BT_0014 SM00387 Histidine kinase-like ATPases BT_0014 SM00388 His Kinase A (phosphoacceptor) domain BT_0014 SM00448 cheY-homologous receiver domain BT_0015 SM00382 ATPases associated with a variety of cellular activities BT_0015 SM00448 cheY-homologous receiver domain BT_0031 SM00481 DNA polymerase alpha chain like domain BT_0105 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BT_0105 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BT_0105 SM00493 BT_0105 BT_0115 SM00226 Low molecular weight phosphatase family BT_0116 SM00382 ATPases associated with a variety of cellular activities BT_0121 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BT_0124 SM00902 Iron hydrogenase small subunit BT_0124 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BT_0125 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BT_0138 SM00342 helix_turn_helix, arabinose operon control protein BT_0142 SM00635 Bacterial Ig-like domain 2 BT_0148 SM01091 Transporter associated domain BT_0156 SM00421 helix_turn_helix, Lux Regulon BT_0164 SM01359 BT_0164 BT_0164 SM01360 BT_0164 BT_0180 SM01018 B12 binding domain BT_0183 SM00062 Bacterial periplasmic substrate-binding proteins BT_0185 SM00886 Stress responsive A/B Barrel Domain BT_0190 SM00965 Secretin and TonB N terminus short domain BT_0192 SM00060 Fibronectin type 3 domain BT_0192 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BT_0192 SM00564 beta-propeller repeat BT_0223 SM00850 LytTr DNA-binding domain BT_0240 SM00028 Tetratricopeptide repeats BT_0243 SM00563 Phosphate acyltransferases BT_0252 SM00487 DEAD-like helicases superfamily BT_0252 SM00490 helicase superfamily c-terminal domain BT_0252 SM00982 BT_0252 BT_0252 SM01058 CarD-like/TRCF domain BT_0254 SM00729 Elongator protein 3, MiaB family, Radical SAM BT_0257 SM00060 Fibronectin type 3 domain BT_0260 SM00563 Phosphate acyltransferases BT_0267 SM00342 helix_turn_helix, arabinose operon control protein BT_0267 SM00387 Histidine kinase-like ATPases BT_0267 SM00388 His Kinase A (phosphoacceptor) domain BT_0267 SM00448 cheY-homologous receiver domain BT_0277 SM01276 BT_0277 BT_0295 SM00382 ATPases associated with a variety of cellular activities BT_0301 SM00382 ATPases associated with a variety of cellular activities BT_0308 SM00641 Glycosyl hydrolases family 25 BT_0312 SM00861 Transketolase, pyrimidine binding domain BT_0327 SM00062 Bacterial periplasmic substrate-binding proteins BT_0334 SM00028 Tetratricopeptide repeats BT_0335 SM00382 ATPases associated with a variety of cellular activities BT_0340 SM01018 B12 binding domain BT_0347 SM00861 Transketolase, pyrimidine binding domain BT_0348 SM00813 Alpha-L-arabinofuranosidase C-terminus BT_0353 SM01007 Class II Aldolase and Adducin N-terminal domain BT_0366 SM00342 helix_turn_helix, arabinose operon control protein BT_0366 SM00387 Histidine kinase-like ATPases BT_0366 SM00388 His Kinase A (phosphoacceptor) domain BT_0366 SM00448 cheY-homologous receiver domain BT_0368 SM00813 Alpha-L-arabinofuranosidase C-terminus BT_0379 SM00984 UDP binding domain BT_0404 SM00942 Primase C terminal 1 (PriCT-1) BT_0419 SM00732 Likely ribonuclease with RNase H fold. BT_0421 SM00028 Tetratricopeptide repeats BT_0422 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BT_0432 SM00477 DNA/RNA non-specific endonuclease BT_0432 SM00892 DNA/RNA non-specific endonuclease BT_0443 SM01217 BT_0443 BT_0462 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BT_0486 SM00858 BT_0486 BT_0487 SM00354 helix_turn _helix lactose operon repressor BT_0506 SM00758 BT_0506 BT_0508 SM00382 ATPases associated with a variety of cellular activities BT_0509 SM00382 ATPases associated with a variety of cellular activities BT_0518 SM00798 AICARFT/IMPCHase bienzyme BT_0520 SM00421 helix_turn_helix, Lux Regulon BT_0524 SM00448 cheY-homologous receiver domain BT_0526 SM00870 BT_0526 BT_0536 SM00387 Histidine kinase-like ATPases BT_0543 SM01230 BT_0543 BT_0545 SM00938 Nitrogen regulatory protein P-II BT_0556 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BT_0557 SM00851 MGS-like domain BT_0557 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BT_0559 SM00342 helix_turn_helix, arabinose operon control protein BT_0562 SM00382 ATPases associated with a variety of cellular activities BT_0566 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BT_0570 SM00487 DEAD-like helicases superfamily BT_0570 SM00490 helicase superfamily c-terminal domain BT_0574 SM01409 BT_0574 BT_0577 SM00257 Lysin motif BT_0596 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BT_0599 SM00984 UDP binding domain BT_0602 SM00984 UDP binding domain BT_0620 SM00900 BT_0620 BT_0626 SM00873 B3/4 domain BT_0626 SM00874 tRNA synthetase B5 domain BT_0626 SM00896 Ferredoxin-fold anticodon binding domain BT_0640 SM00729 Elongator protein 3, MiaB family, Radical SAM BT_0649 SM00876 Biotin and Thiamin Synthesis associated domain BT_0654 SM00387 Histidine kinase-like ATPases BT_0654 SM00388 His Kinase A (phosphoacceptor) domain BT_0681 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BT_0681 SM00387 Histidine kinase-like ATPases BT_0681 SM00388 His Kinase A (phosphoacceptor) domain BT_0682 SM00448 cheY-homologous receiver domain BT_0682 SM00862 Transcriptional regulatory protein, C terminal BT_0688 SM00100 Cyclic nucleotide-monophosphate binding domain BT_0688 SM00419 helix_turn_helix, cAMP Regulatory protein BT_0689 SM00387 Histidine kinase-like ATPases BT_0690 SM00382 ATPases associated with a variety of cellular activities BT_0690 SM00448 cheY-homologous receiver domain BT_0694 SM00382 ATPases associated with a variety of cellular activities BT_0700 SM00954 Region found in RelA / SpoT proteins BT_0702 SM01059 Chloramphenicol acetyltransferase BT_0709 SM00942 Primase C terminal 1 (PriCT-1) BT_0711 SM00382 ATPases associated with a variety of cellular activities BT_0721 SM00341 Helicase and RNase D C-terminal BT_0728 SM00342 helix_turn_helix, arabinose operon control protein BT_0729 SM00342 helix_turn_helix, arabinose operon control protein BT_0732 SM00448 cheY-homologous receiver domain BT_0732 SM00862 Transcriptional regulatory protein, C terminal BT_0733 SM00387 Histidine kinase-like ATPases BT_0733 SM00388 His Kinase A (phosphoacceptor) domain BT_0740 SM00903 Flavin reductase like domain BT_0747 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. BT_0748 SM01400 BT_0748 BT_0749 SM00028 Tetratricopeptide repeats BT_0749 SM00387 Histidine kinase-like ATPases BT_0750 SM00448 cheY-homologous receiver domain BT_0754 SM00965 Secretin and TonB N terminus short domain BT_0760 SM00342 helix_turn_helix, arabinose operon control protein BT_0760 SM00448 cheY-homologous receiver domain BT_0766 SM00028 Tetratricopeptide repeats BT_0771 SM00642 Alpha-amylase domain BT_0773 SM00642 Alpha-amylase domain BT_0784 SM00360 RNA recognition motif BT_0785 SM01230 BT_0785 BT_0787 SM00881 CoA binding domain BT_0789 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BT_0797 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BT_0802 SM00382 ATPases associated with a variety of cellular activities BT_0818 SM00387 Histidine kinase-like ATPases BT_0818 SM00388 His Kinase A (phosphoacceptor) domain BT_0818 SM00448 cheY-homologous receiver domain BT_0822 SM00849 Metallo-beta-lactamase superfamily BT_0824 SM00354 helix_turn _helix lactose operon repressor BT_0829 SM00984 UDP binding domain BT_0831 SM00487 DEAD-like helicases superfamily BT_0831 SM00490 helicase superfamily c-terminal domain BT_0837 SM00382 ATPases associated with a variety of cellular activities BT_0837 SM00464 Found in ATP-dependent protease La (LON) BT_0850 SM00421 helix_turn_helix, Lux Regulon BT_0855 SM00387 Histidine kinase-like ATPases BT_0856 SM00382 ATPases associated with a variety of cellular activities BT_0856 SM00448 cheY-homologous receiver domain BT_0860 SM00382 ATPases associated with a variety of cellular activities BT_0871 SM00046 Diacylglycerol kinase catalytic domain (presumed) BT_0878 SM00382 ATPases associated with a variety of cellular activities BT_0890 SM00530 Helix-turn-helix XRE-family like proteins BT_0894 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BT_0894 SM00292 breast cancer carboxy-terminal domain BT_0894 SM00532 Ligase N family BT_0895 SM01130 BT_0895 BT_0898 SM00382 ATPases associated with a variety of cellular activities BT_0898 SM01086 C-terminal, D2-small domain, of ClpB protein BT_0899 SM00434 DNA Topoisomerase IV BT_0900 SM00028 Tetratricopeptide repeats BT_0903 SM00028 Tetratricopeptide repeats BT_0905 SM00028 Tetratricopeptide repeats BT_0906 SM00327 von Willebrand factor (vWF) type A domain BT_0907 SM00327 von Willebrand factor (vWF) type A domain BT_0911 SM00257 Lysin motif BT_0911 SM00411 bacterial (prokaryotic) histone like domain BT_0912 SM00411 bacterial (prokaryotic) histone like domain BT_0913 SM00729 Elongator protein 3, MiaB family, Radical SAM BT_0914 SM00382 ATPases associated with a variety of cellular activities BT_0914 SM00962 SRP54-type protein, GTPase domain BT_0914 SM00963 SRP54-type protein, helical bundle domain BT_0917 SM00852 Probable molybdopterin binding domain BT_0925 SM00382 ATPases associated with a variety of cellular activities BT_0927 SM00387 Histidine kinase-like ATPases BT_0927 SM00388 His Kinase A (phosphoacceptor) domain BT_0928 SM00448 cheY-homologous receiver domain BT_0928 SM00862 Transcriptional regulatory protein, C terminal BT_0929 SM00946 Prolyl-tRNA synthetase, C-terminal BT_0958 SM00342 helix_turn_helix, arabinose operon control protein BT_0958 SM00387 Histidine kinase-like ATPases BT_0958 SM00388 His Kinase A (phosphoacceptor) domain BT_0958 SM00448 cheY-homologous receiver domain BT_0964 SM00965 Secretin and TonB N terminus short domain BT_0981 SM00342 helix_turn_helix, arabinose operon control protein BT_0981 SM00387 Histidine kinase-like ATPases BT_0981 SM00388 His Kinase A (phosphoacceptor) domain BT_0981 SM00448 cheY-homologous receiver domain BT_0988 SM00831 Cation transporter/ATPase, N-terminus BT_0989 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BT_0989 SM00387 Histidine kinase-like ATPases BT_0989 SM00388 His Kinase A (phosphoacceptor) domain BT_0990 SM00448 cheY-homologous receiver domain BT_0990 SM00862 Transcriptional regulatory protein, C terminal BT_0993 SM01038 Beta galactosidase small chain BT_0994 SM00387 Histidine kinase-like ATPases BT_0994 SM00388 His Kinase A (phosphoacceptor) domain BT_0995 SM00342 helix_turn_helix, arabinose operon control protein BT_0998 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BT_0998 SM00387 Histidine kinase-like ATPases BT_0998 SM00388 His Kinase A (phosphoacceptor) domain BT_1018 SM00710 Parallel beta-helix repeats BT_1042 SM00965 Secretin and TonB N terminus short domain BT_1058 SM00387 Histidine kinase-like ATPases BT_1058 SM00448 cheY-homologous receiver domain BT_1076 SM00448 cheY-homologous receiver domain BT_1076 SM00850 LytTr DNA-binding domain BT_1081 SM00493 BT_1081 BT_1090 SM00342 helix_turn_helix, arabinose operon control protein BT_1098 SM00851 MGS-like domain BT_1105 SM00855 Phosphoglycerate mutase family BT_1106 SM01133 BT_1106 BT_1123 SM00342 helix_turn_helix, arabinose operon control protein BT_1146 SM00849 Metallo-beta-lactamase superfamily BT_1154 SM00487 DEAD-like helicases superfamily BT_1154 SM00490 helicase superfamily c-terminal domain BT_1158 SM00900 BT_1158 BT_1174 SM00530 Helix-turn-helix XRE-family like proteins BT_1183 SM00091 PAS domain BT_1183 SM00387 Histidine kinase-like ATPases BT_1183 SM00388 His Kinase A (phosphoacceptor) domain BT_1183 SM00448 cheY-homologous receiver domain BT_1186 SM00382 ATPases associated with a variety of cellular activities BT_1188 SM00871 Bacterial transcription activator, effector binding domain BT_1189 SM00871 Bacterial transcription activator, effector binding domain BT_1205 SM00382 ATPases associated with a variety of cellular activities BT_1214 SM00382 ATPases associated with a variety of cellular activities BT_1217 SM00448 cheY-homologous receiver domain BT_1217 SM00850 LytTr DNA-binding domain BT_1222 SM01350 BT_1222 BT_1235 SM00342 helix_turn_helix, arabinose operon control protein BT_1237 SM00387 Histidine kinase-like ATPases BT_1237 SM00388 His Kinase A (phosphoacceptor) domain BT_1238 SM00316 Ribosomal protein S1-like RNA-binding domain BT_1238 SM00732 Likely ribonuclease with RNase H fold. BT_1242 SM00382 ATPases associated with a variety of cellular activities BT_1244 SM00271 DnaJ molecular chaperone homology domain BT_1251 SM00347 helix_turn_helix multiple antibiotic resistance protein BT_1257 SM00506 Appr-1"-p processing enzyme BT_1264 SM00387 Histidine kinase-like ATPases BT_1264 SM00388 His Kinase A (phosphoacceptor) domain BT_1264 SM00448 cheY-homologous receiver domain BT_1265 SM00448 cheY-homologous receiver domain BT_1265 SM00850 LytTr DNA-binding domain BT_1272 SM00345 helix_turn_helix gluconate operon transcriptional repressor BT_1274 SM01007 Class II Aldolase and Adducin N-terminal domain BT_1280 SM00965 Secretin and TonB N terminus short domain BT_1286 SM00342 helix_turn_helix, arabinose operon control protein BT_1286 SM00448 cheY-homologous receiver domain BT_1291 SM00382 ATPases associated with a variety of cellular activities BT_1304 SM00345 helix_turn_helix gluconate operon transcriptional repressor BT_1306 SM00382 ATPases associated with a variety of cellular activities BT_1312 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BT_1313 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BT_1319 SM00448 cheY-homologous receiver domain BT_1319 SM00850 LytTr DNA-binding domain BT_1321 SM00382 ATPases associated with a variety of cellular activities BT_1326 SM00028 Tetratricopeptide repeats BT_1334 SM00670 Large family of predicted nucleotide-binding domains BT_1341 SM00984 UDP binding domain BT_1346 SM00854 Bacterial capsule synthesis protein PGA_cap BT_1359 SM00028 Tetratricopeptide repeats BT_1360 SM00967 RNA 2'-O ribose methyltransferase substrate binding BT_1363 SM00479 BT_1363 BT_1364 SM00480 DNA polymerase III beta subunit BT_1367 SM00849 Metallo-beta-lactamase superfamily BT_1376 SM00382 ATPases associated with a variety of cellular activities BT_1385 SM00342 helix_turn_helix, arabinose operon control protein BT_1396 SM00342 helix_turn_helix, arabinose operon control protein BT_1403 SM00861 Transketolase, pyrimidine binding domain BT_1404 SM00342 helix_turn_helix, arabinose operon control protein BT_1410 SM00849 Metallo-beta-lactamase superfamily BT_1413 SM00419 helix_turn_helix, cAMP Regulatory protein BT_1423 SM01022 BT_1423 BT_1430 SM00342 helix_turn_helix, arabinose operon control protein BT_1431 SM00479 BT_1431 BT_1434 SM00354 helix_turn _helix lactose operon repressor BT_1442 SM00729 Elongator protein 3, MiaB family, Radical SAM BT_1442 SM00876 Biotin and Thiamin Synthesis associated domain BT_1447 SM00091 PAS domain BT_1447 SM00387 Histidine kinase-like ATPases BT_1447 SM00388 His Kinase A (phosphoacceptor) domain BT_1447 SM00448 cheY-homologous receiver domain BT_1449 SM00878 Biotin carboxylase C-terminal domain BT_1457 SM00448 cheY-homologous receiver domain BT_1457 SM00850 LytTr DNA-binding domain BT_1463 SM01266 BT_1463 BT_1466 SM00382 ATPases associated with a variety of cellular activities BT_1469 SM00382 ATPases associated with a variety of cellular activities BT_1469 SM00448 cheY-homologous receiver domain BT_1470 SM00387 Histidine kinase-like ATPases BT_1479 SM00382 ATPases associated with a variety of cellular activities BT_1482 SM00448 cheY-homologous receiver domain BT_1482 SM00862 Transcriptional regulatory protein, C terminal BT_1483 SM00387 Histidine kinase-like ATPases BT_1483 SM00388 His Kinase A (phosphoacceptor) domain BT_1496 SM01091 Transporter associated domain BT_1498 SM00478 endonuclease III BT_1499 SM00411 bacterial (prokaryotic) histone like domain BT_1500 SM00316 Ribosomal protein S1-like RNA-binding domain BT_1528 SM00091 PAS domain BT_1528 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BT_1528 SM00387 Histidine kinase-like ATPases BT_1529 SM00382 ATPases associated with a variety of cellular activities BT_1529 SM00448 cheY-homologous receiver domain BT_1531 SM00387 Histidine kinase-like ATPases BT_1531 SM00388 His Kinase A (phosphoacceptor) domain BT_1535 SM00382 ATPases associated with a variety of cellular activities BT_1538 SM00047 Lysozyme subfamily 2 BT_1538 SM00257 Lysin motif BT_1540 SM00342 helix_turn_helix, arabinose operon control protein BT_1543 SM00382 ATPases associated with a variety of cellular activities BT_1554 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BT_1554 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BT_1578 SM00849 Metallo-beta-lactamase superfamily BT_1592 SM00899 BT_1592 BT_1593 SM00977 TilS substrate C-terminal domain BT_1595 SM00357 Cold shock protein domain BT_1595 SM00382 ATPases associated with a variety of cellular activities BT_1595 SM00959 Rho termination factor, N-terminal domain BT_1597 SM00387 Histidine kinase-like ATPases BT_1597 SM00388 His Kinase A (phosphoacceptor) domain BT_1598 SM00028 Tetratricopeptide repeats BT_1598 SM00388 His Kinase A (phosphoacceptor) domain BT_1601 SM00382 ATPases associated with a variety of cellular activities BT_1601 SM00962 SRP54-type protein, GTPase domain BT_1601 SM00963 SRP54-type protein, helical bundle domain BT_1606 SM01235 BT_1606 BT_1608 SM00854 Bacterial capsule synthesis protein PGA_cap BT_1610 SM00382 ATPases associated with a variety of cellular activities BT_1613 SM00935 Outer membrane protein (OmpH-like) BT_1619 SM00965 Secretin and TonB N terminus short domain BT_1625 SM00812 Alpha-L-fucosidase BT_1626 SM01038 Beta galactosidase small chain BT_1632 SM00636 BT_1632 BT_1635 SM00342 helix_turn_helix, arabinose operon control protein BT_1635 SM00387 Histidine kinase-like ATPases BT_1635 SM00388 His Kinase A (phosphoacceptor) domain BT_1635 SM00448 cheY-homologous receiver domain BT_1641 SM00644 BT_1641 BT_1641 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BT_1656 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BT_1659 SM01133 BT_1659 BT_1660 SM00855 Phosphoglycerate mutase family BT_1661 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BT_1661 SM00387 Histidine kinase-like ATPases BT_1661 SM00388 His Kinase A (phosphoacceptor) domain BT_1662 SM00382 ATPases associated with a variety of cellular activities BT_1663 SM00642 Alpha-amylase domain BT_1671 SM00478 endonuclease III BT_1675 SM00028 Tetratricopeptide repeats BT_1681 SM00947 Carbonic anhydrase BT_1690 SM00028 Tetratricopeptide repeats BT_1706 SM00644 BT_1706 BT_1706 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BT_1714 SM00858 BT_1714 BT_1725 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BT_1733 SM01211 BT_1733 BT_1734 SM00342 helix_turn_helix, arabinose operon control protein BT_1734 SM00387 Histidine kinase-like ATPases BT_1734 SM00388 His Kinase A (phosphoacceptor) domain BT_1734 SM00448 cheY-homologous receiver domain BT_1738 SM00387 Histidine kinase-like ATPases BT_1738 SM00388 His Kinase A (phosphoacceptor) domain BT_1747 SM00890 Domain of unknown function BT_1751 SM00382 ATPases associated with a variety of cellular activities BT_1754 SM00342 helix_turn_helix, arabinose operon control protein BT_1754 SM00387 Histidine kinase-like ATPases BT_1754 SM00388 His Kinase A (phosphoacceptor) domain BT_1754 SM00448 cheY-homologous receiver domain BT_1759 SM00640 Glycosyl hydrolases family 32 BT_1760 SM00640 Glycosyl hydrolases family 32 BT_1765 SM00640 Glycosyl hydrolases family 32 BT_1778 SM00758 BT_1778 BT_1778 SM01217 BT_1778 BT_1780 SM01217 BT_1780 BT_1794 SM00448 cheY-homologous receiver domain BT_1794 SM00850 LytTr DNA-binding domain BT_1797 SM00342 helix_turn_helix, arabinose operon control protein BT_1800 SM00387 Histidine kinase-like ATPases BT_1800 SM00388 His Kinase A (phosphoacceptor) domain BT_1801 SM00388 His Kinase A (phosphoacceptor) domain BT_1802 SM00387 Histidine kinase-like ATPases BT_1802 SM00388 His Kinase A (phosphoacceptor) domain BT_1804 SM00893 Electron transfer flavoprotein domain BT_1805 SM00893 Electron transfer flavoprotein domain BT_1810 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BT_1812 SM00271 DnaJ molecular chaperone homology domain BT_1830 SM00883 Chaperonin 10 Kd subunit BT_1833 SM00387 Histidine kinase-like ATPases BT_1833 SM00388 His Kinase A (phosphoacceptor) domain BT_1835 SM00729 Elongator protein 3, MiaB family, Radical SAM BT_1835 SM00876 Biotin and Thiamin Synthesis associated domain BT_1836 SM00876 Biotin and Thiamin Synthesis associated domain BT_1842 SM00812 Alpha-L-fucosidase BT_1843 SM00788 Adenylosuccinate synthetase BT_1847 SM00342 helix_turn_helix, arabinose operon control protein BT_1848 SM00341 Helicase and RNase D C-terminal BT_1848 SM00487 DEAD-like helicases superfamily BT_1848 SM00490 helicase superfamily c-terminal domain BT_1848 SM00956 BT_1848 BT_1851 SM00028 Tetratricopeptide repeats BT_1854 SM00014 Acid phosphatase homologues BT_1857 SM01329 BT_1857 BT_1858 SM00917 LeuA allosteric (dimerisation) domain BT_1861 SM00917 LeuA allosteric (dimerisation) domain BT_1872 SM01217 BT_1872 BT_1884 SM00357 Cold shock protein domain BT_1885 SM00487 DEAD-like helicases superfamily BT_1885 SM00490 helicase superfamily c-terminal domain BT_1887 SM00360 RNA recognition motif BT_1888 SM00421 helix_turn_helix, Lux Regulon BT_1894 SM00028 Tetratricopeptide repeats BT_1904 SM00342 helix_turn_helix, arabinose operon control protein BT_1904 SM00871 Bacterial transcription activator, effector binding domain BT_1906 SM00342 helix_turn_helix, arabinose operon control protein BT_1915 SM00878 Biotin carboxylase C-terminal domain BT_1924 SM00849 Metallo-beta-lactamase superfamily BT_1950 SM00382 ATPases associated with a variety of cellular activities BT_1968 SM00342 helix_turn_helix, arabinose operon control protein BT_1969 SM00919 Malic enzyme, NAD binding domain BT_1969 SM01274 BT_1969 BT_1970 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BT_1971 SM01060 BT_1971 BT_1973 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BT_1975 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BT_1978 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BT_1984 SM00530 Helix-turn-helix XRE-family like proteins BT_2009 SM00072 Guanylate kinase homologues. BT_2023 SM00387 Histidine kinase-like ATPases BT_2023 SM00388 His Kinase A (phosphoacceptor) domain BT_2027 SM00644 BT_2027 BT_2027 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BT_2034 SM00448 cheY-homologous receiver domain BT_2035 SM00382 ATPases associated with a variety of cellular activities BT_2046 SM00155 Phospholipase D. Active site motifs. BT_2049 SM00344 helix_turn_helix ASNC type BT_2071 SM01329 BT_2071 BT_2089 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BT_2089 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BT_2089 SM00493 BT_2089 BT_2096 SM00345 helix_turn_helix gluconate operon transcriptional repressor BT_2100 SM00382 ATPases associated with a variety of cellular activities BT_2103 SM00345 helix_turn_helix gluconate operon transcriptional repressor BT_2103 SM00866 BT_2103 BT_2120 SM00342 helix_turn_helix, arabinose operon control protein BT_2130 SM00986 Uracil DNA glycosylase superfamily BT_2130 SM00987 UreE urease accessory protein, C-terminal domain BT_2141 SM00646 BT_2141 BT_2143 SM00382 ATPases associated with a variety of cellular activities BT_2143 SM00760 Bacterial dnaA protein helix-turn-helix domain BT_2146 SM01065 Starch binding domain BT_2149 SM00905 Dihydroneopterin aldolase BT_2150 SM00851 MGS-like domain BT_2153 SM00729 Elongator protein 3, MiaB family, Radical SAM BT_2164 SM00347 helix_turn_helix multiple antibiotic resistance protein BT_2165 SM00448 cheY-homologous receiver domain BT_2165 SM00862 Transcriptional regulatory protein, C terminal BT_2166 SM00387 Histidine kinase-like ATPases BT_2166 SM00388 His Kinase A (phosphoacceptor) domain BT_2167 SM00838 Elongation factor G C-terminus BT_2167 SM00889 Elongation factor G, domain IV BT_2168 SM00729 Elongator protein 3, MiaB family, Radical SAM BT_2172 SM00965 Secretin and TonB N terminus short domain BT_2174 SM00382 ATPases associated with a variety of cellular activities BT_2181 SM00421 helix_turn_helix, Lux Regulon BT_2190 SM01038 Beta galactosidase small chain BT_2192 SM00812 Alpha-L-fucosidase BT_2212 SM00382 ATPases associated with a variety of cellular activities BT_2223 SM00028 Tetratricopeptide repeats BT_2226 SM00342 helix_turn_helix, arabinose operon control protein BT_2230 SM00481 DNA polymerase alpha chain like domain BT_2239 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BT_2239 SM00245 tail specific protease BT_2240 SM00028 Tetratricopeptide repeats BT_2243 SM00028 Tetratricopeptide repeats BT_2308 SM00342 helix_turn_helix, arabinose operon control protein BT_2320 SM00342 helix_turn_helix, arabinose operon control protein BT_2324 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BT_2324 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BT_2324 SM00493 BT_2324 BT_2326 SM00490 helicase superfamily c-terminal domain BT_2356 SM00342 helix_turn_helix, arabinose operon control protein BT_2359 SM01232 BT_2359 BT_2360 SM00530 Helix-turn-helix XRE-family like proteins BT_2361 SM00530 Helix-turn-helix XRE-family like proteins BT_2372 SM00342 helix_turn_helix, arabinose operon control protein BT_2372 SM00871 Bacterial transcription activator, effector binding domain BT_2382 SM00155 Phospholipase D. Active site motifs. BT_2386 SM00344 helix_turn_helix ASNC type BT_2391 SM00342 helix_turn_helix, arabinose operon control protein BT_2391 SM00387 Histidine kinase-like ATPases BT_2391 SM00388 His Kinase A (phosphoacceptor) domain BT_2391 SM00448 cheY-homologous receiver domain BT_2404 SM00870 BT_2404 BT_2406 SM00382 ATPases associated with a variety of cellular activities BT_2408 SM00421 helix_turn_helix, Lux Regulon BT_2420 SM00091 PAS domain BT_2420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BT_2420 SM00387 Histidine kinase-like ATPases BT_2420 SM00388 His Kinase A (phosphoacceptor) domain BT_2433 SM00382 ATPases associated with a variety of cellular activities BT_2433 SM00448 cheY-homologous receiver domain BT_2434 SM00450 Rhodanese Homology Domain BT_2435 SM00347 helix_turn_helix multiple antibiotic resistance protein BT_2461 SM00965 Secretin and TonB N terminus short domain BT_2494 SM00382 ATPases associated with a variety of cellular activities BT_2518 SM01001 AIR carboxylase BT_2522 SM01011 Aminopeptidase P, N-terminal domain BT_2529 SM00481 DNA polymerase alpha chain like domain BT_2540 SM00387 Histidine kinase-like ATPases BT_2540 SM00388 His Kinase A (phosphoacceptor) domain BT_2541 SM00831 Cation transporter/ATPase, N-terminus BT_2543 SM00904 Riboflavin kinase BT_2546 SM00530 Helix-turn-helix XRE-family like proteins BT_2554 SM00530 Helix-turn-helix XRE-family like proteins BT_2560 SM00965 Secretin and TonB N terminus short domain BT_2563 SM00316 Ribosomal protein S1-like RNA-binding domain BT_2563 SM00322 K homology RNA-binding domain BT_2574 SM00387 Histidine kinase-like ATPases BT_2574 SM00388 His Kinase A (phosphoacceptor) domain BT_2602 SM00507 HNH nucleases BT_2618 SM00382 ATPases associated with a variety of cellular activities BT_2618 SM00448 cheY-homologous receiver domain BT_2619 SM00387 Histidine kinase-like ATPases BT_2619 SM00388 His Kinase A (phosphoacceptor) domain BT_2619 SM00448 cheY-homologous receiver domain BT_2628 SM00342 helix_turn_helix, arabinose operon control protein BT_2628 SM00387 Histidine kinase-like ATPases BT_2628 SM00388 His Kinase A (phosphoacceptor) domain BT_2628 SM00448 cheY-homologous receiver domain BT_2632 SM01149 BT_2632 BT_2644 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BT_2644 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BT_2644 SM00493 BT_2644 BT_2663 SM00028 Tetratricopeptide repeats BT_2693 SM01221 BT_2693 BT_2693 SM01222 BT_2693 BT_2697 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BT_2697 SM00534 ATPase domain of DNA mismatch repair MUTS family BT_2701 SM00662 RNA polymerases D BT_2702 SM00363 S4 RNA-binding domain BT_2702 SM01390 BT_2702 BT_2705 SM00316 Ribosomal protein S1-like RNA-binding domain BT_2716 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BT_2717 SM01374 BT_2717 BT_2721 SM00322 K homology RNA-binding domain BT_2724 SM01382 BT_2724 BT_2724 SM01383 BT_2724 BT_2728 SM01403 BT_2728 BT_2729 SM00838 Elongation factor G C-terminus BT_2729 SM00889 Elongation factor G, domain IV BT_2733 SM00663 RNA polymerase I subunit A N-terminus BT_2738 SM00649 Ribosomal protein L11/L12 BT_2739 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BT_2739 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BT_2749 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BT_2750 SM00226 Low molecular weight phosphatase family BT_2752 SM00487 DEAD-like helicases superfamily BT_2752 SM00490 helicase superfamily c-terminal domain BT_2754 SM00860 SMI1 / KNR4 family BT_2757 SM00870 BT_2757 BT_2769 SM00220 Serine/Threonine protein kinases, catalytic domain BT_2770 SM00240 Forkhead associated domain BT_2771 SM00220 Serine/Threonine protein kinases, catalytic domain BT_2771 SM00240 Forkhead associated domain BT_2772 SM00331 Sigma factor PP2C-like phosphatases BT_2772 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BT_2773 SM00240 Forkhead associated domain BT_2774 SM00240 Forkhead associated domain BT_2783 SM00530 Helix-turn-helix XRE-family like proteins BT_2786 SM01387 BT_2786 BT_2787 SM00838 Elongation factor G C-terminus BT_2792 SM00342 helix_turn_helix, arabinose operon control protein BT_2797 SM00996 S-adenosyl-L-homocysteine hydrolase BT_2797 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BT_2798 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BT_2798 SM00245 tail specific protease BT_2814 SM01130 BT_2814 BT_2816 SM00028 Tetratricopeptide repeats BT_2816 SM00671 Sel1-like repeats. BT_2825 SM00636 BT_2825 BT_2826 SM00342 helix_turn_helix, arabinose operon control protein BT_2826 SM00387 Histidine kinase-like ATPases BT_2826 SM00388 His Kinase A (phosphoacceptor) domain BT_2826 SM00448 cheY-homologous receiver domain BT_2827 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BT_2827 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BT_2827 SM00493 BT_2827 BT_2829 SM00836 DALR anticodon binding domain BT_2829 SM01016 Arginyl tRNA synthetase N terminal dom BT_2830 SM00411 bacterial (prokaryotic) histone like domain BT_2846 SM00382 ATPases associated with a variety of cellular activities BT_2850 SM00387 Histidine kinase-like ATPases BT_2854 SM01217 BT_2854 BT_2860 SM00342 helix_turn_helix, arabinose operon control protein BT_2860 SM00387 Histidine kinase-like ATPases BT_2860 SM00388 His Kinase A (phosphoacceptor) domain BT_2860 SM00448 cheY-homologous receiver domain BT_2886 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BT_2889 SM00342 helix_turn_helix, arabinose operon control protein BT_2897 SM00342 helix_turn_helix, arabinose operon control protein BT_2897 SM00387 Histidine kinase-like ATPases BT_2897 SM00388 His Kinase A (phosphoacceptor) domain BT_2897 SM00448 cheY-homologous receiver domain BT_2910 SM00342 helix_turn_helix, arabinose operon control protein BT_2923 SM00342 helix_turn_helix, arabinose operon control protein BT_2923 SM00387 Histidine kinase-like ATPases BT_2923 SM00388 His Kinase A (phosphoacceptor) domain BT_2923 SM00448 cheY-homologous receiver domain BT_2924 SM00881 CoA binding domain BT_2939 SM00342 helix_turn_helix, arabinose operon control protein BT_2945 SM00984 UDP binding domain BT_2948 SM00758 BT_2948 BT_2950 SM00560 LamG-like jellyroll fold domain BT_2957 SM00342 helix_turn_helix, arabinose operon control protein BT_2970 SM00812 Alpha-L-fucosidase BT_2971 SM00342 helix_turn_helix, arabinose operon control protein BT_2971 SM00387 Histidine kinase-like ATPases BT_2971 SM00388 His Kinase A (phosphoacceptor) domain BT_2971 SM00448 cheY-homologous receiver domain BT_2973 SM00342 helix_turn_helix, arabinose operon control protein BT_2978 SM00344 helix_turn_helix ASNC type BT_3000 SM00974 BT_3000 BT_3002 SM00530 Helix-turn-helix XRE-family like proteins BT_3009 SM00758 BT_3009 BT_3009 SM01217 BT_3009 BT_3014 SM00060 Fibronectin type 3 domain BT_3015 SM01276 BT_3015 BT_3027 SM00635 Bacterial Ig-like domain 2 BT_3030 SM00564 beta-propeller repeat BT_3033 SM00387 Histidine kinase-like ATPases BT_3033 SM00433 TopoisomeraseII BT_3035 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BT_3035 SM00245 tail specific protease BT_3049 SM00342 helix_turn_helix, arabinose operon control protein BT_3049 SM00387 Histidine kinase-like ATPases BT_3049 SM00388 His Kinase A (phosphoacceptor) domain BT_3049 SM00448 cheY-homologous receiver domain BT_3050 SM00636 BT_3050 BT_3052 SM00342 helix_turn_helix, arabinose operon control protein BT_3058 SM00342 helix_turn_helix, arabinose operon control protein BT_3077 SM00316 Ribosomal protein S1-like RNA-binding domain BT_3077 SM00955 BT_3077 BT_3082 SM00640 Glycosyl hydrolases family 32 BT_3097 SM00342 helix_turn_helix, arabinose operon control protein BT_3097 SM00387 Histidine kinase-like ATPases BT_3097 SM00388 His Kinase A (phosphoacceptor) domain BT_3097 SM00448 cheY-homologous receiver domain BT_3114 SM00758 BT_3114 BT_3119 SM01059 Chloramphenicol acetyltransferase BT_3121 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BT_3121 SM00534 ATPase domain of DNA mismatch repair MUTS family BT_3122 SM00342 helix_turn_helix, arabinose operon control protein BT_3134 SM00342 helix_turn_helix, arabinose operon control protein BT_3134 SM00387 Histidine kinase-like ATPases BT_3134 SM00388 His Kinase A (phosphoacceptor) domain BT_3134 SM00448 cheY-homologous receiver domain BT_3150 SM00342 helix_turn_helix, arabinose operon control protein BT_3153 SM00530 Helix-turn-helix XRE-family like proteins BT_3160 SM00710 Parallel beta-helix repeats BT_3169 SM00060 Fibronectin type 3 domain BT_3172 SM00342 helix_turn_helix, arabinose operon control protein BT_3172 SM00387 Histidine kinase-like ATPases BT_3172 SM00388 His Kinase A (phosphoacceptor) domain BT_3172 SM00448 cheY-homologous receiver domain BT_3179 SM01038 Beta galactosidase small chain BT_3195 SM00729 Elongator protein 3, MiaB family, Radical SAM BT_3200 SM00644 BT_3200 BT_3220 SM00028 Tetratricopeptide repeats BT_3228 SM01234 BT_3228 BT_3248 SM00382 ATPases associated with a variety of cellular activities BT_3253 SM01209 BT_3253 BT_3253 SM01210 BT_3253 BT_3255 SM00981 BT_3255 BT_3257 SM00028 Tetratricopeptide repeats BT_3257 SM00387 Histidine kinase-like ATPases BT_3258 SM00448 cheY-homologous receiver domain BT_3258 SM00850 LytTr DNA-binding domain BT_3260 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BT_3260 SM00474 3'-5' exonuclease BT_3260 SM00475 5'-3' exonuclease BT_3260 SM00482 DNA polymerase A domain BT_3263 SM01133 BT_3263 BT_3266 SM00465 GIY-YIG type nucleases (URI domain) BT_3268 SM01228 BT_3268 BT_3271 SM00965 Secretin and TonB N terminus short domain BT_3277 SM00421 helix_turn_helix, Lux Regulon BT_3279 SM00965 Secretin and TonB N terminus short domain BT_3285 SM00382 ATPases associated with a variety of cellular activities BT_3293 SM01038 Beta galactosidase small chain BT_3300 SM00758 BT_3300 BT_3300 SM01217 BT_3300 BT_3302 SM00342 helix_turn_helix, arabinose operon control protein BT_3302 SM00387 Histidine kinase-like ATPases BT_3302 SM00388 His Kinase A (phosphoacceptor) domain BT_3302 SM00448 cheY-homologous receiver domain BT_3303 SM00487 DEAD-like helicases superfamily BT_3303 SM00490 helicase superfamily c-terminal domain BT_3314 SM01217 BT_3314 BT_3334 SM00342 helix_turn_helix, arabinose operon control protein BT_3334 SM00387 Histidine kinase-like ATPases BT_3334 SM00388 His Kinase A (phosphoacceptor) domain BT_3334 SM00448 cheY-homologous receiver domain BT_3340 SM01038 Beta galactosidase small chain BT_3351 SM00840 BT_3351 BT_3353 SM00487 DEAD-like helicases superfamily BT_3353 SM00490 helicase superfamily c-terminal domain BT_3357 SM00358 Double-stranded RNA binding motif BT_3357 SM00535 Ribonuclease III family BT_3358 SM00825 Beta-ketoacyl synthase BT_3359 SM00823 Phosphopantetheine attachment site BT_3363 SM00672 Putative lipopolysaccharide-modifying enzyme. BT_3386 SM00382 ATPases associated with a variety of cellular activities BT_3401 SM00671 Sel1-like repeats. BT_3407 SM00382 ATPases associated with a variety of cellular activities BT_3429 SM00387 Histidine kinase-like ATPases BT_3429 SM00433 TopoisomeraseII BT_3442 SM00028 Tetratricopeptide repeats BT_3444 SM00864 Tubulin/FtsZ family, GTPase domain BT_3444 SM00865 Tubulin/FtsZ family, C-terminal domain BT_3445 SM00842 Cell division protein FtsA BT_3453 SM00740 BT_3453 BT_3460 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BT_3462 SM00028 Tetratricopeptide repeats BT_3465 SM00342 helix_turn_helix, arabinose operon control protein BT_3465 SM00387 Histidine kinase-like ATPases BT_3465 SM00388 His Kinase A (phosphoacceptor) domain BT_3465 SM00448 cheY-homologous receiver domain BT_3519 SM00965 Secretin and TonB N terminus short domain BT_3528 SM01149 BT_3528 BT_3552 SM00937 BT_3552 BT_3554 SM01118 BT_3554 BT_3556 SM00530 Helix-turn-helix XRE-family like proteins BT_3558 SM00477 DNA/RNA non-specific endonuclease BT_3558 SM00892 DNA/RNA non-specific endonuclease BT_3563 SM00477 DNA/RNA non-specific endonuclease BT_3563 SM00892 DNA/RNA non-specific endonuclease BT_3567 SM01217 BT_3567 BT_3570 SM00028 Tetratricopeptide repeats BT_3577 SM00245 tail specific protease BT_3579 SM00434 DNA Topoisomerase IV BT_3592 SM00776 BT_3592 BT_3594 SM00060 Fibronectin type 3 domain BT_3609 SM00342 helix_turn_helix, arabinose operon control protein BT_3613 SM00354 helix_turn _helix lactose operon repressor BT_3627 SM00382 ATPases associated with a variety of cellular activities BT_3636 SM00859 Semialdehyde dehydrogenase, NAD binding domain BT_3640 SM00382 ATPases associated with a variety of cellular activities BT_3645 SM00028 Tetratricopeptide repeats BT_3645 SM00387 Histidine kinase-like ATPases BT_3645 SM00388 His Kinase A (phosphoacceptor) domain BT_3657 SM00813 Alpha-L-arabinofuranosidase C-terminus BT_3660 SM00342 helix_turn_helix, arabinose operon control protein BT_3665 SM00812 Alpha-L-fucosidase BT_3667 SM00342 helix_turn_helix, arabinose operon control protein BT_3678 SM00342 helix_turn_helix, arabinose operon control protein BT_3678 SM00387 Histidine kinase-like ATPases BT_3678 SM00388 His Kinase A (phosphoacceptor) domain BT_3678 SM00448 cheY-homologous receiver domain BT_3698 SM00642 Alpha-amylase domain BT_3704 SM00642 Alpha-amylase domain BT_3708 SM00098 Alkaline phosphatase homologues BT_3709 SM00841 Elongation factor P, C-terminal BT_3709 SM01185 BT_3709 BT_3711 SM00740 BT_3711 BT_3712 SM00363 S4 RNA-binding domain BT_3716 SM00450 Rhodanese Homology Domain BT_3723 SM00935 Outer membrane protein (OmpH-like) BT_3724 SM00935 Outer membrane protein (OmpH-like) BT_3738 SM00342 helix_turn_helix, arabinose operon control protein BT_3738 SM00387 Histidine kinase-like ATPases BT_3738 SM00388 His Kinase A (phosphoacceptor) domain BT_3738 SM00448 cheY-homologous receiver domain BT_3750 SM00965 Secretin and TonB N terminus short domain BT_3756 SM00530 Helix-turn-helix XRE-family like proteins BT_3759 SM00859 Semialdehyde dehydrogenase, NAD binding domain BT_3766 SM01007 Class II Aldolase and Adducin N-terminal domain BT_3768 SM00342 helix_turn_helix, arabinose operon control protein BT_3771 SM00822 BT_3771 BT_3774 SM00872 Alpha mannosidase, middle domain BT_3781 SM01149 BT_3781 BT_3786 SM00342 helix_turn_helix, arabinose operon control protein BT_3786 SM00387 Histidine kinase-like ATPases BT_3786 SM00388 His Kinase A (phosphoacceptor) domain BT_3786 SM00448 cheY-homologous receiver domain BT_3798 SM00812 Alpha-L-fucosidase BT_3800 SM00342 helix_turn_helix, arabinose operon control protein BT_3800 SM00387 Histidine kinase-like ATPases BT_3800 SM00388 His Kinase A (phosphoacceptor) domain BT_3800 SM00448 cheY-homologous receiver domain BT_3801 SM00382 ATPases associated with a variety of cellular activities BT_3801 SM00448 cheY-homologous receiver domain BT_3805 SM00387 Histidine kinase-like ATPases BT_3805 SM00388 His Kinase A (phosphoacceptor) domain BT_3805 SM00448 cheY-homologous receiver domain BT_3809 SM00382 ATPases associated with a variety of cellular activities BT_3812 SM00798 AICARFT/IMPCHase bienzyme BT_3812 SM00851 MGS-like domain BT_3837 SM00382 ATPases associated with a variety of cellular activities BT_3839 SM00382 ATPases associated with a variety of cellular activities BT_3840 SM00360 RNA recognition motif BT_3843 SM00382 ATPases associated with a variety of cellular activities BT_3843 SM00994 ClpX C4-type zinc finger BT_3843 SM01086 C-terminal, D2-small domain, of ClpB protein BT_3844 SM00341 Helicase and RNase D C-terminal BT_3844 SM00487 DEAD-like helicases superfamily BT_3844 SM00490 helicase superfamily c-terminal domain BT_3844 SM00956 BT_3844 BT_3845 SM00116 Domain in cystathionine beta-synthase and other proteins. BT_3845 SM01240 BT_3845 BT_3851 SM00853 MutL C terminal dimerisation domain BT_3851 SM01340 BT_3851 BT_3866 SM00851 MGS-like domain BT_3866 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BT_3872 SM00363 S4 RNA-binding domain BT_3882 SM00881 CoA binding domain BT_3910 SM00327 von Willebrand factor (vWF) type A domain BT_3924 SM00487 DEAD-like helicases superfamily BT_3924 SM00490 helicase superfamily c-terminal domain BT_3925 SM00562 BT_3925 BT_3926 SM00257 Lysin motif BT_3932 SM00400 zinc finger BT_3932 SM00493 BT_3932 BT_3934 SM00830 Chorismate mutase type II BT_3937 SM00028 Tetratricopeptide repeats BT_3938 SM00487 DEAD-like helicases superfamily BT_3938 SM00490 helicase superfamily c-terminal domain BT_3944 SM00116 Domain in cystathionine beta-synthase and other proteins. BT_3951 SM00342 helix_turn_helix, arabinose operon control protein BT_3956 SM00812 Alpha-L-fucosidase BT_3957 SM00342 helix_turn_helix, arabinose operon control protein BT_3966 SM00448 cheY-homologous receiver domain BT_3966 SM00850 LytTr DNA-binding domain BT_3974 SM00342 helix_turn_helix, arabinose operon control protein BT_3978 SM00155 Phospholipase D. Active site motifs. BT_3983 SM00965 Secretin and TonB N terminus short domain BT_3995 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BT_3997 SM00422 helix_turn_helix, mercury resistance BT_3998 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BT_3998 SM00954 Region found in RelA / SpoT proteins BT_3999 SM00257 Lysin motif BT_4001 SM00470 ParB-like nuclease domain BT_4007 SM00382 ATPases associated with a variety of cellular activities BT_4013 SM00487 DEAD-like helicases superfamily BT_4031 SM00644 BT_4031 BT_4031 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BT_4035 SM00530 Helix-turn-helix XRE-family like proteins BT_4042 SM00116 Domain in cystathionine beta-synthase and other proteins. BT_4042 SM00924 MgtE intracellular N domain BT_4043 SM00650 Ribosomal RNA adenine dimethylases BT_4047 SM01360 BT_4047 BT_4050 SM01038 Beta galactosidase small chain BT_4052 SM00382 ATPases associated with a variety of cellular activities BT_4054 SM00342 helix_turn_helix, arabinose operon control protein BT_4057 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BT_4057 SM00387 Histidine kinase-like ATPases BT_4057 SM00388 His Kinase A (phosphoacceptor) domain BT_4099 SM00861 Transketolase, pyrimidine binding domain BT_4101 SM01005 Alanine racemase, C-terminal domain BT_4111 SM00342 helix_turn_helix, arabinose operon control protein BT_4111 SM00387 Histidine kinase-like ATPases BT_4111 SM00388 His Kinase A (phosphoacceptor) domain BT_4111 SM00448 cheY-homologous receiver domain BT_4112 SM00060 Fibronectin type 3 domain BT_4118 SM00850 LytTr DNA-binding domain BT_4123 SM00710 Parallel beta-helix repeats BT_4124 SM00342 helix_turn_helix, arabinose operon control protein BT_4124 SM00387 Histidine kinase-like ATPases BT_4124 SM00388 His Kinase A (phosphoacceptor) domain BT_4124 SM00448 cheY-homologous receiver domain BT_4125 SM00729 Elongator protein 3, MiaB family, Radical SAM BT_4126 SM00849 Metallo-beta-lactamase superfamily BT_4130 SM00028 Tetratricopeptide repeats BT_4130 SM00382 ATPases associated with a variety of cellular activities BT_4136 SM00812 Alpha-L-fucosidase BT_4137 SM00342 helix_turn_helix, arabinose operon control protein BT_4137 SM00387 Histidine kinase-like ATPases BT_4137 SM00388 His Kinase A (phosphoacceptor) domain BT_4137 SM00448 cheY-homologous receiver domain BT_4142 SM00342 helix_turn_helix, arabinose operon control protein BT_4142 SM00871 Bacterial transcription activator, effector binding domain BT_4146 SM00710 Parallel beta-helix repeats BT_4149 SM00710 Parallel beta-helix repeats BT_4166 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. BT_4178 SM00342 helix_turn_helix, arabinose operon control protein BT_4178 SM00387 Histidine kinase-like ATPases BT_4178 SM00388 His Kinase A (phosphoacceptor) domain BT_4178 SM00448 cheY-homologous receiver domain BT_4182 SM00342 helix_turn_helix, arabinose operon control protein BT_4182 SM00387 Histidine kinase-like ATPases BT_4182 SM00388 His Kinase A (phosphoacceptor) domain BT_4182 SM00448 cheY-homologous receiver domain BT_4187 SM00710 Parallel beta-helix repeats BT_4192 SM00729 Elongator protein 3, MiaB family, Radical SAM BT_4208 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BT_4209 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BT_4210 SM00937 BT_4210 BT_4220 SM00244 prohibitin homologues BT_4229 SM00420 helix_turn_helix, Deoxyribose operon repressor BT_4236 SM00342 helix_turn_helix, arabinose operon control protein BT_4236 SM00387 Histidine kinase-like ATPases BT_4236 SM00448 cheY-homologous receiver domain BT_4241 SM01038 Beta galactosidase small chain BT_4244 SM01276 BT_4244 BT_4251 SM00710 Parallel beta-helix repeats BT_4259 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BT_4259 SM00245 tail specific protease BT_4263 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BT_4272 SM01276 BT_4272 BT_4288 SM00382 ATPases associated with a variety of cellular activities BT_4318 SM00382 ATPases associated with a variety of cellular activities BT_4331 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BT_4332 SM00474 3'-5' exonuclease BT_4334 SM00843 BT_4334 BT_4338 SM00100 Cyclic nucleotide-monophosphate binding domain BT_4338 SM00419 helix_turn_helix, cAMP Regulatory protein BT_4339 SM01230 BT_4339 BT_4345 SM00316 Ribosomal protein S1-like RNA-binding domain BT_4354 SM00387 Histidine kinase-like ATPases BT_4354 SM00388 His Kinase A (phosphoacceptor) domain BT_4357 SM00965 Secretin and TonB N terminus short domain BT_4362 SM00957 SecA DEAD-like domain BT_4362 SM00958 SecA preprotein cross-linking domain BT_4368 SM00028 Tetratricopeptide repeats BT_4370 SM01091 Transporter associated domain BT_4375 SM00382 ATPases associated with a variety of cellular activities BT_4390 SM00873 B3/4 domain BT_4396 SM00342 helix_turn_helix, arabinose operon control protein BT_4398 SM00028 Tetratricopeptide repeats BT_4404 SM00965 Secretin and TonB N terminus short domain BT_4407 SM00560 LamG-like jellyroll fold domain BT_4412 SM00460 Transglutaminase/protease-like homologues BT_4417 SM00322 K homology RNA-binding domain BT_4417 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BT_4424 SM00829 Enoylreductase BT_4425 SM01133 BT_4425 BT_4443 SM00646 BT_4443 BT_4462 SM00563 Phosphate acyltransferases BT_4465 SM00327 von Willebrand factor (vWF) type A domain BT_4488 SM01232 BT_4488 BT_4509 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BT_4515 SM00530 Helix-turn-helix XRE-family like proteins BT_4517 SM00487 DEAD-like helicases superfamily BT_4529 SM00530 Helix-turn-helix XRE-family like proteins BT_4534 SM00530 Helix-turn-helix XRE-family like proteins BT_4535 SM00487 DEAD-like helicases superfamily BT_4552 SM00387 Histidine kinase-like ATPases BT_4552 SM00388 His Kinase A (phosphoacceptor) domain BT_4552 SM00448 cheY-homologous receiver domain BT_4566 SM00448 cheY-homologous receiver domain BT_4566 SM00850 LytTr DNA-binding domain BT_4572 SM01192 BT_4572 BT_4572 SM01193 BT_4572 BT_4587 SM00363 S4 RNA-binding domain BT_4590 SM00712 DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria. BT_4592 SM01323 BT_4592 BT_4597 SM00382 ATPases associated with a variety of cellular activities BT_4597 SM01086 C-terminal, D2-small domain, of ClpB protein BT_4605 SM00635 Bacterial Ig-like domain 2 BT_4610 SM00382 ATPases associated with a variety of cellular activities BT_4624 SM00857 Resolvase, N terminal domain BT_4628 SM00487 DEAD-like helicases superfamily BT_4628 SM00490 helicase superfamily c-terminal domain BT_4634 SM00965 Secretin and TonB N terminus short domain BT_4645 SM00965 Secretin and TonB N terminus short domain BT_4651 SM00518 AP endonuclease family 2 BT_4663 SM00342 helix_turn_helix, arabinose operon control protein BT_4663 SM00387 Histidine kinase-like ATPases BT_4663 SM00388 His Kinase A (phosphoacceptor) domain BT_4663 SM00448 cheY-homologous receiver domain BT_4673 SM00342 helix_turn_helix, arabinose operon control protein BT_4673 SM00387 Histidine kinase-like ATPases BT_4673 SM00388 His Kinase A (phosphoacceptor) domain BT_4680 SM00463 Small MutS-related domain BT_4680 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BT_4680 SM00534 ATPase domain of DNA mismatch repair MUTS family BT_4689 SM00642 Alpha-amylase domain BT_4690 SM00642 Alpha-amylase domain BT_4697 SM00342 helix_turn_helix, arabinose operon control protein BT_4703 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BT_4707 SM00965 Secretin and TonB N terminus short domain BT_4710 SM00560 LamG-like jellyroll fold domain BT_4713 SM00812 Alpha-L-fucosidase BT_4714 SM01217 BT_4714 BT_4724 SM00965 Secretin and TonB N terminus short domain BT_4726 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BT_4726 SM00564 beta-propeller repeat BT_4733 SM00530 Helix-turn-helix XRE-family like proteins BT_4736 SM00644 BT_4736 BT_4736 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BT_4737 SM00729 Elongator protein 3, MiaB family, Radical SAM BT_4749 SM00487 DEAD-like helicases superfamily