locus-tag	class	description
VIC01_RS00015	COG1454	alcohol dehydrogenase
VIC01_RS00040	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
VIC01_RS00040	COG0758	DNA mediated transformation
VIC01_RS00080	COG1053	succinate dehydrogenase
VIC01_RS00095	COG3409	Peptidoglycan-binding domain 1 protein
VIC01_RS00095	COG0793	Belongs to the peptidase S41A family
VIC01_RS00100	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
VIC01_RS00165	COG0700	Nucleoside recognition
VIC01_RS00170	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
VIC01_RS00180	COG2268	Band 7 protein
VIC01_RS00185	COG0445	tRNA wobble uridine modification
VIC01_RS00190	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
VIC01_RS00200	COG0322	excinuclease ABC activity
VIC01_RS00205	COG1490	D-aminoacyl-tRNA deacylase activity
VIC01_RS00210	COG1694	Mazg nucleotide pyrophosphohydrolase
VIC01_RS00220	COG0142	geranyltranstransferase activity
VIC01_RS00225	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
VIC01_RS00225	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
VIC01_RS00265	COG0358	DNA primase activity
VIC01_RS00285	COG0012	GTP binding
VIC01_RS00295	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
VIC01_RS00365	COG0823	Involved in the tonB-independent uptake of proteins
VIC01_RS00365	COG1506	peptidase
VIC01_RS00365	COG4946	Tricorn protease homolog
VIC01_RS00370	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
VIC01_RS00380	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
VIC01_RS00385	COG0594	ribonuclease P activity
VIC01_RS00405	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
VIC01_RS00410	COG2814	Major facilitator Superfamily
VIC01_RS00455	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
VIC01_RS00460	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
VIC01_RS00465	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
VIC01_RS00470	COG1968	undecaprenyl-diphosphatase activity
VIC01_RS00480	COG2177	Part of the ABC transporter FtsEX involved in
VIC01_RS00490	COG1983	PspC domain protein
VIC01_RS00495	COG0545	Peptidyl-prolyl cis-trans isomerase
VIC01_RS00500	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
VIC01_RS00510	COG0427	acetyl-CoA hydrolase
VIC01_RS00515	COG1472	Belongs to the glycosyl hydrolase 3 family
VIC01_RS00520	COG0488	(ABC) transporter
VIC01_RS00525	COG3119	arylsulfatase activity
VIC01_RS00530	COG3119	arylsulfatase activity
VIC01_RS00540	COG1629	transport
VIC01_RS00540	COG4206	TonB-dependent receptor
VIC01_RS00550	COG1595	DNA-templated transcription, initiation
VIC01_RS00555	COG4946	Tricorn protease homolog
VIC01_RS00555	COG0793	Belongs to the peptidase S41A family
VIC01_RS00560	COG0495	leucyl-tRNA aminoacylation
VIC01_RS00565	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
VIC01_RS00575	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
VIC01_RS00580	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
VIC01_RS00605	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
VIC01_RS00605	COG0731	radical SAM domain protein
VIC01_RS00620	COG0659	secondary active sulfate transmembrane transporter activity
VIC01_RS00630	COG1592	Rubrerythrin
VIC01_RS00635	COG0745	RESPONSE REGULATOR receiver
VIC01_RS00635	COG3292	Two component regulator propeller
VIC01_RS00635	COG2205	protein histidine kinase activity
VIC01_RS00675	COG1629	transport
VIC01_RS00675	COG4206	TonB-dependent receptor
VIC01_RS00690	COG4948	Mandelate Racemase Muconate Lactonizing
VIC01_RS00710	COG4206	TonB-dependent receptor
VIC01_RS00710	COG1629	transport
VIC01_RS00715	COG0702	epimerase
VIC01_RS00745	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
VIC01_RS00775	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
VIC01_RS00780	COG1028	Short-chain dehydrogenase reductase Sdr
VIC01_RS00785	COG4677	pectinesterase activity
VIC01_RS00790	COG0726	polysaccharide deacetylase
VIC01_RS00820	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
VIC01_RS00820	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
VIC01_RS00840	COG1506	peptidase
VIC01_RS00840	COG0823	Involved in the tonB-independent uptake of proteins
VIC01_RS00845	COG0116	Belongs to the methyltransferase superfamily
VIC01_RS00855	COG1045	serine acetyltransferase
VIC01_RS00860	COG0557	exoribonuclease II activity
VIC01_RS00865	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
VIC01_RS00885	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
VIC01_RS00890	COG0826	peptidase U32
VIC01_RS00900	COG1629	transport
VIC01_RS00905	COG0018	arginyl-trna synthetase
VIC01_RS00910	COG3341	Caulimovirus viroplasmin
VIC01_RS00910	COG0328	RNA-DNA hybrid ribonuclease activity
VIC01_RS00920	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
VIC01_RS00930	COG0463	Glycosyl transferase, family 2
VIC01_RS00940	COG1215	transferase activity, transferring glycosyl groups
VIC01_RS00950	COG1132	(ABC) transporter
VIC01_RS00975	COG0438	transferase activity, transferring glycosyl groups
VIC01_RS01005	COG0562	UDP-galactopyranose mutase
VIC01_RS01020	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
VIC01_RS01050	COG1629	transport
VIC01_RS01050	COG4206	TonB-dependent receptor
VIC01_RS01060	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
VIC01_RS01065	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
VIC01_RS01070	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
VIC01_RS01075	COG0571	ribonuclease III activity
VIC01_RS01080	COG3119	arylsulfatase activity
VIC01_RS01095	COG3119	arylsulfatase activity
VIC01_RS01110	COG0745	RESPONSE REGULATOR receiver
VIC01_RS01110	COG2205	protein histidine kinase activity
VIC01_RS01110	COG3292	Two component regulator propeller
VIC01_RS01115	COG0205	6-phosphofructokinase activity
VIC01_RS01140	COG0784	Response regulator, receiver
VIC01_RS01140	COG2205	protein histidine kinase activity
VIC01_RS01195	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
VIC01_RS01240	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
VIC01_RS01265	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
VIC01_RS01275	COG1028	Short-chain dehydrogenase reductase Sdr
VIC01_RS01285	COG0215	cysteine-tRNA ligase activity
VIC01_RS01305	COG4206	TonB-dependent receptor
VIC01_RS01305	COG1629	transport
VIC01_RS01310	COG1082	Xylose isomerase domain protein TIM barrel
VIC01_RS01315	COG3292	Two component regulator propeller
VIC01_RS01315	COG2205	protein histidine kinase activity
VIC01_RS01315	COG0745	RESPONSE REGULATOR receiver
VIC01_RS01320	COG3507	Belongs to the glycosyl hydrolase 43 family
VIC01_RS01335	COG0482	sulfurtransferase activity
VIC01_RS01345	COG3250	beta-galactosidase activity
VIC01_RS01370	COG0339	signal peptide processing
VIC01_RS01375	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VIC01_RS01385	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
VIC01_RS01400	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
VIC01_RS01400	COG0674	pyruvate-flavodoxin oxidoreductase activity
VIC01_RS01405	COG1013	pyruvate-flavodoxin oxidoreductase activity
VIC01_RS01410	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
VIC01_RS01415	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
VIC01_RS01430	COG3292	Two component regulator propeller
VIC01_RS01430	COG0745	RESPONSE REGULATOR receiver
VIC01_RS01430	COG2205	protein histidine kinase activity
VIC01_RS01480	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
VIC01_RS01485	COG1854	S-ribosylhomocysteine lyase activity
VIC01_RS01490	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
VIC01_RS01565	COG0358	DNA primase activity
VIC01_RS01715	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VIC01_RS01715	COG0784	Response regulator, receiver
VIC01_RS01715	COG2198	Histidine kinase
VIC01_RS01715	COG2205	protein histidine kinase activity
VIC01_RS01735	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
VIC01_RS01735	COG0551	DNA topoisomerase type I activity
VIC01_RS01775	COG4974	Belongs to the 'phage' integrase family
VIC01_RS01795	COG0438	transferase activity, transferring glycosyl groups
VIC01_RS01810	COG3475	LICD family
VIC01_RS01820	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
VIC01_RS01840	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VIC01_RS01840	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VIC01_RS01845	COG0606	chelatase, subunit chli
VIC01_RS01860	COG4974	Belongs to the 'phage' integrase family
VIC01_RS01865	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
VIC01_RS01880	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
VIC01_RS01890	COG0351	phosphomethylpyrimidine kinase
VIC01_RS01895	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
VIC01_RS01915	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
VIC01_RS01925	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
VIC01_RS01925	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
VIC01_RS01930	COG2890	protein-(glutamine-N5) methyltransferase activity
VIC01_RS01940	COG1040	competence protein
VIC01_RS01945	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
VIC01_RS01955	COG0165	Argininosuccinate lyase
VIC01_RS01975	COG0519	Catalyzes the synthesis of GMP from XMP
VIC01_RS02010	COG3634	alkyl hydroperoxide reductase activity
VIC01_RS02030	COG0702	epimerase
VIC01_RS02035	COG4771	TonB-dependent receptor
VIC01_RS02045	COG2205	protein histidine kinase activity
VIC01_RS02045	COG0745	RESPONSE REGULATOR receiver
VIC01_RS02045	COG3292	Two component regulator propeller
VIC01_RS02065	COG3537	Alpha-1,2-mannosidase
VIC01_RS02070	COG0584	glycerophosphoryl diester phosphodiesterase
VIC01_RS02075	COG0702	epimerase
VIC01_RS02080	COG1629	transport
VIC01_RS02080	COG4206	TonB-dependent receptor
VIC01_RS02125	COG5002	protein histidine kinase activity
VIC01_RS02130	COG0745	RESPONSE REGULATOR receiver
VIC01_RS02145	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
VIC01_RS02155	COG0828	Belongs to the bacterial ribosomal protein bS21 family
VIC01_RS02160	COG4974	Belongs to the 'phage' integrase family
VIC01_RS02190	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
VIC01_RS02210	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
VIC01_RS02215	COG0081	regulation of translation
VIC01_RS02220	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
VIC01_RS02225	COG0222	ribosome binding
VIC01_RS02230	COG0085	RNA polymerase activity
VIC01_RS02235	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
VIC01_RS02245	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
VIC01_RS02250	COG0049	tRNA binding
VIC01_RS02255	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
VIC01_RS02260	COG0051	transcription antitermination factor activity, RNA binding
VIC01_RS02265	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
VIC01_RS02270	COG0088	Forms part of the polypeptide exit tunnel
VIC01_RS02275	COG0089	rRNA binding
VIC01_RS02280	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
VIC01_RS02285	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
VIC01_RS02290	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
VIC01_RS02295	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
VIC01_RS02300	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
VIC01_RS02305	COG0255	Belongs to the universal ribosomal protein uL29 family
VIC01_RS02310	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
VIC01_RS02315	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
VIC01_RS02320	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
VIC01_RS02325	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
VIC01_RS02330	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
VIC01_RS02335	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
VIC01_RS02340	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
VIC01_RS02345	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
VIC01_RS02350	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
VIC01_RS02355	COG1841	ribosomal large subunit assembly
VIC01_RS02360	COG0200	Binds to the 23S rRNA
VIC01_RS02375	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
VIC01_RS02380	COG0257	Belongs to the bacterial ribosomal protein bL36 family
VIC01_RS02385	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
VIC01_RS02390	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
VIC01_RS02395	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
VIC01_RS02400	COG0202	RNA polymerase activity
VIC01_RS02405	COG0203	ribosomal protein L17
VIC01_RS02440	COG1595	DNA-templated transcription, initiation
VIC01_RS02455	COG2873	o-acetylhomoserine
VIC01_RS02490	COG1629	transport
VIC01_RS02490	COG4206	TonB-dependent receptor
VIC01_RS02520	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
VIC01_RS02520	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
VIC01_RS02540	COG4771	TonB-dependent receptor
VIC01_RS02545	COG0561	phosphatase activity
VIC01_RS02580	COG3345	alpha-galactosidase
VIC01_RS02585	COG2197	response regulator
VIC01_RS02595	COG0534	Mate efflux family protein
VIC01_RS02605	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
VIC01_RS02610	COG0542	response to heat
VIC01_RS02615	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
VIC01_RS02660	COG3537	Alpha-1,2-mannosidase
VIC01_RS02670	COG4771	TonB-dependent receptor
VIC01_RS02695	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
VIC01_RS02700	COG0673	inositol 2-dehydrogenase activity
VIC01_RS02725	COG3250	beta-galactosidase activity
VIC01_RS02730	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
VIC01_RS02735	COG0741	lytic transglycosylase activity
VIC01_RS02735	COG1388	LysM domain
VIC01_RS02745	COG0745	RESPONSE REGULATOR receiver
VIC01_RS02745	COG2205	protein histidine kinase activity
VIC01_RS02745	COG3292	Two component regulator propeller
VIC01_RS02750	COG1629	transport
VIC01_RS02750	COG4206	TonB-dependent receptor
VIC01_RS02755	COG0702	epimerase
VIC01_RS02770	COG0235	Class ii aldolase
VIC01_RS02780	COG4806	L-rhamnose isomerase
VIC01_RS02785	COG1070	Carbohydrate kinase
VIC01_RS02790	COG1438	arginine binding
VIC01_RS02800	COG0137	argininosuccinate synthase activity
VIC01_RS02805	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
VIC01_RS02810	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
VIC01_RS02815	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
VIC01_RS02835	COG4771	TonB-dependent receptor
VIC01_RS02840	COG0702	epimerase
VIC01_RS02860	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
VIC01_RS02870	COG0667	Aldo Keto reductase
VIC01_RS02875	COG0348	domain, Protein
VIC01_RS02885	COG1917	Cupin 2, conserved barrel domain protein
VIC01_RS02885	COG1396	sequence-specific DNA binding
VIC01_RS02890	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
VIC01_RS02905	COG4206	TonB-dependent receptor
VIC01_RS02905	COG1629	transport
VIC01_RS02925	COG4206	TonB-dependent receptor
VIC01_RS02925	COG1629	transport
VIC01_RS02955	COG1629	transport
VIC01_RS02955	COG4206	TonB-dependent receptor
VIC01_RS02965	COG1629	transport
VIC01_RS02965	COG4206	TonB-dependent receptor
VIC01_RS02995	COG0561	phosphatase activity
VIC01_RS03000	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
VIC01_RS03005	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
VIC01_RS03010	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
VIC01_RS03015	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
VIC01_RS03030	COG1181	Belongs to the D-alanine--D-alanine ligase family
VIC01_RS03035	COG0564	pseudouridine synthase activity
VIC01_RS03055	COG3292	Two component regulator propeller
VIC01_RS03055	COG0745	RESPONSE REGULATOR receiver
VIC01_RS03055	COG2205	protein histidine kinase activity
VIC01_RS03060	COG0657	acetylesterase activity
VIC01_RS03060	COG2755	lipolytic protein G-D-S-L family
VIC01_RS03065	COG4771	TonB-dependent receptor
VIC01_RS03070	COG0702	epimerase
VIC01_RS03080	COG3119	arylsulfatase activity
VIC01_RS03085	COG3525	Glycosyl hydrolase, family 20, catalytic domain
VIC01_RS03115	COG0641	radical SAM
VIC01_RS03120	COG0230	Belongs to the bacterial ribosomal protein bL34 family
VIC01_RS03125	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
VIC01_RS03130	COG0463	Glycosyl transferase, family 2
VIC01_RS03130	COG1216	Glycosyl transferase, family 2
VIC01_RS03135	COG2003	Belongs to the UPF0758 family
VIC01_RS03140	COG2151	metal-sulfur cluster biosynthetic enzyme
VIC01_RS03145	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VIC01_RS03150	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
VIC01_RS03155	COG0280	phosphate acetyltransferase
VIC01_RS03165	COG1346	cytolysis
VIC01_RS03180	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
VIC01_RS03185	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
VIC01_RS03190	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
VIC01_RS03210	COG3292	Two component regulator propeller
VIC01_RS03210	COG2205	protein histidine kinase activity
VIC01_RS03210	COG0745	RESPONSE REGULATOR receiver
VIC01_RS03215	COG4206	TonB-dependent receptor
VIC01_RS03215	COG1629	transport
VIC01_RS03225	COG4771	TonB-dependent receptor
VIC01_RS03235	COG3507	Belongs to the glycosyl hydrolase 43 family
VIC01_RS03250	COG0702	epimerase
VIC01_RS03255	COG4771	TonB-dependent receptor
VIC01_RS03260	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
VIC01_RS03275	COG4771	TonB-dependent receptor
VIC01_RS03280	COG0702	epimerase
VIC01_RS03285	COG3408	Glycogen debranching enzyme
VIC01_RS03305	COG4977	sequence-specific DNA binding
VIC01_RS03310	COG4206	TonB-dependent receptor
VIC01_RS03310	COG1629	transport
VIC01_RS03315	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
VIC01_RS03320	COG1501	Belongs to the glycosyl hydrolase 31 family
VIC01_RS03330	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
VIC01_RS03340	COG0420	3'-5' exonuclease activity
VIC01_RS03380	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
VIC01_RS03385	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
VIC01_RS03390	COG0811	peptide transport
VIC01_RS03395	COG0848	biopolymer transport protein
VIC01_RS03410	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
VIC01_RS03415	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
VIC01_RS03420	COG0105	UTP biosynthetic process
VIC01_RS03425	COG0739	heme binding
VIC01_RS03440	COG0149	triose-phosphate isomerase activity
VIC01_RS03450	COG0302	gtp cyclohydrolase
VIC01_RS03455	COG0358	DNA primase activity
VIC01_RS03460	COG0039	L-malate dehydrogenase activity
VIC01_RS03525	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
VIC01_RS03530	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
VIC01_RS03535	COG1160	GTP binding
VIC01_RS03540	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
VIC01_RS03545	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
VIC01_RS03555	COG0724	RNA recognition motif
VIC01_RS03560	COG0544	peptidyl-prolyl cis-trans isomerase activity
VIC01_RS03565	COG0740	serine-type endopeptidase activity
VIC01_RS03570	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
VIC01_RS03590	COG0577	efflux transmembrane transporter activity
VIC01_RS03625	COG2274	protein secretion by the type I secretion system
VIC01_RS03665	COG0516	GMP reductase activity
VIC01_RS03665	COG0517	IMP dehydrogenase activity
VIC01_RS03670	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
VIC01_RS03695	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
VIC01_RS03715	COG0529	Catalyzes the synthesis of activated sulfate
VIC01_RS03720	COG0175	sulfate reduction
VIC01_RS03725	COG2895	sulfate adenylyltransferase (ATP) activity
VIC01_RS03735	COG2885	chlorophyll binding
VIC01_RS03740	COG3022	response to hydroperoxide
VIC01_RS03755	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
VIC01_RS03785	COG2197	response regulator
VIC01_RS03790	COG0482	sulfurtransferase activity
VIC01_RS03820	COG0513	Belongs to the DEAD box helicase family
VIC01_RS03840	COG3250	beta-galactosidase activity
VIC01_RS03850	COG3250	beta-galactosidase activity
VIC01_RS03855	COG0702	epimerase
VIC01_RS03860	COG4771	TonB-dependent receptor
VIC01_RS03885	COG1028	Short-chain dehydrogenase reductase Sdr
VIC01_RS03890	COG0564	pseudouridine synthase activity
VIC01_RS03900	COG2204	response regulator
VIC01_RS03905	COG2205	protein histidine kinase activity
VIC01_RS03905	COG2198	Histidine kinase
VIC01_RS03905	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VIC01_RS03905	COG0784	Response regulator, receiver
VIC01_RS03910	COG0534	Mate efflux family protein
VIC01_RS03920	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
VIC01_RS03965	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
VIC01_RS03965	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
VIC01_RS03970	COG1349	DNA-binding transcription factor activity
VIC01_RS03975	COG3959	Transketolase, thiamine diphosphate binding domain
VIC01_RS03980	COG3958	Transketolase
VIC01_RS04005	COG0124	histidyl-tRNA synthetase
VIC01_RS04010	COG1203	CRISPR-associated helicase, Cas3
VIC01_RS04040	COG1518	maintenance of DNA repeat elements
VIC01_RS04045	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
VIC01_RS04050	COG5433	transposase activity
VIC01_RS04055	COG1160	GTP binding
VIC01_RS04065	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
VIC01_RS04075	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
VIC01_RS04080	COG0459	protein refolding
VIC01_RS04100	COG0288	reversible hydration of carbon dioxide
VIC01_RS04105	COG0673	inositol 2-dehydrogenase activity
VIC01_RS04125	COG0693	protein deglycase activity
VIC01_RS04135	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
VIC01_RS04140	COG2986	histidine ammonia-lyase
VIC01_RS04145	COG3404	Formiminotransferase-cyclodeaminase
VIC01_RS04150	COG1228	amidohydrolase
VIC01_RS04170	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
VIC01_RS04175	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
VIC01_RS04205	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
VIC01_RS04210	COG2086	electron transfer activity
VIC01_RS04225	COG4974	Belongs to the 'phage' integrase family
VIC01_RS04305	COG2207	Transcriptional regulator
VIC01_RS04310	COG2706	6-phosphogluconolactonase activity
VIC01_RS04325	COG4771	TonB-dependent receptor
VIC01_RS04330	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
VIC01_RS04345	COG0667	Aldo Keto reductase
VIC01_RS04395	COG2095	MarC family integral membrane protein
VIC01_RS04405	COG1830	Aldolase
VIC01_RS04410	COG0588	phosphoglycerate mutase activity
VIC01_RS04425	COG0205	6-phosphofructokinase activity
VIC01_RS04430	COG4651	solute:proton antiporter activity
VIC01_RS04430	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
VIC01_RS04435	COG0058	SHG alpha-glucan phosphorylase activity
VIC01_RS04440	COG0010	Belongs to the arginase family
VIC01_RS04490	COG0681	Belongs to the peptidase S26 family
VIC01_RS04515	COG0668	transmembrane transport
VIC01_RS04520	COG2205	protein histidine kinase activity
VIC01_RS04525	COG4206	TonB-dependent receptor
VIC01_RS04525	COG1629	transport
VIC01_RS04535	COG1629	transport
VIC01_RS04545	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
VIC01_RS04545	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
VIC01_RS04550	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
VIC01_RS04555	COG2985	domain, Protein
VIC01_RS04555	COG0569	domain protein
VIC01_RS04560	COG0488	(ABC) transporter
VIC01_RS04575	COG4771	TonB-dependent receptor
VIC01_RS04580	COG0702	epimerase
VIC01_RS04585	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
VIC01_RS04585	COG3408	Glycogen debranching enzyme
VIC01_RS04590	COG3250	beta-galactosidase activity
VIC01_RS04600	COG1629	transport
VIC01_RS04605	COG1088	dTDP-glucose 4,6-dehydratase activity
VIC01_RS04615	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
VIC01_RS04725	COG0534	Mate efflux family protein
VIC01_RS04735	COG1570	exodeoxyribonuclease VII activity
VIC01_RS04740	COG1722	exodeoxyribonuclease VII activity
VIC01_RS04745	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
VIC01_RS04760	COG0489	protein tyrosine kinase activity
VIC01_RS04775	COG3015	lipoprotein NlpE involved in copper resistance
VIC01_RS04790	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VIC01_RS04805	COG0039	L-malate dehydrogenase activity
VIC01_RS04815	COG1475	DNA binding
VIC01_RS04820	COG3969	phosphoadenosine phosphosulfate
VIC01_RS04850	COG3328	transposase activity
VIC01_RS04865	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
VIC01_RS04880	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VIC01_RS04895	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VIC01_RS04900	COG1309	transcriptional regulator
VIC01_RS04950	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VIC01_RS04975	COG1696	Membrane protein involved in D-alanine export
VIC01_RS05030	COG2095	MarC family integral membrane protein
VIC01_RS05035	COG1063	alcohol dehydrogenase
VIC01_RS05040	COG0738	Major facilitator superfamily
VIC01_RS05055	COG2207	Transcriptional regulator
VIC01_RS05065	COG1629	transport
VIC01_RS05070	COG0702	epimerase
VIC01_RS05080	COG1082	Xylose isomerase domain protein TIM barrel
VIC01_RS05085	COG1501	Belongs to the glycosyl hydrolase 31 family
VIC01_RS05110	COG0423	glycine-tRNA ligase activity
VIC01_RS05115	COG0545	Peptidyl-prolyl cis-trans isomerase
VIC01_RS05120	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
VIC01_RS05125	COG0589	response to stress
VIC01_RS05125	COG0475	glutathione-regulated potassium exporter activity
VIC01_RS05130	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
VIC01_RS05135	COG1136	(ABC) transporter
VIC01_RS05145	COG1979	alcohol dehydrogenase
VIC01_RS05150	COG2996	Protein conserved in bacteria
VIC01_RS05170	COG1136	(ABC) transporter
VIC01_RS05170	COG0577	efflux transmembrane transporter activity
VIC01_RS05175	COG0577	efflux transmembrane transporter activity
VIC01_RS05175	COG1136	(ABC) transporter
VIC01_RS05180	COG1136	(ABC) transporter
VIC01_RS05190	COG3254	rhamnose metabolic process
VIC01_RS05230	COG2755	lipolytic protein G-D-S-L family
VIC01_RS05235	COG3250	beta-galactosidase activity
VIC01_RS05270	COG1629	transport
VIC01_RS05280	COG4771	TonB-dependent receptor
VIC01_RS05290	COG4206	TonB-dependent receptor
VIC01_RS05290	COG1629	transport
VIC01_RS05325	COG3119	arylsulfatase activity
VIC01_RS05335	COG3250	beta-galactosidase activity
VIC01_RS05340	COG2755	lipolytic protein G-D-S-L family
VIC01_RS05385	COG3401	FG-GAP repeat protein
VIC01_RS05390	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
VIC01_RS05395	COG3254	rhamnose metabolic process
VIC01_RS05400	COG3292	Two component regulator propeller
VIC01_RS05400	COG2205	protein histidine kinase activity
VIC01_RS05400	COG0745	RESPONSE REGULATOR receiver
VIC01_RS05410	COG0335	large ribosomal subunit rRNA binding
VIC01_RS05415	COG0737	Belongs to the 5'-nucleotidase family
VIC01_RS05420	COG0737	Belongs to the 5'-nucleotidase family
VIC01_RS05425	COG1472	Belongs to the glycosyl hydrolase 3 family
VIC01_RS05435	COG0436	Aminotransferase
VIC01_RS05440	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
VIC01_RS05440	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
VIC01_RS05465	COG1472	Belongs to the glycosyl hydrolase 3 family
VIC01_RS05490	COG1629	transport
VIC01_RS05490	COG4206	TonB-dependent receptor
VIC01_RS05560	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
VIC01_RS05615	COG4948	Mandelate Racemase Muconate Lactonizing
VIC01_RS05625	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
VIC01_RS05635	COG1629	transport
VIC01_RS05635	COG4206	TonB-dependent receptor
VIC01_RS05685	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
VIC01_RS05685	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
VIC01_RS05690	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VIC01_RS05695	COG1078	dGTPase activity
VIC01_RS05700	COG0284	orotidine-5'-phosphate decarboxylase activity
VIC01_RS05705	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
VIC01_RS05715	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
VIC01_RS05735	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
VIC01_RS05745	COG1966	Carbon starvation protein
VIC01_RS05760	COG3525	Glycosyl hydrolase, family 20, catalytic domain
VIC01_RS05775	COG1649	PFAM Uncharacterised BCR, COG1649
VIC01_RS05785	COG2059	Chromate
VIC01_RS05790	COG3292	Two component regulator propeller
VIC01_RS05790	COG2205	protein histidine kinase activity
VIC01_RS05790	COG0745	RESPONSE REGULATOR receiver
VIC01_RS05800	COG1280	lysine exporter protein (LysE YggA)
VIC01_RS05815	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
VIC01_RS05840	COG0745	RESPONSE REGULATOR receiver
VIC01_RS05870	COG0681	Belongs to the peptidase S26 family
VIC01_RS05905	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
VIC01_RS05910	COG0009	L-threonylcarbamoyladenylate synthase
VIC01_RS05920	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
VIC01_RS05965	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
VIC01_RS05970	COG2333	competence protein COMEC
VIC01_RS05970	COG0658	competence protein
VIC01_RS05975	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
VIC01_RS05985	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
VIC01_RS06005	COG0635	Involved in the biosynthesis of porphyrin-containing compound
VIC01_RS06010	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
VIC01_RS06035	COG0360	Binds together with S18 to 16S ribosomal RNA
VIC01_RS06040	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
VIC01_RS06045	COG0359	binds to the 23S rRNA
VIC01_RS06060	COG0318	PFAM AMP-dependent synthetase and ligase
VIC01_RS06065	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
VIC01_RS06080	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
VIC01_RS06100	COG0778	Nitroreductase
VIC01_RS06105	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
VIC01_RS06115	COG0860	N-Acetylmuramoyl-L-alanine amidase
VIC01_RS06140	COG0798	PFAM Bile acid sodium symporter
VIC01_RS06145	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
VIC01_RS06180	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
VIC01_RS06200	COG0110	maltose O-acetyltransferase activity
VIC01_RS06240	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
VIC01_RS06245	COG4804	nuclease activity
VIC01_RS06250	COG0732	type I restriction modification DNA specificity domain
VIC01_RS06265	COG0732	type I restriction modification DNA specificity domain
VIC01_RS06290	COG1132	(ABC) transporter
VIC01_RS06305	COG3876	Protein conserved in bacteria
VIC01_RS06320	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
VIC01_RS06325	COG2502	aspartate--ammonia ligase
VIC01_RS06335	COG4206	TonB-dependent receptor
VIC01_RS06335	COG1629	transport
VIC01_RS06350	COG3525	Glycosyl hydrolase, family 20, catalytic domain
VIC01_RS06370	COG3525	Glycosyl hydrolase, family 20, catalytic domain
VIC01_RS06380	COG3525	Glycosyl hydrolase, family 20, catalytic domain
VIC01_RS06390	COG3250	beta-galactosidase activity
VIC01_RS06400	COG1131	(ABC) transporter
VIC01_RS06445	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VIC01_RS06450	COG1917	Cupin 2, conserved barrel domain protein
VIC01_RS06450	COG4977	sequence-specific DNA binding
VIC01_RS06460	COG0363	glucosamine-6-phosphate deaminase activity
VIC01_RS06465	COG0363	glucosamine-6-phosphate deaminase activity
VIC01_RS06470	COG2271	Major facilitator Superfamily
VIC01_RS06485	COG1940	carbohydrate kinase activity
VIC01_RS06490	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
VIC01_RS06495	COG0166	Belongs to the GPI family
VIC01_RS06500	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
VIC01_RS06505	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
VIC01_RS06515	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
VIC01_RS06530	COG1530	ribonuclease E activity
VIC01_RS06535	COG0776	regulation of translation
VIC01_RS06545	COG0629	single-stranded DNA binding
VIC01_RS06565	COG5002	protein histidine kinase activity
VIC01_RS06570	COG0745	RESPONSE REGULATOR receiver
VIC01_RS06575	COG0252	asparaginase activity
VIC01_RS06580	COG0159	tryptophan synthase activity
VIC01_RS06585	COG0135	phosphoribosylanthranilate isomerase activity
VIC01_RS06590	COG0134	indole-3-glycerol-phosphate synthase activity
VIC01_RS06595	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
VIC01_RS06600	COG0512	Glutamine amidotransferase of anthranilate synthase
VIC01_RS06605	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
VIC01_RS06610	COG0133	tryptophan synthase activity
VIC01_RS06640	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VIC01_RS06665	COG2814	Major facilitator Superfamily
VIC01_RS06665	COG0477	Major facilitator Superfamily
VIC01_RS06675	COG0823	Involved in the tonB-independent uptake of proteins
VIC01_RS06675	COG4946	Tricorn protease homolog
VIC01_RS06675	COG1506	peptidase
VIC01_RS06705	COG2885	chlorophyll binding
VIC01_RS06720	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
VIC01_RS06725	COG0242	peptide deformylase activity
VIC01_RS06735	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
VIC01_RS06740	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
VIC01_RS06745	COG0291	Belongs to the bacterial ribosomal protein bL35 family
VIC01_RS06750	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
VIC01_RS06760	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
VIC01_RS06835	COG1895	HEPN domain
VIC01_RS06870	COG0367	asparagine synthase
VIC01_RS06880	COG0070	glutamate synthase
VIC01_RS06880	COG0069	glutamate synthase activity
VIC01_RS06880	COG0067	glutamate synthase
VIC01_RS06890	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
VIC01_RS06895	COG0436	Aminotransferase
VIC01_RS06905	COG0347	Belongs to the P(II) protein family
VIC01_RS06910	COG0004	ammonium transporteR
VIC01_RS06920	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
VIC01_RS06930	COG0505	Belongs to the CarA family
VIC01_RS06940	COG0784	Response regulator, receiver
VIC01_RS06940	COG2205	protein histidine kinase activity
VIC01_RS06945	COG0071	Belongs to the small heat shock protein (HSP20) family
VIC01_RS06950	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
VIC01_RS06980	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
VIC01_RS06985	COG0351	phosphomethylpyrimidine kinase
VIC01_RS06985	COG0352	thiamine-phosphate diphosphorylase activity
VIC01_RS06990	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
VIC01_RS07005	COG2205	protein histidine kinase activity
VIC01_RS07005	COG0784	Response regulator, receiver
VIC01_RS07010	COG0745	RESPONSE REGULATOR receiver
VIC01_RS07015	COG0463	Glycosyl transferase, family 2
VIC01_RS07020	COG0438	transferase activity, transferring glycosyl groups
VIC01_RS07025	COG1442	glycosyl transferase family 8
VIC01_RS07025	COG1216	Glycosyl transferase, family 2
VIC01_RS07035	COG0438	transferase activity, transferring glycosyl groups
VIC01_RS07055	COG1215	transferase activity, transferring glycosyl groups
VIC01_RS07065	COG0438	transferase activity, transferring glycosyl groups
VIC01_RS07085	COG1216	Glycosyl transferase, family 2
VIC01_RS07090	COG1216	Glycosyl transferase, family 2
VIC01_RS07115	COG1215	transferase activity, transferring glycosyl groups
VIC01_RS07135	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
VIC01_RS07140	COG0745	RESPONSE REGULATOR receiver
VIC01_RS07140	COG3292	Two component regulator propeller
VIC01_RS07140	COG2205	protein histidine kinase activity
VIC01_RS07155	COG2115	Belongs to the xylose isomerase family
VIC01_RS07180	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
VIC01_RS07190	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
VIC01_RS07195	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
VIC01_RS07200	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
VIC01_RS07215	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
VIC01_RS07230	COG0581	inorganic phosphate transmembrane transporter activity
VIC01_RS07235	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
VIC01_RS07250	COG1122	ATPase activity
VIC01_RS07305	COG1442	glycosyl transferase family 8
VIC01_RS07305	COG1216	Glycosyl transferase, family 2
VIC01_RS07325	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
VIC01_RS07410	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
VIC01_RS07415	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
VIC01_RS07440	COG0481	GTPase activity
VIC01_RS07445	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
VIC01_RS07450	COG5002	protein histidine kinase activity
VIC01_RS07455	COG0531	amino acid
VIC01_RS07470	COG3142	Participates in the control of copper homeostasis
VIC01_RS07475	COG2066	Belongs to the glutaminase family
VIC01_RS07480	COG0076	glutamate decarboxylase activity
VIC01_RS07495	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
VIC01_RS07510	COG4656	Part of a membrane complex involved in electron transport
VIC01_RS07515	COG4658	electron transport chain
VIC01_RS07520	COG4659	FMN binding
VIC01_RS07525	COG4660	Part of a membrane complex involved in electron transport
VIC01_RS07530	COG4657	Part of a membrane complex involved in electron transport
VIC01_RS07540	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
VIC01_RS07550	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
VIC01_RS07555	COG1027	Aspartate ammonia-lyase
VIC01_RS07610	COG0167	dihydroorotate dehydrogenase activity
VIC01_RS07615	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
VIC01_RS07630	COG0436	Aminotransferase
VIC01_RS07635	COG4591	ABC-type transport system involved in lipoprotein release permease component
VIC01_RS07640	COG2431	L-lysine efflux transmembrane transporter activity
VIC01_RS07665	COG0019	diaminopimelate decarboxylase activity
VIC01_RS07670	COG0527	aspartate kinase activity
VIC01_RS07675	COG2884	Cell division ATP-binding protein ftsE
VIC01_RS07680	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
VIC01_RS07680	COG0140	phosphoribosyl-ATP diphosphatase activity
VIC01_RS07685	COG0107	imidazoleglycerol-phosphate synthase activity
VIC01_RS07690	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
VIC01_RS07700	COG0788	formyltetrahydrofolate deformylase activity
VIC01_RS07730	COG3250	beta-galactosidase activity
VIC01_RS07770	COG5146	pantothenate kinase activity
VIC01_RS07785	COG0745	RESPONSE REGULATOR receiver
VIC01_RS07785	COG2205	protein histidine kinase activity
VIC01_RS07785	COG3292	Two component regulator propeller
VIC01_RS07795	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
VIC01_RS07800	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
VIC01_RS07805	COG2195	Cleaves the N-terminal amino acid of tripeptides
VIC01_RS07810	COG0404	The glycine cleavage system catalyzes the degradation of glycine
VIC01_RS07815	COG0475	glutathione-regulated potassium exporter activity
VIC01_RS07825	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
VIC01_RS07830	COG0193	aminoacyl-tRNA hydrolase activity
VIC01_RS07835	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
VIC01_RS07845	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
VIC01_RS07850	COG1862	Preprotein translocase
VIC01_RS07910	COG0542	response to heat
VIC01_RS07920	COG0583	DNA-binding transcription factor activity
VIC01_RS07925	COG2855	membrane
VIC01_RS07945	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
VIC01_RS07950	COG0805	protein transport
VIC01_RS07955	COG0686	Belongs to the AlaDH PNT family
VIC01_RS07960	COG0739	heme binding
VIC01_RS07970	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
VIC01_RS07990	COG3279	Response regulator of the LytR AlgR family
VIC01_RS08070	COG1538	Outer membrane efflux protein
VIC01_RS08090	COG0534	Mate efflux family protein
VIC01_RS08095	COG0564	pseudouridine synthase activity
VIC01_RS08105	COG4974	Belongs to the 'phage' integrase family
VIC01_RS08185	COG4206	TonB-dependent receptor
VIC01_RS08185	COG1629	transport
VIC01_RS08190	COG0702	epimerase
VIC01_RS08225	COG1192	Involved in chromosome partitioning
VIC01_RS08240	COG3177	Filamentation induced by cAMP protein fic
VIC01_RS08265	COG1196	nuclear chromosome segregation
VIC01_RS08265	COG0739	heme binding
VIC01_RS08265	COG0741	lytic transglycosylase activity
VIC01_RS08425	COG1484	DNA-dependent DNA replication
VIC01_RS08430	COG4584	PFAM Integrase catalytic
VIC01_RS08530	COG0346	lactoylglutathione lyase activity
VIC01_RS08535	COG1028	Short-chain dehydrogenase reductase Sdr
VIC01_RS08550	COG1063	alcohol dehydrogenase
VIC01_RS08585	COG4584	PFAM Integrase catalytic
VIC01_RS08590	COG1484	DNA-dependent DNA replication
VIC01_RS08775	COG4974	Belongs to the 'phage' integrase family
VIC01_RS08820	COG3550	peptidyl-serine autophosphorylation
VIC01_RS08830	COG1595	DNA-templated transcription, initiation
VIC01_RS08870	COG4584	PFAM Integrase catalytic
VIC01_RS08875	COG1484	DNA-dependent DNA replication
VIC01_RS08930	COG0556	nucleotide-excision repair
VIC01_RS08970	COG4974	Belongs to the 'phage' integrase family
VIC01_RS08980	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
VIC01_RS08985	COG1956	GAF domain-containing protein
VIC01_RS08990	COG0813	purine-nucleoside phosphorylase activity
VIC01_RS08995	COG4864	UPF0365 protein
VIC01_RS09010	COG0037	tRNA processing
VIC01_RS09040	COG0543	2 iron, 2 sulfur cluster binding
VIC01_RS09050	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
VIC01_RS09065	COG0211	Belongs to the bacterial ribosomal protein bL27 family
VIC01_RS09070	COG0261	This protein binds to 23S rRNA in the presence of protein L20
VIC01_RS09075	COG0546	phosphoglycolate phosphatase activity
VIC01_RS09080	COG0791	NLP P60 protein
VIC01_RS09085	COG1131	(ABC) transporter
VIC01_RS09095	COG0612	Peptidase, M16
VIC01_RS09100	COG0492	ferredoxin-NADP+ reductase activity
VIC01_RS09125	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
VIC01_RS09165	COG2211	Major facilitator Superfamily
VIC01_RS09185	COG1136	(ABC) transporter
VIC01_RS09185	COG0577	efflux transmembrane transporter activity
VIC01_RS09210	COG1012	belongs to the aldehyde dehydrogenase family
VIC01_RS09275	COG0519	Catalyzes the synthesis of GMP from XMP
VIC01_RS09280	COG0519	Catalyzes the synthesis of GMP from XMP
VIC01_RS09280	COG0518	GMP synthase (glutamine-hydrolyzing) activity
VIC01_RS09285	COG1970	mechanosensitive ion channel activity
VIC01_RS09295	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
VIC01_RS09300	COG1597	lipid kinase activity
VIC01_RS09305	COG2877	3-deoxy-8-phosphooctulonate synthase activity
VIC01_RS09340	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VIC01_RS09395	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
VIC01_RS09410	COG1269	ATP hydrolysis coupled proton transport
VIC01_RS09415	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
VIC01_RS09425	COG0058	SHG alpha-glucan phosphorylase activity
VIC01_RS09435	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
VIC01_RS09455	COG1176	ABC-type spermidine putrescine transport system, permease component I
VIC01_RS09460	COG1177	transmembrane transport
VIC01_RS09470	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
VIC01_RS09475	COG0352	thiamine-phosphate diphosphorylase activity
VIC01_RS09485	COG0754	glutathionylspermidine amidase activity
VIC01_RS09490	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
VIC01_RS09510	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
VIC01_RS09515	COG2022	thiamine diphosphate biosynthetic process
VIC01_RS09520	COG0352	thiamine-phosphate diphosphorylase activity
VIC01_RS09580	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
VIC01_RS09580	COG3153	acetyltransferase
VIC01_RS09585	COG3852	Histidine kinase
VIC01_RS09605	COG1136	(ABC) transporter
VIC01_RS09605	COG4591	ABC-type transport system involved in lipoprotein release permease component
VIC01_RS09610	COG0577	efflux transmembrane transporter activity
VIC01_RS09620	COG2244	polysaccharide biosynthetic process
VIC01_RS09630	COG1181	Belongs to the D-alanine--D-alanine ligase family
VIC01_RS09645	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
VIC01_RS09650	COG1028	Short-chain dehydrogenase reductase Sdr
VIC01_RS09725	COG0535	radical SAM domain protein
VIC01_RS09730	COG0438	transferase activity, transferring glycosyl groups
VIC01_RS09750	COG0217	transcriptional regulatory protein
VIC01_RS09755	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VIC01_RS09755	COG0072	phenylalanine-tRNA ligase activity
VIC01_RS09760	COG0305	Participates in initiation and elongation during chromosome replication
VIC01_RS09765	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
VIC01_RS09780	COG4191	Histidine kinase
VIC01_RS09800	COG0386	Belongs to the glutathione peroxidase family
VIC01_RS09850	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
VIC01_RS09860	COG0438	transferase activity, transferring glycosyl groups
VIC01_RS09895	COG0339	signal peptide processing
VIC01_RS09900	COG0577	efflux transmembrane transporter activity
VIC01_RS09900	COG1136	(ABC) transporter
VIC01_RS09905	COG0577	efflux transmembrane transporter activity
VIC01_RS09905	COG1136	(ABC) transporter
VIC01_RS09925	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
VIC01_RS10015	COG0758	DNA mediated transformation
VIC01_RS10050	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
VIC01_RS10115	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
VIC01_RS10205	COG0488	(ABC) transporter
VIC01_RS10255	COG4974	Belongs to the 'phage' integrase family
VIC01_RS10295	COG1192	Involved in chromosome partitioning
VIC01_RS10325	COG0574	Belongs to the PEP-utilizing enzyme family
VIC01_RS10325	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
VIC01_RS10330	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
VIC01_RS10335	COG0564	pseudouridine synthase activity
VIC01_RS10350	COG0823	Involved in the tonB-independent uptake of proteins
VIC01_RS10350	COG1506	peptidase
VIC01_RS10360	COG0706	membrane insertase activity
VIC01_RS10365	COG0504	CTP synthase activity
VIC01_RS10400	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
VIC01_RS10405	COG2885	chlorophyll binding
VIC01_RS10410	COG0534	Mate efflux family protein
VIC01_RS10415	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
VIC01_RS10430	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
VIC01_RS10435	COG0540	Belongs to the ATCase OTCase family
VIC01_RS10455	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
VIC01_RS10460	COG1129	ABC transporter
VIC01_RS10460	COG0842	Transport permease protein
VIC01_RS10465	COG0842	Transport permease protein
VIC01_RS10470	COG1131	(ABC) transporter
VIC01_RS10475	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VIC01_RS10495	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
VIC01_RS10510	COG0483	inositol monophosphate 1-phosphatase activity
VIC01_RS10525	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
VIC01_RS10535	COG0442	prolyl-tRNA aminoacylation
VIC01_RS10540	COG1131	(ABC) transporter
VIC01_RS10545	COG0390	transport system, permease component
VIC01_RS10555	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
VIC01_RS10570	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
VIC01_RS10585	COG0543	2 iron, 2 sulfur cluster binding
VIC01_RS10590	COG0167	dihydroorotate dehydrogenase activity
VIC01_RS10595	COG0336	Belongs to the RNA methyltransferase TrmD family
VIC01_RS10605	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
VIC01_RS10625	COG1752	Esterase of the alpha-beta hydrolase superfamily
VIC01_RS10635	COG0542	response to heat
VIC01_RS10660	COG0671	phosphoesterase, PA-phosphatase related
VIC01_RS10685	COG2304	oxidoreductase activity
VIC01_RS10700	COG0714	Associated with various cellular activities
VIC01_RS10705	COG0776	regulation of translation
VIC01_RS10710	COG0776	regulation of translation
VIC01_RS10715	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
VIC01_RS10720	COG0552	protein localization to endoplasmic reticulum
VIC01_RS10730	COG0267	Belongs to the bacterial ribosomal protein bL33 family
VIC01_RS10735	COG0227	Belongs to the bacterial ribosomal protein bL28 family
VIC01_RS10745	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
VIC01_RS10750	COG0024	Methionine aminopeptidase
VIC01_RS10760	COG0110	maltose O-acetyltransferase activity
VIC01_RS10765	COG0697	spore germination
VIC01_RS10775	COG4176	ABC-type proline glycine betaine transport system permease component
VIC01_RS10785	COG2204	response regulator
VIC01_RS10795	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
VIC01_RS10805	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
VIC01_RS10810	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
VIC01_RS10815	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
VIC01_RS10850	COG3387	PFAM Glycoside hydrolase 15-related
VIC01_RS10865	COG4106	trans-aconitate 2-methyltransferase activity
VIC01_RS10885	COG0494	nUDIX hydrolase
VIC01_RS10895	COG2205	protein histidine kinase activity
VIC01_RS10905	COG1285	pathogenesis
VIC01_RS10915	COG0561	phosphatase activity
VIC01_RS10930	COG3525	Glycosyl hydrolase, family 20, catalytic domain
VIC01_RS10945	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
VIC01_RS10950	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
VIC01_RS10955	COG0513	Belongs to the DEAD box helicase family
VIC01_RS10965	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
VIC01_RS10970	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
VIC01_RS10975	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
VIC01_RS10980	COG1805	sodium ion transport
VIC01_RS11015	COG0562	UDP-galactopyranose mutase
VIC01_RS11035	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
VIC01_RS11040	COG0463	Glycosyl transferase, family 2
VIC01_RS11060	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
VIC01_RS11080	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
VIC01_RS11090	COG2244	polysaccharide biosynthetic process
VIC01_RS11100	COG3579	cysteine-type endopeptidase activity
VIC01_RS11105	COG1757	Na H antiporter
VIC01_RS11135	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
VIC01_RS11140	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
VIC01_RS11155	COG0716	FMN binding
VIC01_RS11175	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
VIC01_RS11185	COG0668	transmembrane transport
VIC01_RS11245	COG4771	TonB-dependent receptor
VIC01_RS11420	COG0657	acetylesterase activity
VIC01_RS11420	COG2755	lipolytic protein G-D-S-L family
VIC01_RS11655	COG4115	mRNA cleavage
VIC01_RS11760	COG1342	Belongs to the UPF0251 family
VIC01_RS11770	COG4974	Belongs to the 'phage' integrase family
VIC01_RS11795	COG3617	BRO family, N-terminal domain
VIC01_RS11800	COG3250	beta-galactosidase activity
VIC01_RS11820	COG3852	Histidine kinase
VIC01_RS11825	COG2204	response regulator
VIC01_RS11860	COG1136	(ABC) transporter
VIC01_RS11870	COG0697	spore germination
VIC01_RS11875	COG0156	8-amino-7-oxononanoate synthase activity
VIC01_RS11880	COG1597	lipid kinase activity
VIC01_RS11885	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
VIC01_RS11890	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
VIC01_RS11895	COG0343	queuine tRNA-ribosyltransferase activity
VIC01_RS11905	COG1011	Hydrolase
VIC01_RS11915	COG0560	Phosphoserine phosphatase
VIC01_RS11915	COG3830	Belongs to the UPF0237 family
VIC01_RS11920	COG0513	Belongs to the DEAD box helicase family
VIC01_RS11955	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
VIC01_RS12010	COG1629	transport
VIC01_RS12010	COG4206	TonB-dependent receptor
VIC01_RS12015	COG0561	phosphatase activity
VIC01_RS12030	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
VIC01_RS12040	COG1492	cobalamin metabolic process
VIC01_RS12045	COG2096	Adenosyltransferase
VIC01_RS12050	COG1797	cobyrinic acid a,c-diamide synthase activity
VIC01_RS12060	COG4771	TonB-dependent receptor
VIC01_RS12065	COG4771	TonB-dependent receptor
VIC01_RS12080	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
VIC01_RS12085	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
VIC01_RS12090	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
VIC01_RS12095	COG4771	TonB-dependent receptor
VIC01_RS12105	COG4771	TonB-dependent receptor
VIC01_RS12115	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
VIC01_RS12120	COG4753	response regulator
VIC01_RS12120	COG2207	Transcriptional regulator
VIC01_RS12125	COG0662	Cupin 2, conserved barrel domain protein
VIC01_RS12125	COG2207	Transcriptional regulator
VIC01_RS12155	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
VIC01_RS12160	COG1120	ATPase activity
VIC01_RS12185	COG0246	Mannitol dehydrogenase
VIC01_RS12190	COG1904	glucuronate isomerase
VIC01_RS12205	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
VIC01_RS12245	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
VIC01_RS12260	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
VIC01_RS12280	COG0501	Belongs to the peptidase M48B family
VIC01_RS12295	COG1609	Transcriptional regulator
VIC01_RS12300	COG2721	sulfolactate sulfo-lyase activity
VIC01_RS12305	COG1757	Na H antiporter
VIC01_RS12320	COG2431	L-lysine efflux transmembrane transporter activity
VIC01_RS12325	COG3104	oligopeptide transport
VIC01_RS12330	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
VIC01_RS12340	COG3942	CHAP domain
VIC01_RS12340	COG1388	LysM domain
VIC01_RS12365	COG0556	nucleotide-excision repair
VIC01_RS12375	COG1739	Uncharacterized protein family UPF0029
VIC01_RS12380	COG2176	DNA-directed DNA polymerase activity
VIC01_RS12385	COG1752	Esterase of the alpha-beta hydrolase superfamily
VIC01_RS12390	COG1312	Catalyzes the dehydration of D-mannonate
VIC01_RS12395	COG1523	belongs to the glycosyl hydrolase 13 family
VIC01_RS12400	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
VIC01_RS12430	COG1022	Amp-dependent synthetase and ligase
VIC01_RS12435	COG0321	lipoyl(octanoyl) transferase activity
VIC01_RS12450	COG2217	Heavy metal translocating P-type atpase
VIC01_RS12460	COG0357	Ribosomal RNA small subunit methyltransferase G
VIC01_RS12465	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
VIC01_RS12470	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
VIC01_RS12470	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
VIC01_RS12490	COG2759	Belongs to the formate--tetrahydrofolate ligase family
VIC01_RS12515	COG3973	AAA domain
VIC01_RS12535	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
VIC01_RS12540	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
VIC01_RS12550	COG2425	protein containing a von Willebrand factor type A (vWA) domain
VIC01_RS12565	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
VIC01_RS12570	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
VIC01_RS12575	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
VIC01_RS12580	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
VIC01_RS12585	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
VIC01_RS12590	COG0356	it plays a direct role in the translocation of protons across the membrane
VIC01_RS12605	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
VIC01_RS12630	COG5002	protein histidine kinase activity
VIC01_RS12635	COG0745	RESPONSE REGULATOR receiver
VIC01_RS12645	COG3119	arylsulfatase activity
VIC01_RS12655	COG1151	hydroxylamine reductase activity
VIC01_RS12660	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
VIC01_RS12695	COG1678	Uncharacterized ACR, COG1678
VIC01_RS12710	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
VIC01_RS12720	COG0218	Necessary for normal cell division and for the maintenance of normal septation
VIC01_RS12830	COG0438	transferase activity, transferring glycosyl groups
VIC01_RS12880	COG0488	(ABC) transporter
VIC01_RS12905	COG0251	oxidation-reduction process
VIC01_RS12920	COG1501	Belongs to the glycosyl hydrolase 31 family
VIC01_RS12925	COG5012	cobalamin binding
VIC01_RS12960	COG1629	transport
VIC01_RS12970	COG4771	TonB-dependent receptor
VIC01_RS13010	COG4206	TonB-dependent receptor
VIC01_RS13010	COG1629	transport
VIC01_RS13030	COG1629	transport
VIC01_RS13030	COG4206	TonB-dependent receptor
VIC01_RS13050	COG4206	TonB-dependent receptor
VIC01_RS13050	COG1629	transport
VIC01_RS13060	COG3292	Two component regulator propeller
VIC01_RS13060	COG2205	protein histidine kinase activity
VIC01_RS13060	COG0745	RESPONSE REGULATOR receiver
VIC01_RS13065	COG3250	beta-galactosidase activity
VIC01_RS13075	COG2183	response to ionizing radiation
VIC01_RS13080	COG2816	NAD+ diphosphatase activity
VIC01_RS13090	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
VIC01_RS13095	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
VIC01_RS13100	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
VIC01_RS13105	COG0297	glycogen (starch) synthase activity
VIC01_RS13135	COG0497	DNA recombination
VIC01_RS13140	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
VIC01_RS13155	COG1918	ferrous iron import across plasma membrane
VIC01_RS13155	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
VIC01_RS13190	COG0358	DNA primase activity
VIC01_RS13215	COG3177	Filamentation induced by cAMP protein fic
VIC01_RS13275	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
VIC01_RS13285	COG1139	Iron-sulfur cluster binding protein
VIC01_RS13290	COG0247	lactate metabolic process
VIC01_RS13295	COG4566	intracellular signal transduction
VIC01_RS13310	COG3279	Response regulator of the LytR AlgR family
VIC01_RS13320	COG1136	(ABC) transporter
VIC01_RS13320	COG0577	efflux transmembrane transporter activity
VIC01_RS13325	COG1136	(ABC) transporter
VIC01_RS13330	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VIC01_RS13345	COG1271	oxidase subunit
VIC01_RS13355	COG0363	glucosamine-6-phosphate deaminase activity
VIC01_RS13360	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
VIC01_RS13365	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
VIC01_RS13380	COG0252	asparaginase activity
VIC01_RS13385	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
VIC01_RS13395	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
VIC01_RS13400	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
VIC01_RS13405	COG1119	ATPase activity
VIC01_RS13430	COG2226	methyltransferase
VIC01_RS13445	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
VIC01_RS13445	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
VIC01_RS13450	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
VIC01_RS13450	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
VIC01_RS13465	COG0438	transferase activity, transferring glycosyl groups
VIC01_RS13480	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
VIC01_RS13515	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
VIC01_RS13520	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
VIC01_RS13545	COG2755	lipolytic protein G-D-S-L family
VIC01_RS13545	COG0657	acetylesterase activity
VIC01_RS13555	COG0228	four-way junction DNA binding
VIC01_RS13580	COG0488	(ABC) transporter
VIC01_RS13590	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
VIC01_RS13600	COG0534	Mate efflux family protein
VIC01_RS13605	COG3263	regulation of cellular component size
VIC01_RS13610	COG1914	H( )-stimulated, divalent metal cation uptake system
VIC01_RS13630	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
VIC01_RS13635	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
VIC01_RS13640	COG3059	membrane
VIC01_RS13650	COG5002	protein histidine kinase activity
VIC01_RS13650	COG0784	Response regulator, receiver
VIC01_RS13665	COG3408	Glycogen debranching enzyme
VIC01_RS13685	COG4771	TonB-dependent receptor
VIC01_RS13695	COG0737	Belongs to the 5'-nucleotidase family
VIC01_RS13700	COG5002	protein histidine kinase activity
VIC01_RS13700	COG2205	protein histidine kinase activity
VIC01_RS13700	COG0784	Response regulator, receiver
VIC01_RS13705	COG0484	heat shock protein binding
VIC01_RS13725	COG1295	ribonuclease BN
VIC01_RS13730	COG0307	riboflavin synthase, alpha
VIC01_RS13740	COG0318	PFAM AMP-dependent synthetase and ligase
VIC01_RS13745	COG0668	transmembrane transport
VIC01_RS13775	COG2205	protein histidine kinase activity
VIC01_RS13785	COG1620	l-lactate permease
VIC01_RS13790	COG2873	o-acetylhomoserine
VIC01_RS13800	COG4771	TonB-dependent receptor
VIC01_RS13810	COG0306	phosphate transporter
VIC01_RS13820	COG0586	Pfam SNARE associated Golgi protein
VIC01_RS13830	COG1522	sequence-specific DNA binding
VIC01_RS13835	COG0598	Magnesium transport protein CorA
VIC01_RS13840	COG1733	regulation of RNA biosynthetic process
VIC01_RS13910	COG1484	DNA-dependent DNA replication
VIC01_RS13915	COG4584	PFAM Integrase catalytic
VIC01_RS13945	COG3940	Belongs to the glycosyl hydrolase 43 family
VIC01_RS13950	COG3250	beta-galactosidase activity
VIC01_RS13955	COG3250	beta-galactosidase activity
VIC01_RS13965	COG4771	TonB-dependent receptor
VIC01_RS13975	COG4206	TonB-dependent receptor
VIC01_RS13975	COG1629	transport
VIC01_RS13980	COG0490	domain, Protein
VIC01_RS13980	COG2985	domain, Protein
VIC01_RS13985	COG3250	beta-galactosidase activity
VIC01_RS14060	COG3023	N-Acetylmuramoyl-L-alanine amidase
VIC01_RS14115	COG0438	transferase activity, transferring glycosyl groups
VIC01_RS14130	COG0438	transferase activity, transferring glycosyl groups
VIC01_RS14145	COG0110	maltose O-acetyltransferase activity
VIC01_RS14150	COG1216	Glycosyl transferase, family 2
VIC01_RS14155	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
VIC01_RS14160	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
VIC01_RS14190	COG3408	Glycogen debranching enzyme
VIC01_RS14200	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
VIC01_RS14210	COG0148	phosphopyruvate hydratase activity
VIC01_RS14230	COG0514	ATP-dependent DNA helicase (RecQ)
VIC01_RS14250	COG0463	Glycosyl transferase, family 2
VIC01_RS14265	COG1971	Probably functions as a manganese efflux pump
VIC01_RS14285	COG0339	signal peptide processing
VIC01_RS14295	COG2131	deaminase
VIC01_RS14300	COG0793	Belongs to the peptidase S41A family
VIC01_RS14315	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
VIC01_RS14325	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
VIC01_RS14340	COG1741	Belongs to the pirin family
VIC01_RS14350	COG0708	Exodeoxyribonuclease III
VIC01_RS14385	COG0738	Major facilitator superfamily
VIC01_RS14415	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
VIC01_RS14425	COG0820	rRNA (adenine-C2-)-methyltransferase activity
VIC01_RS14430	COG1215	transferase activity, transferring glycosyl groups
VIC01_RS14570	COG1192	Involved in chromosome partitioning
VIC01_RS14705	COG0784	Response regulator, receiver
VIC01_RS14705	COG2198	Histidine kinase
VIC01_RS14705	COG2205	protein histidine kinase activity
VIC01_RS14755	COG0338	D12 class N6 adenine-specific DNA methyltransferase
VIC01_RS14775	COG0739	heme binding
VIC01_RS14845	COG4974	Belongs to the 'phage' integrase family
VIC01_RS14890	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
VIC01_RS14915	COG1234	tRNA 3'-trailer cleavage
VIC01_RS14920	COG1595	DNA-templated transcription, initiation
VIC01_RS14935	COG4771	TonB-dependent receptor
VIC01_RS14945	COG3956	TIGRFAM MazG family protein
VIC01_RS14950	COG0525	valine-tRNA ligase activity
VIC01_RS14980	COG0653	protein targeting
VIC01_RS14995	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
VIC01_RS15015	COG1253	flavin adenine dinucleotide binding
VIC01_RS15030	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
VIC01_RS15045	COG0028	Belongs to the TPP enzyme family
VIC01_RS15050	COG0129	dihydroxy-acid dehydratase activity
VIC01_RS15060	COG1047	Peptidyl-prolyl cis-trans
VIC01_RS15075	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
VIC01_RS15090	COG0101	tRNA pseudouridine synthase activity
VIC01_RS15100	COG1702	phosphate starvation-inducible protein PhoH
VIC01_RS15105	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
VIC01_RS15110	COG2226	methyltransferase
VIC01_RS15115	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
VIC01_RS15130	COG1704	LemA family
VIC01_RS15135	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
VIC01_RS15145	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
VIC01_RS15145	COG0778	Nitroreductase
VIC01_RS15160	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
VIC01_RS15165	COG2233	PERMEase
VIC01_RS15175	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
VIC01_RS15180	COG1410	methionine synthase
VIC01_RS15180	COG0646	methionine synthase
VIC01_RS15185	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
VIC01_RS15310	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
VIC01_RS15315	COG2814	Major facilitator Superfamily
VIC01_RS15335	COG0424	maF-like protein
VIC01_RS15340	COG0561	phosphatase activity
VIC01_RS15355	COG0778	Nitroreductase
VIC01_RS15370	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
VIC01_RS15380	COG0511	ligase activity, forming carbon-carbon bonds
VIC01_RS15385	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
VIC01_RS15395	COG4221	oxidoreductase activity
VIC01_RS15405	COG2217	Heavy metal translocating P-type atpase
VIC01_RS15415	COG2755	lipolytic protein G-D-S-L family
VIC01_RS15415	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
VIC01_RS15450	COG1193	negative regulation of DNA recombination
VIC01_RS15465	COG4771	TonB-dependent receptor
VIC01_RS15480	COG1760	l-serine dehydratase
VIC01_RS15495	COG0569	domain protein
VIC01_RS15500	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
VIC01_RS15505	COG1350	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
VIC01_RS15515	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
VIC01_RS15550	COG4771	TonB-dependent receptor
VIC01_RS15560	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
VIC01_RS15575	COG0446	pyridine nucleotide-disulphide oxidoreductase
VIC01_RS15580	COG0534	Mate efflux family protein
VIC01_RS15590	COG2050	protein possibly involved in aromatic compounds catabolism
VIC01_RS15595	COG1169	isochorismate synthase
VIC01_RS15605	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
VIC01_RS15610	COG4948	Mandelate Racemase Muconate Lactonizing
VIC01_RS15630	COG0556	nucleotide-excision repair
VIC01_RS15690	COG0438	transferase activity, transferring glycosyl groups
VIC01_RS15710	COG1216	Glycosyl transferase, family 2
VIC01_RS15840	COG0443	Heat shock 70 kDa protein
VIC01_RS15860	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
VIC01_RS15865	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
VIC01_RS15880	COG4771	TonB-dependent receptor
VIC01_RS15885	COG2205	protein histidine kinase activity
VIC01_RS15885	COG0745	RESPONSE REGULATOR receiver
VIC01_RS15885	COG3292	Two component regulator propeller
VIC01_RS15890	COG0157	Belongs to the NadC ModD family
VIC01_RS15895	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
VIC01_RS15905	COG2195	Cleaves the N-terminal amino acid of tripeptides
VIC01_RS15920	COG3118	belongs to the thioredoxin family
VIC01_RS15930	COG1592	Rubrerythrin
VIC01_RS15930	COG1773	rubredoxin
VIC01_RS15945	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
VIC01_RS15945	COG0131	Imidazoleglycerol-phosphate dehydratase
VIC01_RS15950	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
VIC01_RS15955	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
VIC01_RS15960	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
VIC01_RS15975	COG0572	uridine kinase
VIC01_RS15980	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
VIC01_RS15990	COG0438	transferase activity, transferring glycosyl groups
VIC01_RS16060	COG4191	Histidine kinase
VIC01_RS16065	COG2204	response regulator
VIC01_RS16090	COG0577	efflux transmembrane transporter activity
VIC01_RS16090	COG1136	(ABC) transporter
VIC01_RS16100	COG0577	efflux transmembrane transporter activity
VIC01_RS16100	COG1136	(ABC) transporter
VIC01_RS16105	COG1136	(ABC) transporter
VIC01_RS16115	COG1388	LysM domain
VIC01_RS16115	COG1705	Flagellar rod assembly protein muramidase FlgJ
VIC01_RS16150	COG0393	Putative heavy-metal-binding
VIC01_RS16170	COG0488	(ABC) transporter
VIC01_RS16175	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
VIC01_RS16180	COG0484	heat shock protein binding
VIC01_RS16200	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
VIC01_RS16225	COG2160	L-arabinose isomerase activity
VIC01_RS16235	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
VIC01_RS16290	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
VIC01_RS16295	COG0673	inositol 2-dehydrogenase activity
VIC01_RS16335	COG2264	protein methyltransferase activity
VIC01_RS16365	COG5434	Belongs to the glycosyl hydrolase 28 family
VIC01_RS16380	COG1032	radical SAM domain protein
VIC01_RS16385	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
VIC01_RS16400	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
VIC01_RS16420	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
VIC01_RS16430	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
VIC01_RS16435	COG2311	Membrane
VIC01_RS16480	COG0463	Glycosyl transferase, family 2
VIC01_RS16485	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
VIC01_RS16490	COG1410	methionine synthase
VIC01_RS16490	COG0646	methionine synthase
VIC01_RS16495	COG1408	metallophosphoesterase
VIC01_RS16510	COG3591	Belongs to the peptidase S1B family
VIC01_RS16515	COG3591	Belongs to the peptidase S1B family
VIC01_RS16535	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
VIC01_RS16575	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
VIC01_RS16585	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
VIC01_RS16595	COG1834	amidinotransferase
VIC01_RS16600	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
VIC01_RS16605	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
VIC01_RS16605	COG0321	lipoyl(octanoyl) transferase activity
VIC01_RS16620	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
VIC01_RS16635	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
VIC01_RS16645	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
VIC01_RS16650	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
VIC01_RS16685	COG3292	Two component regulator propeller
VIC01_RS16685	COG2205	protein histidine kinase activity
VIC01_RS16685	COG0745	RESPONSE REGULATOR receiver
VIC01_RS16690	COG4948	Mandelate Racemase Muconate Lactonizing
VIC01_RS16705	COG0702	epimerase
VIC01_RS16710	COG1629	transport
VIC01_RS16715	COG4948	Mandelate Racemase Muconate Lactonizing
VIC01_RS16720	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
VIC01_RS16725	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
VIC01_RS16730	COG0534	Mate efflux family protein
VIC01_RS16740	COG1595	DNA-templated transcription, initiation
VIC01_RS16750	COG3525	Glycosyl hydrolase, family 20, catalytic domain
VIC01_RS16765	COG0126	phosphoglycerate kinase activity
VIC01_RS16775	COG4206	TonB-dependent receptor
VIC01_RS16775	COG1629	transport
VIC01_RS16830	COG4771	TonB-dependent receptor
VIC01_RS16900	COG2204	response regulator
VIC01_RS16925	COG2217	Heavy metal translocating P-type atpase
VIC01_RS16975	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VIC01_RS16980	COG1120	ATPase activity
VIC01_RS17010	COG1475	DNA binding
VIC01_RS17040	COG4206	TonB-dependent receptor
VIC01_RS17050	COG1741	Belongs to the pirin family
VIC01_RS17055	COG2353	YceI-like domain
VIC01_RS17060	COG1335	isochorismatase
VIC01_RS17065	COG1917	Cupin 2, conserved barrel domain protein
VIC01_RS17065	COG4977	sequence-specific DNA binding
VIC01_RS17070	COG0697	spore germination
VIC01_RS17210	COG4974	Belongs to the 'phage' integrase family
VIC01_RS17220	COG4804	nuclease activity
VIC01_RS17285	COG3681	Belongs to the UPF0597 family
VIC01_RS17305	COG1115	amino acid carrier protein
VIC01_RS17325	COG0602	queuosine metabolic process
VIC01_RS17335	COG2832	Protein of unknown function (DUF454)
VIC01_RS17350	COG1418	mRNA catabolic process
VIC01_RS17365	COG0006	proline dipeptidase activity
VIC01_RS17375	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
VIC01_RS17375	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
VIC01_RS17380	COG0514	ATP-dependent DNA helicase (RecQ)
VIC01_RS17385	COG3525	Glycosyl hydrolase, family 20, catalytic domain
VIC01_RS17395	COG0628	permease
VIC01_RS17400	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
VIC01_RS17410	COG1733	regulation of RNA biosynthetic process
VIC01_RS17420	COG0436	Aminotransferase
VIC01_RS17425	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
VIC01_RS17435	COG2186	Transcriptional regulator
VIC01_RS17445	COG1073	alpha beta
VIC01_RS17470	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VIC01_RS17475	COG1120	ATPase activity
VIC01_RS17485	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
VIC01_RS17490	COG3635	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
VIC01_RS17495	COG0527	aspartate kinase activity
VIC01_RS17495	COG0460	homoserine dehydrogenase
VIC01_RS17500	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
VIC01_RS17510	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
VIC01_RS17520	COG4771	TonB-dependent receptor
VIC01_RS17530	COG0826	peptidase U32
VIC01_RS17535	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
VIC01_RS17540	COG0673	inositol 2-dehydrogenase activity
VIC01_RS17570	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VIC01_RS17580	COG3590	peptidase
VIC01_RS17585	COG0488	(ABC) transporter
VIC01_RS17610	COG4771	TonB-dependent receptor
VIC01_RS17620	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
VIC01_RS17625	COG0735	belongs to the Fur family
VIC01_RS17645	COG0514	ATP-dependent DNA helicase (RecQ)
VIC01_RS17655	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VIC01_RS17665	COG0473	3-isopropylmalate dehydrogenase activity
VIC01_RS17675	COG0066	3-isopropylmalate dehydratase activity
VIC01_RS17680	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
VIC01_RS17685	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
VIC01_RS17730	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
VIC01_RS17735	COG0009	L-threonylcarbamoyladenylate synthase
VIC01_RS17740	COG0668	transmembrane transport
VIC01_RS17745	COG0426	domain, Protein
VIC01_RS17750	COG1242	4 iron, 4 sulfur cluster binding
VIC01_RS17755	COG1506	peptidase
VIC01_RS17755	COG0823	Involved in the tonB-independent uptake of proteins
VIC01_RS17760	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
VIC01_RS17780	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
VIC01_RS17810	COG4771	TonB-dependent receptor
VIC01_RS17815	COG0561	phosphatase activity
VIC01_RS17825	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
VIC01_RS17830	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
VIC01_RS17835	COG0511	ligase activity, forming carbon-carbon bonds
VIC01_RS17850	COG0546	phosphoglycolate phosphatase activity
VIC01_RS17910	COG0372	Belongs to the citrate synthase family
VIC01_RS17915	COG0538	isocitrate dehydrogenase activity
VIC01_RS17925	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
VIC01_RS17945	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
VIC01_RS17945	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
VIC01_RS17955	COG1595	DNA-templated transcription, initiation
VIC01_RS17965	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
VIC01_RS17975	COG1522	sequence-specific DNA binding
VIC01_RS18010	COG0811	peptide transport
VIC01_RS18020	COG0084	hydrolase, TatD family'
VIC01_RS18035	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
VIC01_RS18040	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
VIC01_RS18045	COG0205	6-phosphofructokinase activity
VIC01_RS18065	COG2373	Large extracellular alpha-helical protein
VIC01_RS18115	COG0590	tRNA wobble adenosine to inosine editing
VIC01_RS18120	COG2195	Cleaves the N-terminal amino acid of tripeptides
VIC01_RS18130	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
VIC01_RS18135	COG2239	Acts as a magnesium transporter
VIC01_RS18140	COG1196	nuclear chromosome segregation
VIC01_RS18155	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
VIC01_RS18170	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VIC01_RS18175	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
VIC01_RS18180	COG1192	Involved in chromosome partitioning
VIC01_RS18185	COG1475	DNA binding
VIC01_RS18195	COG1388	LysM domain
VIC01_RS18195	COG1705	Flagellar rod assembly protein muramidase FlgJ
VIC01_RS18215	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
VIC01_RS18235	COG0742	ribosomal rna small subunit methyltransferase
VIC01_RS18240	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
VIC01_RS18255	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
VIC01_RS18280	COG0588	phosphoglycerate mutase activity
VIC01_RS18285	COG1830	Aldolase
VIC01_RS18300	COG1108	ABC-type Mn2 Zn2 transport systems permease components
VIC01_RS18305	COG0802	atpase or kinase
VIC01_RS18335	COG0688	phosphatidylethanolamine metabolic process
VIC01_RS18340	COG1183	phosphatidylcholine synthase activity
VIC01_RS18360	COG0792	nuclease activity
VIC01_RS18370	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
VIC01_RS18370	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
VIC01_RS18380	COG0534	Mate efflux family protein
VIC01_RS18385	COG0528	UMP kinase activity
VIC01_RS18390	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
VIC01_RS18415	COG0233	cytoplasmic translational termination
VIC01_RS18420	COG1162	GTPase activity
VIC01_RS18425	COG2234	aminopeptidase activity
VIC01_RS18435	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VIC01_RS18445	COG0531	amino acid
VIC01_RS18455	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
VIC01_RS18455	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
VIC01_RS18470	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
VIC01_RS18480	COG4771	TonB-dependent receptor
VIC01_RS18485	COG4974	Belongs to the 'phage' integrase family
VIC01_RS18490	COG4206	TonB-dependent receptor
VIC01_RS18490	COG1629	transport
VIC01_RS18500	COG1629	transport
VIC01_RS18510	COG1629	transport
VIC01_RS18510	COG4206	TonB-dependent receptor
VIC01_RS18530	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
VIC01_RS18535	COG1435	thymidine kinase activity
VIC01_RS18560	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
VIC01_RS18565	COG0470	DNA polymerase III
VIC01_RS18570	COG1774	PSP1 C-terminal conserved region
VIC01_RS18580	COG0772	Belongs to the SEDS family
VIC01_RS18585	COG0768	penicillin binding
VIC01_RS18605	COG0138	bifunctional purine biosynthesis protein purh
VIC01_RS18620	COG0823	Involved in the tonB-independent uptake of proteins
VIC01_RS18620	COG1506	peptidase
VIC01_RS18630	COG3292	Two component regulator propeller
VIC01_RS18630	COG2205	protein histidine kinase activity
VIC01_RS18630	COG0745	RESPONSE REGULATOR receiver
VIC01_RS18635	COG2755	lipolytic protein G-D-S-L family
VIC01_RS18650	COG1917	Cupin 2, conserved barrel domain protein
VIC01_RS18670	COG1262	PFAM Formylglycine-generating sulfatase enzyme
VIC01_RS18670	COG0515	serine threonine protein kinase
VIC01_RS18680	COG1629	transport
VIC01_RS18690	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
VIC01_RS18695	COG3775	system Galactitol-specific IIC component
VIC01_RS18700	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
VIC01_RS18705	COG2271	Major facilitator Superfamily
VIC01_RS18730	COG1012	belongs to the aldehyde dehydrogenase family
VIC01_RS18735	COG0745	RESPONSE REGULATOR receiver
VIC01_RS18735	COG2205	protein histidine kinase activity
VIC01_RS18735	COG3292	Two component regulator propeller
VIC01_RS18750	COG0702	epimerase
VIC01_RS18755	COG4771	TonB-dependent receptor
VIC01_RS18795	COG4206	TonB-dependent receptor
VIC01_RS18795	COG1629	transport
VIC01_RS18800	COG0702	epimerase
VIC01_RS18805	COG3119	arylsulfatase activity
VIC01_RS18835	COG3250	beta-galactosidase activity
VIC01_RS18850	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
VIC01_RS18860	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
VIC01_RS18865	COG0569	domain protein
VIC01_RS18870	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
VIC01_RS18880	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
VIC01_RS18885	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
VIC01_RS18890	COG0649	NAD binding
VIC01_RS18895	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
VIC01_RS18900	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
VIC01_RS18905	COG0839	Belongs to the complex I subunit 6 family
VIC01_RS18915	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
VIC01_RS18920	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
VIC01_RS18925	COG1007	ATP synthesis coupled electron transport
VIC01_RS18930	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
VIC01_RS19025	COG4413	Urea transporter
VIC01_RS19030	COG0776	regulation of translation
VIC01_RS19145	COG4771	TonB-dependent receptor
VIC01_RS19170	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
VIC01_RS19225	COG2706	6-phosphogluconolactonase activity
VIC01_RS19230	COG1482	cell wall glycoprotein biosynthetic process
VIC01_RS19280	COG0138	bifunctional purine biosynthesis protein purh
VIC01_RS19315	COG1496	oxidoreductase activity
VIC01_RS19320	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
VIC01_RS19325	COG0563	adenylate kinase activity
VIC01_RS19330	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
VIC01_RS19335	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
VIC01_RS19335	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
VIC01_RS19380	COG0191	fructose-bisphosphate aldolase activity
VIC01_RS19385	COG0254	rRNA binding
VIC01_RS19395	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
VIC01_RS19405	COG3292	Two component regulator propeller
VIC01_RS19405	COG2205	protein histidine kinase activity
VIC01_RS19405	COG0745	RESPONSE REGULATOR receiver
VIC01_RS19410	COG1105	Belongs to the carbohydrate kinase PfkB family
VIC01_RS19420	COG1621	beta-fructofuranosidase activity
VIC01_RS19435	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
VIC01_RS19440	COG0673	inositol 2-dehydrogenase activity
VIC01_RS19445	COG0632	four-way junction helicase activity
VIC01_RS19455	COG0617	tRNA 3'-terminal CCA addition
VIC01_RS19460	COG1272	protein, Hemolysin III
VIC01_RS19475	COG0750	zinc metalloprotease
VIC01_RS19480	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
VIC01_RS19485	COG0739	heme binding
VIC01_RS19490	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
VIC01_RS19495	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
VIC01_RS19515	COG0194	GDP metabolic process
VIC01_RS19525	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
VIC01_RS19535	COG1408	metallophosphoesterase
VIC01_RS19540	COG1575	Belongs to the MenA family. Type 1 subfamily
VIC01_RS19545	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
VIC01_RS19550	COG0179	Fumarylacetoacetate (FAA) hydrolase
VIC01_RS19555	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
VIC01_RS19565	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
VIC01_RS19570	COG0052	Belongs to the universal ribosomal protein uS2 family
VIC01_RS19575	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
VIC01_RS19580	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
VIC01_RS19600	COG0017	Asparaginyl-tRNA synthetase
VIC01_RS19605	COG1187	pseudouridine synthase activity
VIC01_RS19615	COG0534	Mate efflux family protein
VIC01_RS19635	COG1131	(ABC) transporter
VIC01_RS19665	COG0811	peptide transport
VIC01_RS19710	COG1929	Belongs to the glycerate kinase type-1 family
VIC01_RS19725	COG0616	signal peptide processing
VIC01_RS19730	COG1663	tetraacyldisaccharide 4'-kinase activity
VIC01_RS19735	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
VIC01_RS19740	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
VIC01_RS19765	COG0546	phosphoglycolate phosphatase activity
VIC01_RS19770	COG0110	maltose O-acetyltransferase activity
VIC01_RS19795	COG3328	transposase activity
VIC01_RS19815	COG1785	Belongs to the alkaline phosphatase family
VIC01_RS19825	COG0733	neurotransmitter:sodium symporter activity
VIC01_RS19845	COG2954	triphosphatase activity
VIC01_RS19855	COG1022	Amp-dependent synthetase and ligase
VIC01_RS19900	COG1519	Transferase
VIC01_RS19905	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
VIC01_RS19915	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
VIC01_RS19920	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
VIC01_RS19925	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
VIC01_RS19940	COG2096	Adenosyltransferase
VIC01_RS19955	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
VIC01_RS19965	COG0439	Biotin carboxylase
VIC01_RS19970	COG3189	MarR family transcriptional regulator
VIC01_RS19980	COG3153	acetyltransferase
VIC01_RS20025	COG4974	Belongs to the 'phage' integrase family
VIC01_RS20035	COG1846	Transcriptional regulator
VIC01_RS20100	COG0662	Cupin 2, conserved barrel domain protein
VIC01_RS20100	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
VIC01_RS20110	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
VIC01_RS20125	COG1773	rubredoxin
VIC01_RS20130	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
VIC01_RS20135	COG0545	Peptidyl-prolyl cis-trans isomerase
VIC01_RS20140	COG0545	Peptidyl-prolyl cis-trans isomerase
VIC01_RS20150	COG1283	sodium-dependent phosphate transmembrane transporter activity
VIC01_RS20155	COG0572	uridine kinase
VIC01_RS20165	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
VIC01_RS20185	COG0509	glycine decarboxylation via glycine cleavage system
VIC01_RS20190	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
VIC01_RS20195	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
VIC01_RS20200	COG2066	Belongs to the glutaminase family
VIC01_RS20205	COG0724	RNA recognition motif
VIC01_RS20230	COG3063	Type IV pilus biogenesis stability protein PilW
VIC01_RS20235	COG0756	dUTP diphosphatase activity
VIC01_RS20260	COG2001	Belongs to the MraZ family
VIC01_RS20265	COG0275	rRNA processing
VIC01_RS20275	COG0768	penicillin binding
VIC01_RS20280	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
VIC01_RS20285	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
VIC01_RS20290	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
VIC01_RS20295	COG0772	Belongs to the SEDS family
VIC01_RS20300	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
VIC01_RS20305	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
VIC01_RS20315	COG0849	cell division
VIC01_RS20320	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
VIC01_RS20330	COG1381	Involved in DNA repair and RecF pathway recombination
VIC01_RS20340	COG0268	Binds directly to 16S ribosomal RNA
VIC01_RS20345	COG0187	DNA topoisomerase II activity
VIC01_RS20350	COG1640	4-alpha-glucanotransferase
VIC01_RS20375	COG0366	Alpha amylase catalytic
VIC01_RS20380	COG1082	Xylose isomerase domain protein TIM barrel
VIC01_RS20390	COG4206	TonB-dependent receptor
VIC01_RS20390	COG1629	transport
VIC01_RS20395	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
VIC01_RS20435	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
VIC01_RS20450	COG2407	Converts the aldose L-fucose into the corresponding ketose L-fuculose
VIC01_RS20455	COG0738	Major facilitator superfamily
VIC01_RS20460	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
VIC01_RS20470	COG1629	transport
VIC01_RS20470	COG4206	TonB-dependent receptor
VIC01_RS20475	COG0702	epimerase
VIC01_RS20485	COG2431	L-lysine efflux transmembrane transporter activity
VIC01_RS20490	COG3250	beta-galactosidase activity
VIC01_RS20495	COG3408	Glycogen debranching enzyme
VIC01_RS20495	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
VIC01_RS20510	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
VIC01_RS20515	COG0719	Fe-S assembly protein
VIC01_RS20520	COG0396	ATPase activity
VIC01_RS20525	COG0719	Fe-S assembly protein
VIC01_RS20535	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
VIC01_RS20540	COG0195	Participates in both transcription termination and antitermination
VIC01_RS20545	COG0779	Required for maturation of 30S ribosomal subunits
VIC01_RS20555	COG2814	Major facilitator Superfamily
VIC01_RS20595	COG3458	cephalosporin-C deacetylase activity
VIC01_RS20615	COG1595	DNA-templated transcription, initiation
VIC01_RS20620	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
VIC01_RS20625	COG1166	arginine decarboxylase activity
VIC01_RS20630	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
VIC01_RS20650	COG2816	NAD+ diphosphatase activity
VIC01_RS20655	COG1253	flavin adenine dinucleotide binding
VIC01_RS20665	COG1522	sequence-specific DNA binding
VIC01_RS20715	COG0745	RESPONSE REGULATOR receiver
VIC01_RS21025	COG3426	butyrate kinase activity
VIC01_RS21030	COG0280	phosphate acetyltransferase
VIC01_RS21035	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
VIC01_RS21045	COG2166	iron-sulfur cluster assembly
VIC01_RS21070	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
VIC01_RS21130	COG0210	DNA helicase
VIC01_RS21205	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
VIC01_RS21210	COG1011	Hydrolase
VIC01_RS21215	COG0196	riboflavin kinase activity
VIC01_RS21235	COG1266	CAAX protease self-immunity
VIC01_RS21255	COG3655	Transcriptional regulator
VIC01_RS21265	COG3591	Belongs to the peptidase S1B family
VIC01_RS21280	COG2255	four-way junction helicase activity
VIC01_RS21285	COG4974	Belongs to the 'phage' integrase family
VIC01_RS21370	COG0482	sulfurtransferase activity
VIC01_RS21375	COG0308	aminopeptidase N
VIC01_RS21395	COG0517	IMP dehydrogenase activity
VIC01_RS21395	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
VIC01_RS21405	COG0612	Peptidase, M16
VIC01_RS21415	COG3292	Two component regulator propeller
VIC01_RS21415	COG0745	RESPONSE REGULATOR receiver
VIC01_RS21415	COG2205	protein histidine kinase activity
VIC01_RS21415	COG2205	protein histidine kinase activity
VIC01_RS21415	COG3292	Two component regulator propeller
VIC01_RS21415	COG0745	RESPONSE REGULATOR receiver
VIC01_RS21420	COG3119	arylsulfatase activity
VIC01_RS21430	COG4771	TonB-dependent receptor
VIC01_RS21435	COG1312	Catalyzes the dehydration of D-mannonate
VIC01_RS21440	COG1028	Short-chain dehydrogenase reductase Sdr
VIC01_RS21450	COG0681	Belongs to the peptidase S26 family
VIC01_RS21455	COG0681	Belongs to the peptidase S26 family
VIC01_RS21460	COG0289	4-hydroxy-tetrahydrodipicolinate reductase