locus-tag class description AE940_RS00030 PF00924 Mechanosensitive ion channel AE940_RS00030 PF05552 Conserved TM helix AE940_RS00045 PF01301 Glycosyl hydrolases family 35 AE940_RS00060 PF04616 Glycosyl hydrolases family 43 AE940_RS00060 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AE940_RS00070 PF00593 TonB dependent receptor AE940_RS00070 PF07715 TonB-dependent Receptor Plug Domain AE940_RS00090 PF16355 Domain of unknown function (DUF4982) AE940_RS00090 PF02837 Glycosyl hydrolases family 2, sugar binding domain AE940_RS00090 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AE940_RS00090 PF00703 Glycosyl hydrolases family 2 AE940_RS00090 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AE940_RS00095 PF16355 Domain of unknown function (DUF4982) AE940_RS00095 PF00703 Glycosyl hydrolases family 2 AE940_RS00095 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AE940_RS00095 PF02837 Glycosyl hydrolases family 2, sugar binding domain AE940_RS00095 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AE940_RS00105 PF02837 Glycosyl hydrolases family 2, sugar binding domain AE940_RS00105 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AE940_RS00105 PF16355 Domain of unknown function (DUF4982) AE940_RS00105 PF00703 Glycosyl hydrolases family 2 AE940_RS00115 PF00593 TonB dependent receptor AE940_RS00115 PF07715 TonB-dependent Receptor Plug Domain AE940_RS00160 PF07715 TonB-dependent Receptor Plug Domain AE940_RS00160 PF00593 TonB dependent receptor AE940_RS00165 PF12833 Helix-turn-helix domain AE940_RS00175 PF01594 AI-2E family transporter AE940_RS00180 PF00265 Thymidine kinase AE940_RS00190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AE940_RS00205 PF01914 MarC family integral membrane protein AE940_RS00215 PF07715 TonB-dependent Receptor Plug Domain AE940_RS00215 PF00593 TonB dependent receptor AE940_RS00220 PF02899 Phage integrase, N-terminal SAM-like domain AE940_RS00220 PF00589 Phage integrase family AE940_RS00225 PF07715 TonB-dependent Receptor Plug Domain AE940_RS00225 PF00593 TonB dependent receptor AE940_RS00235 PF07715 TonB-dependent Receptor Plug Domain AE940_RS00235 PF00593 TonB dependent receptor AE940_RS00245 PF07715 TonB-dependent Receptor Plug Domain AE940_RS00245 PF00593 TonB dependent receptor AE940_RS00250 PF14322 Starch-binding associating with outer membrane AE940_RS00250 PF07980 SusD family AE940_RS00255 PF01926 50S ribosome-binding GTPase AE940_RS00255 PF13167 GTP-binding GTPase N-terminal AE940_RS00255 PF16360 GTP-binding GTPase Middle Region AE940_RS00265 PF11838 ERAP1-like C-terminal domain AE940_RS00265 PF01433 Peptidase family M1 domain AE940_RS00270 PF05683 Fumarase C-terminus AE940_RS00270 PF05681 Fumarate hydratase (Fumerase) AE940_RS00285 PF13520 Amino acid permease AE940_RS00295 PF00873 AcrB/AcrD/AcrF family AE940_RS00300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AE940_RS00300 PF00529 HlyD membrane-fusion protein of T1SS AE940_RS00315 PF03193 RsgA GTPase AE940_RS00315 PF16745 RsgA N-terminal domain AE940_RS00320 PF01765 Ribosome recycling factor AE940_RS00340 PF00012 Hsp70 protein AE940_RS00355 PF00696 Amino acid kinase family AE940_RS00360 PF01554 MatE AE940_RS00395 PF02021 Uncharacterised protein family UPF0102 AE940_RS00405 PF14437 MafB19-like deaminase AE940_RS00415 PF01066 CDP-alcohol phosphatidyltransferase AE940_RS00420 PF02666 Phosphatidylserine decarboxylase AE940_RS00425 PF07733 Bacterial DNA polymerase III alpha NTPase domain AE940_RS00425 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AE940_RS00425 PF14579 Helix-hairpin-helix motif AE940_RS00425 PF02811 PHP domain AE940_RS00425 PF01336 OB-fold nucleic acid binding domain AE940_RS00430 PF00085 Thioredoxin AE940_RS00465 PF17863 AAA lid domain AE940_RS00465 PF07726 ATPase family associated with various cellular activities (AAA) AE940_RS00480 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AE940_RS00485 PF00950 ABC 3 transport family AE940_RS00495 PF04389 Peptidase family M28 AE940_RS00495 PF02225 PA domain AE940_RS00515 PF00593 TonB dependent receptor AE940_RS00515 PF07715 TonB-dependent Receptor Plug Domain AE940_RS00535 PF16353 Domain of unknown function(DUF4981) AE940_RS00535 PF00703 Glycosyl hydrolases family 2 AE940_RS00535 PF02837 Glycosyl hydrolases family 2, sugar binding domain AE940_RS00535 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AE940_RS00535 PF02929 Beta galactosidase small chain AE940_RS00540 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AE940_RS00550 PF09308 LuxQ, periplasmic AE940_RS00550 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS00550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS00550 PF00072 Response regulator receiver domain AE940_RS00555 PF03173 Putative carbohydrate binding domain AE940_RS00555 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain AE940_RS00555 PF00728 Glycosyl hydrolase family 20, catalytic domain AE940_RS00555 PF02838 Glycosyl hydrolase family 20, domain 2 AE940_RS00575 PF01761 3-dehydroquinate synthase AE940_RS00590 PF13396 Phospholipase_D-nuclease N-terminal AE940_RS00590 PF13091 PLD-like domain AE940_RS00620 PF00593 TonB dependent receptor AE940_RS00620 PF07715 TonB-dependent Receptor Plug Domain AE940_RS00630 PF17678 Glycosyl hydrolase family 92 N-terminal domain AE940_RS00630 PF07971 Glycosyl hydrolase family 92 AE940_RS00645 PF17678 Glycosyl hydrolase family 92 N-terminal domain AE940_RS00645 PF07971 Glycosyl hydrolase family 92 AE940_RS00650 PF07690 Major Facilitator Superfamily AE940_RS00660 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AE940_RS00660 PF01411 tRNA synthetases class II (A) AE940_RS00660 PF02272 DHHA1 domain AE940_RS00665 PF08525 Opacity-associated protein A N-terminal motif AE940_RS00665 PF01476 LysM domain AE940_RS00665 PF01551 Peptidase family M23 AE940_RS00675 PF04607 Region found in RelA / SpoT proteins AE940_RS00675 PF02824 TGS domain AE940_RS00675 PF13291 ACT domain AE940_RS00680 PF05257 CHAP domain AE940_RS00680 PF01476 LysM domain AE940_RS00690 PF02195 ParB-like nuclease domain AE940_RS00690 PF17762 HTH domain found in ParB protein AE940_RS00695 PF13614 AAA domain AE940_RS00700 PF01975 Survival protein SurE AE940_RS00705 PF02684 Lipid-A-disaccharide synthetase AE940_RS00720 PF17862 AAA+ lid domain AE940_RS00720 PF00004 ATPase family associated with various cellular activities (AAA) AE940_RS00720 PF01434 Peptidase family M41 AE940_RS00740 PF01769 Divalent cation transporter AE940_RS00740 PF03448 MgtE intracellular N domain AE940_RS00740 PF00571 CBS domain AE940_RS00745 PF00398 Ribosomal RNA adenine dimethylase AE940_RS00755 PF07687 Peptidase dimerisation domain AE940_RS00755 PF01546 Peptidase family M20/M25/M40 AE940_RS00810 PF00924 Mechanosensitive ion channel AE940_RS00815 PF07883 Cupin domain AE940_RS00815 PF12833 Helix-turn-helix domain AE940_RS00860 PF00483 Nucleotidyl transferase AE940_RS00865 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AE940_RS00865 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AE940_RS00870 PF01370 NAD dependent epimerase/dehydratase family AE940_RS00880 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AE940_RS00885 PF14667 Polysaccharide biosynthesis C-terminal domain AE940_RS00885 PF01943 Polysaccharide biosynthesis protein AE940_RS00895 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AE940_RS00905 PF00132 Bacterial transferase hexapeptide (six repeats) AE940_RS00905 PF12464 Maltose acetyltransferase AE940_RS00905 PF14602 Hexapeptide repeat of succinyl-transferase AE940_RS00915 PF01467 Cytidylyltransferase-like AE940_RS00930 PF04991 LicD family AE940_RS00940 PF13439 Glycosyltransferase Family 4 AE940_RS00940 PF00534 Glycosyl transferases group 1 AE940_RS00945 PF00534 Glycosyl transferases group 1 AE940_RS00945 PF13477 Glycosyl transferase 4-like AE940_RS00950 PF02397 Bacterial sugar transferase AE940_RS00970 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AE940_RS00970 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AE940_RS00975 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AE940_RS00985 PF09820 Predicted AAA-ATPase AE940_RS00985 PF08011 PD-(D/E)XK nuclease superfamily AE940_RS00990 PF00248 Aldo/keto reductase family AE940_RS00995 PF01915 Glycosyl hydrolase family 3 C-terminal domain AE940_RS00995 PF00933 Glycosyl hydrolase family 3 N terminal domain AE940_RS00995 PF14310 Fibronectin type III-like domain AE940_RS01000 PF00593 TonB dependent receptor AE940_RS01000 PF07715 TonB-dependent Receptor Plug Domain AE940_RS01005 PF14322 Starch-binding associating with outer membrane AE940_RS01005 PF07980 SusD family AE940_RS01025 PF02156 Glycosyl hydrolase family 26 AE940_RS01025 PF03425 Carbohydrate binding domain (family 11) AE940_RS01035 PF01915 Glycosyl hydrolase family 3 C-terminal domain AE940_RS01035 PF14310 Fibronectin type III-like domain AE940_RS01035 PF00933 Glycosyl hydrolase family 3 N terminal domain AE940_RS01045 PF02310 B12 binding domain AE940_RS01045 PF02607 B12 binding domain AE940_RS01060 PF02156 Glycosyl hydrolase family 26 AE940_RS01065 PF04041 beta-1,4-mannooligosaccharide phosphorylase AE940_RS01115 PF00989 PAS fold AE940_RS01115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS01115 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS01120 PF00361 Proton-conducting membrane transporter AE940_RS01125 PF00361 Proton-conducting membrane transporter AE940_RS01130 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AE940_RS01130 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AE940_RS01130 PF00361 Proton-conducting membrane transporter AE940_RS01135 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AE940_RS01140 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AE940_RS01145 PF12838 4Fe-4S dicluster domain AE940_RS01150 PF00146 NADH dehydrogenase AE940_RS01155 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AE940_RS01155 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AE940_RS01160 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AE940_RS01165 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AE940_RS01175 PF02386 Cation transport protein AE940_RS01180 PF02254 TrkA-N domain AE940_RS01180 PF02080 TrkA-C domain AE940_RS01185 PF02779 Transketolase, pyrimidine binding domain AE940_RS01185 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AE940_RS01185 PF02780 Transketolase, C-terminal domain AE940_RS01190 PF13026 Protein of unknown function (DUF3887) AE940_RS01190 PF12146 Serine aminopeptidase, S33 AE940_RS01200 PF13419 Haloacid dehalogenase-like hydrolase AE940_RS01205 PF00884 Sulfatase AE940_RS01220 PF00884 Sulfatase AE940_RS01230 PF07715 TonB-dependent Receptor Plug Domain AE940_RS01230 PF00593 TonB dependent receptor AE940_RS01235 PF07494 Two component regulator propeller AE940_RS01235 PF12833 Helix-turn-helix domain AE940_RS01235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS01235 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS01235 PF00072 Response regulator receiver domain AE940_RS01235 PF07495 Y_Y_Y domain AE940_RS01240 PF07690 Major Facilitator Superfamily AE940_RS01260 PF01757 Acyltransferase family AE940_RS01265 PF00902 Sec-independent protein translocase protein (TatC) AE940_RS01270 PF02416 mttA/Hcf106 family AE940_RS01275 PF01168 Alanine racemase, N-terminal domain AE940_RS01275 PF00842 Alanine racemase, C-terminal domain AE940_RS01300 PF07730 Histidine kinase AE940_RS01300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS01320 PF00132 Bacterial transferase hexapeptide (six repeats) AE940_RS01320 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AE940_RS01325 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AE940_RS01325 PF07977 FabA-like domain AE940_RS01330 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AE940_RS01330 PF00132 Bacterial transferase hexapeptide (six repeats) AE940_RS01335 PF01966 HD domain AE940_RS01340 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AE940_RS01345 PF03462 PCRF domain AE940_RS01345 PF00472 RF-1 domain AE940_RS01350 PF02769 AIR synthase related protein, C-terminal domain AE940_RS01350 PF00586 AIR synthase related protein, N-terminal domain AE940_RS01355 PF04011 LemA family AE940_RS01370 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AE940_RS01370 PF01488 Shikimate / quinate 5-dehydrogenase AE940_RS01370 PF08501 Shikimate dehydrogenase substrate binding domain AE940_RS01375 PF01209 ubiE/COQ5 methyltransferase family AE940_RS01380 PF01259 SAICAR synthetase AE940_RS01385 PF02562 PhoH-like protein AE940_RS01395 PF01145 SPFH domain / Band 7 family AE940_RS01395 PF15975 Flotillin AE940_RS01415 PF01416 tRNA pseudouridine synthase AE940_RS01430 PF01636 Phosphotransferase enzyme family AE940_RS01435 PF02929 Beta galactosidase small chain AE940_RS01435 PF00703 Glycosyl hydrolases family 2 AE940_RS01435 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AE940_RS01435 PF02837 Glycosyl hydrolases family 2, sugar binding domain AE940_RS01435 PF16353 Domain of unknown function(DUF4981) AE940_RS01440 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AE940_RS01440 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AE940_RS01445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AE940_RS01460 PF13181 Tetratricopeptide repeat AE940_RS01460 PF17128 Domain of unknown function (DUF5107) AE940_RS01465 PF00083 Sugar (and other) transporter AE940_RS01470 PF02311 AraC-like ligand binding domain AE940_RS01470 PF12833 Helix-turn-helix domain AE940_RS01475 PF07691 PA14 domain AE940_RS01475 PF01915 Glycosyl hydrolase family 3 C-terminal domain AE940_RS01475 PF00933 Glycosyl hydrolase family 3 N terminal domain AE940_RS01475 PF14310 Fibronectin type III-like domain AE940_RS01490 PF07980 SusD family AE940_RS01490 PF14322 Starch-binding associating with outer membrane AE940_RS01495 PF00593 TonB dependent receptor AE940_RS01495 PF07715 TonB-dependent Receptor Plug Domain AE940_RS01505 PF00593 TonB dependent receptor AE940_RS01505 PF07715 TonB-dependent Receptor Plug Domain AE940_RS01515 PF00593 TonB dependent receptor AE940_RS01515 PF07715 TonB-dependent Receptor Plug Domain AE940_RS01530 PF07715 TonB-dependent Receptor Plug Domain AE940_RS01530 PF00593 TonB dependent receptor AE940_RS01535 PF14322 Starch-binding associating with outer membrane AE940_RS01535 PF07980 SusD family AE940_RS01540 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AE940_RS01555 PF00885 6,7-dimethyl-8-ribityllumazine synthase AE940_RS01565 PF13476 AAA domain AE940_RS01580 PF01812 5-formyltetrahydrofolate cyclo-ligase family AE940_RS01585 PF13180 PDZ domain AE940_RS01585 PF03572 Peptidase family S41 AE940_RS01590 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AE940_RS01600 PF01432 Peptidase family M3 AE940_RS01605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AE940_RS01605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AE940_RS01610 PF01741 Large-conductance mechanosensitive channel, MscL AE940_RS01615 PF02540 NAD synthase AE940_RS01615 PF00958 GMP synthase C terminal domain AE940_RS01615 PF00117 Glutamine amidotransferase class-I AE940_RS01625 PF07715 TonB-dependent Receptor Plug Domain AE940_RS01625 PF00593 TonB dependent receptor AE940_RS01635 PF07715 TonB-dependent Receptor Plug Domain AE940_RS01635 PF00593 TonB dependent receptor AE940_RS01650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AE940_RS01660 PF04055 Radical SAM superfamily AE940_RS01665 PF00326 Prolyl oligopeptidase family AE940_RS01665 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AE940_RS01680 PF04055 Radical SAM superfamily AE940_RS01680 PF16199 Radical_SAM C-terminal domain AE940_RS01685 PF00258 Flavodoxin AE940_RS01685 PF00753 Metallo-beta-lactamase superfamily AE940_RS01685 PF00301 Rubredoxin AE940_RS01690 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AE940_RS01700 PF01300 Telomere recombination AE940_RS01710 PF05970 PIF1-like helicase AE940_RS01720 PF00155 Aminotransferase class I and II AE940_RS01725 PF01053 Cys/Met metabolism PLP-dependent enzyme AE940_RS01755 PF01694 Rhomboid family AE940_RS01765 PF00534 Glycosyl transferases group 1 AE940_RS01765 PF13439 Glycosyltransferase Family 4 AE940_RS01780 PF08323 Starch synthase catalytic domain AE940_RS01780 PF00534 Glycosyl transferases group 1 AE940_RS01785 PF02569 Pantoate-beta-alanine ligase AE940_RS01790 PF02261 Aspartate decarboxylase AE940_RS01795 PF00970 Oxidoreductase FAD-binding domain AE940_RS01795 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AE940_RS01795 PF00175 Oxidoreductase NAD-binding domain AE940_RS01800 PF07690 Major Facilitator Superfamily AE940_RS01805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AE940_RS01805 PF02403 Seryl-tRNA synthetase N-terminal domain AE940_RS01810 PF01016 Ribosomal L27 protein AE940_RS01815 PF00829 Ribosomal prokaryotic L21 protein AE940_RS01825 PF13419 Haloacid dehalogenase-like hydrolase AE940_RS01830 PF00877 NlpC/P60 family AE940_RS01835 PF00005 ABC transporter AE940_RS01845 PF00675 Insulinase (Peptidase family M16) AE940_RS01845 PF05193 Peptidase M16 inactive domain AE940_RS01850 PF00793 DAHP synthetase I family AE940_RS01855 PF00781 Diacylglycerol kinase catalytic domain AE940_RS01870 PF00005 ABC transporter AE940_RS01885 PF02577 Bifunctional nuclease AE940_RS01890 PF03825 Nucleoside H+ symporter AE940_RS01900 PF10672 S-adenosylmethionine-dependent methyltransferase AE940_RS01900 PF17785 PUA-like domain AE940_RS01915 PF01580 FtsK/SpoIIIE family AE940_RS01915 PF09397 Ftsk gamma domain AE940_RS01915 PF17854 FtsK alpha domain AE940_RS01915 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AE940_RS01925 PF07992 Pyridine nucleotide-disulphide oxidoreductase AE940_RS01930 PF02838 Glycosyl hydrolase family 20, domain 2 AE940_RS01930 PF00728 Glycosyl hydrolase family 20, catalytic domain AE940_RS01930 PF07691 PA14 domain AE940_RS01940 PF12437 Glutamine synthetase type III N terminal AE940_RS01940 PF18318 Glutamine synthetase C-terminal domain AE940_RS01940 PF00120 Glutamine synthetase, catalytic domain AE940_RS01950 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AE940_RS01955 PF00575 S1 RNA binding domain AE940_RS01960 PF12706 Beta-lactamase superfamily domain AE940_RS01965 PF08281 Sigma-70, region 4 AE940_RS01965 PF04542 Sigma-70 region 2 AE940_RS01980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AE940_RS01980 PF03819 MazG nucleotide pyrophosphohydrolase domain AE940_RS01990 PF08264 Anticodon-binding domain of tRNA AE940_RS01990 PF00133 tRNA synthetases class I (I, L, M and V) AE940_RS01990 PF10458 Valyl tRNA synthetase tRNA binding arm AE940_RS01995 PF00072 Response regulator receiver domain AE940_RS01995 PF01627 Hpt domain AE940_RS01995 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS01995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS02015 PF00593 TonB dependent receptor AE940_RS02015 PF07715 TonB-dependent Receptor Plug Domain AE940_RS02030 PF00149 Calcineurin-like phosphoesterase AE940_RS02045 PF07715 TonB-dependent Receptor Plug Domain AE940_RS02045 PF00593 TonB dependent receptor AE940_RS02050 PF14322 Starch-binding associating with outer membrane AE940_RS02050 PF07980 SusD family AE940_RS02055 PF00884 Sulfatase AE940_RS02055 PF16385 Domain of unknown function AE940_RS02060 PF16385 Domain of unknown function AE940_RS02060 PF00884 Sulfatase AE940_RS02075 PF07516 SecA Wing and Scaffold domain AE940_RS02075 PF01043 SecA preprotein cross-linking domain AE940_RS02075 PF07517 SecA DEAD-like domain AE940_RS02075 PF02810 SEC-C motif AE940_RS02080 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase AE940_RS02090 PF03309 Type III pantothenate kinase AE940_RS02110 PF00571 CBS domain AE940_RS02110 PF03471 Transporter associated domain AE940_RS02110 PF01595 Cyclin M transmembrane N-terminal domain AE940_RS02120 PF04055 Radical SAM superfamily AE940_RS02130 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AE940_RS02135 PF00158 Sigma-54 interaction domain AE940_RS02135 PF06490 Flagellar regulatory protein FleQ AE940_RS02135 PF02954 Bacterial regulatory protein, Fis family AE940_RS02160 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AE940_RS02170 PF01256 Carbohydrate kinase AE940_RS02180 PF13847 Methyltransferase domain AE940_RS02195 PF00266 Aminotransferase class-V AE940_RS02200 PF01467 Cytidylyltransferase-like AE940_RS02205 PF02719 Polysaccharide biosynthesis protein AE940_RS02210 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AE940_RS02215 PF02348 Cytidylyltransferase AE940_RS02220 PF02348 Cytidylyltransferase AE940_RS02230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AE940_RS02230 PF18603 L-amino acid ligase C-terminal domain 2 AE940_RS02235 PF03102 NeuB family AE940_RS02235 PF08666 SAF domain AE940_RS02250 PF04991 LicD family AE940_RS02255 PF13439 Glycosyltransferase Family 4 AE940_RS02255 PF00534 Glycosyl transferases group 1 AE940_RS02270 PF00535 Glycosyl transferase family 2 AE940_RS02275 PF01370 NAD dependent epimerase/dehydratase family AE940_RS02280 PF00953 Glycosyl transferase family 4 AE940_RS02295 PF00593 TonB dependent receptor AE940_RS02295 PF07715 TonB-dependent Receptor Plug Domain AE940_RS02300 PF00156 Phosphoribosyl transferase domain AE940_RS02310 PF01018 GTP1/OBG AE940_RS02310 PF01926 50S ribosome-binding GTPase AE940_RS02315 PF02578 Multi-copper polyphenol oxidoreductase laccase AE940_RS02335 PF10282 Lactonase, 7-bladed beta-propeller AE940_RS02355 PF11798 IMS family HHH motif AE940_RS02355 PF00817 impB/mucB/samB family AE940_RS02355 PF11799 impB/mucB/samB family C-terminal domain AE940_RS02370 PF03606 C4-dicarboxylate anaerobic carrier AE940_RS02385 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AE940_RS02390 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AE940_RS02390 PF08501 Shikimate dehydrogenase substrate binding domain AE940_RS02390 PF01488 Shikimate / quinate 5-dehydrogenase AE940_RS02395 PF12833 Helix-turn-helix domain AE940_RS02410 PF00849 RNA pseudouridylate synthase AE940_RS02415 PF04851 Type III restriction enzyme, res subunit AE940_RS02415 PF08774 VRR-NUC domain AE940_RS02420 PF01555 DNA methylase AE940_RS02420 PF18273 Type III R-M EcoP15I C-terminal domain AE940_RS02425 PF13802 Galactose mutarotase-like AE940_RS02425 PF01055 Glycosyl hydrolases family 31 AE940_RS02485 PF02384 N-6 DNA Methylase AE940_RS02485 PF12161 HsdM N-terminal domain AE940_RS02495 PF11867 Domain of unknown function (DUF3387) AE940_RS02495 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AE940_RS02495 PF18766 SWI2/SNF2 ATPase AE940_RS02570 PF02463 RecF/RecN/SMC N terminal domain AE940_RS02575 PF00580 UvrD/REP helicase N-terminal domain AE940_RS02575 PF13361 UvrD-like helicase C-terminal domain AE940_RS02590 PF10396 GTP-binding protein TrmE N-terminus AE940_RS02590 PF12631 MnmE helical domain AE940_RS02590 PF01926 50S ribosome-binding GTPase AE940_RS02595 PF00072 Response regulator receiver domain AE940_RS02595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS02595 PF09456 RcsC Alpha-Beta-Loop (ABL) AE940_RS02595 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS02605 PF02811 PHP domain AE940_RS02605 PF14579 Helix-hairpin-helix motif AE940_RS02605 PF00929 Exonuclease AE940_RS02605 PF07733 Bacterial DNA polymerase III alpha NTPase domain AE940_RS02605 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AE940_RS02610 PF01048 Phosphorylase superfamily AE940_RS02615 PF12127 SigmaW regulon antibacterial AE940_RS02630 PF01171 PP-loop family AE940_RS02640 PF02424 ApbE family AE940_RS02645 PF02659 Putative manganese efflux pump AE940_RS02660 PF00535 Glycosyl transferase family 2 AE940_RS02675 PF03952 Enolase, N-terminal domain AE940_RS02675 PF00113 Enolase, C-terminal TIM barrel domain AE940_RS02685 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AE940_RS02690 PF10566 Glycoside hydrolase 97 AE940_RS02690 PF14508 Glycosyl-hydrolase 97 N-terminal AE940_RS02690 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AE940_RS02710 PF01479 S4 domain AE940_RS02715 PF01195 Peptidyl-tRNA hydrolase AE940_RS02720 PF01386 Ribosomal L25p family AE940_RS02720 PF14693 Ribosomal protein TL5, C-terminal domain AE940_RS02730 PF01029 NusB family AE940_RS02735 PF02699 Preprotein translocase subunit AE940_RS02745 PF01121 Dephospho-CoA kinase AE940_RS02760 PF10431 C-terminal, D2-small domain, of ClpB protein AE940_RS02760 PF02861 Clp amino terminal domain, pathogenicity island component AE940_RS02760 PF17871 AAA lid domain AE940_RS02760 PF07724 AAA domain (Cdc48 subfamily) AE940_RS02760 PF00004 ATPase family associated with various cellular activities (AAA) AE940_RS02770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AE940_RS02770 PF03466 LysR substrate binding domain AE940_RS02775 PF03601 Conserved hypothetical protein 698 AE940_RS02790 PF08281 Sigma-70, region 4 AE940_RS02790 PF12680 SnoaL-like domain AE940_RS02790 PF04542 Sigma-70 region 2 AE940_RS02800 PF00154 recA bacterial DNA recombination protein AE940_RS02805 PF00578 AhpC/TSA family AE940_RS02810 PF03435 Saccharopine dehydrogenase NADP binding domain AE940_RS02810 PF16653 Saccharopine dehydrogenase C-terminal domain AE940_RS02825 PF01032 FecCD transport family AE940_RS02845 PF00012 Hsp70 protein AE940_RS02850 PF00654 Voltage gated chloride channel AE940_RS02855 PF01261 Xylose isomerase-like TIM barrel AE940_RS02860 PF00291 Pyridoxal-phosphate dependent enzyme AE940_RS02865 PF02386 Cation transport protein AE940_RS02875 PF00199 Catalase AE940_RS02875 PF06628 Catalase-related immune-responsive AE940_RS02880 PF17137 Domain of unknown function (DUF5110) AE940_RS02880 PF16338 Domain of unknown function (DUF4968) AE940_RS02880 PF01055 Glycosyl hydrolases family 31 AE940_RS02890 PF04616 Glycosyl hydrolases family 43 AE940_RS02905 PF07715 TonB-dependent Receptor Plug Domain AE940_RS02905 PF00593 TonB dependent receptor AE940_RS02915 PF10518 TAT (twin-arginine translocation) pathway signal sequence AE940_RS02915 PF00149 Calcineurin-like phosphoesterase AE940_RS02920 PF00884 Sulfatase AE940_RS02930 PF13192 Thioredoxin domain AE940_RS02930 PF07992 Pyridine nucleotide-disulphide oxidoreductase AE940_RS02935 PF00578 AhpC/TSA family AE940_RS02935 PF10417 C-terminal domain of 1-Cys peroxiredoxin AE940_RS02960 PF03315 Serine dehydratase beta chain AE940_RS02960 PF03313 Serine dehydratase alpha chain AE940_RS02965 PF01544 CorA-like Mg2+ transporter protein AE940_RS02970 PF00488 MutS domain V AE940_RS02970 PF01713 Smr domain AE940_RS02995 PF08240 Alcohol dehydrogenase GroES-like domain AE940_RS02995 PF00107 Zinc-binding dehydrogenase AE940_RS02995 PF13823 Alcohol dehydrogenase GroES-associated AE940_RS03000 PF00588 SpoU rRNA Methylase family AE940_RS03010 PF00884 Sulfatase AE940_RS03015 PF18698 Histidine kinase sensor domain AE940_RS03015 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS03015 PF00989 PAS fold AE940_RS03015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS03015 PF00672 HAMP domain AE940_RS03020 PF03601 Conserved hypothetical protein 698 AE940_RS03025 PF00403 Heavy-metal-associated domain AE940_RS03035 PF00691 OmpA family AE940_RS03040 PF04343 Protein of unknown function, DUF488 AE940_RS03045 PF00156 Phosphoribosyl transferase domain AE940_RS03050 PF01546 Peptidase family M20/M25/M40 AE940_RS03050 PF07687 Peptidase dimerisation domain AE940_RS03055 PF01571 Aminomethyltransferase folate-binding domain AE940_RS03055 PF08669 Glycine cleavage T-protein C-terminal barrel domain AE940_RS03075 PF02254 TrkA-N domain AE940_RS03075 PF00999 Sodium/hydrogen exchanger family AE940_RS03080 PF01810 LysE type translocator AE940_RS03090 PF04321 RmlD substrate binding domain AE940_RS03095 PF00009 Elongation factor Tu GTP binding domain AE940_RS03095 PF16658 Class II release factor RF3, C-terminal domain AE940_RS03095 PF03144 Elongation factor Tu domain 2 AE940_RS03105 PF00425 chorismate binding enzyme AE940_RS03110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AE940_RS03110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AE940_RS03120 PF00378 Enoyl-CoA hydratase/isomerase AE940_RS03125 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AE940_RS03125 PF13378 Enolase C-terminal domain-like AE940_RS03140 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AE940_RS03140 PF10566 Glycoside hydrolase 97 AE940_RS03140 PF14508 Glycosyl-hydrolase 97 N-terminal AE940_RS03155 PF00593 TonB dependent receptor AE940_RS03155 PF07715 TonB-dependent Receptor Plug Domain AE940_RS03185 PF04041 beta-1,4-mannooligosaccharide phosphorylase AE940_RS03190 PF00210 Ferritin-like domain AE940_RS03195 PF03466 LysR substrate binding domain AE940_RS03195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AE940_RS03215 PF04055 Radical SAM superfamily AE940_RS03220 PF02901 Pyruvate formate lyase-like AE940_RS03220 PF01228 Glycine radical AE940_RS03255 PF00571 CBS domain AE940_RS03255 PF03471 Transporter associated domain AE940_RS03255 PF01595 Cyclin M transmembrane N-terminal domain AE940_RS03260 PF01435 Peptidase family M48 AE940_RS03285 PF01053 Cys/Met metabolism PLP-dependent enzyme AE940_RS03295 PF00072 Response regulator receiver domain AE940_RS03295 PF00196 Bacterial regulatory proteins, luxR family AE940_RS03305 PF03553 Na+/H+ antiporter family AE940_RS03320 PF07690 Major Facilitator Superfamily AE940_RS03325 PF00905 Penicillin binding protein transpeptidase domain AE940_RS03325 PF00912 Transglycosylase AE940_RS03325 PF06832 Penicillin-Binding Protein C-terminus Family AE940_RS03330 PF07678 A-macroglobulin TED domain AE940_RS03330 PF01835 MG2 domain AE940_RS03330 PF17962 Bacterial macroglobulin domain 6 AE940_RS03330 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AE940_RS03330 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AE940_RS03330 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AE940_RS03330 PF00207 Alpha-2-macroglobulin family AE940_RS03330 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AE940_RS03330 PF07703 Alpha-2-macroglobulin bait region domain AE940_RS03335 PF01171 PP-loop family AE940_RS03340 PF02421 Ferrous iron transport protein B AE940_RS03340 PF07670 Nucleoside recognition AE940_RS03340 PF04023 FeoA domain AE940_RS03340 PF17910 FeoB cytosolic helical domain AE940_RS03340 PF07664 Ferrous iron transport protein B C terminus AE940_RS03400 PF02719 Polysaccharide biosynthesis protein AE940_RS03405 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AE940_RS03415 PF00550 Phosphopantetheine attachment site AE940_RS03415 PF13193 AMP-binding enzyme C-terminal domain AE940_RS03415 PF00668 Condensation domain AE940_RS03415 PF00975 Thioesterase domain AE940_RS03415 PF00501 AMP-binding enzyme AE940_RS03430 PF00483 Nucleotidyl transferase AE940_RS03440 PF00132 Bacterial transferase hexapeptide (six repeats) AE940_RS03460 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AE940_RS03460 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AE940_RS03460 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AE940_RS03465 PF00535 Glycosyl transferase family 2 AE940_RS03470 PF00535 Glycosyl transferase family 2 AE940_RS03475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AE940_RS03480 PF02397 Bacterial sugar transferase AE940_RS03490 PF00578 AhpC/TSA family AE940_RS03495 PF02080 TrkA-C domain AE940_RS03495 PF03600 Citrate transporter AE940_RS03510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AE940_RS03525 PF01243 Pyridoxamine 5'-phosphate oxidase AE940_RS03525 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AE940_RS03530 PF02678 Pirin AE940_RS03530 PF17954 Quercetinase C-terminal cupin domain AE940_RS03550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AE940_RS03550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AE940_RS03570 PF04542 Sigma-70 region 2 AE940_RS03570 PF08281 Sigma-70, region 4 AE940_RS03580 PF06508 Queuosine biosynthesis protein QueC AE940_RS03585 PF14489 QueF-like protein AE940_RS03590 PF02590 Predicted SPOUT methyltransferase AE940_RS03600 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AE940_RS03600 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AE940_RS03605 PF08281 Sigma-70, region 4 AE940_RS03605 PF04542 Sigma-70 region 2 AE940_RS03625 PF03060 Nitronate monooxygenase AE940_RS03630 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AE940_RS03630 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AE940_RS03640 PF03577 Peptidase family C69 AE940_RS03645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AE940_RS03645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AE940_RS03645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AE940_RS03645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AE940_RS03660 PF07715 TonB-dependent Receptor Plug Domain AE940_RS03660 PF00593 TonB dependent receptor AE940_RS03675 PF17801 Alpha galactosidase C-terminal beta sandwich domain AE940_RS03675 PF16499 Alpha galactosidase A AE940_RS03680 PF02329 Histidine carboxylase PI chain AE940_RS03685 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AE940_RS03685 PF00293 NUDIX domain AE940_RS03685 PF09297 NADH pyrophosphatase zinc ribbon domain AE940_RS03690 PF12848 ABC transporter AE940_RS03690 PF00005 ABC transporter AE940_RS03695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AE940_RS03695 PF07992 Pyridine nucleotide-disulphide oxidoreductase AE940_RS03700 PF04224 Protein of unknown function, DUF417 AE940_RS03705 PF02311 AraC-like ligand binding domain AE940_RS03705 PF12833 Helix-turn-helix domain AE940_RS03710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AE940_RS03715 PF01476 LysM domain AE940_RS03715 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AE940_RS03730 PF02687 FtsX-like permease family AE940_RS03730 PF12704 MacB-like periplasmic core domain AE940_RS03735 PF12704 MacB-like periplasmic core domain AE940_RS03735 PF02687 FtsX-like permease family AE940_RS03740 PF02687 FtsX-like permease family AE940_RS03740 PF12704 MacB-like periplasmic core domain AE940_RS03750 PF02687 FtsX-like permease family AE940_RS03750 PF12704 MacB-like periplasmic core domain AE940_RS03750 PF00005 ABC transporter AE940_RS03760 PF12833 Helix-turn-helix domain AE940_RS03765 PF00005 ABC transporter AE940_RS03770 PF12704 MacB-like periplasmic core domain AE940_RS03770 PF00005 ABC transporter AE940_RS03770 PF02687 FtsX-like permease family AE940_RS03780 PF00005 ABC transporter AE940_RS03800 PF09308 LuxQ, periplasmic AE940_RS03800 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS03800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS03800 PF00072 Response regulator receiver domain AE940_RS03810 PF00158 Sigma-54 interaction domain AE940_RS03810 PF00072 Response regulator receiver domain AE940_RS03810 PF02954 Bacterial regulatory protein, Fis family AE940_RS03815 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS03815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS03820 PF00155 Aminotransferase class I and II AE940_RS03825 PF06826 Predicted Permease Membrane Region AE940_RS03845 PF04851 Type III restriction enzyme, res subunit AE940_RS03845 PF00271 Helicase conserved C-terminal domain AE940_RS03845 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AE940_RS03845 PF08463 EcoEI R protein C-terminal AE940_RS03850 PF12161 HsdM N-terminal domain AE940_RS03850 PF02384 N-6 DNA Methylase AE940_RS03865 PF01420 Type I restriction modification DNA specificity domain AE940_RS03870 PF01420 Type I restriction modification DNA specificity domain AE940_RS03875 PF00589 Phage integrase family AE940_RS03875 PF02899 Phage integrase, N-terminal SAM-like domain AE940_RS03920 PF00483 Nucleotidyl transferase AE940_RS03925 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AE940_RS03935 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AE940_RS03935 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AE940_RS03935 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AE940_RS03940 PF01370 NAD dependent epimerase/dehydratase family AE940_RS03945 PF01943 Polysaccharide biosynthesis protein AE940_RS03955 PF00535 Glycosyl transferase family 2 AE940_RS03955 PF01501 Glycosyl transferase family 8 AE940_RS03970 PF00535 Glycosyl transferase family 2 AE940_RS03980 PF00535 Glycosyl transferase family 2 AE940_RS03990 PF01370 NAD dependent epimerase/dehydratase family AE940_RS03995 PF00953 Glycosyl transferase family 4 AE940_RS04000 PF00575 S1 RNA binding domain AE940_RS04000 PF10150 Ribonuclease E/G family AE940_RS04005 PF00216 Bacterial DNA-binding protein AE940_RS04010 PF14815 NUDIX domain AE940_RS04010 PF00730 HhH-GPD superfamily base excision DNA repair protein AE940_RS04010 PF00633 Helix-hairpin-helix motif AE940_RS04015 PF00884 Sulfatase AE940_RS04015 PF16385 Domain of unknown function AE940_RS04020 PF00436 Single-strand binding protein family AE940_RS04025 PF03471 Transporter associated domain AE940_RS04025 PF00571 CBS domain AE940_RS04080 PF00593 TonB dependent receptor AE940_RS04080 PF07715 TonB-dependent Receptor Plug Domain AE940_RS04095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS04095 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS04095 PF16736 Single Cache-like AE940_RS04095 PF00989 PAS fold AE940_RS04100 PF00486 Transcriptional regulatory protein, C terminal AE940_RS04100 PF00072 Response regulator receiver domain AE940_RS04125 PF16326 ABC transporter C-terminal domain AE940_RS04125 PF00005 ABC transporter AE940_RS04125 PF12848 ABC transporter AE940_RS04135 PF00722 Glycosyl hydrolases family 16 AE940_RS04135 PF02018 Carbohydrate binding domain AE940_RS04140 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain AE940_RS04140 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain AE940_RS04140 PF02278 Polysaccharide lyase family 8, super-sandwich domain AE940_RS04150 PF00155 Aminotransferase class I and II AE940_RS04155 PF12704 MacB-like periplasmic core domain AE940_RS04155 PF02687 FtsX-like permease family AE940_RS04160 PF00535 Glycosyl transferase family 2 AE940_RS04165 PF01594 AI-2E family transporter AE940_RS04170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS04170 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS04175 PF00158 Sigma-54 interaction domain AE940_RS04175 PF02954 Bacterial regulatory protein, Fis family AE940_RS04175 PF00072 Response regulator receiver domain AE940_RS04185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AE940_RS04185 PF00529 HlyD membrane-fusion protein of T1SS AE940_RS04190 PF12704 MacB-like periplasmic core domain AE940_RS04190 PF02687 FtsX-like permease family AE940_RS04190 PF00005 ABC transporter AE940_RS04195 PF12704 MacB-like periplasmic core domain AE940_RS04195 PF02687 FtsX-like permease family AE940_RS04200 PF07992 Pyridine nucleotide-disulphide oxidoreductase AE940_RS04210 PF04301 Protein of unknown function (DUF452) AE940_RS04210 PF08241 Methyltransferase domain AE940_RS04215 PF00155 Aminotransferase class I and II AE940_RS04220 PF04055 Radical SAM superfamily AE940_RS04220 PF06968 Biotin and Thiamin Synthesis associated domain AE940_RS04220 PF00202 Aminotransferase class-III AE940_RS04230 PF00593 TonB dependent receptor AE940_RS04230 PF07715 TonB-dependent Receptor Plug Domain AE940_RS04240 PF02652 L-lactate permease AE940_RS04245 PF05736 OprF membrane domain AE940_RS04245 PF00691 OmpA family AE940_RS04255 PF01039 Carboxyl transferase domain AE940_RS04260 PF02785 Biotin carboxylase C-terminal domain AE940_RS04260 PF00289 Biotin carboxylase, N-terminal domain AE940_RS04260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AE940_RS04265 PF00364 Biotin-requiring enzyme AE940_RS04270 PF01979 Amidohydrolase family AE940_RS04290 PF07992 Pyridine nucleotide-disulphide oxidoreductase AE940_RS04290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AE940_RS04295 PF03099 Biotin/lipoate A/B protein ligase family AE940_RS04295 PF10437 Bacterial lipoate protein ligase C-terminus AE940_RS04300 PF02817 e3 binding domain AE940_RS04300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AE940_RS04300 PF00364 Biotin-requiring enzyme AE940_RS04305 PF02779 Transketolase, pyrimidine binding domain AE940_RS04305 PF02780 Transketolase, C-terminal domain AE940_RS04310 PF00258 Flavodoxin AE940_RS04350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AE940_RS04370 PF04542 Sigma-70 region 2 AE940_RS04370 PF08281 Sigma-70, region 4 AE940_RS04370 PF12680 SnoaL-like domain AE940_RS04375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AE940_RS04375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AE940_RS04380 PF00497 Bacterial extracellular solute-binding proteins, family 3 AE940_RS04380 PF01464 Transglycosylase SLT domain AE940_RS04415 PF02502 Ribose/Galactose Isomerase AE940_RS04420 PF02779 Transketolase, pyrimidine binding domain AE940_RS04420 PF00456 Transketolase, thiamine diphosphate binding domain AE940_RS04420 PF02780 Transketolase, C-terminal domain AE940_RS04425 PF08544 GHMP kinases C terminal AE940_RS04425 PF10509 Galactokinase galactose-binding signature AE940_RS04425 PF00288 GHMP kinases N terminal domain AE940_RS04435 PF01263 Aldose 1-epimerase AE940_RS04440 PF01238 Phosphomannose isomerase type I AE940_RS04460 PF00271 Helicase conserved C-terminal domain AE940_RS04460 PF00270 DEAD/DEAH box helicase AE940_RS04465 PF00106 short chain dehydrogenase AE940_RS04480 PF02837 Glycosyl hydrolases family 2, sugar binding domain AE940_RS04480 PF16355 Domain of unknown function (DUF4982) AE940_RS04480 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AE940_RS04480 PF00703 Glycosyl hydrolases family 2 AE940_RS04480 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AE940_RS04485 PF00459 Inositol monophosphatase family AE940_RS04490 PF03600 Citrate transporter AE940_RS04490 PF02080 TrkA-C domain AE940_RS04500 PF01507 Phosphoadenosine phosphosulfate reductase family AE940_RS04505 PF00009 Elongation factor Tu GTP binding domain AE940_RS04545 PF00589 Phage integrase family AE940_RS04545 PF02899 Phage integrase, N-terminal SAM-like domain AE940_RS04570 PF03652 Holliday junction resolvase AE940_RS04575 PF01327 Polypeptide deformylase AE940_RS04590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AE940_RS04590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AE940_RS04590 PF03129 Anticodon binding domain AE940_RS04590 PF02824 TGS domain AE940_RS04595 PF05198 Translation initiation factor IF-3, N-terminal domain AE940_RS04595 PF00707 Translation initiation factor IF-3, C-terminal domain AE940_RS04600 PF01632 Ribosomal protein L35 AE940_RS04605 PF00453 Ribosomal protein L20 AE940_RS04620 PF00501 AMP-binding enzyme AE940_RS04620 PF14535 AMP-binding enzyme C-terminal domain AE940_RS04635 PF02618 YceG-like family AE940_RS04655 PF02719 Polysaccharide biosynthesis protein AE940_RS04680 PF00480 ROK family AE940_RS04680 PF01325 Iron dependent repressor, N-terminal DNA binding domain AE940_RS04685 PF00701 Dihydrodipicolinate synthetase family AE940_RS04695 PF07690 Major Facilitator Superfamily AE940_RS04700 PF04074 YhcH/YjgK/YiaL AE940_RS04705 PF07715 TonB-dependent Receptor Plug Domain AE940_RS04705 PF00593 TonB dependent receptor AE940_RS04710 PF07980 SusD family AE940_RS04710 PF14322 Starch-binding associating with outer membrane AE940_RS04725 PF00593 TonB dependent receptor AE940_RS04725 PF07715 TonB-dependent Receptor Plug Domain AE940_RS04730 PF14322 Starch-binding associating with outer membrane AE940_RS04730 PF07980 SusD family AE940_RS04745 PF07715 TonB-dependent Receptor Plug Domain AE940_RS04745 PF00593 TonB dependent receptor AE940_RS04750 PF14322 Starch-binding associating with outer membrane AE940_RS04750 PF07980 SusD family AE940_RS04755 PF14322 Starch-binding associating with outer membrane AE940_RS04755 PF07980 SusD family AE940_RS04760 PF07715 TonB-dependent Receptor Plug Domain AE940_RS04760 PF00593 TonB dependent receptor AE940_RS04765 PF00593 TonB dependent receptor AE940_RS04765 PF07715 TonB-dependent Receptor Plug Domain AE940_RS04775 PF13859 BNR repeat-like domain AE940_RS04775 PF14873 N-terminal domain of BNR-repeat neuraminidase AE940_RS04780 PF02838 Glycosyl hydrolase family 20, domain 2 AE940_RS04780 PF07691 PA14 domain AE940_RS04780 PF00728 Glycosyl hydrolase family 20, catalytic domain AE940_RS04800 PF02838 Glycosyl hydrolase family 20, domain 2 AE940_RS04800 PF07691 PA14 domain AE940_RS04800 PF00728 Glycosyl hydrolase family 20, catalytic domain AE940_RS04810 PF07691 PA14 domain AE940_RS04810 PF00728 Glycosyl hydrolase family 20, catalytic domain AE940_RS04810 PF02838 Glycosyl hydrolase family 20, domain 2 AE940_RS04815 PF07971 Glycosyl hydrolase family 92 AE940_RS04815 PF17678 Glycosyl hydrolase family 92 N-terminal domain AE940_RS04820 PF02837 Glycosyl hydrolases family 2, sugar binding domain AE940_RS04820 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AE940_RS04820 PF16355 Domain of unknown function (DUF4982) AE940_RS04820 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AE940_RS04820 PF00703 Glycosyl hydrolases family 2 AE940_RS04825 PF07715 TonB-dependent Receptor Plug Domain AE940_RS04825 PF00593 TonB dependent receptor AE940_RS04830 PF14322 Starch-binding associating with outer membrane AE940_RS04830 PF07980 SusD family AE940_RS04835 PF02837 Glycosyl hydrolases family 2, sugar binding domain AE940_RS04835 PF00703 Glycosyl hydrolases family 2 AE940_RS04835 PF02929 Beta galactosidase small chain AE940_RS04835 PF16353 Domain of unknown function(DUF4981) AE940_RS04835 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AE940_RS04840 PF01556 DnaJ C terminal domain AE940_RS04840 PF00684 DnaJ central domain AE940_RS04840 PF00226 DnaJ domain AE940_RS04845 PF01025 GrpE AE940_RS04850 PF00005 ABC transporter AE940_RS04850 PF12848 ABC transporter AE940_RS04855 PF04542 Sigma-70 region 2 AE940_RS04855 PF08281 Sigma-70, region 4 AE940_RS04950 PF00239 Resolvase, N terminal domain AE940_RS04950 PF02796 Helix-turn-helix domain of resolvase AE940_RS04970 PF00691 OmpA family AE940_RS05085 PF09371 Tex-like protein N-terminal domain AE940_RS05085 PF16921 Tex protein YqgF-like domain AE940_RS05085 PF00575 S1 RNA binding domain AE940_RS05085 PF17674 HHH domain AE940_RS05090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS05090 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS05095 PF00149 Calcineurin-like phosphoesterase AE940_RS05095 PF02872 5'-nucleotidase, C-terminal domain AE940_RS05100 PF13185 GAF domain AE940_RS05110 PF00593 TonB dependent receptor AE940_RS05110 PF07715 TonB-dependent Receptor Plug Domain AE940_RS05325 PF01555 DNA methylase AE940_RS05375 PF01554 MatE AE940_RS05385 PF01554 MatE AE940_RS05390 PF06826 Predicted Permease Membrane Region AE940_RS05390 PF02080 TrkA-C domain AE940_RS05395 PF06874 Firmicute fructose-1,6-bisphosphatase AE940_RS05405 PF00501 AMP-binding enzyme AE940_RS05405 PF13193 AMP-binding enzyme C-terminal domain AE940_RS05410 PF01370 NAD dependent epimerase/dehydratase family AE940_RS05415 PF16363 GDP-mannose 4,6 dehydratase AE940_RS05455 PF12804 MobA-like NTP transferase domain AE940_RS05470 PF00266 Aminotransferase class-V AE940_RS05475 PF04991 LicD family AE940_RS05495 PF01943 Polysaccharide biosynthesis protein AE940_RS05495 PF14667 Polysaccharide biosynthesis C-terminal domain AE940_RS05515 PF13579 Glycosyl transferase 4-like domain AE940_RS05515 PF00534 Glycosyl transferases group 1 AE940_RS05520 PF00535 Glycosyl transferase family 2 AE940_RS05525 PF01370 NAD dependent epimerase/dehydratase family AE940_RS05530 PF00953 Glycosyl transferase family 4 AE940_RS05550 PF00375 Sodium:dicarboxylate symporter family AE940_RS05555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AE940_RS05555 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AE940_RS05560 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AE940_RS05560 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AE940_RS05565 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AE940_RS05580 PF02018 Carbohydrate binding domain AE940_RS05580 PF06452 Carbohydrate family 9 binding domain-like AE940_RS05580 PF00395 S-layer homology domain AE940_RS05580 PF00331 Glycosyl hydrolase family 10 AE940_RS05585 PF03253 Urea transporter AE940_RS05600 PF11799 impB/mucB/samB family C-terminal domain AE940_RS05600 PF13438 Domain of unknown function (DUF4113) AE940_RS05600 PF00817 impB/mucB/samB family AE940_RS05605 PF00717 Peptidase S24-like AE940_RS05615 PF00072 Response regulator receiver domain AE940_RS05615 PF04397 LytTr DNA-binding domain AE940_RS05625 PF00005 ABC transporter AE940_RS05625 PF12704 MacB-like periplasmic core domain AE940_RS05625 PF02687 FtsX-like permease family AE940_RS05630 PF00005 ABC transporter AE940_RS05635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AE940_RS05650 PF01654 Cytochrome bd terminal oxidase subunit I AE940_RS05660 PF05406 WGR domain AE940_RS05675 PF04055 Radical SAM superfamily AE940_RS05675 PF06969 HemN C-terminal domain AE940_RS05685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AE940_RS05685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AE940_RS05690 PF12002 MgsA AAA+ ATPase C terminal AE940_RS05690 PF00004 ATPase family associated with various cellular activities (AAA) AE940_RS05690 PF16193 AAA C-terminal domain AE940_RS05695 PF00703 Glycosyl hydrolases family 2 AE940_RS05695 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AE940_RS05695 PF02837 Glycosyl hydrolases family 2, sugar binding domain AE940_RS05695 PF16355 Domain of unknown function (DUF4982) AE940_RS05695 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AE940_RS05705 PF02350 UDP-N-acetylglucosamine 2-epimerase AE940_RS05710 PF03458 UPF0126 domain AE940_RS05720 PF01435 Peptidase family M48 AE940_RS05725 PF04011 LemA family AE940_RS05730 PF08281 Sigma-70, region 4 AE940_RS05730 PF04542 Sigma-70 region 2 AE940_RS05740 PF07715 TonB-dependent Receptor Plug Domain AE940_RS05740 PF00593 TonB dependent receptor AE940_RS05750 PF00912 Transglycosylase AE940_RS05755 PF00691 OmpA family AE940_RS05755 PF01389 OmpA-like transmembrane domain AE940_RS05760 PF01554 MatE AE940_RS05765 PF00892 EamA-like transporter family AE940_RS05795 PF00216 Bacterial DNA-binding protein AE940_RS05855 PF17820 PDZ domain AE940_RS05855 PF13180 PDZ domain AE940_RS05870 PF00583 Acetyltransferase (GNAT) family AE940_RS05870 PF01047 MarR family AE940_RS05875 PF01593 Flavin containing amine oxidoreductase AE940_RS05880 PF06969 HemN C-terminal domain AE940_RS05880 PF04055 Radical SAM superfamily AE940_RS05885 PF07690 Major Facilitator Superfamily AE940_RS05890 PF00593 TonB dependent receptor AE940_RS05890 PF07715 TonB-dependent Receptor Plug Domain AE940_RS05915 PF00593 TonB dependent receptor AE940_RS05915 PF07715 TonB-dependent Receptor Plug Domain AE940_RS05920 PF00593 TonB dependent receptor AE940_RS05920 PF07715 TonB-dependent Receptor Plug Domain AE940_RS05960 PF10531 SLBB domain AE940_RS05960 PF02563 Polysaccharide biosynthesis/export protein AE940_RS06025 PF04717 Type VI secretion system, phage-baseplate injector AE940_RS06075 PF07724 AAA domain (Cdc48 subfamily) AE940_RS06075 PF10431 C-terminal, D2-small domain, of ClpB protein AE940_RS06075 PF17871 AAA lid domain AE940_RS06075 PF02861 Clp amino terminal domain, pathogenicity island component AE940_RS06075 PF00004 ATPase family associated with various cellular activities (AAA) AE940_RS06100 PF00155 Aminotransferase class I and II AE940_RS06125 PF00005 ABC transporter AE940_RS06125 PF12848 ABC transporter AE940_RS06145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS06145 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS06145 PF00497 Bacterial extracellular solute-binding proteins, family 3 AE940_RS06145 PF01627 Hpt domain AE940_RS06145 PF00072 Response regulator receiver domain AE940_RS06160 PF00535 Glycosyl transferase family 2 AE940_RS06165 PF00534 Glycosyl transferases group 1 AE940_RS06165 PF13439 Glycosyltransferase Family 4 AE940_RS06170 PF08759 Glycosyltransferase GT-D fold AE940_RS06170 PF01501 Glycosyl transferase family 8 AE940_RS06180 PF01943 Polysaccharide biosynthesis protein AE940_RS06185 PF00534 Glycosyl transferases group 1 AE940_RS06185 PF13439 Glycosyltransferase Family 4 AE940_RS06195 PF00535 Glycosyl transferase family 2 AE940_RS06220 PF03051 Peptidase C1-like family AE940_RS06225 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AE940_RS06225 PF11973 NQRA C-terminal domain AE940_RS06230 PF03116 NQR2, RnfD, RnfE family AE940_RS06235 PF04205 FMN-binding domain AE940_RS06240 PF02508 Rnf-Nqr subunit, membrane protein AE940_RS06245 PF02508 Rnf-Nqr subunit, membrane protein AE940_RS06250 PF00175 Oxidoreductase NAD-binding domain AE940_RS06250 PF00970 Oxidoreductase FAD-binding domain AE940_RS06250 PF00111 2Fe-2S iron-sulfur cluster binding domain AE940_RS06255 PF00270 DEAD/DEAH box helicase AE940_RS06255 PF00271 Helicase conserved C-terminal domain AE940_RS06255 PF03880 DbpA RNA binding domain AE940_RS06260 PF00266 Aminotransferase class-V AE940_RS06265 PF01842 ACT domain AE940_RS06265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AE940_RS06265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AE940_RS06275 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AE940_RS06275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AE940_RS06280 PF09186 Domain of unknown function (DUF1949) AE940_RS06280 PF01205 Uncharacterized protein family UPF0029 AE940_RS06290 PF00881 Nitroreductase family AE940_RS06295 PF02347 Glycine cleavage system P-protein AE940_RS06300 PF00753 Metallo-beta-lactamase superfamily AE940_RS06305 PF02527 rRNA small subunit methyltransferase G AE940_RS06330 PF00403 Heavy-metal-associated domain AE940_RS06340 PF03099 Biotin/lipoate A/B protein ligase family AE940_RS06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS06370 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS06370 PF00989 PAS fold AE940_RS06375 PF00072 Response regulator receiver domain AE940_RS06375 PF02954 Bacterial regulatory protein, Fis family AE940_RS06375 PF00158 Sigma-54 interaction domain AE940_RS06395 PF00005 ABC transporter AE940_RS06405 PF01926 50S ribosome-binding GTPase AE940_RS06410 PF00474 Sodium:solute symporter family AE940_RS06415 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family AE940_RS06430 PF02132 RecR protein AE940_RS06430 PF13662 Toprim domain AE940_RS06445 PF02622 Uncharacterized ACR, COG1678 AE940_RS06460 PF00248 Aldo/keto reductase family AE940_RS06470 PF00248 Aldo/keto reductase family AE940_RS06480 PF00248 Aldo/keto reductase family AE940_RS06485 PF00248 Aldo/keto reductase family AE940_RS06500 PF00155 Aminotransferase class I and II AE940_RS06535 PF00465 Iron-containing alcohol dehydrogenase AE940_RS06540 PF00132 Bacterial transferase hexapeptide (six repeats) AE940_RS06545 PF12706 Beta-lactamase superfamily domain AE940_RS06560 PF00248 Aldo/keto reductase family AE940_RS06570 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AE940_RS06575 PF04235 Protein of unknown function (DUF418) AE940_RS06580 PF00248 Aldo/keto reductase family AE940_RS06600 PF00873 AcrB/AcrD/AcrF family AE940_RS06615 PF03572 Peptidase family S41 AE940_RS06615 PF01471 Putative peptidoglycan binding domain AE940_RS06615 PF13180 PDZ domain AE940_RS06645 PF00593 TonB dependent receptor AE940_RS06645 PF07715 TonB-dependent Receptor Plug Domain AE940_RS06670 PF00440 Bacterial regulatory proteins, tetR family AE940_RS06680 PF00005 ABC transporter AE940_RS06680 PF04954 Siderophore-interacting protein AE940_RS06680 PF08021 Siderophore-interacting FAD-binding domain AE940_RS06680 PF00664 ABC transporter transmembrane region AE940_RS06685 PF00664 ABC transporter transmembrane region AE940_RS06685 PF00005 ABC transporter AE940_RS06690 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS06690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS06705 PF01037 Lrp/AsnC ligand binding domain AE940_RS06725 PF11922 Domain of unknown function (DUF3440) AE940_RS06725 PF01507 Phosphoadenosine phosphosulfate reductase family AE940_RS06730 PF02195 ParB-like nuclease domain AE940_RS06770 PF01370 NAD dependent epimerase/dehydratase family AE940_RS06775 PF00072 Response regulator receiver domain AE940_RS06775 PF00486 Transcriptional regulatory protein, C terminal AE940_RS06785 PF12705 PD-(D/E)XK nuclease superfamily AE940_RS06785 PF13361 UvrD-like helicase C-terminal domain AE940_RS06785 PF00580 UvrD/REP helicase N-terminal domain AE940_RS06790 PF00728 Glycosyl hydrolase family 20, catalytic domain AE940_RS06790 PF07691 PA14 domain AE940_RS06790 PF02838 Glycosyl hydrolase family 20, domain 2 AE940_RS06800 PF07715 TonB-dependent Receptor Plug Domain AE940_RS06800 PF00593 TonB dependent receptor AE940_RS06810 PF05762 VWA domain containing CoxE-like protein AE940_RS06815 PF17868 AAA lid domain AE940_RS06815 PF07728 AAA domain (dynein-related subfamily) AE940_RS06815 PF12592 Protein of unknown function (DUF3763) AE940_RS06830 PF00501 AMP-binding enzyme AE940_RS06835 PF02080 TrkA-C domain AE940_RS06835 PF00999 Sodium/hydrogen exchanger family AE940_RS06835 PF03471 Transporter associated domain AE940_RS06840 PF00860 Permease family AE940_RS06845 PF03063 Prismane/CO dehydrogenase family AE940_RS06855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS06855 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS06855 PF00989 PAS fold AE940_RS06860 PF02954 Bacterial regulatory protein, Fis family AE940_RS06860 PF00158 Sigma-54 interaction domain AE940_RS06860 PF00072 Response regulator receiver domain AE940_RS06880 PF00005 ABC transporter AE940_RS06880 PF02687 FtsX-like permease family AE940_RS06880 PF12704 MacB-like periplasmic core domain AE940_RS06885 PF12704 MacB-like periplasmic core domain AE940_RS06885 PF02687 FtsX-like permease family AE940_RS06885 PF00005 ABC transporter AE940_RS06890 PF12704 MacB-like periplasmic core domain AE940_RS06890 PF00005 ABC transporter AE940_RS06890 PF02687 FtsX-like permease family AE940_RS06895 PF02687 FtsX-like permease family AE940_RS06895 PF12704 MacB-like periplasmic core domain AE940_RS06895 PF00005 ABC transporter AE940_RS06905 PF01554 MatE AE940_RS06910 PF13419 Haloacid dehalogenase-like hydrolase AE940_RS06915 PF01180 Dihydroorotate dehydrogenase AE940_RS06925 PF02548 Ketopantoate hydroxymethyltransferase AE940_RS06935 PF01219 Prokaryotic diacylglycerol kinase AE940_RS06940 PF02824 TGS domain AE940_RS06940 PF04607 Region found in RelA / SpoT proteins AE940_RS06940 PF13291 ACT domain AE940_RS06955 PF02222 ATP-grasp domain AE940_RS06960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AE940_RS06960 PF02874 ATP synthase alpha/beta family, beta-barrel domain AE940_RS06965 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AE940_RS06975 PF00119 ATP synthase A chain AE940_RS06980 PF00137 ATP synthase subunit C AE940_RS06985 PF00430 ATP synthase B/B' CF(0) AE940_RS06990 PF00213 ATP synthase delta (OSCP) subunit AE940_RS06995 PF02874 ATP synthase alpha/beta family, beta-barrel domain AE940_RS06995 PF00306 ATP synthase alpha/beta chain, C terminal domain AE940_RS06995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AE940_RS07000 PF00231 ATP synthase AE940_RS07005 PF05970 PIF1-like helicase AE940_RS07005 PF14493 Helix-turn-helix domain AE940_RS07010 PF00085 Thioredoxin AE940_RS07020 PF00529 HlyD membrane-fusion protein of T1SS AE940_RS07020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AE940_RS07025 PF00873 AcrB/AcrD/AcrF family AE940_RS07030 PF00486 Transcriptional regulatory protein, C terminal AE940_RS07030 PF00072 Response regulator receiver domain AE940_RS07035 PF18719 ArlS sensor domain AE940_RS07035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS07035 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS07050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AE940_RS07060 PF01032 FecCD transport family AE940_RS07065 PF00005 ABC transporter AE940_RS07070 PF04321 RmlD substrate binding domain AE940_RS07085 PF00486 Transcriptional regulatory protein, C terminal AE940_RS07085 PF00072 Response regulator receiver domain AE940_RS07090 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS07090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS07100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS07100 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS07105 PF01268 Formate--tetrahydrofolate ligase AE940_RS07115 PF00464 Serine hydroxymethyltransferase AE940_RS07125 PF01613 Flavin reductase like domain AE940_RS07130 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AE940_RS07130 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AE940_RS07135 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AE940_RS07135 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AE940_RS07145 PF03956 Lysine exporter LysO AE940_RS07170 PF04261 Dyp-type peroxidase family AE940_RS07180 PF00593 TonB dependent receptor AE940_RS07180 PF07715 TonB-dependent Receptor Plug Domain AE940_RS07200 PF02348 Cytidylyltransferase AE940_RS07210 PF17092 Penicillin-binding protein OB-like domain AE940_RS07210 PF00912 Transglycosylase AE940_RS07210 PF00905 Penicillin binding protein transpeptidase domain AE940_RS07230 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AE940_RS07230 PF14572 Phosphoribosyl synthetase-associated domain AE940_RS07235 PF07689 KaiB domain AE940_RS07235 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS07235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS07445 PF00436 Single-strand binding protein family AE940_RS07450 PF13662 Toprim domain AE940_RS07450 PF08275 DNA primase catalytic core, N-terminal domain AE940_RS07450 PF01807 CHC2 zinc finger AE940_RS07450 PF16730 DnaG-primase C-terminal, helicase-binding domain AE940_RS07510 PF00425 chorismate binding enzyme AE940_RS07515 PF01063 Amino-transferase class IV AE940_RS07525 PF02806 Alpha amylase, C-terminal all-beta domain AE940_RS07525 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AE940_RS07525 PF00128 Alpha amylase, catalytic domain AE940_RS07530 PF00128 Alpha amylase, catalytic domain AE940_RS07535 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AE940_RS07535 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AE940_RS07540 PF01734 Patatin-like phospholipase AE940_RS07545 PF07690 Major Facilitator Superfamily AE940_RS07550 PF00120 Glutamine synthetase, catalytic domain AE940_RS07550 PF03951 Glutamine synthetase, beta-Grasp domain AE940_RS07560 PF00106 short chain dehydrogenase AE940_RS07565 PF01569 PAP2 superfamily AE940_RS07575 PF00549 CoA-ligase AE940_RS07575 PF02629 CoA binding domain AE940_RS07580 PF08442 ATP-grasp domain AE940_RS07580 PF00549 CoA-ligase AE940_RS07585 PF00698 Acyl transferase domain AE940_RS07590 PF08543 Phosphomethylpyrimidine kinase AE940_RS07600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AE940_RS07600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AE940_RS07605 PF01261 Xylose isomerase-like TIM barrel AE940_RS07610 PF00083 Sugar (and other) transporter AE940_RS07620 PF00795 Carbon-nitrogen hydrolase AE940_RS07620 PF00583 Acetyltransferase (GNAT) family AE940_RS07625 PF10417 C-terminal domain of 1-Cys peroxiredoxin AE940_RS07625 PF00578 AhpC/TSA family AE940_RS07630 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AE940_RS07635 PF14376 Haem-binding domain AE940_RS07635 PF03150 Di-haem cytochrome c peroxidase AE940_RS07635 PF00034 Cytochrome c AE940_RS07640 PF01578 Cytochrome C assembly protein AE940_RS07655 PF10951 Protein of unknown function (DUF2776) AE940_RS07660 PF08264 Anticodon-binding domain of tRNA AE940_RS07660 PF00133 tRNA synthetases class I (I, L, M and V) AE940_RS07670 PF01252 Signal peptidase (SPase) II AE940_RS07685 PF00588 SpoU rRNA Methylase family AE940_RS07685 PF08032 RNA 2'-O ribose methyltransferase substrate binding AE940_RS07725 PF07690 Major Facilitator Superfamily AE940_RS07735 PF00753 Metallo-beta-lactamase superfamily AE940_RS07745 PF02614 Glucuronate isomerase AE940_RS07760 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AE940_RS07765 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AE940_RS07765 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AE940_RS07765 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AE940_RS07775 PF00271 Helicase conserved C-terminal domain AE940_RS07775 PF00270 DEAD/DEAH box helicase AE940_RS07795 PF01702 Queuine tRNA-ribosyltransferase AE940_RS07800 PF02190 ATP-dependent protease La (LON) substrate-binding domain AE940_RS07800 PF00004 ATPase family associated with various cellular activities (AAA) AE940_RS07800 PF05362 Lon protease (S16) C-terminal proteolytic domain AE940_RS07805 PF05175 Methyltransferase small domain AE940_RS07830 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS07830 PF07689 KaiB domain AE940_RS07830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS07835 PF00158 Sigma-54 interaction domain AE940_RS07835 PF02954 Bacterial regulatory protein, Fis family AE940_RS07835 PF00072 Response regulator receiver domain AE940_RS07880 PF02687 FtsX-like permease family AE940_RS07880 PF12704 MacB-like periplasmic core domain AE940_RS07880 PF00005 ABC transporter AE940_RS07885 PF00578 AhpC/TSA family AE940_RS07945 PF01867 CRISPR associated protein Cas1 AE940_RS07950 PF09827 CRISPR associated protein Cas2 AE940_RS07960 PF00155 Aminotransferase class I and II AE940_RS07965 PF00781 Diacylglycerol kinase catalytic domain AE940_RS07970 PF01336 OB-fold nucleic acid binding domain AE940_RS07970 PF02938 GAD domain AE940_RS07970 PF00152 tRNA synthetases class II (D, K and N) AE940_RS07980 PF00795 Carbon-nitrogen hydrolase AE940_RS07985 PF04371 Porphyromonas-type peptidyl-arginine deiminase AE940_RS07995 PF12704 MacB-like periplasmic core domain AE940_RS07995 PF02687 FtsX-like permease family AE940_RS07995 PF00005 ABC transporter AE940_RS08020 PF01784 NIF3 (NGG1p interacting factor 3) AE940_RS08030 PF02321 Outer membrane efflux protein AE940_RS08035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AE940_RS08040 PF00873 AcrB/AcrD/AcrF family AE940_RS08050 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AE940_RS08050 PF01048 Phosphorylase superfamily AE940_RS08065 PF00175 Oxidoreductase NAD-binding domain AE940_RS08065 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AE940_RS08070 PF01180 Dihydroorotate dehydrogenase AE940_RS08075 PF01746 tRNA (Guanine-1)-methyltransferase AE940_RS08080 PF12826 Helix-hairpin-helix motif AE940_RS08080 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AE940_RS08080 PF03120 NAD-dependent DNA ligase OB-fold domain AE940_RS08080 PF00533 BRCA1 C Terminus (BRCT) domain AE940_RS08080 PF01653 NAD-dependent DNA ligase adenylation domain AE940_RS08085 PF00701 Dihydrodipicolinate synthetase family AE940_RS08090 PF00302 Chloramphenicol acetyltransferase AE940_RS08095 PF04237 YjbR AE940_RS08100 PF03781 Sulfatase-modifying factor enzyme 1 AE940_RS08120 PF00027 Cyclic nucleotide-binding domain AE940_RS08120 PF01734 Patatin-like phospholipase AE940_RS08125 PF00183 Hsp90 protein AE940_RS08130 PF17871 AAA lid domain AE940_RS08130 PF07724 AAA domain (Cdc48 subfamily) AE940_RS08130 PF02861 Clp amino terminal domain, pathogenicity island component AE940_RS08130 PF10431 C-terminal, D2-small domain, of ClpB protein AE940_RS08130 PF00004 ATPase family associated with various cellular activities (AAA) AE940_RS08135 PF00521 DNA gyrase/topoisomerase IV, subunit A AE940_RS08135 PF03989 DNA gyrase C-terminal domain, beta-propeller AE940_RS08170 PF07584 Aerotolerance regulator N-terminal AE940_RS08170 PF13519 von Willebrand factor type A domain AE940_RS08175 PF13519 von Willebrand factor type A domain AE940_RS08185 PF01882 Protein of unknown function DUF58 AE940_RS08190 PF17863 AAA lid domain AE940_RS08190 PF07726 ATPase family associated with various cellular activities (AAA) AE940_RS08195 PF01476 LysM domain AE940_RS08195 PF04972 BON domain AE940_RS08200 PF00216 Bacterial DNA-binding protein AE940_RS08205 PF18693 TRAM domain AE940_RS08205 PF00919 Uncharacterized protein family UPF0004 AE940_RS08205 PF04055 Radical SAM superfamily AE940_RS08210 PF02881 SRP54-type protein, helical bundle domain AE940_RS08210 PF00448 SRP54-type protein, GTPase domain AE940_RS08215 PF00471 Ribosomal protein L33 AE940_RS08220 PF00830 Ribosomal L28 family AE940_RS08225 PF02464 Competence-damaged protein AE940_RS08225 PF18146 Damage-inducible protein CinA KH domain AE940_RS08225 PF00994 Probable molybdopterin binding domain AE940_RS08230 PF00814 Glycoprotease family AE940_RS08245 PF03129 Anticodon binding domain AE940_RS08245 PF09180 Prolyl-tRNA synthetase, C-terminal AE940_RS08245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AE940_RS08255 PF14684 Tricorn protease C1 domain AE940_RS08255 PF03572 Peptidase family S41 AE940_RS08255 PF07676 WD40-like Beta Propeller Repeat AE940_RS08255 PF14685 Tricorn protease PDZ domain AE940_RS08265 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AE940_RS08270 PF02277 Phosphoribosyltransferase AE940_RS08275 PF02654 Cobalamin-5-phosphate synthase AE940_RS08285 PF03186 CobD/Cbib protein AE940_RS08290 PF00155 Aminotransferase class I and II AE940_RS08295 PF07685 CobB/CobQ-like glutamine amidotransferase domain AE940_RS08295 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AE940_RS08335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS08335 PF18415 Histidine kinase receptor ArcB trans-membrane domain AE940_RS08335 PF01627 Hpt domain AE940_RS08335 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS08335 PF00072 Response regulator receiver domain AE940_RS08335 PF00989 PAS fold AE940_RS08340 PF01923 Cobalamin adenosyltransferase AE940_RS08345 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AE940_RS08345 PF07685 CobB/CobQ-like glutamine amidotransferase domain AE940_RS08360 PF06738 Putative threonine/serine exporter AE940_RS08365 PF02080 TrkA-C domain AE940_RS08365 PF06826 Predicted Permease Membrane Region AE940_RS08370 PF00593 TonB dependent receptor AE940_RS08370 PF07715 TonB-dependent Receptor Plug Domain AE940_RS08380 PF07715 TonB-dependent Receptor Plug Domain AE940_RS08380 PF00593 TonB dependent receptor AE940_RS08390 PF02514 CobN/Magnesium Chelatase AE940_RS08390 PF11965 Domain of unknown function (DUF3479) AE940_RS08410 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AE940_RS08410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AE940_RS08415 PF05175 Methyltransferase small domain AE940_RS08420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AE940_RS08425 PF01888 CbiD AE940_RS08475 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AE940_RS08480 PF13361 UvrD-like helicase C-terminal domain AE940_RS08480 PF00580 UvrD/REP helicase N-terminal domain AE940_RS08485 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AE940_RS08485 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AE940_RS08495 PF02581 Thiamine monophosphate synthase AE940_RS08500 PF05690 Thiazole biosynthesis protein ThiG AE940_RS08505 PF13667 ThiC-associated domain AE940_RS08505 PF01964 Radical SAM ThiC family AE940_RS08515 PF06968 Biotin and Thiamin Synthesis associated domain AE940_RS08515 PF04055 Radical SAM superfamily AE940_RS08520 PF00581 Rhodanese-like domain AE940_RS08520 PF00899 ThiF family AE940_RS08525 PF02581 Thiamine monophosphate synthase AE940_RS08585 PF00391 PEP-utilising enzyme, mobile domain AE940_RS08585 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AE940_RS08585 PF02896 PEP-utilising enzyme, TIM barrel domain AE940_RS08590 PF01938 TRAM domain AE940_RS08590 PF05958 tRNA (Uracil-5-)-methyltransferase AE940_RS08595 PF00849 RNA pseudouridylate synthase AE940_RS08610 PF09827 CRISPR associated protein Cas2 AE940_RS08615 PF01867 CRISPR associated protein Cas1 AE940_RS08630 PF00557 Metallopeptidase family M24 AE940_RS08635 PF02646 RmuC family AE940_RS08645 PF06965 Na+/H+ antiporter 1 AE940_RS08655 PF00679 Elongation factor G C-terminus AE940_RS08655 PF00009 Elongation factor Tu GTP binding domain AE940_RS08655 PF03144 Elongation factor Tu domain 2 AE940_RS08655 PF06421 GTP-binding protein LepA C-terminus AE940_RS08670 PF01894 Uncharacterised protein family UPF0047 AE940_RS08675 PF03372 Endonuclease/Exonuclease/phosphatase family AE940_RS08680 PF01566 Natural resistance-associated macrophage protein AE940_RS08695 PF01709 Transcriptional regulator AE940_RS08700 PF03147 Ferredoxin-fold anticodon binding domain AE940_RS08700 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AE940_RS08700 PF03483 B3/4 domain AE940_RS08700 PF03484 tRNA synthetase B5 domain AE940_RS08700 PF01588 Putative tRNA binding domain AE940_RS08705 PF00953 Glycosyl transferase family 4 AE940_RS08710 PF01370 NAD dependent epimerase/dehydratase family AE940_RS08715 PF00534 Glycosyl transferases group 1 AE940_RS08715 PF13439 Glycosyltransferase Family 4 AE940_RS08720 PF13439 Glycosyltransferase Family 4 AE940_RS08720 PF00534 Glycosyl transferases group 1 AE940_RS08725 PF00534 Glycosyl transferases group 1 AE940_RS08725 PF13439 Glycosyltransferase Family 4 AE940_RS08735 PF00535 Glycosyl transferase family 2 AE940_RS08745 PF00535 Glycosyl transferase family 2 AE940_RS08750 PF16363 GDP-mannose 4,6 dehydratase AE940_RS08755 PF01370 NAD dependent epimerase/dehydratase family AE940_RS08760 PF16363 GDP-mannose 4,6 dehydratase AE940_RS08765 PF00483 Nucleotidyl transferase AE940_RS08770 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AE940_RS08795 PF00772 DnaB-like helicase N terminal domain AE940_RS08795 PF03796 DnaB-like helicase C terminal domain AE940_RS08800 PF08544 GHMP kinases C terminal AE940_RS08800 PF00288 GHMP kinases N terminal domain AE940_RS08815 PF16363 GDP-mannose 4,6 dehydratase AE940_RS08820 PF02508 Rnf-Nqr subunit, membrane protein AE940_RS08825 PF02508 Rnf-Nqr subunit, membrane protein AE940_RS08830 PF04205 FMN-binding domain AE940_RS08835 PF03116 NQR2, RnfD, RnfE family AE940_RS08840 PF13375 RnfC Barrel sandwich hybrid domain AE940_RS08840 PF13237 4Fe-4S dicluster domain AE940_RS08840 PF10531 SLBB domain AE940_RS08840 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AE940_RS08845 PF04060 Putative Fe-S cluster AE940_RS08870 PF06418 CTP synthase N-terminus AE940_RS08870 PF00117 Glutamine amidotransferase class-I AE940_RS08875 PF14849 YidC periplasmic domain AE940_RS08875 PF02096 60Kd inner membrane protein AE940_RS08880 PF01554 MatE AE940_RS08885 PF00326 Prolyl oligopeptidase family AE940_RS08885 PF07676 WD40-like Beta Propeller Repeat AE940_RS08885 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AE940_RS08890 PF12706 Beta-lactamase superfamily domain AE940_RS08900 PF03551 Transcriptional regulator PadR-like family AE940_RS08910 PF00854 POT family AE940_RS08915 PF04073 Aminoacyl-tRNA editing domain AE940_RS08920 PF17760 UvrA interaction domain AE940_RS08920 PF17755 UvrA DNA-binding domain AE940_RS08925 PF01476 LysM domain AE940_RS08925 PF05257 CHAP domain AE940_RS08955 PF00501 AMP-binding enzyme AE940_RS08955 PF14535 AMP-binding enzyme C-terminal domain AE940_RS08960 PF04851 Type III restriction enzyme, res subunit AE940_RS08960 PF12344 Ultra-violet resistance protein B AE940_RS08960 PF17757 UvrB interaction domain AE940_RS08960 PF00271 Helicase conserved C-terminal domain AE940_RS08965 PF02698 DUF218 domain AE940_RS08975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AE940_RS08975 PF02272 DHHA1 domain AE940_RS08975 PF01411 tRNA synthetases class II (A) AE940_RS08985 PF01627 Hpt domain AE940_RS08985 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS08985 PF00672 HAMP domain AE940_RS08985 PF00072 Response regulator receiver domain AE940_RS08985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS09000 PF00005 ABC transporter AE940_RS09030 PF02142 MGS-like domain AE940_RS09030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AE940_RS09030 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AE940_RS09035 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AE940_RS09035 PF00117 Glutamine amidotransferase class-I AE940_RS09040 PF00156 Phosphoribosyl transferase domain AE940_RS09045 PF01380 SIS domain AE940_RS09050 PF13537 Glutamine amidotransferase domain AE940_RS09050 PF00733 Asparagine synthase AE940_RS09070 PF01678 Diaminopimelate epimerase AE940_RS09075 PF00155 Aminotransferase class I and II AE940_RS09085 PF17941 Polyphosphate kinase C-terminal domain 1 AE940_RS09085 PF13089 Polyphosphate kinase N-terminal domain AE940_RS09085 PF02503 Polyphosphate kinase middle domain AE940_RS09085 PF13090 Polyphosphate kinase C-terminal domain 2 AE940_RS09090 PF02541 Ppx/GppA phosphatase family AE940_RS09095 PF00465 Iron-containing alcohol dehydrogenase AE940_RS09105 PF00291 Pyridoxal-phosphate dependent enzyme AE940_RS09110 PF00425 chorismate binding enzyme AE940_RS09110 PF04715 Anthranilate synthase component I, N terminal region AE940_RS09115 PF00117 Glutamine amidotransferase class-I AE940_RS09115 PF02885 Glycosyl transferase family, helical bundle domain AE940_RS09115 PF00591 Glycosyl transferase family, a/b domain AE940_RS09120 PF00591 Glycosyl transferase family, a/b domain AE940_RS09120 PF02885 Glycosyl transferase family, helical bundle domain AE940_RS09125 PF00218 Indole-3-glycerol phosphate synthase AE940_RS09130 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AE940_RS09135 PF00290 Tryptophan synthase alpha chain AE940_RS09140 PF17763 Glutaminase/Asparaginase C-terminal domain AE940_RS09140 PF00710 Asparaginase, N-terminal AE940_RS09150 PF08448 PAS fold AE940_RS09150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS09150 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS09150 PF13426 PAS domain AE940_RS09150 PF00072 Response regulator receiver domain AE940_RS09155 PF02397 Bacterial sugar transferase AE940_RS09165 PF12464 Maltose acetyltransferase AE940_RS09165 PF00132 Bacterial transferase hexapeptide (six repeats) AE940_RS09170 PF00072 Response regulator receiver domain AE940_RS09170 PF00196 Bacterial regulatory proteins, luxR family AE940_RS09180 PF02142 MGS-like domain AE940_RS09180 PF01808 AICARFT/IMPCHase bienzyme AE940_RS09185 PF00258 Flavodoxin AE940_RS09205 PF00085 Thioredoxin AE940_RS09210 PF03150 Di-haem cytochrome c peroxidase AE940_RS09220 PF00593 TonB dependent receptor AE940_RS09220 PF07715 TonB-dependent Receptor Plug Domain AE940_RS09225 PF04235 Protein of unknown function (DUF418) AE940_RS09225 PF07786 Protein of unknown function (DUF1624) AE940_RS09230 PF07690 Major Facilitator Superfamily AE940_RS09240 PF06826 Predicted Permease Membrane Region AE940_RS09240 PF02080 TrkA-C domain AE940_RS09245 PF16916 Dimerisation domain of Zinc Transporter AE940_RS09245 PF01545 Cation efflux family AE940_RS09265 PF07715 TonB-dependent Receptor Plug Domain AE940_RS09265 PF00593 TonB dependent receptor AE940_RS09270 PF02514 CobN/Magnesium Chelatase AE940_RS09290 PF03477 ATP cone domain AE940_RS09290 PF00317 Ribonucleotide reductase, all-alpha domain AE940_RS09290 PF02867 Ribonucleotide reductase, barrel domain AE940_RS09295 PF00268 Ribonucleotide reductase, small chain AE940_RS09305 PF06738 Putative threonine/serine exporter AE940_RS09310 PF12821 Threonine/Serine exporter, ThrE AE940_RS09310 PF06738 Putative threonine/serine exporter AE940_RS09320 PF00294 pfkB family carbohydrate kinase AE940_RS09325 PF00356 Bacterial regulatory proteins, lacI family AE940_RS09325 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AE940_RS09335 PF01638 HxlR-like helix-turn-helix AE940_RS09340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS09340 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS09340 PF01627 Hpt domain AE940_RS09340 PF00497 Bacterial extracellular solute-binding proteins, family 3 AE940_RS09340 PF00072 Response regulator receiver domain AE940_RS09360 PF00472 RF-1 domain AE940_RS09365 PF01139 tRNA-splicing ligase RtcB AE940_RS09385 PF00886 Ribosomal protein S16 AE940_RS09400 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AE940_RS09405 PF13416 Bacterial extracellular solute-binding protein AE940_RS09410 PF00528 Binding-protein-dependent transport system inner membrane component AE940_RS09415 PF00528 Binding-protein-dependent transport system inner membrane component AE940_RS09420 PF00005 ABC transporter AE940_RS09420 PF08402 TOBE domain AE940_RS09425 PF00578 AhpC/TSA family AE940_RS09435 PF00343 Carbohydrate phosphorylase AE940_RS09435 PF11897 Protein of unknown function (DUF3417) AE940_RS09445 PF00137 ATP synthase subunit C AE940_RS09460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AE940_RS09460 PF02874 ATP synthase alpha/beta family, beta-barrel domain AE940_RS09465 PF02874 ATP synthase alpha/beta family, beta-barrel domain AE940_RS09465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AE940_RS09465 PF16886 ATPsynthase alpha/beta subunit N-term extension AE940_RS09515 PF01979 Amidohydrolase family AE940_RS09520 PF00486 Transcriptional regulatory protein, C terminal AE940_RS09520 PF00072 Response regulator receiver domain AE940_RS09525 PF18719 ArlS sensor domain AE940_RS09525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS09525 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS09550 PF00140 Sigma-70 factor, region 1.2 AE940_RS09550 PF03979 Sigma-70 factor, region 1.1 AE940_RS09550 PF04542 Sigma-70 region 2 AE940_RS09550 PF04539 Sigma-70 region 3 AE940_RS09550 PF04545 Sigma-70, region 4 AE940_RS09560 PF13180 PDZ domain AE940_RS09560 PF17820 PDZ domain AE940_RS09570 PF13378 Enolase C-terminal domain-like AE940_RS09570 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AE940_RS09575 PF00877 NlpC/P60 family AE940_RS09575 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain AE940_RS09585 PF03631 Virulence factor BrkB AE940_RS09590 PF00881 Nitroreductase family AE940_RS09595 PF00677 Lumazine binding domain AE940_RS09600 PF01895 PhoU domain AE940_RS09605 PF00005 ABC transporter AE940_RS09610 PF00528 Binding-protein-dependent transport system inner membrane component AE940_RS09615 PF00528 Binding-protein-dependent transport system inner membrane component AE940_RS09625 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AE940_RS09625 PF00749 tRNA synthetases class I (E and Q), catalytic domain AE940_RS09645 PF08534 Redoxin AE940_RS09655 PF02796 Helix-turn-helix domain of resolvase AE940_RS09655 PF00239 Resolvase, N terminal domain AE940_RS09665 PF02397 Bacterial sugar transferase AE940_RS09675 PF13614 AAA domain AE940_RS09680 PF01510 N-acetylmuramoyl-L-alanine amidase AE940_RS09710 PF01757 Acyltransferase family AE940_RS09745 PF00535 Glycosyl transferase family 2 AE940_RS09765 PF00535 Glycosyl transferase family 2 AE940_RS09780 PF00534 Glycosyl transferases group 1 AE940_RS09780 PF13439 Glycosyltransferase Family 4 AE940_RS09785 PF02463 RecF/RecN/SMC N terminal domain AE940_RS09795 PF03808 Glycosyl transferase WecB/TagA/CpsF family AE940_RS09840 PF01050 Mannose-6-phosphate isomerase AE940_RS09840 PF00483 Nucleotidyl transferase AE940_RS09845 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AE940_RS09850 PF00364 Biotin-requiring enzyme AE940_RS09850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AE940_RS09850 PF02817 e3 binding domain AE940_RS09875 PF01168 Alanine racemase, N-terminal domain AE940_RS09880 PF01180 Dihydroorotate dehydrogenase AE940_RS09935 PF13193 AMP-binding enzyme C-terminal domain AE940_RS09935 PF00668 Condensation domain AE940_RS09935 PF00550 Phosphopantetheine attachment site AE940_RS09935 PF00501 AMP-binding enzyme AE940_RS09940 PF07715 TonB-dependent Receptor Plug Domain AE940_RS09940 PF00593 TonB dependent receptor AE940_RS09945 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS09945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS09945 PF00497 Bacterial extracellular solute-binding proteins, family 3 AE940_RS09950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS09950 PF08447 PAS fold AE940_RS09950 PF08448 PAS fold AE940_RS09960 PF13581 Histidine kinase-like ATPase domain AE940_RS09970 PF07228 Stage II sporulation protein E (SpoIIE) AE940_RS09970 PF13426 PAS domain AE940_RS09990 PF02719 Polysaccharide biosynthesis protein AE940_RS09995 PF13638 PIN domain AE940_RS09995 PF02562 PhoH-like protein AE940_RS10000 PF08245 Mur ligase middle domain AE940_RS10000 PF02875 Mur ligase family, glutamate ligase domain AE940_RS10005 PF01042 Endoribonuclease L-PSP AE940_RS10015 PF08032 RNA 2'-O ribose methyltransferase substrate binding AE940_RS10015 PF00588 SpoU rRNA Methylase family AE940_RS10020 PF02463 RecF/RecN/SMC N terminal domain AE940_RS10025 PF04127 DNA / pantothenate metabolism flavoprotein AE940_RS10025 PF02441 Flavoprotein AE940_RS10030 PF00929 Exonuclease AE940_RS10035 PF00712 DNA polymerase III beta subunit, N-terminal domain AE940_RS10035 PF02768 DNA polymerase III beta subunit, C-terminal domain AE940_RS10035 PF02767 DNA polymerase III beta subunit, central domain AE940_RS10050 PF12706 Beta-lactamase superfamily domain AE940_RS10050 PF03099 Biotin/lipoate A/B protein ligase family AE940_RS10055 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AE940_RS10055 PF01565 FAD binding domain AE940_RS10065 PF01370 NAD dependent epimerase/dehydratase family AE940_RS10070 PF00155 Aminotransferase class I and II AE940_RS10140 PF09820 Predicted AAA-ATPase AE940_RS10140 PF08011 PD-(D/E)XK nuclease superfamily AE940_RS10150 PF00210 Ferritin-like domain AE940_RS10155 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AE940_RS10155 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AE940_RS10160 PF01842 ACT domain AE940_RS10160 PF00696 Amino acid kinase family AE940_RS10165 PF00005 ABC transporter AE940_RS10170 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AE940_RS10170 PF01502 Phosphoribosyl-AMP cyclohydrolase AE940_RS10175 PF00977 Histidine biosynthesis protein AE940_RS10180 PF00977 Histidine biosynthesis protein AE940_RS10185 PF00117 Glutamine amidotransferase class-I AE940_RS10240 PF14310 Fibronectin type III-like domain AE940_RS10240 PF01915 Glycosyl hydrolase family 3 C-terminal domain AE940_RS10240 PF00933 Glycosyl hydrolase family 3 N terminal domain AE940_RS10245 PF01208 Uroporphyrinogen decarboxylase (URO-D) AE940_RS10255 PF02607 B12 binding domain AE940_RS10255 PF02310 B12 binding domain AE940_RS10265 PF00933 Glycosyl hydrolase family 3 N terminal domain AE940_RS10265 PF14310 Fibronectin type III-like domain AE940_RS10265 PF01915 Glycosyl hydrolase family 3 C-terminal domain AE940_RS10270 PF14322 Starch-binding associating with outer membrane AE940_RS10270 PF07980 SusD family AE940_RS10275 PF00593 TonB dependent receptor AE940_RS10275 PF07715 TonB-dependent Receptor Plug Domain AE940_RS10295 PF01965 DJ-1/PfpI family AE940_RS10300 PF00293 NUDIX domain AE940_RS10305 PF07728 AAA domain (dynein-related subfamily) AE940_RS10305 PF12102 Domain of unknown function (DUF3578) AE940_RS10320 PF05971 RNA methyltransferase AE940_RS10350 PF11756 Nitrous oxide-stimulated promoter AE940_RS10360 PF02386 Cation transport protein AE940_RS10365 PF12833 Helix-turn-helix domain AE940_RS10365 PF02311 AraC-like ligand binding domain AE940_RS10370 PF07690 Major Facilitator Superfamily AE940_RS10375 PF00106 short chain dehydrogenase AE940_RS10380 PF02311 AraC-like ligand binding domain AE940_RS10380 PF12833 Helix-turn-helix domain AE940_RS10395 PF01370 NAD dependent epimerase/dehydratase family AE940_RS10395 PF08338 Domain of unknown function (DUF1731) AE940_RS10400 PF01183 Glycosyl hydrolases family 25 AE940_RS10410 PF00365 Phosphofructokinase AE940_RS10425 PF07980 SusD family AE940_RS10425 PF14322 Starch-binding associating with outer membrane AE940_RS10430 PF00593 TonB dependent receptor AE940_RS10430 PF07715 TonB-dependent Receptor Plug Domain AE940_RS10450 PF02321 Outer membrane efflux protein AE940_RS10455 PF00873 AcrB/AcrD/AcrF family AE940_RS10460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AE940_RS10465 PF00027 Cyclic nucleotide-binding domain AE940_RS10465 PF01734 Patatin-like phospholipase AE940_RS10480 PF00795 Carbon-nitrogen hydrolase AE940_RS10485 PF01979 Amidohydrolase family AE940_RS10490 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AE940_RS10490 PF02585 GlcNAc-PI de-N-acetylase AE940_RS10495 PF13350 Tyrosine phosphatase family AE940_RS10530 PF04055 Radical SAM superfamily AE940_RS10530 PF11842 Domain of unknown function (DUF3362) AE940_RS10530 PF08497 Radical SAM N-terminal AE940_RS10535 PF00271 Helicase conserved C-terminal domain AE940_RS10535 PF17757 UvrB interaction domain AE940_RS10535 PF02559 CarD-like/TRCF domain AE940_RS10535 PF00270 DEAD/DEAH box helicase AE940_RS10535 PF03461 TRCF domain AE940_RS10540 PF00535 Glycosyl transferase family 2 AE940_RS10545 PF01979 Amidohydrolase family AE940_RS10555 PF00809 Pterin binding enzyme AE940_RS10555 PF02310 B12 binding domain AE940_RS10555 PF02574 Homocysteine S-methyltransferase AE940_RS10555 PF02607 B12 binding domain AE940_RS10555 PF02965 Vitamin B12 dependent methionine synthase, activation domain AE940_RS10610 PF00149 Calcineurin-like phosphoesterase AE940_RS10610 PF10518 TAT (twin-arginine translocation) pathway signal sequence AE940_RS10615 PF00005 ABC transporter AE940_RS10615 PF00664 ABC transporter transmembrane region AE940_RS10620 PF00005 ABC transporter AE940_RS10620 PF00664 ABC transporter transmembrane region AE940_RS10635 PF00149 Calcineurin-like phosphoesterase AE940_RS10635 PF12320 Type 5 capsule protein repressor C-terminal domain AE940_RS10655 PF00873 AcrB/AcrD/AcrF family AE940_RS10660 PF13533 Biotin-lipoyl like AE940_RS10670 PF10502 Signal peptidase, peptidase S26 AE940_RS10755 PF04055 Radical SAM superfamily AE940_RS10755 PF13186 Iron-sulfur cluster-binding domain AE940_RS10760 PF10459 Peptidase S46 AE940_RS10765 PF10459 Peptidase S46 AE940_RS10785 PF00085 Thioredoxin AE940_RS10790 PF00085 Thioredoxin AE940_RS10800 PF02915 Rubrerythrin AE940_RS10810 PF05656 Protein of unknown function (DUF805) AE940_RS10815 PF01432 Peptidase family M3 AE940_RS10820 PF02540 NAD synthase AE940_RS10820 PF00795 Carbon-nitrogen hydrolase AE940_RS10830 PF00593 TonB dependent receptor AE940_RS10830 PF07715 TonB-dependent Receptor Plug Domain AE940_RS10845 PF00475 Imidazoleglycerol-phosphate dehydratase AE940_RS10850 PF00155 Aminotransferase class I and II AE940_RS10855 PF00815 Histidinol dehydrogenase AE940_RS10860 PF01634 ATP phosphoribosyltransferase AE940_RS10860 PF08029 HisG, C-terminal domain AE940_RS10870 PF17954 Quercetinase C-terminal cupin domain AE940_RS10870 PF02678 Pirin AE940_RS10875 PF11412 Disulphide bond corrector protein DsbC AE940_RS10875 PF02683 Cytochrome C biogenesis protein transmembrane region AE940_RS10885 PF00485 Phosphoribulokinase / Uridine kinase family AE940_RS10890 PF00497 Bacterial extracellular solute-binding proteins, family 3 AE940_RS10890 PF01464 Transglycosylase SLT domain AE940_RS10895 PF00474 Sodium:solute symporter family AE940_RS10905 PF02607 B12 binding domain AE940_RS10905 PF02965 Vitamin B12 dependent methionine synthase, activation domain AE940_RS10905 PF02574 Homocysteine S-methyltransferase AE940_RS10905 PF00809 Pterin binding enzyme AE940_RS10905 PF02310 B12 binding domain AE940_RS10910 PF01668 SmpB protein AE940_RS10945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AE940_RS10945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AE940_RS10950 PF00128 Alpha amylase, catalytic domain AE940_RS10950 PF09154 Domain of unknown function (DUF1939) AE940_RS10955 PF03631 Virulence factor BrkB AE940_RS10970 PF07497 Rho termination factor, RNA-binding domain AE940_RS10970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AE940_RS10975 PF18698 Histidine kinase sensor domain AE940_RS10975 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS10975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS10975 PF00672 HAMP domain AE940_RS10980 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS10980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS10980 PF00989 PAS fold AE940_RS10985 PF01554 MatE AE940_RS10990 PF02978 Signal peptide binding domain AE940_RS10990 PF02881 SRP54-type protein, helical bundle domain AE940_RS10990 PF00448 SRP54-type protein, GTPase domain AE940_RS11000 PF00578 AhpC/TSA family AE940_RS11005 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AE940_RS11005 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AE940_RS11010 PF08534 Redoxin AE940_RS11035 PF00005 ABC transporter AE940_RS11070 PF12169 DNA polymerase III subunits gamma and tau domain III AE940_RS11110 PF07687 Peptidase dimerisation domain AE940_RS11110 PF01546 Peptidase family M20/M25/M40 AE940_RS11120 PF00924 Mechanosensitive ion channel AE940_RS11125 PF00923 Transaldolase/Fructose-6-phosphate aldolase AE940_RS11135 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AE940_RS11135 PF00703 Glycosyl hydrolases family 2 AE940_RS11135 PF16353 Domain of unknown function(DUF4981) AE940_RS11135 PF02929 Beta galactosidase small chain AE940_RS11135 PF02837 Glycosyl hydrolases family 2, sugar binding domain AE940_RS11140 PF07691 PA14 domain AE940_RS11140 PF00728 Glycosyl hydrolase family 20, catalytic domain AE940_RS11140 PF02838 Glycosyl hydrolase family 20, domain 2 AE940_RS11145 PF16347 Domain of unknown function (DUF4976) AE940_RS11145 PF00884 Sulfatase AE940_RS11150 PF00884 Sulfatase AE940_RS11150 PF16385 Domain of unknown function AE940_RS11155 PF02838 Glycosyl hydrolase family 20, domain 2 AE940_RS11155 PF00728 Glycosyl hydrolase family 20, catalytic domain AE940_RS11155 PF07691 PA14 domain AE940_RS11160 PF07495 Y_Y_Y domain AE940_RS11160 PF00072 Response regulator receiver domain AE940_RS11160 PF12833 Helix-turn-helix domain AE940_RS11160 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS11160 PF07494 Two component regulator propeller AE940_RS11160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS11165 PF01791 DeoC/LacD family aldolase AE940_RS11170 PF00300 Histidine phosphatase superfamily (branch 1) AE940_RS11180 PF00005 ABC transporter AE940_RS11185 PF00884 Sulfatase AE940_RS11185 PF16385 Domain of unknown function AE940_RS11190 PF00728 Glycosyl hydrolase family 20, catalytic domain AE940_RS11190 PF02838 Glycosyl hydrolase family 20, domain 2 AE940_RS11190 PF07691 PA14 domain AE940_RS11200 PF07715 TonB-dependent Receptor Plug Domain AE940_RS11200 PF00593 TonB dependent receptor AE940_RS11210 PF08281 Sigma-70, region 4 AE940_RS11210 PF04542 Sigma-70 region 2 AE940_RS11215 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AE940_RS11215 PF03714 Bacterial pullanase-associated domain AE940_RS11215 PF00128 Alpha amylase, catalytic domain AE940_RS11220 PF02075 Crossover junction endodeoxyribonuclease RuvC AE940_RS11240 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AE940_RS11240 PF01409 tRNA synthetases class II core domain (F) AE940_RS11250 PF00633 Helix-hairpin-helix motif AE940_RS11250 PF00730 HhH-GPD superfamily base excision DNA repair protein AE940_RS11255 PF00162 Phosphoglycerate kinase AE940_RS11270 PF04235 Protein of unknown function (DUF418) AE940_RS11285 PF00722 Glycosyl hydrolases family 16 AE940_RS11285 PF02018 Carbohydrate binding domain AE940_RS11290 PF00550 Phosphopantetheine attachment site AE940_RS11290 PF13193 AMP-binding enzyme C-terminal domain AE940_RS11290 PF00668 Condensation domain AE940_RS11290 PF00501 AMP-binding enzyme AE940_RS11300 PF03062 MBOAT, membrane-bound O-acyltransferase family AE940_RS11315 PF02545 Maf-like protein AE940_RS11335 PF00881 Nitroreductase family AE940_RS11340 PF00484 Carbonic anhydrase AE940_RS11355 PF01039 Carboxyl transferase domain AE940_RS11365 PF00364 Biotin-requiring enzyme AE940_RS11365 PF00682 HMGL-like AE940_RS11365 PF02436 Conserved carboxylase domain AE940_RS11370 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AE940_RS11385 PF00128 Alpha amylase, catalytic domain AE940_RS11385 PF10438 Cyclo-malto-dextrinase C-terminal domain AE940_RS11385 PF09087 Cyclomaltodextrinase, N-terminal AE940_RS11395 PF13533 Biotin-lipoyl like AE940_RS11405 PF01116 Fructose-bisphosphate aldolase class-II AE940_RS11415 PF01197 Ribosomal protein L31 AE940_RS11430 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AE940_RS11430 PF00128 Alpha amylase, catalytic domain AE940_RS11440 PF07980 SusD family AE940_RS11445 PF07715 TonB-dependent Receptor Plug Domain AE940_RS11445 PF00593 TonB dependent receptor AE940_RS11450 PF00356 Bacterial regulatory proteins, lacI family AE940_RS11460 PF03632 Glycosyl hydrolase family 65 central catalytic domain AE940_RS11460 PF03636 Glycosyl hydrolase family 65, N-terminal domain AE940_RS11460 PF03633 Glycosyl hydrolase family 65, C-terminal domain AE940_RS11465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AE940_RS11470 PF00873 AcrB/AcrD/AcrF family AE940_RS11485 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AE940_RS11485 PF02769 AIR synthase related protein, C-terminal domain AE940_RS11485 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AE940_RS11490 PF12833 Helix-turn-helix domain AE940_RS11490 PF07494 Two component regulator propeller AE940_RS11490 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS11490 PF00072 Response regulator receiver domain AE940_RS11490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS11490 PF07495 Y_Y_Y domain AE940_RS11495 PF02417 Chromate transporter AE940_RS11505 PF02638 Glycosyl hydrolase-like 10 AE940_RS11510 PF17755 UvrA DNA-binding domain AE940_RS11510 PF17760 UvrA interaction domain AE940_RS11525 PF02554 Carbon starvation protein CstA AE940_RS11530 PF02638 Glycosyl hydrolase-like 10 AE940_RS11535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS11535 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS11535 PF09456 RcsC Alpha-Beta-Loop (ABL) AE940_RS11535 PF00072 Response regulator receiver domain AE940_RS11555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AE940_RS11555 PF10371 Domain of unknown function AE940_RS11555 PF12838 4Fe-4S dicluster domain AE940_RS11555 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AE940_RS11555 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AE940_RS11555 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AE940_RS11565 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AE940_RS11570 PF00528 Binding-protein-dependent transport system inner membrane component AE940_RS11575 PF00571 CBS domain AE940_RS11575 PF00005 ABC transporter AE940_RS11585 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS11585 PF07495 Y_Y_Y domain AE940_RS11585 PF00072 Response regulator receiver domain AE940_RS11585 PF12833 Helix-turn-helix domain AE940_RS11585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS11585 PF07494 Two component regulator propeller AE940_RS11590 PF00294 pfkB family carbohydrate kinase AE940_RS11590 PF01467 Cytidylyltransferase-like AE940_RS11600 PF08244 Glycosyl hydrolases family 32 C terminal AE940_RS11600 PF00251 Glycosyl hydrolases family 32 N-terminal domain AE940_RS11625 PF07690 Major Facilitator Superfamily AE940_RS11640 PF01734 Patatin-like phospholipase AE940_RS11645 PF00999 Sodium/hydrogen exchanger family AE940_RS11670 PF04170 NlpE N-terminal domain AE940_RS11680 PF00873 AcrB/AcrD/AcrF family AE940_RS11685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AE940_RS11685 PF00529 HlyD membrane-fusion protein of T1SS AE940_RS11690 PF02311 AraC-like ligand binding domain AE940_RS11690 PF12833 Helix-turn-helix domain AE940_RS11700 PF04397 LytTr DNA-binding domain AE940_RS11700 PF00072 Response regulator receiver domain AE940_RS11715 PF07715 TonB-dependent Receptor Plug Domain AE940_RS11715 PF00593 TonB dependent receptor AE940_RS11720 PF14322 Starch-binding associating with outer membrane AE940_RS11720 PF07980 SusD family AE940_RS11730 PF01012 Electron transfer flavoprotein domain AE940_RS11735 PF00766 Electron transfer flavoprotein FAD-binding domain AE940_RS11735 PF01012 Electron transfer flavoprotein domain AE940_RS11740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AE940_RS11740 PF02770 Acyl-CoA dehydrogenase, middle domain AE940_RS11740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AE940_RS11745 PF00703 Glycosyl hydrolases family 2 AE940_RS11745 PF16353 Domain of unknown function(DUF4981) AE940_RS11745 PF02929 Beta galactosidase small chain AE940_RS11745 PF02837 Glycosyl hydrolases family 2, sugar binding domain AE940_RS11745 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AE940_RS11755 PF00684 DnaJ central domain AE940_RS11755 PF01556 DnaJ C terminal domain AE940_RS11755 PF00226 DnaJ domain AE940_RS11760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS11760 PF00072 Response regulator receiver domain AE940_RS11760 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS11760 PF09456 RcsC Alpha-Beta-Loop (ABL) AE940_RS11765 PF08019 Phosphoethanolamine transferase EptA/EptB AE940_RS11765 PF00884 Sulfatase AE940_RS11785 PF01212 Beta-eliminating lyase AE940_RS11795 PF04542 Sigma-70 region 2 AE940_RS11795 PF08281 Sigma-70, region 4 AE940_RS11810 PF00205 Thiamine pyrophosphate enzyme, central domain AE940_RS11810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AE940_RS11810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AE940_RS11835 PF00118 TCP-1/cpn60 chaperonin family AE940_RS11840 PF00166 Chaperonin 10 Kd subunit AE940_RS11880 PF03976 Polyphosphate kinase 2 (PPK2) AE940_RS11915 PF17678 Glycosyl hydrolase family 92 N-terminal domain AE940_RS11915 PF07971 Glycosyl hydrolase family 92 AE940_RS11920 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AE940_RS11920 PF00326 Prolyl oligopeptidase family AE940_RS11925 PF03129 Anticodon binding domain AE940_RS11925 PF13393 Histidyl-tRNA synthetase AE940_RS11950 PF00709 Adenylosuccinate synthetase AE940_RS11980 PF09382 RQC domain AE940_RS11980 PF16124 RecQ zinc-binding AE940_RS11980 PF00570 HRDC domain AE940_RS11980 PF00270 DEAD/DEAH box helicase AE940_RS11980 PF00271 Helicase conserved C-terminal domain AE940_RS11990 PF00291 Pyridoxal-phosphate dependent enzyme AE940_RS12000 PF01569 PAP2 superfamily AE940_RS12020 PF14322 Starch-binding associating with outer membrane AE940_RS12020 PF07980 SusD family AE940_RS12025 PF00593 TonB dependent receptor AE940_RS12025 PF07715 TonB-dependent Receptor Plug Domain AE940_RS12030 PF01370 NAD dependent epimerase/dehydratase family AE940_RS12045 PF00535 Glycosyl transferase family 2 AE940_RS12050 PF00180 Isocitrate/isopropylmalate dehydrogenase AE940_RS12055 PF00682 HMGL-like AE940_RS12055 PF08502 LeuA allosteric (dimerisation) domain AE940_RS12060 PF00694 Aconitase C-terminal domain AE940_RS12065 PF00330 Aconitase family (aconitate hydratase) AE940_RS12070 PF08502 LeuA allosteric (dimerisation) domain AE940_RS12070 PF00682 HMGL-like AE940_RS12120 PF01343 Peptidase family S49 AE940_RS12125 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AE940_RS12130 PF01048 Phosphorylase superfamily AE940_RS12135 PF00586 AIR synthase related protein, N-terminal domain AE940_RS12135 PF02769 AIR synthase related protein, C-terminal domain AE940_RS12210 PF00248 Aldo/keto reductase family AE940_RS12240 PF13749 Putative ATP-dependent DNA helicase recG C-terminal AE940_RS12240 PF00270 DEAD/DEAH box helicase AE940_RS12240 PF17191 RecG wedge domain AE940_RS12250 PF13419 Haloacid dehalogenase-like hydrolase AE940_RS12255 PF12464 Maltose acetyltransferase AE940_RS12255 PF14602 Hexapeptide repeat of succinyl-transferase AE940_RS12265 PF02311 AraC-like ligand binding domain AE940_RS12265 PF12833 Helix-turn-helix domain AE940_RS12270 PF00072 Response regulator receiver domain AE940_RS12270 PF07495 Y_Y_Y domain AE940_RS12270 PF07494 Two component regulator propeller AE940_RS12270 PF12833 Helix-turn-helix domain AE940_RS12270 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS12270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS12275 PF10566 Glycoside hydrolase 97 AE940_RS12275 PF14508 Glycosyl-hydrolase 97 N-terminal AE940_RS12275 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AE940_RS12295 PF07980 SusD family AE940_RS12295 PF14322 Starch-binding associating with outer membrane AE940_RS12300 PF07715 TonB-dependent Receptor Plug Domain AE940_RS12300 PF00593 TonB dependent receptor AE940_RS12325 PF03167 Uracil DNA glycosylase superfamily AE940_RS12330 PF12833 Helix-turn-helix domain AE940_RS12330 PF02311 AraC-like ligand binding domain AE940_RS12345 PF01814 Hemerythrin HHE cation binding domain AE940_RS12345 PF04405 Domain of Unknown function (DUF542) AE940_RS12350 PF01575 MaoC like domain AE940_RS12425 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AE940_RS12425 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AE940_RS12435 PF02254 TrkA-N domain AE940_RS12435 PF00999 Sodium/hydrogen exchanger family AE940_RS12440 PF00289 Biotin carboxylase, N-terminal domain AE940_RS12440 PF02785 Biotin carboxylase C-terminal domain AE940_RS12440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AE940_RS12445 PF00364 Biotin-requiring enzyme AE940_RS12445 PF00682 HMGL-like AE940_RS12445 PF02436 Conserved carboxylase domain AE940_RS12450 PF01039 Carboxyl transferase domain AE940_RS12455 PF00857 Isochorismatase family AE940_RS12460 PF00144 Beta-lactamase AE940_RS12465 PF00571 CBS domain AE940_RS12465 PF00478 IMP dehydrogenase / GMP reductase domain AE940_RS12480 PF12852 Cupin AE940_RS12480 PF12833 Helix-turn-helix domain AE940_RS12485 PF00529 HlyD membrane-fusion protein of T1SS AE940_RS12485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AE940_RS12490 PF00873 AcrB/AcrD/AcrF family AE940_RS12495 PF02321 Outer membrane efflux protein AE940_RS12500 PF01053 Cys/Met metabolism PLP-dependent enzyme AE940_RS12575 PF00873 AcrB/AcrD/AcrF family AE940_RS12585 PF01476 LysM domain AE940_RS12585 PF01464 Transglycosylase SLT domain AE940_RS12590 PF00027 Cyclic nucleotide-binding domain AE940_RS12590 PF00520 Ion transport protein AE940_RS12595 PF13086 AAA domain AE940_RS12595 PF13195 Protein of unknown function (DUF4011) AE940_RS12595 PF13195 Protein of unknown function (DUF4011) AE940_RS12595 PF13086 AAA domain AE940_RS12595 PF13087 AAA domain AE940_RS12595 PF13087 AAA domain AE940_RS12605 PF02308 MgtC family AE940_RS12625 PF01625 Peptide methionine sulfoxide reductase AE940_RS12625 PF01641 SelR domain AE940_RS12640 PF01235 Sodium:alanine symporter family AE940_RS12650 PF04055 Radical SAM superfamily AE940_RS12650 PF12544 Lysine-2,3-aminomutase AE940_RS12655 PF00860 Permease family AE940_RS12670 PF03960 ArsC family AE940_RS12680 PF07715 TonB-dependent Receptor Plug Domain AE940_RS12680 PF00593 TonB dependent receptor AE940_RS12690 PF12450 von Willebrand factor AE940_RS12690 PF00092 von Willebrand factor type A domain AE940_RS12690 PF12034 Domain of unknown function (DUF3520) AE940_RS12700 PF08543 Phosphomethylpyrimidine kinase AE940_RS12710 PF13183 4Fe-4S dicluster domain AE940_RS12710 PF11870 Domain of unknown function (DUF3390) AE940_RS12710 PF02589 LUD domain AE940_RS12715 PF02754 Cysteine-rich domain AE940_RS12720 PF04055 Radical SAM superfamily AE940_RS12730 PF04304 Protein of unknown function (DUF454) AE940_RS12735 PF01048 Phosphorylase superfamily AE940_RS12750 PF03932 CutC family AE940_RS12755 PF12072 Domain of unknown function (DUF3552) AE940_RS12755 PF01966 HD domain AE940_RS12755 PF00013 KH domain AE940_RS12770 PF00390 Malic enzyme, N-terminal domain AE940_RS12770 PF03949 Malic enzyme, NAD binding domain AE940_RS12770 PF01515 Phosphate acetyl/butaryl transferase AE940_RS12775 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AE940_RS12775 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AE940_RS12790 PF07715 TonB-dependent Receptor Plug Domain AE940_RS12790 PF00593 TonB dependent receptor AE940_RS12820 PF01555 DNA methylase AE940_RS12910 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AE940_RS12910 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AE940_RS12915 PF01321 Creatinase/Prolidase N-terminal domain AE940_RS12915 PF00557 Metallopeptidase family M24 AE940_RS12930 PF02272 DHHA1 domain AE940_RS12930 PF01368 DHH family AE940_RS12930 PF01743 Poly A polymerase head domain AE940_RS12930 PF00571 CBS domain AE940_RS12955 PF00675 Insulinase (Peptidase family M16) AE940_RS12955 PF05193 Peptidase M16 inactive domain AE940_RS12965 PF00313 'Cold-shock' DNA-binding domain AE940_RS12975 PF01370 NAD dependent epimerase/dehydratase family AE940_RS12980 PF00535 Glycosyl transferase family 2 AE940_RS12985 PF00534 Glycosyl transferases group 1 AE940_RS12985 PF13439 Glycosyltransferase Family 4 AE940_RS12995 PF00535 Glycosyl transferase family 2 AE940_RS12995 PF01501 Glycosyl transferase family 8 AE940_RS13010 PF01943 Polysaccharide biosynthesis protein AE940_RS13010 PF14667 Polysaccharide biosynthesis C-terminal domain AE940_RS13020 PF01370 NAD dependent epimerase/dehydratase family AE940_RS13025 PF16363 GDP-mannose 4,6 dehydratase AE940_RS13030 PF00483 Nucleotidyl transferase AE940_RS13035 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AE940_RS13040 PF00953 Glycosyl transferase family 4 AE940_RS13080 PF00216 Bacterial DNA-binding protein AE940_RS13085 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AE940_RS13115 PF01330 RuvA N terminal domain AE940_RS13115 PF07499 RuvA, C-terminal domain AE940_RS13120 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain AE940_RS13120 PF01118 Semialdehyde dehydrogenase, NAD binding domain AE940_RS13125 PF03006 Haemolysin-III related AE940_RS13130 PF03477 ATP cone domain AE940_RS13130 PF13597 Anaerobic ribonucleoside-triphosphate reductase AE940_RS13140 PF07690 Major Facilitator Superfamily AE940_RS13145 PF00266 Aminotransferase class-V AE940_RS13150 PF13419 Haloacid dehalogenase-like hydrolase AE940_RS13160 PF17820 PDZ domain AE940_RS13160 PF02163 Peptidase family M50 AE940_RS13165 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AE940_RS13165 PF13288 DXP reductoisomerase C-terminal domain AE940_RS13165 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AE940_RS13175 PF01782 RimM N-terminal domain AE940_RS13180 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AE940_RS13190 PF00814 Glycoprotease family AE940_RS13205 PF00625 Guanylate kinase AE940_RS13210 PF01467 Cytidylyltransferase-like AE940_RS13215 PF00149 Calcineurin-like phosphoesterase AE940_RS13215 PF10518 TAT (twin-arginine translocation) pathway signal sequence AE940_RS13220 PF01040 UbiA prenyltransferase family AE940_RS13225 PF16363 GDP-mannose 4,6 dehydratase AE940_RS13230 PF00483 Nucleotidyl transferase AE940_RS13240 PF13090 Polyphosphate kinase C-terminal domain 2 AE940_RS13240 PF13089 Polyphosphate kinase N-terminal domain AE940_RS13240 PF02503 Polyphosphate kinase middle domain AE940_RS13240 PF17941 Polyphosphate kinase C-terminal domain 1 AE940_RS13250 PF00158 Sigma-54 interaction domain AE940_RS13250 PF00072 Response regulator receiver domain AE940_RS13250 PF02954 Bacterial regulatory protein, Fis family AE940_RS13255 PF12848 ABC transporter AE940_RS13255 PF16326 ABC transporter C-terminal domain AE940_RS13255 PF00005 ABC transporter AE940_RS13270 PF00873 AcrB/AcrD/AcrF family AE940_RS13290 PF01189 16S rRNA methyltransferase RsmB/F AE940_RS13290 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AE940_RS13290 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AE940_RS13305 PF08281 Sigma-70, region 4 AE940_RS13305 PF04542 Sigma-70 region 2 AE940_RS13315 PF13091 PLD-like domain AE940_RS13315 PF13396 Phospholipase_D-nuclease N-terminal AE940_RS13320 PF00303 Thymidylate synthase AE940_RS13325 PF00186 Dihydrofolate reductase AE940_RS13330 PF01037 Lrp/AsnC ligand binding domain AE940_RS13330 PF13404 AsnC-type helix-turn-helix domain AE940_RS13355 PF01618 MotA/TolQ/ExbB proton channel family AE940_RS13365 PF01026 TatD related DNase AE940_RS13375 PF00348 Polyprenyl synthetase AE940_RS13380 PF03544 Gram-negative bacterial TonB protein C-terminal AE940_RS13385 PF02224 Cytidylate kinase AE940_RS13390 PF02401 LytB protein AE940_RS13395 PF00365 Phosphofructokinase AE940_RS13400 PF00106 short chain dehydrogenase AE940_RS13405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AE940_RS13415 PF00285 Citrate synthase, C-terminal domain AE940_RS13420 PF00180 Isocitrate/isopropylmalate dehydrogenase AE940_RS13425 PF00694 Aconitase C-terminal domain AE940_RS13425 PF00330 Aconitase family (aconitate hydratase) AE940_RS13430 PF13087 AAA domain AE940_RS13430 PF13195 Protein of unknown function (DUF4011) AE940_RS13430 PF13086 AAA domain AE940_RS13440 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AE940_RS13440 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AE940_RS13460 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AE940_RS13460 PF00205 Thiamine pyrophosphate enzyme, central domain AE940_RS13460 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AE940_RS13465 PF00920 Dehydratase family AE940_RS13490 PF00223 Photosystem I psaA/psaB protein AE940_RS13490 PF00691 OmpA family AE940_RS13500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AE940_RS13510 PF03313 Serine dehydratase alpha chain AE940_RS13540 PF01676 Metalloenzyme superfamily AE940_RS13550 PF07980 SusD family AE940_RS13550 PF14322 Starch-binding associating with outer membrane AE940_RS13555 PF00593 TonB dependent receptor AE940_RS13555 PF07715 TonB-dependent Receptor Plug Domain AE940_RS13570 PF07980 SusD family AE940_RS13570 PF14322 Starch-binding associating with outer membrane AE940_RS13575 PF07715 TonB-dependent Receptor Plug Domain AE940_RS13575 PF00593 TonB dependent receptor AE940_RS13580 PF00963 Cohesin domain AE940_RS13580 PF00754 F5/8 type C domain AE940_RS13580 PF00041 Fibronectin type III domain AE940_RS13580 PF02838 Glycosyl hydrolase family 20, domain 2 AE940_RS13580 PF07555 beta-N-acetylglucosaminidase AE940_RS13590 PF00593 TonB dependent receptor AE940_RS13590 PF07715 TonB-dependent Receptor Plug Domain AE940_RS13605 PF01264 Chorismate synthase AE940_RS13610 PF01546 Peptidase family M20/M25/M40 AE940_RS13610 PF07687 Peptidase dimerisation domain AE940_RS13625 PF00171 Aldehyde dehydrogenase family AE940_RS13625 PF01619 Proline dehydrogenase AE940_RS13625 PF14850 DNA-binding domain of Proline dehydrogenase AE940_RS13625 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AE940_RS13635 PF01751 Toprim domain AE940_RS13635 PF01131 DNA topoisomerase AE940_RS13645 PF02310 B12 binding domain AE940_RS13645 PF01642 Methylmalonyl-CoA mutase AE940_RS13650 PF01642 Methylmalonyl-CoA mutase AE940_RS13655 PF06826 Predicted Permease Membrane Region AE940_RS13655 PF02080 TrkA-C domain AE940_RS13685 PF01554 MatE AE940_RS13690 PF14229 Domain of unknown function (DUF4332) AE940_RS13690 PF00152 tRNA synthetases class II (D, K and N) AE940_RS13690 PF01336 OB-fold nucleic acid binding domain AE940_RS13695 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AE940_RS13695 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AE940_RS13700 PF00342 Phosphoglucose isomerase AE940_RS13710 PF13419 Haloacid dehalogenase-like hydrolase AE940_RS13720 PF03590 Aspartate-ammonia ligase AE940_RS13725 PF03167 Uracil DNA glycosylase superfamily AE940_RS13740 PF02838 Glycosyl hydrolase family 20, domain 2 AE940_RS13740 PF07691 PA14 domain AE940_RS13740 PF00728 Glycosyl hydrolase family 20, catalytic domain AE940_RS13755 PF11741 AMIN domain AE940_RS13755 PF01520 N-acetylmuramoyl-L-alanine amidase AE940_RS13765 PF00308 Bacterial dnaA protein AE940_RS13765 PF08299 Bacterial dnaA protein helix-turn-helix AE940_RS13765 PF11638 DnaA N-terminal domain AE940_RS13775 PF00317 Ribonucleotide reductase, all-alpha domain AE940_RS13775 PF03477 ATP cone domain AE940_RS13775 PF02867 Ribonucleotide reductase, barrel domain AE940_RS13780 PF02446 4-alpha-glucanotransferase AE940_RS13790 PF02152 Dihydroneopterin aldolase AE940_RS13795 PF08534 Redoxin AE940_RS13800 PF02142 MGS-like domain AE940_RS13815 PF00919 Uncharacterized protein family UPF0004 AE940_RS13815 PF04055 Radical SAM superfamily AE940_RS13820 PF00501 AMP-binding enzyme AE940_RS13830 PF01281 Ribosomal protein L9, N-terminal domain AE940_RS13830 PF03948 Ribosomal protein L9, C-terminal domain AE940_RS13835 PF01084 Ribosomal protein S18 AE940_RS13840 PF01250 Ribosomal protein S6 AE940_RS13850 PF00486 Transcriptional regulatory protein, C terminal AE940_RS13850 PF00072 Response regulator receiver domain AE940_RS13855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS13855 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS13860 PF03144 Elongation factor Tu domain 2 AE940_RS13860 PF00679 Elongation factor G C-terminus AE940_RS13860 PF14492 Elongation Factor G, domain II AE940_RS13860 PF03764 Elongation factor G, domain IV AE940_RS13860 PF00009 Elongation factor Tu GTP binding domain AE940_RS13870 PF06969 HemN C-terminal domain AE940_RS13870 PF04055 Radical SAM superfamily AE940_RS13890 PF07715 TonB-dependent Receptor Plug Domain AE940_RS13890 PF00593 TonB dependent receptor AE940_RS13905 PF03956 Lysine exporter LysO AE940_RS13925 PF00488 MutS domain V AE940_RS13925 PF01713 Smr domain AE940_RS13930 PF02547 Queuosine biosynthesis protein AE940_RS13935 PF00293 NUDIX domain AE940_RS13940 PF00255 Glutathione peroxidase AE940_RS13950 PF00873 AcrB/AcrD/AcrF family AE940_RS13960 PF07694 5TMR of 5TMR-LYT AE940_RS13960 PF06580 Histidine kinase AE940_RS13960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS13965 PF04397 LytTr DNA-binding domain AE940_RS13965 PF00072 Response regulator receiver domain AE940_RS13985 PF01926 50S ribosome-binding GTPase AE940_RS13985 PF10396 GTP-binding protein TrmE N-terminus AE940_RS13985 PF12631 MnmE helical domain AE940_RS13995 PF01301 Glycosyl hydrolases family 35 AE940_RS14000 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AE940_RS14000 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AE940_RS14000 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AE940_RS14000 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AE940_RS14010 PF01368 DHH family AE940_RS14010 PF02272 DHHA1 domain AE940_RS14015 PF03772 Competence protein AE940_RS14020 PF00834 Ribulose-phosphate 3 epimerase family AE940_RS14025 PF00551 Formyl transferase AE940_RS14025 PF02911 Formyl transferase, C-terminal domain AE940_RS14035 PF01300 Telomere recombination AE940_RS14060 PF02397 Bacterial sugar transferase AE940_RS14065 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AE940_RS14090 PF00534 Glycosyl transferases group 1 AE940_RS14100 PF00535 Glycosyl transferase family 2 AE940_RS14105 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AE940_RS14105 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AE940_RS14105 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AE940_RS14110 PF01370 NAD dependent epimerase/dehydratase family AE940_RS14115 PF00534 Glycosyl transferases group 1 AE940_RS14115 PF13439 Glycosyltransferase Family 4 AE940_RS14120 PF01943 Polysaccharide biosynthesis protein AE940_RS14145 PF03352 Methyladenine glycosylase AE940_RS14150 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AE940_RS14150 PF17768 RecJ OB domain AE940_RS14150 PF02272 DHHA1 domain AE940_RS14150 PF01368 DHH family AE940_RS14155 PF00270 DEAD/DEAH box helicase AE940_RS14155 PF00271 Helicase conserved C-terminal domain AE940_RS14165 PF07690 Major Facilitator Superfamily AE940_RS14170 PF13859 BNR repeat-like domain AE940_RS14170 PF14873 N-terminal domain of BNR-repeat neuraminidase AE940_RS14180 PF07980 SusD family AE940_RS14180 PF14322 Starch-binding associating with outer membrane AE940_RS14185 PF07715 TonB-dependent Receptor Plug Domain AE940_RS14185 PF00593 TonB dependent receptor AE940_RS14190 PF00701 Dihydrodipicolinate synthetase family AE940_RS14195 PF07729 FCD domain AE940_RS14195 PF00392 Bacterial regulatory proteins, gntR family AE940_RS14205 PF00155 Aminotransferase class I and II AE940_RS14210 PF00793 DAHP synthetase I family AE940_RS14210 PF18152 DAHP synthase ferredoxin-like domain AE940_RS14225 PF01807 CHC2 zinc finger AE940_RS14225 PF10410 DnaB-helicase binding domain of primase AE940_RS14225 PF08275 DNA primase catalytic core, N-terminal domain AE940_RS14230 PF00884 Sulfatase AE940_RS14230 PF16347 Domain of unknown function (DUF4976) AE940_RS14235 PF00884 Sulfatase AE940_RS14245 PF07715 TonB-dependent Receptor Plug Domain AE940_RS14245 PF00593 TonB dependent receptor AE940_RS14260 PF01227 GTP cyclohydrolase I AE940_RS14270 PF00121 Triosephosphate isomerase AE940_RS14285 PF01551 Peptidase family M23 AE940_RS14285 PF04225 Opacity-associated protein A LysM-like domain AE940_RS14290 PF00334 Nucleoside diphosphate kinase AE940_RS14295 PF17191 RecG wedge domain AE940_RS14295 PF00270 DEAD/DEAH box helicase AE940_RS14295 PF00271 Helicase conserved C-terminal domain AE940_RS14300 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AE940_RS14305 PF01965 DJ-1/PfpI family AE940_RS14320 PF01618 MotA/TolQ/ExbB proton channel family AE940_RS14325 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AE940_RS14330 PF01513 ATP-NAD kinase AE940_RS14380 PF00593 TonB dependent receptor AE940_RS14380 PF07715 TonB-dependent Receptor Plug Domain AE940_RS14415 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AE940_RS14415 PF00056 lactate/malate dehydrogenase, NAD binding domain AE940_RS14445 PF13533 Biotin-lipoyl like AE940_RS14460 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AE940_RS14460 PF14508 Glycosyl-hydrolase 97 N-terminal AE940_RS14460 PF10566 Glycoside hydrolase 97 AE940_RS14480 PF03544 Gram-negative bacterial TonB protein C-terminal AE940_RS14485 PF00085 Thioredoxin AE940_RS14490 PF01883 Iron-sulfur cluster assembly protein AE940_RS14490 PF10609 NUBPL iron-transfer P-loop NTPase AE940_RS14495 PF02390 Putative methyltransferase AE940_RS14505 PF01063 Amino-transferase class IV AE940_RS14510 PF02609 Exonuclease VII small subunit AE940_RS14515 PF02601 Exonuclease VII, large subunit AE940_RS14515 PF13742 OB-fold nucleic acid binding domain AE940_RS14545 PF02542 YgbB family AE940_RS14550 PF01557 Fumarylacetoacetate (FAA) hydrolase family AE940_RS14555 PF02629 CoA binding domain AE940_RS14555 PF06971 Putative DNA-binding protein N-terminus AE940_RS14565 PF00889 Elongation factor TS AE940_RS14570 PF00318 Ribosomal protein S2 AE940_RS14575 PF00380 Ribosomal protein S9/S16 AE940_RS14580 PF00572 Ribosomal protein L13 AE940_RS14590 PF01336 OB-fold nucleic acid binding domain AE940_RS14590 PF00152 tRNA synthetases class II (D, K and N) AE940_RS14595 PF00849 RNA pseudouridylate synthase AE940_RS14595 PF01479 S4 domain AE940_RS14600 PF08328 Adenylosuccinate lyase C-terminal AE940_RS14600 PF00206 Lyase AE940_RS14605 PF01301 Glycosyl hydrolases family 35 AE940_RS14625 PF14602 Hexapeptide repeat of succinyl-transferase AE940_RS14625 PF12464 Maltose acetyltransferase AE940_RS14630 PF03883 Peroxide stress protein YaaA AE940_RS14635 PF02838 Glycosyl hydrolase family 20, domain 2 AE940_RS14635 PF07555 beta-N-acetylglucosaminidase AE940_RS14660 PF01389 OmpA-like transmembrane domain AE940_RS14660 PF00691 OmpA family AE940_RS14690 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AE940_RS14690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AE940_RS14690 PF02142 MGS-like domain AE940_RS14695 PF00579 tRNA synthetases class I (W and Y) AE940_RS14700 PF01389 OmpA-like transmembrane domain AE940_RS14700 PF00691 OmpA family AE940_RS14710 PF03412 Peptidase C39 family AE940_RS14710 PF00005 ABC transporter AE940_RS14710 PF00664 ABC transporter transmembrane region AE940_RS14725 PF00535 Glycosyl transferase family 2 AE940_RS14725 PF01501 Glycosyl transferase family 8 AE940_RS14750 PF06463 Molybdenum Cofactor Synthesis C AE940_RS14750 PF04055 Radical SAM superfamily AE940_RS14780 PF00534 Glycosyl transferases group 1 AE940_RS14780 PF13439 Glycosyltransferase Family 4 AE940_RS14875 PF08676 MutL C terminal dimerisation domain AE940_RS14875 PF01119 DNA mismatch repair protein, C-terminal domain AE940_RS14905 PF00571 CBS domain AE940_RS14905 PF00478 IMP dehydrogenase / GMP reductase domain AE940_RS14910 PF09382 RQC domain AE940_RS14910 PF00570 HRDC domain AE940_RS14910 PF16124 RecQ zinc-binding AE940_RS14910 PF00270 DEAD/DEAH box helicase AE940_RS14910 PF00271 Helicase conserved C-terminal domain AE940_RS14915 PF06689 ClpX C4-type zinc finger AE940_RS14915 PF07724 AAA domain (Cdc48 subfamily) AE940_RS14915 PF10431 C-terminal, D2-small domain, of ClpB protein AE940_RS14920 PF00574 Clp protease AE940_RS14925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AE940_RS14925 PF05698 Bacterial trigger factor protein (TF) C-terminus AE940_RS14925 PF05697 Bacterial trigger factor protein (TF) AE940_RS14935 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AE940_RS14940 PF00005 ABC transporter AE940_RS14945 PF02405 Permease MlaE AE940_RS14950 PF00005 ABC transporter AE940_RS14955 PF00196 Bacterial regulatory proteins, luxR family AE940_RS14955 PF00072 Response regulator receiver domain AE940_RS14960 PF01926 50S ribosome-binding GTPase AE940_RS14960 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AE940_RS14965 PF01926 50S ribosome-binding GTPase AE940_RS14965 PF07650 KH domain AE940_RS14970 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AE940_RS14970 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AE940_RS15010 PF02219 Methylenetetrahydrofolate reductase AE940_RS15015 PF09115 DNA polymerase III, delta subunit, C terminal AE940_RS15020 PF04468 PSP1 C-terminal conserved region AE940_RS15030 PF01098 Cell cycle protein AE940_RS15035 PF03717 Penicillin-binding Protein dimerisation domain AE940_RS15035 PF00905 Penicillin binding protein transpeptidase domain AE940_RS15045 PF04085 rod shape-determining protein MreC AE940_RS15055 PF02142 MGS-like domain AE940_RS15055 PF01808 AICARFT/IMPCHase bienzyme AE940_RS15060 PF05649 Peptidase family M13 AE940_RS15060 PF01431 Peptidase family M13 AE940_RS15065 PF00005 ABC transporter AE940_RS15065 PF12848 ABC transporter AE940_RS15065 PF16326 ABC transporter C-terminal domain AE940_RS15090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS15090 PF00072 Response regulator receiver domain AE940_RS15090 PF09456 RcsC Alpha-Beta-Loop (ABL) AE940_RS15090 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS15095 PF01554 MatE AE940_RS15100 PF05193 Peptidase M16 inactive domain AE940_RS15100 PF00675 Insulinase (Peptidase family M16) AE940_RS15105 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AE940_RS15110 PF00158 Sigma-54 interaction domain AE940_RS15110 PF00072 Response regulator receiver domain AE940_RS15110 PF02954 Bacterial regulatory protein, Fis family AE940_RS15120 PF00849 RNA pseudouridylate synthase AE940_RS15120 PF01479 S4 domain AE940_RS15130 PF08360 QacR-like protein, C-terminal region AE940_RS15130 PF00440 Bacterial regulatory proteins, tetR family AE940_RS15150 PF00005 ABC transporter AE940_RS15155 PF05139 Erythromycin esterase AE940_RS15175 PF00005 ABC transporter AE940_RS15185 PF12849 PBP superfamily domain AE940_RS15255 PF09827 CRISPR associated protein Cas2 AE940_RS15260 PF01867 CRISPR associated protein Cas1 AE940_RS15275 PF13395 HNH endonuclease AE940_RS15275 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 AE940_RS15275 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 AE940_RS15275 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 AE940_RS15295 PF03062 MBOAT, membrane-bound O-acyltransferase family AE940_RS15315 PF00873 AcrB/AcrD/AcrF family AE940_RS15320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AE940_RS15330 PF00440 Bacterial regulatory proteins, tetR family AE940_RS15335 PF00221 Aromatic amino acid lyase AE940_RS15345 PF01979 Amidohydrolase family AE940_RS15350 PF02971 Formiminotransferase domain AE940_RS15350 PF07837 Formiminotransferase domain, N-terminal subdomain AE940_RS15355 PF17391 Urocanase N-terminal domain AE940_RS15355 PF17392 Urocanase C-terminal domain AE940_RS15355 PF01175 Urocanase Rossmann-like domain AE940_RS15365 PF05190 MutS family domain IV AE940_RS15365 PF05192 MutS domain III AE940_RS15365 PF05188 MutS domain II AE940_RS15365 PF01624 MutS domain I AE940_RS15365 PF00488 MutS domain V AE940_RS15380 PF01196 Ribosomal protein L17 AE940_RS15385 PF01000 RNA polymerase Rpb3/RpoA insert domain AE940_RS15385 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AE940_RS15385 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AE940_RS15390 PF01479 S4 domain AE940_RS15390 PF00163 Ribosomal protein S4/S9 N-terminal domain AE940_RS15395 PF00411 Ribosomal protein S11 AE940_RS15400 PF00416 Ribosomal protein S13/S18 AE940_RS15405 PF01176 Translation initiation factor 1A / IF-1 AE940_RS15410 PF00557 Metallopeptidase family M24 AE940_RS15415 PF00344 SecY translocase AE940_RS15420 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AE940_RS15425 PF00327 Ribosomal protein L30p/L7e AE940_RS15430 PF00333 Ribosomal protein S5, N-terminal domain AE940_RS15430 PF03719 Ribosomal protein S5, C-terminal domain AE940_RS15435 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AE940_RS15440 PF00347 Ribosomal protein L6 AE940_RS15445 PF00410 Ribosomal protein S8 AE940_RS15450 PF00253 Ribosomal protein S14p/S29e AE940_RS15455 PF00673 ribosomal L5P family C-terminus AE940_RS15455 PF00281 Ribosomal protein L5 AE940_RS15460 PF00467 KOW motif AE940_RS15460 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AE940_RS15465 PF00238 Ribosomal protein L14p/L23e AE940_RS15470 PF00366 Ribosomal protein S17 AE940_RS15475 PF00831 Ribosomal L29 protein AE940_RS15480 PF00252 Ribosomal protein L16p/L10e AE940_RS15485 PF00189 Ribosomal protein S3, C-terminal domain AE940_RS15485 PF07650 KH domain AE940_RS15490 PF00237 Ribosomal protein L22p/L17e AE940_RS15495 PF00203 Ribosomal protein S19 AE940_RS15500 PF00181 Ribosomal Proteins L2, RNA binding domain AE940_RS15500 PF03947 Ribosomal Proteins L2, C-terminal domain AE940_RS15505 PF00276 Ribosomal protein L23 AE940_RS15510 PF00573 Ribosomal protein L4/L1 family AE940_RS15515 PF00297 Ribosomal protein L3 AE940_RS15520 PF00338 Ribosomal protein S10p/S20e AE940_RS15525 PF03144 Elongation factor Tu domain 2 AE940_RS15525 PF00009 Elongation factor Tu GTP binding domain AE940_RS15525 PF03764 Elongation factor G, domain IV AE940_RS15525 PF14492 Elongation Factor G, domain II AE940_RS15525 PF00679 Elongation factor G C-terminus AE940_RS15530 PF00177 Ribosomal protein S7p/S5e AE940_RS15535 PF00164 Ribosomal protein S12/S23 AE940_RS15565 PF00623 RNA polymerase Rpb1, domain 2 AE940_RS15565 PF04983 RNA polymerase Rpb1, domain 3 AE940_RS15565 PF05000 RNA polymerase Rpb1, domain 4 AE940_RS15565 PF04997 RNA polymerase Rpb1, domain 1 AE940_RS15565 PF04998 RNA polymerase Rpb1, domain 5 AE940_RS15570 PF04560 RNA polymerase Rpb2, domain 7 AE940_RS15570 PF00562 RNA polymerase Rpb2, domain 6 AE940_RS15570 PF10385 RNA polymerase beta subunit external 1 domain AE940_RS15570 PF04565 RNA polymerase Rpb2, domain 3 AE940_RS15570 PF04561 RNA polymerase Rpb2, domain 2 AE940_RS15570 PF04563 RNA polymerase beta subunit AE940_RS15575 PF16320 Ribosomal protein L7/L12 dimerisation domain AE940_RS15575 PF00542 Ribosomal protein L7/L12 C-terminal domain AE940_RS15580 PF00466 Ribosomal protein L10 AE940_RS15585 PF00687 Ribosomal protein L1p/L10e family AE940_RS15590 PF03946 Ribosomal protein L11, N-terminal domain AE940_RS15590 PF00298 Ribosomal protein L11, RNA binding domain AE940_RS15595 PF00467 KOW motif AE940_RS15595 PF02357 Transcription termination factor nusG AE940_RS15610 PF03143 Elongation factor Tu C-terminal domain AE940_RS15610 PF00009 Elongation factor Tu GTP binding domain AE940_RS15610 PF03144 Elongation factor Tu domain 2 AE940_RS15635 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AE940_RS15635 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AE940_RS15640 PF00589 Phage integrase family AE940_RS15640 PF02899 Phage integrase, N-terminal SAM-like domain AE940_RS15645 PF01165 Ribosomal protein S21 AE940_RS15655 PF00132 Bacterial transferase hexapeptide (six repeats) AE940_RS15665 PF00749 tRNA synthetases class I (E and Q), catalytic domain AE940_RS15670 PF07698 7TM receptor with intracellular HD hydrolase AE940_RS15670 PF07697 7TM-HD extracellular AE940_RS15670 PF01966 HD domain AE940_RS15675 PF01451 Low molecular weight phosphotyrosine protein phosphatase AE940_RS15685 PF17764 3′ DNA-binding domain (3′BD) AE940_RS15685 PF18074 Primosomal protein N C-terminal domain AE940_RS15685 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AE940_RS15685 PF04851 Type III restriction enzyme, res subunit AE940_RS15685 PF00271 Helicase conserved C-terminal domain AE940_RS15700 PF00206 Lyase AE940_RS15700 PF10415 Fumarase C C-terminus AE940_RS15705 PF03605 Anaerobic c4-dicarboxylate membrane transporter AE940_RS15710 PF17763 Glutaminase/Asparaginase C-terminal domain AE940_RS15710 PF00710 Asparaginase, N-terminal AE940_RS15720 PF13186 Iron-sulfur cluster-binding domain AE940_RS15720 PF04055 Radical SAM superfamily AE940_RS15725 PF01381 Helix-turn-helix AE940_RS15735 PF01555 DNA methylase AE940_RS15740 PF04556 DpnII restriction endonuclease AE940_RS15745 PF02086 D12 class N6 adenine-specific DNA methyltransferase AE940_RS15785 PF01923 Cobalamin adenosyltransferase AE940_RS15835 PF07859 alpha/beta hydrolase fold AE940_RS15835 PF13472 GDSL-like Lipase/Acylhydrolase family AE940_RS15845 PF07694 5TMR of 5TMR-LYT AE940_RS15845 PF06580 Histidine kinase AE940_RS15845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS15850 PF04397 LytTr DNA-binding domain AE940_RS15850 PF00072 Response regulator receiver domain AE940_RS15865 PF07715 TonB-dependent Receptor Plug Domain AE940_RS15865 PF00593 TonB dependent receptor AE940_RS15880 PF12464 Maltose acetyltransferase AE940_RS15880 PF00132 Bacterial transferase hexapeptide (six repeats) AE940_RS15880 PF14602 Hexapeptide repeat of succinyl-transferase AE940_RS15885 PF00072 Response regulator receiver domain AE940_RS15885 PF00196 Bacterial regulatory proteins, luxR family AE940_RS15890 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AE940_RS15890 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AE940_RS15900 PF07883 Cupin domain AE940_RS15900 PF12833 Helix-turn-helix domain AE940_RS15905 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AE940_RS15905 PF02780 Transketolase, C-terminal domain AE940_RS15905 PF02779 Transketolase, pyrimidine binding domain AE940_RS15930 PF13302 Acetyltransferase (GNAT) domain AE940_RS15950 PF00589 Phage integrase family AE940_RS15950 PF02899 Phage integrase, N-terminal SAM-like domain AE940_RS15965 PF00483 Nucleotidyl transferase AE940_RS15965 PF01050 Mannose-6-phosphate isomerase AE940_RS15970 PF01230 HIT domain AE940_RS15975 PF01272 Transcription elongation factor, GreA/GreB, C-term AE940_RS15975 PF03449 Transcription elongation factor, N-terminal AE940_RS15985 PF00013 KH domain AE940_RS15985 PF00575 S1 RNA binding domain AE940_RS15985 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AE940_RS15985 PF01138 3' exoribonuclease family, domain 1 AE940_RS15985 PF03725 3' exoribonuclease family, domain 2 AE940_RS16000 PF07715 TonB-dependent Receptor Plug Domain AE940_RS16000 PF00593 TonB dependent receptor AE940_RS16025 PF00871 Acetokinase family AE940_RS16030 PF01515 Phosphate acetyl/butaryl transferase AE940_RS16035 PF02018 Carbohydrate binding domain AE940_RS16035 PF00722 Glycosyl hydrolases family 16 AE940_RS16040 PF17676 LD-carboxypeptidase C-terminal domain AE940_RS16040 PF02016 LD-carboxypeptidase N-terminal domain AE940_RS16045 PF04389 Peptidase family M28 AE940_RS16050 PF02657 Fe-S metabolism associated domain AE940_RS16055 PF13443 Cro/C1-type HTH DNA-binding domain AE940_RS16065 PF02517 CPBP intramembrane metalloprotease AE940_RS16070 PF01687 Riboflavin kinase AE940_RS16070 PF06574 FAD synthetase AE940_RS16075 PF13419 Haloacid dehalogenase-like hydrolase AE940_RS16080 PF00689 Cation transporting ATPase, C-terminus AE940_RS16080 PF00690 Cation transporter/ATPase, N-terminus AE940_RS16085 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS16085 PF09308 LuxQ, periplasmic AE940_RS16085 PF00072 Response regulator receiver domain AE940_RS16085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS16090 PF00301 Rubredoxin AE940_RS16095 PF02690 Na+/Pi-cotransporter AE940_RS16100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AE940_RS16100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AE940_RS16100 PF02824 TGS domain AE940_RS16100 PF03129 Anticodon binding domain AE940_RS16105 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS16105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS16105 PF07689 KaiB domain AE940_RS16130 PF00557 Metallopeptidase family M24 AE940_RS16130 PF05195 Aminopeptidase P, N-terminal domain AE940_RS16135 PF04963 Sigma-54 factor, core binding domain AE940_RS16135 PF00309 Sigma-54 factor, Activator interacting domain (AID) AE940_RS16135 PF04552 Sigma-54, DNA binding domain AE940_RS16145 PF01597 Glycine cleavage H-protein AE940_RS16150 PF00731 AIR carboxylase AE940_RS16155 PF04551 GcpE protein AE940_RS16175 PF07980 SusD family AE940_RS16175 PF14322 Starch-binding associating with outer membrane AE940_RS16180 PF07715 TonB-dependent Receptor Plug Domain AE940_RS16180 PF00593 TonB dependent receptor AE940_RS16185 PF14310 Fibronectin type III-like domain AE940_RS16185 PF00933 Glycosyl hydrolase family 3 N terminal domain AE940_RS16185 PF01915 Glycosyl hydrolase family 3 C-terminal domain AE940_RS16195 PF03572 Peptidase family S41 AE940_RS16195 PF13180 PDZ domain AE940_RS16200 PF00294 pfkB family carbohydrate kinase AE940_RS16215 PF07944 Beta-L-arabinofuranosidase, GH127 AE940_RS16235 PF07715 TonB-dependent Receptor Plug Domain AE940_RS16235 PF00593 TonB dependent receptor AE940_RS16240 PF13426 PAS domain AE940_RS16240 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS16240 PF08448 PAS fold AE940_RS16240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS16240 PF00072 Response regulator receiver domain AE940_RS16245 PF04055 Radical SAM superfamily AE940_RS16245 PF13187 4Fe-4S dicluster domain AE940_RS16250 PF02901 Pyruvate formate lyase-like AE940_RS16250 PF01228 Glycine radical AE940_RS16255 PF00083 Sugar (and other) transporter AE940_RS16260 PF01263 Aldose 1-epimerase AE940_RS16270 PF03992 Antibiotic biosynthesis monooxygenase AE940_RS16275 PF00156 Phosphoribosyl transferase domain AE940_RS16280 PF00459 Inositol monophosphatase family AE940_RS16290 PF17801 Alpha galactosidase C-terminal beta sandwich domain AE940_RS16290 PF16499 Alpha galactosidase A AE940_RS16315 PF04991 LicD family AE940_RS16320 PF00155 Aminotransferase class I and II AE940_RS16355 PF01501 Glycosyl transferase family 8 AE940_RS16405 PF09297 NADH pyrophosphatase zinc ribbon domain AE940_RS16405 PF00293 NUDIX domain AE940_RS16420 PF01751 Toprim domain AE940_RS16420 PF01131 DNA topoisomerase AE940_RS16420 PF13368 Topoisomerase C-terminal repeat AE940_RS16430 PF05746 DALR anticodon binding domain AE940_RS16430 PF03485 Arginyl tRNA synthetase N terminal domain AE940_RS16430 PF00750 tRNA synthetases class I (R) AE940_RS16435 PF00216 Bacterial DNA-binding protein AE940_RS16460 PF02355 Protein export membrane protein AE940_RS16460 PF07549 SecD/SecF GG Motif AE940_RS16465 PF00216 Bacterial DNA-binding protein AE940_RS16500 PF12833 Helix-turn-helix domain AE940_RS16515 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AE940_RS16515 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AE940_RS16515 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AE940_RS16520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AE940_RS16530 PF03009 Glycerophosphoryl diester phosphodiesterase family AE940_RS16540 PF01293 Phosphoenolpyruvate carboxykinase AE940_RS16545 PF00593 TonB dependent receptor AE940_RS16545 PF07715 TonB-dependent Receptor Plug Domain AE940_RS16560 PF13229 Right handed beta helix region AE940_RS16580 PF07715 TonB-dependent Receptor Plug Domain AE940_RS16580 PF00593 TonB dependent receptor AE940_RS16590 PF14492 Elongation Factor G, domain II AE940_RS16590 PF00679 Elongation factor G C-terminus AE940_RS16590 PF00009 Elongation factor Tu GTP binding domain AE940_RS16590 PF03144 Elongation factor Tu domain 2 AE940_RS16595 PF00312 Ribosomal protein S15 AE940_RS16605 PF13193 AMP-binding enzyme C-terminal domain AE940_RS16605 PF00501 AMP-binding enzyme AE940_RS16610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS16610 PF01627 Hpt domain AE940_RS16610 PF00072 Response regulator receiver domain AE940_RS16610 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AE940_RS16610 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS16610 PF00672 HAMP domain AE940_RS16615 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AE940_RS16615 PF05221 S-adenosyl-L-homocysteine hydrolase AE940_RS16630 PF00884 Sulfatase AE940_RS16630 PF16385 Domain of unknown function AE940_RS16640 PF00593 TonB dependent receptor AE940_RS16640 PF07715 TonB-dependent Receptor Plug Domain AE940_RS16655 PF12704 MacB-like periplasmic core domain AE940_RS16655 PF02687 FtsX-like permease family AE940_RS16660 PF02033 Ribosome-binding factor A AE940_RS16665 PF01596 O-methyltransferase AE940_RS16670 PF00224 Pyruvate kinase, barrel domain AE940_RS16670 PF02887 Pyruvate kinase, alpha/beta domain AE940_RS16675 PF01220 Dehydroquinase class II AE940_RS16680 PF00589 Phage integrase family AE940_RS16680 PF02899 Phage integrase, N-terminal SAM-like domain AE940_RS16690 PF00578 AhpC/TSA family AE940_RS16695 PF01078 Magnesium chelatase, subunit ChlI AE940_RS16695 PF13335 Magnesium chelatase, subunit ChlI C-terminal AE940_RS16715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS16715 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS16715 PF07495 Y_Y_Y domain AE940_RS16715 PF00072 Response regulator receiver domain AE940_RS16715 PF12833 Helix-turn-helix domain AE940_RS16715 PF07494 Two component regulator propeller AE940_RS16720 PF13186 Iron-sulfur cluster-binding domain AE940_RS16720 PF04055 Radical SAM superfamily AE940_RS16730 PF13607 Succinyl-CoA ligase like flavodoxin domain AE940_RS16730 PF13380 CoA binding domain AE940_RS16770 PF09334 tRNA synthetases class I (M) AE940_RS16770 PF01588 Putative tRNA binding domain AE940_RS16770 PF08264 Anticodon-binding domain of tRNA AE940_RS16780 PF00534 Glycosyl transferases group 1 AE940_RS16780 PF13439 Glycosyltransferase Family 4 AE940_RS16800 PF02350 UDP-N-acetylglucosamine 2-epimerase AE940_RS16805 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AE940_RS16805 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AE940_RS16805 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AE940_RS16810 PF13439 Glycosyltransferase Family 4 AE940_RS16810 PF00534 Glycosyl transferases group 1 AE940_RS16815 PF00535 Glycosyl transferase family 2 AE940_RS16820 PF02146 Sir2 family AE940_RS16825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AE940_RS16825 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AE940_RS16830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AE940_RS16830 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AE940_RS16835 PF13404 AsnC-type helix-turn-helix domain AE940_RS16835 PF01037 Lrp/AsnC ligand binding domain AE940_RS16850 PF00072 Response regulator receiver domain AE940_RS16850 PF04397 LytTr DNA-binding domain AE940_RS16855 PF07694 5TMR of 5TMR-LYT AE940_RS16855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS16855 PF06580 Histidine kinase AE940_RS16865 PF00873 AcrB/AcrD/AcrF family AE940_RS16930 PF00593 TonB dependent receptor AE940_RS16930 PF07715 TonB-dependent Receptor Plug Domain AE940_RS16940 PF00083 Sugar (and other) transporter AE940_RS16965 PF12833 Helix-turn-helix domain AE940_RS16965 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS16965 PF07494 Two component regulator propeller AE940_RS16965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS16965 PF00072 Response regulator receiver domain AE940_RS16965 PF07495 Y_Y_Y domain AE940_RS16990 PF01699 Sodium/calcium exchanger protein AE940_RS17000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS17000 PF01751 Toprim domain AE940_RS17000 PF00986 DNA gyrase B subunit, carboxyl terminus AE940_RS17000 PF00204 DNA gyrase B AE940_RS17005 PF01467 Cytidylyltransferase-like AE940_RS17010 PF01471 Putative peptidoglycan binding domain AE940_RS17010 PF17820 PDZ domain AE940_RS17010 PF03572 Peptidase family S41 AE940_RS17015 PF01569 PAP2 superfamily AE940_RS17030 PF02910 Fumarate reductase flavoprotein C-term AE940_RS17030 PF00890 FAD binding domain AE940_RS17035 PF13085 2Fe-2S iron-sulfur cluster binding domain AE940_RS17050 PF07715 TonB-dependent Receptor Plug Domain AE940_RS17050 PF00593 TonB dependent receptor AE940_RS17065 PF17145 Domain of unknown function (DUF5119) AE940_RS17075 PF17782 DprA winged helix domain AE940_RS17075 PF02481 DNA recombination-mediator protein A AE940_RS17085 PF01136 Peptidase family U32 AE940_RS17095 PF01207 Dihydrouridine synthase (Dus) AE940_RS17105 PF01370 NAD dependent epimerase/dehydratase family AE940_RS17110 PF16916 Dimerisation domain of Zinc Transporter AE940_RS17110 PF01545 Cation efflux family AE940_RS17115 PF17876 Cold shock domain AE940_RS17115 PF08206 Ribonuclease B OB domain AE940_RS17115 PF00773 RNB domain AE940_RS17115 PF00575 S1 RNA binding domain AE940_RS17140 PF00291 Pyridoxal-phosphate dependent enzyme AE940_RS17155 PF06071 Protein of unknown function (DUF933) AE940_RS17155 PF01926 50S ribosome-binding GTPase AE940_RS17160 PF02558 Ketopantoate reductase PanE/ApbA AE940_RS17160 PF08546 Ketopantoate reductase PanE/ApbA C terminal AE940_RS17165 PF01790 Prolipoprotein diacylglyceryl transferase AE940_RS17175 PF00488 MutS domain V AE940_RS17175 PF05192 MutS domain III AE940_RS17175 PF05188 MutS domain II AE940_RS17175 PF01624 MutS domain I AE940_RS17175 PF05190 MutS family domain IV AE940_RS17185 PF09334 tRNA synthetases class I (M) AE940_RS17185 PF13603 Leucyl-tRNA synthetase, Domain 2 AE940_RS17185 PF08264 Anticodon-binding domain of tRNA AE940_RS17190 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AE940_RS17190 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AE940_RS17195 PF01725 Ham1 family AE940_RS17200 PF02445 Quinolinate synthetase A protein AE940_RS17205 PF00588 SpoU rRNA Methylase family AE940_RS17205 PF08032 RNA 2'-O ribose methyltransferase substrate binding AE940_RS17220 PF00535 Glycosyl transferase family 2 AE940_RS17255 PF03412 Peptidase C39 family AE940_RS17255 PF00005 ABC transporter AE940_RS17255 PF00664 ABC transporter transmembrane region AE940_RS17270 PF04055 Radical SAM superfamily AE940_RS17270 PF01018 GTP1/OBG AE940_RS17270 PF01926 50S ribosome-binding GTPase AE940_RS17280 PF00884 Sulfatase AE940_RS17290 PF07715 TonB-dependent Receptor Plug Domain AE940_RS17290 PF00593 TonB dependent receptor AE940_RS17295 PF01740 STAS domain AE940_RS17295 PF00916 Sulfate permease family AE940_RS17300 PF02915 Rubrerythrin AE940_RS17305 PF02910 Fumarate reductase flavoprotein C-term AE940_RS17305 PF00890 FAD binding domain AE940_RS17315 PF07992 Pyridine nucleotide-disulphide oxidoreductase AE940_RS17315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AE940_RS17325 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AE940_RS17325 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AE940_RS17335 PF01938 TRAM domain AE940_RS17335 PF04055 Radical SAM superfamily AE940_RS17335 PF00919 Uncharacterized protein family UPF0004 AE940_RS17345 PF00703 Glycosyl hydrolases family 2 AE940_RS17345 PF16355 Domain of unknown function (DUF4982) AE940_RS17345 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AE940_RS17345 PF02837 Glycosyl hydrolases family 2, sugar binding domain AE940_RS17495 PF18075 FtsX extracellular domain AE940_RS17505 PF02673 Bacitracin resistance protein BacA AE940_RS17510 PF16198 tRNA pseudouridylate synthase B C-terminal domain AE940_RS17510 PF01509 TruB family pseudouridylate synthase (N terminal domain) AE940_RS17515 PF02547 Queuosine biosynthesis protein AE940_RS17520 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AE940_RS17525 PF00438 S-adenosylmethionine synthetase, N-terminal domain AE940_RS17525 PF02772 S-adenosylmethionine synthetase, central domain AE940_RS17525 PF02773 S-adenosylmethionine synthetase, C-terminal domain AE940_RS17530 PF03641 Possible lysine decarboxylase AE940_RS17545 PF00825 Ribonuclease P AE940_RS17550 PF01026 TatD related DNase AE940_RS17555 PF00579 tRNA synthetases class I (W and Y) AE940_RS17560 PF07676 WD40-like Beta Propeller Repeat AE940_RS17560 PF00326 Prolyl oligopeptidase family AE940_RS17570 PF12411 Choline sulfatase enzyme C terminal AE940_RS17570 PF00884 Sulfatase AE940_RS17575 PF04962 KduI/IolB family AE940_RS17590 PF08331 Domain of unknown function (DUF1730) AE940_RS17595 PF01522 Polysaccharide deacetylase AE940_RS17620 PF00005 ABC transporter AE940_RS17630 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AE940_RS17630 PF01266 FAD dependent oxidoreductase AE940_RS17645 PF02844 Phosphoribosylglycinamide synthetase, N domain AE940_RS17645 PF02843 Phosphoribosylglycinamide synthetase, C domain AE940_RS17645 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AE940_RS17650 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AE940_RS17650 PF00326 Prolyl oligopeptidase family AE940_RS17655 PF02926 THUMP domain AE940_RS17655 PF01170 Putative RNA methylase family UPF0020 AE940_RS17660 PF00132 Bacterial transferase hexapeptide (six repeats) AE940_RS17665 PF06580 Histidine kinase AE940_RS17665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS17665 PF07694 5TMR of 5TMR-LYT AE940_RS17670 PF04397 LytTr DNA-binding domain AE940_RS17670 PF00072 Response regulator receiver domain AE940_RS17680 PF01367 5'-3' exonuclease, C-terminal SAM fold AE940_RS17680 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AE940_RS17680 PF00476 DNA polymerase family A AE940_RS17680 PF01612 3'-5' exonuclease AE940_RS17685 PF00348 Polyprenyl synthetase AE940_RS17695 PF01791 DeoC/LacD family aldolase AE940_RS17700 PF03819 MazG nucleotide pyrophosphohydrolase domain AE940_RS17705 PF02580 D-Tyr-tRNA(Tyr) deacylase AE940_RS17710 PF01541 GIY-YIG catalytic domain AE940_RS17710 PF08459 UvrC Helix-hairpin-helix N-terminal AE940_RS17715 PF00156 Phosphoribosyl transferase domain AE940_RS17720 PF01134 Glucose inhibited division protein A AE940_RS17720 PF13932 GidA associated domain AE940_RS17745 PF02130 Uncharacterized protein family UPF0054 AE940_RS17765 PF07670 Nucleoside recognition AE940_RS17775 PF05496 Holliday junction DNA helicase RuvB P-loop domain AE940_RS17775 PF17864 RuvB AAA lid domain AE940_RS17775 PF05491 RuvB C-terminal winged helix domain AE940_RS17790 PF10459 Peptidase S46 AE940_RS17805 PF00271 Helicase conserved C-terminal domain AE940_RS17805 PF00270 DEAD/DEAH box helicase AE940_RS17815 PF00294 pfkB family carbohydrate kinase AE940_RS17820 PF01380 SIS domain AE940_RS17820 PF00571 CBS domain AE940_RS17825 PF03641 Possible lysine decarboxylase AE940_RS17830 PF05193 Peptidase M16 inactive domain AE940_RS17830 PF00675 Insulinase (Peptidase family M16) AE940_RS17845 PF03786 D-mannonate dehydratase (UxuA) AE940_RS17850 PF00106 short chain dehydrogenase AE940_RS17860 PF10502 Signal peptidase, peptidase S26 AE940_RS17865 PF10502 Signal peptidase, peptidase S26 AE940_RS17870 PF01113 Dihydrodipicolinate reductase, N-terminus AE940_RS17870 PF05173 Dihydrodipicolinate reductase, C-terminus AE940_RS17900 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AE940_RS17900 PF00132 Bacterial transferase hexapeptide (six repeats) AE940_RS17905 PF02321 Outer membrane efflux protein AE940_RS17910 PF00873 AcrB/AcrD/AcrF family AE940_RS17915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AE940_RS17915 PF00529 HlyD membrane-fusion protein of T1SS AE940_RS17920 PF02929 Beta galactosidase small chain AE940_RS17920 PF16353 Domain of unknown function(DUF4981) AE940_RS17920 PF00703 Glycosyl hydrolases family 2 AE940_RS17920 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AE940_RS17920 PF02837 Glycosyl hydrolases family 2, sugar binding domain AE940_RS17940 PF01406 tRNA synthetases class I (C) catalytic domain AE940_RS17940 PF09190 DALR domain AE940_RS17950 PF00486 Transcriptional regulatory protein, C terminal AE940_RS17950 PF00072 Response regulator receiver domain AE940_RS17955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS17955 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS17965 PF00072 Response regulator receiver domain AE940_RS17965 PF00486 Transcriptional regulatory protein, C terminal AE940_RS17970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS17970 PF18719 ArlS sensor domain AE940_RS17970 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS17975 PF00689 Cation transporting ATPase, C-terminus AE940_RS17975 PF00690 Cation transporter/ATPase, N-terminus AE940_RS17990 PF00271 Helicase conserved C-terminal domain AE940_RS17990 PF12419 SNF2 Helicase protein AE940_RS17990 PF00176 SNF2 family N-terminal domain AE940_RS18005 PF00365 Phosphofructokinase AE940_RS18010 PF00035 Double-stranded RNA binding motif AE940_RS18010 PF14622 Ribonuclease-III-like AE940_RS18015 PF02801 Beta-ketoacyl synthase, C-terminal domain AE940_RS18015 PF00109 Beta-ketoacyl synthase, N-terminal domain AE940_RS18020 PF00550 Phosphopantetheine attachment site AE940_RS18025 PF00551 Formyl transferase AE940_RS18030 PF11890 Domain of unknown function (DUF3410) AE940_RS18030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AE940_RS18030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AE940_RS18045 PF01501 Glycosyl transferase family 8 AE940_RS18050 PF05686 Glycosyl transferase family 90 AE940_RS18055 PF00535 Glycosyl transferase family 2 AE940_RS18060 PF00535 Glycosyl transferase family 2 AE940_RS18060 PF01501 Glycosyl transferase family 8 AE940_RS18065 PF00664 ABC transporter transmembrane region AE940_RS18065 PF00005 ABC transporter AE940_RS18075 PF01693 Caulimovirus viroplasmin AE940_RS18100 PF01202 Shikimate kinase AE940_RS18110 PF00183 Hsp90 protein AE940_RS18120 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AE940_RS18120 PF17810 Arginine decarboxylase helical bundle domain AE940_RS18120 PF17944 Arginine decarboxylase C-terminal helical extension AE940_RS18125 PF00696 Amino acid kinase family AE940_RS18130 PF08281 Sigma-70, region 4 AE940_RS18130 PF04542 Sigma-70 region 2 AE940_RS18190 PF07881 L-fucose isomerase, first N-terminal domain AE940_RS18190 PF02952 L-fucose isomerase, C-terminal domain AE940_RS18190 PF07882 L-fucose isomerase, second N-terminal domain AE940_RS18195 PF00465 Iron-containing alcohol dehydrogenase AE940_RS18200 PF00596 Class II Aldolase and Adducin N-terminal domain AE940_RS18205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AE940_RS18205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AE940_RS18210 PF07690 Major Facilitator Superfamily AE940_RS18215 PF17384 RimP C-terminal SH3 domain AE940_RS18215 PF02576 RimP N-terminal domain AE940_RS18220 PF00575 S1 RNA binding domain AE940_RS18220 PF08529 NusA N-terminal domain AE940_RS18220 PF13184 NusA-like KH domain AE940_RS18225 PF04760 Translation initiation factor IF-2, N-terminal region AE940_RS18225 PF11987 Translation-initiation factor 2 AE940_RS18225 PF00009 Elongation factor Tu GTP binding domain AE940_RS18235 PF01458 Uncharacterized protein family (UPF0051) AE940_RS18245 PF00005 ABC transporter AE940_RS18250 PF01458 Uncharacterized protein family (UPF0051) AE940_RS18255 PF00266 Aminotransferase class-V AE940_RS18260 PF01906 Putative heavy-metal-binding AE940_RS18265 PF17801 Alpha galactosidase C-terminal beta sandwich domain AE940_RS18265 PF16499 Alpha galactosidase A AE940_RS18275 PF07715 TonB-dependent Receptor Plug Domain AE940_RS18275 PF00593 TonB dependent receptor AE940_RS18290 PF16874 Glycosyl hydrolase family 36 C-terminal domain AE940_RS18290 PF16875 Glycosyl hydrolase family 36 N-terminal domain AE940_RS18300 PF03030 Inorganic H+ pyrophosphatase AE940_RS18310 PF01351 Ribonuclease HII AE940_RS18320 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AE940_RS18320 PF01676 Metalloenzyme superfamily AE940_RS18325 PF00989 PAS fold AE940_RS18325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS18325 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS18345 PF01751 Toprim domain AE940_RS18345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS18345 PF00986 DNA gyrase B subunit, carboxyl terminus AE940_RS18345 PF00204 DNA gyrase B AE940_RS18350 PF01649 Ribosomal protein S20 AE940_RS18360 PF11967 Recombination protein O N terminal AE940_RS18360 PF02565 Recombination protein O C terminal AE940_RS18365 PF09424 Yqey-like protein AE940_RS18370 PF00091 Tubulin/FtsZ family, GTPase domain AE940_RS18370 PF12327 FtsZ family, C-terminal domain AE940_RS18375 PF02491 SHS2 domain inserted in FTSA AE940_RS18385 PF01225 Mur ligase family, catalytic domain AE940_RS18385 PF02875 Mur ligase family, glutamate ligase domain AE940_RS18385 PF08245 Mur ligase middle domain AE940_RS18390 PF04101 Glycosyltransferase family 28 C-terminal domain AE940_RS18390 PF03033 Glycosyltransferase family 28 N-terminal domain AE940_RS18395 PF01098 Cell cycle protein AE940_RS18400 PF08245 Mur ligase middle domain AE940_RS18400 PF02875 Mur ligase family, glutamate ligase domain AE940_RS18405 PF00953 Glycosyl transferase family 4 AE940_RS18410 PF01225 Mur ligase family, catalytic domain AE940_RS18410 PF02875 Mur ligase family, glutamate ligase domain AE940_RS18410 PF08245 Mur ligase middle domain AE940_RS18415 PF03717 Penicillin-binding Protein dimerisation domain AE940_RS18415 PF00905 Penicillin binding protein transpeptidase domain AE940_RS18425 PF01795 MraW methylase family AE940_RS18430 PF02381 MraZ protein, putative antitoxin-like AE940_RS18440 PF08281 Sigma-70, region 4 AE940_RS18440 PF04542 Sigma-70 region 2 AE940_RS18445 PF07715 TonB-dependent Receptor Plug Domain AE940_RS18445 PF00593 TonB dependent receptor AE940_RS18465 PF01966 HD domain AE940_RS18470 PF00692 dUTPase AE940_RS18485 PF01551 Peptidase family M23 AE940_RS18490 PF07495 Y_Y_Y domain AE940_RS18490 PF00072 Response regulator receiver domain AE940_RS18490 PF07494 Two component regulator propeller AE940_RS18490 PF12833 Helix-turn-helix domain AE940_RS18490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS18490 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS18495 PF04616 Glycosyl hydrolases family 43 AE940_RS18495 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AE940_RS18500 PF07691 PA14 domain AE940_RS18500 PF01915 Glycosyl hydrolase family 3 C-terminal domain AE940_RS18500 PF00933 Glycosyl hydrolase family 3 N terminal domain AE940_RS18500 PF14310 Fibronectin type III-like domain AE940_RS18510 PF16353 Domain of unknown function(DUF4981) AE940_RS18510 PF02837 Glycosyl hydrolases family 2, sugar binding domain AE940_RS18510 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AE940_RS18510 PF00703 Glycosyl hydrolases family 2 AE940_RS18510 PF02929 Beta galactosidase small chain AE940_RS18525 PF04616 Glycosyl hydrolases family 43 AE940_RS18525 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AE940_RS18545 PF01074 Glycosyl hydrolases family 38 N-terminal domain AE940_RS18545 PF09261 Alpha mannosidase middle domain AE940_RS18545 PF09261 Alpha mannosidase middle domain AE940_RS18545 PF07748 Glycosyl hydrolases family 38 C-terminal domain AE940_RS18545 PF07748 Glycosyl hydrolases family 38 C-terminal domain AE940_RS18545 PF01074 Glycosyl hydrolases family 38 N-terminal domain AE940_RS18550 PF00593 TonB dependent receptor AE940_RS18550 PF07715 TonB-dependent Receptor Plug Domain AE940_RS18575 PF04616 Glycosyl hydrolases family 43 AE940_RS18600 PF07971 Glycosyl hydrolase family 92 AE940_RS18600 PF17678 Glycosyl hydrolase family 92 N-terminal domain AE940_RS18610 PF01263 Aldose 1-epimerase AE940_RS18615 PF04235 Protein of unknown function (DUF418) AE940_RS18615 PF07786 Protein of unknown function (DUF1624) AE940_RS18635 PF01757 Acyltransferase family AE940_RS18665 PF08531 Alpha-L-rhamnosidase N-terminal domain AE940_RS18665 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain AE940_RS18665 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain AE940_RS18665 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain AE940_RS18670 PF07687 Peptidase dimerisation domain AE940_RS18670 PF01546 Peptidase family M20/M25/M40 AE940_RS18675 PF00501 AMP-binding enzyme AE940_RS18680 PF03462 PCRF domain AE940_RS18680 PF00472 RF-1 domain AE940_RS18690 PF01928 CYTH domain AE940_RS18710 PF02837 Glycosyl hydrolases family 2, sugar binding domain AE940_RS18710 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AE940_RS18710 PF00703 Glycosyl hydrolases family 2 AE940_RS18710 PF16355 Domain of unknown function (DUF4982) AE940_RS18715 PF00728 Glycosyl hydrolase family 20, catalytic domain AE940_RS18715 PF02838 Glycosyl hydrolase family 20, domain 2 AE940_RS18715 PF07691 PA14 domain AE940_RS18725 PF07470 Glycosyl Hydrolase Family 88 AE940_RS18740 PF07715 TonB-dependent Receptor Plug Domain AE940_RS18740 PF00593 TonB dependent receptor AE940_RS18745 PF07495 Y_Y_Y domain AE940_RS18745 PF07494 Two component regulator propeller AE940_RS18745 PF12833 Helix-turn-helix domain AE940_RS18745 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS18745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS18745 PF00072 Response regulator receiver domain AE940_RS18750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS18750 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS18750 PF12833 Helix-turn-helix domain AE940_RS18750 PF07494 Two component regulator propeller AE940_RS18750 PF00072 Response regulator receiver domain AE940_RS18750 PF07495 Y_Y_Y domain AE940_RS18765 PF00933 Glycosyl hydrolase family 3 N terminal domain AE940_RS18765 PF01915 Glycosyl hydrolase family 3 C-terminal domain AE940_RS18765 PF14310 Fibronectin type III-like domain AE940_RS18775 PF07715 TonB-dependent Receptor Plug Domain AE940_RS18775 PF00593 TonB dependent receptor AE940_RS18790 PF05973 Phage derived protein Gp49-like (DUF891) AE940_RS18810 PF07715 TonB-dependent Receptor Plug Domain AE940_RS18810 PF00593 TonB dependent receptor AE940_RS18830 PF00521 DNA gyrase/topoisomerase IV, subunit A AE940_RS18835 PF03129 Anticodon binding domain AE940_RS18840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AE940_RS18840 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AE940_RS18870 PF02335 Cytochrome c552 AE940_RS18880 PF01578 Cytochrome C assembly protein AE940_RS18895 PF00144 Beta-lactamase AE940_RS18900 PF01380 SIS domain AE940_RS18920 PF07075 Protein of unknown function (DUF1343) AE940_RS18940 PF00535 Glycosyl transferase family 2 AE940_RS18955 PF00474 Sodium:solute symporter family AE940_RS18960 PF07075 Protein of unknown function (DUF1343) AE940_RS18965 PF07980 SusD family AE940_RS18965 PF14322 Starch-binding associating with outer membrane AE940_RS18970 PF00593 TonB dependent receptor AE940_RS18970 PF07715 TonB-dependent Receptor Plug Domain AE940_RS18985 PF02774 Semialdehyde dehydrogenase, dimerisation domain AE940_RS18985 PF01118 Semialdehyde dehydrogenase, NAD binding domain AE940_RS18990 PF00999 Sodium/hydrogen exchanger family AE940_RS18990 PF00582 Universal stress protein family AE940_RS18995 PF00899 ThiF family AE940_RS19000 PF00005 ABC transporter AE940_RS19010 PF00209 Sodium:neurotransmitter symporter family AE940_RS19020 PF01225 Mur ligase family, catalytic domain AE940_RS19020 PF02875 Mur ligase family, glutamate ligase domain AE940_RS19020 PF08245 Mur ligase middle domain AE940_RS19030 PF00282 Pyridoxal-dependent decarboxylase conserved domain AE940_RS19035 PF04960 Glutaminase AE940_RS19040 PF00072 Response regulator receiver domain AE940_RS19040 PF00989 PAS fold AE940_RS19040 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS19040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS19040 PF18415 Histidine kinase receptor ArcB trans-membrane domain AE940_RS19040 PF01627 Hpt domain AE940_RS19045 PF00809 Pterin binding enzyme AE940_RS19050 PF02457 DisA bacterial checkpoint controller nucleotide-binding AE940_RS19150 PF04172 LrgB-like family AE940_RS19155 PF03788 LrgA family AE940_RS19175 PF01515 Phosphate acetyl/butaryl transferase AE940_RS19180 PF00871 Acetokinase family AE940_RS19185 PF00245 Alkaline phosphatase AE940_RS19190 PF01883 Iron-sulfur cluster assembly protein AE940_RS19195 PF00149 Calcineurin-like phosphoesterase AE940_RS19200 PF04002 RadC-like JAB domain AE940_RS19205 PF00535 Glycosyl transferase family 2 AE940_RS19210 PF08207 Elongation factor P (EF-P) KOW-like domain AE940_RS19210 PF09285 Elongation factor P, C-terminal AE940_RS19210 PF01132 Elongation factor P (EF-P) OB domain AE940_RS19215 PF00069 Protein kinase domain AE940_RS19215 PF03793 PASTA domain AE940_RS19220 PF00849 RNA pseudouridylate synthase AE940_RS19220 PF01479 S4 domain AE940_RS19225 PF01820 D-ala D-ala ligase N-terminus AE940_RS19225 PF07478 D-ala D-ala ligase C-terminus AE940_RS19245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AE940_RS19245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AE940_RS19265 PF01472 PUA domain AE940_RS19265 PF00696 Amino acid kinase family AE940_RS19275 PF01177 Asp/Glu/Hydantoin racemase AE940_RS19290 PF01103 Surface antigen AE940_RS19290 PF07244 Surface antigen variable number repeat AE940_RS19295 PF01255 Putative undecaprenyl diphosphate synthase AE940_RS19305 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AE940_RS19305 PF01872 RibD C-terminal domain AE940_RS19310 PF05175 Methyltransferase small domain AE940_RS19310 PF17827 PrmC N-terminal domain AE940_RS19315 PF02631 RecX family AE940_RS19320 PF00156 Phosphoribosyl transferase domain AE940_RS19330 PF00206 Lyase AE940_RS19355 PF13193 AMP-binding enzyme C-terminal domain AE940_RS19355 PF00501 AMP-binding enzyme AE940_RS19360 PF07883 Cupin domain AE940_RS19360 PF01381 Helix-turn-helix AE940_RS19365 PF14748 Pyrroline-5-carboxylate reductase dimerisation AE940_RS19365 PF03807 NADP oxidoreductase coenzyme F420-dependent AE940_RS19370 PF00202 Aminotransferase class-III AE940_RS19375 PF02774 Semialdehyde dehydrogenase, dimerisation domain AE940_RS19375 PF01118 Semialdehyde dehydrogenase, NAD binding domain AE940_RS19380 PF00764 Arginosuccinate synthase AE940_RS19390 PF02863 Arginine repressor, C-terminal domain AE940_RS19390 PF01316 Arginine repressor, DNA binding domain AE940_RS19405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS19405 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS19405 PF09308 LuxQ, periplasmic AE940_RS19405 PF00072 Response regulator receiver domain AE940_RS19410 PF13520 Amino acid permease AE940_RS19420 PF00056 lactate/malate dehydrogenase, NAD binding domain AE940_RS19420 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AE940_RS19425 PF17783 CvfB-like winged helix domain AE940_RS19425 PF13509 S1 domain AE940_RS19445 PF00912 Transglycosylase AE940_RS19450 PF01624 MutS domain I AE940_RS19450 PF00488 MutS domain V AE940_RS19450 PF05190 MutS family domain IV AE940_RS19450 PF05192 MutS domain III AE940_RS19450 PF05188 MutS domain II AE940_RS19460 PF16875 Glycosyl hydrolase family 36 N-terminal domain AE940_RS19460 PF16874 Glycosyl hydrolase family 36 C-terminal domain AE940_RS19475 PF07715 TonB-dependent Receptor Plug Domain AE940_RS19475 PF00593 TonB dependent receptor AE940_RS19500 PF00005 ABC transporter AE940_RS19500 PF12704 MacB-like periplasmic core domain AE940_RS19500 PF02687 FtsX-like permease family AE940_RS19505 PF00005 ABC transporter AE940_RS19505 PF12704 MacB-like periplasmic core domain AE940_RS19505 PF02687 FtsX-like permease family AE940_RS19510 PF00005 ABC transporter AE940_RS19515 PF00480 ROK family AE940_RS19520 PF01245 Ribosomal protein L19 AE940_RS19525 PF02872 5'-nucleotidase, C-terminal domain AE940_RS19525 PF00149 Calcineurin-like phosphoesterase AE940_RS19530 PF00149 Calcineurin-like phosphoesterase AE940_RS19530 PF02872 5'-nucleotidase, C-terminal domain AE940_RS19535 PF01915 Glycosyl hydrolase family 3 C-terminal domain AE940_RS19535 PF00933 Glycosyl hydrolase family 3 N terminal domain AE940_RS19540 PF01915 Glycosyl hydrolase family 3 C-terminal domain AE940_RS19540 PF00933 Glycosyl hydrolase family 3 N terminal domain AE940_RS19545 PF00593 TonB dependent receptor AE940_RS19545 PF07715 TonB-dependent Receptor Plug Domain AE940_RS19555 PF16385 Domain of unknown function AE940_RS19555 PF00884 Sulfatase AE940_RS19570 PF05576 PS-10 peptidase S37 AE940_RS19580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AE940_RS19580 PF07992 Pyridine nucleotide-disulphide oxidoreductase AE940_RS19590 PF02954 Bacterial regulatory protein, Fis family AE940_RS19590 PF00072 Response regulator receiver domain AE940_RS19590 PF00158 Sigma-54 interaction domain AE940_RS19595 PF03814 Potassium-transporting ATPase A subunit AE940_RS19605 PF02669 K+-transporting ATPase, c chain AE940_RS19615 PF02702 Osmosensitive K+ channel His kinase sensor domain AE940_RS19620 PF00512 His Kinase A (phospho-acceptor) domain AE940_RS19620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AE940_RS19620 PF00672 HAMP domain AE940_RS19620 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB AE940_RS19620 PF08448 PAS fold AE940_RS19635 PF00593 TonB dependent receptor AE940_RS19635 PF07715 TonB-dependent Receptor Plug Domain AE940_RS19680 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AE940_RS19680 PF00925 GTP cyclohydrolase II AE940_RS19685 PF00155 Aminotransferase class I and II AE940_RS19690 PF08531 Alpha-L-rhamnosidase N-terminal domain AE940_RS19690 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain AE940_RS19690 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain AE940_RS19690 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain AE940_RS19700 PF04204 Homoserine O-succinyltransferase AE940_RS19705 PF01136 Peptidase family U32 AE940_RS19705 PF12392 Collagenase AE940_RS19715 PF00593 TonB dependent receptor AE940_RS19715 PF07715 TonB-dependent Receptor Plug Domain AE940_RS19720 PF00072 Response regulator receiver domain AE940_RS19720 PF00196 Bacterial regulatory proteins, luxR family AE940_RS19735 PF18073 Rubredoxin metal binding domain AE940_RS19745 PF00710 Asparaginase, N-terminal AE940_RS19745 PF17763 Glutaminase/Asparaginase C-terminal domain AE940_RS19750 PF13840 ACT domain AE940_RS19750 PF00742 Homoserine dehydrogenase AE940_RS19750 PF03447 Homoserine dehydrogenase, NAD binding domain AE940_RS19750 PF00696 Amino acid kinase family AE940_RS19750 PF01842 ACT domain AE940_RS19755 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase AE940_RS19755 PF01676 Metalloenzyme superfamily AE940_RS19760 PF14821 Threonine synthase N terminus AE940_RS19760 PF00291 Pyridoxal-phosphate dependent enzyme