AE940_RS00165 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS00325 SM00287 Bacterial SH3 domain homologues AE940_RS00425 SM00481 DNA polymerase alpha chain like domain AE940_RS00465 SM00382 ATPases associated with a variety of cellular activities AE940_RS00530 SM00812 Alpha-L-fucosidase AE940_RS00535 SM01038 Beta galactosidase small chain AE940_RS00545 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS00550 SM00387 Histidine kinase-like ATPases AE940_RS00550 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS00590 SM00155 Phospholipase D. Active site motifs. AE940_RS00620 SM00965 Secretin and TonB N terminus short domain AE940_RS00655 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS00660 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AE940_RS00670 SM00422 helix_turn_helix, mercury resistance AE940_RS00675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AE940_RS00675 SM00954 Region found in RelA / SpoT proteins AE940_RS00680 SM00257 Lysin motif AE940_RS00690 SM00470 ParB-like nuclease domain AE940_RS00720 SM00382 ATPases associated with a variety of cellular activities AE940_RS00740 SM00116 Domain in cystathionine beta-synthase and other proteins. AE940_RS00740 SM00924 MgtE intracellular N domain AE940_RS00745 SM00650 Ribosomal RNA adenine dimethylases AE940_RS00780 SM01360 AE940_RS00780 AE940_RS00800 SM00382 ATPases associated with a variety of cellular activities AE940_RS00815 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS00830 SM00530 Helix-turn-helix XRE-family like proteins AE940_RS00865 SM00984 UDP binding domain AE940_RS00965 SM00822 AE940_RS00965 AE940_RS00995 SM01217 AE940_RS00995 AE940_RS01020 SM00606 Cellulose Binding Domain Type IV AE940_RS01035 SM01217 AE940_RS01035 AE940_RS01045 SM01018 B12 binding domain AE940_RS01115 SM00387 Histidine kinase-like ATPases AE940_RS01115 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS01185 SM00861 Transketolase, pyrimidine binding domain AE940_RS01215 SM00812 Alpha-L-fucosidase AE940_RS01235 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS01235 SM00387 Histidine kinase-like ATPases AE940_RS01235 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS01235 SM00448 cheY-homologous receiver domain AE940_RS01245 SM00812 Alpha-L-fucosidase AE940_RS01250 SM01290 AE940_RS01250 AE940_RS01275 SM01005 Alanine racemase, C-terminal domain AE940_RS01300 SM00387 Histidine kinase-like ATPases AE940_RS01335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AE940_RS01340 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AE940_RS01345 SM00937 AE940_RS01345 AE940_RS01395 SM00244 prohibitin homologues AE940_RS01435 SM01038 Beta galactosidase small chain AE940_RS01460 SM00028 Tetratricopeptide repeats AE940_RS01470 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS01475 SM00758 AE940_RS01475 AE940_RS01475 SM01217 AE940_RS01475 AE940_RS01495 SM00965 Secretin and TonB N terminus short domain AE940_RS01505 SM00965 Secretin and TonB N terminus short domain AE940_RS01515 SM00965 Secretin and TonB N terminus short domain AE940_RS01520 SM00421 helix_turn_helix, Lux Regulon AE940_RS01530 SM00965 Secretin and TonB N terminus short domain AE940_RS01560 SM00028 Tetratricopeptide repeats AE940_RS01585 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AE940_RS01585 SM00245 tail specific protease AE940_RS01605 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AE940_RS01660 SM00729 Elongator protein 3, MiaB family, Radical SAM AE940_RS01675 SM00850 LytTr DNA-binding domain AE940_RS01680 SM00729 Elongator protein 3, MiaB family, Radical SAM AE940_RS01685 SM00849 Metallo-beta-lactamase superfamily AE940_RS01710 SM00028 Tetratricopeptide repeats AE940_RS01710 SM00382 ATPases associated with a variety of cellular activities AE940_RS01835 SM00382 ATPases associated with a variety of cellular activities AE940_RS01855 SM00046 Diacylglycerol kinase catalytic domain (presumed) AE940_RS01900 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AE940_RS01905 SM00474 3'-5' exonuclease AE940_RS01915 SM00843 AE940_RS01915 AE940_RS01935 SM00100 Cyclic nucleotide-monophosphate binding domain AE940_RS01935 SM00419 helix_turn_helix, cAMP Regulatory protein AE940_RS01940 SM01230 AE940_RS01940 AE940_RS01955 SM00316 Ribosomal protein S1-like RNA-binding domain AE940_RS01995 SM00387 Histidine kinase-like ATPases AE940_RS01995 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS02015 SM00965 Secretin and TonB N terminus short domain AE940_RS02075 SM00957 SecA DEAD-like domain AE940_RS02075 SM00958 SecA preprotein cross-linking domain AE940_RS02110 SM01091 Transporter associated domain AE940_RS02135 SM00382 ATPases associated with a variety of cellular activities AE940_RS02320 SM00873 B3/4 domain AE940_RS02350 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS02365 SM00460 Transglutaminase/protease-like homologues AE940_RS02395 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS02470 SM00530 Helix-turn-helix XRE-family like proteins AE940_RS02480 SM00530 Helix-turn-helix XRE-family like proteins AE940_RS02495 SM00487 DEAD-like helicases superfamily AE940_RS02510 SM00155 Phospholipase D. Active site motifs. AE940_RS02595 SM00387 Histidine kinase-like ATPases AE940_RS02595 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS02595 SM00448 cheY-homologous receiver domain AE940_RS02605 SM00479 AE940_RS02605 AE940_RS02675 SM01192 AE940_RS02675 AE940_RS02675 SM01193 AE940_RS02675 AE940_RS02710 SM00363 S4 RNA-binding domain AE940_RS02725 SM00712 DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria. AE940_RS02735 SM01323 AE940_RS02735 AE940_RS02760 SM00382 ATPases associated with a variety of cellular activities AE940_RS02760 SM01086 C-terminal, D2-small domain, of ClpB protein AE940_RS02800 SM00382 ATPases associated with a variety of cellular activities AE940_RS02855 SM00518 AP endonuclease family 2 AE940_RS02875 SM01060 AE940_RS02875 AE940_RS02970 SM00463 Small MutS-related domain AE940_RS02970 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AE940_RS02970 SM00534 ATPase domain of DNA mismatch repair MUTS family AE940_RS03015 SM00387 Histidine kinase-like ATPases AE940_RS03015 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS03125 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AE940_RS03155 SM00965 Secretin and TonB N terminus short domain AE940_RS03255 SM01091 Transporter associated domain AE940_RS03295 SM00421 helix_turn_helix, Lux Regulon AE940_RS03330 SM01359 AE940_RS03330 AE940_RS03330 SM01360 AE940_RS03330 AE940_RS03335 SM00977 TilS substrate C-terminal domain AE940_RS03340 SM00899 AE940_RS03340 AE940_RS03460 SM00984 UDP binding domain AE940_RS03535 SM00028 Tetratricopeptide repeats AE940_RS03535 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS03630 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AE940_RS03630 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AE940_RS03660 SM00965 Secretin and TonB N terminus short domain AE940_RS03690 SM00382 ATPases associated with a variety of cellular activities AE940_RS03705 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS03715 SM00047 Lysozyme subfamily 2 AE940_RS03715 SM00257 Lysin motif AE940_RS03760 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS03765 SM00382 ATPases associated with a variety of cellular activities AE940_RS03780 SM00382 ATPases associated with a variety of cellular activities AE940_RS03800 SM00387 Histidine kinase-like ATPases AE940_RS03800 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS03810 SM00382 ATPases associated with a variety of cellular activities AE940_RS03810 SM00448 cheY-homologous receiver domain AE940_RS03815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AE940_RS03815 SM00387 Histidine kinase-like ATPases AE940_RS03845 SM00487 DEAD-like helicases superfamily AE940_RS03935 SM00984 UDP binding domain AE940_RS04000 SM00316 Ribosomal protein S1-like RNA-binding domain AE940_RS04005 SM00411 bacterial (prokaryotic) histone like domain AE940_RS04010 SM00478 endonuclease III AE940_RS04025 SM01091 Transporter associated domain AE940_RS04095 SM00387 Histidine kinase-like ATPases AE940_RS04095 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS04100 SM00448 cheY-homologous receiver domain AE940_RS04100 SM00862 Transcriptional regulatory protein, C terminal AE940_RS04125 SM00382 ATPases associated with a variety of cellular activities AE940_RS04170 SM00387 Histidine kinase-like ATPases AE940_RS04175 SM00382 ATPases associated with a variety of cellular activities AE940_RS04175 SM00448 cheY-homologous receiver domain AE940_RS04190 SM00382 ATPases associated with a variety of cellular activities AE940_RS04220 SM00729 Elongator protein 3, MiaB family, Radical SAM AE940_RS04220 SM00876 Biotin and Thiamin Synthesis associated domain AE940_RS04260 SM00878 Biotin carboxylase C-terminal domain AE940_RS04305 SM00861 Transketolase, pyrimidine binding domain AE940_RS04380 SM00062 Bacterial periplasmic substrate-binding proteins AE940_RS04410 SM00028 Tetratricopeptide repeats AE940_RS04420 SM00861 Transketolase, pyrimidine binding domain AE940_RS04460 SM00487 DEAD-like helicases superfamily AE940_RS04460 SM00490 helicase superfamily c-terminal domain AE940_RS04570 SM00732 Likely ribonuclease with RNase H fold. AE940_RS04585 SM00028 Tetratricopeptide repeats AE940_RS04590 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AE940_RS04640 SM00477 DNA/RNA non-specific endonuclease AE940_RS04640 SM00892 DNA/RNA non-specific endonuclease AE940_RS04685 SM01130 AE940_RS04685 AE940_RS04735 SM00812 Alpha-L-fucosidase AE940_RS04840 SM00271 DnaJ molecular chaperone homology domain AE940_RS04850 SM00382 ATPases associated with a variety of cellular activities AE940_RS04895 SM00421 helix_turn_helix, Lux Regulon AE940_RS04950 SM00857 Resolvase, N terminal domain AE940_RS05085 SM00316 Ribosomal protein S1-like RNA-binding domain AE940_RS05085 SM00732 Likely ribonuclease with RNase H fold. AE940_RS05090 SM00387 Histidine kinase-like ATPases AE940_RS05090 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS05100 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AE940_RS05540 SM00530 Helix-turn-helix XRE-family like proteins AE940_RS05555 SM01350 AE940_RS05555 AE940_RS05615 SM00448 cheY-homologous receiver domain AE940_RS05615 SM00850 LytTr DNA-binding domain AE940_RS05630 SM00382 ATPases associated with a variety of cellular activities AE940_RS05660 SM00773 Proposed nucleic acid binding domain AE940_RS05675 SM00729 Elongator protein 3, MiaB family, Radical SAM AE940_RS05690 SM00382 ATPases associated with a variety of cellular activities AE940_RS05770 SM00965 Secretin and TonB N terminus short domain AE940_RS05795 SM00411 bacterial (prokaryotic) histone like domain AE940_RS05820 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS05870 SM00347 helix_turn_helix multiple antibiotic resistance protein AE940_RS05880 SM00729 Elongator protein 3, MiaB family, Radical SAM AE940_RS05905 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS05950 SM00060 Fibronectin type 3 domain AE940_RS05975 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AE940_RS06075 SM00382 ATPases associated with a variety of cellular activities AE940_RS06075 SM01086 C-terminal, D2-small domain, of ClpB protein AE940_RS06125 SM00382 ATPases associated with a variety of cellular activities AE940_RS06145 SM00387 Histidine kinase-like ATPases AE940_RS06145 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS06145 SM00448 cheY-homologous receiver domain AE940_RS06235 SM00900 AE940_RS06235 AE940_RS06255 SM00487 DEAD-like helicases superfamily AE940_RS06255 SM00490 helicase superfamily c-terminal domain AE940_RS06300 SM00849 Metallo-beta-lactamase superfamily AE940_RS06335 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS06370 SM00387 Histidine kinase-like ATPases AE940_RS06375 SM00382 ATPases associated with a variety of cellular activities AE940_RS06375 SM00448 cheY-homologous receiver domain AE940_RS06395 SM00382 ATPases associated with a variety of cellular activities AE940_RS06430 SM00493 AE940_RS06430 AE940_RS06465 SM00903 Flavin reductase like domain AE940_RS06520 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS06555 SM00822 AE940_RS06555 AE940_RS06615 SM00245 tail specific protease AE940_RS06680 SM00382 ATPases associated with a variety of cellular activities AE940_RS06685 SM00382 ATPases associated with a variety of cellular activities AE940_RS06690 SM00387 Histidine kinase-like ATPases AE940_RS06690 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS06695 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS06705 SM00344 helix_turn_helix ASNC type AE940_RS06715 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS06775 SM00387 Histidine kinase-like ATPases AE940_RS06775 SM00448 cheY-homologous receiver domain AE940_RS06815 SM00382 ATPases associated with a variety of cellular activities AE940_RS06850 SM00419 helix_turn_helix, cAMP Regulatory protein AE940_RS06855 SM00387 Histidine kinase-like ATPases AE940_RS06860 SM00382 ATPases associated with a variety of cellular activities AE940_RS06860 SM00448 cheY-homologous receiver domain AE940_RS06880 SM00382 ATPases associated with a variety of cellular activities AE940_RS06890 SM00382 ATPases associated with a variety of cellular activities AE940_RS06940 SM00954 Region found in RelA / SpoT proteins AE940_RS06950 SM00360 RNA recognition motif AE940_RS06960 SM00382 ATPases associated with a variety of cellular activities AE940_RS07005 SM00341 Helicase and RNase D C-terminal AE940_RS07005 SM00382 ATPases associated with a variety of cellular activities AE940_RS07030 SM00448 cheY-homologous receiver domain AE940_RS07030 SM00862 Transcriptional regulatory protein, C terminal AE940_RS07035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AE940_RS07035 SM00387 Histidine kinase-like ATPases AE940_RS07035 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS07065 SM00382 ATPases associated with a variety of cellular activities AE940_RS07085 SM00448 cheY-homologous receiver domain AE940_RS07085 SM00862 Transcriptional regulatory protein, C terminal AE940_RS07090 SM00387 Histidine kinase-like ATPases AE940_RS07090 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS07100 SM00387 Histidine kinase-like ATPases AE940_RS07100 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS07125 SM00903 Flavin reductase like domain AE940_RS07195 SM00855 Phosphoglycerate mutase family AE940_RS07225 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. AE940_RS07230 SM01400 AE940_RS07230 AE940_RS07235 SM00387 Histidine kinase-like ATPases AE940_RS07240 SM00448 cheY-homologous receiver domain AE940_RS07450 SM00400 zinc finger AE940_RS07475 SM00421 helix_turn_helix, Lux Regulon AE940_RS07505 SM00028 Tetratricopeptide repeats AE940_RS07525 SM00642 Alpha-amylase domain AE940_RS07530 SM00642 Alpha-amylase domain AE940_RS07550 SM01230 AE940_RS07550 AE940_RS07565 SM00014 Acid phosphatase homologues AE940_RS07575 SM00881 CoA binding domain AE940_RS07585 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AE940_RS07630 SM00360 RNA recognition motif AE940_RS07635 SM01235 AE940_RS07635 AE940_RS07685 SM00967 RNA 2'-O ribose methyltransferase substrate binding AE940_RS07735 SM00849 Metallo-beta-lactamase superfamily AE940_RS07765 SM00984 UDP binding domain AE940_RS07775 SM00487 DEAD-like helicases superfamily AE940_RS07775 SM00490 helicase superfamily c-terminal domain AE940_RS07800 SM00382 ATPases associated with a variety of cellular activities AE940_RS07800 SM00464 Found in ATP-dependent protease La (LON) AE940_RS07830 SM00387 Histidine kinase-like ATPases AE940_RS07835 SM00382 ATPases associated with a variety of cellular activities AE940_RS07835 SM00448 cheY-homologous receiver domain AE940_RS07880 SM00382 ATPases associated with a variety of cellular activities AE940_RS07965 SM00046 Diacylglycerol kinase catalytic domain (presumed) AE940_RS07995 SM00382 ATPases associated with a variety of cellular activities AE940_RS08060 SM00530 Helix-turn-helix XRE-family like proteins AE940_RS08080 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AE940_RS08080 SM00292 breast cancer carboxy-terminal domain AE940_RS08080 SM00532 Ligase N family AE940_RS08085 SM01130 AE940_RS08085 AE940_RS08090 SM01059 Chloramphenicol acetyltransferase AE940_RS08130 SM00382 ATPases associated with a variety of cellular activities AE940_RS08130 SM01086 C-terminal, D2-small domain, of ClpB protein AE940_RS08135 SM00434 DNA Topoisomerase IV AE940_RS08140 SM00028 Tetratricopeptide repeats AE940_RS08155 SM00028 Tetratricopeptide repeats AE940_RS08165 SM00028 Tetratricopeptide repeats AE940_RS08170 SM00327 von Willebrand factor (vWF) type A domain AE940_RS08175 SM00327 von Willebrand factor (vWF) type A domain AE940_RS08185 SM00327 von Willebrand factor (vWF) type A domain AE940_RS08195 SM00257 Lysin motif AE940_RS08195 SM00411 bacterial (prokaryotic) histone like domain AE940_RS08200 SM00411 bacterial (prokaryotic) histone like domain AE940_RS08205 SM00729 Elongator protein 3, MiaB family, Radical SAM AE940_RS08210 SM00382 ATPases associated with a variety of cellular activities AE940_RS08210 SM00962 SRP54-type protein, GTPase domain AE940_RS08210 SM00963 SRP54-type protein, helical bundle domain AE940_RS08225 SM00852 Probable molybdopterin binding domain AE940_RS08245 SM00946 Prolyl-tRNA synthetase, C-terminal AE940_RS08255 SM00245 tail specific protease AE940_RS08280 SM00855 Phosphoglycerate mutase family AE940_RS08335 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AE940_RS08335 SM00387 Histidine kinase-like ATPases AE940_RS08335 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS08515 SM00876 Biotin and Thiamin Synthesis associated domain AE940_RS08700 SM00873 B3/4 domain AE940_RS08700 SM00874 tRNA synthetase B5 domain AE940_RS08700 SM00896 Ferredoxin-fold anticodon binding domain AE940_RS08830 SM00900 AE940_RS08830 AE940_RS08925 SM00257 Lysin motif AE940_RS08940 SM01409 AE940_RS08940 AE940_RS08960 SM00487 DEAD-like helicases superfamily AE940_RS08960 SM00490 helicase superfamily c-terminal domain AE940_RS08970 SM00460 Transglutaminase/protease-like homologues AE940_RS08975 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AE940_RS08985 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AE940_RS08985 SM00387 Histidine kinase-like ATPases AE940_RS08985 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS08985 SM00448 cheY-homologous receiver domain AE940_RS09000 SM00382 ATPases associated with a variety of cellular activities AE940_RS09020 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS09030 SM00851 MGS-like domain AE940_RS09030 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AE940_RS09035 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AE940_RS09140 SM00870 AE940_RS09140 AE940_RS09150 SM00448 cheY-homologous receiver domain AE940_RS09170 SM00421 helix_turn_helix, Lux Regulon AE940_RS09180 SM00798 AICARFT/IMPCHase bienzyme AE940_RS09325 SM00354 helix_turn _helix lactose operon repressor AE940_RS09340 SM00387 Histidine kinase-like ATPases AE940_RS09340 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS09340 SM00448 cheY-homologous receiver domain AE940_RS09350 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AE940_RS09400 SM00360 RNA recognition motif AE940_RS09420 SM00382 ATPases associated with a variety of cellular activities AE940_RS09520 SM00448 cheY-homologous receiver domain AE940_RS09520 SM00862 Transcriptional regulatory protein, C terminal AE940_RS09525 SM00387 Histidine kinase-like ATPases AE940_RS09525 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS09560 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AE940_RS09565 SM00460 Transglutaminase/protease-like homologues AE940_RS09570 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AE940_RS09605 SM00382 ATPases associated with a variety of cellular activities AE940_RS09630 SM00028 Tetratricopeptide repeats AE940_RS09655 SM00857 Resolvase, N terminal domain AE940_RS09680 SM00644 AE940_RS09680 AE940_RS09695 SM00942 Primase C terminal 1 (PriCT-1) AE940_RS09705 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AE940_RS09920 SM00850 LytTr DNA-binding domain AE940_RS09945 SM00387 Histidine kinase-like ATPases AE940_RS09945 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS09950 SM00387 Histidine kinase-like ATPases AE940_RS09955 SM00320 WD40 repeats AE940_RS09970 SM00331 Sigma factor PP2C-like phosphatases AE940_RS09970 SM00448 cheY-homologous receiver domain AE940_RS09995 SM00670 Large family of predicted nucleotide-binding domains AE940_RS10010 SM00028 Tetratricopeptide repeats AE940_RS10015 SM00967 RNA 2'-O ribose methyltransferase substrate binding AE940_RS10030 SM00479 AE940_RS10030 AE940_RS10035 SM00480 DNA polymerase III beta subunit AE940_RS10050 SM00849 Metallo-beta-lactamase superfamily AE940_RS10165 SM00382 ATPases associated with a variety of cellular activities AE940_RS10220 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS10230 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS10235 SM00710 Parallel beta-helix repeats AE940_RS10240 SM01217 AE940_RS10240 AE940_RS10255 SM01018 B12 binding domain AE940_RS10265 SM01217 AE940_RS10265 AE940_RS10275 SM00965 Secretin and TonB N terminus short domain AE940_RS10325 SM00226 Low molecular weight phosphatase family AE940_RS10365 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS10380 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS10380 SM00871 Bacterial transcription activator, effector binding domain AE940_RS10400 SM00641 Glycosyl hydrolases family 25 AE940_RS10415 SM01276 AE940_RS10415 AE940_RS10475 SM00563 Phosphate acyltransferases AE940_RS10500 SM00060 Fibronectin type 3 domain AE940_RS10530 SM00729 Elongator protein 3, MiaB family, Radical SAM AE940_RS10535 SM00487 DEAD-like helicases superfamily AE940_RS10535 SM00490 helicase superfamily c-terminal domain AE940_RS10535 SM00982 AE940_RS10535 AE940_RS10535 SM01058 CarD-like/TRCF domain AE940_RS10615 SM00382 ATPases associated with a variety of cellular activities AE940_RS10620 SM00382 ATPases associated with a variety of cellular activities AE940_RS10640 SM00563 Phosphate acyltransferases AE940_RS10880 SM00886 Stress responsive A/B Barrel Domain AE940_RS10890 SM00062 Bacterial periplasmic substrate-binding proteins AE940_RS10905 SM01018 B12 binding domain AE940_RS10950 SM00642 Alpha-amylase domain AE940_RS10970 SM00357 Cold shock protein domain AE940_RS10970 SM00382 ATPases associated with a variety of cellular activities AE940_RS10970 SM00959 Rho termination factor, N-terminal domain AE940_RS10975 SM00387 Histidine kinase-like ATPases AE940_RS10975 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS10980 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS10990 SM00382 ATPases associated with a variety of cellular activities AE940_RS10990 SM00962 SRP54-type protein, GTPase domain AE940_RS10990 SM00963 SRP54-type protein, helical bundle domain AE940_RS11015 SM00854 Bacterial capsule synthesis protein PGA_cap AE940_RS11035 SM00382 ATPases associated with a variety of cellular activities AE940_RS11070 SM00382 ATPases associated with a variety of cellular activities AE940_RS11095 SM00850 LytTr DNA-binding domain AE940_RS11100 SM00935 Outer membrane protein (OmpH-like) AE940_RS11130 SM00812 Alpha-L-fucosidase AE940_RS11135 SM01038 Beta galactosidase small chain AE940_RS11160 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS11165 SM01133 AE940_RS11165 AE940_RS11170 SM00855 Phosphoglycerate mutase family AE940_RS11175 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AE940_RS11175 SM00710 Parallel beta-helix repeats AE940_RS11180 SM00382 ATPases associated with a variety of cellular activities AE940_RS11215 SM00642 Alpha-amylase domain AE940_RS11250 SM00478 endonuclease III AE940_RS11250 SM00525 AE940_RS11250 AE940_RS11275 SM00028 Tetratricopeptide repeats AE940_RS11340 SM00947 Carbonic anhydrase AE940_RS11375 SM00028 Tetratricopeptide repeats AE940_RS11380 SM00028 Tetratricopeptide repeats AE940_RS11385 SM00642 Alpha-amylase domain AE940_RS11390 SM00347 helix_turn_helix multiple antibiotic resistance protein AE940_RS11430 SM00642 Alpha-amylase domain AE940_RS11450 SM00354 helix_turn _helix lactose operon repressor AE940_RS11485 SM01211 AE940_RS11485 AE940_RS11490 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS11490 SM00387 Histidine kinase-like ATPases AE940_RS11490 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS11490 SM00448 cheY-homologous receiver domain AE940_RS11535 SM00387 Histidine kinase-like ATPases AE940_RS11535 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS11545 SM00382 ATPases associated with a variety of cellular activities AE940_RS11555 SM00890 Domain of unknown function AE940_RS11575 SM00116 Domain in cystathionine beta-synthase and other proteins. AE940_RS11575 SM00382 ATPases associated with a variety of cellular activities AE940_RS11585 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS11585 SM00387 Histidine kinase-like ATPases AE940_RS11585 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS11585 SM00448 cheY-homologous receiver domain AE940_RS11600 SM00640 Glycosyl hydrolases family 32 AE940_RS11610 SM00530 Helix-turn-helix XRE-family like proteins AE940_RS11655 SM00612 AE940_RS11655 AE940_RS11690 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS11700 SM00448 cheY-homologous receiver domain AE940_RS11700 SM00850 LytTr DNA-binding domain AE940_RS11725 SM00812 Alpha-L-fucosidase AE940_RS11730 SM00893 Electron transfer flavoprotein domain AE940_RS11735 SM00893 Electron transfer flavoprotein domain AE940_RS11745 SM01038 Beta galactosidase small chain AE940_RS11755 SM00271 DnaJ molecular chaperone homology domain AE940_RS11760 SM00387 Histidine kinase-like ATPases AE940_RS11760 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS11840 SM00883 Chaperonin 10 Kd subunit AE940_RS11945 SM00812 Alpha-L-fucosidase AE940_RS11950 SM00788 Adenylosuccinate synthetase AE940_RS11975 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS11980 SM00341 Helicase and RNase D C-terminal AE940_RS11980 SM00487 DEAD-like helicases superfamily AE940_RS11980 SM00490 helicase superfamily c-terminal domain AE940_RS11980 SM00956 AE940_RS11980 AE940_RS11985 SM00028 Tetratricopeptide repeats AE940_RS12000 SM00014 Acid phosphatase homologues AE940_RS12040 SM01259 AE940_RS12040 AE940_RS12050 SM01329 AE940_RS12050 AE940_RS12055 SM00917 LeuA allosteric (dimerisation) domain AE940_RS12070 SM00917 LeuA allosteric (dimerisation) domain AE940_RS12255 SM01266 AE940_RS12255 AE940_RS12265 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS12270 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS12270 SM00387 Histidine kinase-like ATPases AE940_RS12270 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS12270 SM00448 cheY-homologous receiver domain AE940_RS12325 SM00986 Uracil DNA glycosylase superfamily AE940_RS12325 SM00987 UreE urease accessory protein, C-terminal domain AE940_RS12330 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS12330 SM00871 Bacterial transcription activator, effector binding domain AE940_RS12410 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS12420 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS12440 SM00878 Biotin carboxylase C-terminal domain AE940_RS12465 SM01240 AE940_RS12465 AE940_RS12480 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS12505 SM00646 AE940_RS12505 AE940_RS12690 SM00327 von Willebrand factor (vWF) type A domain AE940_RS12755 SM00322 K homology RNA-binding domain AE940_RS12755 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AE940_RS12770 SM00919 Malic enzyme, NAD binding domain AE940_RS12770 SM01274 AE940_RS12770 AE940_RS12775 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AE940_RS12790 SM00965 Secretin and TonB N terminus short domain AE940_RS12840 SM00530 Helix-turn-helix XRE-family like proteins AE940_RS12910 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AE940_RS12930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AE940_RS12965 SM00357 Cold shock protein domain AE940_RS13100 SM00530 Helix-turn-helix XRE-family like proteins AE940_RS13115 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AE940_RS13205 SM00072 Guanylate kinase homologues. AE940_RS13250 SM00448 cheY-homologous receiver domain AE940_RS13255 SM00382 ATPases associated with a variety of cellular activities AE940_RS13315 SM00155 Phospholipase D. Active site motifs. AE940_RS13330 SM00344 helix_turn_helix ASNC type AE940_RS13420 SM01329 AE940_RS13420 AE940_RS13495 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS13545 SM00564 beta-propeller repeat AE940_RS13590 SM00965 Secretin and TonB N terminus short domain AE940_RS13635 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AE940_RS13635 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AE940_RS13635 SM00493 AE940_RS13635 AE940_RS13640 SM00812 Alpha-L-fucosidase AE940_RS13725 SM00986 Uracil DNA glycosylase superfamily AE940_RS13725 SM00987 UreE urease accessory protein, C-terminal domain AE940_RS13740 SM00758 AE940_RS13740 AE940_RS13755 SM00646 AE940_RS13755 AE940_RS13765 SM00382 ATPases associated with a variety of cellular activities AE940_RS13765 SM00760 Bacterial dnaA protein helix-turn-helix domain AE940_RS13780 SM01065 Starch binding domain AE940_RS13790 SM00905 Dihydroneopterin aldolase AE940_RS13800 SM00851 MGS-like domain AE940_RS13815 SM00729 Elongator protein 3, MiaB family, Radical SAM AE940_RS13845 SM00347 helix_turn_helix multiple antibiotic resistance protein AE940_RS13850 SM00448 cheY-homologous receiver domain AE940_RS13850 SM00862 Transcriptional regulatory protein, C terminal AE940_RS13855 SM00387 Histidine kinase-like ATPases AE940_RS13855 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS13860 SM00838 Elongation factor G C-terminus AE940_RS13860 SM00889 Elongation factor G, domain IV AE940_RS13870 SM00729 Elongator protein 3, MiaB family, Radical SAM AE940_RS13890 SM00965 Secretin and TonB N terminus short domain AE940_RS13965 SM00448 cheY-homologous receiver domain AE940_RS13965 SM00850 LytTr DNA-binding domain AE940_RS13975 SM00729 Elongator protein 3, MiaB family, Radical SAM AE940_RS13975 SM00876 Biotin and Thiamin Synthesis associated domain AE940_RS13980 SM00876 Biotin and Thiamin Synthesis associated domain AE940_RS14030 SM00116 Domain in cystathionine beta-synthase and other proteins. AE940_RS14105 SM00984 UDP binding domain AE940_RS14155 SM00487 DEAD-like helicases superfamily AE940_RS14155 SM00490 helicase superfamily c-terminal domain AE940_RS14160 SM00028 Tetratricopeptide repeats AE940_RS14190 SM01130 AE940_RS14190 AE940_RS14195 SM00345 helix_turn_helix gluconate operon transcriptional repressor AE940_RS14195 SM00895 AE940_RS14195 AE940_RS14210 SM00830 Chorismate mutase type II AE940_RS14225 SM00400 zinc finger AE940_RS14225 SM00493 AE940_RS14225 AE940_RS14285 SM00257 Lysin motif AE940_RS14290 SM00562 AE940_RS14290 AE940_RS14295 SM00487 DEAD-like helicases superfamily AE940_RS14295 SM00490 helicase superfamily c-terminal domain AE940_RS14395 SM00560 LamG-like jellyroll fold domain AE940_RS14500 SM00849 Metallo-beta-lactamase superfamily AE940_RS14555 SM00881 CoA binding domain AE940_RS14595 SM00363 S4 RNA-binding domain AE940_RS14625 SM01266 AE940_RS14625 AE940_RS14690 SM00851 MGS-like domain AE940_RS14690 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AE940_RS14710 SM00382 ATPases associated with a variety of cellular activities AE940_RS14805 SM00028 Tetratricopeptide repeats AE940_RS14865 SM00213 Ubiquitin homologues AE940_RS14875 SM00853 MutL C terminal dimerisation domain AE940_RS14875 SM01340 AE940_RS14875 AE940_RS14905 SM00116 Domain in cystathionine beta-synthase and other proteins. AE940_RS14905 SM01240 AE940_RS14905 AE940_RS14910 SM00341 Helicase and RNase D C-terminal AE940_RS14910 SM00487 DEAD-like helicases superfamily AE940_RS14910 SM00490 helicase superfamily c-terminal domain AE940_RS14910 SM00956 AE940_RS14910 AE940_RS14915 SM00382 ATPases associated with a variety of cellular activities AE940_RS14915 SM00994 ClpX C4-type zinc finger AE940_RS14915 SM01086 C-terminal, D2-small domain, of ClpB protein AE940_RS14935 SM00360 RNA recognition motif AE940_RS14940 SM00382 ATPases associated with a variety of cellular activities AE940_RS14950 SM00382 ATPases associated with a variety of cellular activities AE940_RS14955 SM00421 helix_turn_helix, Lux Regulon AE940_RS14955 SM00448 cheY-homologous receiver domain AE940_RS15055 SM00798 AICARFT/IMPCHase bienzyme AE940_RS15055 SM00851 MGS-like domain AE940_RS15065 SM00382 ATPases associated with a variety of cellular activities AE940_RS15090 SM00387 Histidine kinase-like ATPases AE940_RS15090 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS15090 SM00448 cheY-homologous receiver domain AE940_RS15110 SM00382 ATPases associated with a variety of cellular activities AE940_RS15110 SM00448 cheY-homologous receiver domain AE940_RS15125 SM00822 AE940_RS15125 AE940_RS15150 SM00382 ATPases associated with a variety of cellular activities AE940_RS15165 SM00345 helix_turn_helix gluconate operon transcriptional repressor AE940_RS15175 SM00382 ATPases associated with a variety of cellular activities AE940_RS15180 SM00028 Tetratricopeptide repeats AE940_RS15350 SM01221 AE940_RS15350 AE940_RS15350 SM01222 AE940_RS15350 AE940_RS15365 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AE940_RS15365 SM00534 ATPase domain of DNA mismatch repair MUTS family AE940_RS15385 SM00662 RNA polymerases D AE940_RS15390 SM00363 S4 RNA-binding domain AE940_RS15390 SM01390 AE940_RS15390 AE940_RS15405 SM00316 Ribosomal protein S1-like RNA-binding domain AE940_RS15460 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AE940_RS15465 SM01374 AE940_RS15465 AE940_RS15485 SM00322 K homology RNA-binding domain AE940_RS15500 SM01382 AE940_RS15500 AE940_RS15500 SM01383 AE940_RS15500 AE940_RS15520 SM01403 AE940_RS15520 AE940_RS15525 SM00838 Elongation factor G C-terminus AE940_RS15525 SM00889 Elongation factor G, domain IV AE940_RS15565 SM00663 RNA polymerase I subunit A N-terminus AE940_RS15590 SM00649 Ribosomal protein L11/L12 AE940_RS15595 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AE940_RS15595 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AE940_RS15670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AE940_RS15675 SM00226 Low molecular weight phosphatase family AE940_RS15685 SM00487 DEAD-like helicases superfamily AE940_RS15685 SM00490 helicase superfamily c-terminal domain AE940_RS15710 SM00870 AE940_RS15710 AE940_RS15725 SM00530 Helix-turn-helix XRE-family like proteins AE940_RS15850 SM00448 cheY-homologous receiver domain AE940_RS15850 SM00850 LytTr DNA-binding domain AE940_RS15880 SM01266 AE940_RS15880 AE940_RS15885 SM00421 helix_turn_helix, Lux Regulon AE940_RS15900 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS15905 SM00861 Transketolase, pyrimidine binding domain AE940_RS15985 SM00316 Ribosomal protein S1-like RNA-binding domain AE940_RS15985 SM00322 K homology RNA-binding domain AE940_RS16000 SM00965 Secretin and TonB N terminus short domain AE940_RS16055 SM00530 Helix-turn-helix XRE-family like proteins AE940_RS16070 SM00904 Riboflavin kinase AE940_RS16080 SM00831 Cation transporter/ATPase, N-terminus AE940_RS16085 SM00387 Histidine kinase-like ATPases AE940_RS16085 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS16085 SM00448 cheY-homologous receiver domain AE940_RS16105 SM00387 Histidine kinase-like ATPases AE940_RS16130 SM01011 Aminopeptidase P, N-terminal domain AE940_RS16150 SM01001 AIR carboxylase AE940_RS16185 SM01217 AE940_RS16185 AE940_RS16195 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AE940_RS16195 SM00245 tail specific protease AE940_RS16240 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS16240 SM00387 Histidine kinase-like ATPases AE940_RS16240 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS16240 SM00448 cheY-homologous receiver domain AE940_RS16385 SM00850 LytTr DNA-binding domain AE940_RS16410 SM00028 Tetratricopeptide repeats AE940_RS16410 SM00671 Sel1-like repeats. AE940_RS16420 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AE940_RS16420 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AE940_RS16420 SM00493 AE940_RS16420 AE940_RS16430 SM00836 DALR anticodon binding domain AE940_RS16430 SM01016 Arginyl tRNA synthetase N terminal dom AE940_RS16435 SM00411 bacterial (prokaryotic) histone like domain AE940_RS16465 SM00411 bacterial (prokaryotic) histone like domain AE940_RS16500 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS16560 SM00710 Parallel beta-helix repeats AE940_RS16590 SM00838 Elongation factor G C-terminus AE940_RS16595 SM01387 AE940_RS16595 AE940_RS16600 SM00530 Helix-turn-helix XRE-family like proteins AE940_RS16610 SM00091 PAS domain AE940_RS16610 SM00387 Histidine kinase-like ATPases AE940_RS16610 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS16615 SM00996 S-adenosyl-L-homocysteine hydrolase AE940_RS16615 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AE940_RS16640 SM00965 Secretin and TonB N terminus short domain AE940_RS16650 SM00421 helix_turn_helix, Lux Regulon AE940_RS16695 SM00382 ATPases associated with a variety of cellular activities AE940_RS16715 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS16715 SM00387 Histidine kinase-like ATPases AE940_RS16715 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS16715 SM00448 cheY-homologous receiver domain AE940_RS16730 SM00881 CoA binding domain AE940_RS16805 SM00984 UDP binding domain AE940_RS16835 SM00344 helix_turn_helix ASNC type AE940_RS16850 SM00448 cheY-homologous receiver domain AE940_RS16850 SM00850 LytTr DNA-binding domain AE940_RS16965 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS16965 SM00387 Histidine kinase-like ATPases AE940_RS16965 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS16965 SM00448 cheY-homologous receiver domain AE940_RS17000 SM00387 Histidine kinase-like ATPases AE940_RS17000 SM00433 TopoisomeraseII AE940_RS17010 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AE940_RS17010 SM00245 tail specific protease AE940_RS17015 SM00014 Acid phosphatase homologues AE940_RS17020 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS17055 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS17115 SM00316 Ribosomal protein S1-like RNA-binding domain AE940_RS17115 SM00955 AE940_RS17115 AE940_RS17170 SM01059 Chloramphenicol acetyltransferase AE940_RS17175 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AE940_RS17175 SM00534 ATPase domain of DNA mismatch repair MUTS family AE940_RS17255 SM00382 ATPases associated with a variety of cellular activities AE940_RS17335 SM00729 Elongator protein 3, MiaB family, Radical SAM AE940_RS17340 SM00812 Alpha-L-fucosidase AE940_RS17350 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS17355 SM00862 Transcriptional regulatory protein, C terminal AE940_RS17620 SM00382 ATPases associated with a variety of cellular activities AE940_RS17645 SM01209 AE940_RS17645 AE940_RS17645 SM01210 AE940_RS17645 AE940_RS17655 SM00981 AE940_RS17655 AE940_RS17665 SM00028 Tetratricopeptide repeats AE940_RS17670 SM00448 cheY-homologous receiver domain AE940_RS17670 SM00850 LytTr DNA-binding domain AE940_RS17680 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AE940_RS17680 SM00474 3'-5' exonuclease AE940_RS17680 SM00475 5'-3' exonuclease AE940_RS17680 SM00482 DNA polymerase A domain AE940_RS17695 SM01133 AE940_RS17695 AE940_RS17710 SM00465 GIY-YIG type nucleases (URI domain) AE940_RS17720 SM01228 AE940_RS17720 AE940_RS17725 SM00028 Tetratricopeptide repeats AE940_RS17775 SM00382 ATPases associated with a variety of cellular activities AE940_RS17805 SM00487 DEAD-like helicases superfamily AE940_RS17805 SM00490 helicase superfamily c-terminal domain AE940_RS17850 SM00822 AE940_RS17850 AE940_RS17920 SM01038 Beta galactosidase small chain AE940_RS17940 SM00840 AE940_RS17940 AE940_RS17950 SM00448 cheY-homologous receiver domain AE940_RS17950 SM00862 Transcriptional regulatory protein, C terminal AE940_RS17955 SM00387 Histidine kinase-like ATPases AE940_RS17955 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS17965 SM00448 cheY-homologous receiver domain AE940_RS17965 SM00862 Transcriptional regulatory protein, C terminal AE940_RS17970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AE940_RS17970 SM00387 Histidine kinase-like ATPases AE940_RS17970 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS17975 SM00831 Cation transporter/ATPase, N-terminus AE940_RS17990 SM00487 DEAD-like helicases superfamily AE940_RS17990 SM00490 helicase superfamily c-terminal domain AE940_RS18010 SM00358 Double-stranded RNA binding motif AE940_RS18010 SM00535 Ribonuclease III family AE940_RS18015 SM00825 Beta-ketoacyl synthase AE940_RS18020 SM00823 Phosphopantetheine attachment site AE940_RS18050 SM00672 Putative lipopolysaccharide-modifying enzyme. AE940_RS18065 SM00382 ATPases associated with a variety of cellular activities AE940_RS18105 SM00671 Sel1-like repeats. AE940_RS18185 SM00345 helix_turn_helix gluconate operon transcriptional repressor AE940_RS18200 SM01007 Class II Aldolase and Adducin N-terminal domain AE940_RS18245 SM00382 ATPases associated with a variety of cellular activities AE940_RS18275 SM00965 Secretin and TonB N terminus short domain AE940_RS18325 SM00387 Histidine kinase-like ATPases AE940_RS18325 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS18330 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS18345 SM00387 Histidine kinase-like ATPases AE940_RS18345 SM00433 TopoisomeraseII AE940_RS18370 SM00864 Tubulin/FtsZ family, GTPase domain AE940_RS18370 SM00865 Tubulin/FtsZ family, C-terminal domain AE940_RS18375 SM00842 Cell division protein FtsA AE940_RS18415 SM00740 AE940_RS18415 AE940_RS18465 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AE940_RS18475 SM00028 Tetratricopeptide repeats AE940_RS18490 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS18490 SM00387 Histidine kinase-like ATPases AE940_RS18490 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS18490 SM00448 cheY-homologous receiver domain AE940_RS18500 SM00758 AE940_RS18500 AE940_RS18500 SM01217 AE940_RS18500 AE940_RS18545 SM00872 Alpha mannosidase, middle domain AE940_RS18605 SM01149 AE940_RS18605 AE940_RS18620 SM00560 LamG-like jellyroll fold domain AE940_RS18620 SM00606 Cellulose Binding Domain Type IV AE940_RS18660 SM00813 Alpha-L-arabinofuranosidase C-terminus AE940_RS18680 SM00937 AE940_RS18680 AE940_RS18690 SM01118 AE940_RS18690 AE940_RS18745 SM00342 helix_turn_helix, arabinose operon control protein AE940_RS18745 SM00387 Histidine kinase-like ATPases AE940_RS18745 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS18745 SM00448 cheY-homologous receiver domain AE940_RS18765 SM01217 AE940_RS18765 AE940_RS18785 SM00530 Helix-turn-helix XRE-family like proteins AE940_RS18820 SM00245 tail specific protease AE940_RS18830 SM00434 DNA Topoisomerase IV AE940_RS18855 SM00028 Tetratricopeptide repeats AE940_RS18890 SM00419 helix_turn_helix, cAMP Regulatory protein AE940_RS18945 SM00564 beta-propeller repeat AE940_RS18985 SM00859 Semialdehyde dehydrogenase, NAD binding domain AE940_RS19000 SM00382 ATPases associated with a variety of cellular activities AE940_RS19040 SM00028 Tetratricopeptide repeats AE940_RS19040 SM00387 Histidine kinase-like ATPases AE940_RS19040 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS19185 SM00098 Alkaline phosphatase homologues AE940_RS19210 SM00841 Elongation factor P, C-terminal AE940_RS19210 SM01185 AE940_RS19210 AE940_RS19215 SM00740 AE940_RS19215 AE940_RS19220 SM00363 S4 RNA-binding domain AE940_RS19240 SM00450 Rhodanese Homology Domain AE940_RS19265 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AE940_RS19280 SM00935 Outer membrane protein (OmpH-like) AE940_RS19285 SM00935 Outer membrane protein (OmpH-like) AE940_RS19360 SM00530 Helix-turn-helix XRE-family like proteins AE940_RS19375 SM00859 Semialdehyde dehydrogenase, NAD binding domain AE940_RS19405 SM00387 Histidine kinase-like ATPases AE940_RS19405 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS19450 SM00534 ATPase domain of DNA mismatch repair MUTS family AE940_RS19475 SM00965 Secretin and TonB N terminus short domain AE940_RS19510 SM00382 ATPases associated with a variety of cellular activities AE940_RS19575 SM00347 helix_turn_helix multiple antibiotic resistance protein AE940_RS19580 SM00450 Rhodanese Homology Domain AE940_RS19590 SM00382 ATPases associated with a variety of cellular activities AE940_RS19590 SM00448 cheY-homologous receiver domain AE940_RS19620 SM00091 PAS domain AE940_RS19620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AE940_RS19620 SM00387 Histidine kinase-like ATPases AE940_RS19620 SM00388 His Kinase A (phosphoacceptor) domain AE940_RS19635 SM00965 Secretin and TonB N terminus short domain AE940_RS19720 SM00421 helix_turn_helix, Lux Regulon AE940_RS19735 SM00382 ATPases associated with a variety of cellular activities AE940_RS19745 SM00870 AE940_RS19745