF03_RS05490 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS05490 PF00072 Response regulator receiver domain KFF03_RS05495 PF02690 Na+/Pi-cotransporter KFF03_RS05515 PF00391 PEP-utilising enzyme, mobile domain KFF03_RS05515 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KFF03_RS05525 PF13193 AMP-binding enzyme C-terminal domain KFF03_RS05525 PF00501 AMP-binding enzyme KFF03_RS05535 PF00886 Ribosomal protein S16 KFF03_RS05540 PF05239 PRC-barrel domain KFF03_RS05540 PF01782 RimM N-terminal domain KFF03_RS05545 PF01746 tRNA (Guanine-1)-methyltransferase KFF03_RS05550 PF01245 Ribosomal protein L19 KFF03_RS05555 PF10411 Disulfide bond isomerase protein N-terminus KFF03_RS05555 PF13098 Thioredoxin-like domain KFF03_RS05565 PF01842 ACT domain KFF03_RS05565 PF03447 Homoserine dehydrogenase, NAD binding domain KFF03_RS05565 PF00742 Homoserine dehydrogenase KFF03_RS05570 PF07044 Protein of unknown function (DUF1329) KFF03_RS05575 PF01464 Transglycosylase SLT domain KFF03_RS05575 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain KFF03_RS05600 PF02075 Crossover junction endodeoxyribonuclease RuvC KFF03_RS05605 PF01330 RuvA N terminal domain KFF03_RS05605 PF07499 RuvA, C-terminal domain KFF03_RS05610 PF17864 RuvB AAA lid domain KFF03_RS05610 PF05491 RuvB C-terminal winged helix domain KFF03_RS05610 PF05496 Holliday junction DNA helicase RuvB P-loop domain KFF03_RS05615 PF03061 Thioesterase superfamily KFF03_RS05620 PF01618 MotA/TolQ/ExbB proton channel family KFF03_RS05625 PF02472 Biopolymer transport protein ExbD/TolR KFF03_RS05635 PF07676 WD40-like Beta Propeller Repeat KFF03_RS05635 PF04052 TolB amino-terminal domain KFF03_RS05640 PF00691 OmpA family KFF03_RS05660 PF02445 Quinolinate synthetase A protein KFF03_RS05665 PF01435 Peptidase family M48 KFF03_RS05670 PF01206 Sulfurtransferase TusA KFF03_RS05675 PF01594 AI-2E family transporter KFF03_RS05680 PF00701 Dihydrodipicolinate synthetase family KFF03_RS05690 PF00753 Metallo-beta-lactamase superfamily KFF03_RS05695 PF01259 SAICAR synthetase KFF03_RS05705 PF00575 S1 RNA binding domain KFF03_RS05705 PF08206 Ribonuclease B OB domain KFF03_RS05705 PF00773 RNB domain KFF03_RS05710 PF16655 PhoD-like phosphatase, N-terminal domain KFF03_RS05710 PF09423 PhoD-like phosphatase KFF03_RS05725 PF01625 Peptide methionine sulfoxide reductase KFF03_RS05735 PF01026 TatD related DNase KFF03_RS05745 PF01384 Phosphate transporter family KFF03_RS05750 PF05971 RNA methyltransferase KFF03_RS05770 PF12706 Beta-lactamase superfamily domain KFF03_RS05775 PF17932 Tetracyclin repressor-like, C-terminal domain KFF03_RS05775 PF00440 Bacterial regulatory proteins, tetR family KFF03_RS05780 PF02384 N-6 DNA Methylase KFF03_RS05785 PF01420 Type I restriction modification DNA specificity domain KFF03_RS05800 PF18766 SWI2/SNF2 ATPase KFF03_RS05800 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KFF03_RS05800 PF11867 Domain of unknown function (DUF3387) KFF03_RS05805 PF11867 Domain of unknown function (DUF3387) KFF03_RS05805 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KFF03_RS05805 PF18766 SWI2/SNF2 ATPase KFF03_RS05825 PF00561 alpha/beta hydrolase fold KFF03_RS05825 PF08386 TAP-like protein KFF03_RS05830 PF00929 Exonuclease KFF03_RS05830 PF08411 Exonuclease C-terminal KFF03_RS05835 PF12833 Helix-turn-helix domain KFF03_RS05835 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KFF03_RS05840 PF01590 GAF domain KFF03_RS05840 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS05840 PF00563 EAL domain KFF03_RS05840 PF00360 Phytochrome region KFF03_RS05850 PF00072 Response regulator receiver domain KFF03_RS05850 PF00158 Sigma-54 interaction domain KFF03_RS05850 PF02954 Bacterial regulatory protein, Fis family KFF03_RS05880 PF00248 Aldo/keto reductase family KFF03_RS05885 PF01966 HD domain KFF03_RS05890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS05890 PF00672 HAMP domain KFF03_RS05895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KFF03_RS05900 PF00561 alpha/beta hydrolase fold KFF03_RS05905 PF10502 Signal peptidase, peptidase S26 KFF03_RS05920 PF00561 alpha/beta hydrolase fold KFF03_RS05940 PF12833 Helix-turn-helix domain KFF03_RS05985 PF08272 Topoisomerase I zinc-ribbon-like KFF03_RS05985 PF01751 Toprim domain KFF03_RS05985 PF01131 DNA topoisomerase KFF03_RS05985 PF01396 Topoisomerase DNA binding C4 zinc finger KFF03_RS06005 PF01513 ATP-NAD kinase KFF03_RS06010 PF00149 Calcineurin-like phosphoesterase KFF03_RS06015 PF01694 Rhomboid family KFF03_RS06015 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease KFF03_RS06020 PF07023 Protein of unknown function (DUF1315) KFF03_RS06035 PF00884 Sulfatase KFF03_RS06040 PF12833 Helix-turn-helix domain KFF03_RS06045 PF11940 Domain of unknown function (DUF3458) Ig-like fold KFF03_RS06045 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KFF03_RS06045 PF01433 Peptidase family M1 domain KFF03_RS06050 PF07044 Protein of unknown function (DUF1329) KFF03_RS06065 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KFF03_RS06065 PF12833 Helix-turn-helix domain KFF03_RS06105 PF00873 AcrB/AcrD/AcrF family KFF03_RS06110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KFF03_RS06110 PF00529 HlyD membrane-fusion protein of T1SS KFF03_RS06115 PF12848 ABC transporter KFF03_RS06115 PF16326 ABC transporter C-terminal domain KFF03_RS06115 PF00005 ABC transporter KFF03_RS06130 PF01180 Dihydroorotate dehydrogenase KFF03_RS06135 PF04957 Ribosome modulation factor KFF03_RS06140 PF01170 Putative RNA methylase family UPF0020 KFF03_RS06140 PF10672 S-adenosylmethionine-dependent methyltransferase KFF03_RS06140 PF02926 THUMP domain KFF03_RS06150 PF04231 Endonuclease I KFF03_RS06165 PF00106 short chain dehydrogenase KFF03_RS06170 PF13419 Haloacid dehalogenase-like hydrolase KFF03_RS06180 PF01979 Amidohydrolase family KFF03_RS06185 PF03989 DNA gyrase C-terminal domain, beta-propeller KFF03_RS06185 PF00521 DNA gyrase/topoisomerase IV, subunit A KFF03_RS06195 PF00266 Aminotransferase class-V KFF03_RS06200 PF01817 Chorismate mutase type II KFF03_RS06200 PF01842 ACT domain KFF03_RS06200 PF00800 Prephenate dehydratase KFF03_RS06205 PF00155 Aminotransferase class I and II KFF03_RS06210 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KFF03_RS06215 PF02224 Cytidylate kinase KFF03_RS06220 PF00575 S1 RNA binding domain KFF03_RS06225 PF00216 Bacterial DNA-binding protein KFF03_RS06235 PF18073 Rubredoxin metal binding domain KFF03_RS06240 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KFF03_RS06270 PF00535 Glycosyl transferase family 2 KFF03_RS06280 PF00733 Asparagine synthase KFF03_RS06280 PF13537 Glutamine amidotransferase domain KFF03_RS06305 PF02543 Carbamoyltransferase N-terminus KFF03_RS06305 PF16861 Carbamoyltransferase C-terminus KFF03_RS06320 PF01370 NAD dependent epimerase/dehydratase family KFF03_RS06325 PF02397 Bacterial sugar transferase KFF03_RS06330 PF02719 Polysaccharide biosynthesis protein KFF03_RS06335 PF00692 dUTPase KFF03_RS06345 PF00551 Formyl transferase KFF03_RS06350 PF00586 AIR synthase related protein, N-terminal domain KFF03_RS06350 PF02769 AIR synthase related protein, C-terminal domain KFF03_RS06360 PF00308 Bacterial dnaA protein KFF03_RS06365 PF00155 Aminotransferase class I and II KFF03_RS06370 PF17757 UvrB interaction domain KFF03_RS06370 PF12344 Ultra-violet resistance protein B KFF03_RS06370 PF02151 UvrB/uvrC motif KFF03_RS06370 PF04851 Type III restriction enzyme, res subunit KFF03_RS06370 PF00271 Helicase conserved C-terminal domain KFF03_RS06390 PF12848 ABC transporter KFF03_RS06390 PF00005 ABC transporter KFF03_RS06400 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH KFF03_RS06410 PF01132 Elongation factor P (EF-P) OB domain KFF03_RS06410 PF08207 Elongation factor P (EF-P) KOW-like domain KFF03_RS06410 PF09285 Elongation factor P, C-terminal KFF03_RS06415 PF17783 CvfB-like winged helix domain KFF03_RS06415 PF13509 S1 domain KFF03_RS06435 PF00860 Permease family KFF03_RS06445 PF07690 Major Facilitator Superfamily KFF03_RS06450 PF01206 Sulfurtransferase TusA KFF03_RS06460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KFF03_RS06460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KFF03_RS06460 PF02824 TGS domain KFF03_RS06460 PF03129 Anticodon binding domain KFF03_RS06465 PF00707 Translation initiation factor IF-3, C-terminal domain KFF03_RS06465 PF05198 Translation initiation factor IF-3, N-terminal domain KFF03_RS06470 PF01632 Ribosomal protein L35 KFF03_RS06475 PF00453 Ribosomal protein L20 KFF03_RS06480 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KFF03_RS06480 PF01409 tRNA synthetases class II core domain (F) KFF03_RS06485 PF03484 tRNA synthetase B5 domain KFF03_RS06485 PF03147 Ferredoxin-fold anticodon binding domain KFF03_RS06485 PF03483 B3/4 domain KFF03_RS06485 PF01588 Putative tRNA binding domain KFF03_RS06485 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KFF03_RS06490 PF00216 Bacterial DNA-binding protein KFF03_RS06530 PF08534 Redoxin KFF03_RS06575 PF04972 BON domain KFF03_RS06575 PF00263 Bacterial type II and III secretion system protein KFF03_RS06575 PF13629 Pilus formation protein N terminal region KFF03_RS06590 PF00437 Type II/IV secretion system protein KFF03_RS06630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS06630 PF00672 HAMP domain KFF03_RS06630 PF12729 Four helix bundle sensory module for signal transduction KFF03_RS06645 PF01040 UbiA prenyltransferase family KFF03_RS06650 PF01243 Pyridoxamine 5'-phosphate oxidase KFF03_RS06650 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KFF03_RS06660 PF03922 OmpW family KFF03_RS06665 PF13091 PLD-like domain KFF03_RS06670 PF01227 GTP cyclohydrolase I KFF03_RS06675 PF01177 Asp/Glu/Hydantoin racemase KFF03_RS06685 PF07694 5TMR of 5TMR-LYT KFF03_RS06685 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS06690 PF03976 Polyphosphate kinase 2 (PPK2) KFF03_RS06700 PF02463 RecF/RecN/SMC N terminal domain KFF03_RS06705 PF04354 ZipA, C-terminal FtsZ-binding domain KFF03_RS06705 PF04354 ZipA, C-terminal FtsZ-binding domain KFF03_RS06710 PF12826 Helix-hairpin-helix motif KFF03_RS06710 PF00533 BRCA1 C Terminus (BRCT) domain KFF03_RS06710 PF01653 NAD-dependent DNA ligase adenylation domain KFF03_RS06710 PF03120 NAD-dependent DNA ligase OB-fold domain KFF03_RS06710 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KFF03_RS06720 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS06720 PF00563 EAL domain KFF03_RS06720 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS06730 PF13519 von Willebrand factor type A domain KFF03_RS06745 PF01882 Protein of unknown function DUF58 KFF03_RS06750 PF17863 AAA lid domain KFF03_RS06750 PF07726 ATPase family associated with various cellular activities (AAA) KFF03_RS06755 PF05088 Bacterial NAD-glutamate dehydrogenase KFF03_RS06785 PF02028 BCCT, betaine/carnitine/choline family transporter KFF03_RS06790 PF02028 BCCT, betaine/carnitine/choline family transporter KFF03_RS06795 PF07733 Bacterial DNA polymerase III alpha NTPase domain KFF03_RS06795 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KFF03_RS06795 PF14579 Helix-hairpin-helix motif KFF03_RS06795 PF02811 PHP domain KFF03_RS06795 PF00929 Exonuclease KFF03_RS06800 PF00571 CBS domain KFF03_RS06800 PF00478 IMP dehydrogenase / GMP reductase domain KFF03_RS06805 PF01638 HxlR-like helix-turn-helix KFF03_RS06815 PF00487 Fatty acid desaturase KFF03_RS06820 PF00111 2Fe-2S iron-sulfur cluster binding domain KFF03_RS06820 PF00970 Oxidoreductase FAD-binding domain KFF03_RS06820 PF00175 Oxidoreductase NAD-binding domain KFF03_RS06825 PF12833 Helix-turn-helix domain KFF03_RS06825 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KFF03_RS06835 PF07963 Prokaryotic N-terminal methylation motif KFF03_RS06840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KFF03_RS06850 PF05114 Protein of unknown function (DUF692) KFF03_RS06860 PF00924 Mechanosensitive ion channel KFF03_RS06860 PF05552 Conserved TM helix KFF03_RS06870 PF02798 Glutathione S-transferase, N-terminal domain KFF03_RS06875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KFF03_RS06875 PF00205 Thiamine pyrophosphate enzyme, central domain KFF03_RS06875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KFF03_RS06880 PF00171 Aldehyde dehydrogenase family KFF03_RS06895 PF12704 MacB-like periplasmic core domain KFF03_RS06895 PF02687 FtsX-like permease family KFF03_RS06900 PF00005 ABC transporter KFF03_RS06910 PF01502 Phosphoribosyl-AMP cyclohydrolase KFF03_RS06935 PF00166 Chaperonin 10 Kd subunit KFF03_RS06940 PF00118 TCP-1/cpn60 chaperonin family KFF03_RS06960 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS06960 PF08448 PAS fold KFF03_RS06970 PF00909 Ammonium Transporter Family KFF03_RS06985 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KFF03_RS06985 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KFF03_RS06985 PF00378 Enoyl-CoA hydratase/isomerase KFF03_RS06990 PF02803 Thiolase, C-terminal domain KFF03_RS06990 PF00108 Thiolase, N-terminal domain KFF03_RS07000 PF07690 Major Facilitator Superfamily KFF03_RS07005 PF00378 Enoyl-CoA hydratase/isomerase KFF03_RS07005 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KFF03_RS07005 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KFF03_RS07010 PF00027 Cyclic nucleotide-binding domain KFF03_RS07010 PF00325 Bacterial regulatory proteins, crp family KFF03_RS07025 PF00403 Heavy-metal-associated domain KFF03_RS07035 PF12801 4Fe-4S binding domain KFF03_RS07035 PF13746 4Fe-4S dicluster domain KFF03_RS07035 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase KFF03_RS07040 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP KFF03_RS07040 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KFF03_RS07055 PF00115 Cytochrome C and Quinol oxidase polypeptide I KFF03_RS07070 PF00106 short chain dehydrogenase KFF03_RS07075 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KFF03_RS07075 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KFF03_RS07075 PF00378 Enoyl-CoA hydratase/isomerase KFF03_RS07105 PF00196 Bacterial regulatory proteins, luxR family KFF03_RS07105 PF00072 Response regulator receiver domain KFF03_RS07110 PF17200 Single Cache domain 2 KFF03_RS07110 PF07730 Histidine kinase KFF03_RS07115 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KFF03_RS07125 PF03480 Bacterial extracellular solute-binding protein, family 7 KFF03_RS07135 PF00873 AcrB/AcrD/AcrF family KFF03_RS07140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KFF03_RS07145 PF02146 Sir2 family KFF03_RS07150 PF01734 Patatin-like phospholipase KFF03_RS07155 PF00677 Lumazine binding domain KFF03_RS07170 PF09308 LuxQ, periplasmic KFF03_RS07170 PF00072 Response regulator receiver domain KFF03_RS07170 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS07170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS07185 PF00271 Helicase conserved C-terminal domain KFF03_RS07185 PF04408 Helicase associated domain (HA2) KFF03_RS07185 PF00270 DEAD/DEAH box helicase KFF03_RS07185 PF08482 ATP-dependent helicase C-terminal KFF03_RS07195 PF00563 EAL domain KFF03_RS07195 PF13188 PAS domain KFF03_RS07195 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS07195 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS07205 PF02803 Thiolase, C-terminal domain KFF03_RS07205 PF00108 Thiolase, N-terminal domain KFF03_RS07215 PF00117 Glutamine amidotransferase class-I KFF03_RS07215 PF00958 GMP synthase C terminal domain KFF03_RS07215 PF02540 NAD synthase KFF03_RS07220 PF12843 Putative quorum-sensing-regulated virulence factor KFF03_RS07230 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS07230 PF00563 EAL domain KFF03_RS07230 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS07235 PF06865 Pyrimidine/purine nucleoside phosphorylase KFF03_RS07240 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS07240 PF00497 Bacterial extracellular solute-binding proteins, family 3 KFF03_RS07240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS07245 PF03880 DbpA RNA binding domain KFF03_RS07245 PF00270 DEAD/DEAH box helicase KFF03_RS07245 PF00271 Helicase conserved C-terminal domain KFF03_RS07255 PF00072 Response regulator receiver domain KFF03_RS07260 PF16916 Dimerisation domain of Zinc Transporter KFF03_RS07260 PF01545 Cation efflux family KFF03_RS07275 PF00291 Pyridoxal-phosphate dependent enzyme KFF03_RS07280 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS07280 PF00360 Phytochrome region KFF03_RS07280 PF00563 EAL domain KFF03_RS07280 PF01590 GAF domain KFF03_RS07285 PF01553 Acyltransferase KFF03_RS07290 PF07085 DRTGG domain KFF03_RS07290 PF01515 Phosphate acetyl/butaryl transferase KFF03_RS07295 PF00871 Acetokinase family KFF03_RS07310 PF00563 EAL domain KFF03_RS07310 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS07310 PF01590 GAF domain KFF03_RS07310 PF00360 Phytochrome region KFF03_RS07335 PF04055 Radical SAM superfamily KFF03_RS07335 PF06969 HemN C-terminal domain KFF03_RS07345 PF01312 FlhB HrpN YscU SpaS Family KFF03_RS07355 PF00005 ABC transporter KFF03_RS07360 PF03379 CcmB protein KFF03_RS07365 PF01578 Cytochrome C assembly protein KFF03_RS07370 PF04995 Heme exporter protein D (CcmD) KFF03_RS07375 PF03100 CcmE KFF03_RS07380 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KFF03_RS07380 PF01578 Cytochrome C assembly protein KFF03_RS07385 PF08534 Redoxin KFF03_RS07390 PF03918 Cytochrome C biogenesis protein KFF03_RS07415 PF13673 Acetyltransferase (GNAT) domain KFF03_RS07430 PF00155 Aminotransferase class I and II KFF03_RS07430 PF00392 Bacterial regulatory proteins, gntR family KFF03_RS07435 PF14602 Hexapeptide repeat of succinyl-transferase KFF03_RS07435 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle KFF03_RS07440 PF03960 ArsC family KFF03_RS07455 PF12729 Four helix bundle sensory module for signal transduction KFF03_RS07455 PF00672 HAMP domain KFF03_RS07455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS07460 PF02230 Phospholipase/Carboxylesterase KFF03_RS07475 PF00579 tRNA synthetases class I (W and Y) KFF03_RS07480 PF02616 Segregation and condensation protein ScpA KFF03_RS07490 PF01479 S4 domain KFF03_RS07490 PF00849 RNA pseudouridylate synthase KFF03_RS07510 PF03969 AFG1-like ATPase KFF03_RS07520 PF01507 Phosphoadenosine phosphosulfate reductase family KFF03_RS07525 PF00009 Elongation factor Tu GTP binding domain KFF03_RS07535 PF01551 Peptidase family M23 KFF03_RS07535 PF10145 Phage-related minor tail protein KFF03_RS07535 PF01464 Transglycosylase SLT domain KFF03_RS07540 PF03129 Anticodon binding domain KFF03_RS07540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KFF03_RS07540 PF04073 Aminoacyl-tRNA editing domain KFF03_RS07550 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KFF03_RS07550 PF10414 Sirohaem synthase dimerisation region KFF03_RS07550 PF14824 Sirohaem biosynthesis protein central KFF03_RS07555 PF04324 BFD-like [2Fe-2S] binding domain KFF03_RS07555 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KFF03_RS07555 PF01568 Molydopterin dinucleotide binding domain KFF03_RS07555 PF00384 Molybdopterin oxidoreductase KFF03_RS07560 PF00072 Response regulator receiver domain KFF03_RS07560 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS07565 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KFF03_RS07565 PF04324 BFD-like [2Fe-2S] binding domain KFF03_RS07565 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF03_RS07565 PF18267 Rubredoxin NAD+ reductase C-terminal domain KFF03_RS07565 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KFF03_RS07570 PF13806 Rieske-like [2Fe-2S] domain KFF03_RS07575 PF07690 Major Facilitator Superfamily KFF03_RS07580 PF00069 Protein kinase domain KFF03_RS07580 PF03793 PASTA domain KFF03_RS07585 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KFF03_RS07585 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF03_RS07585 PF18267 Rubredoxin NAD+ reductase C-terminal domain KFF03_RS07585 PF04324 BFD-like [2Fe-2S] binding domain KFF03_RS07585 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KFF03_RS07595 PF00005 ABC transporter KFF03_RS07600 PF00528 Binding-protein-dependent transport system inner membrane component KFF03_RS07610 PF00005 ABC transporter KFF03_RS07615 PF03861 ANTAR domain KFF03_RS07615 PF08376 Nitrate and nitrite sensing KFF03_RS07620 PF11842 Domain of unknown function (DUF3362) KFF03_RS07620 PF04055 Radical SAM superfamily KFF03_RS07620 PF08497 Radical SAM N-terminal KFF03_RS07630 PF05362 Lon protease (S16) C-terminal proteolytic domain KFF03_RS07630 PF13654 AAA domain KFF03_RS07635 PF01402 Ribbon-helix-helix protein, copG family KFF03_RS07645 PF12170 DNA polymerase III tau subunit V interacting with alpha KFF03_RS07645 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KFF03_RS07645 PF12169 DNA polymerase III subunits gamma and tau domain III KFF03_RS07650 PF02575 YbaB/EbfC DNA-binding family KFF03_RS07655 PF13662 Toprim domain KFF03_RS07655 PF02132 RecR protein KFF03_RS07660 PF01612 3'-5' exonuclease KFF03_RS07660 PF00570 HRDC domain KFF03_RS07665 PF05166 YcgL domain KFF03_RS07670 PF03692 Putative zinc- or iron-chelating domain KFF03_RS07690 PF17862 AAA+ lid domain KFF03_RS07690 PF01434 Peptidase family M41 KFF03_RS07690 PF00004 ATPase family associated with various cellular activities (AAA) KFF03_RS07765 PF00005 ABC transporter KFF03_RS07765 PF17845 FbpC C-terminal regulatory nucleotide binding domain KFF03_RS07770 PF00528 Binding-protein-dependent transport system inner membrane component KFF03_RS07775 PF13416 Bacterial extracellular solute-binding protein KFF03_RS07785 PF00155 Aminotransferase class I and II KFF03_RS07790 PF01641 SelR domain KFF03_RS07795 PF00255 Glutathione peroxidase KFF03_RS07800 PF01047 MarR family KFF03_RS07845 PF00005 ABC transporter KFF03_RS07850 PF01061 ABC-2 type transporter KFF03_RS07855 PF14489 QueF-like protein KFF03_RS07855 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KFF03_RS07860 PF00211 Adenylate and Guanylate cyclase catalytic domain KFF03_RS07860 PF00072 Response regulator receiver domain KFF03_RS07865 PF00881 Nitroreductase family KFF03_RS07885 PF00749 tRNA synthetases class I (E and Q), catalytic domain KFF03_RS07890 PF00501 AMP-binding enzyme KFF03_RS07890 PF13193 AMP-binding enzyme C-terminal domain KFF03_RS07890 PF16177 Acetyl-coenzyme A synthetase N-terminus KFF03_RS07900 PF00582 Universal stress protein family KFF03_RS07905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS07910 PF00330 Aconitase family (aconitate hydratase) KFF03_RS07915 PF00694 Aconitase C-terminal domain KFF03_RS07920 PF00180 Isocitrate/isopropylmalate dehydrogenase KFF03_RS07925 PF01118 Semialdehyde dehydrogenase, NAD binding domain KFF03_RS07925 PF02774 Semialdehyde dehydrogenase, dimerisation domain KFF03_RS07935 PF01416 tRNA pseudouridine synthase KFF03_RS07940 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KFF03_RS07945 PF00291 Pyridoxal-phosphate dependent enzyme KFF03_RS07950 PF00290 Tryptophan synthase alpha chain KFF03_RS07955 PF08245 Mur ligase middle domain KFF03_RS07955 PF02875 Mur ligase family, glutamate ligase domain KFF03_RS07965 PF02674 Colicin V production protein KFF03_RS07970 PF00156 Phosphoribosyl transferase domain KFF03_RS07975 PF01053 Cys/Met metabolism PLP-dependent enzyme KFF03_RS07980 PF07726 ATPase family associated with various cellular activities (AAA) KFF03_RS07980 PF17863 AAA lid domain KFF03_RS07990 PF13559 Domain of unknown function (DUF4129) KFF03_RS07990 PF11992 Domain of unknown function (DUF3488) KFF03_RS07990 PF01841 Transglutaminase-like superfamily KFF03_RS07995 PF07963 Prokaryotic N-terminal methylation motif KFF03_RS07995 PF00114 Pilin (bacterial filament) KFF03_RS08005 PF00085 Thioredoxin KFF03_RS08010 PF00248 Aldo/keto reductase family KFF03_RS08015 PF01554 MatE KFF03_RS08020 PF00589 Phage integrase family KFF03_RS08050 PF00717 Peptidase S24-like KFF03_RS08055 PF13438 Domain of unknown function (DUF4113) KFF03_RS08055 PF00817 impB/mucB/samB family KFF03_RS08055 PF11799 impB/mucB/samB family C-terminal domain KFF03_RS08055 PF11798 IMS family HHH motif KFF03_RS08065 PF14659 Phage integrase, N-terminal SAM-like domain KFF03_RS08065 PF00589 Phage integrase family KFF03_RS08075 PF06480 FtsH Extracellular KFF03_RS08075 PF01434 Peptidase family M41 KFF03_RS08075 PF00004 ATPase family associated with various cellular activities (AAA) KFF03_RS08075 PF17862 AAA+ lid domain KFF03_RS08080 PF13086 AAA domain KFF03_RS08080 PF13087 AAA domain KFF03_RS08080 PF13195 Protein of unknown function (DUF4011) KFF03_RS08165 PF08534 Redoxin KFF03_RS08165 PF00462 Glutaredoxin KFF03_RS08170 PF04315 Elongation factor P hydroxylase KFF03_RS08175 PF00271 Helicase conserved C-terminal domain KFF03_RS08175 PF00270 DEAD/DEAH box helicase KFF03_RS08200 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS08200 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS08200 PF00563 EAL domain KFF03_RS08205 PF03150 Di-haem cytochrome c peroxidase KFF03_RS08205 PF00034 Cytochrome c KFF03_RS08210 PF00012 Hsp70 protein KFF03_RS08225 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KFF03_RS08235 PF06434 Aconitate hydratase 2 N-terminus KFF03_RS08235 PF11791 Aconitate B N-terminal domain KFF03_RS08235 PF00330 Aconitase family (aconitate hydratase) KFF03_RS08240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KFF03_RS08240 PF01568 Molydopterin dinucleotide binding domain KFF03_RS08240 PF00384 Molybdopterin oxidoreductase KFF03_RS08245 PF02508 Rnf-Nqr subunit, membrane protein KFF03_RS08250 PF04205 FMN-binding domain KFF03_RS08255 PF03116 NQR2, RnfD, RnfE family KFF03_RS08260 PF13375 RnfC Barrel sandwich hybrid domain KFF03_RS08260 PF10531 SLBB domain KFF03_RS08260 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KFF03_RS08260 PF12838 4Fe-4S dicluster domain KFF03_RS08265 PF04060 Putative Fe-S cluster KFF03_RS08270 PF02508 Rnf-Nqr subunit, membrane protein KFF03_RS08275 PF10609 NUBPL iron-transfer P-loop NTPase KFF03_RS08280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KFF03_RS08280 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF03_RS08285 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS08285 PF00989 PAS fold KFF03_RS08285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS08290 PF00873 AcrB/AcrD/AcrF family KFF03_RS08300 PF00849 RNA pseudouridylate synthase KFF03_RS08320 PF03692 Putative zinc- or iron-chelating domain KFF03_RS08325 PF17200 Single Cache domain 2 KFF03_RS08325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS08325 PF00672 HAMP domain KFF03_RS08330 PF01784 NIF3 (NGG1p interacting factor 3) KFF03_RS08335 PF09297 NADH pyrophosphatase zinc ribbon domain KFF03_RS08335 PF00293 NUDIX domain KFF03_RS08345 PF00293 NUDIX domain KFF03_RS08350 PF00132 Bacterial transferase hexapeptide (six repeats) KFF03_RS08360 PF01370 NAD dependent epimerase/dehydratase family KFF03_RS08360 PF02222 ATP-grasp domain KFF03_RS08365 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS08365 PF07694 5TMR of 5TMR-LYT KFF03_RS08380 PF18693 TRAM domain KFF03_RS08380 PF04055 Radical SAM superfamily KFF03_RS08380 PF00919 Uncharacterized protein family UPF0004 KFF03_RS08400 PF06629 MltA-interacting protein MipA KFF03_RS08420 PF00664 ABC transporter transmembrane region KFF03_RS08420 PF00005 ABC transporter KFF03_RS08425 PF01367 5'-3' exonuclease, C-terminal SAM fold KFF03_RS08425 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KFF03_RS08430 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KFF03_RS08445 PF00291 Pyridoxal-phosphate dependent enzyme KFF03_RS08455 PF01219 Prokaryotic diacylglycerol kinase KFF03_RS08465 PF00793 DAHP synthetase I family KFF03_RS08480 PF01925 Sulfite exporter TauE/SafE KFF03_RS08485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS08485 PF03466 LysR substrate binding domain KFF03_RS08490 PF12111 Polyribonucleotide phosphorylase C terminal KFF03_RS08490 PF10150 Ribonuclease E/G family KFF03_RS08490 PF00575 S1 RNA binding domain KFF03_RS08500 PF00849 RNA pseudouridylate synthase KFF03_RS08500 PF01479 S4 domain KFF03_RS08505 PF13419 Haloacid dehalogenase-like hydrolase KFF03_RS08510 PF01343 Peptidase family S49 KFF03_RS08515 PF02620 Large ribosomal RNA subunit accumulation protein YceD KFF03_RS08520 PF01783 Ribosomal L32p protein family KFF03_RS08525 PF02504 Fatty acid synthesis protein KFF03_RS08530 PF00698 Acyl transferase domain KFF03_RS08540 PF00550 Phosphopantetheine attachment site KFF03_RS08545 PF00109 Beta-ketoacyl synthase, N-terminal domain KFF03_RS08545 PF02801 Beta-ketoacyl synthase, C-terminal domain KFF03_RS08550 PF01063 Amino-transferase class IV KFF03_RS08555 PF02618 YceG-like family KFF03_RS08560 PF02223 Thymidylate kinase KFF03_RS08565 PF09115 DNA polymerase III, delta subunit, C terminal KFF03_RS08575 PF00266 Aminotransferase class-V KFF03_RS08580 PF05193 Peptidase M16 inactive domain KFF03_RS08580 PF00675 Insulinase (Peptidase family M16) KFF03_RS08580 PF08367 Peptidase M16C associated KFF03_RS08590 PF01618 MotA/TolQ/ExbB proton channel family KFF03_RS08595 PF01618 MotA/TolQ/ExbB proton channel family KFF03_RS08600 PF02472 Biopolymer transport protein ExbD/TolR KFF03_RS08605 PF03544 Gram-negative bacterial TonB protein C-terminal KFF03_RS08625 PF03466 LysR substrate binding domain KFF03_RS08625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS08635 PF02417 Chromate transporter KFF03_RS08675 PF00581 Rhodanese-like domain KFF03_RS08675 PF17773 UPF0176 acylphosphatase like domain KFF03_RS08690 PF00106 short chain dehydrogenase KFF03_RS08695 PF03600 Citrate transporter KFF03_RS08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS08700 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS08700 PF00672 HAMP domain KFF03_RS08705 PF00486 Transcriptional regulatory protein, C terminal KFF03_RS08705 PF00072 Response regulator receiver domain KFF03_RS08725 PF00388 Phosphatidylinositol-specific phospholipase C, X domain KFF03_RS08755 PF00171 Aldehyde dehydrogenase family KFF03_RS08765 PF08264 Anticodon-binding domain of tRNA KFF03_RS08765 PF00133 tRNA synthetases class I (I, L, M and V) KFF03_RS08765 PF10458 Valyl tRNA synthetase tRNA binding arm KFF03_RS08780 PF13847 Methyltransferase domain KFF03_RS08785 PF07687 Peptidase dimerisation domain KFF03_RS08785 PF01546 Peptidase family M20/M25/M40 KFF03_RS08790 PF14572 Phosphoribosyl synthetase-associated domain KFF03_RS08790 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KFF03_RS08810 PF02321 Outer membrane efflux protein KFF03_RS08820 PF00873 AcrB/AcrD/AcrF family KFF03_RS08835 PF01740 STAS domain KFF03_RS08835 PF00916 Sulfate permease family KFF03_RS08840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF03_RS08840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF03_RS08840 PF11890 Domain of unknown function (DUF3410) KFF03_RS08845 PF12697 Alpha/beta hydrolase family KFF03_RS08855 PF04371 Porphyromonas-type peptidyl-arginine deiminase KFF03_RS08860 PF02687 FtsX-like permease family KFF03_RS08860 PF12704 MacB-like periplasmic core domain KFF03_RS08865 PF00005 ABC transporter KFF03_RS08875 PF00753 Metallo-beta-lactamase superfamily KFF03_RS08875 PF03772 Competence protein KFF03_RS08875 PF13567 Domain of unknown function (DUF4131) KFF03_RS08880 PF01618 MotA/TolQ/ExbB proton channel family KFF03_RS08885 PF02472 Biopolymer transport protein ExbD/TolR KFF03_RS08890 PF00664 ABC transporter transmembrane region KFF03_RS08890 PF00005 ABC transporter KFF03_RS08895 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KFF03_RS08900 PF03966 Trm112p-like protein KFF03_RS08905 PF01451 Low molecular weight phosphotyrosine protein phosphatase KFF03_RS08910 PF01565 FAD binding domain KFF03_RS08910 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KFF03_RS08915 PF03372 Endonuclease/Exonuclease/phosphatase family KFF03_RS08925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS08925 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS08925 PF00989 PAS fold KFF03_RS08925 PF08447 PAS fold KFF03_RS08935 PF01476 LysM domain KFF03_RS08935 PF01464 Transglycosylase SLT domain KFF03_RS08945 PF00929 Exonuclease KFF03_RS08950 PF06450 Bacterial Na+/H+ antiporter B (NhaB) KFF03_RS08965 PF02568 Thiamine biosynthesis protein (ThiI) KFF03_RS08965 PF02926 THUMP domain KFF03_RS08970 PF00106 short chain dehydrogenase KFF03_RS08985 PF00005 ABC transporter KFF03_RS08985 PF03459 TOBE domain KFF03_RS08990 PF00528 Binding-protein-dependent transport system inner membrane component KFF03_RS09000 PF00271 Helicase conserved C-terminal domain KFF03_RS09000 PF12137 RNA polymerase recycling family C-terminal KFF03_RS09000 PF00176 SNF2 family N-terminal domain KFF03_RS09000 PF18339 RapA N-terminal Tudor like domain 1 KFF03_RS09000 PF18337 RapA N-terminal Tudor like domain KFF03_RS09015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KFF03_RS09015 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF03_RS09030 PF03934 Type II secretion system (T2SS), protein K KFF03_RS09035 PF07963 Prokaryotic N-terminal methylation motif KFF03_RS09035 PF11612 Type II secretion system (T2SS), protein J KFF03_RS09040 PF02501 Type II secretion system (T2SS), protein I KFF03_RS09040 PF07963 Prokaryotic N-terminal methylation motif KFF03_RS09045 PF07963 Prokaryotic N-terminal methylation motif KFF03_RS09045 PF12019 Type II transport protein GspH KFF03_RS09050 PF08334 Type II secretion system (T2SS), protein G KFF03_RS09050 PF07963 Prokaryotic N-terminal methylation motif KFF03_RS09055 PF00482 Type II secretion system (T2SS), protein F KFF03_RS09060 PF00437 Type II/IV secretion system protein KFF03_RS09065 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KFF03_RS09065 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KFF03_RS09065 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KFF03_RS09070 PF01012 Electron transfer flavoprotein domain KFF03_RS09070 PF00766 Electron transfer flavoprotein FAD-binding domain KFF03_RS09075 PF01012 Electron transfer flavoprotein domain KFF03_RS09085 PF00043 Glutathione S-transferase, C-terminal domain KFF03_RS09085 PF02798 Glutathione S-transferase, N-terminal domain KFF03_RS09105 PF13356 Arm DNA-binding domain KFF03_RS09105 PF00589 Phage integrase family KFF03_RS09120 PF05840 Bacteriophage replication gene A protein (GPA) KFF03_RS09150 PF01066 CDP-alcohol phosphatidyltransferase KFF03_RS09155 PF01541 GIY-YIG catalytic domain KFF03_RS09155 PF02151 UvrB/uvrC motif KFF03_RS09155 PF08459 UvrC Helix-hairpin-helix N-terminal KFF03_RS09160 PF00196 Bacterial regulatory proteins, luxR family KFF03_RS09160 PF00072 Response regulator receiver domain KFF03_RS09165 PF13607 Succinyl-CoA ligase like flavodoxin domain KFF03_RS09165 PF00583 Acetyltransferase (GNAT) family KFF03_RS09165 PF13380 CoA binding domain KFF03_RS09170 PF00850 Histone deacetylase domain KFF03_RS09180 PF02635 DsrE/DsrF-like family KFF03_RS09185 PF04358 DsrC like protein KFF03_RS09195 PF00672 HAMP domain KFF03_RS09195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS09200 PF14824 Sirohaem biosynthesis protein central KFF03_RS09200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KFF03_RS09200 PF10414 Sirohaem synthase dimerisation region KFF03_RS09205 PF02403 Seryl-tRNA synthetase N-terminal domain KFF03_RS09205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KFF03_RS09210 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KFF03_RS09215 PF00004 ATPase family associated with various cellular activities (AAA) KFF03_RS09215 PF16193 AAA C-terminal domain KFF03_RS09215 PF12002 MgsA AAA+ ATPase C terminal KFF03_RS09220 PF03548 Outer membrane lipoprotein carrier protein LolA KFF03_RS09230 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KFF03_RS09235 PF04377 Arginine-tRNA-protein transferase, C terminus KFF03_RS09235 PF04376 Arginine-tRNA-protein transferase, N terminus KFF03_RS09240 PF01176 Translation initiation factor 1A / IF-1 KFF03_RS09245 PF00004 ATPase family associated with various cellular activities (AAA) KFF03_RS09245 PF07724 AAA domain (Cdc48 subfamily) KFF03_RS09245 PF10431 C-terminal, D2-small domain, of ClpB protein KFF03_RS09245 PF02861 Clp amino terminal domain, pathogenicity island component KFF03_RS09245 PF17871 AAA lid domain KFF03_RS09250 PF02617 ATP-dependent Clp protease adaptor protein ClpS KFF03_RS09260 PF03971 Monomeric isocitrate dehydrogenase KFF03_RS09265 PF00849 RNA pseudouridylate synthase KFF03_RS09270 PF00293 NUDIX domain KFF03_RS09280 PF04356 Protein of unknown function (DUF489) KFF03_RS09285 PF01207 Dihydrouridine synthase (Dus) KFF03_RS09295 PF00923 Transaldolase/Fructose-6-phosphate aldolase KFF03_RS09325 PF01136 Peptidase family U32 KFF03_RS09325 PF16325 Peptidase family U32 C-terminal domain KFF03_RS09330 PF05494 MlaC protein KFF03_RS09335 PF00849 RNA pseudouridylate synthase KFF03_RS09365 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KFF03_RS09365 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KFF03_RS09375 PF00072 Response regulator receiver domain KFF03_RS09375 PF00158 Sigma-54 interaction domain KFF03_RS09375 PF02954 Bacterial regulatory protein, Fis family KFF03_RS09395 PF01106 NifU-like domain KFF03_RS09395 PF01521 Iron-sulphur cluster biosynthesis KFF03_RS09400 PF00809 Pterin binding enzyme KFF03_RS09400 PF02574 Homocysteine S-methyltransferase KFF03_RS09400 PF02607 B12 binding domain KFF03_RS09400 PF02965 Vitamin B12 dependent methionine synthase, activation domain KFF03_RS09400 PF02310 B12 binding domain KFF03_RS09405 PF01554 MatE KFF03_RS09410 PF03009 Glycerophosphoryl diester phosphodiesterase family KFF03_RS09415 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KFF03_RS09415 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KFF03_RS09425 PF00999 Sodium/hydrogen exchanger family KFF03_RS09425 PF02254 TrkA-N domain KFF03_RS09430 PF00388 Phosphatidylinositol-specific phospholipase C, X domain KFF03_RS09445 PF02310 B12 binding domain KFF03_RS09445 PF01642 Methylmalonyl-CoA mutase KFF03_RS09455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KFF03_RS09455 PF00289 Biotin carboxylase, N-terminal domain KFF03_RS09455 PF02785 Biotin carboxylase C-terminal domain KFF03_RS09460 PF01039 Carboxyl transferase domain KFF03_RS09465 PF03737 Aldolase/RraA KFF03_RS09470 PF13460 NAD(P)H-binding KFF03_RS09480 PF00391 PEP-utilising enzyme, mobile domain KFF03_RS09480 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KFF03_RS09480 PF02896 PEP-utilising enzyme, TIM barrel domain KFF03_RS09485 PF03618 Kinase/pyrophosphorylase KFF03_RS09520 PF00425 chorismate binding enzyme KFF03_RS09520 PF04715 Anthranilate synthase component I, N terminal region KFF03_RS09530 PF01507 Phosphoadenosine phosphosulfate reductase family KFF03_RS09535 PF00563 EAL domain KFF03_RS09535 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS09535 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS09540 PF02355 Protein export membrane protein KFF03_RS09540 PF07549 SecD/SecF GG Motif KFF03_RS09545 PF07549 SecD/SecF GG Motif KFF03_RS09545 PF13721 SecD export protein N-terminal TM region KFF03_RS09545 PF02355 Protein export membrane protein KFF03_RS09550 PF02699 Preprotein translocase subunit KFF03_RS09555 PF01702 Queuine tRNA-ribosyltransferase KFF03_RS09560 PF02547 Queuosine biosynthesis protein KFF03_RS09580 PF00672 HAMP domain KFF03_RS09580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS09580 PF17202 Single cache domain 3 KFF03_RS09595 PF00578 AhpC/TSA family KFF03_RS09610 PF02424 ApbE family KFF03_RS09615 PF01425 Amidase KFF03_RS09625 PF13538 UvrD-like helicase C-terminal domain KFF03_RS09630 PF12705 PD-(D/E)XK nuclease superfamily KFF03_RS09630 PF00580 UvrD/REP helicase N-terminal domain KFF03_RS09630 PF13361 UvrD-like helicase C-terminal domain KFF03_RS09635 PF17946 RecC C-terminal domain KFF03_RS09640 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KFF03_RS09640 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KFF03_RS09650 PF00672 HAMP domain KFF03_RS09650 PF12729 Four helix bundle sensory module for signal transduction KFF03_RS09650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS09655 PF00107 Zinc-binding dehydrogenase KFF03_RS09660 PF08496 Peptidase family S49 N-terminal KFF03_RS09660 PF01343 Peptidase family S49 KFF03_RS09670 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF03_RS09670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KFF03_RS09680 PF02424 ApbE family KFF03_RS09700 PF05175 Methyltransferase small domain KFF03_RS09705 PF09186 Domain of unknown function (DUF1949) KFF03_RS09705 PF01205 Uncharacterized protein family UPF0029 KFF03_RS09710 PF13145 PPIC-type PPIASE domain KFF03_RS09720 PF00216 Bacterial DNA-binding protein KFF03_RS09725 PF00004 ATPase family associated with various cellular activities (AAA) KFF03_RS09725 PF05362 Lon protease (S16) C-terminal proteolytic domain KFF03_RS09725 PF02190 ATP-dependent protease La (LON) substrate-binding domain KFF03_RS09730 PF07724 AAA domain (Cdc48 subfamily) KFF03_RS09730 PF10431 C-terminal, D2-small domain, of ClpB protein KFF03_RS09730 PF06689 ClpX C4-type zinc finger KFF03_RS09735 PF00574 Clp protease KFF03_RS09740 PF05698 Bacterial trigger factor protein (TF) C-terminus KFF03_RS09740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KFF03_RS09740 PF05697 Bacterial trigger factor protein (TF) KFF03_RS09760 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KFF03_RS09760 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KFF03_RS09765 PF16363 GDP-mannose 4,6 dehydratase KFF03_RS09770 PF13439 Glycosyltransferase Family 4 KFF03_RS09770 PF00534 Glycosyl transferases group 1 KFF03_RS09775 PF01933 Uncharacterised protein family UPF0052 KFF03_RS09780 PF00072 Response regulator receiver domain KFF03_RS09780 PF00158 Sigma-54 interaction domain KFF03_RS09780 PF02954 Bacterial regulatory protein, Fis family KFF03_RS09785 PF00158 Sigma-54 interaction domain KFF03_RS09785 PF00072 Response regulator receiver domain KFF03_RS09790 PF00672 HAMP domain KFF03_RS09790 PF00072 Response regulator receiver domain KFF03_RS09790 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KFF03_RS09790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS09790 PF01627 Hpt domain KFF03_RS09790 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS09810 PF01740 STAS domain KFF03_RS09820 PF13439 Glycosyltransferase Family 4 KFF03_RS09820 PF00534 Glycosyl transferases group 1 KFF03_RS09825 PF00535 Glycosyl transferase family 2 KFF03_RS09840 PF01336 OB-fold nucleic acid binding domain KFF03_RS09840 PF02938 GAD domain KFF03_RS09840 PF00152 tRNA synthetases class II (D, K and N) KFF03_RS09845 PF00106 short chain dehydrogenase KFF03_RS09850 PF00216 Bacterial DNA-binding protein KFF03_RS09855 PF03167 Uracil DNA glycosylase superfamily KFF03_RS09870 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KFF03_RS09870 PF12833 Helix-turn-helix domain KFF03_RS09875 PF00753 Metallo-beta-lactamase superfamily KFF03_RS09875 PF16123 Hydroxyacylglutathione hydrolase C-terminus KFF03_RS09900 PF00529 HlyD membrane-fusion protein of T1SS KFF03_RS09900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KFF03_RS09905 PF00873 AcrB/AcrD/AcrF family KFF03_RS09925 PF01381 Helix-turn-helix KFF03_RS09930 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system KFF03_RS09935 PF00710 Asparaginase, N-terminal KFF03_RS09935 PF17763 Glutaminase/Asparaginase C-terminal domain KFF03_RS09945 PF03831 PhnA domain KFF03_RS09945 PF08274 PhnA Zinc-Ribbon KFF03_RS09985 PF16363 GDP-mannose 4,6 dehydratase KFF03_RS09995 PF02397 Bacterial sugar transferase KFF03_RS10035 PF01380 SIS domain KFF03_RS10060 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS10060 PF00072 Response regulator receiver domain KFF03_RS10065 PF01406 tRNA synthetases class I (C) catalytic domain KFF03_RS10065 PF09190 DALR domain KFF03_RS10070 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KFF03_RS10070 PF00749 tRNA synthetases class I (E and Q), catalytic domain KFF03_RS10075 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KFF03_RS10080 PF12850 Calcineurin-like phosphoesterase superfamily domain KFF03_RS10090 PF00563 EAL domain KFF03_RS10090 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS10090 PF05231 MASE1 KFF03_RS10090 PF08447 PAS fold KFF03_RS10090 PF08448 PAS fold KFF03_RS10090 PF13426 PAS domain KFF03_RS10095 PF04333 MlaA lipoprotein KFF03_RS10100 PF07681 DoxX KFF03_RS10110 PF05114 Protein of unknown function (DUF692) KFF03_RS10120 PF00271 Helicase conserved C-terminal domain KFF03_RS10120 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KFF03_RS10120 PF04408 Helicase associated domain (HA2) KFF03_RS10120 PF00270 DEAD/DEAH box helicase KFF03_RS10120 PF11898 Domain of unknown function (DUF3418) KFF03_RS10125 PF00501 AMP-binding enzyme KFF03_RS10125 PF13193 AMP-binding enzyme C-terminal domain KFF03_RS10135 PF01575 MaoC like domain KFF03_RS10145 PF00291 Pyridoxal-phosphate dependent enzyme KFF03_RS10155 PF01965 DJ-1/PfpI family KFF03_RS10155 PF12833 Helix-turn-helix domain KFF03_RS10160 PF00109 Beta-ketoacyl synthase, N-terminal domain KFF03_RS10160 PF02801 Beta-ketoacyl synthase, C-terminal domain KFF03_RS10165 PF01040 UbiA prenyltransferase family KFF03_RS10190 PF00510 Cytochrome c oxidase subunit III KFF03_RS10195 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 KFF03_RS10200 PF00115 Cytochrome C and Quinol oxidase polypeptide I KFF03_RS10205 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KFF03_RS10205 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KFF03_RS10215 PF08264 Anticodon-binding domain of tRNA KFF03_RS10215 PF00133 tRNA synthetases class I (I, L, M and V) KFF03_RS10215 PF10458 Valyl tRNA synthetase tRNA binding arm KFF03_RS10225 PF06733 DEAD_2 KFF03_RS10225 PF13307 Helicase C-terminal domain KFF03_RS10230 PF16537 Type II secretion system protein B KFF03_RS10235 PF13401 AAA domain KFF03_RS10235 PF01471 Putative peptidoglycan binding domain KFF03_RS10250 PF09339 IclR helix-turn-helix domain KFF03_RS10250 PF01614 Bacterial transcriptional regulator KFF03_RS10255 PF00171 Aldehyde dehydrogenase family KFF03_RS10260 PF00465 Iron-containing alcohol dehydrogenase KFF03_RS10265 PF00378 Enoyl-CoA hydratase/isomerase KFF03_RS10270 PF02515 CoA-transferase family III KFF03_RS10275 PF01274 Malate synthase KFF03_RS10300 PF08328 Adenylosuccinate lyase C-terminal KFF03_RS10300 PF00206 Lyase KFF03_RS10305 PF08007 Cupin superfamily protein KFF03_RS10310 PF13673 Acetyltransferase (GNAT) domain KFF03_RS10315 PF02348 Cytidylyltransferase KFF03_RS10320 PF01370 NAD dependent epimerase/dehydratase family KFF03_RS10340 PF01027 Inhibitor of apoptosis-promoting Bax1 KFF03_RS10350 PF00501 AMP-binding enzyme KFF03_RS10360 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KFF03_RS10360 PF01266 FAD dependent oxidoreductase KFF03_RS10370 PF06794 Uncharacterised protein family (UPF0270) KFF03_RS10380 PF00561 alpha/beta hydrolase fold KFF03_RS10380 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus KFF03_RS10395 PF12832 MFS_1 like family KFF03_RS10400 PF01264 Chorismate synthase KFF03_RS10405 PF05175 Methyltransferase small domain KFF03_RS10410 PF01734 Patatin-like phospholipase KFF03_RS10445 PF03631 Virulence factor BrkB KFF03_RS10450 PF03960 ArsC family KFF03_RS10455 PF03358 NADPH-dependent FMN reductase KFF03_RS10465 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ KFF03_RS10475 PF03739 Lipopolysaccharide export system permease LptF/LptG KFF03_RS10480 PF03739 Lipopolysaccharide export system permease LptF/LptG KFF03_RS10485 PF00883 Cytosol aminopeptidase family, catalytic domain KFF03_RS10485 PF02789 Cytosol aminopeptidase family, N-terminal domain KFF03_RS10495 PF01863 Protein of unknown function DUF45 KFF03_RS10505 PF00271 Helicase conserved C-terminal domain KFF03_RS10505 PF00270 DEAD/DEAH box helicase KFF03_RS10510 PF00255 Glutathione peroxidase KFF03_RS10520 PF00860 Permease family KFF03_RS10525 PF00156 Phosphoribosyl transferase domain KFF03_RS10530 PF04245 37-kD nucleoid-associated bacterial protein KFF03_RS10535 PF00899 ThiF family KFF03_RS10550 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KFF03_RS10555 PF01171 PP-loop family KFF03_RS10565 PF03449 Transcription elongation factor, N-terminal KFF03_RS10565 PF01272 Transcription elongation factor, GreA/GreB, C-term KFF03_RS10575 PF00549 CoA-ligase KFF03_RS10575 PF02629 CoA binding domain KFF03_RS10580 PF00549 CoA-ligase KFF03_RS10580 PF08442 ATP-grasp domain KFF03_RS10585 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF03_RS10585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KFF03_RS10590 PF02817 e3 binding domain KFF03_RS10590 PF00364 Biotin-requiring enzyme KFF03_RS10590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KFF03_RS10595 PF00676 Dehydrogenase E1 component KFF03_RS10595 PF02779 Transketolase, pyrimidine binding domain KFF03_RS10595 PF16078 2-oxoglutarate dehydrogenase N-terminus KFF03_RS10595 PF16870 2-oxoglutarate dehydrogenase C-terminal KFF03_RS10600 PF13085 2Fe-2S iron-sulfur cluster binding domain KFF03_RS10605 PF00890 FAD binding domain KFF03_RS10605 PF02910 Fumarate reductase flavoprotein C-term KFF03_RS10610 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KFF03_RS10615 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KFF03_RS10620 PF00285 Citrate synthase, C-terminal domain KFF03_RS10630 PF03476 MOSC N-terminal beta barrel domain KFF03_RS10630 PF03473 MOSC domain KFF03_RS10630 PF00111 2Fe-2S iron-sulfur cluster binding domain KFF03_RS10640 PF01584 CheW-like domain KFF03_RS10640 PF00072 Response regulator receiver domain KFF03_RS10645 PF00563 EAL domain KFF03_RS10645 PF08668 HDOD domain KFF03_RS10650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KFF03_RS10650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KFF03_RS10655 PF01266 FAD dependent oxidoreductase KFF03_RS10655 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KFF03_RS10665 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KFF03_RS10665 PF12833 Helix-turn-helix domain KFF03_RS10670 PF00753 Metallo-beta-lactamase superfamily KFF03_RS10675 PF00270 DEAD/DEAH box helicase KFF03_RS10675 PF00271 Helicase conserved C-terminal domain KFF03_RS10680 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KFF03_RS10690 PF00535 Glycosyl transferase family 2 KFF03_RS10695 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase KFF03_RS10710 PF00109 Beta-ketoacyl synthase, N-terminal domain KFF03_RS10710 PF02801 Beta-ketoacyl synthase, C-terminal domain KFF03_RS10715 PF02785 Biotin carboxylase C-terminal domain KFF03_RS10715 PF00289 Biotin carboxylase, N-terminal domain KFF03_RS10715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KFF03_RS10775 PF07963 Prokaryotic N-terminal methylation motif KFF03_RS10775 PF00114 Pilin (bacterial filament) KFF03_RS10785 PF02540 NAD synthase KFF03_RS10785 PF00117 Glutamine amidotransferase class-I KFF03_RS10785 PF00958 GMP synthase C terminal domain KFF03_RS10790 PF00478 IMP dehydrogenase / GMP reductase domain KFF03_RS10790 PF00571 CBS domain KFF03_RS10795 PF12146 Serine aminopeptidase, S33 KFF03_RS10795 PF11647 Membrane Localization Domain KFF03_RS10795 PF11713 Peptidase C80 family KFF03_RS10795 PF07634 RtxA repeat KFF03_RS10795 PF16671 Actin cross-linking domain KFF03_RS10810 PF02601 Exonuclease VII, large subunit KFF03_RS10810 PF13742 OB-fold nucleic acid binding domain KFF03_RS10815 PF01476 LysM domain KFF03_RS10815 PF01551 Peptidase family M23 KFF03_RS10825 PF11871 Domain of unknown function (DUF3391) KFF03_RS10825 PF01966 HD domain KFF03_RS10840 PF05958 tRNA (Uracil-5-)-methyltransferase KFF03_RS10845 PF03880 DbpA RNA binding domain KFF03_RS10845 PF00270 DEAD/DEAH box helicase KFF03_RS10845 PF00271 Helicase conserved C-terminal domain KFF03_RS10850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KFF03_RS10850 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF03_RS10870 PF01925 Sulfite exporter TauE/SafE KFF03_RS10875 PF00800 Prephenate dehydratase KFF03_RS10875 PF01817 Chorismate mutase type II KFF03_RS10880 PF00485 Phosphoribulokinase / Uridine kinase family KFF03_RS10920 PF12833 Helix-turn-helix domain KFF03_RS10935 PF00226 DnaJ domain KFF03_RS10935 PF01556 DnaJ C terminal domain KFF03_RS10935 PF00684 DnaJ central domain KFF03_RS10960 PF01852 START domain KFF03_RS10965 PF01722 BolA-like protein KFF03_RS10980 PF01926 50S ribosome-binding GTPase KFF03_RS10995 PF00563 EAL domain KFF03_RS10995 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS10995 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS11000 PF00378 Enoyl-CoA hydratase/isomerase KFF03_RS11010 PF00571 CBS domain KFF03_RS11010 PF01595 Cyclin M transmembrane N-terminal domain KFF03_RS11020 PF03883 Peroxide stress protein YaaA KFF03_RS11030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF03_RS11030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF03_RS11030 PF02770 Acyl-CoA dehydrogenase, middle domain KFF03_RS11035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF03_RS11035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF03_RS11035 PF02770 Acyl-CoA dehydrogenase, middle domain KFF03_RS11040 PF13193 AMP-binding enzyme C-terminal domain KFF03_RS11040 PF00501 AMP-binding enzyme KFF03_RS11050 PF00731 AIR carboxylase KFF03_RS11055 PF02222 ATP-grasp domain KFF03_RS11055 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KFF03_RS11060 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) KFF03_RS11065 PF01883 Iron-sulfur cluster assembly protein KFF03_RS11120 PF00202 Aminotransferase class-III KFF03_RS11125 PF13302 Acetyltransferase (GNAT) domain KFF03_RS11125 PF00027 Cyclic nucleotide-binding domain KFF03_RS11155 PF00128 Alpha amylase, catalytic domain KFF03_RS11160 PF01081 KDPG and KHG aldolase KFF03_RS11165 PF00920 Dehydratase family KFF03_RS11170 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KFF03_RS11175 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KFF03_RS11175 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KFF03_RS11180 PF00483 Nucleotidyl transferase KFF03_RS11200 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KFF03_RS11200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KFF03_RS11225 PF01263 Aldose 1-epimerase KFF03_RS11235 PF03466 LysR substrate binding domain KFF03_RS11235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS11240 PF01253 Translation initiation factor SUI1 KFF03_RS11245 PF00497 Bacterial extracellular solute-binding proteins, family 3 KFF03_RS11245 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS11245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS11250 PF01758 Sodium Bile acid symporter family KFF03_RS11255 PF01037 Lrp/AsnC ligand binding domain KFF03_RS11260 PF08502 LeuA allosteric (dimerisation) domain KFF03_RS11260 PF00682 HMGL-like KFF03_RS11270 PF18081 Fanconi anemia-associated nuclease SAP domain KFF03_RS11270 PF08774 VRR-NUC domain KFF03_RS11305 PF03372 Endonuclease/Exonuclease/phosphatase family KFF03_RS11310 PF00171 Aldehyde dehydrogenase family KFF03_RS11315 PF00465 Iron-containing alcohol dehydrogenase KFF03_RS11330 PF12833 Helix-turn-helix domain KFF03_RS11330 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KFF03_RS11335 PF12833 Helix-turn-helix domain KFF03_RS11335 PF12852 Cupin KFF03_RS11340 PF00175 Oxidoreductase NAD-binding domain KFF03_RS11340 PF00970 Oxidoreductase FAD-binding domain KFF03_RS11340 PF00111 2Fe-2S iron-sulfur cluster binding domain KFF03_RS11345 PF02508 Rnf-Nqr subunit, membrane protein KFF03_RS11350 PF02508 Rnf-Nqr subunit, membrane protein KFF03_RS11355 PF04205 FMN-binding domain KFF03_RS11360 PF03116 NQR2, RnfD, RnfE family KFF03_RS11365 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) KFF03_RS11365 PF11973 NQRA C-terminal domain KFF03_RS11370 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KFF03_RS11370 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KFF03_RS11380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS11380 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS11380 PF00989 PAS fold KFF03_RS11390 PF00486 Transcriptional regulatory protein, C terminal KFF03_RS11390 PF00072 Response regulator receiver domain KFF03_RS11395 PF00691 OmpA family KFF03_RS11405 PF02470 MlaD protein KFF03_RS11410 PF04403 Paraquat-inducible protein A KFF03_RS11420 PF00463 Isocitrate lyase family KFF03_RS11425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS11425 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS11435 PF00072 Response regulator receiver domain KFF03_RS11435 PF00158 Sigma-54 interaction domain KFF03_RS11435 PF02954 Bacterial regulatory protein, Fis family KFF03_RS11475 PF00158 Sigma-54 interaction domain KFF03_RS11475 PF01590 GAF domain KFF03_RS11480 PF12801 4Fe-4S binding domain KFF03_RS11480 PF13746 4Fe-4S dicluster domain KFF03_RS11480 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase KFF03_RS11500 PF01048 Phosphorylase superfamily KFF03_RS11505 PF00933 Glycosyl hydrolase family 3 N terminal domain KFF03_RS11510 PF03734 L,D-transpeptidase catalytic domain KFF03_RS11510 PF01476 LysM domain KFF03_RS11515 PF00440 Bacterial regulatory proteins, tetR family KFF03_RS11520 PF01726 LexA DNA binding domain KFF03_RS11520 PF00717 Peptidase S24-like KFF03_RS11545 PF00183 Hsp90 protein KFF03_RS11550 PF00209 Sodium:neurotransmitter symporter family KFF03_RS11555 PF00892 EamA-like transporter family KFF03_RS11560 PF02581 Thiamine monophosphate synthase KFF03_RS11565 PF05690 Thiazole biosynthesis protein ThiG KFF03_RS11575 PF01266 FAD dependent oxidoreductase KFF03_RS11580 PF13667 ThiC-associated domain KFF03_RS11580 PF01964 Radical SAM ThiC family KFF03_RS11595 PF13419 Haloacid dehalogenase-like hydrolase KFF03_RS11600 PF01966 HD domain KFF03_RS11605 PF00266 Aminotransferase class-V KFF03_RS11620 PF14552 Tautomerase enzyme KFF03_RS11635 PF07702 UTRA domain KFF03_RS11635 PF00392 Bacterial regulatory proteins, gntR family KFF03_RS11645 PF01266 FAD dependent oxidoreductase KFF03_RS11655 PF01758 Sodium Bile acid symporter family KFF03_RS11665 PF00474 Sodium:solute symporter family KFF03_RS11670 PF02253 Phospholipase A1 KFF03_RS11680 PF00970 Oxidoreductase FAD-binding domain KFF03_RS11680 PF00175 Oxidoreductase NAD-binding domain KFF03_RS11685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS11685 PF03466 LysR substrate binding domain KFF03_RS11705 PF03819 MazG nucleotide pyrophosphohydrolase domain KFF03_RS11710 PF04607 Region found in RelA / SpoT proteins KFF03_RS11710 PF13291 ACT domain KFF03_RS11710 PF02824 TGS domain KFF03_RS11715 PF05958 tRNA (Uracil-5-)-methyltransferase KFF03_RS11720 PF00291 Pyridoxal-phosphate dependent enzyme KFF03_RS11725 PF00672 HAMP domain KFF03_RS11725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS11725 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS11725 PF01627 Hpt domain KFF03_RS11725 PF00072 Response regulator receiver domain KFF03_RS11725 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KFF03_RS11730 PF01648 4'-phosphopantetheinyl transferase superfamily KFF03_RS11735 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KFF03_RS11740 PF11967 Recombination protein O N terminal KFF03_RS11740 PF02565 Recombination protein O C terminal KFF03_RS11745 PF07650 KH domain KFF03_RS11745 PF01926 50S ribosome-binding GTPase KFF03_RS11750 PF00035 Double-stranded RNA binding motif KFF03_RS11750 PF14622 Ribonuclease-III-like KFF03_RS11760 PF06421 GTP-binding protein LepA C-terminus KFF03_RS11760 PF00679 Elongation factor G C-terminus KFF03_RS11760 PF00009 Elongation factor Tu GTP binding domain KFF03_RS11760 PF03144 Elongation factor Tu domain 2 KFF03_RS11765 PF13180 PDZ domain KFF03_RS11775 PF03888 MucB/RseB N-terminal domain KFF03_RS11775 PF17188 MucB/RseB C-terminal domain KFF03_RS11780 PF03873 Anti sigma-E protein RseA, C-terminal domain KFF03_RS11780 PF03872 Anti sigma-E protein RseA, N-terminal domain KFF03_RS11785 PF04542 Sigma-70 region 2 KFF03_RS11785 PF08281 Sigma-70, region 4 KFF03_RS11790 PF00890 FAD binding domain KFF03_RS11790 PF02910 Fumarate reductase flavoprotein C-term KFF03_RS11800 PF03937 Flavinator of succinate dehydrogenase KFF03_RS11805 PF01571 Aminomethyltransferase folate-binding domain KFF03_RS11825 PF00561 alpha/beta hydrolase fold KFF03_RS11825 PF00364 Biotin-requiring enzyme KFF03_RS11830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS11830 PF08447 PAS fold KFF03_RS11845 PF01980 tRNA-methyltransferase O KFF03_RS11845 PF18389 TrmO C-terminal domain KFF03_RS11850 PF05724 Thiopurine S-methyltransferase (TPMT) KFF03_RS11855 PF01189 16S rRNA methyltransferase RsmB/F KFF03_RS11855 PF01029 NusB family KFF03_RS11860 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KFF03_RS11870 PF12833 Helix-turn-helix domain KFF03_RS11870 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KFF03_RS11875 PF01557 Fumarylacetoacetate (FAA) hydrolase family KFF03_RS11890 PF00890 FAD binding domain KFF03_RS11915 PF00849 RNA pseudouridylate synthase KFF03_RS11945 PF01494 FAD binding domain KFF03_RS11970 PF00873 AcrB/AcrD/AcrF family KFF03_RS11975 PF13533 Biotin-lipoyl like KFF03_RS11980 PF08003 Protein of unknown function (DUF1698) KFF03_RS11985 PF13649 Methyltransferase domain KFF03_RS11990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS11990 PF03466 LysR substrate binding domain KFF03_RS12025 PF00669 Bacterial flagellin N-terminal helical region KFF03_RS12030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KFF03_RS12030 PF00460 Flagella basal body rod protein KFF03_RS12035 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KFF03_RS12035 PF10135 Rod binding protein KFF03_RS12050 PF02119 Flagellar P-ring protein KFF03_RS12055 PF02107 Flagellar L-ring protein KFF03_RS12060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KFF03_RS12060 PF00460 Flagella basal body rod protein KFF03_RS12065 PF00460 Flagella basal body rod protein KFF03_RS12065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KFF03_RS12070 PF07559 Flagellar basal body protein FlaE KFF03_RS12070 PF00460 Flagella basal body rod protein KFF03_RS12070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KFF03_RS12075 PF13861 FlgD Tudor-like domain KFF03_RS12075 PF13860 FlgD Ig-like domain KFF03_RS12075 PF03963 Flagellar hook capping protein - N-terminal region KFF03_RS12080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KFF03_RS12080 PF00460 Flagella basal body rod protein KFF03_RS12085 PF00460 Flagella basal body rod protein KFF03_RS12090 PF03705 CheR methyltransferase, all-alpha domain KFF03_RS12090 PF01739 CheR methyltransferase, SAM binding domain KFF03_RS12095 PF01584 CheW-like domain KFF03_RS12095 PF00072 Response regulator receiver domain KFF03_RS12125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KFF03_RS12125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KFF03_RS12125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KFF03_RS12125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KFF03_RS12130 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS12135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF03_RS12135 PF02770 Acyl-CoA dehydrogenase, middle domain KFF03_RS12135 PF12806 Acetyl-CoA dehydrogenase C-terminal like KFF03_RS12135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF03_RS12140 PF13193 AMP-binding enzyme C-terminal domain KFF03_RS12140 PF00501 AMP-binding enzyme KFF03_RS12145 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KFF03_RS12145 PF12833 Helix-turn-helix domain KFF03_RS12150 PF00487 Fatty acid desaturase KFF03_RS12160 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS12160 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS12160 PF00563 EAL domain KFF03_RS12170 PF07152 YaeQ protein KFF03_RS12190 PF00072 Response regulator receiver domain KFF03_RS12190 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS12190 PF01627 Hpt domain KFF03_RS12190 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KFF03_RS12190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS12190 PF00672 HAMP domain KFF03_RS12200 PF00486 Transcriptional regulatory protein, C terminal KFF03_RS12200 PF00072 Response regulator receiver domain KFF03_RS12210 PF05193 Peptidase M16 inactive domain KFF03_RS12210 PF16187 Middle or third domain of peptidase_M16 KFF03_RS12210 PF00675 Insulinase (Peptidase family M16) KFF03_RS12225 PF05114 Protein of unknown function (DUF692) KFF03_RS12255 PF00892 EamA-like transporter family KFF03_RS12270 PF01368 DHH family KFF03_RS12270 PF02272 DHHA1 domain KFF03_RS12270 PF17768 RecJ OB domain KFF03_RS12275 PF14743 DNA ligase OB-like domain KFF03_RS12275 PF01068 ATP dependent DNA ligase domain KFF03_RS12290 PF01804 Penicillin amidase KFF03_RS12315 PF10431 C-terminal, D2-small domain, of ClpB protein KFF03_RS12315 PF02861 Clp amino terminal domain, pathogenicity island component KFF03_RS12315 PF17871 AAA lid domain KFF03_RS12315 PF07724 AAA domain (Cdc48 subfamily) KFF03_RS12315 PF00004 ATPase family associated with various cellular activities (AAA) KFF03_RS12325 PF03466 LysR substrate binding domain KFF03_RS12325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS12335 PF03572 Peptidase family S41 KFF03_RS12335 PF17804 Tail specific protease N-terminal domain KFF03_RS12335 PF11818 C-terminal domain of tail specific protease (DUF3340) KFF03_RS12335 PF00595 PDZ domain KFF03_RS12350 PF13638 PIN domain KFF03_RS12350 PF02562 PhoH-like protein KFF03_RS12365 PF00487 Fatty acid desaturase KFF03_RS12370 PF00175 Oxidoreductase NAD-binding domain KFF03_RS12370 PF00970 Oxidoreductase FAD-binding domain KFF03_RS12370 PF00111 2Fe-2S iron-sulfur cluster binding domain KFF03_RS12375 PF11742 Protein of unknown function (DUF3302) KFF03_RS12380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KFF03_RS12385 PF03881 Fructosamine kinase KFF03_RS12395 PF04261 Dyp-type peroxidase family KFF03_RS12400 PF01565 FAD binding domain KFF03_RS12400 PF09330 D-lactate dehydrogenase, membrane binding KFF03_RS12405 PF02589 LUD domain KFF03_RS12410 PF11870 Domain of unknown function (DUF3390) KFF03_RS12410 PF02589 LUD domain KFF03_RS12410 PF13183 4Fe-4S dicluster domain KFF03_RS12415 PF02754 Cysteine-rich domain KFF03_RS12420 PF07729 FCD domain KFF03_RS12420 PF00392 Bacterial regulatory proteins, gntR family KFF03_RS12430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS12430 PF03466 LysR substrate binding domain KFF03_RS12445 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KFF03_RS12445 PF02817 e3 binding domain KFF03_RS12445 PF00364 Biotin-requiring enzyme KFF03_RS12450 PF00456 Transketolase, thiamine diphosphate binding domain KFF03_RS12450 PF17831 Pyruvate dehydrogenase E1 component middle domain KFF03_RS12455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KFF03_RS12455 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KFF03_RS12475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KFF03_RS12500 PF00580 UvrD/REP helicase N-terminal domain KFF03_RS12500 PF13361 UvrD-like helicase C-terminal domain KFF03_RS12510 PF00579 tRNA synthetases class I (W and Y) KFF03_RS12525 PF01300 Telomere recombination KFF03_RS12530 PF02811 PHP domain KFF03_RS12535 PF03795 YCII-related domain KFF03_RS12545 PF01458 Uncharacterized protein family (UPF0051) KFF03_RS12550 PF00005 ABC transporter KFF03_RS12555 PF01458 Uncharacterized protein family (UPF0051) KFF03_RS12560 PF00266 Aminotransferase class-V KFF03_RS12565 PF01521 Iron-sulphur cluster biosynthesis KFF03_RS12600 PF02743 Cache domain KFF03_RS12600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS12600 PF00672 HAMP domain KFF03_RS12605 PF03150 Di-haem cytochrome c peroxidase KFF03_RS12605 PF00034 Cytochrome c KFF03_RS12610 PF01906 Putative heavy-metal-binding KFF03_RS12615 PF01906 Putative heavy-metal-binding KFF03_RS12625 PF00672 HAMP domain KFF03_RS12625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS12625 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS12625 PF16750 Sensor domain of 2-component histidine kinase KFF03_RS12630 PF00072 Response regulator receiver domain KFF03_RS12630 PF00486 Transcriptional regulatory protein, C terminal KFF03_RS12635 PF07715 TonB-dependent Receptor Plug Domain KFF03_RS12635 PF00593 TonB dependent receptor KFF03_RS12640 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF03_RS12660 PF16655 PhoD-like phosphatase, N-terminal domain KFF03_RS12660 PF09423 PhoD-like phosphatase KFF03_RS12680 PF00005 ABC transporter KFF03_RS12685 PF00497 Bacterial extracellular solute-binding proteins, family 3 KFF03_RS12690 PF00528 Binding-protein-dependent transport system inner membrane component KFF03_RS12695 PF00528 Binding-protein-dependent transport system inner membrane component KFF03_RS12705 PF03544 Gram-negative bacterial TonB protein C-terminal KFF03_RS12710 PF02472 Biopolymer transport protein ExbD/TolR KFF03_RS12715 PF01618 MotA/TolQ/ExbB proton channel family KFF03_RS12720 PF01618 MotA/TolQ/ExbB proton channel family KFF03_RS12740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS12740 PF03466 LysR substrate binding domain KFF03_RS12750 PF00005 ABC transporter KFF03_RS12750 PF00664 ABC transporter transmembrane region KFF03_RS12765 PF06039 Malate:quinone oxidoreductase (Mqo) KFF03_RS12780 PF00072 Response regulator receiver domain KFF03_RS12780 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS12780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS12780 PF09456 RcsC Alpha-Beta-Loop (ABL) KFF03_RS12785 PF00196 Bacterial regulatory proteins, luxR family KFF03_RS12785 PF00072 Response regulator receiver domain KFF03_RS12790 PF16177 Acetyl-coenzyme A synthetase N-terminus KFF03_RS12790 PF00501 AMP-binding enzyme KFF03_RS12790 PF13193 AMP-binding enzyme C-terminal domain KFF03_RS12820 PF04972 BON domain KFF03_RS12820 PF00691 OmpA family KFF03_RS12830 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KFF03_RS12830 PF01926 50S ribosome-binding GTPase KFF03_RS12835 PF13360 PQQ-like domain KFF03_RS12840 PF09976 Tetratricopeptide repeat-like domain KFF03_RS12845 PF13393 Histidyl-tRNA synthetase KFF03_RS12845 PF03129 Anticodon binding domain KFF03_RS12850 PF04551 GcpE protein KFF03_RS12860 PF04055 Radical SAM superfamily KFF03_RS12865 PF00334 Nucleoside diphosphate kinase KFF03_RS12870 PF00266 Aminotransferase class-V KFF03_RS12875 PF02082 Transcriptional regulator KFF03_RS12880 PF00132 Bacterial transferase hexapeptide (six repeats) KFF03_RS12885 PF00588 SpoU rRNA Methylase family KFF03_RS12890 PF00459 Inositol monophosphatase family KFF03_RS12895 PF00313 'Cold-shock' DNA-binding domain KFF03_RS12900 PF04102 SlyX KFF03_RS12915 PF00005 ABC transporter KFF03_RS12920 PF01553 Acyltransferase KFF03_RS12925 PF04445 Putative SAM-dependent methyltransferase KFF03_RS12930 PF02673 Bacitracin resistance protein BacA KFF03_RS12935 PF00814 Glycoprotease family KFF03_RS12945 PF05191 Adenylate kinase, active site lid KFF03_RS12950 PF00311 Phosphoenolpyruvate carboxylase KFF03_RS12955 PF00764 Arginosuccinate synthase KFF03_RS12960 PF00691 OmpA family KFF03_RS12965 PF01979 Amidohydrolase family KFF03_RS12970 PF00929 Exonuclease KFF03_RS12975 PF06062 Uncharacterised protein family (UPF0231) KFF03_RS12990 PF01171 PP-loop family KFF03_RS12990 PF09179 TilS substrate binding domain KFF03_RS12990 PF11734 TilS substrate C-terminal domain KFF03_RS12995 PF07733 Bacterial DNA polymerase III alpha NTPase domain KFF03_RS12995 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KFF03_RS12995 PF14579 Helix-hairpin-helix motif KFF03_RS12995 PF02811 PHP domain KFF03_RS12995 PF01336 OB-fold nucleic acid binding domain KFF03_RS13025 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit KFF03_RS13030 PF00682 HMGL-like KFF03_RS13030 PF02436 Conserved carboxylase domain KFF03_RS13030 PF00364 Biotin-requiring enzyme KFF03_RS13035 PF04277 Oxaloacetate decarboxylase, gamma chain KFF03_RS13040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS13040 PF03466 LysR substrate binding domain KFF03_RS13045 PF00171 Aldehyde dehydrogenase family KFF03_RS13050 PF00465 Iron-containing alcohol dehydrogenase KFF03_RS13055 PF02515 CoA-transferase family III KFF03_RS13060 PF02028 BCCT, betaine/carnitine/choline family transporter KFF03_RS13070 PF01207 Dihydrouridine synthase (Dus) KFF03_RS13075 PF00793 DAHP synthetase I family KFF03_RS13085 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS13085 PF00072 Response regulator receiver domain KFF03_RS13090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS13090 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS13090 PF18415 Histidine kinase receptor ArcB trans-membrane domain KFF03_RS13090 PF01627 Hpt domain KFF03_RS13090 PF00989 PAS fold KFF03_RS13090 PF00072 Response regulator receiver domain KFF03_RS13095 PF13458 Periplasmic binding protein KFF03_RS13100 PF02653 Branched-chain amino acid transport system / permease component KFF03_RS13100 PF11862 Domain of unknown function (DUF3382) KFF03_RS13110 PF00005 ABC transporter KFF03_RS13115 PF00005 ABC transporter KFF03_RS13120 PF03069 Acetamidase/Formamidase family KFF03_RS13130 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KFF03_RS13130 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KFF03_RS13140 PF01026 TatD related DNase KFF03_RS13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS13145 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS13145 PF09308 LuxQ, periplasmic KFF03_RS13145 PF00072 Response regulator receiver domain KFF03_RS13160 PF00719 Inorganic pyrophosphatase KFF03_RS13165 PF13426 PAS domain KFF03_RS13165 PF01740 STAS domain KFF03_RS13170 PF13411 MerR HTH family regulatory protein KFF03_RS13170 PF02607 B12 binding domain KFF03_RS13170 PF02310 B12 binding domain KFF03_RS13175 PF05175 Methyltransferase small domain KFF03_RS13175 PF08468 Methyltransferase small domain N-terminal KFF03_RS13185 PF07690 Major Facilitator Superfamily KFF03_RS13185 PF00083 Sugar (and other) transporter KFF03_RS13190 PF02675 S-adenosylmethionine decarboxylase KFF03_RS13195 PF02566 OsmC-like protein KFF03_RS13200 PF00027 Cyclic nucleotide-binding domain KFF03_RS13200 PF13545 Crp-like helix-turn-helix domain KFF03_RS13205 PF11849 Domain of unknown function (DUF3369) KFF03_RS13225 PF02441 Flavoprotein KFF03_RS13230 PF01225 Mur ligase family, catalytic domain KFF03_RS13230 PF02875 Mur ligase family, glutamate ligase domain KFF03_RS13230 PF08245 Mur ligase middle domain KFF03_RS13235 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KFF03_RS13240 PF07195 Flagellar hook-associated protein 2 C-terminus KFF03_RS13240 PF02465 Flagellar hook-associated protein 2 N-terminus KFF03_RS13240 PF07196 Flagellin hook IN motif KFF03_RS13250 PF00669 Bacterial flagellin N-terminal helical region KFF03_RS13250 PF00700 Bacterial flagellin C-terminal helical region KFF03_RS13250 PF00700 Bacterial flagellin C-terminal helical region KFF03_RS13250 PF00669 Bacterial flagellin N-terminal helical region KFF03_RS13255 PF06039 Malate:quinone oxidoreductase (Mqo) KFF03_RS13260 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KFF03_RS13260 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KFF03_RS13265 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KFF03_RS13270 PF02233 NAD(P) transhydrogenase beta subunit KFF03_RS13275 PF07715 TonB-dependent Receptor Plug Domain KFF03_RS13275 PF07660 Secretin and TonB N terminus short domain KFF03_RS13275 PF00593 TonB dependent receptor KFF03_RS13300 PF00462 Glutaredoxin KFF03_RS13305 PF02646 RmuC family KFF03_RS13310 PF13419 Haloacid dehalogenase-like hydrolase KFF03_RS13315 PF00834 Ribulose-phosphate 3 epimerase family KFF03_RS13345 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KFF03_RS13345 PF00591 Glycosyl transferase family, a/b domain KFF03_RS13345 PF02885 Glycosyl transferase family, helical bundle domain KFF03_RS13350 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KFF03_RS13350 PF00753 Metallo-beta-lactamase superfamily KFF03_RS13350 PF10996 Beta-Casp domain KFF03_RS13365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS13365 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS13365 PF01627 Hpt domain KFF03_RS13365 PF00072 Response regulator receiver domain KFF03_RS13365 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KFF03_RS13365 PF00672 HAMP domain KFF03_RS13370 PF02881 SRP54-type protein, helical bundle domain KFF03_RS13370 PF00448 SRP54-type protein, GTPase domain KFF03_RS13370 PF02978 Signal peptide binding domain KFF03_RS13380 PF03471 Transporter associated domain KFF03_RS13380 PF01595 Cyclin M transmembrane N-terminal domain KFF03_RS13380 PF00571 CBS domain KFF03_RS13385 PF09334 tRNA synthetases class I (M) KFF03_RS13385 PF01588 Putative tRNA binding domain KFF03_RS13400 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KFF03_RS13410 PF00929 Exonuclease KFF03_RS13415 PF03193 RsgA GTPase KFF03_RS13420 PF13677 Membrane MotB of proton-channel complex MotA/MotB KFF03_RS13420 PF00691 OmpA family KFF03_RS13425 PF01618 MotA/TolQ/ExbB proton channel family KFF03_RS13435 PF00581 Rhodanese-like domain KFF03_RS13440 PF02666 Phosphatidylserine decarboxylase KFF03_RS13445 PF00152 tRNA synthetases class II (D, K and N) KFF03_RS13450 PF01132 Elongation factor P (EF-P) OB domain KFF03_RS13450 PF08207 Elongation factor P (EF-P) KOW-like domain KFF03_RS13450 PF09285 Elongation factor P, C-terminal KFF03_RS13455 PF04055 Radical SAM superfamily KFF03_RS13505 PF00881 Nitroreductase family KFF03_RS13510 PF03466 LysR substrate binding domain KFF03_RS13510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS13520 PF17760 UvrA interaction domain KFF03_RS13520 PF17755 UvrA DNA-binding domain KFF03_RS13525 PF00196 Bacterial regulatory proteins, luxR family KFF03_RS13530 PF07690 Major Facilitator Superfamily KFF03_RS13535 PF00436 Single-strand binding protein family KFF03_RS13540 PF01557 Fumarylacetoacetate (FAA) hydrolase family KFF03_RS13550 PF00005 ABC transporter KFF03_RS13550 PF12848 ABC transporter KFF03_RS13555 PF00563 EAL domain KFF03_RS13555 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS13555 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS13560 PF00497 Bacterial extracellular solute-binding proteins, family 3 KFF03_RS13565 PF00464 Serine hydroxymethyltransferase KFF03_RS13575 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KFF03_RS13575 PF14850 DNA-binding domain of Proline dehydrogenase KFF03_RS13575 PF00171 Aldehyde dehydrogenase family KFF03_RS13575 PF01619 Proline dehydrogenase KFF03_RS13580 PF00474 Sodium:solute symporter family KFF03_RS13605 PF03477 ATP cone domain KFF03_RS13610 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KFF03_RS13610 PF01872 RibD C-terminal domain KFF03_RS13615 PF00677 Lumazine binding domain KFF03_RS13620 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KFF03_RS13620 PF00925 GTP cyclohydrolase II KFF03_RS13625 PF00885 6,7-dimethyl-8-ribityllumazine synthase KFF03_RS13630 PF01029 NusB family KFF03_RS13635 PF02769 AIR synthase related protein, C-terminal domain KFF03_RS13635 PF00586 AIR synthase related protein, N-terminal domain KFF03_RS13640 PF00873 AcrB/AcrD/AcrF family KFF03_RS13645 PF00529 HlyD membrane-fusion protein of T1SS KFF03_RS13645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KFF03_RS13655 PF04247 Invasion gene expression up-regulator, SirB KFF03_RS13660 PF02580 D-Tyr-tRNA(Tyr) deacylase KFF03_RS13670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS13670 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS13670 PF00989 PAS fold KFF03_RS13675 PF02954 Bacterial regulatory protein, Fis family KFF03_RS13675 PF00072 Response regulator receiver domain KFF03_RS13675 PF00158 Sigma-54 interaction domain KFF03_RS13700 PF07963 Prokaryotic N-terminal methylation motif KFF03_RS13715 PF00482 Type II secretion system (T2SS), protein F KFF03_RS13720 PF00437 Type II/IV secretion system protein KFF03_RS13730 PF01471 Putative peptidoglycan binding domain KFF03_RS13730 PF13401 AAA domain KFF03_RS13735 PF00263 Bacterial type II and III secretion system protein KFF03_RS13735 PF03958 Bacterial type II/III secretion system short domain KFF03_RS13760 PF00588 SpoU rRNA Methylase family KFF03_RS13765 PF02556 Preprotein translocase subunit SecB KFF03_RS13770 PF00581 Rhodanese-like domain KFF03_RS13775 PF01676 Metalloenzyme superfamily KFF03_RS13775 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KFF03_RS13780 PF01551 Peptidase family M23 KFF03_RS13785 PF13180 PDZ domain KFF03_RS13785 PF03572 Peptidase family S41 KFF03_RS13790 PF04748 Divergent polysaccharide deacetylase KFF03_RS13805 PF02608 ABC transporter substrate-binding protein PnrA-like KFF03_RS13810 PF00563 EAL domain KFF03_RS13810 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS13810 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS13815 PF00155 Aminotransferase class I and II KFF03_RS13820 PF02657 Fe-S metabolism associated domain KFF03_RS13830 PF00639 PPIC-type PPIASE domain KFF03_RS13830 PF09312 SurA N-terminal domain KFF03_RS13855 PF01116 Fructose-bisphosphate aldolase class-II KFF03_RS13860 PF00162 Phosphoglycerate kinase KFF03_RS13865 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KFF03_RS13865 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KFF03_RS13870 PF00672 HAMP domain KFF03_RS13870 PF02743 Cache domain KFF03_RS13870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS13890 PF02599 Global regulator protein family KFF03_RS13895 PF00696 Amino acid kinase family KFF03_RS13895 PF01842 ACT domain KFF03_RS13895 PF13840 ACT domain KFF03_RS13900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KFF03_RS13900 PF01411 tRNA synthetases class II (A) KFF03_RS13900 PF02272 DHHA1 domain KFF03_RS13920 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF03_RS13925 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KFF03_RS13925 PF12833 Helix-turn-helix domain KFF03_RS13930 PF02631 RecX family KFF03_RS13935 PF00154 recA bacterial DNA recombination protein KFF03_RS13945 PF00037 4Fe-4S binding domain KFF03_RS13945 PF11953 Domain of unknown function (DUF3470) KFF03_RS13950 PF00140 Sigma-70 factor, region 1.2 KFF03_RS13950 PF04542 Sigma-70 region 2 KFF03_RS13950 PF04539 Sigma-70 region 3 KFF03_RS13950 PF04545 Sigma-70, region 4 KFF03_RS13955 PF01476 LysM domain KFF03_RS13955 PF01551 Peptidase family M23 KFF03_RS13970 PF01975 Survival protein SurE KFF03_RS13975 PF01142 tRNA pseudouridine synthase D (TruD) KFF03_RS13980 PF02542 YgbB family KFF03_RS13985 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KFF03_RS13990 PF04977 Septum formation initiator KFF03_RS13995 PF00113 Enolase, C-terminal TIM barrel domain KFF03_RS13995 PF03952 Enolase, N-terminal domain KFF03_RS14000 PF06418 CTP synthase N-terminus KFF03_RS14000 PF00117 Glutamine amidotransferase class-I KFF03_RS14005 PF00107 Zinc-binding dehydrogenase KFF03_RS14005 PF08240 Alcohol dehydrogenase GroES-like domain KFF03_RS14010 PF00691 OmpA family KFF03_RS14010 PF05736 OprF membrane domain KFF03_RS14020 PF01475 Ferric uptake regulator family KFF03_RS14025 PF04355 SmpA / OmlA family KFF03_RS14030 PF03658 RnfH family Ubiquitin KFF03_RS14035 PF03364 Polyketide cyclase / dehydrase and lipid transport KFF03_RS14040 PF00209 Sodium:neurotransmitter symporter family KFF03_RS14045 PF01668 SmpB protein KFF03_RS14060 PF08267 Cobalamin-independent synthase, N-terminal domain KFF03_RS14060 PF01717 Cobalamin-independent synthase, Catalytic domain KFF03_RS14070 PF07969 Amidohydrolase family KFF03_RS14075 PF00890 FAD binding domain KFF03_RS14080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KFF03_RS14080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KFF03_RS14085 PF17200 Single Cache domain 2 KFF03_RS14085 PF00672 HAMP domain KFF03_RS14085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS14090 PF00999 Sodium/hydrogen exchanger family KFF03_RS14090 PF02254 TrkA-N domain KFF03_RS14095 PF02525 Flavodoxin-like fold KFF03_RS14105 PF13409 Glutathione S-transferase, N-terminal domain KFF03_RS14110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS14110 PF03466 LysR substrate binding domain KFF03_RS14115 PF02678 Pirin KFF03_RS14115 PF17954 Quercetinase C-terminal cupin domain KFF03_RS14125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS14125 PF03466 LysR substrate binding domain KFF03_RS14130 PF01292 Prokaryotic cytochrome b561 KFF03_RS14140 PF00072 Response regulator receiver domain KFF03_RS14140 PF00196 Bacterial regulatory proteins, luxR family KFF03_RS14150 PF01483 Proprotein convertase P-domain KFF03_RS14150 PF00082 Subtilase family KFF03_RS14160 PF01425 Amidase KFF03_RS14165 PF00289 Biotin carboxylase, N-terminal domain KFF03_RS14165 PF02785 Biotin carboxylase C-terminal domain KFF03_RS14165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KFF03_RS14180 PF00005 ABC transporter KFF03_RS14180 PF08402 TOBE domain KFF03_RS14185 PF00528 Binding-protein-dependent transport system inner membrane component KFF03_RS14210 PF00743 Flavin-binding monooxygenase-like KFF03_RS14215 PF12833 Helix-turn-helix domain KFF03_RS14215 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KFF03_RS14220 PF00743 Flavin-binding monooxygenase-like KFF03_RS14225 PF02311 AraC-like ligand binding domain KFF03_RS14225 PF12833 Helix-turn-helix domain KFF03_RS14230 PF00141 Peroxidase KFF03_RS14235 PF08443 RimK-like ATP-grasp domain KFF03_RS14235 PF18030 RimK PreATP-grasp domain KFF03_RS14240 PF18030 RimK PreATP-grasp domain KFF03_RS14240 PF08443 RimK-like ATP-grasp domain KFF03_RS14250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS14250 PF03466 LysR substrate binding domain KFF03_RS14260 PF00743 Flavin-binding monooxygenase-like KFF03_RS14270 PF00171 Aldehyde dehydrogenase family KFF03_RS14275 PF03466 LysR substrate binding domain KFF03_RS14275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS14290 PF00171 Aldehyde dehydrogenase family KFF03_RS14300 PF07715 TonB-dependent Receptor Plug Domain KFF03_RS14305 PF07568 Histidine kinase KFF03_RS14305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS14305 PF12282 Signal transduction histidine kinase KFF03_RS14310 PF00072 Response regulator receiver domain KFF03_RS14320 PF02627 Carboxymuconolactone decarboxylase family KFF03_RS14345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KFF03_RS14345 PF02874 ATP synthase alpha/beta family, beta-barrel domain KFF03_RS14345 PF16886 ATPsynthase alpha/beta subunit N-term extension KFF03_RS14370 PF01813 ATP synthase subunit D KFF03_RS14375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KFF03_RS14375 PF02874 ATP synthase alpha/beta family, beta-barrel domain KFF03_RS14390 PF00072 Response regulator receiver domain KFF03_RS14400 PF00155 Aminotransferase class I and II KFF03_RS14405 PF03186 CobD/Cbib protein KFF03_RS14410 PF07685 CobB/CobQ-like glutamine amidotransferase domain KFF03_RS14410 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KFF03_RS14420 PF02654 Cobalamin-5-phosphate synthase KFF03_RS14430 PF02277 Phosphoribosyltransferase KFF03_RS14435 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KFF03_RS14445 PF00480 ROK family KFF03_RS14450 PF03186 CobD/Cbib protein KFF03_RS14450 PF17113 Regulatory signalling modulator protein AmpE KFF03_RS14455 PF01510 N-acetylmuramoyl-L-alanine amidase KFF03_RS14460 PF01235 Sodium:alanine symporter family KFF03_RS14465 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KFF03_RS14465 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KFF03_RS14485 PF00437 Type II/IV secretion system protein KFF03_RS14485 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KFF03_RS14490 PF00482 Type II secretion system (T2SS), protein F KFF03_RS14495 PF06750 Bacterial Peptidase A24 N-terminal domain KFF03_RS14495 PF01478 Type IV leader peptidase family KFF03_RS14500 PF01121 Dephospho-CoA kinase KFF03_RS14505 PF03884 DNA gyrase inhibitor YacG KFF03_RS14520 PF00563 EAL domain KFF03_RS14520 PF01590 GAF domain KFF03_RS14520 PF00989 PAS fold KFF03_RS14520 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS14530 PF07694 5TMR of 5TMR-LYT KFF03_RS14530 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS14535 PF01220 Dehydroquinase class II KFF03_RS14550 PF01207 Dihydrouridine synthase (Dus) KFF03_RS14555 PF02954 Bacterial regulatory protein, Fis family KFF03_RS14560 PF02142 MGS-like domain KFF03_RS14560 PF01808 AICARFT/IMPCHase bienzyme KFF03_RS14565 PF02843 Phosphoribosylglycinamide synthetase, C domain KFF03_RS14565 PF02844 Phosphoribosylglycinamide synthetase, N domain KFF03_RS14565 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KFF03_RS14570 PF18415 Histidine kinase receptor ArcB trans-membrane domain KFF03_RS14570 PF01627 Hpt domain KFF03_RS14570 PF00989 PAS fold KFF03_RS14570 PF00072 Response regulator receiver domain KFF03_RS14570 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS14570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS14575 PF01434 Peptidase family M41 KFF03_RS14575 PF17862 AAA+ lid domain KFF03_RS14575 PF00004 ATPase family associated with various cellular activities (AAA) KFF03_RS14580 PF03232 Ubiquinone biosynthesis protein COQ7 KFF03_RS14590 PF10369 Small subunit of acetolactate synthase KFF03_RS14595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KFF03_RS14595 PF00205 Thiamine pyrophosphate enzyme, central domain KFF03_RS14595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KFF03_RS14605 PF02578 Multi-copper polyphenol oxidoreductase laccase KFF03_RS14610 PF00849 RNA pseudouridylate synthase KFF03_RS14610 PF01479 S4 domain KFF03_RS14615 PF13525 Outer membrane lipoprotein KFF03_RS14625 PF00795 Carbon-nitrogen hydrolase KFF03_RS14625 PF02540 NAD synthase KFF03_RS14630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS14630 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS14635 PF02954 Bacterial regulatory protein, Fis family KFF03_RS14635 PF00158 Sigma-54 interaction domain KFF03_RS14635 PF00072 Response regulator receiver domain KFF03_RS14680 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor KFF03_RS14680 PF07963 Prokaryotic N-terminal methylation motif KFF03_RS14685 PF02401 LytB protein KFF03_RS14690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KFF03_RS14695 PF01252 Signal peptidase (SPase) II KFF03_RS14700 PF06827 Zinc finger found in FPG and IleRS KFF03_RS14700 PF08264 Anticodon-binding domain of tRNA KFF03_RS14700 PF00133 tRNA synthetases class I (I, L, M and V) KFF03_RS14705 PF06574 FAD synthetase KFF03_RS14705 PF01687 Riboflavin kinase KFF03_RS14710 PF03023 Lipid II flippase MurJ KFF03_RS14715 PF01649 Ribosomal protein S20 KFF03_RS14720 PF00793 DAHP synthetase I family KFF03_RS14725 PF00696 Amino acid kinase family KFF03_RS14725 PF01472 PUA domain KFF03_RS14730 PF01018 GTP1/OBG KFF03_RS14730 PF01926 50S ribosome-binding GTPase KFF03_RS14735 PF01016 Ribosomal L27 protein KFF03_RS14740 PF00829 Ribosomal prokaryotic L21 protein KFF03_RS14745 PF00348 Polyprenyl synthetase KFF03_RS14750 PF02683 Cytochrome C biogenesis protein transmembrane region KFF03_RS14750 PF11412 Disulphide bond corrector protein DsbC KFF03_RS14755 PF00085 Thioredoxin KFF03_RS14765 PF00756 Putative esterase KFF03_RS14770 PF08240 Alcohol dehydrogenase GroES-like domain KFF03_RS14770 PF00107 Zinc-binding dehydrogenase KFF03_RS14775 PF03466 LysR substrate binding domain KFF03_RS14775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS14785 PF00082 Subtilase family KFF03_RS14795 PF08281 Sigma-70, region 4 KFF03_RS14795 PF04542 Sigma-70 region 2 KFF03_RS14810 PF03009 Glycerophosphoryl diester phosphodiesterase family KFF03_RS14825 PF12833 Helix-turn-helix domain KFF03_RS14835 PF04055 Radical SAM superfamily KFF03_RS14840 PF03099 Biotin/lipoate A/B protein ligase family KFF03_RS14845 PF04359 Protein of unknown function (DUF493) KFF03_RS14850 PF07943 Penicillin-binding protein 5, C-terminal domain KFF03_RS14850 PF00768 D-alanyl-D-alanine carboxypeptidase KFF03_RS14860 PF00245 Alkaline phosphatase KFF03_RS14880 PF05159 Capsule polysaccharide biosynthesis protein KFF03_RS14885 PF05159 Capsule polysaccharide biosynthesis protein KFF03_RS14900 PF00535 Glycosyl transferase family 2 KFF03_RS14910 PF00535 Glycosyl transferase family 2 KFF03_RS14915 PF00459 Inositol monophosphatase family KFF03_RS14925 PF03600 Citrate transporter KFF03_RS14925 PF02080 TrkA-C domain KFF03_RS14930 PF16363 GDP-mannose 4,6 dehydratase KFF03_RS14945 PF14307 Glycosyltransferase WbsX KFF03_RS14945 PF05045 Rhamnan synthesis protein F KFF03_RS14950 PF16363 GDP-mannose 4,6 dehydratase KFF03_RS14955 PF04321 RmlD substrate binding domain KFF03_RS14960 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KFF03_RS14965 PF00483 Nucleotidyl transferase KFF03_RS14970 PF02563 Polysaccharide biosynthesis/export protein KFF03_RS14970 PF10531 SLBB domain KFF03_RS14980 PF00005 ABC transporter KFF03_RS14990 PF02810 SEC-C motif KFF03_RS15020 PF00171 Aldehyde dehydrogenase family KFF03_RS15025 PF01467 Cytidylyltransferase-like KFF03_RS15035 PF02590 Predicted SPOUT methyltransferase KFF03_RS15040 PF03717 Penicillin-binding Protein dimerisation domain KFF03_RS15040 PF00905 Penicillin binding protein transpeptidase domain KFF03_RS15045 PF01098 Cell cycle protein KFF03_RS15050 PF13406 Transglycosylase SLT domain KFF03_RS15055 PF03330 Lytic transglycolase KFF03_RS15055 PF05036 Sporulation related domain KFF03_RS15070 PF13439 Glycosyltransferase Family 4 KFF03_RS15070 PF00534 Glycosyl transferases group 1 KFF03_RS15080 PF00571 CBS domain KFF03_RS15110 PF03806 AbgT putative transporter family KFF03_RS15115 PF01266 FAD dependent oxidoreductase KFF03_RS15145 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KFF03_RS15145 PF12833 Helix-turn-helix domain KFF03_RS15150 PF13439 Glycosyltransferase Family 4 KFF03_RS15150 PF00534 Glycosyl transferases group 1 KFF03_RS15155 PF01569 PAP2 superfamily KFF03_RS15160 PF00817 impB/mucB/samB family KFF03_RS15160 PF11799 impB/mucB/samB family C-terminal domain KFF03_RS15160 PF11798 IMS family HHH motif KFF03_RS15170 PF00005 ABC transporter KFF03_RS15175 PF01032 FecCD transport family KFF03_RS15180 PF01497 Periplasmic binding protein KFF03_RS15185 PF05171 Haemin-degrading HemS.ChuX domain KFF03_RS15195 PF07715 TonB-dependent Receptor Plug Domain KFF03_RS15195 PF00593 TonB dependent receptor KFF03_RS15220 PF00258 Flavodoxin KFF03_RS15225 PF02492 CobW/HypB/UreG, nucleotide-binding domain KFF03_RS15225 PF07683 Cobalamin synthesis protein cobW C-terminal domain KFF03_RS15235 PF00005 ABC transporter KFF03_RS15240 PF13472 GDSL-like Lipase/Acylhydrolase family KFF03_RS15245 PF00563 EAL domain KFF03_RS15245 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS15245 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS15250 PF03280 Proteobacterial lipase chaperone protein KFF03_RS15255 PF00561 alpha/beta hydrolase fold KFF03_RS15260 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS15260 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS15260 PF00563 EAL domain KFF03_RS15270 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF03_RS15270 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KFF03_RS15275 PF00310 Glutamine amidotransferases class-II KFF03_RS15275 PF04898 Glutamate synthase central domain KFF03_RS15275 PF01645 Conserved region in glutamate synthase KFF03_RS15275 PF01493 GXGXG motif KFF03_RS15285 PF01761 3-dehydroquinate synthase KFF03_RS15290 PF01202 Shikimate kinase KFF03_RS15295 PF07660 Secretin and TonB N terminus short domain KFF03_RS15295 PF11741 AMIN domain KFF03_RS15295 PF00263 Bacterial type II and III secretion system protein KFF03_RS15295 PF03958 Bacterial type II/III secretion system short domain KFF03_RS15300 PF04351 Pilus assembly protein, PilP KFF03_RS15305 PF04350 Pilus assembly protein, PilO KFF03_RS15310 PF05137 Fimbrial assembly protein (PilN) KFF03_RS15315 PF11104 Type IV pilus assembly protein PilM; KFF03_RS15320 PF17092 Penicillin-binding protein OB-like domain KFF03_RS15320 PF00912 Transglycosylase KFF03_RS15320 PF00905 Penicillin binding protein transpeptidase domain KFF03_RS15325 PF02913 FAD linked oxidases, C-terminal domain KFF03_RS15325 PF01565 FAD binding domain KFF03_RS15330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KFF03_RS15330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KFF03_RS15335 PF00700 Bacterial flagellin C-terminal helical region KFF03_RS15335 PF00669 Bacterial flagellin N-terminal helical region KFF03_RS15340 PF00977 Histidine biosynthesis protein KFF03_RS15345 PF00117 Glutamine amidotransferase class-I KFF03_RS15350 PF00475 Imidazoleglycerol-phosphate dehydratase KFF03_RS15365 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS15365 PF00563 EAL domain KFF03_RS15365 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS15370 PF10576 Iron-sulfur binding domain of endonuclease III KFF03_RS15370 PF00633 Helix-hairpin-helix motif KFF03_RS15370 PF00730 HhH-GPD superfamily base excision DNA repair protein KFF03_RS15370 PF14815 NUDIX domain KFF03_RS15375 PF04362 Bacterial Fe(2+) trafficking KFF03_RS15385 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS15400 PF00270 DEAD/DEAH box helicase KFF03_RS15400 PF00271 Helicase conserved C-terminal domain KFF03_RS15400 PF16124 RecQ zinc-binding KFF03_RS15400 PF09382 RQC domain KFF03_RS15400 PF00570 HRDC domain KFF03_RS15410 PF00750 tRNA synthetases class I (R) KFF03_RS15410 PF05746 DALR anticodon binding domain KFF03_RS15410 PF03485 Arginyl tRNA synthetase N terminal domain KFF03_RS15420 PF00156 Phosphoribosyl transferase domain KFF03_RS15430 PF03725 3' exoribonuclease family, domain 2 KFF03_RS15430 PF01138 3' exoribonuclease family, domain 1 KFF03_RS15435 PF08340 Domain of unknown function (DUF1732) KFF03_RS15435 PF03755 YicC-like family, N-terminal region KFF03_RS15440 PF02743 Cache domain KFF03_RS15440 PF00672 HAMP domain KFF03_RS15440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS15450 PF13411 MerR HTH family regulatory protein KFF03_RS15455 PF03591 AzlC protein KFF03_RS15460 PF05437 Branched-chain amino acid transport protein (AzlD) KFF03_RS15470 PF00920 Dehydratase family KFF03_RS15500 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KFF03_RS15510 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS15510 PF00072 Response regulator receiver domain KFF03_RS15535 PF00497 Bacterial extracellular solute-binding proteins, family 3 KFF03_RS15540 PF05368 NmrA-like family KFF03_RS15545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS15545 PF03466 LysR substrate binding domain KFF03_RS15550 PF00296 Luciferase-like monooxygenase KFF03_RS15555 PF06832 Penicillin-Binding Protein C-terminus Family KFF03_RS15555 PF00912 Transglycosylase KFF03_RS15555 PF00905 Penicillin binding protein transpeptidase domain KFF03_RS15560 PF11974 Bacterial alpha-2-macroglobulin MG3 domain KFF03_RS15560 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain KFF03_RS15560 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain KFF03_RS15560 PF00207 Alpha-2-macroglobulin family KFF03_RS15560 PF01835 MG2 domain KFF03_RS15560 PF07703 Alpha-2-macroglobulin bait region domain KFF03_RS15560 PF17962 Bacterial macroglobulin domain 6 KFF03_RS15570 PF01914 MarC family integral membrane protein KFF03_RS15595 PF02525 Flavodoxin-like fold KFF03_RS15600 PF03466 LysR substrate binding domain KFF03_RS15600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KFF03_RS15610 PF06291 Bor protein KFF03_RS15615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS15615 PF08918 PhoQ Sensor KFF03_RS15620 PF00072 Response regulator receiver domain KFF03_RS15620 PF00486 Transcriptional regulatory protein, C terminal KFF03_RS15630 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS15635 PF02390 Putative methyltransferase KFF03_RS15640 PF00709 Adenylosuccinate synthetase KFF03_RS15645 PF13393 Histidyl-tRNA synthetase KFF03_RS15660 PF13302 Acetyltransferase (GNAT) domain KFF03_RS15660 PF03352 Methyladenine glycosylase KFF03_RS15660 PF00117 Glutamine amidotransferase class-I KFF03_RS15660 PF00958 GMP synthase C terminal domain KFF03_RS15660 PF13673 Acetyltransferase (GNAT) domain KFF03_RS15665 PF01145 SPFH domain / Band 7 family KFF03_RS15670 PF12221 Bacterial membrane protein N terminal KFF03_RS15670 PF01145 SPFH domain / Band 7 family KFF03_RS15675 PF01926 50S ribosome-binding GTPase KFF03_RS15675 PF16360 GTP-binding GTPase Middle Region KFF03_RS15675 PF13167 GTP-binding GTPase N-terminal KFF03_RS15685 PF17209 Hfq protein KFF03_RS15695 PF01119 DNA mismatch repair protein, C-terminal domain KFF03_RS15695 PF08676 MutL C terminal dimerisation domain KFF03_RS15700 PF01520 N-acetylmuramoyl-L-alanine amidase KFF03_RS15700 PF11741 AMIN domain KFF03_RS15705 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KFF03_RS15710 PF01256 Carbohydrate kinase KFF03_RS15710 PF03853 YjeF-related protein N-terminus KFF03_RS15715 PF08331 Domain of unknown function (DUF1730) KFF03_RS15720 PF01161 Phosphatidylethanolamine-binding protein KFF03_RS15730 PF08032 RNA 2'-O ribose methyltransferase substrate binding KFF03_RS15730 PF00588 SpoU rRNA Methylase family KFF03_RS15735 PF00672 HAMP domain KFF03_RS15735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS15735 PF02743 Cache domain KFF03_RS15740 PF02779 Transketolase, pyrimidine binding domain KFF03_RS15740 PF02780 Transketolase, C-terminal domain KFF03_RS15740 PF00456 Transketolase, thiamine diphosphate binding domain KFF03_RS15750 PF01979 Amidohydrolase family KFF03_RS15765 PF00196 Bacterial regulatory proteins, luxR family KFF03_RS15765 PF17874 MalT-like TPR region KFF03_RS15775 PF00497 Bacterial extracellular solute-binding proteins, family 3 KFF03_RS15780 PF09335 SNARE associated Golgi protein KFF03_RS15790 PF07055 Enoyl reductase FAD binding domain KFF03_RS15790 PF12241 Trans-2-enoyl-CoA reductase catalytic region KFF03_RS15790 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KFF03_RS15795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS15795 PF00672 HAMP domain KFF03_RS15795 PF17200 Single Cache domain 2 KFF03_RS15800 PF14864 Alkyl sulfatase C-terminal KFF03_RS15800 PF14863 Alkyl sulfatase dimerisation KFF03_RS15800 PF00753 Metallo-beta-lactamase superfamily KFF03_RS15805 PF12833 Helix-turn-helix domain KFF03_RS15805 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KFF03_RS15820 PF00375 Sodium:dicarboxylate symporter family KFF03_RS15835 PF00216 Bacterial DNA-binding protein KFF03_RS15840 PF07992 Pyridine nucleotide-disulphide oxidoreductase KFF03_RS15840 PF18113 Rubredoxin binding C-terminal domain KFF03_RS15845 PF00301 Rubredoxin KFF03_RS15850 PF04345 Chorismate lyase KFF03_RS15855 PF01040 UbiA prenyltransferase family KFF03_RS15860 PF00072 Response regulator receiver domain KFF03_RS15860 PF00486 Transcriptional regulatory protein, C terminal KFF03_RS15865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS15865 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS15865 PF00989 PAS fold KFF03_RS15865 PF11808 Phosphate regulon sensor protein PhoR KFF03_RS15870 PF00072 Response regulator receiver domain KFF03_RS15880 PF12105 SpoU, rRNA methylase, C-terminal KFF03_RS15880 PF00588 SpoU rRNA Methylase family KFF03_RS15895 PF00437 Type II/IV secretion system protein KFF03_RS15895 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KFF03_RS15905 PF00486 Transcriptional regulatory protein, C terminal KFF03_RS15905 PF00072 Response regulator receiver domain KFF03_RS15910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS15910 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS15910 PF00989 PAS fold KFF03_RS15910 PF11808 Phosphate regulon sensor protein PhoR KFF03_RS15925 PF00009 Elongation factor Tu GTP binding domain KFF03_RS15925 PF03144 Elongation factor Tu domain 2 KFF03_RS15925 PF03764 Elongation factor G, domain IV KFF03_RS15925 PF00679 Elongation factor G C-terminus KFF03_RS15925 PF14492 Elongation Factor G, domain II KFF03_RS15930 PF00009 Elongation factor Tu GTP binding domain KFF03_RS15930 PF03144 Elongation factor Tu domain 2 KFF03_RS15930 PF03143 Elongation factor Tu C-terminal domain KFF03_RS15935 PF01197 Ribosomal protein L31 KFF03_RS15940 PF00270 DEAD/DEAH box helicase KFF03_RS15940 PF00271 Helicase conserved C-terminal domain KFF03_RS15940 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KFF03_RS15940 PF18074 Primosomal protein N C-terminal domain KFF03_RS15940 PF17764 3′ DNA-binding domain (3′BD) KFF03_RS15950 PF04608 Phosphatidylglycerophosphatase A KFF03_RS15965 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KFF03_RS15970 PF03061 Thioesterase superfamily KFF03_RS15975 PF13230 Glutamine amidotransferases class-II KFF03_RS15980 PF12706 Beta-lactamase superfamily domain KFF03_RS15990 PF01022 Bacterial regulatory protein, arsR family KFF03_RS15995 PF02773 S-adenosylmethionine synthetase, C-terminal domain KFF03_RS15995 PF02772 S-adenosylmethionine synthetase, central domain KFF03_RS15995 PF00438 S-adenosylmethionine synthetase, N-terminal domain KFF03_RS16000 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KFF03_RS16000 PF05221 S-adenosyl-L-homocysteine hydrolase KFF03_RS16005 PF02219 Methylenetetrahydrofolate reductase KFF03_RS16010 PF10707 PhoP regulatory network protein YrbL KFF03_RS16025 PF04932 O-Antigen ligase KFF03_RS16030 PF05159 Capsule polysaccharide biosynthesis protein KFF03_RS16045 PF01339 CheB methylesterase KFF03_RS16045 PF00072 Response regulator receiver domain KFF03_RS16050 PF01584 CheW-like domain KFF03_RS16050 PF02895 Signal transducing histidine kinase, homodimeric domain KFF03_RS16050 PF00072 Response regulator receiver domain KFF03_RS16050 PF00072 Response regulator receiver domain KFF03_RS16050 PF01584 CheW-like domain KFF03_RS16050 PF02895 Signal transducing histidine kinase, homodimeric domain KFF03_RS16050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS16050 PF01627 Hpt domain KFF03_RS16050 PF01627 Hpt domain KFF03_RS16050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS16055 PF01739 CheR methyltransferase, SAM binding domain KFF03_RS16060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KFF03_RS16060 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KFF03_RS16065 PF01584 CheW-like domain KFF03_RS16070 PF00072 Response regulator receiver domain KFF03_RS16075 PF00072 Response regulator receiver domain KFF03_RS16080 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KFF03_RS16080 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KFF03_RS16090 PF02622 Uncharacterized ACR, COG1678 KFF03_RS16095 PF03652 Holliday junction resolvase KFF03_RS16100 PF00156 Phosphoribosyl transferase domain KFF03_RS16105 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KFF03_RS16105 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KFF03_RS16110 PF01979 Amidohydrolase family KFF03_RS16125 PF00127 Copper binding proteins, plastocyanin/azurin family KFF03_RS16130 PF16653 Saccharopine dehydrogenase C-terminal domain KFF03_RS16130 PF03435 Saccharopine dehydrogenase NADP binding domain KFF03_RS16135 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KFF03_RS16140 PF01261 Xylose isomerase-like TIM barrel KFF03_RS16150 PF00501 AMP-binding enzyme KFF03_RS16150 PF13193 AMP-binding enzyme C-terminal domain KFF03_RS16155 PF06276 Ferric iron reductase FhuF-like transporter KFF03_RS16155 PF04183 IucA / IucC family KFF03_RS16160 PF04183 IucA / IucC family KFF03_RS16160 PF06276 Ferric iron reductase FhuF-like transporter KFF03_RS16170 PF01648 4'-phosphopantetheinyl transferase superfamily KFF03_RS16175 PF16653 Saccharopine dehydrogenase C-terminal domain KFF03_RS16175 PF03435 Saccharopine dehydrogenase NADP binding domain KFF03_RS16180 PF17810 Arginine decarboxylase helical bundle domain KFF03_RS16180 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KFF03_RS16180 PF17944 Arginine decarboxylase C-terminal helical extension KFF03_RS16190 PF04371 Porphyromonas-type peptidyl-arginine deiminase KFF03_RS16195 PF00795 Carbon-nitrogen hydrolase KFF03_RS16200 PF08021 Siderophore-interacting FAD-binding domain KFF03_RS16200 PF04954 Siderophore-interacting protein KFF03_RS16205 PF01295 Adenylate cyclase, class-I KFF03_RS16205 PF12633 Adenylate cyclase NT domain KFF03_RS16215 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KFF03_RS16215 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KFF03_RS16220 PF01678 Diaminopimelate epimerase KFF03_RS16230 PF13419 Haloacid dehalogenase-like hydrolase KFF03_RS16250 PF17810 Arginine decarboxylase helical bundle domain KFF03_RS16250 PF17944 Arginine decarboxylase C-terminal helical extension KFF03_RS16250 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KFF03_RS16255 PF17284 Spermidine synthase tetramerisation domain KFF03_RS16280 PF02770 Acyl-CoA dehydrogenase, middle domain KFF03_RS16280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF03_RS16280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF03_RS16280 PF12806 Acetyl-CoA dehydrogenase C-terminal like KFF03_RS16310 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal KFF03_RS16310 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal KFF03_RS16320 PF00440 Bacterial regulatory proteins, tetR family KFF03_RS16320 PF02909 Tetracyclin repressor-like, C-terminal domain KFF03_RS16330 PF00732 GMC oxidoreductase KFF03_RS16330 PF05199 GMC oxidoreductase KFF03_RS16340 PF12833 Helix-turn-helix domain KFF03_RS16340 PF14525 AraC-binding-like domain KFF03_RS16345 PF00753 Metallo-beta-lactamase superfamily KFF03_RS16345 PF14863 Alkyl sulfatase dimerisation KFF03_RS16345 PF14864 Alkyl sulfatase C-terminal KFF03_RS16355 PF08719 Domain of unknown function (DUF1768) KFF03_RS16355 PF00925 GTP cyclohydrolase II KFF03_RS16370 PF02637 GatB domain KFF03_RS16370 PF02934 GatB/GatE catalytic domain KFF03_RS16375 PF01425 Amidase KFF03_RS16380 PF02686 Glu-tRNAGln amidotransferase C subunit KFF03_RS16395 PF04085 rod shape-determining protein MreC KFF03_RS16405 PF02545 Maf-like protein KFF03_RS16410 PF00575 S1 RNA binding domain KFF03_RS16410 PF10150 Ribonuclease E/G family KFF03_RS16420 PF00795 Carbon-nitrogen hydrolase KFF03_RS16425 PF00924 Mechanosensitive ion channel KFF03_RS16425 PF05552 Conserved TM helix KFF03_RS16430 PF00501 AMP-binding enzyme KFF03_RS16430 PF13193 AMP-binding enzyme C-terminal domain KFF03_RS16455 PF00625 Guanylate kinase KFF03_RS16460 PF01192 RNA polymerase Rpb6 KFF03_RS16465 PF13291 ACT domain KFF03_RS16465 PF04607 Region found in RelA / SpoT proteins KFF03_RS16465 PF02824 TGS domain KFF03_RS16470 PF01042 Endoribonuclease L-PSP KFF03_RS16495 PF00440 Bacterial regulatory proteins, tetR family KFF03_RS16495 PF17932 Tetracyclin repressor-like, C-terminal domain KFF03_RS16505 PF01039 Carboxyl transferase domain KFF03_RS16510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF03_RS16510 PF02770 Acyl-CoA dehydrogenase, middle domain KFF03_RS16510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF03_RS16520 PF00289 Biotin carboxylase, N-terminal domain KFF03_RS16520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KFF03_RS16520 PF00364 Biotin-requiring enzyme KFF03_RS16520 PF18140 Propionyl-coenzyme A carboxylase BT domain KFF03_RS16520 PF02785 Biotin carboxylase C-terminal domain KFF03_RS16530 PF00378 Enoyl-CoA hydratase/isomerase KFF03_RS16550 PF10415 Fumarase C C-terminus KFF03_RS16550 PF00206 Lyase KFF03_RS16555 PF13533 Biotin-lipoyl like KFF03_RS16560 PF00005 ABC transporter KFF03_RS16575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS16575 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS16575 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KFF03_RS16575 PF01627 Hpt domain KFF03_RS16575 PF00672 HAMP domain KFF03_RS16575 PF00072 Response regulator receiver domain KFF03_RS16580 PF00072 Response regulator receiver domain KFF03_RS16595 PF07497 Rho termination factor, RNA-binding domain KFF03_RS16595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KFF03_RS16595 PF07498 Rho termination factor, N-terminal domain KFF03_RS16600 PF00085 Thioredoxin KFF03_RS16605 PF02541 Ppx/GppA phosphatase family KFF03_RS16610 PF01774 UreD urease accessory protein KFF03_RS16615 PF00547 Urease, gamma subunit KFF03_RS16620 PF00699 Urease beta subunit KFF03_RS16625 PF01979 Amidohydrolase family KFF03_RS16625 PF00449 Urease alpha-subunit, N-terminal domain KFF03_RS16630 PF05194 UreE urease accessory protein, C-terminal domain KFF03_RS16630 PF02814 UreE urease accessory protein, N-terminal domain KFF03_RS16635 PF01730 UreF KFF03_RS16640 PF02492 CobW/HypB/UreG, nucleotide-binding domain KFF03_RS16650 PF13188 PAS domain KFF03_RS16650 PF00158 Sigma-54 interaction domain KFF03_RS16650 PF02954 Bacterial regulatory protein, Fis family KFF03_RS16655 PF02653 Branched-chain amino acid transport system / permease component KFF03_RS16665 PF12399 Branched-chain amino acid ATP-binding cassette transporter KFF03_RS16665 PF00005 ABC transporter KFF03_RS16670 PF00005 ABC transporter KFF03_RS16675 PF04380 Membrane fusogenic activity KFF03_RS16685 PF00543 Nitrogen regulatory protein P-II KFF03_RS16690 PF00909 Ammonium Transporter Family KFF03_RS16695 PF00691 OmpA family KFF03_RS16705 PF00691 OmpA family KFF03_RS16705 PF13488 Glycine zipper KFF03_RS16710 PF01053 Cys/Met metabolism PLP-dependent enzyme KFF03_RS16715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS16715 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS16715 PF09308 LuxQ, periplasmic KFF03_RS16715 PF00072 Response regulator receiver domain KFF03_RS16725 PF09456 RcsC Alpha-Beta-Loop (ABL) KFF03_RS16725 PF00072 Response regulator receiver domain KFF03_RS16725 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS16725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS16730 PF00072 Response regulator receiver domain KFF03_RS16730 PF00196 Bacterial regulatory proteins, luxR family KFF03_RS16735 PF18073 Rubredoxin metal binding domain KFF03_RS16740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KFF03_RS16740 PF00529 HlyD membrane-fusion protein of T1SS KFF03_RS16745 PF00873 AcrB/AcrD/AcrF family KFF03_RS16750 PF11999 Protein of unknown function (DUF3494) KFF03_RS16750 PF02368 Bacterial Ig-like domain (group 2) KFF03_RS16760 PF01063 Amino-transferase class IV KFF03_RS16765 PF01590 GAF domain KFF03_RS16765 PF00563 EAL domain KFF03_RS16765 PF00360 Phytochrome region KFF03_RS16765 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS16775 PF03061 Thioesterase superfamily KFF03_RS16780 PF00490 Delta-aminolevulinic acid dehydratase KFF03_RS16785 PF02503 Polyphosphate kinase middle domain KFF03_RS16785 PF17941 Polyphosphate kinase C-terminal domain 1 KFF03_RS16785 PF13089 Polyphosphate kinase N-terminal domain KFF03_RS16785 PF13090 Polyphosphate kinase C-terminal domain 2 KFF03_RS16800 PF03480 Bacterial extracellular solute-binding protein, family 7 KFF03_RS16805 PF00580 UvrD/REP helicase N-terminal domain KFF03_RS16805 PF13361 UvrD-like helicase C-terminal domain KFF03_RS16810 PF01418 Helix-turn-helix domain, rpiR family KFF03_RS16810 PF01380 SIS domain KFF03_RS16825 PF01554 MatE KFF03_RS16835 PF02803 Thiolase, C-terminal domain KFF03_RS16835 PF00108 Thiolase, N-terminal domain KFF03_RS16845 PF00501 AMP-binding enzyme KFF03_RS16845 PF13193 AMP-binding enzyme C-terminal domain KFF03_RS16855 PF12823 Domain of unknown function (DUF3817) KFF03_RS16865 PF03734 L,D-transpeptidase catalytic domain KFF03_RS16865 PF01471 Putative peptidoglycan binding domain KFF03_RS16870 PF05951 Bacterial protein of unknown function (DUF882) KFF03_RS16875 PF05524 PEP-utilising enzyme, N-terminal KFF03_RS16875 PF00391 PEP-utilising enzyme, mobile domain KFF03_RS16875 PF02896 PEP-utilising enzyme, TIM barrel domain KFF03_RS16875 PF01590 GAF domain KFF03_RS16880 PF00293 NUDIX domain KFF03_RS16900 PF10672 S-adenosylmethionine-dependent methyltransferase KFF03_RS16900 PF17785 PUA-like domain KFF03_RS16910 PF01494 FAD binding domain KFF03_RS16915 PF01494 FAD binding domain KFF03_RS16920 PF00557 Metallopeptidase family M24 KFF03_RS16920 PF05195 Aminopeptidase P, N-terminal domain KFF03_RS16935 PF05164 Cell division protein ZapA KFF03_RS16945 PF01812 5-formyltetrahydrofolate cyclo-ligase family KFF03_RS16965 PF00186 Dihydrofolate reductase KFF03_RS16970 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS16970 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS16970 PF00563 EAL domain KFF03_RS16980 PF03190 Protein of unknown function, DUF255 KFF03_RS17010 PF00303 Thymidylate synthase KFF03_RS17015 PF01790 Prolipoprotein diacylglyceryl transferase KFF03_RS17020 PF01925 Sulfite exporter TauE/SafE KFF03_RS17030 PF01734 Patatin-like phospholipase KFF03_RS17035 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KFF03_RS17035 PF01612 3'-5' exonuclease KFF03_RS17035 PF00476 DNA polymerase family A KFF03_RS17035 PF01367 5'-3' exonuclease, C-terminal SAM fold KFF03_RS17045 PF01636 Phosphotransferase enzyme family KFF03_RS17050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KFF03_RS17055 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain KFF03_RS17055 PF01464 Transglycosylase SLT domain KFF03_RS17060 PF00994 Probable molybdopterin binding domain KFF03_RS17060 PF02464 Competence-damaged protein KFF03_RS17065 PF13617 YnbE-like lipoprotein KFF03_RS17075 PF04011 LemA family KFF03_RS17080 PF01435 Peptidase family M48 KFF03_RS17085 PF00005 ABC transporter KFF03_RS17085 PF00664 ABC transporter transmembrane region KFF03_RS17090 PF04055 Radical SAM superfamily KFF03_RS17090 PF06463 Molybdenum Cofactor Synthesis C KFF03_RS17095 PF12804 MobA-like NTP transferase domain KFF03_RS17100 PF00994 Probable molybdopterin binding domain KFF03_RS17105 PF01967 MoaC family KFF03_RS17110 PF02597 ThiS family KFF03_RS17115 PF02391 MoaE protein KFF03_RS17120 PF00378 Enoyl-CoA hydratase/isomerase KFF03_RS17125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KFF03_RS17125 PF02770 Acyl-CoA dehydrogenase, middle domain KFF03_RS17125 PF12806 Acetyl-CoA dehydrogenase C-terminal like KFF03_RS17125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KFF03_RS17130 PF01926 50S ribosome-binding GTPase KFF03_RS17135 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KFF03_RS17140 PF00034 Cytochrome c KFF03_RS17145 PF01323 DSBA-like thioredoxin domain KFF03_RS17155 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS17160 PF00455 DeoR C terminal sensor domain KFF03_RS17160 PF08220 DeoR-like helix-turn-helix domain KFF03_RS17165 PF01380 SIS domain KFF03_RS17175 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KFF03_RS17175 PF03900 Porphobilinogen deaminase, C-terminal domain KFF03_RS17180 PF02602 Uroporphyrinogen-III synthase HemD KFF03_RS17185 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase KFF03_RS17195 PF13458 Periplasmic binding protein KFF03_RS17200 PF00970 Oxidoreductase FAD-binding domain KFF03_RS17200 PF00111 2Fe-2S iron-sulfur cluster binding domain KFF03_RS17200 PF00175 Oxidoreductase NAD-binding domain KFF03_RS17205 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase KFF03_RS17210 PF04241 Protein of unknown function (DUF423) KFF03_RS17215 PF02390 Putative methyltransferase KFF03_RS17245 PF00593 TonB dependent receptor KFF03_RS17245 PF07715 TonB-dependent Receptor Plug Domain KFF03_RS17250 PF04773 FecR protein KFF03_RS17250 PF16220 Domain of unknown function (DUF4880) KFF03_RS17255 PF04542 Sigma-70 region 2 KFF03_RS17255 PF08281 Sigma-70, region 4 KFF03_RS17265 PF01618 MotA/TolQ/ExbB proton channel family KFF03_RS17270 PF02472 Biopolymer transport protein ExbD/TolR KFF03_RS17285 PF00005 ABC transporter KFF03_RS17285 PF12848 ABC transporter KFF03_RS17315 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ KFF03_RS17320 PF02600 Disulfide bond formation protein DsbB KFF03_RS17330 PF04262 Glutamate-cysteine ligase KFF03_RS17335 PF17674 HHH domain KFF03_RS17335 PF00575 S1 RNA binding domain KFF03_RS17335 PF09371 Tex-like protein N-terminal domain KFF03_RS17335 PF16921 Tex protein YqgF-like domain KFF03_RS17345 PF01293 Phosphoenolpyruvate carboxykinase KFF03_RS17350 PF01430 Hsp33 protein KFF03_RS17360 PF00196 Bacterial regulatory proteins, luxR family KFF03_RS17360 PF00072 Response regulator receiver domain KFF03_RS17365 PF01479 S4 domain KFF03_RS17370 PF00072 Response regulator receiver domain KFF03_RS17370 PF01627 Hpt domain KFF03_RS17370 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS17370 PF00672 HAMP domain KFF03_RS17370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS17375 PF13419 Haloacid dehalogenase-like hydrolase KFF03_RS17380 PF00293 NUDIX domain KFF03_RS17385 PF00072 Response regulator receiver domain KFF03_RS17385 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS17385 PF09308 LuxQ, periplasmic KFF03_RS17385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS17395 PF03788 LrgA family KFF03_RS17405 PF01594 AI-2E family transporter KFF03_RS17410 PF00072 Response regulator receiver domain KFF03_RS17410 PF00486 Transcriptional regulatory protein, C terminal KFF03_RS17415 PF00672 HAMP domain KFF03_RS17415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS17415 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS17415 PF16527 Two-component sensor protein CpxA, periplasmic domain KFF03_RS17420 PF00390 Malic enzyme, N-terminal domain KFF03_RS17420 PF03949 Malic enzyme, NAD binding domain KFF03_RS17430 PF00679 Elongation factor G C-terminus KFF03_RS17430 PF00009 Elongation factor Tu GTP binding domain KFF03_RS17430 PF03144 Elongation factor Tu domain 2 KFF03_RS17435 PF00120 Glutamine synthetase, catalytic domain KFF03_RS17435 PF03951 Glutamine synthetase, beta-Grasp domain KFF03_RS17440 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KFF03_RS17440 PF01488 Shikimate / quinate 5-dehydrogenase KFF03_RS17440 PF08501 Shikimate dehydrogenase substrate binding domain KFF03_RS17445 PF01218 Coproporphyrinogen III oxidase KFF03_RS17450 PF01300 Telomere recombination KFF03_RS17455 PF17782 DprA winged helix domain KFF03_RS17455 PF02481 DNA recombination-mediator protein A KFF03_RS17465 PF01327 Polypeptide deformylase KFF03_RS17470 PF02911 Formyl transferase, C-terminal domain KFF03_RS17470 PF00551 Formyl transferase KFF03_RS17475 PF01189 16S rRNA methyltransferase RsmB/F KFF03_RS17475 PF01029 NusB family KFF03_RS17480 PF02254 TrkA-N domain KFF03_RS17480 PF02080 TrkA-C domain KFF03_RS17485 PF02386 Cation transport protein KFF03_RS17490 PF03279 Bacterial lipid A biosynthesis acyltransferase KFF03_RS17495 PF00072 Response regulator receiver domain KFF03_RS17500 PF00672 HAMP domain KFF03_RS17500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KFF03_RS17500 PF00512 His Kinase A (phospho-acceptor) domain KFF03_RS17505 PF02091 Glycyl-tRNA synthetase alpha subunit KFF03_RS17510 PF05746 DALR anticodon binding domain KFF03_RS17510 PF02092 Glycyl-tRNA synthetase beta subunit KFF03_RS17525 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KFF03_RS17525 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KFF03_RS17530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KFF03_RS17530 PF02874 ATP synthase alpha/beta family, beta-barrel domain KFF03_RS17535 PF00231 ATP synthase KFF03_RS17540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KFF03_RS17540 PF02874 ATP synthase alpha/beta family, beta-barrel domain KFF03_RS17540 PF00306 ATP synthase alpha/beta chain, C terminal domain KFF03_RS17545 PF00213 ATP synthase delta (OSCP) subunit KFF03_RS17550 PF00430 ATP synthase B/B' CF(0) KFF03_RS17555 PF00137 ATP synthase subunit C KFF03_RS17560 PF00119 ATP synthase A chain KFF03_RS17570 PF02195 ParB-like nuclease domain KFF03_RS17570 PF17762 HTH domain found in ParB protein KFF03_RS17575 PF13614 AAA domain KFF03_RS17580 PF02527 rRNA small subunit methyltransferase G KFF03_RS17585 PF00375 Sodium:dicarboxylate symporter family KFF03_RS17600 PF00563 EAL domain KFF03_RS17600 PF13188 PAS domain KFF03_RS17600 PF03707 Bacterial signalling protein N terminal repeat KFF03_RS17600 PF00990 Diguanylate cyclase, GGDEF domain KFF03_RS17605 PF01134 Glucose inhibited division protein A KFF03_RS17605 PF13932 GidA associated domain KFF03_RS17630 PF01926 50S ribosome-binding GTPase KFF03_RS17630 PF12631 MnmE helical domain KFF03_RS17630 PF10396 GTP-binding protein TrmE N-terminus KFF03_RS17635 PF02096 60Kd inner membrane protein KFF03_RS17635 PF14849 YidC periplasmic domain KFF03_RS17640 PF01809 Putative membrane protein insertion efficiency factor KFF03_RS17645 PF00825 Ribonuclease P KFF03_RS17650 PF00468 Ribosomal protein L34