locus-tag	class	description
ABI39_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ABI39_RS00010	COG0778	Nitroreductase
ABI39_RS00025	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ABI39_RS00040	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ABI39_RS00045	COG0318	PFAM AMP-dependent synthetase and ligase
ABI39_RS00060	COG0359	binds to the 23S rRNA
ABI39_RS00065	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ABI39_RS00070	COG0360	Binds together with S18 to 16S ribosomal RNA
ABI39_RS00095	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ABI39_RS00100	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABI39_RS00150	COG3661	Belongs to the glycosyl hydrolase 67 family
ABI39_RS00160	COG3507	Belongs to the glycosyl hydrolase 43 family
ABI39_RS00165	COG3292	Two component regulator propeller
ABI39_RS00165	COG2205	protein histidine kinase activity
ABI39_RS00165	COG0745	RESPONSE REGULATOR receiver
ABI39_RS00175	COG4771	TonB-dependent receptor
ABI39_RS00195	COG2211	Major facilitator Superfamily
ABI39_RS00205	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABI39_RS00215	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
ABI39_RS00220	COG0658	competence protein
ABI39_RS00220	COG2333	competence protein COMEC
ABI39_RS00225	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ABI39_RS00245	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ABI39_RS00255	COG0009	L-threonylcarbamoyladenylate synthase
ABI39_RS00260	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ABI39_RS00295	COG0681	Belongs to the peptidase S26 family
ABI39_RS00365	COG2205	protein histidine kinase activity
ABI39_RS00365	COG0745	RESPONSE REGULATOR receiver
ABI39_RS00365	COG3292	Two component regulator propeller
ABI39_RS00385	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
ABI39_RS00400	COG1280	lysine exporter protein (LysE YggA)
ABI39_RS00410	COG0745	RESPONSE REGULATOR receiver
ABI39_RS00410	COG2205	protein histidine kinase activity
ABI39_RS00410	COG3292	Two component regulator propeller
ABI39_RS00415	COG2059	Chromate
ABI39_RS00430	COG1501	Belongs to the glycosyl hydrolase 31 family
ABI39_RS00435	COG1649	PFAM Uncharacterised BCR, COG1649
ABI39_RS00450	COG3525	Glycosyl hydrolase, family 20, catalytic domain
ABI39_RS00465	COG1966	Carbon starvation protein
ABI39_RS00475	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
ABI39_RS00485	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ABI39_RS00490	COG0284	orotidine-5'-phosphate decarboxylase activity
ABI39_RS00495	COG1078	dGTPase activity
ABI39_RS00500	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABI39_RS00505	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
ABI39_RS00505	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ABI39_RS00510	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABI39_RS00520	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ABI39_RS00540	COG0386	Belongs to the glutathione peroxidase family
ABI39_RS00550	COG4206	TonB-dependent receptor
ABI39_RS00550	COG1629	transport
ABI39_RS00560	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
ABI39_RS00570	COG4948	Mandelate Racemase Muconate Lactonizing
ABI39_RS00595	COG2267	carboxylic ester hydrolase activity
ABI39_RS00605	COG3940	Belongs to the glycosyl hydrolase 43 family
ABI39_RS00645	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
ABI39_RS00655	COG1629	transport
ABI39_RS00655	COG4206	TonB-dependent receptor
ABI39_RS00660	COG1595	DNA-templated transcription, initiation
ABI39_RS00675	COG3250	beta-galactosidase activity
ABI39_RS00690	COG1472	Belongs to the glycosyl hydrolase 3 family
ABI39_RS00700	COG4948	Mandelate Racemase Muconate Lactonizing
ABI39_RS00710	COG0702	epimerase
ABI39_RS00715	COG1629	transport
ABI39_RS00725	COG1082	Xylose isomerase domain protein TIM barrel
ABI39_RS00735	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
ABI39_RS00740	COG3292	Two component regulator propeller
ABI39_RS00740	COG2205	protein histidine kinase activity
ABI39_RS00740	COG0745	RESPONSE REGULATOR receiver
ABI39_RS00765	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABI39_RS00765	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABI39_RS00770	COG0436	Aminotransferase
ABI39_RS00780	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ABI39_RS00790	COG0335	large ribosomal subunit rRNA binding
ABI39_RS00800	COG3292	Two component regulator propeller
ABI39_RS00800	COG2205	protein histidine kinase activity
ABI39_RS00800	COG0745	RESPONSE REGULATOR receiver
ABI39_RS00805	COG3254	rhamnose metabolic process
ABI39_RS00810	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
ABI39_RS00815	COG3401	FG-GAP repeat protein
ABI39_RS00845	COG0702	epimerase
ABI39_RS00850	COG4771	TonB-dependent receptor
ABI39_RS00870	COG2755	lipolytic protein G-D-S-L family
ABI39_RS00875	COG3401	FG-GAP repeat protein
ABI39_RS00880	COG3250	beta-galactosidase activity
ABI39_RS00890	COG3119	arylsulfatase activity
ABI39_RS00905	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABI39_RS00910	COG1629	transport
ABI39_RS00910	COG4206	TonB-dependent receptor
ABI39_RS00925	COG4771	TonB-dependent receptor
ABI39_RS00935	COG4771	TonB-dependent receptor
ABI39_RS00950	COG4771	TonB-dependent receptor
ABI39_RS01000	COG3250	beta-galactosidase activity
ABI39_RS01005	COG2755	lipolytic protein G-D-S-L family
ABI39_RS01040	COG3254	rhamnose metabolic process
ABI39_RS01050	COG1136	(ABC) transporter
ABI39_RS01055	COG1136	(ABC) transporter
ABI39_RS01055	COG0577	efflux transmembrane transporter activity
ABI39_RS01060	COG1136	(ABC) transporter
ABI39_RS01060	COG0577	efflux transmembrane transporter activity
ABI39_RS01080	COG2996	Protein conserved in bacteria
ABI39_RS01085	COG1979	alcohol dehydrogenase
ABI39_RS01095	COG1136	(ABC) transporter
ABI39_RS01100	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ABI39_RS01105	COG0589	response to stress
ABI39_RS01105	COG0475	glutathione-regulated potassium exporter activity
ABI39_RS01110	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ABI39_RS01120	COG0423	glycine-tRNA ligase activity
ABI39_RS01150	COG0702	epimerase
ABI39_RS01155	COG1629	transport
ABI39_RS01165	COG2207	Transcriptional regulator
ABI39_RS01180	COG0738	Major facilitator superfamily
ABI39_RS01185	COG1063	alcohol dehydrogenase
ABI39_RS01190	COG2095	MarC family integral membrane protein
ABI39_RS01235	COG1696	Membrane protein involved in D-alanine export
ABI39_RS01260	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABI39_RS01290	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABI39_RS01300	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABI39_RS01340	COG3969	phosphoadenosine phosphosulfate
ABI39_RS01345	COG1475	DNA binding
ABI39_RS01355	COG0039	L-malate dehydrogenase activity
ABI39_RS01370	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABI39_RS01400	COG0489	protein tyrosine kinase activity
ABI39_RS01415	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ABI39_RS01420	COG1722	exodeoxyribonuclease VII activity
ABI39_RS01425	COG1570	exodeoxyribonuclease VII activity
ABI39_RS01435	COG0534	Mate efflux family protein
ABI39_RS01510	COG0641	radical SAM
ABI39_RS01585	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
ABI39_RS01595	COG1088	dTDP-glucose 4,6-dehydratase activity
ABI39_RS01600	COG1629	transport
ABI39_RS01615	COG3408	Glycogen debranching enzyme
ABI39_RS01615	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
ABI39_RS01620	COG0702	epimerase
ABI39_RS01625	COG4771	TonB-dependent receptor
ABI39_RS01640	COG0488	(ABC) transporter
ABI39_RS01645	COG0569	domain protein
ABI39_RS01645	COG2985	domain, Protein
ABI39_RS01650	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ABI39_RS01655	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ABI39_RS01655	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ABI39_RS01675	COG4206	TonB-dependent receptor
ABI39_RS01675	COG1629	transport
ABI39_RS01680	COG2205	protein histidine kinase activity
ABI39_RS01685	COG0668	transmembrane transport
ABI39_RS01725	COG2086	electron transfer activity
ABI39_RS01730	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
ABI39_RS01750	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
ABI39_RS01760	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
ABI39_RS01795	COG4804	nuclease activity
ABI39_RS01810	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
ABI39_RS01820	COG1228	amidohydrolase
ABI39_RS01825	COG3404	Formiminotransferase-cyclodeaminase
ABI39_RS01830	COG2986	histidine ammonia-lyase
ABI39_RS01835	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
ABI39_RS01845	COG0693	protein deglycase activity
ABI39_RS01865	COG0673	inositol 2-dehydrogenase activity
ABI39_RS01870	COG0288	reversible hydration of carbon dioxide
ABI39_RS01890	COG0459	protein refolding
ABI39_RS01895	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
ABI39_RS01905	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
ABI39_RS01915	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
ABI39_RS01920	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
ABI39_RS01925	COG1518	maintenance of DNA repeat elements
ABI39_RS01955	COG1203	CRISPR-associated helicase, Cas3
ABI39_RS01960	COG0124	histidyl-tRNA synthetase
ABI39_RS01965	COG1879	ABC-type sugar transport system periplasmic component
ABI39_RS01980	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ABI39_RS01985	COG3958	Transketolase
ABI39_RS01990	COG3959	Transketolase, thiamine diphosphate binding domain
ABI39_RS01995	COG1349	DNA-binding transcription factor activity
ABI39_RS02000	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABI39_RS02000	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABI39_RS02010	COG0745	RESPONSE REGULATOR receiver
ABI39_RS02010	COG2205	protein histidine kinase activity
ABI39_RS02010	COG3292	Two component regulator propeller
ABI39_RS02010	COG3292	Two component regulator propeller
ABI39_RS02010	COG2205	protein histidine kinase activity
ABI39_RS02010	COG0745	RESPONSE REGULATOR receiver
ABI39_RS02020	COG1629	transport
ABI39_RS02100	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ABI39_RS02110	COG0534	Mate efflux family protein
ABI39_RS02115	COG0784	Response regulator, receiver
ABI39_RS02115	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABI39_RS02115	COG2205	protein histidine kinase activity
ABI39_RS02115	COG2198	Histidine kinase
ABI39_RS02120	COG2204	response regulator
ABI39_RS02130	COG0564	pseudouridine synthase activity
ABI39_RS02135	COG1028	Short-chain dehydrogenase reductase Sdr
ABI39_RS02150	COG3250	beta-galactosidase activity
ABI39_RS02165	COG1629	transport
ABI39_RS02165	COG4206	TonB-dependent receptor
ABI39_RS02170	COG0513	Belongs to the DEAD box helicase family
ABI39_RS02190	COG0482	sulfurtransferase activity
ABI39_RS02195	COG2197	response regulator
ABI39_RS02225	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ABI39_RS02240	COG3022	response to hydroperoxide
ABI39_RS02245	COG2885	chlorophyll binding
ABI39_RS02255	COG2895	sulfate adenylyltransferase (ATP) activity
ABI39_RS02260	COG0175	sulfate reduction
ABI39_RS02265	COG0529	Catalyzes the synthesis of activated sulfate
ABI39_RS02270	COG3273	potassium ion transport
ABI39_RS02270	COG0471	metal ion transport
ABI39_RS02275	COG1218	3'(2'),5'-bisphosphate nucleotidase
ABI39_RS02285	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ABI39_RS02315	COG0517	IMP dehydrogenase activity
ABI39_RS02315	COG0516	GMP reductase activity
ABI39_RS02325	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
ABI39_RS02330	COG0740	serine-type endopeptidase activity
ABI39_RS02335	COG0544	peptidyl-prolyl cis-trans isomerase activity
ABI39_RS02340	COG0724	RNA recognition motif
ABI39_RS02350	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ABI39_RS02355	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABI39_RS02360	COG1160	GTP binding
ABI39_RS02365	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ABI39_RS02370	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ABI39_RS02425	COG0039	L-malate dehydrogenase activity
ABI39_RS02430	COG0358	DNA primase activity
ABI39_RS02435	COG0302	gtp cyclohydrolase
ABI39_RS02445	COG0149	triose-phosphate isomerase activity
ABI39_RS02460	COG0739	heme binding
ABI39_RS02465	COG0105	UTP biosynthetic process
ABI39_RS02470	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ABI39_RS02475	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
ABI39_RS02490	COG0848	biopolymer transport protein
ABI39_RS02500	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ABI39_RS02505	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ABI39_RS02545	COG0420	3'-5' exonuclease activity
ABI39_RS02555	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABI39_RS02560	COG4206	TonB-dependent receptor
ABI39_RS02560	COG1629	transport
ABI39_RS02565	COG4977	sequence-specific DNA binding
ABI39_RS02585	COG3408	Glycogen debranching enzyme
ABI39_RS02590	COG0702	epimerase
ABI39_RS02610	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABI39_RS02620	COG4771	TonB-dependent receptor
ABI39_RS02625	COG0702	epimerase
ABI39_RS02640	COG3507	Belongs to the glycosyl hydrolase 43 family
ABI39_RS02650	COG4771	TonB-dependent receptor
ABI39_RS02660	COG4206	TonB-dependent receptor
ABI39_RS02660	COG1629	transport
ABI39_RS02675	COG3292	Two component regulator propeller
ABI39_RS02675	COG0745	RESPONSE REGULATOR receiver
ABI39_RS02675	COG2205	protein histidine kinase activity
ABI39_RS02695	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ABI39_RS02700	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ABI39_RS02705	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
ABI39_RS02720	COG1346	cytolysis
ABI39_RS02730	COG0280	phosphate acetyltransferase
ABI39_RS02735	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ABI39_RS02740	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABI39_RS02745	COG2151	metal-sulfur cluster biosynthetic enzyme
ABI39_RS02750	COG2003	Belongs to the UPF0758 family
ABI39_RS02755	COG1216	Glycosyl transferase, family 2
ABI39_RS02755	COG0463	Glycosyl transferase, family 2
ABI39_RS02760	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ABI39_RS02765	COG0230	Belongs to the bacterial ribosomal protein bL34 family
ABI39_RS02770	COG0641	radical SAM
ABI39_RS02800	COG3525	Glycosyl hydrolase, family 20, catalytic domain
ABI39_RS02805	COG3119	arylsulfatase activity
ABI39_RS02810	COG0702	epimerase
ABI39_RS02815	COG4771	TonB-dependent receptor
ABI39_RS02820	COG0657	acetylesterase activity
ABI39_RS02820	COG2755	lipolytic protein G-D-S-L family
ABI39_RS02825	COG0745	RESPONSE REGULATOR receiver
ABI39_RS02825	COG2205	protein histidine kinase activity
ABI39_RS02825	COG3292	Two component regulator propeller
ABI39_RS02845	COG0564	pseudouridine synthase activity
ABI39_RS02850	COG1181	Belongs to the D-alanine--D-alanine ligase family
ABI39_RS02870	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ABI39_RS02875	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ABI39_RS02880	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
ABI39_RS02885	COG0561	phosphatase activity
ABI39_RS02910	COG4206	TonB-dependent receptor
ABI39_RS02910	COG1629	transport
ABI39_RS02920	COG4771	TonB-dependent receptor
ABI39_RS02940	COG1629	transport
ABI39_RS02940	COG4206	TonB-dependent receptor
ABI39_RS02950	COG1629	transport
ABI39_RS02950	COG4206	TonB-dependent receptor
ABI39_RS02955	COG1368	sulfuric ester hydrolase activity
ABI39_RS02960	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
ABI39_RS02965	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABI39_RS02970	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
ABI39_RS02975	COG0137	argininosuccinate synthase activity
ABI39_RS02985	COG1438	arginine binding
ABI39_RS02990	COG1070	Carbohydrate kinase
ABI39_RS02995	COG4806	L-rhamnose isomerase
ABI39_RS03005	COG0235	Class ii aldolase
ABI39_RS03020	COG0702	epimerase
ABI39_RS03025	COG4206	TonB-dependent receptor
ABI39_RS03025	COG1629	transport
ABI39_RS03030	COG0745	RESPONSE REGULATOR receiver
ABI39_RS03030	COG3292	Two component regulator propeller
ABI39_RS03030	COG2205	protein histidine kinase activity
ABI39_RS03040	COG1388	LysM domain
ABI39_RS03040	COG0741	lytic transglycosylase activity
ABI39_RS03045	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABI39_RS03050	COG3250	beta-galactosidase activity
ABI39_RS03140	COG4974	Belongs to the 'phage' integrase family
ABI39_RS03195	COG1185	polyribonucleotide nucleotidyltransferase activity
ABI39_RS03230	COG0673	inositol 2-dehydrogenase activity
ABI39_RS03245	COG0656	L-ascorbic acid biosynthetic process
ABI39_RS03250	COG0656	L-ascorbic acid biosynthetic process
ABI39_RS03255	COG1028	Short-chain dehydrogenase reductase Sdr
ABI39_RS03260	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABI39_RS03265	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
ABI39_RS03275	COG1082	Xylose isomerase domain protein TIM barrel
ABI39_RS03300	COG4771	TonB-dependent receptor
ABI39_RS03310	COG3537	Alpha-1,2-mannosidase
ABI39_RS03340	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
ABI39_RS03345	COG0542	response to heat
ABI39_RS03350	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
ABI39_RS03360	COG0534	Mate efflux family protein
ABI39_RS03370	COG2197	response regulator
ABI39_RS03375	COG3345	alpha-galactosidase
ABI39_RS03400	COG0561	phosphatase activity
ABI39_RS03405	COG4771	TonB-dependent receptor
ABI39_RS03450	COG0702	epimerase
ABI39_RS03455	COG1629	transport
ABI39_RS03465	COG3292	Two component regulator propeller
ABI39_RS03465	COG2205	protein histidine kinase activity
ABI39_RS03465	COG0745	RESPONSE REGULATOR receiver
ABI39_RS03465	COG0745	RESPONSE REGULATOR receiver
ABI39_RS03465	COG2205	protein histidine kinase activity
ABI39_RS03465	COG3292	Two component regulator propeller
ABI39_RS03470	COG4948	Mandelate Racemase Muconate Lactonizing
ABI39_RS03475	COG0457	Tetratricopeptide repeat
ABI39_RS03480	COG2814	Major facilitator Superfamily
ABI39_RS03490	COG3537	Alpha-1,2-mannosidase
ABI39_RS03495	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
ABI39_RS03495	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABI39_RS03545	COG2873	o-acetylhomoserine
ABI39_RS03560	COG1595	DNA-templated transcription, initiation
ABI39_RS03595	COG0203	ribosomal protein L17
ABI39_RS03600	COG0202	RNA polymerase activity
ABI39_RS03605	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ABI39_RS03610	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ABI39_RS03615	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
ABI39_RS03620	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ABI39_RS03635	COG0200	Binds to the 23S rRNA
ABI39_RS03640	COG1841	ribosomal large subunit assembly
ABI39_RS03645	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
ABI39_RS03650	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
ABI39_RS03655	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
ABI39_RS03660	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
ABI39_RS03665	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
ABI39_RS03670	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
ABI39_RS03675	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
ABI39_RS03680	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
ABI39_RS03685	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ABI39_RS03690	COG0255	Belongs to the universal ribosomal protein uL29 family
ABI39_RS03695	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
ABI39_RS03700	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
ABI39_RS03705	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
ABI39_RS03710	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
ABI39_RS03715	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
ABI39_RS03720	COG0089	rRNA binding
ABI39_RS03725	COG0088	Forms part of the polypeptide exit tunnel
ABI39_RS03730	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
ABI39_RS03735	COG0051	transcription antitermination factor activity, RNA binding
ABI39_RS03740	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ABI39_RS03745	COG0049	tRNA binding
ABI39_RS03750	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
ABI39_RS03760	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ABI39_RS03765	COG0085	RNA polymerase activity
ABI39_RS03770	COG0222	ribosome binding
ABI39_RS03775	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ABI39_RS03780	COG0081	regulation of translation
ABI39_RS03785	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ABI39_RS03805	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ABI39_RS03835	COG4974	Belongs to the 'phage' integrase family
ABI39_RS03840	COG0828	Belongs to the bacterial ribosomal protein bS21 family
ABI39_RS03850	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ABI39_RS03865	COG0745	RESPONSE REGULATOR receiver
ABI39_RS03870	COG5002	protein histidine kinase activity
ABI39_RS03880	COG0793	Belongs to the peptidase S41A family
ABI39_RS03885	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABI39_RS03920	COG4206	TonB-dependent receptor
ABI39_RS03920	COG1629	transport
ABI39_RS03925	COG0702	epimerase
ABI39_RS03930	COG0584	glycerophosphoryl diester phosphodiesterase
ABI39_RS03935	COG3537	Alpha-1,2-mannosidase
ABI39_RS03955	COG0745	RESPONSE REGULATOR receiver
ABI39_RS03955	COG3292	Two component regulator propeller
ABI39_RS03955	COG2205	protein histidine kinase activity
ABI39_RS03965	COG4771	TonB-dependent receptor
ABI39_RS03970	COG0702	epimerase
ABI39_RS03990	COG3634	alkyl hydroperoxide reductase activity
ABI39_RS04000	COG0148	phosphopyruvate hydratase activity
ABI39_RS04030	COG3250	beta-galactosidase activity
ABI39_RS04045	COG4206	TonB-dependent receptor
ABI39_RS04045	COG1629	transport
ABI39_RS04050	COG3292	Two component regulator propeller
ABI39_RS04050	COG2205	protein histidine kinase activity
ABI39_RS04050	COG0745	RESPONSE REGULATOR receiver
ABI39_RS04090	COG3250	beta-galactosidase activity
ABI39_RS04095	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABI39_RS04100	COG4771	TonB-dependent receptor
ABI39_RS04105	COG0745	RESPONSE REGULATOR receiver
ABI39_RS04105	COG2205	protein histidine kinase activity
ABI39_RS04105	COG3292	Two component regulator propeller
ABI39_RS04110	COG0358	DNA primase activity
ABI39_RS04145	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABI39_RS04155	COG1185	polyribonucleotide nucleotidyltransferase activity
ABI39_RS04160	COG1773	rubredoxin
ABI39_RS04165	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ABI39_RS04170	COG0545	Peptidyl-prolyl cis-trans isomerase
ABI39_RS04175	COG0545	Peptidyl-prolyl cis-trans isomerase
ABI39_RS04185	COG3328	transposase activity
ABI39_RS04195	COG1283	sodium-dependent phosphate transmembrane transporter activity
ABI39_RS04200	COG1283	sodium-dependent phosphate transmembrane transporter activity
ABI39_RS04205	COG0572	uridine kinase
ABI39_RS04225	COG0006	proline dipeptidase activity
ABI39_RS04240	COG0509	glycine decarboxylation via glycine cleavage system
ABI39_RS04245	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
ABI39_RS04250	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
ABI39_RS04255	COG2066	Belongs to the glutaminase family
ABI39_RS04260	COG0724	RNA recognition motif
ABI39_RS04285	COG3063	Type IV pilus biogenesis stability protein PilW
ABI39_RS04290	COG0756	dUTP diphosphatase activity
ABI39_RS04310	COG2001	Belongs to the MraZ family
ABI39_RS04315	COG0275	rRNA processing
ABI39_RS04325	COG0768	penicillin binding
ABI39_RS04330	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABI39_RS04335	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABI39_RS04340	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ABI39_RS04345	COG0772	Belongs to the SEDS family
ABI39_RS04350	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ABI39_RS04355	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ABI39_RS04370	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ABI39_RS04380	COG1381	Involved in DNA repair and RecF pathway recombination
ABI39_RS04390	COG0268	Binds directly to 16S ribosomal RNA
ABI39_RS04395	COG0187	DNA topoisomerase II activity
ABI39_RS04400	COG1640	4-alpha-glucanotransferase
ABI39_RS04430	COG0366	Alpha amylase catalytic
ABI39_RS04435	COG1082	Xylose isomerase domain protein TIM barrel
ABI39_RS04445	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABI39_RS04455	COG1629	transport
ABI39_RS04455	COG4206	TonB-dependent receptor
ABI39_RS04460	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABI39_RS04475	COG0366	Alpha amylase catalytic
ABI39_RS04505	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
ABI39_RS04515	COG2407	Converts the aldose L-fucose into the corresponding ketose L-fuculose
ABI39_RS04525	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ABI39_RS04535	COG4206	TonB-dependent receptor
ABI39_RS04535	COG1629	transport
ABI39_RS04540	COG0702	epimerase
ABI39_RS04550	COG2431	L-lysine efflux transmembrane transporter activity
ABI39_RS04555	COG3250	beta-galactosidase activity
ABI39_RS04560	COG3408	Glycogen debranching enzyme
ABI39_RS04560	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
ABI39_RS04575	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ABI39_RS04580	COG0719	Fe-S assembly protein
ABI39_RS04585	COG0396	ATPase activity
ABI39_RS04590	COG0719	Fe-S assembly protein
ABI39_RS04600	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
ABI39_RS04605	COG0195	Participates in both transcription termination and antitermination
ABI39_RS04610	COG0779	Required for maturation of 30S ribosomal subunits
ABI39_RS04620	COG2814	Major facilitator Superfamily
ABI39_RS04660	COG3458	cephalosporin-C deacetylase activity
ABI39_RS04680	COG1595	DNA-templated transcription, initiation
ABI39_RS04685	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ABI39_RS04690	COG1166	arginine decarboxylase activity
ABI39_RS04695	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
ABI39_RS04715	COG2816	NAD+ diphosphatase activity
ABI39_RS04720	COG1253	flavin adenine dinucleotide binding
ABI39_RS04730	COG1522	sequence-specific DNA binding
ABI39_RS04780	COG3426	butyrate kinase activity
ABI39_RS04785	COG0280	phosphate acetyltransferase
ABI39_RS04790	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
ABI39_RS04800	COG2166	iron-sulfur cluster assembly
ABI39_RS04825	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
ABI39_RS04885	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
ABI39_RS04890	COG1011	Hydrolase
ABI39_RS04895	COG0196	riboflavin kinase activity
ABI39_RS04930	COG3655	Transcriptional regulator
ABI39_RS04970	COG2255	four-way junction helicase activity
ABI39_RS04975	COG4974	Belongs to the 'phage' integrase family
ABI39_RS05090	COG0482	sulfurtransferase activity
ABI39_RS05095	COG0308	aminopeptidase N
ABI39_RS05110	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
ABI39_RS05110	COG0517	IMP dehydrogenase activity
ABI39_RS05120	COG0612	Peptidase, M16
ABI39_RS05130	COG0745	RESPONSE REGULATOR receiver
ABI39_RS05135	COG3119	arylsulfatase activity
ABI39_RS05145	COG4771	TonB-dependent receptor
ABI39_RS05150	COG1312	Catalyzes the dehydration of D-mannonate
ABI39_RS05155	COG1028	Short-chain dehydrogenase reductase Sdr
ABI39_RS05165	COG0681	Belongs to the peptidase S26 family
ABI39_RS05170	COG0681	Belongs to the peptidase S26 family
ABI39_RS05175	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
ABI39_RS05190	COG0584	glycerophosphoryl diester phosphodiesterase
ABI39_RS05200	COG1454	alcohol dehydrogenase
ABI39_RS05220	COG0758	DNA mediated transformation
ABI39_RS05220	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ABI39_RS05265	COG1053	succinate dehydrogenase
ABI39_RS05280	COG3409	Peptidoglycan-binding domain 1 protein
ABI39_RS05280	COG0793	Belongs to the peptidase S41A family
ABI39_RS05285	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ABI39_RS05315	COG3279	Response regulator of the LytR AlgR family
ABI39_RS05360	COG0700	Nucleoside recognition
ABI39_RS05365	COG5002	protein histidine kinase activity
ABI39_RS05370	COG0745	RESPONSE REGULATOR receiver
ABI39_RS05390	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
ABI39_RS05400	COG2268	Band 7 protein
ABI39_RS05405	COG0445	tRNA wobble uridine modification
ABI39_RS05410	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ABI39_RS05415	COG0322	excinuclease ABC activity
ABI39_RS05420	COG1490	D-aminoacyl-tRNA deacylase activity
ABI39_RS05425	COG1694	Mazg nucleotide pyrophosphohydrolase
ABI39_RS05435	COG0142	geranyltranstransferase activity
ABI39_RS05440	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ABI39_RS05440	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ABI39_RS05450	COG0012	GTP binding
ABI39_RS05460	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
ABI39_RS05500	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
ABI39_RS05520	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ABI39_RS05530	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
ABI39_RS05535	COG0594	ribonuclease P activity
ABI39_RS05550	COG1611	Belongs to the LOG family
ABI39_RS05555	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ABI39_RS05560	COG2814	Major facilitator Superfamily
ABI39_RS05605	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ABI39_RS05610	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
ABI39_RS05615	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ABI39_RS05620	COG1968	undecaprenyl-diphosphatase activity
ABI39_RS05630	COG2177	Part of the ABC transporter FtsEX involved in
ABI39_RS05640	COG1983	PspC domain protein
ABI39_RS05645	COG0545	Peptidyl-prolyl cis-trans isomerase
ABI39_RS05650	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ABI39_RS05660	COG0427	acetyl-CoA hydrolase
ABI39_RS05665	COG1472	Belongs to the glycosyl hydrolase 3 family
ABI39_RS05670	COG0488	(ABC) transporter
ABI39_RS05675	COG3119	arylsulfatase activity
ABI39_RS05680	COG3119	arylsulfatase activity
ABI39_RS05690	COG4206	TonB-dependent receptor
ABI39_RS05690	COG1629	transport
ABI39_RS05700	COG1595	DNA-templated transcription, initiation
ABI39_RS05705	COG4946	Tricorn protease homolog
ABI39_RS05705	COG0793	Belongs to the peptidase S41A family
ABI39_RS05710	COG0702	epimerase
ABI39_RS05715	COG1629	transport
ABI39_RS05720	COG3250	beta-galactosidase activity
ABI39_RS05725	COG3292	Two component regulator propeller
ABI39_RS05725	COG2205	protein histidine kinase activity
ABI39_RS05725	COG0745	RESPONSE REGULATOR receiver
ABI39_RS05725	COG3292	Two component regulator propeller
ABI39_RS05725	COG2205	protein histidine kinase activity
ABI39_RS05725	COG0745	RESPONSE REGULATOR receiver
ABI39_RS05735	COG0495	leucyl-tRNA aminoacylation
ABI39_RS05740	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
ABI39_RS05750	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ABI39_RS05755	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
ABI39_RS05775	COG0731	radical SAM domain protein
ABI39_RS05775	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ABI39_RS05785	COG5002	protein histidine kinase activity
ABI39_RS05830	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABI39_RS05845	COG0659	secondary active sulfate transmembrane transporter activity
ABI39_RS05855	COG1592	Rubrerythrin
ABI39_RS05860	COG0745	RESPONSE REGULATOR receiver
ABI39_RS05860	COG3292	Two component regulator propeller
ABI39_RS05860	COG2205	protein histidine kinase activity
ABI39_RS05900	COG4206	TonB-dependent receptor
ABI39_RS05900	COG1629	transport
ABI39_RS05905	COG0702	epimerase
ABI39_RS05915	COG4948	Mandelate Racemase Muconate Lactonizing
ABI39_RS05945	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
ABI39_RS05970	COG2027	D-alanyl-D-alanine carboxypeptidase
ABI39_RS05975	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
ABI39_RS05980	COG1028	Short-chain dehydrogenase reductase Sdr
ABI39_RS05985	COG4677	pectinesterase activity
ABI39_RS05990	COG4771	TonB-dependent receptor
ABI39_RS05995	COG0561	phosphatase activity
ABI39_RS06010	COG0726	polysaccharide deacetylase
ABI39_RS06040	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
ABI39_RS06040	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABI39_RS06060	COG1506	peptidase
ABI39_RS06060	COG0823	Involved in the tonB-independent uptake of proteins
ABI39_RS06065	COG0116	Belongs to the methyltransferase superfamily
ABI39_RS06075	COG0583	DNA-binding transcription factor activity
ABI39_RS06080	COG0783	Belongs to the Dps family
ABI39_RS06090	COG4251	negative regulation of phosphorylation
ABI39_RS06095	COG1045	serine acetyltransferase
ABI39_RS06100	COG0557	exoribonuclease II activity
ABI39_RS06105	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
ABI39_RS06125	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABI39_RS06130	COG0826	peptidase U32
ABI39_RS06140	COG1629	transport
ABI39_RS06145	COG0018	arginyl-trna synthetase
ABI39_RS06150	COG0328	RNA-DNA hybrid ribonuclease activity
ABI39_RS06150	COG3341	Caulimovirus viroplasmin
ABI39_RS06160	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
ABI39_RS06170	COG0463	Glycosyl transferase, family 2
ABI39_RS06180	COG1215	transferase activity, transferring glycosyl groups
ABI39_RS06190	COG1132	(ABC) transporter
ABI39_RS06235	COG0562	UDP-galactopyranose mutase
ABI39_RS06250	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABI39_RS06305	COG1629	transport
ABI39_RS06305	COG4206	TonB-dependent receptor
ABI39_RS06315	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ABI39_RS06320	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABI39_RS06325	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ABI39_RS06330	COG0571	ribonuclease III activity
ABI39_RS06335	COG3119	arylsulfatase activity
ABI39_RS06350	COG3119	arylsulfatase activity
ABI39_RS06365	COG1629	transport
ABI39_RS06365	COG4206	TonB-dependent receptor
ABI39_RS06370	COG2205	protein histidine kinase activity
ABI39_RS06370	COG3292	Two component regulator propeller
ABI39_RS06370	COG0745	RESPONSE REGULATOR receiver
ABI39_RS06375	COG0205	6-phosphofructokinase activity
ABI39_RS06450	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ABI39_RS06480	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ABI39_RS06535	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABI39_RS06540	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ABI39_RS06555	COG0215	cysteine-tRNA ligase activity
ABI39_RS06575	COG1629	transport
ABI39_RS06575	COG4206	TonB-dependent receptor
ABI39_RS06580	COG1082	Xylose isomerase domain protein TIM barrel
ABI39_RS06585	COG0745	RESPONSE REGULATOR receiver
ABI39_RS06585	COG3292	Two component regulator propeller
ABI39_RS06585	COG2205	protein histidine kinase activity
ABI39_RS06590	COG3507	Belongs to the glycosyl hydrolase 43 family
ABI39_RS06600	COG3119	arylsulfatase activity
ABI39_RS06605	COG0482	sulfurtransferase activity
ABI39_RS06615	COG3250	beta-galactosidase activity
ABI39_RS06620	COG0776	regulation of translation
ABI39_RS06640	COG0339	signal peptide processing
ABI39_RS06645	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ABI39_RS06655	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABI39_RS06670	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
ABI39_RS06670	COG0674	pyruvate-flavodoxin oxidoreductase activity
ABI39_RS06675	COG1013	pyruvate-flavodoxin oxidoreductase activity
ABI39_RS06680	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
ABI39_RS06685	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
ABI39_RS06695	COG1217	gtp-binding protein TYPA
ABI39_RS06700	COG3292	Two component regulator propeller
ABI39_RS06700	COG2205	protein histidine kinase activity
ABI39_RS06700	COG0745	RESPONSE REGULATOR receiver
ABI39_RS06720	COG4974	Belongs to the 'phage' integrase family
ABI39_RS06765	COG5290	Psort location Cytoplasmic, score
ABI39_RS06900	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
ABI39_RS06905	COG1854	S-ribosylhomocysteine lyase activity
ABI39_RS06910	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABI39_RS06925	COG0438	transferase activity, transferring glycosyl groups
ABI39_RS06940	COG3475	LICD family
ABI39_RS07000	COG4974	Belongs to the 'phage' integrase family
ABI39_RS07005	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
ABI39_RS07020	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
ABI39_RS07035	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABI39_RS07055	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ABI39_RS07065	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABI39_RS07065	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABI39_RS07070	COG2890	protein-(glutamine-N5) methyltransferase activity
ABI39_RS07080	COG1040	competence protein
ABI39_RS07085	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
ABI39_RS07095	COG0165	Argininosuccinate lyase
ABI39_RS07100	COG0667	Aldo Keto reductase
ABI39_RS07135	COG3292	Two component regulator propeller
ABI39_RS07135	COG2205	protein histidine kinase activity
ABI39_RS07135	COG3292	Two component regulator propeller
ABI39_RS07135	COG2205	protein histidine kinase activity
ABI39_RS07135	COG0745	RESPONSE REGULATOR receiver
ABI39_RS07135	COG0745	RESPONSE REGULATOR receiver
ABI39_RS07155	COG1472	Belongs to the glycosyl hydrolase 3 family
ABI39_RS07160	COG4771	TonB-dependent receptor
ABI39_RS07175	COG0519	Catalyzes the synthesis of GMP from XMP
ABI39_RS07180	COG0745	RESPONSE REGULATOR receiver
ABI39_RS07180	COG2205	protein histidine kinase activity
ABI39_RS07180	COG3292	Two component regulator propeller
ABI39_RS07250	COG4804	nuclease activity
ABI39_RS07255	COG4974	Belongs to the 'phage' integrase family
ABI39_RS07280	COG0358	DNA primase activity
ABI39_RS07415	COG3189	MarR family transcriptional regulator
ABI39_RS07420	COG0439	Biotin carboxylase
ABI39_RS07430	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABI39_RS07445	COG2096	Adenosyltransferase
ABI39_RS07610	COG0656	L-ascorbic acid biosynthetic process
ABI39_RS07615	COG1064	alcohol dehydrogenase
ABI39_RS07625	COG0546	phosphoglycolate phosphatase activity
ABI39_RS07640	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ABI39_RS07670	COG1629	transport
ABI39_RS07710	COG4771	TonB-dependent receptor
ABI39_RS07730	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ABI39_RS07735	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
ABI39_RS07740	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ABI39_RS07750	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABI39_RS07755	COG1519	Transferase
ABI39_RS07795	COG1022	Amp-dependent synthetase and ligase
ABI39_RS07805	COG2954	triphosphatase activity
ABI39_RS07825	COG0733	neurotransmitter:sodium symporter activity
ABI39_RS07835	COG1785	Belongs to the alkaline phosphatase family
ABI39_RS07850	COG4974	Belongs to the 'phage' integrase family
ABI39_RS07910	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ABI39_RS07915	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
ABI39_RS07920	COG1663	tetraacyldisaccharide 4'-kinase activity
ABI39_RS07925	COG0616	signal peptide processing
ABI39_RS07980	COG0811	peptide transport
ABI39_RS08010	COG1131	(ABC) transporter
ABI39_RS08030	COG0534	Mate efflux family protein
ABI39_RS08040	COG1187	pseudouridine synthase activity
ABI39_RS08045	COG0017	Asparaginyl-tRNA synthetase
ABI39_RS08065	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ABI39_RS08070	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ABI39_RS08075	COG0052	Belongs to the universal ribosomal protein uS2 family
ABI39_RS08080	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ABI39_RS08090	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
ABI39_RS08095	COG0179	Fumarylacetoacetate (FAA) hydrolase
ABI39_RS08100	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
ABI39_RS08105	COG1575	Belongs to the MenA family. Type 1 subfamily
ABI39_RS08110	COG1408	metallophosphoesterase
ABI39_RS08120	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
ABI39_RS08130	COG0194	GDP metabolic process
ABI39_RS08140	COG1214	PFAM Peptidase M22, glycoprotease
ABI39_RS08150	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ABI39_RS08155	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ABI39_RS08160	COG0739	heme binding
ABI39_RS08165	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
ABI39_RS08170	COG0750	zinc metalloprotease
ABI39_RS08185	COG1272	protein, Hemolysin III
ABI39_RS08190	COG0617	tRNA 3'-terminal CCA addition
ABI39_RS08200	COG0632	four-way junction helicase activity
ABI39_RS08205	COG0673	inositol 2-dehydrogenase activity
ABI39_RS08210	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
ABI39_RS08225	COG1621	beta-fructofuranosidase activity
ABI39_RS08235	COG1105	Belongs to the carbohydrate kinase PfkB family
ABI39_RS08240	COG2205	protein histidine kinase activity
ABI39_RS08240	COG3292	Two component regulator propeller
ABI39_RS08240	COG0745	RESPONSE REGULATOR receiver
ABI39_RS08250	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
ABI39_RS08260	COG0254	rRNA binding
ABI39_RS08265	COG0191	fructose-bisphosphate aldolase activity
ABI39_RS08310	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ABI39_RS08310	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ABI39_RS08320	COG0563	adenylate kinase activity
ABI39_RS08325	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ABI39_RS08330	COG1496	oxidoreductase activity
ABI39_RS08365	COG0138	bifunctional purine biosynthesis protein purh
ABI39_RS08415	COG1482	cell wall glycoprotein biosynthetic process
ABI39_RS08420	COG2706	6-phosphogluconolactonase activity
ABI39_RS08435	COG0523	cobalamin synthesis protein
ABI39_RS08450	COG1629	transport
ABI39_RS08450	COG4206	TonB-dependent receptor
ABI39_RS08480	COG2205	protein histidine kinase activity
ABI39_RS08480	COG3850	Histidine kinase
ABI39_RS08480	COG4999	Histidine kinase
ABI39_RS08480	COG3437	response regulator, receiver
ABI39_RS08485	COG5002	protein histidine kinase activity
ABI39_RS08490	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
ABI39_RS08495	COG1007	ATP synthesis coupled electron transport
ABI39_RS08500	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABI39_RS08505	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABI39_RS08515	COG0839	Belongs to the complex I subunit 6 family
ABI39_RS08520	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABI39_RS08525	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
ABI39_RS08530	COG0649	NAD binding
ABI39_RS08535	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABI39_RS08540	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABI39_RS08550	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABI39_RS08555	COG0569	domain protein
ABI39_RS08560	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ABI39_RS08570	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABI39_RS08585	COG3250	beta-galactosidase activity
ABI39_RS08600	COG3119	arylsulfatase activity
ABI39_RS08605	COG0702	epimerase
ABI39_RS08610	COG1629	transport
ABI39_RS08610	COG4206	TonB-dependent receptor
ABI39_RS08645	COG4206	TonB-dependent receptor
ABI39_RS08645	COG1629	transport
ABI39_RS08680	COG4974	Belongs to the 'phage' integrase family
ABI39_RS08715	COG0551	DNA topoisomerase type I activity
ABI39_RS08715	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ABI39_RS08735	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABI39_RS08735	COG0784	Response regulator, receiver
ABI39_RS08735	COG2205	protein histidine kinase activity
ABI39_RS08735	COG2198	Histidine kinase
ABI39_RS08755	COG0519	Catalyzes the synthesis of GMP from XMP
ABI39_RS08850	COG0358	DNA primase activity
ABI39_RS08910	COG4206	TonB-dependent receptor
ABI39_RS08910	COG1629	transport
ABI39_RS08915	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABI39_RS08920	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
ABI39_RS08945	COG0745	RESPONSE REGULATOR receiver
ABI39_RS08945	COG3292	Two component regulator propeller
ABI39_RS08945	COG2205	protein histidine kinase activity
ABI39_RS08955	COG3250	beta-galactosidase activity
ABI39_RS08960	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
ABI39_RS08970	COG3940	Belongs to the glycosyl hydrolase 43 family
ABI39_RS08970	COG3940	Belongs to the glycosyl hydrolase 43 family
ABI39_RS08985	COG1629	transport
ABI39_RS08995	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
ABI39_RS09010	COG3292	Two component regulator propeller
ABI39_RS09010	COG0745	RESPONSE REGULATOR receiver
ABI39_RS09010	COG2205	protein histidine kinase activity
ABI39_RS09015	COG1012	belongs to the aldehyde dehydrogenase family
ABI39_RS09040	COG2271	Major facilitator Superfamily
ABI39_RS09045	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
ABI39_RS09050	COG3775	system Galactitol-specific IIC component
ABI39_RS09055	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
ABI39_RS09060	COG4677	pectinesterase activity
ABI39_RS09065	COG1629	transport
ABI39_RS09075	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ABI39_RS09075	COG0515	serine threonine protein kinase
ABI39_RS09080	COG4771	TonB-dependent receptor
ABI39_RS09085	COG0702	epimerase
ABI39_RS09090	COG3507	Belongs to the glycosyl hydrolase 43 family
ABI39_RS09120	COG4771	TonB-dependent receptor
ABI39_RS09150	COG1917	Cupin 2, conserved barrel domain protein
ABI39_RS09165	COG2755	lipolytic protein G-D-S-L family
ABI39_RS09170	COG3292	Two component regulator propeller
ABI39_RS09170	COG0745	RESPONSE REGULATOR receiver
ABI39_RS09170	COG2205	protein histidine kinase activity
ABI39_RS09180	COG1506	peptidase
ABI39_RS09180	COG0823	Involved in the tonB-independent uptake of proteins
ABI39_RS09195	COG0138	bifunctional purine biosynthesis protein purh
ABI39_RS09215	COG0768	penicillin binding
ABI39_RS09220	COG0772	Belongs to the SEDS family
ABI39_RS09230	COG1774	PSP1 C-terminal conserved region
ABI39_RS09235	COG0470	DNA polymerase III
ABI39_RS09240	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ABI39_RS09270	COG0628	permease
ABI39_RS09275	COG1435	thymidine kinase activity
ABI39_RS09280	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
ABI39_RS09300	COG1629	transport
ABI39_RS09310	COG4206	TonB-dependent receptor
ABI39_RS09310	COG1629	transport
ABI39_RS09330	COG1629	transport
ABI39_RS09330	COG4206	TonB-dependent receptor
ABI39_RS09340	COG4974	Belongs to the 'phage' integrase family
ABI39_RS09390	COG4771	TonB-dependent receptor
ABI39_RS09400	COG4206	TonB-dependent receptor
ABI39_RS09400	COG1629	transport
ABI39_RS09435	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABI39_RS09440	COG1566	PFAM secretion protein HlyD family protein
ABI39_RS09450	COG1162	GTPase activity
ABI39_RS09455	COG0233	cytoplasmic translational termination
ABI39_RS09475	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
ABI39_RS09480	COG0528	UMP kinase activity
ABI39_RS09485	COG0534	Mate efflux family protein
ABI39_RS09495	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
ABI39_RS09495	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
ABI39_RS09505	COG0792	nuclease activity
ABI39_RS09525	COG1183	phosphatidylcholine synthase activity
ABI39_RS09530	COG0688	phosphatidylethanolamine metabolic process
ABI39_RS09560	COG0802	atpase or kinase
ABI39_RS09565	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABI39_RS09580	COG1830	Aldolase
ABI39_RS09585	COG0588	phosphoglycerate mutase activity
ABI39_RS09600	COG0475	glutathione-regulated potassium exporter activity
ABI39_RS09655	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
ABI39_RS09670	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABI39_RS09675	COG0742	ribosomal rna small subunit methyltransferase
ABI39_RS09695	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ABI39_RS09700	COG0739	heme binding
ABI39_RS09710	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABI39_RS09715	COG1705	Flagellar rod assembly protein muramidase FlgJ
ABI39_RS09715	COG1388	LysM domain
ABI39_RS09725	COG1475	DNA binding
ABI39_RS09730	COG1192	Involved in chromosome partitioning
ABI39_RS09735	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
ABI39_RS09740	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABI39_RS09755	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABI39_RS09770	COG1196	nuclear chromosome segregation
ABI39_RS09775	COG2239	Acts as a magnesium transporter
ABI39_RS09780	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ABI39_RS09790	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABI39_RS09795	COG0590	tRNA wobble adenosine to inosine editing
ABI39_RS09800	COG1396	sequence-specific DNA binding
ABI39_RS09810	COG3550	peptidyl-serine autophosphorylation
ABI39_RS09815	COG2373	Large extracellular alpha-helical protein
ABI39_RS09835	COG0205	6-phosphofructokinase activity
ABI39_RS09840	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
ABI39_RS09845	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
ABI39_RS09860	COG0084	hydrolase, TatD family'
ABI39_RS09870	COG0811	peptide transport
ABI39_RS09900	COG1522	sequence-specific DNA binding
ABI39_RS09910	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
ABI39_RS09920	COG1595	DNA-templated transcription, initiation
ABI39_RS09930	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ABI39_RS09930	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
ABI39_RS09955	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ABI39_RS09960	COG0538	isocitrate dehydrogenase activity
ABI39_RS09965	COG0372	Belongs to the citrate synthase family
ABI39_RS10010	COG0205	6-phosphofructokinase activity
ABI39_RS10015	COG0546	phosphoglycolate phosphatase activity
ABI39_RS10030	COG0511	ligase activity, forming carbon-carbon bonds
ABI39_RS10035	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
ABI39_RS10040	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABI39_RS10050	COG0561	phosphatase activity
ABI39_RS10055	COG4771	TonB-dependent receptor
ABI39_RS10085	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
ABI39_RS10105	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABI39_RS10110	COG1506	peptidase
ABI39_RS10110	COG0823	Involved in the tonB-independent uptake of proteins
ABI39_RS10115	COG1242	4 iron, 4 sulfur cluster binding
ABI39_RS10120	COG0426	domain, Protein
ABI39_RS10125	COG0668	transmembrane transport
ABI39_RS10130	COG0009	L-threonylcarbamoyladenylate synthase
ABI39_RS10135	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABI39_RS10195	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABI39_RS10200	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ABI39_RS10205	COG0066	3-isopropylmalate dehydratase activity
ABI39_RS10215	COG0473	3-isopropylmalate dehydrogenase activity
ABI39_RS10225	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ABI39_RS10235	COG0514	ATP-dependent DNA helicase (RecQ)
ABI39_RS10255	COG0735	belongs to the Fur family
ABI39_RS10260	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ABI39_RS10270	COG1629	transport
ABI39_RS10270	COG4206	TonB-dependent receptor
ABI39_RS10295	COG2755	lipolytic protein G-D-S-L family
ABI39_RS10310	COG4771	TonB-dependent receptor
ABI39_RS10325	COG0488	(ABC) transporter
ABI39_RS10330	COG3590	peptidase
ABI39_RS10340	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABI39_RS10355	COG0673	inositol 2-dehydrogenase activity
ABI39_RS10360	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
ABI39_RS10365	COG0826	peptidase U32
ABI39_RS10375	COG4771	TonB-dependent receptor
ABI39_RS10390	COG0095	Lipoate-protein ligase
ABI39_RS10395	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABI39_RS10400	COG0022	dehydrogenase e1 component
ABI39_RS10405	COG0716	FMN binding
ABI39_RS10410	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
ABI39_RS10420	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
ABI39_RS10430	COG0527	aspartate kinase activity
ABI39_RS10430	COG0460	homoserine dehydrogenase
ABI39_RS10435	COG3635	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
ABI39_RS10440	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ABI39_RS10450	COG1120	ATPase activity
ABI39_RS10455	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABI39_RS10480	COG1073	alpha beta
ABI39_RS10500	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
ABI39_RS10505	COG0436	Aminotransferase
ABI39_RS10515	COG1733	regulation of RNA biosynthetic process
ABI39_RS10525	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
ABI39_RS10530	COG0628	permease
ABI39_RS10540	COG3525	Glycosyl hydrolase, family 20, catalytic domain
ABI39_RS10545	COG0514	ATP-dependent DNA helicase (RecQ)
ABI39_RS10550	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ABI39_RS10550	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
ABI39_RS10560	COG0006	proline dipeptidase activity
ABI39_RS10575	COG1418	mRNA catabolic process
ABI39_RS10600	COG0602	queuosine metabolic process
ABI39_RS10630	COG2205	protein histidine kinase activity
ABI39_RS10630	COG0745	RESPONSE REGULATOR receiver
ABI39_RS10630	COG3292	Two component regulator propeller
ABI39_RS10640	COG3681	Belongs to the UPF0597 family
ABI39_RS10695	COG0702	epimerase
ABI39_RS10700	COG3250	beta-galactosidase activity
ABI39_RS10705	COG3292	Two component regulator propeller
ABI39_RS10705	COG0745	RESPONSE REGULATOR receiver
ABI39_RS10705	COG2205	protein histidine kinase activity
ABI39_RS10730	COG4771	TonB-dependent receptor
ABI39_RS10815	COG4206	TonB-dependent receptor
ABI39_RS10815	COG1629	transport
ABI39_RS10825	COG0126	phosphoglycerate kinase activity
ABI39_RS10835	COG3525	Glycosyl hydrolase, family 20, catalytic domain
ABI39_RS10860	COG0534	Mate efflux family protein
ABI39_RS10865	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ABI39_RS10870	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ABI39_RS10895	COG1629	transport
ABI39_RS10905	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABI39_RS10910	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABI39_RS10925	COG0745	RESPONSE REGULATOR receiver
ABI39_RS10925	COG2205	protein histidine kinase activity
ABI39_RS10925	COG3292	Two component regulator propeller
ABI39_RS10930	COG4771	TonB-dependent receptor
ABI39_RS10965	COG4372	Transposase
ABI39_RS11010	COG4372	Transposase
ABI39_RS11025	COG1091	dTDP-4-dehydrorhamnose reductase activity
ABI39_RS11035	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
ABI39_RS11070	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
ABI39_RS11075	COG1028	Short-chain dehydrogenase reductase Sdr
ABI39_RS11120	COG2244	polysaccharide biosynthetic process
ABI39_RS11135	COG0513	Belongs to the DEAD box helicase family
ABI39_RS11230	COG4974	Belongs to the 'phage' integrase family
ABI39_RS11255	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
ABI39_RS11270	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
ABI39_RS11270	COG0321	lipoyl(octanoyl) transferase activity
ABI39_RS11275	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ABI39_RS11280	COG1834	amidinotransferase
ABI39_RS11290	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABI39_RS11300	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ABI39_RS11315	COG4413	Urea transporter
ABI39_RS11320	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ABI39_RS11335	COG3591	Belongs to the peptidase S1B family
ABI39_RS11340	COG3591	Belongs to the peptidase S1B family
ABI39_RS11355	COG1408	metallophosphoesterase
ABI39_RS11360	COG1410	methionine synthase
ABI39_RS11360	COG0646	methionine synthase
ABI39_RS11365	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
ABI39_RS11370	COG0463	Glycosyl transferase, family 2
ABI39_RS11415	COG2311	Membrane
ABI39_RS11420	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ABI39_RS11430	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABI39_RS11450	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
ABI39_RS11460	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
ABI39_RS11465	COG1032	radical SAM domain protein
ABI39_RS11480	COG5434	Belongs to the glycosyl hydrolase 28 family
ABI39_RS11510	COG2264	protein methyltransferase activity
ABI39_RS11565	COG0673	inositol 2-dehydrogenase activity
ABI39_RS11570	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
ABI39_RS11615	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ABI39_RS11625	COG2160	L-arabinose isomerase activity
ABI39_RS11650	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
ABI39_RS11670	COG0484	heat shock protein binding
ABI39_RS11675	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ABI39_RS11680	COG0488	(ABC) transporter
ABI39_RS11695	COG0393	Putative heavy-metal-binding
ABI39_RS11730	COG1705	Flagellar rod assembly protein muramidase FlgJ
ABI39_RS11730	COG1388	LysM domain
ABI39_RS11740	COG1136	(ABC) transporter
ABI39_RS11745	COG0577	efflux transmembrane transporter activity
ABI39_RS11755	COG1136	(ABC) transporter
ABI39_RS11755	COG0577	efflux transmembrane transporter activity
ABI39_RS11765	COG1136	(ABC) transporter
ABI39_RS11765	COG0577	efflux transmembrane transporter activity
ABI39_RS11790	COG2204	response regulator
ABI39_RS11795	COG4191	Histidine kinase
ABI39_RS11810	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
ABI39_RS11815	COG0572	uridine kinase
ABI39_RS11830	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ABI39_RS11835	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ABI39_RS11840	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ABI39_RS11845	COG0131	Imidazoleglycerol-phosphate dehydratase
ABI39_RS11860	COG1592	Rubrerythrin
ABI39_RS11860	COG1773	rubredoxin
ABI39_RS11870	COG3118	belongs to the thioredoxin family
ABI39_RS11885	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABI39_RS11895	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
ABI39_RS11900	COG0157	Belongs to the NadC ModD family
ABI39_RS11905	COG2205	protein histidine kinase activity
ABI39_RS11905	COG0745	RESPONSE REGULATOR receiver
ABI39_RS11905	COG3292	Two component regulator propeller
ABI39_RS11915	COG4771	TonB-dependent receptor
ABI39_RS11930	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
ABI39_RS11935	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ABI39_RS11955	COG0443	Heat shock 70 kDa protein
ABI39_RS11995	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
ABI39_RS12015	COG1215	transferase activity, transferring glycosyl groups
ABI39_RS12025	COG0110	maltose O-acetyltransferase activity
ABI39_RS12045	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
ABI39_RS12105	COG0556	nucleotide-excision repair
ABI39_RS12125	COG4948	Mandelate Racemase Muconate Lactonizing
ABI39_RS12135	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
ABI39_RS12140	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
ABI39_RS12145	COG1169	isochorismate synthase
ABI39_RS12150	COG2050	protein possibly involved in aromatic compounds catabolism
ABI39_RS12155	COG0490	domain, Protein
ABI39_RS12155	COG0471	metal ion transport
ABI39_RS12160	COG0534	Mate efflux family protein
ABI39_RS12165	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABI39_RS12180	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ABI39_RS12190	COG4771	TonB-dependent receptor
ABI39_RS12200	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABI39_RS12215	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
ABI39_RS12220	COG1350	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
ABI39_RS12225	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABI39_RS12230	COG0569	domain protein
ABI39_RS12245	COG1760	l-serine dehydratase
ABI39_RS12265	COG4771	TonB-dependent receptor
ABI39_RS12290	COG2226	methyltransferase
ABI39_RS12295	COG0582	viral genome integration into host DNA
ABI39_RS12300	COG1193	negative regulation of DNA recombination
ABI39_RS12350	COG4804	nuclease activity
ABI39_RS12380	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
ABI39_RS12380	COG2755	lipolytic protein G-D-S-L family
ABI39_RS12390	COG2217	Heavy metal translocating P-type atpase
ABI39_RS12400	COG4221	oxidoreductase activity
ABI39_RS12410	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
ABI39_RS12415	COG0511	ligase activity, forming carbon-carbon bonds
ABI39_RS12425	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABI39_RS12440	COG0778	Nitroreductase
ABI39_RS12455	COG0561	phosphatase activity
ABI39_RS12460	COG0424	maF-like protein
ABI39_RS12465	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ABI39_RS12480	COG2814	Major facilitator Superfamily
ABI39_RS12485	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABI39_RS12490	COG1309	transcriptional regulator
ABI39_RS12500	COG0596	Alpha beta hydrolase
ABI39_RS12500	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABI39_RS12500	COG2226	methyltransferase
ABI39_RS12505	COG1132	(ABC) transporter
ABI39_RS12595	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
ABI39_RS12600	COG0646	methionine synthase
ABI39_RS12600	COG1410	methionine synthase
ABI39_RS12605	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ABI39_RS12615	COG2233	PERMEase
ABI39_RS12620	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ABI39_RS12635	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
ABI39_RS12635	COG0778	Nitroreductase
ABI39_RS12645	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
ABI39_RS12650	COG1704	LemA family
ABI39_RS12665	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ABI39_RS12670	COG2226	methyltransferase
ABI39_RS12675	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
ABI39_RS12680	COG1702	phosphate starvation-inducible protein PhoH
ABI39_RS12690	COG0101	tRNA pseudouridine synthase activity
ABI39_RS12705	COG1047	Peptidyl-prolyl cis-trans
ABI39_RS12715	COG0129	dihydroxy-acid dehydratase activity
ABI39_RS12735	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
ABI39_RS12760	COG1253	flavin adenine dinucleotide binding
ABI39_RS12780	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
ABI39_RS12795	COG0653	protein targeting
ABI39_RS12825	COG0525	valine-tRNA ligase activity
ABI39_RS12830	COG3956	TIGRFAM MazG family protein
ABI39_RS12840	COG1629	transport
ABI39_RS12840	COG4206	TonB-dependent receptor
ABI39_RS12855	COG1595	DNA-templated transcription, initiation
ABI39_RS12860	COG1234	tRNA 3'-trailer cleavage
ABI39_RS12870	COG0539	negative regulation of cytoplasmic translation
ABI39_RS12885	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
ABI39_RS12905	COG3275	phosphorelay sensor kinase activity
ABI39_RS12940	COG1216	Glycosyl transferase, family 2
ABI39_RS12940	COG0463	Glycosyl transferase, family 2
ABI39_RS12945	COG0820	rRNA (adenine-C2-)-methyltransferase activity
ABI39_RS12955	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
ABI39_RS12960	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ABI39_RS12985	COG0738	Major facilitator superfamily
ABI39_RS12990	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABI39_RS13000	COG2204	response regulator
ABI39_RS13020	COG0708	Exodeoxyribonuclease III
ABI39_RS13035	COG1741	Belongs to the pirin family
ABI39_RS13110	COG4974	Belongs to the 'phage' integrase family
ABI39_RS13125	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
ABI39_RS13135	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ABI39_RS13150	COG0793	Belongs to the peptidase S41A family
ABI39_RS13155	COG2131	deaminase
ABI39_RS13165	COG0339	signal peptide processing
ABI39_RS13180	COG1477	protein flavinylation
ABI39_RS13185	COG1971	Probably functions as a manganese efflux pump
ABI39_RS13200	COG0463	Glycosyl transferase, family 2
ABI39_RS13215	COG0514	ATP-dependent DNA helicase (RecQ)
ABI39_RS13225	COG0148	phosphopyruvate hydratase activity
ABI39_RS13235	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
ABI39_RS13245	COG3408	Glycogen debranching enzyme
ABI39_RS13270	COG0662	Cupin 2, conserved barrel domain protein
ABI39_RS13270	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
ABI39_RS13275	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABI39_RS13300	COG1216	Glycosyl transferase, family 2
ABI39_RS13305	COG0110	maltose O-acetyltransferase activity
ABI39_RS13310	COG0438	transferase activity, transferring glycosyl groups
ABI39_RS13330	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABI39_RS13340	COG3754	Rhamnan synthesis protein F
ABI39_RS13375	COG1091	dTDP-4-dehydrorhamnose reductase activity
ABI39_RS13415	COG3023	N-Acetylmuramoyl-L-alanine amidase
ABI39_RS13485	COG3250	beta-galactosidase activity
ABI39_RS13500	COG0490	domain, Protein
ABI39_RS13500	COG2985	domain, Protein
ABI39_RS13505	COG4206	TonB-dependent receptor
ABI39_RS13505	COG1629	transport
ABI39_RS13515	COG4771	TonB-dependent receptor
ABI39_RS13525	COG3250	beta-galactosidase activity
ABI39_RS13530	COG3250	beta-galactosidase activity
ABI39_RS13535	COG3940	Belongs to the glycosyl hydrolase 43 family
ABI39_RS13560	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ABI39_RS13565	COG0110	maltose O-acetyltransferase activity
ABI39_RS13595	COG1216	Glycosyl transferase, family 2
ABI39_RS13600	COG0438	transferase activity, transferring glycosyl groups
ABI39_RS13605	COG1216	Glycosyl transferase, family 2
ABI39_RS13610	COG0463	Glycosyl transferase, family 2
ABI39_RS13615	COG0438	transferase activity, transferring glycosyl groups
ABI39_RS13635	COG1216	Glycosyl transferase, family 2
ABI39_RS13655	COG1216	Glycosyl transferase, family 2
ABI39_RS13660	COG0438	transferase activity, transferring glycosyl groups
ABI39_RS13670	COG0463	Glycosyl transferase, family 2
ABI39_RS13695	COG3206	protein involved in exopolysaccharide biosynthesis
ABI39_RS13695	COG0489	protein tyrosine kinase activity
ABI39_RS13705	COG1132	(ABC) transporter
ABI39_RS13755	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ABI39_RS13785	COG0598	Magnesium transport protein CorA
ABI39_RS13790	COG1522	sequence-specific DNA binding
ABI39_RS13800	COG0586	Pfam SNARE associated Golgi protein
ABI39_RS13810	COG0306	phosphate transporter
ABI39_RS13815	COG4771	TonB-dependent receptor
ABI39_RS13825	COG2873	o-acetylhomoserine
ABI39_RS13830	COG1620	l-lactate permease
ABI39_RS13850	COG2205	protein histidine kinase activity
ABI39_RS13875	COG0668	transmembrane transport
ABI39_RS13880	COG0318	PFAM AMP-dependent synthetase and ligase
ABI39_RS13890	COG0307	riboflavin synthase, alpha
ABI39_RS13895	COG1295	ribonuclease BN
ABI39_RS13915	COG0484	heat shock protein binding
ABI39_RS13925	COG0737	Belongs to the 5'-nucleotidase family
ABI39_RS13935	COG4771	TonB-dependent receptor
ABI39_RS13940	COG1509	lysine 2,3-aminomutase activity
ABI39_RS13950	COG3408	Glycogen debranching enzyme
ABI39_RS13965	COG2205	protein histidine kinase activity
ABI39_RS13965	COG0784	Response regulator, receiver
ABI39_RS13975	COG3059	membrane
ABI39_RS13980	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABI39_RS13985	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ABI39_RS14005	COG1914	H( )-stimulated, divalent metal cation uptake system
ABI39_RS14010	COG3263	regulation of cellular component size
ABI39_RS14015	COG0534	Mate efflux family protein
ABI39_RS14025	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
ABI39_RS14035	COG0488	(ABC) transporter
ABI39_RS14110	COG0228	four-way junction DNA binding
ABI39_RS14120	COG2755	lipolytic protein G-D-S-L family
ABI39_RS14120	COG0657	acetylesterase activity
ABI39_RS14145	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
ABI39_RS14150	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABI39_RS14185	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
ABI39_RS14190	COG1333	cytochrome c biogenesis protein
ABI39_RS14190	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ABI39_RS14210	COG1730	sister chromatid segregation
ABI39_RS14225	COG0438	transferase activity, transferring glycosyl groups
ABI39_RS14240	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ABI39_RS14240	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
ABI39_RS14245	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ABI39_RS14245	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
ABI39_RS14260	COG2226	methyltransferase
ABI39_RS14275	COG0004	ammonium transporteR
ABI39_RS14280	COG0347	Belongs to the P(II) protein family
ABI39_RS14290	COG0436	Aminotransferase
ABI39_RS14295	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
ABI39_RS14300	COG1119	ATPase activity
ABI39_RS14305	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABI39_RS14310	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABI39_RS14320	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
ABI39_RS14325	COG0252	asparaginase activity
ABI39_RS14350	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
ABI39_RS14355	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
ABI39_RS14360	COG0363	glucosamine-6-phosphate deaminase activity
ABI39_RS14370	COG1271	oxidase subunit
ABI39_RS14385	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABI39_RS14390	COG1136	(ABC) transporter
ABI39_RS14395	COG1136	(ABC) transporter
ABI39_RS14395	COG0577	efflux transmembrane transporter activity
ABI39_RS14405	COG3279	Response regulator of the LytR AlgR family
ABI39_RS14420	COG4566	intracellular signal transduction
ABI39_RS14425	COG0247	lactate metabolic process
ABI39_RS14430	COG1139	Iron-sulfur cluster binding protein
ABI39_RS14445	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
ABI39_RS14470	COG0259	pyridoxamine-phosphate oxidase activity
ABI39_RS14480	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
ABI39_RS14480	COG1918	ferrous iron import across plasma membrane
ABI39_RS14495	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABI39_RS14500	COG0497	DNA recombination
ABI39_RS14550	COG0297	glycogen (starch) synthase activity
ABI39_RS14555	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
ABI39_RS14560	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
ABI39_RS14565	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
ABI39_RS14575	COG2816	NAD+ diphosphatase activity
ABI39_RS14580	COG2183	response to ionizing radiation
ABI39_RS14600	COG3250	beta-galactosidase activity
ABI39_RS14605	COG2205	protein histidine kinase activity
ABI39_RS14605	COG3292	Two component regulator propeller
ABI39_RS14605	COG0745	RESPONSE REGULATOR receiver
ABI39_RS14615	COG1629	transport
ABI39_RS14615	COG4206	TonB-dependent receptor
ABI39_RS14655	COG4771	TonB-dependent receptor
ABI39_RS14665	COG1629	transport
ABI39_RS14695	COG5012	cobalamin binding
ABI39_RS14700	COG1501	Belongs to the glycosyl hydrolase 31 family
ABI39_RS14715	COG0251	oxidation-reduction process
ABI39_RS14740	COG0488	(ABC) transporter
ABI39_RS14765	COG0110	maltose O-acetyltransferase activity
ABI39_RS14795	COG0438	transferase activity, transferring glycosyl groups
ABI39_RS14800	COG0438	transferase activity, transferring glycosyl groups
ABI39_RS14805	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABI39_RS14860	COG0218	Necessary for normal cell division and for the maintenance of normal septation
ABI39_RS14870	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ABI39_RS14885	COG1678	Uncharacterized ACR, COG1678
ABI39_RS14895	COG0745	RESPONSE REGULATOR receiver
ABI39_RS14895	COG2205	protein histidine kinase activity
ABI39_RS14895	COG2205	protein histidine kinase activity
ABI39_RS14895	COG3292	Two component regulator propeller
ABI39_RS14895	COG3292	Two component regulator propeller
ABI39_RS14895	COG0745	RESPONSE REGULATOR receiver
ABI39_RS14905	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
ABI39_RS14910	COG1151	hydroxylamine reductase activity
ABI39_RS14920	COG3119	arylsulfatase activity
ABI39_RS14930	COG0745	RESPONSE REGULATOR receiver
ABI39_RS14935	COG5002	protein histidine kinase activity
ABI39_RS14955	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
ABI39_RS14960	COG0248	Ppx GppA phosphatase
ABI39_RS14970	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
ABI39_RS14985	COG0356	it plays a direct role in the translocation of protons across the membrane
ABI39_RS14990	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ABI39_RS14995	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
ABI39_RS15000	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ABI39_RS15005	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
ABI39_RS15010	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
ABI39_RS15025	COG2425	protein containing a von Willebrand factor type A (vWA) domain
ABI39_RS15035	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
ABI39_RS15040	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABI39_RS15055	COG3973	AAA domain
ABI39_RS15060	COG2855	membrane
ABI39_RS15080	COG1979	alcohol dehydrogenase
ABI39_RS15085	COG2759	Belongs to the formate--tetrahydrofolate ligase family
ABI39_RS15100	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ABI39_RS15100	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ABI39_RS15105	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABI39_RS15110	COG0357	Ribosomal RNA small subunit methyltransferase G
ABI39_RS15120	COG2217	Heavy metal translocating P-type atpase
ABI39_RS15135	COG0321	lipoyl(octanoyl) transferase activity
ABI39_RS15140	COG1022	Amp-dependent synthetase and ligase
ABI39_RS15145	COG1252	NADH dehydrogenase
ABI39_RS15180	COG3617	BRO family, N-terminal domain
ABI39_RS15220	COG4974	Belongs to the 'phage' integrase family
ABI39_RS15265	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
ABI39_RS15270	COG1523	belongs to the glycosyl hydrolase 13 family
ABI39_RS15275	COG1312	Catalyzes the dehydration of D-mannonate
ABI39_RS15280	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABI39_RS15285	COG2176	DNA-directed DNA polymerase activity
ABI39_RS15290	COG1739	Uncharacterized protein family UPF0029
ABI39_RS15300	COG0556	nucleotide-excision repair
ABI39_RS15325	COG1388	LysM domain
ABI39_RS15325	COG3942	CHAP domain
ABI39_RS15335	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ABI39_RS15340	COG3104	oligopeptide transport
ABI39_RS15345	COG2431	L-lysine efflux transmembrane transporter activity
ABI39_RS15360	COG1757	Na H antiporter
ABI39_RS15365	COG2721	sulfolactate sulfo-lyase activity
ABI39_RS15370	COG1609	Transcriptional regulator
ABI39_RS15385	COG0501	Belongs to the peptidase M48B family
ABI39_RS15395	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ABI39_RS15405	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ABI39_RS15420	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABI39_RS15460	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
ABI39_RS15475	COG1904	glucuronate isomerase
ABI39_RS15480	COG0246	Mannitol dehydrogenase
ABI39_RS15500	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABI39_RS15505	COG1120	ATPase activity
ABI39_RS15510	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
ABI39_RS15540	COG2207	Transcriptional regulator
ABI39_RS15540	COG0662	Cupin 2, conserved barrel domain protein
ABI39_RS15545	COG4753	response regulator
ABI39_RS15545	COG2207	Transcriptional regulator
ABI39_RS15550	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ABI39_RS15560	COG4771	TonB-dependent receptor
ABI39_RS15565	COG4771	TonB-dependent receptor
ABI39_RS15570	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ABI39_RS15575	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABI39_RS15600	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABI39_RS15610	COG0439	Biotin carboxylase
ABI39_RS15635	COG4771	TonB-dependent receptor
ABI39_RS15640	COG4771	TonB-dependent receptor
ABI39_RS15650	COG1797	cobyrinic acid a,c-diamide synthase activity
ABI39_RS15655	COG2096	Adenosyltransferase
ABI39_RS15660	COG1492	cobalamin metabolic process
ABI39_RS15670	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
ABI39_RS15790	COG1061	Type III restriction enzyme res subunit
ABI39_RS15920	COG4680	protein conserved in bacteria
ABI39_RS16050	COG4974	Belongs to the 'phage' integrase family
ABI39_RS16105	COG4804	nuclease activity
ABI39_RS16120	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ABI39_RS16120	COG0551	DNA topoisomerase type I activity
ABI39_RS16135	COG4974	Belongs to the 'phage' integrase family
ABI39_RS16425	COG4974	Belongs to the 'phage' integrase family
ABI39_RS16455	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
ABI39_RS16490	COG0513	Belongs to the DEAD box helicase family
ABI39_RS16495	COG0560	Phosphoserine phosphatase
ABI39_RS16495	COG3830	Belongs to the UPF0237 family
ABI39_RS16505	COG1011	Hydrolase
ABI39_RS16515	COG0343	queuine tRNA-ribosyltransferase activity
ABI39_RS16520	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ABI39_RS16525	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
ABI39_RS16530	COG1597	lipid kinase activity
ABI39_RS16535	COG0156	8-amino-7-oxononanoate synthase activity
ABI39_RS16540	COG0697	spore germination
ABI39_RS16550	COG1136	(ABC) transporter
ABI39_RS16590	COG2204	response regulator
ABI39_RS16595	COG3852	Histidine kinase
ABI39_RS16610	COG4771	TonB-dependent receptor
ABI39_RS16630	COG2814	Major facilitator Superfamily
ABI39_RS16680	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
ABI39_RS16685	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABI39_RS16715	COG1757	Na H antiporter
ABI39_RS16720	COG3579	cysteine-type endopeptidase activity
ABI39_RS16730	COG2244	polysaccharide biosynthetic process
ABI39_RS16755	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ABI39_RS16765	COG0300	oxidoreductase activity
ABI39_RS16775	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ABI39_RS16810	COG0438	transferase activity, transferring glycosyl groups
ABI39_RS16875	COG1805	sodium ion transport
ABI39_RS16880	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
ABI39_RS16885	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
ABI39_RS16890	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
ABI39_RS16900	COG0513	Belongs to the DEAD box helicase family
ABI39_RS16905	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
ABI39_RS16910	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABI39_RS16925	COG3525	Glycosyl hydrolase, family 20, catalytic domain
ABI39_RS16940	COG0561	phosphatase activity
ABI39_RS16950	COG1285	pathogenesis
ABI39_RS16960	COG2205	protein histidine kinase activity
ABI39_RS16970	COG0494	nUDIX hydrolase
ABI39_RS16980	COG1733	regulation of RNA biosynthetic process
ABI39_RS17010	COG3387	PFAM Glycoside hydrolase 15-related
ABI39_RS17040	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
ABI39_RS17045	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
ABI39_RS17050	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
ABI39_RS17055	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
ABI39_RS17060	COG2204	response regulator
ABI39_RS17070	COG4176	ABC-type proline glycine betaine transport system permease component
ABI39_RS17080	COG0697	spore germination
ABI39_RS17085	COG0110	maltose O-acetyltransferase activity
ABI39_RS17095	COG0024	Methionine aminopeptidase
ABI39_RS17100	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
ABI39_RS17110	COG0227	Belongs to the bacterial ribosomal protein bL28 family
ABI39_RS17115	COG0267	Belongs to the bacterial ribosomal protein bL33 family
ABI39_RS17120	COG0552	protein localization to endoplasmic reticulum
ABI39_RS17125	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ABI39_RS17130	COG0776	regulation of translation
ABI39_RS17135	COG0776	regulation of translation
ABI39_RS17140	COG0714	Associated with various cellular activities
ABI39_RS17155	COG2304	oxidoreductase activity
ABI39_RS17180	COG0671	phosphoesterase, PA-phosphatase related
ABI39_RS17205	COG0542	response to heat
ABI39_RS17215	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABI39_RS17235	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABI39_RS17240	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ABI39_RS17245	COG0336	Belongs to the RNA methyltransferase TrmD family
ABI39_RS17250	COG0167	dihydroorotate dehydrogenase activity
ABI39_RS17255	COG0543	2 iron, 2 sulfur cluster binding
ABI39_RS17270	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABI39_RS17285	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABI39_RS17295	COG0390	transport system, permease component
ABI39_RS17300	COG1131	(ABC) transporter
ABI39_RS17305	COG0442	prolyl-tRNA aminoacylation
ABI39_RS17315	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ABI39_RS17330	COG0483	inositol monophosphate 1-phosphatase activity
ABI39_RS17345	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
ABI39_RS17365	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABI39_RS17370	COG1131	(ABC) transporter
ABI39_RS17375	COG0842	Transport permease protein
ABI39_RS17380	COG1129	ABC transporter
ABI39_RS17380	COG0842	Transport permease protein
ABI39_RS17385	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ABI39_RS17400	COG0540	Belongs to the ATCase OTCase family
ABI39_RS17405	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
ABI39_RS17420	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ABI39_RS17425	COG0534	Mate efflux family protein
ABI39_RS17430	COG2885	chlorophyll binding
ABI39_RS17435	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABI39_RS17470	COG0504	CTP synthase activity
ABI39_RS17475	COG0706	membrane insertase activity
ABI39_RS17480	COG1506	peptidase
ABI39_RS17480	COG0823	Involved in the tonB-independent uptake of proteins
ABI39_RS17485	COG0564	pseudouridine synthase activity
ABI39_RS17490	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ABI39_RS17495	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ABI39_RS17495	COG0574	Belongs to the PEP-utilizing enzyme family
ABI39_RS17500	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
ABI39_RS17515	COG1136	(ABC) transporter
ABI39_RS17515	COG0577	efflux transmembrane transporter activity
ABI39_RS17525	COG0339	signal peptide processing
ABI39_RS17545	COG0438	transferase activity, transferring glycosyl groups
ABI39_RS17560	COG1215	transferase activity, transferring glycosyl groups
ABI39_RS17575	COG1216	Glycosyl transferase, family 2
ABI39_RS17600	COG0386	Belongs to the glutathione peroxidase family
ABI39_RS17610	COG4191	Histidine kinase
ABI39_RS17625	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
ABI39_RS17630	COG0305	Participates in initiation and elongation during chromosome replication
ABI39_RS17635	COG0072	phenylalanine-tRNA ligase activity
ABI39_RS17635	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABI39_RS17640	COG0217	transcriptional regulatory protein
ABI39_RS17660	COG0577	efflux transmembrane transporter activity
ABI39_RS17665	COG0577	efflux transmembrane transporter activity
ABI39_RS17665	COG1136	(ABC) transporter
ABI39_RS17685	COG3852	Histidine kinase
ABI39_RS17690	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABI39_RS17690	COG3153	acetyltransferase
ABI39_RS17750	COG0352	thiamine-phosphate diphosphorylase activity
ABI39_RS17755	COG2022	thiamine diphosphate biosynthetic process
ABI39_RS17760	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
ABI39_RS17780	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ABI39_RS17785	COG0754	glutathionylspermidine amidase activity
ABI39_RS17795	COG0352	thiamine-phosphate diphosphorylase activity
ABI39_RS17800	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABI39_RS17810	COG1177	transmembrane transport
ABI39_RS17845	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABI39_RS17850	COG0058	SHG alpha-glucan phosphorylase activity
ABI39_RS17860	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ABI39_RS17865	COG1269	ATP hydrolysis coupled proton transport
ABI39_RS17880	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
ABI39_RS17930	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABI39_RS17960	COG2877	3-deoxy-8-phosphooctulonate synthase activity
ABI39_RS17965	COG1597	lipid kinase activity
ABI39_RS17970	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ABI39_RS17980	COG1970	mechanosensitive ion channel activity
ABI39_RS17985	COG0519	Catalyzes the synthesis of GMP from XMP
ABI39_RS17985	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABI39_RS17990	COG0519	Catalyzes the synthesis of GMP from XMP
ABI39_RS18005	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABI39_RS18040	COG3525	Glycosyl hydrolase, family 20, catalytic domain
ABI39_RS18055	COG3119	arylsulfatase activity
ABI39_RS18085	COG1629	transport
ABI39_RS18085	COG4206	TonB-dependent receptor
ABI39_RS18115	COG1595	DNA-templated transcription, initiation
ABI39_RS18120	COG1012	belongs to the aldehyde dehydrogenase family
ABI39_RS18160	COG2211	Major facilitator Superfamily
ABI39_RS18210	COG1408	metallophosphoesterase
ABI39_RS18215	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
ABI39_RS18230	COG1674	ftsk spoiiie
ABI39_RS18240	COG0492	ferredoxin-NADP+ reductase activity
ABI39_RS18245	COG0612	Peptidase, M16
ABI39_RS18255	COG1131	(ABC) transporter
ABI39_RS18260	COG0791	NLP P60 protein
ABI39_RS18265	COG0546	phosphoglycolate phosphatase activity
ABI39_RS18270	COG0261	This protein binds to 23S rRNA in the presence of protein L20
ABI39_RS18275	COG0211	Belongs to the bacterial ribosomal protein bL27 family
ABI39_RS18290	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
ABI39_RS18325	COG0037	tRNA processing
ABI39_RS18340	COG4864	UPF0365 protein
ABI39_RS18345	COG0813	purine-nucleoside phosphorylase activity
ABI39_RS18355	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
ABI39_RS18365	COG4974	Belongs to the 'phage' integrase family
ABI39_RS18435	COG0515	serine threonine protein kinase
ABI39_RS18475	COG3328	transposase activity
ABI39_RS18565	COG4942	peptidase
ABI39_RS18655	COG1063	alcohol dehydrogenase
ABI39_RS18670	COG1028	Short-chain dehydrogenase reductase Sdr
ABI39_RS18675	COG0346	lactoylglutathione lyase activity
ABI39_RS18705	COG0564	pseudouridine synthase activity
ABI39_RS18710	COG0534	Mate efflux family protein
ABI39_RS18730	COG1538	Outer membrane efflux protein
ABI39_RS18805	COG3279	Response regulator of the LytR AlgR family
ABI39_RS18810	COG3275	phosphorelay sensor kinase activity
ABI39_RS18825	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABI39_RS18835	COG0739	heme binding
ABI39_RS18840	COG0686	Belongs to the AlaDH PNT family
ABI39_RS18845	COG0805	protein transport
ABI39_RS18850	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ABI39_RS18870	COG2855	membrane
ABI39_RS18875	COG0583	DNA-binding transcription factor activity
ABI39_RS18885	COG0542	response to heat
ABI39_RS18910	COG1862	Preprotein translocase
ABI39_RS18915	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ABI39_RS18925	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
ABI39_RS18930	COG0193	aminoacyl-tRNA hydrolase activity
ABI39_RS18935	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
ABI39_RS18945	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABI39_RS18945	COG4651	solute:proton antiporter activity
ABI39_RS18950	COG0404	The glycine cleavage system catalyzes the degradation of glycine
ABI39_RS18955	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABI39_RS18960	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
ABI39_RS18965	COG4974	Belongs to the 'phage' integrase family
ABI39_RS19005	COG0210	DNA helicase
ABI39_RS19010	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
ABI39_RS19020	COG0745	RESPONSE REGULATOR receiver
ABI39_RS19020	COG3292	Two component regulator propeller
ABI39_RS19020	COG2205	protein histidine kinase activity
ABI39_RS19035	COG5146	pantothenate kinase activity
ABI39_RS19090	COG0656	L-ascorbic acid biosynthetic process
ABI39_RS19100	COG0656	L-ascorbic acid biosynthetic process
ABI39_RS19105	COG0656	L-ascorbic acid biosynthetic process
ABI39_RS19110	COG3250	beta-galactosidase activity
ABI39_RS19195	COG0805	protein transport
ABI39_RS19200	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ABI39_RS19235	COG2311	Membrane
ABI39_RS19240	COG0697	spore germination
ABI39_RS19255	COG0667	Aldo Keto reductase
ABI39_RS19260	COG1028	Short-chain dehydrogenase reductase Sdr
ABI39_RS19285	COG1028	Short-chain dehydrogenase reductase Sdr
ABI39_RS19290	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
ABI39_RS19295	COG0534	Mate efflux family protein
ABI39_RS19320	COG0656	L-ascorbic acid biosynthetic process
ABI39_RS19325	COG1917	Cupin 2, conserved barrel domain protein
ABI39_RS19325	COG4977	sequence-specific DNA binding
ABI39_RS19330	COG1028	Short-chain dehydrogenase reductase Sdr
ABI39_RS19340	COG0671	phosphoesterase, PA-phosphatase related
ABI39_RS19345	COG5002	protein histidine kinase activity
ABI39_RS19345	COG3850	Histidine kinase
ABI39_RS19350	COG0745	RESPONSE REGULATOR receiver
ABI39_RS19560	COG1690	Belongs to the RtcB family
ABI39_RS19885	COG0489	protein tyrosine kinase activity
ABI39_RS19895	COG4974	Belongs to the 'phage' integrase family
ABI39_RS19915	COG0788	formyltetrahydrofolate deformylase activity
ABI39_RS19925	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
ABI39_RS19930	COG0107	imidazoleglycerol-phosphate synthase activity
ABI39_RS19935	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ABI39_RS19935	COG0140	phosphoribosyl-ATP diphosphatase activity
ABI39_RS19940	COG2884	Cell division ATP-binding protein ftsE
ABI39_RS19945	COG0527	aspartate kinase activity
ABI39_RS19950	COG0019	diaminopimelate decarboxylase activity
ABI39_RS19975	COG2431	L-lysine efflux transmembrane transporter activity
ABI39_RS19985	COG0436	Aminotransferase
ABI39_RS20000	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ABI39_RS20005	COG0167	dihydroorotate dehydrogenase activity
ABI39_RS20055	COG1027	Aspartate ammonia-lyase
ABI39_RS20060	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
ABI39_RS20070	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABI39_RS20080	COG4657	Part of a membrane complex involved in electron transport
ABI39_RS20085	COG4660	Part of a membrane complex involved in electron transport
ABI39_RS20090	COG4659	FMN binding
ABI39_RS20095	COG4658	electron transport chain
ABI39_RS20100	COG4656	Part of a membrane complex involved in electron transport
ABI39_RS20115	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABI39_RS20120	COG0697	spore germination
ABI39_RS20130	COG0076	glutamate decarboxylase activity
ABI39_RS20135	COG2066	Belongs to the glutaminase family
ABI39_RS20140	COG3142	Participates in the control of copper homeostasis
ABI39_RS20160	COG0531	amino acid
ABI39_RS20165	COG5002	protein histidine kinase activity
ABI39_RS20170	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ABI39_RS20175	COG0481	GTPase activity
ABI39_RS20195	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ABI39_RS20200	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ABI39_RS20270	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
ABI39_RS20315	COG0297	glycogen (starch) synthase activity
ABI39_RS20315	COG0438	transferase activity, transferring glycosyl groups
ABI39_RS20320	COG0438	transferase activity, transferring glycosyl groups
ABI39_RS20365	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ABI39_RS20370	COG0581	inorganic phosphate transmembrane transporter activity
ABI39_RS20375	COG0573	inorganic phosphate transmembrane transporter activity
ABI39_RS20380	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ABI39_RS20385	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABI39_RS20400	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
ABI39_RS20405	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABI39_RS20410	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
ABI39_RS20445	COG2115	Belongs to the xylose isomerase family
ABI39_RS20460	COG0745	RESPONSE REGULATOR receiver
ABI39_RS20460	COG3292	Two component regulator propeller
ABI39_RS20460	COG2205	protein histidine kinase activity
ABI39_RS20465	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ABI39_RS20485	COG1215	transferase activity, transferring glycosyl groups
ABI39_RS20510	COG1216	Glycosyl transferase, family 2
ABI39_RS20515	COG1216	Glycosyl transferase, family 2
ABI39_RS20535	COG0438	transferase activity, transferring glycosyl groups
ABI39_RS20545	COG1215	transferase activity, transferring glycosyl groups
ABI39_RS20565	COG0438	transferase activity, transferring glycosyl groups
ABI39_RS20575	COG1216	Glycosyl transferase, family 2
ABI39_RS20575	COG1442	glycosyl transferase family 8
ABI39_RS20580	COG0438	transferase activity, transferring glycosyl groups
ABI39_RS20585	COG0463	Glycosyl transferase, family 2
ABI39_RS20590	COG0745	RESPONSE REGULATOR receiver
ABI39_RS20595	COG0784	Response regulator, receiver
ABI39_RS20595	COG2205	protein histidine kinase activity
ABI39_RS20610	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABI39_RS20615	COG0352	thiamine-phosphate diphosphorylase activity
ABI39_RS20615	COG0351	phosphomethylpyrimidine kinase
ABI39_RS20620	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ABI39_RS20630	COG0366	Alpha amylase catalytic
ABI39_RS20650	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ABI39_RS20655	COG0071	Belongs to the small heat shock protein (HSP20) family
ABI39_RS20670	COG0505	Belongs to the CarA family
ABI39_RS20680	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ABI39_RS20685	COG0069	glutamate synthase activity
ABI39_RS20685	COG0067	glutamate synthase
ABI39_RS20685	COG0070	glutamate synthase
ABI39_RS20695	COG0367	asparagine synthase
ABI39_RS20745	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABI39_RS20775	COG0110	maltose O-acetyltransferase activity
ABI39_RS20780	COG0438	transferase activity, transferring glycosyl groups
ABI39_RS20795	COG1216	Glycosyl transferase, family 2
ABI39_RS20800	COG0438	transferase activity, transferring glycosyl groups
ABI39_RS20840	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ABI39_RS20900	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ABI39_RS20910	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ABI39_RS20915	COG0291	Belongs to the bacterial ribosomal protein bL35 family
ABI39_RS20920	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ABI39_RS20925	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ABI39_RS20935	COG0242	peptide deformylase activity
ABI39_RS20940	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ABI39_RS20985	COG4946	Tricorn protease homolog
ABI39_RS20985	COG1506	peptidase
ABI39_RS20985	COG0823	Involved in the tonB-independent uptake of proteins
ABI39_RS20990	COG0477	Major facilitator Superfamily
ABI39_RS20990	COG2814	Major facilitator Superfamily
ABI39_RS21015	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABI39_RS21045	COG0133	tryptophan synthase activity
ABI39_RS21050	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ABI39_RS21055	COG0512	Glutamine amidotransferase of anthranilate synthase
ABI39_RS21060	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ABI39_RS21065	COG0134	indole-3-glycerol-phosphate synthase activity
ABI39_RS21070	COG0135	phosphoribosylanthranilate isomerase activity
ABI39_RS21075	COG0159	tryptophan synthase activity
ABI39_RS21080	COG0252	asparaginase activity
ABI39_RS21085	COG0745	RESPONSE REGULATOR receiver
ABI39_RS21090	COG5002	protein histidine kinase activity
ABI39_RS21105	COG0629	single-stranded DNA binding
ABI39_RS21115	COG0776	regulation of translation
ABI39_RS21120	COG1530	ribonuclease E activity
ABI39_RS21130	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABI39_RS21140	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
ABI39_RS21145	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
ABI39_RS21150	COG0166	Belongs to the GPI family
ABI39_RS21155	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABI39_RS21165	COG0702	epimerase
ABI39_RS21170	COG4771	TonB-dependent receptor
ABI39_RS21185	COG1940	carbohydrate kinase activity
ABI39_RS21200	COG2271	Major facilitator Superfamily
ABI39_RS21205	COG0363	glucosamine-6-phosphate deaminase activity
ABI39_RS21210	COG0363	glucosamine-6-phosphate deaminase activity
ABI39_RS21220	COG4977	sequence-specific DNA binding
ABI39_RS21220	COG1917	Cupin 2, conserved barrel domain protein
ABI39_RS21225	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABI39_RS21255	COG1131	(ABC) transporter
ABI39_RS21275	COG0745	RESPONSE REGULATOR receiver
ABI39_RS21285	COG3250	beta-galactosidase activity
ABI39_RS21295	COG3525	Glycosyl hydrolase, family 20, catalytic domain
ABI39_RS21305	COG3525	Glycosyl hydrolase, family 20, catalytic domain
ABI39_RS21325	COG3525	Glycosyl hydrolase, family 20, catalytic domain
ABI39_RS21340	COG1629	transport
ABI39_RS21340	COG4206	TonB-dependent receptor
ABI39_RS21350	COG2502	aspartate--ammonia ligase
ABI39_RS21355	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
ABI39_RS21370	COG3876	Protein conserved in bacteria
ABI39_RS21385	COG1132	(ABC) transporter
ABI39_RS21425	COG4804	nuclease activity
ABI39_RS21430	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
ABI39_RS21500	COG0860	N-Acetylmuramoyl-L-alanine amidase