locus-tag class description DYI28_RS00005 PF01545 Cation efflux family DYI28_RS00010 PF02080 TrkA-C domain DYI28_RS00010 PF06826 Predicted Permease Membrane Region DYI28_RS00020 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS00020 PF00593 TonB dependent receptor DYI28_RS00030 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS00030 PF00593 TonB dependent receptor DYI28_RS00040 PF00728 Glycosyl hydrolase family 20, catalytic domain DYI28_RS00040 PF07691 PA14 domain DYI28_RS00040 PF02838 Glycosyl hydrolase family 20, domain 2 DYI28_RS00045 PF04954 Siderophore-interacting protein DYI28_RS00045 PF08021 Siderophore-interacting FAD-binding domain DYI28_RS00045 PF00005 ABC transporter DYI28_RS00045 PF00664 ABC transporter transmembrane region DYI28_RS00050 PF00005 ABC transporter DYI28_RS00050 PF00664 ABC transporter transmembrane region DYI28_RS00055 PF00440 Bacterial regulatory proteins, tetR family DYI28_RS00060 PF01578 Cytochrome C assembly protein DYI28_RS00060 PF05140 ResB-like family DYI28_RS00085 PF09375 Imelysin DYI28_RS00100 PF00258 Flavodoxin DYI28_RS00105 PF02142 MGS-like domain DYI28_RS00105 PF01808 AICARFT/IMPCHase bienzyme DYI28_RS00115 PF00196 Bacterial regulatory proteins, luxR family DYI28_RS00115 PF00072 Response regulator receiver domain DYI28_RS00120 PF00132 Bacterial transferase hexapeptide (six repeats) DYI28_RS00120 PF14602 Hexapeptide repeat of succinyl-transferase DYI28_RS00120 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal DYI28_RS00130 PF02397 Bacterial sugar transferase DYI28_RS00135 PF00486 Transcriptional regulatory protein, C terminal DYI28_RS00135 PF00072 Response regulator receiver domain DYI28_RS00145 PF00710 Asparaginase, N-terminal DYI28_RS00145 PF17763 Glutaminase/Asparaginase C-terminal domain DYI28_RS00155 PF00290 Tryptophan synthase alpha chain DYI28_RS00160 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DYI28_RS00165 PF00218 Indole-3-glycerol phosphate synthase DYI28_RS00170 PF02885 Glycosyl transferase family, helical bundle domain DYI28_RS00170 PF00591 Glycosyl transferase family, a/b domain DYI28_RS00175 PF00117 Glutamine amidotransferase class-I DYI28_RS00180 PF04715 Anthranilate synthase component I, N terminal region DYI28_RS00180 PF00425 chorismate binding enzyme DYI28_RS00185 PF00291 Pyridoxal-phosphate dependent enzyme DYI28_RS00200 PF00465 Iron-containing alcohol dehydrogenase DYI28_RS00205 PF09308 LuxQ, periplasmic DYI28_RS00205 PF00072 Response regulator receiver domain DYI28_RS00205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS00205 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS00210 PF02080 TrkA-C domain DYI28_RS00210 PF03600 Citrate transporter DYI28_RS00230 PF13090 Polyphosphate kinase C-terminal domain 2 DYI28_RS00230 PF17941 Polyphosphate kinase C-terminal domain 1 DYI28_RS00230 PF13089 Polyphosphate kinase N-terminal domain DYI28_RS00230 PF02503 Polyphosphate kinase middle domain DYI28_RS00240 PF00120 Glutamine synthetase, catalytic domain DYI28_RS00240 PF18318 Glutamine synthetase C-terminal domain DYI28_RS00240 PF12437 Glutamine synthetase type III N terminal DYI28_RS00245 PF00909 Ammonium Transporter Family DYI28_RS00250 PF00543 Nitrogen regulatory protein P-II DYI28_RS00260 PF00155 Aminotransferase class I and II DYI28_RS00265 PF01678 Diaminopimelate epimerase DYI28_RS00285 PF00733 Asparagine synthase DYI28_RS00285 PF13537 Glutamine amidotransferase domain DYI28_RS00290 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYI28_RS00290 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DYI28_RS00295 PF01493 GXGXG motif DYI28_RS00295 PF00310 Glutamine amidotransferases class-II DYI28_RS00295 PF01645 Conserved region in glutamate synthase DYI28_RS00295 PF04898 Glutamate synthase central domain DYI28_RS00300 PF01380 SIS domain DYI28_RS00305 PF00156 Phosphoribosyl transferase domain DYI28_RS00310 PF00117 Glutamine amidotransferase class-I DYI28_RS00310 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DYI28_RS00315 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DYI28_RS00315 PF02142 MGS-like domain DYI28_RS00315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DYI28_RS00325 PF01050 Mannose-6-phosphate isomerase DYI28_RS00325 PF00483 Nucleotidyl transferase DYI28_RS00330 PF12833 Helix-turn-helix domain DYI28_RS00330 PF02311 AraC-like ligand binding domain DYI28_RS00340 PF13533 Biotin-lipoyl like DYI28_RS00345 PF00005 ABC transporter DYI28_RS00365 PF02272 DHHA1 domain DYI28_RS00365 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DYI28_RS00365 PF01411 tRNA synthetases class II (A) DYI28_RS00375 PF02698 DUF218 domain DYI28_RS00395 PF12344 Ultra-violet resistance protein B DYI28_RS00395 PF04851 Type III restriction enzyme, res subunit DYI28_RS00395 PF00271 Helicase conserved C-terminal domain DYI28_RS00395 PF17757 UvrB interaction domain DYI28_RS00395 PF02151 UvrB/uvrC motif DYI28_RS00400 PF14535 AMP-binding enzyme C-terminal domain DYI28_RS00400 PF00501 AMP-binding enzyme DYI28_RS00430 PF01476 LysM domain DYI28_RS00430 PF05257 CHAP domain DYI28_RS00435 PF17760 UvrA interaction domain DYI28_RS00435 PF17755 UvrA DNA-binding domain DYI28_RS00440 PF04073 Aminoacyl-tRNA editing domain DYI28_RS00460 PF04024 PspC domain DYI28_RS00465 PF12706 Beta-lactamase superfamily domain DYI28_RS00475 PF00326 Prolyl oligopeptidase family DYI28_RS00475 PF07676 WD40-like Beta Propeller Repeat DYI28_RS00475 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DYI28_RS00480 PF01554 MatE DYI28_RS00485 PF02096 60Kd inner membrane protein DYI28_RS00485 PF14849 YidC periplasmic domain DYI28_RS00490 PF00117 Glutamine amidotransferase class-I DYI28_RS00490 PF06418 CTP synthase N-terminus DYI28_RS00545 PF00534 Glycosyl transferases group 1 DYI28_RS00545 PF13439 Glycosyltransferase Family 4 DYI28_RS00550 PF04101 Glycosyltransferase family 28 C-terminal domain DYI28_RS00550 PF03033 Glycosyltransferase family 28 N-terminal domain DYI28_RS00555 PF01370 NAD dependent epimerase/dehydratase family DYI28_RS00560 PF00535 Glycosyl transferase family 2 DYI28_RS00565 PF02397 Bacterial sugar transferase DYI28_RS00575 PF13614 AAA domain DYI28_RS00605 PF08011 PD-(D/E)XK nuclease superfamily DYI28_RS00605 PF09820 Predicted AAA-ATPase DYI28_RS00610 PF09820 Predicted AAA-ATPase DYI28_RS00610 PF08011 PD-(D/E)XK nuclease superfamily DYI28_RS00620 PF04060 Putative Fe-S cluster DYI28_RS00625 PF13237 4Fe-4S dicluster domain DYI28_RS00625 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DYI28_RS00625 PF13375 RnfC Barrel sandwich hybrid domain DYI28_RS00625 PF10531 SLBB domain DYI28_RS00630 PF03116 NQR2, RnfD, RnfE family DYI28_RS00635 PF04205 FMN-binding domain DYI28_RS00640 PF02508 Rnf-Nqr subunit, membrane protein DYI28_RS00645 PF02508 Rnf-Nqr subunit, membrane protein DYI28_RS00650 PF16363 GDP-mannose 4,6 dehydratase DYI28_RS00655 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system DYI28_RS00665 PF00288 GHMP kinases N terminal domain DYI28_RS00665 PF08544 GHMP kinases C terminal DYI28_RS00670 PF00772 DnaB-like helicase N terminal domain DYI28_RS00670 PF03796 DnaB-like helicase C terminal domain DYI28_RS00675 PF03147 Ferredoxin-fold anticodon binding domain DYI28_RS00675 PF03484 tRNA synthetase B5 domain DYI28_RS00675 PF03483 B3/4 domain DYI28_RS00675 PF01588 Putative tRNA binding domain DYI28_RS00675 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DYI28_RS00680 PF01709 Transcriptional regulator DYI28_RS00690 PF01566 Natural resistance-associated macrophage protein DYI28_RS00695 PF03372 Endonuclease/Exonuclease/phosphatase family DYI28_RS00700 PF01894 Uncharacterised protein family UPF0047 DYI28_RS00720 PF00679 Elongation factor G C-terminus DYI28_RS00720 PF00009 Elongation factor Tu GTP binding domain DYI28_RS00720 PF03144 Elongation factor Tu domain 2 DYI28_RS00720 PF06421 GTP-binding protein LepA C-terminus DYI28_RS00730 PF06965 Na+/H+ antiporter 1 DYI28_RS00735 PF02646 RmuC family DYI28_RS00740 PF00557 Metallopeptidase family M24 DYI28_RS00760 PF00849 RNA pseudouridylate synthase DYI28_RS00765 PF05958 tRNA (Uracil-5-)-methyltransferase DYI28_RS00765 PF01938 TRAM domain DYI28_RS00775 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DYI28_RS00775 PF02896 PEP-utilising enzyme, TIM barrel domain DYI28_RS00775 PF00391 PEP-utilising enzyme, mobile domain DYI28_RS00790 PF02581 Thiamine monophosphate synthase DYI28_RS00795 PF00899 ThiF family DYI28_RS00800 PF04055 Radical SAM superfamily DYI28_RS00800 PF06968 Biotin and Thiamin Synthesis associated domain DYI28_RS00805 PF01964 Radical SAM ThiC family DYI28_RS00805 PF13667 ThiC-associated domain DYI28_RS00810 PF05690 Thiazole biosynthesis protein ThiG DYI28_RS00815 PF02581 Thiamine monophosphate synthase DYI28_RS00825 PF00672 HAMP domain DYI28_RS00825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS00825 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS00825 PF13426 PAS domain DYI28_RS00830 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DYI28_RS00830 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DYI28_RS00840 PF13361 UvrD-like helicase C-terminal domain DYI28_RS00840 PF00580 UvrD/REP helicase N-terminal domain DYI28_RS00860 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DYI28_RS00895 PF01979 Amidohydrolase family DYI28_RS00900 PF01979 Amidohydrolase family DYI28_RS00905 PF00085 Thioredoxin DYI28_RS00915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYI28_RS00915 PF00529 HlyD membrane-fusion protein of T1SS DYI28_RS00920 PF00873 AcrB/AcrD/AcrF family DYI28_RS00925 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS00925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS00925 PF18719 ArlS sensor domain DYI28_RS00930 PF00072 Response regulator receiver domain DYI28_RS00930 PF00486 Transcriptional regulatory protein, C terminal DYI28_RS00935 PF14508 Glycosyl-hydrolase 97 N-terminal DYI28_RS00935 PF10566 Glycoside hydrolase 97 DYI28_RS00935 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation DYI28_RS00940 PF13193 AMP-binding enzyme C-terminal domain DYI28_RS00940 PF00501 AMP-binding enzyme DYI28_RS00945 PF00999 Sodium/hydrogen exchanger family DYI28_RS00945 PF02080 TrkA-C domain DYI28_RS00945 PF03471 Transporter associated domain DYI28_RS00950 PF00860 Permease family DYI28_RS00955 PF03063 Prismane/CO dehydrogenase family DYI28_RS00965 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS00970 PF02954 Bacterial regulatory protein, Fis family DYI28_RS00970 PF00158 Sigma-54 interaction domain DYI28_RS00970 PF00072 Response regulator receiver domain DYI28_RS00990 PF00005 ABC transporter DYI28_RS00990 PF12704 MacB-like periplasmic core domain DYI28_RS00990 PF02687 FtsX-like permease family DYI28_RS01000 PF01554 MatE DYI28_RS01005 PF13419 Haloacid dehalogenase-like hydrolase DYI28_RS01010 PF02548 Ketopantoate hydroxymethyltransferase DYI28_RS01020 PF13291 ACT domain DYI28_RS01020 PF04607 Region found in RelA / SpoT proteins DYI28_RS01020 PF02824 TGS domain DYI28_RS01030 PF00302 Chloramphenicol acetyltransferase DYI28_RS01045 PF01757 Acyltransferase family DYI28_RS01050 PF13673 Acetyltransferase (GNAT) domain DYI28_RS01055 PF02222 ATP-grasp domain DYI28_RS01060 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYI28_RS01060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYI28_RS01065 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DYI28_RS01075 PF00119 ATP synthase A chain DYI28_RS01080 PF00137 ATP synthase subunit C DYI28_RS01085 PF00430 ATP synthase B/B' CF(0) DYI28_RS01090 PF00213 ATP synthase delta (OSCP) subunit DYI28_RS01095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYI28_RS01095 PF00306 ATP synthase alpha/beta chain, C terminal domain DYI28_RS01095 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYI28_RS01100 PF00231 ATP synthase DYI28_RS01105 PF05970 PIF1-like helicase DYI28_RS01110 PF03956 Lysine exporter LysO DYI28_RS01120 PF01370 NAD dependent epimerase/dehydratase family DYI28_RS01120 PF02911 Formyl transferase, C-terminal domain DYI28_RS01120 PF00551 Formyl transferase DYI28_RS01125 PF01139 tRNA-splicing ligase RtcB DYI28_RS01140 PF12833 Helix-turn-helix domain DYI28_RS01145 PF12833 Helix-turn-helix domain DYI28_RS01165 PF00072 Response regulator receiver domain DYI28_RS01165 PF00486 Transcriptional regulatory protein, C terminal DYI28_RS01170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS01170 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS01180 PF00155 Aminotransferase class I and II DYI28_RS01185 PF06826 Predicted Permease Membrane Region DYI28_RS01190 PF01268 Formate--tetrahydrofolate ligase DYI28_RS01195 PF00464 Serine hydroxymethyltransferase DYI28_RS01205 PF01613 Flavin reductase like domain DYI28_RS01210 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain DYI28_RS01210 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain DYI28_RS01215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DYI28_RS01215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DYI28_RS01235 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS01235 PF00589 Phage integrase family DYI28_RS01255 PF00535 Glycosyl transferase family 2 DYI28_RS01270 PF04230 Polysaccharide pyruvyl transferase DYI28_RS01280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYI28_RS01295 PF00132 Bacterial transferase hexapeptide (six repeats) DYI28_RS01295 PF12464 Maltose acetyltransferase DYI28_RS01305 PF00534 Glycosyl transferases group 1 DYI28_RS01305 PF13439 Glycosyltransferase Family 4 DYI28_RS01315 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DYI28_RS01315 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DYI28_RS01315 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DYI28_RS01325 PF00534 Glycosyl transferases group 1 DYI28_RS01335 PF02397 Bacterial sugar transferase DYI28_RS01345 PF13614 AAA domain DYI28_RS01350 PF08011 PD-(D/E)XK nuclease superfamily DYI28_RS01350 PF09820 Predicted AAA-ATPase DYI28_RS01355 PF08011 PD-(D/E)XK nuclease superfamily DYI28_RS01355 PF09820 Predicted AAA-ATPase DYI28_RS01365 PF17092 Penicillin-binding protein OB-like domain DYI28_RS01365 PF00905 Penicillin binding protein transpeptidase domain DYI28_RS01365 PF00912 Transglycosylase DYI28_RS01375 PF02348 Cytidylyltransferase DYI28_RS01390 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DYI28_RS01390 PF14572 Phosphoribosyl synthetase-associated domain DYI28_RS01395 PF07689 KaiB domain DYI28_RS01395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS01395 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS01420 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS01420 PF00593 TonB dependent receptor DYI28_RS01425 PF07980 SusD family DYI28_RS01425 PF14322 Starch-binding associating with outer membrane DYI28_RS01430 PF00884 Sulfatase DYI28_RS01435 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS01435 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYI28_RS01435 PF00703 Glycosyl hydrolases family 2 DYI28_RS01435 PF16355 Domain of unknown function (DUF4982) DYI28_RS01440 PF10990 Protein of unknown function (DUF2809) DYI28_RS01445 PF00691 OmpA family DYI28_RS01445 PF13677 Membrane MotB of proton-channel complex MotA/MotB DYI28_RS01530 PF18755 Restriction Enzyme Adenine Methylase Associated DYI28_RS01530 PF01555 DNA methylase DYI28_RS01690 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS01690 PF00589 Phage integrase family DYI28_RS01705 PF00425 chorismate binding enzyme DYI28_RS01710 PF01063 Amino-transferase class IV DYI28_RS01725 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYI28_RS01725 PF02806 Alpha amylase, C-terminal all-beta domain DYI28_RS01725 PF00128 Alpha amylase, catalytic domain DYI28_RS01735 PF00128 Alpha amylase, catalytic domain DYI28_RS01740 PF01734 Patatin-like phospholipase DYI28_RS01745 PF12801 4Fe-4S binding domain DYI28_RS01750 PF04015 Domain of unknown function (DUF362) DYI28_RS01765 PF03976 Polyphosphate kinase 2 (PPK2) DYI28_RS01775 PF00248 Aldo/keto reductase family DYI28_RS01790 PF03951 Glutamine synthetase, beta-Grasp domain DYI28_RS01790 PF00120 Glutamine synthetase, catalytic domain DYI28_RS01810 PF04397 LytTr DNA-binding domain DYI28_RS01810 PF00072 Response regulator receiver domain DYI28_RS01815 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DYI28_RS01825 PF02629 CoA binding domain DYI28_RS01825 PF00549 CoA-ligase DYI28_RS01830 PF00549 CoA-ligase DYI28_RS01830 PF08442 ATP-grasp domain DYI28_RS01840 PF00698 Acyl transferase domain DYI28_RS01845 PF08543 Phosphomethylpyrimidine kinase DYI28_RS01855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DYI28_RS01855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DYI28_RS01860 PF01261 Xylose isomerase-like TIM barrel DYI28_RS01865 PF00083 Sugar (and other) transporter DYI28_RS01875 PF00583 Acetyltransferase (GNAT) family DYI28_RS01875 PF00795 Carbon-nitrogen hydrolase DYI28_RS01880 PF10951 Protein of unknown function (DUF2776) DYI28_RS01885 PF00133 tRNA synthetases class I (I, L, M and V) DYI28_RS01885 PF08264 Anticodon-binding domain of tRNA DYI28_RS01895 PF01252 Signal peptidase (SPase) II DYI28_RS01910 PF08032 RNA 2'-O ribose methyltransferase substrate binding DYI28_RS01910 PF00588 SpoU rRNA Methylase family DYI28_RS01935 PF04170 NlpE N-terminal domain DYI28_RS01955 PF00753 Metallo-beta-lactamase superfamily DYI28_RS01970 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS01970 PF00589 Phage integrase family DYI28_RS02045 PF00625 Guanylate kinase DYI28_RS02050 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DYI28_RS02050 PF14579 Helix-hairpin-helix motif DYI28_RS02050 PF02811 PHP domain DYI28_RS02050 PF07733 Bacterial DNA polymerase III alpha NTPase domain DYI28_RS02055 PF02689 Helicase DYI28_RS02055 PF05970 PIF1-like helicase DYI28_RS02065 PF02811 PHP domain DYI28_RS02065 PF14579 Helix-hairpin-helix motif DYI28_RS02065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DYI28_RS02065 PF07733 Bacterial DNA polymerase III alpha NTPase domain DYI28_RS02070 PF08275 DNA primase catalytic core, N-terminal domain DYI28_RS02070 PF01807 CHC2 zinc finger DYI28_RS02120 PF03477 ATP cone domain DYI28_RS02120 PF02867 Ribonucleotide reductase, barrel domain DYI28_RS02120 PF00317 Ribonucleotide reductase, all-alpha domain DYI28_RS02125 PF02511 Thymidylate synthase complementing protein DYI28_RS02265 PF00574 Clp protease DYI28_RS02305 PF00692 dUTPase DYI28_RS02310 PF12826 Helix-hairpin-helix motif DYI28_RS02310 PF03120 NAD-dependent DNA ligase OB-fold domain DYI28_RS02310 PF01653 NAD-dependent DNA ligase adenylation domain DYI28_RS02310 PF00533 BRCA1 C Terminus (BRCT) domain DYI28_RS02685 PF02614 Glucuronate isomerase DYI28_RS02690 PF00356 Bacterial regulatory proteins, lacI family DYI28_RS02695 PF08125 Mannitol dehydrogenase C-terminal domain DYI28_RS02695 PF01232 Mannitol dehydrogenase Rossmann domain DYI28_RS02710 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DYI28_RS02715 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DYI28_RS02715 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DYI28_RS02715 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DYI28_RS02725 PF00271 Helicase conserved C-terminal domain DYI28_RS02725 PF00270 DEAD/DEAH box helicase DYI28_RS02750 PF01702 Queuine tRNA-ribosyltransferase DYI28_RS02755 PF00004 ATPase family associated with various cellular activities (AAA) DYI28_RS02755 PF02190 ATP-dependent protease La (LON) substrate-binding domain DYI28_RS02755 PF05362 Lon protease (S16) C-terminal proteolytic domain DYI28_RS02760 PF05175 Methyltransferase small domain DYI28_RS02860 PF01343 Peptidase family S49 DYI28_RS03040 PF07689 KaiB domain DYI28_RS03040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS03040 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS03045 PF02954 Bacterial regulatory protein, Fis family DYI28_RS03045 PF00072 Response regulator receiver domain DYI28_RS03045 PF00158 Sigma-54 interaction domain DYI28_RS03070 PF12704 MacB-like periplasmic core domain DYI28_RS03070 PF02687 FtsX-like permease family DYI28_RS03070 PF00005 ABC transporter DYI28_RS03085 PF00155 Aminotransferase class I and II DYI28_RS03090 PF00781 Diacylglycerol kinase catalytic domain DYI28_RS03095 PF02938 GAD domain DYI28_RS03095 PF00152 tRNA synthetases class II (D, K and N) DYI28_RS03095 PF01336 OB-fold nucleic acid binding domain DYI28_RS03110 PF00795 Carbon-nitrogen hydrolase DYI28_RS03115 PF04371 Porphyromonas-type peptidyl-arginine deiminase DYI28_RS03125 PF09820 Predicted AAA-ATPase DYI28_RS03125 PF08011 PD-(D/E)XK nuclease superfamily DYI28_RS03130 PF00005 ABC transporter DYI28_RS03130 PF00664 ABC transporter transmembrane region DYI28_RS03150 PF04542 Sigma-70 region 2 DYI28_RS03150 PF08281 Sigma-70, region 4 DYI28_RS03155 PF01784 NIF3 (NGG1p interacting factor 3) DYI28_RS03165 PF02321 Outer membrane efflux protein DYI28_RS03170 PF13533 Biotin-lipoyl like DYI28_RS03175 PF00873 AcrB/AcrD/AcrF family DYI28_RS03185 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus DYI28_RS03185 PF01048 Phosphorylase superfamily DYI28_RS03200 PF00175 Oxidoreductase NAD-binding domain DYI28_RS03200 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DYI28_RS03205 PF01180 Dihydroorotate dehydrogenase DYI28_RS03210 PF01746 tRNA (Guanine-1)-methyltransferase DYI28_RS03215 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DYI28_RS03215 PF12826 Helix-hairpin-helix motif DYI28_RS03215 PF03120 NAD-dependent DNA ligase OB-fold domain DYI28_RS03215 PF01653 NAD-dependent DNA ligase adenylation domain DYI28_RS03215 PF00533 BRCA1 C Terminus (BRCT) domain DYI28_RS03220 PF00701 Dihydrodipicolinate synthetase family DYI28_RS03260 PF01734 Patatin-like phospholipase DYI28_RS03265 PF00183 Hsp90 protein DYI28_RS03270 PF02861 Clp amino terminal domain, pathogenicity island component DYI28_RS03270 PF00004 ATPase family associated with various cellular activities (AAA) DYI28_RS03270 PF10431 C-terminal, D2-small domain, of ClpB protein DYI28_RS03270 PF17871 AAA lid domain DYI28_RS03270 PF07724 AAA domain (Cdc48 subfamily) DYI28_RS03275 PF00521 DNA gyrase/topoisomerase IV, subunit A DYI28_RS03275 PF03989 DNA gyrase C-terminal domain, beta-propeller DYI28_RS03310 PF13519 von Willebrand factor type A domain DYI28_RS03315 PF13519 von Willebrand factor type A domain DYI28_RS03325 PF01882 Protein of unknown function DUF58 DYI28_RS03330 PF17863 AAA lid domain DYI28_RS03330 PF07726 ATPase family associated with various cellular activities (AAA) DYI28_RS03340 PF00216 Bacterial DNA-binding protein DYI28_RS03345 PF04055 Radical SAM superfamily DYI28_RS03345 PF00919 Uncharacterized protein family UPF0004 DYI28_RS03345 PF18693 TRAM domain DYI28_RS03350 PF02881 SRP54-type protein, helical bundle domain DYI28_RS03350 PF00448 SRP54-type protein, GTPase domain DYI28_RS03360 PF00471 Ribosomal protein L33 DYI28_RS03365 PF00830 Ribosomal L28 family DYI28_RS03370 PF02464 Competence-damaged protein DYI28_RS03370 PF00994 Probable molybdopterin binding domain DYI28_RS03370 PF18146 Damage-inducible protein CinA KH domain DYI28_RS03375 PF00814 Glycoprotease family DYI28_RS03400 PF00005 ABC transporter DYI28_RS03410 PF00672 HAMP domain DYI28_RS03410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS03410 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS03415 PF00486 Transcriptional regulatory protein, C terminal DYI28_RS03415 PF00072 Response regulator receiver domain DYI28_RS03420 PF09180 Prolyl-tRNA synthetase, C-terminal DYI28_RS03420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYI28_RS03420 PF03129 Anticodon binding domain DYI28_RS03455 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS03455 PF00072 Response regulator receiver domain DYI28_RS03455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS03455 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS03455 PF12833 Helix-turn-helix domain DYI28_RS03455 PF07494 Two component regulator propeller DYI28_RS03455 PF00072 Response regulator receiver domain DYI28_RS03455 PF07494 Two component regulator propeller DYI28_RS03455 PF07495 Y_Y_Y domain DYI28_RS03455 PF07495 Y_Y_Y domain DYI28_RS03455 PF12833 Helix-turn-helix domain DYI28_RS03455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS03470 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS03470 PF00593 TonB dependent receptor DYI28_RS03490 PF12706 Beta-lactamase superfamily domain DYI28_RS03510 PF01638 HxlR-like helix-turn-helix DYI28_RS03535 PF13419 Haloacid dehalogenase-like hydrolase DYI28_RS03540 PF00106 short chain dehydrogenase DYI28_RS03555 PF06738 Putative threonine/serine exporter DYI28_RS03570 PF00593 TonB dependent receptor DYI28_RS03570 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS03585 PF17678 Glycosyl hydrolase family 92 N-terminal domain DYI28_RS03585 PF07971 Glycosyl hydrolase family 92 DYI28_RS03590 PF04041 beta-1,4-mannooligosaccharide phosphorylase DYI28_RS03625 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS03625 PF00593 TonB dependent receptor DYI28_RS03640 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS03640 PF00593 TonB dependent receptor DYI28_RS03680 PF00580 UvrD/REP helicase N-terminal domain DYI28_RS03680 PF12705 PD-(D/E)XK nuclease superfamily DYI28_RS03680 PF13361 UvrD-like helicase C-terminal domain DYI28_RS03685 PF04055 Radical SAM superfamily DYI28_RS03700 PF00072 Response regulator receiver domain DYI28_RS03700 PF00486 Transcriptional regulatory protein, C terminal DYI28_RS03705 PF16363 GDP-mannose 4,6 dehydratase DYI28_RS03770 PF02195 ParB-like nuclease domain DYI28_RS03775 PF11922 Domain of unknown function (DUF3440) DYI28_RS03775 PF01507 Phosphoadenosine phosphosulfate reductase family DYI28_RS03795 PF03796 DnaB-like helicase C terminal domain DYI28_RS03795 PF00772 DnaB-like helicase N terminal domain DYI28_RS03800 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DYI28_RS03800 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DYI28_RS03815 PF02622 Uncharacterized ACR, COG1678 DYI28_RS03830 PF13662 Toprim domain DYI28_RS03830 PF02132 RecR protein DYI28_RS03840 PF01926 50S ribosome-binding GTPase DYI28_RS03860 PF13472 GDSL-like Lipase/Acylhydrolase family DYI28_RS03860 PF07859 alpha/beta hydrolase fold DYI28_RS03870 PF03099 Biotin/lipoate A/B protein ligase family DYI28_RS03880 PF00403 Heavy-metal-associated domain DYI28_RS03900 PF00149 Calcineurin-like phosphoesterase DYI28_RS03915 PF02527 rRNA small subunit methyltransferase G DYI28_RS03920 PF00753 Metallo-beta-lactamase superfamily DYI28_RS03925 PF02347 Glycine cleavage system P-protein DYI28_RS03930 PF00881 Nitroreductase family DYI28_RS03945 PF01205 Uncharacterized protein family UPF0029 DYI28_RS03945 PF09186 Domain of unknown function (DUF1949) DYI28_RS03955 PF01842 ACT domain DYI28_RS03955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYI28_RS03955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYI28_RS03960 PF00266 Aminotransferase class-V DYI28_RS03965 PF03880 DbpA RNA binding domain DYI28_RS03965 PF00270 DEAD/DEAH box helicase DYI28_RS03965 PF00271 Helicase conserved C-terminal domain DYI28_RS03980 PF00175 Oxidoreductase NAD-binding domain DYI28_RS03980 PF00111 2Fe-2S iron-sulfur cluster binding domain DYI28_RS03980 PF00970 Oxidoreductase FAD-binding domain DYI28_RS03985 PF02508 Rnf-Nqr subunit, membrane protein DYI28_RS03990 PF02508 Rnf-Nqr subunit, membrane protein DYI28_RS03995 PF04205 FMN-binding domain DYI28_RS04000 PF03116 NQR2, RnfD, RnfE family DYI28_RS04005 PF11973 NQRA C-terminal domain DYI28_RS04005 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) DYI28_RS04010 PF03051 Peptidase C1-like family DYI28_RS04050 PF13439 Glycosyltransferase Family 4 DYI28_RS04050 PF00534 Glycosyl transferases group 1 DYI28_RS04055 PF01510 N-acetylmuramoyl-L-alanine amidase DYI28_RS04070 PF09820 Predicted AAA-ATPase DYI28_RS04070 PF08011 PD-(D/E)XK nuclease superfamily DYI28_RS04095 PF00378 Enoyl-CoA hydratase/isomerase DYI28_RS04095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DYI28_RS04095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DYI28_RS04100 PF01943 Polysaccharide biosynthesis protein DYI28_RS04105 PF08759 Glycosyltransferase GT-D fold DYI28_RS04105 PF01501 Glycosyl transferase family 8 DYI28_RS04115 PF00534 Glycosyl transferases group 1 DYI28_RS04115 PF13439 Glycosyltransferase Family 4 DYI28_RS04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS04135 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS04135 PF09308 LuxQ, periplasmic DYI28_RS04135 PF00072 Response regulator receiver domain DYI28_RS04150 PF00593 TonB dependent receptor DYI28_RS04155 PF00005 ABC transporter DYI28_RS04155 PF12848 ABC transporter DYI28_RS04170 PF00589 Phage integrase family DYI28_RS04170 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS04180 PF04002 RadC-like JAB domain DYI28_RS04190 PF14659 Phage integrase, N-terminal SAM-like domain DYI28_RS04190 PF00589 Phage integrase family DYI28_RS04205 PF01076 Plasmid recombination enzyme DYI28_RS04330 PF13614 AAA domain DYI28_RS04360 PF00069 Protein kinase domain DYI28_RS04360 PF03793 PASTA domain DYI28_RS04375 PF01131 DNA topoisomerase DYI28_RS04375 PF01751 Toprim domain DYI28_RS04425 PF04542 Sigma-70 region 2 DYI28_RS04425 PF08281 Sigma-70, region 4 DYI28_RS04430 PF02661 Fic/DOC family DYI28_RS04430 PF12728 Helix-turn-helix domain DYI28_RS04440 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS04440 PF00589 Phage integrase family DYI28_RS04545 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DYI28_RS04615 PF02195 ParB-like nuclease domain DYI28_RS04620 PF11922 Domain of unknown function (DUF3440) DYI28_RS04620 PF01507 Phosphoadenosine phosphosulfate reductase family DYI28_RS04685 PF01131 DNA topoisomerase DYI28_RS04685 PF01751 Toprim domain DYI28_RS04765 PF13166 AAA domain DYI28_RS04800 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS04800 PF09308 LuxQ, periplasmic DYI28_RS04800 PF00072 Response regulator receiver domain DYI28_RS04800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS04805 PF07859 alpha/beta hydrolase fold DYI28_RS04805 PF13472 GDSL-like Lipase/Acylhydrolase family DYI28_RS04810 PF01554 MatE DYI28_RS04815 PF00691 OmpA family DYI28_RS04815 PF13488 Glycine zipper DYI28_RS04820 PF00912 Transglycosylase DYI28_RS04825 PF04542 Sigma-70 region 2 DYI28_RS04825 PF08281 Sigma-70, region 4 DYI28_RS04830 PF04011 LemA family DYI28_RS04835 PF01435 Peptidase family M48 DYI28_RS04845 PF03458 UPF0126 domain DYI28_RS04850 PF02350 UDP-N-acetylglucosamine 2-epimerase DYI28_RS04865 PF16193 AAA C-terminal domain DYI28_RS04865 PF12002 MgsA AAA+ ATPase C terminal DYI28_RS04865 PF00004 ATPase family associated with various cellular activities (AAA) DYI28_RS04870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYI28_RS04870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYI28_RS04880 PF01654 Cytochrome bd terminal oxidase subunit I DYI28_RS04895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYI28_RS04900 PF00005 ABC transporter DYI28_RS04905 PF12704 MacB-like periplasmic core domain DYI28_RS04905 PF02687 FtsX-like permease family DYI28_RS04905 PF00005 ABC transporter DYI28_RS04915 PF04397 LytTr DNA-binding domain DYI28_RS04915 PF00072 Response regulator receiver domain DYI28_RS04925 PF04261 Dyp-type peroxidase family DYI28_RS04930 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DYI28_RS04935 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DYI28_RS04935 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DYI28_RS04940 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DYI28_RS04940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DYI28_RS04945 PF00375 Sodium:dicarboxylate symporter family DYI28_RS04950 PF16363 GDP-mannose 4,6 dehydratase DYI28_RS04955 PF01370 NAD dependent epimerase/dehydratase family DYI28_RS04960 PF00501 AMP-binding enzyme DYI28_RS04970 PF06874 Firmicute fructose-1,6-bisphosphatase DYI28_RS04975 PF02080 TrkA-C domain DYI28_RS04975 PF06826 Predicted Permease Membrane Region DYI28_RS04985 PF12592 Protein of unknown function (DUF3763) DYI28_RS04985 PF17868 AAA lid domain DYI28_RS04985 PF07728 AAA domain (dynein-related subfamily) DYI28_RS04990 PF05762 VWA domain containing CoxE-like protein DYI28_RS05135 PF01555 DNA methylase DYI28_RS05260 PF12833 Helix-turn-helix domain DYI28_RS05265 PF00149 Calcineurin-like phosphoesterase DYI28_RS05265 PF02872 5'-nucleotidase, C-terminal domain DYI28_RS05270 PF00989 PAS fold DYI28_RS05270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS05270 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS05275 PF09371 Tex-like protein N-terminal domain DYI28_RS05275 PF16921 Tex protein YqgF-like domain DYI28_RS05275 PF17674 HHH domain DYI28_RS05275 PF00575 S1 RNA binding domain DYI28_RS05310 PF00005 ABC transporter DYI28_RS05310 PF12848 ABC transporter DYI28_RS05315 PF01025 GrpE DYI28_RS05320 PF00226 DnaJ domain DYI28_RS05320 PF01556 DnaJ C terminal domain DYI28_RS05320 PF00684 DnaJ central domain DYI28_RS05325 PF01906 Putative heavy-metal-binding DYI28_RS05330 PF08713 DNA alkylation repair enzyme DYI28_RS05335 PF07980 SusD family DYI28_RS05340 PF00593 TonB dependent receptor DYI28_RS05340 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS05345 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS05345 PF00589 Phage integrase family DYI28_RS05375 PF00158 Sigma-54 interaction domain DYI28_RS05375 PF00072 Response regulator receiver domain DYI28_RS05375 PF02954 Bacterial regulatory protein, Fis family DYI28_RS05380 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS05380 PF00672 HAMP domain DYI28_RS05380 PF01627 Hpt domain DYI28_RS05380 PF00072 Response regulator receiver domain DYI28_RS05380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS05380 PF17149 Periplasmic sensor domain found in signal transduction proteins DYI28_RS05475 PF01131 DNA topoisomerase DYI28_RS05475 PF01751 Toprim domain DYI28_RS05545 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS05545 PF00589 Phage integrase family DYI28_RS05550 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS05550 PF00589 Phage integrase family DYI28_RS05610 PF13614 AAA domain DYI28_RS05650 PF01348 Type II intron maturase DYI28_RS05650 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DYI28_RS05705 PF10410 DnaB-helicase binding domain of primase DYI28_RS05705 PF01807 CHC2 zinc finger DYI28_RS05705 PF08275 DNA primase catalytic core, N-terminal domain DYI28_RS05750 PF00226 DnaJ domain DYI28_RS05750 PF01556 DnaJ C terminal domain DYI28_RS05750 PF00684 DnaJ central domain DYI28_RS05820 PF00728 Glycosyl hydrolase family 20, catalytic domain DYI28_RS05820 PF02838 Glycosyl hydrolase family 20, domain 2 DYI28_RS05820 PF07691 PA14 domain DYI28_RS05825 PF00728 Glycosyl hydrolase family 20, catalytic domain DYI28_RS05825 PF02838 Glycosyl hydrolase family 20, domain 2 DYI28_RS05825 PF07691 PA14 domain DYI28_RS05835 PF13859 BNR repeat-like domain DYI28_RS05835 PF14873 N-terminal domain of BNR-repeat neuraminidase DYI28_RS05850 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS05850 PF00593 TonB dependent receptor DYI28_RS05880 PF02638 Glycosyl hydrolase-like 10 DYI28_RS05885 PF10566 Glycoside hydrolase 97 DYI28_RS05885 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation DYI28_RS05885 PF14508 Glycosyl-hydrolase 97 N-terminal DYI28_RS05900 PF10566 Glycoside hydrolase 97 DYI28_RS05900 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation DYI28_RS05900 PF14508 Glycosyl-hydrolase 97 N-terminal DYI28_RS05930 PF02368 Bacterial Ig-like domain (group 2) DYI28_RS05930 PF02638 Glycosyl hydrolase-like 10 DYI28_RS05930 PF00395 S-layer homology domain DYI28_RS05940 PF02368 Bacterial Ig-like domain (group 2) DYI28_RS05940 PF00395 S-layer homology domain DYI28_RS05940 PF02638 Glycosyl hydrolase-like 10 DYI28_RS05960 PF00593 TonB dependent receptor DYI28_RS05960 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS05970 PF00083 Sugar (and other) transporter DYI28_RS05985 PF01325 Iron dependent repressor, N-terminal DNA binding domain DYI28_RS05985 PF00480 ROK family DYI28_RS06000 PF02677 Epoxyqueuosine reductase QueH DYI28_RS06010 PF02618 YceG-like family DYI28_RS06020 PF10371 Domain of unknown function DYI28_RS06020 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DYI28_RS06020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYI28_RS06020 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DYI28_RS06020 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DYI28_RS06025 PF00501 AMP-binding enzyme DYI28_RS06025 PF14535 AMP-binding enzyme C-terminal domain DYI28_RS06040 PF00453 Ribosomal protein L20 DYI28_RS06045 PF01632 Ribosomal protein L35 DYI28_RS06050 PF05198 Translation initiation factor IF-3, N-terminal domain DYI28_RS06050 PF00707 Translation initiation factor IF-3, C-terminal domain DYI28_RS06055 PF02824 TGS domain DYI28_RS06055 PF03129 Anticodon binding domain DYI28_RS06055 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DYI28_RS06055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYI28_RS06065 PF01327 Polypeptide deformylase DYI28_RS06070 PF03652 Holliday junction resolvase DYI28_RS06075 PF05736 OprF membrane domain DYI28_RS06075 PF00691 OmpA family DYI28_RS06090 PF00009 Elongation factor Tu GTP binding domain DYI28_RS06095 PF01507 Phosphoadenosine phosphosulfate reductase family DYI28_RS06105 PF03600 Citrate transporter DYI28_RS06105 PF02080 TrkA-C domain DYI28_RS06110 PF00459 Inositol monophosphatase family DYI28_RS06120 PF00106 short chain dehydrogenase DYI28_RS06150 PF00535 Glycosyl transferase family 2 DYI28_RS06155 PF00535 Glycosyl transferase family 2 DYI28_RS06160 PF00132 Bacterial transferase hexapeptide (six repeats) DYI28_RS06165 PF00534 Glycosyl transferases group 1 DYI28_RS06165 PF13439 Glycosyltransferase Family 4 DYI28_RS06205 PF00535 Glycosyl transferase family 2 DYI28_RS06230 PF13419 Haloacid dehalogenase-like hydrolase DYI28_RS06250 PF00535 Glycosyl transferase family 2 DYI28_RS06260 PF13614 AAA domain DYI28_RS06270 PF02397 Bacterial sugar transferase DYI28_RS06315 PF00589 Phage integrase family DYI28_RS06315 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS06320 PF01238 Phosphomannose isomerase type I DYI28_RS06325 PF01263 Aldose 1-epimerase DYI28_RS06335 PF10509 Galactokinase galactose-binding signature DYI28_RS06335 PF08544 GHMP kinases C terminal DYI28_RS06335 PF00288 GHMP kinases N terminal domain DYI28_RS06355 PF06964 Alpha-L-arabinofuranosidase C-terminal domain DYI28_RS06355 PF02018 Carbohydrate binding domain DYI28_RS06360 PF01263 Aldose 1-epimerase DYI28_RS06365 PF00474 Sodium:solute symporter family DYI28_RS06370 PF00293 NUDIX domain DYI28_RS06370 PF09297 NADH pyrophosphatase zinc ribbon domain DYI28_RS06375 PF00596 Class II Aldolase and Adducin N-terminal domain DYI28_RS06380 PF02610 L-arabinose isomerase DYI28_RS06380 PF11762 L-arabinose isomerase C-terminal domain DYI28_RS06385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DYI28_RS06385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DYI28_RS06395 PF06964 Alpha-L-arabinofuranosidase C-terminal domain DYI28_RS06400 PF02779 Transketolase, pyrimidine binding domain DYI28_RS06400 PF02780 Transketolase, C-terminal domain DYI28_RS06400 PF00456 Transketolase, thiamine diphosphate binding domain DYI28_RS06405 PF02502 Ribose/Galactose Isomerase DYI28_RS06410 PF01208 Uroporphyrinogen decarboxylase (URO-D) DYI28_RS06420 PF00474 Sodium:solute symporter family DYI28_RS06425 PF02310 B12 binding domain DYI28_RS06425 PF02607 B12 binding domain DYI28_RS06430 PF17137 Domain of unknown function (DUF5110) DYI28_RS06430 PF01055 Glycosyl hydrolases family 31 DYI28_RS06430 PF16338 Domain of unknown function (DUF4968) DYI28_RS06475 PF07470 Glycosyl Hydrolase Family 88 DYI28_RS06490 PF00593 TonB dependent receptor DYI28_RS06490 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS06540 PF01464 Transglycosylase SLT domain DYI28_RS06540 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYI28_RS06550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DYI28_RS06550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYI28_RS06555 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DYI28_RS06580 PF00258 Flavodoxin DYI28_RS06585 PF02780 Transketolase, C-terminal domain DYI28_RS06585 PF02779 Transketolase, pyrimidine binding domain DYI28_RS06590 PF02817 e3 binding domain DYI28_RS06590 PF00364 Biotin-requiring enzyme DYI28_RS06590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DYI28_RS06595 PF10437 Bacterial lipoate protein ligase C-terminus DYI28_RS06595 PF03099 Biotin/lipoate A/B protein ligase family DYI28_RS06600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYI28_RS06600 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYI28_RS06605 PF01183 Glycosyl hydrolases family 25 DYI28_RS06610 PF00365 Phosphofructokinase DYI28_RS06615 PF02321 Outer membrane efflux protein DYI28_RS06620 PF00873 AcrB/AcrD/AcrF family DYI28_RS06625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYI28_RS06630 PF01734 Patatin-like phospholipase DYI28_RS06650 PF00589 Phage integrase family DYI28_RS06650 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS06670 PF00795 Carbon-nitrogen hydrolase DYI28_RS06675 PF02585 GlcNAc-PI de-N-acetylase DYI28_RS06675 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DYI28_RS06695 PF11842 Domain of unknown function (DUF3362) DYI28_RS06695 PF08497 Radical SAM N-terminal DYI28_RS06695 PF04055 Radical SAM superfamily DYI28_RS06700 PF00271 Helicase conserved C-terminal domain DYI28_RS06700 PF00270 DEAD/DEAH box helicase DYI28_RS06700 PF02559 CarD-like/TRCF domain DYI28_RS06700 PF17757 UvrB interaction domain DYI28_RS06700 PF03461 TRCF domain DYI28_RS06705 PF00535 Glycosyl transferase family 2 DYI28_RS06710 PF01979 Amidohydrolase family DYI28_RS06715 PF02310 B12 binding domain DYI28_RS06715 PF02607 B12 binding domain DYI28_RS06715 PF02965 Vitamin B12 dependent methionine synthase, activation domain DYI28_RS06715 PF00809 Pterin binding enzyme DYI28_RS06715 PF02574 Homocysteine S-methyltransferase DYI28_RS06735 PF00149 Calcineurin-like phosphoesterase DYI28_RS06735 PF12320 Type 5 capsule protein repressor C-terminal domain DYI28_RS06760 PF04055 Radical SAM superfamily DYI28_RS06760 PF13186 Iron-sulfur cluster-binding domain DYI28_RS06765 PF10459 Peptidase S46 DYI28_RS06770 PF10459 Peptidase S46 DYI28_RS06785 PF00085 Thioredoxin DYI28_RS06790 PF00085 Thioredoxin DYI28_RS06800 PF02915 Rubrerythrin DYI28_RS06805 PF01475 Ferric uptake regulator family DYI28_RS06820 PF00082 Subtilase family DYI28_RS06820 PF04151 Bacterial pre-peptidase C-terminal domain DYI28_RS06850 PF00593 TonB dependent receptor DYI28_RS06850 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS06855 PF00795 Carbon-nitrogen hydrolase DYI28_RS06855 PF02540 NAD synthase DYI28_RS06865 PF00475 Imidazoleglycerol-phosphate dehydratase DYI28_RS06870 PF00155 Aminotransferase class I and II DYI28_RS06875 PF00815 Histidinol dehydrogenase DYI28_RS06880 PF01634 ATP phosphoribosyltransferase DYI28_RS06880 PF08029 HisG, C-terminal domain DYI28_RS06905 PF07690 Major Facilitator Superfamily DYI28_RS06910 PF03009 Glycerophosphoryl diester phosphodiesterase family DYI28_RS06930 PF07980 SusD family DYI28_RS06930 PF14322 Starch-binding associating with outer membrane DYI28_RS06935 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS06935 PF00593 TonB dependent receptor DYI28_RS06950 PF17954 Quercetinase C-terminal cupin domain DYI28_RS06950 PF02678 Pirin DYI28_RS06955 PF11412 Disulphide bond corrector protein DsbC DYI28_RS06955 PF02683 Cytochrome C biogenesis protein transmembrane region DYI28_RS06965 PF00485 Phosphoribulokinase / Uridine kinase family DYI28_RS06970 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYI28_RS06970 PF01464 Transglycosylase SLT domain DYI28_RS06975 PF00474 Sodium:solute symporter family DYI28_RS06980 PF00881 Nitroreductase family DYI28_RS06985 PF02310 B12 binding domain DYI28_RS06985 PF02607 B12 binding domain DYI28_RS06985 PF02574 Homocysteine S-methyltransferase DYI28_RS06985 PF02965 Vitamin B12 dependent methionine synthase, activation domain DYI28_RS06985 PF00809 Pterin binding enzyme DYI28_RS06990 PF01668 SmpB protein DYI28_RS07045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYI28_RS07045 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DYI28_RS07050 PF07703 Alpha-2-macroglobulin bait region domain DYI28_RS07050 PF00207 Alpha-2-macroglobulin family DYI28_RS07050 PF17962 Bacterial macroglobulin domain 6 DYI28_RS07050 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DYI28_RS07050 PF01835 MG2 domain DYI28_RS07050 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain DYI28_RS07050 PF07678 A-macroglobulin TED domain DYI28_RS07050 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DYI28_RS07050 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DYI28_RS07055 PF06832 Penicillin-Binding Protein C-terminus Family DYI28_RS07055 PF00912 Transglycosylase DYI28_RS07055 PF00905 Penicillin binding protein transpeptidase domain DYI28_RS07060 PF07690 Major Facilitator Superfamily DYI28_RS07070 PF03553 Na+/H+ antiporter family DYI28_RS07080 PF00196 Bacterial regulatory proteins, luxR family DYI28_RS07080 PF00072 Response regulator receiver domain DYI28_RS07095 PF00595 PDZ domain DYI28_RS07095 PF03572 Peptidase family S41 DYI28_RS07100 PF00756 Putative esterase DYI28_RS07115 PF01435 Peptidase family M48 DYI28_RS07120 PF00571 CBS domain DYI28_RS07120 PF03471 Transporter associated domain DYI28_RS07120 PF01595 Cyclin M transmembrane N-terminal domain DYI28_RS07135 PF07470 Glycosyl Hydrolase Family 88 DYI28_RS07140 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DYI28_RS07140 PF04616 Glycosyl hydrolases family 43 DYI28_RS07155 PF14322 Starch-binding associating with outer membrane DYI28_RS07155 PF07980 SusD family DYI28_RS07160 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS07160 PF00593 TonB dependent receptor DYI28_RS07165 PF04542 Sigma-70 region 2 DYI28_RS07165 PF08281 Sigma-70, region 4 DYI28_RS07170 PF12833 Helix-turn-helix domain DYI28_RS07175 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS07175 PF00589 Phage integrase family DYI28_RS07275 PF06908 YspA SLOG family DYI28_RS07280 PF02195 ParB-like nuclease domain DYI28_RS07280 PF17762 HTH domain found in ParB protein DYI28_RS07300 PF04002 RadC-like JAB domain DYI28_RS07490 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS07490 PF00589 Phage integrase family DYI28_RS07500 PF01751 Toprim domain DYI28_RS07500 PF01131 DNA topoisomerase DYI28_RS07575 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS07575 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYI28_RS07575 PF02929 Beta galactosidase small chain DYI28_RS07575 PF16353 Domain of unknown function(DUF4981) DYI28_RS07575 PF00703 Glycosyl hydrolases family 2 DYI28_RS07595 PF00593 TonB dependent receptor DYI28_RS07595 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS07605 PF12833 Helix-turn-helix domain DYI28_RS07615 PF00561 alpha/beta hydrolase fold DYI28_RS07640 PF00248 Aldo/keto reductase family DYI28_RS07645 PF10566 Glycoside hydrolase 97 DYI28_RS07645 PF14508 Glycosyl-hydrolase 97 N-terminal DYI28_RS07645 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation DYI28_RS07650 PF07883 Cupin domain DYI28_RS07650 PF12833 Helix-turn-helix domain DYI28_RS07655 PF00106 short chain dehydrogenase DYI28_RS07660 PF03786 D-mannonate dehydratase (UxuA) DYI28_RS07690 PF07980 SusD family DYI28_RS07690 PF14322 Starch-binding associating with outer membrane DYI28_RS07695 PF00593 TonB dependent receptor DYI28_RS07695 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS07700 PF08281 Sigma-70, region 4 DYI28_RS07700 PF04542 Sigma-70 region 2 DYI28_RS07710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS07710 PF12833 Helix-turn-helix domain DYI28_RS07710 PF07494 Two component regulator propeller DYI28_RS07710 PF00072 Response regulator receiver domain DYI28_RS07710 PF07495 Y_Y_Y domain DYI28_RS07710 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS07750 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS07750 PF00589 Phage integrase family DYI28_RS07805 PF01000 RNA polymerase Rpb3/RpoA insert domain DYI28_RS07805 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DYI28_RS07805 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DYI28_RS07850 PF01555 DNA methylase DYI28_RS07945 PF02195 ParB-like nuclease domain DYI28_RS07945 PF17762 HTH domain found in ParB protein DYI28_RS07965 PF13614 AAA domain DYI28_RS07985 PF03544 Gram-negative bacterial TonB protein C-terminal DYI28_RS08000 PF00436 Single-strand binding protein family DYI28_RS08060 PF00196 Bacterial regulatory proteins, luxR family DYI28_RS08060 PF00072 Response regulator receiver domain DYI28_RS08065 PF10145 Phage-related minor tail protein DYI28_RS08065 PF01464 Transglycosylase SLT domain DYI28_RS08065 PF01551 Peptidase family M23 DYI28_RS08130 PF05190 MutS family domain IV DYI28_RS08130 PF05188 MutS domain II DYI28_RS08130 PF05192 MutS domain III DYI28_RS08130 PF00488 MutS domain V DYI28_RS08130 PF01624 MutS domain I DYI28_RS08135 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DYI28_RS08135 PF01476 LysM domain DYI28_RS08155 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DYI28_RS08155 PF01348 Type II intron maturase DYI28_RS08250 PF00728 Glycosyl hydrolase family 20, catalytic domain DYI28_RS08250 PF02838 Glycosyl hydrolase family 20, domain 2 DYI28_RS08250 PF07691 PA14 domain DYI28_RS08275 PF00239 Resolvase, N terminal domain DYI28_RS08275 PF02796 Helix-turn-helix domain of resolvase DYI28_RS08315 PF01757 Acyltransferase family DYI28_RS08365 PF00216 Bacterial DNA-binding protein DYI28_RS08460 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DYI28_RS08460 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DYI28_RS08460 PF00037 4Fe-4S binding domain DYI28_RS08465 PF02906 Iron only hydrogenase large subunit, C-terminal domain DYI28_RS08465 PF02256 Iron hydrogenase small subunit DYI28_RS08465 PF00037 4Fe-4S binding domain DYI28_RS08465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DYI28_RS08520 PF02954 Bacterial regulatory protein, Fis family DYI28_RS08520 PF00158 Sigma-54 interaction domain DYI28_RS08520 PF00072 Response regulator receiver domain DYI28_RS08525 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS08525 PF00072 Response regulator receiver domain DYI28_RS08525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS08525 PF09456 RcsC Alpha-Beta-Loop (ABL) DYI28_RS08530 PF00106 short chain dehydrogenase DYI28_RS08535 PF03786 D-mannonate dehydratase (UxuA) DYI28_RS08545 PF00703 Glycosyl hydrolases family 2 DYI28_RS08545 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DYI28_RS08545 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS08545 PF16355 Domain of unknown function (DUF4982) DYI28_RS08545 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYI28_RS08555 PF04616 Glycosyl hydrolases family 43 DYI28_RS08555 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DYI28_RS08560 PF07980 SusD family DYI28_RS08565 PF00593 TonB dependent receptor DYI28_RS08565 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS08575 PF00072 Response regulator receiver domain DYI28_RS08575 PF07494 Two component regulator propeller DYI28_RS08575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS08575 PF12833 Helix-turn-helix domain DYI28_RS08575 PF07495 Y_Y_Y domain DYI28_RS08575 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS08580 PF00872 Transposase, Mutator family DYI28_RS08590 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYI28_RS08590 PF00703 Glycosyl hydrolases family 2 DYI28_RS08590 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS08590 PF16355 Domain of unknown function (DUF4982) DYI28_RS08590 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DYI28_RS08600 PF13472 GDSL-like Lipase/Acylhydrolase family DYI28_RS08610 PF00593 TonB dependent receptor DYI28_RS08610 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS08625 PF00072 Response regulator receiver domain DYI28_RS08625 PF07495 Y_Y_Y domain DYI28_RS08625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS08625 PF12833 Helix-turn-helix domain DYI28_RS08625 PF07494 Two component regulator propeller DYI28_RS08625 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS08645 PF17762 HTH domain found in ParB protein DYI28_RS08645 PF02195 ParB-like nuclease domain DYI28_RS08660 PF01435 Peptidase family M48 DYI28_RS08725 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DYI28_RS08845 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DYI28_RS08845 PF01348 Type II intron maturase DYI28_RS08880 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS08880 PF00589 Phage integrase family DYI28_RS08895 PF00589 Phage integrase family DYI28_RS08895 PF13495 Phage integrase, N-terminal SAM-like domain DYI28_RS08980 PF01131 DNA topoisomerase DYI28_RS08980 PF01751 Toprim domain DYI28_RS09170 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS09170 PF00589 Phage integrase family DYI28_RS09180 PF01228 Glycine radical DYI28_RS09180 PF02901 Pyruvate formate lyase-like DYI28_RS09185 PF04055 Radical SAM superfamily DYI28_RS09190 PF01510 N-acetylmuramoyl-L-alanine amidase DYI28_RS09235 PF07690 Major Facilitator Superfamily DYI28_RS09240 PF03009 Glycerophosphoryl diester phosphodiesterase family DYI28_RS09245 PF01752 Collagenase DYI28_RS09245 PF18496 Collagenase G catalytic helper subdomain DYI28_RS09245 PF08453 Peptidase family M9 N-terminal DYI28_RS09250 PF03009 Glycerophosphoryl diester phosphodiesterase family DYI28_RS09260 PF00593 TonB dependent receptor DYI28_RS09260 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS09270 PF04542 Sigma-70 region 2 DYI28_RS09270 PF08281 Sigma-70, region 4 DYI28_RS09290 PF00230 Major intrinsic protein DYI28_RS09295 PF03466 LysR substrate binding domain DYI28_RS09295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYI28_RS09300 PF00210 Ferritin-like domain DYI28_RS09320 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS09320 PF00593 TonB dependent receptor DYI28_RS09335 PF04545 Sigma-70, region 4 DYI28_RS09335 PF04539 Sigma-70 region 3 DYI28_RS09335 PF04542 Sigma-70 region 2 DYI28_RS09345 PF00005 ABC transporter DYI28_RS09345 PF12704 MacB-like periplasmic core domain DYI28_RS09345 PF02687 FtsX-like permease family DYI28_RS09350 PF02687 FtsX-like permease family DYI28_RS09350 PF12704 MacB-like periplasmic core domain DYI28_RS09350 PF00005 ABC transporter DYI28_RS09365 PF02954 Bacterial regulatory protein, Fis family DYI28_RS09365 PF00072 Response regulator receiver domain DYI28_RS09365 PF00158 Sigma-54 interaction domain DYI28_RS09370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS09370 PF00989 PAS fold DYI28_RS09370 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS09375 PF01594 AI-2E family transporter DYI28_RS09380 PF00535 Glycosyl transferase family 2 DYI28_RS09385 PF00583 Acetyltransferase (GNAT) family DYI28_RS09390 PF02080 TrkA-C domain DYI28_RS09390 PF18030 RimK PreATP-grasp domain DYI28_RS09390 PF08443 RimK-like ATP-grasp domain DYI28_RS09395 PF12704 MacB-like periplasmic core domain DYI28_RS09395 PF02687 FtsX-like permease family DYI28_RS09395 PF00005 ABC transporter DYI28_RS09400 PF00155 Aminotransferase class I and II DYI28_RS09420 PF12848 ABC transporter DYI28_RS09420 PF00005 ABC transporter DYI28_RS09420 PF16326 ABC transporter C-terminal domain DYI28_RS09435 PF00486 Transcriptional regulatory protein, C terminal DYI28_RS09435 PF00072 Response regulator receiver domain DYI28_RS09440 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS09440 PF13426 PAS domain DYI28_RS09440 PF00672 HAMP domain DYI28_RS09440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS09455 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS09455 PF00593 TonB dependent receptor DYI28_RS09475 PF01212 Beta-eliminating lyase DYI28_RS09495 PF00571 CBS domain DYI28_RS09495 PF03471 Transporter associated domain DYI28_RS09500 PF00436 Single-strand binding protein family DYI28_RS09505 PF14815 NUDIX domain DYI28_RS09505 PF00730 HhH-GPD superfamily base excision DNA repair protein DYI28_RS09510 PF00216 Bacterial DNA-binding protein DYI28_RS09515 PF00575 S1 RNA binding domain DYI28_RS09515 PF10150 Ribonuclease E/G family DYI28_RS09520 PF08011 PD-(D/E)XK nuclease superfamily DYI28_RS09520 PF09820 Predicted AAA-ATPase DYI28_RS09525 PF08011 PD-(D/E)XK nuclease superfamily DYI28_RS09525 PF09820 Predicted AAA-ATPase DYI28_RS09570 PF03796 DnaB-like helicase C terminal domain DYI28_RS09570 PF14528 LAGLIDADG-like domain DYI28_RS09570 PF00772 DnaB-like helicase N terminal domain DYI28_RS09585 PF01510 N-acetylmuramoyl-L-alanine amidase DYI28_RS09620 PF00593 TonB dependent receptor DYI28_RS09620 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS09625 PF00465 Iron-containing alcohol dehydrogenase DYI28_RS09640 PF01066 CDP-alcohol phosphatidyltransferase DYI28_RS09650 PF04608 Phosphatidylglycerophosphatase A DYI28_RS09665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS09665 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS09670 PF02954 Bacterial regulatory protein, Fis family DYI28_RS09670 PF00158 Sigma-54 interaction domain DYI28_RS09670 PF00072 Response regulator receiver domain DYI28_RS09680 PF00072 Response regulator receiver domain DYI28_RS09680 PF01627 Hpt domain DYI28_RS09680 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYI28_RS09680 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS09680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS09680 PF00672 HAMP domain DYI28_RS09690 PF02687 FtsX-like permease family DYI28_RS09690 PF12704 MacB-like periplasmic core domain DYI28_RS09700 PF00005 ABC transporter DYI28_RS09700 PF12704 MacB-like periplasmic core domain DYI28_RS09700 PF02687 FtsX-like permease family DYI28_RS09710 PF00005 ABC transporter DYI28_RS09720 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYI28_RS09725 PF13457 GW (Gly-Tryp) dipeptide domain DYI28_RS09725 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DYI28_RS09730 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DYI28_RS09740 PF04224 Protein of unknown function, DUF417 DYI28_RS09745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYI28_RS09745 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYI28_RS09750 PF12848 ABC transporter DYI28_RS09750 PF16326 ABC transporter C-terminal domain DYI28_RS09750 PF00005 ABC transporter DYI28_RS09760 PF09297 NADH pyrophosphatase zinc ribbon domain DYI28_RS09760 PF00293 NUDIX domain DYI28_RS09760 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DYI28_RS09770 PF01757 Acyltransferase family DYI28_RS09775 PF04235 Protein of unknown function (DUF418) DYI28_RS09775 PF07786 Protein of unknown function (DUF1624) DYI28_RS09780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DYI28_RS09780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYI28_RS09780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYI28_RS09780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYI28_RS09785 PF03577 Peptidase family C69 DYI28_RS09800 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS09800 PF00593 TonB dependent receptor DYI28_RS09815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DYI28_RS09815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DYI28_RS09820 PF03060 Nitronate monooxygenase DYI28_RS09845 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DYI28_RS09845 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DYI28_RS09855 PF02590 Predicted SPOUT methyltransferase DYI28_RS09875 PF14489 QueF-like protein DYI28_RS09880 PF06508 Queuosine biosynthesis protein QueC DYI28_RS09895 PF04542 Sigma-70 region 2 DYI28_RS09895 PF08281 Sigma-70, region 4 DYI28_RS09930 PF07980 SusD family DYI28_RS09930 PF14322 Starch-binding associating with outer membrane DYI28_RS09935 PF00593 TonB dependent receptor DYI28_RS09935 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS09955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYI28_RS09955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYI28_RS09960 PF17954 Quercetinase C-terminal cupin domain DYI28_RS09960 PF02678 Pirin DYI28_RS09965 PF01243 Pyridoxamine 5'-phosphate oxidase DYI28_RS09965 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DYI28_RS09980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DYI28_RS10010 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS10010 PF00072 Response regulator receiver domain DYI28_RS10010 PF09308 LuxQ, periplasmic DYI28_RS10010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS10030 PF17910 FeoB cytosolic helical domain DYI28_RS10030 PF02421 Ferrous iron transport protein B DYI28_RS10030 PF07670 Nucleoside recognition DYI28_RS10030 PF07664 Ferrous iron transport protein B C terminus DYI28_RS10030 PF04023 FeoA domain DYI28_RS10035 PF01171 PP-loop family DYI28_RS10045 PF07497 Rho termination factor, RNA-binding domain DYI28_RS10045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYI28_RS10050 PF16347 Domain of unknown function (DUF4976) DYI28_RS10050 PF00884 Sulfatase DYI28_RS10055 PF00989 PAS fold DYI28_RS10055 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS10055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS10060 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS10060 PF00989 PAS fold DYI28_RS10060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS10065 PF01554 MatE DYI28_RS10070 PF02978 Signal peptide binding domain DYI28_RS10070 PF02881 SRP54-type protein, helical bundle domain DYI28_RS10070 PF00448 SRP54-type protein, GTPase domain DYI28_RS10075 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DYI28_RS10075 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DYI28_RS10120 PF04002 RadC-like JAB domain DYI28_RS10160 PF13276 HTH-like domain DYI28_RS10160 PF00665 Integrase core domain DYI28_RS10160 PF13333 Integrase core domain DYI28_RS10185 PF13651 Adenine-specific methyltransferase EcoRI DYI28_RS10200 PF14659 Phage integrase, N-terminal SAM-like domain DYI28_RS10200 PF00589 Phage integrase family DYI28_RS10205 PF01076 Plasmid recombination enzyme DYI28_RS10220 PF00589 Phage integrase family DYI28_RS10220 PF14659 Phage integrase, N-terminal SAM-like domain DYI28_RS10245 PF04024 PspC domain DYI28_RS10250 PF12169 DNA polymerase III subunits gamma and tau domain III DYI28_RS10275 PF01546 Peptidase family M20/M25/M40 DYI28_RS10275 PF07687 Peptidase dimerisation domain DYI28_RS10285 PF13180 PDZ domain DYI28_RS10325 PF00924 Mechanosensitive ion channel DYI28_RS10335 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYI28_RS10335 PF02929 Beta galactosidase small chain DYI28_RS10335 PF16353 Domain of unknown function(DUF4981) DYI28_RS10335 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS10335 PF00703 Glycosyl hydrolases family 2 DYI28_RS10340 PF02838 Glycosyl hydrolase family 20, domain 2 DYI28_RS10340 PF07691 PA14 domain DYI28_RS10340 PF00728 Glycosyl hydrolase family 20, catalytic domain DYI28_RS10345 PF16347 Domain of unknown function (DUF4976) DYI28_RS10345 PF00884 Sulfatase DYI28_RS10360 PF00593 TonB dependent receptor DYI28_RS10360 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS10385 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS10385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS10385 PF09308 LuxQ, periplasmic DYI28_RS10385 PF00072 Response regulator receiver domain DYI28_RS10390 PF12804 MobA-like NTP transferase domain DYI28_RS10395 PF03668 P-loop ATPase protein family DYI28_RS10400 PF07495 Y_Y_Y domain DYI28_RS10400 PF00072 Response regulator receiver domain DYI28_RS10400 PF07494 Two component regulator propeller DYI28_RS10400 PF12833 Helix-turn-helix domain DYI28_RS10400 PF07494 Two component regulator propeller DYI28_RS10400 PF00072 Response regulator receiver domain DYI28_RS10400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS10400 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS10400 PF07495 Y_Y_Y domain DYI28_RS10400 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS10400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS10400 PF12833 Helix-turn-helix domain DYI28_RS10405 PF00923 Transaldolase/Fructose-6-phosphate aldolase DYI28_RS10410 PF01791 DeoC/LacD family aldolase DYI28_RS10415 PF00300 Histidine phosphatase superfamily (branch 1) DYI28_RS10430 PF00593 TonB dependent receptor DYI28_RS10430 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS10445 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYI28_RS10445 PF00072 Response regulator receiver domain DYI28_RS10445 PF01627 Hpt domain DYI28_RS10445 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS10445 PF00672 HAMP domain DYI28_RS10445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS10450 PF00005 ABC transporter DYI28_RS10455 PF03648 Glycosyl hydrolase family 67 N-terminus DYI28_RS10455 PF07488 Glycosyl hydrolase family 67 middle domain DYI28_RS10455 PF07477 Glycosyl hydrolase family 67 C-terminus DYI28_RS10460 PF04616 Glycosyl hydrolases family 43 DYI28_RS10465 PF00331 Glycosyl hydrolase family 10 DYI28_RS10490 PF14322 Starch-binding associating with outer membrane DYI28_RS10490 PF07980 SusD family DYI28_RS10495 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS10495 PF00593 TonB dependent receptor DYI28_RS10500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS10500 PF08448 PAS fold DYI28_RS10500 PF00072 Response regulator receiver domain DYI28_RS10500 PF13426 PAS domain DYI28_RS10500 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS10505 PF00128 Alpha amylase, catalytic domain DYI28_RS10505 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYI28_RS10505 PF03714 Bacterial pullanase-associated domain DYI28_RS10510 PF02075 Crossover junction endodeoxyribonuclease RuvC DYI28_RS10555 PF10459 Peptidase S46 DYI28_RS10585 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS10585 PF00589 Phage integrase family DYI28_RS10625 PF01751 Toprim domain DYI28_RS10625 PF01131 DNA topoisomerase DYI28_RS10645 PF01348 Type II intron maturase DYI28_RS10645 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DYI28_RS10655 PF03764 Elongation factor G, domain IV DYI28_RS10655 PF00679 Elongation factor G C-terminus DYI28_RS10655 PF14492 Elongation Factor G, domain II DYI28_RS10655 PF00009 Elongation factor Tu GTP binding domain DYI28_RS10660 PF00072 Response regulator receiver domain DYI28_RS10660 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYI28_RS10660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS10660 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS10660 PF01627 Hpt domain DYI28_RS10665 PF00158 Sigma-54 interaction domain DYI28_RS10665 PF00072 Response regulator receiver domain DYI28_RS10665 PF02954 Bacterial regulatory protein, Fis family DYI28_RS10680 PF13173 AAA domain DYI28_RS10680 PF13635 Domain of unknown function (DUF4143) DYI28_RS10790 PF08275 DNA primase catalytic core, N-terminal domain DYI28_RS10790 PF01807 CHC2 zinc finger DYI28_RS10865 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DYI28_RS10865 PF01409 tRNA synthetases class II core domain (F) DYI28_RS10875 PF07690 Major Facilitator Superfamily DYI28_RS10880 PF00730 HhH-GPD superfamily base excision DNA repair protein DYI28_RS10880 PF10576 Iron-sulfur binding domain of endonuclease III DYI28_RS10880 PF00633 Helix-hairpin-helix motif DYI28_RS10885 PF00162 Phosphoglycerate kinase DYI28_RS10900 PF04235 Protein of unknown function (DUF418) DYI28_RS10910 PF02545 Maf-like protein DYI28_RS10930 PF00881 Nitroreductase family DYI28_RS10940 PF00484 Carbonic anhydrase DYI28_RS10950 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS10950 PF00593 TonB dependent receptor DYI28_RS10965 PF01039 Carboxyl transferase domain DYI28_RS10975 PF00364 Biotin-requiring enzyme DYI28_RS10980 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DYI28_RS10990 PF01116 Fructose-bisphosphate aldolase class-II DYI28_RS10995 PF01197 Ribosomal protein L31 DYI28_RS11000 PF13173 AAA domain DYI28_RS11000 PF13635 Domain of unknown function (DUF4143) DYI28_RS11020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYI28_RS11025 PF00873 AcrB/AcrD/AcrF family DYI28_RS11045 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DYI28_RS11050 PF00364 Biotin-requiring enzyme DYI28_RS11070 PF03144 Elongation factor Tu domain 2 DYI28_RS11070 PF00009 Elongation factor Tu GTP binding domain DYI28_RS11070 PF16658 Class II release factor RF3, C-terminal domain DYI28_RS11075 PF04321 RmlD substrate binding domain DYI28_RS11085 PF01810 LysE type translocator DYI28_RS11090 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DYI28_RS11090 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DYI28_RS11090 PF02769 AIR synthase related protein, C-terminal domain DYI28_RS11095 PF12833 Helix-turn-helix domain DYI28_RS11095 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS11095 PF07494 Two component regulator propeller DYI28_RS11095 PF00072 Response regulator receiver domain DYI28_RS11095 PF07495 Y_Y_Y domain DYI28_RS11095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS11095 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS11095 PF12833 Helix-turn-helix domain DYI28_RS11095 PF07494 Two component regulator propeller DYI28_RS11095 PF07495 Y_Y_Y domain DYI28_RS11095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS11095 PF00072 Response regulator receiver domain DYI28_RS11100 PF02417 Chromate transporter DYI28_RS11110 PF02638 Glycosyl hydrolase-like 10 DYI28_RS11115 PF17760 UvrA interaction domain DYI28_RS11115 PF17755 UvrA DNA-binding domain DYI28_RS11130 PF02554 Carbon starvation protein CstA DYI28_RS11135 PF02638 Glycosyl hydrolase-like 10 DYI28_RS11150 PF10371 Domain of unknown function DYI28_RS11150 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DYI28_RS11150 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DYI28_RS11150 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DYI28_RS11150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYI28_RS11150 PF12838 4Fe-4S dicluster domain DYI28_RS11155 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DYI28_RS11160 PF00528 Binding-protein-dependent transport system inner membrane component DYI28_RS11165 PF00005 ABC transporter DYI28_RS11165 PF00571 CBS domain DYI28_RS11170 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DYI28_RS11170 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DYI28_RS11180 PF07494 Two component regulator propeller DYI28_RS11180 PF00072 Response regulator receiver domain DYI28_RS11180 PF07495 Y_Y_Y domain DYI28_RS11180 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS11180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS11180 PF12833 Helix-turn-helix domain DYI28_RS11185 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS11185 PF00593 TonB dependent receptor DYI28_RS11200 PF08244 Glycosyl hydrolases family 32 C terminal DYI28_RS11200 PF00251 Glycosyl hydrolases family 32 N-terminal domain DYI28_RS11215 PF14322 Starch-binding associating with outer membrane DYI28_RS11215 PF07980 SusD family DYI28_RS11220 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS11220 PF00593 TonB dependent receptor DYI28_RS11235 PF08244 Glycosyl hydrolases family 32 C terminal DYI28_RS11235 PF00251 Glycosyl hydrolases family 32 N-terminal domain DYI28_RS11245 PF01734 Patatin-like phospholipase DYI28_RS11250 PF00999 Sodium/hydrogen exchanger family DYI28_RS11285 PF00072 Response regulator receiver domain DYI28_RS11285 PF04397 LytTr DNA-binding domain DYI28_RS11335 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS11335 PF00593 TonB dependent receptor DYI28_RS11350 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS11350 PF00593 TonB dependent receptor DYI28_RS11370 PF01012 Electron transfer flavoprotein domain DYI28_RS11375 PF00766 Electron transfer flavoprotein FAD-binding domain DYI28_RS11375 PF01012 Electron transfer flavoprotein domain DYI28_RS11380 PF02770 Acyl-CoA dehydrogenase, middle domain DYI28_RS11380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYI28_RS11380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYI28_RS11385 PF01694 Rhomboid family DYI28_RS11400 PF13185 GAF domain DYI28_RS11410 PF01556 DnaJ C terminal domain DYI28_RS11410 PF00226 DnaJ domain DYI28_RS11410 PF00684 DnaJ central domain DYI28_RS11415 PF00884 Sulfatase DYI28_RS11415 PF08019 Phosphoethanolamine transferase EptA/EptB DYI28_RS11425 PF01212 Beta-eliminating lyase DYI28_RS11435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYI28_RS11435 PF00205 Thiamine pyrophosphate enzyme, central domain DYI28_RS11435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYI28_RS11475 PF00118 TCP-1/cpn60 chaperonin family DYI28_RS11480 PF00166 Chaperonin 10 Kd subunit DYI28_RS11505 PF04055 Radical SAM superfamily DYI28_RS11505 PF06968 Biotin and Thiamin Synthesis associated domain DYI28_RS11515 PF10396 GTP-binding protein TrmE N-terminus DYI28_RS11515 PF12631 MnmE helical domain DYI28_RS11515 PF01926 50S ribosome-binding GTPase DYI28_RS11520 PF13393 Histidyl-tRNA synthetase DYI28_RS11520 PF03129 Anticodon binding domain DYI28_RS11535 PF00709 Adenylosuccinate synthetase DYI28_RS11560 PF00570 HRDC domain DYI28_RS11560 PF00270 DEAD/DEAH box helicase DYI28_RS11560 PF09382 RQC domain DYI28_RS11560 PF16124 RecQ zinc-binding DYI28_RS11560 PF00271 Helicase conserved C-terminal domain DYI28_RS11570 PF00291 Pyridoxal-phosphate dependent enzyme DYI28_RS11575 PF00884 Sulfatase DYI28_RS11580 PF01569 PAP2 superfamily DYI28_RS11585 PF00180 Isocitrate/isopropylmalate dehydrogenase DYI28_RS11590 PF00682 HMGL-like DYI28_RS11590 PF08502 LeuA allosteric (dimerisation) domain DYI28_RS11595 PF00694 Aconitase C-terminal domain DYI28_RS11600 PF00330 Aconitase family (aconitate hydratase) DYI28_RS11605 PF08502 LeuA allosteric (dimerisation) domain DYI28_RS11605 PF00682 HMGL-like DYI28_RS11650 PF02311 AraC-like ligand binding domain DYI28_RS11650 PF12833 Helix-turn-helix domain DYI28_RS11700 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DYI28_RS11700 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DYI28_RS11705 PF00085 Thioredoxin DYI28_RS11710 PF02785 Biotin carboxylase C-terminal domain DYI28_RS11710 PF00289 Biotin carboxylase, N-terminal domain DYI28_RS11710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DYI28_RS11715 PF00289 Biotin carboxylase, N-terminal domain DYI28_RS11715 PF00364 Biotin-requiring enzyme DYI28_RS11715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DYI28_RS11715 PF02436 Conserved carboxylase domain DYI28_RS11715 PF02785 Biotin carboxylase C-terminal domain DYI28_RS11715 PF00682 HMGL-like DYI28_RS11720 PF01039 Carboxyl transferase domain DYI28_RS11730 PF01053 Cys/Met metabolism PLP-dependent enzyme DYI28_RS11765 PF13090 Polyphosphate kinase C-terminal domain 2 DYI28_RS11765 PF13089 Polyphosphate kinase N-terminal domain DYI28_RS11765 PF02503 Polyphosphate kinase middle domain DYI28_RS11765 PF17941 Polyphosphate kinase C-terminal domain 1 DYI28_RS11775 PF00483 Nucleotidyl transferase DYI28_RS11780 PF16363 GDP-mannose 4,6 dehydratase DYI28_RS11785 PF01040 UbiA prenyltransferase family DYI28_RS11790 PF00149 Calcineurin-like phosphoesterase DYI28_RS11795 PF01467 Cytidylyltransferase-like DYI28_RS11800 PF00625 Guanylate kinase DYI28_RS11810 PF00814 Glycoprotease family DYI28_RS11820 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DYI28_RS11825 PF01782 RimM N-terminal domain DYI28_RS11835 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DYI28_RS11835 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DYI28_RS11835 PF13288 DXP reductoisomerase C-terminal domain DYI28_RS11840 PF17820 PDZ domain DYI28_RS11840 PF02163 Peptidase family M50 DYI28_RS11855 PF13419 Haloacid dehalogenase-like hydrolase DYI28_RS11860 PF00266 Aminotransferase class-V DYI28_RS11865 PF07690 Major Facilitator Superfamily DYI28_RS11875 PF03477 ATP cone domain DYI28_RS11875 PF13597 Anaerobic ribonucleoside-triphosphate reductase DYI28_RS11930 PF00593 TonB dependent receptor DYI28_RS11930 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS11940 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS11940 PF00593 TonB dependent receptor DYI28_RS11980 PF01510 N-acetylmuramoyl-L-alanine amidase DYI28_RS12000 PF02321 Outer membrane efflux protein DYI28_RS12005 PF00873 AcrB/AcrD/AcrF family DYI28_RS12010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYI28_RS12010 PF00529 HlyD membrane-fusion protein of T1SS DYI28_RS12015 PF12833 Helix-turn-helix domain DYI28_RS12015 PF02311 AraC-like ligand binding domain DYI28_RS12020 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS12020 PF00593 TonB dependent receptor DYI28_RS12050 PF13533 Biotin-lipoyl like DYI28_RS12065 PF00728 Glycosyl hydrolase family 20, catalytic domain DYI28_RS12065 PF02838 Glycosyl hydrolase family 20, domain 2 DYI28_RS12065 PF07691 PA14 domain DYI28_RS12070 PF00728 Glycosyl hydrolase family 20, catalytic domain DYI28_RS12070 PF02838 Glycosyl hydrolase family 20, domain 2 DYI28_RS12070 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain DYI28_RS12070 PF03173 Putative carbohydrate binding domain DYI28_RS12080 PF14322 Starch-binding associating with outer membrane DYI28_RS12080 PF07980 SusD family DYI28_RS12085 PF00593 TonB dependent receptor DYI28_RS12085 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS12100 PF00390 Malic enzyme, N-terminal domain DYI28_RS12100 PF01515 Phosphate acetyl/butaryl transferase DYI28_RS12100 PF03949 Malic enzyme, NAD binding domain DYI28_RS12110 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DYI28_RS12110 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DYI28_RS12115 PF00199 Catalase DYI28_RS12115 PF06628 Catalase-related immune-responsive DYI28_RS12130 PF07804 HipA-like C-terminal domain DYI28_RS12155 PF00326 Prolyl oligopeptidase family DYI28_RS12155 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DYI28_RS12160 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DYI28_RS12160 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DYI28_RS12165 PF01321 Creatinase/Prolidase N-terminal domain DYI28_RS12165 PF00557 Metallopeptidase family M24 DYI28_RS12170 PF00884 Sulfatase DYI28_RS12170 PF16385 Domain of unknown function DYI28_RS12175 PF00884 Sulfatase DYI28_RS12175 PF16385 Domain of unknown function DYI28_RS12185 PF01743 Poly A polymerase head domain DYI28_RS12185 PF13735 tRNA nucleotidyltransferase domain 2 putative DYI28_RS12185 PF12627 Probable RNA and SrmB- binding site of polymerase A DYI28_RS12200 PF01330 RuvA N terminal domain DYI28_RS12200 PF07499 RuvA, C-terminal domain DYI28_RS12205 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain DYI28_RS12205 PF01118 Semialdehyde dehydrogenase, NAD binding domain DYI28_RS12220 PF03006 Haemolysin-III related DYI28_RS12230 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DYI28_RS12235 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS12235 PF00593 TonB dependent receptor DYI28_RS12240 PF00593 TonB dependent receptor DYI28_RS12240 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS12250 PF00158 Sigma-54 interaction domain DYI28_RS12250 PF00072 Response regulator receiver domain DYI28_RS12250 PF02954 Bacterial regulatory protein, Fis family DYI28_RS12255 PF12848 ABC transporter DYI28_RS12255 PF16326 ABC transporter C-terminal domain DYI28_RS12255 PF00005 ABC transporter DYI28_RS12270 PF00873 AcrB/AcrD/AcrF family DYI28_RS12285 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DYI28_RS12285 PF01189 16S rRNA methyltransferase RsmB/F DYI28_RS12285 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF DYI28_RS12295 PF04542 Sigma-70 region 2 DYI28_RS12295 PF08281 Sigma-70, region 4 DYI28_RS12305 PF13396 Phospholipase_D-nuclease N-terminal DYI28_RS12305 PF13091 PLD-like domain DYI28_RS12310 PF00303 Thymidylate synthase DYI28_RS12315 PF00186 Dihydrofolate reductase DYI28_RS12320 PF01037 Lrp/AsnC ligand binding domain DYI28_RS12320 PF13404 AsnC-type helix-turn-helix domain DYI28_RS12350 PF01618 MotA/TolQ/ExbB proton channel family DYI28_RS12360 PF01026 TatD related DNase DYI28_RS12370 PF00348 Polyprenyl synthetase DYI28_RS12380 PF02224 Cytidylate kinase DYI28_RS12385 PF02401 LytB protein DYI28_RS12390 PF00365 Phosphofructokinase DYI28_RS12415 PF00106 short chain dehydrogenase DYI28_RS12420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DYI28_RS12430 PF00285 Citrate synthase, C-terminal domain DYI28_RS12435 PF00180 Isocitrate/isopropylmalate dehydrogenase DYI28_RS12440 PF00330 Aconitase family (aconitate hydratase) DYI28_RS12445 PF13087 AAA domain DYI28_RS12445 PF13086 AAA domain DYI28_RS12445 PF13195 Protein of unknown function (DUF4011) DYI28_RS12455 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DYI28_RS12455 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DYI28_RS12470 PF00205 Thiamine pyrophosphate enzyme, central domain DYI28_RS12470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYI28_RS12470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYI28_RS12475 PF00920 Dehydratase family DYI28_RS12480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYI28_RS12485 PF03313 Serine dehydratase alpha chain DYI28_RS12505 PF01264 Chorismate synthase DYI28_RS12510 PF01546 Peptidase family M20/M25/M40 DYI28_RS12510 PF07687 Peptidase dimerisation domain DYI28_RS12520 PF03781 Sulfatase-modifying factor enzyme 1 DYI28_RS12550 PF01751 Toprim domain DYI28_RS12550 PF01131 DNA topoisomerase DYI28_RS12565 PF00593 TonB dependent receptor DYI28_RS12565 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS12585 PF01642 Methylmalonyl-CoA mutase DYI28_RS12585 PF02310 B12 binding domain DYI28_RS12590 PF01642 Methylmalonyl-CoA mutase DYI28_RS12595 PF02080 TrkA-C domain DYI28_RS12595 PF06826 Predicted Permease Membrane Region DYI28_RS12615 PF02277 Phosphoribosyltransferase DYI28_RS12620 PF02654 Cobalamin-5-phosphate synthase DYI28_RS12625 PF00300 Histidine phosphatase superfamily (branch 1) DYI28_RS12645 PF01032 FecCD transport family DYI28_RS12650 PF00005 ABC transporter DYI28_RS12655 PF06826 Predicted Permease Membrane Region DYI28_RS12655 PF02080 TrkA-C domain DYI28_RS12660 PF00593 TonB dependent receptor DYI28_RS12660 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS12695 PF17678 Glycosyl hydrolase family 92 N-terminal domain DYI28_RS12695 PF07971 Glycosyl hydrolase family 92 DYI28_RS12715 PF07980 SusD family DYI28_RS12715 PF14322 Starch-binding associating with outer membrane DYI28_RS12720 PF00593 TonB dependent receptor DYI28_RS12720 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS12725 PF00480 ROK family DYI28_RS12735 PF07702 UTRA domain DYI28_RS12735 PF00392 Bacterial regulatory proteins, gntR family DYI28_RS12760 PF00873 AcrB/AcrD/AcrF family DYI28_RS12765 PF00529 HlyD membrane-fusion protein of T1SS DYI28_RS12765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYI28_RS12770 PF12833 Helix-turn-helix domain DYI28_RS12775 PF01554 MatE DYI28_RS12780 PF00152 tRNA synthetases class II (D, K and N) DYI28_RS12780 PF01336 OB-fold nucleic acid binding domain DYI28_RS12780 PF14229 Domain of unknown function (DUF4332) DYI28_RS12785 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DYI28_RS12785 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DYI28_RS12790 PF00342 Phosphoglucose isomerase DYI28_RS12805 PF13419 Haloacid dehalogenase-like hydrolase DYI28_RS12825 PF03590 Aspartate-ammonia ligase DYI28_RS12830 PF03167 Uracil DNA glycosylase superfamily DYI28_RS12845 PF07075 Protein of unknown function (DUF1343) DYI28_RS12855 PF04237 YjbR DYI28_RS12875 PF11741 AMIN domain DYI28_RS12875 PF01520 N-acetylmuramoyl-L-alanine amidase DYI28_RS12885 PF00308 Bacterial dnaA protein DYI28_RS12885 PF08299 Bacterial dnaA protein helix-turn-helix DYI28_RS12885 PF11638 DnaA N-terminal domain DYI28_RS12890 PF00881 Nitroreductase family DYI28_RS12895 PF02867 Ribonucleotide reductase, barrel domain DYI28_RS12895 PF03477 ATP cone domain DYI28_RS12895 PF00317 Ribonucleotide reductase, all-alpha domain DYI28_RS12900 PF02446 4-alpha-glucanotransferase DYI28_RS12910 PF02152 Dihydroneopterin aldolase DYI28_RS12915 PF02142 MGS-like domain DYI28_RS12920 PF00535 Glycosyl transferase family 2 DYI28_RS12930 PF04055 Radical SAM superfamily DYI28_RS12930 PF00919 Uncharacterized protein family UPF0004 DYI28_RS12935 PF00501 AMP-binding enzyme DYI28_RS12960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYI28_RS12960 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DYI28_RS12970 PF01281 Ribosomal protein L9, N-terminal domain DYI28_RS12970 PF03948 Ribosomal protein L9, C-terminal domain DYI28_RS12975 PF01084 Ribosomal protein S18 DYI28_RS12980 PF01250 Ribosomal protein S6 DYI28_RS12990 PF00486 Transcriptional regulatory protein, C terminal DYI28_RS12990 PF00072 Response regulator receiver domain DYI28_RS12995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS12995 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS13000 PF03764 Elongation factor G, domain IV DYI28_RS13000 PF00009 Elongation factor Tu GTP binding domain DYI28_RS13000 PF00679 Elongation factor G C-terminus DYI28_RS13000 PF14492 Elongation Factor G, domain II DYI28_RS13005 PF04055 Radical SAM superfamily DYI28_RS13005 PF06969 HemN C-terminal domain DYI28_RS13045 PF03956 Lysine exporter LysO DYI28_RS13060 PF00488 MutS domain V DYI28_RS13060 PF01713 Smr domain DYI28_RS13095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DYI28_RS13105 PF00106 short chain dehydrogenase DYI28_RS13110 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS13110 PF00593 TonB dependent receptor DYI28_RS13125 PF04389 Peptidase family M28 DYI28_RS13125 PF02225 PA domain DYI28_RS13140 PF00950 ABC 3 transport family DYI28_RS13145 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DYI28_RS13170 PF07726 ATPase family associated with various cellular activities (AAA) DYI28_RS13170 PF17863 AAA lid domain DYI28_RS13205 PF00085 Thioredoxin DYI28_RS13215 PF11738 Protein of unknown function (DUF3298) DYI28_RS13215 PF13739 Deacetylase PdaC DYI28_RS13215 PF01522 Polysaccharide deacetylase DYI28_RS13230 PF07980 SusD family DYI28_RS13235 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS13235 PF00593 TonB dependent receptor DYI28_RS13250 PF13181 Tetratricopeptide repeat DYI28_RS13250 PF17128 Domain of unknown function (DUF5107) DYI28_RS13255 PF00083 Sugar (and other) transporter DYI28_RS13260 PF02311 AraC-like ligand binding domain DYI28_RS13260 PF12833 Helix-turn-helix domain DYI28_RS13265 PF01336 OB-fold nucleic acid binding domain DYI28_RS13265 PF07733 Bacterial DNA polymerase III alpha NTPase domain DYI28_RS13265 PF02811 PHP domain DYI28_RS13265 PF14579 Helix-hairpin-helix motif DYI28_RS13265 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DYI28_RS13270 PF02666 Phosphatidylserine decarboxylase DYI28_RS13275 PF01066 CDP-alcohol phosphatidyltransferase DYI28_RS13285 PF14437 MafB19-like deaminase DYI28_RS13295 PF02021 Uncharacterised protein family UPF0102 DYI28_RS13310 PF13004 Putative binding domain, N-terminal DYI28_RS13310 PF00150 Cellulase (glycosyl hydrolase family 5) DYI28_RS13320 PF01554 MatE DYI28_RS13325 PF00696 Amino acid kinase family DYI28_RS13340 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS13340 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYI28_RS13340 PF16355 Domain of unknown function (DUF4982) DYI28_RS13340 PF00703 Glycosyl hydrolases family 2 DYI28_RS13350 PF07980 SusD family DYI28_RS13355 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS13355 PF00593 TonB dependent receptor DYI28_RS13360 PF12833 Helix-turn-helix domain DYI28_RS13360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS13360 PF07495 Y_Y_Y domain DYI28_RS13360 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS13360 PF07494 Two component regulator propeller DYI28_RS13360 PF00072 Response regulator receiver domain DYI28_RS13370 PF01765 Ribosome recycling factor DYI28_RS13375 PF16745 RsgA N-terminal domain DYI28_RS13375 PF03193 RsgA GTPase DYI28_RS13385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYI28_RS13385 PF00529 HlyD membrane-fusion protein of T1SS DYI28_RS13390 PF00873 AcrB/AcrD/AcrF family DYI28_RS13405 PF05681 Fumarate hydratase (Fumerase) DYI28_RS13405 PF05683 Fumarase C-terminus DYI28_RS13420 PF01926 50S ribosome-binding GTPase DYI28_RS13420 PF13167 GTP-binding GTPase N-terminal DYI28_RS13420 PF16360 GTP-binding GTPase Middle Region DYI28_RS13430 PF00593 TonB dependent receptor DYI28_RS13430 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS13440 PF00593 TonB dependent receptor DYI28_RS13440 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS13445 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS13445 PF00589 Phage integrase family DYI28_RS13450 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS13450 PF00593 TonB dependent receptor DYI28_RS13465 PF01914 MarC family integral membrane protein DYI28_RS13480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYI28_RS13490 PF00265 Thymidine kinase DYI28_RS13495 PF01594 AI-2E family transporter DYI28_RS13515 PF13361 UvrD-like helicase C-terminal domain DYI28_RS13515 PF00580 UvrD/REP helicase N-terminal domain DYI28_RS13520 PF00872 Transposase, Mutator family DYI28_RS13530 PF01381 Helix-turn-helix DYI28_RS13540 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS13540 PF00593 TonB dependent receptor DYI28_RS13570 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DYI28_RS13570 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DYI28_RS13575 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DYI28_RS13575 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DYI28_RS13590 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DYI28_RS13595 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYI28_RS13595 PF00672 HAMP domain DYI28_RS13595 PF00072 Response regulator receiver domain DYI28_RS13595 PF01627 Hpt domain DYI28_RS13595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS13595 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS13600 PF00893 Small Multidrug Resistance protein DYI28_RS13615 PF00582 Universal stress protein family DYI28_RS13615 PF00999 Sodium/hydrogen exchanger family DYI28_RS13640 PF12833 Helix-turn-helix domain DYI28_RS13650 PF00392 Bacterial regulatory proteins, gntR family DYI28_RS13650 PF00155 Aminotransferase class I and II DYI28_RS13675 PF01554 MatE DYI28_RS13690 PF00132 Bacterial transferase hexapeptide (six repeats) DYI28_RS13695 PF01037 Lrp/AsnC ligand binding domain DYI28_RS13700 PF01053 Cys/Met metabolism PLP-dependent enzyme DYI28_RS13715 PF00924 Mechanosensitive ion channel DYI28_RS13715 PF05552 Conserved TM helix DYI28_RS13735 PF14821 Threonine synthase N terminus DYI28_RS13735 PF00291 Pyridoxal-phosphate dependent enzyme DYI28_RS13740 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase DYI28_RS13740 PF01676 Metalloenzyme superfamily DYI28_RS13745 PF00742 Homoserine dehydrogenase DYI28_RS13745 PF03447 Homoserine dehydrogenase, NAD binding domain DYI28_RS13745 PF01842 ACT domain DYI28_RS13745 PF00696 Amino acid kinase family DYI28_RS13745 PF13840 ACT domain DYI28_RS13755 PF17763 Glutaminase/Asparaginase C-terminal domain DYI28_RS13755 PF00710 Asparaginase, N-terminal DYI28_RS13760 PF18073 Rubredoxin metal binding domain DYI28_RS13770 PF00072 Response regulator receiver domain DYI28_RS13770 PF00196 Bacterial regulatory proteins, luxR family DYI28_RS13775 PF00593 TonB dependent receptor DYI28_RS13775 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS13780 PF01609 Transposase DDE domain DYI28_RS13780 PF13808 DDE_Tnp_1-associated DYI28_RS13800 PF01136 Peptidase family U32 DYI28_RS13800 PF12392 Collagenase DYI28_RS13805 PF04204 Homoserine O-succinyltransferase DYI28_RS13810 PF00037 4Fe-4S binding domain DYI28_RS13815 PF00155 Aminotransferase class I and II DYI28_RS13820 PF00925 GTP cyclohydrolase II DYI28_RS13820 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DYI28_RS13840 PF00958 GMP synthase C terminal domain DYI28_RS13840 PF02540 NAD synthase DYI28_RS13845 PF14827 Double sensory domain of two-component sensor kinase DYI28_RS13845 PF00672 HAMP domain DYI28_RS13845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS13845 PF13426 PAS domain DYI28_RS13845 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS13850 PF02702 Osmosensitive K+ channel His kinase sensor domain DYI28_RS13850 PF13493 Domain of unknown function (DUF4118) DYI28_RS13850 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS13850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS13860 PF02669 K+-transporting ATPase, c chain DYI28_RS13870 PF03814 Potassium-transporting ATPase A subunit DYI28_RS13885 PF00982 Glycosyltransferase family 20 DYI28_RS13890 PF00723 Glycosyl hydrolases family 15 DYI28_RS13925 PF01609 Transposase DDE domain DYI28_RS13925 PF13808 DDE_Tnp_1-associated DYI28_RS13940 PF10566 Glycoside hydrolase 97 DYI28_RS13940 PF14508 Glycosyl-hydrolase 97 N-terminal DYI28_RS13940 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation DYI28_RS13950 PF00933 Glycosyl hydrolase family 3 N terminal domain DYI28_RS13950 PF14310 Fibronectin type III-like domain DYI28_RS13950 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYI28_RS13955 PF08533 Beta-galactosidase C-terminal domain DYI28_RS13955 PF02449 Beta-galactosidase DYI28_RS13955 PF08532 Beta-galactosidase trimerisation domain DYI28_RS13975 PF00593 TonB dependent receptor DYI28_RS13975 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS13990 PF04542 Sigma-70 region 2 DYI28_RS13990 PF08281 Sigma-70, region 4 DYI28_RS13995 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain DYI28_RS13995 PF00728 Glycosyl hydrolase family 20, catalytic domain DYI28_RS13995 PF02838 Glycosyl hydrolase family 20, domain 2 DYI28_RS13995 PF03173 Putative carbohydrate binding domain DYI28_RS14015 PF14322 Starch-binding associating with outer membrane DYI28_RS14015 PF07980 SusD family DYI28_RS14020 PF00593 TonB dependent receptor DYI28_RS14020 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS14045 PF01343 Peptidase family S49 DYI28_RS14050 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DYI28_RS14055 PF01048 Phosphorylase superfamily DYI28_RS14060 PF00586 AIR synthase related protein, N-terminal domain DYI28_RS14060 PF02769 AIR synthase related protein, C-terminal domain DYI28_RS14080 PF00271 Helicase conserved C-terminal domain DYI28_RS14080 PF00270 DEAD/DEAH box helicase DYI28_RS14085 PF03060 Nitronate monooxygenase DYI28_RS14090 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DYI28_RS14095 PF03167 Uracil DNA glycosylase superfamily DYI28_RS14100 PF00072 Response regulator receiver domain DYI28_RS14100 PF00196 Bacterial regulatory proteins, luxR family DYI28_RS14110 PF13538 UvrD-like helicase C-terminal domain DYI28_RS14115 PF09820 Predicted AAA-ATPase DYI28_RS14115 PF08011 PD-(D/E)XK nuclease superfamily DYI28_RS14120 PF01510 N-acetylmuramoyl-L-alanine amidase DYI28_RS14150 PF00230 Major intrinsic protein DYI28_RS14165 PF00216 Bacterial DNA-binding protein DYI28_RS14195 PF00691 OmpA family DYI28_RS14225 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYI28_RS14225 PF01627 Hpt domain DYI28_RS14225 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS14225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS14225 PF00072 Response regulator receiver domain DYI28_RS14230 PF00072 Response regulator receiver domain DYI28_RS14230 PF02954 Bacterial regulatory protein, Fis family DYI28_RS14230 PF00158 Sigma-54 interaction domain DYI28_RS14255 PF13673 Acetyltransferase (GNAT) domain DYI28_RS14255 PF00958 GMP synthase C terminal domain DYI28_RS14255 PF00117 Glutamine amidotransferase class-I DYI28_RS14255 PF03352 Methyladenine glycosylase DYI28_RS14255 PF13302 Acetyltransferase (GNAT) domain DYI28_RS14365 PF01807 CHC2 zinc finger DYI28_RS14365 PF08275 DNA primase catalytic core, N-terminal domain DYI28_RS14470 PF00145 C-5 cytosine-specific DNA methylase DYI28_RS14475 PF01119 DNA mismatch repair protein, C-terminal domain DYI28_RS14475 PF08676 MutL C terminal dimerisation domain DYI28_RS14495 PF03852 DNA mismatch endonuclease Vsr DYI28_RS14535 PF03807 NADP oxidoreductase coenzyme F420-dependent DYI28_RS14535 PF14748 Pyrroline-5-carboxylate reductase dimerisation DYI28_RS14540 PF00158 Sigma-54 interaction domain DYI28_RS14540 PF00072 Response regulator receiver domain DYI28_RS14540 PF02954 Bacterial regulatory protein, Fis family DYI28_RS14545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYI28_RS14545 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYI28_RS14565 PF00933 Glycosyl hydrolase family 3 N terminal domain DYI28_RS14565 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYI28_RS14570 PF02872 5'-nucleotidase, C-terminal domain DYI28_RS14570 PF00149 Calcineurin-like phosphoesterase DYI28_RS14575 PF00149 Calcineurin-like phosphoesterase DYI28_RS14575 PF02872 5'-nucleotidase, C-terminal domain DYI28_RS14580 PF01245 Ribosomal protein L19 DYI28_RS14585 PF00480 ROK family DYI28_RS14590 PF00005 ABC transporter DYI28_RS14595 PF12704 MacB-like periplasmic core domain DYI28_RS14595 PF02687 FtsX-like permease family DYI28_RS14595 PF00005 ABC transporter DYI28_RS14600 PF00005 ABC transporter DYI28_RS14600 PF02687 FtsX-like permease family DYI28_RS14600 PF12704 MacB-like periplasmic core domain DYI28_RS14615 PF01641 SelR domain DYI28_RS14615 PF01625 Peptide methionine sulfoxide reductase DYI28_RS14625 PF00912 Transglycosylase DYI28_RS14645 PF13509 S1 domain DYI28_RS14645 PF17783 CvfB-like winged helix domain DYI28_RS14650 PF00056 lactate/malate dehydrogenase, NAD binding domain DYI28_RS14650 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DYI28_RS14665 PF00403 Heavy-metal-associated domain DYI28_RS14675 PF04542 Sigma-70 region 2 DYI28_RS14675 PF08281 Sigma-70, region 4 DYI28_RS14685 PF00593 TonB dependent receptor DYI28_RS14685 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS14715 PF04551 GcpE protein DYI28_RS14720 PF00731 AIR carboxylase DYI28_RS14725 PF01597 Glycine cleavage H-protein DYI28_RS14735 PF04552 Sigma-54, DNA binding domain DYI28_RS14735 PF00309 Sigma-54 factor, Activator interacting domain (AID) DYI28_RS14735 PF04963 Sigma-54 factor, core binding domain DYI28_RS14740 PF00557 Metallopeptidase family M24 DYI28_RS14740 PF05195 Aminopeptidase P, N-terminal domain DYI28_RS14745 PF05448 Acetyl xylan esterase (AXE1) DYI28_RS14755 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DYI28_RS14755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYI28_RS14755 PF03129 Anticodon binding domain DYI28_RS14760 PF02690 Na+/Pi-cotransporter DYI28_RS14770 PF00301 Rubredoxin DYI28_RS14775 PF00672 HAMP domain DYI28_RS14775 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYI28_RS14775 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS14775 PF01627 Hpt domain DYI28_RS14775 PF00072 Response regulator receiver domain DYI28_RS14775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS14780 PF00690 Cation transporter/ATPase, N-terminus DYI28_RS14780 PF00689 Cation transporting ATPase, C-terminus DYI28_RS14785 PF13419 Haloacid dehalogenase-like hydrolase DYI28_RS14790 PF01687 Riboflavin kinase DYI28_RS14790 PF06574 FAD synthetase DYI28_RS14795 PF02517 CPBP intramembrane metalloprotease DYI28_RS14800 PF02657 Fe-S metabolism associated domain DYI28_RS14805 PF04389 Peptidase family M28 DYI28_RS14810 PF17676 LD-carboxypeptidase C-terminal domain DYI28_RS14810 PF02016 LD-carboxypeptidase N-terminal domain DYI28_RS14815 PF02018 Carbohydrate binding domain DYI28_RS14815 PF00722 Glycosyl hydrolases family 16 DYI28_RS14820 PF01515 Phosphate acetyl/butaryl transferase DYI28_RS14825 PF00871 Acetokinase family DYI28_RS14830 PF07971 Glycosyl hydrolase family 92 DYI28_RS14830 PF17678 Glycosyl hydrolase family 92 N-terminal domain DYI28_RS14850 PF01138 3' exoribonuclease family, domain 1 DYI28_RS14850 PF00575 S1 RNA binding domain DYI28_RS14850 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DYI28_RS14850 PF00013 KH domain DYI28_RS14850 PF03725 3' exoribonuclease family, domain 2 DYI28_RS14860 PF03449 Transcription elongation factor, N-terminal DYI28_RS14860 PF01272 Transcription elongation factor, GreA/GreB, C-term DYI28_RS14865 PF01230 HIT domain DYI28_RS14880 PF00282 Pyridoxal-dependent decarboxylase conserved domain DYI28_RS14885 PF04960 Glutaminase DYI28_RS14895 PF13520 Amino acid permease DYI28_RS14900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS14900 PF00072 Response regulator receiver domain DYI28_RS14900 PF09308 LuxQ, periplasmic DYI28_RS14900 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS14915 PF17801 Alpha galactosidase C-terminal beta sandwich domain DYI28_RS14915 PF16499 Alpha galactosidase A DYI28_RS14935 PF00005 ABC transporter DYI28_RS14945 PF12849 PBP superfamily domain DYI28_RS15015 PF00248 Aldo/keto reductase family DYI28_RS15020 PF03062 MBOAT, membrane-bound O-acyltransferase family DYI28_RS15040 PF00873 AcrB/AcrD/AcrF family DYI28_RS15055 PF00440 Bacterial regulatory proteins, tetR family DYI28_RS15060 PF00221 Aromatic amino acid lyase DYI28_RS15070 PF01979 Amidohydrolase family DYI28_RS15075 PF02971 Formiminotransferase domain DYI28_RS15075 PF07837 Formiminotransferase domain, N-terminal subdomain DYI28_RS15080 PF17392 Urocanase C-terminal domain DYI28_RS15080 PF01175 Urocanase Rossmann-like domain DYI28_RS15080 PF17391 Urocanase N-terminal domain DYI28_RS15090 PF05190 MutS family domain IV DYI28_RS15090 PF05192 MutS domain III DYI28_RS15090 PF05188 MutS domain II DYI28_RS15090 PF00488 MutS domain V DYI28_RS15090 PF01624 MutS domain I DYI28_RS15105 PF01196 Ribosomal protein L17 DYI28_RS15110 PF01000 RNA polymerase Rpb3/RpoA insert domain DYI28_RS15110 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DYI28_RS15110 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DYI28_RS15115 PF01479 S4 domain DYI28_RS15115 PF00163 Ribosomal protein S4/S9 N-terminal domain DYI28_RS15120 PF00411 Ribosomal protein S11 DYI28_RS15125 PF00416 Ribosomal protein S13/S18 DYI28_RS15130 PF00444 Ribosomal protein L36 DYI28_RS15135 PF01176 Translation initiation factor 1A / IF-1 DYI28_RS15140 PF00557 Metallopeptidase family M24 DYI28_RS15145 PF00344 SecY translocase DYI28_RS15150 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DYI28_RS15155 PF00327 Ribosomal protein L30p/L7e DYI28_RS15160 PF00333 Ribosomal protein S5, N-terminal domain DYI28_RS15160 PF03719 Ribosomal protein S5, C-terminal domain DYI28_RS15165 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DYI28_RS15170 PF00347 Ribosomal protein L6 DYI28_RS15175 PF00410 Ribosomal protein S8 DYI28_RS15180 PF00253 Ribosomal protein S14p/S29e DYI28_RS15185 PF00281 Ribosomal protein L5 DYI28_RS15185 PF00673 ribosomal L5P family C-terminus DYI28_RS15190 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DYI28_RS15190 PF00467 KOW motif DYI28_RS15195 PF00238 Ribosomal protein L14p/L23e DYI28_RS15200 PF00366 Ribosomal protein S17 DYI28_RS15205 PF00831 Ribosomal L29 protein DYI28_RS15210 PF00252 Ribosomal protein L16p/L10e DYI28_RS15215 PF07650 KH domain DYI28_RS15215 PF00189 Ribosomal protein S3, C-terminal domain DYI28_RS15220 PF00237 Ribosomal protein L22p/L17e DYI28_RS15225 PF00203 Ribosomal protein S19 DYI28_RS15230 PF03947 Ribosomal Proteins L2, C-terminal domain DYI28_RS15230 PF00181 Ribosomal Proteins L2, RNA binding domain DYI28_RS15235 PF00276 Ribosomal protein L23 DYI28_RS15240 PF00573 Ribosomal protein L4/L1 family DYI28_RS15245 PF00297 Ribosomal protein L3 DYI28_RS15250 PF00338 Ribosomal protein S10p/S20e DYI28_RS15255 PF14492 Elongation Factor G, domain II DYI28_RS15255 PF00679 Elongation factor G C-terminus DYI28_RS15255 PF03144 Elongation factor Tu domain 2 DYI28_RS15255 PF00009 Elongation factor Tu GTP binding domain DYI28_RS15255 PF03764 Elongation factor G, domain IV DYI28_RS15260 PF00177 Ribosomal protein S7p/S5e DYI28_RS15265 PF00164 Ribosomal protein S12/S23 DYI28_RS15275 PF04997 RNA polymerase Rpb1, domain 1 DYI28_RS15275 PF00623 RNA polymerase Rpb1, domain 2 DYI28_RS15275 PF04983 RNA polymerase Rpb1, domain 3 DYI28_RS15275 PF05000 RNA polymerase Rpb1, domain 4 DYI28_RS15275 PF04998 RNA polymerase Rpb1, domain 5 DYI28_RS15280 PF04563 RNA polymerase beta subunit DYI28_RS15280 PF04560 RNA polymerase Rpb2, domain 7 DYI28_RS15280 PF00562 RNA polymerase Rpb2, domain 6 DYI28_RS15280 PF10385 RNA polymerase beta subunit external 1 domain DYI28_RS15280 PF04565 RNA polymerase Rpb2, domain 3 DYI28_RS15280 PF04561 RNA polymerase Rpb2, domain 2 DYI28_RS15285 PF16320 Ribosomal protein L7/L12 dimerisation domain DYI28_RS15285 PF00542 Ribosomal protein L7/L12 C-terminal domain DYI28_RS15290 PF00466 Ribosomal protein L10 DYI28_RS15295 PF00687 Ribosomal protein L1p/L10e family DYI28_RS15300 PF03946 Ribosomal protein L11, N-terminal domain DYI28_RS15300 PF00298 Ribosomal protein L11, RNA binding domain DYI28_RS15305 PF00467 KOW motif DYI28_RS15305 PF02357 Transcription termination factor nusG DYI28_RS15310 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DYI28_RS15320 PF03143 Elongation factor Tu C-terminal domain DYI28_RS15320 PF03144 Elongation factor Tu domain 2 DYI28_RS15320 PF00009 Elongation factor Tu GTP binding domain DYI28_RS15350 PF00589 Phage integrase family DYI28_RS15350 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS15355 PF01165 Ribosomal protein S21 DYI28_RS15365 PF01321 Creatinase/Prolidase N-terminal domain DYI28_RS15365 PF00557 Metallopeptidase family M24 DYI28_RS15370 PF00132 Bacterial transferase hexapeptide (six repeats) DYI28_RS15380 PF00085 Thioredoxin DYI28_RS15395 PF00749 tRNA synthetases class I (E and Q), catalytic domain DYI28_RS15400 PF07698 7TM receptor with intracellular HD hydrolase DYI28_RS15400 PF07697 7TM-HD extracellular DYI28_RS15400 PF01966 HD domain DYI28_RS15405 PF01451 Low molecular weight phosphotyrosine protein phosphatase DYI28_RS15415 PF04851 Type III restriction enzyme, res subunit DYI28_RS15415 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DYI28_RS15415 PF18074 Primosomal protein N C-terminal domain DYI28_RS15415 PF17764 3′ DNA-binding domain (3′BD) DYI28_RS15415 PF00271 Helicase conserved C-terminal domain DYI28_RS15430 PF08281 Sigma-70, region 4 DYI28_RS15430 PF04542 Sigma-70 region 2 DYI28_RS15460 PF13276 HTH-like domain DYI28_RS15460 PF13333 Integrase core domain DYI28_RS15460 PF00665 Integrase core domain DYI28_RS15470 PF07495 Y_Y_Y domain DYI28_RS15470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS15470 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS15470 PF12833 Helix-turn-helix domain DYI28_RS15470 PF00072 Response regulator receiver domain DYI28_RS15470 PF07494 Two component regulator propeller DYI28_RS15475 PF00593 TonB dependent receptor DYI28_RS15475 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS15480 PF14322 Starch-binding associating with outer membrane DYI28_RS15480 PF07980 SusD family DYI28_RS15500 PF01348 Type II intron maturase DYI28_RS15500 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DYI28_RS15510 PF13149 Fimbrillin-like DYI28_RS15530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS15530 PF00072 Response regulator receiver domain DYI28_RS15530 PF07494 Two component regulator propeller DYI28_RS15530 PF12833 Helix-turn-helix domain DYI28_RS15530 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS15530 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS15530 PF07495 Y_Y_Y domain DYI28_RS15530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS15530 PF07495 Y_Y_Y domain DYI28_RS15530 PF00072 Response regulator receiver domain DYI28_RS15530 PF07494 Two component regulator propeller DYI28_RS15530 PF12833 Helix-turn-helix domain DYI28_RS15665 PF04170 NlpE N-terminal domain DYI28_RS15665 PF17185 NlpE C-terminal OB domain DYI28_RS15695 PF13505 Outer membrane protein beta-barrel domain DYI28_RS15695 PF00691 OmpA family DYI28_RS15715 PF02535 ZIP Zinc transporter DYI28_RS15725 PF00005 ABC transporter DYI28_RS15725 PF00664 ABC transporter transmembrane region DYI28_RS15725 PF04954 Siderophore-interacting protein DYI28_RS15725 PF08021 Siderophore-interacting FAD-binding domain DYI28_RS15730 PF00005 ABC transporter DYI28_RS15730 PF00664 ABC transporter transmembrane region DYI28_RS15750 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS15750 PF00593 TonB dependent receptor DYI28_RS15760 PF13333 Integrase core domain DYI28_RS15760 PF00665 Integrase core domain DYI28_RS15780 PF12850 Calcineurin-like phosphoesterase superfamily domain DYI28_RS15830 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DYI28_RS15830 PF01348 Type II intron maturase DYI28_RS15925 PF00206 Lyase DYI28_RS15925 PF10415 Fumarase C C-terminus DYI28_RS15930 PF03605 Anaerobic c4-dicarboxylate membrane transporter DYI28_RS15935 PF00710 Asparaginase, N-terminal DYI28_RS15935 PF17763 Glutaminase/Asparaginase C-terminal domain DYI28_RS15950 PF01923 Cobalamin adenosyltransferase DYI28_RS15985 PF01435 Peptidase family M48 DYI28_RS16015 PF02321 Outer membrane efflux protein DYI28_RS16020 PF00873 AcrB/AcrD/AcrF family DYI28_RS16025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYI28_RS16030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS16030 PF06580 Histidine kinase DYI28_RS16035 PF04397 LytTr DNA-binding domain DYI28_RS16035 PF00072 Response regulator receiver domain DYI28_RS16045 PF01050 Mannose-6-phosphate isomerase DYI28_RS16045 PF00483 Nucleotidyl transferase DYI28_RS16050 PF13193 AMP-binding enzyme C-terminal domain DYI28_RS16050 PF00501 AMP-binding enzyme DYI28_RS16065 PF00312 Ribosomal protein S15 DYI28_RS16070 PF03144 Elongation factor Tu domain 2 DYI28_RS16070 PF00679 Elongation factor G C-terminus DYI28_RS16070 PF00009 Elongation factor Tu GTP binding domain DYI28_RS16085 PF02417 Chromate transporter DYI28_RS16100 PF01293 Phosphoenolpyruvate carboxykinase DYI28_RS16120 PF13533 Biotin-lipoyl like DYI28_RS16150 PF05221 S-adenosyl-L-homocysteine hydrolase DYI28_RS16150 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DYI28_RS16155 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYI28_RS16155 PF00072 Response regulator receiver domain DYI28_RS16155 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS16155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS16155 PF00672 HAMP domain DYI28_RS16155 PF01627 Hpt domain DYI28_RS16160 PF13180 PDZ domain DYI28_RS16160 PF03572 Peptidase family S41 DYI28_RS16165 PF00294 pfkB family carbohydrate kinase DYI28_RS16180 PF00156 Phosphoribosyl transferase domain DYI28_RS16185 PF00459 Inositol monophosphatase family DYI28_RS16225 PF02447 GntP family permease DYI28_RS16230 PF02595 Glycerate kinase family DYI28_RS16250 PF00593 TonB dependent receptor DYI28_RS16250 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS16260 PF00356 Bacterial regulatory proteins, lacI family DYI28_RS16265 PF00294 pfkB family carbohydrate kinase DYI28_RS16270 PF00593 TonB dependent receptor DYI28_RS16270 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS16295 PF01476 LysM domain DYI28_RS16295 PF00756 Putative esterase DYI28_RS16300 PF00756 Putative esterase DYI28_RS16300 PF00331 Glycosyl hydrolase family 10 DYI28_RS16335 PF00593 TonB dependent receptor DYI28_RS16335 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS16340 PF12833 Helix-turn-helix domain DYI28_RS16340 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS16340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS16340 PF00072 Response regulator receiver domain DYI28_RS16340 PF07494 Two component regulator propeller DYI28_RS16340 PF07495 Y_Y_Y domain DYI28_RS16350 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYI28_RS16350 PF13192 Thioredoxin domain DYI28_RS16355 PF10417 C-terminal domain of 1-Cys peroxiredoxin DYI28_RS16355 PF00578 AhpC/TSA family DYI28_RS16360 PF09297 NADH pyrophosphatase zinc ribbon domain DYI28_RS16360 PF00293 NUDIX domain DYI28_RS16390 PF01131 DNA topoisomerase DYI28_RS16390 PF01751 Toprim domain DYI28_RS16390 PF13368 Topoisomerase C-terminal repeat DYI28_RS16405 PF03485 Arginyl tRNA synthetase N terminal domain DYI28_RS16405 PF00750 tRNA synthetases class I (R) DYI28_RS16405 PF05746 DALR anticodon binding domain DYI28_RS16410 PF00216 Bacterial DNA-binding protein DYI28_RS16415 PF01694 Rhomboid family DYI28_RS16430 PF01432 Peptidase family M3 DYI28_RS16435 PF02355 Protein export membrane protein DYI28_RS16435 PF07549 SecD/SecF GG Motif DYI28_RS16445 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DYI28_RS16445 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DYI28_RS16445 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DYI28_RS16450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYI28_RS16465 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYI28_RS16465 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS16465 PF00703 Glycosyl hydrolases family 2 DYI28_RS16470 PF05448 Acetyl xylan esterase (AXE1) DYI28_RS16475 PF16875 Glycosyl hydrolase family 36 N-terminal domain DYI28_RS16475 PF16874 Glycosyl hydrolase family 36 C-terminal domain DYI28_RS16480 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYI28_RS16480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYI28_RS16485 PF07470 Glycosyl Hydrolase Family 88 DYI28_RS16490 PF07691 PA14 domain DYI28_RS16490 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYI28_RS16490 PF00933 Glycosyl hydrolase family 3 N terminal domain DYI28_RS16490 PF14310 Fibronectin type III-like domain DYI28_RS16495 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYI28_RS16495 PF00933 Glycosyl hydrolase family 3 N terminal domain DYI28_RS16495 PF14310 Fibronectin type III-like domain DYI28_RS16525 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS16525 PF00593 TonB dependent receptor DYI28_RS16545 PF02687 FtsX-like permease family DYI28_RS16545 PF12704 MacB-like periplasmic core domain DYI28_RS16550 PF02033 Ribosome-binding factor A DYI28_RS16555 PF01596 O-methyltransferase DYI28_RS16560 PF02887 Pyruvate kinase, alpha/beta domain DYI28_RS16560 PF00224 Pyruvate kinase, barrel domain DYI28_RS16565 PF01220 Dehydroquinase class II DYI28_RS16570 PF00589 Phage integrase family DYI28_RS16570 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS16585 PF13335 Magnesium chelatase, subunit ChlI C-terminal DYI28_RS16585 PF01078 Magnesium chelatase, subunit ChlI DYI28_RS16590 PF07689 KaiB domain DYI28_RS16590 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS16590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS16605 PF13614 AAA domain DYI28_RS16605 PF02706 Chain length determinant protein DYI28_RS16605 PF13807 G-rich domain on putative tyrosine kinase DYI28_RS16615 PF13439 Glycosyltransferase Family 4 DYI28_RS16620 PF00534 Glycosyl transferases group 1 DYI28_RS16625 PF00534 Glycosyl transferases group 1 DYI28_RS16635 PF00535 Glycosyl transferase family 2 DYI28_RS16660 PF00535 Glycosyl transferase family 2 DYI28_RS16670 PF01501 Glycosyl transferase family 8 DYI28_RS16670 PF00535 Glycosyl transferase family 2 DYI28_RS16680 PF14667 Polysaccharide biosynthesis C-terminal domain DYI28_RS16695 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DYI28_RS16700 PF00535 Glycosyl transferase family 2 DYI28_RS16710 PF08889 WbqC-like protein family DYI28_RS16715 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DYI28_RS16725 PF01370 NAD dependent epimerase/dehydratase family DYI28_RS16730 PF00953 Glycosyl transferase family 4 DYI28_RS16745 PF00589 Phage integrase family DYI28_RS16745 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS16750 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS16750 PF00589 Phage integrase family DYI28_RS16775 PF12950 TaqI-like C-terminal specificity domain DYI28_RS16775 PF07669 Eco57I restriction-modification methylase DYI28_RS16825 PF00593 TonB dependent receptor DYI28_RS16825 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS16830 PF13614 AAA domain DYI28_RS16860 PF00005 ABC transporter DYI28_RS16865 PF01032 FecCD transport family DYI28_RS16930 PF07980 SusD family DYI28_RS16930 PF14322 Starch-binding associating with outer membrane DYI28_RS16935 PF00593 TonB dependent receptor DYI28_RS16935 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS16945 PF13802 Galactose mutarotase-like DYI28_RS16945 PF17137 Domain of unknown function (DUF5110) DYI28_RS16945 PF01055 Glycosyl hydrolases family 31 DYI28_RS16945 PF16338 Domain of unknown function (DUF4968) DYI28_RS16950 PF04616 Glycosyl hydrolases family 43 DYI28_RS16970 PF00593 TonB dependent receptor DYI28_RS16970 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS16980 PF03633 Glycosyl hydrolase family 65, C-terminal domain DYI28_RS16980 PF03636 Glycosyl hydrolase family 65, N-terminal domain DYI28_RS16980 PF03632 Glycosyl hydrolase family 65 central catalytic domain DYI28_RS16990 PF07494 Two component regulator propeller DYI28_RS16990 PF07495 Y_Y_Y domain DYI28_RS16990 PF00072 Response regulator receiver domain DYI28_RS16990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS16990 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS16990 PF12833 Helix-turn-helix domain DYI28_RS17010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYI28_RS17020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DYI28_RS17020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYI28_RS17025 PF04616 Glycosyl hydrolases family 43 DYI28_RS17030 PF07495 Y_Y_Y domain DYI28_RS17030 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS17030 PF00072 Response regulator receiver domain DYI28_RS17030 PF07494 Two component regulator propeller DYI28_RS17030 PF12833 Helix-turn-helix domain DYI28_RS17030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS17035 PF13380 CoA binding domain DYI28_RS17035 PF13607 Succinyl-CoA ligase like flavodoxin domain DYI28_RS17045 PF01588 Putative tRNA binding domain DYI28_RS17045 PF09334 tRNA synthetases class I (M) DYI28_RS17045 PF08264 Anticodon-binding domain of tRNA DYI28_RS17060 PF04991 LicD family DYI28_RS17075 PF13439 Glycosyltransferase Family 4 DYI28_RS17075 PF00534 Glycosyl transferases group 1 DYI28_RS17080 PF00535 Glycosyl transferase family 2 DYI28_RS17095 PF12833 Helix-turn-helix domain DYI28_RS17105 PF02146 Sir2 family DYI28_RS17110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYI28_RS17110 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DYI28_RS17115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYI28_RS17115 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DYI28_RS17145 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DYI28_RS17145 PF18766 SWI2/SNF2 ATPase DYI28_RS17145 PF12008 Type I restriction and modification enzyme - subunit R C terminal DYI28_RS17170 PF01420 Type I restriction modification DNA specificity domain DYI28_RS17175 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS17175 PF00589 Phage integrase family DYI28_RS17230 PF00589 Phage integrase family DYI28_RS17230 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS17250 PF08281 Sigma-70, region 4 DYI28_RS17250 PF04542 Sigma-70 region 2 DYI28_RS17295 PF01699 Sodium/calcium exchanger protein DYI28_RS17305 PF00942 Cellulose binding domain DYI28_RS17305 PF00150 Cellulase (glycosyl hydrolase family 5) DYI28_RS17310 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS17310 PF00593 TonB dependent receptor DYI28_RS17315 PF07980 SusD family DYI28_RS17315 PF14322 Starch-binding associating with outer membrane DYI28_RS17325 PF00150 Cellulase (glycosyl hydrolase family 5) DYI28_RS17330 PF00703 Glycosyl hydrolases family 2 DYI28_RS17330 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYI28_RS17330 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS17330 PF02929 Beta galactosidase small chain DYI28_RS17330 PF16353 Domain of unknown function(DUF4981) DYI28_RS17335 PF00150 Cellulase (glycosyl hydrolase family 5) DYI28_RS17345 PF04041 beta-1,4-mannooligosaccharide phosphorylase DYI28_RS17355 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain DYI28_RS17355 PF08531 Alpha-L-rhamnosidase N-terminal domain DYI28_RS17355 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain DYI28_RS17355 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain DYI28_RS17375 PF00986 DNA gyrase B subunit, carboxyl terminus DYI28_RS17375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS17375 PF01751 Toprim domain DYI28_RS17375 PF00204 DNA gyrase B DYI28_RS17380 PF01467 Cytidylyltransferase-like DYI28_RS17385 PF03572 Peptidase family S41 DYI28_RS17385 PF17820 PDZ domain DYI28_RS17385 PF01471 Putative peptidoglycan binding domain DYI28_RS17390 PF14310 Fibronectin type III-like domain DYI28_RS17390 PF00933 Glycosyl hydrolase family 3 N terminal domain DYI28_RS17390 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYI28_RS17395 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS17395 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYI28_RS17395 PF00703 Glycosyl hydrolases family 2 DYI28_RS17395 PF16355 Domain of unknown function (DUF4982) DYI28_RS17395 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DYI28_RS17400 PF17137 Domain of unknown function (DUF5110) DYI28_RS17400 PF16338 Domain of unknown function (DUF4968) DYI28_RS17400 PF01055 Glycosyl hydrolases family 31 DYI28_RS17405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS17405 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS17405 PF12833 Helix-turn-helix domain DYI28_RS17405 PF07494 Two component regulator propeller DYI28_RS17405 PF00072 Response regulator receiver domain DYI28_RS17405 PF07495 Y_Y_Y domain DYI28_RS17410 PF00150 Cellulase (glycosyl hydrolase family 5) DYI28_RS17410 PF13004 Putative binding domain, N-terminal DYI28_RS17415 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DYI28_RS17415 PF04616 Glycosyl hydrolases family 43 DYI28_RS17435 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS17435 PF00593 TonB dependent receptor DYI28_RS17440 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYI28_RS17440 PF00933 Glycosyl hydrolase family 3 N terminal domain DYI28_RS17440 PF14310 Fibronectin type III-like domain DYI28_RS17450 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS17450 PF00589 Phage integrase family DYI28_RS17490 PF01348 Type II intron maturase DYI28_RS17490 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DYI28_RS17570 PF00933 Glycosyl hydrolase family 3 N terminal domain DYI28_RS17570 PF14310 Fibronectin type III-like domain DYI28_RS17570 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYI28_RS17585 PF14322 Starch-binding associating with outer membrane DYI28_RS17585 PF07980 SusD family DYI28_RS17590 PF00593 TonB dependent receptor DYI28_RS17590 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS17600 PF03447 Homoserine dehydrogenase, NAD binding domain DYI28_RS17600 PF01958 Domain of unknown function DUF108 DYI28_RS17635 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS17635 PF00593 TonB dependent receptor DYI28_RS17645 PF05547 Immune inhibitor A peptidase M6 DYI28_RS17645 PF00801 PKD domain DYI28_RS17655 PF03009 Glycerophosphoryl diester phosphodiesterase family DYI28_RS17670 PF00675 Insulinase (Peptidase family M16) DYI28_RS17670 PF05193 Peptidase M16 inactive domain DYI28_RS17675 PF03641 Possible lysine decarboxylase DYI28_RS17680 PF01380 SIS domain DYI28_RS17680 PF00571 CBS domain DYI28_RS17685 PF00294 pfkB family carbohydrate kinase DYI28_RS17710 PF00270 DEAD/DEAH box helicase DYI28_RS17710 PF00271 Helicase conserved C-terminal domain DYI28_RS17715 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYI28_RS17715 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS17715 PF00703 Glycosyl hydrolases family 2 DYI28_RS17730 PF10459 Peptidase S46 DYI28_RS17750 PF05491 RuvB C-terminal winged helix domain DYI28_RS17750 PF05496 Holliday junction DNA helicase RuvB P-loop domain DYI28_RS17750 PF17864 RuvB AAA lid domain DYI28_RS17755 PF07670 Nucleoside recognition DYI28_RS17760 PF02130 Uncharacterized protein family UPF0054 DYI28_RS17800 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS17800 PF00593 TonB dependent receptor DYI28_RS17840 PF01134 Glucose inhibited division protein A DYI28_RS17840 PF13932 GidA associated domain DYI28_RS17845 PF00156 Phosphoribosyl transferase domain DYI28_RS17850 PF01541 GIY-YIG catalytic domain DYI28_RS17850 PF08459 UvrC Helix-hairpin-helix N-terminal DYI28_RS17855 PF02580 D-Tyr-tRNA(Tyr) deacylase DYI28_RS17860 PF03819 MazG nucleotide pyrophosphohydrolase domain DYI28_RS17865 PF01791 DeoC/LacD family aldolase DYI28_RS17880 PF00348 Polyprenyl synthetase DYI28_RS17885 PF00476 DNA polymerase family A DYI28_RS17885 PF01612 3'-5' exonuclease DYI28_RS17885 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DYI28_RS17885 PF01367 5'-3' exonuclease, C-terminal SAM fold DYI28_RS17895 PF04397 LytTr DNA-binding domain DYI28_RS17895 PF00072 Response regulator receiver domain DYI28_RS17900 PF07694 5TMR of 5TMR-LYT DYI28_RS17900 PF06580 Histidine kinase DYI28_RS17900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS17905 PF00132 Bacterial transferase hexapeptide (six repeats) DYI28_RS17910 PF02926 THUMP domain DYI28_RS17910 PF01170 Putative RNA methylase family UPF0020 DYI28_RS17910 PF10672 S-adenosylmethionine-dependent methyltransferase DYI28_RS17920 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DYI28_RS17920 PF00326 Prolyl oligopeptidase family DYI28_RS17925 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DYI28_RS17925 PF02844 Phosphoribosylglycinamide synthetase, N domain DYI28_RS17925 PF02843 Phosphoribosylglycinamide synthetase, C domain DYI28_RS17940 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DYI28_RS17940 PF01266 FAD dependent oxidoreductase DYI28_RS17950 PF00005 ABC transporter DYI28_RS17960 PF11738 Protein of unknown function (DUF3298) DYI28_RS17960 PF01522 Polysaccharide deacetylase DYI28_RS17960 PF13739 Deacetylase PdaC DYI28_RS18015 PF04962 KduI/IolB family DYI28_RS18025 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS18025 PF00593 TonB dependent receptor DYI28_RS18035 PF09308 LuxQ, periplasmic DYI28_RS18035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS18035 PF00072 Response regulator receiver domain DYI28_RS18035 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS18050 PF00579 tRNA synthetases class I (W and Y) DYI28_RS18060 PF01809 Putative membrane protein insertion efficiency factor DYI28_RS18065 PF00825 Ribonuclease P DYI28_RS18080 PF03641 Possible lysine decarboxylase DYI28_RS18115 PF00438 S-adenosylmethionine synthetase, N-terminal domain DYI28_RS18115 PF02772 S-adenosylmethionine synthetase, central domain DYI28_RS18115 PF02773 S-adenosylmethionine synthetase, C-terminal domain DYI28_RS18125 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DYI28_RS18130 PF02547 Queuosine biosynthesis protein DYI28_RS18135 PF16198 tRNA pseudouridylate synthase B C-terminal domain DYI28_RS18135 PF01509 TruB family pseudouridylate synthase (N terminal domain) DYI28_RS18140 PF02673 Bacitracin resistance protein BacA DYI28_RS18150 PF18075 FtsX extracellular domain DYI28_RS18175 PF01510 N-acetylmuramoyl-L-alanine amidase DYI28_RS18200 PF04055 Radical SAM superfamily DYI28_RS18200 PF00919 Uncharacterized protein family UPF0004 DYI28_RS18200 PF01938 TRAM domain DYI28_RS18210 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DYI28_RS18210 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DYI28_RS18215 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DYI28_RS18225 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYI28_RS18225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYI28_RS18235 PF02910 Fumarate reductase flavoprotein C-term DYI28_RS18235 PF00890 FAD binding domain DYI28_RS18245 PF04041 beta-1,4-mannooligosaccharide phosphorylase DYI28_RS18260 PF00593 TonB dependent receptor DYI28_RS18260 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS18275 PF07495 Y_Y_Y domain DYI28_RS18275 PF00072 Response regulator receiver domain DYI28_RS18275 PF12833 Helix-turn-helix domain DYI28_RS18275 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS18275 PF07494 Two component regulator propeller DYI28_RS18275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS18280 PF02915 Rubrerythrin DYI28_RS18285 PF01740 STAS domain DYI28_RS18285 PF00916 Sulfate permease family DYI28_RS18290 PF00728 Glycosyl hydrolase family 20, catalytic domain DYI28_RS18290 PF07691 PA14 domain DYI28_RS18290 PF02838 Glycosyl hydrolase family 20, domain 2 DYI28_RS18305 PF00593 TonB dependent receptor DYI28_RS18305 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS18310 PF00041 Fibronectin type III domain DYI28_RS18310 PF00704 Glycosyl hydrolases family 18 DYI28_RS18335 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS18335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS18335 PF07495 Y_Y_Y domain DYI28_RS18335 PF00072 Response regulator receiver domain DYI28_RS18335 PF12833 Helix-turn-helix domain DYI28_RS18335 PF07495 Y_Y_Y domain DYI28_RS18335 PF00072 Response regulator receiver domain DYI28_RS18335 PF07494 Two component regulator propeller DYI28_RS18335 PF12833 Helix-turn-helix domain DYI28_RS18335 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS18335 PF07494 Two component regulator propeller DYI28_RS18335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS18340 PF02321 Outer membrane efflux protein DYI28_RS18345 PF00873 AcrB/AcrD/AcrF family DYI28_RS18350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYI28_RS18360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS18360 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS18360 PF07495 Y_Y_Y domain DYI28_RS18360 PF00072 Response regulator receiver domain DYI28_RS18360 PF07494 Two component regulator propeller DYI28_RS18360 PF12833 Helix-turn-helix domain DYI28_RS18365 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS18365 PF00593 TonB dependent receptor DYI28_RS18385 PF07470 Glycosyl Hydrolase Family 88 DYI28_RS18400 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS18400 PF00593 TonB dependent receptor DYI28_RS18405 PF14322 Starch-binding associating with outer membrane DYI28_RS18405 PF07980 SusD family DYI28_RS18430 PF04055 Radical SAM superfamily DYI28_RS18430 PF01018 GTP1/OBG DYI28_RS18430 PF01926 50S ribosome-binding GTPase DYI28_RS18445 PF00588 SpoU rRNA Methylase family DYI28_RS18445 PF08032 RNA 2'-O ribose methyltransferase substrate binding DYI28_RS18455 PF02445 Quinolinate synthetase A protein DYI28_RS18460 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYI28_RS18460 PF00933 Glycosyl hydrolase family 3 N terminal domain DYI28_RS18460 PF14310 Fibronectin type III-like domain DYI28_RS18470 PF00703 Glycosyl hydrolases family 2 DYI28_RS18470 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DYI28_RS18470 PF16355 Domain of unknown function (DUF4982) DYI28_RS18470 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYI28_RS18470 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS18475 PF07745 Glycosyl hydrolase family 53 DYI28_RS18485 PF07980 SusD family DYI28_RS18490 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS18490 PF00593 TonB dependent receptor DYI28_RS18495 PF13426 PAS domain DYI28_RS18495 PF08448 PAS fold DYI28_RS18495 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS18495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS18495 PF00072 Response regulator receiver domain DYI28_RS18500 PF13677 Membrane MotB of proton-channel complex MotA/MotB DYI28_RS18500 PF00691 OmpA family DYI28_RS18505 PF01725 Ham1 family DYI28_RS18510 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DYI28_RS18510 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DYI28_RS18515 PF09334 tRNA synthetases class I (M) DYI28_RS18515 PF13603 Leucyl-tRNA synthetase, Domain 2 DYI28_RS18515 PF08264 Anticodon-binding domain of tRNA DYI28_RS18525 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain DYI28_RS18525 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain DYI28_RS18525 PF08531 Alpha-L-rhamnosidase N-terminal domain DYI28_RS18525 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain DYI28_RS18540 PF00892 EamA-like transporter family DYI28_RS18545 PF00245 Alkaline phosphatase DYI28_RS18555 PF07971 Glycosyl hydrolase family 92 DYI28_RS18555 PF17678 Glycosyl hydrolase family 92 N-terminal domain DYI28_RS18565 PF01624 MutS domain I DYI28_RS18565 PF05190 MutS family domain IV DYI28_RS18565 PF00488 MutS domain V DYI28_RS18565 PF05188 MutS domain II DYI28_RS18565 PF05192 MutS domain III DYI28_RS18570 PF01790 Prolipoprotein diacylglyceryl transferase DYI28_RS18575 PF02558 Ketopantoate reductase PanE/ApbA DYI28_RS18575 PF08546 Ketopantoate reductase PanE/ApbA C terminal DYI28_RS18580 PF06071 Protein of unknown function (DUF933) DYI28_RS18580 PF01926 50S ribosome-binding GTPase DYI28_RS18600 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS18600 PF00593 TonB dependent receptor DYI28_RS18615 PF07690 Major Facilitator Superfamily DYI28_RS18630 PF00884 Sulfatase DYI28_RS18630 PF16385 Domain of unknown function DYI28_RS18655 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS18655 PF00593 TonB dependent receptor DYI28_RS18665 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS18665 PF00593 TonB dependent receptor DYI28_RS18685 PF00072 Response regulator receiver domain DYI28_RS18685 PF07495 Y_Y_Y domain DYI28_RS18685 PF12833 Helix-turn-helix domain DYI28_RS18685 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS18685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS18685 PF07494 Two component regulator propeller DYI28_RS18690 PF06964 Alpha-L-arabinofuranosidase C-terminal domain DYI28_RS18690 PF02018 Carbohydrate binding domain DYI28_RS18695 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain DYI28_RS18695 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain DYI28_RS18695 PF00884 Sulfatase DYI28_RS18695 PF16347 Domain of unknown function (DUF4976) DYI28_RS18695 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain DYI28_RS18705 PF00884 Sulfatase DYI28_RS18740 PF00593 TonB dependent receptor DYI28_RS18740 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS18745 PF07980 SusD family DYI28_RS18745 PF14322 Starch-binding associating with outer membrane DYI28_RS18755 PF13199 Glycosyl hydrolase family 66 DYI28_RS18755 PF03422 Carbohydrate binding module (family 6) DYI28_RS18755 PF16990 Carbohydrate binding module (family 35) DYI28_RS18760 PF13802 Galactose mutarotase-like DYI28_RS18760 PF17137 Domain of unknown function (DUF5110) DYI28_RS18760 PF16338 Domain of unknown function (DUF4968) DYI28_RS18760 PF01055 Glycosyl hydrolases family 31 DYI28_RS18765 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS18765 PF12833 Helix-turn-helix domain DYI28_RS18765 PF07495 Y_Y_Y domain DYI28_RS18765 PF00072 Response regulator receiver domain DYI28_RS18765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS18765 PF07494 Two component regulator propeller DYI28_RS18770 PF07470 Glycosyl Hydrolase Family 88 DYI28_RS18780 PF00593 TonB dependent receptor DYI28_RS18780 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS18785 PF14322 Starch-binding associating with outer membrane DYI28_RS18785 PF07980 SusD family DYI28_RS18790 PF05336 L-rhamnose mutarotase DYI28_RS18835 PF07883 Cupin domain DYI28_RS18840 PF00291 Pyridoxal-phosphate dependent enzyme DYI28_RS18845 PF00933 Glycosyl hydrolase family 3 N terminal domain DYI28_RS18845 PF14310 Fibronectin type III-like domain DYI28_RS18845 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYI28_RS18860 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS18860 PF00593 TonB dependent receptor DYI28_RS18870 PF13426 PAS domain DYI28_RS18870 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS18870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS18870 PF00672 HAMP domain DYI28_RS18880 PF00593 TonB dependent receptor DYI28_RS18880 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS18885 PF14322 Starch-binding associating with outer membrane DYI28_RS18885 PF07980 SusD family DYI28_RS18890 PF04616 Glycosyl hydrolases family 43 DYI28_RS18900 PF14310 Fibronectin type III-like domain DYI28_RS18900 PF00933 Glycosyl hydrolase family 3 N terminal domain DYI28_RS18900 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYI28_RS18905 PF13173 AAA domain DYI28_RS18905 PF13635 Domain of unknown function (DUF4143) DYI28_RS18910 PF12950 TaqI-like C-terminal specificity domain DYI28_RS18910 PF07669 Eco57I restriction-modification methylase DYI28_RS18925 PF00575 S1 RNA binding domain DYI28_RS18925 PF00773 RNB domain DYI28_RS18925 PF08206 Ribonuclease B OB domain DYI28_RS18925 PF17876 Cold shock domain DYI28_RS18975 PF01370 NAD dependent epimerase/dehydratase family DYI28_RS18985 PF01207 Dihydrouridine synthase (Dus) DYI28_RS18990 PF01136 Peptidase family U32 DYI28_RS19000 PF18255 DNA processing protein A sterile alpha motif domain DYI28_RS19000 PF02481 DNA recombination-mediator protein A DYI28_RS19005 PF18470 Cas9 alpha-helical lobe domain DYI28_RS19005 PF13395 HNH endonuclease DYI28_RS19005 PF18541 RuvC endonuclease subdomain 3 DYI28_RS19015 PF01867 CRISPR associated protein Cas1 DYI28_RS19020 PF09827 CRISPR associated protein Cas2 DYI28_RS19120 PF17145 Domain of unknown function (DUF5119) DYI28_RS19170 PF13085 2Fe-2S iron-sulfur cluster binding domain DYI28_RS19175 PF00890 FAD binding domain DYI28_RS19175 PF02910 Fumarate reductase flavoprotein C-term DYI28_RS19200 PF07494 Two component regulator propeller DYI28_RS19200 PF07495 Y_Y_Y domain DYI28_RS19200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS19200 PF00072 Response regulator receiver domain DYI28_RS19200 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS19200 PF12833 Helix-turn-helix domain DYI28_RS19210 PF00593 TonB dependent receptor DYI28_RS19210 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS19215 PF07980 SusD family DYI28_RS19215 PF14322 Starch-binding associating with outer membrane DYI28_RS19235 PF07495 Y_Y_Y domain DYI28_RS19235 PF00072 Response regulator receiver domain DYI28_RS19235 PF07494 Two component regulator propeller DYI28_RS19235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS19235 PF12833 Helix-turn-helix domain DYI28_RS19235 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS19240 PF00593 TonB dependent receptor DYI28_RS19240 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS19245 PF14322 Starch-binding associating with outer membrane DYI28_RS19245 PF07980 SusD family DYI28_RS19250 PF03781 Sulfatase-modifying factor enzyme 1 DYI28_RS19320 PF00216 Bacterial DNA-binding protein DYI28_RS19375 PF00005 ABC transporter DYI28_RS19380 PF01032 FecCD transport family DYI28_RS19410 PF13855 Leucine rich repeat DYI28_RS19410 PF12799 Leucine Rich repeats (2 copies) DYI28_RS19410 PF08191 LRR adjacent DYI28_RS19410 PF06458 MucBP domain DYI28_RS19460 PF05188 MutS domain II DYI28_RS19460 PF01624 MutS domain I DYI28_RS19460 PF05190 MutS family domain IV DYI28_RS19460 PF00488 MutS domain V DYI28_RS19460 PF05192 MutS domain III DYI28_RS19520 PF10145 Phage-related minor tail protein DYI28_RS19520 PF01551 Peptidase family M23 DYI28_RS19520 PF01464 Transglycosylase SLT domain DYI28_RS19555 PF13614 AAA domain DYI28_RS19570 PF02195 ParB-like nuclease domain DYI28_RS19570 PF17762 HTH domain found in ParB protein DYI28_RS19620 PF01555 DNA methylase DYI28_RS19655 PF00589 Phage integrase family DYI28_RS19655 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS19660 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS19660 PF00589 Phage integrase family DYI28_RS19715 PF00109 Beta-ketoacyl synthase, N-terminal domain DYI28_RS19715 PF00501 AMP-binding enzyme DYI28_RS19715 PF13193 AMP-binding enzyme C-terminal domain DYI28_RS19715 PF00668 Condensation domain DYI28_RS19715 PF16197 Ketoacyl-synthetase C-terminal extension DYI28_RS19715 PF02801 Beta-ketoacyl synthase, C-terminal domain DYI28_RS19715 PF08659 KR domain DYI28_RS19715 PF00550 Phosphopantetheine attachment site DYI28_RS19715 PF14765 Polyketide synthase dehydratase DYI28_RS19725 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS19725 PF00593 TonB dependent receptor DYI28_RS19755 PF01076 Plasmid recombination enzyme DYI28_RS19770 PF14659 Phage integrase, N-terminal SAM-like domain DYI28_RS19770 PF00589 Phage integrase family DYI28_RS19795 PF13649 Methyltransferase domain DYI28_RS19810 PF08021 Siderophore-interacting FAD-binding domain DYI28_RS19810 PF00664 ABC transporter transmembrane region DYI28_RS19810 PF04954 Siderophore-interacting protein DYI28_RS19810 PF00005 ABC transporter DYI28_RS19815 PF00664 ABC transporter transmembrane region DYI28_RS19815 PF00005 ABC transporter DYI28_RS19875 PF10502 Signal peptidase, peptidase S26 DYI28_RS19880 PF10502 Signal peptidase, peptidase S26 DYI28_RS19885 PF05173 Dihydrodipicolinate reductase, C-terminus DYI28_RS19885 PF01113 Dihydrodipicolinate reductase, N-terminus DYI28_RS19915 PF00535 Glycosyl transferase family 2 DYI28_RS19935 PF09092 Lyase, N terminal DYI28_RS19935 PF09093 Lyase, catalytic DYI28_RS19935 PF02278 Polysaccharide lyase family 8, super-sandwich domain DYI28_RS19945 PF13276 HTH-like domain DYI28_RS19945 PF13333 Integrase core domain DYI28_RS19945 PF00665 Integrase core domain DYI28_RS19960 PF01207 Dihydrouridine synthase (Dus) DYI28_RS19970 PF07980 SusD family DYI28_RS19970 PF14322 Starch-binding associating with outer membrane DYI28_RS19975 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS19975 PF00593 TonB dependent receptor DYI28_RS19980 PF16385 Domain of unknown function DYI28_RS19980 PF00884 Sulfatase DYI28_RS19985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS19985 PF07495 Y_Y_Y domain DYI28_RS19985 PF07495 Y_Y_Y domain DYI28_RS19985 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS19985 PF12833 Helix-turn-helix domain DYI28_RS19985 PF00072 Response regulator receiver domain DYI28_RS19985 PF07494 Two component regulator propeller DYI28_RS19985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS19985 PF00072 Response regulator receiver domain DYI28_RS19985 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS19985 PF07494 Two component regulator propeller DYI28_RS19985 PF12833 Helix-turn-helix domain DYI28_RS20000 PF07980 SusD family DYI28_RS20000 PF14322 Starch-binding associating with outer membrane DYI28_RS20005 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS20005 PF00593 TonB dependent receptor DYI28_RS20015 PF00593 TonB dependent receptor DYI28_RS20015 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS20035 PF07690 Major Facilitator Superfamily DYI28_RS20045 PF13580 SIS domain DYI28_RS20050 PF00480 ROK family DYI28_RS20055 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DYI28_RS20055 PF16355 Domain of unknown function (DUF4982) DYI28_RS20055 PF00703 Glycosyl hydrolases family 2 DYI28_RS20055 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS20055 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYI28_RS20065 PF00356 Bacterial regulatory proteins, lacI family DYI28_RS20075 PF00132 Bacterial transferase hexapeptide (six repeats) DYI28_RS20075 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DYI28_RS20080 PF02321 Outer membrane efflux protein DYI28_RS20085 PF00873 AcrB/AcrD/AcrF family DYI28_RS20090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYI28_RS20090 PF00529 HlyD membrane-fusion protein of T1SS DYI28_RS20095 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYI28_RS20095 PF02929 Beta galactosidase small chain DYI28_RS20095 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS20095 PF00703 Glycosyl hydrolases family 2 DYI28_RS20095 PF16353 Domain of unknown function(DUF4981) DYI28_RS20100 PF00593 TonB dependent receptor DYI28_RS20100 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS20115 PF14322 Starch-binding associating with outer membrane DYI28_RS20115 PF07980 SusD family DYI28_RS20150 PF07470 Glycosyl Hydrolase Family 88 DYI28_RS20155 PF00884 Sulfatase DYI28_RS20160 PF09092 Lyase, N terminal DYI28_RS20160 PF09093 Lyase, catalytic DYI28_RS20160 PF02278 Polysaccharide lyase family 8, super-sandwich domain DYI28_RS20165 PF09190 DALR domain DYI28_RS20165 PF01406 tRNA synthetases class I (C) catalytic domain DYI28_RS20190 PF04434 SWIM zinc finger DYI28_RS20190 PF00176 SNF2 family N-terminal domain DYI28_RS20190 PF00271 Helicase conserved C-terminal domain DYI28_RS20205 PF00365 Phosphofructokinase DYI28_RS20210 PF14622 Ribonuclease-III-like DYI28_RS20210 PF00035 Double-stranded RNA binding motif DYI28_RS20215 PF00109 Beta-ketoacyl synthase, N-terminal domain DYI28_RS20215 PF02801 Beta-ketoacyl synthase, C-terminal domain DYI28_RS20220 PF00550 Phosphopantetheine attachment site DYI28_RS20225 PF00551 Formyl transferase DYI28_RS20230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYI28_RS20230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYI28_RS20265 PF00534 Glycosyl transferases group 1 DYI28_RS20270 PF04991 LicD family DYI28_RS20275 PF12804 MobA-like NTP transferase domain DYI28_RS20280 PF00155 Aminotransferase class I and II DYI28_RS20285 PF00535 Glycosyl transferase family 2 DYI28_RS20290 PF00535 Glycosyl transferase family 2 DYI28_RS20290 PF01501 Glycosyl transferase family 8 DYI28_RS20310 PF00535 Glycosyl transferase family 2 DYI28_RS20315 PF00535 Glycosyl transferase family 2 DYI28_RS20315 PF01501 Glycosyl transferase family 8 DYI28_RS20340 PF09820 Predicted AAA-ATPase DYI28_RS20340 PF08011 PD-(D/E)XK nuclease superfamily DYI28_RS20360 PF00664 ABC transporter transmembrane region DYI28_RS20360 PF00005 ABC transporter DYI28_RS20365 PF01522 Polysaccharide deacetylase DYI28_RS20370 PF00535 Glycosyl transferase family 2 DYI28_RS20380 PF00884 Sulfatase DYI28_RS20390 PF01693 Caulimovirus viroplasmin DYI28_RS20400 PF01202 Shikimate kinase DYI28_RS20410 PF00183 Hsp90 protein DYI28_RS20420 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DYI28_RS20420 PF17944 Arginine decarboxylase C-terminal helical extension DYI28_RS20420 PF17810 Arginine decarboxylase helical bundle domain DYI28_RS20425 PF00696 Amino acid kinase family DYI28_RS20430 PF08281 Sigma-70, region 4 DYI28_RS20430 PF04542 Sigma-70 region 2 DYI28_RS20455 PF17384 RimP C-terminal SH3 domain DYI28_RS20455 PF02576 RimP N-terminal domain DYI28_RS20460 PF13184 NusA-like KH domain DYI28_RS20460 PF08529 NusA N-terminal domain DYI28_RS20460 PF00575 S1 RNA binding domain DYI28_RS20465 PF11987 Translation-initiation factor 2 DYI28_RS20465 PF04760 Translation initiation factor IF-2, N-terminal region DYI28_RS20465 PF00009 Elongation factor Tu GTP binding domain DYI28_RS20475 PF01458 Uncharacterized protein family (UPF0051) DYI28_RS20480 PF00005 ABC transporter DYI28_RS20485 PF01458 Uncharacterized protein family (UPF0051) DYI28_RS20490 PF00266 Aminotransferase class-V DYI28_RS20495 PF16875 Glycosyl hydrolase family 36 N-terminal domain DYI28_RS20495 PF16874 Glycosyl hydrolase family 36 C-terminal domain DYI28_RS20505 PF12833 Helix-turn-helix domain DYI28_RS20505 PF12833 Helix-turn-helix domain DYI28_RS20505 PF07494 Two component regulator propeller DYI28_RS20505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS20505 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS20505 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS20505 PF12833 Helix-turn-helix domain DYI28_RS20505 PF07494 Two component regulator propeller DYI28_RS20505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS20505 PF07495 Y_Y_Y domain DYI28_RS20505 PF00072 Response regulator receiver domain DYI28_RS20505 PF07494 Two component regulator propeller DYI28_RS20505 PF00072 Response regulator receiver domain DYI28_RS20505 PF07495 Y_Y_Y domain DYI28_RS20505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS20505 PF00072 Response regulator receiver domain DYI28_RS20505 PF07495 Y_Y_Y domain DYI28_RS20505 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS20510 PF03030 Inorganic H+ pyrophosphatase DYI28_RS20515 PF01351 Ribonuclease HII DYI28_RS20535 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DYI28_RS20535 PF01676 Metalloenzyme superfamily DYI28_RS20555 PF00986 DNA gyrase B subunit, carboxyl terminus DYI28_RS20555 PF00204 DNA gyrase B DYI28_RS20555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS20555 PF01751 Toprim domain DYI28_RS20560 PF01649 Ribosomal protein S20 DYI28_RS20610 PF11967 Recombination protein O N terminal DYI28_RS20610 PF02565 Recombination protein O C terminal DYI28_RS20665 PF00091 Tubulin/FtsZ family, GTPase domain DYI28_RS20665 PF12327 FtsZ family, C-terminal domain DYI28_RS20670 PF02491 SHS2 domain inserted in FTSA DYI28_RS20680 PF08245 Mur ligase middle domain DYI28_RS20680 PF01225 Mur ligase family, catalytic domain DYI28_RS20680 PF02875 Mur ligase family, glutamate ligase domain DYI28_RS20685 PF04101 Glycosyltransferase family 28 C-terminal domain DYI28_RS20685 PF03033 Glycosyltransferase family 28 N-terminal domain DYI28_RS20690 PF01098 Cell cycle protein DYI28_RS20695 PF08245 Mur ligase middle domain DYI28_RS20695 PF02875 Mur ligase family, glutamate ligase domain DYI28_RS20700 PF00953 Glycosyl transferase family 4 DYI28_RS20705 PF08245 Mur ligase middle domain DYI28_RS20705 PF02875 Mur ligase family, glutamate ligase domain DYI28_RS20705 PF01225 Mur ligase family, catalytic domain DYI28_RS20710 PF00905 Penicillin binding protein transpeptidase domain DYI28_RS20710 PF03717 Penicillin-binding Protein dimerisation domain DYI28_RS20720 PF01795 MraW methylase family DYI28_RS20725 PF02381 MraZ protein, putative antitoxin-like DYI28_RS20730 PF04542 Sigma-70 region 2 DYI28_RS20730 PF08281 Sigma-70, region 4 DYI28_RS20745 PF13286 Phosphohydrolase-associated domain DYI28_RS20745 PF01966 HD domain DYI28_RS20750 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS20750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS20750 PF07495 Y_Y_Y domain DYI28_RS20750 PF12833 Helix-turn-helix domain DYI28_RS20750 PF12833 Helix-turn-helix domain DYI28_RS20750 PF00072 Response regulator receiver domain DYI28_RS20750 PF00072 Response regulator receiver domain DYI28_RS20750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS20750 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS20750 PF07494 Two component regulator propeller DYI28_RS20750 PF07494 Two component regulator propeller DYI28_RS20750 PF07495 Y_Y_Y domain DYI28_RS20755 PF04616 Glycosyl hydrolases family 43 DYI28_RS20755 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain DYI28_RS20765 PF00593 TonB dependent receptor DYI28_RS20765 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS20790 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYI28_RS20790 PF14310 Fibronectin type III-like domain DYI28_RS20790 PF00933 Glycosyl hydrolase family 3 N terminal domain DYI28_RS20795 PF00692 dUTPase DYI28_RS20810 PF01551 Peptidase family M23 DYI28_RS20815 PF07494 Two component regulator propeller DYI28_RS20815 PF07495 Y_Y_Y domain DYI28_RS20815 PF12833 Helix-turn-helix domain DYI28_RS20815 PF00072 Response regulator receiver domain DYI28_RS20815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS20815 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS20820 PF00884 Sulfatase DYI28_RS20825 PF00884 Sulfatase DYI28_RS20825 PF16385 Domain of unknown function DYI28_RS20840 PF00593 TonB dependent receptor DYI28_RS20840 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS20850 PF00593 TonB dependent receptor DYI28_RS20850 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS20870 PF14322 Starch-binding associating with outer membrane DYI28_RS20870 PF07980 SusD family DYI28_RS20875 PF00593 TonB dependent receptor DYI28_RS20875 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS20905 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS20905 PF00593 TonB dependent receptor DYI28_RS20910 PF14322 Starch-binding associating with outer membrane DYI28_RS20910 PF07980 SusD family DYI28_RS20920 PF16385 Domain of unknown function DYI28_RS20920 PF00884 Sulfatase DYI28_RS20925 PF00884 Sulfatase DYI28_RS20935 PF00884 Sulfatase DYI28_RS20940 PF00884 Sulfatase DYI28_RS20945 PF00884 Sulfatase DYI28_RS20950 PF00884 Sulfatase DYI28_RS20960 PF00884 Sulfatase DYI28_RS20960 PF16385 Domain of unknown function DYI28_RS20965 PF00703 Glycosyl hydrolases family 2 DYI28_RS20965 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYI28_RS20965 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS20970 PF04616 Glycosyl hydrolases family 43 DYI28_RS20975 PF04616 Glycosyl hydrolases family 43 DYI28_RS20990 PF00593 TonB dependent receptor DYI28_RS20990 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS20995 PF14322 Starch-binding associating with outer membrane DYI28_RS20995 PF07980 SusD family DYI28_RS21035 PF01263 Aldose 1-epimerase DYI28_RS21160 PF00578 AhpC/TSA family DYI28_RS21165 PF07687 Peptidase dimerisation domain DYI28_RS21165 PF01546 Peptidase family M20/M25/M40 DYI28_RS21170 PF00501 AMP-binding enzyme DYI28_RS21175 PF00675 Insulinase (Peptidase family M16) DYI28_RS21175 PF05193 Peptidase M16 inactive domain DYI28_RS21180 PF00472 RF-1 domain DYI28_RS21180 PF03462 PCRF domain DYI28_RS21190 PF01928 CYTH domain DYI28_RS21200 PF13173 AAA domain DYI28_RS21200 PF13635 Domain of unknown function (DUF4143) DYI28_RS21375 PF00574 Clp protease DYI28_RS21470 PF09820 Predicted AAA-ATPase DYI28_RS21470 PF08011 PD-(D/E)XK nuclease superfamily DYI28_RS21495 PF00933 Glycosyl hydrolase family 3 N terminal domain DYI28_RS21495 PF14310 Fibronectin type III-like domain DYI28_RS21495 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYI28_RS21500 PF14322 Starch-binding associating with outer membrane DYI28_RS21500 PF07980 SusD family DYI28_RS21505 PF00593 TonB dependent receptor DYI28_RS21505 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS21530 PF00521 DNA gyrase/topoisomerase IV, subunit A DYI28_RS21535 PF10518 TAT (twin-arginine translocation) pathway signal sequence DYI28_RS21535 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYI28_RS21545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYI28_RS21565 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DYI28_RS21570 PF01979 Amidohydrolase family DYI28_RS21575 PF07690 Major Facilitator Superfamily DYI28_RS21580 PF14310 Fibronectin type III-like domain DYI28_RS21580 PF00933 Glycosyl hydrolase family 3 N terminal domain DYI28_RS21580 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYI28_RS21600 PF00593 TonB dependent receptor DYI28_RS21600 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS21610 PF12833 Helix-turn-helix domain DYI28_RS21620 PF13635 Domain of unknown function (DUF4143) DYI28_RS21620 PF13173 AAA domain DYI28_RS21625 PF03129 Anticodon binding domain DYI28_RS21635 PF00356 Bacterial regulatory proteins, lacI family DYI28_RS21640 PF00248 Aldo/keto reductase family DYI28_RS21650 PF07690 Major Facilitator Superfamily DYI28_RS21655 PF08240 Alcohol dehydrogenase GroES-like domain DYI28_RS21655 PF00107 Zinc-binding dehydrogenase DYI28_RS21660 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DYI28_RS21660 PF04616 Glycosyl hydrolases family 43 DYI28_RS21665 PF07691 PA14 domain DYI28_RS21665 PF14310 Fibronectin type III-like domain DYI28_RS21665 PF00933 Glycosyl hydrolase family 3 N terminal domain DYI28_RS21665 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYI28_RS21670 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DYI28_RS21670 PF04616 Glycosyl hydrolases family 43 DYI28_RS21675 PF16338 Domain of unknown function (DUF4968) DYI28_RS21675 PF17137 Domain of unknown function (DUF5110) DYI28_RS21675 PF01055 Glycosyl hydrolases family 31 DYI28_RS21690 PF17137 Domain of unknown function (DUF5110) DYI28_RS21690 PF16338 Domain of unknown function (DUF4968) DYI28_RS21690 PF01055 Glycosyl hydrolases family 31 DYI28_RS21695 PF04616 Glycosyl hydrolases family 43 DYI28_RS21695 PF03422 Carbohydrate binding module (family 6) DYI28_RS21700 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DYI28_RS21700 PF04616 Glycosyl hydrolases family 43 DYI28_RS21705 PF00593 TonB dependent receptor DYI28_RS21705 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS21720 PF14322 Starch-binding associating with outer membrane DYI28_RS21720 PF07980 SusD family DYI28_RS21745 PF00756 Putative esterase DYI28_RS21745 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase DYI28_RS21750 PF04616 Glycosyl hydrolases family 43 DYI28_RS21750 PF03422 Carbohydrate binding module (family 6) DYI28_RS21755 PF07494 Two component regulator propeller DYI28_RS21755 PF12833 Helix-turn-helix domain DYI28_RS21755 PF07495 Y_Y_Y domain DYI28_RS21755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS21755 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS21755 PF00072 Response regulator receiver domain DYI28_RS21770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS21770 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS21770 PF00072 Response regulator receiver domain DYI28_RS21770 PF12833 Helix-turn-helix domain DYI28_RS21770 PF07495 Y_Y_Y domain DYI28_RS21770 PF07494 Two component regulator propeller DYI28_RS21770 PF00072 Response regulator receiver domain DYI28_RS21770 PF07495 Y_Y_Y domain DYI28_RS21770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS21770 PF07494 Two component regulator propeller DYI28_RS21770 PF12833 Helix-turn-helix domain DYI28_RS21770 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS21780 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS21780 PF00593 TonB dependent receptor DYI28_RS21785 PF14322 Starch-binding associating with outer membrane DYI28_RS21785 PF07980 SusD family DYI28_RS21815 PF01380 SIS domain DYI28_RS21830 PF07690 Major Facilitator Superfamily DYI28_RS21840 PF00535 Glycosyl transferase family 2 DYI28_RS21845 PF00474 Sodium:solute symporter family DYI28_RS21865 PF00005 ABC transporter DYI28_RS21900 PF01118 Semialdehyde dehydrogenase, NAD binding domain DYI28_RS21900 PF02774 Semialdehyde dehydrogenase, dimerisation domain DYI28_RS21905 PF00582 Universal stress protein family DYI28_RS21905 PF00999 Sodium/hydrogen exchanger family DYI28_RS21910 PF00899 ThiF family DYI28_RS21915 PF00005 ABC transporter DYI28_RS21925 PF00209 Sodium:neurotransmitter symporter family DYI28_RS21935 PF01225 Mur ligase family, catalytic domain DYI28_RS21935 PF02875 Mur ligase family, glutamate ligase domain DYI28_RS21935 PF08245 Mur ligase middle domain DYI28_RS21940 PF00072 Response regulator receiver domain DYI28_RS21940 PF09308 LuxQ, periplasmic DYI28_RS21940 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS21940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS21945 PF00809 Pterin binding enzyme DYI28_RS21950 PF02457 DisA bacterial checkpoint controller nucleotide-binding DYI28_RS21955 PF01301 Glycosyl hydrolases family 35 DYI28_RS21965 PF02018 Carbohydrate binding domain DYI28_RS21965 PF06964 Alpha-L-arabinofuranosidase C-terminal domain DYI28_RS21970 PF10566 Glycoside hydrolase 97 DYI28_RS21970 PF14508 Glycosyl-hydrolase 97 N-terminal DYI28_RS21970 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation DYI28_RS22000 PF01055 Glycosyl hydrolases family 31 DYI28_RS22000 PF16338 Domain of unknown function (DUF4968) DYI28_RS22000 PF17137 Domain of unknown function (DUF5110) DYI28_RS22005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS22005 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS22005 PF12833 Helix-turn-helix domain DYI28_RS22005 PF07494 Two component regulator propeller DYI28_RS22005 PF00072 Response regulator receiver domain DYI28_RS22005 PF07495 Y_Y_Y domain DYI28_RS22045 PF04172 LrgB-like family DYI28_RS22050 PF03788 LrgA family DYI28_RS22055 PF01515 Phosphate acetyl/butaryl transferase DYI28_RS22060 PF00871 Acetokinase family DYI28_RS22065 PF00535 Glycosyl transferase family 2 DYI28_RS22070 PF00728 Glycosyl hydrolase family 20, catalytic domain DYI28_RS22070 PF02838 Glycosyl hydrolase family 20, domain 2 DYI28_RS22075 PF04002 RadC-like JAB domain DYI28_RS22080 PF07495 Y_Y_Y domain DYI28_RS22080 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS22080 PF00072 Response regulator receiver domain DYI28_RS22080 PF07494 Two component regulator propeller DYI28_RS22080 PF12833 Helix-turn-helix domain DYI28_RS22080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS22115 PF16355 Domain of unknown function (DUF4982) DYI28_RS22115 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DYI28_RS22115 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYI28_RS22115 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS22115 PF00703 Glycosyl hydrolases family 2 DYI28_RS22120 PF01883 Iron-sulfur cluster assembly protein DYI28_RS22125 PF12850 Calcineurin-like phosphoesterase superfamily domain DYI28_RS22130 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYI28_RS22130 PF02806 Alpha amylase, C-terminal all-beta domain DYI28_RS22130 PF00128 Alpha amylase, catalytic domain DYI28_RS22135 PF16411 Outer membrane protein SusF_SusE DYI28_RS22135 PF17142 Domain of unknown function (DUF5115) DYI28_RS22140 PF16411 Outer membrane protein SusF_SusE DYI28_RS22140 PF14292 SusE outer membrane protein DYI28_RS22145 PF07980 SusD family DYI28_RS22150 PF00593 TonB dependent receptor DYI28_RS22150 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS22155 PF14508 Glycosyl-hydrolase 97 N-terminal DYI28_RS22155 PF10566 Glycoside hydrolase 97 DYI28_RS22155 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation DYI28_RS22160 PF00128 Alpha amylase, catalytic domain DYI28_RS22160 PF10438 Cyclo-malto-dextrinase C-terminal domain DYI28_RS22160 PF09087 Cyclomaltodextrinase, N-terminal DYI28_RS22170 PF00245 Alkaline phosphatase DYI28_RS22175 PF01132 Elongation factor P (EF-P) OB domain DYI28_RS22175 PF08207 Elongation factor P (EF-P) KOW-like domain DYI28_RS22175 PF09285 Elongation factor P, C-terminal DYI28_RS22180 PF00468 Ribosomal protein L34 DYI28_RS22185 PF00069 Protein kinase domain DYI28_RS22185 PF03793 PASTA domain DYI28_RS22190 PF00849 RNA pseudouridylate synthase DYI28_RS22190 PF01479 S4 domain DYI28_RS22195 PF07478 D-ala D-ala ligase C-terminus DYI28_RS22195 PF01820 D-ala D-ala ligase N-terminus DYI28_RS22215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DYI28_RS22215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DYI28_RS22235 PF01472 PUA domain DYI28_RS22235 PF00696 Amino acid kinase family DYI28_RS22240 PF00155 Aminotransferase class I and II DYI28_RS22250 PF00589 Phage integrase family DYI28_RS22250 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS22255 PF00589 Phage integrase family DYI28_RS22255 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS22390 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DYI28_RS22390 PF01348 Type II intron maturase DYI28_RS22540 PF00589 Phage integrase family DYI28_RS22540 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS22555 PF01751 Toprim domain DYI28_RS22555 PF01131 DNA topoisomerase DYI28_RS22570 PF06250 YhcG PDDEXK nuclease domain DYI28_RS22570 PF17761 DUF1016 N-terminal domain DYI28_RS22600 PF01177 Asp/Glu/Hydantoin racemase DYI28_RS22615 PF07244 Surface antigen variable number repeat DYI28_RS22615 PF01103 Surface antigen DYI28_RS22620 PF01255 Putative undecaprenyl diphosphate synthase DYI28_RS22630 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DYI28_RS22630 PF01872 RibD C-terminal domain DYI28_RS22635 PF05175 Methyltransferase small domain DYI28_RS22635 PF17827 PrmC N-terminal domain DYI28_RS22645 PF00156 Phosphoribosyl transferase domain DYI28_RS22655 PF00206 Lyase DYI28_RS22715 PF00589 Phage integrase family DYI28_RS22730 PF03717 Penicillin-binding Protein dimerisation domain DYI28_RS22730 PF05223 NTF2-like N-terminal transpeptidase domain DYI28_RS22730 PF00905 Penicillin binding protein transpeptidase domain DYI28_RS22795 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS22795 PF00593 TonB dependent receptor DYI28_RS22825 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS22825 PF12833 Helix-turn-helix domain DYI28_RS22825 PF07494 Two component regulator propeller DYI28_RS22825 PF00072 Response regulator receiver domain DYI28_RS22825 PF07495 Y_Y_Y domain DYI28_RS22825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS22835 PF08281 Sigma-70, region 4 DYI28_RS22835 PF04542 Sigma-70 region 2 DYI28_RS22840 PF00593 TonB dependent receptor DYI28_RS22840 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS22860 PF05448 Acetyl xylan esterase (AXE1) DYI28_RS22870 PF13808 DDE_Tnp_1-associated DYI28_RS22870 PF01609 Transposase DDE domain DYI28_RS22905 PF00593 TonB dependent receptor DYI28_RS22905 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS22920 PF01095 Pectinesterase DYI28_RS22925 PF00072 Response regulator receiver domain DYI28_RS22925 PF07494 Two component regulator propeller DYI28_RS22925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS22925 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS22925 PF07495 Y_Y_Y domain DYI28_RS22925 PF12833 Helix-turn-helix domain DYI28_RS22930 PF00295 Glycosyl hydrolases family 28 DYI28_RS22935 PF13193 AMP-binding enzyme C-terminal domain DYI28_RS22935 PF00501 AMP-binding enzyme DYI28_RS22940 PF01381 Helix-turn-helix DYI28_RS22940 PF07883 Cupin domain DYI28_RS22950 PF00202 Aminotransferase class-III DYI28_RS22955 PF02774 Semialdehyde dehydrogenase, dimerisation domain DYI28_RS22955 PF01118 Semialdehyde dehydrogenase, NAD binding domain DYI28_RS22960 PF00764 Arginosuccinate synthase DYI28_RS22970 PF02863 Arginine repressor, C-terminal domain DYI28_RS22970 PF01316 Arginine repressor, DNA binding domain DYI28_RS22980 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DYI28_RS22980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DYI28_RS22985 PF06134 L-rhamnose isomerase (RhaA) DYI28_RS22990 PF06379 L-rhamnose-proton symport protein (RhaT) DYI28_RS22995 PF00596 Class II Aldolase and Adducin N-terminal domain DYI28_RS23000 PF00465 Iron-containing alcohol dehydrogenase DYI28_RS23005 PF12833 Helix-turn-helix domain DYI28_RS23010 PF12833 Helix-turn-helix domain DYI28_RS23010 PF07495 Y_Y_Y domain DYI28_RS23010 PF00072 Response regulator receiver domain DYI28_RS23010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS23010 PF07494 Two component regulator propeller DYI28_RS23010 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS23015 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS23015 PF00593 TonB dependent receptor DYI28_RS23020 PF14322 Starch-binding associating with outer membrane DYI28_RS23020 PF07980 SusD family DYI28_RS23050 PF16338 Domain of unknown function (DUF4968) DYI28_RS23050 PF17137 Domain of unknown function (DUF5110) DYI28_RS23050 PF01055 Glycosyl hydrolases family 31 DYI28_RS23055 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYI28_RS23055 PF16355 Domain of unknown function (DUF4982) DYI28_RS23055 PF00703 Glycosyl hydrolases family 2 DYI28_RS23055 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS23070 PF00440 Bacterial regulatory proteins, tetR family DYI28_RS23070 PF08360 QacR-like protein, C-terminal region DYI28_RS23080 PF01479 S4 domain DYI28_RS23080 PF00849 RNA pseudouridylate synthase DYI28_RS23110 PF07971 Glycosyl hydrolase family 92 DYI28_RS23110 PF17678 Glycosyl hydrolase family 92 N-terminal domain DYI28_RS23120 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS23120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS23120 PF07495 Y_Y_Y domain DYI28_RS23120 PF00072 Response regulator receiver domain DYI28_RS23120 PF07494 Two component regulator propeller DYI28_RS23120 PF12833 Helix-turn-helix domain DYI28_RS23140 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS23140 PF00593 TonB dependent receptor DYI28_RS23160 PF16347 Domain of unknown function (DUF4976) DYI28_RS23160 PF00884 Sulfatase DYI28_RS23165 PF02954 Bacterial regulatory protein, Fis family DYI28_RS23165 PF00072 Response regulator receiver domain DYI28_RS23165 PF00158 Sigma-54 interaction domain DYI28_RS23170 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DYI28_RS23170 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DYI28_RS23175 PF05193 Peptidase M16 inactive domain DYI28_RS23175 PF00675 Insulinase (Peptidase family M16) DYI28_RS23180 PF01554 MatE DYI28_RS23185 PF00989 PAS fold DYI28_RS23185 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYI28_RS23185 PF01627 Hpt domain DYI28_RS23185 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS23185 PF00072 Response regulator receiver domain DYI28_RS23185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS23200 PF00593 TonB dependent receptor DYI28_RS23200 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS23215 PF05193 Peptidase M16 inactive domain DYI28_RS23215 PF00675 Insulinase (Peptidase family M16) DYI28_RS23245 PF12848 ABC transporter DYI28_RS23245 PF00005 ABC transporter DYI28_RS23245 PF16326 ABC transporter C-terminal domain DYI28_RS23250 PF05649 Peptidase family M13 DYI28_RS23250 PF01431 Peptidase family M13 DYI28_RS23255 PF02142 MGS-like domain DYI28_RS23255 PF01808 AICARFT/IMPCHase bienzyme DYI28_RS23275 PF00905 Penicillin binding protein transpeptidase domain DYI28_RS23275 PF03717 Penicillin-binding Protein dimerisation domain DYI28_RS23280 PF01098 Cell cycle protein DYI28_RS23290 PF04468 PSP1 C-terminal conserved region DYI28_RS23295 PF09115 DNA polymerase III, delta subunit, C terminal DYI28_RS23300 PF02219 Methylenetetrahydrofolate reductase DYI28_RS23305 PF00210 Ferritin-like domain DYI28_RS23350 PF01783 Ribosomal L32p protein family DYI28_RS23355 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DYI28_RS23355 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DYI28_RS23360 PF01926 50S ribosome-binding GTPase DYI28_RS23360 PF07650 KH domain DYI28_RS23365 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DYI28_RS23365 PF01926 50S ribosome-binding GTPase DYI28_RS23370 PF00005 ABC transporter DYI28_RS23375 PF02405 Permease MlaE DYI28_RS23380 PF00005 ABC transporter DYI28_RS23385 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DYI28_RS23390 PF05698 Bacterial trigger factor protein (TF) C-terminus DYI28_RS23390 PF05697 Bacterial trigger factor protein (TF) DYI28_RS23390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYI28_RS23395 PF00574 Clp protease DYI28_RS23400 PF07724 AAA domain (Cdc48 subfamily) DYI28_RS23400 PF06689 ClpX C4-type zinc finger DYI28_RS23400 PF10431 C-terminal, D2-small domain, of ClpB protein DYI28_RS23405 PF16124 RecQ zinc-binding DYI28_RS23405 PF00270 DEAD/DEAH box helicase DYI28_RS23405 PF00271 Helicase conserved C-terminal domain DYI28_RS23405 PF09382 RQC domain DYI28_RS23405 PF00570 HRDC domain DYI28_RS23410 PF00478 IMP dehydrogenase / GMP reductase domain DYI28_RS23410 PF00571 CBS domain DYI28_RS23425 PF00639 PPIC-type PPIASE domain DYI28_RS23425 PF09312 SurA N-terminal domain DYI28_RS23440 PF01119 DNA mismatch repair protein, C-terminal domain DYI28_RS23440 PF08676 MutL C terminal dimerisation domain DYI28_RS23470 PF00579 tRNA synthetases class I (W and Y) DYI28_RS23480 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DYI28_RS23480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DYI28_RS23480 PF02142 MGS-like domain DYI28_RS23520 PF03883 Peroxide stress protein YaaA DYI28_RS23525 PF14602 Hexapeptide repeat of succinyl-transferase DYI28_RS23525 PF12464 Maltose acetyltransferase DYI28_RS23540 PF08328 Adenylosuccinate lyase C-terminal DYI28_RS23540 PF00206 Lyase DYI28_RS23545 PF01479 S4 domain DYI28_RS23545 PF00849 RNA pseudouridylate synthase DYI28_RS23550 PF00152 tRNA synthetases class II (D, K and N) DYI28_RS23550 PF01336 OB-fold nucleic acid binding domain DYI28_RS23560 PF07470 Glycosyl Hydrolase Family 88 DYI28_RS23565 PF07494 Two component regulator propeller DYI28_RS23565 PF00072 Response regulator receiver domain DYI28_RS23565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS23565 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS23565 PF12833 Helix-turn-helix domain DYI28_RS23565 PF07495 Y_Y_Y domain DYI28_RS23600 PF00593 TonB dependent receptor DYI28_RS23600 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS23605 PF14322 Starch-binding associating with outer membrane DYI28_RS23605 PF07980 SusD family DYI28_RS23610 PF00572 Ribosomal protein L13 DYI28_RS23615 PF00380 Ribosomal protein S9/S16 DYI28_RS23620 PF00318 Ribosomal protein S2 DYI28_RS23625 PF00889 Elongation factor TS DYI28_RS23630 PF08534 Redoxin DYI28_RS23640 PF02629 CoA binding domain DYI28_RS23640 PF06971 Putative DNA-binding protein N-terminus DYI28_RS23645 PF01557 Fumarylacetoacetate (FAA) hydrolase family DYI28_RS23650 PF02542 YgbB family DYI28_RS23675 PF02601 Exonuclease VII, large subunit DYI28_RS23675 PF13742 OB-fold nucleic acid binding domain DYI28_RS23685 PF01063 Amino-transferase class IV DYI28_RS23695 PF02390 Putative methyltransferase DYI28_RS23700 PF10609 NUBPL iron-transfer P-loop NTPase DYI28_RS23700 PF01883 Iron-sulfur cluster assembly protein DYI28_RS23705 PF08534 Redoxin DYI28_RS23745 PF00056 lactate/malate dehydrogenase, NAD binding domain DYI28_RS23745 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DYI28_RS23760 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS23760 PF00593 TonB dependent receptor DYI28_RS23795 PF01513 ATP-NAD kinase DYI28_RS23800 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DYI28_RS23805 PF01618 MotA/TolQ/ExbB proton channel family DYI28_RS23810 PF02472 Biopolymer transport protein ExbD/TolR DYI28_RS23820 PF01965 DJ-1/PfpI family DYI28_RS23825 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DYI28_RS23830 PF17191 RecG wedge domain DYI28_RS23830 PF00270 DEAD/DEAH box helicase DYI28_RS23830 PF00271 Helicase conserved C-terminal domain DYI28_RS23835 PF00334 Nucleoside diphosphate kinase DYI28_RS23840 PF04225 Opacity-associated protein A LysM-like domain DYI28_RS23840 PF01551 Peptidase family M23 DYI28_RS23855 PF00121 Triosephosphate isomerase DYI28_RS23865 PF01227 GTP cyclohydrolase I DYI28_RS23870 PF08275 DNA primase catalytic core, N-terminal domain DYI28_RS23870 PF01807 CHC2 zinc finger DYI28_RS23870 PF10410 DnaB-helicase binding domain of primase DYI28_RS23880 PF18152 DAHP synthase ferredoxin-like domain DYI28_RS23880 PF00793 DAHP synthetase I family DYI28_RS23885 PF00155 Aminotransferase class I and II DYI28_RS23900 PF16124 RecQ zinc-binding DYI28_RS23900 PF09382 RQC domain DYI28_RS23900 PF00271 Helicase conserved C-terminal domain DYI28_RS23900 PF00270 DEAD/DEAH box helicase DYI28_RS23900 PF00570 HRDC domain DYI28_RS23905 PF01368 DHH family DYI28_RS23905 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DYI28_RS23905 PF17768 RecJ OB domain DYI28_RS23905 PF02272 DHHA1 domain DYI28_RS23960 PF00535 Glycosyl transferase family 2 DYI28_RS23965 PF07977 FabA-like domain DYI28_RS23980 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DYI28_RS23980 PF01522 Polysaccharide deacetylase DYI28_RS23990 PF00109 Beta-ketoacyl synthase, N-terminal domain DYI28_RS23990 PF02801 Beta-ketoacyl synthase, C-terminal domain DYI28_RS23995 PF00550 Phosphopantetheine attachment site DYI28_RS24000 PF02801 Beta-ketoacyl synthase, C-terminal domain DYI28_RS24000 PF00109 Beta-ketoacyl synthase, N-terminal domain DYI28_RS24025 PF00550 Phosphopantetheine attachment site DYI28_RS24030 PF00109 Beta-ketoacyl synthase, N-terminal domain DYI28_RS24030 PF02801 Beta-ketoacyl synthase, C-terminal domain DYI28_RS24040 PF00221 Aromatic amino acid lyase DYI28_RS24055 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS24055 PF00593 TonB dependent receptor DYI28_RS24065 PF01300 Telomere recombination DYI28_RS24075 PF00551 Formyl transferase DYI28_RS24075 PF02911 Formyl transferase, C-terminal domain DYI28_RS24080 PF00834 Ribulose-phosphate 3 epimerase family DYI28_RS24085 PF00753 Metallo-beta-lactamase superfamily DYI28_RS24085 PF13567 Domain of unknown function (DUF4131) DYI28_RS24085 PF03772 Competence protein DYI28_RS24090 PF01368 DHH family DYI28_RS24090 PF02272 DHHA1 domain DYI28_RS24100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DYI28_RS24100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYI28_RS24100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYI28_RS24100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYI28_RS24105 PF12852 Cupin DYI28_RS24105 PF12833 Helix-turn-helix domain DYI28_RS24110 PF16338 Domain of unknown function (DUF4968) DYI28_RS24110 PF13802 Galactose mutarotase-like DYI28_RS24110 PF01055 Glycosyl hydrolases family 31 DYI28_RS24110 PF17137 Domain of unknown function (DUF5110) DYI28_RS24125 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS24125 PF00593 TonB dependent receptor DYI28_RS24145 PF17137 Domain of unknown function (DUF5110) DYI28_RS24145 PF16338 Domain of unknown function (DUF4968) DYI28_RS24145 PF01055 Glycosyl hydrolases family 31 DYI28_RS24150 PF17678 Glycosyl hydrolase family 92 N-terminal domain DYI28_RS24150 PF07971 Glycosyl hydrolase family 92 DYI28_RS24165 PF17678 Glycosyl hydrolase family 92 N-terminal domain DYI28_RS24165 PF07971 Glycosyl hydrolase family 92 DYI28_RS24170 PF10566 Glycoside hydrolase 97 DYI28_RS24170 PF14508 Glycosyl-hydrolase 97 N-terminal DYI28_RS24170 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation DYI28_RS24175 PF00072 Response regulator receiver domain DYI28_RS24175 PF04397 LytTr DNA-binding domain DYI28_RS24180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS24180 PF13492 GAF domain DYI28_RS24180 PF07694 5TMR of 5TMR-LYT DYI28_RS24180 PF06580 Histidine kinase DYI28_RS24190 PF00873 AcrB/AcrD/AcrF family DYI28_RS24195 PF00255 Glutathione peroxidase DYI28_RS24200 PF00293 NUDIX domain DYI28_RS24205 PF02547 Queuosine biosynthesis protein DYI28_RS24265 PF04607 Region found in RelA / SpoT proteins DYI28_RS24265 PF13291 ACT domain DYI28_RS24265 PF02824 TGS domain DYI28_RS24275 PF01761 3-dehydroquinate synthase DYI28_RS24290 PF13091 PLD-like domain DYI28_RS24290 PF13396 Phospholipase_D-nuclease N-terminal DYI28_RS24310 PF14490 Helix-hairpin-helix containing domain DYI28_RS24310 PF13538 UvrD-like helicase C-terminal domain DYI28_RS24310 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DYI28_RS24320 PF00704 Glycosyl hydrolases family 18 DYI28_RS24340 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS24340 PF00593 TonB dependent receptor DYI28_RS24355 PF00704 Glycosyl hydrolases family 18 DYI28_RS24370 PF17678 Glycosyl hydrolase family 92 N-terminal domain DYI28_RS24370 PF07971 Glycosyl hydrolase family 92 DYI28_RS24375 PF07971 Glycosyl hydrolase family 92 DYI28_RS24375 PF17678 Glycosyl hydrolase family 92 N-terminal domain DYI28_RS24395 PF01411 tRNA synthetases class II (A) DYI28_RS24395 PF02272 DHHA1 domain DYI28_RS24395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DYI28_RS24400 PF01551 Peptidase family M23 DYI28_RS24400 PF01476 LysM domain DYI28_RS24400 PF08525 Opacity-associated protein A N-terminal motif DYI28_RS24410 PF04607 Region found in RelA / SpoT proteins DYI28_RS24410 PF02824 TGS domain DYI28_RS24410 PF13291 ACT domain DYI28_RS24415 PF01476 LysM domain DYI28_RS24415 PF01464 Transglycosylase SLT domain DYI28_RS24425 PF17762 HTH domain found in ParB protein DYI28_RS24425 PF02195 ParB-like nuclease domain DYI28_RS24430 PF13614 AAA domain DYI28_RS24435 PF01975 Survival protein SurE DYI28_RS24440 PF02684 Lipid-A-disaccharide synthetase DYI28_RS24460 PF00004 ATPase family associated with various cellular activities (AAA) DYI28_RS24460 PF01434 Peptidase family M41 DYI28_RS24460 PF17862 AAA+ lid domain DYI28_RS24475 PF03993 Domain of Unknown Function (DUF349) DYI28_RS24480 PF03448 MgtE intracellular N domain DYI28_RS24480 PF01769 Divalent cation transporter DYI28_RS24480 PF00571 CBS domain DYI28_RS24485 PF00398 Ribosomal RNA adenine dimethylase DYI28_RS24495 PF01546 Peptidase family M20/M25/M40 DYI28_RS24495 PF07687 Peptidase dimerisation domain DYI28_RS24505 PF01835 MG2 domain DYI28_RS24505 PF07703 Alpha-2-macroglobulin bait region domain DYI28_RS24505 PF00207 Alpha-2-macroglobulin family DYI28_RS24575 PF00924 Mechanosensitive ion channel DYI28_RS24580 PF12833 Helix-turn-helix domain DYI28_RS24580 PF07883 Cupin domain DYI28_RS24595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS24595 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS24595 PF18415 Histidine kinase receptor ArcB trans-membrane domain DYI28_RS24595 PF01627 Hpt domain DYI28_RS24595 PF00989 PAS fold DYI28_RS24595 PF00072 Response regulator receiver domain DYI28_RS24600 PF00361 Proton-conducting membrane transporter DYI28_RS24605 PF00361 Proton-conducting membrane transporter DYI28_RS24610 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DYI28_RS24610 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DYI28_RS24610 PF00361 Proton-conducting membrane transporter DYI28_RS24615 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DYI28_RS24620 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DYI28_RS24625 PF12838 4Fe-4S dicluster domain DYI28_RS24630 PF00146 NADH dehydrogenase DYI28_RS24635 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DYI28_RS24635 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DYI28_RS24640 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DYI28_RS24645 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DYI28_RS24680 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS24680 PF00703 Glycosyl hydrolases family 2 DYI28_RS24680 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain DYI28_RS24690 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain DYI28_RS24690 PF08531 Alpha-L-rhamnosidase N-terminal domain DYI28_RS24690 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain DYI28_RS24690 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain DYI28_RS24715 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS24715 PF00593 TonB dependent receptor DYI28_RS24720 PF07980 SusD family DYI28_RS24720 PF14322 Starch-binding associating with outer membrane DYI28_RS24725 PF00593 TonB dependent receptor DYI28_RS24725 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS24745 PF07971 Glycosyl hydrolase family 92 DYI28_RS24745 PF17678 Glycosyl hydrolase family 92 N-terminal domain DYI28_RS24760 PF02386 Cation transport protein DYI28_RS24765 PF02254 TrkA-N domain DYI28_RS24765 PF02080 TrkA-C domain DYI28_RS24770 PF02780 Transketolase, C-terminal domain DYI28_RS24770 PF02779 Transketolase, pyrimidine binding domain DYI28_RS24770 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DYI28_RS24780 PF00842 Alanine racemase, C-terminal domain DYI28_RS24780 PF01168 Alanine racemase, N-terminal domain DYI28_RS24785 PF02416 mttA/Hcf106 family DYI28_RS24790 PF00902 Sec-independent protein translocase protein (TatC) DYI28_RS24800 PF07690 Major Facilitator Superfamily DYI28_RS24805 PF04962 KduI/IolB family DYI28_RS24810 PF03611 PTS system sugar-specific permease component DYI28_RS24815 PF07470 Glycosyl Hydrolase Family 88 DYI28_RS24825 PF13472 GDSL-like Lipase/Acylhydrolase family DYI28_RS24830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS24830 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS24830 PF12833 Helix-turn-helix domain DYI28_RS24830 PF00072 Response regulator receiver domain DYI28_RS24830 PF07495 Y_Y_Y domain DYI28_RS24830 PF07494 Two component regulator propeller DYI28_RS24865 PF14322 Starch-binding associating with outer membrane DYI28_RS24865 PF07980 SusD family DYI28_RS24870 PF00593 TonB dependent receptor DYI28_RS24870 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS24880 PF04397 LytTr DNA-binding domain DYI28_RS24880 PF00072 Response regulator receiver domain DYI28_RS24905 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS24905 PF00593 TonB dependent receptor DYI28_RS24910 PF14322 Starch-binding associating with outer membrane DYI28_RS24910 PF07980 SusD family DYI28_RS24925 PF01095 Pectinesterase DYI28_RS24930 PF00295 Glycosyl hydrolases family 28 DYI28_RS24935 PF01609 Transposase DDE domain DYI28_RS24935 PF13808 DDE_Tnp_1-associated DYI28_RS24945 PF05958 tRNA (Uracil-5-)-methyltransferase DYI28_RS24945 PF01938 TRAM domain DYI28_RS24950 PF07495 Y_Y_Y domain DYI28_RS24950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS24950 PF00072 Response regulator receiver domain DYI28_RS24950 PF07494 Two component regulator propeller DYI28_RS24950 PF12833 Helix-turn-helix domain DYI28_RS24950 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS24955 PF16199 Radical_SAM C-terminal domain DYI28_RS24955 PF04055 Radical SAM superfamily DYI28_RS24960 PF00753 Metallo-beta-lactamase superfamily DYI28_RS24960 PF00258 Flavodoxin DYI28_RS24960 PF00301 Rubredoxin DYI28_RS24965 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DYI28_RS24970 PF13472 GDSL-like Lipase/Acylhydrolase family DYI28_RS24970 PF07859 alpha/beta hydrolase fold DYI28_RS24975 PF01300 Telomere recombination DYI28_RS24985 PF02689 Helicase DYI28_RS24985 PF05970 PIF1-like helicase DYI28_RS25000 PF00155 Aminotransferase class I and II DYI28_RS25010 PF12708 Pectate lyase superfamily protein DYI28_RS25010 PF08548 Peptidase M10 serralysin C terminal DYI28_RS25010 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DYI28_RS25025 PF13472 GDSL-like Lipase/Acylhydrolase family DYI28_RS25040 PF08532 Beta-galactosidase trimerisation domain DYI28_RS25040 PF08533 Beta-galactosidase C-terminal domain DYI28_RS25040 PF02449 Beta-galactosidase DYI28_RS25060 PF07980 SusD family DYI28_RS25060 PF14322 Starch-binding associating with outer membrane DYI28_RS25065 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS25065 PF00593 TonB dependent receptor DYI28_RS25080 PF13149 Fimbrillin-like DYI28_RS25085 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS25085 PF00593 TonB dependent receptor DYI28_RS25105 PF18370 Rhamnogalacturonan I lyases beta-sheet domain DYI28_RS25120 PF00657 GDSL-like Lipase/Acylhydrolase DYI28_RS25130 PF01839 FG-GAP repeat DYI28_RS25130 PF18370 Rhamnogalacturonan I lyases beta-sheet domain DYI28_RS25140 PF05336 L-rhamnose mutarotase DYI28_RS25145 PF12833 Helix-turn-helix domain DYI28_RS25145 PF00072 Response regulator receiver domain DYI28_RS25145 PF07494 Two component regulator propeller DYI28_RS25145 PF07494 Two component regulator propeller DYI28_RS25145 PF12833 Helix-turn-helix domain DYI28_RS25145 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS25145 PF07495 Y_Y_Y domain DYI28_RS25145 PF00072 Response regulator receiver domain DYI28_RS25145 PF07495 Y_Y_Y domain DYI28_RS25145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS25145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS25145 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS25150 PF13472 GDSL-like Lipase/Acylhydrolase family DYI28_RS25150 PF07859 alpha/beta hydrolase fold DYI28_RS25165 PF07470 Glycosyl Hydrolase Family 88 DYI28_RS25180 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS25180 PF00593 TonB dependent receptor DYI28_RS25185 PF14322 Starch-binding associating with outer membrane DYI28_RS25185 PF07980 SusD family DYI28_RS25200 PF00593 TonB dependent receptor DYI28_RS25200 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS25220 PF00295 Glycosyl hydrolases family 28 DYI28_RS25280 PF07495 Y_Y_Y domain DYI28_RS25280 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS25280 PF07494 Two component regulator propeller DYI28_RS25280 PF07494 Two component regulator propeller DYI28_RS25280 PF12833 Helix-turn-helix domain DYI28_RS25280 PF12833 Helix-turn-helix domain DYI28_RS25280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS25280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS25280 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS25280 PF00072 Response regulator receiver domain DYI28_RS25280 PF00072 Response regulator receiver domain DYI28_RS25280 PF07495 Y_Y_Y domain DYI28_RS25285 PF07470 Glycosyl Hydrolase Family 88 DYI28_RS25300 PF13419 Haloacid dehalogenase-like hydrolase DYI28_RS25315 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DYI28_RS25315 PF04616 Glycosyl hydrolases family 43 DYI28_RS25325 PF00295 Glycosyl hydrolases family 28 DYI28_RS25340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYI28_RS25350 PF04055 Radical SAM superfamily DYI28_RS25355 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DYI28_RS25355 PF00326 Prolyl oligopeptidase family DYI28_RS25370 PF00593 TonB dependent receptor DYI28_RS25370 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS25385 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DYI28_RS25385 PF00132 Bacterial transferase hexapeptide (six repeats) DYI28_RS25390 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DYI28_RS25390 PF07977 FabA-like domain DYI28_RS25395 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DYI28_RS25395 PF00132 Bacterial transferase hexapeptide (six repeats) DYI28_RS25400 PF01966 HD domain DYI28_RS25405 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DYI28_RS25410 PF00472 RF-1 domain DYI28_RS25410 PF03462 PCRF domain DYI28_RS25415 PF02769 AIR synthase related protein, C-terminal domain DYI28_RS25415 PF00586 AIR synthase related protein, N-terminal domain DYI28_RS25420 PF04011 LemA family DYI28_RS25435 PF01488 Shikimate / quinate 5-dehydrogenase DYI28_RS25435 PF08501 Shikimate dehydrogenase substrate binding domain DYI28_RS25435 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DYI28_RS25445 PF01209 ubiE/COQ5 methyltransferase family DYI28_RS25450 PF01259 SAICAR synthetase DYI28_RS25455 PF02562 PhoH-like protein DYI28_RS25475 PF01145 SPFH domain / Band 7 family DYI28_RS25475 PF15975 Flotillin DYI28_RS25485 PF01416 tRNA pseudouridine synthase DYI28_RS25500 PF01636 Phosphotransferase enzyme family DYI28_RS25505 PF16353 Domain of unknown function(DUF4981) DYI28_RS25505 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS25505 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYI28_RS25505 PF00703 Glycosyl hydrolases family 2 DYI28_RS25505 PF02929 Beta galactosidase small chain DYI28_RS25510 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DYI28_RS25510 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DYI28_RS25515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYI28_RS25520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYI28_RS25535 PF00885 6,7-dimethyl-8-ribityllumazine synthase DYI28_RS25545 PF02463 RecF/RecN/SMC N terminal domain DYI28_RS25560 PF01812 5-formyltetrahydrofolate cyclo-ligase family DYI28_RS25565 PF03572 Peptidase family S41 DYI28_RS25565 PF13180 PDZ domain DYI28_RS25570 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DYI28_RS25580 PF01432 Peptidase family M3 DYI28_RS25585 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DYI28_RS25585 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DYI28_RS25590 PF01741 Large-conductance mechanosensitive channel, MscL DYI28_RS25595 PF02540 NAD synthase DYI28_RS25595 PF00958 GMP synthase C terminal domain DYI28_RS25595 PF00117 Glutamine amidotransferase class-I DYI28_RS25620 PF13439 Glycosyltransferase Family 4 DYI28_RS25620 PF00534 Glycosyl transferases group 1 DYI28_RS25640 PF08323 Starch synthase catalytic domain DYI28_RS25640 PF00534 Glycosyl transferases group 1 DYI28_RS25645 PF02569 Pantoate-beta-alanine ligase DYI28_RS25650 PF02261 Aspartate decarboxylase DYI28_RS25655 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DYI28_RS25655 PF00175 Oxidoreductase NAD-binding domain DYI28_RS25655 PF00970 Oxidoreductase FAD-binding domain DYI28_RS25660 PF02403 Seryl-tRNA synthetase N-terminal domain DYI28_RS25660 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYI28_RS25665 PF01016 Ribosomal L27 protein DYI28_RS25670 PF00829 Ribosomal prokaryotic L21 protein DYI28_RS25675 PF13419 Haloacid dehalogenase-like hydrolase DYI28_RS25685 PF00877 NlpC/P60 family DYI28_RS25690 PF00005 ABC transporter DYI28_RS25700 PF00675 Insulinase (Peptidase family M16) DYI28_RS25700 PF05193 Peptidase M16 inactive domain DYI28_RS25705 PF00793 DAHP synthetase I family DYI28_RS25710 PF00781 Diacylglycerol kinase catalytic domain DYI28_RS25730 PF00005 ABC transporter DYI28_RS25745 PF02577 Bifunctional nuclease DYI28_RS25750 PF03825 Nucleoside H+ symporter DYI28_RS25765 PF10672 S-adenosylmethionine-dependent methyltransferase DYI28_RS25765 PF17785 PUA-like domain DYI28_RS25780 PF09397 Ftsk gamma domain DYI28_RS25780 PF01580 FtsK/SpoIIIE family DYI28_RS25780 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DYI28_RS25780 PF17854 FtsK alpha domain DYI28_RS25790 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYI28_RS25795 PF07691 PA14 domain DYI28_RS25795 PF02838 Glycosyl hydrolase family 20, domain 2 DYI28_RS25795 PF00728 Glycosyl hydrolase family 20, catalytic domain DYI28_RS25800 PF00085 Thioredoxin DYI28_RS25815 PF00082 Subtilase family DYI28_RS25835 PF00593 TonB dependent receptor DYI28_RS25835 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS25855 PF00120 Glutamine synthetase, catalytic domain DYI28_RS25855 PF18318 Glutamine synthetase C-terminal domain DYI28_RS25855 PF12437 Glutamine synthetase type III N terminal DYI28_RS25870 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DYI28_RS25875 PF13086 AAA domain DYI28_RS25875 PF13195 Protein of unknown function (DUF4011) DYI28_RS25875 PF13195 Protein of unknown function (DUF4011) DYI28_RS25875 PF13087 AAA domain DYI28_RS25875 PF13086 AAA domain DYI28_RS25875 PF13087 AAA domain DYI28_RS25880 PF00575 S1 RNA binding domain DYI28_RS25885 PF12706 Beta-lactamase superfamily domain DYI28_RS25890 PF01471 Putative peptidoglycan binding domain DYI28_RS25890 PF03734 L,D-transpeptidase catalytic domain DYI28_RS25895 PF04542 Sigma-70 region 2 DYI28_RS25895 PF08281 Sigma-70, region 4 DYI28_RS25910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYI28_RS25910 PF03819 MazG nucleotide pyrophosphohydrolase domain DYI28_RS25930 PF00133 tRNA synthetases class I (I, L, M and V) DYI28_RS25930 PF10458 Valyl tRNA synthetase tRNA binding arm DYI28_RS25930 PF08264 Anticodon-binding domain of tRNA DYI28_RS25935 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS25935 PF09308 LuxQ, periplasmic DYI28_RS25935 PF00072 Response regulator receiver domain DYI28_RS25935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS25940 PF04542 Sigma-70 region 2 DYI28_RS25940 PF08281 Sigma-70, region 4 DYI28_RS25950 PF00593 TonB dependent receptor DYI28_RS25950 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS25955 PF07980 SusD family DYI28_RS25955 PF14322 Starch-binding associating with outer membrane DYI28_RS25970 PF00728 Glycosyl hydrolase family 20, catalytic domain DYI28_RS25970 PF02838 Glycosyl hydrolase family 20, domain 2 DYI28_RS25970 PF07691 PA14 domain DYI28_RS25985 PF08281 Sigma-70, region 4 DYI28_RS25985 PF04542 Sigma-70 region 2 DYI28_RS25995 PF00593 TonB dependent receptor DYI28_RS25995 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS26000 PF07980 SusD family DYI28_RS26025 PF07517 SecA DEAD-like domain DYI28_RS26025 PF01043 SecA preprotein cross-linking domain DYI28_RS26025 PF07516 SecA Wing and Scaffold domain DYI28_RS26025 PF02810 SEC-C motif DYI28_RS26030 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase DYI28_RS26040 PF03309 Type III pantothenate kinase DYI28_RS26060 PF00571 CBS domain DYI28_RS26060 PF03471 Transporter associated domain DYI28_RS26065 PF00639 PPIC-type PPIASE domain DYI28_RS26065 PF09312 SurA N-terminal domain DYI28_RS26075 PF04055 Radical SAM superfamily DYI28_RS26085 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DYI28_RS26090 PF00158 Sigma-54 interaction domain DYI28_RS26090 PF02954 Bacterial regulatory protein, Fis family DYI28_RS26090 PF00072 Response regulator receiver domain DYI28_RS26115 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DYI28_RS26130 PF01256 Carbohydrate kinase DYI28_RS26130 PF03853 YjeF-related protein N-terminus DYI28_RS26145 PF00854 POT family DYI28_RS26150 PF00156 Phosphoribosyl transferase domain DYI28_RS26160 PF01018 GTP1/OBG DYI28_RS26160 PF01926 50S ribosome-binding GTPase DYI28_RS26165 PF02578 Multi-copper polyphenol oxidoreductase laccase DYI28_RS26175 PF01551 Peptidase family M23 DYI28_RS26175 PF04225 Opacity-associated protein A LysM-like domain DYI28_RS26180 PF10282 Lactonase, 7-bladed beta-propeller DYI28_RS26230 PF00817 impB/mucB/samB family DYI28_RS26230 PF11799 impB/mucB/samB family C-terminal domain DYI28_RS26230 PF11798 IMS family HHH motif DYI28_RS26265 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DYI28_RS26270 PF03932 CutC family DYI28_RS26275 PF12072 Domain of unknown function (DUF3552) DYI28_RS26275 PF00013 KH domain DYI28_RS26275 PF01966 HD domain DYI28_RS26295 PF00356 Bacterial regulatory proteins, lacI family DYI28_RS26300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYI28_RS26300 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYI28_RS26315 PF00593 TonB dependent receptor DYI28_RS26315 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS26320 PF07980 SusD family DYI28_RS26320 PF14322 Starch-binding associating with outer membrane DYI28_RS26340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYI28_RS26340 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYI28_RS26350 PF08125 Mannitol dehydrogenase C-terminal domain DYI28_RS26350 PF01232 Mannitol dehydrogenase Rossmann domain DYI28_RS26360 PF00107 Zinc-binding dehydrogenase DYI28_RS26360 PF08240 Alcohol dehydrogenase GroES-like domain DYI28_RS26375 PF01048 Phosphorylase superfamily DYI28_RS26380 PF04304 Protein of unknown function (DUF454) DYI28_RS26390 PF04055 Radical SAM superfamily DYI28_RS26395 PF02754 Cysteine-rich domain DYI28_RS26400 PF02589 LUD domain DYI28_RS26400 PF13183 4Fe-4S dicluster domain DYI28_RS26400 PF11870 Domain of unknown function (DUF3390) DYI28_RS26410 PF08543 Phosphomethylpyrimidine kinase DYI28_RS26415 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS26415 PF00593 TonB dependent receptor DYI28_RS26440 PF12450 von Willebrand factor DYI28_RS26440 PF00092 von Willebrand factor type A domain DYI28_RS26440 PF12034 Domain of unknown function (DUF3520) DYI28_RS26450 PF03960 ArsC family DYI28_RS26460 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS26460 PF00593 TonB dependent receptor DYI28_RS26475 PF00860 Permease family DYI28_RS26480 PF12544 Lysine-2,3-aminomutase DYI28_RS26480 PF04055 Radical SAM superfamily DYI28_RS26495 PF01235 Sodium:alanine symporter family DYI28_RS26530 PF02308 MgtC family DYI28_RS26550 PF00520 Ion transport protein DYI28_RS26550 PF00027 Cyclic nucleotide-binding domain DYI28_RS26555 PF01476 LysM domain DYI28_RS26555 PF01464 Transglycosylase SLT domain DYI28_RS26560 PF08338 Domain of unknown function (DUF1731) DYI28_RS26560 PF01370 NAD dependent epimerase/dehydratase family DYI28_RS26575 PF09827 CRISPR associated protein Cas2 DYI28_RS26585 PF00106 short chain dehydrogenase DYI28_RS26595 PF02386 Cation transport protein DYI28_RS26605 PF01554 MatE DYI28_RS26615 PF00849 RNA pseudouridylate synthase DYI28_RS26625 PF01575 MaoC like domain DYI28_RS26645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DYI28_RS26655 PF07516 SecA Wing and Scaffold domain DYI28_RS26655 PF01043 SecA preprotein cross-linking domain DYI28_RS26655 PF07517 SecA DEAD-like domain DYI28_RS26655 PF02810 SEC-C motif DYI28_RS26675 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) DYI28_RS26675 PF00271 Helicase conserved C-terminal domain DYI28_RS26675 PF08463 EcoEI R protein C-terminal DYI28_RS26675 PF04851 Type III restriction enzyme, res subunit DYI28_RS26680 PF02384 N-6 DNA Methylase DYI28_RS26680 PF12161 HsdM N-terminal domain DYI28_RS26685 PF01420 Type I restriction modification DNA specificity domain DYI28_RS26700 PF01420 Type I restriction modification DNA specificity domain DYI28_RS26705 PF12102 Domain of unknown function (DUF3578) DYI28_RS26705 PF07728 AAA domain (dynein-related subfamily) DYI28_RS26710 PF10117 McrBC 5-methylcytosine restriction system component DYI28_RS26725 PF00704 Glycosyl hydrolases family 18 DYI28_RS26730 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS26730 PF00593 TonB dependent receptor DYI28_RS26745 PF00704 Glycosyl hydrolases family 18 DYI28_RS26770 PF13195 Protein of unknown function (DUF4011) DYI28_RS26770 PF13087 AAA domain DYI28_RS26770 PF13086 AAA domain DYI28_RS26775 PF00107 Zinc-binding dehydrogenase DYI28_RS26775 PF08240 Alcohol dehydrogenase GroES-like domain DYI28_RS26775 PF13823 Alcohol dehydrogenase GroES-associated DYI28_RS26785 PF00588 SpoU rRNA Methylase family DYI28_RS26790 PF01926 50S ribosome-binding GTPase DYI28_RS26790 PF12631 MnmE helical domain DYI28_RS26790 PF10396 GTP-binding protein TrmE N-terminus DYI28_RS26795 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS26795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS26795 PF00072 Response regulator receiver domain DYI28_RS26795 PF09308 LuxQ, periplasmic DYI28_RS26800 PF11066 Protein of unknown function (DUF2867) DYI28_RS26800 PF13460 NAD(P)H-binding DYI28_RS26805 PF01048 Phosphorylase superfamily DYI28_RS26810 PF12127 SigmaW regulon antibacterial DYI28_RS26825 PF01171 PP-loop family DYI28_RS26835 PF02424 ApbE family DYI28_RS26840 PF02659 Putative manganese efflux pump DYI28_RS26855 PF00535 Glycosyl transferase family 2 DYI28_RS26875 PF03952 Enolase, N-terminal domain DYI28_RS26875 PF00113 Enolase, C-terminal TIM barrel domain DYI28_RS26885 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DYI28_RS26890 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation DYI28_RS26890 PF10566 Glycoside hydrolase 97 DYI28_RS26890 PF14508 Glycosyl-hydrolase 97 N-terminal DYI28_RS26895 PF00156 Phosphoribosyl transferase domain DYI28_RS26900 PF01546 Peptidase family M20/M25/M40 DYI28_RS26900 PF07687 Peptidase dimerisation domain DYI28_RS26905 PF08669 Glycine cleavage T-protein C-terminal barrel domain DYI28_RS26905 PF01571 Aminomethyltransferase folate-binding domain DYI28_RS26910 PF00999 Sodium/hydrogen exchanger family DYI28_RS26910 PF02254 TrkA-N domain DYI28_RS26920 PF01479 S4 domain DYI28_RS26925 PF01195 Peptidyl-tRNA hydrolase DYI28_RS26930 PF01386 Ribosomal L25p family DYI28_RS26930 PF14693 Ribosomal protein TL5, C-terminal domain DYI28_RS26940 PF01029 NusB family DYI28_RS26955 PF01121 Dephospho-CoA kinase DYI28_RS26970 PF00004 ATPase family associated with various cellular activities (AAA) DYI28_RS26970 PF07724 AAA domain (Cdc48 subfamily) DYI28_RS26970 PF17871 AAA lid domain DYI28_RS26970 PF10431 C-terminal, D2-small domain, of ClpB protein DYI28_RS26970 PF02861 Clp amino terminal domain, pathogenicity island component DYI28_RS26980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYI28_RS26980 PF03466 LysR substrate binding domain DYI28_RS27010 PF03601 Conserved hypothetical protein 698 DYI28_RS27015 PF00154 recA bacterial DNA recombination protein DYI28_RS27020 PF00578 AhpC/TSA family DYI28_RS27025 PF03435 Saccharopine dehydrogenase NADP binding domain DYI28_RS27025 PF16653 Saccharopine dehydrogenase C-terminal domain DYI28_RS27045 PF00012 Hsp70 protein DYI28_RS27055 PF00999 Sodium/hydrogen exchanger family DYI28_RS27055 PF02254 TrkA-N domain DYI28_RS27060 PF01384 Phosphate transporter family DYI28_RS27070 PF09335 SNARE associated Golgi protein DYI28_RS27130 PF00654 Voltage gated chloride channel DYI28_RS27140 PF01261 Xylose isomerase-like TIM barrel DYI28_RS27155 PF00480 ROK family DYI28_RS27165 PF16347 Domain of unknown function (DUF4976) DYI28_RS27165 PF00884 Sulfatase DYI28_RS27170 PF16889 Heparinase II/III N-terminus DYI28_RS27170 PF07940 Heparinase II/III-like protein DYI28_RS27175 PF07470 Glycosyl Hydrolase Family 88 DYI28_RS27180 PF14322 Starch-binding associating with outer membrane DYI28_RS27180 PF07980 SusD family DYI28_RS27185 PF00593 TonB dependent receptor DYI28_RS27185 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS27195 PF16889 Heparinase II/III N-terminus DYI28_RS27195 PF07940 Heparinase II/III-like protein DYI28_RS27205 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS27205 PF00072 Response regulator receiver domain DYI28_RS27205 PF07495 Y_Y_Y domain DYI28_RS27205 PF07494 Two component regulator propeller DYI28_RS27205 PF12833 Helix-turn-helix domain DYI28_RS27205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS27210 PF13581 Histidine kinase-like ATPase domain DYI28_RS27235 PF00291 Pyridoxal-phosphate dependent enzyme DYI28_RS27240 PF02386 Cation transport protein DYI28_RS27245 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DYI28_RS27245 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DYI28_RS27245 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DYI28_RS27255 PF09587 Bacterial capsule synthesis protein PGA_cap DYI28_RS27270 PF00703 Glycosyl hydrolases family 2 DYI28_RS27270 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DYI28_RS27270 PF16355 Domain of unknown function (DUF4982) DYI28_RS27270 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYI28_RS27270 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYI28_RS27275 PF07745 Glycosyl hydrolase family 53 DYI28_RS27285 PF07980 SusD family DYI28_RS27290 PF00593 TonB dependent receptor DYI28_RS27290 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS27300 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS27300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS27300 PF07495 Y_Y_Y domain DYI28_RS27300 PF00072 Response regulator receiver domain DYI28_RS27300 PF07494 Two component regulator propeller DYI28_RS27300 PF12833 Helix-turn-helix domain DYI28_RS27315 PF14099 Polysaccharide lyase DYI28_RS27345 PF02397 Bacterial sugar transferase DYI28_RS27350 PF00483 Nucleotidyl transferase DYI28_RS27355 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DYI28_RS27360 PF16363 GDP-mannose 4,6 dehydratase DYI28_RS27365 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DYI28_RS27365 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DYI28_RS27365 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DYI28_RS27370 PF01370 NAD dependent epimerase/dehydratase family DYI28_RS27375 PF01370 NAD dependent epimerase/dehydratase family DYI28_RS27395 PF03275 UDP-galactopyranose mutase DYI28_RS27400 PF01531 Glycosyl transferase family 11 DYI28_RS27405 PF00534 Glycosyl transferases group 1 DYI28_RS27405 PF13439 Glycosyltransferase Family 4 DYI28_RS27420 PF00534 Glycosyl transferases group 1 DYI28_RS27420 PF13439 Glycosyltransferase Family 4 DYI28_RS27425 PF16363 GDP-mannose 4,6 dehydratase DYI28_RS27445 PF08011 PD-(D/E)XK nuclease superfamily DYI28_RS27445 PF09820 Predicted AAA-ATPase DYI28_RS27460 PF03315 Serine dehydratase beta chain DYI28_RS27460 PF03313 Serine dehydratase alpha chain DYI28_RS27465 PF01544 CorA-like Mg2+ transporter protein DYI28_RS27470 PF00488 MutS domain V DYI28_RS27470 PF01713 Smr domain DYI28_RS27480 PF01053 Cys/Met metabolism PLP-dependent enzyme DYI28_RS27495 PF00196 Bacterial regulatory proteins, luxR family DYI28_RS27495 PF00072 Response regulator receiver domain DYI28_RS27500 PF05971 RNA methyltransferase DYI28_RS27505 PF14268 YoaP-like DYI28_RS27505 PF00583 Acetyltransferase (GNAT) family DYI28_RS27515 PF04343 Protein of unknown function, DUF488 DYI28_RS27525 PF00425 chorismate binding enzyme DYI28_RS27530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYI28_RS27530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYI28_RS27530 PF16582 Middle domain of thiamine pyrophosphate DYI28_RS27535 PF00378 Enoyl-CoA hydratase/isomerase DYI28_RS27540 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DYI28_RS27540 PF13378 Enolase C-terminal domain-like DYI28_RS27545 PF13193 AMP-binding enzyme C-terminal domain DYI28_RS27545 PF00501 AMP-binding enzyme DYI28_RS27565 PF01344 Kelch motif DYI28_RS27570 PF00701 Dihydrodipicolinate synthetase family DYI28_RS27575 PF14873 N-terminal domain of BNR-repeat neuraminidase DYI28_RS27575 PF13859 BNR repeat-like domain DYI28_RS27585 PF00593 TonB dependent receptor DYI28_RS27585 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS27590 PF14322 Starch-binding associating with outer membrane DYI28_RS27590 PF07980 SusD family DYI28_RS27595 PF13088 BNR repeat-like domain DYI28_RS27595 PF00754 F5/8 type C domain DYI28_RS27595 PF02973 Sialidase, N-terminal domain DYI28_RS27610 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYI28_RS27610 PF14310 Fibronectin type III-like domain DYI28_RS27610 PF00933 Glycosyl hydrolase family 3 N terminal domain DYI28_RS27620 PF12464 Maltose acetyltransferase DYI28_RS27620 PF00132 Bacterial transferase hexapeptide (six repeats) DYI28_RS27640 PF00072 Response regulator receiver domain DYI28_RS27640 PF04397 LytTr DNA-binding domain DYI28_RS27655 PF00593 TonB dependent receptor DYI28_RS27655 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS27675 PF03033 Glycosyltransferase family 28 N-terminal domain DYI28_RS27680 PF04055 Radical SAM superfamily DYI28_RS27680 PF06463 Molybdenum Cofactor Synthesis C DYI28_RS27685 PF00085 Thioredoxin DYI28_RS27690 PF01139 tRNA-splicing ligase RtcB DYI28_RS27715 PF02652 L-lactate permease DYI28_RS27730 PF01039 Carboxyl transferase domain DYI28_RS27735 PF00289 Biotin carboxylase, N-terminal domain DYI28_RS27735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DYI28_RS27735 PF02785 Biotin carboxylase C-terminal domain DYI28_RS27740 PF00364 Biotin-requiring enzyme DYI28_RS27745 PF00072 Response regulator receiver domain DYI28_RS27745 PF09308 LuxQ, periplasmic DYI28_RS27745 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS27745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS27760 PF08241 Methyltransferase domain DYI28_RS27765 PF08241 Methyltransferase domain DYI28_RS27765 PF04301 Protein of unknown function (DUF452) DYI28_RS27770 PF00155 Aminotransferase class I and II DYI28_RS27775 PF06968 Biotin and Thiamin Synthesis associated domain DYI28_RS27775 PF04055 Radical SAM superfamily DYI28_RS27775 PF00202 Aminotransferase class-III DYI28_RS27785 PF00593 TonB dependent receptor DYI28_RS27785 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS27795 PF07690 Major Facilitator Superfamily DYI28_RS27810 PF00356 Bacterial regulatory proteins, lacI family DYI28_RS27815 PF00106 short chain dehydrogenase DYI28_RS27820 PF03786 D-mannonate dehydratase (UxuA) DYI28_RS27825 PF11490 DNA polymerase III polC-type N-terminus II DYI28_RS27825 PF07733 Bacterial DNA polymerase III alpha NTPase domain DYI28_RS27825 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DYI28_RS27825 PF14579 Helix-hairpin-helix motif DYI28_RS27825 PF00929 Exonuclease DYI28_RS27825 PF02811 PHP domain DYI28_RS27865 PF03193 RsgA GTPase DYI28_RS27920 PF09820 Predicted AAA-ATPase DYI28_RS27920 PF08011 PD-(D/E)XK nuclease superfamily DYI28_RS27935 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS27935 PF00593 TonB dependent receptor DYI28_RS27940 PF07980 SusD family DYI28_RS27940 PF14322 Starch-binding associating with outer membrane DYI28_RS27970 PF00593 TonB dependent receptor DYI28_RS27970 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS27985 PF02335 Cytochrome c552 DYI28_RS27995 PF01578 Cytochrome C assembly protein DYI28_RS28005 PF00881 Nitroreductase family DYI28_RS28010 PF00248 Aldo/keto reductase family DYI28_RS28015 PF07690 Major Facilitator Superfamily DYI28_RS28020 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DYI28_RS28035 PF02525 Flavodoxin-like fold DYI28_RS28060 PF02780 Transketolase, C-terminal domain DYI28_RS28060 PF02779 Transketolase, pyrimidine binding domain DYI28_RS28060 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DYI28_RS28075 PF07690 Major Facilitator Superfamily DYI28_RS28080 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DYI28_RS28095 PF00155 Aminotransferase class I and II DYI28_RS28105 PF03477 ATP cone domain DYI28_RS28105 PF13597 Anaerobic ribonucleoside-triphosphate reductase DYI28_RS28110 PF13505 Outer membrane protein beta-barrel domain DYI28_RS28110 PF00691 OmpA family DYI28_RS28115 PF05406 WGR domain DYI28_RS28130 PF04055 Radical SAM superfamily DYI28_RS28130 PF06969 HemN C-terminal domain DYI28_RS28140 PF01554 MatE DYI28_RS28160 PF08361 MAATS-type transcriptional repressor, C-terminal region DYI28_RS28160 PF00440 Bacterial regulatory proteins, tetR family DYI28_RS28165 PF01869 BadF/BadG/BcrA/BcrD ATPase family DYI28_RS28205 PF00583 Acetyltransferase (GNAT) family DYI28_RS28220 PF00551 Formyl transferase DYI28_RS28220 PF01842 ACT domain DYI28_RS28225 PF00117 Glutamine amidotransferase class-I DYI28_RS28230 PF00977 Histidine biosynthesis protein DYI28_RS28235 PF00977 Histidine biosynthesis protein DYI28_RS28240 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DYI28_RS28240 PF01502 Phosphoribosyl-AMP cyclohydrolase DYI28_RS28245 PF00005 ABC transporter DYI28_RS28250 PF01842 ACT domain DYI28_RS28250 PF00696 Amino acid kinase family DYI28_RS28255 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DYI28_RS28255 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DYI28_RS28260 PF00210 Ferritin-like domain DYI28_RS28265 PF18698 Histidine kinase sensor domain DYI28_RS28265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS28265 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS28265 PF00672 HAMP domain DYI28_RS28275 PF00155 Aminotransferase class I and II DYI28_RS28280 PF01370 NAD dependent epimerase/dehydratase family DYI28_RS28290 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DYI28_RS28290 PF01565 FAD binding domain DYI28_RS28295 PF03099 Biotin/lipoate A/B protein ligase family DYI28_RS28295 PF12706 Beta-lactamase superfamily domain DYI28_RS28310 PF02768 DNA polymerase III beta subunit, C-terminal domain DYI28_RS28310 PF02767 DNA polymerase III beta subunit, central domain DYI28_RS28310 PF00712 DNA polymerase III beta subunit, N-terminal domain DYI28_RS28320 PF02441 Flavoprotein DYI28_RS28320 PF04127 DNA / pantothenate metabolism flavoprotein DYI28_RS28325 PF02463 RecF/RecN/SMC N terminal domain DYI28_RS28330 PF08032 RNA 2'-O ribose methyltransferase substrate binding DYI28_RS28330 PF00588 SpoU rRNA Methylase family DYI28_RS28360 PF02397 Bacterial sugar transferase DYI28_RS28380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYI28_RS28390 PF00535 Glycosyl transferase family 2 DYI28_RS28410 PF00288 GHMP kinases N terminal domain DYI28_RS28410 PF08544 GHMP kinases C terminal DYI28_RS28415 PF13580 SIS domain DYI28_RS28425 PF13579 Glycosyl transferase 4-like domain DYI28_RS28430 PF16363 GDP-mannose 4,6 dehydratase DYI28_RS28440 PF01510 N-acetylmuramoyl-L-alanine amidase DYI28_RS28495 PF03781 Sulfatase-modifying factor enzyme 1 DYI28_RS28500 PF01042 Endoribonuclease L-PSP DYI28_RS28505 PF08245 Mur ligase middle domain DYI28_RS28505 PF02875 Mur ligase family, glutamate ligase domain DYI28_RS28510 PF02562 PhoH-like protein DYI28_RS28510 PF13638 PIN domain DYI28_RS28515 PF01180 Dihydroorotate dehydrogenase DYI28_RS28520 PF01168 Alanine racemase, N-terminal domain DYI28_RS28535 PF08534 Redoxin DYI28_RS28545 PF09335 SNARE associated Golgi protein DYI28_RS28555 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DYI28_RS28555 PF00749 tRNA synthetases class I (E and Q), catalytic domain DYI28_RS28565 PF00528 Binding-protein-dependent transport system inner membrane component DYI28_RS28570 PF00528 Binding-protein-dependent transport system inner membrane component DYI28_RS28575 PF00005 ABC transporter DYI28_RS28580 PF01895 PhoU domain DYI28_RS28585 PF00677 Lumazine binding domain DYI28_RS28590 PF00881 Nitroreductase family DYI28_RS28600 PF03631 Virulence factor BrkB DYI28_RS28610 PF00877 NlpC/P60 family DYI28_RS28610 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain DYI28_RS28615 PF13378 Enolase C-terminal domain-like DYI28_RS28615 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DYI28_RS28620 PF17820 PDZ domain DYI28_RS28620 PF13180 PDZ domain DYI28_RS28625 PF03979 Sigma-70 factor, region 1.1 DYI28_RS28625 PF00140 Sigma-70 factor, region 1.2 DYI28_RS28625 PF04542 Sigma-70 region 2 DYI28_RS28625 PF04539 Sigma-70 region 3 DYI28_RS28625 PF04545 Sigma-70, region 4 DYI28_RS28690 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYI28_RS28690 PF16886 ATPsynthase alpha/beta subunit N-term extension DYI28_RS28690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYI28_RS28695 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYI28_RS28695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYI28_RS28710 PF00137 ATP synthase subunit C DYI28_RS28720 PF11897 Protein of unknown function (DUF3417) DYI28_RS28720 PF00343 Carbohydrate phosphorylase DYI28_RS28725 PF00578 AhpC/TSA family DYI28_RS28730 PF08402 TOBE domain DYI28_RS28730 PF00005 ABC transporter DYI28_RS28735 PF00528 Binding-protein-dependent transport system inner membrane component DYI28_RS28740 PF00528 Binding-protein-dependent transport system inner membrane component DYI28_RS28745 PF13416 Bacterial extracellular solute-binding protein DYI28_RS28760 PF00072 Response regulator receiver domain DYI28_RS28760 PF00486 Transcriptional regulatory protein, C terminal DYI28_RS28800 PF07690 Major Facilitator Superfamily DYI28_RS28810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DYI28_RS28810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DYI28_RS28820 PF07882 L-fucose isomerase, second N-terminal domain DYI28_RS28820 PF07881 L-fucose isomerase, first N-terminal domain DYI28_RS28820 PF02952 L-fucose isomerase, C-terminal domain DYI28_RS28825 PF00392 Bacterial regulatory proteins, gntR family DYI28_RS28825 PF07729 FCD domain DYI28_RS28830 PF00886 Ribosomal protein S16 DYI28_RS28840 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS28840 PF01627 Hpt domain DYI28_RS28840 PF00072 Response regulator receiver domain DYI28_RS28840 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYI28_RS28840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS28845 PF09308 LuxQ, periplasmic DYI28_RS28845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI28_RS28845 PF00512 His Kinase A (phospho-acceptor) domain DYI28_RS28845 PF00072 Response regulator receiver domain DYI28_RS28855 PF01638 HxlR-like helix-turn-helix DYI28_RS28865 PF06123 Inner membrane protein CreD DYI28_RS28890 PF13533 Biotin-lipoyl like DYI28_RS28900 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DYI28_RS28900 PF08666 SAF domain DYI28_RS28905 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DYI28_RS28905 PF00356 Bacterial regulatory proteins, lacI family DYI28_RS28910 PF00294 pfkB family carbohydrate kinase DYI28_RS28935 PF02514 CobN/Magnesium Chelatase DYI28_RS28940 PF00593 TonB dependent receptor DYI28_RS28940 PF07715 TonB-dependent Receptor Plug Domain DYI28_RS28990 PF06250 YhcG PDDEXK nuclease domain DYI28_RS28990 PF17761 DUF1016 N-terminal domain DYI28_RS29005 PF01751 Toprim domain DYI28_RS29005 PF01131 DNA topoisomerase DYI28_RS29020 PF00589 Phage integrase family DYI28_RS29020 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS29150 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DYI28_RS29150 PF01348 Type II intron maturase DYI28_RS29285 PF00589 Phage integrase family DYI28_RS29285 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS29290 PF00589 Phage integrase family DYI28_RS29290 PF02899 Phage integrase, N-terminal SAM-like domain DYI28_RS29515 PF02796 Helix-turn-helix domain of resolvase DYI28_RS29515 PF00239 Resolvase, N terminal domain DYI28_RS29725 PF05175 Methyltransferase small domain DYI28_RS29890 PF00717 Peptidase S24-like DYI28_RS29895 PF11799 impB/mucB/samB family C-terminal domain DYI28_RS29895 PF13438 Domain of unknown function (DUF4113) DYI28_RS29895 PF00817 impB/mucB/samB family DYI28_RS29955 PF10145 Phage-related minor tail protein DYI28_RS29955 PF01551 Peptidase family M23 DYI28_RS29955 PF01464 Transglycosylase SLT domain DYI28_RS30000 PF00216 Bacterial DNA-binding protein DYI28_RS30120 PF18818 Metallopeptidase superfamily domain DYI28_RS30120 PF08401 Domain of unknown function (DUF1738) DYI28_RS30125 PF00239 Resolvase, N terminal domain DYI28_RS30125 PF02796 Helix-turn-helix domain of resolvase